##gff-version 3
#!gff-spec-version 1.21
#!processor NCBI annotwriter
#!genome-build ASM62747v1
#!genome-build-accession NCBI_Assembly:GCF_000627475.1
#!annotation-date 06/14/2025 09:59:13
#!annotation-source NCBI RefSeq GCF_000627475.1-RS_2025_06_14
##sequence-region NZ_JJLS01000001.1 1 3058
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000001.1	RefSeq	region	1	3058	.	+	.	ID=NZ_JJLS01000001.1:1..3058;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000001.1	RefSeq	gene	1	1215	.	-	.	ID=gene-AC56_RS24330;Name=AC56_RS24330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS24330;old_locus_tag=AC56_4945;partial=true;start_range=.,1
NZ_JJLS01000001.1	Protein Homology	CDS	1	1215	.	-	0	ID=cds-WP_032282434.1;Parent=gene-AC56_RS24330;Dbxref=GenBank:WP_032282434.1;Name=WP_032282434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707867.1;locus_tag=AC56_RS24330;partial=true;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=WP_032282434.1;start_range=.,1;transl_table=11
NZ_JJLS01000001.1	RefSeq	gene	1199	1369	.	-	.	ID=gene-AC56_RS0124335;Name=AC56_RS0124335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0124335;old_locus_tag=AC56_4946
NZ_JJLS01000001.1	Protein Homology	CDS	1199	1369	.	-	0	ID=cds-WP_000497751.1;Parent=gene-AC56_RS0124335;Dbxref=GenBank:WP_000497751.1;Name=WP_000497751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000497758.1;locus_tag=AC56_RS0124335;product=DUF2635 domain-containing protein;protein_id=WP_000497751.1;transl_table=11
NZ_JJLS01000001.1	RefSeq	gene	1378	1938	.	-	.	ID=gene-AC56_RS24325;Name=AC56_RS24325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS24325;old_locus_tag=AC56_4947
NZ_JJLS01000001.1	Protein Homology	CDS	1378	1938	.	-	0	ID=cds-WP_032282435.1;Parent=gene-AC56_RS24325;Dbxref=GenBank:WP_032282435.1;Name=WP_032282435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016244984.1;locus_tag=AC56_RS24325;product=phage tail terminator protein;protein_id=WP_032282435.1;transl_table=11
NZ_JJLS01000001.1	RefSeq	pseudogene	1935	2434	.	-	.	ID=gene-AC56_RS24320;Name=AC56_RS24320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS24320;old_locus_tag=AC56_4948;pseudo=true
NZ_JJLS01000001.1	Protein Homology	CDS	1935	2434	.	-	0	ID=cds-AC56_RS24320;Parent=gene-AC56_RS24320;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001501060.1;locus_tag=AC56_RS24320;product=hypothetical protein;pseudo=true;transl_table=11
NZ_JJLS01000001.1	RefSeq	gene	2409	2819	.	-	.	ID=gene-AC56_RS24315;Name=AC56_RS24315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS24315;old_locus_tag=AC56_4949
NZ_JJLS01000001.1	Protein Homology	CDS	2409	2819	.	-	0	ID=cds-WP_032277688.1;Parent=gene-AC56_RS24315;Dbxref=GenBank:WP_032277688.1;Name=WP_032277688.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000702387.1;locus_tag=AC56_RS24315;product=phage head closure protein;protein_id=WP_032277688.1;transl_table=11
NZ_JJLS01000001.1	RefSeq	gene	2901	3058	.	+	.	ID=gene-AC56_RS27985;Name=AC56_RS27985;end_range=3058,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS27985;old_locus_tag=AC56_4950;partial=true
NZ_JJLS01000001.1	Protein Homology	CDS	2901	3058	.	+	0	ID=cds-WP_001392526.1;Parent=gene-AC56_RS27985;Dbxref=GenBank:WP_001392526.1;Name=WP_001392526.1;Ontology_term=GO:0006313;end_range=3058,.;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS27985;partial=true;product=IS1 family transposase;protein_id=WP_001392526.1;transl_table=11
##sequence-region NZ_JJLS01000002.1 1 2047
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000002.1	RefSeq	region	1	2047	.	+	.	ID=NZ_JJLS01000002.1:1..2047;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000002.1	RefSeq	gene	1	69	.	+	.	ID=gene-AC56_RS32520;Name=AC56_RS32520;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS32520;old_locus_tag=AC56_4951
NZ_JJLS01000002.1	tRNAscan-SE	tRNA	1	69	.	+	.	ID=rna-AC56_RS32520;Parent=gene-AC56_RS32520;anticodon=(pos:27..29);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS32520;product=tRNA-Met
NZ_JJLS01000002.1	tRNAscan-SE	exon	1	69	.	+	.	ID=exon-AC56_RS32520-1;Parent=rna-AC56_RS32520;anticodon=(pos:27..29);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS32520;product=tRNA-Met
NZ_JJLS01000002.1	RefSeq	gene	78	162	.	+	.	ID=gene-AC56_RS24310;Name=AC56_RS24310;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS24310;old_locus_tag=AC56_4952
NZ_JJLS01000002.1	tRNAscan-SE	tRNA	78	162	.	+	.	ID=rna-AC56_RS24310;Parent=gene-AC56_RS24310;anticodon=(pos:112..114);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS24310;product=tRNA-Leu
NZ_JJLS01000002.1	tRNAscan-SE	exon	78	162	.	+	.	ID=exon-AC56_RS24310-1;Parent=rna-AC56_RS24310;anticodon=(pos:112..114);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS24310;product=tRNA-Leu
NZ_JJLS01000002.1	RefSeq	gene	186	260	.	+	.	ID=gene-AC56_RS24305;Name=AC56_RS24305;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS24305;old_locus_tag=AC56_4953
NZ_JJLS01000002.1	tRNAscan-SE	tRNA	186	260	.	+	.	ID=rna-AC56_RS24305;Parent=gene-AC56_RS24305;anticodon=(pos:218..220);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS24305;product=tRNA-Gln
NZ_JJLS01000002.1	tRNAscan-SE	exon	186	260	.	+	.	ID=exon-AC56_RS24305-1;Parent=rna-AC56_RS24305;anticodon=(pos:218..220);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS24305;product=tRNA-Gln
NZ_JJLS01000002.1	RefSeq	gene	276	352	.	+	.	ID=gene-AC56_RS24300;Name=AC56_RS24300;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS24300;old_locus_tag=AC56_4954
NZ_JJLS01000002.1	tRNAscan-SE	tRNA	276	352	.	+	.	ID=rna-AC56_RS24300;Parent=gene-AC56_RS24300;anticodon=(pos:310..312);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS24300;product=tRNA-Met
NZ_JJLS01000002.1	tRNAscan-SE	exon	276	352	.	+	.	ID=exon-AC56_RS24300-1;Parent=rna-AC56_RS24300;anticodon=(pos:310..312);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS24300;product=tRNA-Met
NZ_JJLS01000002.1	RefSeq	gene	400	474	.	+	.	ID=gene-AC56_RS24295;Name=AC56_RS24295;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS24295;old_locus_tag=AC56_4956
NZ_JJLS01000002.1	tRNAscan-SE	tRNA	400	474	.	+	.	ID=rna-AC56_RS24295;Parent=gene-AC56_RS24295;anticodon=(pos:432..434);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS24295;product=tRNA-Gln
NZ_JJLS01000002.1	tRNAscan-SE	exon	400	474	.	+	.	ID=exon-AC56_RS24295-1;Parent=rna-AC56_RS24295;anticodon=(pos:432..434);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS24295;product=tRNA-Gln
NZ_JJLS01000002.1	RefSeq	gene	628	1803	.	-	.	ID=gene-AC56_RS24290;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=AC56_RS24290;old_locus_tag=AC56_4957
NZ_JJLS01000002.1	Protein Homology	CDS	628	1803	.	-	0	ID=cds-WP_000184541.1;Parent=gene-AC56_RS24290;Dbxref=GenBank:WP_000184541.1;Name=WP_000184541.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiF;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415195.1;locus_tag=AC56_RS24290;product=3-demethoxyubiquinol 3-hydroxylase;protein_id=WP_000184541.1;transl_table=11
NZ_JJLS01000002.1	RefSeq	gene	1949	2047	.	+	.	ID=gene-AC56_RS24285;Name=AC56_RS24285;end_range=2047,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS24285;old_locus_tag=AC56_4958;partial=true
NZ_JJLS01000002.1	Protein Homology	CDS	1949	2047	.	+	0	ID=cds-WP_032202135.1;Parent=gene-AC56_RS24285;Dbxref=GenBank:WP_032202135.1;Name=WP_032202135.1;end_range=2047,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308726.1;locus_tag=AC56_RS24285;partial=true;product=tRNA methyltransferase;protein_id=WP_032202135.1;transl_table=11
##sequence-region NZ_JJLS01000003.1 1 12435
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000003.1	RefSeq	region	1	12435	.	+	.	ID=NZ_JJLS01000003.1:1..12435;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000003.1	RefSeq	pseudogene	1	249	.	+	.	ID=gene-AC56_RS24280;Name=AC56_RS24280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS24280;old_locus_tag=AC56_4959;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000003.1	Protein Homology	CDS	1	249	.	+	0	ID=cds-AC56_RS24280;Parent=gene-AC56_RS24280;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS24280;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000003.1	RefSeq	pseudogene	293	484	.	+	.	ID=gene-AC56_RS0124340;Name=AC56_RS0124340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0124340;old_locus_tag=AC56_4960;partial=true;pseudo=true;start_range=.,293
NZ_JJLS01000003.1	Protein Homology	CDS	293	484	.	+	0	ID=cds-AC56_RS0124340;Parent=gene-AC56_RS0124340;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312405.1;locus_tag=AC56_RS0124340;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,293;transl_table=11
NZ_JJLS01000003.1	RefSeq	gene	526	1173	.	-	.	ID=gene-AC56_RS24275;Name=AC56_RS24275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS24275;old_locus_tag=AC56_4961
NZ_JJLS01000003.1	Protein Homology	CDS	526	1173	.	-	0	ID=cds-WP_001296814.1;Parent=gene-AC56_RS24275;Dbxref=GenBank:WP_001296814.1;Name=WP_001296814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417965.1;locus_tag=AC56_RS24275;product=MgtC/SapB family protein;protein_id=WP_001296814.1;transl_table=11
NZ_JJLS01000003.1	RefSeq	gene	1237	1563	.	-	.	ID=gene-AC56_RS24270;Name=hdeB;gbkey=Gene;gene=hdeB;gene_biotype=protein_coding;locus_tag=AC56_RS24270;old_locus_tag=AC56_4962
NZ_JJLS01000003.1	Protein Homology	CDS	1237	1563	.	-	0	ID=cds-WP_001298717.1;Parent=gene-AC56_RS24270;Dbxref=GenBank:WP_001298717.1;Name=WP_001298717.1;gbkey=CDS;gene=hdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417966.4;locus_tag=AC56_RS24270;product=acid-activated periplasmic chaperone HdeB;protein_id=WP_001298717.1;transl_table=11
NZ_JJLS01000003.1	RefSeq	gene	1679	2011	.	-	.	ID=gene-AC56_RS24265;Name=hdeA;gbkey=Gene;gene=hdeA;gene_biotype=protein_coding;locus_tag=AC56_RS24265;old_locus_tag=AC56_4963
NZ_JJLS01000003.1	Protein Homology	CDS	1679	2011	.	-	0	ID=cds-WP_000756550.1;Parent=gene-AC56_RS24265;Dbxref=GenBank:WP_000756550.1;Name=WP_000756550.1;gbkey=CDS;gene=hdeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312417.1;locus_tag=AC56_RS24265;product=acid-activated periplasmic chaperone HdeA;protein_id=WP_000756550.1;transl_table=11
NZ_JJLS01000003.1	RefSeq	gene	2266	2838	.	+	.	ID=gene-AC56_RS24260;Name=hdeD;gbkey=Gene;gene=hdeD;gene_biotype=protein_coding;locus_tag=AC56_RS24260;old_locus_tag=AC56_4964
NZ_JJLS01000003.1	Protein Homology	CDS	2266	2838	.	+	0	ID=cds-WP_000965672.1;Parent=gene-AC56_RS24260;Dbxref=GenBank:WP_000965672.1;Name=WP_000965672.1;gbkey=CDS;gene=hdeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312418.1;locus_tag=AC56_RS24260;product=acid-resistance protein HdeD;protein_id=WP_000965672.1;transl_table=11
NZ_JJLS01000003.1	RefSeq	gene	3637	4164	.	+	.	ID=gene-AC56_RS24255;Name=gadE;gbkey=Gene;gene=gadE;gene_biotype=protein_coding;locus_tag=AC56_RS24255;old_locus_tag=AC56_4965
NZ_JJLS01000003.1	Protein Homology	CDS	3637	4164	.	+	0	ID=cds-WP_000576690.1;Parent=gene-AC56_RS24255;Dbxref=GenBank:WP_000576690.1;Name=WP_000576690.1;gbkey=CDS;gene=gadE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312419.1;locus_tag=AC56_RS24255;product=acid resistance transcriptional activator GadE;protein_id=WP_000576690.1;transl_table=11
NZ_JJLS01000003.1	RefSeq	gene	4165	4443	.	-	.	ID=gene-AC56_RS0124345;Name=AC56_RS0124345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0124345
NZ_JJLS01000003.1	Protein Homology	CDS	4165	4443	.	-	0	ID=cds-WP_001205329.1;Parent=gene-AC56_RS0124345;Dbxref=GenBank:WP_001205329.1;Name=WP_001205329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439288.1;locus_tag=AC56_RS0124345;product=hypothetical protein;protein_id=WP_001205329.1;transl_table=11
NZ_JJLS01000003.1	RefSeq	gene	4551	5660	.	+	.	ID=gene-AC56_RS24250;Name=mdtE;gbkey=Gene;gene=mdtE;gene_biotype=protein_coding;locus_tag=AC56_RS24250;old_locus_tag=AC56_4966
NZ_JJLS01000003.1	Protein Homology	CDS	4551	5660	.	+	0	ID=cds-WP_001340474.1;Parent=gene-AC56_RS24250;Dbxref=GenBank:WP_001340474.1;Name=WP_001340474.1;gbkey=CDS;gene=mdtE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001081792.1;locus_tag=AC56_RS24250;product=multidrug transporter subunit MdtE;protein_id=WP_001340474.1;transl_table=11
NZ_JJLS01000003.1	RefSeq	gene	5685	8798	.	+	.	ID=gene-AC56_RS24245;Name=mdtF;gbkey=Gene;gene=mdtF;gene_biotype=protein_coding;locus_tag=AC56_RS24245;old_locus_tag=AC56_4967
NZ_JJLS01000003.1	Protein Homology	CDS	5685	8798	.	+	0	ID=cds-WP_001506351.1;Parent=gene-AC56_RS24245;Dbxref=GenBank:WP_001506351.1;Name=WP_001506351.1;gbkey=CDS;gene=mdtF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417971.1;locus_tag=AC56_RS24245;product=multidrug efflux pump RND permease MdtF;protein_id=WP_001506351.1;transl_table=11
NZ_JJLS01000003.1	RefSeq	gene	9161	9889	.	-	.	ID=gene-AC56_RS24240;Name=gadW;gbkey=Gene;gene=gadW;gene_biotype=protein_coding;locus_tag=AC56_RS24240;old_locus_tag=AC56_4968
NZ_JJLS01000003.1	Protein Homology	CDS	9161	9889	.	-	0	ID=cds-WP_000149999.1;Parent=gene-AC56_RS24240;Dbxref=GenBank:WP_000149999.1;Name=WP_000149999.1;gbkey=CDS;gene=gadW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312422.1;locus_tag=AC56_RS24240;product=acid resistance transcriptional activator GadW;protein_id=WP_000149999.1;transl_table=11
NZ_JJLS01000003.1	RefSeq	gene	10257	11081	.	-	.	ID=gene-AC56_RS24235;Name=gadX;gbkey=Gene;gene=gadX;gene_biotype=protein_coding;locus_tag=AC56_RS24235;old_locus_tag=AC56_4969
NZ_JJLS01000003.1	Protein Homology	CDS	10257	11081	.	-	0	ID=cds-WP_001191059.1;Parent=gene-AC56_RS24235;Dbxref=GenBank:WP_001191059.1;Name=WP_001191059.1;gbkey=CDS;gene=gadX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417973.1;locus_tag=AC56_RS24235;product=acid resistance transcriptional activator GadX;protein_id=WP_001191059.1;transl_table=11
NZ_JJLS01000003.1	RefSeq	gene	11451	12435	.	-	.	ID=gene-AC56_RS24230;Name=AC56_RS24230;end_range=12435,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS24230;old_locus_tag=AC56_4970;partial=true
NZ_JJLS01000003.1	Protein Homology	CDS	11451	12435	.	-	1	ID=cds-WP_032282439.1;Parent=gene-AC56_RS24230;Dbxref=GenBank:WP_032282439.1;Name=WP_032282439.1;Ontology_term=GO:0006540,GO:0004351,GO:0030170;end_range=12435,.;gbkey=CDS;go_function=glutamate decarboxylase activity|0004351||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyrate shunt|0006540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310125.1;locus_tag=AC56_RS24230;partial=true;product=glutamate decarboxylase;protein_id=WP_032282439.1;transl_table=11
##sequence-region NZ_JJLS01000004.1 1 3771
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000004.1	RefSeq	region	1	3771	.	+	.	ID=NZ_JJLS01000004.1:1..3771;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000004.1	RefSeq	gene	1	460	.	+	.	ID=gene-AC56_RS0124350;Name=bglJ;gbkey=Gene;gene=bglJ;gene_biotype=protein_coding;locus_tag=AC56_RS0124350;old_locus_tag=AC56_4971;partial=true;start_range=.,1
NZ_JJLS01000004.1	Protein Homology	CDS	1	460	.	+	1	ID=cds-WP_032209719.1;Parent=gene-AC56_RS0124350;Dbxref=GenBank:WP_032209719.1;Name=WP_032209719.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=bglJ;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418786.4;locus_tag=AC56_RS0124350;partial=true;product=DNA-binding transcriptional activator BglJ;protein_id=WP_032209719.1;start_range=.,1;transl_table=11
NZ_JJLS01000004.1	RefSeq	gene	498	1286	.	-	.	ID=gene-AC56_RS24225;Name=fhuF;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=AC56_RS24225;old_locus_tag=AC56_4972
NZ_JJLS01000004.1	Protein Homology	CDS	498	1286	.	-	0	ID=cds-WP_000331559.1;Parent=gene-AC56_RS24225;Dbxref=GenBank:WP_000331559.1;Name=WP_000331559.1;Ontology_term=GO:0051537;gbkey=CDS;gene=fhuF;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710108.1;locus_tag=AC56_RS24225;product=siderophore-iron reductase FhuF;protein_id=WP_000331559.1;transl_table=11
NZ_JJLS01000004.1	RefSeq	gene	1427	1663	.	+	.	ID=gene-AC56_RS24220;Name=AC56_RS24220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS24220;old_locus_tag=AC56_4973
NZ_JJLS01000004.1	Protein Homology	CDS	1427	1663	.	+	0	ID=cds-WP_001403902.1;Parent=gene-AC56_RS24220;Dbxref=GenBank:WP_001403902.1;Name=WP_001403902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313355.3;locus_tag=AC56_RS24220;product=DUF1435 domain-containing protein;protein_id=WP_001403902.1;transl_table=11
NZ_JJLS01000004.1	RefSeq	gene	1702	1788	.	-	.	ID=gene-AC56_RS24215;Name=AC56_RS24215;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS24215;old_locus_tag=AC56_4974
NZ_JJLS01000004.1	tRNAscan-SE	tRNA	1702	1788	.	-	.	ID=rna-AC56_RS24215;Parent=gene-AC56_RS24215;anticodon=(pos:complement(1752..1754));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS24215;product=tRNA-Leu
NZ_JJLS01000004.1	tRNAscan-SE	exon	1702	1788	.	-	.	ID=exon-AC56_RS24215-1;Parent=rna-AC56_RS24215;anticodon=(pos:complement(1752..1754));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS24215;product=tRNA-Leu
NZ_JJLS01000004.1	RefSeq	gene	1823	1909	.	-	.	ID=gene-AC56_RS24210;Name=AC56_RS24210;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS24210;old_locus_tag=AC56_4975
NZ_JJLS01000004.1	tRNAscan-SE	tRNA	1823	1909	.	-	.	ID=rna-AC56_RS24210;Parent=gene-AC56_RS24210;anticodon=(pos:complement(1873..1875));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS24210;product=tRNA-Leu
NZ_JJLS01000004.1	tRNAscan-SE	exon	1823	1909	.	-	.	ID=exon-AC56_RS24210-1;Parent=rna-AC56_RS24210;anticodon=(pos:complement(1873..1875));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS24210;product=tRNA-Leu
NZ_JJLS01000004.1	RefSeq	gene	1938	2024	.	-	.	ID=gene-AC56_RS24205;Name=AC56_RS24205;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS24205;old_locus_tag=AC56_4976
NZ_JJLS01000004.1	tRNAscan-SE	tRNA	1938	2024	.	-	.	ID=rna-AC56_RS24205;Parent=gene-AC56_RS24205;anticodon=(pos:complement(1988..1990));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS24205;product=tRNA-Leu
NZ_JJLS01000004.1	tRNAscan-SE	exon	1938	2024	.	-	.	ID=exon-AC56_RS24205-1;Parent=rna-AC56_RS24205;anticodon=(pos:complement(1988..1990));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS24205;product=tRNA-Leu
NZ_JJLS01000004.1	RefSeq	gene	2333	3364	.	-	.	ID=gene-AC56_RS24200;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=AC56_RS24200;old_locus_tag=AC56_4977
NZ_JJLS01000004.1	Protein Homology	CDS	2333	3364	.	-	0	ID=cds-WP_001272323.1;Parent=gene-AC56_RS24200;Dbxref=GenBank:WP_001272323.1;Name=WP_001272323.1;Ontology_term=GO:0006364,GO:0003676,GO:0008990;gbkey=CDS;gene=rsmC;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313356.1;locus_tag=AC56_RS24200;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=WP_001272323.1;transl_table=11
NZ_JJLS01000004.1	RefSeq	gene	3467	3771	.	+	.	ID=gene-AC56_RS24195;Name=holD;end_range=3771,.;gbkey=Gene;gene=holD;gene_biotype=protein_coding;locus_tag=AC56_RS24195;old_locus_tag=AC56_4978;partial=true
NZ_JJLS01000004.1	Protein Homology	CDS	3467	3771	.	+	0	ID=cds-WP_032282440.1;Parent=gene-AC56_RS24195;Dbxref=GenBank:WP_032282440.1;Name=WP_032282440.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408,GO:0009360;end_range=3771,.;gbkey=CDS;gene=holD;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313357.1;locus_tag=AC56_RS24195;partial=true;product=DNA polymerase III subunit psi;protein_id=WP_032282440.1;transl_table=11
##sequence-region NZ_JJLS01000005.1 1 1890
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000005.1	RefSeq	region	1	1890	.	+	.	ID=NZ_JJLS01000005.1:1..1890;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000005.1	RefSeq	gene	1	900	.	-	.	ID=gene-AC56_RS24190;Name=AC56_RS24190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS24190;old_locus_tag=AC56_4979;partial=true;start_range=.,1
NZ_JJLS01000005.1	Protein Homology	CDS	1	900	.	-	0	ID=cds-WP_032282441.1;Parent=gene-AC56_RS24190;Dbxref=GenBank:WP_032282441.1;Name=WP_032282441.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AC56_RS24190;partial=true;product=ISAs1-like element ISEc1 family transposase;protein_id=WP_032282441.1;start_range=.,1;transl_table=11
NZ_JJLS01000005.1	RefSeq	pseudogene	1031	1174	.	-	.	ID=gene-AC56_RS31725;Name=AC56_RS31725;end_range=1174,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS31725;partial=true;pseudo=true
NZ_JJLS01000005.1	Protein Homology	CDS	1031	1174	.	-	0	ID=cds-AC56_RS31725;Parent=gene-AC56_RS31725;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1174,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AC56_RS31725;partial=true;product=ISAs1 family transposase;pseudo=true;transl_table=11
NZ_JJLS01000005.1	RefSeq	gene	1181	1878	.	-	.	ID=gene-AC56_RS24185;Name=AC56_RS24185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS24185;old_locus_tag=AC56_4980
NZ_JJLS01000005.1	Protein Homology	CDS	1629	1878	.	-	0	ID=cds-WP_224223467.1;Parent=gene-AC56_RS24185;Dbxref=GenBank:WP_224223467.1;Name=WP_224223467.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS24185;product=IS1 family transposase;protein_id=WP_224223467.1;transl_table=11
NZ_JJLS01000005.1	Protein Homology	CDS	1181	1629	.	-	2	ID=cds-WP_224223467.1;Parent=gene-AC56_RS24185;Dbxref=GenBank:WP_224223467.1;Name=WP_224223467.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS24185;product=IS1 family transposase;protein_id=WP_224223467.1;transl_table=11
##sequence-region NZ_JJLS01000006.1 1 6146
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000006.1	RefSeq	region	1	6146	.	+	.	ID=NZ_JJLS01000006.1:1..6146;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000006.1	RefSeq	gene	1	385	.	+	.	ID=gene-AC56_RS24180;Name=AC56_RS24180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS24180;old_locus_tag=AC56_4981;partial=true;start_range=.,1
NZ_JJLS01000006.1	Protein Homology	CDS	1	385	.	+	1	ID=cds-WP_024206598.1;Parent=gene-AC56_RS24180;Dbxref=GenBank:WP_024206598.1;Name=WP_024206598.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AC56_RS24180;partial=true;product=IS3 family transposase;protein_id=WP_024206598.1;start_range=.,1;transl_table=11
NZ_JJLS01000006.1	RefSeq	gene	566	1423	.	-	.	ID=gene-AC56_RS24175;Name=sitD;gbkey=Gene;gene=sitD;gene_biotype=protein_coding;locus_tag=AC56_RS24175;old_locus_tag=AC56_4982
NZ_JJLS01000006.1	Protein Homology	CDS	566	1423	.	-	0	ID=cds-WP_000968125.1;Parent=gene-AC56_RS24175;Dbxref=GenBank:WP_000968125.1;Name=WP_000968125.1;gbkey=CDS;gene=sitD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707259.1;locus_tag=AC56_RS24175;product=iron/manganese ABC transporter permease subunit SitD;protein_id=WP_000968125.1;transl_table=11
NZ_JJLS01000006.1	RefSeq	gene	1420	2277	.	-	.	ID=gene-AC56_RS24170;Name=sitC;gbkey=Gene;gene=sitC;gene_biotype=protein_coding;locus_tag=AC56_RS24170;old_locus_tag=AC56_4983
NZ_JJLS01000006.1	Protein Homology	CDS	1420	2277	.	-	0	ID=cds-WP_001101728.1;Parent=gene-AC56_RS24170;Dbxref=GenBank:WP_001101728.1;Name=WP_001101728.1;gbkey=CDS;gene=sitC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707260.1;locus_tag=AC56_RS24170;product=iron/manganese ABC transporter permease subunit SitC;protein_id=WP_001101728.1;transl_table=11
NZ_JJLS01000006.1	RefSeq	gene	2274	3101	.	-	.	ID=gene-AC56_RS24165;Name=sitB;gbkey=Gene;gene=sitB;gene_biotype=protein_coding;locus_tag=AC56_RS24165;old_locus_tag=AC56_4984
NZ_JJLS01000006.1	Protein Homology	CDS	2274	3101	.	-	0	ID=cds-WP_000983718.1;Parent=gene-AC56_RS24165;Dbxref=GenBank:WP_000983718.1;Name=WP_000983718.1;gbkey=CDS;gene=sitB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707261.1;locus_tag=AC56_RS24165;product=iron/manganese ABC transporter ATP-binding protein SitB;protein_id=WP_000983718.1;transl_table=11
NZ_JJLS01000006.1	RefSeq	gene	3101	4015	.	-	.	ID=gene-AC56_RS24160;Name=sitA;gbkey=Gene;gene=sitA;gene_biotype=protein_coding;locus_tag=AC56_RS24160;old_locus_tag=AC56_4985
NZ_JJLS01000006.1	Protein Homology	CDS	3101	4015	.	-	0	ID=cds-WP_000286865.1;Parent=gene-AC56_RS24160;Dbxref=GenBank:WP_000286865.1;Name=WP_000286865.1;gbkey=CDS;gene=sitA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000949004.1;locus_tag=AC56_RS24160;product=iron/manganese ABC transporter substrate-binding protein SitA;protein_id=WP_000286865.1;transl_table=11
NZ_JJLS01000006.1	RefSeq	gene	4221	4346	.	+	.	ID=gene-AC56_RS33490;Name=AC56_RS33490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33490;old_locus_tag=AC56_4986
NZ_JJLS01000006.1	GeneMarkS-2+	CDS	4221	4346	.	+	0	ID=cds-WP_001614539.1;Parent=gene-AC56_RS33490;Dbxref=GenBank:WP_001614539.1;Name=WP_001614539.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS33490;product=hypothetical protein;protein_id=WP_001614539.1;transl_table=11
NZ_JJLS01000006.1	RefSeq	gene	4612	5046	.	-	.	ID=gene-AC56_RS24155;Name=uspF;gbkey=Gene;gene=uspF;gene_biotype=protein_coding;locus_tag=AC56_RS24155;old_locus_tag=AC56_4987
NZ_JJLS01000006.1	Protein Homology	CDS	4612	5046	.	-	0	ID=cds-WP_001300461.1;Parent=gene-AC56_RS24155;Dbxref=GenBank:WP_001300461.1;Name=WP_001300461.1;gbkey=CDS;gene=uspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415894.4;locus_tag=AC56_RS24155;product=universal stress protein UspF;protein_id=WP_001300461.1;transl_table=11
NZ_JJLS01000006.1	RefSeq	gene	5187	6146	.	-	.	ID=gene-AC56_RS24150;Name=ompN;end_range=6146,.;gbkey=Gene;gene=ompN;gene_biotype=protein_coding;locus_tag=AC56_RS24150;old_locus_tag=AC56_4988;partial=true
NZ_JJLS01000006.1	Protein Homology	CDS	5187	6146	.	-	0	ID=cds-WP_032282443.1;Parent=gene-AC56_RS24150;Dbxref=GenBank:WP_032282443.1;Name=WP_032282443.1;end_range=6146,.;gbkey=CDS;gene=ompN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415895.1;locus_tag=AC56_RS24150;partial=true;product=porin OmpN;protein_id=WP_032282443.1;transl_table=11
##sequence-region NZ_JJLS01000007.1 1 10248
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000007.1	RefSeq	region	1	10248	.	+	.	ID=NZ_JJLS01000007.1:1..10248;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000007.1	RefSeq	pseudogene	1	241	.	-	.	ID=gene-AC56_RS32885;Name=AC56_RS32885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS32885;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000007.1	Protein Homology	CDS	1	241	.	-	0	ID=cds-AC56_RS32885;Parent=gene-AC56_RS32885;Note=frameshifted%3B internal stop%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AC56_RS32885;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000007.1	RefSeq	pseudogene	279	350	.	+	.	ID=gene-AC56_RS31730;Name=AC56_RS31730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS31730;partial=true;pseudo=true;start_range=.,279
NZ_JJLS01000007.1	Protein Homology	CDS	279	350	.	+	0	ID=cds-AC56_RS31730;Parent=gene-AC56_RS31730;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013446.6;locus_tag=AC56_RS31730;partial=true;product=hypothetical protein;pseudo=true;start_range=.,279;transl_table=11
NZ_JJLS01000007.1	RefSeq	pseudogene	361	1058	.	-	.	ID=gene-AC56_RS30755;Name=AC56_RS30755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS30755;pseudo=true
NZ_JJLS01000007.1	Protein Homology	CDS	361	1058	.	-	0	ID=cds-AC56_RS30755;Parent=gene-AC56_RS30755;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558153.1;locus_tag=AC56_RS30755;product=IS1-like element IS1F family transposase;pseudo=true;transl_table=11
NZ_JJLS01000007.1	RefSeq	gene	1201	2700	.	-	.	ID=gene-AC56_RS24135;Name=AC56_RS24135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS24135;old_locus_tag=AC56_4992
NZ_JJLS01000007.1	Protein Homology	CDS	1201	2700	.	-	0	ID=cds-WP_001598616.1;Parent=gene-AC56_RS24135;Dbxref=GenBank:WP_001598616.1;Name=WP_001598616.1;Ontology_term=GO:0006865,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245085.1;locus_tag=AC56_RS24135;product=basic amino acid/polyamine antiporter;protein_id=WP_001598616.1;transl_table=11
NZ_JJLS01000007.1	RefSeq	gene	2775	5144	.	-	.	ID=gene-AC56_RS24130;Name=AC56_RS24130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS24130;old_locus_tag=AC56_4993
NZ_JJLS01000007.1	Protein Homology	CDS	2775	5144	.	-	0	ID=cds-WP_001598617.1;Parent=gene-AC56_RS24130;Dbxref=GenBank:WP_001598617.1;Name=WP_001598617.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000671167.1;locus_tag=AC56_RS24130;product=Orn/Lys/Arg decarboxylase N-terminal domain-containing protein;protein_id=WP_001598617.1;transl_table=11
NZ_JJLS01000007.1	RefSeq	gene	5249	6718	.	-	.	ID=gene-AC56_RS24125;Name=AC56_RS24125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS24125;old_locus_tag=AC56_4994
NZ_JJLS01000007.1	Protein Homology	CDS	5249	6718	.	-	0	ID=cds-WP_001329893.1;Parent=gene-AC56_RS24125;Dbxref=GenBank:WP_001329893.1;Name=WP_001329893.1;Ontology_term=GO:0006865,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001616049.1;locus_tag=AC56_RS24125;product=basic amino acid/polyamine antiporter;protein_id=WP_001329893.1;transl_table=11
NZ_JJLS01000007.1	RefSeq	gene	6971	7665	.	+	.	ID=gene-AC56_RS30760;Name=AC56_RS30760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS30760
NZ_JJLS01000007.1	Protein Homology	CDS	6971	7217	.	+	0	ID=cds-WP_096989293.1;Parent=gene-AC56_RS30760;Dbxref=GenBank:WP_096989293.1;Name=WP_096989293.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477181.1;locus_tag=AC56_RS30760;product=IS1 family transposase;protein_id=WP_096989293.1;transl_table=11
NZ_JJLS01000007.1	Protein Homology	CDS	7217	7665	.	+	2	ID=cds-WP_096989293.1;Parent=gene-AC56_RS30760;Dbxref=GenBank:WP_096989293.1;Name=WP_096989293.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477181.1;locus_tag=AC56_RS30760;product=IS1 family transposase;protein_id=WP_096989293.1;transl_table=11
NZ_JJLS01000007.1	RefSeq	pseudogene	8298	8687	.	+	.	ID=gene-AC56_RS24120;Name=AC56_RS24120;end_range=8687,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS24120;old_locus_tag=AC56_4997;partial=true;pseudo=true
NZ_JJLS01000007.1	Protein Homology	CDS	8298	8687	.	+	0	ID=cds-AC56_RS24120;Parent=gene-AC56_RS24120;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=8687,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312152.1;locus_tag=AC56_RS24120;partial=true;product=alcohol dehydrogenase catalytic domain-containing protein;pseudo=true;transl_table=11
NZ_JJLS01000007.1	RefSeq	pseudogene	8760	9113	.	-	.	ID=gene-AC56_RS28030;Name=istB;end_range=9113,.;gbkey=Gene;gene=istB;gene_biotype=pseudogene;locus_tag=AC56_RS28030;old_locus_tag=AC56_4998;partial=true;pseudo=true
NZ_JJLS01000007.1	Protein Homology	CDS	8760	9113	.	-	0	ID=cds-AC56_RS28030;Parent=gene-AC56_RS28030;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=9113,.;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=AC56_RS28030;partial=true;product=IS21-like element IS100kyp family helper ATPase IstB;pseudo=true;transl_table=11
NZ_JJLS01000007.1	RefSeq	pseudogene	9167	10248	.	+	.	ID=gene-AC56_RS24105;Name=AC56_RS24105;end_range=10248,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS24105;old_locus_tag=AC56_5000;partial=true;pseudo=true
NZ_JJLS01000007.1	Protein Homology	CDS	9167	10248	.	+	0	ID=cds-AC56_RS24105;Parent=gene-AC56_RS24105;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;end_range=10248,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611465.1;locus_tag=AC56_RS24105;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11
NZ_JJLS01000007.1	cmsearch	sequence_feature	9448	9564	.	+	.	ID=id-AC56_RS24105;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS24105;pseudo=true
##sequence-region NZ_JJLS01000008.1 1 1916
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000008.1	RefSeq	region	1	1916	.	+	.	ID=NZ_JJLS01000008.1:1..1916;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000008.1	RefSeq	gene	1	374	.	-	.	ID=gene-AC56_RS24100;Name=AC56_RS24100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS24100;old_locus_tag=AC56_5001;partial=true;start_range=.,1
NZ_JJLS01000008.1	Protein Homology	CDS	1	374	.	-	0	ID=cds-WP_032277913.1;Parent=gene-AC56_RS24100;Dbxref=GenBank:WP_032277913.1;Name=WP_032277913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS24100;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032277913.1;start_range=.,1;transl_table=11
NZ_JJLS01000008.1	RefSeq	pseudogene	445	1449	.	+	.	ID=gene-AC56_RS24095;Name=AC56_RS24095;end_range=1449,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS24095;old_locus_tag=AC56_5002;partial=true;pseudo=true;start_range=.,445
NZ_JJLS01000008.1	Protein Homology	CDS	445	1449	.	+	0	ID=cds-AC56_RS24095;Parent=gene-AC56_RS24095;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1449,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706315.1;locus_tag=AC56_RS24095;partial=true;product=tetratricopeptide repeat protein;pseudo=true;start_range=.,445;transl_table=11
NZ_JJLS01000008.1	RefSeq	pseudogene	1506	1916	.	-	.	ID=gene-AC56_RS0124375;Name=AC56_RS0124375;end_range=1916,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0124375;old_locus_tag=AC56_5003;partial=true;pseudo=true
NZ_JJLS01000008.1	Protein Homology	CDS	1506	1916	.	-	0	ID=cds-AC56_RS0124375;Parent=gene-AC56_RS0124375;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=1916,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS0124375;partial=true;product=IS5-like element IS903B family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000009.1 1 8496
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000009.1	RefSeq	region	1	8496	.	+	.	ID=NZ_JJLS01000009.1:1..8496;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000009.1	RefSeq	pseudogene	1	412	.	+	.	ID=gene-AC56_RS0124380;Name=AC56_RS0124380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0124380;old_locus_tag=AC56_5004;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000009.1	Protein Homology	CDS	1	412	.	+	1	ID=cds-AC56_RS0124380;Parent=gene-AC56_RS0124380;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS0124380;partial=true;product=IS5-like element ISKpn26 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000009.1	RefSeq	gene	394	591	.	+	.	ID=gene-AC56_RS33635;Name=AC56_RS33635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33635
NZ_JJLS01000009.1	Protein Homology	CDS	394	591	.	+	0	ID=cds-WP_148724947.1;Parent=gene-AC56_RS33635;Dbxref=GenBank:WP_148724947.1;Name=WP_148724947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001340350.1;locus_tag=AC56_RS33635;product=hypothetical protein;protein_id=WP_148724947.1;transl_table=11
NZ_JJLS01000009.1	RefSeq	pseudogene	552	1037	.	-	.	ID=gene-AC56_RS24090;Name=AC56_RS24090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS24090;old_locus_tag=AC56_5005;partial=true;pseudo=true;start_range=.,552
NZ_JJLS01000009.1	Protein Homology	CDS	552	1037	.	-	0	ID=cds-AC56_RS24090;Parent=gene-AC56_RS24090;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310402.1;locus_tag=AC56_RS24090;partial=true;product=FAD/NAD(P)-binding protein;pseudo=true;start_range=.,552;transl_table=11
NZ_JJLS01000009.1	RefSeq	gene	1163	1468	.	-	.	ID=gene-AC56_RS24085;Name=ydhR;gbkey=Gene;gene=ydhR;gene_biotype=protein_coding;locus_tag=AC56_RS24085;old_locus_tag=AC56_5006
NZ_JJLS01000009.1	Protein Homology	CDS	1163	1468	.	-	0	ID=cds-WP_000212680.1;Parent=gene-AC56_RS24085;Dbxref=GenBank:WP_000212680.1;Name=WP_000212680.1;gbkey=CDS;gene=ydhR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416182.1;locus_tag=AC56_RS24085;product=monooxygenase;protein_id=WP_000212680.1;transl_table=11
NZ_JJLS01000009.1	RefSeq	gene	1576	1652	.	-	.	ID=gene-AC56_RS24080;Name=AC56_RS24080;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS24080;old_locus_tag=AC56_5007
NZ_JJLS01000009.1	tRNAscan-SE	tRNA	1576	1652	.	-	.	ID=rna-AC56_RS24080;Parent=gene-AC56_RS24080;anticodon=(pos:complement(1616..1618));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS24080;product=tRNA-Val
NZ_JJLS01000009.1	tRNAscan-SE	exon	1576	1652	.	-	.	ID=exon-AC56_RS24080-1;Parent=rna-AC56_RS24080;anticodon=(pos:complement(1616..1618));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS24080;product=tRNA-Val
NZ_JJLS01000009.1	RefSeq	gene	1657	1733	.	-	.	ID=gene-AC56_RS24075;Name=AC56_RS24075;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS24075;old_locus_tag=AC56_5008
NZ_JJLS01000009.1	tRNAscan-SE	tRNA	1657	1733	.	-	.	ID=rna-AC56_RS24075;Parent=gene-AC56_RS24075;anticodon=(pos:complement(1697..1699));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS24075;product=tRNA-Val
NZ_JJLS01000009.1	tRNAscan-SE	exon	1657	1733	.	-	.	ID=exon-AC56_RS24075-1;Parent=rna-AC56_RS24075;anticodon=(pos:complement(1697..1699));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS24075;product=tRNA-Val
NZ_JJLS01000009.1	RefSeq	gene	2041	3297	.	+	.	ID=gene-AC56_RS24070;Name=ydhQ;gbkey=Gene;gene=ydhQ;gene_biotype=protein_coding;locus_tag=AC56_RS24070;old_locus_tag=AC56_5009
NZ_JJLS01000009.1	Protein Homology	CDS	2041	3297	.	+	0	ID=cds-WP_000534307.1;Parent=gene-AC56_RS24070;Dbxref=GenBank:WP_000534307.1;Name=WP_000534307.1;gbkey=CDS;gene=ydhQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416181.1;locus_tag=AC56_RS24070;product=AIDA repeat-containing protein;protein_id=WP_000534307.1;transl_table=11
NZ_JJLS01000009.1	RefSeq	gene	3338	4711	.	-	.	ID=gene-AC56_RS24065;Name=mdtK;gbkey=Gene;gene=mdtK;gene_biotype=protein_coding;locus_tag=AC56_RS24065;old_locus_tag=AC56_5010
NZ_JJLS01000009.1	Protein Homology	CDS	3338	4711	.	-	0	ID=cds-WP_001174961.1;Parent=gene-AC56_RS24065;Dbxref=GenBank:WP_001174961.1;Name=WP_001174961.1;gbkey=CDS;gene=mdtK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025307.1;locus_tag=AC56_RS24065;product=multidrug efflux MATE transporter MdtK;protein_id=WP_001174961.1;transl_table=11
NZ_JJLS01000009.1	RefSeq	gene	4926	5567	.	+	.	ID=gene-AC56_RS24060;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=AC56_RS24060;old_locus_tag=AC56_5011
NZ_JJLS01000009.1	Protein Homology	CDS	4926	5567	.	+	0	ID=cds-WP_000493947.1;Parent=gene-AC56_RS24060;Dbxref=GenBank:WP_000493947.1;Name=WP_000493947.1;Ontology_term=GO:0004746;gbkey=CDS;gene=ribE;go_function=riboflavin synthase activity|0004746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416179.1;locus_tag=AC56_RS24060;product=riboflavin synthase;protein_id=WP_000493947.1;transl_table=11
NZ_JJLS01000009.1	RefSeq	gene	5607	6755	.	-	.	ID=gene-AC56_RS24055;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=AC56_RS24055;old_locus_tag=AC56_5012
NZ_JJLS01000009.1	Protein Homology	CDS	5607	6755	.	-	0	ID=cds-WP_000098896.1;Parent=gene-AC56_RS24055;Dbxref=GenBank:WP_000098896.1;Name=WP_000098896.1;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416178.1;locus_tag=AC56_RS24055;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WP_000098896.1;transl_table=11
NZ_JJLS01000009.1	RefSeq	gene	7040	8251	.	-	.	ID=gene-AC56_RS24050;Name=punC;gbkey=Gene;gene=punC;gene_biotype=protein_coding;gene_synonym=ydhC;locus_tag=AC56_RS24050;old_locus_tag=AC56_5013
NZ_JJLS01000009.1	Protein Homology	CDS	7040	8251	.	-	0	ID=cds-WP_001182363.1;Parent=gene-AC56_RS24050;Dbxref=GenBank:WP_001182363.1;Name=WP_001182363.1;Ontology_term=GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310396.1;locus_tag=AC56_RS24050;product=purine nucleoside transporter PunC;protein_id=WP_001182363.1;transl_table=11
NZ_JJLS01000009.1	RefSeq	gene	8364	8496	.	+	.	ID=gene-AC56_RS24045;Name=AC56_RS24045;end_range=8496,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS24045;old_locus_tag=AC56_5014;partial=true
NZ_JJLS01000009.1	Protein Homology	CDS	8364	8496	.	+	0	ID=cds-WP_001322164.1;Parent=gene-AC56_RS24045;Dbxref=GenBank:WP_001322164.1;Name=WP_001322164.1;Ontology_term=GO:0006355,GO:0003700;end_range=8496,.;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310395.1;locus_tag=AC56_RS24045;partial=true;product=LysR family transcriptional regulator;protein_id=WP_001322164.1;transl_table=11
##sequence-region NZ_JJLS01000010.1 1 5277
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000010.1	RefSeq	region	1	5277	.	+	.	ID=NZ_JJLS01000010.1:1..5277;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000010.1	RefSeq	pseudogene	1	274	.	-	.	ID=gene-AC56_RS24040;Name=AC56_RS24040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS24040;old_locus_tag=AC56_5015;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000010.1	Protein Homology	CDS	1	274	.	-	0	ID=cds-AC56_RS24040;Parent=gene-AC56_RS24040;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS24040;partial=true;product=IS4 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000010.1	RefSeq	pseudogene	420	2087	.	+	.	ID=gene-AC56_RS33065;Name=ltrA;gbkey=Gene;gene=ltrA;gene_biotype=pseudogene;locus_tag=AC56_RS33065;pseudo=true
NZ_JJLS01000010.1	Protein Homology	CDS	420	2087	.	+	0	ID=cds-AC56_RS33065;Parent=gene-AC56_RS33065;Note=internal stop;Ontology_term=GO:0000373,GO:0003964;gbkey=CDS;gene=ltrA;go_function=RNA-directed DNA polymerase activity|0003964||IEA;go_process=Group II intron splicing|0000373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748652.1;locus_tag=AC56_RS33065;product=group II intron reverse transcriptase/maturase;pseudo=true;transl_table=11
NZ_JJLS01000010.1	RefSeq	gene	2246	2869	.	-	.	ID=gene-AC56_RS0124390;Name=tetR(B);gbkey=Gene;gene=tetR(B);gene_biotype=protein_coding;locus_tag=AC56_RS0124390
NZ_JJLS01000010.1	Protein Homology	CDS	2246	2869	.	-	0	ID=cds-WP_000088605.1;Parent=gene-AC56_RS0124390;Dbxref=GenBank:WP_000088605.1;Name=WP_000088605.1;gbkey=CDS;gene=tetR(B);inference=COORDINATES: similar to AA sequence:RefSeq:WP_000088605.1;locus_tag=AC56_RS0124390;product=tetracycline resistance transcriptional repressor TetR(B);protein_id=WP_000088605.1;transl_table=11
NZ_JJLS01000010.1	RefSeq	gene	2951	4156	.	+	.	ID=gene-AC56_RS24035;Name=tet(B);gbkey=Gene;gene=tet(B);gene_biotype=protein_coding;locus_tag=AC56_RS24035;old_locus_tag=AC56_5019
NZ_JJLS01000010.1	Protein Homology	CDS	2951	4156	.	+	0	ID=cds-WP_001089068.1;Parent=gene-AC56_RS24035;Dbxref=GenBank:WP_001089068.1;Name=WP_001089068.1;Ontology_term=GO:0015904,GO:0055085,GO:0008493,GO:0022857,GO:0016020;gbkey=CDS;gene=tet(B);go_component=membrane|0016020||IEA;go_function=tetracycline transmembrane transporter activity|0008493||IEA,transmembrane transporter activity|0022857||IEA;go_process=tetracycline transmembrane transport|0015904||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001089064.1;locus_tag=AC56_RS24035;product=tetracycline efflux MFS transporter Tet(B);protein_id=WP_001089068.1;transl_table=11
NZ_JJLS01000010.1	RefSeq	gene	4269	4862	.	-	.	ID=gene-AC56_RS24030;Name=tetC;gbkey=Gene;gene=tetC;gene_biotype=protein_coding;locus_tag=AC56_RS24030;old_locus_tag=AC56_5020
NZ_JJLS01000010.1	Protein Homology	CDS	4269	4862	.	-	0	ID=cds-WP_000428546.1;Parent=gene-AC56_RS24030;Dbxref=GenBank:WP_000428546.1;Name=WP_000428546.1;Ontology_term=GO:0003677;gbkey=CDS;gene=tetC;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001517796.1;locus_tag=AC56_RS24030;product=tetracyline resistance-associated transcriptional repressor TetC;protein_id=WP_000428546.1;transl_table=11
##sequence-region NZ_JJLS01000011.1 1 5731
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000011.1	RefSeq	region	1	5731	.	+	.	ID=NZ_JJLS01000011.1:1..5731;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000011.1	RefSeq	gene	1	655	.	+	.	ID=gene-AC56_RS24025;Name=AC56_RS24025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS24025;old_locus_tag=AC56_5022;partial=true;start_range=.,1
NZ_JJLS01000011.1	Protein Homology	CDS	1	655	.	+	1	ID=cds-WP_032277616.1;Parent=gene-AC56_RS24025;Dbxref=GenBank:WP_032277616.1;Name=WP_032277616.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AC56_RS24025;partial=true;product=IS3 family transposase;protein_id=WP_032277616.1;start_range=.,1;transl_table=11
NZ_JJLS01000011.1	RefSeq	gene	777	1478	.	-	.	ID=gene-AC56_RS24020;Name=AC56_RS24020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS24020;old_locus_tag=AC56_5023
NZ_JJLS01000011.1	Protein Homology	CDS	777	1478	.	-	0	ID=cds-WP_001575713.1;Parent=gene-AC56_RS24020;Dbxref=GenBank:WP_001575713.1;Name=WP_001575713.1;Ontology_term=GO:0006270,GO:0003677,GO:0003887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724992.1;locus_tag=AC56_RS24020;product=replication initiation protein;protein_id=WP_001575713.1;transl_table=11
NZ_JJLS01000011.1	RefSeq	pseudogene	2256	2405	.	+	.	ID=gene-AC56_RS31740;Name=AC56_RS31740;end_range=2405,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS31740;old_locus_tag=AC56_5024;partial=true;pseudo=true;start_range=.,2256
NZ_JJLS01000011.1	Protein Homology	CDS	2256	2405	.	+	0	ID=cds-AC56_RS31740;Parent=gene-AC56_RS31740;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2405,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343760.1;locus_tag=AC56_RS31740;partial=true;product=ISL3 family transposase;pseudo=true;start_range=.,2256;transl_table=11
NZ_JJLS01000011.1	RefSeq	pseudogene	2511	3070	.	+	.	ID=gene-AC56_RS0124400;Name=istB;gbkey=Gene;gene=istB;gene_biotype=pseudogene;locus_tag=AC56_RS0124400;old_locus_tag=AC56_5025;partial=true;pseudo=true;start_range=.,2511
NZ_JJLS01000011.1	Protein Homology	CDS	2511	3070	.	+	0	ID=cds-AC56_RS0124400;Parent=gene-AC56_RS0124400;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000544830.1;locus_tag=AC56_RS0124400;partial=true;product=IS21-like element IS21 family helper ATPase IstB;pseudo=true;start_range=.,2511;transl_table=11
NZ_JJLS01000011.1	RefSeq	pseudogene	3143	3369	.	+	.	ID=gene-AC56_RS28065;Name=AC56_RS28065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS28065;partial=true;pseudo=true;start_range=.,3143
NZ_JJLS01000011.1	Protein Homology	CDS	3143	3369	.	+	0	ID=cds-AC56_RS28065;Parent=gene-AC56_RS28065;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343760.1;locus_tag=AC56_RS28065;partial=true;product=transposase;pseudo=true;start_range=.,3143;transl_table=11
NZ_JJLS01000011.1	RefSeq	gene	4164	4598	.	+	.	ID=gene-AC56_RS24015;Name=psiB;gbkey=Gene;gene=psiB;gene_biotype=protein_coding;locus_tag=AC56_RS24015;old_locus_tag=AC56_5027
NZ_JJLS01000011.1	Protein Homology	CDS	4164	4598	.	+	0	ID=cds-WP_001575710.1;Parent=gene-AC56_RS24015;Dbxref=GenBank:WP_001575710.1;Name=WP_001575710.1;gbkey=CDS;gene=psiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000845953.1;locus_tag=AC56_RS24015;product=conjugation system SOS inhibitor PsiB;protein_id=WP_001575710.1;transl_table=11
NZ_JJLS01000011.1	RefSeq	pseudogene	4697	4871	.	-	.	ID=gene-AC56_RS28070;Name=AC56_RS28070;end_range=4871,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS28070;partial=true;pseudo=true
NZ_JJLS01000011.1	Protein Homology	CDS	4697	4871	.	-	0	ID=cds-AC56_RS28070;Parent=gene-AC56_RS28070;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4871,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904641.1;locus_tag=AC56_RS28070;partial=true;product=IS4 family transposase;pseudo=true;transl_table=11
NZ_JJLS01000011.1	RefSeq	pseudogene	4997	5101	.	-	.	ID=gene-AC56_RS33815;Name=AC56_RS33815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33815;partial=true;pseudo=true;start_range=.,4997
NZ_JJLS01000011.1	Protein Homology	CDS	4997	5101	.	-	0	ID=cds-AC56_RS33815;Parent=gene-AC56_RS33815;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460023.1;locus_tag=AC56_RS33815;partial=true;product=hypothetical protein;pseudo=true;start_range=.,4997;transl_table=11
NZ_JJLS01000011.1	RefSeq	pseudogene	5159	5731	.	+	.	ID=gene-AC56_RS31745;Name=AC56_RS31745;end_range=5731,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS31745;partial=true;pseudo=true
NZ_JJLS01000011.1	Protein Homology	CDS	5159	5731	.	+	0	ID=cds-AC56_RS31745;Parent=gene-AC56_RS31745;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=5731,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AC56_RS31745;partial=true;product=transposase;pseudo=true;transl_table=11
NZ_JJLS01000011.1	cmsearch	sequence_feature	5440	5556	.	+	.	ID=id-AC56_RS31745;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS31745;pseudo=true
##sequence-region NZ_JJLS01000012.1 1 2047
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000012.1	RefSeq	region	1	2047	.	+	.	ID=NZ_JJLS01000012.1:1..2047;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000012.1	RefSeq	gene	1	578	.	+	.	ID=gene-AC56_RS24000;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=AC56_RS24000;old_locus_tag=AC56_5030;partial=true;start_range=.,1
NZ_JJLS01000012.1	Protein Homology	CDS	1	578	.	+	2	ID=cds-WP_032202138.1;Parent=gene-AC56_RS24000;Dbxref=GenBank:WP_032202138.1;Name=WP_032202138.1;Ontology_term=GO:0019629,GO:0046421;gbkey=CDS;gene=prpB;go_function=methylisocitrate lyase activity|0046421||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414865.1;locus_tag=AC56_RS24000;partial=true;product=methylisocitrate lyase;protein_id=WP_032202138.1;start_range=.,1;transl_table=11
NZ_JJLS01000012.1	RefSeq	gene	925	2047	.	+	.	ID=gene-AC56_RS23995;Name=prpC;end_range=2047,.;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=AC56_RS23995;old_locus_tag=AC56_5031;partial=true
NZ_JJLS01000012.1	Protein Homology	CDS	925	2047	.	+	0	ID=cds-WP_032282448.1;Parent=gene-AC56_RS23995;Dbxref=GenBank:WP_032282448.1;Name=WP_032282448.1;Ontology_term=GO:0019679,GO:0004108,GO:0050440;end_range=2047,.;gbkey=CDS;gene=prpC;go_function=citrate (Si)-synthase activity|0004108||IEA,2-methylcitrate synthase activity|0050440||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414867.1;locus_tag=AC56_RS23995;partial=true;product=bifunctional 2-methylcitrate synthase/citrate synthase;protein_id=WP_032282448.1;transl_table=11
##sequence-region NZ_JJLS01000013.1 1 2030
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000013.1	RefSeq	region	1	2030	.	+	.	ID=NZ_JJLS01000013.1:1..2030;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000013.1	RefSeq	gene	64	822	.	-	.	ID=gene-AC56_RS23990;Name=phnP;gbkey=Gene;gene=phnP;gene_biotype=protein_coding;locus_tag=AC56_RS23990;old_locus_tag=AC56_5032
NZ_JJLS01000013.1	Protein Homology	CDS	64	822	.	-	0	ID=cds-WP_000059908.1;Parent=gene-AC56_RS23990;Dbxref=GenBank:WP_000059908.1;Name=WP_000059908.1;Ontology_term=GO:0019700,GO:0008081;gbkey=CDS;gene=phnP;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418516.1;locus_tag=AC56_RS23990;product=phosphonate metabolism protein PhnP;protein_id=WP_000059908.1;transl_table=11
NZ_JJLS01000013.1	RefSeq	gene	824	1258	.	-	.	ID=gene-AC56_RS23985;Name=phnO;gbkey=Gene;gene=phnO;gene_biotype=protein_coding;locus_tag=AC56_RS23985;old_locus_tag=AC56_5033
NZ_JJLS01000013.1	Protein Homology	CDS	824	1258	.	-	0	ID=cds-WP_001110490.1;Parent=gene-AC56_RS23985;Dbxref=GenBank:WP_001110490.1;Name=WP_001110490.1;gbkey=CDS;gene=phnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418517.1;locus_tag=AC56_RS23985;product=aminoalkylphosphonate N-acetyltransferase;protein_id=WP_001110490.1;transl_table=11
NZ_JJLS01000013.1	RefSeq	gene	1245	1802	.	-	.	ID=gene-AC56_RS23980;Name=phnN;gbkey=Gene;gene=phnN;gene_biotype=protein_coding;locus_tag=AC56_RS23980;old_locus_tag=AC56_5034
NZ_JJLS01000013.1	Protein Homology	CDS	1245	1802	.	-	0	ID=cds-WP_000971883.1;Parent=gene-AC56_RS23980;Dbxref=GenBank:WP_000971883.1;Name=WP_000971883.1;Ontology_term=GO:0006015,GO:0033863;gbkey=CDS;gene=phnN;go_function=ribose 1%2C5-bisphosphate phosphokinase activity|0033863||IEA;go_process=5-phosphoribose 1-diphosphate biosynthetic process|0006015||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313104.1;locus_tag=AC56_RS23980;product=ribose 1%2C5-bisphosphokinase;protein_id=WP_000971883.1;transl_table=11
NZ_JJLS01000013.1	RefSeq	gene	1802	2030	.	-	.	ID=gene-AC56_RS23975;Name=AC56_RS23975;end_range=2030,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23975;old_locus_tag=AC56_5035;partial=true
NZ_JJLS01000013.1	Protein Homology	CDS	1802	2030	.	-	1	ID=cds-WP_032258750.1;Parent=gene-AC56_RS23975;Dbxref=GenBank:WP_032258750.1;Name=WP_032258750.1;end_range=2030,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313105.1;locus_tag=AC56_RS23975;partial=true;product=amidohydrolase family protein;protein_id=WP_032258750.1;transl_table=11
##sequence-region NZ_JJLS01000014.1 1 12702
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000014.1	RefSeq	region	1	12702	.	+	.	ID=NZ_JJLS01000014.1:1..12702;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000014.1	RefSeq	gene	1	985	.	+	.	ID=gene-AC56_RS23970;Name=AC56_RS23970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23970;old_locus_tag=AC56_5036;partial=true;start_range=.,1
NZ_JJLS01000014.1	Protein Homology	CDS	1	985	.	+	1	ID=cds-WP_032282439.1-2;Parent=gene-AC56_RS23970;Dbxref=GenBank:WP_032282439.1;Name=WP_032282439.1;Ontology_term=GO:0006540,GO:0004351,GO:0030170;gbkey=CDS;go_function=glutamate decarboxylase activity|0004351||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyrate shunt|0006540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310125.1;locus_tag=AC56_RS23970;partial=true;product=glutamate decarboxylase;protein_id=WP_032282439.1;start_range=.,1;transl_table=11
NZ_JJLS01000014.1	RefSeq	gene	1355	2179	.	+	.	ID=gene-AC56_RS23965;Name=gadX;gbkey=Gene;gene=gadX;gene_biotype=protein_coding;locus_tag=AC56_RS23965;old_locus_tag=AC56_5037
NZ_JJLS01000014.1	Protein Homology	CDS	1355	2179	.	+	0	ID=cds-WP_001191059.1-2;Parent=gene-AC56_RS23965;Dbxref=GenBank:WP_001191059.1;Name=WP_001191059.1;gbkey=CDS;gene=gadX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417973.1;locus_tag=AC56_RS23965;product=acid resistance transcriptional activator GadX;protein_id=WP_001191059.1;transl_table=11
NZ_JJLS01000014.1	RefSeq	gene	2547	3275	.	+	.	ID=gene-AC56_RS23960;Name=gadW;gbkey=Gene;gene=gadW;gene_biotype=protein_coding;locus_tag=AC56_RS23960;old_locus_tag=AC56_5038
NZ_JJLS01000014.1	Protein Homology	CDS	2547	3275	.	+	0	ID=cds-WP_000149999.1-2;Parent=gene-AC56_RS23960;Dbxref=GenBank:WP_000149999.1;Name=WP_000149999.1;gbkey=CDS;gene=gadW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312422.1;locus_tag=AC56_RS23960;product=acid resistance transcriptional activator GadW;protein_id=WP_000149999.1;transl_table=11
NZ_JJLS01000014.1	RefSeq	gene	3638	6751	.	-	.	ID=gene-AC56_RS23955;Name=mdtF;gbkey=Gene;gene=mdtF;gene_biotype=protein_coding;locus_tag=AC56_RS23955;old_locus_tag=AC56_5039
NZ_JJLS01000014.1	Protein Homology	CDS	3638	6751	.	-	0	ID=cds-WP_001506351.1-2;Parent=gene-AC56_RS23955;Dbxref=GenBank:WP_001506351.1;Name=WP_001506351.1;gbkey=CDS;gene=mdtF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417971.1;locus_tag=AC56_RS23955;product=multidrug efflux pump RND permease MdtF;protein_id=WP_001506351.1;transl_table=11
NZ_JJLS01000014.1	RefSeq	gene	6776	7885	.	-	.	ID=gene-AC56_RS23950;Name=mdtE;gbkey=Gene;gene=mdtE;gene_biotype=protein_coding;locus_tag=AC56_RS23950;old_locus_tag=AC56_5040
NZ_JJLS01000014.1	Protein Homology	CDS	6776	7885	.	-	0	ID=cds-WP_001340474.1-2;Parent=gene-AC56_RS23950;Dbxref=GenBank:WP_001340474.1;Name=WP_001340474.1;gbkey=CDS;gene=mdtE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001081792.1;locus_tag=AC56_RS23950;product=multidrug transporter subunit MdtE;protein_id=WP_001340474.1;transl_table=11
NZ_JJLS01000014.1	RefSeq	gene	7993	8271	.	+	.	ID=gene-AC56_RS0124405;Name=AC56_RS0124405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0124405
NZ_JJLS01000014.1	Protein Homology	CDS	7993	8271	.	+	0	ID=cds-WP_001205329.1-2;Parent=gene-AC56_RS0124405;Dbxref=GenBank:WP_001205329.1;Name=WP_001205329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439288.1;locus_tag=AC56_RS0124405;product=hypothetical protein;protein_id=WP_001205329.1;transl_table=11
NZ_JJLS01000014.1	RefSeq	gene	8272	8799	.	-	.	ID=gene-AC56_RS23945;Name=gadE;gbkey=Gene;gene=gadE;gene_biotype=protein_coding;locus_tag=AC56_RS23945;old_locus_tag=AC56_5041
NZ_JJLS01000014.1	Protein Homology	CDS	8272	8799	.	-	0	ID=cds-WP_000576690.1-2;Parent=gene-AC56_RS23945;Dbxref=GenBank:WP_000576690.1;Name=WP_000576690.1;gbkey=CDS;gene=gadE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312419.1;locus_tag=AC56_RS23945;product=acid resistance transcriptional activator GadE;protein_id=WP_000576690.1;transl_table=11
NZ_JJLS01000014.1	RefSeq	gene	9598	10170	.	-	.	ID=gene-AC56_RS23940;Name=hdeD;gbkey=Gene;gene=hdeD;gene_biotype=protein_coding;locus_tag=AC56_RS23940;old_locus_tag=AC56_5042
NZ_JJLS01000014.1	Protein Homology	CDS	9598	10170	.	-	0	ID=cds-WP_000965672.1-2;Parent=gene-AC56_RS23940;Dbxref=GenBank:WP_000965672.1;Name=WP_000965672.1;gbkey=CDS;gene=hdeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312418.1;locus_tag=AC56_RS23940;product=acid-resistance protein HdeD;protein_id=WP_000965672.1;transl_table=11
NZ_JJLS01000014.1	RefSeq	gene	10425	10757	.	+	.	ID=gene-AC56_RS23935;Name=hdeA;gbkey=Gene;gene=hdeA;gene_biotype=protein_coding;locus_tag=AC56_RS23935;old_locus_tag=AC56_5043
NZ_JJLS01000014.1	Protein Homology	CDS	10425	10757	.	+	0	ID=cds-WP_000756550.1-2;Parent=gene-AC56_RS23935;Dbxref=GenBank:WP_000756550.1;Name=WP_000756550.1;gbkey=CDS;gene=hdeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312417.1;locus_tag=AC56_RS23935;product=acid-activated periplasmic chaperone HdeA;protein_id=WP_000756550.1;transl_table=11
NZ_JJLS01000014.1	RefSeq	gene	10873	11199	.	+	.	ID=gene-AC56_RS23930;Name=hdeB;gbkey=Gene;gene=hdeB;gene_biotype=protein_coding;locus_tag=AC56_RS23930;old_locus_tag=AC56_5044
NZ_JJLS01000014.1	Protein Homology	CDS	10873	11199	.	+	0	ID=cds-WP_001298717.1-2;Parent=gene-AC56_RS23930;Dbxref=GenBank:WP_001298717.1;Name=WP_001298717.1;gbkey=CDS;gene=hdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417966.4;locus_tag=AC56_RS23930;product=acid-activated periplasmic chaperone HdeB;protein_id=WP_001298717.1;transl_table=11
NZ_JJLS01000014.1	RefSeq	gene	11263	11910	.	+	.	ID=gene-AC56_RS23925;Name=AC56_RS23925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23925;old_locus_tag=AC56_5045
NZ_JJLS01000014.1	Protein Homology	CDS	11263	11910	.	+	0	ID=cds-WP_001296814.1-2;Parent=gene-AC56_RS23925;Dbxref=GenBank:WP_001296814.1;Name=WP_001296814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417965.1;locus_tag=AC56_RS23925;product=MgtC/SapB family protein;protein_id=WP_001296814.1;transl_table=11
NZ_JJLS01000014.1	RefSeq	gene	11952	12482	.	-	.	ID=gene-AC56_RS23920;Name=AC56_RS23920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23920;old_locus_tag=AC56_5046
NZ_JJLS01000014.1	Protein Homology	CDS	11952	12482	.	-	0	ID=cds-WP_000478619.1;Parent=gene-AC56_RS23920;Dbxref=GenBank:WP_000478619.1;Name=WP_000478619.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417964.1;locus_tag=AC56_RS23920;product=helix-turn-helix transcriptional regulator;protein_id=WP_000478619.1;transl_table=11
NZ_JJLS01000014.1	RefSeq	pseudogene	12638	12702	.	-	.	ID=gene-AC56_RS33075;Name=AC56_RS33075;end_range=12702,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33075;partial=true;pseudo=true
NZ_JJLS01000014.1	Protein Homology	CDS	12638	12702	.	-	2	ID=cds-AC56_RS33075;Parent=gene-AC56_RS33075;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=12702,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312404.2;locus_tag=AC56_RS33075;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000015.1 1 454
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000015.1	RefSeq	region	1	454	.	+	.	ID=NZ_JJLS01000015.1:1..454;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000015.1	RefSeq	gene	124	239	.	-	.	ID=gene-AC56_RS23910;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AC56_RS23910;old_locus_tag=AC56_5048
NZ_JJLS01000015.1	cmsearch	rRNA	124	239	.	-	.	ID=rna-AC56_RS23910;Parent=gene-AC56_RS23910;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS23910;product=5S ribosomal RNA
NZ_JJLS01000015.1	cmsearch	exon	124	239	.	-	.	ID=exon-AC56_RS23910-1;Parent=rna-AC56_RS23910;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS23910;product=5S ribosomal RNA
NZ_JJLS01000015.1	RefSeq	gene	334	454	.	-	.	ID=gene-AC56_RS0124410;Name=AC56_RS0124410;end_range=454,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC56_RS0124410;partial=true
NZ_JJLS01000015.1	cmsearch	rRNA	334	454	.	-	.	ID=rna-AC56_RS0124410;Parent=gene-AC56_RS0124410;Dbxref=RFAM:RF02541;end_range=454,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS0124410;partial=true;product=23S ribosomal RNA
NZ_JJLS01000015.1	cmsearch	exon	334	454	.	-	.	ID=exon-AC56_RS0124410-1;Parent=rna-AC56_RS0124410;Dbxref=RFAM:RF02541;end_range=454,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS0124410;partial=true;product=23S ribosomal RNA
##sequence-region NZ_JJLS01000016.1 1 5639
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000016.1	RefSeq	region	1	5639	.	+	.	ID=NZ_JJLS01000016.1:1..5639;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000016.1	RefSeq	gene	1	214	.	+	.	ID=gene-AC56_RS23905;Name=AC56_RS23905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23905;old_locus_tag=AC56_5049;partial=true;start_range=.,1
NZ_JJLS01000016.1	Protein Homology	CDS	1	214	.	+	1	ID=cds-WP_024211097.1;Parent=gene-AC56_RS23905;Dbxref=GenBank:WP_024211097.1;Name=WP_024211097.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AC56_RS23905;partial=true;product=integrase core domain-containing protein;protein_id=WP_024211097.1;start_range=.,1;transl_table=11
NZ_JJLS01000016.1	RefSeq	gene	443	2638	.	-	.	ID=gene-AC56_RS23900;Name=iutA;gbkey=Gene;gene=iutA;gene_biotype=protein_coding;locus_tag=AC56_RS23900;old_locus_tag=AC56_5050
NZ_JJLS01000016.1	Protein Homology	CDS	443	2638	.	-	0	ID=cds-WP_001432292.1;Parent=gene-AC56_RS23900;Dbxref=GenBank:WP_001432292.1;Name=WP_001432292.1;gbkey=CDS;gene=iutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709458.2;locus_tag=AC56_RS23900;product=ferric aerobactin receptor IutA;protein_id=WP_001432292.1;transl_table=11
NZ_JJLS01000016.1	RefSeq	gene	2644	3981	.	-	.	ID=gene-AC56_RS23895;Name=iucD;gbkey=Gene;gene=iucD;gene_biotype=protein_coding;locus_tag=AC56_RS23895;old_locus_tag=AC56_5051
NZ_JJLS01000016.1	Protein Homology	CDS	2644	3981	.	-	0	ID=cds-WP_000750139.1;Parent=gene-AC56_RS23895;Dbxref=GenBank:WP_000750139.1;Name=WP_000750139.1;gbkey=CDS;gene=iucD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709457.1;locus_tag=AC56_RS23895;product=NADPH-dependent L-lysine N(6)-monooxygenase IucD;protein_id=WP_000750139.1;transl_table=11
NZ_JJLS01000016.1	RefSeq	gene	3978	5639	.	-	.	ID=gene-AC56_RS23890;Name=iucC;end_range=5639,.;gbkey=Gene;gene=iucC;gene_biotype=protein_coding;locus_tag=AC56_RS23890;old_locus_tag=AC56_5052;partial=true
NZ_JJLS01000016.1	Protein Homology	CDS	3978	5639	.	-	0	ID=cds-WP_032282450.1;Parent=gene-AC56_RS23890;Dbxref=GenBank:WP_032282450.1;Name=WP_032282450.1;end_range=5639,.;gbkey=CDS;gene=iucC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709456.1;locus_tag=AC56_RS23890;partial=true;product=NIS family aerobactin synthetase IucC;protein_id=WP_032282450.1;transl_table=11
##sequence-region NZ_JJLS01000017.1 1 5545
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000017.1	RefSeq	region	1	5545	.	+	.	ID=NZ_JJLS01000017.1:1..5545;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000017.1	RefSeq	pseudogene	1	546	.	+	.	ID=gene-AC56_RS23885;Name=AC56_RS23885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS23885;old_locus_tag=AC56_5053;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000017.1	Protein Homology	CDS	1	546	.	+	1	ID=cds-AC56_RS23885;Parent=gene-AC56_RS23885;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS23885;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000017.1	RefSeq	pseudogene	561	1874	.	+	.	ID=gene-AC56_RS23880;Name=AC56_RS23880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS23880;old_locus_tag=AC56_5054;partial=true;pseudo=true;start_range=.,561
NZ_JJLS01000017.1	Protein Homology	CDS	561	1874	.	+	0	ID=cds-AC56_RS23880;Parent=gene-AC56_RS23880;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313286.2;locus_tag=AC56_RS23880;partial=true;product=STY4851/ECs_5259 family protein;pseudo=true;start_range=.,561;transl_table=11
NZ_JJLS01000017.1	RefSeq	pseudogene	1874	5248	.	+	.	ID=gene-AC56_RS23875;Name=AC56_RS23875;end_range=5248,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS23875;old_locus_tag=AC56_5055;partial=true;pseudo=true
NZ_JJLS01000017.1	Protein Homology	CDS	1874	5248	.	+	0	ID=cds-AC56_RS23875;Parent=gene-AC56_RS23875;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003676,GO:0005524;end_range=5248,.;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313287.1;locus_tag=AC56_RS23875;partial=true;product=DEAD/DEAH box helicase;pseudo=true;transl_table=11
NZ_JJLS01000017.1	RefSeq	gene	5305	5545	.	+	.	ID=gene-AC56_RS0124420;Name=AC56_RS0124420;end_range=5545,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0124420;old_locus_tag=AC56_5056;partial=true
NZ_JJLS01000017.1	Protein Homology	CDS	5305	5545	.	+	0	ID=cds-WP_000179208.1;Parent=gene-AC56_RS0124420;Dbxref=GenBank:WP_000179208.1;Name=WP_000179208.1;end_range=5545,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS0124420;partial=true;product=IS1-like element transposase;protein_id=WP_000179208.1;transl_table=11
##sequence-region NZ_JJLS01000018.1 1 3564
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000018.1	RefSeq	region	1	3564	.	+	.	ID=NZ_JJLS01000018.1:1..3564;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000018.1	RefSeq	gene	1	788	.	+	.	ID=gene-AC56_RS23870;Name=AC56_RS23870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23870;old_locus_tag=AC56_5057;partial=true;start_range=.,1
NZ_JJLS01000018.1	Protein Homology	CDS	1	788	.	+	2	ID=cds-WP_032158608.1;Parent=gene-AC56_RS23870;Dbxref=GenBank:WP_032158608.1;Name=WP_032158608.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611553.1;locus_tag=AC56_RS23870;partial=true;product=IS3-like element IS911 family transposase;protein_id=WP_032158608.1;start_range=.,1;transl_table=11
NZ_JJLS01000018.1	RefSeq	pseudogene	798	1136	.	-	.	ID=gene-AC56_RS28105;Name=AC56_RS28105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS28105;partial=true;pseudo=true;start_range=.,798
NZ_JJLS01000018.1	Protein Homology	CDS	798	1136	.	-	0	ID=cds-AC56_RS28105;Parent=gene-AC56_RS28105;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016239947.1;locus_tag=AC56_RS28105;partial=true;product=DUF2254 family protein;pseudo=true;start_range=.,798;transl_table=11
NZ_JJLS01000018.1	RefSeq	gene	1199	3196	.	-	.	ID=gene-AC56_RS23865;Name=AC56_RS23865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23865;old_locus_tag=AC56_5058
NZ_JJLS01000018.1	Protein Homology	CDS	1199	3196	.	-	0	ID=cds-WP_001293436.1;Parent=gene-AC56_RS23865;Dbxref=GenBank:WP_001293436.1;Name=WP_001293436.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004119118.1;locus_tag=AC56_RS23865;product=BCCT family transporter;protein_id=WP_001293436.1;transl_table=11
NZ_JJLS01000018.1	RefSeq	gene	3350	3564	.	-	.	ID=gene-AC56_RS23860;Name=AC56_RS23860;end_range=3564,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23860;old_locus_tag=AC56_5059;partial=true
NZ_JJLS01000018.1	Protein Homology	CDS	3350	3564	.	-	2	ID=cds-WP_005133915.1;Parent=gene-AC56_RS23860;Dbxref=GenBank:WP_005133915.1;Name=WP_005133915.1;Ontology_term=GO:0015074;end_range=3564,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611998.1;locus_tag=AC56_RS23860;partial=true;product=IS3 family transposase;protein_id=WP_005133915.1;transl_table=11
##sequence-region NZ_JJLS01000019.1 1 2047
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000019.1	RefSeq	region	1	2047	.	+	.	ID=NZ_JJLS01000019.1:1..2047;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000019.1	RefSeq	gene	1	442	.	+	.	ID=gene-AC56_RS23855;Name=AC56_RS23855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23855;old_locus_tag=AC56_5060;partial=true;start_range=.,1
NZ_JJLS01000019.1	Protein Homology	CDS	1	442	.	+	1	ID=cds-WP_032282453.1;Parent=gene-AC56_RS23855;Dbxref=GenBank:WP_032282453.1;Name=WP_032282453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312145.1;locus_tag=AC56_RS23855;partial=true;product=AsmA-like C-terminal region-containing protein;protein_id=WP_032282453.1;start_range=.,1;transl_table=11
NZ_JJLS01000019.1	RefSeq	gene	781	2047	.	+	.	ID=gene-AC56_RS23850;Name=tldD;end_range=2047,.;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=AC56_RS23850;old_locus_tag=AC56_5061;partial=true
NZ_JJLS01000019.1	Protein Homology	CDS	781	2047	.	+	0	ID=cds-WP_032177623.1;Parent=gene-AC56_RS23850;Dbxref=GenBank:WP_032177623.1;Name=WP_032177623.1;Ontology_term=GO:0006508,GO:0008237;end_range=2047,.;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417711.1;locus_tag=AC56_RS23850;partial=true;product=metalloprotease TldD;protein_id=WP_032177623.1;transl_table=11
##sequence-region NZ_JJLS01000020.1 1 3597
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000020.1	RefSeq	region	1	3597	.	+	.	ID=NZ_JJLS01000020.1:1..3597;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000020.1	RefSeq	gene	1	460	.	+	.	ID=gene-AC56_RS0124430;Name=bglJ;gbkey=Gene;gene=bglJ;gene_biotype=protein_coding;locus_tag=AC56_RS0124430;old_locus_tag=AC56_5062;partial=true;start_range=.,1
NZ_JJLS01000020.1	Protein Homology	CDS	1	460	.	+	1	ID=cds-WP_032209719.1-2;Parent=gene-AC56_RS0124430;Dbxref=GenBank:WP_032209719.1;Name=WP_032209719.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=bglJ;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418786.4;locus_tag=AC56_RS0124430;partial=true;product=DNA-binding transcriptional activator BglJ;protein_id=WP_032209719.1;start_range=.,1;transl_table=11
NZ_JJLS01000020.1	RefSeq	gene	498	1286	.	-	.	ID=gene-AC56_RS23845;Name=fhuF;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=AC56_RS23845;old_locus_tag=AC56_5063
NZ_JJLS01000020.1	Protein Homology	CDS	498	1286	.	-	0	ID=cds-WP_000331559.1-2;Parent=gene-AC56_RS23845;Dbxref=GenBank:WP_000331559.1;Name=WP_000331559.1;Ontology_term=GO:0051537;gbkey=CDS;gene=fhuF;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710108.1;locus_tag=AC56_RS23845;product=siderophore-iron reductase FhuF;protein_id=WP_000331559.1;transl_table=11
NZ_JJLS01000020.1	RefSeq	gene	1427	1663	.	+	.	ID=gene-AC56_RS23840;Name=AC56_RS23840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23840;old_locus_tag=AC56_5064
NZ_JJLS01000020.1	Protein Homology	CDS	1427	1663	.	+	0	ID=cds-WP_001403902.1-2;Parent=gene-AC56_RS23840;Dbxref=GenBank:WP_001403902.1;Name=WP_001403902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313355.3;locus_tag=AC56_RS23840;product=DUF1435 domain-containing protein;protein_id=WP_001403902.1;transl_table=11
NZ_JJLS01000020.1	RefSeq	gene	1702	1788	.	-	.	ID=gene-AC56_RS23835;Name=AC56_RS23835;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS23835;old_locus_tag=AC56_5065
NZ_JJLS01000020.1	tRNAscan-SE	tRNA	1702	1788	.	-	.	ID=rna-AC56_RS23835;Parent=gene-AC56_RS23835;anticodon=(pos:complement(1752..1754));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS23835;product=tRNA-Leu
NZ_JJLS01000020.1	tRNAscan-SE	exon	1702	1788	.	-	.	ID=exon-AC56_RS23835-1;Parent=rna-AC56_RS23835;anticodon=(pos:complement(1752..1754));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS23835;product=tRNA-Leu
NZ_JJLS01000020.1	RefSeq	gene	2097	3128	.	-	.	ID=gene-AC56_RS23830;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=AC56_RS23830;old_locus_tag=AC56_5066
NZ_JJLS01000020.1	Protein Homology	CDS	2097	3128	.	-	0	ID=cds-WP_001272323.1-2;Parent=gene-AC56_RS23830;Dbxref=GenBank:WP_001272323.1;Name=WP_001272323.1;Ontology_term=GO:0006364,GO:0003676,GO:0008990;gbkey=CDS;gene=rsmC;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313356.1;locus_tag=AC56_RS23830;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=WP_001272323.1;transl_table=11
NZ_JJLS01000020.1	RefSeq	gene	3231	3597	.	+	.	ID=gene-AC56_RS23825;Name=holD;end_range=3597,.;gbkey=Gene;gene=holD;gene_biotype=protein_coding;locus_tag=AC56_RS23825;old_locus_tag=AC56_5067;partial=true
NZ_JJLS01000020.1	Protein Homology	CDS	3231	3597	.	+	0	ID=cds-WP_032282454.1;Parent=gene-AC56_RS23825;Dbxref=GenBank:WP_032282454.1;Name=WP_032282454.1;end_range=3597,.;gbkey=CDS;gene=holD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313357.1;locus_tag=AC56_RS23825;partial=true;product=DNA polymerase III subunit psi;protein_id=WP_032282454.1;transl_table=11
##sequence-region NZ_JJLS01000021.1 1 4011
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000021.1	RefSeq	region	1	4011	.	+	.	ID=NZ_JJLS01000021.1:1..4011;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000021.1	RefSeq	pseudogene	1	369	.	+	.	ID=gene-AC56_RS23820;Name=AC56_RS23820;end_range=369,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS23820;old_locus_tag=AC56_5068;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000021.1	Protein Homology	CDS	1	369	.	+	0	ID=cds-AC56_RS23820;Parent=gene-AC56_RS23820;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=369,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000998048.1;locus_tag=AC56_RS23820;partial=true;product=IS66 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000021.1	RefSeq	gene	526	2274	.	+	.	ID=gene-AC56_RS23815;Name=AC56_RS23815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23815;old_locus_tag=AC56_5069
NZ_JJLS01000021.1	Protein Homology	CDS	526	2274	.	+	0	ID=cds-WP_032237877.1;Parent=gene-AC56_RS23815;Dbxref=GenBank:WP_032237877.1;Name=WP_032237877.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001562494.1;locus_tag=AC56_RS23815;product=3'-5' exonuclease;protein_id=WP_032237877.1;transl_table=11
NZ_JJLS01000021.1	RefSeq	gene	2600	3127	.	-	.	ID=gene-AC56_RS23810;Name=sodC;gbkey=Gene;gene=sodC;gene_biotype=protein_coding;locus_tag=AC56_RS23810;old_locus_tag=AC56_5070
NZ_JJLS01000021.1	Protein Homology	CDS	2600	3127	.	-	0	ID=cds-WP_032237878.1;Parent=gene-AC56_RS23810;Dbxref=GenBank:WP_032237878.1;Name=WP_032237878.1;Ontology_term=GO:0004784;gbkey=CDS;gene=sodC;go_function=superoxide dismutase activity|0004784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455977.1;locus_tag=AC56_RS23810;product=superoxide dismutase family protein;protein_id=WP_032237878.1;transl_table=11
NZ_JJLS01000021.1	RefSeq	gene	3357	4011	.	-	.	ID=gene-AC56_RS23805;Name=AC56_RS23805;end_range=4011,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23805;old_locus_tag=AC56_5071;partial=true
NZ_JJLS01000021.1	Protein Homology	CDS	3357	4011	.	-	1	ID=cds-WP_032277616.1-2;Parent=gene-AC56_RS23805;Dbxref=GenBank:WP_032277616.1;Name=WP_032277616.1;Ontology_term=GO:0004803;end_range=4011,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AC56_RS23805;partial=true;product=IS3 family transposase;protein_id=WP_032277616.1;transl_table=11
##sequence-region NZ_JJLS01000022.1 1 10013
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000022.1	RefSeq	region	1	10013	.	+	.	ID=NZ_JJLS01000022.1:1..10013;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000022.1	RefSeq	pseudogene	1	262	.	+	.	ID=gene-AC56_RS23800;Name=AC56_RS23800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS23800;old_locus_tag=AC56_5072;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000022.1	Protein Homology	CDS	1	262	.	+	1	ID=cds-AC56_RS23800;Parent=gene-AC56_RS23800;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS23800;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000022.1	RefSeq	gene	669	1937	.	-	.	ID=gene-AC56_RS32530;Name=AC56_RS32530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS32530;old_locus_tag=AC56_5073
NZ_JJLS01000022.1	GeneMarkS-2+	CDS	669	1937	.	-	0	ID=cds-WP_162752760.1;Parent=gene-AC56_RS32530;Dbxref=GenBank:WP_162752760.1;Name=WP_162752760.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS32530;product=hypothetical protein;protein_id=WP_162752760.1;transl_table=11
NZ_JJLS01000022.1	RefSeq	gene	1930	2562	.	-	.	ID=gene-AC56_RS0124445;Name=AC56_RS0124445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0124445
NZ_JJLS01000022.1	Protein Homology	CDS	1930	2562	.	-	0	ID=cds-WP_032277700.1;Parent=gene-AC56_RS0124445;Dbxref=GenBank:WP_032277700.1;Name=WP_032277700.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575727.1;locus_tag=AC56_RS0124445;product=ATP-binding cassette domain-containing protein;protein_id=WP_032277700.1;transl_table=11
NZ_JJLS01000022.1	RefSeq	gene	2555	3328	.	-	.	ID=gene-AC56_RS23795;Name=AC56_RS23795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23795;old_locus_tag=AC56_5074
NZ_JJLS01000022.1	GeneMarkS-2+	CDS	2555	3328	.	-	0	ID=cds-WP_126750387.1;Parent=gene-AC56_RS23795;Dbxref=GenBank:WP_126750387.1;Name=WP_126750387.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS23795;product=hypothetical protein;protein_id=WP_126750387.1;transl_table=11
NZ_JJLS01000022.1	RefSeq	gene	3291	4499	.	-	.	ID=gene-AC56_RS23790;Name=AC56_RS23790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23790;old_locus_tag=AC56_5075
NZ_JJLS01000022.1	Protein Homology	CDS	3291	4499	.	-	0	ID=cds-WP_032277699.1;Parent=gene-AC56_RS23790;Dbxref=GenBank:WP_032277699.1;Name=WP_032277699.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF014385.6;locus_tag=AC56_RS23790;product=TolC family protein;protein_id=WP_032277699.1;transl_table=11
NZ_JJLS01000022.1	RefSeq	gene	4496	5503	.	-	.	ID=gene-AC56_RS23785;Name=AC56_RS23785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23785;old_locus_tag=AC56_5076
NZ_JJLS01000022.1	Protein Homology	CDS	4496	5503	.	-	0	ID=cds-WP_162752761.1;Parent=gene-AC56_RS23785;Dbxref=GenBank:WP_162752761.1;Name=WP_162752761.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: protein motif:HMM:NF014717.6;locus_tag=AC56_RS23785;product=ABC transporter permease;protein_id=WP_162752761.1;transl_table=11
NZ_JJLS01000022.1	RefSeq	gene	5805	6836	.	-	.	ID=gene-AC56_RS0124450;Name=AC56_RS0124450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0124450;old_locus_tag=AC56_5077
NZ_JJLS01000022.1	Protein Homology	CDS	5805	6836	.	-	0	ID=cds-WP_032277697.1;Parent=gene-AC56_RS0124450;Dbxref=GenBank:WP_032277697.1;Name=WP_032277697.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011787828.1;locus_tag=AC56_RS0124450;product=IS630 family transposase;protein_id=WP_032277697.1;transl_table=11
NZ_JJLS01000022.1	RefSeq	gene	7110	8276	.	+	.	ID=gene-AC56_RS23780;Name=sopA;gbkey=Gene;gene=sopA;gene_biotype=protein_coding;locus_tag=AC56_RS23780;old_locus_tag=AC56_5078
NZ_JJLS01000022.1	Protein Homology	CDS	7110	8276	.	+	0	ID=cds-WP_001238646.1;Parent=gene-AC56_RS23780;Dbxref=GenBank:WP_001238646.1;Name=WP_001238646.1;gbkey=CDS;gene=sopA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052640.1;locus_tag=AC56_RS23780;product=plasmid-partitioning protein SopA;protein_id=WP_001238646.1;transl_table=11
NZ_JJLS01000022.1	RefSeq	gene	8276	9247	.	+	.	ID=gene-AC56_RS23775;Name=AC56_RS23775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23775;old_locus_tag=AC56_5079
NZ_JJLS01000022.1	Protein Homology	CDS	8276	9247	.	+	0	ID=cds-WP_001575734.1;Parent=gene-AC56_RS23775;Dbxref=GenBank:WP_001575734.1;Name=WP_001575734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000817027.1;locus_tag=AC56_RS23775;product=ParB/RepB/Spo0J family plasmid partition protein;protein_id=WP_001575734.1;transl_table=11
NZ_JJLS01000022.1	RefSeq	pseudogene	9583	9753	.	+	.	ID=gene-AC56_RS30785;Name=AC56_RS30785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS30785;old_locus_tag=AC56_5080;partial=true;pseudo=true;start_range=.,9583
NZ_JJLS01000022.1	Protein Homology	CDS	9583	9753	.	+	0	ID=cds-AC56_RS30785;Parent=gene-AC56_RS30785;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858335.1;locus_tag=AC56_RS30785;partial=true;product=hypothetical protein;pseudo=true;start_range=.,9583;transl_table=11
##sequence-region NZ_JJLS01000023.1 1 2489
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000023.1	RefSeq	region	1	2489	.	+	.	ID=NZ_JJLS01000023.1:1..2489;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000023.1	RefSeq	gene	64	1209	.	+	.	ID=gene-AC56_RS23770;Name=AC56_RS23770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23770;old_locus_tag=AC56_5081
NZ_JJLS01000023.1	Protein Homology	CDS	64	1209	.	+	0	ID=cds-WP_050439830.1;Parent=gene-AC56_RS23770;Dbxref=GenBank:WP_050439830.1;Name=WP_050439830.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001691837.1;locus_tag=AC56_RS23770;product=IS30 family transposase;protein_id=WP_050439830.1;transl_table=11
NZ_JJLS01000023.1	RefSeq	gene	2097	2345	.	-	.	ID=gene-AC56_RS33640;Name=AC56_RS33640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33640
NZ_JJLS01000023.1	Protein Homology	CDS	2097	2345	.	-	0	ID=cds-WP_349237777.1;Parent=gene-AC56_RS33640;Dbxref=GenBank:WP_349237777.1;Name=WP_349237777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001340384.1;locus_tag=AC56_RS33640;product=hypothetical protein;protein_id=WP_349237777.1;transl_table=11
NZ_JJLS01000023.1	RefSeq	gene	2327	2489	.	-	.	ID=gene-AC56_RS33645;Name=AC56_RS33645;end_range=2489,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33645;old_locus_tag=AC56_5082;partial=true
NZ_JJLS01000023.1	Protein Homology	CDS	2327	2489	.	-	1	ID=cds-WP_001395102.1;Parent=gene-AC56_RS33645;Dbxref=GenBank:WP_001395102.1;Name=WP_001395102.1;end_range=2489,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS33645;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_001395102.1;transl_table=11
##sequence-region NZ_JJLS01000024.1 1 2052
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000024.1	RefSeq	region	1	2052	.	+	.	ID=NZ_JJLS01000024.1:1..2052;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000024.1	RefSeq	gene	1	366	.	+	.	ID=gene-AC56_RS23760;Name=AC56_RS23760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23760;old_locus_tag=AC56_5083;partial=true;start_range=.,1
NZ_JJLS01000024.1	Protein Homology	CDS	1	366	.	+	0	ID=cds-WP_032277593.1;Parent=gene-AC56_RS23760;Dbxref=GenBank:WP_032277593.1;Name=WP_032277593.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748652.1;locus_tag=AC56_RS23760;partial=true;product=HNH endonuclease;protein_id=WP_032277593.1;start_range=.,1;transl_table=11
NZ_JJLS01000024.1	RefSeq	gene	698	889	.	-	.	ID=gene-AC56_RS23755;Name=AC56_RS23755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23755;old_locus_tag=AC56_5085
NZ_JJLS01000024.1	Protein Homology	CDS	698	889	.	-	0	ID=cds-WP_001027516.1;Parent=gene-AC56_RS23755;Dbxref=GenBank:WP_001027516.1;Name=WP_001027516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238862.1;locus_tag=AC56_RS23755;product=hypothetical protein;protein_id=WP_001027516.1;transl_table=11
NZ_JJLS01000024.1	RefSeq	gene	886	1308	.	-	.	ID=gene-AC56_RS23750;Name=AC56_RS23750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23750;old_locus_tag=AC56_5086
NZ_JJLS01000024.1	Protein Homology	CDS	886	1308	.	-	0	ID=cds-WP_000271709.1;Parent=gene-AC56_RS23750;Dbxref=GenBank:WP_000271709.1;Name=WP_000271709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052650.1;locus_tag=AC56_RS23750;product=DUF1380 family protein;protein_id=WP_000271709.1;transl_table=11
NZ_JJLS01000024.1	RefSeq	gene	1355	1780	.	-	.	ID=gene-AC56_RS23745;Name=AC56_RS23745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23745;old_locus_tag=AC56_5087
NZ_JJLS01000024.1	Protein Homology	CDS	1355	1780	.	-	0	ID=cds-WP_001546490.1;Parent=gene-AC56_RS23745;Dbxref=GenBank:WP_001546490.1;Name=WP_001546490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001198918.1;locus_tag=AC56_RS23745;product=antirestriction protein;protein_id=WP_001546490.1;transl_table=11
##sequence-region NZ_JJLS01000025.1 1 3991
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000025.1	RefSeq	region	1	3991	.	+	.	ID=NZ_JJLS01000025.1:1..3991;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000025.1	RefSeq	pseudogene	1	166	.	+	.	ID=gene-AC56_RS33085;Name=AC56_RS33085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33085;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000025.1	Protein Homology	CDS	1	166	.	+	1	ID=cds-AC56_RS33085;Parent=gene-AC56_RS33085;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052644.1;locus_tag=AC56_RS33085;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000025.1	RefSeq	gene	276	1178	.	+	.	ID=gene-AC56_RS23740;Name=AC56_RS23740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23740;old_locus_tag=AC56_5089
NZ_JJLS01000025.1	Protein Homology	CDS	276	1178	.	+	0	ID=cds-WP_077746160.1;Parent=gene-AC56_RS23740;Dbxref=GenBank:WP_077746160.1;Name=WP_077746160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052643.1;locus_tag=AC56_RS23740;product=DUF1281 domain-containing protein;protein_id=WP_077746160.1;transl_table=11
NZ_JJLS01000025.1	RefSeq	gene	1175	1486	.	+	.	ID=gene-AC56_RS30805;Name=AC56_RS30805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS30805
NZ_JJLS01000025.1	Protein Homology	CDS	1175	1486	.	+	0	ID=cds-WP_032144078.1;Parent=gene-AC56_RS30805;Dbxref=GenBank:WP_032144078.1;Name=WP_032144078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858330.2;locus_tag=AC56_RS30805;product=hypothetical protein;protein_id=WP_032144078.1;transl_table=11
NZ_JJLS01000025.1	RefSeq	gene	1563	2246	.	+	.	ID=gene-AC56_RS23735;Name=AC56_RS23735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23735;old_locus_tag=AC56_5092
NZ_JJLS01000025.1	Protein Homology	CDS	1563	2246	.	+	0	ID=cds-WP_000085884.1;Parent=gene-AC56_RS23735;Dbxref=GenBank:WP_000085884.1;Name=WP_000085884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052645.1;locus_tag=AC56_RS23735;product=DNA methylase;protein_id=WP_000085884.1;transl_table=11
NZ_JJLS01000025.1	RefSeq	gene	2247	2468	.	+	.	ID=gene-AC56_RS23730;Name=AC56_RS23730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23730;old_locus_tag=AC56_5093
NZ_JJLS01000025.1	Protein Homology	CDS	2247	2468	.	+	0	ID=cds-WP_001104865.1;Parent=gene-AC56_RS23730;Dbxref=GenBank:WP_001104865.1;Name=WP_001104865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_958723.1;locus_tag=AC56_RS23730;product=hypothetical protein;protein_id=WP_001104865.1;transl_table=11
NZ_JJLS01000025.1	RefSeq	gene	2398	2916	.	+	.	ID=gene-AC56_RS23725;Name=AC56_RS23725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23725;old_locus_tag=AC56_5094
NZ_JJLS01000025.1	Protein Homology	CDS	2398	2916	.	+	0	ID=cds-WP_223156508.1;Parent=gene-AC56_RS23725;Dbxref=GenBank:WP_223156508.1;Name=WP_223156508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052646.1;locus_tag=AC56_RS23725;product=DUF1380 family protein;protein_id=WP_223156508.1;transl_table=11
NZ_JJLS01000025.1	RefSeq	gene	2961	3731	.	+	.	ID=gene-AC56_RS23720;Name=AC56_RS23720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23720;old_locus_tag=AC56_5095
NZ_JJLS01000025.1	Protein Homology	CDS	2961	3731	.	+	0	ID=cds-WP_001006247.1;Parent=gene-AC56_RS23720;Dbxref=GenBank:WP_001006247.1;Name=WP_001006247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001523829.1;locus_tag=AC56_RS23720;product=hypothetical protein;protein_id=WP_001006247.1;transl_table=11
##sequence-region NZ_JJLS01000026.1 1 1394
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000026.1	RefSeq	region	1	1394	.	+	.	ID=NZ_JJLS01000026.1:1..1394;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000026.1	RefSeq	pseudogene	1	437	.	+	.	ID=gene-AC56_RS0124475;Name=AC56_RS0124475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0124475;old_locus_tag=AC56_5096;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000026.1	Protein Homology	CDS	1	437	.	+	2	ID=cds-AC56_RS0124475;Parent=gene-AC56_RS0124475;Note=internal stop%3B incomplete%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000055676.1;locus_tag=AC56_RS0124475;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000026.1	RefSeq	gene	1008	1394	.	+	.	ID=gene-AC56_RS23715;Name=AC56_RS23715;end_range=1394,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23715;old_locus_tag=AC56_5098;partial=true
NZ_JJLS01000026.1	Protein Homology	CDS	1008	1394	.	+	0	ID=cds-WP_032203470.1;Parent=gene-AC56_RS23715;Dbxref=GenBank:WP_032203470.1;Name=WP_032203470.1;end_range=1394,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS23715;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032203470.1;transl_table=11
##sequence-region NZ_JJLS01000027.1 1 1674
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000027.1	RefSeq	region	1	1674	.	+	.	ID=NZ_JJLS01000027.1:1..1674;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000027.1	RefSeq	gene	83	159	.	+	.	ID=gene-AC56_RS23705;Name=AC56_RS23705;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS23705;old_locus_tag=AC56_5100
NZ_JJLS01000027.1	tRNAscan-SE	tRNA	83	159	.	+	.	ID=rna-AC56_RS23705;Parent=gene-AC56_RS23705;anticodon=(pos:117..119);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS23705;product=tRNA-Met
NZ_JJLS01000027.1	tRNAscan-SE	exon	83	159	.	+	.	ID=exon-AC56_RS23705-1;Parent=rna-AC56_RS23705;anticodon=(pos:117..119);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS23705;product=tRNA-Met
NZ_JJLS01000027.1	RefSeq	gene	207	281	.	+	.	ID=gene-AC56_RS23700;Name=AC56_RS23700;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS23700;old_locus_tag=AC56_5101
NZ_JJLS01000027.1	tRNAscan-SE	tRNA	207	281	.	+	.	ID=rna-AC56_RS23700;Parent=gene-AC56_RS23700;anticodon=(pos:239..241);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS23700;product=tRNA-Gln
NZ_JJLS01000027.1	tRNAscan-SE	exon	207	281	.	+	.	ID=exon-AC56_RS23700-1;Parent=rna-AC56_RS23700;anticodon=(pos:239..241);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS23700;product=tRNA-Gln
NZ_JJLS01000027.1	RefSeq	gene	319	393	.	+	.	ID=gene-AC56_RS23695;Name=AC56_RS23695;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS23695;old_locus_tag=AC56_5102
NZ_JJLS01000027.1	tRNAscan-SE	tRNA	319	393	.	+	.	ID=rna-AC56_RS23695;Parent=gene-AC56_RS23695;anticodon=(pos:351..353);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS23695;product=tRNA-Gln
NZ_JJLS01000027.1	tRNAscan-SE	exon	319	393	.	+	.	ID=exon-AC56_RS23695-1;Parent=rna-AC56_RS23695;anticodon=(pos:351..353);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS23695;product=tRNA-Gln
NZ_JJLS01000027.1	RefSeq	gene	547	1674	.	-	.	ID=gene-AC56_RS23690;Name=ubiF;end_range=1674,.;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=AC56_RS23690;old_locus_tag=AC56_5103;partial=true
NZ_JJLS01000027.1	Protein Homology	CDS	547	1674	.	-	0	ID=cds-WP_050440193.1;Parent=gene-AC56_RS23690;Dbxref=GenBank:WP_050440193.1;Name=WP_050440193.1;Ontology_term=GO:0006744,GO:0016709;end_range=1674,.;gbkey=CDS;gene=ubiF;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415195.1;locus_tag=AC56_RS23690;partial=true;product=3-demethoxyubiquinol 3-hydroxylase;protein_id=WP_050440193.1;transl_table=11
##sequence-region NZ_JJLS01000028.1 1 1417
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000028.1	RefSeq	region	1	1417	.	+	.	ID=NZ_JJLS01000028.1:1..1417;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000028.1	RefSeq	pseudogene	1	343	.	+	.	ID=gene-AC56_RS23685;Name=bluR;gbkey=Gene;gene=bluR;gene_biotype=pseudogene;locus_tag=AC56_RS23685;old_locus_tag=AC56_5104;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000028.1	Protein Homology	CDS	1	343	.	+	1	ID=cds-AC56_RS23685;Parent=gene-AC56_RS23685;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=bluR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415680.1;locus_tag=AC56_RS23685;partial=true;product=DNA-binding transcriptional repressor BluR;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000028.1	RefSeq	pseudogene	564	968	.	+	.	ID=gene-AC56_RS23680;Name=AC56_RS23680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS23680;old_locus_tag=AC56_5105;pseudo=true
NZ_JJLS01000028.1	Protein Homology	CDS	564	968	.	+	0	ID=cds-AC56_RS23680;Parent=gene-AC56_RS23680;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415679.1;locus_tag=AC56_RS23680;product=DUF1398 domain-containing protein;pseudo=true;transl_table=11
NZ_JJLS01000028.1	RefSeq	gene	1021	1131	.	+	.	ID=gene-AC56_RS32535;Name=AC56_RS32535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS32535
NZ_JJLS01000028.1	Protein Homology	CDS	1021	1131	.	+	0	ID=cds-WP_032082692.1;Parent=gene-AC56_RS32535;Dbxref=GenBank:WP_032082692.1;Name=WP_032082692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518767.1;locus_tag=AC56_RS32535;product=hypothetical protein;protein_id=WP_032082692.1;transl_table=11
NZ_JJLS01000028.1	RefSeq	gene	1280	1417	.	+	.	ID=gene-AC56_RS28150;Name=AC56_RS28150;end_range=1417,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS28150;old_locus_tag=AC56_5106;partial=true
NZ_JJLS01000028.1	Protein Homology	CDS	1280	1417	.	+	0	ID=cds-WP_001404215.1;Parent=gene-AC56_RS28150;Dbxref=GenBank:WP_001404215.1;Name=WP_001404215.1;Ontology_term=GO:0006313;end_range=1417,.;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS28150;partial=true;product=IS1 family transposase;protein_id=WP_001404215.1;transl_table=11
##sequence-region NZ_JJLS01000029.1 1 1012
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000029.1	RefSeq	region	1	1012	.	+	.	ID=NZ_JJLS01000029.1:1..1012;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000029.1	RefSeq	gene	1	232	.	+	.	ID=gene-AC56_RS23675;Name=AC56_RS23675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23675;old_locus_tag=AC56_5107;partial=true;start_range=.,1
NZ_JJLS01000029.1	Protein Homology	CDS	1	232	.	+	1	ID=cds-WP_032282465.1;Parent=gene-AC56_RS23675;Dbxref=GenBank:WP_032282465.1;Name=WP_032282465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS23675;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032282465.1;start_range=.,1;transl_table=11
NZ_JJLS01000029.1	RefSeq	pseudogene	381	533	.	-	.	ID=gene-AC56_RS33820;Name=AC56_RS33820;end_range=533,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33820;partial=true;pseudo=true;start_range=.,381
NZ_JJLS01000029.1	Protein Homology	CDS	381	533	.	-	0	ID=cds-AC56_RS33820;Parent=gene-AC56_RS33820;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=533,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311542.2;locus_tag=AC56_RS33820;partial=true;product=AIDA repeat-containing protein;pseudo=true;start_range=.,381;transl_table=11
NZ_JJLS01000029.1	RefSeq	pseudogene	591	1012	.	-	.	ID=gene-AC56_RS23670;Name=AC56_RS23670;end_range=1012,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS23670;old_locus_tag=AC56_5109;partial=true;pseudo=true
NZ_JJLS01000029.1	Protein Homology	CDS	591	1012	.	-	2	ID=cds-AC56_RS23670;Parent=gene-AC56_RS23670;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=1012,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS23670;partial=true;product=IS5-like element IS903B family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000030.1 1 6946
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000030.1	RefSeq	region	1	6946	.	+	.	ID=NZ_JJLS01000030.1:1..6946;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000030.1	RefSeq	gene	1	596	.	-	.	ID=gene-AC56_RS23665;Name=AC56_RS23665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23665;old_locus_tag=AC56_5110;partial=true;start_range=.,1
NZ_JJLS01000030.1	Protein Homology	CDS	1	596	.	-	0	ID=cds-WP_000031754.1;Parent=gene-AC56_RS23665;Dbxref=GenBank:WP_000031754.1;Name=WP_000031754.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=AC56_RS23665;partial=true;product=GTP-binding protein;protein_id=WP_000031754.1;start_range=.,1;transl_table=11
NZ_JJLS01000030.1	RefSeq	gene	667	2781	.	-	.	ID=gene-AC56_RS23660;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=AC56_RS23660;old_locus_tag=AC56_5111
NZ_JJLS01000030.1	Protein Homology	CDS	667	2781	.	-	0	ID=cds-WP_000124700.1;Parent=gene-AC56_RS23660;Dbxref=GenBank:WP_000124700.1;Name=WP_000124700.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1;locus_tag=AC56_RS23660;product=elongation factor G;protein_id=WP_000124700.1;transl_table=11
NZ_JJLS01000030.1	RefSeq	gene	2878	3348	.	-	.	ID=gene-AC56_RS23655;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=AC56_RS23655;old_locus_tag=AC56_5112
NZ_JJLS01000030.1	Protein Homology	CDS	2878	3348	.	-	0	ID=cds-WP_001138043.1;Parent=gene-AC56_RS23655;Dbxref=GenBank:WP_001138043.1;Name=WP_001138043.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=AC56_RS23655;product=30S ribosomal protein S7;protein_id=WP_001138043.1;transl_table=11
NZ_JJLS01000030.1	RefSeq	gene	3445	3819	.	-	.	ID=gene-AC56_RS23650;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=AC56_RS23650;old_locus_tag=AC56_5113
NZ_JJLS01000030.1	Protein Homology	CDS	3445	3819	.	-	0	ID=cds-WP_000246815.1;Parent=gene-AC56_RS23650;Dbxref=GenBank:WP_000246815.1;Name=WP_000246815.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1;locus_tag=AC56_RS23650;product=30S ribosomal protein S12;protein_id=WP_000246815.1;transl_table=11
NZ_JJLS01000030.1	RefSeq	gene	3945	4232	.	-	.	ID=gene-AC56_RS23645;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=AC56_RS23645;old_locus_tag=AC56_5114
NZ_JJLS01000030.1	Protein Homology	CDS	3945	4232	.	-	0	ID=cds-WP_000903373.1;Parent=gene-AC56_RS23645;Dbxref=GenBank:WP_000903373.1;Name=WP_000903373.1;Ontology_term=GO:0002143;gbkey=CDS;gene=tusB;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417802.1;locus_tag=AC56_RS23645;product=sulfurtransferase complex subunit TusB;protein_id=WP_000903373.1;transl_table=11
NZ_JJLS01000030.1	RefSeq	gene	4240	4599	.	-	.	ID=gene-AC56_RS23640;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=AC56_RS23640;old_locus_tag=AC56_5115
NZ_JJLS01000030.1	Protein Homology	CDS	4240	4599	.	-	0	ID=cds-WP_000820714.1;Parent=gene-AC56_RS23640;Dbxref=GenBank:WP_000820714.1;Name=WP_000820714.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417803.1;locus_tag=AC56_RS23640;product=sulfurtransferase complex subunit TusC;protein_id=WP_000820714.1;transl_table=11
NZ_JJLS01000030.1	RefSeq	gene	4599	4985	.	-	.	ID=gene-AC56_RS23635;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=AC56_RS23635;old_locus_tag=AC56_5116
NZ_JJLS01000030.1	Protein Homology	CDS	4599	4985	.	-	0	ID=cds-WP_001209680.1;Parent=gene-AC56_RS23635;Dbxref=GenBank:WP_001209680.1;Name=WP_001209680.1;Ontology_term=GO:0008033,GO:0016783;gbkey=CDS;gene=tusD;go_function=sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417804.1;locus_tag=AC56_RS23635;product=sulfurtransferase complex subunit TusD;protein_id=WP_001209680.1;transl_table=11
NZ_JJLS01000030.1	RefSeq	gene	4985	5707	.	-	.	ID=gene-AC56_RS23630;Name=AC56_RS23630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23630;old_locus_tag=AC56_5117
NZ_JJLS01000030.1	Protein Homology	CDS	4985	5707	.	-	0	ID=cds-WP_000091466.1;Parent=gene-AC56_RS23630;Dbxref=GenBank:WP_000091466.1;Name=WP_000091466.1;Ontology_term=GO:0006355,GO:0007165,GO:0003677,GO:0003700,GO:0005515,GO:0140110;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,protein binding|0005515||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709120.2;locus_tag=AC56_RS23630;product=helix-turn-helix transcriptional regulator;protein_id=WP_000091466.1;transl_table=11
NZ_JJLS01000030.1	RefSeq	gene	5874	6686	.	-	.	ID=gene-AC56_RS23625;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=AC56_RS23625;old_locus_tag=AC56_5118
NZ_JJLS01000030.1	Protein Homology	CDS	5874	6686	.	-	0	ID=cds-WP_000838261.1;Parent=gene-AC56_RS23625;Dbxref=GenBank:WP_000838261.1;Name=WP_000838261.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;gene=fkpA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312225.1;locus_tag=AC56_RS23625;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000838261.1;transl_table=11
##sequence-region NZ_JJLS01000031.1 1 1660
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000031.1	RefSeq	region	1	1660	.	+	.	ID=NZ_JJLS01000031.1:1..1660;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000031.1	RefSeq	gene	1	680	.	-	.	ID=gene-AC56_RS23620;Name=AC56_RS23620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23620;old_locus_tag=AC56_5119;partial=true;start_range=.,1
NZ_JJLS01000031.1	Protein Homology	CDS	1	680	.	-	0	ID=cds-WP_032277613.1;Parent=gene-AC56_RS23620;Dbxref=GenBank:WP_032277613.1;Name=WP_032277613.1;Ontology_term=GO:0009307,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005767712.1;locus_tag=AC56_RS23620;partial=true;product=type I restriction-modification system subunit M;protein_id=WP_032277613.1;start_range=.,1;transl_table=11
NZ_JJLS01000031.1	RefSeq	gene	944	1660	.	+	.	ID=gene-AC56_RS23615;Name=AC56_RS23615;end_range=1660,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23615;old_locus_tag=AC56_5120;partial=true
NZ_JJLS01000031.1	Protein Homology	CDS	944	1660	.	+	0	ID=cds-WP_032282467.1;Parent=gene-AC56_RS23615;Dbxref=GenBank:WP_032282467.1;Name=WP_032282467.1;Ontology_term=GO:0003924,GO:0005525;end_range=1660,.;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708764.1;locus_tag=AC56_RS23615;partial=true;product=GTPase family protein;protein_id=WP_032282467.1;transl_table=11
##sequence-region NZ_JJLS01000032.1 1 3198
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000032.1	RefSeq	region	1	3198	.	+	.	ID=NZ_JJLS01000032.1:1..3198;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000032.1	RefSeq	gene	1	409	.	-	.	ID=gene-AC56_RS23610;Name=AC56_RS23610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23610;old_locus_tag=AC56_5121;partial=true;start_range=.,1
NZ_JJLS01000032.1	Protein Homology	CDS	1	409	.	-	0	ID=cds-WP_032282468.1;Parent=gene-AC56_RS23610;Dbxref=GenBank:WP_032282468.1;Name=WP_032282468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS23610;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032282468.1;start_range=.,1;transl_table=11
NZ_JJLS01000032.1	RefSeq	pseudogene	430	1224	.	-	.	ID=gene-AC56_RS23605;Name=AC56_RS23605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS23605;old_locus_tag=AC56_5122;partial=true;pseudo=true;start_range=.,430
NZ_JJLS01000032.1	Protein Homology	CDS	430	1224	.	-	0	ID=cds-AC56_RS23605;Parent=gene-AC56_RS23605;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709679.2;locus_tag=AC56_RS23605;partial=true;product=aldose-1-epimerase;pseudo=true;start_range=.,430;transl_table=11
NZ_JJLS01000032.1	RefSeq	gene	1362	2603	.	-	.	ID=gene-AC56_RS23600;Name=yihS;gbkey=Gene;gene=yihS;gene_biotype=protein_coding;locus_tag=AC56_RS23600;old_locus_tag=AC56_5123
NZ_JJLS01000032.1	Protein Homology	CDS	1362	2603	.	-	0	ID=cds-WP_000870916.1;Parent=gene-AC56_RS23600;Dbxref=GenBank:WP_000870916.1;Name=WP_000870916.1;gbkey=CDS;gene=yihS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418316.4;locus_tag=AC56_RS23600;product=sulfoquinovose isomerase;protein_id=WP_000870916.1;transl_table=11
NZ_JJLS01000032.1	RefSeq	gene	2620	3198	.	-	.	ID=gene-AC56_RS0124480;Name=yihT;end_range=3198,.;gbkey=Gene;gene=yihT;gene_biotype=protein_coding;locus_tag=AC56_RS0124480;partial=true
NZ_JJLS01000032.1	Protein Homology	CDS	2620	3198	.	-	0	ID=cds-WP_032282470.1;Parent=gene-AC56_RS0124480;Dbxref=GenBank:WP_032282470.1;Name=WP_032282470.1;end_range=3198,.;gbkey=CDS;gene=yihT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418317.1;locus_tag=AC56_RS0124480;partial=true;product=sulfofructosephosphate aldolase;protein_id=WP_032282470.1;transl_table=11
##sequence-region NZ_JJLS01000033.1 1 545
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000033.1	RefSeq	region	1	545	.	+	.	ID=NZ_JJLS01000033.1:1..545;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000033.1	RefSeq	gene	1	247	.	+	.	ID=gene-AC56_RS0124485;Name=AC56_RS0124485;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC56_RS0124485;partial=true;start_range=.,1
NZ_JJLS01000033.1	cmsearch	rRNA	1	247	.	+	.	ID=rna-AC56_RS0124485;Parent=gene-AC56_RS0124485;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS0124485;partial=true;product=16S ribosomal RNA;start_range=.,1
NZ_JJLS01000033.1	cmsearch	exon	1	247	.	+	.	ID=exon-AC56_RS0124485-1;Parent=rna-AC56_RS0124485;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS0124485;partial=true;product=16S ribosomal RNA;start_range=.,1
NZ_JJLS01000033.1	RefSeq	gene	333	408	.	+	.	ID=gene-AC56_RS23595;Name=AC56_RS23595;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS23595;old_locus_tag=AC56_5125
NZ_JJLS01000033.1	tRNAscan-SE	tRNA	333	408	.	+	.	ID=rna-AC56_RS23595;Parent=gene-AC56_RS23595;anticodon=(pos:367..369);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS23595;product=tRNA-Glu
NZ_JJLS01000033.1	tRNAscan-SE	exon	333	408	.	+	.	ID=exon-AC56_RS23595-1;Parent=rna-AC56_RS23595;anticodon=(pos:367..369);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS23595;product=tRNA-Glu
##sequence-region NZ_JJLS01000034.1 1 325
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000034.1	RefSeq	region	1	325	.	+	.	ID=NZ_JJLS01000034.1:1..325;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000034.1	RefSeq	gene	1	325	.	+	.	ID=gene-AC56_RS23590;Name=AC56_RS23590;end_range=325,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23590;old_locus_tag=AC56_5126;partial=true;start_range=.,1
NZ_JJLS01000034.1	Protein Homology	CDS	1	325	.	+	1	ID=cds-WP_032282471.1;Parent=gene-AC56_RS23590;Dbxref=GenBank:WP_032282471.1;Name=WP_032282471.1;end_range=325,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748652.1;locus_tag=AC56_RS23590;partial=true;product=group II intron maturase-specific domain-containing protein;protein_id=WP_032282471.1;start_range=.,1;transl_table=11
##sequence-region NZ_JJLS01000035.1 1 7334
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000035.1	RefSeq	region	1	7334	.	+	.	ID=NZ_JJLS01000035.1:1..7334;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000035.1	RefSeq	gene	1	655	.	+	.	ID=gene-AC56_RS23585;Name=AC56_RS23585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23585;old_locus_tag=AC56_5127;partial=true;start_range=.,1
NZ_JJLS01000035.1	Protein Homology	CDS	1	655	.	+	1	ID=cds-WP_032277616.1-3;Parent=gene-AC56_RS23585;Dbxref=GenBank:WP_032277616.1;Name=WP_032277616.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AC56_RS23585;partial=true;product=IS3 family transposase;protein_id=WP_032277616.1;start_range=.,1;transl_table=11
NZ_JJLS01000035.1	RefSeq	pseudogene	694	996	.	-	.	ID=gene-AC56_RS23580;Name=AC56_RS23580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS23580;old_locus_tag=AC56_5128;partial=true;pseudo=true;start_range=.,694
NZ_JJLS01000035.1	Protein Homology	CDS	694	996	.	-	0	ID=cds-AC56_RS23580;Parent=gene-AC56_RS23580;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=AC56_RS23580;partial=true;product=ATP-binding protein;pseudo=true;start_range=.,694;transl_table=11
NZ_JJLS01000035.1	RefSeq	gene	993	2015	.	-	.	ID=gene-AC56_RS23575;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=AC56_RS23575;old_locus_tag=AC56_5129
NZ_JJLS01000035.1	Protein Homology	CDS	993	2015	.	-	0	ID=cds-WP_032277759.1;Parent=gene-AC56_RS23575;Dbxref=GenBank:WP_032277759.1;Name=WP_032277759.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=AC56_RS23575;product=IS21-like element IS100 family transposase;protein_id=WP_032277759.1;transl_table=11
NZ_JJLS01000035.1	RefSeq	gene	2074	2667	.	+	.	ID=gene-AC56_RS23570;Name=AC56_RS23570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23570;old_locus_tag=AC56_5130
NZ_JJLS01000035.1	Protein Homology	CDS	2074	2667	.	+	0	ID=cds-WP_248784838.1;Parent=gene-AC56_RS23570;Dbxref=GenBank:WP_248784838.1;Name=WP_248784838.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012335.6;locus_tag=AC56_RS23570;product=zinc-binding dehydrogenase;protein_id=WP_248784838.1;transl_table=11
NZ_JJLS01000035.1	RefSeq	gene	2725	3381	.	-	.	ID=gene-AC56_RS23565;Name=AC56_RS23565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23565;old_locus_tag=AC56_5131
NZ_JJLS01000035.1	Protein Homology	CDS	2725	3381	.	-	0	ID=cds-WP_001724255.1;Parent=gene-AC56_RS23565;Dbxref=GenBank:WP_001724255.1;Name=WP_001724255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000145474.1;locus_tag=AC56_RS23565;product=TetR/AcrR family transcriptional regulator;protein_id=WP_001724255.1;transl_table=11
NZ_JJLS01000035.1	RefSeq	gene	3629	4906	.	-	.	ID=gene-AC56_RS23560;Name=AC56_RS23560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23560;old_locus_tag=AC56_5133
NZ_JJLS01000035.1	Protein Homology	CDS	3629	4906	.	-	0	ID=cds-WP_032277758.1;Parent=gene-AC56_RS23560;Dbxref=GenBank:WP_032277758.1;Name=WP_032277758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016239947.1;locus_tag=AC56_RS23560;product=DUF2254 domain-containing protein;protein_id=WP_032277758.1;transl_table=11
NZ_JJLS01000035.1	RefSeq	gene	4969	6966	.	-	.	ID=gene-AC56_RS23555;Name=AC56_RS23555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23555;old_locus_tag=AC56_5134
NZ_JJLS01000035.1	Protein Homology	CDS	4969	6966	.	-	0	ID=cds-WP_001293436.1-2;Parent=gene-AC56_RS23555;Dbxref=GenBank:WP_001293436.1;Name=WP_001293436.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004119118.1;locus_tag=AC56_RS23555;product=BCCT family transporter;protein_id=WP_001293436.1;transl_table=11
NZ_JJLS01000035.1	RefSeq	gene	7120	7334	.	-	.	ID=gene-AC56_RS23550;Name=AC56_RS23550;end_range=7334,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23550;old_locus_tag=AC56_5135;partial=true
NZ_JJLS01000035.1	Protein Homology	CDS	7120	7334	.	-	2	ID=cds-WP_005133915.1-2;Parent=gene-AC56_RS23550;Dbxref=GenBank:WP_005133915.1;Name=WP_005133915.1;Ontology_term=GO:0015074;end_range=7334,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611998.1;locus_tag=AC56_RS23550;partial=true;product=IS3 family transposase;protein_id=WP_005133915.1;transl_table=11
##sequence-region NZ_JJLS01000036.1 1 2047
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000036.1	RefSeq	region	1	2047	.	+	.	ID=NZ_JJLS01000036.1:1..2047;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000036.1	RefSeq	gene	1	783	.	+	.	ID=gene-AC56_RS23545;Name=AC56_RS23545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23545;old_locus_tag=AC56_5136;partial=true;start_range=.,1
NZ_JJLS01000036.1	Protein Homology	CDS	1	783	.	+	0	ID=cds-WP_050440194.1;Parent=gene-AC56_RS23545;Dbxref=GenBank:WP_050440194.1;Name=WP_050440194.1;Ontology_term=GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418796.1;locus_tag=AC56_RS23545;partial=true;product=YjjW family glycine radical enzyme activase;protein_id=WP_050440194.1;start_range=.,1;transl_table=11
NZ_JJLS01000036.1	RefSeq	gene	997	1779	.	-	.	ID=gene-AC56_RS23540;Name=AC56_RS23540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23540;old_locus_tag=AC56_5137
NZ_JJLS01000036.1	Protein Homology	CDS	997	1779	.	-	0	ID=cds-WP_000563058.1;Parent=gene-AC56_RS23540;Dbxref=GenBank:WP_000563058.1;Name=WP_000563058.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313363.2;locus_tag=AC56_RS23540;product=metal-dependent hydrolase;protein_id=WP_000563058.1;transl_table=11
NZ_JJLS01000036.1	RefSeq	gene	1776	2047	.	-	.	ID=gene-AC56_RS23535;Name=AC56_RS23535;end_range=2047,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23535;old_locus_tag=AC56_5138;partial=true
NZ_JJLS01000036.1	Protein Homology	CDS	1776	2047	.	-	2	ID=cds-WP_032282472.1;Parent=gene-AC56_RS23535;Dbxref=GenBank:WP_032282472.1;Name=WP_032282472.1;end_range=2047,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313362.1;locus_tag=AC56_RS23535;partial=true;product=DUF6363 domain-containing protein;protein_id=WP_032282472.1;transl_table=11
##sequence-region NZ_JJLS01000037.1 1 15017
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000037.1	RefSeq	region	1	15017	.	+	.	ID=NZ_JJLS01000037.1:1..15017;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000037.1	RefSeq	gene	238	492	.	+	.	ID=gene-AC56_RS23530;Name=AC56_RS23530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23530;old_locus_tag=AC56_5139
NZ_JJLS01000037.1	Protein Homology	CDS	238	492	.	+	0	ID=cds-WP_000083830.1;Parent=gene-AC56_RS23530;Dbxref=GenBank:WP_000083830.1;Name=WP_000083830.1;Ontology_term=GO:0006276;gbkey=CDS;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052674.1;locus_tag=AC56_RS23530;product=replication regulatory protein RepA;protein_id=WP_000083830.1;transl_table=11
NZ_JJLS01000037.1	RefSeq	gene	730	804	.	+	.	ID=gene-AC56_RS0124490;Name=tap;gbkey=Gene;gene=tap;gene_biotype=protein_coding;locus_tag=AC56_RS0124490
NZ_JJLS01000037.1	Protein Homology	CDS	730	804	.	+	0	ID=cds-WP_001365705.1;Parent=gene-AC56_RS0124490;Dbxref=GenBank:WP_001365705.1;Name=WP_001365705.1;Ontology_term=GO:0006276,GO:0031556;gbkey=CDS;gene=tap;go_process=plasmid maintenance|0006276||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001370046.1;locus_tag=AC56_RS0124490;product=RepA leader peptide Tap;protein_id=WP_001365705.1;transl_table=11
NZ_JJLS01000037.1	RefSeq	gene	797	1654	.	+	.	ID=gene-AC56_RS23525;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=AC56_RS23525;old_locus_tag=AC56_5140
NZ_JJLS01000037.1	Protein Homology	CDS	797	1654	.	+	0	ID=cds-WP_032277594.1;Parent=gene-AC56_RS23525;Dbxref=GenBank:WP_032277594.1;Name=WP_032277594.1;Ontology_term=GO:0006276;gbkey=CDS;gene=repA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052675.1;locus_tag=AC56_RS23525;product=incFII family plasmid replication initiator RepA;protein_id=WP_032277594.1;transl_table=11
NZ_JJLS01000037.1	RefSeq	gene	2570	2839	.	+	.	ID=gene-AC56_RS23520;Name=yacA;gbkey=Gene;gene=yacA;gene_biotype=protein_coding;locus_tag=AC56_RS23520;old_locus_tag=AC56_5141
NZ_JJLS01000037.1	Protein Homology	CDS	2570	2839	.	+	0	ID=cds-WP_000079939.1;Parent=gene-AC56_RS23520;Dbxref=GenBank:WP_000079939.1;Name=WP_000079939.1;gbkey=CDS;gene=yacA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015056448.1;locus_tag=AC56_RS23520;product=type II toxin-antitoxin system antitoxin YacA;protein_id=WP_000079939.1;transl_table=11
NZ_JJLS01000037.1	RefSeq	pseudogene	2839	2949	.	+	.	ID=gene-AC56_RS31765;Name=yacB;end_range=2949,.;gbkey=Gene;gene=yacB;gene_biotype=pseudogene;locus_tag=AC56_RS31765;old_locus_tag=AC56_5142;partial=true;pseudo=true
NZ_JJLS01000037.1	Protein Homology	CDS	2839	2949	.	+	0	ID=cds-AC56_RS31765;Parent=gene-AC56_RS31765;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2949,.;gbkey=CDS;gene=yacB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013009346.1;locus_tag=AC56_RS31765;partial=true;product=type II toxin-antitoxin system toxin YacB;pseudo=true;transl_table=11
NZ_JJLS01000037.1	RefSeq	gene	3048	3599	.	+	.	ID=gene-AC56_RS0124495;Name=AC56_RS0124495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0124495
NZ_JJLS01000037.1	GeneMarkS-2+	CDS	3048	3599	.	+	0	ID=cds-WP_248783573.1;Parent=gene-AC56_RS0124495;Dbxref=GenBank:WP_248783573.1;Name=WP_248783573.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS0124495;product=hypothetical protein;protein_id=WP_248783573.1;transl_table=11
NZ_JJLS01000037.1	RefSeq	gene	3634	4539	.	+	.	ID=gene-AC56_RS0124500;Name=AC56_RS0124500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0124500
NZ_JJLS01000037.1	Protein Homology	CDS	3634	4539	.	+	0	ID=cds-WP_001404365.1;Parent=gene-AC56_RS0124500;Dbxref=GenBank:WP_001404365.1;Name=WP_001404365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000219391.1;locus_tag=AC56_RS0124500;product=Mph(A) family macrolide 2'-phosphotransferase;protein_id=WP_001404365.1;transl_table=11
NZ_JJLS01000037.1	RefSeq	gene	4536	5774	.	+	.	ID=gene-AC56_RS23515;Name=mrx(A);gbkey=Gene;gene=mrx(A);gene_biotype=protein_coding;gene_synonym=mrx;locus_tag=AC56_RS23515;old_locus_tag=AC56_5145
NZ_JJLS01000037.1	Protein Homology	CDS	4536	5774	.	+	0	ID=cds-WP_000004159.1;Parent=gene-AC56_RS23515;Dbxref=GenBank:WP_000004159.1;Name=WP_000004159.1;gbkey=CDS;gene=mrx(A);inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004159.1;locus_tag=AC56_RS23515;product=macrolide resistance MFS transporter Mrx(A);protein_id=WP_000004159.1;transl_table=11
NZ_JJLS01000037.1	RefSeq	gene	5774	6358	.	+	.	ID=gene-AC56_RS23510;Name=mphR(A);gbkey=Gene;gene=mphR(A);gene_biotype=protein_coding;locus_tag=AC56_RS23510;old_locus_tag=AC56_5146
NZ_JJLS01000037.1	Protein Homology	CDS	5774	6358	.	+	0	ID=cds-WP_001137892.1;Parent=gene-AC56_RS23510;Dbxref=GenBank:WP_001137892.1;Name=WP_001137892.1;gbkey=CDS;gene=mphR(A);inference=COORDINATES: similar to AA sequence:RefSeq:WP_001137892.1;locus_tag=AC56_RS23510;product=macrolide-binding transcriptional repressor MphR(A);protein_id=WP_001137892.1;transl_table=11
NZ_JJLS01000037.1	RefSeq	gene	6851	7615	.	-	.	ID=gene-AC56_RS0124510;Name=AC56_RS0124510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0124510
NZ_JJLS01000037.1	Protein Homology	CDS	6851	7615	.	-	0	ID=cds-WP_001389365.1;Parent=gene-AC56_RS0124510;Dbxref=GenBank:WP_001389365.1;Name=WP_001389365.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001389365.1;locus_tag=AC56_RS0124510;product=IS6-like element IS6100 family transposase;protein_id=WP_001389365.1;transl_table=11
NZ_JJLS01000037.1	RefSeq	pseudogene	7674	7898	.	-	.	ID=gene-AC56_RS28190;Name=AC56_RS28190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS28190;partial=true;pseudo=true;start_range=.,7674
NZ_JJLS01000037.1	Protein Homology	CDS	7674	7898	.	-	0	ID=cds-AC56_RS28190;Parent=gene-AC56_RS28190;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611787.1;locus_tag=AC56_RS28190;partial=true;product=DUF4158 domain-containing protein;pseudo=true;start_range=.,7674;transl_table=11
NZ_JJLS01000037.1	RefSeq	gene	8056	8469	.	+	.	ID=gene-AC56_RS0124520;Name=AC56_RS0124520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0124520
NZ_JJLS01000037.1	Protein Homology	CDS	8056	8469	.	+	0	ID=cds-WP_252099956.1;Parent=gene-AC56_RS0124520;Dbxref=GenBank:WP_252099956.1;Name=WP_252099956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001722544.1;locus_tag=AC56_RS0124520;product=HTH domain-containing protein;protein_id=WP_252099956.1;transl_table=11
NZ_JJLS01000037.1	RefSeq	pseudogene	8581	8985	.	+	.	ID=gene-AC56_RS0124525;Name=AC56_RS0124525;end_range=8985,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0124525;partial=true;pseudo=true
NZ_JJLS01000037.1	Protein Homology	CDS	8581	8985	.	+	0	ID=cds-AC56_RS0124525;Parent=gene-AC56_RS0124525;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=8985,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_061586541.1;locus_tag=AC56_RS0124525;partial=true;product=IS91 family transposase;pseudo=true;transl_table=11
NZ_JJLS01000037.1	RefSeq	gene	9092	9928	.	-	.	ID=gene-AC56_RS23505;Name=AC56_RS23505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23505;old_locus_tag=AC56_5149
NZ_JJLS01000037.1	Protein Homology	CDS	9092	9928	.	-	0	ID=cds-WP_000480972.1;Parent=gene-AC56_RS23505;Dbxref=GenBank:WP_000480972.1;Name=WP_000480972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000480972.1;locus_tag=AC56_RS23505;product=aminoglycoside O-phosphotransferase APH(6)-Id;protein_id=WP_000480972.1;transl_table=11
NZ_JJLS01000037.1	RefSeq	gene	9928	10731	.	-	.	ID=gene-AC56_RS23500;Name=aph(3'')-Ib;gbkey=Gene;gene=aph(3'')-Ib;gene_biotype=protein_coding;locus_tag=AC56_RS23500;old_locus_tag=AC56_5150
NZ_JJLS01000037.1	Protein Homology	CDS	9928	10731	.	-	0	ID=cds-WP_001082319.1;Parent=gene-AC56_RS23500;Dbxref=GenBank:WP_001082319.1;Name=WP_001082319.1;gbkey=CDS;gene=aph(3'')-Ib;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010890156.1;locus_tag=AC56_RS23500;product=aminoglycoside O-phosphotransferase APH(3'')-Ib;protein_id=WP_001082319.1;transl_table=11
NZ_JJLS01000037.1	RefSeq	gene	10792	11607	.	-	.	ID=gene-AC56_RS23495;Name=sul2;gbkey=Gene;gene=sul2;gene_biotype=protein_coding;locus_tag=AC56_RS23495;old_locus_tag=AC56_5151
NZ_JJLS01000037.1	Protein Homology	CDS	10792	11607	.	-	0	ID=cds-WP_001043260.1;Parent=gene-AC56_RS23495;Dbxref=GenBank:WP_001043260.1;Name=WP_001043260.1;gbkey=CDS;gene=sul2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001043260.1;locus_tag=AC56_RS23495;product=sulfonamide-resistant dihydropteroate synthase Sul2;protein_id=WP_001043260.1;transl_table=11
NZ_JJLS01000037.1	RefSeq	gene	11944	12147	.	+	.	ID=gene-AC56_RS0124530;Name=AC56_RS0124530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0124530
NZ_JJLS01000037.1	GeneMarkS-2+	CDS	11944	12147	.	+	0	ID=cds-WP_000131876.1;Parent=gene-AC56_RS0124530;Dbxref=GenBank:WP_000131876.1;Name=WP_000131876.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS0124530;product=hypothetical protein;protein_id=WP_000131876.1;transl_table=11
NZ_JJLS01000037.1	RefSeq	gene	12138	12359	.	+	.	ID=gene-AC56_RS0124535;Name=AC56_RS0124535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0124535
NZ_JJLS01000037.1	GeneMarkS-2+	CDS	12138	12359	.	+	0	ID=cds-WP_032261177.1;Parent=gene-AC56_RS0124535;Dbxref=GenBank:WP_032261177.1;Name=WP_032261177.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS0124535;product=hypothetical protein;protein_id=WP_032261177.1;transl_table=11
NZ_JJLS01000037.1	RefSeq	gene	12594	12953	.	-	.	ID=gene-AC56_RS23490;Name=AC56_RS23490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23490;old_locus_tag=AC56_5153
NZ_JJLS01000037.1	Protein Homology	CDS	12594	12953	.	-	0	ID=cds-WP_000050069.1;Parent=gene-AC56_RS23490;Dbxref=GenBank:WP_000050069.1;Name=WP_000050069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000050069.1;locus_tag=AC56_RS23490;product=hypothetical protein;protein_id=WP_000050069.1;transl_table=11
NZ_JJLS01000037.1	RefSeq	gene	13110	13970	.	-	.	ID=gene-AC56_RS23485;Name=AC56_RS23485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23485;old_locus_tag=AC56_5154
NZ_JJLS01000037.1	Protein Homology	CDS	13110	13970	.	-	0	ID=cds-WP_000027057.1;Parent=gene-AC56_RS23485;Dbxref=GenBank:WP_000027057.1;Name=WP_000027057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032489893.1;locus_tag=AC56_RS23485;product=broad-spectrum class A beta-lactamase TEM-1;protein_id=WP_000027057.1;transl_table=11
NZ_JJLS01000037.1	RefSeq	gene	14261	14965	.	+	.	ID=gene-AC56_RS23480;Name=AC56_RS23480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23480;old_locus_tag=AC56_5156
NZ_JJLS01000037.1	Protein Homology	CDS	14261	14965	.	+	0	ID=cds-WP_001067855.1;Parent=gene-AC56_RS23480;Dbxref=GenBank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=AC56_RS23480;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11
##sequence-region NZ_JJLS01000038.1 1 2203
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000038.1	RefSeq	region	1	2203	.	+	.	ID=NZ_JJLS01000038.1:1..2203;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000038.1	RefSeq	gene	1	353	.	-	.	ID=gene-AC56_RS23475;Name=AC56_RS23475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23475;old_locus_tag=AC56_5157;partial=true;start_range=.,1
NZ_JJLS01000038.1	Protein Homology	CDS	1	353	.	-	0	ID=cds-WP_032282475.1;Parent=gene-AC56_RS23475;Dbxref=GenBank:WP_032282475.1;Name=WP_032282475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417964.1;locus_tag=AC56_RS23475;partial=true;product=hypothetical protein;protein_id=WP_032282475.1;start_range=.,1;transl_table=11
NZ_JJLS01000038.1	RefSeq	gene	509	1075	.	-	.	ID=gene-AC56_RS23470;Name=slp;gbkey=Gene;gene=slp;gene_biotype=protein_coding;locus_tag=AC56_RS23470;old_locus_tag=AC56_5158
NZ_JJLS01000038.1	Protein Homology	CDS	509	1075	.	-	0	ID=cds-WP_001057453.1;Parent=gene-AC56_RS23470;Dbxref=GenBank:WP_001057453.1;Name=WP_001057453.1;gbkey=CDS;gene=slp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312404.2;locus_tag=AC56_RS23470;product=outer membrane lipoprotein Slp;protein_id=WP_001057453.1;transl_table=11
NZ_JJLS01000038.1	RefSeq	pseudogene	1430	1874	.	-	.	ID=gene-AC56_RS23465;Name=AC56_RS23465;end_range=1874,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS23465;old_locus_tag=AC56_5159;partial=true;pseudo=true
NZ_JJLS01000038.1	Protein Homology	CDS	1430	1874	.	-	0	ID=cds-AC56_RS23465;Parent=gene-AC56_RS23465;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1874,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312403.1;locus_tag=AC56_RS23465;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_JJLS01000038.1	RefSeq	gene	1934	2203	.	+	.	ID=gene-AC56_RS23460;Name=AC56_RS23460;end_range=2203,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23460;old_locus_tag=AC56_5160;partial=true
NZ_JJLS01000038.1	Protein Homology	CDS	1934	2203	.	+	0	ID=cds-WP_032256280.1;Parent=gene-AC56_RS23460;Dbxref=GenBank:WP_032256280.1;Name=WP_032256280.1;end_range=2203,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS23460;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032256280.1;transl_table=11
##sequence-region NZ_JJLS01000039.1 1 2047
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000039.1	RefSeq	region	1	2047	.	+	.	ID=NZ_JJLS01000039.1:1..2047;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000039.1	RefSeq	gene	85	984	.	+	.	ID=gene-AC56_RS23455;Name=cynR;gbkey=Gene;gene=cynR;gene_biotype=protein_coding;locus_tag=AC56_RS23455;old_locus_tag=AC56_5161
NZ_JJLS01000039.1	Protein Homology	CDS	85	984	.	+	0	ID=cds-WP_000952503.1;Parent=gene-AC56_RS23455;Dbxref=GenBank:WP_000952503.1;Name=WP_000952503.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cynR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414872.3;locus_tag=AC56_RS23455;product=transcriptional regulator CynR;protein_id=WP_000952503.1;transl_table=11
NZ_JJLS01000039.1	RefSeq	gene	1121	2047	.	-	.	ID=gene-AC56_RS23450;Name=codA;end_range=2047,.;gbkey=Gene;gene=codA;gene_biotype=protein_coding;locus_tag=AC56_RS23450;old_locus_tag=AC56_5162;partial=true
NZ_JJLS01000039.1	Protein Homology	CDS	1121	2047	.	-	0	ID=cds-WP_032282476.1;Parent=gene-AC56_RS23450;Dbxref=GenBank:WP_032282476.1;Name=WP_032282476.1;end_range=2047,.;gbkey=CDS;gene=codA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414871.1;locus_tag=AC56_RS23450;partial=true;product=cytosine/isoguanine deaminase;protein_id=WP_032282476.1;transl_table=11
##sequence-region NZ_JJLS01000040.1 1 690
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000040.1	RefSeq	region	1	690	.	+	.	ID=NZ_JJLS01000040.1:1..690;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000040.1	RefSeq	pseudogene	1	68	.	-	.	ID=gene-AC56_RS32900;Name=AC56_RS32900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS32900;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000040.1	Protein Homology	CDS	1	68	.	-	0	ID=cds-AC56_RS32900;Parent=gene-AC56_RS32900;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052672.1;locus_tag=AC56_RS32900;partial=true;product=thermonuclease family protein;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000040.1	RefSeq	gene	352	690	.	+	.	ID=gene-AC56_RS23445;Name=AC56_RS23445;end_range=690,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23445;old_locus_tag=AC56_5164;partial=true
NZ_JJLS01000040.1	Protein Homology	CDS	352	690	.	+	0	ID=cds-WP_032256645.1;Parent=gene-AC56_RS23445;Dbxref=GenBank:WP_032256645.1;Name=WP_032256645.1;end_range=690,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS23445;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032256645.1;transl_table=11
##sequence-region NZ_JJLS01000041.1 1 18474
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000041.1	RefSeq	region	1	18474	.	+	.	ID=NZ_JJLS01000041.1:1..18474;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000041.1	RefSeq	pseudogene	1	415	.	-	.	ID=gene-AC56_RS23440;Name=AC56_RS23440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS23440;old_locus_tag=AC56_5165;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000041.1	Protein Homology	CDS	1	415	.	-	0	ID=cds-AC56_RS23440;Parent=gene-AC56_RS23440;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS23440;partial=true;product=IS4 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000041.1	RefSeq	gene	725	1114	.	+	.	ID=gene-AC56_RS0124540;Name=AC56_RS0124540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0124540
NZ_JJLS01000041.1	Protein Homology	CDS	725	1114	.	+	0	ID=cds-WP_000833767.1;Parent=gene-AC56_RS0124540;Dbxref=GenBank:WP_000833767.1;Name=WP_000833767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000833766.1;locus_tag=AC56_RS0124540;product=hypothetical protein;protein_id=WP_000833767.1;transl_table=11
NZ_JJLS01000041.1	RefSeq	gene	1111	2001	.	+	.	ID=gene-AC56_RS23435;Name=AC56_RS23435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23435;old_locus_tag=AC56_5167
NZ_JJLS01000041.1	Protein Homology	CDS	1111	2001	.	+	0	ID=cds-WP_032277627.1;Parent=gene-AC56_RS23435;Dbxref=GenBank:WP_032277627.1;Name=WP_032277627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000038335.1;locus_tag=AC56_RS23435;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_032277627.1;transl_table=11
NZ_JJLS01000041.1	RefSeq	gene	2001	2222	.	+	.	ID=gene-AC56_RS30830;Name=AC56_RS30830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS30830;old_locus_tag=AC56_5168
NZ_JJLS01000041.1	Protein Homology	CDS	2001	2222	.	+	0	ID=cds-WP_014358130.1;Parent=gene-AC56_RS30830;Dbxref=GenBank:WP_014358130.1;Name=WP_014358130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014358130.1;locus_tag=AC56_RS30830;product=hypothetical protein;protein_id=WP_014358130.1;transl_table=11
NZ_JJLS01000041.1	RefSeq	gene	2253	2504	.	-	.	ID=gene-AC56_RS23430;Name=AC56_RS23430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23430;old_locus_tag=AC56_5169
NZ_JJLS01000041.1	Protein Homology	CDS	2253	2504	.	-	0	ID=cds-WP_000148285.1;Parent=gene-AC56_RS23430;Dbxref=GenBank:WP_000148285.1;Name=WP_000148285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003980153.1;locus_tag=AC56_RS23430;product=helix-turn-helix transcriptional regulator;protein_id=WP_000148285.1;transl_table=11
NZ_JJLS01000041.1	RefSeq	pseudogene	3018	3865	.	+	.	ID=gene-AC56_RS0124545;Name=AC56_RS0124545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0124545;old_locus_tag=AC56_5171;pseudo=true
NZ_JJLS01000041.1	Protein Homology	CDS	3018	3865	.	+	0	ID=cds-AC56_RS0124545;Parent=gene-AC56_RS0124545;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001401764.1;locus_tag=AC56_RS0124545;product=DUF4942 domain-containing protein;pseudo=true;transl_table=11
NZ_JJLS01000041.1	RefSeq	gene	3951	4286	.	-	.	ID=gene-AC56_RS23425;Name=AC56_RS23425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23425;old_locus_tag=AC56_5172
NZ_JJLS01000041.1	Protein Homology	CDS	3951	4286	.	-	0	ID=cds-WP_032282477.1;Parent=gene-AC56_RS23425;Dbxref=GenBank:WP_032282477.1;Name=WP_032282477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000157082.1;locus_tag=AC56_RS23425;product=hypothetical protein;protein_id=WP_032282477.1;transl_table=11
NZ_JJLS01000041.1	RefSeq	gene	4518	4850	.	+	.	ID=gene-AC56_RS0124550;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=AC56_RS0124550
NZ_JJLS01000041.1	Protein Homology	CDS	4518	4850	.	+	0	ID=cds-WP_001291058.1;Parent=gene-AC56_RS0124550;Dbxref=GenBank:WP_001291058.1;Name=WP_001291058.1;Ontology_term=GO:0006355;gbkey=CDS;gene=mobA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291058.1;locus_tag=AC56_RS0124550;product=plasmid mobilization protein MobA;protein_id=WP_001291058.1;transl_table=11
NZ_JJLS01000041.1	RefSeq	gene	4862	7582	.	+	.	ID=gene-AC56_RS23420;Name=AC56_RS23420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23420;old_locus_tag=AC56_5174
NZ_JJLS01000041.1	Protein Homology	CDS	4862	7582	.	+	0	ID=cds-WP_032277628.1;Parent=gene-AC56_RS23420;Dbxref=GenBank:WP_032277628.1;Name=WP_032277628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000991381.1;locus_tag=AC56_RS23420;product=relaxase/mobilization nuclease domain-containing protein;protein_id=WP_032277628.1;transl_table=11
NZ_JJLS01000041.1	RefSeq	gene	7740	8135	.	+	.	ID=gene-AC56_RS23415;Name=AC56_RS23415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23415;old_locus_tag=AC56_5175
NZ_JJLS01000041.1	Protein Homology	CDS	7740	8135	.	+	0	ID=cds-WP_032250546.1;Parent=gene-AC56_RS23415;Dbxref=GenBank:WP_032250546.1;Name=WP_032250546.1;Ontology_term=GO:0043213,GO:0019534,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000538314.1;locus_tag=AC56_RS23415;product=cell envelope integrity TolA C-terminal domain-containing protein;protein_id=WP_032250546.1;transl_table=11
NZ_JJLS01000041.1	RefSeq	gene	8371	9942	.	-	.	ID=gene-AC56_RS23410;Name=AC56_RS23410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23410;old_locus_tag=AC56_5176
NZ_JJLS01000041.1	Protein Homology	CDS	8371	9942	.	-	0	ID=cds-WP_032277629.1;Parent=gene-AC56_RS23410;Dbxref=GenBank:WP_032277629.1;Name=WP_032277629.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904571.1;locus_tag=AC56_RS23410;product=IS66-like element ISCro1 family transposase;protein_id=WP_032277629.1;transl_table=11
NZ_JJLS01000041.1	RefSeq	gene	9962	10309	.	-	.	ID=gene-AC56_RS23405;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AC56_RS23405;old_locus_tag=AC56_5177
NZ_JJLS01000041.1	Protein Homology	CDS	9962	10309	.	-	0	ID=cds-WP_000624622.1;Parent=gene-AC56_RS23405;Dbxref=GenBank:WP_000624622.1;Name=WP_000624622.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858152.1;locus_tag=AC56_RS23405;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000624622.1;transl_table=11
NZ_JJLS01000041.1	RefSeq	pseudogene	10309	10985	.	-	.	ID=gene-AC56_RS30845;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=AC56_RS30845;pseudo=true
NZ_JJLS01000041.1	Protein Homology	CDS	10309	10985	.	-	0	ID=cds-AC56_RS30845;Parent=gene-AC56_RS30845;Note=frameshifted;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;gene=tnpA;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743492.1;locus_tag=AC56_RS30845;product=IS66-like element accessory protein TnpA;pseudo=true;transl_table=11
NZ_JJLS01000041.1	RefSeq	gene	11111	13963	.	-	.	ID=gene-AC56_RS33090;Name=trbC;gbkey=Gene;gene=trbC;gene_biotype=protein_coding;locus_tag=AC56_RS33090;old_locus_tag=AC56_5179
NZ_JJLS01000041.1	Protein Homology	CDS	11111	13963	.	-	0	ID=cds-WP_349237778.1;Parent=gene-AC56_RS33090;Dbxref=GenBank:WP_349237778.1;Name=WP_349237778.1;gbkey=CDS;gene=trbC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001306779.1;locus_tag=AC56_RS33090;product=F-type conjugative transfer protein TrbC;protein_id=WP_349237778.1;transl_table=11
NZ_JJLS01000041.1	RefSeq	gene	14301	14447	.	+	.	ID=gene-AC56_RS32550;Name=AC56_RS32550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS32550;old_locus_tag=AC56_5181
NZ_JJLS01000041.1	Protein Homology	CDS	14301	14447	.	+	0	ID=cds-WP_001346191.1;Parent=gene-AC56_RS32550;Dbxref=GenBank:WP_001346191.1;Name=WP_001346191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001346191.1;locus_tag=AC56_RS32550;product=hypothetical protein;protein_id=WP_001346191.1;transl_table=11
NZ_JJLS01000041.1	RefSeq	gene	14500	14595	.	+	.	ID=gene-AC56_RS33495;Name=dqlB;gbkey=Gene;gene=dqlB;gene_biotype=protein_coding;locus_tag=AC56_RS33495
NZ_JJLS01000041.1	Protein Homology	CDS	14500	14595	.	+	0	ID=cds-WP_001388983.1;Parent=gene-AC56_RS33495;Dbxref=GenBank:WP_001388983.1;Name=WP_001388983.1;gbkey=CDS;gene=dqlB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000609149.1;locus_tag=AC56_RS33495;product=DinQ-like type I toxin DqlB;protein_id=WP_001388983.1;transl_table=11
NZ_JJLS01000041.1	RefSeq	gene	14658	14834	.	-	.	ID=gene-AC56_RS32910;Name=AC56_RS32910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS32910;old_locus_tag=AC56_5182
NZ_JJLS01000041.1	Protein Homology	CDS	14658	14834	.	-	0	ID=cds-WP_001054907.1;Parent=gene-AC56_RS32910;Dbxref=GenBank:WP_001054907.1;Name=WP_001054907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001054900.1;locus_tag=AC56_RS32910;product=hypothetical protein;protein_id=WP_001054907.1;transl_table=11
NZ_JJLS01000041.1	RefSeq	gene	14984	15451	.	-	.	ID=gene-AC56_RS23390;Name=AC56_RS23390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23390;old_locus_tag=AC56_5183
NZ_JJLS01000041.1	Protein Homology	CDS	14984	15451	.	-	0	ID=cds-WP_032277630.1;Parent=gene-AC56_RS23390;Dbxref=GenBank:WP_032277630.1;Name=WP_032277630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001681654.1;locus_tag=AC56_RS23390;product=thermonuclease family protein;protein_id=WP_032277630.1;transl_table=11
NZ_JJLS01000041.1	RefSeq	gene	15616	16239	.	+	.	ID=gene-AC56_RS23385;Name=AC56_RS23385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23385;old_locus_tag=AC56_5184
NZ_JJLS01000041.1	Protein Homology	CDS	15616	16239	.	+	0	ID=cds-WP_001155252.1;Parent=gene-AC56_RS23385;Dbxref=GenBank:WP_001155252.1;Name=WP_001155252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001466373.1;locus_tag=AC56_RS23385;product=helix-turn-helix domain-containing protein;protein_id=WP_001155252.1;transl_table=11
NZ_JJLS01000041.1	RefSeq	gene	16437	16652	.	-	.	ID=gene-AC56_RS23380;Name=AC56_RS23380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23380;old_locus_tag=AC56_5185
NZ_JJLS01000041.1	Protein Homology	CDS	16437	16652	.	-	0	ID=cds-WP_032277631.1;Parent=gene-AC56_RS23380;Dbxref=GenBank:WP_032277631.1;Name=WP_032277631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001622039.1;locus_tag=AC56_RS23380;product=hypothetical protein;protein_id=WP_032277631.1;transl_table=11
NZ_JJLS01000041.1	RefSeq	pseudogene	16656	17013	.	-	.	ID=gene-AC56_RS23375;Name=AC56_RS23375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS23375;old_locus_tag=AC56_5186;pseudo=true
NZ_JJLS01000041.1	Protein Homology	CDS	16656	17013	.	-	0	ID=cds-AC56_RS23375;Parent=gene-AC56_RS23375;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001456887.1;locus_tag=AC56_RS23375;product=hypothetical protein;pseudo=true;transl_table=11
NZ_JJLS01000041.1	RefSeq	gene	17025	17216	.	-	.	ID=gene-AC56_RS23370;Name=AC56_RS23370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23370;old_locus_tag=AC56_5187
NZ_JJLS01000041.1	Protein Homology	CDS	17025	17216	.	-	0	ID=cds-WP_000751583.1;Parent=gene-AC56_RS23370;Dbxref=GenBank:WP_000751583.1;Name=WP_000751583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001322947.1;locus_tag=AC56_RS23370;product=hypothetical protein;protein_id=WP_000751583.1;transl_table=11
NZ_JJLS01000041.1	RefSeq	gene	17312	17554	.	-	.	ID=gene-AC56_RS23365;Name=AC56_RS23365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23365;old_locus_tag=AC56_5188
NZ_JJLS01000041.1	Protein Homology	CDS	17312	17554	.	-	0	ID=cds-WP_021542659.1;Parent=gene-AC56_RS23365;Dbxref=GenBank:WP_021542659.1;Name=WP_021542659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016244175.1;locus_tag=AC56_RS23365;product=hypothetical protein;protein_id=WP_021542659.1;transl_table=11
NZ_JJLS01000041.1	RefSeq	gene	17666	18046	.	+	.	ID=gene-AC56_RS23360;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AC56_RS23360;old_locus_tag=AC56_5189
NZ_JJLS01000041.1	Protein Homology	CDS	17666	18046	.	+	0	ID=cds-WP_001171554.1;Parent=gene-AC56_RS23360;Dbxref=GenBank:WP_001171554.1;Name=WP_001171554.1;gbkey=CDS;gene=tnpA;inference=COORDINATES: protein motif:HMM:NF047595.1;locus_tag=AC56_RS23360;product=IS66-like element accessory protein TnpA;protein_id=WP_001171554.1;transl_table=11
NZ_JJLS01000041.1	RefSeq	gene	18043	18390	.	+	.	ID=gene-AC56_RS23355;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AC56_RS23355;old_locus_tag=AC56_5190
NZ_JJLS01000041.1	Protein Homology	CDS	18043	18390	.	+	0	ID=cds-WP_000612591.1;Parent=gene-AC56_RS23355;Dbxref=GenBank:WP_000612591.1;Name=WP_000612591.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311895.1;locus_tag=AC56_RS23355;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000612591.1;transl_table=11
##sequence-region NZ_JJLS01000042.1 1 11872
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000042.1	RefSeq	region	1	11872	.	+	.	ID=NZ_JJLS01000042.1:1..11872;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000042.1	RefSeq	gene	1	961	.	+	.	ID=gene-AC56_RS23350;Name=AC56_RS23350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23350;old_locus_tag=AC56_5191;partial=true;start_range=.,1
NZ_JJLS01000042.1	Protein Homology	CDS	1	961	.	+	1	ID=cds-WP_032282478.1;Parent=gene-AC56_RS23350;Dbxref=GenBank:WP_032282478.1;Name=WP_032282478.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS23350;partial=true;product=IS4-like element IS421 family transposase;protein_id=WP_032282478.1;start_range=.,1;transl_table=11
NZ_JJLS01000042.1	RefSeq	gene	1224	2354	.	-	.	ID=gene-AC56_RS23345;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=AC56_RS23345;old_locus_tag=AC56_5192
NZ_JJLS01000042.1	Protein Homology	CDS	1224	2354	.	-	0	ID=cds-WP_032277801.1;Parent=gene-AC56_RS23345;Dbxref=GenBank:WP_032277801.1;Name=WP_032277801.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308042.1;locus_tag=AC56_RS23345;product=molecular chaperone DnaJ;protein_id=WP_032277801.1;transl_table=11
NZ_JJLS01000042.1	RefSeq	gene	2443	4359	.	-	.	ID=gene-AC56_RS23340;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=AC56_RS23340;old_locus_tag=AC56_5193
NZ_JJLS01000042.1	Protein Homology	CDS	2443	4359	.	-	0	ID=cds-WP_000516135.1;Parent=gene-AC56_RS23340;Dbxref=GenBank:WP_000516135.1;Name=WP_000516135.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=AC56_RS23340;product=molecular chaperone DnaK;protein_id=WP_000516135.1;transl_table=11
NZ_JJLS01000042.1	RefSeq	gene	4736	5140	.	+	.	ID=gene-AC56_RS23335;Name=AC56_RS23335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23335;old_locus_tag=AC56_5194
NZ_JJLS01000042.1	Protein Homology	CDS	4736	5140	.	+	0	ID=cds-WP_000843568.1;Parent=gene-AC56_RS23335;Dbxref=GenBank:WP_000843568.1;Name=WP_000843568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_705972.1;locus_tag=AC56_RS23335;product=DUF2541 family protein;protein_id=WP_000843568.1;transl_table=11
NZ_JJLS01000042.1	RefSeq	gene	5166	5879	.	+	.	ID=gene-AC56_RS0124585;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=protein_coding;locus_tag=AC56_RS0124585;old_locus_tag=AC56_5195
NZ_JJLS01000042.1	Protein Homology	CDS	5166	5879	.	+	0	ID=cds-WP_032277800.1;Parent=gene-AC56_RS0124585;Dbxref=GenBank:WP_032277800.1;Name=WP_032277800.1;gbkey=CDS;gene=msyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414552.1;locus_tag=AC56_RS0124585;product=acidic protein MsyB;protein_id=WP_032277800.1;transl_table=11
NZ_JJLS01000042.1	RefSeq	gene	6028	6594	.	+	.	ID=gene-AC56_RS23330;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;locus_tag=AC56_RS23330;old_locus_tag=AC56_5196
NZ_JJLS01000042.1	Protein Homology	CDS	6028	6594	.	+	0	ID=cds-WP_000528538.1;Parent=gene-AC56_RS23330;Dbxref=GenBank:WP_000528538.1;Name=WP_000528538.1;Ontology_term=GO:0016020;gbkey=CDS;gene=satP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308037.1;locus_tag=AC56_RS23330;product=acetate uptake transporter;protein_id=WP_000528538.1;transl_table=11
NZ_JJLS01000042.1	RefSeq	gene	6629	7216	.	-	.	ID=gene-AC56_RS23325;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=AC56_RS23325;old_locus_tag=AC56_5197
NZ_JJLS01000042.1	Protein Homology	CDS	6629	7216	.	-	0	ID=cds-WP_032277799.1;Parent=gene-AC56_RS23325;Dbxref=GenBank:WP_032277799.1;Name=WP_032277799.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308036.1;locus_tag=AC56_RS23325;product=molybdopterin adenylyltransferase;protein_id=WP_032277799.1;transl_table=11
NZ_JJLS01000042.1	RefSeq	gene	7331	8284	.	-	.	ID=gene-AC56_RS23320;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=AC56_RS23320;old_locus_tag=AC56_5198
NZ_JJLS01000042.1	Protein Homology	CDS	7331	8284	.	-	0	ID=cds-WP_000130189.1;Parent=gene-AC56_RS23320;Dbxref=GenBank:WP_000130189.1;Name=WP_000130189.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308035.1;locus_tag=AC56_RS23320;product=transaldolase;protein_id=WP_000130189.1;transl_table=11
NZ_JJLS01000042.1	RefSeq	gene	8563	9993	.	+	.	ID=gene-AC56_RS23315;Name=AC56_RS23315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23315;old_locus_tag=AC56_5199
NZ_JJLS01000042.1	Protein Homology	CDS	8563	9993	.	+	0	ID=cds-WP_016232447.1;Parent=gene-AC56_RS23315;Dbxref=GenBank:WP_016232447.1;Name=WP_016232447.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308034.1;locus_tag=AC56_RS23315;product=alanine/glycine:cation symporter family protein;protein_id=WP_016232447.1;transl_table=11
NZ_JJLS01000042.1	RefSeq	gene	10063	10839	.	+	.	ID=gene-AC56_RS23310;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=AC56_RS23310;old_locus_tag=AC56_5200
NZ_JJLS01000042.1	Protein Homology	CDS	10063	10839	.	+	0	ID=cds-WP_000906210.1;Parent=gene-AC56_RS23310;Dbxref=GenBank:WP_000906210.1;Name=WP_000906210.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308033.1;locus_tag=AC56_RS23310;product=peroxide stress protein YaaA;protein_id=WP_000906210.1;transl_table=11
NZ_JJLS01000042.1	RefSeq	gene	10992	11288	.	-	.	ID=gene-AC56_RS23305;Name=AC56_RS23305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23305;old_locus_tag=AC56_5201
NZ_JJLS01000042.1	Protein Homology	CDS	10992	11288	.	-	0	ID=cds-WP_032277798.1;Parent=gene-AC56_RS23305;Dbxref=GenBank:WP_032277798.1;Name=WP_032277798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308032.1;locus_tag=AC56_RS23305;product=DUF2502 domain-containing protein;protein_id=WP_032277798.1;transl_table=11
NZ_JJLS01000042.1	RefSeq	pseudogene	11445	11872	.	+	.	ID=gene-AC56_RS23300;Name=AC56_RS23300;end_range=11872,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS23300;old_locus_tag=AC56_5202;partial=true;pseudo=true
NZ_JJLS01000042.1	Protein Homology	CDS	11445	11872	.	+	0	ID=cds-AC56_RS23300;Parent=gene-AC56_RS23300;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=11872,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS23300;partial=true;product=IS5-like element ISKpn26 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000043.1 1 1767
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000043.1	RefSeq	region	1	1767	.	+	.	ID=NZ_JJLS01000043.1:1..1767;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000043.1	RefSeq	gene	1	313	.	+	.	ID=gene-AC56_RS0124590;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AC56_RS0124590;partial=true;start_range=.,1
NZ_JJLS01000043.1	Protein Homology	CDS	1	313	.	+	1	ID=cds-WP_032282479.1;Parent=gene-AC56_RS0124590;Dbxref=GenBank:WP_032282479.1;Name=WP_032282479.1;gbkey=CDS;gene=tnpA;inference=COORDINATES: protein motif:HMM:NF047595.1;locus_tag=AC56_RS0124590;partial=true;product=IS66-like element accessory protein TnpA;protein_id=WP_032282479.1;start_range=.,1;transl_table=11
NZ_JJLS01000043.1	RefSeq	gene	310	657	.	+	.	ID=gene-AC56_RS23295;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AC56_RS23295;old_locus_tag=AC56_5203
NZ_JJLS01000043.1	Protein Homology	CDS	310	657	.	+	0	ID=cds-WP_000612591.1-2;Parent=gene-AC56_RS23295;Dbxref=GenBank:WP_000612591.1;Name=WP_000612591.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311895.1;locus_tag=AC56_RS23295;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000612591.1;transl_table=11
NZ_JJLS01000043.1	RefSeq	gene	707	1767	.	+	.	ID=gene-AC56_RS23290;Name=AC56_RS23290;end_range=1767,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23290;old_locus_tag=AC56_5204;partial=true
NZ_JJLS01000043.1	Protein Homology	CDS	707	1767	.	+	0	ID=cds-WP_032282480.1;Parent=gene-AC56_RS23290;Dbxref=GenBank:WP_032282480.1;Name=WP_032282480.1;Ontology_term=GO:0006313,GO:0004803;end_range=1767,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000998048.1;locus_tag=AC56_RS23290;partial=true;product=IS66-like element ISEc8 family transposase;protein_id=WP_032282480.1;transl_table=11
##sequence-region NZ_JJLS01000044.1 1 2028
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000044.1	RefSeq	region	1	2028	.	+	.	ID=NZ_JJLS01000044.1:1..2028;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000044.1	RefSeq	pseudogene	1	398	.	+	.	ID=gene-AC56_RS23285;Name=AC56_RS23285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS23285;old_locus_tag=AC56_5205;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000044.1	Protein Homology	CDS	1	398	.	+	2	ID=cds-AC56_RS23285;Parent=gene-AC56_RS23285;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS23285;partial=true;product=IS5-like element IS903B family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000044.1	RefSeq	gene	458	1309	.	+	.	ID=gene-AC56_RS23280;Name=galF;gbkey=Gene;gene=galF;gene_biotype=protein_coding;locus_tag=AC56_RS23280;old_locus_tag=AC56_5206
NZ_JJLS01000044.1	Protein Homology	CDS	458	1309	.	+	0	ID=cds-WP_000551034.1;Parent=gene-AC56_RS23280;Dbxref=GenBank:WP_000551034.1;Name=WP_000551034.1;gbkey=CDS;gene=galF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001537247.1;locus_tag=AC56_RS23280;product=UTP--glucose-1-phosphate uridylyltransferase GalF;protein_id=WP_000551034.1;transl_table=11
NZ_JJLS01000044.1	RefSeq	gene	1627	2028	.	-	.	ID=gene-AC56_RS23275;Name=AC56_RS23275;end_range=2028,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23275;old_locus_tag=AC56_5207;partial=true
NZ_JJLS01000044.1	Protein Homology	CDS	1627	2028	.	-	0	ID=cds-WP_050440195.1;Parent=gene-AC56_RS23275;Dbxref=GenBank:WP_050440195.1;Name=WP_050440195.1;Ontology_term=GO:0004803;end_range=2028,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS23275;partial=true;product=IS1 family transposase;protein_id=WP_050440195.1;transl_table=11
##sequence-region NZ_JJLS01000045.1 1 5487
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000045.1	RefSeq	region	1	5487	.	+	.	ID=NZ_JJLS01000045.1:1..5487;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000045.1	RefSeq	pseudogene	1	789	.	-	.	ID=gene-AC56_RS30850;Name=AC56_RS30850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS30850;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000045.1	Protein Homology	CDS	1	789	.	-	0	ID=cds-AC56_RS30850;Parent=gene-AC56_RS30850;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611483.1;locus_tag=AC56_RS30850;partial=true;product=IS3-like element IS911 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000045.1	RefSeq	gene	877	1080	.	-	.	ID=gene-AC56_RS31790;Name=AC56_RS31790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS31790;old_locus_tag=AC56_5210
NZ_JJLS01000045.1	Protein Homology	CDS	877	1080	.	-	0	ID=cds-WP_000355616.1;Parent=gene-AC56_RS31790;Dbxref=GenBank:WP_000355616.1;Name=WP_000355616.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023128.6;locus_tag=AC56_RS31790;product=MFS transporter;protein_id=WP_000355616.1;transl_table=11
NZ_JJLS01000045.1	RefSeq	gene	1103	1360	.	+	.	ID=gene-AC56_RS23260;Name=AC56_RS23260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23260;old_locus_tag=AC56_5211
NZ_JJLS01000045.1	Protein Homology	CDS	1103	1360	.	+	0	ID=cds-WP_000254999.1;Parent=gene-AC56_RS23260;Dbxref=GenBank:WP_000254999.1;Name=WP_000254999.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028057.6;locus_tag=AC56_RS23260;product=surface-adhesin E family protein;protein_id=WP_000254999.1;transl_table=11
NZ_JJLS01000045.1	RefSeq	gene	1413	1538	.	-	.	ID=gene-AC56_RS30855;Name=ythA;gbkey=Gene;gene=ythA;gene_biotype=protein_coding;locus_tag=AC56_RS30855
NZ_JJLS01000045.1	Protein Homology	CDS	1413	1538	.	-	0	ID=cds-WP_000594405.1;Parent=gene-AC56_RS30855;Dbxref=GenBank:WP_000594405.1;Name=WP_000594405.1;gbkey=CDS;gene=ythA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001491548.1;locus_tag=AC56_RS30855;product=protein YthA;protein_id=WP_000594405.1;transl_table=11
NZ_JJLS01000045.1	RefSeq	gene	1581	2699	.	-	.	ID=gene-AC56_RS23255;Name=nanY;gbkey=Gene;gene=nanY;gene_biotype=protein_coding;gene_synonym=yjhC;locus_tag=AC56_RS23255;old_locus_tag=AC56_5212
NZ_JJLS01000045.1	Protein Homology	CDS	1581	2699	.	-	0	ID=cds-WP_000611568.1;Parent=gene-AC56_RS23255;Dbxref=GenBank:WP_000611568.1;Name=WP_000611568.1;gbkey=CDS;gene=nanY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418700.2;locus_tag=AC56_RS23255;product=2%2C7-anhydro-N-acetylneuraminate hydratase;protein_id=WP_000611568.1;transl_table=11
NZ_JJLS01000045.1	RefSeq	gene	2711	3928	.	-	.	ID=gene-AC56_RS23250;Name=nanX;gbkey=Gene;gene=nanX;gene_biotype=protein_coding;locus_tag=AC56_RS23250;old_locus_tag=AC56_5213
NZ_JJLS01000045.1	Protein Homology	CDS	2711	3928	.	-	0	ID=cds-WP_000179691.1;Parent=gene-AC56_RS23250;Dbxref=GenBank:WP_000179691.1;Name=WP_000179691.1;gbkey=CDS;gene=nanX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418699.4;locus_tag=AC56_RS23250;product=MFS transporter;protein_id=WP_000179691.1;transl_table=11
NZ_JJLS01000045.1	RefSeq	gene	4537	5487	.	+	.	ID=gene-AC56_RS23245;Name=AC56_RS23245;end_range=5487,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23245;old_locus_tag=AC56_5215;partial=true
NZ_JJLS01000045.1	Protein Homology	CDS	4537	5487	.	+	0	ID=cds-WP_024214594.1;Parent=gene-AC56_RS23245;Dbxref=GenBank:WP_024214594.1;Name=WP_024214594.1;Ontology_term=GO:0006313,GO:0004803;end_range=5487,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708590.1;locus_tag=AC56_RS23245;partial=true;product=IS4-like element IS4 family transposase;protein_id=WP_024214594.1;transl_table=11
##sequence-region NZ_JJLS01000046.1 1 8636
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000046.1	RefSeq	region	1	8636	.	+	.	ID=NZ_JJLS01000046.1:1..8636;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000046.1	RefSeq	pseudogene	1	357	.	-	.	ID=gene-AC56_RS23240;Name=AC56_RS23240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS23240;old_locus_tag=AC56_5216;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000046.1	Protein Homology	CDS	1	357	.	-	0	ID=cds-AC56_RS23240;Parent=gene-AC56_RS23240;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536648.1;locus_tag=AC56_RS23240;partial=true;product=baseplate J/gp47 family protein;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000046.1	RefSeq	gene	344	769	.	-	.	ID=gene-AC56_RS23235;Name=AC56_RS23235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23235;old_locus_tag=AC56_5217
NZ_JJLS01000046.1	Protein Homology	CDS	344	769	.	-	0	ID=cds-WP_000424732.1;Parent=gene-AC56_RS23235;Dbxref=GenBank:WP_000424732.1;Name=WP_000424732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000424727.1;locus_tag=AC56_RS23235;product=phage GP46 family protein;protein_id=WP_000424732.1;transl_table=11
NZ_JJLS01000046.1	RefSeq	gene	769	1317	.	-	.	ID=gene-AC56_RS23230;Name=AC56_RS23230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23230;old_locus_tag=AC56_5218
NZ_JJLS01000046.1	Protein Homology	CDS	769	1317	.	-	0	ID=cds-WP_001259074.1;Parent=gene-AC56_RS23230;Dbxref=GenBank:WP_001259074.1;Name=WP_001259074.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364403.1;locus_tag=AC56_RS23230;product=phage baseplate assembly protein V;protein_id=WP_001259074.1;transl_table=11
NZ_JJLS01000046.1	RefSeq	gene	1317	2396	.	-	.	ID=gene-AC56_RS23225;Name=AC56_RS23225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23225;old_locus_tag=AC56_5219
NZ_JJLS01000046.1	Protein Homology	CDS	1317	2396	.	-	0	ID=cds-WP_032277682.1;Parent=gene-AC56_RS23225;Dbxref=GenBank:WP_032277682.1;Name=WP_032277682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559673.1;locus_tag=AC56_RS23225;product=phage baseplate assembly protein;protein_id=WP_032277682.1;transl_table=11
NZ_JJLS01000046.1	RefSeq	gene	2393	3721	.	-	.	ID=gene-AC56_RS23220;Name=AC56_RS23220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23220;old_locus_tag=AC56_5220
NZ_JJLS01000046.1	Protein Homology	CDS	2393	3721	.	-	0	ID=cds-WP_032277683.1;Parent=gene-AC56_RS23220;Dbxref=GenBank:WP_032277683.1;Name=WP_032277683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134766.1;locus_tag=AC56_RS23220;product=DNA circularization protein;protein_id=WP_032277683.1;transl_table=11
NZ_JJLS01000046.1	RefSeq	pseudogene	3782	5618	.	-	.	ID=gene-AC56_RS0124600;Name=AC56_RS0124600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0124600;old_locus_tag=AC56_5221;pseudo=true
NZ_JJLS01000046.1	Protein Homology	CDS	3782	5618	.	-	0	ID=cds-AC56_RS0124600;Parent=gene-AC56_RS0124600;Note=frameshifted;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000807176.1;locus_tag=AC56_RS0124600;product=phage tail tape measure protein;pseudo=true;transl_table=11
NZ_JJLS01000046.1	RefSeq	gene	5760	6029	.	-	.	ID=gene-AC56_RS23215;Name=AC56_RS23215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23215;old_locus_tag=AC56_5223
NZ_JJLS01000046.1	Protein Homology	CDS	5760	6029	.	-	0	ID=cds-WP_000661051.1;Parent=gene-AC56_RS23215;Dbxref=GenBank:WP_000661051.1;Name=WP_000661051.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526907.1;locus_tag=AC56_RS23215;product=phage tail assembly protein;protein_id=WP_000661051.1;transl_table=11
NZ_JJLS01000046.1	RefSeq	gene	6029	6385	.	-	.	ID=gene-AC56_RS23210;Name=AC56_RS23210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23210;old_locus_tag=AC56_5224
NZ_JJLS01000046.1	Protein Homology	CDS	6029	6385	.	-	0	ID=cds-WP_000090998.1;Parent=gene-AC56_RS23210;Dbxref=GenBank:WP_000090998.1;Name=WP_000090998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707866.1;locus_tag=AC56_RS23210;product=phage tail tube protein;protein_id=WP_000090998.1;transl_table=11
NZ_JJLS01000046.1	RefSeq	gene	6385	7881	.	-	.	ID=gene-AC56_RS23205;Name=AC56_RS23205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23205;old_locus_tag=AC56_5225
NZ_JJLS01000046.1	Protein Homology	CDS	6385	7881	.	-	0	ID=cds-WP_032282481.1;Parent=gene-AC56_RS23205;Dbxref=GenBank:WP_032282481.1;Name=WP_032282481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707867.1;locus_tag=AC56_RS23205;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=WP_032282481.1;transl_table=11
NZ_JJLS01000046.1	RefSeq	gene	7865	8035	.	-	.	ID=gene-AC56_RS23200;Name=AC56_RS23200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23200;old_locus_tag=AC56_5226
NZ_JJLS01000046.1	Protein Homology	CDS	7865	8035	.	-	0	ID=cds-WP_000497753.1;Parent=gene-AC56_RS23200;Dbxref=GenBank:WP_000497753.1;Name=WP_000497753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000497758.1;locus_tag=AC56_RS23200;product=DUF2635 domain-containing protein;protein_id=WP_000497753.1;transl_table=11
NZ_JJLS01000046.1	RefSeq	gene	8044	8604	.	-	.	ID=gene-AC56_RS23195;Name=AC56_RS23195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23195;old_locus_tag=AC56_5227
NZ_JJLS01000046.1	Protein Homology	CDS	8044	8604	.	-	0	ID=cds-WP_000779292.1;Parent=gene-AC56_RS23195;Dbxref=GenBank:WP_000779292.1;Name=WP_000779292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016244984.1;locus_tag=AC56_RS23195;product=phage tail terminator protein;protein_id=WP_000779292.1;transl_table=11
##sequence-region NZ_JJLS01000047.1 1 10806
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000047.1	RefSeq	region	1	10806	.	+	.	ID=NZ_JJLS01000047.1:1..10806;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000047.1	RefSeq	gene	1	860	.	+	.	ID=gene-AC56_RS23190;Name=AC56_RS23190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23190;old_locus_tag=AC56_5228;partial=true;start_range=.,1
NZ_JJLS01000047.1	Protein Homology	CDS	1	860	.	+	2	ID=cds-WP_032282484.1;Parent=gene-AC56_RS23190;Dbxref=GenBank:WP_032282484.1;Name=WP_032282484.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AC56_RS23190;partial=true;product=IS3 family transposase;protein_id=WP_032282484.1;start_range=.,1;transl_table=11
NZ_JJLS01000047.1	RefSeq	pseudogene	900	2036	.	+	.	ID=gene-AC56_RS23185;Name=AC56_RS23185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS23185;old_locus_tag=AC56_5229;partial=true;pseudo=true;start_range=.,900
NZ_JJLS01000047.1	Protein Homology	CDS	900	2036	.	+	0	ID=cds-AC56_RS23185;Parent=gene-AC56_RS23185;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010344508.1;locus_tag=AC56_RS23185;partial=true;product=autotransporter outer membrane beta-barrel domain-containing protein;pseudo=true;start_range=.,900;transl_table=11
NZ_JJLS01000047.1	RefSeq	pseudogene	2211	2416	.	-	.	ID=gene-AC56_RS30860;Name=AC56_RS30860;end_range=2416,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS30860;old_locus_tag=AC56_5230;partial=true;pseudo=true
NZ_JJLS01000047.1	Protein Homology	CDS	2211	2416	.	-	0	ID=cds-AC56_RS30860;Parent=gene-AC56_RS30860;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2416,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869530.1;locus_tag=AC56_RS30860;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_JJLS01000047.1	RefSeq	pseudogene	2415	2555	.	+	.	ID=gene-AC56_RS33095;Name=AC56_RS33095;end_range=2555,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33095;partial=true;pseudo=true;start_range=.,2415
NZ_JJLS01000047.1	Protein Homology	CDS	2415	2555	.	+	0	ID=cds-AC56_RS33095;Parent=gene-AC56_RS33095;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2555,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007752107.1;locus_tag=AC56_RS33095;partial=true;product=alkaline phosphatase;pseudo=true;start_range=.,2415;transl_table=11
NZ_JJLS01000047.1	RefSeq	gene	2896	3183	.	-	.	ID=gene-AC56_RS23170;Name=AC56_RS23170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23170;old_locus_tag=AC56_5233
NZ_JJLS01000047.1	Protein Homology	CDS	2896	3183	.	-	0	ID=cds-WP_032277764.1;Parent=gene-AC56_RS23170;Dbxref=GenBank:WP_032277764.1;Name=WP_032277764.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020317119.1;locus_tag=AC56_RS23170;product=type II toxin-antitoxin system RelE family toxin;protein_id=WP_032277764.1;transl_table=11
NZ_JJLS01000047.1	RefSeq	gene	3180	3431	.	-	.	ID=gene-AC56_RS23165;Name=AC56_RS23165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23165;old_locus_tag=AC56_5234
NZ_JJLS01000047.1	Protein Homology	CDS	3180	3431	.	-	0	ID=cds-WP_032206515.1;Parent=gene-AC56_RS23165;Dbxref=GenBank:WP_032206515.1;Name=WP_032206515.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001595120.1;locus_tag=AC56_RS23165;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_032206515.1;transl_table=11
NZ_JJLS01000047.1	RefSeq	pseudogene	4092	7942	.	+	.	ID=gene-AC56_RS0124605;Name=AC56_RS0124605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0124605;pseudo=true
NZ_JJLS01000047.1	Protein Homology	CDS	4092	7942	.	+	0	ID=cds-AC56_RS0124605;Parent=gene-AC56_RS0124605;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001640257.1;locus_tag=AC56_RS0124605;product=helicase-related protein;pseudo=true;transl_table=11
NZ_JJLS01000047.1	RefSeq	gene	7976	8416	.	+	.	ID=gene-AC56_RS23160;Name=AC56_RS23160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23160;old_locus_tag=AC56_5238
NZ_JJLS01000047.1	Protein Homology	CDS	7976	8416	.	+	0	ID=cds-WP_000224043.1;Parent=gene-AC56_RS23160;Dbxref=GenBank:WP_000224043.1;Name=WP_000224043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015974230.1;locus_tag=AC56_RS23160;product=hypothetical protein;protein_id=WP_000224043.1;transl_table=11
NZ_JJLS01000047.1	RefSeq	pseudogene	8701	9422	.	-	.	ID=gene-AC56_RS0124610;Name=AC56_RS0124610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0124610;pseudo=true
NZ_JJLS01000047.1	Protein Homology	CDS	8701	9422	.	-	0	ID=cds-AC56_RS0124610;Parent=gene-AC56_RS0124610;Note=frameshifted;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016236881.1;locus_tag=AC56_RS0124610;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11
NZ_JJLS01000047.1	RefSeq	gene	9896	10345	.	+	.	ID=gene-AC56_RS28255;Name=AC56_RS28255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS28255
NZ_JJLS01000047.1	Protein Homology	CDS	9896	10345	.	+	0	ID=cds-WP_071998987.1;Parent=gene-AC56_RS28255;Dbxref=GenBank:WP_071998987.1;Name=WP_071998987.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012772.6;locus_tag=AC56_RS28255;product=EAL domain-containing protein;protein_id=WP_071998987.1;transl_table=11
NZ_JJLS01000047.1	RefSeq	gene	10508	10806	.	-	.	ID=gene-AC56_RS23145;Name=AC56_RS23145;end_range=10806,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23145;old_locus_tag=AC56_5241;partial=true
NZ_JJLS01000047.1	Protein Homology	CDS	10508	10806	.	-	2	ID=cds-WP_032282485.1;Parent=gene-AC56_RS23145;Dbxref=GenBank:WP_032282485.1;Name=WP_032282485.1;end_range=10806,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS23145;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032282485.1;transl_table=11
##sequence-region NZ_JJLS01000048.1 1 723
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000048.1	RefSeq	region	1	723	.	+	.	ID=NZ_JJLS01000048.1:1..723;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000048.1	RefSeq	gene	1	642	.	+	.	ID=gene-AC56_RS23140;Name=AC56_RS23140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23140;old_locus_tag=AC56_5242;partial=true;start_range=.,1
NZ_JJLS01000048.1	Protein Homology	CDS	1	642	.	+	0	ID=cds-WP_000518531.1;Parent=gene-AC56_RS23140;Dbxref=GenBank:WP_000518531.1;Name=WP_000518531.1;Ontology_term=GO:0009267,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415130.1;locus_tag=AC56_RS23140;partial=true;product=carbon starvation CstA family protein;protein_id=WP_000518531.1;start_range=.,1;transl_table=11
##sequence-region NZ_JJLS01000049.1 1 763
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000049.1	RefSeq	region	1	763	.	+	.	ID=NZ_JJLS01000049.1:1..763;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000049.1	RefSeq	gene	1	265	.	+	.	ID=gene-AC56_RS23135;Name=AC56_RS23135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23135;old_locus_tag=AC56_5243;partial=true;start_range=.,1
NZ_JJLS01000049.1	Protein Homology	CDS	1	265	.	+	1	ID=cds-WP_032282487.1;Parent=gene-AC56_RS23135;Dbxref=GenBank:WP_032282487.1;Name=WP_032282487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS23135;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032282487.1;start_range=.,1;transl_table=11
NZ_JJLS01000049.1	RefSeq	gene	247	456	.	+	.	ID=gene-AC56_RS33650;Name=AC56_RS33650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33650
NZ_JJLS01000049.1	Protein Homology	CDS	247	456	.	+	0	ID=cds-WP_349251415.1;Parent=gene-AC56_RS33650;Dbxref=GenBank:WP_349251415.1;Name=WP_349251415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001340235.1;locus_tag=AC56_RS33650;product=hypothetical protein;protein_id=WP_349251415.1;transl_table=11
NZ_JJLS01000049.1	RefSeq	gene	458	763	.	+	.	ID=gene-AC56_RS0124620;Name=AC56_RS0124620;end_range=763,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0124620;old_locus_tag=AC56_5245;partial=true
NZ_JJLS01000049.1	Protein Homology	CDS	458	763	.	+	0	ID=cds-WP_204361853.1;Parent=gene-AC56_RS0124620;Dbxref=GenBank:WP_204361853.1;Name=WP_204361853.1;end_range=763,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS0124620;partial=true;product=transposase;protein_id=WP_204361853.1;transl_table=11
##sequence-region NZ_JJLS01000050.1 1 4785
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000050.1	RefSeq	region	1	4785	.	+	.	ID=NZ_JJLS01000050.1:1..4785;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000050.1	RefSeq	gene	1	1095	.	+	.	ID=gene-AC56_RS23130;Name=AC56_RS23130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23130;old_locus_tag=AC56_5246;partial=true;start_range=.,1
NZ_JJLS01000050.1	Protein Homology	CDS	1	1095	.	+	0	ID=cds-WP_000225075.1;Parent=gene-AC56_RS23130;Dbxref=GenBank:WP_000225075.1;Name=WP_000225075.1;Ontology_term=GO:0006540,GO:0004351,GO:0030170;gbkey=CDS;go_function=glutamate decarboxylase activity|0004351||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyrate shunt|0006540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310125.1;locus_tag=AC56_RS23130;partial=true;product=glutamate decarboxylase;protein_id=WP_000225075.1;start_range=.,1;transl_table=11
NZ_JJLS01000050.1	RefSeq	gene	1251	2786	.	+	.	ID=gene-AC56_RS23125;Name=gadC;gbkey=Gene;gene=gadC;gene_biotype=protein_coding;locus_tag=AC56_RS23125;old_locus_tag=AC56_5247
NZ_JJLS01000050.1	Protein Homology	CDS	1251	2786	.	+	0	ID=cds-WP_000246019.1;Parent=gene-AC56_RS23125;Dbxref=GenBank:WP_000246019.1;Name=WP_000246019.1;gbkey=CDS;gene=gadC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416009.1;locus_tag=AC56_RS23125;product=acid resistance gamma-aminobutyrate antiporter GadC;protein_id=WP_000246019.1;transl_table=11
NZ_JJLS01000050.1	RefSeq	gene	2917	4236	.	+	.	ID=gene-AC56_RS23120;Name=AC56_RS23120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23120;old_locus_tag=AC56_5248
NZ_JJLS01000050.1	Protein Homology	CDS	2917	4236	.	+	0	ID=cds-WP_077746224.1;Parent=gene-AC56_RS23120;Dbxref=GenBank:WP_077746224.1;Name=WP_077746224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310123.1;locus_tag=AC56_RS23120;product=family 10 glycosylhydrolase;protein_id=WP_077746224.1;transl_table=11
NZ_JJLS01000050.1	RefSeq	gene	4427	4785	.	+	.	ID=gene-AC56_RS23115;Name=AC56_RS23115;end_range=4785,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23115;old_locus_tag=AC56_5249;partial=true
NZ_JJLS01000050.1	Protein Homology	CDS	4427	4785	.	+	0	ID=cds-WP_032282489.1;Parent=gene-AC56_RS23115;Dbxref=GenBank:WP_032282489.1;Name=WP_032282489.1;end_range=4785,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS23115;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032282489.1;transl_table=11
##sequence-region NZ_JJLS01000051.1 1 3908
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000051.1	RefSeq	region	1	3908	.	+	.	ID=NZ_JJLS01000051.1:1..3908;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000051.1	RefSeq	gene	1	654	.	+	.	ID=gene-AC56_RS23110;Name=AC56_RS23110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23110;old_locus_tag=AC56_5250;partial=true;start_range=.,1
NZ_JJLS01000051.1	Protein Homology	CDS	1	654	.	+	0	ID=cds-WP_032282490.1;Parent=gene-AC56_RS23110;Dbxref=GenBank:WP_032282490.1;Name=WP_032282490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000998048.1;locus_tag=AC56_RS23110;partial=true;product=IS66 family transposase;protein_id=WP_032282490.1;start_range=.,1;transl_table=11
NZ_JJLS01000051.1	RefSeq	gene	893	2251	.	-	.	ID=gene-AC56_RS23105;Name=AC56_RS23105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23105;old_locus_tag=AC56_5251
NZ_JJLS01000051.1	Protein Homology	CDS	893	2251	.	-	0	ID=cds-WP_032277746.1;Parent=gene-AC56_RS23105;Dbxref=GenBank:WP_032277746.1;Name=WP_032277746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000823236.1;locus_tag=AC56_RS23105;product=esterase-like activity of phytase family protein;protein_id=WP_032277746.1;transl_table=11
NZ_JJLS01000051.1	RefSeq	pseudogene	2533	2664	.	+	.	ID=gene-AC56_RS30870;Name=AC56_RS30870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS30870;partial=true;pseudo=true;start_range=.,2533
NZ_JJLS01000051.1	Protein Homology	CDS	2533	2664	.	+	0	ID=cds-AC56_RS30870;Parent=gene-AC56_RS30870;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AC56_RS30870;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,2533;transl_table=11
NZ_JJLS01000051.1	RefSeq	pseudogene	2747	2877	.	+	.	ID=gene-AC56_RS33825;Name=AC56_RS33825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33825;old_locus_tag=AC56_5252;partial=true;pseudo=true;start_range=.,2747
NZ_JJLS01000051.1	Protein Homology	CDS	2747	2877	.	+	0	ID=cds-AC56_RS33825;Parent=gene-AC56_RS33825;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004856299.1;locus_tag=AC56_RS33825;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,2747;transl_table=11
NZ_JJLS01000051.1	RefSeq	gene	3002	3295	.	-	.	ID=gene-AC56_RS23100;Name=AC56_RS23100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23100;old_locus_tag=AC56_5253
NZ_JJLS01000051.1	Protein Homology	CDS	3002	3295	.	-	0	ID=cds-WP_000239862.1;Parent=gene-AC56_RS23100;Dbxref=GenBank:WP_000239862.1;Name=WP_000239862.1;Ontology_term=GO:0071468;gbkey=CDS;go_process=cellular response to acidic pH|0071468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016230781.1;locus_tag=AC56_RS23100;product=biofilm development regulator YmgB/AriR family protein;protein_id=WP_000239862.1;transl_table=11
NZ_JJLS01000051.1	RefSeq	pseudogene	3598	3696	.	-	.	ID=gene-AC56_RS28270;Name=AC56_RS28270;end_range=3696,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS28270;partial=true;pseudo=true
NZ_JJLS01000051.1	Protein Homology	CDS	3598	3696	.	-	0	ID=cds-AC56_RS28270;Parent=gene-AC56_RS28270;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=3696,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612091.1;locus_tag=AC56_RS28270;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11
NZ_JJLS01000051.1	RefSeq	pseudogene	3696	3900	.	-	.	ID=gene-AC56_RS33100;Name=AC56_RS33100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33100;partial=true;pseudo=true;start_range=.,3696
NZ_JJLS01000051.1	Protein Homology	CDS	3696	3900	.	-	0	ID=cds-AC56_RS33100;Parent=gene-AC56_RS33100;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AC56_RS33100;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3696;transl_table=11
##sequence-region NZ_JJLS01000052.1 1 5700
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000052.1	RefSeq	region	1	5700	.	+	.	ID=NZ_JJLS01000052.1:1..5700;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000052.1	RefSeq	pseudogene	1	573	.	-	.	ID=gene-AC56_RS31800;Name=AC56_RS31800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS31800;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000052.1	Protein Homology	CDS	1	573	.	-	0	ID=cds-AC56_RS31800;Parent=gene-AC56_RS31800;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AC56_RS31800;partial=true;product=transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000052.1	cmsearch	sequence_feature	176	292	.	-	.	ID=id-AC56_RS31800;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS31800;pseudo=true
NZ_JJLS01000052.1	RefSeq	gene	660	1058	.	+	.	ID=gene-AC56_RS0124630;Name=AC56_RS0124630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0124630
NZ_JJLS01000052.1	Protein Homology	CDS	660	1058	.	+	0	ID=cds-WP_282915994.1;Parent=gene-AC56_RS0124630;Dbxref=GenBank:WP_282915994.1;Name=WP_282915994.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016926.6;locus_tag=AC56_RS0124630;product=MltR family transcriptional regulator;protein_id=WP_282915994.1;transl_table=11
NZ_JJLS01000052.1	RefSeq	gene	1305	2567	.	+	.	ID=gene-AC56_RS23085;Name=AC56_RS23085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23085;old_locus_tag=AC56_5256
NZ_JJLS01000052.1	Protein Homology	CDS	1305	2567	.	+	0	ID=cds-WP_023317697.1;Parent=gene-AC56_RS23085;Dbxref=GenBank:WP_023317697.1;Name=WP_023317697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395316.1;locus_tag=AC56_RS23085;product=hypothetical protein;protein_id=WP_023317697.1;transl_table=11
NZ_JJLS01000052.1	RefSeq	gene	3223	3480	.	-	.	ID=gene-AC56_RS0124635;Name=AC56_RS0124635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0124635;old_locus_tag=AC56_5257
NZ_JJLS01000052.1	Protein Homology	CDS	3223	3480	.	-	0	ID=cds-WP_001748229.1;Parent=gene-AC56_RS0124635;Dbxref=GenBank:WP_001748229.1;Name=WP_001748229.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965745.1;locus_tag=AC56_RS0124635;product=HigA family addiction module antitoxin;protein_id=WP_001748229.1;transl_table=11
NZ_JJLS01000052.1	RefSeq	gene	4176	4469	.	+	.	ID=gene-AC56_RS28285;Name=AC56_RS28285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS28285
NZ_JJLS01000052.1	Protein Homology	CDS	4176	4469	.	+	0	ID=cds-WP_248790141.1;Parent=gene-AC56_RS28285;Dbxref=GenBank:WP_248790141.1;Name=WP_248790141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020244701.1;locus_tag=AC56_RS28285;product=hypothetical protein;protein_id=WP_248790141.1;transl_table=11
NZ_JJLS01000052.1	RefSeq	gene	4752	5105	.	+	.	ID=gene-AC56_RS23080;Name=traJ;gbkey=Gene;gene=traJ;gene_biotype=protein_coding;locus_tag=AC56_RS23080;old_locus_tag=AC56_5258
NZ_JJLS01000052.1	Protein Homology	CDS	4752	5105	.	+	0	ID=cds-WP_001395314.1;Parent=gene-AC56_RS23080;Dbxref=GenBank:WP_001395314.1;Name=WP_001395314.1;gbkey=CDS;gene=traJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575471.1;locus_tag=AC56_RS23080;product=conjugal transfer transcriptional regulator TraJ;protein_id=WP_001395314.1;transl_table=11
NZ_JJLS01000052.1	RefSeq	pseudogene	5187	5300	.	+	.	ID=gene-AC56_RS33105;Name=AC56_RS33105;end_range=5300,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33105;partial=true;pseudo=true
NZ_JJLS01000052.1	Protein Homology	CDS	5187	5300	.	+	0	ID=cds-AC56_RS33105;Parent=gene-AC56_RS33105;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=5300,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724243.1;locus_tag=AC56_RS33105;partial=true;product=P-type conjugative transfer protein TrbJ;pseudo=true;transl_table=11
NZ_JJLS01000052.1	RefSeq	gene	5358	5700	.	-	.	ID=gene-AC56_RS23075;Name=AC56_RS23075;end_range=5700,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23075;old_locus_tag=AC56_5259;partial=true
NZ_JJLS01000052.1	Protein Homology	CDS	5358	5700	.	-	1	ID=cds-WP_032282491.1;Parent=gene-AC56_RS23075;Dbxref=GenBank:WP_032282491.1;Name=WP_032282491.1;end_range=5700,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS23075;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032282491.1;transl_table=11
##sequence-region NZ_JJLS01000053.1 1 7310
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000053.1	RefSeq	region	1	7310	.	+	.	ID=NZ_JJLS01000053.1:1..7310;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000053.1	RefSeq	gene	1	377	.	-	.	ID=gene-AC56_RS23070;Name=AC56_RS23070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23070;old_locus_tag=AC56_5260;partial=true;start_range=.,1
NZ_JJLS01000053.1	Protein Homology	CDS	1	377	.	-	0	ID=cds-WP_032282494.1;Parent=gene-AC56_RS23070;Dbxref=GenBank:WP_032282494.1;Name=WP_032282494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS23070;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032282494.1;start_range=.,1;transl_table=11
NZ_JJLS01000053.1	RefSeq	gene	963	1184	.	+	.	ID=gene-AC56_RS23065;Name=AC56_RS23065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23065;old_locus_tag=AC56_5261
NZ_JJLS01000053.1	Protein Homology	CDS	963	1184	.	+	0	ID=cds-WP_000542385.1;Parent=gene-AC56_RS23065;Dbxref=GenBank:WP_000542385.1;Name=WP_000542385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001697576.1;locus_tag=AC56_RS23065;product=hypothetical protein;protein_id=WP_000542385.1;transl_table=11
NZ_JJLS01000053.1	RefSeq	gene	1192	2223	.	+	.	ID=gene-AC56_RS23060;Name=AC56_RS23060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23060;old_locus_tag=AC56_5262
NZ_JJLS01000053.1	Protein Homology	CDS	1192	2223	.	+	0	ID=cds-WP_000067530.1;Parent=gene-AC56_RS23060;Dbxref=GenBank:WP_000067530.1;Name=WP_000067530.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001569361.1;locus_tag=AC56_RS23060;product=site-specific integrase;protein_id=WP_000067530.1;transl_table=11
NZ_JJLS01000053.1	RefSeq	gene	2274	2585	.	+	.	ID=gene-AC56_RS0124640;Name=AC56_RS0124640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0124640
NZ_JJLS01000053.1	Protein Homology	CDS	2274	2585	.	+	0	ID=cds-WP_032277771.1;Parent=gene-AC56_RS0124640;Dbxref=GenBank:WP_032277771.1;Name=WP_032277771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001749391.1;locus_tag=AC56_RS0124640;product=hypothetical protein;protein_id=WP_032277771.1;transl_table=11
NZ_JJLS01000053.1	RefSeq	pseudogene	2784	2885	.	-	.	ID=gene-AC56_RS33830;Name=AC56_RS33830;end_range=2885,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33830;partial=true;pseudo=true;start_range=.,2784
NZ_JJLS01000053.1	Protein Homology	CDS	2784	2885	.	-	0	ID=cds-AC56_RS33830;Parent=gene-AC56_RS33830;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2885,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611683.1;locus_tag=AC56_RS33830;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2784;transl_table=11
NZ_JJLS01000053.1	RefSeq	pseudogene	2934	3573	.	+	.	ID=gene-AC56_RS31815;Name=AC56_RS31815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS31815;pseudo=true
NZ_JJLS01000053.1	Protein Homology	CDS	2934	3573	.	+	0	ID=cds-AC56_RS31815;Parent=gene-AC56_RS31815;Note=frameshifted%3B internal stop;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001722340.1;locus_tag=AC56_RS31815;product=recombinase family protein;pseudo=true;transl_table=11
NZ_JJLS01000053.1	RefSeq	gene	3680	4063	.	-	.	ID=gene-AC56_RS23055;Name=AC56_RS23055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23055;old_locus_tag=AC56_5267
NZ_JJLS01000053.1	Protein Homology	CDS	3680	4063	.	-	0	ID=cds-WP_198290423.1;Parent=gene-AC56_RS23055;Dbxref=GenBank:WP_198290423.1;Name=WP_198290423.1;Ontology_term=GO:0030638;gbkey=CDS;go_process=polyketide metabolic process|0030638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541954.1;locus_tag=AC56_RS23055;product=ester cyclase;protein_id=WP_198290423.1;transl_table=11
NZ_JJLS01000053.1	RefSeq	gene	4090	5079	.	-	.	ID=gene-AC56_RS23050;Name=AC56_RS23050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23050;old_locus_tag=AC56_5268
NZ_JJLS01000053.1	Protein Homology	CDS	4090	5079	.	-	0	ID=cds-WP_000104482.1;Parent=gene-AC56_RS23050;Dbxref=GenBank:WP_000104482.1;Name=WP_000104482.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001646431.1;locus_tag=AC56_RS23050;product=GlxA family transcriptional regulator;protein_id=WP_000104482.1;transl_table=11
NZ_JJLS01000053.1	RefSeq	gene	5095	5871	.	-	.	ID=gene-AC56_RS23045;Name=AC56_RS23045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23045;old_locus_tag=AC56_5269
NZ_JJLS01000053.1	Protein Homology	CDS	5095	5871	.	-	0	ID=cds-WP_000691857.1;Parent=gene-AC56_RS23045;Dbxref=GenBank:WP_000691857.1;Name=WP_000691857.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000691857.1;locus_tag=AC56_RS23045;product=MBL fold metallo-hydrolase;protein_id=WP_000691857.1;transl_table=11
NZ_JJLS01000053.1	RefSeq	pseudogene	6141	6476	.	+	.	ID=gene-AC56_RS23040;Name=AC56_RS23040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS23040;old_locus_tag=AC56_5270;partial=true;pseudo=true;start_range=.,6141
NZ_JJLS01000053.1	Protein Homology	CDS	6141	6476	.	+	0	ID=cds-AC56_RS23040;Parent=gene-AC56_RS23040;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000848366.1;locus_tag=AC56_RS23040;partial=true;product=Ref family protein;pseudo=true;start_range=.,6141;transl_table=11
NZ_JJLS01000053.1	RefSeq	pseudogene	6666	6971	.	+	.	ID=gene-AC56_RS0124650;Name=AC56_RS0124650;end_range=6971,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0124650;old_locus_tag=AC56_5271;partial=true;pseudo=true
NZ_JJLS01000053.1	Protein Homology	CDS	6666	6971	.	+	0	ID=cds-AC56_RS0124650;Parent=gene-AC56_RS0124650;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=6971,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016231388.1;locus_tag=AC56_RS0124650;partial=true;product=maturation control protein;pseudo=true;transl_table=11
NZ_JJLS01000053.1	RefSeq	gene	7003	7310	.	+	.	ID=gene-AC56_RS0124655;Name=AC56_RS0124655;end_range=7310,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0124655;old_locus_tag=AC56_5272;partial=true
NZ_JJLS01000053.1	Protein Homology	CDS	7003	7310	.	+	0	ID=cds-WP_032255384.1;Parent=gene-AC56_RS0124655;Dbxref=GenBank:WP_032255384.1;Name=WP_032255384.1;end_range=7310,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS0124655;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032255384.1;transl_table=11
##sequence-region NZ_JJLS01000054.1 1 4611
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000054.1	RefSeq	region	1	4611	.	+	.	ID=NZ_JJLS01000054.1:1..4611;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000054.1	RefSeq	pseudogene	1	406	.	+	.	ID=gene-AC56_RS23035;Name=AC56_RS23035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS23035;old_locus_tag=AC56_5273;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000054.1	Protein Homology	CDS	1	406	.	+	1	ID=cds-AC56_RS23035;Parent=gene-AC56_RS23035;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS23035;partial=true;product=IS5-like element IS903B family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000054.1	RefSeq	gene	432	740	.	-	.	ID=gene-AC56_RS33110;Name=AC56_RS33110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33110;old_locus_tag=AC56_5274
NZ_JJLS01000054.1	GeneMarkS-2+	CDS	432	740	.	-	0	ID=cds-WP_248784828.1;Parent=gene-AC56_RS33110;Dbxref=GenBank:WP_248784828.1;Name=WP_248784828.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS33110;product=hypothetical protein;protein_id=WP_248784828.1;transl_table=11
NZ_JJLS01000054.1	RefSeq	gene	770	2074	.	-	.	ID=gene-AC56_RS0124660;Name=AC56_RS0124660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0124660;old_locus_tag=AC56_5275
NZ_JJLS01000054.1	GeneMarkS-2+	CDS	770	2074	.	-	0	ID=cds-WP_248784829.1;Parent=gene-AC56_RS0124660;Dbxref=GenBank:WP_248784829.1;Name=WP_248784829.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS0124660;product=hypothetical protein;protein_id=WP_248784829.1;transl_table=11
NZ_JJLS01000054.1	RefSeq	gene	2067	4115	.	-	.	ID=gene-AC56_RS33115;Name=AC56_RS33115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33115;old_locus_tag=AC56_5276
NZ_JJLS01000054.1	GeneMarkS-2+	CDS	2067	4115	.	-	0	ID=cds-WP_248784830.1;Parent=gene-AC56_RS33115;Dbxref=GenBank:WP_248784830.1;Name=WP_248784830.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS33115;product=hypothetical protein;protein_id=WP_248784830.1;transl_table=11
NZ_JJLS01000054.1	RefSeq	pseudogene	4181	4611	.	-	.	ID=gene-AC56_RS23030;Name=AC56_RS23030;end_range=4611,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS23030;old_locus_tag=AC56_5277;partial=true;pseudo=true
NZ_JJLS01000054.1	Protein Homology	CDS	4181	4611	.	-	2	ID=cds-AC56_RS23030;Parent=gene-AC56_RS23030;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=4611,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS23030;partial=true;product=IS5-like element IS903B family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000055.1 1 3434
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000055.1	RefSeq	region	1	3434	.	+	.	ID=NZ_JJLS01000055.1:1..3434;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000055.1	RefSeq	pseudogene	1	437	.	-	.	ID=gene-AC56_RS23025;Name=AC56_RS23025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS23025;old_locus_tag=AC56_5278;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000055.1	Protein Homology	CDS	1	437	.	-	0	ID=cds-AC56_RS23025;Parent=gene-AC56_RS23025;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS23025;partial=true;product=IS4 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000055.1	RefSeq	pseudogene	493	1092	.	-	.	ID=gene-AC56_RS23020;Name=AC56_RS23020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS23020;old_locus_tag=AC56_5279;partial=true;pseudo=true;start_range=.,493
NZ_JJLS01000055.1	Protein Homology	CDS	493	1092	.	-	0	ID=cds-AC56_RS23020;Parent=gene-AC56_RS23020;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536648.1;locus_tag=AC56_RS23020;partial=true;product=baseplate J/gp47 family protein;pseudo=true;start_range=.,493;transl_table=11
NZ_JJLS01000055.1	RefSeq	gene	1079	1504	.	-	.	ID=gene-AC56_RS23015;Name=AC56_RS23015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23015;old_locus_tag=AC56_5280
NZ_JJLS01000055.1	Protein Homology	CDS	1079	1504	.	-	0	ID=cds-WP_000424732.1-2;Parent=gene-AC56_RS23015;Dbxref=GenBank:WP_000424732.1;Name=WP_000424732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000424727.1;locus_tag=AC56_RS23015;product=phage GP46 family protein;protein_id=WP_000424732.1;transl_table=11
NZ_JJLS01000055.1	RefSeq	gene	1504	2052	.	-	.	ID=gene-AC56_RS23010;Name=AC56_RS23010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23010;old_locus_tag=AC56_5281
NZ_JJLS01000055.1	Protein Homology	CDS	1504	2052	.	-	0	ID=cds-WP_001259074.1-2;Parent=gene-AC56_RS23010;Dbxref=GenBank:WP_001259074.1;Name=WP_001259074.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364403.1;locus_tag=AC56_RS23010;product=phage baseplate assembly protein V;protein_id=WP_001259074.1;transl_table=11
NZ_JJLS01000055.1	RefSeq	gene	2052	3131	.	-	.	ID=gene-AC56_RS23005;Name=AC56_RS23005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS23005;old_locus_tag=AC56_5282
NZ_JJLS01000055.1	Protein Homology	CDS	2052	3131	.	-	0	ID=cds-WP_032277694.1;Parent=gene-AC56_RS23005;Dbxref=GenBank:WP_032277694.1;Name=WP_032277694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559673.1;locus_tag=AC56_RS23005;product=phage baseplate assembly protein;protein_id=WP_032277694.1;transl_table=11
NZ_JJLS01000055.1	RefSeq	pseudogene	3128	3434	.	-	.	ID=gene-AC56_RS23000;Name=AC56_RS23000;end_range=3434,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS23000;old_locus_tag=AC56_5283;partial=true;pseudo=true
NZ_JJLS01000055.1	Protein Homology	CDS	3128	3434	.	-	1	ID=cds-AC56_RS23000;Parent=gene-AC56_RS23000;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=3434,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134766.1;locus_tag=AC56_RS23000;partial=true;product=DNA circularization protein;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000056.1 1 901
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000056.1	RefSeq	region	1	901	.	+	.	ID=NZ_JJLS01000056.1:1..901;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000056.1	RefSeq	gene	22	153	.	+	.	ID=gene-AC56_RS27625;Name=AC56_RS27625;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AC56_RS27625
NZ_JJLS01000056.1	cmsearch	ncRNA	22	153	.	+	.	ID=rna-AC56_RS27625;Parent=gene-AC56_RS27625;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS27625;product=RtT sRNA
NZ_JJLS01000056.1	cmsearch	exon	22	153	.	+	.	ID=exon-AC56_RS27625-1;Parent=rna-AC56_RS27625;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS27625;product=RtT sRNA
NZ_JJLS01000056.1	RefSeq	gene	200	331	.	+	.	ID=gene-AC56_RS27630;Name=AC56_RS27630;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AC56_RS27630
NZ_JJLS01000056.1	cmsearch	ncRNA	200	331	.	+	.	ID=rna-AC56_RS27630;Parent=gene-AC56_RS27630;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS27630;product=RtT sRNA
NZ_JJLS01000056.1	cmsearch	exon	200	331	.	+	.	ID=exon-AC56_RS27630-1;Parent=rna-AC56_RS27630;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS27630;product=RtT sRNA
NZ_JJLS01000056.1	RefSeq	gene	378	509	.	+	.	ID=gene-AC56_RS27635;Name=AC56_RS27635;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AC56_RS27635
NZ_JJLS01000056.1	cmsearch	ncRNA	378	509	.	+	.	ID=rna-AC56_RS27635;Parent=gene-AC56_RS27635;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS27635;product=RtT sRNA
NZ_JJLS01000056.1	cmsearch	exon	378	509	.	+	.	ID=exon-AC56_RS27635-1;Parent=rna-AC56_RS27635;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS27635;product=RtT sRNA
NZ_JJLS01000056.1	RefSeq	gene	556	687	.	+	.	ID=gene-AC56_RS27640;Name=AC56_RS27640;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AC56_RS27640
NZ_JJLS01000056.1	cmsearch	ncRNA	556	687	.	+	.	ID=rna-AC56_RS27640;Parent=gene-AC56_RS27640;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS27640;product=RtT sRNA
NZ_JJLS01000056.1	cmsearch	exon	556	687	.	+	.	ID=exon-AC56_RS27640-1;Parent=rna-AC56_RS27640;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS27640;product=RtT sRNA
##sequence-region NZ_JJLS01000057.1 1 1102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000057.1	RefSeq	region	1	1102	.	+	.	ID=NZ_JJLS01000057.1:1..1102;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000057.1	RefSeq	gene	1	548	.	-	.	ID=gene-AC56_RS28310;Name=AC56_RS28310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS28310;old_locus_tag=AC56_5287;partial=true;start_range=.,1
NZ_JJLS01000057.1	Protein Homology	CDS	1	548	.	-	0	ID=cds-WP_204361917.1;Parent=gene-AC56_RS28310;Dbxref=GenBank:WP_204361917.1;Name=WP_204361917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748652.1;locus_tag=AC56_RS28310;partial=true;product=reverse transcriptase N-terminal domain-containing protein;protein_id=WP_204361917.1;start_range=.,1;transl_table=11
NZ_JJLS01000057.1	RefSeq	gene	810	1102	.	-	.	ID=gene-AC56_RS22995;Name=AC56_RS22995;end_range=1102,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22995;old_locus_tag=AC56_5288;partial=true
NZ_JJLS01000057.1	Protein Homology	CDS	810	1102	.	-	2	ID=cds-WP_139818245.1;Parent=gene-AC56_RS22995;Dbxref=GenBank:WP_139818245.1;Name=WP_139818245.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=1102,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS22995;partial=true;product=transposase;protein_id=WP_139818245.1;transl_table=11
##sequence-region NZ_JJLS01000058.1 1 1172
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000058.1	RefSeq	region	1	1172	.	+	.	ID=NZ_JJLS01000058.1:1..1172;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000058.1	RefSeq	gene	1	290	.	+	.	ID=gene-AC56_RS0124700;Name=AC56_RS0124700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0124700;old_locus_tag=AC56_5289;partial=true;start_range=.,1
NZ_JJLS01000058.1	Protein Homology	CDS	1	290	.	+	2	ID=cds-WP_032175804.1;Parent=gene-AC56_RS0124700;Dbxref=GenBank:WP_032175804.1;Name=WP_032175804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS0124700;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032175804.1;start_range=.,1;transl_table=11
NZ_JJLS01000058.1	RefSeq	pseudogene	342	695	.	+	.	ID=gene-AC56_RS22990;Name=AC56_RS22990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS22990;old_locus_tag=AC56_5290;partial=true;pseudo=true;start_range=.,342
NZ_JJLS01000058.1	Protein Homology	CDS	342	695	.	+	0	ID=cds-AC56_RS22990;Parent=gene-AC56_RS22990;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016236879.1;locus_tag=AC56_RS22990;partial=true;product=hypothetical protein;pseudo=true;start_range=.,342;transl_table=11
NZ_JJLS01000058.1	RefSeq	gene	806	1172	.	+	.	ID=gene-AC56_RS22985;Name=AC56_RS22985;end_range=1172,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22985;old_locus_tag=AC56_5291;partial=true
NZ_JJLS01000058.1	Protein Homology	CDS	806	1172	.	+	0	ID=cds-WP_032282498.1;Parent=gene-AC56_RS22985;Dbxref=GenBank:WP_032282498.1;Name=WP_032282498.1;end_range=1172,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS22985;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032282498.1;transl_table=11
##sequence-region NZ_JJLS01000059.1 1 2675
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000059.1	RefSeq	region	1	2675	.	+	.	ID=NZ_JJLS01000059.1:1..2675;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000059.1	RefSeq	pseudogene	1	317	.	-	.	ID=gene-AC56_RS22980;Name=AC56_RS22980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS22980;old_locus_tag=AC56_5292;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000059.1	Protein Homology	CDS	1	317	.	-	0	ID=cds-AC56_RS22980;Parent=gene-AC56_RS22980;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558238.1;locus_tag=AC56_RS22980;partial=true;product=transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000059.1	RefSeq	pseudogene	372	2291	.	-	.	ID=gene-AC56_RS22975;Name=AC56_RS22975;end_range=2291,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS22975;old_locus_tag=AC56_5293;partial=true;pseudo=true;start_range=.,372
NZ_JJLS01000059.1	Protein Homology	CDS	372	2291	.	-	0	ID=cds-AC56_RS22975;Parent=gene-AC56_RS22975;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0019867;end_range=2291,.;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010344508.1;locus_tag=AC56_RS22975;partial=true;product=autotransporter outer membrane beta-barrel domain-containing protein;pseudo=true;start_range=.,372;transl_table=11
NZ_JJLS01000059.1	RefSeq	gene	2360	2675	.	+	.	ID=gene-AC56_RS22970;Name=AC56_RS22970;end_range=2675,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22970;old_locus_tag=AC56_5294;partial=true
NZ_JJLS01000059.1	Protein Homology	CDS	2360	2675	.	+	0	ID=cds-WP_032282499.1;Parent=gene-AC56_RS22970;Dbxref=GenBank:WP_032282499.1;Name=WP_032282499.1;end_range=2675,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS22970;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032282499.1;transl_table=11
##sequence-region NZ_JJLS01000060.1 1 8707
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000060.1	RefSeq	region	1	8707	.	+	.	ID=NZ_JJLS01000060.1:1..8707;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000060.1	RefSeq	pseudogene	64	495	.	+	.	ID=gene-AC56_RS22965;Name=AC56_RS22965;end_range=495,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS22965;old_locus_tag=AC56_5295;partial=true;pseudo=true
NZ_JJLS01000060.1	Protein Homology	CDS	64	495	.	+	0	ID=cds-AC56_RS22965;Parent=gene-AC56_RS22965;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=495,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_047234906.1;locus_tag=AC56_RS22965;partial=true;product=transposase;pseudo=true;transl_table=11
NZ_JJLS01000060.1	RefSeq	pseudogene	520	2091	.	-	.	ID=gene-AC56_RS27860;Name=tnpC;gbkey=Gene;gene=tnpC;gene_biotype=pseudogene;locus_tag=AC56_RS27860;pseudo=true
NZ_JJLS01000060.1	Protein Homology	CDS	520	2091	.	-	0	ID=cds-AC56_RS27860;Parent=gene-AC56_RS27860;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpC;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904571.1;locus_tag=AC56_RS27860;product=IS66 family transposase;pseudo=true;transl_table=11
NZ_JJLS01000060.1	RefSeq	gene	2111	2458	.	-	.	ID=gene-AC56_RS22955;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AC56_RS22955;old_locus_tag=AC56_5298
NZ_JJLS01000060.1	Protein Homology	CDS	2111	2458	.	-	0	ID=cds-WP_000624622.1-2;Parent=gene-AC56_RS22955;Dbxref=GenBank:WP_000624622.1;Name=WP_000624622.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858152.1;locus_tag=AC56_RS22955;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000624622.1;transl_table=11
NZ_JJLS01000060.1	RefSeq	gene	2458	3108	.	-	.	ID=gene-AC56_RS22950;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AC56_RS22950;old_locus_tag=AC56_5299
NZ_JJLS01000060.1	Protein Homology	CDS	2458	3108	.	-	0	ID=cds-WP_032277748.1;Parent=gene-AC56_RS22950;Dbxref=GenBank:WP_032277748.1;Name=WP_032277748.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;gene=tnpA;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001690050.1;locus_tag=AC56_RS22950;product=IS66-like element accessory protein TnpA;protein_id=WP_032277748.1;transl_table=11
NZ_JJLS01000060.1	RefSeq	pseudogene	3181	3927	.	+	.	ID=gene-AC56_RS27650;Name=AC56_RS27650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS27650;old_locus_tag=AC56_5300;partial=true;pseudo=true;start_range=.,3181
NZ_JJLS01000060.1	Protein Homology	CDS	3181	3927	.	+	0	ID=cds-AC56_RS27650;Parent=gene-AC56_RS27650;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415922.1;locus_tag=AC56_RS27650;partial=true;product=IS30-like element IS30 family transposase;pseudo=true;start_range=.,3181;transl_table=11
NZ_JJLS01000060.1	RefSeq	pseudogene	3937	4197	.	-	.	ID=gene-AC56_RS0124715;Name=AC56_RS0124715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0124715;partial=true;pseudo=true;start_range=.,3937
NZ_JJLS01000060.1	Protein Homology	CDS	3937	4197	.	-	0	ID=cds-AC56_RS0124715;Parent=gene-AC56_RS0124715;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611998.1;locus_tag=AC56_RS0124715;partial=true;product=transposase;pseudo=true;start_range=.,3937;transl_table=11
NZ_JJLS01000060.1	RefSeq	gene	4378	5322	.	-	.	ID=gene-AC56_RS22945;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=AC56_RS22945;old_locus_tag=AC56_5301
NZ_JJLS01000060.1	Protein Homology	CDS	4378	5322	.	-	0	ID=cds-WP_032237807.1;Parent=gene-AC56_RS22945;Dbxref=GenBank:WP_032237807.1;Name=WP_032237807.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009103,GO:0016747,GO:0009276,GO:0016020;gbkey=CDS;gene=lpxM;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858371.1;locus_tag=AC56_RS22945;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WP_032237807.1;transl_table=11
NZ_JJLS01000060.1	RefSeq	gene	5387	6337	.	-	.	ID=gene-AC56_RS22940;Name=virK;gbkey=Gene;gene=virK;gene_biotype=protein_coding;locus_tag=AC56_RS22940;old_locus_tag=AC56_5302
NZ_JJLS01000060.1	Protein Homology	CDS	5387	6337	.	-	0	ID=cds-WP_001724269.1;Parent=gene-AC56_RS22940;Dbxref=GenBank:WP_001724269.1;Name=WP_001724269.1;gbkey=CDS;gene=virK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858370.1;locus_tag=AC56_RS22940;product=virulence factor VirK;protein_id=WP_001724269.1;transl_table=11
NZ_JJLS01000060.1	RefSeq	gene	6342	7430	.	-	.	ID=gene-AC56_RS27865;Name=capU;gbkey=Gene;gene=capU;gene_biotype=protein_coding;locus_tag=AC56_RS27865
NZ_JJLS01000060.1	Protein Homology	CDS	6342	7430	.	-	0	ID=cds-WP_064734945.1;Parent=gene-AC56_RS27865;Dbxref=GenBank:WP_064734945.1;Name=WP_064734945.1;gbkey=CDS;gene=capU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858369.1;locus_tag=AC56_RS27865;product=putative hexosyltransferase CapU;protein_id=WP_064734945.1;transl_table=11
NZ_JJLS01000060.1	RefSeq	gene	7433	8275	.	-	.	ID=gene-AC56_RS22930;Name=AC56_RS22930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22930;old_locus_tag=AC56_5304
NZ_JJLS01000060.1	Protein Homology	CDS	7433	8275	.	-	0	ID=cds-WP_160371899.1;Parent=gene-AC56_RS22930;Dbxref=GenBank:WP_160371899.1;Name=WP_160371899.1;Ontology_term=GO:0005975,GO:0016787,GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858368.1;locus_tag=AC56_RS22930;product=polysaccharide deacetylase family protein;protein_id=WP_160371899.1;transl_table=11
NZ_JJLS01000060.1	RefSeq	pseudogene	8527	8707	.	+	.	ID=gene-AC56_RS32915;Name=AC56_RS32915;end_range=8707,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS32915;partial=true;pseudo=true
NZ_JJLS01000060.1	Protein Homology	CDS	8527	8707	.	+	0	ID=cds-AC56_RS32915;Parent=gene-AC56_RS32915;Note=frameshifted%3B internal stop%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=8707,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AC56_RS32915;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000061.1 1 13374
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000061.1	RefSeq	region	1	13374	.	+	.	ID=NZ_JJLS01000061.1:1..13374;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000061.1	RefSeq	pseudogene	1	345	.	-	.	ID=gene-AC56_RS22925;Name=AC56_RS22925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS22925;old_locus_tag=AC56_5305;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000061.1	Protein Homology	CDS	1	345	.	-	0	ID=cds-AC56_RS22925;Parent=gene-AC56_RS22925;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS22925;partial=true;product=IS4 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000061.1	RefSeq	pseudogene	402	743	.	+	.	ID=gene-AC56_RS28320;Name=AC56_RS28320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS28320;partial=true;pseudo=true;start_range=.,402
NZ_JJLS01000061.1	Protein Homology	CDS	402	743	.	+	0	ID=cds-AC56_RS28320;Parent=gene-AC56_RS28320;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309330.1;locus_tag=AC56_RS28320;partial=true;product=hypothetical protein;pseudo=true;start_range=.,402;transl_table=11
NZ_JJLS01000061.1	RefSeq	gene	1564	2127	.	+	.	ID=gene-AC56_RS22920;Name=AC56_RS22920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22920;old_locus_tag=AC56_5307
NZ_JJLS01000061.1	Protein Homology	CDS	1564	2127	.	+	0	ID=cds-WP_032277685.1;Parent=gene-AC56_RS22920;Dbxref=GenBank:WP_032277685.1;Name=WP_032277685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309331.1;locus_tag=AC56_RS22920;product=inovirus-type Gp2 protein;protein_id=WP_032277685.1;transl_table=11
NZ_JJLS01000061.1	RefSeq	gene	2282	4642	.	+	.	ID=gene-AC56_RS22915;Name=AC56_RS22915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22915;old_locus_tag=AC56_5308
NZ_JJLS01000061.1	Protein Homology	CDS	2282	4642	.	+	0	ID=cds-WP_000233440.1;Parent=gene-AC56_RS22915;Dbxref=GenBank:WP_000233440.1;Name=WP_000233440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000233439.1;locus_tag=AC56_RS22915;product=TOTE conflict system archaeo-eukaryotic primase domain-containing protein;protein_id=WP_000233440.1;transl_table=11
NZ_JJLS01000061.1	RefSeq	gene	4660	4848	.	-	.	ID=gene-AC56_RS22910;Name=AC56_RS22910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22910;old_locus_tag=AC56_5309
NZ_JJLS01000061.1	Protein Homology	CDS	4660	4848	.	-	0	ID=cds-WP_000035067.1;Parent=gene-AC56_RS22910;Dbxref=GenBank:WP_000035067.1;Name=WP_000035067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000035067.1;locus_tag=AC56_RS22910;product=hypothetical protein;protein_id=WP_000035067.1;transl_table=11
NZ_JJLS01000061.1	RefSeq	pseudogene	4915	5295	.	-	.	ID=gene-AC56_RS30890;Name=AC56_RS30890;end_range=5295,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS30890;old_locus_tag=AC56_5310;partial=true;pseudo=true
NZ_JJLS01000061.1	Protein Homology	CDS	4915	5295	.	-	0	ID=cds-AC56_RS30890;Parent=gene-AC56_RS30890;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=5295,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099160.1;locus_tag=AC56_RS30890;partial=true;product=IS66 family transposase;pseudo=true;transl_table=11
NZ_JJLS01000061.1	RefSeq	pseudogene	5301	5555	.	-	.	ID=gene-AC56_RS0124720;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=pseudogene;locus_tag=AC56_RS0124720;old_locus_tag=AC56_5311;partial=true;pseudo=true;start_range=.,5301
NZ_JJLS01000061.1	Protein Homology	CDS	5301	5555	.	-	0	ID=cds-AC56_RS0124720;Parent=gene-AC56_RS0124720;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536669.1;locus_tag=AC56_RS0124720;partial=true;product=IS66 family insertion sequence element accessory protein TnpB;pseudo=true;start_range=.,5301;transl_table=11
NZ_JJLS01000061.1	RefSeq	gene	5552	5956	.	-	.	ID=gene-AC56_RS22900;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AC56_RS22900;old_locus_tag=AC56_5312
NZ_JJLS01000061.1	Protein Homology	CDS	5552	5956	.	-	0	ID=cds-WP_032277686.1;Parent=gene-AC56_RS22900;Dbxref=GenBank:WP_032277686.1;Name=WP_032277686.1;gbkey=CDS;gene=tnpA;inference=COORDINATES: protein motif:HMM:NF047595.1;locus_tag=AC56_RS22900;product=IS66-like element accessory protein TnpA;protein_id=WP_032277686.1;transl_table=11
NZ_JJLS01000061.1	RefSeq	gene	6022	6420	.	+	.	ID=gene-AC56_RS33835;Name=AC56_RS33835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33835;old_locus_tag=AC56_5313
NZ_JJLS01000061.1	Protein Homology	CDS	6022	6420	.	+	0	ID=cds-WP_001529923.1;Parent=gene-AC56_RS33835;Dbxref=GenBank:WP_001529923.1;Name=WP_001529923.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013677.6;locus_tag=AC56_RS33835;product=transposase;protein_id=WP_001529923.1;transl_table=11
NZ_JJLS01000061.1	RefSeq	gene	6556	7128	.	+	.	ID=gene-AC56_RS33840;Name=AC56_RS33840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33840;old_locus_tag=AC56_5315
NZ_JJLS01000061.1	Protein Homology	CDS	6556	7128	.	+	0	ID=cds-WP_023149787.1;Parent=gene-AC56_RS33840;Dbxref=GenBank:WP_023149787.1;Name=WP_023149787.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033516.0;locus_tag=AC56_RS33840;product=IS3 family transposase;protein_id=WP_023149787.1;transl_table=11
NZ_JJLS01000061.1	RefSeq	gene	7144	7368	.	+	.	ID=gene-AC56_RS33845;Name=AC56_RS33845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33845
NZ_JJLS01000061.1	Protein Homology	CDS	7144	7368	.	+	0	ID=cds-WP_404853748.1;Parent=gene-AC56_RS33845;Dbxref=GenBank:WP_404853748.1;Name=WP_404853748.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF025063.6;locus_tag=AC56_RS33845;product=IS3 family transposase;protein_id=WP_404853748.1;transl_table=11
NZ_JJLS01000061.1	RefSeq	pseudogene	7416	7601	.	+	.	ID=gene-AC56_RS0124735;Name=AC56_RS0124735;end_range=7601,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0124735;partial=true;pseudo=true
NZ_JJLS01000061.1	Protein Homology	CDS	7416	7601	.	+	0	ID=cds-AC56_RS0124735;Parent=gene-AC56_RS0124735;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=7601,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751479.1;locus_tag=AC56_RS0124735;partial=true;product=transposase;pseudo=true;transl_table=11
NZ_JJLS01000061.1	RefSeq	gene	8059	8547	.	+	.	ID=gene-AC56_RS0124740;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AC56_RS0124740
NZ_JJLS01000061.1	Protein Homology	CDS	8059	8547	.	+	0	ID=cds-WP_032282501.1;Parent=gene-AC56_RS0124740;Dbxref=GenBank:WP_032282501.1;Name=WP_032282501.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=AC56_RS0124740;product=IS200/IS605 family transposase;protein_id=WP_032282501.1;transl_table=11
NZ_JJLS01000061.1	RefSeq	gene	8665	9603	.	-	.	ID=gene-AC56_RS22895;Name=hypT;gbkey=Gene;gene=hypT;gene_biotype=protein_coding;gene_synonym=qseD;locus_tag=AC56_RS22895;old_locus_tag=AC56_5317
NZ_JJLS01000061.1	Protein Homology	CDS	8665	9603	.	-	0	ID=cds-WP_000789104.1;Parent=gene-AC56_RS22895;Dbxref=GenBank:WP_000789104.1;Name=WP_000789104.1;gbkey=CDS;gene=hypT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000789105.1;locus_tag=AC56_RS22895;product=hypochlorite stress DNA-binding transcriptional regulator HypT;protein_id=WP_000789104.1;transl_table=11
NZ_JJLS01000061.1	RefSeq	gene	9954	10673	.	+	.	ID=gene-AC56_RS22890;Name=AC56_RS22890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22890;old_locus_tag=AC56_5319
NZ_JJLS01000061.1	Protein Homology	CDS	9954	10673	.	+	0	ID=cds-WP_000677245.1;Parent=gene-AC56_RS22890;Dbxref=GenBank:WP_000677245.1;Name=WP_000677245.1;Ontology_term=GO:0047661;gbkey=CDS;go_function=amino-acid racemase activity|0047661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156986.1;locus_tag=AC56_RS22890;product=aspartate/glutamate racemase family protein;protein_id=WP_000677245.1;transl_table=11
NZ_JJLS01000061.1	RefSeq	gene	10739	12037	.	+	.	ID=gene-AC56_RS22885;Name=AC56_RS22885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22885;old_locus_tag=AC56_5320
NZ_JJLS01000061.1	Protein Homology	CDS	10739	12037	.	+	0	ID=cds-WP_000262203.1;Parent=gene-AC56_RS22885;Dbxref=GenBank:WP_000262203.1;Name=WP_000262203.1;Ontology_term=GO:0015740,GO:0015556,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001616045.1;locus_tag=AC56_RS22885;product=anaerobic C4-dicarboxylate transporter;protein_id=WP_000262203.1;transl_table=11
NZ_JJLS01000061.1	RefSeq	pseudogene	12281	13064	.	-	.	ID=gene-AC56_RS22880;Name=AC56_RS22880;end_range=13064,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS22880;old_locus_tag=AC56_5321;partial=true;pseudo=true
NZ_JJLS01000061.1	Protein Homology	CDS	12281	13064	.	-	0	ID=cds-AC56_RS22880;Parent=gene-AC56_RS22880;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=13064,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611998.1;locus_tag=AC56_RS22880;partial=true;product=IS3-like element IS600 family transposase;pseudo=true;transl_table=11
NZ_JJLS01000061.1	RefSeq	pseudogene	13080	13374	.	-	.	ID=gene-AC56_RS22875;Name=AC56_RS22875;end_range=13374,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS22875;old_locus_tag=AC56_5322;partial=true;pseudo=true
NZ_JJLS01000061.1	Protein Homology	CDS	13080	13374	.	-	1	ID=cds-AC56_RS22875;Parent=gene-AC56_RS22875;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=13374,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS22875;partial=true;product=IS1-like element IS1X2 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000062.1 1 7248
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000062.1	RefSeq	region	1	7248	.	+	.	ID=NZ_JJLS01000062.1:1..7248;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000062.1	RefSeq	gene	1	211	.	+	.	ID=gene-AC56_RS22870;Name=AC56_RS22870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22870;old_locus_tag=AC56_5323;partial=true;start_range=.,1
NZ_JJLS01000062.1	Protein Homology	CDS	1	211	.	+	1	ID=cds-WP_032282502.1;Parent=gene-AC56_RS22870;Dbxref=GenBank:WP_032282502.1;Name=WP_032282502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707867.1;locus_tag=AC56_RS22870;partial=true;product=phage tail sheath C-terminal domain-containing protein;protein_id=WP_032282502.1;start_range=.,1;transl_table=11
NZ_JJLS01000062.1	RefSeq	gene	211	567	.	+	.	ID=gene-AC56_RS22865;Name=AC56_RS22865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22865;old_locus_tag=AC56_5324
NZ_JJLS01000062.1	Protein Homology	CDS	211	567	.	+	0	ID=cds-WP_000090993.1;Parent=gene-AC56_RS22865;Dbxref=GenBank:WP_000090993.1;Name=WP_000090993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707866.1;locus_tag=AC56_RS22865;product=phage tail tube protein;protein_id=WP_000090993.1;transl_table=11
NZ_JJLS01000062.1	RefSeq	gene	564	887	.	+	.	ID=gene-AC56_RS22860;Name=AC56_RS22860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22860;old_locus_tag=AC56_5325
NZ_JJLS01000062.1	Protein Homology	CDS	564	887	.	+	0	ID=cds-WP_000571712.1;Parent=gene-AC56_RS22860;Dbxref=GenBank:WP_000571712.1;Name=WP_000571712.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524108.1;locus_tag=AC56_RS22860;product=phage tail assembly protein;protein_id=WP_000571712.1;transl_table=11
NZ_JJLS01000062.1	RefSeq	gene	972	2873	.	+	.	ID=gene-AC56_RS22855;Name=AC56_RS22855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22855;old_locus_tag=AC56_5326
NZ_JJLS01000062.1	Protein Homology	CDS	972	2873	.	+	0	ID=cds-WP_032277691.1;Parent=gene-AC56_RS22855;Dbxref=GenBank:WP_032277691.1;Name=WP_032277691.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001566766.1;locus_tag=AC56_RS22855;product=phage tail tape measure protein;protein_id=WP_032277691.1;transl_table=11
NZ_JJLS01000062.1	RefSeq	gene	2938	3426	.	+	.	ID=gene-AC56_RS22850;Name=AC56_RS22850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22850;old_locus_tag=AC56_5327
NZ_JJLS01000062.1	Protein Homology	CDS	2938	3426	.	+	0	ID=cds-WP_032277692.1;Parent=gene-AC56_RS22850;Dbxref=GenBank:WP_032277692.1;Name=WP_032277692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000738066.1;locus_tag=AC56_RS22850;product=hypothetical protein;protein_id=WP_032277692.1;transl_table=11
NZ_JJLS01000062.1	RefSeq	gene	3483	4856	.	+	.	ID=gene-AC56_RS22845;Name=AC56_RS22845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22845;old_locus_tag=AC56_5328
NZ_JJLS01000062.1	Protein Homology	CDS	3483	4856	.	+	0	ID=cds-WP_032277693.1;Parent=gene-AC56_RS22845;Dbxref=GenBank:WP_032277693.1;Name=WP_032277693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001566763.1;locus_tag=AC56_RS22845;product=DNA circularization protein;protein_id=WP_032277693.1;transl_table=11
NZ_JJLS01000062.1	RefSeq	gene	4853	5932	.	+	.	ID=gene-AC56_RS22840;Name=AC56_RS22840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22840;old_locus_tag=AC56_5329
NZ_JJLS01000062.1	Protein Homology	CDS	4853	5932	.	+	0	ID=cds-WP_032277694.1-2;Parent=gene-AC56_RS22840;Dbxref=GenBank:WP_032277694.1;Name=WP_032277694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559673.1;locus_tag=AC56_RS22840;product=phage baseplate assembly protein;protein_id=WP_032277694.1;transl_table=11
NZ_JJLS01000062.1	RefSeq	gene	5932	6480	.	+	.	ID=gene-AC56_RS22835;Name=AC56_RS22835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22835;old_locus_tag=AC56_5330
NZ_JJLS01000062.1	Protein Homology	CDS	5932	6480	.	+	0	ID=cds-WP_001259074.1-3;Parent=gene-AC56_RS22835;Dbxref=GenBank:WP_001259074.1;Name=WP_001259074.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364403.1;locus_tag=AC56_RS22835;product=phage baseplate assembly protein V;protein_id=WP_001259074.1;transl_table=11
NZ_JJLS01000062.1	RefSeq	gene	6480	6905	.	+	.	ID=gene-AC56_RS22830;Name=AC56_RS22830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22830;old_locus_tag=AC56_5331
NZ_JJLS01000062.1	Protein Homology	CDS	6480	6905	.	+	0	ID=cds-WP_000424732.1-3;Parent=gene-AC56_RS22830;Dbxref=GenBank:WP_000424732.1;Name=WP_000424732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000424727.1;locus_tag=AC56_RS22830;product=phage GP46 family protein;protein_id=WP_000424732.1;transl_table=11
NZ_JJLS01000062.1	RefSeq	pseudogene	6892	7248	.	+	.	ID=gene-AC56_RS22825;Name=AC56_RS22825;end_range=7248,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS22825;old_locus_tag=AC56_5332;partial=true;pseudo=true
NZ_JJLS01000062.1	Protein Homology	CDS	6892	7248	.	+	0	ID=cds-AC56_RS22825;Parent=gene-AC56_RS22825;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=7248,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536648.1;locus_tag=AC56_RS22825;partial=true;product=baseplate J/gp47 family protein;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000063.1 1 10726
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000063.1	RefSeq	region	1	10726	.	+	.	ID=NZ_JJLS01000063.1:1..10726;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000063.1	RefSeq	gene	1	961	.	+	.	ID=gene-AC56_RS22820;Name=AC56_RS22820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22820;old_locus_tag=AC56_5333;partial=true;start_range=.,1
NZ_JJLS01000063.1	Protein Homology	CDS	1	961	.	+	1	ID=cds-WP_032282478.1-2;Parent=gene-AC56_RS22820;Dbxref=GenBank:WP_032282478.1;Name=WP_032282478.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS22820;partial=true;product=IS4-like element IS421 family transposase;protein_id=WP_032282478.1;start_range=.,1;transl_table=11
NZ_JJLS01000063.1	RefSeq	gene	1243	1863	.	-	.	ID=gene-AC56_RS22815;Name=entD;gbkey=Gene;gene=entD;gene_biotype=protein_coding;locus_tag=AC56_RS22815;old_locus_tag=AC56_5334
NZ_JJLS01000063.1	Protein Homology	CDS	1243	1863	.	-	0	ID=cds-WP_001749708.1;Parent=gene-AC56_RS22815;Dbxref=GenBank:WP_001749708.1;Name=WP_001749708.1;Ontology_term=GO:0009239,GO:0000287,GO:0008897,GO:0009366;gbkey=CDS;gene=entD;go_component=enterobactin synthetase complex|0009366||IEA;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=enterobactin biosynthetic process|0009239||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415115.2;locus_tag=AC56_RS22815;product=enterobactin synthase subunit EntD;protein_id=WP_001749708.1;transl_table=11
NZ_JJLS01000063.1	RefSeq	gene	2038	4278	.	-	.	ID=gene-AC56_RS22810;Name=fepA;gbkey=Gene;gene=fepA;gene_biotype=protein_coding;locus_tag=AC56_RS22810;old_locus_tag=AC56_5335
NZ_JJLS01000063.1	Protein Homology	CDS	2038	4278	.	-	0	ID=cds-WP_001689378.1;Parent=gene-AC56_RS22810;Dbxref=GenBank:WP_001689378.1;Name=WP_001689378.1;gbkey=CDS;gene=fepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415116.1;locus_tag=AC56_RS22810;product=siderophore enterobactin receptor FepA;protein_id=WP_001689378.1;transl_table=11
NZ_JJLS01000063.1	RefSeq	gene	4521	5723	.	+	.	ID=gene-AC56_RS22805;Name=fes;gbkey=Gene;gene=fes;gene_biotype=protein_coding;locus_tag=AC56_RS22805;old_locus_tag=AC56_5337
NZ_JJLS01000063.1	Protein Homology	CDS	4521	5723	.	+	0	ID=cds-WP_032277971.1;Parent=gene-AC56_RS22805;Dbxref=GenBank:WP_032277971.1;Name=WP_032277971.1;Ontology_term=GO:0005506,GO:0008849;gbkey=CDS;gene=fes;go_function=iron ion binding|0005506||IEA,enterochelin esterase activity|0008849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308651.2;locus_tag=AC56_RS22805;product=enterochelin esterase;protein_id=WP_032277971.1;transl_table=11
NZ_JJLS01000063.1	RefSeq	gene	5726	5944	.	+	.	ID=gene-AC56_RS22800;Name=ybdZ;gbkey=Gene;gene=ybdZ;gene_biotype=protein_coding;locus_tag=AC56_RS22800;old_locus_tag=AC56_5338
NZ_JJLS01000063.1	Protein Homology	CDS	5726	5944	.	+	0	ID=cds-WP_000885798.1;Parent=gene-AC56_RS22800;Dbxref=GenBank:WP_000885798.1;Name=WP_000885798.1;gbkey=CDS;gene=ybdZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588441.1;locus_tag=AC56_RS22800;product=enterobactin biosynthesis protein YbdZ;protein_id=WP_000885798.1;transl_table=11
NZ_JJLS01000063.1	RefSeq	gene	5941	9822	.	+	.	ID=gene-AC56_RS22795;Name=entF;gbkey=Gene;gene=entF;gene_biotype=protein_coding;locus_tag=AC56_RS22795;old_locus_tag=AC56_5339
NZ_JJLS01000063.1	Protein Homology	CDS	5941	9822	.	+	0	ID=cds-WP_032277972.1;Parent=gene-AC56_RS22795;Dbxref=GenBank:WP_032277972.1;Name=WP_032277972.1;Ontology_term=GO:0009058,GO:0003824,GO:0031177;gbkey=CDS;gene=entF;go_function=catalytic activity|0003824||IEA,phosphopantetheine binding|0031177||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415118.1;locus_tag=AC56_RS22795;product=enterobactin non-ribosomal peptide synthetase EntF;protein_id=WP_032277972.1;transl_table=11
NZ_JJLS01000063.1	RefSeq	pseudogene	10038	10121	.	+	.	ID=gene-AC56_RS33120;Name=AC56_RS33120;end_range=10121,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33120;partial=true;pseudo=true
NZ_JJLS01000063.1	Protein Homology	CDS	10038	10121	.	+	0	ID=cds-AC56_RS33120;Parent=gene-AC56_RS33120;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=10121,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308653.1;locus_tag=AC56_RS33120;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_JJLS01000063.1	RefSeq	pseudogene	10137	10726	.	-	.	ID=gene-AC56_RS22790;Name=AC56_RS22790;end_range=10726,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS22790;old_locus_tag=AC56_5340;partial=true;pseudo=true
NZ_JJLS01000063.1	Protein Homology	CDS	10137	10726	.	-	0	ID=cds-AC56_RS22790;Parent=gene-AC56_RS22790;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0004803;end_range=10726,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=AC56_RS22790;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000064.1 1 3344
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000064.1	RefSeq	region	1	3344	.	+	.	ID=NZ_JJLS01000064.1:1..3344;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000064.1	RefSeq	gene	1	655	.	+	.	ID=gene-AC56_RS22785;Name=AC56_RS22785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22785;old_locus_tag=AC56_5341;partial=true;start_range=.,1
NZ_JJLS01000064.1	Protein Homology	CDS	1	655	.	+	1	ID=cds-WP_032277616.1-4;Parent=gene-AC56_RS22785;Dbxref=GenBank:WP_032277616.1;Name=WP_032277616.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AC56_RS22785;partial=true;product=IS3 family transposase;protein_id=WP_032277616.1;start_range=.,1;transl_table=11
NZ_JJLS01000064.1	RefSeq	gene	639	1448	.	+	.	ID=gene-AC56_RS22780;Name=AC56_RS22780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22780;old_locus_tag=AC56_5342
NZ_JJLS01000064.1	Protein Homology	CDS	639	1448	.	+	0	ID=cds-WP_050439721.1;Parent=gene-AC56_RS22780;Dbxref=GenBank:WP_050439721.1;Name=WP_050439721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001485238.1;locus_tag=AC56_RS22780;product=group II intron maturase-specific domain-containing protein;protein_id=WP_050439721.1;transl_table=11
NZ_JJLS01000064.1	RefSeq	gene	1635	2141	.	+	.	ID=gene-AC56_RS0124750;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AC56_RS0124750
NZ_JJLS01000064.1	Protein Homology	CDS	1635	2141	.	+	0	ID=cds-WP_050439720.1;Parent=gene-AC56_RS0124750;Dbxref=GenBank:WP_050439720.1;Name=WP_050439720.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015730589.1;locus_tag=AC56_RS0124750;product=IS200/IS605 family transposase;protein_id=WP_050439720.1;transl_table=11
NZ_JJLS01000064.1	RefSeq	pseudogene	2381	2506	.	+	.	ID=gene-AC56_RS30900;Name=AC56_RS30900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS30900;partial=true;pseudo=true;start_range=.,2381
NZ_JJLS01000064.1	Protein Homology	CDS	2381	2506	.	+	0	ID=cds-AC56_RS30900;Parent=gene-AC56_RS30900;Note=catalyzes the hydrolysis of 1%2C4-beta-D-glucosidic linkages in cellulose%2C lichenin and cereal beta-D-glucans%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312438.1;locus_tag=AC56_RS30900;partial=true;product=cellulose synthase complex periplasmic endoglucanase BcsZ;pseudo=true;start_range=.,2381;transl_table=11
NZ_JJLS01000064.1	RefSeq	gene	2488	3344	.	+	.	ID=gene-AC56_RS22775;Name=AC56_RS22775;end_range=3344,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22775;old_locus_tag=AC56_5344;partial=true
NZ_JJLS01000064.1	Protein Homology	CDS	2488	3344	.	+	0	ID=cds-WP_032203664.1;Parent=gene-AC56_RS22775;Dbxref=GenBank:WP_032203664.1;Name=WP_032203664.1;end_range=3344,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026226.4;locus_tag=AC56_RS22775;partial=true;product=cellulose synthase;protein_id=WP_032203664.1;transl_table=11
##sequence-region NZ_JJLS01000065.1 1 5883
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000065.1	RefSeq	region	1	5883	.	+	.	ID=NZ_JJLS01000065.1:1..5883;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000065.1	RefSeq	gene	140	1555	.	+	.	ID=gene-AC56_RS22770;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=AC56_RS22770;old_locus_tag=AC56_5346
NZ_JJLS01000065.1	Protein Homology	CDS	140	1555	.	+	0	ID=cds-WP_000695655.1;Parent=gene-AC56_RS22770;Dbxref=GenBank:WP_000695655.1;Name=WP_000695655.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416899.1;locus_tag=AC56_RS22770;product=glutamate--tRNA ligase;protein_id=WP_000695655.1;transl_table=11
NZ_JJLS01000065.1	RefSeq	gene	1607	1999	.	-	.	ID=gene-AC56_RS22765;Name=AC56_RS22765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22765;old_locus_tag=AC56_5347
NZ_JJLS01000065.1	Protein Homology	CDS	1607	1999	.	-	0	ID=cds-WP_000826503.1;Parent=gene-AC56_RS22765;Dbxref=GenBank:WP_000826503.1;Name=WP_000826503.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416898.3;locus_tag=AC56_RS22765;product=MerR family transcriptional regulator;protein_id=WP_000826503.1;transl_table=11
NZ_JJLS01000065.1	RefSeq	gene	2001	2360	.	-	.	ID=gene-AC56_RS22760;Name=AC56_RS22760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22760;old_locus_tag=AC56_5348
NZ_JJLS01000065.1	Protein Homology	CDS	2001	2360	.	-	0	ID=cds-WP_000472021.1;Parent=gene-AC56_RS22760;Dbxref=GenBank:WP_000472021.1;Name=WP_000472021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311301.3;locus_tag=AC56_RS22760;product=YfeC-like transcriptional regulator;protein_id=WP_000472021.1;transl_table=11
NZ_JJLS01000065.1	RefSeq	gene	2581	2656	.	+	.	ID=gene-AC56_RS22755;Name=AC56_RS22755;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS22755;old_locus_tag=AC56_5349
NZ_JJLS01000065.1	tRNAscan-SE	tRNA	2581	2656	.	+	.	ID=rna-AC56_RS22755;Parent=gene-AC56_RS22755;anticodon=(pos:2614..2616);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS22755;product=tRNA-Ala
NZ_JJLS01000065.1	tRNAscan-SE	exon	2581	2656	.	+	.	ID=exon-AC56_RS22755-1;Parent=rna-AC56_RS22755;anticodon=(pos:2614..2616);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS22755;product=tRNA-Ala
NZ_JJLS01000065.1	RefSeq	gene	2696	2771	.	+	.	ID=gene-AC56_RS22750;Name=AC56_RS22750;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS22750;old_locus_tag=AC56_5350
NZ_JJLS01000065.1	tRNAscan-SE	tRNA	2696	2771	.	+	.	ID=rna-AC56_RS22750;Parent=gene-AC56_RS22750;anticodon=(pos:2729..2731);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS22750;product=tRNA-Ala
NZ_JJLS01000065.1	tRNAscan-SE	exon	2696	2771	.	+	.	ID=exon-AC56_RS22750-1;Parent=rna-AC56_RS22750;anticodon=(pos:2729..2731);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS22750;product=tRNA-Ala
NZ_JJLS01000065.1	RefSeq	gene	2811	2886	.	+	.	ID=gene-AC56_RS22745;Name=AC56_RS22745;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS22745;old_locus_tag=AC56_5351
NZ_JJLS01000065.1	tRNAscan-SE	tRNA	2811	2886	.	+	.	ID=rna-AC56_RS22745;Parent=gene-AC56_RS22745;anticodon=(pos:2844..2846);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS22745;product=tRNA-Ala
NZ_JJLS01000065.1	tRNAscan-SE	exon	2811	2886	.	+	.	ID=exon-AC56_RS22745-1;Parent=rna-AC56_RS22745;anticodon=(pos:2844..2846);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS22745;product=tRNA-Ala
NZ_JJLS01000065.1	RefSeq	gene	2926	3001	.	+	.	ID=gene-AC56_RS22740;Name=AC56_RS22740;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS22740;old_locus_tag=AC56_5352
NZ_JJLS01000065.1	tRNAscan-SE	tRNA	2926	3001	.	+	.	ID=rna-AC56_RS22740;Parent=gene-AC56_RS22740;anticodon=(pos:2959..2961);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS22740;product=tRNA-Ala
NZ_JJLS01000065.1	tRNAscan-SE	exon	2926	3001	.	+	.	ID=exon-AC56_RS22740-1;Parent=rna-AC56_RS22740;anticodon=(pos:2959..2961);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS22740;product=tRNA-Ala
NZ_JJLS01000065.1	RefSeq	gene	3210	5399	.	+	.	ID=gene-AC56_RS22735;Name=AC56_RS22735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22735;old_locus_tag=AC56_5353
NZ_JJLS01000065.1	Protein Homology	CDS	3210	5399	.	+	0	ID=cds-WP_000497400.1;Parent=gene-AC56_RS22735;Dbxref=GenBank:WP_000497400.1;Name=WP_000497400.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621,GO:0071111;gbkey=CDS;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416896.4;locus_tag=AC56_RS22735;product=bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_000497400.1;transl_table=11
NZ_JJLS01000065.1	RefSeq	pseudogene	5483	5883	.	+	.	ID=gene-AC56_RS22730;Name=AC56_RS22730;end_range=5883,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS22730;old_locus_tag=AC56_5354;partial=true;pseudo=true
NZ_JJLS01000065.1	Protein Homology	CDS	5483	5883	.	+	0	ID=cds-AC56_RS22730;Parent=gene-AC56_RS22730;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=5883,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS22730;partial=true;product=IS4 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000066.1 1 1705
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000066.1	RefSeq	region	1	1705	.	+	.	ID=NZ_JJLS01000066.1:1..1705;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000066.1	RefSeq	pseudogene	9	213	.	+	.	ID=gene-AC56_RS33125;Name=AC56_RS33125;end_range=213,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33125;partial=true;pseudo=true
NZ_JJLS01000066.1	Protein Homology	CDS	9	213	.	+	0	ID=cds-AC56_RS33125;Parent=gene-AC56_RS33125;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=213,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AC56_RS33125;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_JJLS01000066.1	RefSeq	pseudogene	213	311	.	+	.	ID=gene-AC56_RS28365;Name=AC56_RS28365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS28365;partial=true;pseudo=true;start_range=.,213
NZ_JJLS01000066.1	Protein Homology	CDS	213	311	.	+	0	ID=cds-AC56_RS28365;Parent=gene-AC56_RS28365;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612091.1;locus_tag=AC56_RS28365;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,213;transl_table=11
NZ_JJLS01000066.1	RefSeq	gene	615	908	.	+	.	ID=gene-AC56_RS22725;Name=AC56_RS22725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22725;old_locus_tag=AC56_5355
NZ_JJLS01000066.1	Protein Homology	CDS	615	908	.	+	0	ID=cds-WP_248790142.1;Parent=gene-AC56_RS22725;Dbxref=GenBank:WP_248790142.1;Name=WP_248790142.1;Ontology_term=GO:0071468;gbkey=CDS;go_process=cellular response to acidic pH|0071468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016230781.1;locus_tag=AC56_RS22725;product=biofilm development regulator YmgB/AriR family protein;protein_id=WP_248790142.1;transl_table=11
NZ_JJLS01000066.1	RefSeq	pseudogene	1134	1705	.	+	.	ID=gene-AC56_RS22720;Name=AC56_RS22720;end_range=1705,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS22720;old_locus_tag=AC56_5356;partial=true;pseudo=true
NZ_JJLS01000066.1	Protein Homology	CDS	1134	1705	.	+	0	ID=cds-AC56_RS22720;Parent=gene-AC56_RS22720;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;end_range=1705,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=AC56_RS22720;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000067.1 1 3268
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000067.1	RefSeq	region	1	3268	.	+	.	ID=NZ_JJLS01000067.1:1..3268;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000067.1	RefSeq	pseudogene	1	136	.	-	.	ID=gene-AC56_RS33130;Name=AC56_RS33130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33130;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000067.1	Protein Homology	CDS	1	136	.	-	0	ID=cds-AC56_RS33130;Parent=gene-AC56_RS33130;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858330.2;locus_tag=AC56_RS33130;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000067.1	RefSeq	gene	160	582	.	-	.	ID=gene-AC56_RS22715;Name=AC56_RS22715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22715;old_locus_tag=AC56_5357
NZ_JJLS01000067.1	Protein Homology	CDS	160	582	.	-	0	ID=cds-WP_000774834.1;Parent=gene-AC56_RS22715;Dbxref=GenBank:WP_000774834.1;Name=WP_000774834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001617754.1;locus_tag=AC56_RS22715;product=plasmid partitioning/stability family protein;protein_id=WP_000774834.1;transl_table=11
NZ_JJLS01000067.1	RefSeq	gene	585	1565	.	-	.	ID=gene-AC56_RS22710;Name=AC56_RS22710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22710;old_locus_tag=AC56_5358
NZ_JJLS01000067.1	Protein Homology	CDS	585	1565	.	-	0	ID=cds-WP_001218107.1;Parent=gene-AC56_RS22710;Dbxref=GenBank:WP_001218107.1;Name=WP_001218107.1;Ontology_term=GO:0030541,GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;go_process=plasmid partitioning|0030541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396154.1;locus_tag=AC56_RS22710;product=plasmid segregation protein ParM;protein_id=WP_001218107.1;transl_table=11
NZ_JJLS01000067.1	RefSeq	gene	1903	2238	.	+	.	ID=gene-AC56_RS22705;Name=AC56_RS22705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22705;old_locus_tag=AC56_5360
NZ_JJLS01000067.1	Protein Homology	CDS	1903	2238	.	+	0	ID=cds-WP_001340323.1;Parent=gene-AC56_RS22705;Dbxref=GenBank:WP_001340323.1;Name=WP_001340323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001579148.1;locus_tag=AC56_RS22705;product=hypothetical protein;protein_id=WP_001340323.1;transl_table=11
NZ_JJLS01000067.1	RefSeq	gene	2501	3205	.	-	.	ID=gene-AC56_RS22700;Name=AC56_RS22700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22700;old_locus_tag=AC56_5361
NZ_JJLS01000067.1	Protein Homology	CDS	2501	3205	.	-	0	ID=cds-WP_001067855.1-2;Parent=gene-AC56_RS22700;Dbxref=GenBank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=AC56_RS22700;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11
##sequence-region NZ_JJLS01000068.1 1 646
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000068.1	RefSeq	region	1	646	.	+	.	ID=NZ_JJLS01000068.1:1..646;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000068.1	RefSeq	gene	1	504	.	-	.	ID=gene-AC56_RS0124760;Name=AC56_RS0124760;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC56_RS0124760;partial=true;start_range=.,1
NZ_JJLS01000068.1	cmsearch	rRNA	1	504	.	-	.	ID=rna-AC56_RS0124760;Parent=gene-AC56_RS0124760;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS0124760;partial=true;product=16S ribosomal RNA;start_range=.,1
NZ_JJLS01000068.1	cmsearch	exon	1	504	.	-	.	ID=exon-AC56_RS0124760-1;Parent=rna-AC56_RS0124760;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS0124760;partial=true;product=16S ribosomal RNA;start_range=.,1
##sequence-region NZ_JJLS01000069.1 1 23877
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000069.1	RefSeq	region	1	23877	.	+	.	ID=NZ_JJLS01000069.1:1..23877;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000069.1	RefSeq	gene	1	352	.	-	.	ID=gene-AC56_RS22695;Name=AC56_RS22695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22695;old_locus_tag=AC56_5362;partial=true;start_range=.,1
NZ_JJLS01000069.1	Protein Homology	CDS	1	352	.	-	0	ID=cds-WP_032282505.1;Parent=gene-AC56_RS22695;Dbxref=GenBank:WP_032282505.1;Name=WP_032282505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS22695;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032282505.1;start_range=.,1;transl_table=11
NZ_JJLS01000069.1	RefSeq	gene	492	1382	.	+	.	ID=gene-AC56_RS22690;Name=galF;gbkey=Gene;gene=galF;gene_biotype=protein_coding;locus_tag=AC56_RS22690;old_locus_tag=AC56_5363
NZ_JJLS01000069.1	Protein Homology	CDS	492	1382	.	+	0	ID=cds-WP_002434801.1;Parent=gene-AC56_RS22690;Dbxref=GenBank:WP_002434801.1;Name=WP_002434801.1;gbkey=CDS;gene=galF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124332.1;locus_tag=AC56_RS22690;product=UTP--glucose-1-phosphate uridylyltransferase GalF;protein_id=WP_002434801.1;transl_table=11
NZ_JJLS01000069.1	RefSeq	gene	1820	3235	.	+	.	ID=gene-AC56_RS22685;Name=AC56_RS22685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22685;old_locus_tag=AC56_5364
NZ_JJLS01000069.1	Protein Homology	CDS	1820	3235	.	+	0	ID=cds-WP_032277570.1;Parent=gene-AC56_RS22685;Dbxref=GenBank:WP_032277570.1;Name=WP_032277570.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019725197.1;locus_tag=AC56_RS22685;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_032277570.1;transl_table=11
NZ_JJLS01000069.1	RefSeq	gene	3250	4635	.	+	.	ID=gene-AC56_RS22680;Name=cpsG;gbkey=Gene;gene=cpsG;gene_biotype=protein_coding;locus_tag=AC56_RS22680;old_locus_tag=AC56_5365
NZ_JJLS01000069.1	Protein Homology	CDS	3250	4635	.	+	0	ID=cds-WP_032277571.1;Parent=gene-AC56_RS22680;Dbxref=GenBank:WP_032277571.1;Name=WP_032277571.1;gbkey=CDS;gene=cpsG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013319592.1;locus_tag=AC56_RS22680;product=phosphomannomutase CpsG;protein_id=WP_032277571.1;transl_table=11
NZ_JJLS01000069.1	RefSeq	gene	4649	5773	.	+	.	ID=gene-AC56_RS22675;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=AC56_RS22675;old_locus_tag=AC56_5366
NZ_JJLS01000069.1	Protein Homology	CDS	4649	5773	.	+	0	ID=cds-WP_032277572.1;Parent=gene-AC56_RS22675;Dbxref=GenBank:WP_032277572.1;Name=WP_032277572.1;Ontology_term=GO:0000271,GO:0019673,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,GDP-mannose metabolic process|0019673||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014907227.1;locus_tag=AC56_RS22675;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_032277572.1;transl_table=11
NZ_JJLS01000069.1	RefSeq	gene	5789	6880	.	+	.	ID=gene-AC56_RS22670;Name=AC56_RS22670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22670;old_locus_tag=AC56_5367
NZ_JJLS01000069.1	Protein Homology	CDS	5789	6880	.	+	0	ID=cds-WP_198527937.1;Parent=gene-AC56_RS22670;Dbxref=GenBank:WP_198527937.1;Name=WP_198527937.1;Ontology_term=GO:0008483;gbkey=CDS;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310868.2;locus_tag=AC56_RS22670;product=DegT/DnrJ/EryC1/StrS family aminotransferase;protein_id=WP_198527937.1;transl_table=11
NZ_JJLS01000069.1	RefSeq	gene	6927	7709	.	+	.	ID=gene-AC56_RS22665;Name=AC56_RS22665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22665;old_locus_tag=AC56_5368
NZ_JJLS01000069.1	Protein Homology	CDS	6927	7709	.	+	0	ID=cds-WP_063117173.1;Parent=gene-AC56_RS22665;Dbxref=GenBank:WP_063117173.1;Name=WP_063117173.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649621.1;locus_tag=AC56_RS22665;product=ABC transporter permease;protein_id=WP_063117173.1;transl_table=11
NZ_JJLS01000069.1	RefSeq	gene	7706	8452	.	+	.	ID=gene-AC56_RS22660;Name=AC56_RS22660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22660;old_locus_tag=AC56_5369
NZ_JJLS01000069.1	Protein Homology	CDS	7706	8452	.	+	0	ID=cds-WP_032277573.1;Parent=gene-AC56_RS22660;Dbxref=GenBank:WP_032277573.1;Name=WP_032277573.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649622.1;locus_tag=AC56_RS22660;product=ABC transporter ATP-binding protein;protein_id=WP_032277573.1;transl_table=11
NZ_JJLS01000069.1	RefSeq	gene	8449	10785	.	+	.	ID=gene-AC56_RS22655;Name=AC56_RS22655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22655;old_locus_tag=AC56_5370
NZ_JJLS01000069.1	GeneMarkS-2+	CDS	8449	10785	.	+	0	ID=cds-WP_032277574.1;Parent=gene-AC56_RS22655;Dbxref=GenBank:WP_032277574.1;Name=WP_032277574.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS22655;product=hypothetical protein;protein_id=WP_032277574.1;transl_table=11
NZ_JJLS01000069.1	RefSeq	gene	10782	12422	.	+	.	ID=gene-AC56_RS22650;Name=AC56_RS22650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22650;old_locus_tag=AC56_5371
NZ_JJLS01000069.1	Protein Homology	CDS	10782	12422	.	+	0	ID=cds-WP_050439719.1;Parent=gene-AC56_RS22650;Dbxref=GenBank:WP_050439719.1;Name=WP_050439719.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: protein motif:HMM:NF012744.6;locus_tag=AC56_RS22650;product=glycosyltransferase;protein_id=WP_050439719.1;transl_table=11
NZ_JJLS01000069.1	RefSeq	gene	12409	13032	.	+	.	ID=gene-AC56_RS22645;Name=AC56_RS22645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22645;old_locus_tag=AC56_5372
NZ_JJLS01000069.1	Protein Homology	CDS	12409	13032	.	+	0	ID=cds-WP_032277575.1;Parent=gene-AC56_RS22645;Dbxref=GenBank:WP_032277575.1;Name=WP_032277575.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: protein motif:HMM:TIGR03570.1;locus_tag=AC56_RS22645;product=NeuD/PglB/VioB family sugar acetyltransferase;protein_id=WP_032277575.1;transl_table=11
NZ_JJLS01000069.1	RefSeq	gene	13042	14148	.	+	.	ID=gene-AC56_RS22640;Name=AC56_RS22640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22640;old_locus_tag=AC56_5373
NZ_JJLS01000069.1	Protein Homology	CDS	13042	14148	.	+	0	ID=cds-WP_032277577.1;Parent=gene-AC56_RS22640;Dbxref=GenBank:WP_032277577.1;Name=WP_032277577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014333790.1;locus_tag=AC56_RS22640;product=glycosyltransferase family 4 protein;protein_id=WP_032277577.1;transl_table=11
NZ_JJLS01000069.1	RefSeq	gene	14341	15756	.	+	.	ID=gene-AC56_RS22635;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=AC56_RS22635;old_locus_tag=AC56_5374
NZ_JJLS01000069.1	Protein Homology	CDS	14341	15756	.	+	0	ID=cds-WP_032277578.1;Parent=gene-AC56_RS22635;Dbxref=GenBank:WP_032277578.1;Name=WP_032277578.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439962.1;locus_tag=AC56_RS22635;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_032277578.1;transl_table=11
NZ_JJLS01000069.1	RefSeq	gene	16201	17139	.	+	.	ID=gene-AC56_RS22630;Name=AC56_RS22630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22630;old_locus_tag=AC56_5375
NZ_JJLS01000069.1	Protein Homology	CDS	16201	17139	.	+	0	ID=cds-WP_204361847.1;Parent=gene-AC56_RS22630;Dbxref=GenBank:WP_204361847.1;Name=WP_204361847.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004723346.1;locus_tag=AC56_RS22630;product=glycosyltransferase family 2 protein;protein_id=WP_204361847.1;transl_table=11
NZ_JJLS01000069.1	RefSeq	gene	17136	17543	.	+	.	ID=gene-AC56_RS33850;Name=AC56_RS33850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33850
NZ_JJLS01000069.1	Protein Homology	CDS	17136	17543	.	+	0	ID=cds-WP_077746148.1;Parent=gene-AC56_RS33850;Dbxref=GenBank:WP_077746148.1;Name=WP_077746148.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: protein motif:HMM:NF016060.6;locus_tag=AC56_RS33850;product=GtrA family protein;protein_id=WP_077746148.1;transl_table=11
NZ_JJLS01000069.1	RefSeq	gene	17684	19228	.	-	.	ID=gene-AC56_RS22625;Name=AC56_RS22625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22625;old_locus_tag=AC56_5377
NZ_JJLS01000069.1	GeneMarkS-2+	CDS	17684	19228	.	-	0	ID=cds-WP_032282506.1;Parent=gene-AC56_RS22625;Dbxref=GenBank:WP_032282506.1;Name=WP_032282506.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS22625;product=hypothetical protein;protein_id=WP_032282506.1;transl_table=11
NZ_JJLS01000069.1	RefSeq	gene	19492	22389	.	-	.	ID=gene-AC56_RS22620;Name=AC56_RS22620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22620;old_locus_tag=AC56_5378
NZ_JJLS01000069.1	Protein Homology	CDS	19492	22389	.	-	0	ID=cds-WP_001553819.1;Parent=gene-AC56_RS22620;Dbxref=GenBank:WP_001553819.1;Name=WP_001553819.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020326821.1;locus_tag=AC56_RS22620;product=Tn3-like element Tn5403 family transposase;protein_id=WP_001553819.1;transl_table=11
NZ_JJLS01000069.1	RefSeq	gene	22484	23089	.	+	.	ID=gene-AC56_RS0124765;Name=AC56_RS0124765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0124765
NZ_JJLS01000069.1	Protein Homology	CDS	22484	23089	.	+	0	ID=cds-WP_000509966.1;Parent=gene-AC56_RS0124765;Dbxref=GenBank:WP_000509966.1;Name=WP_000509966.1;Ontology_term=GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549957.1;locus_tag=AC56_RS0124765;product=recombinase family protein;protein_id=WP_000509966.1;transl_table=11
NZ_JJLS01000069.1	RefSeq	pseudogene	23280	23636	.	+	.	ID=gene-AC56_RS22615;Name=AC56_RS22615;end_range=23636,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS22615;old_locus_tag=AC56_5380;partial=true;pseudo=true
NZ_JJLS01000069.1	Protein Homology	CDS	23280	23636	.	+	0	ID=cds-AC56_RS22615;Parent=gene-AC56_RS22615;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=23636,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009452950.1;locus_tag=AC56_RS22615;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_JJLS01000069.1	RefSeq	gene	23670	23877	.	+	.	ID=gene-AC56_RS31850;Name=AC56_RS31850;end_range=23877,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS31850;old_locus_tag=AC56_5381;partial=true
NZ_JJLS01000069.1	Protein Homology	CDS	23670	23877	.	+	0	ID=cds-WP_174617106.1;Parent=gene-AC56_RS31850;Dbxref=GenBank:WP_174617106.1;Name=WP_174617106.1;end_range=23877,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS31850;partial=true;product=transposase;protein_id=WP_174617106.1;transl_table=11
##sequence-region NZ_JJLS01000070.1 1 891
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000070.1	RefSeq	region	1	891	.	+	.	ID=NZ_JJLS01000070.1:1..891;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000070.1	RefSeq	gene	1	860	.	+	.	ID=gene-AC56_RS33855;Name=AC56_RS33855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33855;old_locus_tag=AC56_5382;partial=true;start_range=.,1
NZ_JJLS01000070.1	Protein Homology	CDS	1	860	.	+	2	ID=cds-WP_032282508.1;Parent=gene-AC56_RS33855;Dbxref=GenBank:WP_032282508.1;Name=WP_032282508.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AC56_RS33855;partial=true;product=IS3 family transposase;protein_id=WP_032282508.1;start_range=.,1;transl_table=11
##sequence-region NZ_JJLS01000071.1 1 326
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000071.1	RefSeq	region	1	326	.	+	.	ID=NZ_JJLS01000071.1:1..326;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000071.1	RefSeq	pseudogene	1	301	.	-	.	ID=gene-AC56_RS28380;Name=AC56_RS28380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS28380;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000071.1	Protein Homology	CDS	1	301	.	-	0	ID=cds-AC56_RS28380;Parent=gene-AC56_RS28380;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS28380;partial=true;product=IS1-like element transposase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_JJLS01000072.1 1 2258
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000072.1	RefSeq	region	1	2258	.	+	.	ID=NZ_JJLS01000072.1:1..2258;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000072.1	RefSeq	gene	1	960	.	-	.	ID=gene-AC56_RS22605;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=AC56_RS22605;old_locus_tag=AC56_5385;partial=true;start_range=.,1
NZ_JJLS01000072.1	Protein Homology	CDS	1	960	.	-	0	ID=cds-WP_032180257.1;Parent=gene-AC56_RS22605;Dbxref=GenBank:WP_032180257.1;Name=WP_032180257.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416899.1;locus_tag=AC56_RS22605;partial=true;product=glutamate--tRNA ligase;protein_id=WP_032180257.1;start_range=.,1;transl_table=11
NZ_JJLS01000072.1	RefSeq	gene	1219	1294	.	+	.	ID=gene-AC56_RS22600;Name=AC56_RS22600;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS22600;old_locus_tag=AC56_5387
NZ_JJLS01000072.1	tRNAscan-SE	tRNA	1219	1294	.	+	.	ID=rna-AC56_RS22600;Parent=gene-AC56_RS22600;anticodon=(pos:1252..1254);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS22600;product=tRNA-Val
NZ_JJLS01000072.1	tRNAscan-SE	exon	1219	1294	.	+	.	ID=exon-AC56_RS22600-1;Parent=rna-AC56_RS22600;anticodon=(pos:1252..1254);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS22600;product=tRNA-Val
NZ_JJLS01000072.1	RefSeq	gene	1339	1414	.	+	.	ID=gene-AC56_RS22595;Name=AC56_RS22595;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS22595;old_locus_tag=AC56_5388
NZ_JJLS01000072.1	tRNAscan-SE	tRNA	1339	1414	.	+	.	ID=rna-AC56_RS22595;Parent=gene-AC56_RS22595;anticodon=(pos:1372..1374);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS22595;product=tRNA-Val
NZ_JJLS01000072.1	tRNAscan-SE	exon	1339	1414	.	+	.	ID=exon-AC56_RS22595-1;Parent=rna-AC56_RS22595;anticodon=(pos:1372..1374);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS22595;product=tRNA-Val
NZ_JJLS01000072.1	RefSeq	gene	1417	1492	.	+	.	ID=gene-AC56_RS22590;Name=AC56_RS22590;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS22590;old_locus_tag=AC56_5389
NZ_JJLS01000072.1	tRNAscan-SE	tRNA	1417	1492	.	+	.	ID=rna-AC56_RS22590;Parent=gene-AC56_RS22590;anticodon=(pos:1450..1452);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS22590;product=tRNA-Lys
NZ_JJLS01000072.1	tRNAscan-SE	exon	1417	1492	.	+	.	ID=exon-AC56_RS22590-1;Parent=rna-AC56_RS22590;anticodon=(pos:1450..1452);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS22590;product=tRNA-Lys
NZ_JJLS01000072.1	RefSeq	gene	1612	1953	.	+	.	ID=gene-AC56_RS22585;Name=AC56_RS22585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22585;old_locus_tag=AC56_5390
NZ_JJLS01000072.1	Protein Homology	CDS	1612	1953	.	+	0	ID=cds-WP_000201405.1;Parent=gene-AC56_RS22585;Dbxref=GenBank:WP_000201405.1;Name=WP_000201405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708263.1;locus_tag=AC56_RS22585;product=FlxA-like family protein;protein_id=WP_000201405.1;transl_table=11
NZ_JJLS01000072.1	RefSeq	gene	1944	2258	.	-	.	ID=gene-AC56_RS22580;Name=AC56_RS22580;end_range=2258,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22580;old_locus_tag=AC56_5391;partial=true
NZ_JJLS01000072.1	Protein Homology	CDS	1944	2258	.	-	0	ID=cds-WP_032282511.1;Parent=gene-AC56_RS22580;Dbxref=GenBank:WP_032282511.1;Name=WP_032282511.1;end_range=2258,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416904.1;locus_tag=AC56_RS22580;partial=true;product=LysR substrate-binding domain-containing protein;protein_id=WP_032282511.1;transl_table=11
##sequence-region NZ_JJLS01000073.1 1 956
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000073.1	RefSeq	region	1	956	.	+	.	ID=NZ_JJLS01000073.1:1..956;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000073.1	RefSeq	gene	1	876	.	+	.	ID=gene-AC56_RS22575;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=AC56_RS22575;old_locus_tag=AC56_5392;partial=true;start_range=.,1
NZ_JJLS01000073.1	Protein Homology	CDS	1	876	.	+	0	ID=cds-WP_032282512.1;Parent=gene-AC56_RS22575;Dbxref=GenBank:WP_032282512.1;Name=WP_032282512.1;Ontology_term=GO:0033014,GO:0004655;gbkey=CDS;gene=hemB;go_function=porphobilinogen synthase activity|0004655||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308450.2;locus_tag=AC56_RS22575;partial=true;product=porphobilinogen synthase;protein_id=WP_032282512.1;start_range=.,1;transl_table=11
##sequence-region NZ_JJLS01000074.1 1 2381
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000074.1	RefSeq	region	1	2381	.	+	.	ID=NZ_JJLS01000074.1:1..2381;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000074.1	RefSeq	pseudogene	1	476	.	-	.	ID=gene-AC56_RS30905;Name=AC56_RS30905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS30905;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000074.1	Protein Homology	CDS	1	476	.	-	0	ID=cds-AC56_RS30905;Parent=gene-AC56_RS30905;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS30905;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000074.1	RefSeq	gene	534	1862	.	+	.	ID=gene-AC56_RS22565;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=AC56_RS22565;old_locus_tag=AC56_5394
NZ_JJLS01000074.1	Protein Homology	CDS	534	1862	.	+	0	ID=cds-WP_001338760.1;Parent=gene-AC56_RS22565;Dbxref=GenBank:WP_001338760.1;Name=WP_001338760.1;gbkey=CDS;gene=dcuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417694.1;locus_tag=AC56_RS22565;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WP_001338760.1;transl_table=11
NZ_JJLS01000074.1	RefSeq	gene	1905	2381	.	-	.	ID=gene-AC56_RS22560;Name=sspB;end_range=2381,.;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=AC56_RS22560;old_locus_tag=AC56_5395;partial=true
NZ_JJLS01000074.1	Protein Homology	CDS	1905	2381	.	-	0	ID=cds-WP_064735267.1;Parent=gene-AC56_RS22560;Dbxref=GenBank:WP_064735267.1;Name=WP_064735267.1;end_range=2381,.;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312128.1;locus_tag=AC56_RS22560;partial=true;product=ClpXP protease specificity-enhancing factor;protein_id=WP_064735267.1;transl_table=11
##sequence-region NZ_JJLS01000075.1 1 906
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000075.1	RefSeq	region	1	906	.	+	.	ID=NZ_JJLS01000075.1:1..906;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000075.1	RefSeq	pseudogene	1	286	.	+	.	ID=gene-AC56_RS22555;Name=AC56_RS22555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS22555;old_locus_tag=AC56_5396;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000075.1	Protein Homology	CDS	1	286	.	+	1	ID=cds-AC56_RS22555;Parent=gene-AC56_RS22555;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS22555;partial=true;product=IS1-like element IS1X2 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000075.1	RefSeq	pseudogene	316	906	.	-	.	ID=gene-AC56_RS22550;Name=AC56_RS22550;end_range=906,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS22550;old_locus_tag=AC56_5397;partial=true;pseudo=true
NZ_JJLS01000075.1	Protein Homology	CDS	316	906	.	-	0	ID=cds-AC56_RS22550;Parent=gene-AC56_RS22550;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=906,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414793.2;locus_tag=AC56_RS22550;partial=true;product=IS5-like element ISKpn26 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000076.1 1 2819
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000076.1	RefSeq	region	1	2819	.	+	.	ID=NZ_JJLS01000076.1:1..2819;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000076.1	RefSeq	gene	53	757	.	-	.	ID=gene-AC56_RS22545;Name=AC56_RS22545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22545;old_locus_tag=AC56_5398
NZ_JJLS01000076.1	Protein Homology	CDS	53	757	.	-	0	ID=cds-WP_001067855.1-3;Parent=gene-AC56_RS22545;Dbxref=GenBank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=AC56_RS22545;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11
NZ_JJLS01000076.1	RefSeq	gene	794	1450	.	-	.	ID=gene-AC56_RS0124770;Name=AC56_RS0124770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0124770
NZ_JJLS01000076.1	Protein Homology	CDS	794	1450	.	-	0	ID=cds-WP_000144779.1;Parent=gene-AC56_RS0124770;Dbxref=GenBank:WP_000144779.1;Name=WP_000144779.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000144779.1;locus_tag=AC56_RS0124770;product=metallophosphoesterase;protein_id=WP_000144779.1;transl_table=11
NZ_JJLS01000076.1	RefSeq	gene	1447	1956	.	-	.	ID=gene-AC56_RS0124775;Name=dfrA8;gbkey=Gene;gene=dfrA8;gene_biotype=protein_coding;locus_tag=AC56_RS0124775
NZ_JJLS01000076.1	Protein Homology	CDS	1447	1956	.	-	0	ID=cds-WP_000571065.1;Parent=gene-AC56_RS0124775;Dbxref=GenBank:WP_000571065.1;Name=WP_000571065.1;Ontology_term=GO:0004146;gbkey=CDS;gene=dfrA8;go_function=dihydrofolate reductase activity|0004146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000571065.1;locus_tag=AC56_RS0124775;product=trimethoprim-resistant dihydrofolate reductase DfrA8;protein_id=WP_000571065.1;transl_table=11
NZ_JJLS01000076.1	RefSeq	gene	2052	2756	.	-	.	ID=gene-AC56_RS22540;Name=AC56_RS22540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22540;old_locus_tag=AC56_5402
NZ_JJLS01000076.1	Protein Homology	CDS	2052	2756	.	-	0	ID=cds-WP_001067855.1-4;Parent=gene-AC56_RS22540;Dbxref=GenBank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=AC56_RS22540;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11
##sequence-region NZ_JJLS01000077.1 1 14066
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000077.1	RefSeq	region	1	14066	.	+	.	ID=NZ_JJLS01000077.1:1..14066;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000077.1	RefSeq	gene	1	62	.	-	.	ID=gene-AC56_RS28400;Name=AC56_RS28400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS28400;partial=true;start_range=.,1
NZ_JJLS01000077.1	Protein Homology	CDS	1	62	.	-	0	ID=cds-WP_311439599.1;Parent=gene-AC56_RS28400;Dbxref=GenBank:WP_311439599.1;Name=WP_311439599.1;Ontology_term=GO:0006276;gbkey=CDS;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052674.1;locus_tag=AC56_RS28400;partial=true;product=RepB family protein;protein_id=WP_311439599.1;start_range=.,1;transl_table=11
NZ_JJLS01000077.1	RefSeq	gene	302	892	.	-	.	ID=gene-AC56_RS22535;Name=AC56_RS22535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22535;old_locus_tag=AC56_5403
NZ_JJLS01000077.1	Protein Homology	CDS	302	892	.	-	0	ID=cds-WP_000766807.1;Parent=gene-AC56_RS22535;Dbxref=GenBank:WP_000766807.1;Name=WP_000766807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858390.1;locus_tag=AC56_RS22535;product=DUF2726 domain-containing protein;protein_id=WP_000766807.1;transl_table=11
NZ_JJLS01000077.1	RefSeq	gene	930	1139	.	-	.	ID=gene-AC56_RS22530;Name=hha;gbkey=Gene;gene=hha;gene_biotype=protein_coding;locus_tag=AC56_RS22530;old_locus_tag=AC56_5404
NZ_JJLS01000077.1	Protein Homology	CDS	930	1139	.	-	0	ID=cds-WP_001298565.1;Parent=gene-AC56_RS22530;Dbxref=GenBank:WP_001298565.1;Name=WP_001298565.1;gbkey=CDS;gene=hha;inference=COORDINATES: similar to AA sequence:RefSeq:NP_958726.1;locus_tag=AC56_RS22530;product=hemolysin expression modulator Hha;protein_id=WP_001298565.1;transl_table=11
NZ_JJLS01000077.1	RefSeq	gene	1185	1646	.	-	.	ID=gene-AC56_RS22525;Name=AC56_RS22525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22525;old_locus_tag=AC56_5405
NZ_JJLS01000077.1	Protein Homology	CDS	1185	1646	.	-	0	ID=cds-WP_001233838.1;Parent=gene-AC56_RS22525;Dbxref=GenBank:WP_001233838.1;Name=WP_001233838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052672.1;locus_tag=AC56_RS22525;product=thermonuclease family protein;protein_id=WP_001233838.1;transl_table=11
NZ_JJLS01000077.1	RefSeq	gene	1892	2104	.	-	.	ID=gene-AC56_RS22520;Name=AC56_RS22520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22520;old_locus_tag=AC56_5406
NZ_JJLS01000077.1	Protein Homology	CDS	1892	2104	.	-	0	ID=cds-WP_032282516.1;Parent=gene-AC56_RS22520;Dbxref=GenBank:WP_032282516.1;Name=WP_032282516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858385.1;locus_tag=AC56_RS22520;product=ANR family transcriptional regulator;protein_id=WP_032282516.1;transl_table=11
NZ_JJLS01000077.1	RefSeq	gene	2236	2796	.	-	.	ID=gene-AC56_RS22515;Name=AC56_RS22515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22515;old_locus_tag=AC56_5407
NZ_JJLS01000077.1	Protein Homology	CDS	2236	2796	.	-	0	ID=cds-WP_000139325.1;Parent=gene-AC56_RS22515;Dbxref=GenBank:WP_000139325.1;Name=WP_000139325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052671.1;locus_tag=AC56_RS22515;product=fertility inhibition protein FinO;protein_id=WP_000139325.1;transl_table=11
NZ_JJLS01000077.1	RefSeq	gene	2851	3597	.	-	.	ID=gene-AC56_RS22510;Name=traX;gbkey=Gene;gene=traX;gene_biotype=protein_coding;locus_tag=AC56_RS22510;old_locus_tag=AC56_5408
NZ_JJLS01000077.1	Protein Homology	CDS	2851	3597	.	-	0	ID=cds-WP_032277634.1;Parent=gene-AC56_RS22510;Dbxref=GenBank:WP_032277634.1;Name=WP_032277634.1;gbkey=CDS;gene=traX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858383.2;locus_tag=AC56_RS22510;product=conjugal transfer pilus acetylase TraX;protein_id=WP_032277634.1;transl_table=11
NZ_JJLS01000077.1	RefSeq	pseudogene	3617	5563	.	-	.	ID=gene-AC56_RS22505;Name=AC56_RS22505;end_range=5563,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS22505;old_locus_tag=AC56_5409;partial=true;pseudo=true
NZ_JJLS01000077.1	Protein Homology	CDS	3617	5563	.	-	0	ID=cds-AC56_RS22505;Parent=gene-AC56_RS22505;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0003677,GO:0003678,GO:0005524,GO:0016818;end_range=5563,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490592.1;locus_tag=AC56_RS22505;partial=true;product=conjugative transfer relaxase/helicase TraI domain-containing protein;pseudo=true;transl_table=11
NZ_JJLS01000077.1	RefSeq	pseudogene	5740	6363	.	+	.	ID=gene-AC56_RS0124785;Name=AC56_RS0124785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0124785;pseudo=true
NZ_JJLS01000077.1	Protein Homology	CDS	5740	6363	.	+	0	ID=cds-AC56_RS0124785;Parent=gene-AC56_RS0124785;Note=internal stop;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000904945.1;locus_tag=AC56_RS0124785;product=recombinase family protein;pseudo=true;transl_table=11
NZ_JJLS01000077.1	RefSeq	pseudogene	6344	9295	.	+	.	ID=gene-AC56_RS33660;Name=AC56_RS33660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33660;pseudo=true
NZ_JJLS01000077.1	Protein Homology	CDS	6344	9295	.	+	0	ID=cds-AC56_RS33660;Parent=gene-AC56_RS33660;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000008826.1;locus_tag=AC56_RS33660;product=Tn3 family transposase;pseudo=true;transl_table=11
NZ_JJLS01000077.1	RefSeq	pseudogene	9331	10206	.	-	.	ID=gene-AC56_RS22500;Name=AC56_RS22500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS22500;old_locus_tag=AC56_5413;partial=true;pseudo=true;start_range=.,9331
NZ_JJLS01000077.1	Protein Homology	CDS	9331	10206	.	-	0	ID=cds-AC56_RS22500;Parent=gene-AC56_RS22500;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS22500;partial=true;product=IS5-like element ISKpn26 family transposase;pseudo=true;start_range=.,9331;transl_table=11
NZ_JJLS01000077.1	RefSeq	gene	10345	10680	.	-	.	ID=gene-AC56_RS0124805;Name=AC56_RS0124805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0124805
NZ_JJLS01000077.1	Protein Homology	CDS	10345	10680	.	-	0	ID=cds-WP_282953770.1;Parent=gene-AC56_RS0124805;Dbxref=GenBank:WP_282953770.1;Name=WP_282953770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016231353.1;locus_tag=AC56_RS0124805;product=cholera enterotoxin subunit B;protein_id=WP_282953770.1;transl_table=11
NZ_JJLS01000077.1	RefSeq	gene	10770	11627	.	-	.	ID=gene-AC56_RS28410;Name=AC56_RS28410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS28410;old_locus_tag=AC56_5414
NZ_JJLS01000077.1	Protein Homology	CDS	10770	11627	.	-	0	ID=cds-WP_071999469.1;Parent=gene-AC56_RS28410;Dbxref=GenBank:WP_071999469.1;Name=WP_071999469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016231354.1;locus_tag=AC56_RS28410;product=zinc-dependent metalloprotease;protein_id=WP_071999469.1;transl_table=11
NZ_JJLS01000077.1	RefSeq	pseudogene	12239	12564	.	+	.	ID=gene-AC56_RS0124810;Name=AC56_RS0124810;end_range=12564,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0124810;partial=true;pseudo=true;start_range=.,12239
NZ_JJLS01000077.1	Protein Homology	CDS	12239	12564	.	+	0	ID=cds-AC56_RS0124810;Parent=gene-AC56_RS0124810;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0005524;end_range=12564,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000544830.1;locus_tag=AC56_RS0124810;partial=true;product=ATP-binding protein;pseudo=true;start_range=.,12239;transl_table=11
NZ_JJLS01000077.1	RefSeq	gene	12917	14066	.	-	.	ID=gene-AC56_RS22495;Name=tnpC;end_range=14066,.;gbkey=Gene;gene=tnpC;gene_biotype=protein_coding;locus_tag=AC56_RS22495;old_locus_tag=AC56_5417;partial=true
NZ_JJLS01000077.1	Protein Homology	CDS	12917	14066	.	-	1	ID=cds-WP_032282517.1;Parent=gene-AC56_RS22495;Dbxref=GenBank:WP_032282517.1;Name=WP_032282517.1;Ontology_term=GO:0004803;end_range=14066,.;gbkey=CDS;gene=tnpC;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000998048.1;locus_tag=AC56_RS22495;partial=true;product=IS66 family transposase;protein_id=WP_032282517.1;transl_table=11
##sequence-region NZ_JJLS01000078.1 1 2047
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000078.1	RefSeq	region	1	2047	.	+	.	ID=NZ_JJLS01000078.1:1..2047;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000078.1	RefSeq	gene	1	859	.	-	.	ID=gene-AC56_RS22490;Name=AC56_RS22490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22490;old_locus_tag=AC56_5418;partial=true;start_range=.,1
NZ_JJLS01000078.1	Protein Homology	CDS	1	859	.	-	0	ID=cds-WP_032189176.1;Parent=gene-AC56_RS22490;Dbxref=GenBank:WP_032189176.1;Name=WP_032189176.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203687.1;locus_tag=AC56_RS22490;partial=true;product=phosphoenolpyruvate carboxylase;protein_id=WP_032189176.1;start_range=.,1;transl_table=11
NZ_JJLS01000078.1	RefSeq	gene	1334	2047	.	-	.	ID=gene-AC56_RS22485;Name=argE;end_range=2047,.;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=AC56_RS22485;old_locus_tag=AC56_5419;partial=true
NZ_JJLS01000078.1	Protein Homology	CDS	1334	2047	.	-	0	ID=cds-WP_032189461.1;Parent=gene-AC56_RS22485;Dbxref=GenBank:WP_032189461.1;Name=WP_032189461.1;Ontology_term=GO:0006526,GO:0006592,GO:0008777;end_range=2047,.;gbkey=CDS;gene=argE;go_function=acetylornithine deacetylase activity|0008777||IEA;go_process=L-arginine biosynthetic process|0006526||IEA,ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418392.1;locus_tag=AC56_RS22485;partial=true;product=acetylornithine deacetylase;protein_id=WP_032189461.1;transl_table=11
##sequence-region NZ_JJLS01000079.1 1 13575
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000079.1	RefSeq	region	1	13575	.	+	.	ID=NZ_JJLS01000079.1:1..13575;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000079.1	RefSeq	gene	1	860	.	+	.	ID=gene-AC56_RS28420;Name=AC56_RS28420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS28420;old_locus_tag=AC56_5420;partial=true;start_range=.,1
NZ_JJLS01000079.1	Protein Homology	CDS	1	860	.	+	2	ID=cds-WP_032282508.1-2;Parent=gene-AC56_RS28420;Dbxref=GenBank:WP_032282508.1;Name=WP_032282508.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AC56_RS28420;partial=true;product=IS3 family transposase;protein_id=WP_032282508.1;start_range=.,1;transl_table=11
NZ_JJLS01000079.1	RefSeq	pseudogene	903	1242	.	-	.	ID=gene-AC56_RS22475;Name=AC56_RS22475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS22475;old_locus_tag=AC56_5421;partial=true;pseudo=true;start_range=.,903
NZ_JJLS01000079.1	Protein Homology	CDS	903	1242	.	-	0	ID=cds-AC56_RS22475;Parent=gene-AC56_RS22475;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001347735.1;locus_tag=AC56_RS22475;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,903;transl_table=11
NZ_JJLS01000079.1	RefSeq	gene	1558	2202	.	-	.	ID=gene-AC56_RS22470;Name=AC56_RS22470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22470;old_locus_tag=AC56_5422
NZ_JJLS01000079.1	Protein Homology	CDS	1558	2202	.	-	0	ID=cds-WP_001333354.1;Parent=gene-AC56_RS22470;Dbxref=GenBank:WP_001333354.1;Name=WP_001333354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309416.1;locus_tag=AC56_RS22470;product=hypothetical protein;protein_id=WP_001333354.1;transl_table=11
NZ_JJLS01000079.1	RefSeq	gene	2223	2492	.	-	.	ID=gene-AC56_RS22465;Name=AC56_RS22465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22465;old_locus_tag=AC56_5423
NZ_JJLS01000079.1	Protein Homology	CDS	2223	2492	.	-	0	ID=cds-WP_000226519.1;Parent=gene-AC56_RS22465;Dbxref=GenBank:WP_000226519.1;Name=WP_000226519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309415.1;locus_tag=AC56_RS22465;product=PerC family transcriptional regulator;protein_id=WP_000226519.1;transl_table=11
NZ_JJLS01000079.1	RefSeq	gene	2571	3209	.	-	.	ID=gene-AC56_RS0124815;Name=AC56_RS0124815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0124815;old_locus_tag=AC56_5424
NZ_JJLS01000079.1	Protein Homology	CDS	2571	3209	.	-	0	ID=cds-WP_000502842.1;Parent=gene-AC56_RS0124815;Dbxref=GenBank:WP_000502842.1;Name=WP_000502842.1;Ontology_term=GO:0071453,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cellular response to oxygen levels|0071453||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309414.1;locus_tag=AC56_RS0124815;product=IbrB-like domain-containing protein;protein_id=WP_000502842.1;transl_table=11
NZ_JJLS01000079.1	RefSeq	gene	3194	4426	.	-	.	ID=gene-AC56_RS22460;Name=AC56_RS22460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22460;old_locus_tag=AC56_5425
NZ_JJLS01000079.1	Protein Homology	CDS	3194	4426	.	-	0	ID=cds-WP_001285507.1;Parent=gene-AC56_RS22460;Dbxref=GenBank:WP_001285507.1;Name=WP_001285507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309413.1;locus_tag=AC56_RS22460;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_001285507.1;transl_table=11
NZ_JJLS01000079.1	RefSeq	gene	4927	7608	.	-	.	ID=gene-AC56_RS22455;Name=AC56_RS22455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22455;old_locus_tag=AC56_5426
NZ_JJLS01000079.1	Protein Homology	CDS	4927	7608	.	-	0	ID=cds-WP_023149608.1;Parent=gene-AC56_RS22455;Dbxref=GenBank:WP_023149608.1;Name=WP_023149608.1;Ontology_term=GO:0004386;gbkey=CDS;go_function=helicase activity|0004386||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536548.1;locus_tag=AC56_RS22455;product=AAA domain-containing protein;protein_id=WP_023149608.1;transl_table=11
NZ_JJLS01000079.1	RefSeq	gene	7849	8895	.	-	.	ID=gene-AC56_RS22450;Name=AC56_RS22450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22450;old_locus_tag=AC56_5427
NZ_JJLS01000079.1	Protein Homology	CDS	7849	8895	.	-	0	ID=cds-WP_001345400.1;Parent=gene-AC56_RS22450;Dbxref=GenBank:WP_001345400.1;Name=WP_001345400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309409.2;locus_tag=AC56_RS22450;product=POTRA domain-containing protein;protein_id=WP_001345400.1;transl_table=11
NZ_JJLS01000079.1	RefSeq	gene	9570	9761	.	+	.	ID=gene-AC56_RS22445;Name=AC56_RS22445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22445;old_locus_tag=AC56_5429
NZ_JJLS01000079.1	Protein Homology	CDS	9570	9761	.	+	0	ID=cds-WP_001287881.1;Parent=gene-AC56_RS22445;Dbxref=GenBank:WP_001287881.1;Name=WP_001287881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502604.1;locus_tag=AC56_RS22445;product=DUF4222 domain-containing protein;protein_id=WP_001287881.1;transl_table=11
NZ_JJLS01000079.1	RefSeq	gene	9814	10047	.	-	.	ID=gene-AC56_RS22440;Name=AC56_RS22440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22440;old_locus_tag=AC56_5430
NZ_JJLS01000079.1	Protein Homology	CDS	9814	10047	.	-	0	ID=cds-WP_000124179.1;Parent=gene-AC56_RS22440;Dbxref=GenBank:WP_000124179.1;Name=WP_000124179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309405.1;locus_tag=AC56_RS22440;product=hypothetical protein;protein_id=WP_000124179.1;transl_table=11
NZ_JJLS01000079.1	RefSeq	gene	10143	10766	.	-	.	ID=gene-AC56_RS0124825;Name=AC56_RS0124825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0124825;old_locus_tag=AC56_5431
NZ_JJLS01000079.1	Protein Homology	CDS	10143	10766	.	-	0	ID=cds-WP_001260386.1;Parent=gene-AC56_RS0124825;Dbxref=GenBank:WP_001260386.1;Name=WP_001260386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309404.1;locus_tag=AC56_RS0124825;product=hypothetical protein;protein_id=WP_001260386.1;transl_table=11
NZ_JJLS01000079.1	RefSeq	gene	10855	11364	.	-	.	ID=gene-AC56_RS30925;Name=AC56_RS30925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS30925
NZ_JJLS01000079.1	Protein Homology	CDS	10855	11364	.	-	0	ID=cds-WP_023153739.1;Parent=gene-AC56_RS30925;Dbxref=GenBank:WP_023153739.1;Name=WP_023153739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309403.1;locus_tag=AC56_RS30925;product=hypothetical protein;protein_id=WP_023153739.1;transl_table=11
NZ_JJLS01000079.1	RefSeq	gene	11822	12280	.	+	.	ID=gene-AC56_RS22435;Name=AC56_RS22435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22435;old_locus_tag=AC56_5434
NZ_JJLS01000079.1	Protein Homology	CDS	11822	12280	.	+	0	ID=cds-WP_001301456.1;Parent=gene-AC56_RS22435;Dbxref=GenBank:WP_001301456.1;Name=WP_001301456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309401.1;locus_tag=AC56_RS22435;product=hypothetical protein;protein_id=WP_001301456.1;transl_table=11
NZ_JJLS01000079.1	RefSeq	pseudogene	12380	12462	.	+	.	ID=gene-AC56_RS33860;Name=AC56_RS33860;end_range=12462,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33860;partial=true;pseudo=true
NZ_JJLS01000079.1	Protein Homology	CDS	12380	12462	.	+	0	ID=cds-AC56_RS33860;Parent=gene-AC56_RS33860;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=12462,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000406625.1;locus_tag=AC56_RS33860;partial=true;product=CPBP family intramembrane glutamic endopeptidase;pseudo=true;transl_table=11
NZ_JJLS01000079.1	RefSeq	gene	12518	13215	.	+	.	ID=gene-AC56_RS22430;Name=AC56_RS22430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22430;old_locus_tag=AC56_5435
NZ_JJLS01000079.1	Protein Homology	CDS	12518	12767	.	+	0	ID=cds-WP_248790144.1;Parent=gene-AC56_RS22430;Dbxref=GenBank:WP_248790144.1;Name=WP_248790144.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558153.1;locus_tag=AC56_RS22430;product=IS1 family transposase;protein_id=WP_248790144.1;transl_table=11
NZ_JJLS01000079.1	Protein Homology	CDS	12767	13215	.	+	2	ID=cds-WP_248790144.1;Parent=gene-AC56_RS22430;Dbxref=GenBank:WP_248790144.1;Name=WP_248790144.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558153.1;locus_tag=AC56_RS22430;product=IS1 family transposase;protein_id=WP_248790144.1;transl_table=11
NZ_JJLS01000079.1	RefSeq	pseudogene	13226	13297	.	-	.	ID=gene-AC56_RS33665;Name=AC56_RS33665;end_range=13297,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33665;partial=true;pseudo=true
NZ_JJLS01000079.1	Protein Homology	CDS	13226	13297	.	-	0	ID=cds-AC56_RS33665;Parent=gene-AC56_RS33665;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=13297,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013446.6;locus_tag=AC56_RS33665;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_JJLS01000079.1	RefSeq	pseudogene	13335	13575	.	+	.	ID=gene-AC56_RS32920;Name=AC56_RS32920;end_range=13575,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS32920;partial=true;pseudo=true
NZ_JJLS01000079.1	Protein Homology	CDS	13335	13575	.	+	0	ID=cds-AC56_RS32920;Parent=gene-AC56_RS32920;Note=frameshifted%3B internal stop%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=13575,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AC56_RS32920;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000080.1 1 1906
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000080.1	RefSeq	region	1	1906	.	+	.	ID=NZ_JJLS01000080.1:1..1906;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000080.1	RefSeq	pseudogene	1	407	.	-	.	ID=gene-AC56_RS22425;Name=AC56_RS22425;end_range=407,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS22425;old_locus_tag=AC56_5436;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000080.1	Protein Homology	CDS	1	407	.	-	0	ID=cds-AC56_RS22425;Parent=gene-AC56_RS22425;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0015074;end_range=407,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611483.1;locus_tag=AC56_RS22425;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000080.1	RefSeq	gene	474	1630	.	+	.	ID=gene-AC56_RS22415;Name=AC56_RS22415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22415;old_locus_tag=AC56_5438
NZ_JJLS01000080.1	Protein Homology	CDS	474	723	.	+	0	ID=cds-WP_085947616.1;Parent=gene-AC56_RS22415;Dbxref=GenBank:WP_085947616.1;Name=WP_085947616.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611998.1;locus_tag=AC56_RS22415;product=IS3-like element IS600 family transposase;protein_id=WP_085947616.1;transl_table=11
NZ_JJLS01000080.1	Protein Homology	CDS	723	1630	.	+	2	ID=cds-WP_085947616.1;Parent=gene-AC56_RS22415;Dbxref=GenBank:WP_085947616.1;Name=WP_085947616.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611998.1;locus_tag=AC56_RS22415;product=IS3-like element IS600 family transposase;protein_id=WP_085947616.1;transl_table=11
##sequence-region NZ_JJLS01000081.1 1 1035
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000081.1	RefSeq	region	1	1035	.	+	.	ID=NZ_JJLS01000081.1:1..1035;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000081.1	RefSeq	gene	1	315	.	+	.	ID=gene-AC56_RS22410;Name=AC56_RS22410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22410;old_locus_tag=AC56_5440;partial=true;start_range=.,1
NZ_JJLS01000081.1	Protein Homology	CDS	1	315	.	+	0	ID=cds-WP_032282511.1-2;Parent=gene-AC56_RS22410;Dbxref=GenBank:WP_032282511.1;Name=WP_032282511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416904.1;locus_tag=AC56_RS22410;partial=true;product=LysR substrate-binding domain-containing protein;protein_id=WP_032282511.1;start_range=.,1;transl_table=11
NZ_JJLS01000081.1	RefSeq	gene	306	647	.	-	.	ID=gene-AC56_RS22405;Name=AC56_RS22405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22405;old_locus_tag=AC56_5441
NZ_JJLS01000081.1	Protein Homology	CDS	306	647	.	-	0	ID=cds-WP_000201405.1-2;Parent=gene-AC56_RS22405;Dbxref=GenBank:WP_000201405.1;Name=WP_000201405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708263.1;locus_tag=AC56_RS22405;product=FlxA-like family protein;protein_id=WP_000201405.1;transl_table=11
NZ_JJLS01000081.1	RefSeq	gene	767	842	.	-	.	ID=gene-AC56_RS22400;Name=AC56_RS22400;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS22400;old_locus_tag=AC56_5442
NZ_JJLS01000081.1	tRNAscan-SE	tRNA	767	842	.	-	.	ID=rna-AC56_RS22400;Parent=gene-AC56_RS22400;anticodon=(pos:complement(807..809));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS22400;product=tRNA-Lys
NZ_JJLS01000081.1	tRNAscan-SE	exon	767	842	.	-	.	ID=exon-AC56_RS22400-1;Parent=rna-AC56_RS22400;anticodon=(pos:complement(807..809));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS22400;product=tRNA-Lys
NZ_JJLS01000081.1	RefSeq	gene	847	922	.	-	.	ID=gene-AC56_RS22395;Name=AC56_RS22395;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS22395;old_locus_tag=AC56_5443
NZ_JJLS01000081.1	tRNAscan-SE	tRNA	847	922	.	-	.	ID=rna-AC56_RS22395;Parent=gene-AC56_RS22395;anticodon=(pos:complement(887..889));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS22395;product=tRNA-Val
NZ_JJLS01000081.1	tRNAscan-SE	exon	847	922	.	-	.	ID=exon-AC56_RS22395-1;Parent=rna-AC56_RS22395;anticodon=(pos:complement(887..889));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS22395;product=tRNA-Val
##sequence-region NZ_JJLS01000082.1 1 11977
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000082.1	RefSeq	region	1	11977	.	+	.	ID=NZ_JJLS01000082.1:1..11977;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000082.1	RefSeq	pseudogene	1	412	.	+	.	ID=gene-AC56_RS22390;Name=AC56_RS22390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS22390;old_locus_tag=AC56_5445;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000082.1	Protein Homology	CDS	1	412	.	+	1	ID=cds-AC56_RS22390;Parent=gene-AC56_RS22390;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS22390;partial=true;product=IS5-like element IS903B family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000082.1	RefSeq	pseudogene	459	581	.	-	.	ID=gene-AC56_RS0124845;Name=AC56_RS0124845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0124845;partial=true;pseudo=true;start_range=.,459
NZ_JJLS01000082.1	Protein Homology	CDS	459	581	.	-	0	ID=cds-AC56_RS0124845;Parent=gene-AC56_RS0124845;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001098999.1;locus_tag=AC56_RS0124845;partial=true;product=type IV conjugative transfer system pilin TraA;pseudo=true;start_range=.,459;transl_table=11
NZ_JJLS01000082.1	RefSeq	gene	614	1009	.	-	.	ID=gene-AC56_RS0124850;Name=traY;gbkey=Gene;gene=traY;gene_biotype=protein_coding;locus_tag=AC56_RS0124850
NZ_JJLS01000082.1	Protein Homology	CDS	614	1009	.	-	0	ID=cds-WP_001309237.1;Parent=gene-AC56_RS0124850;Dbxref=GenBank:WP_001309237.1;Name=WP_001309237.1;Ontology_term=GO:0003677;gbkey=CDS;gene=traY;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001366159.1;locus_tag=AC56_RS0124850;product=conjugal transfer relaxosome DNA-bindin protein TraY;protein_id=WP_001309237.1;transl_table=11
NZ_JJLS01000082.1	RefSeq	gene	1108	1797	.	-	.	ID=gene-AC56_RS22385;Name=traJ;gbkey=Gene;gene=traJ;gene_biotype=protein_coding;locus_tag=AC56_RS22385;old_locus_tag=AC56_5447
NZ_JJLS01000082.1	Protein Homology	CDS	1108	1797	.	-	0	ID=cds-WP_032173224.1;Parent=gene-AC56_RS22385;Dbxref=GenBank:WP_032173224.1;Name=WP_032173224.1;gbkey=CDS;gene=traJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003979562.1;locus_tag=AC56_RS22385;product=conjugal transfer transcriptional regulator TraJ;protein_id=WP_032173224.1;transl_table=11
NZ_JJLS01000082.1	RefSeq	gene	1984	2367	.	-	.	ID=gene-AC56_RS22380;Name=traM;gbkey=Gene;gene=traM;gene_biotype=protein_coding;locus_tag=AC56_RS22380;old_locus_tag=AC56_5448
NZ_JJLS01000082.1	Protein Homology	CDS	1984	2367	.	-	0	ID=cds-WP_001151538.1;Parent=gene-AC56_RS22380;Dbxref=GenBank:WP_001151538.1;Name=WP_001151538.1;Ontology_term=GO:0003677;gbkey=CDS;gene=traM;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151541.1;locus_tag=AC56_RS22380;product=conjugal transfer relaxosome DNA-binding protein TraM;protein_id=WP_001151538.1;transl_table=11
NZ_JJLS01000082.1	RefSeq	gene	2688	3290	.	+	.	ID=gene-AC56_RS22375;Name=AC56_RS22375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22375;old_locus_tag=AC56_5449
NZ_JJLS01000082.1	Protein Homology	CDS	2688	3290	.	+	0	ID=cds-WP_072205450.1;Parent=gene-AC56_RS22375;Dbxref=GenBank:WP_072205450.1;Name=WP_072205450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000243715.1;locus_tag=AC56_RS22375;product=transglycosylase SLT domain-containing protein;protein_id=WP_072205450.1;transl_table=11
NZ_JJLS01000082.1	RefSeq	gene	3586	4407	.	-	.	ID=gene-AC56_RS22370;Name=AC56_RS22370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22370;old_locus_tag=AC56_5450
NZ_JJLS01000082.1	Protein Homology	CDS	3586	4407	.	-	0	ID=cds-WP_001234437.1;Parent=gene-AC56_RS22370;Dbxref=GenBank:WP_001234437.1;Name=WP_001234437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001234456.1;locus_tag=AC56_RS22370;product=DUF932 domain-containing protein;protein_id=WP_001234437.1;transl_table=11
NZ_JJLS01000082.1	RefSeq	gene	4518	4814	.	-	.	ID=gene-AC56_RS22365;Name=AC56_RS22365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22365;old_locus_tag=AC56_5451
NZ_JJLS01000082.1	Protein Homology	CDS	4518	4814	.	-	0	ID=cds-WP_001272251.1;Parent=gene-AC56_RS22365;Dbxref=GenBank:WP_001272251.1;Name=WP_001272251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001545326.1;locus_tag=AC56_RS22365;product=hypothetical protein;protein_id=WP_001272251.1;transl_table=11
NZ_JJLS01000082.1	RefSeq	pseudogene	4838	5043	.	-	.	ID=gene-AC56_RS33865;Name=AC56_RS33865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33865;pseudo=true
NZ_JJLS01000082.1	Protein Homology	CDS	4838	5043	.	-	0	ID=cds-AC56_RS33865;Parent=gene-AC56_RS33865;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000547968.1;locus_tag=AC56_RS33865;product=single-stranded DNA-binding protein;pseudo=true;transl_table=11
NZ_JJLS01000082.1	RefSeq	pseudogene	5114	5426	.	+	.	ID=gene-AC56_RS32925;Name=AC56_RS32925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS32925;pseudo=true
NZ_JJLS01000082.1	Protein Homology	CDS	5114	5426	.	+	0	ID=cds-AC56_RS32925;Parent=gene-AC56_RS32925;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001310283.1;locus_tag=AC56_RS32925;product=hypothetical protein;pseudo=true;transl_table=11
NZ_JJLS01000082.1	RefSeq	gene	5664	5786	.	-	.	ID=gene-AC56_RS0124870;Name=AC56_RS0124870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0124870
NZ_JJLS01000082.1	Protein Homology	CDS	5664	5786	.	-	0	ID=cds-WP_223195199.1;Parent=gene-AC56_RS0124870;Dbxref=GenBank:WP_223195199.1;Name=WP_223195199.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004118124.1;locus_tag=AC56_RS0124870;product=Hok/Gef family protein;protein_id=WP_223195199.1;transl_table=11
NZ_JJLS01000082.1	RefSeq	pseudogene	5731	5883	.	-	.	ID=gene-AC56_RS33140;Name=AC56_RS33140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33140;partial=true;pseudo=true;start_range=.,5731
NZ_JJLS01000082.1	Protein Homology	CDS	5731	5883	.	-	0	ID=cds-AC56_RS33140;Parent=gene-AC56_RS33140;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF010277.0;locus_tag=AC56_RS33140;partial=true;product=DUF5431 family protein;pseudo=true;start_range=.,5731;transl_table=11
NZ_JJLS01000082.1	RefSeq	gene	6034	6348	.	-	.	ID=gene-AC56_RS22360;Name=AC56_RS22360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22360;old_locus_tag=AC56_5453
NZ_JJLS01000082.1	Protein Homology	CDS	6034	6348	.	-	0	ID=cds-WP_001562885.1;Parent=gene-AC56_RS22360;Dbxref=GenBank:WP_001562885.1;Name=WP_001562885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001562885.1;locus_tag=AC56_RS22360;product=hypothetical protein;protein_id=WP_001562885.1;transl_table=11
NZ_JJLS01000082.1	RefSeq	gene	6345	7064	.	-	.	ID=gene-AC56_RS22355;Name=AC56_RS22355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22355;old_locus_tag=AC56_5454
NZ_JJLS01000082.1	Protein Homology	CDS	6345	7064	.	-	0	ID=cds-WP_032251632.1;Parent=gene-AC56_RS22355;Dbxref=GenBank:WP_032251632.1;Name=WP_032251632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001763821.1;locus_tag=AC56_RS22355;product=plasmid SOS inhibition protein A;protein_id=WP_032251632.1;transl_table=11
NZ_JJLS01000082.1	RefSeq	gene	7061	7495	.	-	.	ID=gene-AC56_RS22350;Name=psiB;gbkey=Gene;gene=psiB;gene_biotype=protein_coding;locus_tag=AC56_RS22350;old_locus_tag=AC56_5455
NZ_JJLS01000082.1	Protein Homology	CDS	7061	7495	.	-	0	ID=cds-WP_032277766.1;Parent=gene-AC56_RS22350;Dbxref=GenBank:WP_032277766.1;Name=WP_032277766.1;gbkey=CDS;gene=psiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000845953.1;locus_tag=AC56_RS22350;product=conjugation system SOS inhibitor PsiB;protein_id=WP_032277766.1;transl_table=11
NZ_JJLS01000082.1	RefSeq	gene	7550	9508	.	-	.	ID=gene-AC56_RS22345;Name=AC56_RS22345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22345;old_locus_tag=AC56_5456
NZ_JJLS01000082.1	Protein Homology	CDS	7550	9508	.	-	0	ID=cds-WP_032277767.1;Parent=gene-AC56_RS22345;Dbxref=GenBank:WP_032277767.1;Name=WP_032277767.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000117326.1;locus_tag=AC56_RS22345;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_032277767.1;transl_table=11
NZ_JJLS01000082.1	RefSeq	gene	9567	9800	.	-	.	ID=gene-AC56_RS22340;Name=AC56_RS22340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22340;old_locus_tag=AC56_5457
NZ_JJLS01000082.1	Protein Homology	CDS	9567	9800	.	-	0	ID=cds-WP_000006021.1;Parent=gene-AC56_RS22340;Dbxref=GenBank:WP_000006021.1;Name=WP_000006021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_958724.1;locus_tag=AC56_RS22340;product=DUF905 domain-containing protein;protein_id=WP_000006021.1;transl_table=11
NZ_JJLS01000082.1	RefSeq	gene	9858	10385	.	-	.	ID=gene-AC56_RS22335;Name=AC56_RS22335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22335;old_locus_tag=AC56_5458
NZ_JJLS01000082.1	Protein Homology	CDS	9858	10385	.	-	0	ID=cds-WP_001528584.1;Parent=gene-AC56_RS22335;Dbxref=GenBank:WP_001528584.1;Name=WP_001528584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052656.1;locus_tag=AC56_RS22335;product=single-stranded DNA-binding protein;protein_id=WP_001528584.1;transl_table=11
NZ_JJLS01000082.1	RefSeq	pseudogene	10411	10616	.	-	.	ID=gene-AC56_RS33870;Name=AC56_RS33870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33870;pseudo=true
NZ_JJLS01000082.1	Protein Homology	CDS	10411	10616	.	-	0	ID=cds-AC56_RS33870;Parent=gene-AC56_RS33870;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000547968.1;locus_tag=AC56_RS33870;product=single-stranded DNA-binding protein;pseudo=true;transl_table=11
NZ_JJLS01000082.1	RefSeq	pseudogene	10687	10860	.	+	.	ID=gene-AC56_RS33145;Name=AC56_RS33145;end_range=10860,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33145;partial=true;pseudo=true
NZ_JJLS01000082.1	Protein Homology	CDS	10687	10860	.	+	0	ID=cds-AC56_RS33145;Parent=gene-AC56_RS33145;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=10860,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052655.1;locus_tag=AC56_RS33145;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_JJLS01000082.1	RefSeq	gene	11680	11977	.	-	.	ID=gene-AC56_RS22330;Name=AC56_RS22330;end_range=11977,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22330;old_locus_tag=AC56_5460;partial=true
NZ_JJLS01000082.1	Protein Homology	CDS	11680	11977	.	-	1	ID=cds-WP_021557606.1;Parent=gene-AC56_RS22330;Dbxref=GenBank:WP_021557606.1;Name=WP_021557606.1;end_range=11977,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS22330;partial=true;product=IS4 family transposase;protein_id=WP_021557606.1;transl_table=11
##sequence-region NZ_JJLS01000083.1 1 2049
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000083.1	RefSeq	region	1	2049	.	+	.	ID=NZ_JJLS01000083.1:1..2049;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000083.1	RefSeq	gene	44	1519	.	-	.	ID=gene-AC56_RS22325;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=AC56_RS22325;old_locus_tag=AC56_5461
NZ_JJLS01000083.1	Protein Homology	CDS	44	1519	.	-	0	ID=cds-WP_000024939.1;Parent=gene-AC56_RS22325;Dbxref=GenBank:WP_000024939.1;Name=WP_000024939.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=AC56_RS22325;product=ketol-acid reductoisomerase;protein_id=WP_000024939.1;transl_table=11
NZ_JJLS01000083.1	RefSeq	gene	1669	2049	.	+	.	ID=gene-AC56_RS22320;Name=AC56_RS22320;end_range=2049,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22320;old_locus_tag=AC56_5462;partial=true
NZ_JJLS01000083.1	Protein Homology	CDS	1669	2049	.	+	0	ID=cds-WP_032189774.1;Parent=gene-AC56_RS22320;Dbxref=GenBank:WP_032189774.1;Name=WP_032189774.1;Ontology_term=GO:0006355,GO:0003700;end_range=2049,.;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312734.1;locus_tag=AC56_RS22320;partial=true;product=LysR family transcriptional regulator;protein_id=WP_032189774.1;transl_table=11
##sequence-region NZ_JJLS01000084.1 1 11675
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000084.1	RefSeq	region	1	11675	.	+	.	ID=NZ_JJLS01000084.1:1..11675;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000084.1	RefSeq	pseudogene	1	156	.	+	.	ID=gene-AC56_RS30935;Name=AC56_RS30935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS30935;old_locus_tag=AC56_5463;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000084.1	Protein Homology	CDS	1	156	.	+	0	ID=cds-AC56_RS30935;Parent=gene-AC56_RS30935;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS30935;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000084.1	RefSeq	gene	138	341	.	+	.	ID=gene-AC56_RS33670;Name=AC56_RS33670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33670
NZ_JJLS01000084.1	Protein Homology	CDS	138	341	.	+	0	ID=cds-WP_349236771.1;Parent=gene-AC56_RS33670;Dbxref=GenBank:WP_349236771.1;Name=WP_349236771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001341121.1;locus_tag=AC56_RS33670;product=hypothetical protein;protein_id=WP_349236771.1;transl_table=11
NZ_JJLS01000084.1	RefSeq	gene	387	596	.	+	.	ID=gene-AC56_RS0124890;Name=AC56_RS0124890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0124890
NZ_JJLS01000084.1	Protein Homology	CDS	387	596	.	+	0	ID=cds-WP_000874156.1;Parent=gene-AC56_RS0124890;Dbxref=GenBank:WP_000874156.1;Name=WP_000874156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000874156.1;locus_tag=AC56_RS0124890;product=hypothetical protein;protein_id=WP_000874156.1;transl_table=11
NZ_JJLS01000084.1	RefSeq	gene	707	1558	.	+	.	ID=gene-AC56_RS22310;Name=AC56_RS22310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22310;old_locus_tag=AC56_5465
NZ_JJLS01000084.1	Protein Homology	CDS	707	1558	.	+	0	ID=cds-WP_000611664.1;Parent=gene-AC56_RS22310;Dbxref=GenBank:WP_000611664.1;Name=WP_000611664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000611663.1;locus_tag=AC56_RS22310;product=phage repressor protein C1;protein_id=WP_000611664.1;transl_table=11
NZ_JJLS01000084.1	RefSeq	gene	1591	2703	.	-	.	ID=gene-AC56_RS22305;Name=AC56_RS22305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22305;old_locus_tag=AC56_5466
NZ_JJLS01000084.1	Protein Homology	CDS	1591	2703	.	-	0	ID=cds-WP_001260610.1;Parent=gene-AC56_RS22305;Dbxref=GenBank:WP_001260610.1;Name=WP_001260610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001260625.1;locus_tag=AC56_RS22305;product=phage antirepressor Ant;protein_id=WP_001260610.1;transl_table=11
NZ_JJLS01000084.1	RefSeq	gene	2700	2921	.	-	.	ID=gene-AC56_RS33150;Name=AC56_RS33150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33150
NZ_JJLS01000084.1	Protein Homology	CDS	2700	2921	.	-	0	ID=cds-WP_071998989.1;Parent=gene-AC56_RS33150;Dbxref=GenBank:WP_071998989.1;Name=WP_071998989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001515201.1;locus_tag=AC56_RS33150;product=host cell division inhibitor Icd-like protein;protein_id=WP_071998989.1;transl_table=11
NZ_JJLS01000084.1	RefSeq	gene	2940	3059	.	-	.	ID=gene-AC56_RS33875;Name=AC56_RS33875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33875;old_locus_tag=AC56_5467
NZ_JJLS01000084.1	Protein Homology	CDS	2940	3059	.	-	0	ID=cds-WP_071527722.1;Parent=gene-AC56_RS33875;Dbxref=GenBank:WP_071527722.1;Name=WP_071527722.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022029.6;locus_tag=AC56_RS33875;product=ash family protein;protein_id=WP_071527722.1;transl_table=11
NZ_JJLS01000084.1	RefSeq	pseudogene	3281	4765	.	-	.	ID=gene-AC56_RS33675;Name=AC56_RS33675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33675;pseudo=true
NZ_JJLS01000084.1	Protein Homology	CDS	3281	4765	.	-	0	ID=cds-AC56_RS33675;Parent=gene-AC56_RS33675;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000124153.1;locus_tag=AC56_RS33675;product=terminase;pseudo=true;transl_table=11
NZ_JJLS01000084.1	RefSeq	gene	4765	5958	.	-	.	ID=gene-AC56_RS22300;Name=AC56_RS22300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22300;old_locus_tag=AC56_5470
NZ_JJLS01000084.1	Protein Homology	CDS	4765	5958	.	-	0	ID=cds-WP_032277669.1;Parent=gene-AC56_RS22300;Dbxref=GenBank:WP_032277669.1;Name=WP_032277669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016246563.1;locus_tag=AC56_RS22300;product=terminase;protein_id=WP_032277669.1;transl_table=11
NZ_JJLS01000084.1	RefSeq	gene	6045	6497	.	-	.	ID=gene-AC56_RS22295;Name=AC56_RS22295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22295;old_locus_tag=AC56_5471
NZ_JJLS01000084.1	Protein Homology	CDS	6045	6497	.	-	0	ID=cds-WP_001326849.1;Parent=gene-AC56_RS22295;Dbxref=GenBank:WP_001326849.1;Name=WP_001326849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001448129.1;locus_tag=AC56_RS22295;product=late promoter-activating protein;protein_id=WP_001326849.1;transl_table=11
NZ_JJLS01000084.1	RefSeq	gene	6586	7629	.	-	.	ID=gene-AC56_RS22290;Name=AC56_RS22290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22290;old_locus_tag=AC56_5472
NZ_JJLS01000084.1	Protein Homology	CDS	6586	7629	.	-	0	ID=cds-WP_000648827.1;Parent=gene-AC56_RS22290;Dbxref=GenBank:WP_000648827.1;Name=WP_000648827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000648830.1;locus_tag=AC56_RS22290;product=DUF968 domain-containing protein;protein_id=WP_000648827.1;transl_table=11
NZ_JJLS01000084.1	RefSeq	gene	7657	7836	.	-	.	ID=gene-AC56_RS22285;Name=AC56_RS22285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22285;old_locus_tag=AC56_5473
NZ_JJLS01000084.1	Protein Homology	CDS	7657	7836	.	-	0	ID=cds-WP_032277668.1;Parent=gene-AC56_RS22285;Dbxref=GenBank:WP_032277668.1;Name=WP_032277668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113019.1;locus_tag=AC56_RS22285;product=hypothetical protein;protein_id=WP_032277668.1;transl_table=11
NZ_JJLS01000084.1	RefSeq	gene	7841	8221	.	-	.	ID=gene-AC56_RS22280;Name=AC56_RS22280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22280;old_locus_tag=AC56_5474
NZ_JJLS01000084.1	Protein Homology	CDS	7841	8221	.	-	0	ID=cds-WP_001216033.1;Parent=gene-AC56_RS22280;Dbxref=GenBank:WP_001216033.1;Name=WP_001216033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001216034.1;locus_tag=AC56_RS22280;product=type II toxin-antitoxin system death-on-curing family toxin;protein_id=WP_001216033.1;transl_table=11
NZ_JJLS01000084.1	RefSeq	gene	8221	8442	.	-	.	ID=gene-AC56_RS22275;Name=AC56_RS22275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22275;old_locus_tag=AC56_5475
NZ_JJLS01000084.1	Protein Homology	CDS	8221	8442	.	-	0	ID=cds-WP_001190712.1;Parent=gene-AC56_RS22275;Dbxref=GenBank:WP_001190712.1;Name=WP_001190712.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001603498.1;locus_tag=AC56_RS22275;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_001190712.1;transl_table=11
NZ_JJLS01000084.1	RefSeq	gene	8625	10181	.	+	.	ID=gene-AC56_RS22270;Name=AC56_RS22270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22270;old_locus_tag=AC56_5476
NZ_JJLS01000084.1	Protein Homology	CDS	8625	10181	.	+	0	ID=cds-WP_032282520.1;Parent=gene-AC56_RS22270;Dbxref=GenBank:WP_032282520.1;Name=WP_032282520.1;Ontology_term=GO:0009307,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220915.1;locus_tag=AC56_RS22270;product=type I restriction-modification system subunit M;protein_id=WP_032282520.1;transl_table=11
NZ_JJLS01000084.1	RefSeq	pseudogene	10441	10902	.	+	.	ID=gene-AC56_RS28470;Name=AC56_RS28470;end_range=10902,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS28470;partial=true;pseudo=true
NZ_JJLS01000084.1	Protein Homology	CDS	10441	10902	.	+	0	ID=cds-AC56_RS28470;Parent=gene-AC56_RS28470;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006304,GO:0003677;end_range=10902,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: protein motif:HMM:NF013579.6;locus_tag=AC56_RS28470;partial=true;product=restriction endonuclease subunit S;pseudo=true;transl_table=11
NZ_JJLS01000084.1	RefSeq	pseudogene	11098	11675	.	-	.	ID=gene-AC56_RS22265;Name=AC56_RS22265;end_range=11675,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS22265;old_locus_tag=AC56_5477;partial=true;pseudo=true
NZ_JJLS01000084.1	Protein Homology	CDS	11098	11675	.	-	0	ID=cds-AC56_RS22265;Parent=gene-AC56_RS22265;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=11675,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=AC56_RS22265;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000085.1 1 11540
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000085.1	RefSeq	region	1	11540	.	+	.	ID=NZ_JJLS01000085.1:1..11540;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000085.1	RefSeq	gene	1	303	.	+	.	ID=gene-AC56_RS22260;Name=AC56_RS22260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22260;old_locus_tag=AC56_5478;partial=true;start_range=.,1
NZ_JJLS01000085.1	Protein Homology	CDS	1	303	.	+	0	ID=cds-WP_032282521.1;Parent=gene-AC56_RS22260;Dbxref=GenBank:WP_032282521.1;Name=WP_032282521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS22260;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032282521.1;start_range=.,1;transl_table=11
NZ_JJLS01000085.1	RefSeq	gene	417	572	.	+	.	ID=gene-AC56_RS32575;Name=AC56_RS32575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS32575
NZ_JJLS01000085.1	GeneMarkS-2+	CDS	417	572	.	+	0	ID=cds-WP_152922752.1;Parent=gene-AC56_RS32575;Dbxref=GenBank:WP_152922752.1;Name=WP_152922752.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS32575;product=hypothetical protein;protein_id=WP_152922752.1;transl_table=11
NZ_JJLS01000085.1	RefSeq	gene	584	976	.	+	.	ID=gene-AC56_RS22255;Name=AC56_RS22255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22255;old_locus_tag=AC56_5480
NZ_JJLS01000085.1	Protein Homology	CDS	584	976	.	+	0	ID=cds-WP_001281116.1;Parent=gene-AC56_RS22255;Dbxref=GenBank:WP_001281116.1;Name=WP_001281116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001281114.1;locus_tag=AC56_RS22255;product=hypothetical protein;protein_id=WP_001281116.1;transl_table=11
NZ_JJLS01000085.1	RefSeq	gene	1294	2154	.	+	.	ID=gene-AC56_RS22250;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=AC56_RS22250;old_locus_tag=AC56_5481
NZ_JJLS01000085.1	Protein Homology	CDS	1294	2154	.	+	0	ID=cds-WP_021546926.1;Parent=gene-AC56_RS22250;Dbxref=GenBank:WP_021546926.1;Name=WP_021546926.1;gbkey=CDS;gene=repA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001076427.1;locus_tag=AC56_RS22250;product=replication protein RepA;protein_id=WP_021546926.1;transl_table=11
NZ_JJLS01000085.1	RefSeq	gene	2554	3759	.	+	.	ID=gene-AC56_RS22245;Name=AC56_RS22245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22245;old_locus_tag=AC56_5482
NZ_JJLS01000085.1	Protein Homology	CDS	2554	3759	.	+	0	ID=cds-WP_000817632.1;Parent=gene-AC56_RS22245;Dbxref=GenBank:WP_000817632.1;Name=WP_000817632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152349.1;locus_tag=AC56_RS22245;product=AAA family ATPase;protein_id=WP_000817632.1;transl_table=11
NZ_JJLS01000085.1	RefSeq	gene	3756	4721	.	+	.	ID=gene-AC56_RS22240;Name=AC56_RS22240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22240;old_locus_tag=AC56_5483
NZ_JJLS01000085.1	Protein Homology	CDS	3756	4721	.	+	0	ID=cds-WP_000725192.1;Parent=gene-AC56_RS22240;Dbxref=GenBank:WP_000725192.1;Name=WP_000725192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000725191.1;locus_tag=AC56_RS22240;product=ParB family protein;protein_id=WP_000725192.1;transl_table=11
NZ_JJLS01000085.1	RefSeq	gene	4986	6692	.	+	.	ID=gene-AC56_RS22235;Name=AC56_RS22235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22235;old_locus_tag=AC56_5484
NZ_JJLS01000085.1	Protein Homology	CDS	4986	6692	.	+	0	ID=cds-WP_032277753.1;Parent=gene-AC56_RS22235;Dbxref=GenBank:WP_032277753.1;Name=WP_032277753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000067705.1;locus_tag=AC56_RS22235;product=hypothetical protein;protein_id=WP_032277753.1;transl_table=11
NZ_JJLS01000085.1	RefSeq	gene	6752	8341	.	+	.	ID=gene-AC56_RS22230;Name=AC56_RS22230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22230;old_locus_tag=AC56_5485
NZ_JJLS01000085.1	Protein Homology	CDS	6752	8341	.	+	0	ID=cds-WP_032277754.1;Parent=gene-AC56_RS22230;Dbxref=GenBank:WP_032277754.1;Name=WP_032277754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774496.1;locus_tag=AC56_RS22230;product=hypothetical protein;protein_id=WP_032277754.1;transl_table=11
NZ_JJLS01000085.1	RefSeq	gene	8351	9166	.	+	.	ID=gene-AC56_RS22225;Name=AC56_RS22225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22225;old_locus_tag=AC56_5486
NZ_JJLS01000085.1	Protein Homology	CDS	8351	9166	.	+	0	ID=cds-WP_032277755.1;Parent=gene-AC56_RS22225;Dbxref=GenBank:WP_032277755.1;Name=WP_032277755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016236899.1;locus_tag=AC56_RS22225;product=hypothetical protein;protein_id=WP_032277755.1;transl_table=11
NZ_JJLS01000085.1	RefSeq	gene	9279	9497	.	-	.	ID=gene-AC56_RS33880;Name=AC56_RS33880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33880;old_locus_tag=AC56_5487
NZ_JJLS01000085.1	Protein Homology	CDS	9279	9497	.	-	0	ID=cds-WP_001420245.1;Parent=gene-AC56_RS33880;Dbxref=GenBank:WP_001420245.1;Name=WP_001420245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001345490.1;locus_tag=AC56_RS33880;product=hypothetical protein;protein_id=WP_001420245.1;transl_table=11
NZ_JJLS01000085.1	RefSeq	gene	9502	9783	.	+	.	ID=gene-AC56_RS33885;Name=AC56_RS33885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33885
NZ_JJLS01000085.1	GeneMarkS-2+	CDS	9502	9783	.	+	0	ID=cds-WP_001420246.1;Parent=gene-AC56_RS33885;Dbxref=GenBank:WP_001420246.1;Name=WP_001420246.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS33885;product=hypothetical protein;protein_id=WP_001420246.1;transl_table=11
NZ_JJLS01000085.1	RefSeq	gene	9795	10304	.	+	.	ID=gene-AC56_RS0124915;Name=AC56_RS0124915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0124915
NZ_JJLS01000085.1	Protein Homology	CDS	9795	10304	.	+	0	ID=cds-WP_000509940.1;Parent=gene-AC56_RS0124915;Dbxref=GenBank:WP_000509940.1;Name=WP_000509940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000509944.1;locus_tag=AC56_RS0124915;product=hypothetical protein;protein_id=WP_000509940.1;transl_table=11
NZ_JJLS01000085.1	RefSeq	gene	10580	11540	.	-	.	ID=gene-AC56_RS22220;Name=AC56_RS22220;end_range=11540,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22220;old_locus_tag=AC56_5489;partial=true
NZ_JJLS01000085.1	Protein Homology	CDS	10580	11540	.	-	1	ID=cds-WP_032282478.1-3;Parent=gene-AC56_RS22220;Dbxref=GenBank:WP_032282478.1;Name=WP_032282478.1;Ontology_term=GO:0006313,GO:0004803;end_range=11540,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS22220;partial=true;product=IS4-like element IS421 family transposase;protein_id=WP_032282478.1;transl_table=11
##sequence-region NZ_JJLS01000086.1 1 9346
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000086.1	RefSeq	region	1	9346	.	+	.	ID=NZ_JJLS01000086.1:1..9346;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000086.1	RefSeq	pseudogene	1	1695	.	-	.	ID=gene-AC56_RS0124920;Name=AC56_RS0124920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0124920;old_locus_tag=AC56_5491;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000086.1	Protein Homology	CDS	1	1695	.	-	0	ID=cds-AC56_RS0124920;Parent=gene-AC56_RS0124920;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309822.1;locus_tag=AC56_RS0124920;partial=true;product=phage portal protein;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000086.1	RefSeq	gene	1641	1862	.	-	.	ID=gene-AC56_RS22215;Name=AC56_RS22215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22215;old_locus_tag=AC56_5492
NZ_JJLS01000086.1	Protein Homology	CDS	1641	1862	.	-	0	ID=cds-WP_001063096.1;Parent=gene-AC56_RS22215;Dbxref=GenBank:WP_001063096.1;Name=WP_001063096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001063105.1;locus_tag=AC56_RS22215;product=hypothetical protein;protein_id=WP_001063096.1;transl_table=11
NZ_JJLS01000086.1	RefSeq	gene	1907	3844	.	-	.	ID=gene-AC56_RS22210;Name=AC56_RS22210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22210;old_locus_tag=AC56_5493
NZ_JJLS01000086.1	Protein Homology	CDS	1907	3844	.	-	0	ID=cds-WP_032277603.1;Parent=gene-AC56_RS22210;Dbxref=GenBank:WP_032277603.1;Name=WP_032277603.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309570.1;locus_tag=AC56_RS22210;product=phage major capsid protein;protein_id=WP_032277603.1;transl_table=11
NZ_JJLS01000086.1	RefSeq	gene	3908	5569	.	-	.	ID=gene-AC56_RS22205;Name=AC56_RS22205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22205;old_locus_tag=AC56_5494
NZ_JJLS01000086.1	Protein Homology	CDS	3908	5569	.	-	0	ID=cds-WP_032277605.1;Parent=gene-AC56_RS22205;Dbxref=GenBank:WP_032277605.1;Name=WP_032277605.1;Ontology_term=GO:0004519,GO:0005524,GO:0140657;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP binding|0005524||IEA,ATP-dependent activity|0140657||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309569.1;locus_tag=AC56_RS22205;product=terminase large subunit;protein_id=WP_032277605.1;transl_table=11
NZ_JJLS01000086.1	RefSeq	gene	5566	6129	.	-	.	ID=gene-AC56_RS22200;Name=AC56_RS22200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22200;old_locus_tag=AC56_5495
NZ_JJLS01000086.1	Protein Homology	CDS	5566	6129	.	-	0	ID=cds-WP_021569242.1;Parent=gene-AC56_RS22200;Dbxref=GenBank:WP_021569242.1;Name=WP_021569242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309568.1;locus_tag=AC56_RS22200;product=terminase small subunit;protein_id=WP_021569242.1;transl_table=11
NZ_JJLS01000086.1	RefSeq	gene	6420	6785	.	-	.	ID=gene-AC56_RS22195;Name=AC56_RS22195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22195;old_locus_tag=AC56_5496
NZ_JJLS01000086.1	Protein Homology	CDS	6420	6785	.	-	0	ID=cds-WP_000829198.1;Parent=gene-AC56_RS22195;Dbxref=GenBank:WP_000829198.1;Name=WP_000829198.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309567.1;locus_tag=AC56_RS22195;product=HNH endonuclease;protein_id=WP_000829198.1;transl_table=11
NZ_JJLS01000086.1	RefSeq	gene	6827	7027	.	+	.	ID=gene-AC56_RS22190;Name=AC56_RS22190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22190;old_locus_tag=AC56_5497
NZ_JJLS01000086.1	Protein Homology	CDS	6827	7027	.	+	0	ID=cds-WP_000095744.1;Parent=gene-AC56_RS22190;Dbxref=GenBank:WP_000095744.1;Name=WP_000095744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000095744.1;locus_tag=AC56_RS22190;product=YlcI/YnfO family protein;protein_id=WP_000095744.1;transl_table=11
NZ_JJLS01000086.1	RefSeq	gene	7159	7485	.	-	.	ID=gene-AC56_RS22185;Name=AC56_RS22185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22185;old_locus_tag=AC56_5498
NZ_JJLS01000086.1	Protein Homology	CDS	7159	7485	.	-	0	ID=cds-WP_000828072.1;Parent=gene-AC56_RS22185;Dbxref=GenBank:WP_000828072.1;Name=WP_000828072.1;Ontology_term=GO:0006810,GO:0015291;gbkey=CDS;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828066.1;locus_tag=AC56_RS22185;product=TonB family protein;protein_id=WP_000828072.1;transl_table=11
NZ_JJLS01000086.1	RefSeq	gene	7824	8291	.	-	.	ID=gene-AC56_RS33890;Name=AC56_RS33890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33890;old_locus_tag=AC56_5499
NZ_JJLS01000086.1	Protein Homology	CDS	7824	8291	.	-	0	ID=cds-WP_001420468.1;Parent=gene-AC56_RS33890;Dbxref=GenBank:WP_001420468.1;Name=WP_001420468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309813.1;locus_tag=AC56_RS33890;product=lysis protein;protein_id=WP_001420468.1;transl_table=11
NZ_JJLS01000086.1	RefSeq	gene	8293	8379	.	-	.	ID=gene-AC56_RS0124935;Name=AC56_RS0124935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0124935
NZ_JJLS01000086.1	Protein Homology	CDS	8293	8379	.	-	0	ID=cds-WP_032140280.1;Parent=gene-AC56_RS0124935;Dbxref=GenBank:WP_032140280.1;Name=WP_032140280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309121.1;locus_tag=AC56_RS0124935;product=hypothetical protein;protein_id=WP_032140280.1;transl_table=11
NZ_JJLS01000086.1	RefSeq	gene	8391	8546	.	-	.	ID=gene-AC56_RS33170;Name=AC56_RS33170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33170;old_locus_tag=AC56_5500
NZ_JJLS01000086.1	Protein Homology	CDS	8391	8546	.	-	0	ID=cds-WP_042004856.1;Parent=gene-AC56_RS33170;Dbxref=GenBank:WP_042004856.1;Name=WP_042004856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000788411.1;locus_tag=AC56_RS33170;product=hypothetical protein;protein_id=WP_042004856.1;transl_table=11
NZ_JJLS01000086.1	RefSeq	gene	8510	8641	.	-	.	ID=gene-AC56_RS33505;Name=AC56_RS33505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33505;old_locus_tag=AC56_5501
NZ_JJLS01000086.1	Protein Homology	CDS	8510	8641	.	-	0	ID=cds-WP_001280935.1;Parent=gene-AC56_RS33505;Dbxref=GenBank:WP_001280935.1;Name=WP_001280935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280968.1;locus_tag=AC56_RS33505;product=hypothetical protein;protein_id=WP_001280935.1;transl_table=11
NZ_JJLS01000086.1	RefSeq	pseudogene	8774	9346	.	+	.	ID=gene-AC56_RS31880;Name=AC56_RS31880;end_range=9346,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS31880;partial=true;pseudo=true
NZ_JJLS01000086.1	Protein Homology	CDS	8774	9346	.	+	0	ID=cds-AC56_RS31880;Parent=gene-AC56_RS31880;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=9346,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AC56_RS31880;partial=true;product=transposase;pseudo=true;transl_table=11
NZ_JJLS01000086.1	cmsearch	sequence_feature	9055	9171	.	+	.	ID=id-AC56_RS31880;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS31880;pseudo=true
##sequence-region NZ_JJLS01000087.1 1 2230
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000087.1	RefSeq	region	1	2230	.	+	.	ID=NZ_JJLS01000087.1:1..2230;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000087.1	RefSeq	gene	1	261	.	+	.	ID=gene-AC56_RS22155;Name=AC56_RS22155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22155;old_locus_tag=AC56_5504;partial=true;start_range=.,1
NZ_JJLS01000087.1	Protein Homology	CDS	1	261	.	+	0	ID=cds-WP_032282522.1;Parent=gene-AC56_RS22155;Dbxref=GenBank:WP_032282522.1;Name=WP_032282522.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312254.1;locus_tag=AC56_RS22155;partial=true;product=HAD-IA family hydrolase;protein_id=WP_032282522.1;start_range=.,1;transl_table=11
NZ_JJLS01000087.1	RefSeq	gene	254	1258	.	+	.	ID=gene-AC56_RS22150;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=AC56_RS22150;old_locus_tag=AC56_5505
NZ_JJLS01000087.1	Protein Homology	CDS	254	1258	.	+	0	ID=cds-WP_000165552.1;Parent=gene-AC56_RS22150;Dbxref=GenBank:WP_000165552.1;Name=WP_000165552.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417843.1;locus_tag=AC56_RS22150;product=tryptophan--tRNA ligase;protein_id=WP_000165552.1;transl_table=11
NZ_JJLS01000087.1	RefSeq	pseudogene	1548	1706	.	+	.	ID=gene-AC56_RS28505;Name=AC56_RS28505;end_range=1706,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS28505;old_locus_tag=AC56_5507;partial=true;pseudo=true
NZ_JJLS01000087.1	Protein Homology	CDS	1548	1706	.	+	0	ID=cds-AC56_RS28505;Parent=gene-AC56_RS28505;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1706,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026214.1;locus_tag=AC56_RS28505;partial=true;product=GntR family transcriptional regulator YhfZ;pseudo=true;transl_table=11
NZ_JJLS01000087.1	RefSeq	pseudogene	1741	2230	.	+	.	ID=gene-AC56_RS30955;Name=AC56_RS30955;end_range=2230,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS30955;partial=true;pseudo=true
NZ_JJLS01000087.1	Protein Homology	CDS	1741	2230	.	+	0	ID=cds-AC56_RS30955;Parent=gene-AC56_RS30955;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;end_range=2230,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=AC56_RS30955;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000088.1 1 1827
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000088.1	RefSeq	region	1	1827	.	+	.	ID=NZ_JJLS01000088.1:1..1827;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000088.1	RefSeq	gene	344	1555	.	-	.	ID=gene-AC56_RS22140;Name=punC;gbkey=Gene;gene=punC;gene_biotype=protein_coding;gene_synonym=ydhC;locus_tag=AC56_RS22140;old_locus_tag=AC56_5509
NZ_JJLS01000088.1	Protein Homology	CDS	344	1555	.	-	0	ID=cds-WP_001182363.1-2;Parent=gene-AC56_RS22140;Dbxref=GenBank:WP_001182363.1;Name=WP_001182363.1;Ontology_term=GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310396.1;locus_tag=AC56_RS22140;product=purine nucleoside transporter PunC;protein_id=WP_001182363.1;transl_table=11
NZ_JJLS01000088.1	RefSeq	gene	1668	1827	.	+	.	ID=gene-AC56_RS28515;Name=AC56_RS28515;end_range=1827,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS28515;partial=true
NZ_JJLS01000088.1	Protein Homology	CDS	1668	1827	.	+	0	ID=cds-WP_001505255.1;Parent=gene-AC56_RS28515;Dbxref=GenBank:WP_001505255.1;Name=WP_001505255.1;Ontology_term=GO:0006355,GO:0003700;end_range=1827,.;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020236337.1;locus_tag=AC56_RS28515;partial=true;product=LysR family transcriptional regulator;protein_id=WP_001505255.1;transl_table=11
##sequence-region NZ_JJLS01000089.1 1 14869
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000089.1	RefSeq	region	1	14869	.	+	.	ID=NZ_JJLS01000089.1:1..14869;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000089.1	RefSeq	gene	1	961	.	+	.	ID=gene-AC56_RS22135;Name=AC56_RS22135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22135;old_locus_tag=AC56_5511;partial=true;start_range=.,1
NZ_JJLS01000089.1	Protein Homology	CDS	1	961	.	+	1	ID=cds-WP_032282478.1-4;Parent=gene-AC56_RS22135;Dbxref=GenBank:WP_032282478.1;Name=WP_032282478.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS22135;partial=true;product=IS4-like element IS421 family transposase;protein_id=WP_032282478.1;start_range=.,1;transl_table=11
NZ_JJLS01000089.1	RefSeq	pseudogene	1134	1601	.	+	.	ID=gene-AC56_RS22130;Name=AC56_RS22130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS22130;old_locus_tag=AC56_5512;partial=true;pseudo=true;start_range=.,1134
NZ_JJLS01000089.1	Protein Homology	CDS	1134	1601	.	+	0	ID=cds-AC56_RS22130;Parent=gene-AC56_RS22130;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536648.1;locus_tag=AC56_RS22130;partial=true;product=baseplate J/gp47 family protein;pseudo=true;start_range=.,1134;transl_table=11
NZ_JJLS01000089.1	RefSeq	gene	1592	2176	.	+	.	ID=gene-AC56_RS22125;Name=AC56_RS22125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22125;old_locus_tag=AC56_5513
NZ_JJLS01000089.1	Protein Homology	CDS	1592	2176	.	+	0	ID=cds-WP_000383558.1;Parent=gene-AC56_RS22125;Dbxref=GenBank:WP_000383558.1;Name=WP_000383558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415671.1;locus_tag=AC56_RS22125;product=YmfQ family protein;protein_id=WP_000383558.1;transl_table=11
NZ_JJLS01000089.1	RefSeq	pseudogene	2180	2480	.	+	.	ID=gene-AC56_RS33175;Name=stfP;end_range=2480,.;gbkey=Gene;gene=stfP;gene_biotype=pseudogene;locus_tag=AC56_RS33175;partial=true;pseudo=true
NZ_JJLS01000089.1	Protein Homology	CDS	2180	2480	.	+	0	ID=cds-AC56_RS33175;Parent=gene-AC56_RS33175;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2480,.;gbkey=CDS;gene=stfP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415672.1;locus_tag=AC56_RS33175;partial=true;product=protein StfP;pseudo=true;transl_table=11
NZ_JJLS01000089.1	RefSeq	gene	3109	3516	.	+	.	ID=gene-AC56_RS22115;Name=AC56_RS22115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22115;old_locus_tag=AC56_5515
NZ_JJLS01000089.1	Protein Homology	CDS	3109	3516	.	+	0	ID=cds-WP_032277774.1;Parent=gene-AC56_RS22115;Dbxref=GenBank:WP_032277774.1;Name=WP_032277774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016244977.1;locus_tag=AC56_RS22115;product=tail fiber assembly protein;protein_id=WP_032277774.1;transl_table=11
NZ_JJLS01000089.1	RefSeq	pseudogene	3488	3624	.	-	.	ID=gene-AC56_RS28520;Name=AC56_RS28520;end_range=3624,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS28520;partial=true;pseudo=true
NZ_JJLS01000089.1	Protein Homology	CDS	3488	3624	.	-	0	ID=cds-AC56_RS28520;Parent=gene-AC56_RS28520;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3624,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415673.1;locus_tag=AC56_RS28520;partial=true;product=tail fiber assembly protein;pseudo=true;transl_table=11
NZ_JJLS01000089.1	RefSeq	gene	3676	4227	.	-	.	ID=gene-AC56_RS0124945;Name=AC56_RS0124945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0124945
NZ_JJLS01000089.1	Protein Homology	CDS	3676	4227	.	-	0	ID=cds-WP_016244976.1;Parent=gene-AC56_RS0124945;Dbxref=GenBank:WP_016244976.1;Name=WP_016244976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016244976.1;locus_tag=AC56_RS0124945;product=ATP-dependent Clp protease proteolytic subunit;protein_id=WP_016244976.1;transl_table=11
NZ_JJLS01000089.1	RefSeq	pseudogene	4337	4740	.	+	.	ID=gene-AC56_RS0124950;Name=AC56_RS0124950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0124950;partial=true;pseudo=true;start_range=.,4337
NZ_JJLS01000089.1	Protein Homology	CDS	4337	4740	.	+	0	ID=cds-AC56_RS0124950;Parent=gene-AC56_RS0124950;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694106.1;locus_tag=AC56_RS0124950;partial=true;product=recombinase family protein;pseudo=true;start_range=.,4337;transl_table=11
NZ_JJLS01000089.1	RefSeq	gene	4767	5462	.	-	.	ID=gene-AC56_RS22110;Name=AC56_RS22110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22110;old_locus_tag=AC56_5518
NZ_JJLS01000089.1	Protein Homology	CDS	4767	5462	.	-	0	ID=cds-WP_001514810.1;Parent=gene-AC56_RS22110;Dbxref=GenBank:WP_001514810.1;Name=WP_001514810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001514810.1;locus_tag=AC56_RS22110;product=DUF4145 domain-containing protein;protein_id=WP_001514810.1;transl_table=11
NZ_JJLS01000089.1	RefSeq	gene	5811	6059	.	-	.	ID=gene-AC56_RS22105;Name=AC56_RS22105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22105;old_locus_tag=AC56_5519
NZ_JJLS01000089.1	Protein Homology	CDS	5811	6059	.	-	0	ID=cds-WP_001514811.1;Parent=gene-AC56_RS22105;Dbxref=GenBank:WP_001514811.1;Name=WP_001514811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707727.1;locus_tag=AC56_RS22105;product=DinI-like family protein;protein_id=WP_001514811.1;transl_table=11
NZ_JJLS01000089.1	RefSeq	gene	6121	7218	.	-	.	ID=gene-AC56_RS22100;Name=AC56_RS22100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22100;old_locus_tag=AC56_5520
NZ_JJLS01000089.1	Protein Homology	CDS	6121	7218	.	-	0	ID=cds-WP_001514812.1;Parent=gene-AC56_RS22100;Dbxref=GenBank:WP_001514812.1;Name=WP_001514812.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000332260.1;locus_tag=AC56_RS22100;product=tyrosine-type recombinase/integrase;protein_id=WP_001514812.1;transl_table=11
NZ_JJLS01000089.1	RefSeq	gene	7307	8344	.	+	.	ID=gene-AC56_RS22095;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=AC56_RS22095;old_locus_tag=AC56_5521
NZ_JJLS01000089.1	Protein Homology	CDS	7307	8344	.	+	0	ID=cds-WP_001514813.1;Parent=gene-AC56_RS22095;Dbxref=GenBank:WP_001514813.1;Name=WP_001514813.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313058.1;locus_tag=AC56_RS22095;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_001514813.1;transl_table=11
NZ_JJLS01000089.1	RefSeq	gene	8478	8720	.	+	.	ID=gene-AC56_RS22090;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=AC56_RS22090;old_locus_tag=AC56_5522
NZ_JJLS01000089.1	Protein Homology	CDS	8478	8720	.	+	0	ID=cds-WP_000891404.1;Parent=gene-AC56_RS22090;Dbxref=GenBank:WP_000891404.1;Name=WP_000891404.1;gbkey=CDS;gene=pspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313059.2;locus_tag=AC56_RS22090;product=envelope stress response protein PspG;protein_id=WP_000891404.1;transl_table=11
NZ_JJLS01000089.1	RefSeq	gene	8886	9869	.	-	.	ID=gene-AC56_RS22085;Name=qorA;gbkey=Gene;gene=qorA;gene_biotype=protein_coding;locus_tag=AC56_RS22085;old_locus_tag=AC56_5523
NZ_JJLS01000089.1	Protein Homology	CDS	8886	9869	.	-	0	ID=cds-WP_000235509.1;Parent=gene-AC56_RS22085;Dbxref=GenBank:WP_000235509.1;Name=WP_000235509.1;gbkey=CDS;gene=qorA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313060.1;locus_tag=AC56_RS22085;product=quinone oxidoreductase;protein_id=WP_000235509.1;transl_table=11
NZ_JJLS01000089.1	RefSeq	gene	9952	11367	.	+	.	ID=gene-AC56_RS22080;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=AC56_RS22080;old_locus_tag=AC56_5524
NZ_JJLS01000089.1	Protein Homology	CDS	9952	11367	.	+	0	ID=cds-WP_000918363.1;Parent=gene-AC56_RS22080;Dbxref=GenBank:WP_000918363.1;Name=WP_000918363.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418476.1;locus_tag=AC56_RS22080;product=replicative DNA helicase;protein_id=WP_000918363.1;transl_table=11
NZ_JJLS01000089.1	RefSeq	gene	11420	12499	.	+	.	ID=gene-AC56_RS22075;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=AC56_RS22075;old_locus_tag=AC56_5525
NZ_JJLS01000089.1	Protein Homology	CDS	11420	12499	.	+	0	ID=cds-WP_001147328.1;Parent=gene-AC56_RS22075;Dbxref=GenBank:WP_001147328.1;Name=WP_001147328.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418477.1;locus_tag=AC56_RS22075;product=alanine racemase;protein_id=WP_001147328.1;transl_table=11
NZ_JJLS01000089.1	RefSeq	gene	12752	13945	.	+	.	ID=gene-AC56_RS22070;Name=tyrB;gbkey=Gene;gene=tyrB;gene_biotype=protein_coding;locus_tag=AC56_RS22070;old_locus_tag=AC56_5527
NZ_JJLS01000089.1	Protein Homology	CDS	12752	13945	.	+	0	ID=cds-WP_000486988.1;Parent=gene-AC56_RS22070;Dbxref=GenBank:WP_000486988.1;Name=WP_000486988.1;gbkey=CDS;gene=tyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418478.1;locus_tag=AC56_RS22070;product=aromatic amino acid transaminase;protein_id=WP_000486988.1;transl_table=11
NZ_JJLS01000089.1	RefSeq	pseudogene	14168	14409	.	-	.	ID=gene-AC56_RS33180;Name=AC56_RS33180;end_range=14409,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33180;partial=true;pseudo=true
NZ_JJLS01000089.1	Protein Homology	CDS	14168	14409	.	-	0	ID=cds-AC56_RS33180;Parent=gene-AC56_RS33180;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=14409,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001027387.1;locus_tag=AC56_RS33180;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_JJLS01000089.1	RefSeq	pseudogene	14466	14869	.	+	.	ID=gene-AC56_RS0124960;Name=AC56_RS0124960;end_range=14869,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0124960;partial=true;pseudo=true
NZ_JJLS01000089.1	Protein Homology	CDS	14466	14869	.	+	0	ID=cds-AC56_RS0124960;Parent=gene-AC56_RS0124960;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=14869,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS0124960;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000090.1 1 1379
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000090.1	RefSeq	region	1	1379	.	+	.	ID=NZ_JJLS01000090.1:1..1379;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000090.1	RefSeq	pseudogene	1	281	.	+	.	ID=gene-AC56_RS0124965;Name=AC56_RS0124965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0124965;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000090.1	Protein Homology	CDS	1	281	.	+	2	ID=cds-AC56_RS0124965;Parent=gene-AC56_RS0124965;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415215.1;locus_tag=AC56_RS0124965;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000090.1	RefSeq	gene	322	972	.	-	.	ID=gene-AC56_RS22065;Name=AC56_RS22065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22065;old_locus_tag=AC56_5530
NZ_JJLS01000090.1	Protein Homology	CDS	322	972	.	-	0	ID=cds-WP_001208814.1;Parent=gene-AC56_RS22065;Dbxref=GenBank:WP_001208814.1;Name=WP_001208814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001208812.1;locus_tag=AC56_RS22065;product=DUF2625 domain-containing protein;protein_id=WP_001208814.1;transl_table=11
NZ_JJLS01000090.1	RefSeq	pseudogene	1088	1379	.	+	.	ID=gene-AC56_RS0124970;Name=AC56_RS0124970;end_range=1379,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0124970;partial=true;pseudo=true
NZ_JJLS01000090.1	Protein Homology	CDS	1088	1379	.	+	0	ID=cds-AC56_RS0124970;Parent=gene-AC56_RS0124970;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=1379,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS0124970;partial=true;product=IS1-like element transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000091.1 1 1936
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000091.1	RefSeq	region	1	1936	.	+	.	ID=NZ_JJLS01000091.1:1..1936;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000091.1	RefSeq	gene	3	59	.	+	.	ID=gene-AC56_RS33895;Name=AC56_RS33895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33895
NZ_JJLS01000091.1	Protein Homology	CDS	3	59	.	+	0	ID=cds-WP_003032489.1;Parent=gene-AC56_RS33895;Dbxref=GenBank:WP_003032489.1;Name=WP_003032489.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015365.6;locus_tag=AC56_RS33895;product=IS1 family transposase;protein_id=WP_003032489.1;transl_table=11
NZ_JJLS01000091.1	RefSeq	gene	89	1069	.	-	.	ID=gene-AC56_RS22060;Name=AC56_RS22060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22060;old_locus_tag=AC56_5532
NZ_JJLS01000091.1	Protein Homology	CDS	89	1069	.	-	0	ID=cds-WP_032277880.1;Parent=gene-AC56_RS22060;Dbxref=GenBank:WP_032277880.1;Name=WP_032277880.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414793.2;locus_tag=AC56_RS22060;product=IS5-like element ISKpn26 family transposase;protein_id=WP_032277880.1;transl_table=11
NZ_JJLS01000091.1	RefSeq	pseudogene	1151	1399	.	-	.	ID=gene-AC56_RS0124975;Name=AC56_RS0124975;end_range=1399,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0124975;partial=true;pseudo=true;start_range=.,1151
NZ_JJLS01000091.1	Protein Homology	CDS	1151	1399	.	-	0	ID=cds-AC56_RS0124975;Parent=gene-AC56_RS0124975;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1399,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418730.4;locus_tag=AC56_RS0124975;partial=true;product=N-acetylneuraminate epimerase;pseudo=true;start_range=.,1151;transl_table=11
NZ_JJLS01000091.1	RefSeq	gene	1569	1936	.	-	.	ID=gene-AC56_RS22055;Name=AC56_RS22055;end_range=1936,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22055;old_locus_tag=AC56_5534;partial=true
NZ_JJLS01000091.1	Protein Homology	CDS	1569	1936	.	-	2	ID=cds-WP_032282527.1;Parent=gene-AC56_RS22055;Dbxref=GenBank:WP_032282527.1;Name=WP_032282527.1;end_range=1936,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS22055;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032282527.1;transl_table=11
##sequence-region NZ_JJLS01000092.1 1 395
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000092.1	RefSeq	region	1	395	.	+	.	ID=NZ_JJLS01000092.1:1..395;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000092.1	RefSeq	gene	330	395	.	+	.	ID=gene-AC56_RS0124980;Name=AC56_RS0124980;end_range=395,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC56_RS0124980;partial=true
NZ_JJLS01000092.1	cmsearch	rRNA	330	395	.	+	.	ID=rna-AC56_RS0124980;Parent=gene-AC56_RS0124980;Dbxref=RFAM:RF00177;end_range=395,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS0124980;partial=true;product=16S ribosomal RNA
NZ_JJLS01000092.1	cmsearch	exon	330	395	.	+	.	ID=exon-AC56_RS0124980-1;Parent=rna-AC56_RS0124980;Dbxref=RFAM:RF00177;end_range=395,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS0124980;partial=true;product=16S ribosomal RNA
##sequence-region NZ_JJLS01000093.1 1 2047
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000093.1	RefSeq	region	1	2047	.	+	.	ID=NZ_JJLS01000093.1:1..2047;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000093.1	RefSeq	pseudogene	1	2047	.	-	.	ID=gene-AC56_RS28535;Name=AC56_RS28535;end_range=2047,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS28535;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000093.1	Protein Homology	CDS	1	2047	.	-	2	ID=cds-AC56_RS28535;Parent=gene-AC56_RS28535;Note=frameshifted%3B incomplete%3B missing N-terminus and C-terminus;Ontology_term=GO:0019068,GO:0005198,GO:0044423;end_range=2047,.;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001303195.1;locus_tag=AC56_RS28535;partial=true;product=phage portal protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_JJLS01000094.1 1 9668
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000094.1	RefSeq	region	1	9668	.	+	.	ID=NZ_JJLS01000094.1:1..9668;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000094.1	RefSeq	gene	1	148	.	-	.	ID=gene-AC56_RS0124985;Name=AC56_RS0124985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0124985;old_locus_tag=AC56_5537;partial=true;start_range=.,1
NZ_JJLS01000094.1	Protein Homology	CDS	1	148	.	-	0	ID=cds-WP_032305469.1;Parent=gene-AC56_RS0124985;Dbxref=GenBank:WP_032305469.1;Name=WP_032305469.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558153.1;locus_tag=AC56_RS0124985;partial=true;product=IS1 family transposase;protein_id=WP_032305469.1;start_range=.,1;transl_table=11
NZ_JJLS01000094.1	RefSeq	gene	235	303	.	-	.	ID=gene-AC56_RS33185;Name=ykiE;gbkey=Gene;gene=ykiE;gene_biotype=protein_coding;locus_tag=AC56_RS33185
NZ_JJLS01000094.1	Protein Homology	CDS	235	303	.	-	0	ID=cds-WP_211180522.1;Parent=gene-AC56_RS33185;Dbxref=GenBank:WP_211180522.1;Name=WP_211180522.1;gbkey=CDS;gene=ykiE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051215.1;locus_tag=AC56_RS33185;product=protein YkiE;protein_id=WP_211180522.1;transl_table=11
NZ_JJLS01000094.1	RefSeq	gene	440	961	.	+	.	ID=gene-AC56_RS22040;Name=fecI;gbkey=Gene;gene=fecI;gene_biotype=protein_coding;locus_tag=AC56_RS22040;old_locus_tag=AC56_5538
NZ_JJLS01000094.1	Protein Homology	CDS	440	961	.	+	0	ID=cds-WP_001283626.1;Parent=gene-AC56_RS22040;Dbxref=GenBank:WP_001283626.1;Name=WP_001283626.1;gbkey=CDS;gene=fecI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418713.1;locus_tag=AC56_RS22040;product=RNA polymerase sigma factor FecI;protein_id=WP_001283626.1;transl_table=11
NZ_JJLS01000094.1	RefSeq	gene	958	1911	.	+	.	ID=gene-AC56_RS22035;Name=fecR;gbkey=Gene;gene=fecR;gene_biotype=protein_coding;locus_tag=AC56_RS22035;old_locus_tag=AC56_5539
NZ_JJLS01000094.1	Protein Homology	CDS	958	1911	.	+	0	ID=cds-WP_001068910.1;Parent=gene-AC56_RS22035;Dbxref=GenBank:WP_001068910.1;Name=WP_001068910.1;gbkey=CDS;gene=fecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418712.1;locus_tag=AC56_RS22035;product=ferric citrate uptake sigma factor regulator FecR;protein_id=WP_001068910.1;transl_table=11
NZ_JJLS01000094.1	RefSeq	gene	1998	4322	.	+	.	ID=gene-AC56_RS22030;Name=fecA;gbkey=Gene;gene=fecA;gene_biotype=protein_coding;locus_tag=AC56_RS22030;old_locus_tag=AC56_5540
NZ_JJLS01000094.1	Protein Homology	CDS	1998	4322	.	+	0	ID=cds-WP_000188262.1;Parent=gene-AC56_RS22030;Dbxref=GenBank:WP_000188262.1;Name=WP_000188262.1;gbkey=CDS;gene=fecA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418711.1;locus_tag=AC56_RS22030;product=TonB-dependent Fe(3+) dicitrate receptor FecA;protein_id=WP_000188262.1;transl_table=11
NZ_JJLS01000094.1	RefSeq	gene	4367	5269	.	+	.	ID=gene-AC56_RS22025;Name=fecB;gbkey=Gene;gene=fecB;gene_biotype=protein_coding;locus_tag=AC56_RS22025;old_locus_tag=AC56_5541
NZ_JJLS01000094.1	Protein Homology	CDS	4367	5269	.	+	0	ID=cds-WP_000879164.1;Parent=gene-AC56_RS22025;Dbxref=GenBank:WP_000879164.1;Name=WP_000879164.1;gbkey=CDS;gene=fecB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418710.4;locus_tag=AC56_RS22025;product=Fe(3+) dicitrate ABC transporter substrate-binding protein FecB;protein_id=WP_000879164.1;transl_table=11
NZ_JJLS01000094.1	RefSeq	gene	5266	6264	.	+	.	ID=gene-AC56_RS22020;Name=fecC;gbkey=Gene;gene=fecC;gene_biotype=protein_coding;locus_tag=AC56_RS22020;old_locus_tag=AC56_5542
NZ_JJLS01000094.1	Protein Homology	CDS	5266	6264	.	+	0	ID=cds-WP_000125187.1;Parent=gene-AC56_RS22020;Dbxref=GenBank:WP_000125187.1;Name=WP_000125187.1;gbkey=CDS;gene=fecC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418709.1;locus_tag=AC56_RS22020;product=iron-dicitrate ABC transporter permease FecC;protein_id=WP_000125187.1;transl_table=11
NZ_JJLS01000094.1	RefSeq	gene	6261	7217	.	+	.	ID=gene-AC56_RS22015;Name=fecD;gbkey=Gene;gene=fecD;gene_biotype=protein_coding;locus_tag=AC56_RS22015;old_locus_tag=AC56_5543
NZ_JJLS01000094.1	Protein Homology	CDS	6261	7217	.	+	0	ID=cds-WP_000684856.1;Parent=gene-AC56_RS22015;Dbxref=GenBank:WP_000684856.1;Name=WP_000684856.1;gbkey=CDS;gene=fecD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418708.1;locus_tag=AC56_RS22015;product=Fe(3+) dicitrate ABC transporter permease subunit FecD;protein_id=WP_000684856.1;transl_table=11
NZ_JJLS01000094.1	RefSeq	gene	7218	7985	.	+	.	ID=gene-AC56_RS0124990;Name=fecE;gbkey=Gene;gene=fecE;gene_biotype=protein_coding;locus_tag=AC56_RS0124990;old_locus_tag=AC56_5545
NZ_JJLS01000094.1	Protein Homology	CDS	7218	7985	.	+	0	ID=cds-WP_000175457.1;Parent=gene-AC56_RS0124990;Dbxref=GenBank:WP_000175457.1;Name=WP_000175457.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fecE;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418707.1;locus_tag=AC56_RS0124990;product=Fe(3+) dicitrate ABC transporter ATP-binding protein FecE;protein_id=WP_000175457.1;transl_table=11
NZ_JJLS01000094.1	RefSeq	gene	8542	8799	.	-	.	ID=gene-AC56_RS32585;Name=AC56_RS32585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS32585;old_locus_tag=AC56_5547
NZ_JJLS01000094.1	GeneMarkS-2+	CDS	8542	8799	.	-	0	ID=cds-WP_000177057.1;Parent=gene-AC56_RS32585;Dbxref=GenBank:WP_000177057.1;Name=WP_000177057.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS32585;product=hypothetical protein;protein_id=WP_000177057.1;transl_table=11
NZ_JJLS01000094.1	RefSeq	pseudogene	8882	9668	.	-	.	ID=gene-AC56_RS27685;Name=AC56_RS27685;end_range=9668,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS27685;partial=true;pseudo=true
NZ_JJLS01000094.1	Protein Homology	CDS	8882	9668	.	-	2	ID=cds-AC56_RS27685;Parent=gene-AC56_RS27685;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=9668,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611482.1;locus_tag=AC56_RS27685;partial=true;product=IS3-like element ISEc52 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000095.1 1 10211
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000095.1	RefSeq	region	1	10211	.	+	.	ID=NZ_JJLS01000095.1:1..10211;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000095.1	RefSeq	gene	1	444	.	-	.	ID=gene-AC56_RS22000;Name=AC56_RS22000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS22000;old_locus_tag=AC56_5549;partial=true;start_range=.,1
NZ_JJLS01000095.1	Protein Homology	CDS	1	444	.	-	0	ID=cds-WP_032282877.1;Parent=gene-AC56_RS22000;Dbxref=GenBank:WP_032282877.1;Name=WP_032282877.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS22000;partial=true;product=IS5 family transposase;protein_id=WP_032282877.1;start_range=.,1;transl_table=11
NZ_JJLS01000095.1	RefSeq	gene	424	999	.	+	.	ID=gene-AC56_RS21995;Name=AC56_RS21995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS21995;old_locus_tag=AC56_5550
NZ_JJLS01000095.1	Protein Homology	CDS	424	999	.	+	0	ID=cds-WP_032278489.1;Parent=gene-AC56_RS21995;Dbxref=GenBank:WP_032278489.1;Name=WP_032278489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001145615.1;locus_tag=AC56_RS21995;product=hypothetical protein;protein_id=WP_032278489.1;transl_table=11
NZ_JJLS01000095.1	RefSeq	gene	1076	1408	.	-	.	ID=gene-AC56_RS0125000;Name=AC56_RS0125000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0125000
NZ_JJLS01000095.1	Protein Homology	CDS	1076	1408	.	-	0	ID=cds-WP_032278488.1;Parent=gene-AC56_RS0125000;Dbxref=GenBank:WP_032278488.1;Name=WP_032278488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000867001.1;locus_tag=AC56_RS0125000;product=NTF2 fold immunity protein;protein_id=WP_032278488.1;transl_table=11
NZ_JJLS01000095.1	RefSeq	gene	1408	5649	.	-	.	ID=gene-AC56_RS21990;Name=AC56_RS21990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS21990;old_locus_tag=AC56_5551
NZ_JJLS01000095.1	Protein Homology	CDS	1408	5649	.	-	0	ID=cds-WP_032282533.1;Parent=gene-AC56_RS21990;Dbxref=GenBank:WP_032282533.1;Name=WP_032282533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014625.1;locus_tag=AC56_RS21990;product=RHS element core protein;protein_id=WP_032282533.1;transl_table=11
NZ_JJLS01000095.1	RefSeq	gene	6162	6611	.	+	.	ID=gene-AC56_RS21985;Name=AC56_RS21985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS21985;old_locus_tag=AC56_5554
NZ_JJLS01000095.1	Protein Homology	CDS	6162	6611	.	+	0	ID=cds-WP_024191963.1;Parent=gene-AC56_RS21985;Dbxref=GenBank:WP_024191963.1;Name=WP_024191963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005035740.1;locus_tag=AC56_RS21985;product=hypothetical protein;protein_id=WP_024191963.1;transl_table=11
NZ_JJLS01000095.1	RefSeq	gene	7146	7295	.	-	.	ID=gene-AC56_RS32930;Name=AC56_RS32930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS32930
NZ_JJLS01000095.1	GeneMarkS-2+	CDS	7146	7295	.	-	0	ID=cds-WP_204361918.1;Parent=gene-AC56_RS32930;Dbxref=GenBank:WP_204361918.1;Name=WP_204361918.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS32930;product=hypothetical protein;protein_id=WP_204361918.1;transl_table=11
NZ_JJLS01000095.1	RefSeq	gene	7519	8403	.	+	.	ID=gene-AC56_RS21980;Name=AC56_RS21980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS21980;old_locus_tag=AC56_5558
NZ_JJLS01000095.1	Protein Homology	CDS	7519	8403	.	+	0	ID=cds-WP_000041054.1;Parent=gene-AC56_RS21980;Dbxref=GenBank:WP_000041054.1;Name=WP_000041054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001587348.1;locus_tag=AC56_RS21980;product=integrase domain-containing protein;protein_id=WP_000041054.1;transl_table=11
NZ_JJLS01000095.1	RefSeq	pseudogene	9775	10211	.	-	.	ID=gene-AC56_RS0125015;Name=AC56_RS0125015;end_range=10211,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0125015;old_locus_tag=AC56_5559;partial=true;pseudo=true
NZ_JJLS01000095.1	Protein Homology	CDS	9775	10211	.	-	2	ID=cds-AC56_RS0125015;Parent=gene-AC56_RS0125015;Note=internal stop%3B incomplete%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=10211,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000055676.1;locus_tag=AC56_RS0125015;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000096.1 1 6203
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000096.1	RefSeq	region	1	6203	.	+	.	ID=NZ_JJLS01000096.1:1..6203;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000096.1	RefSeq	gene	1	229	.	+	.	ID=gene-AC56_RS21975;Name=AC56_RS21975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS21975;old_locus_tag=AC56_5560;partial=true;start_range=.,1
NZ_JJLS01000096.1	Protein Homology	CDS	1	229	.	+	1	ID=cds-WP_032258750.1-2;Parent=gene-AC56_RS21975;Dbxref=GenBank:WP_032258750.1;Name=WP_032258750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313105.1;locus_tag=AC56_RS21975;partial=true;product=amidohydrolase family protein;protein_id=WP_032258750.1;start_range=.,1;transl_table=11
NZ_JJLS01000096.1	RefSeq	gene	229	786	.	+	.	ID=gene-AC56_RS21970;Name=phnN;gbkey=Gene;gene=phnN;gene_biotype=protein_coding;locus_tag=AC56_RS21970;old_locus_tag=AC56_5561
NZ_JJLS01000096.1	Protein Homology	CDS	229	786	.	+	0	ID=cds-WP_000971883.1-2;Parent=gene-AC56_RS21970;Dbxref=GenBank:WP_000971883.1;Name=WP_000971883.1;Ontology_term=GO:0006015,GO:0033863;gbkey=CDS;gene=phnN;go_function=ribose 1%2C5-bisphosphate phosphokinase activity|0033863||IEA;go_process=5-phosphoribose 1-diphosphate biosynthetic process|0006015||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313104.1;locus_tag=AC56_RS21970;product=ribose 1%2C5-bisphosphokinase;protein_id=WP_000971883.1;transl_table=11
NZ_JJLS01000096.1	RefSeq	gene	773	1207	.	+	.	ID=gene-AC56_RS21965;Name=phnO;gbkey=Gene;gene=phnO;gene_biotype=protein_coding;locus_tag=AC56_RS21965;old_locus_tag=AC56_5562
NZ_JJLS01000096.1	Protein Homology	CDS	773	1207	.	+	0	ID=cds-WP_001110490.1-2;Parent=gene-AC56_RS21965;Dbxref=GenBank:WP_001110490.1;Name=WP_001110490.1;gbkey=CDS;gene=phnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418517.1;locus_tag=AC56_RS21965;product=aminoalkylphosphonate N-acetyltransferase;protein_id=WP_001110490.1;transl_table=11
NZ_JJLS01000096.1	RefSeq	gene	1209	1967	.	+	.	ID=gene-AC56_RS21960;Name=phnP;gbkey=Gene;gene=phnP;gene_biotype=protein_coding;locus_tag=AC56_RS21960;old_locus_tag=AC56_5563
NZ_JJLS01000096.1	Protein Homology	CDS	1209	1967	.	+	0	ID=cds-WP_000059908.1-2;Parent=gene-AC56_RS21960;Dbxref=GenBank:WP_000059908.1;Name=WP_000059908.1;Ontology_term=GO:0019700,GO:0008081;gbkey=CDS;gene=phnP;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418516.1;locus_tag=AC56_RS21960;product=phosphonate metabolism protein PhnP;protein_id=WP_000059908.1;transl_table=11
NZ_JJLS01000096.1	RefSeq	gene	2114	2443	.	-	.	ID=gene-AC56_RS21955;Name=yjdP;gbkey=Gene;gene=yjdP;gene_biotype=protein_coding;locus_tag=AC56_RS21955;old_locus_tag=AC56_5564
NZ_JJLS01000096.1	Protein Homology	CDS	2114	2443	.	-	0	ID=cds-WP_000819746.1;Parent=gene-AC56_RS21955;Dbxref=GenBank:WP_000819746.1;Name=WP_000819746.1;gbkey=CDS;gene=yjdP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026281.1;locus_tag=AC56_RS21955;product=DDRRRQL repeat protein YjdP;protein_id=WP_000819746.1;transl_table=11
NZ_JJLS01000096.1	RefSeq	gene	2512	2961	.	-	.	ID=gene-AC56_RS21950;Name=rpiB;gbkey=Gene;gene=rpiB;gene_biotype=protein_coding;gene_synonym=alsI;locus_tag=AC56_RS21950;old_locus_tag=AC56_5565
NZ_JJLS01000096.1	Protein Homology	CDS	2512	2961	.	-	0	ID=cds-WP_000716794.1;Parent=gene-AC56_RS21950;Dbxref=GenBank:WP_000716794.1;Name=WP_000716794.1;gbkey=CDS;gene=rpiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418514.1;locus_tag=AC56_RS21950;product=bifunctional allose-6-phosphate isomerase/ribose-5-phosphate isomerase RpiB;protein_id=WP_000716794.1;transl_table=11
NZ_JJLS01000096.1	RefSeq	gene	3320	4210	.	+	.	ID=gene-AC56_RS21945;Name=alsR;gbkey=Gene;gene=alsR;gene_biotype=protein_coding;locus_tag=AC56_RS21945;old_locus_tag=AC56_5566
NZ_JJLS01000096.1	Protein Homology	CDS	3320	4210	.	+	0	ID=cds-WP_000083216.1;Parent=gene-AC56_RS21945;Dbxref=GenBank:WP_000083216.1;Name=WP_000083216.1;gbkey=CDS;gene=alsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418513.4;locus_tag=AC56_RS21945;product=MurR/RpiR family transcriptional regulator;protein_id=WP_000083216.1;transl_table=11
NZ_JJLS01000096.1	RefSeq	gene	4269	5204	.	+	.	ID=gene-AC56_RS21940;Name=alsB;gbkey=Gene;gene=alsB;gene_biotype=protein_coding;locus_tag=AC56_RS21940;old_locus_tag=AC56_5567
NZ_JJLS01000096.1	Protein Homology	CDS	4269	5204	.	+	0	ID=cds-WP_001046187.1;Parent=gene-AC56_RS21940;Dbxref=GenBank:WP_001046187.1;Name=WP_001046187.1;gbkey=CDS;gene=alsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418512.1;locus_tag=AC56_RS21940;product=D-allose transporter substrate-binding protein;protein_id=WP_001046187.1;transl_table=11
NZ_JJLS01000096.1	RefSeq	pseudogene	5331	5774	.	+	.	ID=gene-AC56_RS21935;Name=AC56_RS21935;end_range=5774,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS21935;old_locus_tag=AC56_5568;partial=true;pseudo=true
NZ_JJLS01000096.1	Protein Homology	CDS	5331	5774	.	+	0	ID=cds-AC56_RS21935;Parent=gene-AC56_RS21935;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005524;end_range=5774,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418511.1;locus_tag=AC56_RS21935;partial=true;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11
NZ_JJLS01000096.1	RefSeq	gene	5842	6203	.	+	.	ID=gene-AC56_RS21930;Name=AC56_RS21930;end_range=6203,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS21930;old_locus_tag=AC56_5569;partial=true
NZ_JJLS01000096.1	Protein Homology	CDS	5842	6203	.	+	0	ID=cds-WP_032278437.1;Parent=gene-AC56_RS21930;Dbxref=GenBank:WP_032278437.1;Name=WP_032278437.1;end_range=6203,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS21930;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032278437.1;transl_table=11
##sequence-region NZ_JJLS01000097.1 1 611
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000097.1	RefSeq	region	1	611	.	+	.	ID=NZ_JJLS01000097.1:1..611;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000097.1	RefSeq	gene	102	176	.	+	.	ID=gene-AC56_RS21920;Name=AC56_RS21920;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS21920;old_locus_tag=AC56_5571
NZ_JJLS01000097.1	tRNAscan-SE	tRNA	102	176	.	+	.	ID=rna-AC56_RS21920;Parent=gene-AC56_RS21920;anticodon=(pos:134..136);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS21920;product=tRNA-Gln
NZ_JJLS01000097.1	tRNAscan-SE	exon	102	176	.	+	.	ID=exon-AC56_RS21920-1;Parent=rna-AC56_RS21920;anticodon=(pos:134..136);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS21920;product=tRNA-Gln
NZ_JJLS01000097.1	RefSeq	gene	211	285	.	+	.	ID=gene-AC56_RS21915;Name=AC56_RS21915;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS21915;old_locus_tag=AC56_5572
NZ_JJLS01000097.1	tRNAscan-SE	tRNA	211	285	.	+	.	ID=rna-AC56_RS21915;Parent=gene-AC56_RS21915;anticodon=(pos:243..245);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS21915;product=tRNA-Gln
NZ_JJLS01000097.1	tRNAscan-SE	exon	211	285	.	+	.	ID=exon-AC56_RS21915-1;Parent=rna-AC56_RS21915;anticodon=(pos:243..245);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS21915;product=tRNA-Gln
NZ_JJLS01000097.1	RefSeq	gene	301	377	.	+	.	ID=gene-AC56_RS21910;Name=AC56_RS21910;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS21910;old_locus_tag=AC56_5573
NZ_JJLS01000097.1	tRNAscan-SE	tRNA	301	377	.	+	.	ID=rna-AC56_RS21910;Parent=gene-AC56_RS21910;anticodon=(pos:335..337);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS21910;product=tRNA-Met
NZ_JJLS01000097.1	tRNAscan-SE	exon	301	377	.	+	.	ID=exon-AC56_RS21910-1;Parent=rna-AC56_RS21910;anticodon=(pos:335..337);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS21910;product=tRNA-Met
NZ_JJLS01000097.1	RefSeq	gene	425	499	.	+	.	ID=gene-AC56_RS21905;Name=AC56_RS21905;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS21905;old_locus_tag=AC56_5574
NZ_JJLS01000097.1	tRNAscan-SE	tRNA	425	499	.	+	.	ID=rna-AC56_RS21905;Parent=gene-AC56_RS21905;anticodon=(pos:457..459);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS21905;product=tRNA-Gln
NZ_JJLS01000097.1	tRNAscan-SE	exon	425	499	.	+	.	ID=exon-AC56_RS21905-1;Parent=rna-AC56_RS21905;anticodon=(pos:457..459);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS21905;product=tRNA-Gln
NZ_JJLS01000097.1	RefSeq	gene	537	611	.	+	.	ID=gene-AC56_RS21900;Name=AC56_RS21900;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS21900;old_locus_tag=AC56_5575
NZ_JJLS01000097.1	tRNAscan-SE	tRNA	537	611	.	+	.	ID=rna-AC56_RS21900;Parent=gene-AC56_RS21900;anticodon=(pos:569..571);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS21900;product=tRNA-Gln
NZ_JJLS01000097.1	tRNAscan-SE	exon	537	611	.	+	.	ID=exon-AC56_RS21900-1;Parent=rna-AC56_RS21900;anticodon=(pos:569..571);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS21900;product=tRNA-Gln
##sequence-region NZ_JJLS01000098.1 1 25095
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000098.1	RefSeq	region	1	25095	.	+	.	ID=NZ_JJLS01000098.1:1..25095;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000098.1	RefSeq	pseudogene	1	373	.	-	.	ID=gene-AC56_RS21895;Name=AC56_RS21895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS21895;old_locus_tag=AC56_5576;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000098.1	Protein Homology	CDS	1	373	.	-	0	ID=cds-AC56_RS21895;Parent=gene-AC56_RS21895;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS21895;partial=true;product=IS4 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000098.1	RefSeq	pseudogene	431	577	.	+	.	ID=gene-AC56_RS28555;Name=AC56_RS28555;end_range=577,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS28555;partial=true;pseudo=true;start_range=.,431
NZ_JJLS01000098.1	Protein Homology	CDS	431	577	.	+	0	ID=cds-AC56_RS28555;Parent=gene-AC56_RS28555;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=577,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080195.1;locus_tag=AC56_RS28555;partial=true;product=IS66 family transposase;pseudo=true;start_range=.,431;transl_table=11
NZ_JJLS01000098.1	RefSeq	gene	1016	1816	.	+	.	ID=gene-AC56_RS21890;Name=AC56_RS21890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS21890;old_locus_tag=AC56_5578
NZ_JJLS01000098.1	Protein Homology	CDS	1016	1816	.	+	0	ID=cds-WP_162752972.1;Parent=gene-AC56_RS21890;Dbxref=GenBank:WP_162752972.1;Name=WP_162752972.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024242.6;locus_tag=AC56_RS21890;product=helix-turn-helix domain-containing protein;protein_id=WP_162752972.1;transl_table=11
NZ_JJLS01000098.1	RefSeq	gene	3188	3388	.	+	.	ID=gene-AC56_RS32590;Name=AC56_RS32590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS32590
NZ_JJLS01000098.1	Protein Homology	CDS	3188	3388	.	+	0	ID=cds-WP_001575762.1;Parent=gene-AC56_RS32590;Dbxref=GenBank:WP_001575762.1;Name=WP_001575762.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033650.1;locus_tag=AC56_RS32590;product=ANR family transcriptional regulator;protein_id=WP_001575762.1;transl_table=11
NZ_JJLS01000098.1	RefSeq	pseudogene	3528	3899	.	-	.	ID=gene-AC56_RS21885;Name=AC56_RS21885;end_range=3899,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS21885;old_locus_tag=AC56_5580;partial=true;pseudo=true
NZ_JJLS01000098.1	Protein Homology	CDS	3528	3899	.	-	0	ID=cds-AC56_RS21885;Parent=gene-AC56_RS21885;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0051920;end_range=3899,.;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000843781.1;locus_tag=AC56_RS21885;partial=true;product=carboxymuconolactone decarboxylase family protein;pseudo=true;transl_table=11
NZ_JJLS01000098.1	RefSeq	pseudogene	3887	4003	.	-	.	ID=gene-AC56_RS33190;Name=AC56_RS33190;end_range=4003,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33190;partial=true;pseudo=true;start_range=.,3887
NZ_JJLS01000098.1	Protein Homology	CDS	3887	4003	.	-	0	ID=cds-AC56_RS33190;Parent=gene-AC56_RS33190;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4003,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851036.1;locus_tag=AC56_RS33190;partial=true;product=NAD(P)H-dependent oxidoreductase;pseudo=true;start_range=.,3887;transl_table=11
NZ_JJLS01000098.1	RefSeq	gene	4127	4759	.	-	.	ID=gene-AC56_RS32935;Name=AC56_RS32935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS32935
NZ_JJLS01000098.1	GeneMarkS-2+	CDS	4127	4759	.	-	0	ID=cds-WP_050439835.1;Parent=gene-AC56_RS32935;Dbxref=GenBank:WP_050439835.1;Name=WP_050439835.1;Ontology_term=GO:0015628,GO:0005886,GO:0015627;gbkey=CDS;go_component=plasma membrane|0005886||IEA,type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS32935;product=type II secretion system protein;protein_id=WP_050439835.1;transl_table=11
NZ_JJLS01000098.1	RefSeq	gene	5151	5789	.	+	.	ID=gene-AC56_RS21880;Name=AC56_RS21880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS21880;old_locus_tag=AC56_5581
NZ_JJLS01000098.1	Protein Homology	CDS	5151	5789	.	+	0	ID=cds-WP_032250283.1;Parent=gene-AC56_RS21880;Dbxref=GenBank:WP_032250283.1;Name=WP_032250283.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012422.6;locus_tag=AC56_RS21880;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_032250283.1;transl_table=11
NZ_JJLS01000098.1	RefSeq	gene	5800	6216	.	-	.	ID=gene-AC56_RS0125030;Name=AC56_RS0125030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0125030
NZ_JJLS01000098.1	Protein Homology	CDS	5800	6216	.	-	0	ID=cds-WP_032299572.1;Parent=gene-AC56_RS0125030;Dbxref=GenBank:WP_032299572.1;Name=WP_032299572.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013618.6;locus_tag=AC56_RS0125030;product=lytic transglycosylase domain-containing protein;protein_id=WP_032299572.1;transl_table=11
NZ_JJLS01000098.1	RefSeq	gene	6204	6935	.	-	.	ID=gene-AC56_RS21875;Name=AC56_RS21875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS21875;old_locus_tag=AC56_5582
NZ_JJLS01000098.1	Protein Homology	CDS	6204	6935	.	-	0	ID=cds-WP_032254067.1;Parent=gene-AC56_RS21875;Dbxref=GenBank:WP_032254067.1;Name=WP_032254067.1;Ontology_term=GO:0004190,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575755.1;locus_tag=AC56_RS21875;product=prepilin peptidase;protein_id=WP_032254067.1;transl_table=11
NZ_JJLS01000098.1	RefSeq	gene	6940	7932	.	-	.	ID=gene-AC56_RS21870;Name=AC56_RS21870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS21870;old_locus_tag=AC56_5583
NZ_JJLS01000098.1	Protein Homology	CDS	6940	7932	.	-	0	ID=cds-WP_248701012.1;Parent=gene-AC56_RS21870;Dbxref=GenBank:WP_248701012.1;Name=WP_248701012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575754.1;locus_tag=AC56_RS21870;product=ATPase%2C T2SS/T4P/T4SS family;protein_id=WP_248701012.1;transl_table=11
NZ_JJLS01000098.1	RefSeq	gene	7913	8983	.	-	.	ID=gene-AC56_RS21865;Name=AC56_RS21865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS21865;old_locus_tag=AC56_5584
NZ_JJLS01000098.1	Protein Homology	CDS	7913	8983	.	-	0	ID=cds-WP_032254068.1;Parent=gene-AC56_RS21865;Dbxref=GenBank:WP_032254068.1;Name=WP_032254068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575753.1;locus_tag=AC56_RS21865;product=type II secretion system F family protein;protein_id=WP_032254068.1;transl_table=11
NZ_JJLS01000098.1	RefSeq	gene	8976	10595	.	-	.	ID=gene-AC56_RS21860;Name=AC56_RS21860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS21860;old_locus_tag=AC56_5585
NZ_JJLS01000098.1	Protein Homology	CDS	8976	10595	.	-	0	ID=cds-WP_032277646.1;Parent=gene-AC56_RS21860;Dbxref=GenBank:WP_032277646.1;Name=WP_032277646.1;Ontology_term=GO:0009306,GO:0005524,GO:0016887,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575752.1;locus_tag=AC56_RS21860;product=GspE/PulE family protein;protein_id=WP_032277646.1;transl_table=11
NZ_JJLS01000098.1	RefSeq	gene	10610	11041	.	-	.	ID=gene-AC56_RS0125035;Name=AC56_RS0125035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0125035
NZ_JJLS01000098.1	GeneMarkS-2+	CDS	10610	11041	.	-	0	ID=cds-WP_032277645.1;Parent=gene-AC56_RS0125035;Dbxref=GenBank:WP_032277645.1;Name=WP_032277645.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS0125035;product=hypothetical protein;protein_id=WP_032277645.1;transl_table=11
NZ_JJLS01000098.1	RefSeq	gene	11038	12303	.	-	.	ID=gene-AC56_RS21855;Name=AC56_RS21855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS21855;old_locus_tag=AC56_5587
NZ_JJLS01000098.1	GeneMarkS-2+	CDS	11038	12303	.	-	0	ID=cds-WP_032277644.1;Parent=gene-AC56_RS21855;Dbxref=GenBank:WP_032277644.1;Name=WP_032277644.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS21855;product=type 4b pilus protein PilO2;protein_id=WP_032277644.1;transl_table=11
NZ_JJLS01000098.1	RefSeq	gene	12305	13975	.	-	.	ID=gene-AC56_RS21850;Name=AC56_RS21850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS21850;old_locus_tag=AC56_5588
NZ_JJLS01000098.1	Protein Homology	CDS	12305	13975	.	-	0	ID=cds-WP_032277643.1;Parent=gene-AC56_RS21850;Dbxref=GenBank:WP_032277643.1;Name=WP_032277643.1;Ontology_term=GO:0009297,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575747.1;locus_tag=AC56_RS21850;product=secretin N-terminal domain-containing protein;protein_id=WP_032277643.1;transl_table=11
NZ_JJLS01000098.1	RefSeq	gene	13988	14635	.	-	.	ID=gene-AC56_RS0125040;Name=AC56_RS0125040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0125040
NZ_JJLS01000098.1	Protein Homology	CDS	13988	14635	.	-	0	ID=cds-WP_032277642.1;Parent=gene-AC56_RS0125040;Dbxref=GenBank:WP_032277642.1;Name=WP_032277642.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022136.6;locus_tag=AC56_RS0125040;product=TcpQ domain-containing protein;protein_id=WP_032277642.1;transl_table=11
NZ_JJLS01000098.1	RefSeq	gene	14694	15344	.	-	.	ID=gene-AC56_RS0125045;Name=AC56_RS0125045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0125045
NZ_JJLS01000098.1	Protein Homology	CDS	14694	15344	.	-	0	ID=cds-WP_349237779.1;Parent=gene-AC56_RS0125045;Dbxref=GenBank:WP_349237779.1;Name=WP_349237779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575744.1;locus_tag=AC56_RS0125045;product=type 4 pilus major pilin;protein_id=WP_349237779.1;transl_table=11
NZ_JJLS01000098.1	RefSeq	gene	15535	16344	.	+	.	ID=gene-AC56_RS21845;Name=AC56_RS21845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS21845;old_locus_tag=AC56_5589
NZ_JJLS01000098.1	GeneMarkS-2+	CDS	15535	16344	.	+	0	ID=cds-WP_032277641.1;Parent=gene-AC56_RS21845;Dbxref=GenBank:WP_032277641.1;Name=WP_032277641.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS21845;product=hypothetical protein;protein_id=WP_032277641.1;transl_table=11
NZ_JJLS01000098.1	RefSeq	gene	16334	16864	.	+	.	ID=gene-AC56_RS0125050;Name=AC56_RS0125050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0125050
NZ_JJLS01000098.1	GeneMarkS-2+	CDS	16334	16864	.	+	0	ID=cds-WP_032277640.1;Parent=gene-AC56_RS0125050;Dbxref=GenBank:WP_032277640.1;Name=WP_032277640.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS0125050;product=hypothetical protein;protein_id=WP_032277640.1;transl_table=11
NZ_JJLS01000098.1	RefSeq	gene	17286	17807	.	+	.	ID=gene-AC56_RS0125055;Name=AC56_RS0125055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0125055
NZ_JJLS01000098.1	GeneMarkS-2+	CDS	17286	17807	.	+	0	ID=cds-WP_032277638.1;Parent=gene-AC56_RS0125055;Dbxref=GenBank:WP_032277638.1;Name=WP_032277638.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS0125055;product=type II secretion system protein;protein_id=WP_032277638.1;transl_table=11
NZ_JJLS01000098.1	RefSeq	gene	17761	18327	.	+	.	ID=gene-AC56_RS0125060;Name=AC56_RS0125060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0125060
NZ_JJLS01000098.1	GeneMarkS-2+	CDS	17761	18327	.	+	0	ID=cds-WP_032277637.1;Parent=gene-AC56_RS0125060;Dbxref=GenBank:WP_032277637.1;Name=WP_032277637.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS0125060;product=type IV pilus modification PilV family protein;protein_id=WP_032277637.1;transl_table=11
NZ_JJLS01000098.1	RefSeq	pseudogene	18699	18870	.	+	.	ID=gene-AC56_RS33195;Name=AC56_RS33195;end_range=18870,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33195;partial=true;pseudo=true;start_range=.,18699
NZ_JJLS01000098.1	Protein Homology	CDS	18699	18870	.	+	0	ID=cds-AC56_RS33195;Parent=gene-AC56_RS33195;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=18870,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=AC56_RS33195;partial=true;product=transposase;pseudo=true;start_range=.,18699;transl_table=11
NZ_JJLS01000098.1	RefSeq	gene	18923	20136	.	-	.	ID=gene-AC56_RS21835;Name=AC56_RS21835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS21835;old_locus_tag=AC56_5591
NZ_JJLS01000098.1	Protein Homology	CDS	19848	20136	.	-	0	ID=cds-WP_432757341.1;Parent=gene-AC56_RS21835;Dbxref=GenBank:WP_432757341.1;Name=WP_432757341.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611570.1;locus_tag=AC56_RS21835;product=IS3 family transposase;protein_id=WP_432757341.1;transl_table=11
NZ_JJLS01000098.1	Protein Homology	CDS	18923	19848	.	-	2	ID=cds-WP_432757341.1;Parent=gene-AC56_RS21835;Dbxref=GenBank:WP_432757341.1;Name=WP_432757341.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611570.1;locus_tag=AC56_RS21835;product=IS3 family transposase;protein_id=WP_432757341.1;transl_table=11
NZ_JJLS01000098.1	cmsearch	sequence_feature	19739	19855	.	-	.	ID=id-AC56_RS21835;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS21835
NZ_JJLS01000098.1	RefSeq	gene	20462	20749	.	-	.	ID=gene-AC56_RS21825;Name=AC56_RS21825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS21825;old_locus_tag=AC56_5593
NZ_JJLS01000098.1	Protein Homology	CDS	20462	20749	.	-	0	ID=cds-WP_000222766.1;Parent=gene-AC56_RS21825;Dbxref=GenBank:WP_000222766.1;Name=WP_000222766.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020317119.1;locus_tag=AC56_RS21825;product=type II toxin-antitoxin system RelE family toxin;protein_id=WP_000222766.1;transl_table=11
NZ_JJLS01000098.1	RefSeq	gene	20746	20997	.	-	.	ID=gene-AC56_RS21820;Name=AC56_RS21820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS21820;old_locus_tag=AC56_5594
NZ_JJLS01000098.1	Protein Homology	CDS	20746	20997	.	-	0	ID=cds-WP_001132900.1;Parent=gene-AC56_RS21820;Dbxref=GenBank:WP_001132900.1;Name=WP_001132900.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001595120.1;locus_tag=AC56_RS21820;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_001132900.1;transl_table=11
NZ_JJLS01000098.1	RefSeq	pseudogene	21441	22453	.	+	.	ID=gene-AC56_RS27695;Name=AC56_RS27695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS27695;old_locus_tag=AC56_5596;pseudo=true
NZ_JJLS01000098.1	Protein Homology	CDS	21441	22453	.	+	0	ID=cds-AC56_RS27695;Parent=gene-AC56_RS27695;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000487120.1;locus_tag=AC56_RS27695;product=IS110 family transposase;pseudo=true;transl_table=11
NZ_JJLS01000098.1	RefSeq	gene	23441	24298	.	-	.	ID=gene-AC56_RS21815;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=AC56_RS21815;old_locus_tag=AC56_5597
NZ_JJLS01000098.1	Protein Homology	CDS	23441	24298	.	-	0	ID=cds-WP_000130995.1;Parent=gene-AC56_RS21815;Dbxref=GenBank:WP_000130995.1;Name=WP_000130995.1;Ontology_term=GO:0006276;gbkey=CDS;gene=repA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052675.1;locus_tag=AC56_RS21815;product=incFII family plasmid replication initiator RepA;protein_id=WP_000130995.1;transl_table=11
NZ_JJLS01000098.1	RefSeq	gene	24291	24338	.	-	.	ID=gene-AC56_RS33200;Name=AC56_RS33200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33200
NZ_JJLS01000098.1	Protein Homology	CDS	24291	24338	.	-	0	ID=cds-WP_234812421.1;Parent=gene-AC56_RS33200;Dbxref=GenBank:WP_234812421.1;Name=WP_234812421.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03475.1;locus_tag=AC56_RS33200;product=hypothetical protein;protein_id=WP_234812421.1;transl_table=11
NZ_JJLS01000098.1	RefSeq	gene	24329	24565	.	+	.	ID=gene-AC56_RS33205;Name=AC56_RS33205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33205
NZ_JJLS01000098.1	Protein Homology	CDS	24329	24565	.	+	0	ID=cds-WP_234812420.1;Parent=gene-AC56_RS33205;Dbxref=GenBank:WP_234812420.1;Name=WP_234812420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001410080.1;locus_tag=AC56_RS33205;product=replication protein RepA;protein_id=WP_234812420.1;transl_table=11
NZ_JJLS01000098.1	RefSeq	gene	24601	24858	.	-	.	ID=gene-AC56_RS0125080;Name=AC56_RS0125080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0125080
NZ_JJLS01000098.1	Protein Homology	CDS	24601	24858	.	-	0	ID=cds-WP_000083826.1;Parent=gene-AC56_RS0125080;Dbxref=GenBank:WP_000083826.1;Name=WP_000083826.1;Ontology_term=GO:0006276;gbkey=CDS;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083822.1;locus_tag=AC56_RS0125080;product=replication regulatory protein RepA;protein_id=WP_000083826.1;transl_table=11
##sequence-region NZ_JJLS01000099.1 1 433
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000099.1	RefSeq	region	1	433	.	+	.	ID=NZ_JJLS01000099.1:1..433;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000099.1	RefSeq	gene	1	433	.	+	.	ID=gene-AC56_RS0125085;Name=dfrA14;end_range=433,.;gbkey=Gene;gene=dfrA14;gene_biotype=protein_coding;locus_tag=AC56_RS0125085;partial=true;start_range=.,1
NZ_JJLS01000099.1	Protein Homology	CDS	1	433	.	+	1	ID=cds-WP_032282534.1;Parent=gene-AC56_RS0125085;Dbxref=GenBank:WP_032282534.1;Name=WP_032282534.1;Ontology_term=GO:0004146;end_range=433,.;gbkey=CDS;gene=dfrA14;go_function=dihydrofolate reductase activity|0004146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004201280.1;locus_tag=AC56_RS0125085;partial=true;product=trimethoprim-resistant dihydrofolate reductase DfrA14;protein_id=WP_032282534.1;start_range=.,1;transl_table=11
##sequence-region NZ_JJLS01000100.1 1 497
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000100.1	RefSeq	region	1	497	.	+	.	ID=NZ_JJLS01000100.1:1..497;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000100.1	RefSeq	gene	166	497	.	-	.	ID=gene-AC56_RS21810;Name=AC56_RS21810;end_range=497,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS21810;old_locus_tag=AC56_0001;partial=true
NZ_JJLS01000100.1	Protein Homology	CDS	166	497	.	-	2	ID=cds-WP_001423203.1;Parent=gene-AC56_RS21810;Dbxref=GenBank:WP_001423203.1;Name=WP_001423203.1;end_range=497,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS21810;partial=true;product=IS4 family transposase;protein_id=WP_001423203.1;transl_table=11
##sequence-region NZ_JJLS01000101.1 1 139080
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000101.1	RefSeq	region	1	139080	.	+	.	ID=NZ_JJLS01000101.1:1..139080;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000101.1	RefSeq	pseudogene	1	416	.	-	.	ID=gene-AC56_RS21805;Name=AC56_RS21805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS21805;old_locus_tag=AC56_0002;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000101.1	Protein Homology	CDS	1	416	.	-	0	ID=cds-AC56_RS21805;Parent=gene-AC56_RS21805;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS21805;partial=true;product=IS4 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	494	646	.	-	.	ID=gene-AC56_RS0125090;Name=mokC;gbkey=Gene;gene=mokC;gene_biotype=protein_coding;locus_tag=AC56_RS0125090
NZ_JJLS01000101.1	Protein Homology	CDS	494	646	.	-	0	ID=cds-WP_000809172.1;Parent=gene-AC56_RS0125090;Dbxref=GenBank:WP_000809172.1;Name=WP_000809172.1;gbkey=CDS;gene=mokC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025292.1;locus_tag=AC56_RS0125090;product=type I toxin-antitoxin system toxin MokC;protein_id=WP_000809172.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	1232	2398	.	+	.	ID=gene-AC56_RS21800;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=AC56_RS21800;old_locus_tag=AC56_0003
NZ_JJLS01000101.1	Protein Homology	CDS	1232	2398	.	+	0	ID=cds-WP_032277803.1;Parent=gene-AC56_RS21800;Dbxref=GenBank:WP_032277803.1;Name=WP_032277803.1;Ontology_term=GO:0006814,GO:0006885,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaA;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308044.1;locus_tag=AC56_RS21800;product=Na+/H+ antiporter NhaA;protein_id=WP_032277803.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	2464	3363	.	+	.	ID=gene-AC56_RS21795;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=AC56_RS21795;old_locus_tag=AC56_0004
NZ_JJLS01000101.1	Protein Homology	CDS	2464	3363	.	+	0	ID=cds-WP_001360397.1;Parent=gene-AC56_RS21795;Dbxref=GenBank:WP_001360397.1;Name=WP_001360397.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_705976.2;locus_tag=AC56_RS21795;product=transcriptional activator NhaR;protein_id=WP_001360397.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	pseudogene	3401	4367	.	-	.	ID=gene-AC56_RS32600;Name=AC56_RS32600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS32600;pseudo=true
NZ_JJLS01000101.1	Protein Homology	CDS	3401	4367	.	-	0	ID=cds-AC56_RS32600;Parent=gene-AC56_RS32600;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000871680.1;locus_tag=AC56_RS32600;product=fimbrial family protein;pseudo=true;transl_table=11
NZ_JJLS01000101.1	RefSeq	pseudogene	4380	5711	.	-	.	ID=gene-AC56_RS21785;Name=AC56_RS21785;end_range=5711,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS21785;old_locus_tag=AC56_0007;partial=true;pseudo=true
NZ_JJLS01000101.1	Protein Homology	CDS	4380	5711	.	-	0	ID=cds-AC56_RS21785;Parent=gene-AC56_RS21785;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009297,GO:0015473,GO:0016020;end_range=5711,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308049.1;locus_tag=AC56_RS21785;partial=true;product=fimbria/pilus outer membrane usher protein;pseudo=true;transl_table=11
NZ_JJLS01000101.1	RefSeq	pseudogene	5958	7378	.	-	.	ID=gene-AC56_RS0125100;Name=espX1;gbkey=Gene;gene=espX1;gene_biotype=pseudogene;locus_tag=AC56_RS0125100;pseudo=true
NZ_JJLS01000101.1	Protein Homology	CDS	5958	7378	.	-	0	ID=cds-AC56_RS0125100;Parent=gene-AC56_RS0125100;Note=frameshifted;gbkey=CDS;gene=espX1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308052.1;locus_tag=AC56_RS0125100;product=type III secretion system effector EspX1;pseudo=true;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	7861	8124	.	-	.	ID=gene-AC56_RS0125105;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=AC56_RS0125105;old_locus_tag=AC56_0009
NZ_JJLS01000101.1	Protein Homology	CDS	7861	8124	.	-	0	ID=cds-WP_001274021.1;Parent=gene-AC56_RS0125105;Dbxref=GenBank:WP_001274021.1;Name=WP_001274021.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117633.1;locus_tag=AC56_RS0125105;product=30S ribosomal protein S20;protein_id=WP_001274021.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	8227	8445	.	+	.	ID=gene-AC56_RS0125110;Name=yaaY;gbkey=Gene;gene=yaaY;gene_biotype=protein_coding;locus_tag=AC56_RS0125110
NZ_JJLS01000101.1	Protein Homology	CDS	8227	8445	.	+	0	ID=cds-WP_001300728.1;Parent=gene-AC56_RS0125110;Dbxref=GenBank:WP_001300728.1;Name=WP_001300728.1;gbkey=CDS;gene=yaaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414565.1;locus_tag=AC56_RS0125110;product=DUF2575 family protein;protein_id=WP_001300728.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	8453	9394	.	+	.	ID=gene-AC56_RS21780;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=AC56_RS21780;old_locus_tag=AC56_0010
NZ_JJLS01000101.1	Protein Homology	CDS	8453	9394	.	+	0	ID=cds-WP_000767329.1;Parent=gene-AC56_RS21780;Dbxref=GenBank:WP_000767329.1;Name=WP_000767329.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308055.1;locus_tag=AC56_RS21780;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_000767329.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	9437	12253	.	+	.	ID=gene-AC56_RS21775;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=AC56_RS21775;old_locus_tag=AC56_0011
NZ_JJLS01000101.1	Protein Homology	CDS	9437	12253	.	+	0	ID=cds-WP_001286865.1;Parent=gene-AC56_RS21775;Dbxref=GenBank:WP_001286865.1;Name=WP_001286865.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124083.1;locus_tag=AC56_RS21775;product=isoleucine--tRNA ligase;protein_id=WP_001286865.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	12253	12747	.	+	.	ID=gene-AC56_RS21770;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=AC56_RS21770;old_locus_tag=AC56_0012
NZ_JJLS01000101.1	Protein Homology	CDS	12253	12747	.	+	0	ID=cds-WP_000083369.1;Parent=gene-AC56_RS21770;Dbxref=GenBank:WP_000083369.1;Name=WP_000083369.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414568.1;locus_tag=AC56_RS21770;product=signal peptidase II;protein_id=WP_000083369.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	12872	13321	.	+	.	ID=gene-AC56_RS21765;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;locus_tag=AC56_RS21765;old_locus_tag=AC56_0013
NZ_JJLS01000101.1	Protein Homology	CDS	12872	13321	.	+	0	ID=cds-WP_000004655.1;Parent=gene-AC56_RS21765;Dbxref=GenBank:WP_000004655.1;Name=WP_000004655.1;Ontology_term=GO:0003755;gbkey=CDS;gene=fkpB;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308058.1;locus_tag=AC56_RS21765;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000004655.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	13323	14273	.	+	.	ID=gene-AC56_RS21760;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=AC56_RS21760;old_locus_tag=AC56_0014
NZ_JJLS01000101.1	Protein Homology	CDS	13323	14273	.	+	0	ID=cds-WP_001166405.1;Parent=gene-AC56_RS21760;Dbxref=GenBank:WP_001166405.1;Name=WP_001166405.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124087.1;locus_tag=AC56_RS21760;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_001166405.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	14339	15253	.	+	.	ID=gene-AC56_RS21755;Name=rihC;gbkey=Gene;gene=rihC;gene_biotype=protein_coding;locus_tag=AC56_RS21755;old_locus_tag=AC56_0015
NZ_JJLS01000101.1	Protein Homology	CDS	14339	15253	.	+	0	ID=cds-WP_001239125.1;Parent=gene-AC56_RS21755;Dbxref=GenBank:WP_001239125.1;Name=WP_001239125.1;Ontology_term=GO:0016799;gbkey=CDS;gene=rihC;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_705986.1;locus_tag=AC56_RS21755;product=ribonucleoside hydrolase RihC;protein_id=WP_001239125.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	15420	16241	.	+	.	ID=gene-AC56_RS21750;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=AC56_RS21750;old_locus_tag=AC56_0016
NZ_JJLS01000101.1	Protein Homology	CDS	15420	16241	.	+	0	ID=cds-WP_000543604.1;Parent=gene-AC56_RS21750;Dbxref=GenBank:WP_000543604.1;Name=WP_000543604.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414572.1;locus_tag=AC56_RS21750;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_000543604.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	16697	17845	.	+	.	ID=gene-AC56_RS21745;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=AC56_RS21745;old_locus_tag=AC56_0018
NZ_JJLS01000101.1	Protein Homology	CDS	16697	17845	.	+	0	ID=cds-WP_000597260.1;Parent=gene-AC56_RS21745;Dbxref=GenBank:WP_000597260.1;Name=WP_000597260.1;Ontology_term=GO:0006207,GO:0006541,GO:0004088;gbkey=CDS;gene=carA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308062.1;locus_tag=AC56_RS21745;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_000597260.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	17863	21084	.	+	.	ID=gene-AC56_RS21740;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=AC56_RS21740;old_locus_tag=AC56_0019
NZ_JJLS01000101.1	Protein Homology	CDS	17863	21084	.	+	0	ID=cds-WP_032277806.1;Parent=gene-AC56_RS21740;Dbxref=GenBank:WP_032277806.1;Name=WP_032277806.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308063.1;locus_tag=AC56_RS21740;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_032277806.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	21346	21741	.	+	.	ID=gene-AC56_RS21730;Name=caiF;gbkey=Gene;gene=caiF;gene_biotype=protein_coding;locus_tag=AC56_RS21730;old_locus_tag=AC56_0021
NZ_JJLS01000101.1	Protein Homology	CDS	21346	21741	.	+	0	ID=cds-WP_000333125.1;Parent=gene-AC56_RS21730;Dbxref=GenBank:WP_000333125.1;Name=WP_000333125.1;gbkey=CDS;gene=caiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414576.4;locus_tag=AC56_RS21730;product=carnitine metabolism transcriptional regulator CaiF;protein_id=WP_000333125.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	21950	22540	.	-	.	ID=gene-AC56_RS21725;Name=caiE;gbkey=Gene;gene=caiE;gene_biotype=protein_coding;locus_tag=AC56_RS21725;old_locus_tag=AC56_0022
NZ_JJLS01000101.1	Protein Homology	CDS	21950	22540	.	-	0	ID=cds-WP_012304918.1;Parent=gene-AC56_RS21725;Dbxref=GenBank:WP_012304918.1;Name=WP_012304918.1;gbkey=CDS;gene=caiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308065.2;locus_tag=AC56_RS21725;product=carnitine operon protein CaiE;protein_id=WP_012304918.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	22546	23331	.	-	.	ID=gene-AC56_RS21720;Name=caiD;gbkey=Gene;gene=caiD;gene_biotype=protein_coding;locus_tag=AC56_RS21720;old_locus_tag=AC56_0023
NZ_JJLS01000101.1	Protein Homology	CDS	22546	23331	.	-	0	ID=cds-WP_001295419.1;Parent=gene-AC56_RS21720;Dbxref=GenBank:WP_001295419.1;Name=WP_001295419.1;Ontology_term=GO:0016836;gbkey=CDS;gene=caiD;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414578.2;locus_tag=AC56_RS21720;product=crotonobetainyl-CoA hydratase;protein_id=WP_001295419.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	23440	24993	.	-	.	ID=gene-AC56_RS21715;Name=caiC;gbkey=Gene;gene=caiC;gene_biotype=protein_coding;locus_tag=AC56_RS21715;old_locus_tag=AC56_0024
NZ_JJLS01000101.1	Protein Homology	CDS	23440	24993	.	-	0	ID=cds-WP_001338228.1;Parent=gene-AC56_RS21715;Dbxref=GenBank:WP_001338228.1;Name=WP_001338228.1;Ontology_term=GO:0009437,GO:0016405;gbkey=CDS;gene=caiC;go_function=CoA-ligase activity|0016405||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414579.4;locus_tag=AC56_RS21715;product=crotonobetaine/carnitine-CoA ligase;protein_id=WP_001338228.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	25067	26284	.	-	.	ID=gene-AC56_RS21710;Name=caiB;gbkey=Gene;gene=caiB;gene_biotype=protein_coding;locus_tag=AC56_RS21710;old_locus_tag=AC56_0025
NZ_JJLS01000101.1	Protein Homology	CDS	25067	26284	.	-	0	ID=cds-WP_000349936.1;Parent=gene-AC56_RS21710;Dbxref=GenBank:WP_000349936.1;Name=WP_000349936.1;Ontology_term=GO:0009437,GO:0016782;gbkey=CDS;gene=caiB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414580.1;locus_tag=AC56_RS21710;product=L-carnitine CoA-transferase;protein_id=WP_000349936.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	26413	27555	.	-	.	ID=gene-AC56_RS21705;Name=caiA;gbkey=Gene;gene=caiA;gene_biotype=protein_coding;locus_tag=AC56_RS21705;old_locus_tag=AC56_0026
NZ_JJLS01000101.1	Protein Homology	CDS	26413	27555	.	-	0	ID=cds-WP_000347117.1;Parent=gene-AC56_RS21705;Dbxref=GenBank:WP_000347117.1;Name=WP_000347117.1;Ontology_term=GO:0009437,GO:0003995,GO:0016627;gbkey=CDS;gene=caiA;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124373.1;locus_tag=AC56_RS21705;product=crotonobetainyl-CoA dehydrogenase;protein_id=WP_000347117.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	27586	29100	.	-	.	ID=gene-AC56_RS21700;Name=caiT;gbkey=Gene;gene=caiT;gene_biotype=protein_coding;locus_tag=AC56_RS21700;old_locus_tag=AC56_0027
NZ_JJLS01000101.1	Protein Homology	CDS	27586	29100	.	-	0	ID=cds-WP_000787090.1;Parent=gene-AC56_RS21700;Dbxref=GenBank:WP_000787090.1;Name=WP_000787090.1;gbkey=CDS;gene=caiT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414582.1;locus_tag=AC56_RS21700;product=L-carnitine/gamma-butyrobetaine antiporter;protein_id=WP_000787090.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	29574	30344	.	+	.	ID=gene-AC56_RS21695;Name=fixA;gbkey=Gene;gene=fixA;gene_biotype=protein_coding;locus_tag=AC56_RS21695;old_locus_tag=AC56_0028
NZ_JJLS01000101.1	Protein Homology	CDS	29574	30344	.	+	0	ID=cds-WP_000692204.1;Parent=gene-AC56_RS21695;Dbxref=GenBank:WP_000692204.1;Name=WP_000692204.1;gbkey=CDS;gene=fixA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414583.2;locus_tag=AC56_RS21695;product=electron transfer flavoprotein FixA;protein_id=WP_000692204.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	30359	31300	.	+	.	ID=gene-AC56_RS21690;Name=fixB;gbkey=Gene;gene=fixB;gene_biotype=protein_coding;locus_tag=AC56_RS21690;old_locus_tag=AC56_0029
NZ_JJLS01000101.1	Protein Homology	CDS	30359	31300	.	+	0	ID=cds-WP_001091497.1;Parent=gene-AC56_RS21690;Dbxref=GenBank:WP_001091497.1;Name=WP_001091497.1;gbkey=CDS;gene=fixB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414584.1;locus_tag=AC56_RS21690;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_001091497.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	31351	32637	.	+	.	ID=gene-AC56_RS21685;Name=fixC;gbkey=Gene;gene=fixC;gene_biotype=protein_coding;locus_tag=AC56_RS21685;old_locus_tag=AC56_0030
NZ_JJLS01000101.1	Protein Homology	CDS	31351	32637	.	+	0	ID=cds-WP_001287739.1;Parent=gene-AC56_RS21685;Dbxref=GenBank:WP_001287739.1;Name=WP_001287739.1;gbkey=CDS;gene=fixC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308073.1;locus_tag=AC56_RS21685;product=FAD-dependent oxidoreductase;protein_id=WP_001287739.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	32634	32921	.	+	.	ID=gene-AC56_RS21680;Name=fixX;gbkey=Gene;gene=fixX;gene_biotype=protein_coding;locus_tag=AC56_RS21680;old_locus_tag=AC56_0031
NZ_JJLS01000101.1	Protein Homology	CDS	32634	32921	.	+	0	ID=cds-WP_000203741.1;Parent=gene-AC56_RS21680;Dbxref=GenBank:WP_000203741.1;Name=WP_000203741.1;gbkey=CDS;gene=fixX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308074.1;locus_tag=AC56_RS21680;product=ferredoxin-like protein FixX;protein_id=WP_000203741.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	32980	34311	.	+	.	ID=gene-AC56_RS21675;Name=yaaU;gbkey=Gene;gene=yaaU;gene_biotype=protein_coding;locus_tag=AC56_RS21675;old_locus_tag=AC56_0032
NZ_JJLS01000101.1	Protein Homology	CDS	32980	34311	.	+	0	ID=cds-WP_001183198.1;Parent=gene-AC56_RS21675;Dbxref=GenBank:WP_001183198.1;Name=WP_001183198.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yaaU;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414587.1;locus_tag=AC56_RS21675;product=MFS transporter;protein_id=WP_001183198.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	34419	34949	.	+	.	ID=gene-AC56_RS21670;Name=kefF;gbkey=Gene;gene=kefF;gene_biotype=protein_coding;locus_tag=AC56_RS21670;old_locus_tag=AC56_0033
NZ_JJLS01000101.1	Protein Homology	CDS	34419	34949	.	+	0	ID=cds-WP_000600735.1;Parent=gene-AC56_RS21670;Dbxref=GenBank:WP_000600735.1;Name=WP_000600735.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefF;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706002.1;locus_tag=AC56_RS21670;product=glutathione-regulated potassium-efflux system oxidoreductase KefF;protein_id=WP_000600735.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	34942	36804	.	+	.	ID=gene-AC56_RS21665;Name=kefC;gbkey=Gene;gene=kefC;gene_biotype=protein_coding;locus_tag=AC56_RS21665;old_locus_tag=AC56_0034
NZ_JJLS01000101.1	Protein Homology	CDS	34942	36804	.	+	0	ID=cds-WP_000377129.1;Parent=gene-AC56_RS21665;Dbxref=GenBank:WP_000377129.1;Name=WP_000377129.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefC;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414589.1;locus_tag=AC56_RS21665;product=glutathione-regulated potassium-efflux system protein KefC;protein_id=WP_000377129.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	36996	37475	.	+	.	ID=gene-AC56_RS21660;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=AC56_RS21660;old_locus_tag=AC56_0035
NZ_JJLS01000101.1	Protein Homology	CDS	36996	37475	.	+	0	ID=cds-WP_000624375.1;Parent=gene-AC56_RS21660;Dbxref=GenBank:WP_000624375.1;Name=WP_000624375.1;Ontology_term=GO:0046654,GO:0004146;gbkey=CDS;gene=folA;go_function=dihydrofolate reductase activity|0004146||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456510.1;locus_tag=AC56_RS21660;product=type 3 dihydrofolate reductase;protein_id=WP_000624375.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	37553	38395	.	-	.	ID=gene-AC56_RS21655;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=AC56_RS21655;old_locus_tag=AC56_0036
NZ_JJLS01000101.1	Protein Homology	CDS	37553	38395	.	-	0	ID=cds-WP_000257192.1;Parent=gene-AC56_RS21655;Dbxref=GenBank:WP_000257192.1;Name=WP_000257192.1;Ontology_term=GO:0008803;gbkey=CDS;gene=apaH;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414591.1;locus_tag=AC56_RS21655;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;protein_id=WP_000257192.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	38402	38779	.	-	.	ID=gene-AC56_RS0125125;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=AC56_RS0125125;old_locus_tag=AC56_0037
NZ_JJLS01000101.1	Protein Homology	CDS	38402	38779	.	-	0	ID=cds-WP_000610901.1;Parent=gene-AC56_RS0125125;Dbxref=GenBank:WP_000610901.1;Name=WP_000610901.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308082.1;locus_tag=AC56_RS0125125;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WP_000610901.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	38782	39603	.	-	.	ID=gene-AC56_RS21650;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=AC56_RS21650;old_locus_tag=AC56_0038
NZ_JJLS01000101.1	Protein Homology	CDS	38782	39603	.	-	0	ID=cds-WP_001065381.1;Parent=gene-AC56_RS21650;Dbxref=GenBank:WP_001065381.1;Name=WP_001065381.1;Ontology_term=GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414593.1;locus_tag=AC56_RS21650;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_001065381.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	39600	40589	.	-	.	ID=gene-AC56_RS21645;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=AC56_RS21645;old_locus_tag=AC56_0039
NZ_JJLS01000101.1	Protein Homology	CDS	39600	40589	.	-	0	ID=cds-WP_032277810.1;Parent=gene-AC56_RS21645;Dbxref=GenBank:WP_032277810.1;Name=WP_032277810.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308084.1;locus_tag=AC56_RS21645;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_032277810.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	40589	41875	.	-	.	ID=gene-AC56_RS21640;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=AC56_RS21640;old_locus_tag=AC56_0040
NZ_JJLS01000101.1	Protein Homology	CDS	40589	41875	.	-	0	ID=cds-WP_000800457.1;Parent=gene-AC56_RS21640;Dbxref=GenBank:WP_000800457.1;Name=WP_000800457.1;Ontology_term=GO:0006457,GO:0043165,GO:0050821,GO:0060274,GO:0003755,GO:0042277,GO:0051082,GO:0030288;gbkey=CDS;gene=surA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,peptide binding|0042277||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA,protein stabilization|0050821||IEA,maintenance of stationary phase|0060274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308085.1;locus_tag=AC56_RS21640;product=peptidylprolyl isomerase SurA;protein_id=WP_000800457.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	41928	44282	.	-	.	ID=gene-AC56_RS21635;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=AC56_RS21635;old_locus_tag=AC56_0041
NZ_JJLS01000101.1	Protein Homology	CDS	41928	44282	.	-	0	ID=cds-WP_000746151.1;Parent=gene-AC56_RS21635;Dbxref=GenBank:WP_000746151.1;Name=WP_000746151.1;Ontology_term=GO:0015920,GO:0043165,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414596.1;locus_tag=AC56_RS21635;product=LPS assembly protein LptD;protein_id=WP_000746151.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	44537	45352	.	+	.	ID=gene-AC56_RS21630;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=AC56_RS21630;old_locus_tag=AC56_0042
NZ_JJLS01000101.1	Protein Homology	CDS	44537	45352	.	+	0	ID=cds-WP_001200573.1;Parent=gene-AC56_RS21630;Dbxref=GenBank:WP_001200573.1;Name=WP_001200573.1;Ontology_term=GO:0051087;gbkey=CDS;gene=djlA;go_function=protein-folding chaperone binding|0051087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308087.1;locus_tag=AC56_RS21630;product=co-chaperone DjlA;protein_id=WP_001200573.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	45468	46127	.	-	.	ID=gene-AC56_RS21625;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=AC56_RS21625;old_locus_tag=AC56_0043
NZ_JJLS01000101.1	Protein Homology	CDS	45468	46127	.	-	0	ID=cds-WP_000525176.1;Parent=gene-AC56_RS21625;Dbxref=GenBank:WP_000525176.1;Name=WP_000525176.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414600.1;locus_tag=AC56_RS21625;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=WP_000525176.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	46139	49045	.	-	.	ID=gene-AC56_RS21620;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=AC56_RS21620;old_locus_tag=AC56_0044
NZ_JJLS01000101.1	Protein Homology	CDS	46139	49045	.	-	0	ID=cds-WP_001117011.1;Parent=gene-AC56_RS21620;Dbxref=GenBank:WP_001117011.1;Name=WP_001117011.1;Ontology_term=GO:0006355,GO:0005524,GO:0016817,GO:0140658;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides|0016817||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1;locus_tag=AC56_RS21620;product=RNA polymerase-associated protein RapA;protein_id=WP_001117011.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	49209	51560	.	-	.	ID=gene-AC56_RS21615;Name=polB;gbkey=Gene;gene=polB;gene_biotype=protein_coding;locus_tag=AC56_RS21615;old_locus_tag=AC56_0045
NZ_JJLS01000101.1	Protein Homology	CDS	49209	51560	.	-	0	ID=cds-WP_000035698.1;Parent=gene-AC56_RS21615;Dbxref=GenBank:WP_000035698.1;Name=WP_000035698.1;Ontology_term=GO:0003677,GO:0003887;gbkey=CDS;gene=polB;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308091.1;locus_tag=AC56_RS21615;product=DNA polymerase II;protein_id=WP_000035698.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	51635	52330	.	-	.	ID=gene-AC56_RS21610;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=AC56_RS21610;old_locus_tag=AC56_0046
NZ_JJLS01000101.1	Protein Homology	CDS	51635	52330	.	-	0	ID=cds-WP_032277596.1;Parent=gene-AC56_RS21610;Dbxref=GenBank:WP_032277596.1;Name=WP_032277596.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308092.1;locus_tag=AC56_RS21610;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_032277596.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	52615	54117	.	-	.	ID=gene-AC56_RS21605;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=AC56_RS21605;old_locus_tag=AC56_0047
NZ_JJLS01000101.1	Protein Homology	CDS	52615	54117	.	-	0	ID=cds-WP_000151734.1;Parent=gene-AC56_RS21605;Dbxref=GenBank:WP_000151734.1;Name=WP_000151734.1;Ontology_term=GO:0005996,GO:0008733;gbkey=CDS;gene=araA;go_function=L-arabinose isomerase activity|0008733||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308093.1;locus_tag=AC56_RS21605;product=L-arabinose isomerase;protein_id=WP_000151734.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	54128	55828	.	-	.	ID=gene-AC56_RS21600;Name=araB;gbkey=Gene;gene=araB;gene_biotype=protein_coding;locus_tag=AC56_RS21600;old_locus_tag=AC56_0048
NZ_JJLS01000101.1	Protein Homology	CDS	54128	55828	.	-	0	ID=cds-WP_032277811.1;Parent=gene-AC56_RS21600;Dbxref=GenBank:WP_032277811.1;Name=WP_032277811.1;Ontology_term=GO:0019568,GO:0005524,GO:0008741;gbkey=CDS;gene=araB;go_function=ATP binding|0005524||IEA,ribulokinase activity|0008741||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706016.1;locus_tag=AC56_RS21600;product=ribulokinase;protein_id=WP_032277811.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	56167	57045	.	+	.	ID=gene-AC56_RS21595;Name=araC;gbkey=Gene;gene=araC;gene_biotype=protein_coding;locus_tag=AC56_RS21595;old_locus_tag=AC56_0049
NZ_JJLS01000101.1	Protein Homology	CDS	56167	57045	.	+	0	ID=cds-WP_001300811.1;Parent=gene-AC56_RS21595;Dbxref=GenBank:WP_001300811.1;Name=WP_001300811.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=araC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308095.1;locus_tag=AC56_RS21595;product=arabinose operon transcriptional regulator AraC;protein_id=WP_001300811.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	pseudogene	57131	57896	.	+	.	ID=gene-AC56_RS21590;Name=yabI;gbkey=Gene;gene=yabI;gene_biotype=pseudogene;locus_tag=AC56_RS21590;old_locus_tag=AC56_0050;pseudo=true
NZ_JJLS01000101.1	Protein Homology	CDS	57131	57896	.	+	0	ID=cds-AC56_RS21590;Parent=gene-AC56_RS21590;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;gene=yabI;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706018.1;locus_tag=AC56_RS21590;product=DedA family protein;pseudo=true;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	58010	58708	.	-	.	ID=gene-AC56_RS21585;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=AC56_RS21585;old_locus_tag=AC56_0051
NZ_JJLS01000101.1	Protein Homology	CDS	58010	58708	.	-	0	ID=cds-WP_000916291.1;Parent=gene-AC56_RS21585;Dbxref=GenBank:WP_000916291.1;Name=WP_000916291.1;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308097.1;locus_tag=AC56_RS21585;product=thiamine ABC transporter ATP-binding protein ThiQ;protein_id=WP_000916291.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	58692	60302	.	-	.	ID=gene-AC56_RS21580;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=AC56_RS21580;old_locus_tag=AC56_0052
NZ_JJLS01000101.1	Protein Homology	CDS	58692	60302	.	-	0	ID=cds-WP_000235688.1;Parent=gene-AC56_RS21580;Dbxref=GenBank:WP_000235688.1;Name=WP_000235688.1;gbkey=CDS;gene=thiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706020.1;locus_tag=AC56_RS21580;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=WP_000235688.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	60278	61261	.	-	.	ID=gene-AC56_RS21575;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=AC56_RS21575;old_locus_tag=AC56_0053
NZ_JJLS01000101.1	Protein Homology	CDS	60278	61261	.	-	0	ID=cds-WP_001300656.1;Parent=gene-AC56_RS21575;Dbxref=GenBank:WP_001300656.1;Name=WP_001300656.1;Ontology_term=GO:0015888,GO:0030975,GO:0048502,GO:0030288,GO:0055052;gbkey=CDS;gene=thiB;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=thiamine binding|0030975||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414610.1;locus_tag=AC56_RS21575;product=thiamine ABC transporter substrate binding subunit;protein_id=WP_001300656.1;transl_table=11
NZ_JJLS01000101.1	cmsearch	riboswitch	61292	61391	.	-	.	ID=id-NZ_JJLS01000101.1:61292..61391;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_JJLS01000101.1	RefSeq	gene	61425	63080	.	-	.	ID=gene-AC56_RS21570;Name=sgrR;gbkey=Gene;gene=sgrR;gene_biotype=protein_coding;locus_tag=AC56_RS21570;old_locus_tag=AC56_0055
NZ_JJLS01000101.1	Protein Homology	CDS	61425	63080	.	-	0	ID=cds-WP_001295535.1;Parent=gene-AC56_RS21570;Dbxref=GenBank:WP_001295535.1;Name=WP_001295535.1;gbkey=CDS;gene=sgrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706022.2;locus_tag=AC56_RS21570;product=DNA-binding transcriptional regulator SgrR;protein_id=WP_001295535.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	63169	63300	.	+	.	ID=gene-AC56_RS21565;Name=sgrT;gbkey=Gene;gene=sgrT;gene_biotype=protein_coding;locus_tag=AC56_RS21565;old_locus_tag=AC56_0056
NZ_JJLS01000101.1	Protein Homology	CDS	63169	63300	.	+	0	ID=cds-WP_001248770.1;Parent=gene-AC56_RS21565;Dbxref=GenBank:WP_001248770.1;Name=WP_001248770.1;Ontology_term=GO:0046325;gbkey=CDS;gene=sgrT;go_process=negative regulation of D-glucose import|0046325||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791237.1;locus_tag=AC56_RS21565;product=glucose uptake inhibitor SgrT;protein_id=WP_001248770.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	63402	64580	.	+	.	ID=gene-AC56_RS21560;Name=setA;gbkey=Gene;gene=setA;gene_biotype=protein_coding;locus_tag=AC56_RS21560;old_locus_tag=AC56_0057
NZ_JJLS01000101.1	Protein Homology	CDS	63402	64580	.	+	0	ID=cds-WP_000637848.1;Parent=gene-AC56_RS21560;Dbxref=GenBank:WP_000637848.1;Name=WP_000637848.1;gbkey=CDS;gene=setA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025293.1;locus_tag=AC56_RS21560;product=sugar efflux transporter SetA;protein_id=WP_000637848.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	64629	65234	.	-	.	ID=gene-AC56_RS21555;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=AC56_RS21555;old_locus_tag=AC56_0058
NZ_JJLS01000101.1	Protein Homology	CDS	64629	65234	.	-	0	ID=cds-WP_000818228.1;Parent=gene-AC56_RS21555;Dbxref=GenBank:WP_000818228.1;Name=WP_000818228.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414613.1;locus_tag=AC56_RS21555;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_000818228.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	65245	66645	.	-	.	ID=gene-AC56_RS21550;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=AC56_RS21550;old_locus_tag=AC56_0059
NZ_JJLS01000101.1	Protein Homology	CDS	65245	66645	.	-	0	ID=cds-WP_001140641.1;Parent=gene-AC56_RS21550;Dbxref=GenBank:WP_001140641.1;Name=WP_001140641.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414614.1;locus_tag=AC56_RS21550;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_001140641.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	66648	67739	.	-	.	ID=gene-AC56_RS21545;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=AC56_RS21545;old_locus_tag=AC56_0060
NZ_JJLS01000101.1	Protein Homology	CDS	66648	67739	.	-	0	ID=cds-WP_000042353.1;Parent=gene-AC56_RS21545;Dbxref=GenBank:WP_000042353.1;Name=WP_000042353.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124544.1;locus_tag=AC56_RS21545;product=3-isopropylmalate dehydrogenase;protein_id=WP_000042353.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	67739	69310	.	-	.	ID=gene-AC56_RS21540;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=AC56_RS21540;old_locus_tag=AC56_0061
NZ_JJLS01000101.1	Protein Homology	CDS	67739	69310	.	-	0	ID=cds-WP_000082846.1;Parent=gene-AC56_RS21540;Dbxref=GenBank:WP_000082846.1;Name=WP_000082846.1;Ontology_term=GO:0019752,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831521.1;locus_tag=AC56_RS21540;product=2-isopropylmalate synthase;protein_id=WP_000082846.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	69403	69489	.	-	.	ID=gene-AC56_RS0125130;Name=leuL;gbkey=Gene;gene=leuL;gene_biotype=protein_coding;locus_tag=AC56_RS0125130
NZ_JJLS01000101.1	Protein Homology	CDS	69403	69489	.	-	0	ID=cds-WP_001300467.1;Parent=gene-AC56_RS0125130;Dbxref=GenBank:WP_001300467.1;Name=WP_001300467.1;gbkey=CDS;gene=leuL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308106.1;locus_tag=AC56_RS0125130;product=leu operon leader peptide;protein_id=WP_001300467.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	pseudogene	70154	71097	.	+	.	ID=gene-AC56_RS0125135;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=pseudogene;locus_tag=AC56_RS0125135;old_locus_tag=AC56_0063;pseudo=true
NZ_JJLS01000101.1	Protein Homology	CDS	70154	71097	.	+	0	ID=cds-AC56_RS0125135;Parent=gene-AC56_RS0125135;Note=frameshifted;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=leuO;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414618.4;locus_tag=AC56_RS0125135;product=transcriptional regulator LeuO;pseudo=true;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	71252	71296	.	-	.	ID=gene-AC56_RS32605;Name=AC56_RS32605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS32605
NZ_JJLS01000101.1	Protein Homology	CDS	71252	71296	.	-	0	ID=cds-WP_120795371.1;Parent=gene-AC56_RS32605;Dbxref=GenBank:WP_120795371.1;Name=WP_120795371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518736.1;locus_tag=AC56_RS32605;product=protein YabR;protein_id=WP_120795371.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	71415	73139	.	+	.	ID=gene-AC56_RS21535;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=AC56_RS21535;old_locus_tag=AC56_0065
NZ_JJLS01000101.1	Protein Homology	CDS	71415	73139	.	+	0	ID=cds-WP_001295534.1;Parent=gene-AC56_RS21535;Dbxref=GenBank:WP_001295534.1;Name=WP_001295534.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvI;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079613.1;locus_tag=AC56_RS21535;product=acetolactate synthase 3 large subunit;protein_id=WP_001295534.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	73142	73633	.	+	.	ID=gene-AC56_RS21530;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=AC56_RS21530;old_locus_tag=AC56_0066
NZ_JJLS01000101.1	Protein Homology	CDS	73142	73633	.	+	0	ID=cds-WP_001300383.1;Parent=gene-AC56_RS21530;Dbxref=GenBank:WP_001300383.1;Name=WP_001300383.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563086.1;locus_tag=AC56_RS21530;product=acetolactate synthase small subunit;protein_id=WP_001300383.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	73645	73731	.	+	.	ID=gene-AC56_RS0125140;Name=AC56_RS0125140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0125140
NZ_JJLS01000101.1	Protein Homology	CDS	73645	73731	.	+	0	ID=cds-WP_001303787.1;Parent=gene-AC56_RS0125140;Dbxref=GenBank:WP_001303787.1;Name=WP_001303787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308110.1;locus_tag=AC56_RS0125140;product=fruR/shl operon leader peptide;protein_id=WP_001303787.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	73813	74817	.	+	.	ID=gene-AC56_RS21525;Name=cra;gbkey=Gene;gene=cra;gene_biotype=protein_coding;locus_tag=AC56_RS21525;old_locus_tag=AC56_0067
NZ_JJLS01000101.1	Protein Homology	CDS	73813	74817	.	+	0	ID=cds-WP_032197735.1;Parent=gene-AC56_RS21525;Dbxref=GenBank:WP_032197735.1;Name=WP_032197735.1;Ontology_term=GO:0006355,GO:0009750,GO:0003677;gbkey=CDS;gene=cra;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to fructose|0009750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308111.1;locus_tag=AC56_RS21525;product=catabolite repressor/activator;protein_id=WP_032197735.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	75419	75877	.	+	.	ID=gene-AC56_RS21520;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=AC56_RS21520;old_locus_tag=AC56_0069
NZ_JJLS01000101.1	Protein Homology	CDS	75419	75877	.	+	0	ID=cds-WP_001295770.1;Parent=gene-AC56_RS21520;Dbxref=GenBank:WP_001295770.1;Name=WP_001295770.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020325403.1;locus_tag=AC56_RS21520;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_001295770.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	75879	76820	.	+	.	ID=gene-AC56_RS21515;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=AC56_RS21515;old_locus_tag=AC56_0070
NZ_JJLS01000101.1	Protein Homology	CDS	75879	76820	.	+	0	ID=cds-WP_000970479.1;Parent=gene-AC56_RS21515;Dbxref=GenBank:WP_000970479.1;Name=WP_000970479.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124563.1;locus_tag=AC56_RS21515;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_000970479.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	76817	77182	.	+	.	ID=gene-AC56_RS21510;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=AC56_RS21510;old_locus_tag=AC56_0071
NZ_JJLS01000101.1	Protein Homology	CDS	76817	77182	.	+	0	ID=cds-WP_000625658.1;Parent=gene-AC56_RS21510;Dbxref=GenBank:WP_000625658.1;Name=WP_000625658.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625658.1;locus_tag=AC56_RS21510;product=cell division protein FtsL;protein_id=WP_000625658.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	77198	78964	.	+	.	ID=gene-AC56_RS21505;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=AC56_RS21505;old_locus_tag=AC56_0072
NZ_JJLS01000101.1	Protein Homology	CDS	77198	78964	.	+	0	ID=cds-WP_000642196.1;Parent=gene-AC56_RS21505;Dbxref=GenBank:WP_000642196.1;Name=WP_000642196.1;gbkey=CDS;gene=ftsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642204.1;locus_tag=AC56_RS21505;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_000642196.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	78951	80438	.	+	.	ID=gene-AC56_RS21500;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=AC56_RS21500;old_locus_tag=AC56_0073
NZ_JJLS01000101.1	Protein Homology	CDS	78951	80438	.	+	0	ID=cds-WP_032277814.1;Parent=gene-AC56_RS21500;Dbxref=GenBank:WP_032277814.1;Name=WP_032277814.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414627.1;locus_tag=AC56_RS21500;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_032277814.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	80435	81793	.	+	.	ID=gene-AC56_RS21495;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=AC56_RS21495;old_locus_tag=AC56_0074
NZ_JJLS01000101.1	Protein Homology	CDS	80435	81793	.	+	0	ID=cds-WP_000626688.1;Parent=gene-AC56_RS21495;Dbxref=GenBank:WP_000626688.1;Name=WP_000626688.1;Ontology_term=GO:0009058,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=biosynthetic process|0009058||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414628.1;locus_tag=AC56_RS21495;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_000626688.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	81787	82869	.	+	.	ID=gene-AC56_RS21490;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=AC56_RS21490;old_locus_tag=AC56_0075
NZ_JJLS01000101.1	Protein Homology	CDS	81787	82869	.	+	0	ID=cds-WP_000964131.1;Parent=gene-AC56_RS21490;Dbxref=GenBank:WP_000964131.1;Name=WP_000964131.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=AC56_RS21490;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_000964131.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	82872	84188	.	+	.	ID=gene-AC56_RS21485;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=AC56_RS21485;old_locus_tag=AC56_0076
NZ_JJLS01000101.1	Protein Homology	CDS	82872	84188	.	+	0	ID=cds-WP_000796481.1;Parent=gene-AC56_RS21485;Dbxref=GenBank:WP_000796481.1;Name=WP_000796481.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124612.1;locus_tag=AC56_RS21485;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_000796481.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	84188	85432	.	+	.	ID=gene-AC56_RS21480;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=AC56_RS21480;old_locus_tag=AC56_0077
NZ_JJLS01000101.1	Protein Homology	CDS	84188	85432	.	+	0	ID=cds-WP_001295532.1;Parent=gene-AC56_RS21480;Dbxref=GenBank:WP_001295532.1;Name=WP_001295532.1;Ontology_term=GO:0051301;gbkey=CDS;gene=ftsW;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308120.1;locus_tag=AC56_RS21480;product=cell division protein FtsW;protein_id=WP_001295532.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	85429	86496	.	+	.	ID=gene-AC56_RS21475;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=AC56_RS21475;old_locus_tag=AC56_0078
NZ_JJLS01000101.1	Protein Homology	CDS	85429	86496	.	+	0	ID=cds-WP_000016560.1;Parent=gene-AC56_RS21475;Dbxref=GenBank:WP_000016560.1;Name=WP_000016560.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414632.1;locus_tag=AC56_RS21475;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_000016560.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	86550	88025	.	+	.	ID=gene-AC56_RS21470;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=AC56_RS21470;old_locus_tag=AC56_0079
NZ_JJLS01000101.1	Protein Homology	CDS	86550	88025	.	+	0	ID=cds-WP_032216583.1;Parent=gene-AC56_RS21470;Dbxref=GenBank:WP_032216583.1;Name=WP_032216583.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308122.1;locus_tag=AC56_RS21470;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_032216583.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	88018	88938	.	+	.	ID=gene-AC56_RS21465;Name=ddlB;gbkey=Gene;gene=ddlB;gene_biotype=protein_coding;locus_tag=AC56_RS21465;old_locus_tag=AC56_0080
NZ_JJLS01000101.1	Protein Homology	CDS	88018	88938	.	+	0	ID=cds-WP_032277815.1;Parent=gene-AC56_RS21465;Dbxref=GenBank:WP_032277815.1;Name=WP_032277815.1;gbkey=CDS;gene=ddlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414634.1;locus_tag=AC56_RS21465;product=D-alanine--D-alanine ligase;protein_id=WP_032277815.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	88940	89770	.	+	.	ID=gene-AC56_RS21460;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=AC56_RS21460;old_locus_tag=AC56_0081
NZ_JJLS01000101.1	Protein Homology	CDS	88940	89770	.	+	0	ID=cds-WP_032277817.1;Parent=gene-AC56_RS21460;Dbxref=GenBank:WP_032277817.1;Name=WP_032277817.1;Ontology_term=GO:0090529;gbkey=CDS;gene=ftsQ;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308124.1;locus_tag=AC56_RS21460;product=cell division protein FtsQ;protein_id=WP_032277817.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	89767	91029	.	+	.	ID=gene-AC56_RS21455;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=AC56_RS21455;old_locus_tag=AC56_0082
NZ_JJLS01000101.1	Protein Homology	CDS	89767	91029	.	+	0	ID=cds-WP_001425111.1;Parent=gene-AC56_RS21455;Dbxref=GenBank:WP_001425111.1;Name=WP_001425111.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308125.1;locus_tag=AC56_RS21455;product=cell division protein FtsA;protein_id=WP_001425111.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	91090	92241	.	+	.	ID=gene-AC56_RS21450;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=AC56_RS21450;old_locus_tag=AC56_0083
NZ_JJLS01000101.1	Protein Homology	CDS	91090	92241	.	+	0	ID=cds-WP_000462776.1;Parent=gene-AC56_RS21450;Dbxref=GenBank:WP_000462776.1;Name=WP_000462776.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=AC56_RS21450;product=cell division protein FtsZ;protein_id=WP_000462776.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	92342	93259	.	+	.	ID=gene-AC56_RS21445;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=AC56_RS21445;old_locus_tag=AC56_0084
NZ_JJLS01000101.1	Protein Homology	CDS	92342	93259	.	+	0	ID=cds-WP_032277818.1;Parent=gene-AC56_RS21445;Dbxref=GenBank:WP_032277818.1;Name=WP_032277818.1;Ontology_term=GO:0009245,GO:0103117;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-acyl-N-acetylglucosamine deacetylase activity|0103117||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308127.1;locus_tag=AC56_RS21445;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_032277818.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	93490	94002	.	+	.	ID=gene-AC56_RS21440;Name=secM;gbkey=Gene;gene=secM;gene_biotype=protein_coding;locus_tag=AC56_RS21440;old_locus_tag=AC56_0085
NZ_JJLS01000101.1	Protein Homology	CDS	93490	94002	.	+	0	ID=cds-WP_000014320.1;Parent=gene-AC56_RS21440;Dbxref=GenBank:WP_000014320.1;Name=WP_000014320.1;Ontology_term=GO:0045182;gbkey=CDS;gene=secM;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308128.2;locus_tag=AC56_RS21440;product=secA translation cis-regulator SecM;protein_id=WP_000014320.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	94064	96769	.	+	.	ID=gene-AC56_RS21435;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=AC56_RS21435;old_locus_tag=AC56_0086
NZ_JJLS01000101.1	Protein Homology	CDS	94064	96769	.	+	0	ID=cds-WP_000905780.1;Parent=gene-AC56_RS21435;Dbxref=GenBank:WP_000905780.1;Name=WP_000905780.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308129.1;locus_tag=AC56_RS21435;product=preprotein translocase subunit SecA;protein_id=WP_000905780.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	96829	97218	.	+	.	ID=gene-AC56_RS21430;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=AC56_RS21430;old_locus_tag=AC56_0087
NZ_JJLS01000101.1	Protein Homology	CDS	96829	97218	.	+	0	ID=cds-WP_000736009.1;Parent=gene-AC56_RS21430;Dbxref=GenBank:WP_000736009.1;Name=WP_000736009.1;Ontology_term=GO:0006281,GO:0008413;gbkey=CDS;gene=mutT;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414641.1;locus_tag=AC56_RS21430;product=8-oxo-dGTP diphosphatase MutT;protein_id=WP_000736009.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	97434	97631	.	-	.	ID=gene-AC56_RS21425;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=AC56_RS21425;old_locus_tag=AC56_0088
NZ_JJLS01000101.1	Protein Homology	CDS	97434	97631	.	-	0	ID=cds-WP_000005042.1;Parent=gene-AC56_RS21425;Dbxref=GenBank:WP_000005042.1;Name=WP_000005042.1;Ontology_term=GO:0006355,GO:0008270;gbkey=CDS;gene=yacG;go_function=zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308132.1;locus_tag=AC56_RS21425;product=DNA gyrase inhibitor YacG;protein_id=WP_000005042.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	97641	98384	.	-	.	ID=gene-AC56_RS21420;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=AC56_RS21420;old_locus_tag=AC56_0089
NZ_JJLS01000101.1	Protein Homology	CDS	97641	98384	.	-	0	ID=cds-WP_001194722.1;Parent=gene-AC56_RS21420;Dbxref=GenBank:WP_001194722.1;Name=WP_001194722.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414644.1;locus_tag=AC56_RS21420;product=cell division protein ZapD;protein_id=WP_001194722.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	98384	99004	.	-	.	ID=gene-AC56_RS21415;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=AC56_RS21415;old_locus_tag=AC56_0090
NZ_JJLS01000101.1	Protein Homology	CDS	98384	99004	.	-	0	ID=cds-WP_001269527.1;Parent=gene-AC56_RS21415;Dbxref=GenBank:WP_001269527.1;Name=WP_001269527.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308134.1;locus_tag=AC56_RS21415;product=dephospho-CoA kinase;protein_id=WP_001269527.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	99029	99073	.	+	.	ID=gene-AC56_RS32940;Name=AC56_RS32940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS32940
NZ_JJLS01000101.1	Protein Homology	CDS	99029	99073	.	+	0	ID=cds-WP_120795372.1;Parent=gene-AC56_RS32940;Dbxref=GenBank:WP_120795372.1;Name=WP_120795372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518737.1;locus_tag=AC56_RS32940;product=protein YacM;protein_id=WP_120795372.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	99229	100272	.	+	.	ID=gene-AC56_RS21410;Name=guaC;gbkey=Gene;gene=guaC;gene_biotype=protein_coding;locus_tag=AC56_RS21410;old_locus_tag=AC56_0091
NZ_JJLS01000101.1	Protein Homology	CDS	99229	100272	.	+	0	ID=cds-WP_001217338.1;Parent=gene-AC56_RS21410;Dbxref=GenBank:WP_001217338.1;Name=WP_001217338.1;Ontology_term=GO:0009117,GO:0003920,GO:1902560;gbkey=CDS;gene=guaC;go_component=GMP reductase complex|1902560||IEA;go_function=GMP reductase activity|0003920||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008461816.1;locus_tag=AC56_RS21410;product=GMP reductase;protein_id=WP_001217338.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	100307	101509	.	-	.	ID=gene-AC56_RS21405;Name=hofC;gbkey=Gene;gene=hofC;gene_biotype=protein_coding;locus_tag=AC56_RS21405;old_locus_tag=AC56_0092
NZ_JJLS01000101.1	Protein Homology	CDS	100307	101509	.	-	0	ID=cds-WP_032277820.1;Parent=gene-AC56_RS21405;Dbxref=GenBank:WP_032277820.1;Name=WP_032277820.1;Ontology_term=GO:0004827;gbkey=CDS;gene=hofC;go_function=proline-tRNA ligase activity|0004827||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414648.1;locus_tag=AC56_RS21405;product=protein transport protein HofC;protein_id=WP_032277820.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	101499	102884	.	-	.	ID=gene-AC56_RS21400;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=AC56_RS21400;old_locus_tag=AC56_0093
NZ_JJLS01000101.1	Protein Homology	CDS	101499	102884	.	-	0	ID=cds-WP_001025193.1;Parent=gene-AC56_RS21400;Dbxref=GenBank:WP_001025193.1;Name=WP_001025193.1;gbkey=CDS;gene=gspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308138.1;locus_tag=AC56_RS21400;product=type II secretion system protein GspE;protein_id=WP_001025193.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	102894	103334	.	-	.	ID=gene-AC56_RS21395;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=AC56_RS21395;old_locus_tag=AC56_0094
NZ_JJLS01000101.1	Protein Homology	CDS	102894	103334	.	-	0	ID=cds-WP_032277822.1;Parent=gene-AC56_RS21395;Dbxref=GenBank:WP_032277822.1;Name=WP_032277822.1;gbkey=CDS;gene=ppdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308139.1;locus_tag=AC56_RS21395;product=prepilin peptidase-dependent pilin;protein_id=WP_032277822.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	103534	104427	.	-	.	ID=gene-AC56_RS21390;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=AC56_RS21390;old_locus_tag=AC56_0095
NZ_JJLS01000101.1	Protein Homology	CDS	103534	104427	.	-	0	ID=cds-WP_001514911.1;Parent=gene-AC56_RS21390;Dbxref=GenBank:WP_001514911.1;Name=WP_001514911.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308140.1;locus_tag=AC56_RS21390;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_001514911.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	104515	105066	.	+	.	ID=gene-AC56_RS21385;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=AC56_RS21385;old_locus_tag=AC56_0096
NZ_JJLS01000101.1	Protein Homology	CDS	104515	105066	.	+	0	ID=cds-WP_000923727.1;Parent=gene-AC56_RS21385;Dbxref=GenBank:WP_000923727.1;Name=WP_000923727.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308141.1;locus_tag=AC56_RS21385;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WP_000923727.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	105063	105917	.	+	.	ID=gene-AC56_RS21380;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;locus_tag=AC56_RS21380;old_locus_tag=AC56_0097
NZ_JJLS01000101.1	Protein Homology	CDS	105063	105917	.	+	0	ID=cds-WP_000172005.1;Parent=gene-AC56_RS21380;Dbxref=GenBank:WP_000172005.1;Name=WP_000172005.1;gbkey=CDS;gene=ampE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414653.1;locus_tag=AC56_RS21380;product=beta-lactamase regulator AmpE;protein_id=WP_000172005.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	105960	107333	.	-	.	ID=gene-AC56_RS21375;Name=aroP;gbkey=Gene;gene=aroP;gene_biotype=protein_coding;locus_tag=AC56_RS21375;old_locus_tag=AC56_0098
NZ_JJLS01000101.1	Protein Homology	CDS	105960	107333	.	-	0	ID=cds-WP_000969915.1;Parent=gene-AC56_RS21375;Dbxref=GenBank:WP_000969915.1;Name=WP_000969915.1;Ontology_term=GO:0006865;gbkey=CDS;gene=aroP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414654.1;locus_tag=AC56_RS21375;product=aromatic amino acid transporter AroP;protein_id=WP_000969915.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	107874	108638	.	+	.	ID=gene-AC56_RS21370;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=AC56_RS21370;old_locus_tag=AC56_0099
NZ_JJLS01000101.1	Protein Homology	CDS	107874	108638	.	+	0	ID=cds-WP_000331776.1;Parent=gene-AC56_RS21370;Dbxref=GenBank:WP_000331776.1;Name=WP_000331776.1;gbkey=CDS;gene=pdhR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308144.1;locus_tag=AC56_RS21370;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=WP_000331776.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	108799	111462	.	+	.	ID=gene-AC56_RS21365;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=AC56_RS21365;old_locus_tag=AC56_0100
NZ_JJLS01000101.1	Protein Homology	CDS	108799	111462	.	+	0	ID=cds-WP_000003820.1;Parent=gene-AC56_RS21365;Dbxref=GenBank:WP_000003820.1;Name=WP_000003820.1;Ontology_term=GO:0006086,GO:0004738,GO:0045254;gbkey=CDS;gene=aceE;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase activity|0004738||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814576.1;locus_tag=AC56_RS21365;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_000003820.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	111477	113369	.	+	.	ID=gene-AC56_RS21360;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=AC56_RS21360;old_locus_tag=AC56_0101
NZ_JJLS01000101.1	Protein Homology	CDS	111477	113369	.	+	0	ID=cds-WP_000963518.1;Parent=gene-AC56_RS21360;Dbxref=GenBank:WP_000963518.1;Name=WP_000963518.1;Ontology_term=GO:0006096,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414657.1;locus_tag=AC56_RS21360;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_000963518.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	113694	115118	.	+	.	ID=gene-AC56_RS21355;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=AC56_RS21355;old_locus_tag=AC56_0102
NZ_JJLS01000101.1	Protein Homology	CDS	113694	115118	.	+	0	ID=cds-WP_032282537.1;Parent=gene-AC56_RS21355;Dbxref=GenBank:WP_032282537.1;Name=WP_032282537.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738005.1;locus_tag=AC56_RS21355;product=dihydrolipoyl dehydrogenase;protein_id=WP_032282537.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	115189	117042	.	-	.	ID=gene-AC56_RS21350;Name=yacH;gbkey=Gene;gene=yacH;gene_biotype=protein_coding;locus_tag=AC56_RS21350;old_locus_tag=AC56_0103
NZ_JJLS01000101.1	Protein Homology	CDS	115189	117042	.	-	0	ID=cds-WP_032277824.1;Parent=gene-AC56_RS21350;Dbxref=GenBank:WP_032277824.1;Name=WP_032277824.1;gbkey=CDS;gene=yacH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414659.1;locus_tag=AC56_RS21350;product=DUF3300 domain-containing protein;protein_id=WP_032277824.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	117397	119994	.	+	.	ID=gene-AC56_RS21345;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=AC56_RS21345;old_locus_tag=AC56_0104
NZ_JJLS01000101.1	Protein Homology	CDS	117397	119994	.	+	0	ID=cds-WP_001307570.1;Parent=gene-AC56_RS21345;Dbxref=GenBank:WP_001307570.1;Name=WP_001307570.1;Ontology_term=GO:0006099,GO:0003994,GO:0051539,GO:0005829;gbkey=CDS;gene=acnB;go_component=cytosol|0005829||IEA;go_function=aconitate hydratase activity|0003994||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414660.1;locus_tag=AC56_RS21345;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_001307570.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	120170	120532	.	+	.	ID=gene-AC56_RS21340;Name=yacL;gbkey=Gene;gene=yacL;gene_biotype=protein_coding;locus_tag=AC56_RS21340;old_locus_tag=AC56_0105
NZ_JJLS01000101.1	Protein Homology	CDS	120170	120532	.	+	0	ID=cds-WP_000384306.1;Parent=gene-AC56_RS21340;Dbxref=GenBank:WP_000384306.1;Name=WP_000384306.1;gbkey=CDS;gene=yacL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414661.2;locus_tag=AC56_RS21340;product=protein YacL;protein_id=WP_000384306.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	120570	121364	.	-	.	ID=gene-AC56_RS21335;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=AC56_RS21335;old_locus_tag=AC56_0106
NZ_JJLS01000101.1	Protein Homology	CDS	120570	121364	.	-	0	ID=cds-WP_000734287.1;Parent=gene-AC56_RS21335;Dbxref=GenBank:WP_000734287.1;Name=WP_000734287.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308151.1;locus_tag=AC56_RS21335;product=adenosylmethionine decarboxylase;protein_id=WP_000734287.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	121380	122246	.	-	.	ID=gene-AC56_RS21330;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=AC56_RS21330;old_locus_tag=AC56_0107
NZ_JJLS01000101.1	Protein Homology	CDS	121380	122246	.	-	0	ID=cds-WP_000818411.1;Parent=gene-AC56_RS21330;Dbxref=GenBank:WP_000818411.1;Name=WP_000818411.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414663.1;locus_tag=AC56_RS21330;product=polyamine aminopropyltransferase;protein_id=WP_000818411.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	122352	122699	.	-	.	ID=gene-AC56_RS21325;Name=yacC;gbkey=Gene;gene=yacC;gene_biotype=protein_coding;locus_tag=AC56_RS21325;old_locus_tag=AC56_0108
NZ_JJLS01000101.1	Protein Homology	CDS	122352	122699	.	-	0	ID=cds-WP_001295568.1;Parent=gene-AC56_RS21325;Dbxref=GenBank:WP_001295568.1;Name=WP_001295568.1;gbkey=CDS;gene=yacC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414664.4;locus_tag=AC56_RS21325;product=YacC family pilotin-like protein;protein_id=WP_001295568.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	122865	124415	.	+	.	ID=gene-AC56_RS21320;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=protein_coding;locus_tag=AC56_RS21320;old_locus_tag=AC56_0109
NZ_JJLS01000101.1	Protein Homology	CDS	122865	124415	.	+	0	ID=cds-WP_001189647.1;Parent=gene-AC56_RS21320;Dbxref=GenBank:WP_001189647.1;Name=WP_001189647.1;Ontology_term=GO:0005507,GO:0016491;gbkey=CDS;gene=cueO;go_function=copper ion binding|0005507||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414665.1;locus_tag=AC56_RS21320;product=multicopper oxidase CueO;protein_id=WP_001189647.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	124617	127007	.	-	.	ID=gene-AC56_RS21315;Name=gcd;gbkey=Gene;gene=gcd;gene_biotype=protein_coding;locus_tag=AC56_RS21315;old_locus_tag=AC56_0110
NZ_JJLS01000101.1	Protein Homology	CDS	124617	127007	.	-	0	ID=cds-WP_001297052.1;Parent=gene-AC56_RS21315;Dbxref=GenBank:WP_001297052.1;Name=WP_001297052.1;gbkey=CDS;gene=gcd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308155.1;locus_tag=AC56_RS21315;product=quinoprotein glucose dehydrogenase;protein_id=WP_001297052.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	127213	127749	.	+	.	ID=gene-AC56_RS21310;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=AC56_RS21310;old_locus_tag=AC56_0111
NZ_JJLS01000101.1	Protein Homology	CDS	127213	127749	.	+	0	ID=cds-WP_000683335.1;Parent=gene-AC56_RS21310;Dbxref=GenBank:WP_000683335.1;Name=WP_000683335.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204384.1;locus_tag=AC56_RS21310;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_000683335.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	127790	128452	.	-	.	ID=gene-AC56_RS21305;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=AC56_RS21305;old_locus_tag=AC56_0112
NZ_JJLS01000101.1	Protein Homology	CDS	127790	128452	.	-	0	ID=cds-WP_000651599.1;Parent=gene-AC56_RS21305;Dbxref=GenBank:WP_000651599.1;Name=WP_000651599.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414668.1;locus_tag=AC56_RS21305;product=carbonate dehydratase;protein_id=WP_000651599.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	128561	129487	.	+	.	ID=gene-AC56_RS21300;Name=yadG;gbkey=Gene;gene=yadG;gene_biotype=protein_coding;locus_tag=AC56_RS21300;old_locus_tag=AC56_0113
NZ_JJLS01000101.1	Protein Homology	CDS	128561	129487	.	+	0	ID=cds-WP_000150637.1;Parent=gene-AC56_RS21300;Dbxref=GenBank:WP_000150637.1;Name=WP_000150637.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;gene=yadG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414669.1;locus_tag=AC56_RS21300;product=ABC transporter ATP-binding protein;protein_id=WP_000150637.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	129484	130254	.	+	.	ID=gene-AC56_RS21295;Name=yadH;gbkey=Gene;gene=yadH;gene_biotype=protein_coding;locus_tag=AC56_RS21295;old_locus_tag=AC56_0114
NZ_JJLS01000101.1	Protein Homology	CDS	129484	130254	.	+	0	ID=cds-WP_000972203.1;Parent=gene-AC56_RS21295;Dbxref=GenBank:WP_000972203.1;Name=WP_000972203.1;Ontology_term=GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;gene=yadH;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747261.1;locus_tag=AC56_RS21295;product=ABC transporter permease;protein_id=WP_000972203.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	130359	130799	.	+	.	ID=gene-AC56_RS21290;Name=yadI;gbkey=Gene;gene=yadI;gene_biotype=protein_coding;locus_tag=AC56_RS21290;old_locus_tag=AC56_0115
NZ_JJLS01000101.1	Protein Homology	CDS	130359	130799	.	+	0	ID=cds-WP_001639042.1;Parent=gene-AC56_RS21290;Dbxref=GenBank:WP_001639042.1;Name=WP_001639042.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;gene=yadI;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414671.1;locus_tag=AC56_RS21290;product=PTS sugar transporter subunit IIA;protein_id=WP_001639042.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	130863	132092	.	+	.	ID=gene-AC56_RS21285;Name=yadE;gbkey=Gene;gene=yadE;gene_biotype=protein_coding;locus_tag=AC56_RS21285;old_locus_tag=AC56_0116
NZ_JJLS01000101.1	Protein Homology	CDS	130863	132092	.	+	0	ID=cds-WP_000277917.1;Parent=gene-AC56_RS21285;Dbxref=GenBank:WP_000277917.1;Name=WP_000277917.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;gene=yadE;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414672.1;locus_tag=AC56_RS21285;product=polysaccharide deacetylase family protein;protein_id=WP_000277917.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	132096	132476	.	-	.	ID=gene-AC56_RS21280;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=AC56_RS21280;old_locus_tag=AC56_0117
NZ_JJLS01000101.1	Protein Homology	CDS	132096	132476	.	-	0	ID=cds-WP_000621515.1;Parent=gene-AC56_RS21280;Dbxref=GenBank:WP_000621515.1;Name=WP_000621515.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124704.1;locus_tag=AC56_RS21280;product=aspartate 1-decarboxylase;protein_id=WP_000621515.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	132750	133652	.	+	.	ID=gene-AC56_RS21275;Name=rpnC;gbkey=Gene;gene=rpnC;gene_biotype=protein_coding;locus_tag=AC56_RS21275;old_locus_tag=AC56_0119
NZ_JJLS01000101.1	Protein Homology	CDS	132750	133652	.	+	0	ID=cds-WP_000339954.1;Parent=gene-AC56_RS21275;Dbxref=GenBank:WP_000339954.1;Name=WP_000339954.1;gbkey=CDS;gene=rpnC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414674.1;locus_tag=AC56_RS21275;product=recombination-promoting nuclease RpnC;protein_id=WP_000339954.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	133726	134577	.	-	.	ID=gene-AC56_RS21270;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=AC56_RS21270;old_locus_tag=AC56_0120
NZ_JJLS01000101.1	Protein Homology	CDS	133726	134577	.	-	0	ID=cds-WP_000905386.1;Parent=gene-AC56_RS21270;Dbxref=GenBank:WP_000905386.1;Name=WP_000905386.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414675.1;locus_tag=AC56_RS21270;product=pantoate--beta-alanine ligase;protein_id=WP_000905386.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	134589	135383	.	-	.	ID=gene-AC56_RS21265;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=AC56_RS21265;old_locus_tag=AC56_0121
NZ_JJLS01000101.1	Protein Homology	CDS	134589	135383	.	-	0	ID=cds-WP_000805497.1;Parent=gene-AC56_RS21265;Dbxref=GenBank:WP_000805497.1;Name=WP_000805497.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000805487.1;locus_tag=AC56_RS21265;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_000805497.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	135517	136629	.	-	.	ID=gene-AC56_RS21260;Name=AC56_RS21260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS21260;old_locus_tag=AC56_0122
NZ_JJLS01000101.1	Protein Homology	CDS	135517	136629	.	-	0	ID=cds-WP_001161724.1;Parent=gene-AC56_RS21260;Dbxref=GenBank:WP_001161724.1;Name=WP_001161724.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001489301.1;locus_tag=AC56_RS21260;product=fimbrial protein;protein_id=WP_001161724.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	136641	137231	.	-	.	ID=gene-AC56_RS21255;Name=AC56_RS21255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS21255;old_locus_tag=AC56_0123
NZ_JJLS01000101.1	Protein Homology	CDS	136641	137231	.	-	0	ID=cds-WP_000898741.1;Parent=gene-AC56_RS21255;Dbxref=GenBank:WP_000898741.1;Name=WP_000898741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001543438.1;locus_tag=AC56_RS21255;product=fimbrial-like protein;protein_id=WP_000898741.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	137252	137848	.	-	.	ID=gene-AC56_RS21250;Name=AC56_RS21250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS21250;old_locus_tag=AC56_0124
NZ_JJLS01000101.1	Protein Homology	CDS	137252	137848	.	-	0	ID=cds-WP_000767887.1;Parent=gene-AC56_RS21250;Dbxref=GenBank:WP_000767887.1;Name=WP_000767887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016241844.1;locus_tag=AC56_RS21250;product=fimbrial protein;protein_id=WP_000767887.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	gene	137863	138420	.	-	.	ID=gene-AC56_RS0125155;Name=AC56_RS0125155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0125155;old_locus_tag=AC56_0125
NZ_JJLS01000101.1	Protein Homology	CDS	137863	138420	.	-	0	ID=cds-WP_000821233.1;Parent=gene-AC56_RS0125155;Dbxref=GenBank:WP_000821233.1;Name=WP_000821233.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001624576.1;locus_tag=AC56_RS0125155;product=fimbrial protein;protein_id=WP_000821233.1;transl_table=11
NZ_JJLS01000101.1	RefSeq	pseudogene	138434	138652	.	-	.	ID=gene-AC56_RS21245;Name=AC56_RS21245;end_range=138652,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS21245;old_locus_tag=AC56_0126;partial=true;pseudo=true
NZ_JJLS01000101.1	Protein Homology	CDS	138434	138652	.	-	0	ID=cds-AC56_RS21245;Parent=gene-AC56_RS21245;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=138652,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308170.1;locus_tag=AC56_RS21245;partial=true;product=FimD/PapC C-terminal domain-containing protein;pseudo=true;transl_table=11
NZ_JJLS01000101.1	RefSeq	pseudogene	138708	139080	.	-	.	ID=gene-AC56_RS21240;Name=AC56_RS21240;end_range=139080,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS21240;old_locus_tag=AC56_0127;partial=true;pseudo=true
NZ_JJLS01000101.1	Protein Homology	CDS	138708	139080	.	-	1	ID=cds-AC56_RS21240;Parent=gene-AC56_RS21240;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=139080,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS21240;partial=true;product=IS5-like element IS903B family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000102.1 1 12079
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000102.1	RefSeq	region	1	12079	.	+	.	ID=NZ_JJLS01000102.1:1..12079;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000102.1	RefSeq	gene	1	485	.	-	.	ID=gene-AC56_RS21235;Name=AC56_RS21235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS21235;old_locus_tag=AC56_0128;partial=true;start_range=.,1
NZ_JJLS01000102.1	Protein Homology	CDS	1	485	.	-	0	ID=cds-WP_113706233.1;Parent=gene-AC56_RS21235;Dbxref=GenBank:WP_113706233.1;Name=WP_113706233.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS21235;partial=true;product=IS5 family transposase;protein_id=WP_113706233.1;start_range=.,1;transl_table=11
NZ_JJLS01000102.1	RefSeq	pseudogene	516	2910	.	-	.	ID=gene-AC56_RS21230;Name=AC56_RS21230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS21230;old_locus_tag=AC56_0129;partial=true;pseudo=true;start_range=.,516
NZ_JJLS01000102.1	Protein Homology	CDS	516	2910	.	-	0	ID=cds-AC56_RS21230;Parent=gene-AC56_RS21230;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308170.1;locus_tag=AC56_RS21230;partial=true;product=outer membrane usher protein;pseudo=true;start_range=.,516;transl_table=11
NZ_JJLS01000102.1	RefSeq	gene	2951	3676	.	-	.	ID=gene-AC56_RS21220;Name=AC56_RS21220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS21220;old_locus_tag=AC56_0131
NZ_JJLS01000102.1	Protein Homology	CDS	2951	3676	.	-	0	ID=cds-WP_032277833.1;Parent=gene-AC56_RS21220;Dbxref=GenBank:WP_032277833.1;Name=WP_032277833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000483959.1;locus_tag=AC56_RS21220;product=fimbrial chaperone;protein_id=WP_032277833.1;transl_table=11
NZ_JJLS01000102.1	RefSeq	gene	3759	4352	.	-	.	ID=gene-AC56_RS21215;Name=AC56_RS21215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS21215;old_locus_tag=AC56_0132
NZ_JJLS01000102.1	Protein Homology	CDS	3759	4352	.	-	0	ID=cds-WP_000751935.1;Parent=gene-AC56_RS21215;Dbxref=GenBank:WP_000751935.1;Name=WP_000751935.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741203.1;locus_tag=AC56_RS21215;product=fimbrial protein;protein_id=WP_000751935.1;transl_table=11
NZ_JJLS01000102.1	RefSeq	gene	4701	5180	.	-	.	ID=gene-AC56_RS21210;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=AC56_RS21210;old_locus_tag=AC56_0133
NZ_JJLS01000102.1	Protein Homology	CDS	4701	5180	.	-	0	ID=cds-WP_000215137.1;Parent=gene-AC56_RS21210;Dbxref=GenBank:WP_000215137.1;Name=WP_000215137.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000215162.1;locus_tag=AC56_RS21210;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_000215137.1;transl_table=11
NZ_JJLS01000102.1	RefSeq	gene	5177	6574	.	-	.	ID=gene-AC56_RS21205;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=AC56_RS21205;old_locus_tag=AC56_0134
NZ_JJLS01000102.1	Protein Homology	CDS	5177	6574	.	-	0	ID=cds-WP_012304915.1;Parent=gene-AC56_RS21205;Dbxref=GenBank:WP_012304915.1;Name=WP_012304915.1;Ontology_term=GO:0003723,GO:1990817;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,poly(A) RNA polymerase activity|1990817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414685.4;locus_tag=AC56_RS21205;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_012304915.1;transl_table=11
NZ_JJLS01000102.1	RefSeq	gene	6634	7530	.	-	.	ID=gene-AC56_RS21200;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=AC56_RS21200;old_locus_tag=AC56_0135
NZ_JJLS01000102.1	Protein Homology	CDS	6634	7530	.	-	0	ID=cds-WP_000132643.1;Parent=gene-AC56_RS21200;Dbxref=GenBank:WP_000132643.1;Name=WP_000132643.1;Ontology_term=GO:0006400,GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;gene=gluQRS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA modification|0006400||IEA,tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001432381.1;locus_tag=AC56_RS21200;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WP_000132643.1;transl_table=11
NZ_JJLS01000102.1	RefSeq	gene	7597	8052	.	-	.	ID=gene-AC56_RS21195;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=AC56_RS21195;old_locus_tag=AC56_0136
NZ_JJLS01000102.1	Protein Homology	CDS	7597	8052	.	-	0	ID=cds-WP_001155227.1;Parent=gene-AC56_RS21195;Dbxref=GenBank:WP_001155227.1;Name=WP_001155227.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209354.1;locus_tag=AC56_RS21195;product=RNA polymerase-binding protein DksA;protein_id=WP_001155227.1;transl_table=11
NZ_JJLS01000102.1	RefSeq	gene	8230	8934	.	-	.	ID=gene-AC56_RS21190;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=AC56_RS21190;old_locus_tag=AC56_0137
NZ_JJLS01000102.1	Protein Homology	CDS	8230	8934	.	-	0	ID=cds-WP_000396036.1;Parent=gene-AC56_RS21190;Dbxref=GenBank:WP_000396036.1;Name=WP_000396036.1;Ontology_term=GO:0003677;gbkey=CDS;gene=sfsA;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308177.1;locus_tag=AC56_RS21190;product=DNA/RNA nuclease SfsA;protein_id=WP_000396036.1;transl_table=11
NZ_JJLS01000102.1	RefSeq	gene	8949	9479	.	-	.	ID=gene-AC56_RS21185;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=AC56_RS21185;old_locus_tag=AC56_0138
NZ_JJLS01000102.1	Protein Homology	CDS	8949	9479	.	-	0	ID=cds-WP_032277834.1;Parent=gene-AC56_RS21185;Dbxref=GenBank:WP_032277834.1;Name=WP_032277834.1;Ontology_term=GO:0004113,GO:0008664;gbkey=CDS;gene=thpR;go_function=2'%2C3'-cyclic-nucleotide 3'-phosphodiesterase activity|0004113||IEA,RNA 2'%2C3'-cyclic 3'-phosphodiesterase activity|0008664||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414689.4;locus_tag=AC56_RS21185;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WP_032277834.1;transl_table=11
NZ_JJLS01000102.1	RefSeq	gene	9553	11982	.	+	.	ID=gene-AC56_RS21180;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=AC56_RS21180;old_locus_tag=AC56_0139
NZ_JJLS01000102.1	Protein Homology	CDS	9553	11982	.	+	0	ID=cds-WP_032277835.1;Parent=gene-AC56_RS21180;Dbxref=GenBank:WP_032277835.1;Name=WP_032277835.1;Ontology_term=GO:0004386,GO:0005524;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414690.4;locus_tag=AC56_RS21180;product=ATP-dependent helicase HrpB;protein_id=WP_032277835.1;transl_table=11
##sequence-region NZ_JJLS01000103.1 1 59257
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000103.1	RefSeq	region	1	59257	.	+	.	ID=NZ_JJLS01000103.1:1..59257;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000103.1	RefSeq	gene	180	2714	.	+	.	ID=gene-AC56_RS21175;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=AC56_RS21175;old_locus_tag=AC56_0140
NZ_JJLS01000103.1	Protein Homology	CDS	180	2714	.	+	0	ID=cds-WP_000918149.1;Parent=gene-AC56_RS21175;Dbxref=GenBank:WP_000918149.1;Name=WP_000918149.1;Ontology_term=GO:0009252,GO:0046677,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706097.2;locus_tag=AC56_RS21175;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_000918149.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	2934	5177	.	+	.	ID=gene-AC56_RS21170;Name=fhuA;gbkey=Gene;gene=fhuA;gene_biotype=protein_coding;locus_tag=AC56_RS21170;old_locus_tag=AC56_0142
NZ_JJLS01000103.1	Protein Homology	CDS	2934	5177	.	+	0	ID=cds-WP_000124421.1;Parent=gene-AC56_RS21170;Dbxref=GenBank:WP_000124421.1;Name=WP_000124421.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuA;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414692.1;locus_tag=AC56_RS21170;product=ferrichrome porin FhuA;protein_id=WP_000124421.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	5228	6025	.	+	.	ID=gene-AC56_RS21165;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;locus_tag=AC56_RS21165;old_locus_tag=AC56_0143
NZ_JJLS01000103.1	Protein Homology	CDS	5228	6025	.	+	0	ID=cds-WP_001158931.1;Parent=gene-AC56_RS21165;Dbxref=GenBank:WP_001158931.1;Name=WP_001158931.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fhuC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414693.1;locus_tag=AC56_RS21165;product=Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC;protein_id=WP_001158931.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	6025	6915	.	+	.	ID=gene-AC56_RS21160;Name=fhuD;gbkey=Gene;gene=fhuD;gene_biotype=protein_coding;locus_tag=AC56_RS21160;old_locus_tag=AC56_0144
NZ_JJLS01000103.1	Protein Homology	CDS	6025	6915	.	+	0	ID=cds-WP_000015990.1;Parent=gene-AC56_RS21160;Dbxref=GenBank:WP_000015990.1;Name=WP_000015990.1;gbkey=CDS;gene=fhuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414694.1;locus_tag=AC56_RS21160;product=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;protein_id=WP_000015990.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	6912	8894	.	+	.	ID=gene-AC56_RS21155;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=protein_coding;locus_tag=AC56_RS21155;old_locus_tag=AC56_0145
NZ_JJLS01000103.1	Protein Homology	CDS	6912	8894	.	+	0	ID=cds-WP_001408255.1;Parent=gene-AC56_RS21155;Dbxref=GenBank:WP_001408255.1;Name=WP_001408255.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fhuB;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308184.1;locus_tag=AC56_RS21155;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;protein_id=WP_001408255.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	9052	10332	.	-	.	ID=gene-AC56_RS21150;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=AC56_RS21150;old_locus_tag=AC56_0146
NZ_JJLS01000103.1	Protein Homology	CDS	9052	10332	.	-	0	ID=cds-WP_000045305.1;Parent=gene-AC56_RS21150;Dbxref=GenBank:WP_000045305.1;Name=WP_000045305.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233394.1;locus_tag=AC56_RS21150;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_000045305.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	10498	10545	.	+	.	ID=gene-AC56_RS33210;Name=yadX;gbkey=Gene;gene=yadX;gene_biotype=protein_coding;locus_tag=AC56_RS33210
NZ_JJLS01000103.1	Protein Homology	CDS	10498	10545	.	+	0	ID=cds-WP_211180485.1;Parent=gene-AC56_RS33210;Dbxref=GenBank:WP_211180485.1;Name=WP_211180485.1;gbkey=CDS;gene=yadX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051173.1;locus_tag=AC56_RS33210;product=protein YadX;protein_id=WP_211180485.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	10557	11978	.	+	.	ID=gene-AC56_RS21145;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=protein_coding;locus_tag=AC56_RS21145;old_locus_tag=AC56_0147
NZ_JJLS01000103.1	Protein Homology	CDS	10557	11978	.	+	0	ID=cds-WP_000845394.1;Parent=gene-AC56_RS21145;Dbxref=GenBank:WP_000845394.1;Name=WP_000845394.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0005886;gbkey=CDS;gene=clcA;go_component=plasma membrane|0005886||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414697.1;locus_tag=AC56_RS21145;product=H(+)/Cl(-) exchange transporter ClcA;protein_id=WP_000845394.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	12002	12067	.	+	.	ID=gene-AC56_RS32610;Name=yadW;gbkey=Gene;gene=yadW;gene_biotype=protein_coding;locus_tag=AC56_RS32610
NZ_JJLS01000103.1	Protein Homology	CDS	12002	12067	.	+	0	ID=cds-WP_120795373.1;Parent=gene-AC56_RS32610;Dbxref=GenBank:WP_120795373.1;Name=WP_120795373.1;gbkey=CDS;gene=yadW;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518738.1;locus_tag=AC56_RS32610;product=small protein YadW;protein_id=WP_120795373.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	12060	12404	.	+	.	ID=gene-AC56_RS21140;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=AC56_RS21140;old_locus_tag=AC56_0148
NZ_JJLS01000103.1	Protein Homology	CDS	12060	12404	.	+	0	ID=cds-WP_001295564.1;Parent=gene-AC56_RS21140;Dbxref=GenBank:WP_001295564.1;Name=WP_001295564.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295564.1;locus_tag=AC56_RS21140;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_001295564.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	12451	13074	.	-	.	ID=gene-AC56_RS21135;Name=yadS;gbkey=Gene;gene=yadS;gene_biotype=protein_coding;locus_tag=AC56_RS21135;old_locus_tag=AC56_0149
NZ_JJLS01000103.1	Protein Homology	CDS	12451	13074	.	-	0	ID=cds-WP_000964221.1;Parent=gene-AC56_RS21135;Dbxref=GenBank:WP_000964221.1;Name=WP_000964221.1;gbkey=CDS;gene=yadS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414699.1;locus_tag=AC56_RS21135;product=TRIC cation channel family protein;protein_id=WP_000964221.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	13112	13912	.	-	.	ID=gene-AC56_RS21130;Name=btuF;gbkey=Gene;gene=btuF;gene_biotype=protein_coding;locus_tag=AC56_RS21130;old_locus_tag=AC56_0150
NZ_JJLS01000103.1	Protein Homology	CDS	13112	13912	.	-	0	ID=cds-WP_001129927.1;Parent=gene-AC56_RS21130;Dbxref=GenBank:WP_001129927.1;Name=WP_001129927.1;Ontology_term=GO:0005524,GO:0031419;gbkey=CDS;gene=btuF;go_function=ATP binding|0005524||IEA,cobalamin binding|0031419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414700.1;locus_tag=AC56_RS21130;product=vitamin B12 ABC transporter substrate-binding protein BtuF;protein_id=WP_001129927.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	13905	14603	.	-	.	ID=gene-AC56_RS21125;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=AC56_RS21125;old_locus_tag=AC56_0151
NZ_JJLS01000103.1	Protein Homology	CDS	13905	14603	.	-	0	ID=cds-WP_000689844.1;Parent=gene-AC56_RS21125;Dbxref=GenBank:WP_000689844.1;Name=WP_000689844.1;Ontology_term=GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308190.1;locus_tag=AC56_RS21125;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_000689844.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	14687	16204	.	+	.	ID=gene-AC56_RS21120;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=AC56_RS21120;old_locus_tag=AC56_0152
NZ_JJLS01000103.1	Protein Homology	CDS	14687	16204	.	+	0	ID=cds-WP_032277837.1;Parent=gene-AC56_RS21120;Dbxref=GenBank:WP_032277837.1;Name=WP_032277837.1;Ontology_term=GO:0006203,GO:0000287,GO:0008832;gbkey=CDS;gene=dgt;go_function=magnesium ion binding|0000287||IEA,dGTPase activity|0008832||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414702.1;locus_tag=AC56_RS21120;product=dGTPase;protein_id=WP_032277837.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	16334	17758	.	+	.	ID=gene-AC56_RS21115;Name=degP;gbkey=Gene;gene=degP;gene_biotype=protein_coding;locus_tag=AC56_RS21115;old_locus_tag=AC56_0153
NZ_JJLS01000103.1	Protein Homology	CDS	16334	17758	.	+	0	ID=cds-WP_000753946.1;Parent=gene-AC56_RS21115;Dbxref=GenBank:WP_000753946.1;Name=WP_000753946.1;gbkey=CDS;gene=degP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308192.1;locus_tag=AC56_RS21115;product=serine endoprotease DegP;protein_id=WP_000753946.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	17913	19070	.	+	.	ID=gene-AC56_RS21110;Name=cdaR;gbkey=Gene;gene=cdaR;gene_biotype=protein_coding;locus_tag=AC56_RS21110;old_locus_tag=AC56_0154
NZ_JJLS01000103.1	Protein Homology	CDS	17913	19070	.	+	0	ID=cds-WP_000929439.1;Parent=gene-AC56_RS21110;Dbxref=GenBank:WP_000929439.1;Name=WP_000929439.1;gbkey=CDS;gene=cdaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308193.1;locus_tag=AC56_RS21110;product=DNA-binding transcriptional regulator CdaR;protein_id=WP_000929439.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	19159	19545	.	-	.	ID=gene-AC56_RS21105;Name=yaeH;gbkey=Gene;gene=yaeH;gene_biotype=protein_coding;locus_tag=AC56_RS21105;old_locus_tag=AC56_0155
NZ_JJLS01000103.1	Protein Homology	CDS	19159	19545	.	-	0	ID=cds-WP_000272188.1;Parent=gene-AC56_RS21105;Dbxref=GenBank:WP_000272188.1;Name=WP_000272188.1;gbkey=CDS;gene=yaeH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272186.1;locus_tag=AC56_RS21105;product=DUF3461 family protein;protein_id=WP_000272188.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	19707	20519	.	-	.	ID=gene-AC56_RS21100;Name=yaeI;gbkey=Gene;gene=yaeI;gene_biotype=protein_coding;locus_tag=AC56_RS21100;old_locus_tag=AC56_0156
NZ_JJLS01000103.1	Protein Homology	CDS	19707	20519	.	-	0	ID=cds-WP_000625625.1;Parent=gene-AC56_RS21100;Dbxref=GenBank:WP_000625625.1;Name=WP_000625625.1;gbkey=CDS;gene=yaeI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414706.2;locus_tag=AC56_RS21100;product=phosphodiesterase YaeI;protein_id=WP_000625625.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	20573	21397	.	-	.	ID=gene-AC56_RS21095;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=AC56_RS21095;old_locus_tag=AC56_0157
NZ_JJLS01000103.1	Protein Homology	CDS	20573	21397	.	-	0	ID=cds-WP_001186650.1;Parent=gene-AC56_RS21095;Dbxref=GenBank:WP_001186650.1;Name=WP_001186650.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132123.1;locus_tag=AC56_RS21095;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_001186650.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	21428	24100	.	-	.	ID=gene-AC56_RS21090;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=AC56_RS21090;old_locus_tag=AC56_0158
NZ_JJLS01000103.1	Protein Homology	CDS	21428	24100	.	-	0	ID=cds-WP_001094588.1;Parent=gene-AC56_RS21090;Dbxref=GenBank:WP_001094588.1;Name=WP_001094588.1;Ontology_term=GO:0008152,GO:0016779;gbkey=CDS;gene=glnD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414709.1;locus_tag=AC56_RS21090;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=WP_001094588.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	24162	24956	.	-	.	ID=gene-AC56_RS21085;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=AC56_RS21085;old_locus_tag=AC56_0159
NZ_JJLS01000103.1	Protein Homology	CDS	24162	24956	.	-	0	ID=cds-WP_001018194.1;Parent=gene-AC56_RS21085;Dbxref=GenBank:WP_001018194.1;Name=WP_001018194.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308197.1;locus_tag=AC56_RS21085;product=type I methionyl aminopeptidase;protein_id=WP_001018194.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	25324	26049	.	+	.	ID=gene-AC56_RS21080;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=AC56_RS21080;old_locus_tag=AC56_0160
NZ_JJLS01000103.1	Protein Homology	CDS	25324	26049	.	+	0	ID=cds-WP_000246882.1;Parent=gene-AC56_RS21080;Dbxref=GenBank:WP_000246882.1;Name=WP_000246882.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=AC56_RS21080;product=30S ribosomal protein S2;protein_id=WP_000246882.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	26307	27158	.	+	.	ID=gene-AC56_RS21075;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=AC56_RS21075;old_locus_tag=AC56_0162
NZ_JJLS01000103.1	Protein Homology	CDS	26307	27158	.	+	0	ID=cds-WP_000818114.1;Parent=gene-AC56_RS21075;Dbxref=GenBank:WP_000818114.1;Name=WP_000818114.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132116.1;locus_tag=AC56_RS21075;product=translation elongation factor Ts;protein_id=WP_000818114.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	27305	28030	.	+	.	ID=gene-AC56_RS21070;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=AC56_RS21070;old_locus_tag=AC56_0163
NZ_JJLS01000103.1	Protein Homology	CDS	27305	28030	.	+	0	ID=cds-WP_000224573.1;Parent=gene-AC56_RS21070;Dbxref=GenBank:WP_000224573.1;Name=WP_000224573.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000224576.1;locus_tag=AC56_RS21070;product=UMP kinase;protein_id=WP_000224573.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	28322	28879	.	+	.	ID=gene-AC56_RS21065;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=AC56_RS21065;old_locus_tag=AC56_0164
NZ_JJLS01000103.1	Protein Homology	CDS	28322	28879	.	+	0	ID=cds-WP_000622418.1;Parent=gene-AC56_RS21065;Dbxref=GenBank:WP_000622418.1;Name=WP_000622418.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622421.1;locus_tag=AC56_RS21065;product=ribosome recycling factor;protein_id=WP_000622418.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	28971	30167	.	+	.	ID=gene-AC56_RS21060;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=AC56_RS21060;old_locus_tag=AC56_0165
NZ_JJLS01000103.1	Protein Homology	CDS	28971	30167	.	+	0	ID=cds-WP_000811923.1;Parent=gene-AC56_RS21060;Dbxref=GenBank:WP_000811923.1;Name=WP_000811923.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;gene=ispC;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414715.1;locus_tag=AC56_RS21060;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_000811923.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	30356	31114	.	+	.	ID=gene-AC56_RS21055;Name=ispU;gbkey=Gene;gene=ispU;gene_biotype=protein_coding;gene_synonym=uppS;locus_tag=AC56_RS21055;old_locus_tag=AC56_0166
NZ_JJLS01000103.1	Protein Homology	CDS	30356	31114	.	+	0	ID=cds-WP_001295562.1;Parent=gene-AC56_RS21055;Dbxref=GenBank:WP_001295562.1;Name=WP_001295562.1;Ontology_term=GO:0043164,GO:0004659,GO:0008834;gbkey=CDS;gene=ispU;go_function=prenyltransferase activity|0004659||IEA,ditrans%2Cpolycis-undecaprenyl-diphosphate synthase [(2E%2C6E)-farnesyl-diphosphate specific] activity|0008834||IEA;go_process=Gram-negative-bacterium-type cell wall biogenesis|0043164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308203.2;locus_tag=AC56_RS21055;product=(2E%2C6E)-farnesyl-diphosphate-specific ditrans%2Cpolycis-undecaprenyl-diphosphate synthase;protein_id=WP_001295562.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	31127	31984	.	+	.	ID=gene-AC56_RS21050;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=AC56_RS21050;old_locus_tag=AC56_0167
NZ_JJLS01000103.1	Protein Homology	CDS	31127	31984	.	+	0	ID=cds-WP_032277838.1;Parent=gene-AC56_RS21050;Dbxref=GenBank:WP_032277838.1;Name=WP_032277838.1;Ontology_term=GO:0016772;gbkey=CDS;gene=cdsA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414717.2;locus_tag=AC56_RS21050;product=phosphatidate cytidylyltransferase;protein_id=WP_032277838.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	31996	33348	.	+	.	ID=gene-AC56_RS21045;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=AC56_RS21045;old_locus_tag=AC56_0168
NZ_JJLS01000103.1	Protein Homology	CDS	31996	33348	.	+	0	ID=cds-WP_001543451.1;Parent=gene-AC56_RS21045;Dbxref=GenBank:WP_001543451.1;Name=WP_001543451.1;Ontology_term=GO:0006508,GO:0004222,GO:0005515,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308205.1;locus_tag=AC56_RS21045;product=sigma E protease regulator RseP;protein_id=WP_001543451.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	33378	35810	.	+	.	ID=gene-AC56_RS21040;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=AC56_RS21040;old_locus_tag=AC56_0169
NZ_JJLS01000103.1	Protein Homology	CDS	33378	35810	.	+	0	ID=cds-WP_001240896.1;Parent=gene-AC56_RS21040;Dbxref=GenBank:WP_001240896.1;Name=WP_001240896.1;Ontology_term=GO:0071709,GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;go_process=membrane assembly|0071709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308206.1;locus_tag=AC56_RS21040;product=outer membrane protein assembly factor BamA;protein_id=WP_001240896.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	35932	36417	.	+	.	ID=gene-AC56_RS21035;Name=skp;gbkey=Gene;gene=skp;gene_biotype=protein_coding;gene_synonym=hlpA,ompH;locus_tag=AC56_RS21035;old_locus_tag=AC56_0170
NZ_JJLS01000103.1	Protein Homology	CDS	35932	36417	.	+	0	ID=cds-WP_000758956.1;Parent=gene-AC56_RS21035;Dbxref=GenBank:WP_000758956.1;Name=WP_000758956.1;gbkey=CDS;gene=skp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308207.1;locus_tag=AC56_RS21035;product=molecular chaperone Skp;protein_id=WP_000758956.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	36421	37446	.	+	.	ID=gene-AC56_RS21030;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=AC56_RS21030;old_locus_tag=AC56_0171
NZ_JJLS01000103.1	Protein Homology	CDS	36421	37446	.	+	0	ID=cds-WP_001139279.1;Parent=gene-AC56_RS21030;Dbxref=GenBank:WP_001139279.1;Name=WP_001139279.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132101.1;locus_tag=AC56_RS21030;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_001139279.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	37551	38006	.	+	.	ID=gene-AC56_RS21025;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=AC56_RS21025;old_locus_tag=AC56_0172
NZ_JJLS01000103.1	Protein Homology	CDS	37551	38006	.	+	0	ID=cds-WP_000210739.1;Parent=gene-AC56_RS21025;Dbxref=GenBank:WP_000210739.1;Name=WP_000210739.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210741.1;locus_tag=AC56_RS21025;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_000210739.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	38010	38798	.	+	.	ID=gene-AC56_RS21020;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=AC56_RS21020;old_locus_tag=AC56_0173
NZ_JJLS01000103.1	Protein Homology	CDS	38010	38798	.	+	0	ID=cds-WP_032277839.1;Parent=gene-AC56_RS21020;Dbxref=GenBank:WP_032277839.1;Name=WP_032277839.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132096.1;locus_tag=AC56_RS21020;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_032277839.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	38798	39946	.	+	.	ID=gene-AC56_RS21015;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=AC56_RS21015;old_locus_tag=AC56_0174
NZ_JJLS01000103.1	Protein Homology	CDS	38798	39946	.	+	0	ID=cds-WP_000139654.1;Parent=gene-AC56_RS21015;Dbxref=GenBank:WP_000139654.1;Name=WP_000139654.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414724.1;locus_tag=AC56_RS21015;product=lipid-A-disaccharide synthase;protein_id=WP_000139654.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	39943	40539	.	+	.	ID=gene-AC56_RS21010;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=AC56_RS21010;old_locus_tag=AC56_0175
NZ_JJLS01000103.1	Protein Homology	CDS	39943	40539	.	+	0	ID=cds-WP_032277840.1;Parent=gene-AC56_RS21010;Dbxref=GenBank:WP_032277840.1;Name=WP_032277840.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414725.1;locus_tag=AC56_RS21010;product=ribonuclease HII;protein_id=WP_032277840.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	40576	44058	.	+	.	ID=gene-AC56_RS21005;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=AC56_RS21005;old_locus_tag=AC56_0176
NZ_JJLS01000103.1	Protein Homology	CDS	40576	44058	.	+	0	ID=cds-WP_001294757.1;Parent=gene-AC56_RS21005;Dbxref=GenBank:WP_001294757.1;Name=WP_001294757.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414726.1;locus_tag=AC56_RS21005;product=DNA polymerase III subunit alpha;protein_id=WP_001294757.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	44071	45030	.	+	.	ID=gene-AC56_RS21000;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=AC56_RS21000;old_locus_tag=AC56_0177
NZ_JJLS01000103.1	Protein Homology	CDS	44071	45030	.	+	0	ID=cds-WP_000055746.1;Parent=gene-AC56_RS21000;Dbxref=GenBank:WP_000055746.1;Name=WP_000055746.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132091.1;locus_tag=AC56_RS21000;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WP_000055746.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	45129	47270	.	+	.	ID=gene-AC56_RS20995;Name=ldcC;gbkey=Gene;gene=ldcC;gene_biotype=protein_coding;locus_tag=AC56_RS20995;old_locus_tag=AC56_0178
NZ_JJLS01000103.1	Protein Homology	CDS	45129	47270	.	+	0	ID=cds-WP_001020973.1;Parent=gene-AC56_RS20995;Dbxref=GenBank:WP_001020973.1;Name=WP_001020973.1;gbkey=CDS;gene=ldcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414728.1;locus_tag=AC56_RS20995;product=lysine decarboxylase LdcC;protein_id=WP_001020973.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	47327	47716	.	+	.	ID=gene-AC56_RS20990;Name=yaeR;gbkey=Gene;gene=yaeR;gene_biotype=protein_coding;locus_tag=AC56_RS20990;old_locus_tag=AC56_0179
NZ_JJLS01000103.1	Protein Homology	CDS	47327	47716	.	+	0	ID=cds-WP_000901098.1;Parent=gene-AC56_RS20990;Dbxref=GenBank:WP_000901098.1;Name=WP_000901098.1;gbkey=CDS;gene=yaeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308216.2;locus_tag=AC56_RS20990;product=VOC family protein;protein_id=WP_000901098.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	47781	49079	.	+	.	ID=gene-AC56_RS20985;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=AC56_RS20985;old_locus_tag=AC56_0180
NZ_JJLS01000103.1	Protein Homology	CDS	47781	49079	.	+	0	ID=cds-WP_000176567.1;Parent=gene-AC56_RS20985;Dbxref=GenBank:WP_000176567.1;Name=WP_000176567.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706133.1;locus_tag=AC56_RS20985;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_000176567.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	49128	49388	.	-	.	ID=gene-AC56_RS20980;Name=rof;gbkey=Gene;gene=rof;gene_biotype=protein_coding;locus_tag=AC56_RS20980;old_locus_tag=AC56_0181
NZ_JJLS01000103.1	Protein Homology	CDS	49128	49388	.	-	0	ID=cds-WP_000062312.1;Parent=gene-AC56_RS20980;Dbxref=GenBank:WP_000062312.1;Name=WP_000062312.1;gbkey=CDS;gene=rof;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706134.1;locus_tag=AC56_RS20980;product=Rho-binding antiterminator;protein_id=WP_000062312.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	49375	49575	.	-	.	ID=gene-AC56_RS20975;Name=yaeP;gbkey=Gene;gene=yaeP;gene_biotype=protein_coding;locus_tag=AC56_RS20975;old_locus_tag=AC56_0182
NZ_JJLS01000103.1	Protein Homology	CDS	49375	49575	.	-	0	ID=cds-WP_000417058.1;Parent=gene-AC56_RS20975;Dbxref=GenBank:WP_000417058.1;Name=WP_000417058.1;gbkey=CDS;gene=yaeP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133967.1;locus_tag=AC56_RS20975;product=YaeP family protein;protein_id=WP_000417058.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	49741	50286	.	+	.	ID=gene-AC56_RS20970;Name=yaeQ;gbkey=Gene;gene=yaeQ;gene_biotype=protein_coding;locus_tag=AC56_RS20970;old_locus_tag=AC56_0183
NZ_JJLS01000103.1	Protein Homology	CDS	49741	50286	.	+	0	ID=cds-WP_001185290.1;Parent=gene-AC56_RS20970;Dbxref=GenBank:WP_001185290.1;Name=WP_001185290.1;gbkey=CDS;gene=yaeQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414732.1;locus_tag=AC56_RS20970;product=YaeQ family protein;protein_id=WP_001185290.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	50283	50705	.	+	.	ID=gene-AC56_RS20965;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=AC56_RS20965;old_locus_tag=AC56_0184
NZ_JJLS01000103.1	Protein Homology	CDS	50283	50705	.	+	0	ID=cds-WP_000635545.1;Parent=gene-AC56_RS20965;Dbxref=GenBank:WP_000635545.1;Name=WP_000635545.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308220.1;locus_tag=AC56_RS20965;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=WP_000635545.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	50719	51429	.	+	.	ID=gene-AC56_RS20960;Name=nlpE;gbkey=Gene;gene=nlpE;gene_biotype=protein_coding;gene_synonym=cutF;locus_tag=AC56_RS20960;old_locus_tag=AC56_0185
NZ_JJLS01000103.1	Protein Homology	CDS	50719	51429	.	+	0	ID=cds-WP_000239173.1;Parent=gene-AC56_RS20960;Dbxref=GenBank:WP_000239173.1;Name=WP_000239173.1;Note=NlpE%2C an outer membrane lipoprotein%2C interacts directly with CpxA%2C the sensor histidine kinase of the Cpx system for response to envelope stress.;gbkey=CDS;gene=nlpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706138.1;locus_tag=AC56_RS20960;product=envelope stress response activation lipoprotein NlpE;protein_id=WP_000239173.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	51603	52427	.	-	.	ID=gene-AC56_RS20955;Name=yaeF;gbkey=Gene;gene=yaeF;gene_biotype=protein_coding;locus_tag=AC56_RS20955;old_locus_tag=AC56_0186
NZ_JJLS01000103.1	Protein Homology	CDS	51603	52427	.	-	0	ID=cds-WP_001336393.1;Parent=gene-AC56_RS20955;Dbxref=GenBank:WP_001336393.1;Name=WP_001336393.1;gbkey=CDS;gene=yaeF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414735.4;locus_tag=AC56_RS20955;product=YaeF family permuted papain-like enzyme;protein_id=WP_001336393.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	52481	54199	.	-	.	ID=gene-AC56_RS20950;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=AC56_RS20950;old_locus_tag=AC56_0187
NZ_JJLS01000103.1	Protein Homology	CDS	52481	54199	.	-	0	ID=cds-WP_001260712.1;Parent=gene-AC56_RS20950;Dbxref=GenBank:WP_001260712.1;Name=WP_001260712.1;Ontology_term=GO:0006433,GO:0004827,GO:0005524,GO:0005737;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||IEA;go_function=proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133963.1;locus_tag=AC56_RS20950;product=proline--tRNA ligase;protein_id=WP_001260712.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	54310	55017	.	-	.	ID=gene-AC56_RS20945;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=AC56_RS20945;old_locus_tag=AC56_0188
NZ_JJLS01000103.1	Protein Homology	CDS	54310	55017	.	-	0	ID=cds-WP_000094027.1;Parent=gene-AC56_RS20945;Dbxref=GenBank:WP_000094027.1;Name=WP_000094027.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414737.1;locus_tag=AC56_RS20945;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WP_000094027.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	55014	55418	.	-	.	ID=gene-AC56_RS20940;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=AC56_RS20940;old_locus_tag=AC56_0189
NZ_JJLS01000103.1	Protein Homology	CDS	55014	55418	.	-	0	ID=cds-WP_001202329.1;Parent=gene-AC56_RS20940;Dbxref=GenBank:WP_001202329.1;Name=WP_001202329.1;gbkey=CDS;gene=rcsF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414738.1;locus_tag=AC56_RS20940;product=Rcs stress response system protein RcsF;protein_id=WP_001202329.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	55536	56351	.	-	.	ID=gene-AC56_RS20935;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=AC56_RS20935;old_locus_tag=AC56_0190
NZ_JJLS01000103.1	Protein Homology	CDS	55536	56351	.	-	0	ID=cds-WP_000874226.1;Parent=gene-AC56_RS20935;Dbxref=GenBank:WP_000874226.1;Name=WP_000874226.1;gbkey=CDS;gene=metQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414739.1;locus_tag=AC56_RS20935;product=methionine ABC transporter substrate-binding lipoprotein MetQ;protein_id=WP_000874226.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	56391	57044	.	-	.	ID=gene-AC56_RS20930;Name=metI;gbkey=Gene;gene=metI;gene_biotype=protein_coding;locus_tag=AC56_RS20930;old_locus_tag=AC56_0191
NZ_JJLS01000103.1	Protein Homology	CDS	56391	57044	.	-	0	ID=cds-WP_001294600.1;Parent=gene-AC56_RS20930;Dbxref=GenBank:WP_001294600.1;Name=WP_001294600.1;gbkey=CDS;gene=metI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=AC56_RS20930;product=methionine ABC transporter permease MetI;protein_id=WP_001294600.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	57037	58068	.	-	.	ID=gene-AC56_RS20925;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=AC56_RS20925;old_locus_tag=AC56_0192
NZ_JJLS01000103.1	Protein Homology	CDS	57037	58068	.	-	0	ID=cds-WP_000593994.1;Parent=gene-AC56_RS20925;Dbxref=GenBank:WP_000593994.1;Name=WP_000593994.1;Ontology_term=GO:0048473,GO:0005524,GO:0033232,GO:0009276;gbkey=CDS;gene=metN;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-methionine transporter activity|0033232||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168731.1;locus_tag=AC56_RS20925;product=methionine ABC transporter ATP-binding protein MetN;protein_id=WP_000593994.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	58256	58828	.	+	.	ID=gene-AC56_RS20920;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=AC56_RS20920;old_locus_tag=AC56_0193
NZ_JJLS01000103.1	Protein Homology	CDS	58256	58828	.	+	0	ID=cds-WP_001140174.1;Parent=gene-AC56_RS20920;Dbxref=GenBank:WP_001140174.1;Name=WP_001140174.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001608862.1;locus_tag=AC56_RS20920;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_001140174.1;transl_table=11
NZ_JJLS01000103.1	RefSeq	gene	59192	59257	.	+	.	ID=gene-AC56_RS0125165;Name=AC56_RS0125165;end_range=59257,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC56_RS0125165;partial=true
NZ_JJLS01000103.1	cmsearch	rRNA	59192	59257	.	+	.	ID=rna-AC56_RS0125165;Parent=gene-AC56_RS0125165;Dbxref=RFAM:RF00177;end_range=59257,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS0125165;partial=true;product=16S ribosomal RNA
NZ_JJLS01000103.1	cmsearch	exon	59192	59257	.	+	.	ID=exon-AC56_RS0125165-1;Parent=rna-AC56_RS0125165;Dbxref=RFAM:RF00177;end_range=59257,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS0125165;partial=true;product=16S ribosomal RNA
##sequence-region NZ_JJLS01000104.1 1 1021
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000104.1	RefSeq	region	1	1021	.	+	.	ID=NZ_JJLS01000104.1:1..1021;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000104.1	RefSeq	gene	1	321	.	+	.	ID=gene-AC56_RS0125170;Name=AC56_RS0125170;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC56_RS0125170;partial=true;start_range=.,1
NZ_JJLS01000104.1	cmsearch	rRNA	1	321	.	+	.	ID=rna-AC56_RS0125170;Parent=gene-AC56_RS0125170;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS0125170;partial=true;product=16S ribosomal RNA;start_range=.,1
NZ_JJLS01000104.1	cmsearch	exon	1	321	.	+	.	ID=exon-AC56_RS0125170-1;Parent=rna-AC56_RS0125170;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS0125170;partial=true;product=16S ribosomal RNA;start_range=.,1
NZ_JJLS01000104.1	RefSeq	gene	493	568	.	+	.	ID=gene-AC56_RS20915;Name=AC56_RS20915;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS20915;old_locus_tag=AC56_0194
NZ_JJLS01000104.1	tRNAscan-SE	tRNA	493	568	.	+	.	ID=rna-AC56_RS20915;Parent=gene-AC56_RS20915;anticodon=(pos:527..529);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS20915;product=tRNA-Glu
NZ_JJLS01000104.1	tRNAscan-SE	exon	493	568	.	+	.	ID=exon-AC56_RS20915-1;Parent=rna-AC56_RS20915;anticodon=(pos:527..529);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS20915;product=tRNA-Glu
NZ_JJLS01000104.1	RefSeq	gene	762	1021	.	+	.	ID=gene-AC56_RS20910;Name=AC56_RS20910;end_range=1021,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC56_RS20910;old_locus_tag=AC56_0195;partial=true
NZ_JJLS01000104.1	cmsearch	rRNA	762	1021	.	+	.	ID=rna-AC56_RS20910;Parent=gene-AC56_RS20910;Dbxref=RFAM:RF02541;end_range=1021,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS20910;partial=true;product=23S ribosomal RNA
NZ_JJLS01000104.1	cmsearch	exon	762	1021	.	+	.	ID=exon-AC56_RS20910-1;Parent=rna-AC56_RS20910;Dbxref=RFAM:RF02541;end_range=1021,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS20910;partial=true;product=23S ribosomal RNA
##sequence-region NZ_JJLS01000105.1 1 11873
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000105.1	RefSeq	region	1	11873	.	+	.	ID=NZ_JJLS01000105.1:1..11873;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000105.1	RefSeq	gene	1	2893	.	+	.	ID=gene-AC56_RS0125175;Name=AC56_RS0125175;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC56_RS0125175;partial=true;start_range=.,1
NZ_JJLS01000105.1	cmsearch	rRNA	1	2893	.	+	.	ID=rna-AC56_RS0125175;Parent=gene-AC56_RS0125175;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS0125175;partial=true;product=23S ribosomal RNA;start_range=.,1
NZ_JJLS01000105.1	cmsearch	exon	1	2893	.	+	.	ID=exon-AC56_RS0125175-1;Parent=rna-AC56_RS0125175;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS0125175;partial=true;product=23S ribosomal RNA;start_range=.,1
NZ_JJLS01000105.1	RefSeq	gene	2988	3103	.	+	.	ID=gene-AC56_RS20905;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AC56_RS20905;old_locus_tag=AC56_0198
NZ_JJLS01000105.1	cmsearch	rRNA	2988	3103	.	+	.	ID=rna-AC56_RS20905;Parent=gene-AC56_RS20905;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS20905;product=5S ribosomal RNA
NZ_JJLS01000105.1	cmsearch	exon	2988	3103	.	+	.	ID=exon-AC56_RS20905-1;Parent=rna-AC56_RS20905;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS20905;product=5S ribosomal RNA
NZ_JJLS01000105.1	RefSeq	gene	3158	3234	.	+	.	ID=gene-AC56_RS20900;Name=AC56_RS20900;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS20900;old_locus_tag=AC56_0199
NZ_JJLS01000105.1	tRNAscan-SE	tRNA	3158	3234	.	+	.	ID=rna-AC56_RS20900;Parent=gene-AC56_RS20900;anticodon=(pos:3192..3194);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS20900;product=tRNA-Asp
NZ_JJLS01000105.1	tRNAscan-SE	exon	3158	3234	.	+	.	ID=exon-AC56_RS20900-1;Parent=rna-AC56_RS20900;anticodon=(pos:3192..3194);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS20900;product=tRNA-Asp
NZ_JJLS01000105.1	RefSeq	gene	3397	4200	.	+	.	ID=gene-AC56_RS20895;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=AC56_RS20895;old_locus_tag=AC56_0200
NZ_JJLS01000105.1	Protein Homology	CDS	3397	4200	.	+	0	ID=cds-WP_000997010.1;Parent=gene-AC56_RS20895;Dbxref=GenBank:WP_000997010.1;Name=WP_000997010.1;Ontology_term=GO:0047834;gbkey=CDS;gene=dkgB;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414743.1;locus_tag=AC56_RS20895;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=WP_000997010.1;transl_table=11
NZ_JJLS01000105.1	RefSeq	gene	4197	5111	.	-	.	ID=gene-AC56_RS20890;Name=yafC;gbkey=Gene;gene=yafC;gene_biotype=protein_coding;locus_tag=AC56_RS20890;old_locus_tag=AC56_0201
NZ_JJLS01000105.1	Protein Homology	CDS	4197	5111	.	-	0	ID=cds-WP_000648572.1;Parent=gene-AC56_RS20890;Dbxref=GenBank:WP_000648572.1;Name=WP_000648572.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yafC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414744.1;locus_tag=AC56_RS20890;product=DNA-binding transcriptional regulator YafC;protein_id=WP_000648572.1;transl_table=11
NZ_JJLS01000105.1	RefSeq	gene	5352	6152	.	+	.	ID=gene-AC56_RS20885;Name=AC56_RS20885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20885;old_locus_tag=AC56_0202
NZ_JJLS01000105.1	Protein Homology	CDS	5352	6152	.	+	0	ID=cds-WP_032277841.1;Parent=gene-AC56_RS20885;Dbxref=GenBank:WP_032277841.1;Name=WP_032277841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414745.1;locus_tag=AC56_RS20885;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_032277841.1;transl_table=11
NZ_JJLS01000105.1	RefSeq	gene	6156	6779	.	+	.	ID=gene-AC56_RS20880;Name=AC56_RS20880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20880;old_locus_tag=AC56_0203
NZ_JJLS01000105.1	Protein Homology	CDS	6156	6779	.	+	0	ID=cds-WP_000016007.1;Parent=gene-AC56_RS20880;Dbxref=GenBank:WP_000016007.1;Name=WP_000016007.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: protein motif:HMM:NF024880.6;locus_tag=AC56_RS20880;product=class I SAM-dependent methyltransferase;protein_id=WP_000016007.1;transl_table=11
NZ_JJLS01000105.1	RefSeq	gene	6827	8185	.	-	.	ID=gene-AC56_RS20875;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;locus_tag=AC56_RS20875;old_locus_tag=AC56_0204
NZ_JJLS01000105.1	Protein Homology	CDS	6827	8185	.	-	0	ID=cds-WP_032277842.1;Parent=gene-AC56_RS20875;Dbxref=GenBank:WP_032277842.1;Name=WP_032277842.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltD;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414747.1;locus_tag=AC56_RS20875;product=murein transglycosylase D;protein_id=WP_032277842.1;transl_table=11
NZ_JJLS01000105.1	RefSeq	gene	8257	9012	.	-	.	ID=gene-AC56_RS20870;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=AC56_RS20870;old_locus_tag=AC56_0205
NZ_JJLS01000105.1	Protein Homology	CDS	8257	9012	.	-	0	ID=cds-WP_032277844.1;Parent=gene-AC56_RS20870;Dbxref=GenBank:WP_032277844.1;Name=WP_032277844.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308235.1;locus_tag=AC56_RS20870;product=hydroxyacylglutathione hydrolase;protein_id=WP_032277844.1;transl_table=11
NZ_JJLS01000105.1	RefSeq	gene	9046	9768	.	+	.	ID=gene-AC56_RS20865;Name=AC56_RS20865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20865;old_locus_tag=AC56_0206
NZ_JJLS01000105.1	Protein Homology	CDS	9046	9768	.	+	0	ID=cds-WP_001326702.1;Parent=gene-AC56_RS20865;Dbxref=GenBank:WP_001326702.1;Name=WP_001326702.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414749.2;locus_tag=AC56_RS20865;product=class I SAM-dependent methyltransferase;protein_id=WP_001326702.1;transl_table=11
NZ_JJLS01000105.1	RefSeq	gene	9765	10232	.	-	.	ID=gene-AC56_RS20860;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=AC56_RS20860;old_locus_tag=AC56_0207
NZ_JJLS01000105.1	Protein Homology	CDS	9765	10232	.	-	0	ID=cds-WP_000917883.1;Parent=gene-AC56_RS20860;Dbxref=GenBank:WP_000917883.1;Name=WP_000917883.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308237.1;locus_tag=AC56_RS20860;product=ribonuclease HI;protein_id=WP_000917883.1;transl_table=11
NZ_JJLS01000105.1	RefSeq	gene	10297	11028	.	+	.	ID=gene-AC56_RS20855;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=AC56_RS20855;old_locus_tag=AC56_0208
NZ_JJLS01000105.1	Protein Homology	CDS	10297	11028	.	+	0	ID=cds-WP_001340895.1;Parent=gene-AC56_RS20855;Dbxref=GenBank:WP_001340895.1;Name=WP_001340895.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414751.1;locus_tag=AC56_RS20855;product=DNA polymerase III subunit epsilon;protein_id=WP_001340895.1;transl_table=11
NZ_JJLS01000105.1	RefSeq	gene	11161	11237	.	+	.	ID=gene-AC56_RS20850;Name=AC56_RS20850;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS20850;old_locus_tag=AC56_0209
NZ_JJLS01000105.1	tRNAscan-SE	tRNA	11161	11237	.	+	.	ID=rna-AC56_RS20850;Parent=gene-AC56_RS20850;anticodon=(pos:11195..11197);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS20850;product=tRNA-Asp
NZ_JJLS01000105.1	tRNAscan-SE	exon	11161	11237	.	+	.	ID=exon-AC56_RS20850-1;Parent=rna-AC56_RS20850;anticodon=(pos:11195..11197);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS20850;product=tRNA-Asp
NZ_JJLS01000105.1	RefSeq	gene	11425	11873	.	-	.	ID=gene-AC56_RS20845;Name=AC56_RS20845;end_range=11873,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20845;old_locus_tag=AC56_0210;partial=true
NZ_JJLS01000105.1	Protein Homology	CDS	11425	11873	.	-	2	ID=cds-WP_032202260.1;Parent=gene-AC56_RS20845;Dbxref=GenBank:WP_032202260.1;Name=WP_032202260.1;Ontology_term=GO:0004803;end_range=11873,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS20845;partial=true;product=IS1 family transposase;protein_id=WP_032202260.1;transl_table=11
##sequence-region NZ_JJLS01000106.1 1 4527
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000106.1	RefSeq	region	1	4527	.	+	.	ID=NZ_JJLS01000106.1:1..4527;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000106.1	RefSeq	pseudogene	1	420	.	-	.	ID=gene-AC56_RS28645;Name=AC56_RS28645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS28645;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000106.1	Protein Homology	CDS	1	420	.	-	0	ID=cds-AC56_RS28645;Parent=gene-AC56_RS28645;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS28645;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000106.1	RefSeq	gene	968	3076	.	+	.	ID=gene-AC56_RS20835;Name=AC56_RS20835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20835;old_locus_tag=AC56_0214
NZ_JJLS01000106.1	Protein Homology	CDS	968	3076	.	+	0	ID=cds-WP_032277847.1;Parent=gene-AC56_RS20835;Dbxref=GenBank:WP_032277847.1;Name=WP_032277847.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310087.1;locus_tag=AC56_RS20835;product=type VI secretion system tip protein VgrG;protein_id=WP_032277847.1;transl_table=11
NZ_JJLS01000106.1	RefSeq	pseudogene	3143	4527	.	+	.	ID=gene-AC56_RS20830;Name=rhsD;end_range=4527,.;gbkey=Gene;gene=rhsD;gene_biotype=pseudogene;locus_tag=AC56_RS20830;old_locus_tag=AC56_0215;partial=true;pseudo=true
NZ_JJLS01000106.1	Protein Homology	CDS	3143	4527	.	+	0	ID=cds-AC56_RS20830;Parent=gene-AC56_RS20830;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=4527,.;gbkey=CDS;gene=rhsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415030.1;locus_tag=AC56_RS20830;partial=true;product=rhs element protein RhsD;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000107.1 1 1158
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000107.1	RefSeq	region	1	1158	.	+	.	ID=NZ_JJLS01000107.1:1..1158;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000107.1	RefSeq	gene	1	436	.	+	.	ID=gene-AC56_RS20825;Name=AC56_RS20825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20825;old_locus_tag=AC56_0216;partial=true;start_range=.,1
NZ_JJLS01000107.1	Protein Homology	CDS	1	436	.	+	1	ID=cds-WP_032282542.1;Parent=gene-AC56_RS20825;Dbxref=GenBank:WP_032282542.1;Name=WP_032282542.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AC56_RS20825;partial=true;product=ISAs1 family transposase;protein_id=WP_032282542.1;start_range=.,1;transl_table=11
NZ_JJLS01000107.1	RefSeq	pseudogene	414	689	.	+	.	ID=gene-AC56_RS20820;Name=AC56_RS20820;end_range=689,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS20820;old_locus_tag=AC56_0217;partial=true;pseudo=true
NZ_JJLS01000107.1	Protein Homology	CDS	414	689	.	+	0	ID=cds-AC56_RS20820;Parent=gene-AC56_RS20820;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=689,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418050.1;locus_tag=AC56_RS20820;partial=true;product=DUF6531 domain-containing protein;pseudo=true;transl_table=11
NZ_JJLS01000107.1	RefSeq	pseudogene	744	1158	.	+	.	ID=gene-AC56_RS28650;Name=AC56_RS28650;end_range=1158,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS28650;partial=true;pseudo=true
NZ_JJLS01000107.1	Protein Homology	CDS	744	1158	.	+	0	ID=cds-AC56_RS28650;Parent=gene-AC56_RS28650;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1158,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS28650;partial=true;product=IS4 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000108.1 1 2247
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000108.1	RefSeq	region	1	2247	.	+	.	ID=NZ_JJLS01000108.1:1..2247;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000108.1	RefSeq	gene	1	961	.	+	.	ID=gene-AC56_RS20815;Name=AC56_RS20815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20815;old_locus_tag=AC56_0219;partial=true;start_range=.,1
NZ_JJLS01000108.1	Protein Homology	CDS	1	961	.	+	1	ID=cds-WP_032282478.1-5;Parent=gene-AC56_RS20815;Dbxref=GenBank:WP_032282478.1;Name=WP_032282478.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS20815;partial=true;product=IS4-like element IS421 family transposase;protein_id=WP_032282478.1;start_range=.,1;transl_table=11
NZ_JJLS01000108.1	RefSeq	pseudogene	1139	2247	.	+	.	ID=gene-AC56_RS20810;Name=AC56_RS20810;end_range=2247,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS20810;old_locus_tag=AC56_0220;partial=true;pseudo=true;start_range=.,1139
NZ_JJLS01000108.1	Protein Homology	CDS	1139	2247	.	+	0	ID=cds-AC56_RS20810;Parent=gene-AC56_RS20810;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2247,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415030.1;locus_tag=AC56_RS20810;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1139;transl_table=11
##sequence-region NZ_JJLS01000109.1 1 5811
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000109.1	RefSeq	region	1	5811	.	+	.	ID=NZ_JJLS01000109.1:1..5811;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000109.1	RefSeq	gene	1	3342	.	+	.	ID=gene-AC56_RS28655;Name=AC56_RS28655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS28655;old_locus_tag=AC56_0221;partial=true;start_range=.,1
NZ_JJLS01000109.1	Protein Homology	CDS	1	3342	.	+	0	ID=cds-WP_050439672.1;Parent=gene-AC56_RS28655;Dbxref=GenBank:WP_050439672.1;Name=WP_050439672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001530200.1;locus_tag=AC56_RS28655;partial=true;product=RHS element core protein;protein_id=WP_050439672.1;start_range=.,1;transl_table=11
NZ_JJLS01000109.1	RefSeq	gene	3326	3808	.	+	.	ID=gene-AC56_RS33515;Name=ydcD;gbkey=Gene;gene=ydcD;gene_biotype=protein_coding;locus_tag=AC56_RS33515
NZ_JJLS01000109.1	Protein Homology	CDS	3326	3808	.	+	0	ID=cds-WP_032277853.1;Parent=gene-AC56_RS33515;Dbxref=GenBank:WP_032277853.1;Name=WP_032277853.1;gbkey=CDS;gene=ydcD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415974.1;locus_tag=AC56_RS33515;product=YdcD family protein;protein_id=WP_032277853.1;transl_table=11
NZ_JJLS01000109.1	RefSeq	gene	3723	3908	.	-	.	ID=gene-AC56_RS32615;Name=AC56_RS32615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS32615
NZ_JJLS01000109.1	Protein Homology	CDS	3723	3908	.	-	0	ID=cds-WP_120795385.1;Parent=gene-AC56_RS32615;Dbxref=GenBank:WP_120795385.1;Name=WP_120795385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518780.1;locus_tag=AC56_RS32615;product=protein YncO;protein_id=WP_120795385.1;transl_table=11
NZ_JJLS01000109.1	RefSeq	pseudogene	3990	5116	.	+	.	ID=gene-AC56_RS20805;Name=AC56_RS20805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS20805;old_locus_tag=AC56_0223;pseudo=true
NZ_JJLS01000109.1	Protein Homology	CDS	3990	5116	.	+	0	ID=cds-AC56_RS20805;Parent=gene-AC56_RS20805;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027427.1;locus_tag=AC56_RS20805;product=ISAs1 family transposase;pseudo=true;transl_table=11
NZ_JJLS01000109.1	RefSeq	pseudogene	5220	5811	.	+	.	ID=gene-AC56_RS20800;Name=AC56_RS20800;end_range=5811,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS20800;old_locus_tag=AC56_0224;partial=true;pseudo=true
NZ_JJLS01000109.1	Protein Homology	CDS	5220	5811	.	+	0	ID=cds-AC56_RS20800;Parent=gene-AC56_RS20800;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=5811,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AC56_RS20800;partial=true;product=ISAs1-like element ISEc1 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000110.1 1 49310
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000110.1	RefSeq	region	1	49310	.	+	.	ID=NZ_JJLS01000110.1:1..49310;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000110.1	RefSeq	pseudogene	1	366	.	-	.	ID=gene-AC56_RS32620;Name=AC56_RS32620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS32620;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000110.1	Protein Homology	CDS	1	366	.	-	0	ID=cds-AC56_RS32620;Parent=gene-AC56_RS32620;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS32620;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000110.1	RefSeq	pseudogene	424	519	.	+	.	ID=gene-AC56_RS33220;Name=AC56_RS33220;end_range=519,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33220;partial=true;pseudo=true;start_range=.,424
NZ_JJLS01000110.1	Protein Homology	CDS	424	519	.	+	0	ID=cds-AC56_RS33220;Parent=gene-AC56_RS33220;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=519,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AC56_RS33220;partial=true;product=hypothetical protein;pseudo=true;start_range=.,424;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	570	1340	.	-	.	ID=gene-AC56_RS20795;Name=yafV;gbkey=Gene;gene=yafV;gene_biotype=protein_coding;locus_tag=AC56_RS20795;old_locus_tag=AC56_0226
NZ_JJLS01000110.1	Protein Homology	CDS	570	1340	.	-	0	ID=cds-WP_001118040.1;Parent=gene-AC56_RS20795;Dbxref=GenBank:WP_001118040.1;Name=WP_001118040.1;gbkey=CDS;gene=yafV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308273.1;locus_tag=AC56_RS20795;product=2-oxoglutaramate amidase;protein_id=WP_001118040.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	1521	1967	.	+	.	ID=gene-AC56_RS20790;Name=ivy;gbkey=Gene;gene=ivy;gene_biotype=protein_coding;locus_tag=AC56_RS20790;old_locus_tag=AC56_0227
NZ_JJLS01000110.1	Protein Homology	CDS	1521	1967	.	+	0	ID=cds-WP_001308392.1;Parent=gene-AC56_RS20790;Dbxref=GenBank:WP_001308392.1;Name=WP_001308392.1;gbkey=CDS;gene=ivy;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308274.2;locus_tag=AC56_RS20790;product=Ivy family C-type lysozyme inhibitor;protein_id=WP_001308392.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	2010	4454	.	-	.	ID=gene-AC56_RS20785;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=AC56_RS20785;old_locus_tag=AC56_0228
NZ_JJLS01000110.1	Protein Homology	CDS	2010	4454	.	-	0	ID=cds-WP_000973107.1;Parent=gene-AC56_RS20785;Dbxref=GenBank:WP_000973107.1;Name=WP_000973107.1;Ontology_term=GO:0033539,GO:0003995,GO:0050660;gbkey=CDS;gene=fadE;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid beta-oxidation using acyl-CoA dehydrogenase|0033539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414756.2;locus_tag=AC56_RS20785;product=acyl-CoA dehydrogenase FadE;protein_id=WP_000973107.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	4694	5272	.	+	.	ID=gene-AC56_RS20780;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;locus_tag=AC56_RS20780;old_locus_tag=AC56_0229
NZ_JJLS01000110.1	Protein Homology	CDS	4694	5272	.	+	0	ID=cds-WP_000284050.1;Parent=gene-AC56_RS20780;Dbxref=GenBank:WP_000284050.1;Name=WP_000284050.1;Ontology_term=GO:1901135,GO:0008968;gbkey=CDS;gene=lpcA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308276.1;locus_tag=AC56_RS20780;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_000284050.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	5478	6245	.	+	.	ID=gene-AC56_RS20775;Name=yafJ;gbkey=Gene;gene=yafJ;gene_biotype=protein_coding;locus_tag=AC56_RS20775;old_locus_tag=AC56_0230
NZ_JJLS01000110.1	Protein Homology	CDS	5478	6245	.	+	0	ID=cds-WP_001365365.1;Parent=gene-AC56_RS20775;Dbxref=GenBank:WP_001365365.1;Name=WP_001365365.1;Ontology_term=GO:0006541,GO:0016740;gbkey=CDS;gene=yafJ;go_function=transferase activity|0016740||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414758.1;locus_tag=AC56_RS20775;product=class II glutamine amidotransferase;protein_id=WP_001365365.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	6216	6956	.	-	.	ID=gene-AC56_RS20770;Name=dpaA;gbkey=Gene;gene=dpaA;gene_biotype=protein_coding;locus_tag=AC56_RS20770;old_locus_tag=AC56_0231
NZ_JJLS01000110.1	Protein Homology	CDS	6216	6956	.	-	0	ID=cds-WP_001225679.1;Parent=gene-AC56_RS20770;Dbxref=GenBank:WP_001225679.1;Name=WP_001225679.1;gbkey=CDS;gene=dpaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308278.1;locus_tag=AC56_RS20770;product=peptidoglycan meso-diaminopimelic acid protein amidase;protein_id=WP_001225679.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	7112	7390	.	-	.	ID=gene-AC56_RS0125195;Name=yafQ;gbkey=Gene;gene=yafQ;gene_biotype=protein_coding;locus_tag=AC56_RS0125195;old_locus_tag=AC56_0232
NZ_JJLS01000110.1	Protein Homology	CDS	7112	7390	.	-	0	ID=cds-WP_000615979.1;Parent=gene-AC56_RS0125195;Dbxref=GenBank:WP_000615979.1;Name=WP_000615979.1;gbkey=CDS;gene=yafQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414760.1;locus_tag=AC56_RS0125195;product=type II toxin-antitoxin system mRNA interferase toxin YafQ;protein_id=WP_000615979.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	7393	7653	.	-	.	ID=gene-AC56_RS20765;Name=dinJ;gbkey=Gene;gene=dinJ;gene_biotype=protein_coding;locus_tag=AC56_RS20765;old_locus_tag=AC56_0233
NZ_JJLS01000110.1	Protein Homology	CDS	7393	7653	.	-	0	ID=cds-WP_000729704.1;Parent=gene-AC56_RS20765;Dbxref=GenBank:WP_000729704.1;Name=WP_000729704.1;gbkey=CDS;gene=dinJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308280.1;locus_tag=AC56_RS20765;product=type II toxin-antitoxin system antitoxin DinJ;protein_id=WP_000729704.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	7863	8612	.	+	.	ID=gene-AC56_RS20760;Name=yafL;gbkey=Gene;gene=yafL;gene_biotype=protein_coding;locus_tag=AC56_RS20760;old_locus_tag=AC56_0235
NZ_JJLS01000110.1	Protein Homology	CDS	7863	8612	.	+	0	ID=cds-WP_001301253.1;Parent=gene-AC56_RS20760;Dbxref=GenBank:WP_001301253.1;Name=WP_001301253.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;gene=yafL;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414762.1;locus_tag=AC56_RS20760;product=C40 family peptidase;protein_id=WP_001301253.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	8788	9285	.	+	.	ID=gene-AC56_RS20755;Name=rayT;gbkey=Gene;gene=rayT;gene_biotype=protein_coding;locus_tag=AC56_RS20755;old_locus_tag=AC56_0236
NZ_JJLS01000110.1	Protein Homology	CDS	8788	9285	.	+	0	ID=cds-WP_000006261.1;Parent=gene-AC56_RS20755;Dbxref=GenBank:WP_000006261.1;Name=WP_000006261.1;gbkey=CDS;gene=rayT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706228.1;locus_tag=AC56_RS20755;product=REP-associated tyrosine transposase RayT;protein_id=WP_000006261.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	9501	11594	.	-	.	ID=gene-AC56_RS20750;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=AC56_RS20750;old_locus_tag=AC56_0239
NZ_JJLS01000110.1	Protein Homology	CDS	9501	11594	.	-	0	ID=cds-WP_032277857.1;Parent=gene-AC56_RS20750;Dbxref=GenBank:WP_032277857.1;Name=WP_032277857.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=flhA;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001140833.1;locus_tag=AC56_RS20750;product=flagellar biosynthesis protein FlhA;protein_id=WP_032277857.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	11578	12717	.	-	.	ID=gene-AC56_RS20745;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=AC56_RS20745;old_locus_tag=AC56_0240
NZ_JJLS01000110.1	Protein Homology	CDS	11578	12717	.	-	0	ID=cds-WP_000785660.1;Parent=gene-AC56_RS20745;Dbxref=GenBank:WP_000785660.1;Name=WP_000785660.1;Ontology_term=GO:0009306,GO:0015031,GO:0044780,GO:0016020;gbkey=CDS;gene=flhB;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA,protein transport|0015031||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016236920.1;locus_tag=AC56_RS20745;product=flagellar type III secretion system protein FlhB;protein_id=WP_000785660.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	12707	13489	.	-	.	ID=gene-AC56_RS20740;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=AC56_RS20740;old_locus_tag=AC56_0241
NZ_JJLS01000110.1	Protein Homology	CDS	12707	13489	.	-	0	ID=cds-WP_001260505.1;Parent=gene-AC56_RS20740;Dbxref=GenBank:WP_001260505.1;Name=WP_001260505.1;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001260509.1;locus_tag=AC56_RS20740;product=flagellar biosynthetic protein FliR;protein_id=WP_001260505.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	13491	13763	.	-	.	ID=gene-AC56_RS20735;Name=AC56_RS20735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20735;old_locus_tag=AC56_0242
NZ_JJLS01000110.1	Protein Homology	CDS	13491	13763	.	-	0	ID=cds-WP_000958542.1;Parent=gene-AC56_RS20735;Dbxref=GenBank:WP_000958542.1;Name=WP_000958542.1;Ontology_term=GO:0009306,GO:0044780,GO:0005886,GO:0009425;gbkey=CDS;go_component=plasma membrane|0005886||IEA,bacterial-type flagellum basal body|0009425||IEA;go_process=protein secretion|0009306||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001341234.1;locus_tag=AC56_RS20735;product=flagellar biosynthetic protein FliQ;protein_id=WP_000958542.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	13766	14518	.	-	.	ID=gene-AC56_RS20730;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=AC56_RS20730;old_locus_tag=AC56_0243
NZ_JJLS01000110.1	Protein Homology	CDS	13766	14518	.	-	0	ID=cds-WP_000830274.1;Parent=gene-AC56_RS20730;Dbxref=GenBank:WP_000830274.1;Name=WP_000830274.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=fliP;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538309.1;locus_tag=AC56_RS20730;product=flagellar type III secretion system pore protein FliP;protein_id=WP_000830274.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	14515	14886	.	-	.	ID=gene-AC56_RS20725;Name=AC56_RS20725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20725;old_locus_tag=AC56_0244
NZ_JJLS01000110.1	Protein Homology	CDS	14515	14886	.	-	0	ID=cds-WP_000043127.1;Parent=gene-AC56_RS20725;Dbxref=GenBank:WP_000043127.1;Name=WP_000043127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233859.1;locus_tag=AC56_RS20725;product=FliM/FliN family flagellar motor switch protein;protein_id=WP_000043127.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	14879	15730	.	-	.	ID=gene-AC56_RS20720;Name=AC56_RS20720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20720;old_locus_tag=AC56_0245
NZ_JJLS01000110.1	Protein Homology	CDS	14879	15730	.	-	0	ID=cds-WP_000922501.1;Parent=gene-AC56_RS20720;Dbxref=GenBank:WP_000922501.1;Name=WP_000922501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000922508.1;locus_tag=AC56_RS20720;product=FliM/FliN family flagellar motor switch protein;protein_id=WP_000922501.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	16117	17103	.	+	.	ID=gene-AC56_RS20715;Name=AC56_RS20715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20715;old_locus_tag=AC56_0246
NZ_JJLS01000110.1	Protein Homology	CDS	16117	17103	.	+	0	ID=cds-WP_001292198.1;Parent=gene-AC56_RS20715;Dbxref=GenBank:WP_001292198.1;Name=WP_001292198.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001292201.1;locus_tag=AC56_RS20715;product=sigma-54 interaction domain-containing protein;protein_id=WP_001292198.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	17118	17459	.	+	.	ID=gene-AC56_RS20710;Name=AC56_RS20710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20710;old_locus_tag=AC56_0247
NZ_JJLS01000110.1	Protein Homology	CDS	17118	17459	.	+	0	ID=cds-WP_032277858.1;Parent=gene-AC56_RS20710;Dbxref=GenBank:WP_032277858.1;Name=WP_032277858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538312.1;locus_tag=AC56_RS20710;product=flagellar hook-basal body complex protein FliE;protein_id=WP_032277858.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	17464	19110	.	+	.	ID=gene-AC56_RS20705;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=AC56_RS20705;old_locus_tag=AC56_0248
NZ_JJLS01000110.1	Protein Homology	CDS	17464	19110	.	+	0	ID=cds-WP_021574978.1;Parent=gene-AC56_RS20705;Dbxref=GenBank:WP_021574978.1;Name=WP_021574978.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001643010.1;locus_tag=AC56_RS20705;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WP_021574978.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	19088	20098	.	+	.	ID=gene-AC56_RS20700;Name=AC56_RS20700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20700;old_locus_tag=AC56_0249
NZ_JJLS01000110.1	Protein Homology	CDS	19088	20098	.	+	0	ID=cds-WP_032277859.1;Parent=gene-AC56_RS20700;Dbxref=GenBank:WP_032277859.1;Name=WP_032277859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001293121.1;locus_tag=AC56_RS20700;product=flagellar motor switch protein FliG;protein_id=WP_032277859.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	20102	20812	.	+	.	ID=gene-AC56_RS20695;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=AC56_RS20695;old_locus_tag=AC56_0250
NZ_JJLS01000110.1	Protein Homology	CDS	20102	20812	.	+	0	ID=cds-WP_000151519.1;Parent=gene-AC56_RS20695;Dbxref=GenBank:WP_000151519.1;Name=WP_000151519.1;gbkey=CDS;gene=fliH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521882.1;locus_tag=AC56_RS20695;product=flagellar assembly protein FliH;protein_id=WP_000151519.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	20805	22058	.	+	.	ID=gene-AC56_RS20690;Name=AC56_RS20690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20690;old_locus_tag=AC56_0251
NZ_JJLS01000110.1	Protein Homology	CDS	20805	22058	.	+	0	ID=cds-WP_032277860.1;Parent=gene-AC56_RS20690;Dbxref=GenBank:WP_032277860.1;Name=WP_032277860.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001279390.1;locus_tag=AC56_RS20690;product=FliI/YscN family ATPase;protein_id=WP_032277860.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	22061	22495	.	+	.	ID=gene-AC56_RS20685;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=AC56_RS20685;old_locus_tag=AC56_0252
NZ_JJLS01000110.1	Protein Homology	CDS	22061	22495	.	+	0	ID=cds-WP_032277861.1;Parent=gene-AC56_RS20685;Dbxref=GenBank:WP_032277861.1;Name=WP_032277861.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248915.1;locus_tag=AC56_RS20685;product=flagellar export protein FliJ;protein_id=WP_032277861.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	22498	22893	.	+	.	ID=gene-AC56_RS20680;Name=AC56_RS20680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20680;old_locus_tag=AC56_0253
NZ_JJLS01000110.1	Protein Homology	CDS	22498	22893	.	+	0	ID=cds-WP_000859525.1;Parent=gene-AC56_RS20680;Dbxref=GenBank:WP_000859525.1;Name=WP_000859525.1;Ontology_term=GO:0009058,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001637450.1;locus_tag=AC56_RS20680;product=adenylyltransferase/cytidyltransferase family protein;protein_id=WP_000859525.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	23011	25455	.	-	.	ID=gene-AC56_RS20675;Name=AC56_RS20675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20675;old_locus_tag=AC56_0254
NZ_JJLS01000110.1	Protein Homology	CDS	23011	25455	.	-	0	ID=cds-WP_032282544.1;Parent=gene-AC56_RS20675;Dbxref=GenBank:WP_032282544.1;Name=WP_032282544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001412594.1;locus_tag=AC56_RS20675;product=glycosyltransferase;protein_id=WP_032282544.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	25634	26563	.	-	.	ID=gene-AC56_RS20670;Name=AC56_RS20670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20670;old_locus_tag=AC56_0255
NZ_JJLS01000110.1	Protein Homology	CDS	25634	26563	.	-	0	ID=cds-WP_000008069.1;Parent=gene-AC56_RS20670;Dbxref=GenBank:WP_000008069.1;Name=WP_000008069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000008086.1;locus_tag=AC56_RS20670;product=hypothetical protein;protein_id=WP_000008069.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	26690	27118	.	-	.	ID=gene-AC56_RS20665;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=protein_coding;locus_tag=AC56_RS20665;old_locus_tag=AC56_0256
NZ_JJLS01000110.1	Protein Homology	CDS	26690	27118	.	-	0	ID=cds-WP_000027799.1;Parent=gene-AC56_RS20665;Dbxref=GenBank:WP_000027799.1;Name=WP_000027799.1;Ontology_term=GO:0044780,GO:0005515;gbkey=CDS;gene=flgN;go_function=protein binding|0005515||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001329715.1;locus_tag=AC56_RS20665;product=flagellar protein FlgN;protein_id=WP_000027799.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	27131	27409	.	-	.	ID=gene-AC56_RS20660;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=AC56_RS20660;old_locus_tag=AC56_0257
NZ_JJLS01000110.1	Protein Homology	CDS	27131	27409	.	-	0	ID=cds-WP_000705401.1;Parent=gene-AC56_RS20660;Dbxref=GenBank:WP_000705401.1;Name=WP_000705401.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000705216.1;locus_tag=AC56_RS20660;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_000705401.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	27490	28227	.	-	.	ID=gene-AC56_RS20655;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=AC56_RS20655;old_locus_tag=AC56_0258
NZ_JJLS01000110.1	Protein Homology	CDS	27490	28227	.	-	0	ID=cds-WP_000009754.1;Parent=gene-AC56_RS20655;Dbxref=GenBank:WP_000009754.1;Name=WP_000009754.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233868.1;locus_tag=AC56_RS20655;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_000009754.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	28309	28644	.	+	.	ID=gene-AC56_RS20650;Name=AC56_RS20650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20650;old_locus_tag=AC56_0259
NZ_JJLS01000110.1	Protein Homology	CDS	28309	28644	.	+	0	ID=cds-WP_032277863.1;Parent=gene-AC56_RS20650;Dbxref=GenBank:WP_032277863.1;Name=WP_032277863.1;Ontology_term=GO:0071973;gbkey=CDS;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003838822.1;locus_tag=AC56_RS20650;product=flagellar basal body protein;protein_id=WP_032277863.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	28647	29078	.	+	.	ID=gene-AC56_RS20645;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=AC56_RS20645;old_locus_tag=AC56_0260
NZ_JJLS01000110.1	Protein Homology	CDS	28647	29078	.	+	0	ID=cds-WP_000010949.1;Parent=gene-AC56_RS20645;Dbxref=GenBank:WP_000010949.1;Name=WP_000010949.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000010944.1;locus_tag=AC56_RS20645;product=flagellar basal body rod protein FlgC;protein_id=WP_000010949.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	29078	29791	.	+	.	ID=gene-AC56_RS20640;Name=AC56_RS20640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20640;old_locus_tag=AC56_0261
NZ_JJLS01000110.1	Protein Homology	CDS	29078	29791	.	+	0	ID=cds-WP_001093675.1;Parent=gene-AC56_RS20640;Dbxref=GenBank:WP_001093675.1;Name=WP_001093675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001508388.1;locus_tag=AC56_RS20640;product=flagellar hook capping FlgD N-terminal domain-containing protein;protein_id=WP_001093675.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	29951	31153	.	+	.	ID=gene-AC56_RS20635;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=AC56_RS20635;old_locus_tag=AC56_0263
NZ_JJLS01000110.1	Protein Homology	CDS	29951	31153	.	+	0	ID=cds-WP_032277864.1;Parent=gene-AC56_RS20635;Dbxref=GenBank:WP_032277864.1;Name=WP_032277864.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904671.1;locus_tag=AC56_RS20635;product=flagellar hook protein FlgE;protein_id=WP_032277864.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	31153	31890	.	+	.	ID=gene-AC56_RS20630;Name=AC56_RS20630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20630;old_locus_tag=AC56_0264
NZ_JJLS01000110.1	Protein Homology	CDS	31153	31890	.	+	0	ID=cds-WP_000375468.1;Parent=gene-AC56_RS20630;Dbxref=GenBank:WP_000375468.1;Name=WP_000375468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000375458.1;locus_tag=AC56_RS20630;product=flagellar basal body rod protein FlgF;protein_id=WP_000375468.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	31969	32754	.	+	.	ID=gene-AC56_RS20625;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=AC56_RS20625;old_locus_tag=AC56_0265
NZ_JJLS01000110.1	Protein Homology	CDS	31969	32754	.	+	0	ID=cds-WP_000990538.1;Parent=gene-AC56_RS20625;Dbxref=GenBank:WP_000990538.1;Name=WP_000990538.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003838810.1;locus_tag=AC56_RS20625;product=flagellar basal-body rod protein FlgG;protein_id=WP_000990538.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	32957	33622	.	+	.	ID=gene-AC56_RS20620;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=AC56_RS20620;old_locus_tag=AC56_0266
NZ_JJLS01000110.1	Protein Homology	CDS	32957	33622	.	+	0	ID=cds-WP_000800871.1;Parent=gene-AC56_RS20620;Dbxref=GenBank:WP_000800871.1;Name=WP_000800871.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211429.1;locus_tag=AC56_RS20620;product=flagellar basal body L-ring protein FlgH;protein_id=WP_000800871.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	33637	34737	.	+	.	ID=gene-AC56_RS20615;Name=AC56_RS20615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20615;old_locus_tag=AC56_0267
NZ_JJLS01000110.1	Protein Homology	CDS	33637	34737	.	+	0	ID=cds-WP_032277865.1;Parent=gene-AC56_RS20615;Dbxref=GenBank:WP_032277865.1;Name=WP_032277865.1;Ontology_term=GO:0071973,GO:0005198,GO:0009428,GO:0030288;gbkey=CDS;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA,outer membrane-bounded periplasmic space|0030288||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001181884.1;locus_tag=AC56_RS20615;product=flagellar basal body P-ring protein FlgI;protein_id=WP_032277865.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	34737	35036	.	+	.	ID=gene-AC56_RS20610;Name=AC56_RS20610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20610;old_locus_tag=AC56_0268
NZ_JJLS01000110.1	Protein Homology	CDS	34737	35036	.	+	0	ID=cds-WP_000700150.1;Parent=gene-AC56_RS20610;Dbxref=GenBank:WP_000700150.1;Name=WP_000700150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000867283.1;locus_tag=AC56_RS20610;product=rod-binding protein;protein_id=WP_000700150.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	35219	36595	.	+	.	ID=gene-AC56_RS20605;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=AC56_RS20605;old_locus_tag=AC56_0269
NZ_JJLS01000110.1	Protein Homology	CDS	35219	36595	.	+	0	ID=cds-WP_021553265.1;Parent=gene-AC56_RS20605;Dbxref=GenBank:WP_021553265.1;Name=WP_021553265.1;Ontology_term=GO:0044780,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000367241.1;locus_tag=AC56_RS20605;product=flagellar hook-associated protein FlgK;protein_id=WP_021553265.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	36610	37539	.	+	.	ID=gene-AC56_RS20600;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=AC56_RS20600;old_locus_tag=AC56_0270
NZ_JJLS01000110.1	Protein Homology	CDS	36610	37539	.	+	0	ID=cds-WP_032277867.1;Parent=gene-AC56_RS20600;Dbxref=GenBank:WP_032277867.1;Name=WP_032277867.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219239.1;locus_tag=AC56_RS20600;product=flagellar hook-associated protein FlgL;protein_id=WP_032277867.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	37556	38533	.	+	.	ID=gene-AC56_RS20595;Name=AC56_RS20595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20595;old_locus_tag=AC56_0271
NZ_JJLS01000110.1	Protein Homology	CDS	37556	38533	.	+	0	ID=cds-WP_032277868.1;Parent=gene-AC56_RS20595;Dbxref=GenBank:WP_032277868.1;Name=WP_032277868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001195949.1;locus_tag=AC56_RS20595;product=hypothetical protein;protein_id=WP_032277868.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	38588	39430	.	-	.	ID=gene-AC56_RS20590;Name=AC56_RS20590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20590;old_locus_tag=AC56_0272
NZ_JJLS01000110.1	Protein Homology	CDS	38588	39430	.	-	0	ID=cds-WP_032277869.1;Parent=gene-AC56_RS20590;Dbxref=GenBank:WP_032277869.1;Name=WP_032277869.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000022370.1;locus_tag=AC56_RS20590;product=transcriptional regulator;protein_id=WP_032277869.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	39916	40830	.	+	.	ID=gene-AC56_RS20585;Name=lafA;gbkey=Gene;gene=lafA;gene_biotype=protein_coding;locus_tag=AC56_RS20585;old_locus_tag=AC56_0273
NZ_JJLS01000110.1	Protein Homology	CDS	39916	40830	.	+	0	ID=cds-WP_000949083.1;Parent=gene-AC56_RS20585;Dbxref=GenBank:WP_000949083.1;Name=WP_000949083.1;gbkey=CDS;gene=lafA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001570969.1;locus_tag=AC56_RS20585;product=lateral flagellin LafA;protein_id=WP_000949083.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	41121	42437	.	+	.	ID=gene-AC56_RS20580;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=AC56_RS20580;old_locus_tag=AC56_0275
NZ_JJLS01000110.1	Protein Homology	CDS	41121	42437	.	+	0	ID=cds-WP_032277870.1;Parent=gene-AC56_RS20580;Dbxref=GenBank:WP_032277870.1;Name=WP_032277870.1;Ontology_term=GO:0007155,GO:0009288;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000609688.1;locus_tag=AC56_RS20580;product=flagellar filament capping protein FliD;protein_id=WP_032277870.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	42460	42852	.	+	.	ID=gene-AC56_RS20575;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=AC56_RS20575;old_locus_tag=AC56_0276
NZ_JJLS01000110.1	Protein Homology	CDS	42460	42852	.	+	0	ID=cds-WP_000285319.1;Parent=gene-AC56_RS20575;Dbxref=GenBank:WP_000285319.1;Name=WP_000285319.1;Ontology_term=GO:0044780;gbkey=CDS;gene=fliS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000285320.1;locus_tag=AC56_RS20575;product=flagellar export chaperone FliS;protein_id=WP_000285319.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	42959	43168	.	+	.	ID=gene-AC56_RS0125200;Name=AC56_RS0125200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0125200;old_locus_tag=AC56_0277
NZ_JJLS01000110.1	Protein Homology	CDS	42959	43168	.	+	0	ID=cds-WP_248784842.1;Parent=gene-AC56_RS0125200;Dbxref=GenBank:WP_248784842.1;Name=WP_248784842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001644825.1;locus_tag=AC56_RS0125200;product=sorbitol dehydrogenase family protein;protein_id=WP_248784842.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	43165	44226	.	+	.	ID=gene-AC56_RS20570;Name=AC56_RS20570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20570;old_locus_tag=AC56_0278
NZ_JJLS01000110.1	Protein Homology	CDS	43165	44226	.	+	0	ID=cds-WP_001067471.1;Parent=gene-AC56_RS20570;Dbxref=GenBank:WP_001067471.1;Name=WP_001067471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001067462.1;locus_tag=AC56_RS20570;product=flagellar hook-length control protein FliK;protein_id=WP_001067471.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	44234	44701	.	+	.	ID=gene-AC56_RS20565;Name=AC56_RS20565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20565;old_locus_tag=AC56_0279
NZ_JJLS01000110.1	Protein Homology	CDS	44234	44701	.	+	0	ID=cds-WP_000725257.1;Parent=gene-AC56_RS20565;Dbxref=GenBank:WP_000725257.1;Name=WP_000725257.1;Ontology_term=GO:0006935,GO:0071978,GO:0009425;gbkey=CDS;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent swarming motility|0071978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521900.1;locus_tag=AC56_RS20565;product=flagellar basal body-associated FliL family protein;protein_id=WP_000725257.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	44721	45437	.	+	.	ID=gene-AC56_RS20560;Name=AC56_RS20560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20560;old_locus_tag=AC56_0280
NZ_JJLS01000110.1	Protein Homology	CDS	44721	45437	.	+	0	ID=cds-WP_032277871.1;Parent=gene-AC56_RS20560;Dbxref=GenBank:WP_032277871.1;Name=WP_032277871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000938732.1;locus_tag=AC56_RS20560;product=FliA/WhiG family RNA polymerase sigma factor;protein_id=WP_032277871.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	45450	46313	.	+	.	ID=gene-AC56_RS20555;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=AC56_RS20555;old_locus_tag=AC56_0281
NZ_JJLS01000110.1	Protein Homology	CDS	45450	46313	.	+	0	ID=cds-WP_003569842.1;Parent=gene-AC56_RS20555;Dbxref=GenBank:WP_003569842.1;Name=WP_003569842.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001169515.1;locus_tag=AC56_RS20555;product=flagellar motor stator protein MotA;protein_id=WP_003569842.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	46316	47239	.	+	.	ID=gene-AC56_RS20550;Name=lafU;gbkey=Gene;gene=lafU;gene_biotype=protein_coding;locus_tag=AC56_RS20550;old_locus_tag=AC56_0282
NZ_JJLS01000110.1	Protein Homology	CDS	46316	47239	.	+	0	ID=cds-WP_064734936.1;Parent=gene-AC56_RS20550;Dbxref=GenBank:WP_064734936.1;Name=WP_064734936.1;gbkey=CDS;gene=lafU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521902.1;locus_tag=AC56_RS20550;product=putative lateral flagellar export/assembly protein LafU;protein_id=WP_064734936.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	47310	48365	.	+	.	ID=gene-AC56_RS20545;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=AC56_RS20545;old_locus_tag=AC56_0283
NZ_JJLS01000110.1	Protein Homology	CDS	47310	48365	.	+	0	ID=cds-WP_001226164.1;Parent=gene-AC56_RS20545;Dbxref=GenBank:WP_001226164.1;Name=WP_001226164.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414766.1;locus_tag=AC56_RS20545;product=DNA polymerase IV;protein_id=WP_001226164.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	gene	48417	48710	.	+	.	ID=gene-AC56_RS20540;Name=yafN;gbkey=Gene;gene=yafN;gene_biotype=protein_coding;locus_tag=AC56_RS20540;old_locus_tag=AC56_0284
NZ_JJLS01000110.1	Protein Homology	CDS	48417	48710	.	+	0	ID=cds-WP_000554757.1;Parent=gene-AC56_RS20540;Dbxref=GenBank:WP_000554757.1;Name=WP_000554757.1;gbkey=CDS;gene=yafN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308286.1;locus_tag=AC56_RS20540;product=type I toxin-antitoxin system antitoxin YafN;protein_id=WP_000554757.1;transl_table=11
NZ_JJLS01000110.1	RefSeq	pseudogene	48713	48820	.	+	.	ID=gene-AC56_RS32625;Name=AC56_RS32625;end_range=48820,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS32625;partial=true;pseudo=true
NZ_JJLS01000110.1	Protein Homology	CDS	48713	48820	.	+	0	ID=cds-AC56_RS32625;Parent=gene-AC56_RS32625;Note=YafO overproduction induces toxicity%3B it is believed to be the toxin of a toxin-antitoxin pair%3B unknown function%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=48820,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308287.1;locus_tag=AC56_RS32625;partial=true;product=type II toxin-antitoxin system YafO family toxin;pseudo=true;transl_table=11
NZ_JJLS01000110.1	RefSeq	pseudogene	48827	49310	.	-	.	ID=gene-AC56_RS20535;Name=AC56_RS20535;end_range=49310,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS20535;old_locus_tag=AC56_0285;partial=true;pseudo=true
NZ_JJLS01000110.1	Protein Homology	CDS	48827	49310	.	-	2	ID=cds-AC56_RS20535;Parent=gene-AC56_RS20535;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0004803;end_range=49310,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS20535;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000111.1 1 13454
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000111.1	RefSeq	region	1	13454	.	+	.	ID=NZ_JJLS01000111.1:1..13454;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000111.1	RefSeq	pseudogene	1	376	.	-	.	ID=gene-AC56_RS0125205;Name=AC56_RS0125205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0125205;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000111.1	Protein Homology	CDS	1	376	.	-	0	ID=cds-AC56_RS0125205;Parent=gene-AC56_RS0125205;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS0125205;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000111.1	RefSeq	pseudogene	434	526	.	+	.	ID=gene-AC56_RS30990;Name=prfH;gbkey=Gene;gene=prfH;gene_biotype=pseudogene;locus_tag=AC56_RS30990;partial=true;pseudo=true;start_range=.,434
NZ_JJLS01000111.1	Protein Homology	CDS	434	526	.	+	0	ID=cds-AC56_RS30990;Parent=gene-AC56_RS30990;Note=similar to release factor 1 and 2%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=prfH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000602105.1;locus_tag=AC56_RS30990;partial=true;product=peptide chain release factor H;pseudo=true;start_range=.,434;transl_table=11
NZ_JJLS01000111.1	RefSeq	gene	583	2040	.	-	.	ID=gene-AC56_RS20525;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=AC56_RS20525;old_locus_tag=AC56_0287
NZ_JJLS01000111.1	Protein Homology	CDS	583	2040	.	-	0	ID=cds-WP_032277874.1;Parent=gene-AC56_RS20525;Dbxref=GenBank:WP_032277874.1;Name=WP_032277874.1;Ontology_term=GO:0006508,GO:0016787;gbkey=CDS;gene=pepD;go_function=hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308291.1;locus_tag=AC56_RS20525;product=cytosol nonspecific dipeptidase;protein_id=WP_032277874.1;transl_table=11
NZ_JJLS01000111.1	RefSeq	gene	2301	2759	.	+	.	ID=gene-AC56_RS20520;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=AC56_RS20520;old_locus_tag=AC56_0288
NZ_JJLS01000111.1	Protein Homology	CDS	2301	2759	.	+	0	ID=cds-WP_001291990.1;Parent=gene-AC56_RS20520;Dbxref=GenBank:WP_001291990.1;Name=WP_001291990.1;Ontology_term=GO:0009116,GO:0000310;gbkey=CDS;gene=gpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308292.1;locus_tag=AC56_RS20520;product=xanthine phosphoribosyltransferase;protein_id=WP_001291990.1;transl_table=11
NZ_JJLS01000111.1	RefSeq	gene	2851	4095	.	+	.	ID=gene-AC56_RS20515;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=AC56_RS20515;old_locus_tag=AC56_0289
NZ_JJLS01000111.1	Protein Homology	CDS	2851	4095	.	+	0	ID=cds-WP_032277875.1;Parent=gene-AC56_RS20515;Dbxref=GenBank:WP_032277875.1;Name=WP_032277875.1;Ontology_term=GO:0016788;gbkey=CDS;gene=frsA;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414774.1;locus_tag=AC56_RS20515;product=esterase FrsA;protein_id=WP_032277875.1;transl_table=11
NZ_JJLS01000111.1	RefSeq	gene	4153	4554	.	+	.	ID=gene-AC56_RS20510;Name=crl;gbkey=Gene;gene=crl;gene_biotype=protein_coding;locus_tag=AC56_RS20510;old_locus_tag=AC56_0290
NZ_JJLS01000111.1	Protein Homology	CDS	4153	4554	.	+	0	ID=cds-WP_032277876.1;Parent=gene-AC56_RS20510;Dbxref=GenBank:WP_032277876.1;Name=WP_032277876.1;Ontology_term=GO:0045893;gbkey=CDS;gene=crl;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308294.1;locus_tag=AC56_RS20510;product=sigma factor-binding protein Crl;protein_id=WP_032277876.1;transl_table=11
NZ_JJLS01000111.1	RefSeq	gene	4593	5648	.	-	.	ID=gene-AC56_RS20505;Name=phoE;gbkey=Gene;gene=phoE;gene_biotype=protein_coding;locus_tag=AC56_RS20505;old_locus_tag=AC56_0291
NZ_JJLS01000111.1	Protein Homology	CDS	4593	5648	.	-	0	ID=cds-WP_032277877.1;Parent=gene-AC56_RS20505;Dbxref=GenBank:WP_032277877.1;Name=WP_032277877.1;Ontology_term=GO:0034220,GO:0015288,GO:0016020;gbkey=CDS;gene=phoE;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308295.1;locus_tag=AC56_RS20505;product=phosphoporin PhoE;protein_id=WP_032277877.1;transl_table=11
NZ_JJLS01000111.1	RefSeq	gene	5936	7039	.	+	.	ID=gene-AC56_RS20500;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=AC56_RS20500;old_locus_tag=AC56_0292
NZ_JJLS01000111.1	Protein Homology	CDS	5936	7039	.	+	0	ID=cds-WP_032277878.1;Parent=gene-AC56_RS20500;Dbxref=GenBank:WP_032277878.1;Name=WP_032277878.1;Ontology_term=GO:0006561,GO:0004349,GO:0005737;gbkey=CDS;gene=proB;go_component=cytoplasm|0005737||IEA;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308296.1;locus_tag=AC56_RS20500;product=glutamate 5-kinase;protein_id=WP_032277878.1;transl_table=11
NZ_JJLS01000111.1	RefSeq	gene	7051	8304	.	+	.	ID=gene-AC56_RS20495;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=AC56_RS20495;old_locus_tag=AC56_0293
NZ_JJLS01000111.1	Protein Homology	CDS	7051	8304	.	+	0	ID=cds-WP_000893278.1;Parent=gene-AC56_RS20495;Dbxref=GenBank:WP_000893278.1;Name=WP_000893278.1;Ontology_term=GO:0006561,GO:0004350;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414778.1;locus_tag=AC56_RS20495;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_000893278.1;transl_table=11
NZ_JJLS01000111.1	RefSeq	gene	8419	8494	.	+	.	ID=gene-AC56_RS20490;Name=AC56_RS20490;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS20490;old_locus_tag=AC56_0294
NZ_JJLS01000111.1	tRNAscan-SE	tRNA	8419	8494	.	+	.	ID=rna-AC56_RS20490;Parent=gene-AC56_RS20490;anticodon=(pos:8452..8454);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS20490;product=tRNA-Thr
NZ_JJLS01000111.1	tRNAscan-SE	exon	8419	8494	.	+	.	ID=exon-AC56_RS20490-1;Parent=rna-AC56_RS20490;anticodon=(pos:8452..8454);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS20490;product=tRNA-Thr
NZ_JJLS01000111.1	RefSeq	gene	9194	10195	.	+	.	ID=gene-AC56_RS20485;Name=AC56_RS20485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20485;old_locus_tag=AC56_0295
NZ_JJLS01000111.1	Protein Homology	CDS	9194	10195	.	+	0	ID=cds-WP_001393694.1;Parent=gene-AC56_RS20485;Dbxref=GenBank:WP_001393694.1;Name=WP_001393694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000508501.1;locus_tag=AC56_RS20485;product=hypothetical protein;protein_id=WP_001393694.1;transl_table=11
NZ_JJLS01000111.1	RefSeq	gene	10195	11274	.	+	.	ID=gene-AC56_RS20480;Name=AC56_RS20480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20480;old_locus_tag=AC56_0296
NZ_JJLS01000111.1	Protein Homology	CDS	10195	11274	.	+	0	ID=cds-WP_021570024.1;Parent=gene-AC56_RS20480;Dbxref=GenBank:WP_021570024.1;Name=WP_021570024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151008.1;locus_tag=AC56_RS20480;product=hypothetical protein;protein_id=WP_021570024.1;transl_table=11
NZ_JJLS01000111.1	RefSeq	gene	11261	11938	.	+	.	ID=gene-AC56_RS20475;Name=AC56_RS20475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20475;old_locus_tag=AC56_0297
NZ_JJLS01000111.1	Protein Homology	CDS	11261	11938	.	+	0	ID=cds-WP_001395317.1;Parent=gene-AC56_RS20475;Dbxref=GenBank:WP_001395317.1;Name=WP_001395317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395317.1;locus_tag=AC56_RS20475;product=hypothetical protein;protein_id=WP_001395317.1;transl_table=11
NZ_JJLS01000111.1	RefSeq	gene	12595	13454	.	-	.	ID=gene-AC56_RS20470;Name=AC56_RS20470;end_range=13454,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20470;old_locus_tag=AC56_0298;partial=true
NZ_JJLS01000111.1	Protein Homology	CDS	12595	13454	.	-	2	ID=cds-WP_032282484.1-2;Parent=gene-AC56_RS20470;Dbxref=GenBank:WP_032282484.1;Name=WP_032282484.1;Ontology_term=GO:0004803;end_range=13454,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AC56_RS20470;partial=true;product=IS3 family transposase;protein_id=WP_032282484.1;transl_table=11
##sequence-region NZ_JJLS01000112.1 1 1169
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000112.1	RefSeq	region	1	1169	.	+	.	ID=NZ_JJLS01000112.1:1..1169;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000112.1	RefSeq	gene	1	391	.	+	.	ID=gene-AC56_RS20465;Name=AC56_RS20465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20465;old_locus_tag=AC56_0299;partial=true;start_range=.,1
NZ_JJLS01000112.1	Protein Homology	CDS	1	391	.	+	1	ID=cds-WP_204361851.1;Parent=gene-AC56_RS20465;Dbxref=GenBank:WP_204361851.1;Name=WP_204361851.1;Ontology_term=GO:0030244,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001639984.1;locus_tag=AC56_RS20465;partial=true;product=cellulose synthase subunit BcsC-related outer membrane protein;protein_id=WP_204361851.1;start_range=.,1;transl_table=11
NZ_JJLS01000112.1	RefSeq	pseudogene	609	1169	.	-	.	ID=gene-AC56_RS20460;Name=AC56_RS20460;end_range=1169,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS20460;old_locus_tag=AC56_0300;partial=true;pseudo=true
NZ_JJLS01000112.1	Protein Homology	CDS	609	1169	.	-	1	ID=cds-AC56_RS20460;Parent=gene-AC56_RS20460;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0004803;end_range=1169,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS20460;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000113.1 1 23609
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000113.1	RefSeq	region	1	23609	.	+	.	ID=NZ_JJLS01000113.1:1..23609;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000113.1	RefSeq	pseudogene	1	307	.	+	.	ID=gene-AC56_RS20455;Name=AC56_RS20455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS20455;old_locus_tag=AC56_0301;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000113.1	Protein Homology	CDS	1	307	.	+	1	ID=cds-AC56_RS20455;Parent=gene-AC56_RS20455;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134766.1;locus_tag=AC56_RS20455;partial=true;product=DNA circularization protein;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000113.1	RefSeq	gene	304	1383	.	+	.	ID=gene-AC56_RS20450;Name=AC56_RS20450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20450;old_locus_tag=AC56_0302
NZ_JJLS01000113.1	Protein Homology	CDS	304	1383	.	+	0	ID=cds-WP_032277694.1-3;Parent=gene-AC56_RS20450;Dbxref=GenBank:WP_032277694.1;Name=WP_032277694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559673.1;locus_tag=AC56_RS20450;product=phage baseplate assembly protein;protein_id=WP_032277694.1;transl_table=11
NZ_JJLS01000113.1	RefSeq	gene	1383	1931	.	+	.	ID=gene-AC56_RS20445;Name=AC56_RS20445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20445;old_locus_tag=AC56_0303
NZ_JJLS01000113.1	Protein Homology	CDS	1383	1931	.	+	0	ID=cds-WP_001259074.1-4;Parent=gene-AC56_RS20445;Dbxref=GenBank:WP_001259074.1;Name=WP_001259074.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364403.1;locus_tag=AC56_RS20445;product=phage baseplate assembly protein V;protein_id=WP_001259074.1;transl_table=11
NZ_JJLS01000113.1	RefSeq	gene	1931	2356	.	+	.	ID=gene-AC56_RS20440;Name=AC56_RS20440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20440;old_locus_tag=AC56_0304
NZ_JJLS01000113.1	Protein Homology	CDS	1931	2356	.	+	0	ID=cds-WP_000424732.1-4;Parent=gene-AC56_RS20440;Dbxref=GenBank:WP_000424732.1;Name=WP_000424732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000424727.1;locus_tag=AC56_RS20440;product=phage GP46 family protein;protein_id=WP_000424732.1;transl_table=11
NZ_JJLS01000113.1	RefSeq	gene	2343	3401	.	+	.	ID=gene-AC56_RS20435;Name=AC56_RS20435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20435;old_locus_tag=AC56_0305
NZ_JJLS01000113.1	Protein Homology	CDS	2343	3401	.	+	0	ID=cds-WP_000785324.1;Parent=gene-AC56_RS20435;Dbxref=GenBank:WP_000785324.1;Name=WP_000785324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536648.1;locus_tag=AC56_RS20435;product=baseplate J/gp47 family protein;protein_id=WP_000785324.1;transl_table=11
NZ_JJLS01000113.1	RefSeq	gene	3392	3976	.	+	.	ID=gene-AC56_RS20430;Name=AC56_RS20430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20430;old_locus_tag=AC56_0306
NZ_JJLS01000113.1	Protein Homology	CDS	3392	3976	.	+	0	ID=cds-WP_032277883.1;Parent=gene-AC56_RS20430;Dbxref=GenBank:WP_032277883.1;Name=WP_032277883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415671.1;locus_tag=AC56_RS20430;product=YmfQ family protein;protein_id=WP_032277883.1;transl_table=11
NZ_JJLS01000113.1	RefSeq	pseudogene	3980	4276	.	+	.	ID=gene-AC56_RS20425;Name=stfP;end_range=4276,.;gbkey=Gene;gene=stfP;gene_biotype=pseudogene;locus_tag=AC56_RS20425;old_locus_tag=AC56_0307;partial=true;pseudo=true
NZ_JJLS01000113.1	Protein Homology	CDS	3980	4276	.	+	0	ID=cds-AC56_RS20425;Parent=gene-AC56_RS20425;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4276,.;gbkey=CDS;gene=stfP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415672.1;locus_tag=AC56_RS20425;partial=true;product=protein StfP;pseudo=true;transl_table=11
NZ_JJLS01000113.1	RefSeq	gene	4372	5454	.	+	.	ID=gene-AC56_RS20420;Name=AC56_RS20420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20420;old_locus_tag=AC56_0308
NZ_JJLS01000113.1	Protein Homology	CDS	4372	5454	.	+	0	ID=cds-WP_032277884.1;Parent=gene-AC56_RS20420;Dbxref=GenBank:WP_032277884.1;Name=WP_032277884.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: protein motif:HMM:NF013257.6;locus_tag=AC56_RS20420;product=glycosyltransferase family 9 protein;protein_id=WP_032277884.1;transl_table=11
NZ_JJLS01000113.1	RefSeq	gene	5465	5860	.	-	.	ID=gene-AC56_RS20415;Name=AC56_RS20415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20415;old_locus_tag=AC56_0309
NZ_JJLS01000113.1	Protein Homology	CDS	5465	5860	.	-	0	ID=cds-WP_032277885.1;Parent=gene-AC56_RS20415;Dbxref=GenBank:WP_032277885.1;Name=WP_032277885.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014467.6;locus_tag=AC56_RS20415;product=tail fiber assembly protein;protein_id=WP_032277885.1;transl_table=11
NZ_JJLS01000113.1	RefSeq	gene	5861	6541	.	-	.	ID=gene-AC56_RS20410;Name=AC56_RS20410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20410;old_locus_tag=AC56_0310
NZ_JJLS01000113.1	GeneMarkS-2+	CDS	5861	6541	.	-	0	ID=cds-WP_162752765.1;Parent=gene-AC56_RS20410;Dbxref=GenBank:WP_162752765.1;Name=WP_162752765.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS20410;product=glycine-rich domain-containing protein;protein_id=WP_162752765.1;transl_table=11
NZ_JJLS01000113.1	RefSeq	gene	6568	7122	.	+	.	ID=gene-AC56_RS0125210;Name=AC56_RS0125210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0125210
NZ_JJLS01000113.1	Protein Homology	CDS	6568	7122	.	+	0	ID=cds-WP_032277894.1;Parent=gene-AC56_RS0125210;Dbxref=GenBank:WP_032277894.1;Name=WP_032277894.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308311.1;locus_tag=AC56_RS0125210;product=recombinase family protein;protein_id=WP_032277894.1;transl_table=11
NZ_JJLS01000113.1	RefSeq	pseudogene	7329	7457	.	+	.	ID=gene-AC56_RS32630;Name=AC56_RS32630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS32630;partial=true;pseudo=true;start_range=.,7329
NZ_JJLS01000113.1	Protein Homology	CDS	7329	7457	.	+	0	ID=cds-AC56_RS32630;Parent=gene-AC56_RS32630;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308365.3;locus_tag=AC56_RS32630;partial=true;product=aldo/keto reductase;pseudo=true;start_range=.,7329;transl_table=11
NZ_JJLS01000113.1	RefSeq	gene	7616	8209	.	-	.	ID=gene-AC56_RS20405;Name=rclC;gbkey=Gene;gene=rclC;gene_biotype=protein_coding;locus_tag=AC56_RS20405;old_locus_tag=AC56_0312
NZ_JJLS01000113.1	Protein Homology	CDS	7616	8209	.	-	0	ID=cds-WP_032277887.1;Parent=gene-AC56_RS20405;Dbxref=GenBank:WP_032277887.1;Name=WP_032277887.1;gbkey=CDS;gene=rclC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414835.2;locus_tag=AC56_RS20405;product=reactive chlorine species resistance protein RclC;protein_id=WP_032277887.1;transl_table=11
NZ_JJLS01000113.1	RefSeq	gene	8221	8457	.	-	.	ID=gene-AC56_RS20400;Name=rclB;gbkey=Gene;gene=rclB;gene_biotype=protein_coding;locus_tag=AC56_RS20400;old_locus_tag=AC56_0313
NZ_JJLS01000113.1	Protein Homology	CDS	8221	8457	.	-	0	ID=cds-WP_032277888.1;Parent=gene-AC56_RS20400;Dbxref=GenBank:WP_032277888.1;Name=WP_032277888.1;gbkey=CDS;gene=rclB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414837.2;locus_tag=AC56_RS20400;product=reactive chlorine resistance periplasmic protein RclB;protein_id=WP_032277888.1;transl_table=11
NZ_JJLS01000113.1	RefSeq	gene	8566	9891	.	-	.	ID=gene-AC56_RS20395;Name=rclA;gbkey=Gene;gene=rclA;gene_biotype=protein_coding;locus_tag=AC56_RS20395;old_locus_tag=AC56_0314
NZ_JJLS01000113.1	Protein Homology	CDS	8566	9891	.	-	0	ID=cds-WP_001046295.1;Parent=gene-AC56_RS20395;Dbxref=GenBank:WP_001046295.1;Name=WP_001046295.1;gbkey=CDS;gene=rclA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414838.2;locus_tag=AC56_RS20395;product=reactive chlorine resistance oxidoreductase RclA;protein_id=WP_001046295.1;transl_table=11
NZ_JJLS01000113.1	RefSeq	gene	10117	10971	.	+	.	ID=gene-AC56_RS20390;Name=rclR;gbkey=Gene;gene=rclR;gene_biotype=protein_coding;locus_tag=AC56_RS20390;old_locus_tag=AC56_0315
NZ_JJLS01000113.1	Protein Homology	CDS	10117	10971	.	+	0	ID=cds-WP_000339586.1;Parent=gene-AC56_RS20390;Dbxref=GenBank:WP_000339586.1;Name=WP_000339586.1;gbkey=CDS;gene=rclR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308370.1;locus_tag=AC56_RS20390;product=reactive chlorine-specific transcriptional regulator RclR;protein_id=WP_000339586.1;transl_table=11
NZ_JJLS01000113.1	RefSeq	gene	11499	12218	.	+	.	ID=gene-AC56_RS20385;Name=ykgE;gbkey=Gene;gene=ykgE;gene_biotype=protein_coding;locus_tag=AC56_RS20385;old_locus_tag=AC56_0316
NZ_JJLS01000113.1	Protein Homology	CDS	11499	12218	.	+	0	ID=cds-WP_001398687.1;Parent=gene-AC56_RS20385;Dbxref=GenBank:WP_001398687.1;Name=WP_001398687.1;Ontology_term=GO:0016491,GO:0046872,GO:0051536;gbkey=CDS;gene=ykgE;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308371.1;locus_tag=AC56_RS20385;product=(Fe-S)-binding protein;protein_id=WP_001398687.1;transl_table=11
NZ_JJLS01000113.1	RefSeq	gene	12229	13656	.	+	.	ID=gene-AC56_RS20380;Name=ykgF;gbkey=Gene;gene=ykgF;gene_biotype=protein_coding;locus_tag=AC56_RS20380;old_locus_tag=AC56_0317
NZ_JJLS01000113.1	Protein Homology	CDS	12229	13656	.	+	0	ID=cds-WP_000023919.1;Parent=gene-AC56_RS20380;Dbxref=GenBank:WP_000023919.1;Name=WP_000023919.1;Ontology_term=GO:0006089,GO:0051536;gbkey=CDS;gene=ykgF;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706212.1;locus_tag=AC56_RS20380;product=LutB/LldF family L-lactate oxidation iron-sulfur protein;protein_id=WP_000023919.1;transl_table=11
NZ_JJLS01000113.1	RefSeq	gene	13649	14344	.	+	.	ID=gene-AC56_RS20375;Name=ykgG;gbkey=Gene;gene=ykgG;gene_biotype=protein_coding;locus_tag=AC56_RS20375;old_locus_tag=AC56_0318
NZ_JJLS01000113.1	Protein Homology	CDS	13649	14344	.	+	0	ID=cds-WP_016246916.1;Parent=gene-AC56_RS20375;Dbxref=GenBank:WP_016246916.1;Name=WP_016246916.1;Ontology_term=GO:0006089;gbkey=CDS;gene=ykgG;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414842.4;locus_tag=AC56_RS20375;product=LutC/YkgG family protein;protein_id=WP_016246916.1;transl_table=11
NZ_JJLS01000113.1	RefSeq	gene	14587	15204	.	-	.	ID=gene-AC56_RS20365;Name=AC56_RS20365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20365;old_locus_tag=AC56_0320
NZ_JJLS01000113.1	Protein Homology	CDS	14587	15204	.	-	0	ID=cds-WP_241162784.1;Parent=gene-AC56_RS20365;Dbxref=GenBank:WP_241162784.1;Name=WP_241162784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414844.1;locus_tag=AC56_RS20365;product=hypothetical protein;protein_id=WP_241162784.1;transl_table=11
NZ_JJLS01000113.1	RefSeq	gene	15468	17138	.	-	.	ID=gene-AC56_RS20360;Name=betA;gbkey=Gene;gene=betA;gene_biotype=protein_coding;locus_tag=AC56_RS20360;old_locus_tag=AC56_0321
NZ_JJLS01000113.1	Protein Homology	CDS	15468	17138	.	-	0	ID=cds-WP_001159094.1;Parent=gene-AC56_RS20360;Dbxref=GenBank:WP_001159094.1;Name=WP_001159094.1;Ontology_term=GO:0019285,GO:0008812;gbkey=CDS;gene=betA;go_function=choline dehydrogenase activity|0008812||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414845.1;locus_tag=AC56_RS20360;product=choline dehydrogenase;protein_id=WP_001159094.1;transl_table=11
NZ_JJLS01000113.1	RefSeq	gene	17152	18624	.	-	.	ID=gene-AC56_RS20355;Name=betB;gbkey=Gene;gene=betB;gene_biotype=protein_coding;locus_tag=AC56_RS20355;old_locus_tag=AC56_0322
NZ_JJLS01000113.1	Protein Homology	CDS	17152	18624	.	-	0	ID=cds-WP_000089110.1;Parent=gene-AC56_RS20355;Dbxref=GenBank:WP_000089110.1;Name=WP_000089110.1;Ontology_term=GO:0019285,GO:0008802,GO:0046872;gbkey=CDS;gene=betB;go_function=betaine-aldehyde dehydrogenase (NAD+) activity|0008802||IEA,metal ion binding|0046872||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414846.1;locus_tag=AC56_RS20355;product=betaine-aldehyde dehydrogenase;protein_id=WP_000089110.1;transl_table=11
NZ_JJLS01000113.1	RefSeq	gene	18638	19225	.	-	.	ID=gene-AC56_RS20350;Name=betI;gbkey=Gene;gene=betI;gene_biotype=protein_coding;locus_tag=AC56_RS20350;old_locus_tag=AC56_0323
NZ_JJLS01000113.1	Protein Homology	CDS	18638	19225	.	-	0	ID=cds-WP_001335745.1;Parent=gene-AC56_RS20350;Dbxref=GenBank:WP_001335745.1;Name=WP_001335745.1;Ontology_term=GO:0003677;gbkey=CDS;gene=betI;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414847.3;locus_tag=AC56_RS20350;product=transcriptional regulator BetI;protein_id=WP_001335745.1;transl_table=11
NZ_JJLS01000113.1	RefSeq	gene	19354	21387	.	+	.	ID=gene-AC56_RS20345;Name=betT;gbkey=Gene;gene=betT;gene_biotype=protein_coding;locus_tag=AC56_RS20345;old_locus_tag=AC56_0324
NZ_JJLS01000113.1	Protein Homology	CDS	19354	21387	.	+	0	ID=cds-WP_000131044.1;Parent=gene-AC56_RS20345;Dbxref=GenBank:WP_000131044.1;Name=WP_000131044.1;gbkey=CDS;gene=betT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308387.1;locus_tag=AC56_RS20345;product=choline BCCT transporter BetT;protein_id=WP_000131044.1;transl_table=11
NZ_JJLS01000113.1	RefSeq	gene	21693	21764	.	+	.	ID=gene-AC56_RS32635;Name=AC56_RS32635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS32635
NZ_JJLS01000113.1	Protein Homology	CDS	21693	21764	.	+	0	ID=cds-WP_135565409.1;Parent=gene-AC56_RS32635;Dbxref=GenBank:WP_135565409.1;Name=WP_135565409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518747.1;locus_tag=AC56_RS32635;product=hypothetical protein;protein_id=WP_135565409.1;transl_table=11
NZ_JJLS01000113.1	RefSeq	pseudogene	22262	23125	.	+	.	ID=gene-AC56_RS20340;Name=pdeL;end_range=23125,.;gbkey=Gene;gene=pdeL;gene_biotype=pseudogene;locus_tag=AC56_RS20340;old_locus_tag=AC56_0325;partial=true;pseudo=true
NZ_JJLS01000113.1	Protein Homology	CDS	22262	23125	.	+	0	ID=cds-AC56_RS20340;Parent=gene-AC56_RS20340;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=23125,.;gbkey=CDS;gene=pdeL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414849.1;locus_tag=AC56_RS20340;partial=true;product=DNA-binding transcriptional activator/c-di-GMP phosphodiesterase PdeL;pseudo=true;transl_table=11
NZ_JJLS01000113.1	RefSeq	gene	23159	23609	.	+	.	ID=gene-AC56_RS20335;Name=AC56_RS20335;end_range=23609,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20335;old_locus_tag=AC56_0326;partial=true
NZ_JJLS01000113.1	Protein Homology	CDS	23159	23609	.	+	0	ID=cds-WP_032282547.1;Parent=gene-AC56_RS20335;Dbxref=GenBank:WP_032282547.1;Name=WP_032282547.1;Ontology_term=GO:0004803;end_range=23609,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS20335;partial=true;product=IS5 family transposase;protein_id=WP_032282547.1;transl_table=11
##sequence-region NZ_JJLS01000114.1 1 36367
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000114.1	RefSeq	region	1	36367	.	+	.	ID=NZ_JJLS01000114.1:1..36367;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000114.1	RefSeq	pseudogene	1	409	.	+	.	ID=gene-AC56_RS20330;Name=AC56_RS20330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS20330;old_locus_tag=AC56_0327;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000114.1	Protein Homology	CDS	1	409	.	+	1	ID=cds-AC56_RS20330;Parent=gene-AC56_RS20330;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS20330;partial=true;product=IS5-like element IS903B family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000114.1	RefSeq	gene	455	1078	.	-	.	ID=gene-AC56_RS20325;Name=yahN;gbkey=Gene;gene=yahN;gene_biotype=protein_coding;locus_tag=AC56_RS20325;old_locus_tag=AC56_0328
NZ_JJLS01000114.1	Protein Homology	CDS	455	1078	.	-	0	ID=cds-WP_077746173.1;Parent=gene-AC56_RS20325;Dbxref=GenBank:WP_077746173.1;Name=WP_077746173.1;gbkey=CDS;gene=yahN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414862.1;locus_tag=AC56_RS20325;product=LysE family transporter;protein_id=WP_077746173.1;transl_table=11
NZ_JJLS01000114.1	RefSeq	gene	1225	1500	.	+	.	ID=gene-AC56_RS20320;Name=yahO;gbkey=Gene;gene=yahO;gene_biotype=protein_coding;locus_tag=AC56_RS20320;old_locus_tag=AC56_0329
NZ_JJLS01000114.1	Protein Homology	CDS	1225	1500	.	+	0	ID=cds-WP_000691956.1;Parent=gene-AC56_RS20320;Dbxref=GenBank:WP_000691956.1;Name=WP_000691956.1;gbkey=CDS;gene=yahO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414863.1;locus_tag=AC56_RS20320;product=DUF1471 family periplasmic protein YahO;protein_id=WP_000691956.1;transl_table=11
NZ_JJLS01000114.1	RefSeq	gene	1598	3184	.	-	.	ID=gene-AC56_RS20315;Name=prpR;gbkey=Gene;gene=prpR;gene_biotype=protein_coding;locus_tag=AC56_RS20315;old_locus_tag=AC56_0331
NZ_JJLS01000114.1	Protein Homology	CDS	1598	3184	.	-	0	ID=cds-WP_000941026.1;Parent=gene-AC56_RS20315;Dbxref=GenBank:WP_000941026.1;Name=WP_000941026.1;gbkey=CDS;gene=prpR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308411.1;locus_tag=AC56_RS20315;product=propionate catabolism operon regulatory protein PrpR;protein_id=WP_000941026.1;transl_table=11
NZ_JJLS01000114.1	RefSeq	gene	3423	4313	.	+	.	ID=gene-AC56_RS20310;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=AC56_RS20310;old_locus_tag=AC56_0332
NZ_JJLS01000114.1	Protein Homology	CDS	3423	4313	.	+	0	ID=cds-WP_000052206.1;Parent=gene-AC56_RS20310;Dbxref=GenBank:WP_000052206.1;Name=WP_000052206.1;Ontology_term=GO:0019629,GO:0046421;gbkey=CDS;gene=prpB;go_function=methylisocitrate lyase activity|0046421||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414865.1;locus_tag=AC56_RS20310;product=methylisocitrate lyase;protein_id=WP_000052206.1;transl_table=11
NZ_JJLS01000114.1	RefSeq	gene	4939	6108	.	+	.	ID=gene-AC56_RS20305;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=AC56_RS20305;old_locus_tag=AC56_0333
NZ_JJLS01000114.1	Protein Homology	CDS	4939	6108	.	+	0	ID=cds-WP_001285927.1;Parent=gene-AC56_RS20305;Dbxref=GenBank:WP_001285927.1;Name=WP_001285927.1;Ontology_term=GO:0019679,GO:0004108,GO:0050440;gbkey=CDS;gene=prpC;go_function=citrate (Si)-synthase activity|0004108||IEA,2-methylcitrate synthase activity|0050440||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414867.1;locus_tag=AC56_RS20305;product=bifunctional 2-methylcitrate synthase/citrate synthase;protein_id=WP_001285927.1;transl_table=11
NZ_JJLS01000114.1	RefSeq	gene	6142	7593	.	+	.	ID=gene-AC56_RS20300;Name=prpD;gbkey=Gene;gene=prpD;gene_biotype=protein_coding;locus_tag=AC56_RS20300;old_locus_tag=AC56_0334
NZ_JJLS01000114.1	Protein Homology	CDS	6142	7593	.	+	0	ID=cds-WP_032277902.1;Parent=gene-AC56_RS20300;Dbxref=GenBank:WP_032277902.1;Name=WP_032277902.1;Ontology_term=GO:0019679,GO:0047547,GO:0051537;gbkey=CDS;gene=prpD;go_function=2-methylcitrate dehydratase activity|0047547||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414868.1;locus_tag=AC56_RS20300;product=2-methylcitrate dehydratase;protein_id=WP_032277902.1;transl_table=11
NZ_JJLS01000114.1	RefSeq	gene	7633	9519	.	+	.	ID=gene-AC56_RS20295;Name=prpE;gbkey=Gene;gene=prpE;gene_biotype=protein_coding;locus_tag=AC56_RS20295;old_locus_tag=AC56_0335
NZ_JJLS01000114.1	Protein Homology	CDS	7633	9519	.	+	0	ID=cds-WP_032277903.1;Parent=gene-AC56_RS20295;Dbxref=GenBank:WP_032277903.1;Name=WP_032277903.1;Ontology_term=GO:0019629,GO:0050218;gbkey=CDS;gene=prpE;go_function=propionate-CoA ligase activity|0050218||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414869.1;locus_tag=AC56_RS20295;product=propionate--CoA ligase;protein_id=WP_032277903.1;transl_table=11
NZ_JJLS01000114.1	RefSeq	gene	9943	11202	.	+	.	ID=gene-AC56_RS20290;Name=codB;gbkey=Gene;gene=codB;gene_biotype=protein_coding;locus_tag=AC56_RS20290;old_locus_tag=AC56_0337
NZ_JJLS01000114.1	Protein Homology	CDS	9943	11202	.	+	0	ID=cds-WP_000076233.1;Parent=gene-AC56_RS20290;Dbxref=GenBank:WP_000076233.1;Name=WP_000076233.1;Ontology_term=GO:0055085,GO:0015209,GO:0016020;gbkey=CDS;gene=codB;go_component=membrane|0016020||IEA;go_function=cytosine transmembrane transporter activity|0015209||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414870.1;locus_tag=AC56_RS20290;product=cytosine permease;protein_id=WP_000076233.1;transl_table=11
NZ_JJLS01000114.1	RefSeq	gene	11192	12475	.	+	.	ID=gene-AC56_RS20285;Name=codA;gbkey=Gene;gene=codA;gene_biotype=protein_coding;locus_tag=AC56_RS20285;old_locus_tag=AC56_0338
NZ_JJLS01000114.1	Protein Homology	CDS	11192	12475	.	+	0	ID=cds-WP_001301240.1;Parent=gene-AC56_RS20285;Dbxref=GenBank:WP_001301240.1;Name=WP_001301240.1;gbkey=CDS;gene=codA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414871.1;locus_tag=AC56_RS20285;product=cytosine/isoguanine deaminase;protein_id=WP_001301240.1;transl_table=11
NZ_JJLS01000114.1	RefSeq	gene	13012	13911	.	-	.	ID=gene-AC56_RS20280;Name=cynR;gbkey=Gene;gene=cynR;gene_biotype=protein_coding;locus_tag=AC56_RS20280;old_locus_tag=AC56_0339
NZ_JJLS01000114.1	Protein Homology	CDS	13012	13911	.	-	0	ID=cds-WP_000952503.1-2;Parent=gene-AC56_RS20280;Dbxref=GenBank:WP_000952503.1;Name=WP_000952503.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cynR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414872.3;locus_tag=AC56_RS20280;product=transcriptional regulator CynR;protein_id=WP_000952503.1;transl_table=11
NZ_JJLS01000114.1	RefSeq	gene	14020	14679	.	+	.	ID=gene-AC56_RS20275;Name=cynT;gbkey=Gene;gene=cynT;gene_biotype=protein_coding;locus_tag=AC56_RS20275;old_locus_tag=AC56_0340
NZ_JJLS01000114.1	Protein Homology	CDS	14020	14679	.	+	0	ID=cds-WP_032277904.1;Parent=gene-AC56_RS20275;Dbxref=GenBank:WP_032277904.1;Name=WP_032277904.1;gbkey=CDS;gene=cynT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414873.1;locus_tag=AC56_RS20275;product=carbonic anhydrase CynT;protein_id=WP_032277904.1;transl_table=11
NZ_JJLS01000114.1	RefSeq	gene	14710	15180	.	+	.	ID=gene-AC56_RS20270;Name=cynS;gbkey=Gene;gene=cynS;gene_biotype=protein_coding;locus_tag=AC56_RS20270;old_locus_tag=AC56_0341
NZ_JJLS01000114.1	Protein Homology	CDS	14710	15180	.	+	0	ID=cds-WP_000616243.1;Parent=gene-AC56_RS20270;Dbxref=GenBank:WP_000616243.1;Name=WP_000616243.1;Ontology_term=GO:0009439,GO:0008824;gbkey=CDS;gene=cynS;go_function=cyanate hydratase activity|0008824||IEA;go_process=cyanate metabolic process|0009439||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414874.1;locus_tag=AC56_RS20270;product=cyanase;protein_id=WP_000616243.1;transl_table=11
NZ_JJLS01000114.1	RefSeq	pseudogene	15213	16366	.	+	.	ID=gene-AC56_RS0125220;Name=cynX;gbkey=Gene;gene=cynX;gene_biotype=pseudogene;locus_tag=AC56_RS0125220;old_locus_tag=AC56_0342;pseudo=true
NZ_JJLS01000114.1	Protein Homology	CDS	15213	16366	.	+	0	ID=cds-AC56_RS0125220;Parent=gene-AC56_RS0125220;Note=frameshifted;gbkey=CDS;gene=cynX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414875.1;locus_tag=AC56_RS0125220;product=cyanate transporter CynX;pseudo=true;transl_table=11
NZ_JJLS01000114.1	RefSeq	gene	16469	17080	.	-	.	ID=gene-AC56_RS20265;Name=lacA;gbkey=Gene;gene=lacA;gene_biotype=protein_coding;locus_tag=AC56_RS20265;old_locus_tag=AC56_0344
NZ_JJLS01000114.1	Protein Homology	CDS	16469	17080	.	-	0	ID=cds-WP_001335915.1;Parent=gene-AC56_RS20265;Dbxref=GenBank:WP_001335915.1;Name=WP_001335915.1;gbkey=CDS;gene=lacA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414876.1;locus_tag=AC56_RS20265;product=galactoside O-acetyltransferase;protein_id=WP_001335915.1;transl_table=11
NZ_JJLS01000114.1	RefSeq	gene	17146	18399	.	-	.	ID=gene-AC56_RS20260;Name=lacY;gbkey=Gene;gene=lacY;gene_biotype=protein_coding;locus_tag=AC56_RS20260;old_locus_tag=AC56_0345
NZ_JJLS01000114.1	Protein Homology	CDS	17146	18399	.	-	0	ID=cds-WP_000291549.1;Parent=gene-AC56_RS20260;Dbxref=GenBank:WP_000291549.1;Name=WP_000291549.1;gbkey=CDS;gene=lacY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414877.1;locus_tag=AC56_RS20260;product=lactose permease;protein_id=WP_000291549.1;transl_table=11
NZ_JJLS01000114.1	RefSeq	gene	18451	21525	.	-	.	ID=gene-AC56_RS20255;Name=lacZ;gbkey=Gene;gene=lacZ;gene_biotype=protein_coding;locus_tag=AC56_RS20255;old_locus_tag=AC56_0346
NZ_JJLS01000114.1	Protein Homology	CDS	18451	21525	.	-	0	ID=cds-WP_032277905.1;Parent=gene-AC56_RS20255;Dbxref=GenBank:WP_032277905.1;Name=WP_032277905.1;gbkey=CDS;gene=lacZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414878.1;locus_tag=AC56_RS20255;product=beta-galactosidase;protein_id=WP_032277905.1;transl_table=11
NZ_JJLS01000114.1	RefSeq	gene	21648	22730	.	-	.	ID=gene-AC56_RS20250;Name=lacI;gbkey=Gene;gene=lacI;gene_biotype=protein_coding;locus_tag=AC56_RS20250;old_locus_tag=AC56_0347
NZ_JJLS01000114.1	Protein Homology	CDS	21648	22730	.	-	0	ID=cds-WP_000805885.1;Parent=gene-AC56_RS20250;Dbxref=GenBank:WP_000805885.1;Name=WP_000805885.1;gbkey=CDS;gene=lacI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414879.3;locus_tag=AC56_RS20250;product=DNA-binding transcriptional repressor LacI;protein_id=WP_000805885.1;transl_table=11
NZ_JJLS01000114.1	RefSeq	gene	22807	23640	.	-	.	ID=gene-AC56_RS20245;Name=mhpR;gbkey=Gene;gene=mhpR;gene_biotype=protein_coding;locus_tag=AC56_RS20245;old_locus_tag=AC56_0348
NZ_JJLS01000114.1	Protein Homology	CDS	22807	23640	.	-	0	ID=cds-WP_001306931.1;Parent=gene-AC56_RS20245;Dbxref=GenBank:WP_001306931.1;Name=WP_001306931.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=mhpR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414880.2;locus_tag=AC56_RS20245;product=DNA-binding transcriptional regulator;protein_id=WP_001306931.1;transl_table=11
NZ_JJLS01000114.1	RefSeq	gene	23831	25495	.	+	.	ID=gene-AC56_RS20240;Name=mhpA;gbkey=Gene;gene=mhpA;gene_biotype=protein_coding;locus_tag=AC56_RS20240;old_locus_tag=AC56_0349
NZ_JJLS01000114.1	Protein Homology	CDS	23831	25495	.	+	0	ID=cds-WP_032277906.1;Parent=gene-AC56_RS20240;Dbxref=GenBank:WP_032277906.1;Name=WP_032277906.1;Ontology_term=GO:0019622,GO:0008688;gbkey=CDS;gene=mhpA;go_function=3-(3-hydroxyphenyl)propionate hydroxylase activity|0008688||IEA;go_process=3-(3-hydroxy)phenylpropionate catabolic process|0019622||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308429.1;locus_tag=AC56_RS20240;product=bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;protein_id=WP_032277906.1;transl_table=11
NZ_JJLS01000114.1	RefSeq	gene	25497	26441	.	+	.	ID=gene-AC56_RS20235;Name=mhpB;gbkey=Gene;gene=mhpB;gene_biotype=protein_coding;locus_tag=AC56_RS20235;old_locus_tag=AC56_0350
NZ_JJLS01000114.1	Protein Homology	CDS	25497	26441	.	+	0	ID=cds-WP_032282548.1;Parent=gene-AC56_RS20235;Dbxref=GenBank:WP_032282548.1;Name=WP_032282548.1;gbkey=CDS;gene=mhpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308430.1;locus_tag=AC56_RS20235;product=2%2C3-dihydroxyphenylpropionate/2%2C3-dihydroxicinnamic acid 1%2C2-dioxygenase;protein_id=WP_032282548.1;transl_table=11
NZ_JJLS01000114.1	RefSeq	gene	26459	27325	.	+	.	ID=gene-AC56_RS20230;Name=mhpC;gbkey=Gene;gene=mhpC;gene_biotype=protein_coding;locus_tag=AC56_RS20230;old_locus_tag=AC56_0351
NZ_JJLS01000114.1	Protein Homology	CDS	26459	27325	.	+	0	ID=cds-WP_000121898.1;Parent=gene-AC56_RS20230;Dbxref=GenBank:WP_000121898.1;Name=WP_000121898.1;gbkey=CDS;gene=mhpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414883.5;locus_tag=AC56_RS20230;product=2-hydroxy-6-oxonona-2%2C4-dienedioate hydrolase;protein_id=WP_000121898.1;transl_table=11
NZ_JJLS01000114.1	RefSeq	gene	27335	28144	.	+	.	ID=gene-AC56_RS20225;Name=mhpD;gbkey=Gene;gene=mhpD;gene_biotype=protein_coding;locus_tag=AC56_RS20225;old_locus_tag=AC56_0352
NZ_JJLS01000114.1	Protein Homology	CDS	27335	28144	.	+	0	ID=cds-WP_032176975.1;Parent=gene-AC56_RS20225;Dbxref=GenBank:WP_032176975.1;Name=WP_032176975.1;gbkey=CDS;gene=mhpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414884.2;locus_tag=AC56_RS20225;product=2-keto-4-pentenoate hydratase;protein_id=WP_032176975.1;transl_table=11
NZ_JJLS01000114.1	RefSeq	gene	28141	29091	.	+	.	ID=gene-AC56_RS20220;Name=mhpF;gbkey=Gene;gene=mhpF;gene_biotype=protein_coding;locus_tag=AC56_RS20220;old_locus_tag=AC56_0353
NZ_JJLS01000114.1	Protein Homology	CDS	28141	29091	.	+	0	ID=cds-WP_000044314.1;Parent=gene-AC56_RS20220;Dbxref=GenBank:WP_000044314.1;Name=WP_000044314.1;gbkey=CDS;gene=mhpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414885.1;locus_tag=AC56_RS20220;product=acetaldehyde dehydrogenase;protein_id=WP_000044314.1;transl_table=11
NZ_JJLS01000114.1	RefSeq	gene	29088	30101	.	+	.	ID=gene-AC56_RS20215;Name=mhpE;gbkey=Gene;gene=mhpE;gene_biotype=protein_coding;locus_tag=AC56_RS20215;old_locus_tag=AC56_0354
NZ_JJLS01000114.1	Protein Homology	CDS	29088	30101	.	+	0	ID=cds-WP_001013499.1;Parent=gene-AC56_RS20215;Dbxref=GenBank:WP_001013499.1;Name=WP_001013499.1;gbkey=CDS;gene=mhpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414886.1;locus_tag=AC56_RS20215;product=4-hydroxy-2-oxovalerate aldolase;protein_id=WP_001013499.1;transl_table=11
NZ_JJLS01000114.1	RefSeq	gene	30376	31587	.	+	.	ID=gene-AC56_RS20210;Name=mhpT;gbkey=Gene;gene=mhpT;gene_biotype=protein_coding;locus_tag=AC56_RS20210;old_locus_tag=AC56_0355
NZ_JJLS01000114.1	Protein Homology	CDS	30376	31587	.	+	0	ID=cds-WP_032277908.1;Parent=gene-AC56_RS20210;Dbxref=GenBank:WP_032277908.1;Name=WP_032277908.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mhpT;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308435.2;locus_tag=AC56_RS20210;product=3-(3-hydroxy-phenyl)propionate transporter MhpT;protein_id=WP_032277908.1;transl_table=11
NZ_JJLS01000114.1	RefSeq	gene	31689	32228	.	+	.	ID=gene-AC56_RS20205;Name=yaiL;gbkey=Gene;gene=yaiL;gene_biotype=protein_coding;locus_tag=AC56_RS20205;old_locus_tag=AC56_0356
NZ_JJLS01000114.1	Protein Homology	CDS	31689	32228	.	+	0	ID=cds-WP_001096707.1;Parent=gene-AC56_RS20205;Dbxref=GenBank:WP_001096707.1;Name=WP_001096707.1;gbkey=CDS;gene=yaiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414888.4;locus_tag=AC56_RS20205;product=DUF2058 domain-containing protein;protein_id=WP_001096707.1;transl_table=11
NZ_JJLS01000114.1	RefSeq	gene	32354	33187	.	-	.	ID=gene-AC56_RS20200;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=AC56_RS20200;old_locus_tag=AC56_0357
NZ_JJLS01000114.1	Protein Homology	CDS	32354	33187	.	-	0	ID=cds-WP_032277909.1;Parent=gene-AC56_RS20200;Dbxref=GenBank:WP_032277909.1;Name=WP_032277909.1;Ontology_term=GO:0046294,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde catabolic process|0046294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414889.1;locus_tag=AC56_RS20200;product=S-formylglutathione hydrolase;protein_id=WP_032277909.1;transl_table=11
NZ_JJLS01000114.1	RefSeq	gene	33279	34388	.	-	.	ID=gene-AC56_RS20195;Name=frmA;gbkey=Gene;gene=frmA;gene_biotype=protein_coding;locus_tag=AC56_RS20195;old_locus_tag=AC56_0358
NZ_JJLS01000114.1	Protein Homology	CDS	33279	34388	.	-	0	ID=cds-WP_000842100.1;Parent=gene-AC56_RS20195;Dbxref=GenBank:WP_000842100.1;Name=WP_000842100.1;gbkey=CDS;gene=frmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308438.1;locus_tag=AC56_RS20195;product=S-(hydroxymethyl)glutathione dehydrogenase;protein_id=WP_000842100.1;transl_table=11
NZ_JJLS01000114.1	RefSeq	gene	34423	34698	.	-	.	ID=gene-AC56_RS20190;Name=frmR;gbkey=Gene;gene=frmR;gene_biotype=protein_coding;locus_tag=AC56_RS20190;old_locus_tag=AC56_0359
NZ_JJLS01000114.1	Protein Homology	CDS	34423	34698	.	-	0	ID=cds-WP_001141271.1;Parent=gene-AC56_RS20190;Dbxref=GenBank:WP_001141271.1;Name=WP_001141271.1;gbkey=CDS;gene=frmR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414891.4;locus_tag=AC56_RS20190;product=formaldehyde-responsive transcriptional repressor FrmR;protein_id=WP_001141271.1;transl_table=11
NZ_JJLS01000114.1	RefSeq	gene	34886	35659	.	-	.	ID=gene-AC56_RS20185;Name=yaiO;gbkey=Gene;gene=yaiO;gene_biotype=protein_coding;locus_tag=AC56_RS20185;old_locus_tag=AC56_0360
NZ_JJLS01000114.1	Protein Homology	CDS	34886	35659	.	-	0	ID=cds-WP_032277910.1;Parent=gene-AC56_RS20185;Dbxref=GenBank:WP_032277910.1;Name=WP_032277910.1;gbkey=CDS;gene=yaiO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414892.1;locus_tag=AC56_RS20185;product=YaiO family outer membrane beta-barrel protein;protein_id=WP_032277910.1;transl_table=11
NZ_JJLS01000114.1	RefSeq	pseudogene	35661	36074	.	-	.	ID=gene-AC56_RS20180;Name=AC56_RS20180;end_range=36074,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS20180;old_locus_tag=AC56_0361;partial=true;pseudo=true
NZ_JJLS01000114.1	Protein Homology	CDS	35661	36074	.	-	0	ID=cds-AC56_RS20180;Parent=gene-AC56_RS20180;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=36074,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020231914.1;locus_tag=AC56_RS20180;partial=true;product=acetyltransferase;pseudo=true;transl_table=11
NZ_JJLS01000114.1	RefSeq	gene	36131	36367	.	+	.	ID=gene-AC56_RS0125225;Name=AC56_RS0125225;end_range=36367,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0125225;old_locus_tag=AC56_0362;partial=true
NZ_JJLS01000114.1	Protein Homology	CDS	36131	36367	.	+	0	ID=cds-WP_000179207.1;Parent=gene-AC56_RS0125225;Dbxref=GenBank:WP_000179207.1;Name=WP_000179207.1;end_range=36367,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS0125225;partial=true;product=IS1-like element transposase;protein_id=WP_000179207.1;transl_table=11
##sequence-region NZ_JJLS01000115.1 1 7709
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000115.1	RefSeq	region	1	7709	.	+	.	ID=NZ_JJLS01000115.1:1..7709;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000115.1	RefSeq	pseudogene	167	457	.	-	.	ID=gene-AC56_RS20170;Name=AC56_RS20170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS20170;old_locus_tag=AC56_0364;partial=true;pseudo=true;start_range=.,167
NZ_JJLS01000115.1	Protein Homology	CDS	167	457	.	-	0	ID=cds-AC56_RS20170;Parent=gene-AC56_RS20170;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0008410;gbkey=CDS;go_function=CoA-transferase activity|0008410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310428.1;locus_tag=AC56_RS20170;partial=true;product=CoA-transferase;pseudo=true;start_range=.,167;transl_table=11
NZ_JJLS01000115.1	RefSeq	gene	600	1358	.	-	.	ID=gene-AC56_RS20165;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=AC56_RS20165;old_locus_tag=AC56_0366
NZ_JJLS01000115.1	Protein Homology	CDS	600	1358	.	-	0	ID=cds-WP_016242173.1;Parent=gene-AC56_RS20165;Dbxref=GenBank:WP_016242173.1;Name=WP_016242173.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416208.1;locus_tag=AC56_RS20165;product=type I 3-dehydroquinate dehydratase;protein_id=WP_016242173.1;transl_table=11
NZ_JJLS01000115.1	RefSeq	gene	1389	2255	.	-	.	ID=gene-AC56_RS20160;Name=ydiB;gbkey=Gene;gene=ydiB;gene_biotype=protein_coding;locus_tag=AC56_RS20160;old_locus_tag=AC56_0367
NZ_JJLS01000115.1	Protein Homology	CDS	1389	2255	.	-	0	ID=cds-WP_032278339.1;Parent=gene-AC56_RS20160;Dbxref=GenBank:WP_032278339.1;Name=WP_032278339.1;gbkey=CDS;gene=ydiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416207.1;locus_tag=AC56_RS20160;product=quinate/shikimate dehydrogenase;protein_id=WP_032278339.1;transl_table=11
NZ_JJLS01000115.1	RefSeq	gene	2267	3532	.	-	.	ID=gene-AC56_RS20155;Name=AC56_RS20155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20155;old_locus_tag=AC56_0368
NZ_JJLS01000115.1	Protein Homology	CDS	2267	3532	.	-	0	ID=cds-WP_001297389.1;Parent=gene-AC56_RS20155;Dbxref=GenBank:WP_001297389.1;Name=WP_001297389.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310425.2;locus_tag=AC56_RS20155;product=MFS transporter;protein_id=WP_001297389.1;transl_table=11
NZ_JJLS01000115.1	RefSeq	pseudogene	3759	4310	.	-	.	ID=gene-AC56_RS20150;Name=AC56_RS20150;end_range=4310,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS20150;old_locus_tag=AC56_0369;partial=true;pseudo=true
NZ_JJLS01000115.1	Protein Homology	CDS	3759	4310	.	-	0	ID=cds-AC56_RS20150;Parent=gene-AC56_RS20150;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857;end_range=4310,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416205.1;locus_tag=AC56_RS20150;partial=true;product=MFS transporter;pseudo=true;transl_table=11
NZ_JJLS01000115.1	RefSeq	gene	4366	5063	.	+	.	ID=gene-AC56_RS20145;Name=AC56_RS20145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20145;old_locus_tag=AC56_0370
NZ_JJLS01000115.1	Protein Homology	CDS	4366	4615	.	+	0	ID=cds-WP_236165453.1;Parent=gene-AC56_RS20145;Dbxref=GenBank:WP_236165453.1;Name=WP_236165453.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558270.1;locus_tag=AC56_RS20145;product=IS1 family transposase;protein_id=WP_236165453.1;transl_table=11
NZ_JJLS01000115.1	Protein Homology	CDS	4615	5063	.	+	2	ID=cds-WP_236165453.1;Parent=gene-AC56_RS20145;Dbxref=GenBank:WP_236165453.1;Name=WP_236165453.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558270.1;locus_tag=AC56_RS20145;product=IS1 family transposase;protein_id=WP_236165453.1;transl_table=11
NZ_JJLS01000115.1	RefSeq	pseudogene	5080	5343	.	-	.	ID=gene-AC56_RS28750;Name=AC56_RS28750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS28750;partial=true;pseudo=true;start_range=.,5080
NZ_JJLS01000115.1	Protein Homology	CDS	5080	5343	.	-	0	ID=cds-AC56_RS28750;Parent=gene-AC56_RS28750;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001704011.1;locus_tag=AC56_RS28750;partial=true;product=acetyltransferase;pseudo=true;start_range=.,5080;transl_table=11
NZ_JJLS01000115.1	RefSeq	gene	5231	6427	.	-	.	ID=gene-AC56_RS20140;Name=yaiP;gbkey=Gene;gene=yaiP;gene_biotype=protein_coding;locus_tag=AC56_RS20140;old_locus_tag=AC56_0372
NZ_JJLS01000115.1	Protein Homology	CDS	5231	6427	.	-	0	ID=cds-WP_000860439.1;Parent=gene-AC56_RS20140;Dbxref=GenBank:WP_000860439.1;Name=WP_000860439.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;gene=yaiP;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414897.1;locus_tag=AC56_RS20140;product=glycosyltransferase;protein_id=WP_000860439.1;transl_table=11
NZ_JJLS01000115.1	RefSeq	gene	6452	6571	.	+	.	ID=gene-AC56_RS33900;Name=AC56_RS33900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33900
NZ_JJLS01000115.1	Protein Homology	CDS	6452	6571	.	+	0	ID=cds-WP_123059036.1;Parent=gene-AC56_RS33900;Dbxref=GenBank:WP_123059036.1;Name=WP_123059036.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048625.1;locus_tag=AC56_RS33900;product=hypothetical protein;protein_id=WP_123059036.1;transl_table=11
NZ_JJLS01000115.1	RefSeq	pseudogene	6698	7108	.	-	.	ID=gene-AC56_RS33905;Name=AC56_RS33905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33905;partial=true;pseudo=true;start_range=.,6698
NZ_JJLS01000115.1	Protein Homology	CDS	6698	7108	.	-	0	ID=cds-AC56_RS33905;Parent=gene-AC56_RS33905;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0019213;gbkey=CDS;go_function=deacetylase activity|0019213||IEA;inference=COORDINATES: protein motif:HMM:NF014625.6;locus_tag=AC56_RS33905;partial=true;product=PIG-L deacetylase family protein;pseudo=true;start_range=.,6698;transl_table=11
NZ_JJLS01000115.1	RefSeq	gene	7355	7709	.	+	.	ID=gene-AC56_RS20130;Name=AC56_RS20130;end_range=7709,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20130;old_locus_tag=AC56_0374;partial=true
NZ_JJLS01000115.1	Protein Homology	CDS	7355	7709	.	+	0	ID=cds-WP_009307866.1;Parent=gene-AC56_RS20130;Dbxref=GenBank:WP_009307866.1;Name=WP_009307866.1;end_range=7709,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS20130;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_009307866.1;transl_table=11
##sequence-region NZ_JJLS01000116.1 1 9733
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000116.1	RefSeq	region	1	9733	.	+	.	ID=NZ_JJLS01000116.1:1..9733;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000116.1	RefSeq	gene	1	351	.	+	.	ID=gene-AC56_RS0125230;Name=AC56_RS0125230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0125230;old_locus_tag=AC56_0375;partial=true;start_range=.,1
NZ_JJLS01000116.1	Protein Homology	CDS	1	351	.	+	0	ID=cds-WP_032282552.1;Parent=gene-AC56_RS0125230;Dbxref=GenBank:WP_032282552.1;Name=WP_032282552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS0125230;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032282552.1;start_range=.,1;transl_table=11
NZ_JJLS01000116.1	RefSeq	gene	333	527	.	+	.	ID=gene-AC56_RS33685;Name=AC56_RS33685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33685
NZ_JJLS01000116.1	Protein Homology	CDS	333	527	.	+	0	ID=cds-WP_349237782.1;Parent=gene-AC56_RS33685;Dbxref=GenBank:WP_349237782.1;Name=WP_349237782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001340454.1;locus_tag=AC56_RS33685;product=hypothetical protein;protein_id=WP_349237782.1;transl_table=11
NZ_JJLS01000116.1	RefSeq	gene	940	1902	.	+	.	ID=gene-AC56_RS20125;Name=tauA;gbkey=Gene;gene=tauA;gene_biotype=protein_coding;locus_tag=AC56_RS20125;old_locus_tag=AC56_0378
NZ_JJLS01000116.1	Protein Homology	CDS	940	1902	.	+	0	ID=cds-WP_032277915.1;Parent=gene-AC56_RS20125;Dbxref=GenBank:WP_032277915.1;Name=WP_032277915.1;Ontology_term=GO:0055085,GO:0015411,GO:0042597,GO:0043190;gbkey=CDS;gene=tauA;go_component=periplasmic space|0042597||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type taurine transporter transporter activity|0015411||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414899.2;locus_tag=AC56_RS20125;product=taurine ABC transporter substrate-binding protein;protein_id=WP_032277915.1;transl_table=11
NZ_JJLS01000116.1	RefSeq	gene	1915	2682	.	+	.	ID=gene-AC56_RS20120;Name=tauB;gbkey=Gene;gene=tauB;gene_biotype=protein_coding;locus_tag=AC56_RS20120;old_locus_tag=AC56_0379
NZ_JJLS01000116.1	Protein Homology	CDS	1915	2682	.	+	0	ID=cds-WP_000939399.1;Parent=gene-AC56_RS20120;Dbxref=GenBank:WP_000939399.1;Name=WP_000939399.1;Ontology_term=GO:0005524,GO:0015411,GO:0016020;gbkey=CDS;gene=tauB;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type taurine transporter transporter activity|0015411||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308447.1;locus_tag=AC56_RS20120;product=taurine ABC transporter ATP-binding subunit;protein_id=WP_000939399.1;transl_table=11
NZ_JJLS01000116.1	RefSeq	gene	2679	3506	.	+	.	ID=gene-AC56_RS20115;Name=tauC;gbkey=Gene;gene=tauC;gene_biotype=protein_coding;locus_tag=AC56_RS20115;old_locus_tag=AC56_0380
NZ_JJLS01000116.1	Protein Homology	CDS	2679	3506	.	+	0	ID=cds-WP_000114586.1;Parent=gene-AC56_RS20115;Dbxref=GenBank:WP_000114586.1;Name=WP_000114586.1;Ontology_term=GO:0055085,GO:0015411,GO:0016020;gbkey=CDS;gene=tauC;go_component=membrane|0016020||IEA;go_function=ABC-type taurine transporter transporter activity|0015411||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308448.1;locus_tag=AC56_RS20115;product=taurine ABC transporter permease TauC;protein_id=WP_000114586.1;transl_table=11
NZ_JJLS01000116.1	RefSeq	gene	3503	4354	.	+	.	ID=gene-AC56_RS20110;Name=tauD;gbkey=Gene;gene=tauD;gene_biotype=protein_coding;locus_tag=AC56_RS20110;old_locus_tag=AC56_0381
NZ_JJLS01000116.1	Protein Homology	CDS	3503	4354	.	+	0	ID=cds-WP_000004027.1;Parent=gene-AC56_RS20110;Dbxref=GenBank:WP_000004027.1;Name=WP_000004027.1;Ontology_term=GO:0016491;gbkey=CDS;gene=tauD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414902.1;locus_tag=AC56_RS20110;product=taurine dioxygenase;protein_id=WP_000004027.1;transl_table=11
NZ_JJLS01000116.1	RefSeq	gene	4512	5486	.	-	.	ID=gene-AC56_RS20105;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=AC56_RS20105;old_locus_tag=AC56_0382
NZ_JJLS01000116.1	Protein Homology	CDS	4512	5486	.	-	0	ID=cds-WP_001300813.1;Parent=gene-AC56_RS20105;Dbxref=GenBank:WP_001300813.1;Name=WP_001300813.1;Ontology_term=GO:0033014,GO:0004655;gbkey=CDS;gene=hemB;go_function=porphobilinogen synthase activity|0004655||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308450.2;locus_tag=AC56_RS20105;product=porphobilinogen synthase;protein_id=WP_001300813.1;transl_table=11
NZ_JJLS01000116.1	RefSeq	gene	6009	8987	.	+	.	ID=gene-AC56_RS20100;Name=ehaB;gbkey=Gene;gene=ehaB;gene_biotype=protein_coding;locus_tag=AC56_RS20100;old_locus_tag=AC56_0383
NZ_JJLS01000116.1	Protein Homology	CDS	6009	8987	.	+	0	ID=cds-WP_000556485.1;Parent=gene-AC56_RS20100;Dbxref=GenBank:WP_000556485.1;Name=WP_000556485.1;gbkey=CDS;gene=ehaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308451.1;locus_tag=AC56_RS20100;product=autotransporter adhesin EhaB;protein_id=WP_000556485.1;transl_table=11
NZ_JJLS01000116.1	RefSeq	pseudogene	9075	9170	.	+	.	ID=gene-AC56_RS31935;Name=AC56_RS31935;end_range=9170,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS31935;old_locus_tag=AC56_0384;partial=true;pseudo=true
NZ_JJLS01000116.1	Protein Homology	CDS	9075	9170	.	+	0	ID=cds-AC56_RS31935;Parent=gene-AC56_RS31935;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=9170,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414909.2;locus_tag=AC56_RS31935;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_JJLS01000116.1	RefSeq	pseudogene	9187	9733	.	-	.	ID=gene-AC56_RS20095;Name=AC56_RS20095;end_range=9733,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS20095;old_locus_tag=AC56_0385;partial=true;pseudo=true
NZ_JJLS01000116.1	Protein Homology	CDS	9187	9733	.	-	2	ID=cds-AC56_RS20095;Parent=gene-AC56_RS20095;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0004803;end_range=9733,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS20095;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000117.1 1 51981
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000117.1	RefSeq	region	1	51981	.	+	.	ID=NZ_JJLS01000117.1:1..51981;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000117.1	RefSeq	pseudogene	1	332	.	-	.	ID=gene-AC56_RS0125240;Name=AC56_RS0125240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0125240;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000117.1	Protein Homology	CDS	1	332	.	-	0	ID=cds-AC56_RS0125240;Parent=gene-AC56_RS0125240;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS0125240;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000117.1	RefSeq	pseudogene	381	923	.	+	.	ID=gene-AC56_RS0125245;Name=iprA;gbkey=Gene;gene=iprA;gene_biotype=pseudogene;locus_tag=AC56_RS0125245;old_locus_tag=AC56_0387;partial=true;pseudo=true;start_range=.,381
NZ_JJLS01000117.1	Protein Homology	CDS	381	923	.	+	0	ID=cds-AC56_RS0125245;Parent=gene-AC56_RS0125245;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=iprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414909.2;locus_tag=AC56_RS0125245;partial=true;product=hydrogen peroxide resistance inhibitor IprA;pseudo=true;start_range=.,381;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	924	2081	.	-	.	ID=gene-AC56_RS20090;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=protein_coding;locus_tag=AC56_RS20090;old_locus_tag=AC56_0388
NZ_JJLS01000117.1	Protein Homology	CDS	924	2081	.	-	0	ID=cds-WP_032277917.1;Parent=gene-AC56_RS20090;Dbxref=GenBank:WP_032277917.1;Name=WP_032277917.1;gbkey=CDS;gene=ampH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308453.1;locus_tag=AC56_RS20090;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;protein_id=WP_032277917.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	2433	3653	.	+	.	ID=gene-AC56_RS20080;Name=sbmA;gbkey=Gene;gene=sbmA;gene_biotype=protein_coding;locus_tag=AC56_RS20080;old_locus_tag=AC56_0390
NZ_JJLS01000117.1	Protein Homology	CDS	2433	3653	.	+	0	ID=cds-WP_001297134.1;Parent=gene-AC56_RS20080;Dbxref=GenBank:WP_001297134.1;Name=WP_001297134.1;Ontology_term=GO:0015833,GO:1904680;gbkey=CDS;gene=sbmA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706191.2;locus_tag=AC56_RS20080;product=peptide antibiotic transporter SbmA;protein_id=WP_001297134.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	3666	4760	.	+	.	ID=gene-AC56_RS20075;Name=yaiW;gbkey=Gene;gene=yaiW;gene_biotype=protein_coding;locus_tag=AC56_RS20075;old_locus_tag=AC56_0391
NZ_JJLS01000117.1	Protein Homology	CDS	3666	4760	.	+	0	ID=cds-WP_032277918.1;Parent=gene-AC56_RS20075;Dbxref=GenBank:WP_032277918.1;Name=WP_032277918.1;gbkey=CDS;gene=yaiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706190.1;locus_tag=AC56_RS20075;product=surface-exposed outer membrane lipoprotein YaiW;protein_id=WP_032277918.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	4819	5127	.	-	.	ID=gene-AC56_RS20070;Name=yaiY;gbkey=Gene;gene=yaiY;gene_biotype=protein_coding;locus_tag=AC56_RS20070;old_locus_tag=AC56_0392
NZ_JJLS01000117.1	Protein Homology	CDS	4819	5127	.	-	0	ID=cds-WP_000763151.1;Parent=gene-AC56_RS20070;Dbxref=GenBank:WP_000763151.1;Name=WP_000763151.1;gbkey=CDS;gene=yaiY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308456.1;locus_tag=AC56_RS20070;product=YaiY family protein;protein_id=WP_000763151.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	5387	5599	.	+	.	ID=gene-AC56_RS31950;Name=yaiZ;gbkey=Gene;gene=yaiZ;gene_biotype=protein_coding;locus_tag=AC56_RS31950;old_locus_tag=AC56_0393
NZ_JJLS01000117.1	Protein Homology	CDS	5387	5599	.	+	0	ID=cds-WP_001295334.1;Parent=gene-AC56_RS31950;Dbxref=GenBank:WP_001295334.1;Name=WP_001295334.1;gbkey=CDS;gene=yaiZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414914.2;locus_tag=AC56_RS31950;product=DUF2754 domain-containing protein;protein_id=WP_001295334.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	5623	6717	.	-	.	ID=gene-AC56_RS20060;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=AC56_RS20060;old_locus_tag=AC56_0394
NZ_JJLS01000117.1	Protein Homology	CDS	5623	6717	.	-	0	ID=cds-WP_000413677.1;Parent=gene-AC56_RS20060;Dbxref=GenBank:WP_000413677.1;Name=WP_000413677.1;Ontology_term=GO:0008716;gbkey=CDS;gene=ddlA;go_function=D-alanine-D-alanine ligase activity|0008716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308458.1;locus_tag=AC56_RS20060;product=D-alanine--D-alanine ligase;protein_id=WP_000413677.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	6795	6998	.	+	.	ID=gene-AC56_RS20055;Name=AC56_RS20055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS20055;old_locus_tag=AC56_0395
NZ_JJLS01000117.1	Protein Homology	CDS	6795	6998	.	+	0	ID=cds-WP_001300163.1;Parent=gene-AC56_RS20055;Dbxref=GenBank:WP_001300163.1;Name=WP_001300163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439229.1;locus_tag=AC56_RS20055;product=hypothetical protein;protein_id=WP_001300163.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	7180	7440	.	+	.	ID=gene-AC56_RS20050;Name=iraP;gbkey=Gene;gene=iraP;gene_biotype=protein_coding;locus_tag=AC56_RS20050;old_locus_tag=AC56_0396
NZ_JJLS01000117.1	Protein Homology	CDS	7180	7440	.	+	0	ID=cds-WP_000792970.1;Parent=gene-AC56_RS20050;Dbxref=GenBank:WP_000792970.1;Name=WP_000792970.1;gbkey=CDS;gene=iraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308459.1;locus_tag=AC56_RS20050;product=anti-adapter protein IraP;protein_id=WP_000792970.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	7541	8956	.	+	.	ID=gene-AC56_RS20045;Name=phoA;gbkey=Gene;gene=phoA;gene_biotype=protein_coding;locus_tag=AC56_RS20045;old_locus_tag=AC56_0397
NZ_JJLS01000117.1	Protein Homology	CDS	7541	8956	.	+	0	ID=cds-WP_032277919.1;Parent=gene-AC56_RS20045;Dbxref=GenBank:WP_032277919.1;Name=WP_032277919.1;Ontology_term=GO:0016791;gbkey=CDS;gene=phoA;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414917.2;locus_tag=AC56_RS20045;product=alkaline phosphatase;protein_id=WP_032277919.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	9075	9395	.	+	.	ID=gene-AC56_RS20040;Name=psiF;gbkey=Gene;gene=psiF;gene_biotype=protein_coding;locus_tag=AC56_RS20040;old_locus_tag=AC56_0398
NZ_JJLS01000117.1	Protein Homology	CDS	9075	9395	.	+	0	ID=cds-WP_001295332.1;Parent=gene-AC56_RS20040;Dbxref=GenBank:WP_001295332.1;Name=WP_001295332.1;gbkey=CDS;gene=psiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414918.4;locus_tag=AC56_RS20040;product=phosphate starvation-inducible protein PsiF;protein_id=WP_001295332.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	9497	10612	.	+	.	ID=gene-AC56_RS20035;Name=adrA;gbkey=Gene;gene=adrA;gene_biotype=protein_coding;gene_synonym=dgcC;locus_tag=AC56_RS20035;old_locus_tag=AC56_0399
NZ_JJLS01000117.1	Protein Homology	CDS	9497	10612	.	+	0	ID=cds-WP_000484048.1;Parent=gene-AC56_RS20035;Dbxref=GenBank:WP_000484048.1;Name=WP_000484048.1;gbkey=CDS;gene=adrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414919.1;locus_tag=AC56_RS20035;product=diguanylate cyclase AdrA;protein_id=WP_000484048.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	10629	11438	.	-	.	ID=gene-AC56_RS20030;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=AC56_RS20030;old_locus_tag=AC56_0400
NZ_JJLS01000117.1	Protein Homology	CDS	10629	11438	.	-	0	ID=cds-WP_001295331.1;Parent=gene-AC56_RS20030;Dbxref=GenBank:WP_001295331.1;Name=WP_001295331.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414920.1;locus_tag=AC56_RS20030;product=pyrroline-5-carboxylate reductase;protein_id=WP_001295331.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	11558	12016	.	+	.	ID=gene-AC56_RS20025;Name=yaiI;gbkey=Gene;gene=yaiI;gene_biotype=protein_coding;locus_tag=AC56_RS20025;old_locus_tag=AC56_0401
NZ_JJLS01000117.1	Protein Homology	CDS	11558	12016	.	+	0	ID=cds-WP_000158159.1;Parent=gene-AC56_RS20025;Dbxref=GenBank:WP_000158159.1;Name=WP_000158159.1;gbkey=CDS;gene=yaiI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414921.2;locus_tag=AC56_RS20025;product=YaiI/YqxD family protein;protein_id=WP_000158159.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	12199	12723	.	+	.	ID=gene-AC56_RS20020;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=AC56_RS20020;old_locus_tag=AC56_0402
NZ_JJLS01000117.1	Protein Homology	CDS	12199	12723	.	+	0	ID=cds-WP_000193393.1;Parent=gene-AC56_RS20020;Dbxref=GenBank:WP_000193393.1;Name=WP_000193393.1;Ontology_term=GO:0009073,GO:0004765;gbkey=CDS;gene=aroL;go_function=shikimate kinase activity|0004765||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308465.1;locus_tag=AC56_RS20020;product=shikimate kinase AroL;protein_id=WP_000193393.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	12773	12964	.	+	.	ID=gene-AC56_RS20015;Name=yaiA;gbkey=Gene;gene=yaiA;gene_biotype=protein_coding;locus_tag=AC56_RS20015;old_locus_tag=AC56_0403
NZ_JJLS01000117.1	Protein Homology	CDS	12773	12964	.	+	0	ID=cds-WP_016241936.1;Parent=gene-AC56_RS20015;Dbxref=GenBank:WP_016241936.1;Name=WP_016241936.1;gbkey=CDS;gene=yaiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308466.1;locus_tag=AC56_RS20015;product=protein YaiA;protein_id=WP_016241936.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	13222	13899	.	+	.	ID=gene-AC56_RS20010;Name=aroM;gbkey=Gene;gene=aroM;gene_biotype=protein_coding;locus_tag=AC56_RS20010;old_locus_tag=AC56_0404
NZ_JJLS01000117.1	Protein Homology	CDS	13222	13899	.	+	0	ID=cds-WP_001276420.1;Parent=gene-AC56_RS20010;Dbxref=GenBank:WP_001276420.1;Name=WP_001276420.1;gbkey=CDS;gene=aroM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414924.1;locus_tag=AC56_RS20010;product=AroM family protein;protein_id=WP_001276420.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	13971	14255	.	+	.	ID=gene-AC56_RS20005;Name=ppnP;gbkey=Gene;gene=ppnP;gene_biotype=protein_coding;locus_tag=AC56_RS20005;old_locus_tag=AC56_0405
NZ_JJLS01000117.1	Protein Homology	CDS	13971	14255	.	+	0	ID=cds-WP_001396715.1;Parent=gene-AC56_RS20005;Dbxref=GenBank:WP_001396715.1;Name=WP_001396715.1;gbkey=CDS;gene=ppnP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308468.1;locus_tag=AC56_RS20005;product=pyrimidine/purine nucleoside phosphorylase;protein_id=WP_001396715.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	pseudogene	14403	14744	.	+	.	ID=gene-AC56_RS20000;Name=AC56_RS20000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS20000;old_locus_tag=AC56_0406;partial=true;pseudo=true;start_range=.,14403
NZ_JJLS01000117.1	Protein Homology	CDS	14403	14744	.	+	0	ID=cds-AC56_RS20000;Parent=gene-AC56_RS20000;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308469.2;locus_tag=AC56_RS20000;partial=true;product=DUF2773 domain-containing protein;pseudo=true;start_range=.,14403;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	14741	14824	.	+	.	ID=gene-AC56_RS32645;Name=AC56_RS32645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS32645
NZ_JJLS01000117.1	Protein Homology	CDS	14741	14824	.	+	0	ID=cds-WP_120795376.1;Parent=gene-AC56_RS32645;Dbxref=GenBank:WP_120795376.1;Name=WP_120795376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518750.1;locus_tag=AC56_RS32645;product=protein YkiD;protein_id=WP_120795376.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	14902	15813	.	-	.	ID=gene-AC56_RS19995;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=AC56_RS19995;old_locus_tag=AC56_0407
NZ_JJLS01000117.1	Protein Homology	CDS	14902	15813	.	-	0	ID=cds-WP_001298537.1;Parent=gene-AC56_RS19995;Dbxref=GenBank:WP_001298537.1;Name=WP_001298537.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120935.1;locus_tag=AC56_RS19995;product=recombination-associated protein RdgC;protein_id=WP_001298537.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	15938	16846	.	+	.	ID=gene-AC56_RS19990;Name=mak;gbkey=Gene;gene=mak;gene_biotype=protein_coding;locus_tag=AC56_RS19990;old_locus_tag=AC56_0408
NZ_JJLS01000117.1	Protein Homology	CDS	15938	16846	.	+	0	ID=cds-WP_001219312.1;Parent=gene-AC56_RS19990;Dbxref=GenBank:WP_001219312.1;Name=WP_001219312.1;gbkey=CDS;gene=mak;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414928.2;locus_tag=AC56_RS19990;product=fructokinase;protein_id=WP_001219312.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	17093	18277	.	-	.	ID=gene-AC56_RS19985;Name=araJ;gbkey=Gene;gene=araJ;gene_biotype=protein_coding;locus_tag=AC56_RS19985;old_locus_tag=AC56_0410
NZ_JJLS01000117.1	Protein Homology	CDS	17093	18277	.	-	0	ID=cds-WP_001306939.1;Parent=gene-AC56_RS19985;Dbxref=GenBank:WP_001306939.1;Name=WP_001306939.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=araJ;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414930.3;locus_tag=AC56_RS19985;product=MFS transporter AraJ;protein_id=WP_001306939.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	18403	21549	.	-	.	ID=gene-AC56_RS19980;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=AC56_RS19980;old_locus_tag=AC56_0411
NZ_JJLS01000117.1	Protein Homology	CDS	18403	21549	.	-	0	ID=cds-WP_000698909.1;Parent=gene-AC56_RS19980;Dbxref=GenBank:WP_000698909.1;Name=WP_000698909.1;Ontology_term=GO:0006260,GO:0004527;gbkey=CDS;gene=sbcC;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414931.1;locus_tag=AC56_RS19980;product=exonuclease subunit SbcC;protein_id=WP_000698909.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	21546	22748	.	-	.	ID=gene-AC56_RS19975;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=AC56_RS19975;old_locus_tag=AC56_0412
NZ_JJLS01000117.1	Protein Homology	CDS	21546	22748	.	-	0	ID=cds-WP_032277920.1;Parent=gene-AC56_RS19975;Dbxref=GenBank:WP_032277920.1;Name=WP_032277920.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcD;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308475.1;locus_tag=AC56_RS19975;product=exonuclease subunit SbcD;protein_id=WP_032277920.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	22938	23627	.	+	.	ID=gene-AC56_RS19970;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=AC56_RS19970;old_locus_tag=AC56_0413
NZ_JJLS01000117.1	Protein Homology	CDS	22938	23627	.	+	0	ID=cds-WP_000113933.1;Parent=gene-AC56_RS19970;Dbxref=GenBank:WP_000113933.1;Name=WP_000113933.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=AC56_RS19970;product=phosphate response regulator transcription factor PhoB;protein_id=WP_000113933.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	23685	24980	.	+	.	ID=gene-AC56_RS19965;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=AC56_RS19965;old_locus_tag=AC56_0414
NZ_JJLS01000117.1	Protein Homology	CDS	23685	24980	.	+	0	ID=cds-WP_001674066.1;Parent=gene-AC56_RS19965;Dbxref=GenBank:WP_001674066.1;Name=WP_001674066.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0004721,GO:0016020;gbkey=CDS;gene=phoR;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphoprotein phosphatase activity|0004721||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414934.1;locus_tag=AC56_RS19965;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_001674066.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	25387	26706	.	+	.	ID=gene-AC56_RS19960;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=AC56_RS19960;old_locus_tag=AC56_0416
NZ_JJLS01000117.1	Protein Homology	CDS	25387	26706	.	+	0	ID=cds-WP_000149639.1;Parent=gene-AC56_RS19960;Dbxref=GenBank:WP_000149639.1;Name=WP_000149639.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308478.1;locus_tag=AC56_RS19960;product=branched-chain amino acid transporter carrier protein BrnQ;protein_id=WP_000149639.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	26782	28155	.	+	.	ID=gene-AC56_RS19955;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=AC56_RS19955;old_locus_tag=AC56_0417
NZ_JJLS01000117.1	Protein Homology	CDS	26782	28155	.	+	0	ID=cds-WP_001295329.1;Parent=gene-AC56_RS19955;Dbxref=GenBank:WP_001295329.1;Name=WP_001295329.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=proY;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308479.1;locus_tag=AC56_RS19955;product=proline-specific permease ProY;protein_id=WP_001295329.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	28311	30128	.	+	.	ID=gene-AC56_RS19950;Name=malZ;gbkey=Gene;gene=malZ;gene_biotype=protein_coding;locus_tag=AC56_RS19950;old_locus_tag=AC56_0418
NZ_JJLS01000117.1	Protein Homology	CDS	28311	30128	.	+	0	ID=cds-WP_001300528.1;Parent=gene-AC56_RS19950;Dbxref=GenBank:WP_001300528.1;Name=WP_001300528.1;Ontology_term=GO:0005975,GO:0004558;gbkey=CDS;gene=malZ;go_function=alpha-1%2C4-glucosidase activity|0004558||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706291.1;locus_tag=AC56_RS19950;product=maltodextrin glucosidase;protein_id=WP_001300528.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	30133	30714	.	-	.	ID=gene-AC56_RS19945;Name=acpH;gbkey=Gene;gene=acpH;gene_biotype=protein_coding;locus_tag=AC56_RS19945;old_locus_tag=AC56_0419
NZ_JJLS01000117.1	Protein Homology	CDS	30133	30714	.	-	0	ID=cds-WP_001009885.1;Parent=gene-AC56_RS19945;Dbxref=GenBank:WP_001009885.1;Name=WP_001009885.1;Ontology_term=GO:0006633,GO:0008770;gbkey=CDS;gene=acpH;go_function=[acyl-carrier-protein] phosphodiesterase activity|0008770||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414938.1;locus_tag=AC56_RS19945;product=ACP phosphodiesterase;protein_id=WP_001009885.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	30807	31877	.	+	.	ID=gene-AC56_RS19940;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=AC56_RS19940;old_locus_tag=AC56_0420
NZ_JJLS01000117.1	Protein Homology	CDS	30807	31877	.	+	0	ID=cds-WP_001266503.1;Parent=gene-AC56_RS19940;Dbxref=GenBank:WP_001266503.1;Name=WP_001266503.1;Ontology_term=GO:0006400,GO:0008616,GO:0051075,GO:0005737;gbkey=CDS;gene=queA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity|0051075||IEA;go_process=tRNA modification|0006400||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308483.1;locus_tag=AC56_RS19940;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_001266503.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	31933	33060	.	+	.	ID=gene-AC56_RS19935;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=AC56_RS19935;old_locus_tag=AC56_0421
NZ_JJLS01000117.1	Protein Homology	CDS	31933	33060	.	+	0	ID=cds-WP_000667319.1;Parent=gene-AC56_RS19935;Dbxref=GenBank:WP_000667319.1;Name=WP_000667319.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904808.1;locus_tag=AC56_RS19935;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_000667319.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	33083	33415	.	+	.	ID=gene-AC56_RS19930;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=AC56_RS19930;old_locus_tag=AC56_0422
NZ_JJLS01000117.1	Protein Homology	CDS	33083	33415	.	+	0	ID=cds-WP_000007629.1;Parent=gene-AC56_RS19930;Dbxref=GenBank:WP_000007629.1;Name=WP_000007629.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=AC56_RS19930;product=preprotein translocase subunit YajC;protein_id=WP_000007629.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	33443	35290	.	+	.	ID=gene-AC56_RS19925;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=AC56_RS19925;old_locus_tag=AC56_0423
NZ_JJLS01000117.1	Protein Homology	CDS	33443	35290	.	+	0	ID=cds-WP_000934822.1;Parent=gene-AC56_RS19925;Dbxref=GenBank:WP_000934822.1;Name=WP_000934822.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=AC56_RS19925;product=protein translocase subunit SecD;protein_id=WP_000934822.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	35301	36272	.	+	.	ID=gene-AC56_RS19920;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=AC56_RS19920;old_locus_tag=AC56_0424
NZ_JJLS01000117.1	Protein Homology	CDS	35301	36272	.	+	0	ID=cds-WP_032277921.1;Parent=gene-AC56_RS19920;Dbxref=GenBank:WP_032277921.1;Name=WP_032277921.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308487.1;locus_tag=AC56_RS19920;product=protein translocase subunit SecF;protein_id=WP_032277921.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	36401	36748	.	+	.	ID=gene-AC56_RS19915;Name=yajD;gbkey=Gene;gene=yajD;gene_biotype=protein_coding;locus_tag=AC56_RS19915;old_locus_tag=AC56_0425
NZ_JJLS01000117.1	Protein Homology	CDS	36401	36748	.	+	0	ID=cds-WP_000974813.1;Parent=gene-AC56_RS19915;Dbxref=GenBank:WP_000974813.1;Name=WP_000974813.1;gbkey=CDS;gene=yajD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308490.1;locus_tag=AC56_RS19915;product=HNH nuclease YajD;protein_id=WP_000974813.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	36925	37809	.	-	.	ID=gene-AC56_RS19910;Name=tsx;gbkey=Gene;gene=tsx;gene_biotype=protein_coding;locus_tag=AC56_RS19910;old_locus_tag=AC56_0426
NZ_JJLS01000117.1	Protein Homology	CDS	36925	37809	.	-	0	ID=cds-WP_001295328.1;Parent=gene-AC56_RS19910;Dbxref=GenBank:WP_001295328.1;Name=WP_001295328.1;gbkey=CDS;gene=tsx;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308491.1;locus_tag=AC56_RS19910;product=nucleoside-specific channel-forming protein Tsx;protein_id=WP_001295328.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	38108	38647	.	-	.	ID=gene-AC56_RS19905;Name=yajI;gbkey=Gene;gene=yajI;gene_biotype=protein_coding;locus_tag=AC56_RS19905;old_locus_tag=AC56_0427
NZ_JJLS01000117.1	Protein Homology	CDS	38108	38647	.	-	0	ID=cds-WP_001295327.1;Parent=gene-AC56_RS19905;Dbxref=GenBank:WP_001295327.1;Name=WP_001295327.1;gbkey=CDS;gene=yajI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414946.4;locus_tag=AC56_RS19905;product=DUF3251 domain-containing protein;protein_id=WP_001295327.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	38798	39247	.	+	.	ID=gene-AC56_RS19900;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=AC56_RS19900;old_locus_tag=AC56_0428
NZ_JJLS01000117.1	Protein Homology	CDS	38798	39247	.	+	0	ID=cds-WP_000543535.1;Parent=gene-AC56_RS19900;Dbxref=GenBank:WP_000543535.1;Name=WP_000543535.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=AC56_RS19900;product=transcriptional regulator NrdR;protein_id=WP_000543535.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	39251	40354	.	+	.	ID=gene-AC56_RS19895;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=AC56_RS19895;old_locus_tag=AC56_0429
NZ_JJLS01000117.1	Protein Homology	CDS	39251	40354	.	+	0	ID=cds-WP_032220403.1;Parent=gene-AC56_RS19895;Dbxref=GenBank:WP_032220403.1;Name=WP_032220403.1;Ontology_term=GO:0008270,GO:0008703,GO:0008835,GO:0050661;gbkey=CDS;gene=ribD;go_function=zinc ion binding|0008270||IEA,5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706302.1;locus_tag=AC56_RS19895;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_032220403.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	40443	40913	.	+	.	ID=gene-AC56_RS19890;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=AC56_RS19890;old_locus_tag=AC56_0430
NZ_JJLS01000117.1	Protein Homology	CDS	40443	40913	.	+	0	ID=cds-WP_001021161.1;Parent=gene-AC56_RS19890;Dbxref=GenBank:WP_001021161.1;Name=WP_001021161.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818760.1;locus_tag=AC56_RS19890;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_001021161.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	40933	41352	.	+	.	ID=gene-AC56_RS19885;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=AC56_RS19885;old_locus_tag=AC56_0431
NZ_JJLS01000117.1	Protein Homology	CDS	40933	41352	.	+	0	ID=cds-WP_000801125.1;Parent=gene-AC56_RS19885;Dbxref=GenBank:WP_000801125.1;Name=WP_000801125.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308496.1;locus_tag=AC56_RS19885;product=transcription antitermination factor NusB;protein_id=WP_000801125.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	41430	42407	.	+	.	ID=gene-AC56_RS19880;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=AC56_RS19880;old_locus_tag=AC56_0432
NZ_JJLS01000117.1	Protein Homology	CDS	41430	42407	.	+	0	ID=cds-WP_000742107.1;Parent=gene-AC56_RS19880;Dbxref=GenBank:WP_000742107.1;Name=WP_000742107.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414951.1;locus_tag=AC56_RS19880;product=thiamine-phosphate kinase;protein_id=WP_000742107.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	42385	42903	.	+	.	ID=gene-AC56_RS19875;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=AC56_RS19875;old_locus_tag=AC56_0433
NZ_JJLS01000117.1	Protein Homology	CDS	42385	42903	.	+	0	ID=cds-WP_000154044.1;Parent=gene-AC56_RS19875;Dbxref=GenBank:WP_000154044.1;Name=WP_000154044.1;Ontology_term=GO:0006629,GO:0008962;gbkey=CDS;gene=pgpA;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414952.1;locus_tag=AC56_RS19875;product=phosphatidylglycerophosphatase A;protein_id=WP_000154044.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	42957	43931	.	-	.	ID=gene-AC56_RS19870;Name=yajO;gbkey=Gene;gene=yajO;gene_biotype=protein_coding;locus_tag=AC56_RS19870;old_locus_tag=AC56_0434
NZ_JJLS01000117.1	Protein Homology	CDS	42957	43931	.	-	0	ID=cds-WP_001199800.1;Parent=gene-AC56_RS19870;Dbxref=GenBank:WP_001199800.1;Name=WP_001199800.1;gbkey=CDS;gene=yajO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414953.2;locus_tag=AC56_RS19870;product=1-deoxyxylulose-5-phosphate synthase YajO;protein_id=WP_001199800.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	44111	45973	.	-	.	ID=gene-AC56_RS19865;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=AC56_RS19865;old_locus_tag=AC56_0435
NZ_JJLS01000117.1	Protein Homology	CDS	44111	45973	.	-	0	ID=cds-WP_000006806.1;Parent=gene-AC56_RS19865;Dbxref=GenBank:WP_000006806.1;Name=WP_000006806.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308501.1;locus_tag=AC56_RS19865;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_000006806.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	45998	46897	.	-	.	ID=gene-AC56_RS19860;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=AC56_RS19860;old_locus_tag=AC56_0436
NZ_JJLS01000117.1	Protein Homology	CDS	45998	46897	.	-	0	ID=cds-WP_000347217.1;Parent=gene-AC56_RS19860;Dbxref=GenBank:WP_000347217.1;Name=WP_000347217.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414955.1;locus_tag=AC56_RS19860;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WP_000347217.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	46897	47139	.	-	.	ID=gene-AC56_RS19855;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=AC56_RS19855;old_locus_tag=AC56_0437
NZ_JJLS01000117.1	Protein Homology	CDS	46897	47139	.	-	0	ID=cds-WP_001124935.1;Parent=gene-AC56_RS19855;Dbxref=GenBank:WP_001124935.1;Name=WP_001124935.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308503.1;locus_tag=AC56_RS19855;product=exodeoxyribonuclease VII small subunit;protein_id=WP_001124935.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	47345	48793	.	+	.	ID=gene-AC56_RS19850;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=AC56_RS19850;old_locus_tag=AC56_0438
NZ_JJLS01000117.1	Protein Homology	CDS	47345	48793	.	+	0	ID=cds-WP_000668682.1;Parent=gene-AC56_RS19850;Dbxref=GenBank:WP_000668682.1;Name=WP_000668682.1;Ontology_term=GO:0006400,GO:0009228,GO:0140741;gbkey=CDS;gene=thiI;go_function=tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168857.1;locus_tag=AC56_RS19850;product=tRNA uracil 4-sulfurtransferase ThiI;protein_id=WP_000668682.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	48847	49437	.	-	.	ID=gene-AC56_RS19845;Name=yajL;gbkey=Gene;gene=yajL;gene_biotype=protein_coding;locus_tag=AC56_RS19845;old_locus_tag=AC56_0439
NZ_JJLS01000117.1	Protein Homology	CDS	48847	49437	.	-	0	ID=cds-WP_032277922.1;Parent=gene-AC56_RS19845;Dbxref=GenBank:WP_032277922.1;Name=WP_032277922.1;gbkey=CDS;gene=yajL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414958.4;locus_tag=AC56_RS19845;product=protein deglycase YajL;protein_id=WP_032277922.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	49400	50311	.	-	.	ID=gene-AC56_RS19840;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=AC56_RS19840;old_locus_tag=AC56_0440
NZ_JJLS01000117.1	Protein Homology	CDS	49400	50311	.	-	0	ID=cds-WP_000705865.1;Parent=gene-AC56_RS19840;Dbxref=GenBank:WP_000705865.1;Name=WP_000705865.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414959.1;locus_tag=AC56_RS19840;product=2-dehydropantoate 2-reductase;protein_id=WP_000705865.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	50479	50970	.	+	.	ID=gene-AC56_RS19835;Name=yajQ;gbkey=Gene;gene=yajQ;gene_biotype=protein_coding;locus_tag=AC56_RS19835;old_locus_tag=AC56_0441
NZ_JJLS01000117.1	Protein Homology	CDS	50479	50970	.	+	0	ID=cds-WP_001138904.1;Parent=gene-AC56_RS19835;Dbxref=GenBank:WP_001138904.1;Name=WP_001138904.1;gbkey=CDS;gene=yajQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414960.2;locus_tag=AC56_RS19835;product=nucleotide binding protein YajQ;protein_id=WP_001138904.1;transl_table=11
NZ_JJLS01000117.1	RefSeq	pseudogene	51030	51506	.	-	.	ID=gene-AC56_RS0125260;Name=AC56_RS0125260;end_range=51506,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0125260;partial=true;pseudo=true
NZ_JJLS01000117.1	Protein Homology	CDS	51030	51506	.	-	0	ID=cds-AC56_RS0125260;Parent=gene-AC56_RS0125260;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=51506,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706315.1;locus_tag=AC56_RS0125260;partial=true;product=tetratricopeptide repeat protein;pseudo=true;transl_table=11
NZ_JJLS01000117.1	RefSeq	gene	51539	51981	.	+	.	ID=gene-AC56_RS19830;Name=AC56_RS19830;end_range=51981,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS19830;old_locus_tag=AC56_0443;partial=true
NZ_JJLS01000117.1	Protein Homology	CDS	51539	51981	.	+	0	ID=cds-WP_032278890.1;Parent=gene-AC56_RS19830;Dbxref=GenBank:WP_032278890.1;Name=WP_032278890.1;Ontology_term=GO:0004803;end_range=51981,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS19830;partial=true;product=IS5 family transposase;protein_id=WP_032278890.1;transl_table=11
##sequence-region NZ_JJLS01000118.1 1 93199
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000118.1	RefSeq	region	1	93199	.	+	.	ID=NZ_JJLS01000118.1:1..93199;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000118.1	RefSeq	gene	1	239	.	+	.	ID=gene-AC56_RS19825;Name=AC56_RS19825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS19825;old_locus_tag=AC56_0444;partial=true;start_range=.,1
NZ_JJLS01000118.1	Protein Homology	CDS	1	239	.	+	2	ID=cds-WP_032282557.1;Parent=gene-AC56_RS19825;Dbxref=GenBank:WP_032282557.1;Name=WP_032282557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS19825;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032282557.1;start_range=.,1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	221	424	.	+	.	ID=gene-AC56_RS33690;Name=AC56_RS33690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33690
NZ_JJLS01000118.1	Protein Homology	CDS	221	424	.	+	0	ID=cds-WP_338850148.1;Parent=gene-AC56_RS33690;Dbxref=GenBank:WP_338850148.1;Name=WP_338850148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001340384.1;locus_tag=AC56_RS33690;product=hypothetical protein;protein_id=WP_338850148.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	pseudogene	386	646	.	-	.	ID=gene-AC56_RS28785;Name=AC56_RS28785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS28785;old_locus_tag=AC56_0445;partial=true;pseudo=true;start_range=.,386
NZ_JJLS01000118.1	Protein Homology	CDS	386	646	.	-	0	ID=cds-AC56_RS28785;Parent=gene-AC56_RS28785;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706315.1;locus_tag=AC56_RS28785;partial=true;product=tetratricopeptide repeat protein;pseudo=true;start_range=.,386;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	699	2852	.	-	.	ID=gene-AC56_RS19820;Name=AC56_RS19820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS19820;old_locus_tag=AC56_0446
NZ_JJLS01000118.1	Protein Homology	CDS	699	2852	.	-	0	ID=cds-WP_032169783.1;Parent=gene-AC56_RS19820;Dbxref=GenBank:WP_032169783.1;Name=WP_032169783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706316.2;locus_tag=AC56_RS19820;product=SEL1-like repeat protein;protein_id=WP_032169783.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	3034	4404	.	-	.	ID=gene-AC56_RS19815;Name=yajR;gbkey=Gene;gene=yajR;gene_biotype=protein_coding;locus_tag=AC56_RS19815;old_locus_tag=AC56_0447
NZ_JJLS01000118.1	Protein Homology	CDS	3034	4404	.	-	0	ID=cds-WP_032277937.1;Parent=gene-AC56_RS19815;Dbxref=GenBank:WP_032277937.1;Name=WP_032277937.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yajR;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001000969.1;locus_tag=AC56_RS19815;product=MFS transporter;protein_id=WP_032277937.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	4553	5443	.	-	.	ID=gene-AC56_RS19810;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=AC56_RS19810;old_locus_tag=AC56_0448
NZ_JJLS01000118.1	Protein Homology	CDS	4553	5443	.	-	0	ID=cds-WP_000971336.1;Parent=gene-AC56_RS19810;Dbxref=GenBank:WP_000971336.1;Name=WP_000971336.1;Ontology_term=GO:0048034,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308509.1;locus_tag=AC56_RS19810;product=heme o synthase;protein_id=WP_000971336.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	5455	5784	.	-	.	ID=gene-AC56_RS19805;Name=cyoD;gbkey=Gene;gene=cyoD;gene_biotype=protein_coding;locus_tag=AC56_RS19805;old_locus_tag=AC56_0449
NZ_JJLS01000118.1	Protein Homology	CDS	5455	5784	.	-	0	ID=cds-WP_000019869.1;Parent=gene-AC56_RS19805;Dbxref=GenBank:WP_000019869.1;Name=WP_000019869.1;gbkey=CDS;gene=cyoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308510.1;locus_tag=AC56_RS19805;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_000019869.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	5784	6398	.	-	.	ID=gene-AC56_RS19800;Name=cyoC;gbkey=Gene;gene=cyoC;gene_biotype=protein_coding;locus_tag=AC56_RS19800;old_locus_tag=AC56_0450
NZ_JJLS01000118.1	Protein Homology	CDS	5784	6398	.	-	0	ID=cds-WP_000179819.1;Parent=gene-AC56_RS19800;Dbxref=GenBank:WP_000179819.1;Name=WP_000179819.1;Ontology_term=GO:0022904,GO:0004129;gbkey=CDS;gene=cyoC;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414964.1;locus_tag=AC56_RS19800;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_000179819.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	6388	8379	.	-	.	ID=gene-AC56_RS19795;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=AC56_RS19795;old_locus_tag=AC56_0451
NZ_JJLS01000118.1	Protein Homology	CDS	6388	8379	.	-	0	ID=cds-WP_000467180.1;Parent=gene-AC56_RS19795;Dbxref=GenBank:WP_000467180.1;Name=WP_000467180.1;Ontology_term=GO:0004129;gbkey=CDS;gene=cyoB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444673.1;locus_tag=AC56_RS19795;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_000467180.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	8401	9348	.	-	.	ID=gene-AC56_RS19790;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=AC56_RS19790;old_locus_tag=AC56_0452
NZ_JJLS01000118.1	Protein Homology	CDS	8401	9348	.	-	0	ID=cds-WP_001239440.1;Parent=gene-AC56_RS19790;Dbxref=GenBank:WP_001239440.1;Name=WP_001239440.1;Ontology_term=GO:0022900,GO:0004129;gbkey=CDS;gene=cyoA;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414966.1;locus_tag=AC56_RS19790;product=cytochrome o ubiquinol oxidase subunit II;protein_id=WP_001239440.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	9811	11286	.	-	.	ID=gene-AC56_RS19785;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=AC56_RS19785;old_locus_tag=AC56_0453
NZ_JJLS01000118.1	Protein Homology	CDS	9811	11286	.	-	0	ID=cds-WP_000098438.1;Parent=gene-AC56_RS19785;Dbxref=GenBank:WP_000098438.1;Name=WP_000098438.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ampG;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706326.1;locus_tag=AC56_RS19785;product=muropeptide MFS transporter AmpG;protein_id=WP_000098438.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	11330	11908	.	-	.	ID=gene-AC56_RS19780;Name=yajG;gbkey=Gene;gene=yajG;gene_biotype=protein_coding;locus_tag=AC56_RS19780;old_locus_tag=AC56_0454
NZ_JJLS01000118.1	Protein Homology	CDS	11330	11908	.	-	0	ID=cds-WP_001295326.1;Parent=gene-AC56_RS19780;Dbxref=GenBank:WP_001295326.1;Name=WP_001295326.1;gbkey=CDS;gene=yajG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414968.4;locus_tag=AC56_RS19780;product=lipoprotein;protein_id=WP_001295326.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	12213	12530	.	+	.	ID=gene-AC56_RS19775;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=AC56_RS19775;old_locus_tag=AC56_0455
NZ_JJLS01000118.1	Protein Homology	CDS	12213	12530	.	+	0	ID=cds-WP_000973448.1;Parent=gene-AC56_RS19775;Dbxref=GenBank:WP_000973448.1;Name=WP_000973448.1;gbkey=CDS;gene=bolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414969.4;locus_tag=AC56_RS19775;product=transcriptional regulator BolA;protein_id=WP_000973448.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	12874	14172	.	+	.	ID=gene-AC56_RS19765;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=AC56_RS19765;old_locus_tag=AC56_0457
NZ_JJLS01000118.1	Protein Homology	CDS	12874	14172	.	+	0	ID=cds-WP_001198386.1;Parent=gene-AC56_RS19765;Dbxref=GenBank:WP_001198386.1;Name=WP_001198386.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001716227.1;locus_tag=AC56_RS19765;product=trigger factor;protein_id=WP_001198386.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	14418	15041	.	+	.	ID=gene-AC56_RS19760;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=AC56_RS19760;old_locus_tag=AC56_0458
NZ_JJLS01000118.1	Protein Homology	CDS	14418	15041	.	+	0	ID=cds-WP_000122253.1;Parent=gene-AC56_RS19760;Dbxref=GenBank:WP_000122253.1;Name=WP_000122253.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809880.1;locus_tag=AC56_RS19760;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_000122253.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	15167	16441	.	+	.	ID=gene-AC56_RS19755;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=AC56_RS19755;old_locus_tag=AC56_0459
NZ_JJLS01000118.1	Protein Homology	CDS	15167	16441	.	+	0	ID=cds-WP_000130305.1;Parent=gene-AC56_RS19755;Dbxref=GenBank:WP_000130305.1;Name=WP_000130305.1;Ontology_term=GO:0005524,GO:0051082,GO:0140662,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=AC56_RS19755;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=WP_000130305.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	16629	18983	.	+	.	ID=gene-AC56_RS19750;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=AC56_RS19750;old_locus_tag=AC56_0460
NZ_JJLS01000118.1	Protein Homology	CDS	16629	18983	.	+	0	ID=cds-WP_001295325.1;Parent=gene-AC56_RS19750;Dbxref=GenBank:WP_001295325.1;Name=WP_001295325.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469947.1;locus_tag=AC56_RS19750;product=endopeptidase La;protein_id=WP_001295325.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	19174	19464	.	+	.	ID=gene-AC56_RS19745;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=AC56_RS19745;old_locus_tag=AC56_0461
NZ_JJLS01000118.1	Protein Homology	CDS	19174	19464	.	+	0	ID=cds-WP_254892905.1;Parent=gene-AC56_RS19745;Dbxref=GenBank:WP_254892905.1;Name=WP_254892905.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013356995.1;locus_tag=AC56_RS19745;product=nucleoid-associated protein HU-beta;protein_id=WP_254892905.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	19656	21527	.	+	.	ID=gene-AC56_RS19740;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=AC56_RS19740;old_locus_tag=AC56_0462
NZ_JJLS01000118.1	Protein Homology	CDS	19656	21527	.	+	0	ID=cds-WP_032277936.1;Parent=gene-AC56_RS19740;Dbxref=GenBank:WP_032277936.1;Name=WP_032277936.1;Ontology_term=GO:0003755;gbkey=CDS;gene=ppiD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414975.1;locus_tag=AC56_RS19740;product=peptidylprolyl isomerase;protein_id=WP_032277936.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	21678	22049	.	+	.	ID=gene-AC56_RS19735;Name=ybaV;gbkey=Gene;gene=ybaV;gene_biotype=protein_coding;locus_tag=AC56_RS19735;old_locus_tag=AC56_0463
NZ_JJLS01000118.1	Protein Homology	CDS	21678	22049	.	+	0	ID=cds-WP_000680312.1;Parent=gene-AC56_RS19735;Dbxref=GenBank:WP_000680312.1;Name=WP_000680312.1;gbkey=CDS;gene=ybaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414976.1;locus_tag=AC56_RS19735;product=helix-hairpin-helix domain-containing protein;protein_id=WP_000680312.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	22143	22541	.	+	.	ID=gene-AC56_RS19730;Name=fadM;gbkey=Gene;gene=fadM;gene_biotype=protein_coding;locus_tag=AC56_RS19730;old_locus_tag=AC56_0464
NZ_JJLS01000118.1	Protein Homology	CDS	22143	22541	.	+	0	ID=cds-WP_001194534.1;Parent=gene-AC56_RS19730;Dbxref=GenBank:WP_001194534.1;Name=WP_001194534.1;gbkey=CDS;gene=fadM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414977.1;locus_tag=AC56_RS19730;product=long-chain acyl-CoA thioesterase FadM;protein_id=WP_001194534.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	22593	23288	.	-	.	ID=gene-AC56_RS19725;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=AC56_RS19725;old_locus_tag=AC56_0465
NZ_JJLS01000118.1	Protein Homology	CDS	22593	23288	.	-	0	ID=cds-WP_000817229.1;Parent=gene-AC56_RS19725;Dbxref=GenBank:WP_000817229.1;Name=WP_000817229.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706338.1;locus_tag=AC56_RS19725;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_000817229.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	23353	25053	.	-	.	ID=gene-AC56_RS19720;Name=ybaE;gbkey=Gene;gene=ybaE;gene_biotype=protein_coding;locus_tag=AC56_RS19720;old_locus_tag=AC56_0466
NZ_JJLS01000118.1	Protein Homology	CDS	23353	25053	.	-	0	ID=cds-WP_032277935.1;Parent=gene-AC56_RS19720;Dbxref=GenBank:WP_032277935.1;Name=WP_032277935.1;gbkey=CDS;gene=ybaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308526.1;locus_tag=AC56_RS19720;product=SgrR family transcriptional regulator;protein_id=WP_032277935.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	25153	25971	.	+	.	ID=gene-AC56_RS19715;Name=cof;gbkey=Gene;gene=cof;gene_biotype=protein_coding;locus_tag=AC56_RS19715;old_locus_tag=AC56_0467
NZ_JJLS01000118.1	Protein Homology	CDS	25153	25971	.	+	0	ID=cds-WP_000113027.1;Parent=gene-AC56_RS19715;Dbxref=GenBank:WP_000113027.1;Name=WP_000113027.1;Ontology_term=GO:0016818;gbkey=CDS;gene=cof;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414980.2;locus_tag=AC56_RS19715;product=HMP-PP phosphatase;protein_id=WP_000113027.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	26007	26704	.	-	.	ID=gene-AC56_RS19710;Name=AC56_RS19710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS19710;old_locus_tag=AC56_0468
NZ_JJLS01000118.1	Protein Homology	CDS	26455	26704	.	-	0	ID=cds-WP_224223467.1-2;Parent=gene-AC56_RS19710;Dbxref=GenBank:WP_224223467.1;Name=WP_224223467.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS19710;product=IS1 family transposase;protein_id=WP_224223467.1;transl_table=11
NZ_JJLS01000118.1	Protein Homology	CDS	26007	26455	.	-	2	ID=cds-WP_224223467.1-2;Parent=gene-AC56_RS19710;Dbxref=GenBank:WP_224223467.1;Name=WP_224223467.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS19710;product=IS1 family transposase;protein_id=WP_224223467.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	26901	27359	.	+	.	ID=gene-AC56_RS19705;Name=decR;gbkey=Gene;gene=decR;gene_biotype=protein_coding;locus_tag=AC56_RS19705;old_locus_tag=AC56_0470
NZ_JJLS01000118.1	Protein Homology	CDS	26901	27359	.	+	0	ID=cds-WP_000884589.1;Parent=gene-AC56_RS19705;Dbxref=GenBank:WP_000884589.1;Name=WP_000884589.1;gbkey=CDS;gene=decR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308528.2;locus_tag=AC56_RS19705;product=DNA-binding transcriptional regulator DecR;protein_id=WP_000884589.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	27389	29161	.	+	.	ID=gene-AC56_RS19700;Name=mdlA;gbkey=Gene;gene=mdlA;gene_biotype=protein_coding;locus_tag=AC56_RS19700;old_locus_tag=AC56_0471
NZ_JJLS01000118.1	Protein Homology	CDS	27389	29161	.	+	0	ID=cds-WP_001235611.1;Parent=gene-AC56_RS19700;Dbxref=GenBank:WP_001235611.1;Name=WP_001235611.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=mdlA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308529.1;locus_tag=AC56_RS19700;product=SmdA family multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_001235611.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	29154	30935	.	+	.	ID=gene-AC56_RS19695;Name=mdlB;gbkey=Gene;gene=mdlB;gene_biotype=protein_coding;locus_tag=AC56_RS19695;old_locus_tag=AC56_0472
NZ_JJLS01000118.1	Protein Homology	CDS	29154	30935	.	+	0	ID=cds-WP_032277942.1;Parent=gene-AC56_RS19695;Dbxref=GenBank:WP_032277942.1;Name=WP_032277942.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=mdlB;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308530.1;locus_tag=AC56_RS19695;product=SmdB family multidrug efflux ABC transporter permease/ATP-binding protein;protein_id=WP_032277942.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	31116	31454	.	+	.	ID=gene-AC56_RS19690;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=AC56_RS19690;old_locus_tag=AC56_0474
NZ_JJLS01000118.1	Protein Homology	CDS	31116	31454	.	+	0	ID=cds-WP_000780338.1;Parent=gene-AC56_RS19690;Dbxref=GenBank:WP_000780338.1;Name=WP_000780338.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;gene=glnK;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308531.1;locus_tag=AC56_RS19690;product=P-II family nitrogen regulator;protein_id=WP_000780338.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	31484	32770	.	+	.	ID=gene-AC56_RS19685;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;locus_tag=AC56_RS19685;old_locus_tag=AC56_0475
NZ_JJLS01000118.1	Protein Homology	CDS	31484	32770	.	+	0	ID=cds-WP_000685029.1;Parent=gene-AC56_RS19685;Dbxref=GenBank:WP_000685029.1;Name=WP_000685029.1;Ontology_term=GO:0072488,GO:0008519,GO:0005886;gbkey=CDS;gene=amtB;go_component=plasma membrane|0005886||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308532.1;locus_tag=AC56_RS19685;product=ammonium transporter AmtB;protein_id=WP_000685029.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	32819	33679	.	-	.	ID=gene-AC56_RS19680;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=AC56_RS19680;old_locus_tag=AC56_0476
NZ_JJLS01000118.1	Protein Homology	CDS	32819	33679	.	-	0	ID=cds-WP_000075876.1;Parent=gene-AC56_RS19680;Dbxref=GenBank:WP_000075876.1;Name=WP_000075876.1;gbkey=CDS;gene=tesB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308533.1;locus_tag=AC56_RS19680;product=acyl-CoA thioesterase II;protein_id=WP_000075876.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	33897	34469	.	+	.	ID=gene-AC56_RS19675;Name=ybaY;gbkey=Gene;gene=ybaY;gene_biotype=protein_coding;locus_tag=AC56_RS19675;old_locus_tag=AC56_0477
NZ_JJLS01000118.1	Protein Homology	CDS	33897	34469	.	+	0	ID=cds-WP_000779831.1;Parent=gene-AC56_RS19675;Dbxref=GenBank:WP_000779831.1;Name=WP_000779831.1;gbkey=CDS;gene=ybaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706347.1;locus_tag=AC56_RS19675;product=YbaY family lipoprotein;protein_id=WP_000779831.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	34500	34811	.	-	.	ID=gene-AC56_RS19670;Name=AC56_RS19670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS19670;old_locus_tag=AC56_0478
NZ_JJLS01000118.1	Protein Homology	CDS	34500	34811	.	-	0	ID=cds-WP_000409911.1;Parent=gene-AC56_RS19670;Dbxref=GenBank:WP_000409911.1;Name=WP_000409911.1;Ontology_term=GO:0006281,GO:0003677,GO:0003824,GO:0003908;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706349.2;locus_tag=AC56_RS19670;product=MGMT family protein;protein_id=WP_000409911.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	34974	35070	.	+	.	ID=gene-AC56_RS27890;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=AC56_RS27890
NZ_JJLS01000118.1	cmsearch	SRP_RNA	34974	35070	.	+	.	ID=rna-AC56_RS27890;Parent=gene-AC56_RS27890;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS27890;product=signal recognition particle sRNA small type
NZ_JJLS01000118.1	cmsearch	exon	34974	35070	.	+	.	ID=exon-AC56_RS27890-1;Parent=rna-AC56_RS27890;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS27890;product=signal recognition particle sRNA small type
NZ_JJLS01000118.1	RefSeq	gene	35190	35543	.	+	.	ID=gene-AC56_RS19665;Name=ybaA;gbkey=Gene;gene=ybaA;gene_biotype=protein_coding;locus_tag=AC56_RS19665;old_locus_tag=AC56_0479
NZ_JJLS01000118.1	Protein Homology	CDS	35190	35543	.	+	0	ID=cds-WP_000878140.1;Parent=gene-AC56_RS19665;Dbxref=GenBank:WP_000878140.1;Name=WP_000878140.1;gbkey=CDS;gene=ybaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308536.1;locus_tag=AC56_RS19665;product=DUF1428 domain-containing protein;protein_id=WP_000878140.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	35585	37135	.	-	.	ID=gene-AC56_RS19660;Name=pdeB;gbkey=Gene;gene=pdeB;gene_biotype=protein_coding;locus_tag=AC56_RS19660;old_locus_tag=AC56_0480
NZ_JJLS01000118.1	Protein Homology	CDS	35585	37135	.	-	0	ID=cds-WP_001310610.1;Parent=gene-AC56_RS19660;Dbxref=GenBank:WP_001310610.1;Name=WP_001310610.1;gbkey=CDS;gene=pdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414990.2;locus_tag=AC56_RS19660;product=cyclic-guanylate-specific phosphodiesterase PdeB;protein_id=WP_001310610.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	37299	37769	.	-	.	ID=gene-AC56_RS19655;Name=ylaC;gbkey=Gene;gene=ylaC;gene_biotype=protein_coding;locus_tag=AC56_RS19655;old_locus_tag=AC56_0481
NZ_JJLS01000118.1	Protein Homology	CDS	37299	37769	.	-	0	ID=cds-WP_000136192.1;Parent=gene-AC56_RS19655;Dbxref=GenBank:WP_000136192.1;Name=WP_000136192.1;gbkey=CDS;gene=ylaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308538.2;locus_tag=AC56_RS19655;product=YlaC family protein;protein_id=WP_000136192.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	37885	38436	.	-	.	ID=gene-AC56_RS19650;Name=maa;gbkey=Gene;gene=maa;gene_biotype=protein_coding;locus_tag=AC56_RS19650;old_locus_tag=AC56_0482
NZ_JJLS01000118.1	Protein Homology	CDS	37885	38436	.	-	0	ID=cds-WP_000102564.1;Parent=gene-AC56_RS19650;Dbxref=GenBank:WP_000102564.1;Name=WP_000102564.1;Ontology_term=GO:0016407;gbkey=CDS;gene=maa;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414992.1;locus_tag=AC56_RS19650;product=maltose O-acetyltransferase;protein_id=WP_000102564.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	38608	38826	.	-	.	ID=gene-AC56_RS19645;Name=hha;gbkey=Gene;gene=hha;gene_biotype=protein_coding;locus_tag=AC56_RS19645;old_locus_tag=AC56_0483
NZ_JJLS01000118.1	Protein Homology	CDS	38608	38826	.	-	0	ID=cds-WP_001291435.1;Parent=gene-AC56_RS19645;Dbxref=GenBank:WP_001291435.1;Name=WP_001291435.1;gbkey=CDS;gene=hha;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308540.1;locus_tag=AC56_RS19645;product=HHA domain-containing protein;protein_id=WP_001291435.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	38852	39226	.	-	.	ID=gene-AC56_RS19640;Name=tomB;gbkey=Gene;gene=tomB;gene_biotype=protein_coding;locus_tag=AC56_RS19640;old_locus_tag=AC56_0484
NZ_JJLS01000118.1	Protein Homology	CDS	38852	39226	.	-	0	ID=cds-WP_000344800.1;Parent=gene-AC56_RS19640;Dbxref=GenBank:WP_000344800.1;Name=WP_000344800.1;gbkey=CDS;gene=tomB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741190.1;locus_tag=AC56_RS19640;product=Hha toxicity modulator TomB;protein_id=WP_000344800.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	39772	42921	.	-	.	ID=gene-AC56_RS19635;Name=acrB;gbkey=Gene;gene=acrB;gene_biotype=protein_coding;locus_tag=AC56_RS19635;old_locus_tag=AC56_0485
NZ_JJLS01000118.1	Protein Homology	CDS	39772	42921	.	-	0	ID=cds-WP_001132469.1;Parent=gene-AC56_RS19635;Dbxref=GenBank:WP_001132469.1;Name=WP_001132469.1;gbkey=CDS;gene=acrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414995.1;locus_tag=AC56_RS19635;product=efflux RND transporter permease AcrB;protein_id=WP_001132469.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	42944	44137	.	-	.	ID=gene-AC56_RS19630;Name=acrA;gbkey=Gene;gene=acrA;gene_biotype=protein_coding;locus_tag=AC56_RS19630;old_locus_tag=AC56_0486
NZ_JJLS01000118.1	Protein Homology	CDS	42944	44137	.	-	0	ID=cds-WP_001295324.1;Parent=gene-AC56_RS19630;Dbxref=GenBank:WP_001295324.1;Name=WP_001295324.1;gbkey=CDS;gene=acrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308543.1;locus_tag=AC56_RS19630;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrA;protein_id=WP_001295324.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	44279	44926	.	+	.	ID=gene-AC56_RS19625;Name=acrR;gbkey=Gene;gene=acrR;gene_biotype=protein_coding;locus_tag=AC56_RS19625;old_locus_tag=AC56_0487
NZ_JJLS01000118.1	Protein Homology	CDS	44279	44926	.	+	0	ID=cds-WP_000101737.1;Parent=gene-AC56_RS19625;Dbxref=GenBank:WP_000101737.1;Name=WP_000101737.1;gbkey=CDS;gene=acrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414997.1;locus_tag=AC56_RS19625;product=multidrug efflux transporter transcriptional repressor AcrR;protein_id=WP_000101737.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	45054	48416	.	+	.	ID=gene-AC56_RS19620;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=protein_coding;locus_tag=AC56_RS19620;old_locus_tag=AC56_0488
NZ_JJLS01000118.1	Protein Homology	CDS	45054	48416	.	+	0	ID=cds-WP_000177732.1;Parent=gene-AC56_RS19620;Dbxref=GenBank:WP_000177732.1;Name=WP_000177732.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscK;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414998.1;locus_tag=AC56_RS19620;product=mechanosensitive channel MscK;protein_id=WP_000177732.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	48628	48789	.	-	.	ID=gene-AC56_RS19615;Name=rsmS;gbkey=Gene;gene=rsmS;gene_biotype=protein_coding;locus_tag=AC56_RS19615;old_locus_tag=AC56_0489
NZ_JJLS01000118.1	Protein Homology	CDS	48628	48789	.	-	0	ID=cds-WP_000051146.1;Parent=gene-AC56_RS19615;Dbxref=GenBank:WP_000051146.1;Name=WP_000051146.1;gbkey=CDS;gene=rsmS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414999.1;locus_tag=AC56_RS19615;product=pleiotropic regulatory protein RsmS;protein_id=WP_000051146.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	48803	49330	.	-	.	ID=gene-AC56_RS19610;Name=priC;gbkey=Gene;gene=priC;gene_biotype=protein_coding;locus_tag=AC56_RS19610;old_locus_tag=AC56_0490
NZ_JJLS01000118.1	Protein Homology	CDS	48803	49330	.	-	0	ID=cds-WP_000844876.1;Parent=gene-AC56_RS19610;Dbxref=GenBank:WP_000844876.1;Name=WP_000844876.1;gbkey=CDS;gene=priC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415000.1;locus_tag=AC56_RS19610;product=primosomal replication protein N'';protein_id=WP_000844876.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	49400	49777	.	+	.	ID=gene-AC56_RS19605;Name=ybaN;gbkey=Gene;gene=ybaN;gene_biotype=protein_coding;locus_tag=AC56_RS19605;old_locus_tag=AC56_0491
NZ_JJLS01000118.1	Protein Homology	CDS	49400	49777	.	+	0	ID=cds-WP_001188905.1;Parent=gene-AC56_RS19605;Dbxref=GenBank:WP_001188905.1;Name=WP_001188905.1;gbkey=CDS;gene=ybaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308548.1;locus_tag=AC56_RS19605;product=DUF454 family protein;protein_id=WP_001188905.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	49930	50481	.	+	.	ID=gene-AC56_RS19600;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=AC56_RS19600;old_locus_tag=AC56_0492
NZ_JJLS01000118.1	Protein Homology	CDS	49930	50481	.	+	0	ID=cds-WP_000127356.1;Parent=gene-AC56_RS19600;Dbxref=GenBank:WP_000127356.1;Name=WP_000127356.1;Ontology_term=GO:0006168,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125198.1;locus_tag=AC56_RS19600;product=adenine phosphoribosyltransferase;protein_id=WP_000127356.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	50610	52541	.	+	.	ID=gene-AC56_RS19595;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=AC56_RS19595;old_locus_tag=AC56_0493
NZ_JJLS01000118.1	Protein Homology	CDS	50610	52541	.	+	0	ID=cds-WP_000122010.1;Parent=gene-AC56_RS19595;Dbxref=GenBank:WP_000122010.1;Name=WP_000122010.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308550.1;locus_tag=AC56_RS19595;product=DNA polymerase III subunit gamma/tau;protein_id=WP_000122010.1;transl_table=11
NZ_JJLS01000118.1	cmsearch	sequence_feature	51874	51938	.	+	.	ID=id-AC56_RS19595;Dbxref=RFAM:RF00382;Note=DnaX frameshifting element;gbkey=misc_feature;gene=dnaX;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS19595
NZ_JJLS01000118.1	RefSeq	gene	52594	52923	.	+	.	ID=gene-AC56_RS19590;Name=ybaB;gbkey=Gene;gene=ybaB;gene_biotype=protein_coding;locus_tag=AC56_RS19590;old_locus_tag=AC56_0494
NZ_JJLS01000118.1	Protein Homology	CDS	52594	52923	.	+	0	ID=cds-WP_000467098.1;Parent=gene-AC56_RS19590;Dbxref=GenBank:WP_000467098.1;Name=WP_000467098.1;Ontology_term=GO:0003677;gbkey=CDS;gene=ybaB;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=AC56_RS19590;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_000467098.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	52923	53528	.	+	.	ID=gene-AC56_RS19585;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=AC56_RS19585;old_locus_tag=AC56_0495
NZ_JJLS01000118.1	Protein Homology	CDS	52923	53528	.	+	0	ID=cds-WP_001195025.1;Parent=gene-AC56_RS19585;Dbxref=GenBank:WP_001195025.1;Name=WP_001195025.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308552.1;locus_tag=AC56_RS19585;product=recombination mediator RecR;protein_id=WP_001195025.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	53638	55512	.	+	.	ID=gene-AC56_RS19580;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=AC56_RS19580;old_locus_tag=AC56_0496
NZ_JJLS01000118.1	Protein Homology	CDS	53638	55512	.	+	0	ID=cds-WP_000678201.1;Parent=gene-AC56_RS19580;Dbxref=GenBank:WP_000678201.1;Name=WP_000678201.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003903109.1;locus_tag=AC56_RS19580;product=molecular chaperone HtpG;protein_id=WP_000678201.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	55693	56337	.	+	.	ID=gene-AC56_RS19575;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=AC56_RS19575;old_locus_tag=AC56_0498
NZ_JJLS01000118.1	Protein Homology	CDS	55693	56337	.	+	0	ID=cds-WP_001220233.1;Parent=gene-AC56_RS19575;Dbxref=GenBank:WP_001220233.1;Name=WP_001220233.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=adenylate kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706188.1;locus_tag=AC56_RS19575;product=adenylate kinase;protein_id=WP_001220233.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	56573	57535	.	+	.	ID=gene-AC56_RS19570;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=AC56_RS19570;old_locus_tag=AC56_0499
NZ_JJLS01000118.1	Protein Homology	CDS	56573	57535	.	+	0	ID=cds-WP_001250088.1;Parent=gene-AC56_RS19570;Dbxref=GenBank:WP_001250088.1;Name=WP_001250088.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308555.1;locus_tag=AC56_RS19570;product=ferrochelatase;protein_id=WP_001250088.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	57532	58491	.	-	.	ID=gene-AC56_RS19565;Name=aes;gbkey=Gene;gene=aes;gene_biotype=protein_coding;locus_tag=AC56_RS19565;old_locus_tag=AC56_0500
NZ_JJLS01000118.1	Protein Homology	CDS	57532	58491	.	-	0	ID=cds-WP_000801848.1;Parent=gene-AC56_RS19565;Dbxref=GenBank:WP_000801848.1;Name=WP_000801848.1;Ontology_term=GO:0016787;gbkey=CDS;gene=aes;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415009.1;locus_tag=AC56_RS19565;product=acetyl esterase;protein_id=WP_000801848.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	58643	59947	.	+	.	ID=gene-AC56_RS19560;Name=gsk;gbkey=Gene;gene=gsk;gene_biotype=protein_coding;locus_tag=AC56_RS19560;old_locus_tag=AC56_0501
NZ_JJLS01000118.1	Protein Homology	CDS	58643	59947	.	+	0	ID=cds-WP_000671574.1;Parent=gene-AC56_RS19560;Dbxref=GenBank:WP_000671574.1;Name=WP_000671574.1;gbkey=CDS;gene=gsk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308557.1;locus_tag=AC56_RS19560;product=inosine/guanosine kinase;protein_id=WP_000671574.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	60080	61756	.	-	.	ID=gene-AC56_RS19555;Name=ybaL;gbkey=Gene;gene=ybaL;gene_biotype=protein_coding;locus_tag=AC56_RS19555;old_locus_tag=AC56_0502
NZ_JJLS01000118.1	Protein Homology	CDS	60080	61756	.	-	0	ID=cds-WP_000546237.1;Parent=gene-AC56_RS19555;Dbxref=GenBank:WP_000546237.1;Name=WP_000546237.1;Ontology_term=GO:0006813,GO:0008324,GO:0051139,GO:0016020;gbkey=CDS;gene=ybaL;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415011.1;locus_tag=AC56_RS19555;product=YbaL family putative K(+) efflux transporter;protein_id=WP_000546237.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	61994	63214	.	-	.	ID=gene-AC56_RS19550;Name=fsr;gbkey=Gene;gene=fsr;gene_biotype=protein_coding;locus_tag=AC56_RS19550;old_locus_tag=AC56_0503
NZ_JJLS01000118.1	Protein Homology	CDS	61994	63214	.	-	0	ID=cds-WP_001606243.1;Parent=gene-AC56_RS19550;Dbxref=GenBank:WP_001606243.1;Name=WP_001606243.1;gbkey=CDS;gene=fsr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415012.1;locus_tag=AC56_RS19550;product=fosmidomycin MFS transporter;protein_id=WP_001606243.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	63432	65084	.	+	.	ID=gene-AC56_RS19545;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=AC56_RS19545;old_locus_tag=AC56_0504
NZ_JJLS01000118.1	Protein Homology	CDS	63432	65084	.	+	0	ID=cds-WP_000771748.1;Parent=gene-AC56_RS19545;Dbxref=GenBank:WP_000771748.1;Name=WP_000771748.1;gbkey=CDS;gene=ushA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415013.1;locus_tag=AC56_RS19545;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase;protein_id=WP_000771748.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	65121	65600	.	-	.	ID=gene-AC56_RS19540;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=AC56_RS19540;old_locus_tag=AC56_0505
NZ_JJLS01000118.1	Protein Homology	CDS	65121	65600	.	-	0	ID=cds-WP_000186631.1;Parent=gene-AC56_RS19540;Dbxref=GenBank:WP_000186631.1;Name=WP_000186631.1;Ontology_term=GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA deacylase activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818871.1;locus_tag=AC56_RS19540;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;protein_id=WP_000186631.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	65804	66598	.	-	.	ID=gene-AC56_RS19535;Name=ybaP;gbkey=Gene;gene=ybaP;gene_biotype=protein_coding;locus_tag=AC56_RS19535;old_locus_tag=AC56_0506
NZ_JJLS01000118.1	Protein Homology	CDS	65804	66598	.	-	0	ID=cds-WP_000365173.1;Parent=gene-AC56_RS19535;Dbxref=GenBank:WP_000365173.1;Name=WP_000365173.1;Ontology_term=GO:0008233;gbkey=CDS;gene=ybaP;go_function=peptidase activity|0008233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415015.1;locus_tag=AC56_RS19535;product=TraB/GumN family protein;protein_id=WP_000365173.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	66736	67077	.	+	.	ID=gene-AC56_RS19530;Name=ybaQ;gbkey=Gene;gene=ybaQ;gene_biotype=protein_coding;locus_tag=AC56_RS19530;old_locus_tag=AC56_0507
NZ_JJLS01000118.1	Protein Homology	CDS	66736	67077	.	+	0	ID=cds-WP_001338329.1;Parent=gene-AC56_RS19530;Dbxref=GenBank:WP_001338329.1;Name=WP_001338329.1;Ontology_term=GO:0003677;gbkey=CDS;gene=ybaQ;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415016.4;locus_tag=AC56_RS19530;product=HigA family addiction module antitoxin;protein_id=WP_001338329.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	67292	69796	.	-	.	ID=gene-AC56_RS19525;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=AC56_RS19525;old_locus_tag=AC56_0508
NZ_JJLS01000118.1	Protein Homology	CDS	67292	69796	.	-	0	ID=cds-WP_032277943.1;Parent=gene-AC56_RS19525;Dbxref=GenBank:WP_032277943.1;Name=WP_032277943.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;gene=copA;go_function=ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308564.1;locus_tag=AC56_RS19525;product=copper-exporting P-type ATPase CopA;protein_id=WP_032277943.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	70058	70990	.	+	.	ID=gene-AC56_RS19520;Name=glsA;gbkey=Gene;gene=glsA;gene_biotype=protein_coding;locus_tag=AC56_RS19520;old_locus_tag=AC56_0509
NZ_JJLS01000118.1	Protein Homology	CDS	70058	70990	.	+	0	ID=cds-WP_000883019.1;Parent=gene-AC56_RS19520;Dbxref=GenBank:WP_000883019.1;Name=WP_000883019.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsA;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706378.1;locus_tag=AC56_RS19520;product=glutaminase A;protein_id=WP_000883019.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	70993	72285	.	+	.	ID=gene-AC56_RS19515;Name=ybaT;gbkey=Gene;gene=ybaT;gene_biotype=protein_coding;locus_tag=AC56_RS19515;old_locus_tag=AC56_0510
NZ_JJLS01000118.1	Protein Homology	CDS	70993	72285	.	+	0	ID=cds-WP_000982172.1;Parent=gene-AC56_RS19515;Dbxref=GenBank:WP_000982172.1;Name=WP_000982172.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;gene=ybaT;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415019.1;locus_tag=AC56_RS19515;product=APC family permease;protein_id=WP_000982172.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	pseudogene	72316	72413	.	+	.	ID=gene-AC56_RS33225;Name=AC56_RS33225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33225;partial=true;pseudo=true;start_range=.,72316
NZ_JJLS01000118.1	Protein Homology	CDS	72316	72413	.	+	0	ID=cds-AC56_RS33225;Parent=gene-AC56_RS33225;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308571.1;locus_tag=AC56_RS33225;partial=true;product=hypothetical protein;pseudo=true;start_range=.,72316;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	72410	72817	.	+	.	ID=gene-AC56_RS19510;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=AC56_RS19510;old_locus_tag=AC56_0511
NZ_JJLS01000118.1	Protein Homology	CDS	72410	72817	.	+	0	ID=cds-WP_001026747.1;Parent=gene-AC56_RS19510;Dbxref=GenBank:WP_001026747.1;Name=WP_001026747.1;gbkey=CDS;gene=cueR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415020.1;locus_tag=AC56_RS19510;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_001026747.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	72818	73276	.	-	.	ID=gene-AC56_RS19505;Name=ybbJ;gbkey=Gene;gene=ybbJ;gene_biotype=protein_coding;locus_tag=AC56_RS19505;old_locus_tag=AC56_0512
NZ_JJLS01000118.1	Protein Homology	CDS	72818	73276	.	-	0	ID=cds-WP_000970321.1;Parent=gene-AC56_RS19505;Dbxref=GenBank:WP_000970321.1;Name=WP_000970321.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ybbJ;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415021.2;locus_tag=AC56_RS19505;product=NfeD family protein;protein_id=WP_000970321.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	73273	74190	.	-	.	ID=gene-AC56_RS19500;Name=qmcA;gbkey=Gene;gene=qmcA;gene_biotype=protein_coding;locus_tag=AC56_RS19500;old_locus_tag=AC56_0513
NZ_JJLS01000118.1	Protein Homology	CDS	73273	74190	.	-	0	ID=cds-WP_000904502.1;Parent=gene-AC56_RS19500;Dbxref=GenBank:WP_000904502.1;Name=WP_000904502.1;Ontology_term=GO:0016020;gbkey=CDS;gene=qmcA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308579.1;locus_tag=AC56_RS19500;product=SPFH domain-containing protein;protein_id=WP_000904502.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	74336	75013	.	+	.	ID=gene-AC56_RS19495;Name=fetA;gbkey=Gene;gene=fetA;gene_biotype=protein_coding;gene_synonym=ybbL;locus_tag=AC56_RS19495;old_locus_tag=AC56_0514
NZ_JJLS01000118.1	Protein Homology	CDS	74336	75013	.	+	0	ID=cds-WP_001157540.1;Parent=gene-AC56_RS19495;Dbxref=GenBank:WP_001157540.1;Name=WP_001157540.1;Ontology_term=GO:1903988,GO:0016887;gbkey=CDS;gene=fetA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415023.1;locus_tag=AC56_RS19495;product=iron efflux ABC transporter ATP-binding subunit FetA;protein_id=WP_001157540.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	75000	75779	.	+	.	ID=gene-AC56_RS19490;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=AC56_RS19490;old_locus_tag=AC56_0515
NZ_JJLS01000118.1	Protein Homology	CDS	75000	75779	.	+	0	ID=cds-WP_001295323.1;Parent=gene-AC56_RS19490;Dbxref=GenBank:WP_001295323.1;Name=WP_001295323.1;Ontology_term=GO:1903988,GO:0005886;gbkey=CDS;gene=fetB;go_component=plasma membrane|0005886||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308581.2;locus_tag=AC56_RS19490;product=iron efflux ABC transporter permease subunit FetB;protein_id=WP_001295323.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	75842	76696	.	-	.	ID=gene-AC56_RS19485;Name=cnoX;gbkey=Gene;gene=cnoX;gene_biotype=protein_coding;locus_tag=AC56_RS19485;old_locus_tag=AC56_0516
NZ_JJLS01000118.1	Protein Homology	CDS	75842	76696	.	-	0	ID=cds-WP_001300573.1;Parent=gene-AC56_RS19485;Dbxref=GenBank:WP_001300573.1;Name=WP_001300573.1;gbkey=CDS;gene=cnoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415025.4;locus_tag=AC56_RS19485;product=chaperedoxin;protein_id=WP_001300573.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	76757	77566	.	-	.	ID=gene-AC56_RS19480;Name=ybbO;gbkey=Gene;gene=ybbO;gene_biotype=protein_coding;locus_tag=AC56_RS19480;old_locus_tag=AC56_0517
NZ_JJLS01000118.1	Protein Homology	CDS	76757	77566	.	-	0	ID=cds-WP_000148959.1;Parent=gene-AC56_RS19480;Dbxref=GenBank:WP_000148959.1;Name=WP_000148959.1;gbkey=CDS;gene=ybbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415026.1;locus_tag=AC56_RS19480;product=NADP(+)-dependent aldehyde reductase;protein_id=WP_000148959.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	77556	78179	.	-	.	ID=gene-AC56_RS19475;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=AC56_RS19475;old_locus_tag=AC56_0518
NZ_JJLS01000118.1	Protein Homology	CDS	77556	78179	.	-	0	ID=cds-WP_001295836.1;Parent=gene-AC56_RS19475;Dbxref=GenBank:WP_001295836.1;Name=WP_001295836.1;Ontology_term=GO:0006629,GO:0016298;gbkey=CDS;gene=tesA;go_function=lipase activity|0016298||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225520.1;locus_tag=AC56_RS19475;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=WP_001295836.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	78150	78836	.	+	.	ID=gene-AC56_RS19470;Name=ybbA;gbkey=Gene;gene=ybbA;gene_biotype=protein_coding;locus_tag=AC56_RS19470;old_locus_tag=AC56_0519
NZ_JJLS01000118.1	Protein Homology	CDS	78150	78836	.	+	0	ID=cds-WP_032277944.1;Parent=gene-AC56_RS19470;Dbxref=GenBank:WP_032277944.1;Name=WP_032277944.1;gbkey=CDS;gene=ybbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415028.1;locus_tag=AC56_RS19470;product=putative ABC transporter ATP-binding protein YbbA;protein_id=WP_032277944.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	78833	81247	.	+	.	ID=gene-AC56_RS19465;Name=ybbP;gbkey=Gene;gene=ybbP;gene_biotype=protein_coding;locus_tag=AC56_RS19465;old_locus_tag=AC56_0520
NZ_JJLS01000118.1	Protein Homology	CDS	78833	81247	.	+	0	ID=cds-WP_000561866.1;Parent=gene-AC56_RS19465;Dbxref=GenBank:WP_000561866.1;Name=WP_000561866.1;gbkey=CDS;gene=ybbP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415029.1;locus_tag=AC56_RS19465;product=putative ABC transporter permease subunit YbbP;protein_id=WP_000561866.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	81464	81619	.	-	.	ID=gene-AC56_RS33910;Name=dinQ;gbkey=Gene;gene=dinQ;gene_biotype=protein_coding;locus_tag=AC56_RS33910
NZ_JJLS01000118.1	Protein Homology	CDS	81464	81619	.	-	0	ID=cds-WP_001308457.1;Parent=gene-AC56_RS33910;Dbxref=GenBank:WP_001308457.1;Name=WP_001308457.1;gbkey=CDS;gene=dinQ;inference=COORDINATES: protein motif:HMM:NF041472.1;locus_tag=AC56_RS33910;product=damage-inducible type I toxin DinQ;protein_id=WP_001308457.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	81959	83053	.	-	.	ID=gene-AC56_RS19460;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=AC56_RS19460;old_locus_tag=AC56_0522
NZ_JJLS01000118.1	Protein Homology	CDS	81959	83053	.	-	0	ID=cds-WP_001157986.1;Parent=gene-AC56_RS19460;Dbxref=GenBank:WP_001157986.1;Name=WP_001157986.1;Ontology_term=GO:0002098,GO:0043828;gbkey=CDS;gene=mnmH;go_function=tRNA 2-selenouridine synthase activity|0043828||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308591.1;locus_tag=AC56_RS19460;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=WP_001157986.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	83122	84048	.	-	.	ID=gene-AC56_RS19455;Name=allS;gbkey=Gene;gene=allS;gene_biotype=protein_coding;locus_tag=AC56_RS19455;old_locus_tag=AC56_0523
NZ_JJLS01000118.1	Protein Homology	CDS	83122	84048	.	-	0	ID=cds-WP_000460145.1;Parent=gene-AC56_RS19455;Dbxref=GenBank:WP_000460145.1;Name=WP_000460145.1;gbkey=CDS;gene=allS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308592.1;locus_tag=AC56_RS19455;product=HTH-type transcriptional activator AllS;protein_id=WP_000460145.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	84278	84760	.	+	.	ID=gene-AC56_RS19450;Name=allA;gbkey=Gene;gene=allA;gene_biotype=protein_coding;locus_tag=AC56_RS19450;old_locus_tag=AC56_0524
NZ_JJLS01000118.1	Protein Homology	CDS	84278	84760	.	+	0	ID=cds-WP_000776388.1;Parent=gene-AC56_RS19450;Dbxref=GenBank:WP_000776388.1;Name=WP_000776388.1;gbkey=CDS;gene=allA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308593.1;locus_tag=AC56_RS19450;product=ureidoglycolate lyase;protein_id=WP_000776388.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	84838	85653	.	+	.	ID=gene-AC56_RS19445;Name=allR;gbkey=Gene;gene=allR;gene_biotype=protein_coding;locus_tag=AC56_RS19445;old_locus_tag=AC56_0525
NZ_JJLS01000118.1	Protein Homology	CDS	84838	85653	.	+	0	ID=cds-WP_000141275.1;Parent=gene-AC56_RS19445;Dbxref=GenBank:WP_000141275.1;Name=WP_000141275.1;gbkey=CDS;gene=allR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308594.1;locus_tag=AC56_RS19445;product=HTH-type transcriptional repressor AllR;protein_id=WP_000141275.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	85743	87524	.	+	.	ID=gene-AC56_RS19440;Name=gcl;gbkey=Gene;gene=gcl;gene_biotype=protein_coding;locus_tag=AC56_RS19440;old_locus_tag=AC56_0526
NZ_JJLS01000118.1	Protein Homology	CDS	85743	87524	.	+	0	ID=cds-WP_032277945.1;Parent=gene-AC56_RS19440;Dbxref=GenBank:WP_032277945.1;Name=WP_032277945.1;Ontology_term=GO:0009436,GO:0009028;gbkey=CDS;gene=gcl;go_function=tartronate-semialdehyde synthase activity|0009028||IEA;go_process=glyoxylate catabolic process|0009436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308595.1;locus_tag=AC56_RS19440;product=glyoxylate carboligase;protein_id=WP_032277945.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	87537	88313	.	+	.	ID=gene-AC56_RS19435;Name=hyi;gbkey=Gene;gene=hyi;gene_biotype=protein_coding;locus_tag=AC56_RS19435;old_locus_tag=AC56_0527
NZ_JJLS01000118.1	Protein Homology	CDS	87537	88313	.	+	0	ID=cds-WP_032277946.1;Parent=gene-AC56_RS19435;Dbxref=GenBank:WP_032277946.1;Name=WP_032277946.1;gbkey=CDS;gene=hyi;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308596.1;locus_tag=AC56_RS19435;product=hydroxypyruvate isomerase;protein_id=WP_032277946.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	88413	89291	.	+	.	ID=gene-AC56_RS19430;Name=glxR;gbkey=Gene;gene=glxR;gene_biotype=protein_coding;locus_tag=AC56_RS19430;old_locus_tag=AC56_0528
NZ_JJLS01000118.1	Protein Homology	CDS	88413	89291	.	+	0	ID=cds-WP_032277947.1;Parent=gene-AC56_RS19430;Dbxref=GenBank:WP_032277947.1;Name=WP_032277947.1;Ontology_term=GO:0046487,GO:0008679,GO:0051287;gbkey=CDS;gene=glxR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA,NAD binding|0051287||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415042.1;locus_tag=AC56_RS19430;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_032277947.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	89461	90915	.	+	.	ID=gene-AC56_RS19425;Name=allW;gbkey=Gene;gene=allW;gene_biotype=protein_coding;locus_tag=AC56_RS19425;old_locus_tag=AC56_0529
NZ_JJLS01000118.1	Protein Homology	CDS	89461	90915	.	+	0	ID=cds-WP_001514997.1;Parent=gene-AC56_RS19425;Dbxref=GenBank:WP_001514997.1;Name=WP_001514997.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=allW;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415044.4;locus_tag=AC56_RS19425;product=allantoin transporter;protein_id=WP_001514997.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	gene	90976	92337	.	+	.	ID=gene-AC56_RS19420;Name=allB;gbkey=Gene;gene=allB;gene_biotype=protein_coding;locus_tag=AC56_RS19420;old_locus_tag=AC56_0530
NZ_JJLS01000118.1	Protein Homology	CDS	90976	92337	.	+	0	ID=cds-WP_000006887.1;Parent=gene-AC56_RS19420;Dbxref=GenBank:WP_000006887.1;Name=WP_000006887.1;Ontology_term=GO:0000256,GO:0004038;gbkey=CDS;gene=allB;go_function=allantoinase activity|0004038||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415045.1;locus_tag=AC56_RS19420;product=allantoinase AllB;protein_id=WP_000006887.1;transl_table=11
NZ_JJLS01000118.1	RefSeq	pseudogene	92394	92762	.	+	.	ID=gene-AC56_RS19415;Name=AC56_RS19415;end_range=92762,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS19415;old_locus_tag=AC56_0531;partial=true;pseudo=true
NZ_JJLS01000118.1	Protein Homology	CDS	92394	92762	.	+	0	ID=cds-AC56_RS19415;Parent=gene-AC56_RS19415;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0016020;end_range=92762,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308602.2;locus_tag=AC56_RS19415;partial=true;product=solute carrier family 23 protein;pseudo=true;transl_table=11
NZ_JJLS01000118.1	RefSeq	pseudogene	92818	93199	.	-	.	ID=gene-AC56_RS19410;Name=AC56_RS19410;end_range=93199,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS19410;old_locus_tag=AC56_0532;partial=true;pseudo=true
NZ_JJLS01000118.1	Protein Homology	CDS	92818	93199	.	-	1	ID=cds-AC56_RS19410;Parent=gene-AC56_RS19410;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=93199,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS19410;partial=true;product=IS5-like element IS903B family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000119.1 1 17959
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000119.1	RefSeq	region	1	17959	.	+	.	ID=NZ_JJLS01000119.1:1..17959;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000119.1	RefSeq	gene	1	543	.	-	.	ID=gene-AC56_RS19405;Name=AC56_RS19405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS19405;old_locus_tag=AC56_0533;partial=true;start_range=.,1
NZ_JJLS01000119.1	Protein Homology	CDS	1	543	.	-	0	ID=cds-WP_162752766.1;Parent=gene-AC56_RS19405;Dbxref=GenBank:WP_162752766.1;Name=WP_162752766.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS19405;partial=true;product=IS5 family transposase;protein_id=WP_162752766.1;start_range=.,1;transl_table=11
NZ_JJLS01000119.1	RefSeq	pseudogene	577	1518	.	+	.	ID=gene-AC56_RS19400;Name=AC56_RS19400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS19400;old_locus_tag=AC56_0534;partial=true;pseudo=true;start_range=.,577
NZ_JJLS01000119.1	Protein Homology	CDS	577	1518	.	+	0	ID=cds-AC56_RS19400;Parent=gene-AC56_RS19400;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308602.2;locus_tag=AC56_RS19400;partial=true;product=uracil/xanthine transporter;pseudo=true;start_range=.,577;transl_table=11
NZ_JJLS01000119.1	RefSeq	gene	1540	2685	.	+	.	ID=gene-AC56_RS19395;Name=glxK;gbkey=Gene;gene=glxK;gene_biotype=protein_coding;locus_tag=AC56_RS19395;old_locus_tag=AC56_0535
NZ_JJLS01000119.1	Protein Homology	CDS	1540	2685	.	+	0	ID=cds-WP_000706344.1;Parent=gene-AC56_RS19395;Dbxref=GenBank:WP_000706344.1;Name=WP_000706344.1;gbkey=CDS;gene=glxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415047.1;locus_tag=AC56_RS19395;product=glycerate 3-kinase;protein_id=WP_000706344.1;transl_table=11
NZ_JJLS01000119.1	RefSeq	gene	2913	3698	.	-	.	ID=gene-AC56_RS19390;Name=allE;gbkey=Gene;gene=allE;gene_biotype=protein_coding;locus_tag=AC56_RS19390;old_locus_tag=AC56_0536
NZ_JJLS01000119.1	Protein Homology	CDS	2913	3698	.	-	0	ID=cds-WP_032277951.1;Parent=gene-AC56_RS19390;Dbxref=GenBank:WP_032277951.1;Name=WP_032277951.1;Ontology_term=GO:0010136,GO:0071522;gbkey=CDS;gene=allE;go_function=ureidoglycine aminohydrolase activity|0071522||IEA;go_process=ureide catabolic process|0010136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308604.1;locus_tag=AC56_RS19390;product=(S)-ureidoglycine aminohydrolase;protein_id=WP_032277951.1;transl_table=11
NZ_JJLS01000119.1	RefSeq	gene	3709	4944	.	-	.	ID=gene-AC56_RS19385;Name=allC;gbkey=Gene;gene=allC;gene_biotype=protein_coding;locus_tag=AC56_RS19385;old_locus_tag=AC56_0537
NZ_JJLS01000119.1	Protein Homology	CDS	3709	4944	.	-	0	ID=cds-WP_032277952.1;Parent=gene-AC56_RS19385;Dbxref=GenBank:WP_032277952.1;Name=WP_032277952.1;Ontology_term=GO:0000256,GO:0009442,GO:0047652;gbkey=CDS;gene=allC;go_function=allantoate deiminase activity|0047652||IEA;go_process=allantoin catabolic process|0000256||IEA,allantoin assimilation pathway|0009442||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415049.1;locus_tag=AC56_RS19385;product=allantoate deiminase;protein_id=WP_032277952.1;transl_table=11
NZ_JJLS01000119.1	RefSeq	gene	4966	6015	.	-	.	ID=gene-AC56_RS19380;Name=allD;gbkey=Gene;gene=allD;gene_biotype=protein_coding;locus_tag=AC56_RS19380;old_locus_tag=AC56_0538
NZ_JJLS01000119.1	Protein Homology	CDS	4966	6015	.	-	0	ID=cds-WP_032277953.1;Parent=gene-AC56_RS19380;Dbxref=GenBank:WP_032277953.1;Name=WP_032277953.1;Ontology_term=GO:0016491;gbkey=CDS;gene=allD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308606.1;locus_tag=AC56_RS19380;product=ureidoglycolate dehydrogenase;protein_id=WP_032277953.1;transl_table=11
NZ_JJLS01000119.1	RefSeq	gene	6332	7999	.	+	.	ID=gene-AC56_RS19375;Name=fdrA;gbkey=Gene;gene=fdrA;gene_biotype=protein_coding;locus_tag=AC56_RS19375;old_locus_tag=AC56_0539
NZ_JJLS01000119.1	Protein Homology	CDS	6332	7999	.	+	0	ID=cds-WP_004014539.1;Parent=gene-AC56_RS19375;Dbxref=GenBank:WP_004014539.1;Name=WP_004014539.1;gbkey=CDS;gene=fdrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308607.1;locus_tag=AC56_RS19375;product=acyl-CoA synthetase FdrA;protein_id=WP_004014539.1;transl_table=11
NZ_JJLS01000119.1	RefSeq	gene	8009	9268	.	+	.	ID=gene-AC56_RS19370;Name=ylbE;gbkey=Gene;gene=ylbE;gene_biotype=protein_coding;locus_tag=AC56_RS19370;old_locus_tag=AC56_0540
NZ_JJLS01000119.1	Protein Homology	CDS	8009	9268	.	+	0	ID=cds-WP_032277954.1;Parent=gene-AC56_RS19370;Dbxref=GenBank:WP_032277954.1;Name=WP_032277954.1;gbkey=CDS;gene=ylbE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009029994.1;locus_tag=AC56_RS19370;product=DUF1116 domain-containing protein;protein_id=WP_032277954.1;transl_table=11
NZ_JJLS01000119.1	RefSeq	gene	9279	10094	.	+	.	ID=gene-AC56_RS19365;Name=ylbF;gbkey=Gene;gene=ylbF;gene_biotype=protein_coding;locus_tag=AC56_RS19365;old_locus_tag=AC56_0541
NZ_JJLS01000119.1	Protein Homology	CDS	9279	10094	.	+	0	ID=cds-WP_001306952.1;Parent=gene-AC56_RS19365;Dbxref=GenBank:WP_001306952.1;Name=WP_001306952.1;gbkey=CDS;gene=ylbF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308609.1;locus_tag=AC56_RS19365;product=DUF2877 domain-containing protein;protein_id=WP_001306952.1;transl_table=11
NZ_JJLS01000119.1	RefSeq	gene	10091	10984	.	+	.	ID=gene-AC56_RS19360;Name=ybcF;gbkey=Gene;gene=ybcF;gene_biotype=protein_coding;locus_tag=AC56_RS19360;old_locus_tag=AC56_0542
NZ_JJLS01000119.1	Protein Homology	CDS	10091	10984	.	+	0	ID=cds-WP_032277955.1;Parent=gene-AC56_RS19360;Dbxref=GenBank:WP_032277955.1;Name=WP_032277955.1;Ontology_term=GO:0006525,GO:0008804;gbkey=CDS;gene=ybcF;go_function=carbamate kinase activity|0008804||IEA;go_process=arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706399.1;locus_tag=AC56_RS19360;product=carbamate kinase;protein_id=WP_032277955.1;transl_table=11
NZ_JJLS01000119.1	RefSeq	gene	11121	12188	.	-	.	ID=gene-AC56_RS19355;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=AC56_RS19355;old_locus_tag=AC56_0543
NZ_JJLS01000119.1	Protein Homology	CDS	11121	12188	.	-	0	ID=cds-WP_000815536.1;Parent=gene-AC56_RS19355;Dbxref=GenBank:WP_000815536.1;Name=WP_000815536.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415055.1;locus_tag=AC56_RS19355;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_000815536.1;transl_table=11
NZ_JJLS01000119.1	RefSeq	gene	12185	12694	.	-	.	ID=gene-AC56_RS19350;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=AC56_RS19350;old_locus_tag=AC56_0544
NZ_JJLS01000119.1	Protein Homology	CDS	12185	12694	.	-	0	ID=cds-WP_001351650.1;Parent=gene-AC56_RS19350;Dbxref=GenBank:WP_001351650.1;Name=WP_001351650.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308612.1;locus_tag=AC56_RS19350;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_001351650.1;transl_table=11
NZ_JJLS01000119.1	RefSeq	gene	12812	13534	.	-	.	ID=gene-AC56_RS19345;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=AC56_RS19345;old_locus_tag=AC56_0545
NZ_JJLS01000119.1	Protein Homology	CDS	12812	13534	.	-	0	ID=cds-WP_000212252.1;Parent=gene-AC56_RS19345;Dbxref=GenBank:WP_000212252.1;Name=WP_000212252.1;Ontology_term=GO:0009245,GO:0008758,GO:0016462,GO:0005737;gbkey=CDS;gene=lpxH;go_component=cytoplasm|0005737||IEA;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA,pyrophosphatase activity|0016462||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706402.1;locus_tag=AC56_RS19345;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_000212252.1;transl_table=11
NZ_JJLS01000119.1	RefSeq	gene	13537	14031	.	-	.	ID=gene-AC56_RS19340;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=AC56_RS19340;old_locus_tag=AC56_0546
NZ_JJLS01000119.1	Protein Homology	CDS	13537	14031	.	-	0	ID=cds-WP_000255997.1;Parent=gene-AC56_RS19340;Dbxref=GenBank:WP_000255997.1;Name=WP_000255997.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465360.1;locus_tag=AC56_RS19340;product=peptidylprolyl isomerase B;protein_id=WP_000255997.1;transl_table=11
NZ_JJLS01000119.1	RefSeq	gene	14205	15590	.	+	.	ID=gene-AC56_RS19335;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=AC56_RS19335;old_locus_tag=AC56_0547
NZ_JJLS01000119.1	Protein Homology	CDS	14205	15590	.	+	0	ID=cds-WP_000912345.1;Parent=gene-AC56_RS19335;Dbxref=GenBank:WP_000912345.1;Name=WP_000912345.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125243.1;locus_tag=AC56_RS19335;product=cysteine--tRNA ligase;protein_id=WP_000912345.1;transl_table=11
NZ_JJLS01000119.1	RefSeq	gene	15680	16147	.	-	.	ID=gene-AC56_RS19330;Name=AC56_RS19330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS19330;old_locus_tag=AC56_0548
NZ_JJLS01000119.1	Protein Homology	CDS	15680	16147	.	-	0	ID=cds-WP_050439674.1;Parent=gene-AC56_RS19330;Dbxref=GenBank:WP_050439674.1;Name=WP_050439674.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308616.1;locus_tag=AC56_RS19330;product=metal-dependent hydrolase;protein_id=WP_050439674.1;transl_table=11
NZ_JJLS01000119.1	RefSeq	gene	16255	16467	.	-	.	ID=gene-AC56_RS19325;Name=ybcJ;gbkey=Gene;gene=ybcJ;gene_biotype=protein_coding;locus_tag=AC56_RS19325;old_locus_tag=AC56_0549
NZ_JJLS01000119.1	Protein Homology	CDS	16255	16467	.	-	0	ID=cds-WP_000190293.1;Parent=gene-AC56_RS19325;Dbxref=GenBank:WP_000190293.1;Name=WP_000190293.1;gbkey=CDS;gene=ybcJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308617.2;locus_tag=AC56_RS19325;product=ribosome-associated protein YbcJ;protein_id=WP_000190293.1;transl_table=11
NZ_JJLS01000119.1	RefSeq	gene	16469	17335	.	-	.	ID=gene-AC56_RS19320;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=AC56_RS19320;old_locus_tag=AC56_0550
NZ_JJLS01000119.1	Protein Homology	CDS	16469	17335	.	-	0	ID=cds-WP_000729155.1;Parent=gene-AC56_RS19320;Dbxref=GenBank:WP_000729155.1;Name=WP_000729155.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308618.1;locus_tag=AC56_RS19320;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_000729155.1;transl_table=11
NZ_JJLS01000119.1	RefSeq	pseudogene	17540	17959	.	-	.	ID=gene-AC56_RS0125275;Name=AC56_RS0125275;end_range=17959,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0125275;old_locus_tag=AC56_0551;partial=true;pseudo=true
NZ_JJLS01000119.1	Protein Homology	CDS	17540	17959	.	-	0	ID=cds-AC56_RS0125275;Parent=gene-AC56_RS0125275;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=17959,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS0125275;partial=true;product=IS5-like element IS903B family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000120.1 1 7355
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000120.1	RefSeq	region	1	7355	.	+	.	ID=NZ_JJLS01000120.1:1..7355;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000120.1	RefSeq	gene	1	488	.	-	.	ID=gene-AC56_RS19315;Name=AC56_RS19315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS19315;old_locus_tag=AC56_0552;partial=true;start_range=.,1
NZ_JJLS01000120.1	Protein Homology	CDS	1	488	.	-	0	ID=cds-WP_113706236.1;Parent=gene-AC56_RS19315;Dbxref=GenBank:WP_113706236.1;Name=WP_113706236.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS19315;partial=true;product=IS5 family transposase;protein_id=WP_113706236.1;start_range=.,1;transl_table=11
NZ_JJLS01000120.1	RefSeq	pseudogene	509	892	.	+	.	ID=gene-AC56_RS19310;Name=AC56_RS19310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS19310;old_locus_tag=AC56_0553;partial=true;pseudo=true;start_range=.,509
NZ_JJLS01000120.1	Protein Homology	CDS	509	892	.	+	0	ID=cds-AC56_RS19310;Parent=gene-AC56_RS19310;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308622.2;locus_tag=AC56_RS19310;partial=true;product=fimbrial protein;pseudo=true;start_range=.,509;transl_table=11
NZ_JJLS01000120.1	RefSeq	gene	903	1418	.	+	.	ID=gene-AC56_RS0125280;Name=sfmF;gbkey=Gene;gene=sfmF;gene_biotype=protein_coding;locus_tag=AC56_RS0125280
NZ_JJLS01000120.1	Protein Homology	CDS	903	1418	.	+	0	ID=cds-WP_001255226.1;Parent=gene-AC56_RS0125280;Dbxref=GenBank:WP_001255226.1;Name=WP_001255226.1;gbkey=CDS;gene=sfmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415067.1;locus_tag=AC56_RS0125280;product=fimbria assembly protein;protein_id=WP_001255226.1;transl_table=11
NZ_JJLS01000120.1	RefSeq	gene	1421	2053	.	-	.	ID=gene-AC56_RS19305;Name=fimZ;gbkey=Gene;gene=fimZ;gene_biotype=protein_coding;locus_tag=AC56_RS19305;old_locus_tag=AC56_0555
NZ_JJLS01000120.1	Protein Homology	CDS	1421	2053	.	-	0	ID=cds-WP_000805422.1;Parent=gene-AC56_RS19305;Dbxref=GenBank:WP_000805422.1;Name=WP_000805422.1;gbkey=CDS;gene=fimZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308624.1;locus_tag=AC56_RS19305;product=fimbria biosynthesis transcriptional regulator FimZ;protein_id=WP_000805422.1;transl_table=11
NZ_JJLS01000120.1	RefSeq	gene	2296	2372	.	+	.	ID=gene-AC56_RS19300;Name=AC56_RS19300;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS19300;old_locus_tag=AC56_0556
NZ_JJLS01000120.1	tRNAscan-SE	tRNA	2296	2372	.	+	.	ID=rna-AC56_RS19300;Parent=gene-AC56_RS19300;anticodon=(pos:2330..2332);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS19300;product=tRNA-Arg
NZ_JJLS01000120.1	tRNAscan-SE	exon	2296	2372	.	+	.	ID=exon-AC56_RS19300-1;Parent=rna-AC56_RS19300;anticodon=(pos:2330..2332);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS19300;product=tRNA-Arg
NZ_JJLS01000120.1	RefSeq	gene	2418	3179	.	-	.	ID=gene-AC56_RS19295;Name=envY;gbkey=Gene;gene=envY;gene_biotype=protein_coding;locus_tag=AC56_RS19295;old_locus_tag=AC56_0557
NZ_JJLS01000120.1	Protein Homology	CDS	2418	3179	.	-	0	ID=cds-WP_032277959.1;Parent=gene-AC56_RS19295;Dbxref=GenBank:WP_032277959.1;Name=WP_032277959.1;gbkey=CDS;gene=envY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308625.1;locus_tag=AC56_RS19295;product=DNA-binding transcriptional regulator EnvY;protein_id=WP_032277959.1;transl_table=11
NZ_JJLS01000120.1	RefSeq	gene	3362	4252	.	-	.	ID=gene-AC56_RS19290;Name=ybcH;gbkey=Gene;gene=ybcH;gene_biotype=protein_coding;locus_tag=AC56_RS19290;old_locus_tag=AC56_0558
NZ_JJLS01000120.1	Protein Homology	CDS	3362	4252	.	-	0	ID=cds-WP_032277960.1;Parent=gene-AC56_RS19290;Dbxref=GenBank:WP_032277960.1;Name=WP_032277960.1;gbkey=CDS;gene=ybcH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706415.1;locus_tag=AC56_RS19290;product=DUF4434 family protein;protein_id=WP_032277960.1;transl_table=11
NZ_JJLS01000120.1	RefSeq	pseudogene	4253	6649	.	-	.	ID=gene-AC56_RS19285;Name=nrfB;gbkey=Gene;gene=nrfB;gene_biotype=pseudogene;locus_tag=AC56_RS19285;old_locus_tag=AC56_0559;pseudo=true
NZ_JJLS01000120.1	Protein Homology	CDS	4253	6649	.	-	0	ID=cds-AC56_RS19285;Parent=gene-AC56_RS19285;Note=internal stop;gbkey=CDS;gene=nrfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008461437.1;locus_tag=AC56_RS19285;product=cyclic di-3'%2C5'-guanylate-activated glycosyltransferase NrfB;pseudo=true;transl_table=11
NZ_JJLS01000120.1	RefSeq	gene	6920	7355	.	-	.	ID=gene-AC56_RS19280;Name=AC56_RS19280;end_range=7355,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS19280;old_locus_tag=AC56_0561;partial=true
NZ_JJLS01000120.1	Protein Homology	CDS	6920	7355	.	-	1	ID=cds-WP_032282563.1;Parent=gene-AC56_RS19280;Dbxref=GenBank:WP_032282563.1;Name=WP_032282563.1;Ontology_term=GO:0004803;end_range=7355,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AC56_RS19280;partial=true;product=ISAs1 family transposase;protein_id=WP_032282563.1;transl_table=11
##sequence-region NZ_JJLS01000121.1 1 16074
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000121.1	RefSeq	region	1	16074	.	+	.	ID=NZ_JJLS01000121.1:1..16074;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000121.1	RefSeq	pseudogene	1	474	.	+	.	ID=gene-AC56_RS19275;Name=AC56_RS19275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS19275;old_locus_tag=AC56_0562;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000121.1	Protein Homology	CDS	1	474	.	+	1	ID=cds-AC56_RS19275;Parent=gene-AC56_RS19275;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS19275;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000121.1	RefSeq	gene	991	2439	.	-	.	ID=gene-AC56_RS19270;Name=cusS;gbkey=Gene;gene=cusS;gene_biotype=protein_coding;locus_tag=AC56_RS19270;old_locus_tag=AC56_0563
NZ_JJLS01000121.1	Protein Homology	CDS	991	2439	.	-	0	ID=cds-WP_000253805.1;Parent=gene-AC56_RS19270;Dbxref=GenBank:WP_000253805.1;Name=WP_000253805.1;gbkey=CDS;gene=cusS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739168.1;locus_tag=AC56_RS19270;product=Cu(+)/Ag(+) sensor histidine kinase CusS;protein_id=WP_000253805.1;transl_table=11
NZ_JJLS01000121.1	RefSeq	gene	2429	3112	.	-	.	ID=gene-AC56_RS19265;Name=cusR;gbkey=Gene;gene=cusR;gene_biotype=protein_coding;locus_tag=AC56_RS19265;old_locus_tag=AC56_0564
NZ_JJLS01000121.1	Protein Homology	CDS	2429	3112	.	-	0	ID=cds-WP_000770953.1;Parent=gene-AC56_RS19265;Dbxref=GenBank:WP_000770953.1;Name=WP_000770953.1;gbkey=CDS;gene=cusR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308636.1;locus_tag=AC56_RS19265;product=copper response regulator transcription factor CusR;protein_id=WP_000770953.1;transl_table=11
NZ_JJLS01000121.1	RefSeq	gene	3269	4651	.	+	.	ID=gene-AC56_RS19260;Name=cusC;gbkey=Gene;gene=cusC;gene_biotype=protein_coding;locus_tag=AC56_RS19260;old_locus_tag=AC56_0565
NZ_JJLS01000121.1	Protein Homology	CDS	3269	4651	.	+	0	ID=cds-WP_032282564.1;Parent=gene-AC56_RS19260;Dbxref=GenBank:WP_032282564.1;Name=WP_032282564.1;gbkey=CDS;gene=cusC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308637.1;locus_tag=AC56_RS19260;product=Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC;protein_id=WP_032282564.1;transl_table=11
NZ_JJLS01000121.1	RefSeq	gene	4675	5007	.	+	.	ID=gene-AC56_RS19255;Name=cusF;gbkey=Gene;gene=cusF;gene_biotype=protein_coding;locus_tag=AC56_RS19255;old_locus_tag=AC56_0566
NZ_JJLS01000121.1	Protein Homology	CDS	4675	5007	.	+	0	ID=cds-WP_000709865.1;Parent=gene-AC56_RS19255;Dbxref=GenBank:WP_000709865.1;Name=WP_000709865.1;gbkey=CDS;gene=cusF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415105.1;locus_tag=AC56_RS19255;product=Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone CusF;protein_id=WP_000709865.1;transl_table=11
NZ_JJLS01000121.1	RefSeq	gene	5023	6246	.	+	.	ID=gene-AC56_RS19250;Name=cusB;gbkey=Gene;gene=cusB;gene_biotype=protein_coding;locus_tag=AC56_RS19250;old_locus_tag=AC56_0567
NZ_JJLS01000121.1	Protein Homology	CDS	5023	6246	.	+	0	ID=cds-WP_000717157.1;Parent=gene-AC56_RS19250;Dbxref=GenBank:WP_000717157.1;Name=WP_000717157.1;gbkey=CDS;gene=cusB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415106.1;locus_tag=AC56_RS19250;product=Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit CusB;protein_id=WP_000717157.1;transl_table=11
NZ_JJLS01000121.1	RefSeq	gene	6258	9401	.	+	.	ID=gene-AC56_RS19245;Name=cusA;gbkey=Gene;gene=cusA;gene_biotype=protein_coding;locus_tag=AC56_RS19245;old_locus_tag=AC56_0568
NZ_JJLS01000121.1	Protein Homology	CDS	6258	9401	.	+	0	ID=cds-WP_001468184.1;Parent=gene-AC56_RS19245;Dbxref=GenBank:WP_001468184.1;Name=WP_001468184.1;gbkey=CDS;gene=cusA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415107.1;locus_tag=AC56_RS19245;product=Cu(+)/Ag(+) efflux RND transporter permease subunit CusA;protein_id=WP_001468184.1;transl_table=11
NZ_JJLS01000121.1	RefSeq	gene	9503	10879	.	+	.	ID=gene-AC56_RS19240;Name=pheP;gbkey=Gene;gene=pheP;gene_biotype=protein_coding;locus_tag=AC56_RS19240;old_locus_tag=AC56_0569
NZ_JJLS01000121.1	Protein Homology	CDS	9503	10879	.	+	0	ID=cds-WP_000786320.1;Parent=gene-AC56_RS19240;Dbxref=GenBank:WP_000786320.1;Name=WP_000786320.1;Ontology_term=GO:0006865;gbkey=CDS;gene=pheP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415108.1;locus_tag=AC56_RS19240;product=phenylalanine transporter;protein_id=WP_000786320.1;transl_table=11
NZ_JJLS01000121.1	RefSeq	gene	10947	12194	.	-	.	ID=gene-AC56_RS19235;Name=ybdG;gbkey=Gene;gene=ybdG;gene_biotype=protein_coding;locus_tag=AC56_RS19235;old_locus_tag=AC56_0570
NZ_JJLS01000121.1	Protein Homology	CDS	10947	12194	.	-	0	ID=cds-WP_001153148.1;Parent=gene-AC56_RS19235;Dbxref=GenBank:WP_001153148.1;Name=WP_001153148.1;gbkey=CDS;gene=ybdG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415109.1;locus_tag=AC56_RS19235;product=mechanosensitive ion channel YbdG;protein_id=WP_001153148.1;transl_table=11
NZ_JJLS01000121.1	RefSeq	gene	12302	12955	.	-	.	ID=gene-AC56_RS19230;Name=nfsB;gbkey=Gene;gene=nfsB;gene_biotype=protein_coding;locus_tag=AC56_RS19230;old_locus_tag=AC56_0571
NZ_JJLS01000121.1	Protein Homology	CDS	12302	12955	.	-	0	ID=cds-WP_000351464.1;Parent=gene-AC56_RS19230;Dbxref=GenBank:WP_000351464.1;Name=WP_000351464.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsB;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308643.1;locus_tag=AC56_RS19230;product=oxygen-insensitive NAD(P)H nitroreductase;protein_id=WP_000351464.1;transl_table=11
NZ_JJLS01000121.1	RefSeq	gene	13049	13417	.	-	.	ID=gene-AC56_RS19225;Name=AC56_RS19225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS19225;old_locus_tag=AC56_0572
NZ_JJLS01000121.1	Protein Homology	CDS	13049	13417	.	-	0	ID=cds-WP_000360951.1;Parent=gene-AC56_RS19225;Dbxref=GenBank:WP_000360951.1;Name=WP_000360951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308644.1;locus_tag=AC56_RS19225;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000360951.1;transl_table=11
NZ_JJLS01000121.1	RefSeq	gene	13500	13730	.	-	.	ID=gene-AC56_RS19220;Name=AC56_RS19220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS19220;old_locus_tag=AC56_0573
NZ_JJLS01000121.1	Protein Homology	CDS	13500	13730	.	-	0	ID=cds-WP_032277968.1;Parent=gene-AC56_RS19220;Dbxref=GenBank:WP_032277968.1;Name=WP_032277968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308645.1;locus_tag=AC56_RS19220;product=DUF1158 domain-containing protein;protein_id=WP_032277968.1;transl_table=11
NZ_JJLS01000121.1	RefSeq	gene	13796	14914	.	-	.	ID=gene-AC56_RS19215;Name=AC56_RS19215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS19215;old_locus_tag=AC56_0574
NZ_JJLS01000121.1	Protein Homology	CDS	13796	14914	.	-	0	ID=cds-WP_001130654.1;Parent=gene-AC56_RS19215;Dbxref=GenBank:WP_001130654.1;Name=WP_001130654.1;Ontology_term=GO:0042398,GO:0004357;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415113.1;locus_tag=AC56_RS19215;product=YbdK family carboxylate-amine ligase;protein_id=WP_001130654.1;transl_table=11
NZ_JJLS01000121.1	RefSeq	pseudogene	15130	15398	.	-	.	ID=gene-AC56_RS33695;Name=AC56_RS33695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33695;pseudo=true
NZ_JJLS01000121.1	Protein Homology	CDS	15130	15398	.	-	0	ID=cds-AC56_RS33695;Parent=gene-AC56_RS33695;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009008364.1;locus_tag=AC56_RS33695;product=hypothetical protein;pseudo=true;transl_table=11
NZ_JJLS01000121.1	RefSeq	gene	15367	15519	.	+	.	ID=gene-AC56_RS19210;Name=hokE;gbkey=Gene;gene=hokE;gene_biotype=protein_coding;locus_tag=AC56_RS19210;old_locus_tag=AC56_0575
NZ_JJLS01000121.1	Protein Homology	CDS	15367	15519	.	+	0	ID=cds-WP_000956455.1;Parent=gene-AC56_RS19210;Dbxref=GenBank:WP_000956455.1;Name=WP_000956455.1;gbkey=CDS;gene=hokE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025295.1;locus_tag=AC56_RS19210;product=type I toxin-antitoxin system toxin HokE;protein_id=WP_000956455.1;transl_table=11
NZ_JJLS01000121.1	RefSeq	pseudogene	15596	16074	.	+	.	ID=gene-AC56_RS19205;Name=AC56_RS19205;end_range=16074,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS19205;old_locus_tag=AC56_0576;partial=true;pseudo=true
NZ_JJLS01000121.1	Protein Homology	CDS	15596	16074	.	+	0	ID=cds-AC56_RS19205;Parent=gene-AC56_RS19205;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=16074,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS19205;partial=true;product=IS4-like element IS186A family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000122.1 1 934
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000122.1	RefSeq	region	1	934	.	+	.	ID=NZ_JJLS01000122.1:1..934;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000122.1	RefSeq	gene	1	306	.	+	.	ID=gene-AC56_RS19200;Name=AC56_RS19200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS19200;old_locus_tag=AC56_0577;partial=true;start_range=.,1
NZ_JJLS01000122.1	Protein Homology	CDS	1	306	.	+	0	ID=cds-WP_001354229.1;Parent=gene-AC56_RS19200;Dbxref=GenBank:WP_001354229.1;Name=WP_001354229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS19200;partial=true;product=IS4 family transposase;protein_id=WP_001354229.1;start_range=.,1;transl_table=11
NZ_JJLS01000122.1	RefSeq	pseudogene	544	934	.	+	.	ID=gene-AC56_RS19195;Name=AC56_RS19195;end_range=934,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS19195;old_locus_tag=AC56_0578;partial=true;pseudo=true
NZ_JJLS01000122.1	Protein Homology	CDS	544	934	.	+	0	ID=cds-AC56_RS19195;Parent=gene-AC56_RS19195;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=934,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS19195;partial=true;product=IS4 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000123.1 1 18032
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000123.1	RefSeq	region	1	18032	.	+	.	ID=NZ_JJLS01000123.1:1..18032;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000123.1	RefSeq	pseudogene	1	350	.	-	.	ID=gene-AC56_RS0125290;Name=AC56_RS0125290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0125290;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000123.1	Protein Homology	CDS	1	350	.	-	0	ID=cds-AC56_RS0125290;Parent=gene-AC56_RS0125290;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS0125290;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000123.1	RefSeq	pseudogene	407	955	.	+	.	ID=gene-AC56_RS19190;Name=wzz(fepE);gbkey=Gene;gene=wzz(fepE);gene_biotype=pseudogene;locus_tag=AC56_RS19190;old_locus_tag=AC56_0580;partial=true;pseudo=true;start_range=.,407
NZ_JJLS01000123.1	Protein Homology	CDS	407	955	.	+	0	ID=cds-AC56_RS19190;Parent=gene-AC56_RS19190;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzz(fepE);go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308653.1;locus_tag=AC56_RS19190;partial=true;product=LPS O-antigen length regulator Wzz(fepE);pseudo=true;start_range=.,407;transl_table=11
NZ_JJLS01000123.1	RefSeq	gene	952	1767	.	-	.	ID=gene-AC56_RS19185;Name=fepC;gbkey=Gene;gene=fepC;gene_biotype=protein_coding;locus_tag=AC56_RS19185;old_locus_tag=AC56_0581
NZ_JJLS01000123.1	Protein Homology	CDS	952	1767	.	-	0	ID=cds-WP_000140647.1;Parent=gene-AC56_RS19185;Dbxref=GenBank:WP_000140647.1;Name=WP_000140647.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fepC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415120.1;locus_tag=AC56_RS19185;product=iron-enterobactin ABC transporter ATP-binding protein;protein_id=WP_000140647.1;transl_table=11
NZ_JJLS01000123.1	RefSeq	gene	1764	2756	.	-	.	ID=gene-AC56_RS19180;Name=fepG;gbkey=Gene;gene=fepG;gene_biotype=protein_coding;locus_tag=AC56_RS19180;old_locus_tag=AC56_0582
NZ_JJLS01000123.1	Protein Homology	CDS	1764	2756	.	-	0	ID=cds-WP_000640979.1;Parent=gene-AC56_RS19180;Dbxref=GenBank:WP_000640979.1;Name=WP_000640979.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fepG;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415121.1;locus_tag=AC56_RS19180;product=iron-enterobactin ABC transporter permease;protein_id=WP_000640979.1;transl_table=11
NZ_JJLS01000123.1	RefSeq	gene	2753	3757	.	-	.	ID=gene-AC56_RS19175;Name=fepD;gbkey=Gene;gene=fepD;gene_biotype=protein_coding;locus_tag=AC56_RS19175;old_locus_tag=AC56_0583
NZ_JJLS01000123.1	Protein Homology	CDS	2753	3757	.	-	0	ID=cds-WP_001295314.1;Parent=gene-AC56_RS19175;Dbxref=GenBank:WP_001295314.1;Name=WP_001295314.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=fepD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308656.1;locus_tag=AC56_RS19175;product=Fe(3+)-siderophore ABC transporter permease;protein_id=WP_001295314.1;transl_table=11
NZ_JJLS01000123.1	RefSeq	gene	3868	5118	.	+	.	ID=gene-AC56_RS19170;Name=entS;gbkey=Gene;gene=entS;gene_biotype=protein_coding;locus_tag=AC56_RS19170;old_locus_tag=AC56_0584
NZ_JJLS01000123.1	Protein Homology	CDS	3868	5118	.	+	0	ID=cds-WP_032177020.1;Parent=gene-AC56_RS19170;Dbxref=GenBank:WP_032177020.1;Name=WP_032177020.1;Ontology_term=GO:0042930,GO:0042931;gbkey=CDS;gene=entS;go_function=enterobactin transmembrane transporter activity|0042931||IEA;go_process=enterobactin transport|0042930||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308657.1;locus_tag=AC56_RS19170;product=enterobactin transporter EntS;protein_id=WP_032177020.1;transl_table=11
NZ_JJLS01000123.1	RefSeq	gene	5122	6078	.	-	.	ID=gene-AC56_RS19165;Name=fepB;gbkey=Gene;gene=fepB;gene_biotype=protein_coding;locus_tag=AC56_RS19165;old_locus_tag=AC56_0585
NZ_JJLS01000123.1	Protein Homology	CDS	5122	6078	.	-	0	ID=cds-WP_001234327.1;Parent=gene-AC56_RS19165;Dbxref=GenBank:WP_001234327.1;Name=WP_001234327.1;gbkey=CDS;gene=fepB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415124.1;locus_tag=AC56_RS19165;product=Fe2+-enterobactin ABC transporter substrate-binding protein;protein_id=WP_001234327.1;transl_table=11
NZ_JJLS01000123.1	RefSeq	gene	6267	7442	.	+	.	ID=gene-AC56_RS19160;Name=entC;gbkey=Gene;gene=entC;gene_biotype=protein_coding;locus_tag=AC56_RS19160;old_locus_tag=AC56_0586
NZ_JJLS01000123.1	Protein Homology	CDS	6267	7442	.	+	0	ID=cds-WP_032277975.1;Parent=gene-AC56_RS19160;Dbxref=GenBank:WP_032277975.1;Name=WP_032277975.1;Ontology_term=GO:0008909;gbkey=CDS;gene=entC;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308659.1;locus_tag=AC56_RS19160;product=isochorismate synthase EntC;protein_id=WP_032277975.1;transl_table=11
NZ_JJLS01000123.1	RefSeq	gene	7452	9062	.	+	.	ID=gene-AC56_RS19155;Name=entE;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=AC56_RS19155;old_locus_tag=AC56_0587
NZ_JJLS01000123.1	Protein Homology	CDS	7452	9062	.	+	0	ID=cds-WP_000026804.1;Parent=gene-AC56_RS19155;Dbxref=GenBank:WP_000026804.1;Name=WP_000026804.1;gbkey=CDS;gene=entE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415126.1;locus_tag=AC56_RS19155;product=(2%2C3-dihydroxybenzoyl)adenylate synthase EntE;protein_id=WP_000026804.1;transl_table=11
NZ_JJLS01000123.1	RefSeq	gene	9076	9933	.	+	.	ID=gene-AC56_RS19150;Name=entB;gbkey=Gene;gene=entB;gene_biotype=protein_coding;locus_tag=AC56_RS19150;old_locus_tag=AC56_0588
NZ_JJLS01000123.1	Protein Homology	CDS	9076	9933	.	+	0	ID=cds-WP_001007142.1;Parent=gene-AC56_RS19150;Dbxref=GenBank:WP_001007142.1;Name=WP_001007142.1;gbkey=CDS;gene=entB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308661.1;locus_tag=AC56_RS19150;product=enterobactin biosynthesis bifunctional isochorismatase/aryl carrier protein EntB;protein_id=WP_001007142.1;transl_table=11
NZ_JJLS01000123.1	RefSeq	gene	9933	10679	.	+	.	ID=gene-AC56_RS19145;Name=entA;gbkey=Gene;gene=entA;gene_biotype=protein_coding;locus_tag=AC56_RS19145;old_locus_tag=AC56_0589
NZ_JJLS01000123.1	Protein Homology	CDS	9933	10679	.	+	0	ID=cds-WP_000347634.1;Parent=gene-AC56_RS19145;Dbxref=GenBank:WP_000347634.1;Name=WP_000347634.1;gbkey=CDS;gene=entA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308662.1;locus_tag=AC56_RS19145;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase EntA;protein_id=WP_000347634.1;transl_table=11
NZ_JJLS01000123.1	RefSeq	gene	10682	11095	.	+	.	ID=gene-AC56_RS19140;Name=entH;gbkey=Gene;gene=entH;gene_biotype=protein_coding;locus_tag=AC56_RS19140;old_locus_tag=AC56_0590
NZ_JJLS01000123.1	Protein Homology	CDS	10682	11095	.	+	0	ID=cds-WP_000637953.1;Parent=gene-AC56_RS19140;Dbxref=GenBank:WP_000637953.1;Name=WP_000637953.1;gbkey=CDS;gene=entH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415129.1;locus_tag=AC56_RS19140;product=proofreading thioesterase EntH;protein_id=WP_000637953.1;transl_table=11
NZ_JJLS01000123.1	RefSeq	gene	11276	13381	.	+	.	ID=gene-AC56_RS19135;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=AC56_RS19135;old_locus_tag=AC56_0591
NZ_JJLS01000123.1	Protein Homology	CDS	11276	13381	.	+	0	ID=cds-WP_001043134.1;Parent=gene-AC56_RS19135;Dbxref=GenBank:WP_001043134.1;Name=WP_001043134.1;Ontology_term=GO:0009267;gbkey=CDS;gene=cstA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415130.1;locus_tag=AC56_RS19135;product=pyruvate/proton symporter CstA;protein_id=WP_001043134.1;transl_table=11
NZ_JJLS01000123.1	RefSeq	gene	13563	13760	.	+	.	ID=gene-AC56_RS19130;Name=ybdD;gbkey=Gene;gene=ybdD;gene_biotype=protein_coding;locus_tag=AC56_RS19130;old_locus_tag=AC56_0592
NZ_JJLS01000123.1	Protein Homology	CDS	13563	13760	.	+	0	ID=cds-WP_000460431.1;Parent=gene-AC56_RS19130;Dbxref=GenBank:WP_000460431.1;Name=WP_000460431.1;gbkey=CDS;gene=ybdD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904950.1;locus_tag=AC56_RS19130;product=YbdD/YjiX family protein;protein_id=WP_000460431.1;transl_table=11
NZ_JJLS01000123.1	RefSeq	gene	13770	14858	.	-	.	ID=gene-AC56_RS19125;Name=hcxA;gbkey=Gene;gene=hcxA;gene_biotype=protein_coding;locus_tag=AC56_RS19125;old_locus_tag=AC56_0593
NZ_JJLS01000123.1	Protein Homology	CDS	13770	14858	.	-	0	ID=cds-WP_001120460.1;Parent=gene-AC56_RS19125;Dbxref=GenBank:WP_001120460.1;Name=WP_001120460.1;gbkey=CDS;gene=hcxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308665.1;locus_tag=AC56_RS19125;product=hydroxycarboxylate dehydrogenase HcxA;protein_id=WP_001120460.1;transl_table=11
NZ_JJLS01000123.1	RefSeq	gene	14967	16127	.	+	.	ID=gene-AC56_RS19120;Name=ybdL;gbkey=Gene;gene=ybdL;gene_biotype=protein_coding;locus_tag=AC56_RS19120;old_locus_tag=AC56_0594
NZ_JJLS01000123.1	Protein Homology	CDS	14967	16127	.	+	0	ID=cds-WP_000183907.1;Parent=gene-AC56_RS19120;Dbxref=GenBank:WP_000183907.1;Name=WP_000183907.1;gbkey=CDS;gene=ybdL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415133.1;locus_tag=AC56_RS19120;product=methionine-oxo-acid transaminase;protein_id=WP_000183907.1;transl_table=11
NZ_JJLS01000123.1	RefSeq	pseudogene	16128	16756	.	-	.	ID=gene-AC56_RS28855;Name=ybdM;gbkey=Gene;gene=ybdM;gene_biotype=pseudogene;locus_tag=AC56_RS28855;pseudo=true
NZ_JJLS01000123.1	Protein Homology	CDS	16128	16756	.	-	0	ID=cds-AC56_RS28855;Parent=gene-AC56_RS28855;Note=frameshifted;Ontology_term=GO:0071453,GO:0003677;gbkey=CDS;gene=ybdM;go_function=DNA binding|0003677||IEA;go_process=cellular response to oxygen levels|0071453||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415134.1;locus_tag=AC56_RS28855;product=IbrB-like domain-containing protein;pseudo=true;transl_table=11
NZ_JJLS01000123.1	RefSeq	pseudogene	16729	17397	.	-	.	ID=gene-AC56_RS0125295;Name=AC56_RS0125295;end_range=17397,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0125295;old_locus_tag=AC56_0597;partial=true;pseudo=true
NZ_JJLS01000123.1	Protein Homology	CDS	16729	17397	.	-	0	ID=cds-AC56_RS0125295;Parent=gene-AC56_RS0125295;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=17397,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415135.1;locus_tag=AC56_RS0125295;partial=true;product=DUF3440 domain-containing protein;pseudo=true;transl_table=11
NZ_JJLS01000123.1	RefSeq	pseudogene	17453	18032	.	+	.	ID=gene-AC56_RS19105;Name=AC56_RS19105;end_range=18032,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS19105;old_locus_tag=AC56_0598;partial=true;pseudo=true
NZ_JJLS01000123.1	Protein Homology	CDS	17453	18032	.	+	0	ID=cds-AC56_RS19105;Parent=gene-AC56_RS19105;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;end_range=18032,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=AC56_RS19105;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000124.1 1 50796
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000124.1	RefSeq	region	1	50796	.	+	.	ID=NZ_JJLS01000124.1:1..50796;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000124.1	RefSeq	pseudogene	1	135	.	-	.	ID=gene-AC56_RS32655;Name=AC56_RS32655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS32655;old_locus_tag=AC56_0599;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000124.1	Protein Homology	CDS	1	135	.	-	0	ID=cds-AC56_RS32655;Parent=gene-AC56_RS32655;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS32655;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000124.1	RefSeq	pseudogene	167	457	.	-	.	ID=gene-AC56_RS19095;Name=AC56_RS19095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS19095;old_locus_tag=AC56_0600;partial=true;pseudo=true;start_range=.,167
NZ_JJLS01000124.1	Protein Homology	CDS	167	457	.	-	0	ID=cds-AC56_RS19095;Parent=gene-AC56_RS19095;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0008410;gbkey=CDS;go_function=CoA-transferase activity|0008410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310428.1;locus_tag=AC56_RS19095;partial=true;product=CoA-transferase;pseudo=true;start_range=.,167;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	600	1358	.	-	.	ID=gene-AC56_RS19090;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=AC56_RS19090;old_locus_tag=AC56_0602
NZ_JJLS01000124.1	Protein Homology	CDS	600	1358	.	-	0	ID=cds-WP_016242173.1-2;Parent=gene-AC56_RS19090;Dbxref=GenBank:WP_016242173.1;Name=WP_016242173.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416208.1;locus_tag=AC56_RS19090;product=type I 3-dehydroquinate dehydratase;protein_id=WP_016242173.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	1389	2255	.	-	.	ID=gene-AC56_RS19085;Name=ydiB;gbkey=Gene;gene=ydiB;gene_biotype=protein_coding;locus_tag=AC56_RS19085;old_locus_tag=AC56_0603
NZ_JJLS01000124.1	Protein Homology	CDS	1389	2255	.	-	0	ID=cds-WP_032278339.1-2;Parent=gene-AC56_RS19085;Dbxref=GenBank:WP_032278339.1;Name=WP_032278339.1;gbkey=CDS;gene=ydiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416207.1;locus_tag=AC56_RS19085;product=quinate/shikimate dehydrogenase;protein_id=WP_032278339.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	2267	3532	.	-	.	ID=gene-AC56_RS19080;Name=AC56_RS19080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS19080;old_locus_tag=AC56_0604
NZ_JJLS01000124.1	Protein Homology	CDS	2267	3532	.	-	0	ID=cds-WP_001297389.1-2;Parent=gene-AC56_RS19080;Dbxref=GenBank:WP_001297389.1;Name=WP_001297389.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310425.2;locus_tag=AC56_RS19080;product=MFS transporter;protein_id=WP_001297389.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	pseudogene	3759	4310	.	-	.	ID=gene-AC56_RS19075;Name=AC56_RS19075;end_range=4310,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS19075;old_locus_tag=AC56_0605;partial=true;pseudo=true
NZ_JJLS01000124.1	Protein Homology	CDS	3759	4310	.	-	0	ID=cds-AC56_RS19075;Parent=gene-AC56_RS19075;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857;end_range=4310,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416205.1;locus_tag=AC56_RS19075;partial=true;product=MFS transporter;pseudo=true;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	4366	5063	.	+	.	ID=gene-AC56_RS19070;Name=AC56_RS19070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS19070;old_locus_tag=AC56_0606
NZ_JJLS01000124.1	Protein Homology	CDS	4366	4615	.	+	0	ID=cds-WP_236165453.1-2;Parent=gene-AC56_RS19070;Dbxref=GenBank:WP_236165453.1;Name=WP_236165453.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558270.1;locus_tag=AC56_RS19070;product=IS1 family transposase;protein_id=WP_236165453.1;transl_table=11
NZ_JJLS01000124.1	Protein Homology	CDS	4615	5063	.	+	2	ID=cds-WP_236165453.1-2;Parent=gene-AC56_RS19070;Dbxref=GenBank:WP_236165453.1;Name=WP_236165453.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558270.1;locus_tag=AC56_RS19070;product=IS1 family transposase;protein_id=WP_236165453.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	5238	5984	.	-	.	ID=gene-AC56_RS19065;Name=dsbG;gbkey=Gene;gene=dsbG;gene_biotype=protein_coding;locus_tag=AC56_RS19065;old_locus_tag=AC56_0607
NZ_JJLS01000124.1	Protein Homology	CDS	5238	5984	.	-	0	ID=cds-WP_000913829.1;Parent=gene-AC56_RS19065;Dbxref=GenBank:WP_000913829.1;Name=WP_000913829.1;gbkey=CDS;gene=dsbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415137.2;locus_tag=AC56_RS19065;product=thiol:disulfide interchange protein DsbG;protein_id=WP_000913829.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	6356	6919	.	+	.	ID=gene-AC56_RS19060;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=AC56_RS19060;old_locus_tag=AC56_0608
NZ_JJLS01000124.1	Protein Homology	CDS	6356	6919	.	+	0	ID=cds-WP_000052796.1;Parent=gene-AC56_RS19060;Dbxref=GenBank:WP_000052796.1;Name=WP_000052796.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1;locus_tag=AC56_RS19060;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_000052796.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	7164	8729	.	+	.	ID=gene-AC56_RS19055;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=AC56_RS19055;old_locus_tag=AC56_0610
NZ_JJLS01000124.1	Protein Homology	CDS	7164	8729	.	+	0	ID=cds-WP_000887629.1;Parent=gene-AC56_RS19055;Dbxref=GenBank:WP_000887629.1;Name=WP_000887629.1;Ontology_term=GO:0000302,GO:0008785,GO:0050660,GO:0051287;gbkey=CDS;gene=ahpF;go_function=alkyl hydroperoxide reductase activity|0008785||IEA,flavin adenine dinucleotide binding|0050660||IEA,NAD binding|0051287||IEA;go_process=response to reactive oxygen species|0000302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455864.1;locus_tag=AC56_RS19055;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_000887629.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	8850	9278	.	-	.	ID=gene-AC56_RS19050;Name=uspG;gbkey=Gene;gene=uspG;gene_biotype=protein_coding;locus_tag=AC56_RS19050;old_locus_tag=AC56_0611
NZ_JJLS01000124.1	Protein Homology	CDS	8850	9278	.	-	0	ID=cds-WP_000278509.1;Parent=gene-AC56_RS19050;Dbxref=GenBank:WP_000278509.1;Name=WP_000278509.1;gbkey=CDS;gene=uspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415140.1;locus_tag=AC56_RS19050;product=universal stress protein UspG;protein_id=WP_000278509.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	9499	10737	.	+	.	ID=gene-AC56_RS19045;Name=ybdR;gbkey=Gene;gene=ybdR;gene_biotype=protein_coding;locus_tag=AC56_RS19045;old_locus_tag=AC56_0612
NZ_JJLS01000124.1	Protein Homology	CDS	9499	10737	.	+	0	ID=cds-WP_032277980.1;Parent=gene-AC56_RS19045;Dbxref=GenBank:WP_032277980.1;Name=WP_032277980.1;Ontology_term=GO:0008270,GO:0016616,GO:0030554;gbkey=CDS;gene=ybdR;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308674.1;locus_tag=AC56_RS19045;product=zinc-dependent alcohol dehydrogenase;protein_id=WP_032277980.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	10741	10830	.	-	.	ID=gene-AC56_RS33535;Name=yldA;gbkey=Gene;gene=yldA;gene_biotype=protein_coding;locus_tag=AC56_RS33535;old_locus_tag=AC56_0613
NZ_JJLS01000124.1	Protein Homology	CDS	10741	10830	.	-	0	ID=cds-WP_000796528.1;Parent=gene-AC56_RS33535;Dbxref=GenBank:WP_000796528.1;Name=WP_000796528.1;gbkey=CDS;gene=yldA;inference=COORDINATES: protein motif:HMM:NF041476.1;locus_tag=AC56_RS33535;product=small membrane protein YldA;protein_id=WP_000796528.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	10968	11378	.	-	.	ID=gene-AC56_RS19035;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;locus_tag=AC56_RS19035;old_locus_tag=AC56_0614
NZ_JJLS01000124.1	Protein Homology	CDS	10968	11378	.	-	0	ID=cds-WP_000089731.1;Parent=gene-AC56_RS19035;Dbxref=GenBank:WP_000089731.1;Name=WP_000089731.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=rnk;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308676.1;locus_tag=AC56_RS19035;product=nucleoside diphosphate kinase regulator;protein_id=WP_000089731.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	11607	12413	.	-	.	ID=gene-AC56_RS19030;Name=rna;gbkey=Gene;gene=rna;gene_biotype=protein_coding;locus_tag=AC56_RS19030;old_locus_tag=AC56_0616
NZ_JJLS01000124.1	Protein Homology	CDS	11607	12413	.	-	0	ID=cds-WP_001295857.1;Parent=gene-AC56_RS19030;Dbxref=GenBank:WP_001295857.1;Name=WP_001295857.1;gbkey=CDS;gene=rna;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308677.1;locus_tag=AC56_RS19030;product=ribonuclease I;protein_id=WP_001295857.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	12527	13990	.	-	.	ID=gene-AC56_RS19025;Name=citT;gbkey=Gene;gene=citT;gene_biotype=protein_coding;locus_tag=AC56_RS19025;old_locus_tag=AC56_0617
NZ_JJLS01000124.1	Protein Homology	CDS	12527	13990	.	-	0	ID=cds-WP_000050323.1;Parent=gene-AC56_RS19025;Dbxref=GenBank:WP_000050323.1;Name=WP_000050323.1;gbkey=CDS;gene=citT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308678.1;locus_tag=AC56_RS19025;product=citrate/succinate antiporter CitT;protein_id=WP_000050323.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	14041	14919	.	-	.	ID=gene-AC56_RS19020;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=AC56_RS19020;old_locus_tag=AC56_0618
NZ_JJLS01000124.1	Protein Homology	CDS	14041	14919	.	-	0	ID=cds-WP_032282568.1;Parent=gene-AC56_RS19020;Dbxref=GenBank:WP_032282568.1;Name=WP_032282568.1;gbkey=CDS;gene=citG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415146.1;locus_tag=AC56_RS19020;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_032282568.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	14894	15445	.	-	.	ID=gene-AC56_RS19015;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=AC56_RS19015;old_locus_tag=AC56_0619
NZ_JJLS01000124.1	Protein Homology	CDS	14894	15445	.	-	0	ID=cds-WP_000550414.1;Parent=gene-AC56_RS19015;Dbxref=GenBank:WP_000550414.1;Name=WP_000550414.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308680.1;locus_tag=AC56_RS19015;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_000550414.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	15449	16981	.	-	.	ID=gene-AC56_RS19010;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=AC56_RS19010;old_locus_tag=AC56_0620
NZ_JJLS01000124.1	Protein Homology	CDS	15449	16981	.	-	0	ID=cds-WP_000192245.1;Parent=gene-AC56_RS19010;Dbxref=GenBank:WP_000192245.1;Name=WP_000192245.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415148.1;locus_tag=AC56_RS19010;product=citrate lyase subunit alpha;protein_id=WP_000192245.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	16992	17900	.	-	.	ID=gene-AC56_RS19005;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=AC56_RS19005;old_locus_tag=AC56_0621
NZ_JJLS01000124.1	Protein Homology	CDS	16992	17900	.	-	0	ID=cds-WP_001432639.1;Parent=gene-AC56_RS19005;Dbxref=GenBank:WP_001432639.1;Name=WP_001432639.1;Ontology_term=GO:0006084,GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citE;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=acetyl-CoA metabolic process|0006084||IEA,fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415149.4;locus_tag=AC56_RS19005;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_001432639.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	17897	18193	.	-	.	ID=gene-AC56_RS19000;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=AC56_RS19000;old_locus_tag=AC56_0622
NZ_JJLS01000124.1	Protein Homology	CDS	17897	18193	.	-	0	ID=cds-WP_000700703.1;Parent=gene-AC56_RS19000;Dbxref=GenBank:WP_000700703.1;Name=WP_000700703.1;Ontology_term=GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citD;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308683.1;locus_tag=AC56_RS19000;product=citrate lyase acyl carrier protein;protein_id=WP_000700703.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	18208	19266	.	-	.	ID=gene-AC56_RS18995;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=AC56_RS18995;old_locus_tag=AC56_0623
NZ_JJLS01000124.1	Protein Homology	CDS	18208	19266	.	-	0	ID=cds-WP_032277982.1;Parent=gene-AC56_RS18995;Dbxref=GenBank:WP_032277982.1;Name=WP_032277982.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415151.4;locus_tag=AC56_RS18995;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_032277982.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	19646	21304	.	+	.	ID=gene-AC56_RS18990;Name=dpiB;gbkey=Gene;gene=dpiB;gene_biotype=protein_coding;locus_tag=AC56_RS18990;old_locus_tag=AC56_0624
NZ_JJLS01000124.1	Protein Homology	CDS	19646	21304	.	+	0	ID=cds-WP_000939767.1;Parent=gene-AC56_RS18990;Dbxref=GenBank:WP_000939767.1;Name=WP_000939767.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=dpiB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415152.1;locus_tag=AC56_RS18990;product=sensor histidine kinase DpiB;protein_id=WP_000939767.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	21273	21953	.	+	.	ID=gene-AC56_RS18985;Name=dpiA;gbkey=Gene;gene=dpiA;gene_biotype=protein_coding;gene_synonym=citB;locus_tag=AC56_RS18985;old_locus_tag=AC56_0625
NZ_JJLS01000124.1	Protein Homology	CDS	21273	21953	.	+	0	ID=cds-WP_000126500.1;Parent=gene-AC56_RS18985;Dbxref=GenBank:WP_000126500.1;Name=WP_000126500.1;gbkey=CDS;gene=dpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308686.1;locus_tag=AC56_RS18985;product=two-component response regulator DpiA;protein_id=WP_000126500.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	21994	23379	.	-	.	ID=gene-AC56_RS18980;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=AC56_RS18980;old_locus_tag=AC56_0626
NZ_JJLS01000124.1	Protein Homology	CDS	21994	23379	.	-	0	ID=cds-WP_000955063.1;Parent=gene-AC56_RS18980;Dbxref=GenBank:WP_000955063.1;Name=WP_000955063.1;Ontology_term=GO:0015740,GO:0015556;gbkey=CDS;gene=dcuC;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308687.1;locus_tag=AC56_RS18980;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WP_000955063.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	23968	24528	.	+	.	ID=gene-AC56_RS18975;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=protein_coding;locus_tag=AC56_RS18975;old_locus_tag=AC56_0628
NZ_JJLS01000124.1	Protein Homology	CDS	23968	24528	.	+	0	ID=cds-WP_001103094.1;Parent=gene-AC56_RS18975;Dbxref=GenBank:WP_001103094.1;Name=WP_001103094.1;gbkey=CDS;gene=pagP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415155.1;locus_tag=AC56_RS18975;product=lipid IV(A) palmitoyltransferase PagP;protein_id=WP_001103094.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	24703	24912	.	+	.	ID=gene-AC56_RS18970;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=AC56_RS18970;old_locus_tag=AC56_0629
NZ_JJLS01000124.1	Protein Homology	CDS	24703	24912	.	+	0	ID=cds-WP_000034825.1;Parent=gene-AC56_RS18970;Dbxref=GenBank:WP_000034825.1;Name=WP_000034825.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308689.1;locus_tag=AC56_RS18970;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000034825.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	24966	25349	.	-	.	ID=gene-AC56_RS18965;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=AC56_RS18965;old_locus_tag=AC56_0630
NZ_JJLS01000124.1	Protein Homology	CDS	24966	25349	.	-	0	ID=cds-WP_000939749.1;Parent=gene-AC56_RS18965;Dbxref=GenBank:WP_000939749.1;Name=WP_000939749.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308690.1;locus_tag=AC56_RS18965;product=fluoride efflux transporter CrcB;protein_id=WP_000939749.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	25442	26230	.	+	.	ID=gene-AC56_RS18960;Name=AC56_RS18960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS18960;old_locus_tag=AC56_0631
NZ_JJLS01000124.1	Protein Homology	CDS	25442	26230	.	+	0	ID=cds-WP_000959109.1;Parent=gene-AC56_RS18960;Dbxref=GenBank:WP_000959109.1;Name=WP_000959109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308691.1;locus_tag=AC56_RS18960;product=deaminated glutathione amidase;protein_id=WP_000959109.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	26359	26562	.	+	.	ID=gene-AC56_RS18955;Name=tatE;gbkey=Gene;gene=tatE;gene_biotype=protein_coding;locus_tag=AC56_RS18955;old_locus_tag=AC56_0632
NZ_JJLS01000124.1	Protein Homology	CDS	26359	26562	.	+	0	ID=cds-WP_000503931.1;Parent=gene-AC56_RS18955;Dbxref=GenBank:WP_000503931.1;Name=WP_000503931.1;gbkey=CDS;gene=tatE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308692.1;locus_tag=AC56_RS18955;product=twin-arginine translocase subunit TatE;protein_id=WP_000503931.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	26663	27628	.	-	.	ID=gene-AC56_RS18950;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=AC56_RS18950;old_locus_tag=AC56_0633
NZ_JJLS01000124.1	Protein Homology	CDS	26663	27628	.	-	0	ID=cds-WP_000042632.1;Parent=gene-AC56_RS18950;Dbxref=GenBank:WP_000042632.1;Name=WP_000042632.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1;locus_tag=AC56_RS18950;product=lipoyl synthase;protein_id=WP_000042632.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	27837	28790	.	-	.	ID=gene-AC56_RS18945;Name=ybeF;gbkey=Gene;gene=ybeF;gene_biotype=protein_coding;locus_tag=AC56_RS18945;old_locus_tag=AC56_0634
NZ_JJLS01000124.1	Protein Homology	CDS	27837	28790	.	-	0	ID=cds-WP_032277983.1;Parent=gene-AC56_RS18945;Dbxref=GenBank:WP_032277983.1;Name=WP_032277983.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ybeF;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415162.4;locus_tag=AC56_RS18945;product=YbeF family transcriptional regulator;protein_id=WP_032277983.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	29049	29690	.	-	.	ID=gene-AC56_RS18940;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=AC56_RS18940;old_locus_tag=AC56_0635
NZ_JJLS01000124.1	Protein Homology	CDS	29049	29690	.	-	0	ID=cds-WP_000284027.1;Parent=gene-AC56_RS18940;Dbxref=GenBank:WP_000284027.1;Name=WP_000284027.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415163.2;locus_tag=AC56_RS18940;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_000284027.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	29791	30054	.	-	.	ID=gene-AC56_RS18935;Name=ybeD;gbkey=Gene;gene=ybeD;gene_biotype=protein_coding;locus_tag=AC56_RS18935;old_locus_tag=AC56_0636
NZ_JJLS01000124.1	Protein Homology	CDS	29791	30054	.	-	0	ID=cds-WP_000850550.1;Parent=gene-AC56_RS18935;Dbxref=GenBank:WP_000850550.1;Name=WP_000850550.1;gbkey=CDS;gene=ybeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308696.1;locus_tag=AC56_RS18935;product=DUF493 family protein YbeD;protein_id=WP_000850550.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	30165	31376	.	-	.	ID=gene-AC56_RS18930;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;locus_tag=AC56_RS18930;old_locus_tag=AC56_0637
NZ_JJLS01000124.1	Protein Homology	CDS	30165	31376	.	-	0	ID=cds-WP_001092082.1;Parent=gene-AC56_RS18930;Dbxref=GenBank:WP_001092082.1;Name=WP_001092082.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacA;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415165.1;locus_tag=AC56_RS18930;product=D-alanyl-D-alanine carboxypeptidase DacA;protein_id=WP_001092082.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	31515	32603	.	-	.	ID=gene-AC56_RS18925;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=AC56_RS18925;old_locus_tag=AC56_0638
NZ_JJLS01000124.1	Protein Homology	CDS	31515	32603	.	-	0	ID=cds-WP_032282570.1;Parent=gene-AC56_RS18925;Dbxref=GenBank:WP_032282570.1;Name=WP_032282570.1;Ontology_term=GO:0042834;gbkey=CDS;gene=rlpA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415166.1;locus_tag=AC56_RS18925;product=endolytic peptidoglycan transglycosylase RlpA;protein_id=WP_032282570.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	32614	33726	.	-	.	ID=gene-AC56_RS18920;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;gene_synonym=rodA;locus_tag=AC56_RS18920;old_locus_tag=AC56_0639
NZ_JJLS01000124.1	Protein Homology	CDS	32614	33726	.	-	0	ID=cds-WP_000131719.1;Parent=gene-AC56_RS18920;Dbxref=GenBank:WP_000131719.1;Name=WP_000131719.1;Note=rod shape-determining protein RodA;gbkey=CDS;gene=mrdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004885876.1;locus_tag=AC56_RS18920;product=peptidoglycan glycosyltransferase MrdB;protein_id=WP_000131719.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	33729	35630	.	-	.	ID=gene-AC56_RS18915;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=AC56_RS18915;old_locus_tag=AC56_0640
NZ_JJLS01000124.1	Protein Homology	CDS	33729	35630	.	-	0	ID=cds-WP_000776191.1;Parent=gene-AC56_RS18915;Dbxref=GenBank:WP_000776191.1;Name=WP_000776191.1;Ontology_term=GO:0009252,GO:0008658,GO:0009002,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308700.1;locus_tag=AC56_RS18915;product=peptidoglycan DD-transpeptidase MrdA;protein_id=WP_000776191.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	35661	36128	.	-	.	ID=gene-AC56_RS18910;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=AC56_RS18910;old_locus_tag=AC56_0641
NZ_JJLS01000124.1	Protein Homology	CDS	35661	36128	.	-	0	ID=cds-WP_000776104.1;Parent=gene-AC56_RS18910;Dbxref=GenBank:WP_000776104.1;Name=WP_000776104.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245807.1;locus_tag=AC56_RS18910;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_000776104.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	36132	36449	.	-	.	ID=gene-AC56_RS18905;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=AC56_RS18905;old_locus_tag=AC56_0642
NZ_JJLS01000124.1	Protein Homology	CDS	36132	36449	.	-	0	ID=cds-WP_001161664.1;Parent=gene-AC56_RS18905;Dbxref=GenBank:WP_001161664.1;Name=WP_001161664.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373852.1;locus_tag=AC56_RS18905;product=ribosome silencing factor;protein_id=WP_001161664.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	36709	37320	.	-	.	ID=gene-AC56_RS18900;Name=cobC;gbkey=Gene;gene=cobC;gene_biotype=protein_coding;locus_tag=AC56_RS18900;old_locus_tag=AC56_0643
NZ_JJLS01000124.1	Protein Homology	CDS	36709	37320	.	-	0	ID=cds-WP_032277985.1;Parent=gene-AC56_RS18900;Dbxref=GenBank:WP_032277985.1;Name=WP_032277985.1;Ontology_term=GO:0009236,GO:0043755;gbkey=CDS;gene=cobC;go_function=alpha-ribazole phosphatase activity|0043755||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308703.1;locus_tag=AC56_RS18900;product=adenosylcobalamin/alpha-ribazole phosphatase;protein_id=WP_032277985.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	37344	37985	.	-	.	ID=gene-AC56_RS18895;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=AC56_RS18895;old_locus_tag=AC56_0644
NZ_JJLS01000124.1	Protein Homology	CDS	37344	37985	.	-	0	ID=cds-WP_000838889.1;Parent=gene-AC56_RS18895;Dbxref=GenBank:WP_000838889.1;Name=WP_000838889.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415172.1;locus_tag=AC56_RS18895;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_000838889.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	37987	39018	.	-	.	ID=gene-AC56_RS18890;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=AC56_RS18890;old_locus_tag=AC56_0645
NZ_JJLS01000124.1	Protein Homology	CDS	37987	39018	.	-	0	ID=cds-WP_032277986.1;Parent=gene-AC56_RS18890;Dbxref=GenBank:WP_032277986.1;Name=WP_032277986.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308705.1;locus_tag=AC56_RS18890;product=DNA polymerase III subunit delta;protein_id=WP_032277986.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	39018	39599	.	-	.	ID=gene-AC56_RS18885;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=AC56_RS18885;old_locus_tag=AC56_0646
NZ_JJLS01000124.1	Protein Homology	CDS	39018	39599	.	-	0	ID=cds-WP_001432643.1;Parent=gene-AC56_RS18885;Dbxref=GenBank:WP_001432643.1;Name=WP_001432643.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308706.1;locus_tag=AC56_RS18885;product=LPS assembly lipoprotein LptE;protein_id=WP_001432643.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	39614	42196	.	-	.	ID=gene-AC56_RS18880;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=AC56_RS18880;old_locus_tag=AC56_0647
NZ_JJLS01000124.1	Protein Homology	CDS	39614	42196	.	-	0	ID=cds-WP_032277989.1;Parent=gene-AC56_RS18880;Dbxref=GenBank:WP_032277989.1;Name=WP_032277989.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1;locus_tag=AC56_RS18880;product=leucine--tRNA ligase;protein_id=WP_032277989.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	42432	42914	.	+	.	ID=gene-AC56_RS18875;Name=ybeL;gbkey=Gene;gene=ybeL;gene_biotype=protein_coding;locus_tag=AC56_RS18875;old_locus_tag=AC56_0648
NZ_JJLS01000124.1	Protein Homology	CDS	42432	42914	.	+	0	ID=cds-WP_001044880.1;Parent=gene-AC56_RS18875;Dbxref=GenBank:WP_001044880.1;Name=WP_001044880.1;gbkey=CDS;gene=ybeL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308708.1;locus_tag=AC56_RS18875;product=zinc ribbon-containing protein;protein_id=WP_001044880.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	42984	43961	.	-	.	ID=gene-AC56_RS18870;Name=ybeQ;gbkey=Gene;gene=ybeQ;gene_biotype=protein_coding;locus_tag=AC56_RS18870;old_locus_tag=AC56_0649
NZ_JJLS01000124.1	Protein Homology	CDS	42984	43961	.	-	0	ID=cds-WP_000578178.1;Parent=gene-AC56_RS18870;Dbxref=GenBank:WP_000578178.1;Name=WP_000578178.1;gbkey=CDS;gene=ybeQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415177.4;locus_tag=AC56_RS18870;product=Sel1 family TPR-like repeat protein YbeQ;protein_id=WP_000578178.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	44125	44832	.	+	.	ID=gene-AC56_RS18865;Name=ybeR;gbkey=Gene;gene=ybeR;gene_biotype=protein_coding;locus_tag=AC56_RS18865;old_locus_tag=AC56_0650
NZ_JJLS01000124.1	Protein Homology	CDS	44125	44832	.	+	0	ID=cds-WP_000367023.1;Parent=gene-AC56_RS18865;Dbxref=GenBank:WP_000367023.1;Name=WP_000367023.1;gbkey=CDS;gene=ybeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415178.1;locus_tag=AC56_RS18865;product=DUF1266 domain-containing protein;protein_id=WP_000367023.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	44829	46256	.	+	.	ID=gene-AC56_RS18860;Name=djlB;gbkey=Gene;gene=djlB;gene_biotype=protein_coding;locus_tag=AC56_RS18860;old_locus_tag=AC56_0651
NZ_JJLS01000124.1	Protein Homology	CDS	44829	46256	.	+	0	ID=cds-WP_032277987.1;Parent=gene-AC56_RS18860;Dbxref=GenBank:WP_032277987.1;Name=WP_032277987.1;gbkey=CDS;gene=djlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415179.1;locus_tag=AC56_RS18860;product=J domain-containing protein;protein_id=WP_032277987.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	46266	46820	.	-	.	ID=gene-AC56_RS18855;Name=ybeT;gbkey=Gene;gene=ybeT;gene_biotype=protein_coding;locus_tag=AC56_RS18855;old_locus_tag=AC56_0652
NZ_JJLS01000124.1	Protein Homology	CDS	46266	46820	.	-	0	ID=cds-WP_001035673.1;Parent=gene-AC56_RS18855;Dbxref=GenBank:WP_001035673.1;Name=WP_001035673.1;Ontology_term=GO:0005515;gbkey=CDS;gene=ybeT;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308712.1;locus_tag=AC56_RS18855;product=tetratricopeptide repeat protein;protein_id=WP_001035673.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	46922	47629	.	+	.	ID=gene-AC56_RS18850;Name=ybeU;gbkey=Gene;gene=ybeU;gene_biotype=protein_coding;locus_tag=AC56_RS18850;old_locus_tag=AC56_0653
NZ_JJLS01000124.1	Protein Homology	CDS	46922	47629	.	+	0	ID=cds-WP_001030934.1;Parent=gene-AC56_RS18850;Dbxref=GenBank:WP_001030934.1;Name=WP_001030934.1;gbkey=CDS;gene=ybeU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415181.1;locus_tag=AC56_RS18850;product=DUF1266 domain-containing protein;protein_id=WP_001030934.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	47626	49077	.	+	.	ID=gene-AC56_RS18845;Name=djlC;gbkey=Gene;gene=djlC;gene_biotype=protein_coding;locus_tag=AC56_RS18845;old_locus_tag=AC56_0654
NZ_JJLS01000124.1	Protein Homology	CDS	47626	49077	.	+	0	ID=cds-WP_032277988.1;Parent=gene-AC56_RS18845;Dbxref=GenBank:WP_032277988.1;Name=WP_032277988.1;gbkey=CDS;gene=djlC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415182.1;locus_tag=AC56_RS18845;product=co-chaperone DjlC;protein_id=WP_032277988.1;transl_table=11
NZ_JJLS01000124.1	RefSeq	pseudogene	49137	50518	.	-	.	ID=gene-AC56_RS0125305;Name=hscC;end_range=50518,.;gbkey=Gene;gene=hscC;gene_biotype=pseudogene;locus_tag=AC56_RS0125305;old_locus_tag=AC56_0656;partial=true;pseudo=true
NZ_JJLS01000124.1	Protein Homology	CDS	49137	50518	.	-	0	ID=cds-AC56_RS0125305;Parent=gene-AC56_RS0125305;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=50518,.;gbkey=CDS;gene=hscC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415183.1;locus_tag=AC56_RS0125305;partial=true;product=molecular chaperone HscC;pseudo=true;transl_table=11
NZ_JJLS01000124.1	RefSeq	gene	50573	50796	.	+	.	ID=gene-AC56_RS31050;Name=AC56_RS31050;end_range=50796,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS31050;partial=true
NZ_JJLS01000124.1	Protein Homology	CDS	50573	50796	.	+	0	ID=cds-WP_162752767.1;Parent=gene-AC56_RS31050;Dbxref=GenBank:WP_162752767.1;Name=WP_162752767.1;Ontology_term=GO:0006313;end_range=50796,.;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558270.1;locus_tag=AC56_RS31050;partial=true;product=IS1 family transposase;protein_id=WP_162752767.1;transl_table=11
##sequence-region NZ_JJLS01000125.1 1 14662
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000125.1	RefSeq	region	1	14662	.	+	.	ID=NZ_JJLS01000125.1:1..14662;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000125.1	RefSeq	gene	1	382	.	+	.	ID=gene-AC56_RS28905;Name=AC56_RS28905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS28905;old_locus_tag=AC56_0658;partial=true;start_range=.,1
NZ_JJLS01000125.1	Protein Homology	CDS	1	382	.	+	1	ID=cds-WP_071999472.1;Parent=gene-AC56_RS28905;Dbxref=GenBank:WP_071999472.1;Name=WP_071999472.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS28905;partial=true;product=IS1 family transposase;protein_id=WP_071999472.1;start_range=.,1;transl_table=11
NZ_JJLS01000125.1	RefSeq	pseudogene	398	694	.	-	.	ID=gene-AC56_RS0125320;Name=AC56_RS0125320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0125320;partial=true;pseudo=true;start_range=.,398
NZ_JJLS01000125.1	Protein Homology	CDS	398	694	.	-	0	ID=cds-AC56_RS0125320;Parent=gene-AC56_RS0125320;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308716.1;locus_tag=AC56_RS0125320;partial=true;product=Hsp70 family protein;pseudo=true;start_range=.,398;transl_table=11
NZ_JJLS01000125.1	RefSeq	gene	778	1713	.	-	.	ID=gene-AC56_RS18840;Name=rihA;gbkey=Gene;gene=rihA;gene_biotype=protein_coding;locus_tag=AC56_RS18840;old_locus_tag=AC56_0659
NZ_JJLS01000125.1	Protein Homology	CDS	778	1713	.	-	0	ID=cds-WP_032277991.1;Parent=gene-AC56_RS18840;Dbxref=GenBank:WP_032277991.1;Name=WP_032277991.1;Ontology_term=GO:0006206,GO:0050263;gbkey=CDS;gene=rihA;go_function=ribosylpyrimidine nucleosidase activity|0050263||IEA;go_process=pyrimidine nucleobase metabolic process|0006206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415184.1;locus_tag=AC56_RS18840;product=pyrimidine-specific ribonucleoside hydrolase RihA;protein_id=WP_032277991.1;transl_table=11
NZ_JJLS01000125.1	RefSeq	gene	1831	2556	.	-	.	ID=gene-AC56_RS18835;Name=gltL;gbkey=Gene;gene=gltL;gene_biotype=protein_coding;locus_tag=AC56_RS18835;old_locus_tag=AC56_0660
NZ_JJLS01000125.1	Protein Homology	CDS	1831	2556	.	-	0	ID=cds-WP_032277992.1;Parent=gene-AC56_RS18835;Dbxref=GenBank:WP_032277992.1;Name=WP_032277992.1;gbkey=CDS;gene=gltL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245804.1;locus_tag=AC56_RS18835;product=glutamate/aspartate ABC transporter ATP-binding protein GltL;protein_id=WP_032277992.1;transl_table=11
NZ_JJLS01000125.1	RefSeq	gene	2556	3230	.	-	.	ID=gene-AC56_RS18830;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;locus_tag=AC56_RS18830;old_locus_tag=AC56_0661
NZ_JJLS01000125.1	Protein Homology	CDS	2556	3230	.	-	0	ID=cds-WP_000272830.1;Parent=gene-AC56_RS18830;Dbxref=GenBank:WP_000272830.1;Name=WP_000272830.1;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706558.1;locus_tag=AC56_RS18830;product=glutamate/aspartate ABC transporter permease GltK;protein_id=WP_000272830.1;transl_table=11
NZ_JJLS01000125.1	RefSeq	gene	3230	3970	.	-	.	ID=gene-AC56_RS18825;Name=gltJ;gbkey=Gene;gene=gltJ;gene_biotype=protein_coding;locus_tag=AC56_RS18825;old_locus_tag=AC56_0662
NZ_JJLS01000125.1	Protein Homology	CDS	3230	3970	.	-	0	ID=cds-WP_000020941.1;Parent=gene-AC56_RS18825;Dbxref=GenBank:WP_000020941.1;Name=WP_000020941.1;gbkey=CDS;gene=gltJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415187.1;locus_tag=AC56_RS18825;product=glutamate/aspartate ABC transporter permease GltJ;protein_id=WP_000020941.1;transl_table=11
NZ_JJLS01000125.1	RefSeq	gene	4140	5048	.	-	.	ID=gene-AC56_RS18820;Name=gltI;gbkey=Gene;gene=gltI;gene_biotype=protein_coding;locus_tag=AC56_RS18820;old_locus_tag=AC56_0663
NZ_JJLS01000125.1	Protein Homology	CDS	4140	5048	.	-	0	ID=cds-WP_032277993.1;Parent=gene-AC56_RS18820;Dbxref=GenBank:WP_032277993.1;Name=WP_032277993.1;gbkey=CDS;gene=gltI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308721.1;locus_tag=AC56_RS18820;product=glutamate/aspartate ABC transporter substrate-binding protein GltI;protein_id=WP_032277993.1;transl_table=11
NZ_JJLS01000125.1	RefSeq	gene	5503	7380	.	+	.	ID=gene-AC56_RS18815;Name=AC56_RS18815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS18815;old_locus_tag=AC56_0665
NZ_JJLS01000125.1	Protein Homology	CDS	5503	7380	.	+	0	ID=cds-WP_032277994.1;Parent=gene-AC56_RS18815;Dbxref=GenBank:WP_032277994.1;Name=WP_032277994.1;Ontology_term=GO:0004252,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001276742.1;locus_tag=AC56_RS18815;product=rhomboid family intramembrane serine protease;protein_id=WP_032277994.1;transl_table=11
NZ_JJLS01000125.1	RefSeq	gene	7507	9045	.	-	.	ID=gene-AC56_RS18810;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=AC56_RS18810;old_locus_tag=AC56_0666
NZ_JJLS01000125.1	Protein Homology	CDS	7507	9045	.	-	0	ID=cds-WP_000853023.1;Parent=gene-AC56_RS18810;Dbxref=GenBank:WP_000853023.1;Name=WP_000853023.1;Ontology_term=GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415190.1;locus_tag=AC56_RS18810;product=apolipoprotein N-acyltransferase;protein_id=WP_000853023.1;transl_table=11
NZ_JJLS01000125.1	RefSeq	gene	9070	9948	.	-	.	ID=gene-AC56_RS18805;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=AC56_RS18805;old_locus_tag=AC56_0667
NZ_JJLS01000125.1	Protein Homology	CDS	9070	9948	.	-	0	ID=cds-WP_001278605.1;Parent=gene-AC56_RS18805;Dbxref=GenBank:WP_001278605.1;Name=WP_001278605.1;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.;Ontology_term=GO:0050660;gbkey=CDS;gene=corC;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308723.1;locus_tag=AC56_RS18805;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=WP_001278605.1;transl_table=11
NZ_JJLS01000125.1	RefSeq	gene	10038	10505	.	-	.	ID=gene-AC56_RS18800;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=AC56_RS18800;old_locus_tag=AC56_0668
NZ_JJLS01000125.1	Protein Homology	CDS	10038	10505	.	-	0	ID=cds-WP_000084469.1;Parent=gene-AC56_RS18800;Dbxref=GenBank:WP_000084469.1;Name=WP_000084469.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014169133.1;locus_tag=AC56_RS18800;product=rRNA maturation RNase YbeY;protein_id=WP_000084469.1;transl_table=11
NZ_JJLS01000125.1	RefSeq	gene	10502	11542	.	-	.	ID=gene-AC56_RS18795;Name=ybeZ;gbkey=Gene;gene=ybeZ;gene_biotype=protein_coding;locus_tag=AC56_RS18795;old_locus_tag=AC56_0669
NZ_JJLS01000125.1	Protein Homology	CDS	10502	11542	.	-	0	ID=cds-WP_001018040.1;Parent=gene-AC56_RS18795;Dbxref=GenBank:WP_001018040.1;Name=WP_001018040.1;Ontology_term=GO:0005524;gbkey=CDS;gene=ybeZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415193.2;locus_tag=AC56_RS18795;product=PhoH family protein;protein_id=WP_001018040.1;transl_table=11
NZ_JJLS01000125.1	RefSeq	gene	11695	13119	.	-	.	ID=gene-AC56_RS18790;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=AC56_RS18790;old_locus_tag=AC56_0670
NZ_JJLS01000125.1	Protein Homology	CDS	11695	13119	.	-	0	ID=cds-WP_000162740.1;Parent=gene-AC56_RS18790;Dbxref=GenBank:WP_000162740.1;Name=WP_000162740.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308726.1;locus_tag=AC56_RS18790;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_000162740.1;transl_table=11
NZ_JJLS01000125.1	RefSeq	gene	13265	14440	.	+	.	ID=gene-AC56_RS18785;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=AC56_RS18785;old_locus_tag=AC56_0671
NZ_JJLS01000125.1	Protein Homology	CDS	13265	14440	.	+	0	ID=cds-WP_000184541.1-2;Parent=gene-AC56_RS18785;Dbxref=GenBank:WP_000184541.1;Name=WP_000184541.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiF;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415195.1;locus_tag=AC56_RS18785;product=3-demethoxyubiquinol 3-hydroxylase;protein_id=WP_000184541.1;transl_table=11
##sequence-region NZ_JJLS01000126.1 1 3226
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000126.1	RefSeq	region	1	3226	.	+	.	ID=NZ_JJLS01000126.1:1..3226;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000126.1	RefSeq	pseudogene	1	280	.	-	.	ID=gene-AC56_RS18775;Name=AC56_RS18775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS18775;old_locus_tag=AC56_0674;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000126.1	Protein Homology	CDS	1	280	.	-	0	ID=cds-AC56_RS18775;Parent=gene-AC56_RS18775;Note=catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A)%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308726.1;locus_tag=AC56_RS18775;partial=true;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000126.1	RefSeq	gene	426	1601	.	+	.	ID=gene-AC56_RS18770;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=AC56_RS18770;old_locus_tag=AC56_0675
NZ_JJLS01000126.1	Protein Homology	CDS	426	1601	.	+	0	ID=cds-WP_000184541.1-3;Parent=gene-AC56_RS18770;Dbxref=GenBank:WP_000184541.1;Name=WP_000184541.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiF;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415195.1;locus_tag=AC56_RS18770;product=3-demethoxyubiquinol 3-hydroxylase;protein_id=WP_000184541.1;transl_table=11
NZ_JJLS01000126.1	RefSeq	gene	1755	1829	.	-	.	ID=gene-AC56_RS18765;Name=AC56_RS18765;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS18765;old_locus_tag=AC56_0676
NZ_JJLS01000126.1	tRNAscan-SE	tRNA	1755	1829	.	-	.	ID=rna-AC56_RS18765;Parent=gene-AC56_RS18765;anticodon=(pos:complement(1795..1797));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS18765;product=tRNA-Gln
NZ_JJLS01000126.1	tRNAscan-SE	exon	1755	1829	.	-	.	ID=exon-AC56_RS18765-1;Parent=rna-AC56_RS18765;anticodon=(pos:complement(1795..1797));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS18765;product=tRNA-Gln
NZ_JJLS01000126.1	RefSeq	gene	1867	1941	.	-	.	ID=gene-AC56_RS18760;Name=AC56_RS18760;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS18760;old_locus_tag=AC56_0677
NZ_JJLS01000126.1	tRNAscan-SE	tRNA	1867	1941	.	-	.	ID=rna-AC56_RS18760;Parent=gene-AC56_RS18760;anticodon=(pos:complement(1907..1909));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS18760;product=tRNA-Gln
NZ_JJLS01000126.1	tRNAscan-SE	exon	1867	1941	.	-	.	ID=exon-AC56_RS18760-1;Parent=rna-AC56_RS18760;anticodon=(pos:complement(1907..1909));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS18760;product=tRNA-Gln
NZ_JJLS01000126.1	RefSeq	gene	1979	2053	.	-	.	ID=gene-AC56_RS18755;Name=AC56_RS18755;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS18755;old_locus_tag=AC56_0678
NZ_JJLS01000126.1	tRNAscan-SE	tRNA	1979	2053	.	-	.	ID=rna-AC56_RS18755;Parent=gene-AC56_RS18755;anticodon=(pos:complement(2019..2021));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS18755;product=tRNA-Gln
NZ_JJLS01000126.1	tRNAscan-SE	exon	1979	2053	.	-	.	ID=exon-AC56_RS18755-1;Parent=rna-AC56_RS18755;anticodon=(pos:complement(2019..2021));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS18755;product=tRNA-Gln
NZ_JJLS01000126.1	RefSeq	gene	2091	2165	.	-	.	ID=gene-AC56_RS18750;Name=AC56_RS18750;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS18750;old_locus_tag=AC56_0679
NZ_JJLS01000126.1	tRNAscan-SE	tRNA	2091	2165	.	-	.	ID=rna-AC56_RS18750;Parent=gene-AC56_RS18750;anticodon=(pos:complement(2131..2133));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS18750;product=tRNA-Gln
NZ_JJLS01000126.1	tRNAscan-SE	exon	2091	2165	.	-	.	ID=exon-AC56_RS18750-1;Parent=rna-AC56_RS18750;anticodon=(pos:complement(2131..2133));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS18750;product=tRNA-Gln
NZ_JJLS01000126.1	RefSeq	gene	2213	2289	.	-	.	ID=gene-AC56_RS18745;Name=AC56_RS18745;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS18745;old_locus_tag=AC56_0680
NZ_JJLS01000126.1	tRNAscan-SE	tRNA	2213	2289	.	-	.	ID=rna-AC56_RS18745;Parent=gene-AC56_RS18745;anticodon=(pos:complement(2253..2255));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS18745;product=tRNA-Met
NZ_JJLS01000126.1	tRNAscan-SE	exon	2213	2289	.	-	.	ID=exon-AC56_RS18745-1;Parent=rna-AC56_RS18745;anticodon=(pos:complement(2253..2255));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS18745;product=tRNA-Met
NZ_JJLS01000126.1	RefSeq	gene	2669	3226	.	-	.	ID=gene-AC56_RS18740;Name=AC56_RS18740;end_range=3226,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS18740;old_locus_tag=AC56_0681;partial=true
NZ_JJLS01000126.1	Protein Homology	CDS	2669	3226	.	-	0	ID=cds-WP_032172341.1;Parent=gene-AC56_RS18740;Dbxref=GenBank:WP_032172341.1;Name=WP_032172341.1;Ontology_term=GO:0006529,GO:0004066;end_range=3226,.;gbkey=CDS;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=AC56_RS18740;partial=true;product=asparagine synthase-related protein;protein_id=WP_032172341.1;transl_table=11
##sequence-region NZ_JJLS01000127.1 1 21893
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000127.1	RefSeq	region	1	21893	.	+	.	ID=NZ_JJLS01000127.1:1..21893;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000127.1	RefSeq	gene	1	1128	.	+	.	ID=gene-AC56_RS18735;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=AC56_RS18735;old_locus_tag=AC56_0682;partial=true;start_range=.,1
NZ_JJLS01000127.1	Protein Homology	CDS	1	1128	.	+	0	ID=cds-WP_050440193.1-2;Parent=gene-AC56_RS18735;Dbxref=GenBank:WP_050440193.1;Name=WP_050440193.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiF;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415195.1;locus_tag=AC56_RS18735;partial=true;product=3-demethoxyubiquinol 3-hydroxylase;protein_id=WP_050440193.1;start_range=.,1;transl_table=11
NZ_JJLS01000127.1	RefSeq	gene	1282	1356	.	-	.	ID=gene-AC56_RS18730;Name=AC56_RS18730;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS18730;old_locus_tag=AC56_0684
NZ_JJLS01000127.1	tRNAscan-SE	tRNA	1282	1356	.	-	.	ID=rna-AC56_RS18730;Parent=gene-AC56_RS18730;anticodon=(pos:complement(1322..1324));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS18730;product=tRNA-Gln
NZ_JJLS01000127.1	tRNAscan-SE	exon	1282	1356	.	-	.	ID=exon-AC56_RS18730-1;Parent=rna-AC56_RS18730;anticodon=(pos:complement(1322..1324));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS18730;product=tRNA-Gln
NZ_JJLS01000127.1	RefSeq	gene	1404	1480	.	-	.	ID=gene-AC56_RS18725;Name=AC56_RS18725;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS18725;old_locus_tag=AC56_0685
NZ_JJLS01000127.1	tRNAscan-SE	tRNA	1404	1480	.	-	.	ID=rna-AC56_RS18725;Parent=gene-AC56_RS18725;anticodon=(pos:complement(1444..1446));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS18725;product=tRNA-Met
NZ_JJLS01000127.1	tRNAscan-SE	exon	1404	1480	.	-	.	ID=exon-AC56_RS18725-1;Parent=rna-AC56_RS18725;anticodon=(pos:complement(1444..1446));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS18725;product=tRNA-Met
NZ_JJLS01000127.1	RefSeq	gene	1496	1570	.	-	.	ID=gene-AC56_RS18720;Name=AC56_RS18720;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS18720;old_locus_tag=AC56_0686
NZ_JJLS01000127.1	tRNAscan-SE	tRNA	1496	1570	.	-	.	ID=rna-AC56_RS18720;Parent=gene-AC56_RS18720;anticodon=(pos:complement(1536..1538));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS18720;product=tRNA-Gln
NZ_JJLS01000127.1	tRNAscan-SE	exon	1496	1570	.	-	.	ID=exon-AC56_RS18720-1;Parent=rna-AC56_RS18720;anticodon=(pos:complement(1536..1538));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS18720;product=tRNA-Gln
NZ_JJLS01000127.1	RefSeq	gene	1605	1679	.	-	.	ID=gene-AC56_RS18715;Name=AC56_RS18715;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS18715;old_locus_tag=AC56_0687
NZ_JJLS01000127.1	tRNAscan-SE	tRNA	1605	1679	.	-	.	ID=rna-AC56_RS18715;Parent=gene-AC56_RS18715;anticodon=(pos:complement(1645..1647));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS18715;product=tRNA-Gln
NZ_JJLS01000127.1	tRNAscan-SE	exon	1605	1679	.	-	.	ID=exon-AC56_RS18715-1;Parent=rna-AC56_RS18715;anticodon=(pos:complement(1645..1647));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS18715;product=tRNA-Gln
NZ_JJLS01000127.1	RefSeq	gene	1703	1787	.	-	.	ID=gene-AC56_RS18710;Name=AC56_RS18710;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS18710;old_locus_tag=AC56_0688
NZ_JJLS01000127.1	tRNAscan-SE	tRNA	1703	1787	.	-	.	ID=rna-AC56_RS18710;Parent=gene-AC56_RS18710;anticodon=(pos:complement(1751..1753));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS18710;product=tRNA-Leu
NZ_JJLS01000127.1	tRNAscan-SE	exon	1703	1787	.	-	.	ID=exon-AC56_RS18710-1;Parent=rna-AC56_RS18710;anticodon=(pos:complement(1751..1753));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS18710;product=tRNA-Leu
NZ_JJLS01000127.1	RefSeq	gene	1796	1872	.	-	.	ID=gene-AC56_RS18705;Name=AC56_RS18705;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS18705;old_locus_tag=AC56_0689
NZ_JJLS01000127.1	tRNAscan-SE	tRNA	1796	1872	.	-	.	ID=rna-AC56_RS18705;Parent=gene-AC56_RS18705;anticodon=(pos:complement(1836..1838));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS18705;product=tRNA-Met
NZ_JJLS01000127.1	tRNAscan-SE	exon	1796	1872	.	-	.	ID=exon-AC56_RS18705-1;Parent=rna-AC56_RS18705;anticodon=(pos:complement(1836..1838));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS18705;product=tRNA-Met
NZ_JJLS01000127.1	RefSeq	gene	2252	3916	.	-	.	ID=gene-AC56_RS18700;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=AC56_RS18700;old_locus_tag=AC56_0690
NZ_JJLS01000127.1	Protein Homology	CDS	2252	3916	.	-	0	ID=cds-WP_000337077.1;Parent=gene-AC56_RS18700;Dbxref=GenBank:WP_000337077.1;Name=WP_000337077.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=AC56_RS18700;product=asparagine synthase B;protein_id=WP_000337077.1;transl_table=11
NZ_JJLS01000127.1	RefSeq	gene	4313	5065	.	-	.	ID=gene-AC56_RS18695;Name=nagD;gbkey=Gene;gene=nagD;gene_biotype=protein_coding;locus_tag=AC56_RS18695;old_locus_tag=AC56_0692
NZ_JJLS01000127.1	Protein Homology	CDS	4313	5065	.	-	0	ID=cds-WP_000153129.1;Parent=gene-AC56_RS18695;Dbxref=GenBank:WP_000153129.1;Name=WP_000153129.1;gbkey=CDS;gene=nagD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308732.1;locus_tag=AC56_RS18695;product=ribonucleotide monophosphatase NagD;protein_id=WP_000153129.1;transl_table=11
NZ_JJLS01000127.1	RefSeq	gene	5113	6333	.	-	.	ID=gene-AC56_RS18690;Name=nagC;gbkey=Gene;gene=nagC;gene_biotype=protein_coding;gene_synonym=nagR;locus_tag=AC56_RS18690;old_locus_tag=AC56_0693
NZ_JJLS01000127.1	Protein Homology	CDS	5113	6333	.	-	0	ID=cds-WP_000187594.1;Parent=gene-AC56_RS18690;Dbxref=GenBank:WP_000187594.1;Name=WP_000187594.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=nagC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308733.1;locus_tag=AC56_RS18690;product=DNA-binding transcriptional regulator NagC;protein_id=WP_000187594.1;transl_table=11
NZ_JJLS01000127.1	RefSeq	gene	6342	7490	.	-	.	ID=gene-AC56_RS18685;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=AC56_RS18685;old_locus_tag=AC56_0694
NZ_JJLS01000127.1	Protein Homology	CDS	6342	7490	.	-	0	ID=cds-WP_032252788.1;Parent=gene-AC56_RS18685;Dbxref=GenBank:WP_032252788.1;Name=WP_032252788.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308734.1;locus_tag=AC56_RS18685;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_032252788.1;transl_table=11
NZ_JJLS01000127.1	RefSeq	gene	7550	8350	.	-	.	ID=gene-AC56_RS18680;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=AC56_RS18680;old_locus_tag=AC56_0695
NZ_JJLS01000127.1	Protein Homology	CDS	7550	8350	.	-	0	ID=cds-WP_001237072.1;Parent=gene-AC56_RS18680;Dbxref=GenBank:WP_001237072.1;Name=WP_001237072.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805656.1;locus_tag=AC56_RS18680;product=glucosamine-6-phosphate deaminase;protein_id=WP_001237072.1;transl_table=11
NZ_JJLS01000127.1	RefSeq	gene	8683	10629	.	+	.	ID=gene-AC56_RS18675;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=AC56_RS18675;old_locus_tag=AC56_0697
NZ_JJLS01000127.1	Protein Homology	CDS	8683	10629	.	+	0	ID=cds-WP_001023104.1;Parent=gene-AC56_RS18675;Dbxref=GenBank:WP_001023104.1;Name=WP_001023104.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308736.1;locus_tag=AC56_RS18675;product=PTS N-acetyl glucosamine transporter subunit IIABC;protein_id=WP_001023104.1;transl_table=11
NZ_JJLS01000127.1	RefSeq	gene	10832	12496	.	+	.	ID=gene-AC56_RS18670;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=AC56_RS18670;old_locus_tag=AC56_0699
NZ_JJLS01000127.1	Protein Homology	CDS	10832	12496	.	+	0	ID=cds-WP_001287154.1;Parent=gene-AC56_RS18670;Dbxref=GenBank:WP_001287154.1;Name=WP_001287154.1;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524,GO:0005737;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415206.1;locus_tag=AC56_RS18670;product=glutamine--tRNA ligase;protein_id=WP_001287154.1;transl_table=11
NZ_JJLS01000127.1	RefSeq	gene	13073	14479	.	+	.	ID=gene-AC56_RS18665;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=AC56_RS18665;old_locus_tag=AC56_0701
NZ_JJLS01000127.1	Protein Homology	CDS	13073	14479	.	+	0	ID=cds-WP_001258839.1;Parent=gene-AC56_RS18665;Dbxref=GenBank:WP_001258839.1;Name=WP_001258839.1;Ontology_term=GO:0015774,GO:0052778,GO:0015288;gbkey=CDS;gene=chiP;go_function=porin activity|0015288||IEA;go_process=polysaccharide transport|0015774||IEA,diacetylchitobiose metabolic process|0052778||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415207.1;locus_tag=AC56_RS18665;product=chitoporin ChiP;protein_id=WP_001258839.1;transl_table=11
NZ_JJLS01000127.1	RefSeq	gene	14529	14855	.	+	.	ID=gene-AC56_RS18660;Name=chiQ;gbkey=Gene;gene=chiQ;gene_biotype=protein_coding;locus_tag=AC56_RS18660;old_locus_tag=AC56_0702
NZ_JJLS01000127.1	Protein Homology	CDS	14529	14855	.	+	0	ID=cds-WP_000733572.1;Parent=gene-AC56_RS18660;Dbxref=GenBank:WP_000733572.1;Name=WP_000733572.1;gbkey=CDS;gene=chiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415208.1;locus_tag=AC56_RS18660;product=ChiQ/YbfN family lipoprotein;protein_id=WP_000733572.1;transl_table=11
NZ_JJLS01000127.1	RefSeq	gene	14940	15386	.	-	.	ID=gene-AC56_RS18655;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=AC56_RS18655;old_locus_tag=AC56_0703
NZ_JJLS01000127.1	Protein Homology	CDS	14940	15386	.	-	0	ID=cds-WP_000131702.1;Parent=gene-AC56_RS18655;Dbxref=GenBank:WP_000131702.1;Name=WP_000131702.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308741.1;locus_tag=AC56_RS18655;product=ferric iron uptake transcriptional regulator;protein_id=WP_000131702.1;transl_table=11
NZ_JJLS01000127.1	RefSeq	gene	15379	15465	.	-	.	ID=gene-AC56_RS0125325;Name=uof;gbkey=Gene;gene=uof;gene_biotype=protein_coding;locus_tag=AC56_RS0125325
NZ_JJLS01000127.1	Protein Homology	CDS	15379	15465	.	-	0	ID=cds-WP_001406816.1;Parent=gene-AC56_RS0125325;Dbxref=GenBank:WP_001406816.1;Name=WP_001406816.1;gbkey=CDS;gene=uof;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001491546.1;locus_tag=AC56_RS0125325;product=fur leader peptide;protein_id=WP_001406816.1;transl_table=11
NZ_JJLS01000127.1	RefSeq	gene	15675	16205	.	-	.	ID=gene-AC56_RS18650;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=AC56_RS18650;old_locus_tag=AC56_0704
NZ_JJLS01000127.1	Protein Homology	CDS	15675	16205	.	-	0	ID=cds-WP_001018618.1;Parent=gene-AC56_RS18650;Dbxref=GenBank:WP_001018618.1;Name=WP_001018618.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308742.1;locus_tag=AC56_RS18650;product=flavodoxin FldA;protein_id=WP_001018618.1;transl_table=11
NZ_JJLS01000127.1	RefSeq	gene	16345	16638	.	-	.	ID=gene-AC56_RS18645;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;locus_tag=AC56_RS18645;old_locus_tag=AC56_0705
NZ_JJLS01000127.1	Protein Homology	CDS	16345	16638	.	-	0	ID=cds-WP_032277997.1;Parent=gene-AC56_RS18645;Dbxref=GenBank:WP_032277997.1;Name=WP_032277997.1;gbkey=CDS;gene=ybfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415211.2;locus_tag=AC56_RS18645;product=LexA regulated protein;protein_id=WP_032277997.1;transl_table=11
NZ_JJLS01000127.1	RefSeq	gene	16778	17542	.	-	.	ID=gene-AC56_RS18640;Name=ybfF;gbkey=Gene;gene=ybfF;gene_biotype=protein_coding;locus_tag=AC56_RS18640;old_locus_tag=AC56_0706
NZ_JJLS01000127.1	Protein Homology	CDS	16778	17542	.	-	0	ID=cds-WP_032277995.1;Parent=gene-AC56_RS18640;Dbxref=GenBank:WP_032277995.1;Name=WP_032277995.1;gbkey=CDS;gene=ybfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308744.1;locus_tag=AC56_RS18640;product=esterase;protein_id=WP_032277995.1;transl_table=11
NZ_JJLS01000127.1	RefSeq	gene	17727	18272	.	+	.	ID=gene-AC56_RS18635;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=AC56_RS18635;old_locus_tag=AC56_0707
NZ_JJLS01000127.1	Protein Homology	CDS	17727	18272	.	+	0	ID=cds-WP_032277996.1;Parent=gene-AC56_RS18635;Dbxref=GenBank:WP_032277996.1;Name=WP_032277996.1;Ontology_term=GO:0032297,GO:0003677;gbkey=CDS;gene=seqA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415213.1;locus_tag=AC56_RS18635;product=replication initiation negative regulator SeqA;protein_id=WP_032277996.1;transl_table=11
NZ_JJLS01000127.1	RefSeq	gene	18298	19938	.	+	.	ID=gene-AC56_RS18630;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=AC56_RS18630;old_locus_tag=AC56_0708
NZ_JJLS01000127.1	Protein Homology	CDS	18298	19938	.	+	0	ID=cds-WP_001297249.1;Parent=gene-AC56_RS18630;Dbxref=GenBank:WP_001297249.1;Name=WP_001297249.1;Ontology_term=GO:0005975,GO:0004614;gbkey=CDS;gene=pgm;go_function=phosphoglucomutase activity|0004614||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415214.1;locus_tag=AC56_RS18630;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);protein_id=WP_001297249.1;transl_table=11
NZ_JJLS01000127.1	RefSeq	gene	20153	20647	.	+	.	ID=gene-AC56_RS18625;Name=AC56_RS18625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS18625;old_locus_tag=AC56_0709
NZ_JJLS01000127.1	Protein Homology	CDS	20153	20647	.	+	0	ID=cds-WP_000856355.1;Parent=gene-AC56_RS18625;Dbxref=GenBank:WP_000856355.1;Name=WP_000856355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415215.1;locus_tag=AC56_RS18625;product=hypothetical protein;protein_id=WP_000856355.1;transl_table=11
NZ_JJLS01000127.1	RefSeq	gene	20688	21338	.	-	.	ID=gene-AC56_RS18620;Name=AC56_RS18620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS18620;old_locus_tag=AC56_0710
NZ_JJLS01000127.1	Protein Homology	CDS	20688	21338	.	-	0	ID=cds-WP_001208814.1-2;Parent=gene-AC56_RS18620;Dbxref=GenBank:WP_001208814.1;Name=WP_001208814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001208812.1;locus_tag=AC56_RS18620;product=DUF2625 domain-containing protein;protein_id=WP_001208814.1;transl_table=11
NZ_JJLS01000127.1	RefSeq	pseudogene	21454	21893	.	+	.	ID=gene-AC56_RS31060;Name=AC56_RS31060;end_range=21893,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS31060;partial=true;pseudo=true
NZ_JJLS01000127.1	Protein Homology	CDS	21454	21893	.	+	0	ID=cds-AC56_RS31060;Parent=gene-AC56_RS31060;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;end_range=21893,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS31060;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000128.1 1 15794
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000128.1	RefSeq	region	1	15794	.	+	.	ID=NZ_JJLS01000128.1:1..15794;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000128.1	RefSeq	gene	1	352	.	+	.	ID=gene-AC56_RS18615;Name=AC56_RS18615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS18615;old_locus_tag=AC56_0712;partial=true;start_range=.,1
NZ_JJLS01000128.1	Protein Homology	CDS	1	352	.	+	1	ID=cds-WP_032282578.1;Parent=gene-AC56_RS18615;Dbxref=GenBank:WP_032282578.1;Name=WP_032282578.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS18615;partial=true;product=IS1 family transposase;protein_id=WP_032282578.1;start_range=.,1;transl_table=11
NZ_JJLS01000128.1	RefSeq	pseudogene	440	574	.	-	.	ID=gene-AC56_RS0125340;Name=AC56_RS0125340;end_range=574,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0125340;partial=true;pseudo=true
NZ_JJLS01000128.1	Protein Homology	CDS	440	574	.	-	0	ID=cds-AC56_RS0125340;Parent=gene-AC56_RS0125340;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0000160,GO:0006355,GO:0003677;end_range=574,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415222.1;locus_tag=AC56_RS0125340;partial=true;product=winged helix-turn-helix domain-containing protein;pseudo=true;transl_table=11
NZ_JJLS01000128.1	RefSeq	gene	665	1984	.	-	.	ID=gene-AC56_RS18610;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=AC56_RS18610;old_locus_tag=AC56_0713
NZ_JJLS01000128.1	Protein Homology	CDS	665	1984	.	-	0	ID=cds-WP_000075845.1;Parent=gene-AC56_RS18610;Dbxref=GenBank:WP_000075845.1;Name=WP_000075845.1;Ontology_term=GO:0015822,GO:0015847,GO:0055085,GO:0015496,GO:0016020;gbkey=CDS;gene=potE;go_component=membrane|0016020||IEA;go_function=putrescine:ornithine antiporter activity|0015496||IEA;go_process=ornithine transport|0015822||IEA,putrescine transport|0015847||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415219.1;locus_tag=AC56_RS18610;product=putrescine-ornithine antiporter;protein_id=WP_000075845.1;transl_table=11
NZ_JJLS01000128.1	RefSeq	gene	1981	4179	.	-	.	ID=gene-AC56_RS18605;Name=speF;gbkey=Gene;gene=speF;gene_biotype=protein_coding;locus_tag=AC56_RS18605;old_locus_tag=AC56_0714
NZ_JJLS01000128.1	Protein Homology	CDS	1981	4179	.	-	0	ID=cds-WP_032282581.1;Parent=gene-AC56_RS18605;Dbxref=GenBank:WP_032282581.1;Name=WP_032282581.1;Ontology_term=GO:0006520,GO:0004586;gbkey=CDS;gene=speF;go_function=ornithine decarboxylase activity|0004586||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308748.1;locus_tag=AC56_RS18605;product=ornithine decarboxylase SpeF;protein_id=WP_032282581.1;transl_table=11
NZ_JJLS01000128.1	RefSeq	gene	4490	4594	.	-	.	ID=gene-AC56_RS31985;Name=speFL;gbkey=Gene;gene=speFL;gene_biotype=protein_coding;locus_tag=AC56_RS31985
NZ_JJLS01000128.1	Protein Homology	CDS	4490	4594	.	-	0	ID=cds-WP_001312672.1;Parent=gene-AC56_RS31985;Dbxref=GenBank:WP_001312672.1;Name=WP_001312672.1;gbkey=CDS;gene=speFL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051176.1;locus_tag=AC56_RS31985;product=leader peptide SpeFL;protein_id=WP_001312672.1;transl_table=11
NZ_JJLS01000128.1	RefSeq	gene	4573	4707	.	-	.	ID=gene-AC56_RS33700;Name=AC56_RS33700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33700;old_locus_tag=AC56_0715
NZ_JJLS01000128.1	Protein Homology	CDS	4573	4707	.	-	0	ID=cds-WP_001299172.1;Parent=gene-AC56_RS33700;Dbxref=GenBank:WP_001299172.1;Name=WP_001299172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001417766.1;locus_tag=AC56_RS33700;product=hypothetical protein;protein_id=WP_001299172.1;transl_table=11
NZ_JJLS01000128.1	RefSeq	gene	4869	5546	.	-	.	ID=gene-AC56_RS18600;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=AC56_RS18600;old_locus_tag=AC56_0716
NZ_JJLS01000128.1	Protein Homology	CDS	4869	5546	.	-	0	ID=cds-WP_032277998.1;Parent=gene-AC56_RS18600;Dbxref=GenBank:WP_032277998.1;Name=WP_032277998.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=kdpE;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415222.1;locus_tag=AC56_RS18600;product=two-component system response regulator KdpE;protein_id=WP_032277998.1;transl_table=11
NZ_JJLS01000128.1	RefSeq	gene	5543	8227	.	-	.	ID=gene-AC56_RS18595;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=protein_coding;locus_tag=AC56_RS18595;old_locus_tag=AC56_0717
NZ_JJLS01000128.1	Protein Homology	CDS	5543	8227	.	-	0	ID=cds-WP_032282579.1;Parent=gene-AC56_RS18595;Dbxref=GenBank:WP_032282579.1;Name=WP_032282579.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=kdpD;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308750.1;locus_tag=AC56_RS18595;product=two-component system sensor histidine kinase KdpD;protein_id=WP_032282579.1;transl_table=11
NZ_JJLS01000128.1	RefSeq	gene	8220	8792	.	-	.	ID=gene-AC56_RS18590;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=AC56_RS18590;old_locus_tag=AC56_0718
NZ_JJLS01000128.1	Protein Homology	CDS	8220	8792	.	-	0	ID=cds-WP_001397033.1;Parent=gene-AC56_RS18590;Dbxref=GenBank:WP_001397033.1;Name=WP_001397033.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpC;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415224.1;locus_tag=AC56_RS18590;product=K(+)-transporting ATPase subunit C;protein_id=WP_001397033.1;transl_table=11
NZ_JJLS01000128.1	RefSeq	gene	8801	10849	.	-	.	ID=gene-AC56_RS18585;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=AC56_RS18585;old_locus_tag=AC56_0719
NZ_JJLS01000128.1	Protein Homology	CDS	8801	10849	.	-	0	ID=cds-WP_000087947.1;Parent=gene-AC56_RS18585;Dbxref=GenBank:WP_000087947.1;Name=WP_000087947.1;Ontology_term=GO:0006813,GO:0005524,GO:0008556,GO:0016020,GO:0031004;gbkey=CDS;gene=kdpB;go_component=membrane|0016020||IEA,potassium ion-transporting ATPase complex|0031004||IEA;go_function=ATP binding|0005524||IEA,P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415225.1;locus_tag=AC56_RS18585;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_000087947.1;transl_table=11
NZ_JJLS01000128.1	RefSeq	gene	10872	12545	.	-	.	ID=gene-AC56_RS18580;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=AC56_RS18580;old_locus_tag=AC56_0720
NZ_JJLS01000128.1	Protein Homology	CDS	10872	12545	.	-	0	ID=cds-WP_000741131.1;Parent=gene-AC56_RS18580;Dbxref=GenBank:WP_000741131.1;Name=WP_000741131.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415226.1;locus_tag=AC56_RS18580;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_000741131.1;transl_table=11
NZ_JJLS01000128.1	RefSeq	gene	12545	12634	.	-	.	ID=gene-AC56_RS0125350;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=AC56_RS0125350
NZ_JJLS01000128.1	Protein Homology	CDS	12545	12634	.	-	0	ID=cds-WP_001272653.1;Parent=gene-AC56_RS0125350;Dbxref=GenBank:WP_001272653.1;Name=WP_001272653.1;gbkey=CDS;gene=kdpF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588443.1;locus_tag=AC56_RS0125350;product=K(+)-transporting ATPase subunit F;protein_id=WP_001272653.1;transl_table=11
NZ_JJLS01000128.1	RefSeq	gene	12947	13153	.	+	.	ID=gene-AC56_RS18575;Name=ybfA;gbkey=Gene;gene=ybfA;gene_biotype=protein_coding;locus_tag=AC56_RS18575;old_locus_tag=AC56_0722
NZ_JJLS01000128.1	Protein Homology	CDS	12947	13153	.	+	0	ID=cds-WP_000424924.1;Parent=gene-AC56_RS18575;Dbxref=GenBank:WP_000424924.1;Name=WP_000424924.1;gbkey=CDS;gene=ybfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308755.1;locus_tag=AC56_RS18575;product=YbfA family protein;protein_id=WP_000424924.1;transl_table=11
NZ_JJLS01000128.1	RefSeq	pseudogene	13396	15794	.	+	.	ID=gene-AC56_RS18570;Name=rhsB;end_range=15794,.;gbkey=Gene;gene=rhsB;gene_biotype=pseudogene;locus_tag=AC56_RS18570;old_locus_tag=AC56_0723;partial=true;pseudo=true
NZ_JJLS01000128.1	Protein Homology	CDS	13396	15794	.	+	0	ID=cds-AC56_RS18570;Parent=gene-AC56_RS18570;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=15794,.;gbkey=CDS;gene=rhsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418050.1;locus_tag=AC56_RS18570;partial=true;product=rhs element protein RhsB;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000129.1 1 3119
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000129.1	RefSeq	region	1	3119	.	+	.	ID=NZ_JJLS01000129.1:1..3119;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000129.1	RefSeq	pseudogene	1	1577	.	+	.	ID=gene-AC56_RS18565;Name=rhsB;gbkey=Gene;gene=rhsB;gene_biotype=pseudogene;locus_tag=AC56_RS18565;old_locus_tag=AC56_0724;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000129.1	Protein Homology	CDS	1	1577	.	+	2	ID=cds-AC56_RS18565;Parent=gene-AC56_RS18565;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=rhsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026224.1;locus_tag=AC56_RS18565;partial=true;product=rhs element protein RhsB;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000129.1	RefSeq	gene	1549	1932	.	+	.	ID=gene-AC56_RS0125355;Name=yhhH;gbkey=Gene;gene=yhhH;gene_biotype=protein_coding;locus_tag=AC56_RS0125355
NZ_JJLS01000129.1	Protein Homology	CDS	1549	1932	.	+	0	ID=cds-WP_032282585.1;Parent=gene-AC56_RS0125355;Dbxref=GenBank:WP_032282585.1;Name=WP_032282585.1;Note=This BlastRule distinguishes YhhH from its paralog YbbC. Both are named for founding members from Escherichia coli K-12%2C and belong Pfam family PF15631.;gbkey=CDS;gene=yhhH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417940.2;locus_tag=AC56_RS0125355;product=protein YhhH;protein_id=WP_032282585.1;transl_table=11
NZ_JJLS01000129.1	RefSeq	pseudogene	2037	2387	.	+	.	ID=gene-AC56_RS0125360;Name=AC56_RS0125360;end_range=2387,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0125360;partial=true;pseudo=true
NZ_JJLS01000129.1	Protein Homology	CDS	2037	2387	.	+	0	ID=cds-AC56_RS0125360;Parent=gene-AC56_RS0125360;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2387,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418051.1;locus_tag=AC56_RS0125360;partial=true;product=HEAT repeat domain-containing protein;pseudo=true;transl_table=11
NZ_JJLS01000129.1	RefSeq	pseudogene	2528	3119	.	+	.	ID=gene-AC56_RS18560;Name=AC56_RS18560;end_range=3119,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS18560;old_locus_tag=AC56_0725;partial=true;pseudo=true
NZ_JJLS01000129.1	Protein Homology	CDS	2528	3119	.	+	0	ID=cds-AC56_RS18560;Parent=gene-AC56_RS18560;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=3119,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AC56_RS18560;partial=true;product=ISAs1-like element ISEc1 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000130.1 1 2854
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000130.1	RefSeq	region	1	2854	.	+	.	ID=NZ_JJLS01000130.1:1..2854;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000130.1	RefSeq	pseudogene	1	2036	.	+	.	ID=gene-AC56_RS18555;Name=rhsC;gbkey=Gene;gene=rhsC;gene_biotype=pseudogene;locus_tag=AC56_RS18555;old_locus_tag=AC56_0726;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000130.1	Protein Homology	CDS	1	2036	.	+	2	ID=cds-AC56_RS18555;Parent=gene-AC56_RS18555;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=rhsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415229.1;locus_tag=AC56_RS18555;partial=true;product=rhs element protein RhsC;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000130.1	RefSeq	pseudogene	2036	2242	.	+	.	ID=gene-AC56_RS0125365;Name=ybfB;end_range=2242,.;gbkey=Gene;gene=ybfB;gene_biotype=pseudogene;locus_tag=AC56_RS0125365;partial=true;pseudo=true
NZ_JJLS01000130.1	Protein Homology	CDS	2036	2242	.	+	0	ID=cds-AC56_RS0125365;Parent=gene-AC56_RS0125365;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2242,.;gbkey=CDS;gene=ybfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415230.1;locus_tag=AC56_RS0125365;partial=true;product=protein YbfB;pseudo=true;transl_table=11
NZ_JJLS01000130.1	RefSeq	pseudogene	2299	2854	.	+	.	ID=gene-AC56_RS18550;Name=AC56_RS18550;end_range=2854,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS18550;old_locus_tag=AC56_0727;partial=true;pseudo=true
NZ_JJLS01000130.1	Protein Homology	CDS	2299	2854	.	+	0	ID=cds-AC56_RS18550;Parent=gene-AC56_RS18550;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;end_range=2854,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS18550;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000131.1 1 2249
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000131.1	RefSeq	region	1	2249	.	+	.	ID=NZ_JJLS01000131.1:1..2249;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000131.1	RefSeq	pseudogene	1	1512	.	+	.	ID=gene-AC56_RS18545;Name=rhsD;end_range=1512,.;gbkey=Gene;gene=rhsD;gene_biotype=pseudogene;locus_tag=AC56_RS18545;old_locus_tag=AC56_0728;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000131.1	Protein Homology	CDS	1	1512	.	+	0	ID=cds-AC56_RS18545;Parent=gene-AC56_RS18545;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1512,.;gbkey=CDS;gene=rhsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415030.1;locus_tag=AC56_RS18545;partial=true;product=rhs element protein RhsD;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000131.1	RefSeq	pseudogene	1658	2249	.	+	.	ID=gene-AC56_RS18540;Name=AC56_RS18540;end_range=2249,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS18540;old_locus_tag=AC56_0729;partial=true;pseudo=true
NZ_JJLS01000131.1	Protein Homology	CDS	1658	2249	.	+	0	ID=cds-AC56_RS18540;Parent=gene-AC56_RS18540;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=2249,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AC56_RS18540;partial=true;product=ISAs1-like element ISEc1 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000132.1 1 11356
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000132.1	RefSeq	region	1	11356	.	+	.	ID=NZ_JJLS01000132.1:1..11356;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000132.1	RefSeq	pseudogene	1	759	.	+	.	ID=gene-AC56_RS18535;Name=ybfD;end_range=759,.;gbkey=Gene;gene=ybfD;gene_biotype=pseudogene;locus_tag=AC56_RS18535;old_locus_tag=AC56_0730;partial=true;pseudo=true
NZ_JJLS01000132.1	Protein Homology	CDS	1	759	.	+	0	ID=cds-AC56_RS18535;Parent=gene-AC56_RS18535;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=759,.;gbkey=CDS;gene=ybfD;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000421020.1;locus_tag=AC56_RS18535;partial=true;product=ISAs1 family transposase;pseudo=true;transl_table=11
NZ_JJLS01000132.1	RefSeq	gene	910	1419	.	+	.	ID=gene-AC56_RS18530;Name=ybgA;gbkey=Gene;gene=ybgA;gene_biotype=protein_coding;locus_tag=AC56_RS18530;old_locus_tag=AC56_0731
NZ_JJLS01000132.1	Protein Homology	CDS	910	1419	.	+	0	ID=cds-WP_032278005.1;Parent=gene-AC56_RS18530;Dbxref=GenBank:WP_032278005.1;Name=WP_032278005.1;gbkey=CDS;gene=ybgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415235.1;locus_tag=AC56_RS18530;product=YbgA family protein;protein_id=WP_032278005.1;transl_table=11
NZ_JJLS01000132.1	RefSeq	gene	1416	2834	.	+	.	ID=gene-AC56_RS18525;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;locus_tag=AC56_RS18525;old_locus_tag=AC56_0732
NZ_JJLS01000132.1	Protein Homology	CDS	1416	2834	.	+	0	ID=cds-WP_000207142.1;Parent=gene-AC56_RS18525;Dbxref=GenBank:WP_000207142.1;Name=WP_000207142.1;gbkey=CDS;gene=phrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415236.1;locus_tag=AC56_RS18525;product=deoxyribodipyrimidine photo-lyase;protein_id=WP_000207142.1;transl_table=11
NZ_JJLS01000132.1	RefSeq	gene	2984	4465	.	-	.	ID=gene-AC56_RS18520;Name=dtpD;gbkey=Gene;gene=dtpD;gene_biotype=protein_coding;locus_tag=AC56_RS18520;old_locus_tag=AC56_0733
NZ_JJLS01000132.1	Protein Homology	CDS	2984	4465	.	-	0	ID=cds-WP_001032689.1;Parent=gene-AC56_RS18520;Dbxref=GenBank:WP_001032689.1;Name=WP_001032689.1;gbkey=CDS;gene=dtpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415237.1;locus_tag=AC56_RS18520;product=dipeptide permease DtpD;protein_id=WP_001032689.1;transl_table=11
NZ_JJLS01000132.1	RefSeq	gene	4736	5479	.	+	.	ID=gene-AC56_RS18515;Name=ybgI;gbkey=Gene;gene=ybgI;gene_biotype=protein_coding;locus_tag=AC56_RS18515;old_locus_tag=AC56_0734
NZ_JJLS01000132.1	Protein Homology	CDS	4736	5479	.	+	0	ID=cds-WP_000798871.1;Parent=gene-AC56_RS18515;Dbxref=GenBank:WP_000798871.1;Name=WP_000798871.1;gbkey=CDS;gene=ybgI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798886.1;locus_tag=AC56_RS18515;product=radiation resistance protein YbgI;protein_id=WP_000798871.1;transl_table=11
NZ_JJLS01000132.1	RefSeq	gene	5502	6158	.	+	.	ID=gene-AC56_RS18510;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=AC56_RS18510;old_locus_tag=AC56_0735
NZ_JJLS01000132.1	Protein Homology	CDS	5502	6158	.	+	0	ID=cds-WP_001188343.1;Parent=gene-AC56_RS18510;Dbxref=GenBank:WP_001188343.1;Name=WP_001188343.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpB;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308763.1;locus_tag=AC56_RS18510;product=5-oxoprolinase subunit PxpB;protein_id=WP_001188343.1;transl_table=11
NZ_JJLS01000132.1	RefSeq	gene	6152	7084	.	+	.	ID=gene-AC56_RS18505;Name=pxpC;gbkey=Gene;gene=pxpC;gene_biotype=protein_coding;locus_tag=AC56_RS18505;old_locus_tag=AC56_0736
NZ_JJLS01000132.1	Protein Homology	CDS	6152	7084	.	+	0	ID=cds-WP_000912724.1;Parent=gene-AC56_RS18505;Dbxref=GenBank:WP_000912724.1;Name=WP_000912724.1;gbkey=CDS;gene=pxpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415240.1;locus_tag=AC56_RS18505;product=5-oxoprolinase subunit PxpC;protein_id=WP_000912724.1;transl_table=11
NZ_JJLS01000132.1	RefSeq	gene	7074	7808	.	+	.	ID=gene-AC56_RS18500;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=AC56_RS18500;old_locus_tag=AC56_0737
NZ_JJLS01000132.1	Protein Homology	CDS	7074	7808	.	+	0	ID=cds-WP_000687130.1;Parent=gene-AC56_RS18500;Dbxref=GenBank:WP_000687130.1;Name=WP_000687130.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415241.1;locus_tag=AC56_RS18500;product=5-oxoprolinase subunit PxpA;protein_id=WP_000687130.1;transl_table=11
NZ_JJLS01000132.1	RefSeq	gene	7844	8635	.	+	.	ID=gene-AC56_RS18495;Name=nei;gbkey=Gene;gene=nei;gene_biotype=protein_coding;locus_tag=AC56_RS18495;old_locus_tag=AC56_0738
NZ_JJLS01000132.1	Protein Homology	CDS	7844	8635	.	+	0	ID=cds-WP_001114026.1;Parent=gene-AC56_RS18495;Dbxref=GenBank:WP_001114026.1;Name=WP_001114026.1;Ontology_term=GO:0006281,GO:0000703,GO:0003677,GO:0008270,GO:0140078;gbkey=CDS;gene=nei;go_function=oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity|0000703||IEA,DNA binding|0003677||IEA,zinc ion binding|0008270||IEA,class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415242.1;locus_tag=AC56_RS18495;product=endonuclease VIII;protein_id=WP_001114026.1;transl_table=11
NZ_JJLS01000132.1	RefSeq	gene	8632	9678	.	-	.	ID=gene-AC56_RS18490;Name=abrB;gbkey=Gene;gene=abrB;gene_biotype=protein_coding;locus_tag=AC56_RS18490;old_locus_tag=AC56_0739
NZ_JJLS01000132.1	Protein Homology	CDS	8632	9678	.	-	0	ID=cds-WP_001297246.1;Parent=gene-AC56_RS18490;Dbxref=GenBank:WP_001297246.1;Name=WP_001297246.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;gene=abrB;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415243.4;locus_tag=AC56_RS18490;product=AbrB family transcriptional regulator;protein_id=WP_001297246.1;transl_table=11
NZ_JJLS01000132.1	RefSeq	pseudogene	9830	10651	.	-	.	ID=gene-AC56_RS31065;Name=AC56_RS31065;end_range=10651,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS31065;partial=true;pseudo=true
NZ_JJLS01000132.1	Protein Homology	CDS	9830	10651	.	-	0	ID=cds-AC56_RS31065;Parent=gene-AC56_RS31065;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=10651,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415244.4;locus_tag=AC56_RS31065;partial=true;product=fimbrial protein;pseudo=true;transl_table=11
NZ_JJLS01000132.1	RefSeq	gene	10661	11356	.	-	.	ID=gene-AC56_RS18485;Name=AC56_RS18485;end_range=11356,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS18485;old_locus_tag=AC56_0741;partial=true
NZ_JJLS01000132.1	Protein Homology	CDS	11109	11356	.	-	1	ID=cds-WP_248790145.1;Parent=gene-AC56_RS18485;Dbxref=GenBank:WP_248790145.1;Name=WP_248790145.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;end_range=11356,.;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS18485;partial=true;product=IS1-like element IS1B family transposase;protein_id=WP_248790145.1;transl_table=11
NZ_JJLS01000132.1	Protein Homology	CDS	10661	11109	.	-	2	ID=cds-WP_248790145.1;Parent=gene-AC56_RS18485;Dbxref=GenBank:WP_248790145.1;Name=WP_248790145.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS18485;partial=true;product=IS1-like element IS1B family transposase;protein_id=WP_248790145.1;transl_table=11
##sequence-region NZ_JJLS01000133.1 1 21561
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000133.1	RefSeq	region	1	21561	.	+	.	ID=NZ_JJLS01000133.1:1..21561;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000133.1	RefSeq	pseudogene	1	572	.	-	.	ID=gene-AC56_RS18480;Name=AC56_RS18480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS18480;old_locus_tag=AC56_0742;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000133.1	Protein Homology	CDS	1	572	.	-	0	ID=cds-AC56_RS18480;Parent=gene-AC56_RS18480;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS18480;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000133.1	RefSeq	pseudogene	628	882	.	-	.	ID=gene-AC56_RS18475;Name=AC56_RS18475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS18475;old_locus_tag=AC56_0743;partial=true;pseudo=true;start_range=.,628
NZ_JJLS01000133.1	Protein Homology	CDS	628	882	.	-	0	ID=cds-AC56_RS18475;Parent=gene-AC56_RS18475;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415244.4;locus_tag=AC56_RS18475;partial=true;product=type 1 fimbrial protein;pseudo=true;start_range=.,628;transl_table=11
NZ_JJLS01000133.1	RefSeq	gene	879	1610	.	-	.	ID=gene-AC56_RS18470;Name=ybgP;gbkey=Gene;gene=ybgP;gene_biotype=protein_coding;locus_tag=AC56_RS18470;old_locus_tag=AC56_0744
NZ_JJLS01000133.1	Protein Homology	CDS	879	1610	.	-	0	ID=cds-WP_000143530.1;Parent=gene-AC56_RS18470;Dbxref=GenBank:WP_000143530.1;Name=WP_000143530.1;Ontology_term=GO:0043711,GO:0061077,GO:0030288;gbkey=CDS;gene=ybgP;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=pilus organization|0043711||IEA,chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706517.2;locus_tag=AC56_RS18470;product=fimbrial biogenesis chaperone;protein_id=WP_000143530.1;transl_table=11
NZ_JJLS01000133.1	RefSeq	gene	1625	4084	.	-	.	ID=gene-AC56_RS18465;Name=ybgQ;gbkey=Gene;gene=ybgQ;gene_biotype=protein_coding;locus_tag=AC56_RS18465;old_locus_tag=AC56_0745
NZ_JJLS01000133.1	Protein Homology	CDS	1625	4084	.	-	0	ID=cds-WP_012304901.1;Parent=gene-AC56_RS18465;Dbxref=GenBank:WP_012304901.1;Name=WP_012304901.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;gene=ybgQ;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706516.2;locus_tag=AC56_RS18465;product=fimbria/pilus outer membrane usher protein;protein_id=WP_012304901.1;transl_table=11
NZ_JJLS01000133.1	RefSeq	gene	4135	4701	.	-	.	ID=gene-AC56_RS18460;Name=AC56_RS18460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS18460;old_locus_tag=AC56_0746
NZ_JJLS01000133.1	Protein Homology	CDS	4135	4701	.	-	0	ID=cds-WP_000472422.1;Parent=gene-AC56_RS18460;Dbxref=GenBank:WP_000472422.1;Name=WP_000472422.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706515.1;locus_tag=AC56_RS18460;product=fimbrial protein;protein_id=WP_000472422.1;transl_table=11
NZ_JJLS01000133.1	RefSeq	gene	5090	6373	.	-	.	ID=gene-AC56_RS18455;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=AC56_RS18455;old_locus_tag=AC56_0747
NZ_JJLS01000133.1	Protein Homology	CDS	5090	6373	.	-	0	ID=cds-WP_000785834.1;Parent=gene-AC56_RS18455;Dbxref=GenBank:WP_000785834.1;Name=WP_000785834.1;Ontology_term=GO:0006099,GO:0004108,GO:0005737;gbkey=CDS;gene=gltA;go_component=cytoplasm|0005737||IEA;go_function=citrate (Si)-synthase activity|0004108||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415248.1;locus_tag=AC56_RS18455;product=citrate synthase;protein_id=WP_000785834.1;transl_table=11
NZ_JJLS01000133.1	RefSeq	gene	6579	6686	.	-	.	ID=gene-AC56_RS32660;Name=AC56_RS32660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS32660
NZ_JJLS01000133.1	Protein Homology	CDS	6579	6686	.	-	0	ID=cds-WP_001305582.1;Parent=gene-AC56_RS32660;Dbxref=GenBank:WP_001305582.1;Name=WP_001305582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518759.1;locus_tag=AC56_RS32660;product=hypothetical protein;protein_id=WP_001305582.1;transl_table=11
NZ_JJLS01000133.1	RefSeq	gene	7067	7471	.	+	.	ID=gene-AC56_RS0125385;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA,dhsC;locus_tag=AC56_RS0125385;old_locus_tag=AC56_0748
NZ_JJLS01000133.1	Protein Homology	CDS	7067	7471	.	+	0	ID=cds-WP_000263347.1;Parent=gene-AC56_RS0125385;Dbxref=GenBank:WP_000263347.1;Name=WP_000263347.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0016020,GO:0045273;gbkey=CDS;gene=sdhC;go_component=membrane|0016020||IEA,respiratory chain complex II (succinate dehydrogenase)|0045273||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000263334.1;locus_tag=AC56_RS0125385;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=WP_000263347.1;transl_table=11
NZ_JJLS01000133.1	RefSeq	gene	7465	7812	.	+	.	ID=gene-AC56_RS18450;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;gene_synonym=cybS,dhsD;locus_tag=AC56_RS18450;old_locus_tag=AC56_0749
NZ_JJLS01000133.1	Protein Homology	CDS	7465	7812	.	+	0	ID=cds-WP_000254365.1;Parent=gene-AC56_RS18450;Dbxref=GenBank:WP_000254365.1;Name=WP_000254365.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415250.1;locus_tag=AC56_RS18450;product=succinate dehydrogenase membrane anchor subunit;protein_id=WP_000254365.1;transl_table=11
NZ_JJLS01000133.1	RefSeq	gene	7812	9578	.	+	.	ID=gene-AC56_RS18445;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=AC56_RS18445;old_locus_tag=AC56_0750
NZ_JJLS01000133.1	Protein Homology	CDS	7812	9578	.	+	0	ID=cds-WP_000775540.1;Parent=gene-AC56_RS18445;Dbxref=GenBank:WP_000775540.1;Name=WP_000775540.1;Ontology_term=GO:0006099,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122549.1;locus_tag=AC56_RS18445;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_000775540.1;transl_table=11
NZ_JJLS01000133.1	RefSeq	gene	9594	10310	.	+	.	ID=gene-AC56_RS18440;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=AC56_RS18440;old_locus_tag=AC56_0751
NZ_JJLS01000133.1	Protein Homology	CDS	9594	10310	.	+	0	ID=cds-WP_001235263.1;Parent=gene-AC56_RS18440;Dbxref=GenBank:WP_001235263.1;Name=WP_001235263.1;gbkey=CDS;gene=sdhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133276.1;locus_tag=AC56_RS18440;product=succinate dehydrogenase iron-sulfur subunit SdhB;protein_id=WP_001235263.1;transl_table=11
NZ_JJLS01000133.1	RefSeq	gene	10511	13312	.	+	.	ID=gene-AC56_RS18435;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=AC56_RS18435;old_locus_tag=AC56_0752
NZ_JJLS01000133.1	Protein Homology	CDS	10511	13312	.	+	0	ID=cds-WP_001396949.1;Parent=gene-AC56_RS18435;Dbxref=GenBank:WP_001396949.1;Name=WP_001396949.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976,GO:0045252;gbkey=CDS;gene=sucA;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308778.1;locus_tag=AC56_RS18435;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_001396949.1;transl_table=11
NZ_JJLS01000133.1	RefSeq	gene	13327	14544	.	+	.	ID=gene-AC56_RS18430;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=AC56_RS18430;old_locus_tag=AC56_0753
NZ_JJLS01000133.1	Protein Homology	CDS	13327	14544	.	+	0	ID=cds-WP_000099823.1;Parent=gene-AC56_RS18430;Dbxref=GenBank:WP_000099823.1;Name=WP_000099823.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308779.1;locus_tag=AC56_RS18430;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_000099823.1;transl_table=11
NZ_JJLS01000133.1	RefSeq	gene	14910	16076	.	+	.	ID=gene-AC56_RS18425;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=AC56_RS18425;old_locus_tag=AC56_0754
NZ_JJLS01000133.1	Protein Homology	CDS	14910	16076	.	+	0	ID=cds-WP_023154116.1;Parent=gene-AC56_RS18425;Dbxref=GenBank:WP_023154116.1;Name=WP_023154116.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=AC56_RS18425;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_023154116.1;transl_table=11
NZ_JJLS01000133.1	RefSeq	gene	16076	16945	.	+	.	ID=gene-AC56_RS18420;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=AC56_RS18420;old_locus_tag=AC56_0755
NZ_JJLS01000133.1	Protein Homology	CDS	16076	16945	.	+	0	ID=cds-WP_001391198.1;Parent=gene-AC56_RS18420;Dbxref=GenBank:WP_001391198.1;Name=WP_001391198.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308781.1;locus_tag=AC56_RS18420;product=succinate--CoA ligase subunit alpha;protein_id=WP_001391198.1;transl_table=11
NZ_JJLS01000133.1	RefSeq	gene	17049	17771	.	-	.	ID=gene-AC56_RS18415;Name=mngR;gbkey=Gene;gene=mngR;gene_biotype=protein_coding;locus_tag=AC56_RS18415;old_locus_tag=AC56_0756
NZ_JJLS01000133.1	Protein Homology	CDS	17049	17771	.	-	0	ID=cds-WP_000509900.1;Parent=gene-AC56_RS18415;Dbxref=GenBank:WP_000509900.1;Name=WP_000509900.1;gbkey=CDS;gene=mngR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415258.1;locus_tag=AC56_RS18415;product=mannosyl-D-glycerate transport/metabolism system transcriptional repressor MngR;protein_id=WP_000509900.1;transl_table=11
NZ_JJLS01000133.1	RefSeq	gene	17940	19856	.	+	.	ID=gene-AC56_RS18410;Name=mngA;gbkey=Gene;gene=mngA;gene_biotype=protein_coding;locus_tag=AC56_RS18410;old_locus_tag=AC56_0757
NZ_JJLS01000133.1	Protein Homology	CDS	17940	19856	.	+	0	ID=cds-WP_032278011.1;Parent=gene-AC56_RS18410;Dbxref=GenBank:WP_032278011.1;Name=WP_032278011.1;Ontology_term=GO:0009401,GO:0005351,GO:0022877,GO:0016020;gbkey=CDS;gene=mngA;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001393949.1;locus_tag=AC56_RS18410;product=PTS 2-O-a-mannosyl-D-glycerate transporter subunit IIABC;protein_id=WP_032278011.1;transl_table=11
NZ_JJLS01000133.1	RefSeq	pseudogene	19874	21181	.	+	.	ID=gene-AC56_RS18405;Name=AC56_RS18405;end_range=21181,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS18405;old_locus_tag=AC56_0758;partial=true;pseudo=true
NZ_JJLS01000133.1	Protein Homology	CDS	19874	21181	.	+	0	ID=cds-AC56_RS18405;Parent=gene-AC56_RS18405;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=21181,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415260.1;locus_tag=AC56_RS18405;partial=true;product=alpha-mannosidase;pseudo=true;transl_table=11
NZ_JJLS01000133.1	RefSeq	gene	21130	21348	.	-	.	ID=gene-AC56_RS33705;Name=AC56_RS33705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33705
NZ_JJLS01000133.1	Protein Homology	CDS	21130	21348	.	-	0	ID=cds-WP_315747924.1;Parent=gene-AC56_RS33705;Dbxref=GenBank:WP_315747924.1;Name=WP_315747924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001340454.1;locus_tag=AC56_RS33705;product=hypothetical protein;protein_id=WP_315747924.1;transl_table=11
NZ_JJLS01000133.1	RefSeq	gene	21330	21561	.	-	.	ID=gene-AC56_RS18400;Name=AC56_RS18400;end_range=21561,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS18400;old_locus_tag=AC56_0759;partial=true
NZ_JJLS01000133.1	Protein Homology	CDS	21330	21561	.	-	1	ID=cds-WP_032282465.1-2;Parent=gene-AC56_RS18400;Dbxref=GenBank:WP_032282465.1;Name=WP_032282465.1;end_range=21561,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS18400;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032282465.1;transl_table=11
##sequence-region NZ_JJLS01000134.1 1 11873
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000134.1	RefSeq	region	1	11873	.	+	.	ID=NZ_JJLS01000134.1:1..11873;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000134.1	RefSeq	pseudogene	1	466	.	-	.	ID=gene-AC56_RS18395;Name=AC56_RS18395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS18395;old_locus_tag=AC56_0760;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000134.1	Protein Homology	CDS	1	466	.	-	0	ID=cds-AC56_RS18395;Parent=gene-AC56_RS18395;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS18395;partial=true;product=IS5-like element ISKpn26 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000134.1	RefSeq	pseudogene	529	1863	.	+	.	ID=gene-AC56_RS18390;Name=AC56_RS18390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS18390;old_locus_tag=AC56_0761;partial=true;pseudo=true;start_range=.,529
NZ_JJLS01000134.1	Protein Homology	CDS	529	1863	.	+	0	ID=cds-AC56_RS18390;Parent=gene-AC56_RS18390;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006013,GO:0004559;gbkey=CDS;go_function=alpha-mannosidase activity|0004559||IEA;go_process=mannose metabolic process|0006013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415260.1;locus_tag=AC56_RS18390;partial=true;product=glycoside hydrolase family 38 C-terminal domain-containing protein;pseudo=true;start_range=.,529;transl_table=11
NZ_JJLS01000134.1	RefSeq	gene	1888	2115	.	+	.	ID=gene-AC56_RS18385;Name=AC56_RS18385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS18385;old_locus_tag=AC56_0762
NZ_JJLS01000134.1	GeneMarkS-2+	CDS	1888	2115	.	+	0	ID=cds-WP_032177050.1;Parent=gene-AC56_RS18385;Dbxref=GenBank:WP_032177050.1;Name=WP_032177050.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS18385;product=hypothetical protein;protein_id=WP_032177050.1;transl_table=11
NZ_JJLS01000134.1	RefSeq	gene	2710	4278	.	+	.	ID=gene-AC56_RS18380;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=AC56_RS18380;old_locus_tag=AC56_0763
NZ_JJLS01000134.1	Protein Homology	CDS	2710	4278	.	+	0	ID=cds-WP_000884361.1;Parent=gene-AC56_RS18380;Dbxref=GenBank:WP_000884361.1;Name=WP_000884361.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;gene=cydA;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415261.2;locus_tag=AC56_RS18380;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_000884361.1;transl_table=11
NZ_JJLS01000134.1	RefSeq	gene	4294	5433	.	+	.	ID=gene-AC56_RS18375;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=AC56_RS18375;old_locus_tag=AC56_0764
NZ_JJLS01000134.1	Protein Homology	CDS	4294	5433	.	+	0	ID=cds-WP_032278014.1;Parent=gene-AC56_RS18375;Dbxref=GenBank:WP_032278014.1;Name=WP_032278014.1;Ontology_term=GO:0016020;gbkey=CDS;gene=cydB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568269.1;locus_tag=AC56_RS18375;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_032278014.1;transl_table=11
NZ_JJLS01000134.1	RefSeq	gene	5448	5561	.	+	.	ID=gene-AC56_RS18370;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;locus_tag=AC56_RS18370;old_locus_tag=AC56_0765
NZ_JJLS01000134.1	Protein Homology	CDS	5448	5561	.	+	0	ID=cds-WP_000270282.1;Parent=gene-AC56_RS18370;Dbxref=GenBank:WP_000270282.1;Name=WP_000270282.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588444.1;locus_tag=AC56_RS18370;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_000270282.1;transl_table=11
NZ_JJLS01000134.1	RefSeq	gene	5561	5854	.	+	.	ID=gene-AC56_RS18365;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=protein_coding;locus_tag=AC56_RS18365;old_locus_tag=AC56_0766
NZ_JJLS01000134.1	Protein Homology	CDS	5561	5854	.	+	0	ID=cds-WP_000034802.1;Parent=gene-AC56_RS18365;Dbxref=GenBank:WP_000034802.1;Name=WP_000034802.1;gbkey=CDS;gene=ybgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308797.1;locus_tag=AC56_RS18365;product=cyd operon protein YbgE;protein_id=WP_000034802.1;transl_table=11
NZ_JJLS01000134.1	RefSeq	gene	6004	6408	.	+	.	ID=gene-AC56_RS18360;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=AC56_RS18360;old_locus_tag=AC56_0767
NZ_JJLS01000134.1	Protein Homology	CDS	6004	6408	.	+	0	ID=cds-WP_001098384.1;Parent=gene-AC56_RS18360;Dbxref=GenBank:WP_001098384.1;Name=WP_001098384.1;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308798.1;locus_tag=AC56_RS18360;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_001098384.1;transl_table=11
NZ_JJLS01000134.1	RefSeq	gene	6405	7097	.	+	.	ID=gene-AC56_RS18355;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=AC56_RS18355;old_locus_tag=AC56_0768
NZ_JJLS01000134.1	Protein Homology	CDS	6405	7097	.	+	0	ID=cds-WP_000131314.1;Parent=gene-AC56_RS18355;Dbxref=GenBank:WP_000131314.1;Name=WP_000131314.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308799.1;locus_tag=AC56_RS18355;product=Tol-Pal system protein TolQ;protein_id=WP_000131314.1;transl_table=11
NZ_JJLS01000134.1	RefSeq	gene	7101	7529	.	+	.	ID=gene-AC56_RS18350;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=AC56_RS18350;old_locus_tag=AC56_0769
NZ_JJLS01000134.1	Protein Homology	CDS	7101	7529	.	+	0	ID=cds-WP_000090097.1;Parent=gene-AC56_RS18350;Dbxref=GenBank:WP_000090097.1;Name=WP_000090097.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965300.1;locus_tag=AC56_RS18350;product=colicin uptake protein TolR;protein_id=WP_000090097.1;transl_table=11
NZ_JJLS01000134.1	RefSeq	gene	7594	8859	.	+	.	ID=gene-AC56_RS18345;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=AC56_RS18345;old_locus_tag=AC56_0770
NZ_JJLS01000134.1	Protein Homology	CDS	7594	8859	.	+	0	ID=cds-WP_016246957.1;Parent=gene-AC56_RS18345;Dbxref=GenBank:WP_016246957.1;Name=WP_016246957.1;Ontology_term=GO:0043213,GO:0019534,GO:0016020;gbkey=CDS;gene=tolA;go_component=membrane|0016020||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415267.1;locus_tag=AC56_RS18345;product=cell envelope integrity protein TolA;protein_id=WP_016246957.1;transl_table=11
NZ_JJLS01000134.1	RefSeq	gene	8992	10284	.	+	.	ID=gene-AC56_RS18340;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=AC56_RS18340;old_locus_tag=AC56_0771
NZ_JJLS01000134.1	Protein Homology	CDS	8992	10284	.	+	0	ID=cds-WP_001295307.1;Parent=gene-AC56_RS18340;Dbxref=GenBank:WP_001295307.1;Name=WP_001295307.1;Ontology_term=GO:0017038,GO:0005215,GO:0042597;gbkey=CDS;gene=tolB;go_component=periplasmic space|0042597||IEA;go_function=transporter activity|0005215||IEA;go_process=protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001646851.1;locus_tag=AC56_RS18340;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_001295307.1;transl_table=11
NZ_JJLS01000134.1	RefSeq	gene	10319	10840	.	+	.	ID=gene-AC56_RS18335;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=AC56_RS18335;old_locus_tag=AC56_0772
NZ_JJLS01000134.1	Protein Homology	CDS	10319	10840	.	+	0	ID=cds-WP_001295306.1;Parent=gene-AC56_RS18335;Dbxref=GenBank:WP_001295306.1;Name=WP_001295306.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308803.1;locus_tag=AC56_RS18335;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_001295306.1;transl_table=11
NZ_JJLS01000134.1	RefSeq	gene	10850	11641	.	+	.	ID=gene-AC56_RS18330;Name=cpoB;gbkey=Gene;gene=cpoB;gene_biotype=protein_coding;locus_tag=AC56_RS18330;old_locus_tag=AC56_0773
NZ_JJLS01000134.1	Protein Homology	CDS	10850	11641	.	+	0	ID=cds-WP_000097580.1;Parent=gene-AC56_RS18330;Dbxref=GenBank:WP_000097580.1;Name=WP_000097580.1;Ontology_term=GO:0051301,GO:0070206,GO:0005515;gbkey=CDS;gene=cpoB;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA,protein trimerization|0070206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308804.1;locus_tag=AC56_RS18330;product=cell division protein CpoB;protein_id=WP_000097580.1;transl_table=11
##sequence-region NZ_JJLS01000135.1 1 529
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000135.1	RefSeq	region	1	529	.	+	.	ID=NZ_JJLS01000135.1:1..529;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000135.1	RefSeq	gene	1	125	.	+	.	ID=gene-AC56_RS27895;Name=AC56_RS27895;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AC56_RS27895;partial=true;start_range=.,1
NZ_JJLS01000135.1	cmsearch	ncRNA	1	125	.	+	.	ID=rna-AC56_RS27895;Parent=gene-AC56_RS27895;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS27895;partial=true;product=RtT sRNA;start_range=.,1
NZ_JJLS01000135.1	cmsearch	exon	1	125	.	+	.	ID=exon-AC56_RS27895-1;Parent=rna-AC56_RS27895;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS27895;partial=true;product=RtT sRNA;start_range=.,1
NZ_JJLS01000135.1	RefSeq	gene	161	236	.	+	.	ID=gene-AC56_RS18325;Name=AC56_RS18325;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS18325;old_locus_tag=AC56_0775
NZ_JJLS01000135.1	tRNAscan-SE	tRNA	161	236	.	+	.	ID=rna-AC56_RS18325;Parent=gene-AC56_RS18325;anticodon=(pos:194..196);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS18325;product=tRNA-Val
NZ_JJLS01000135.1	tRNAscan-SE	exon	161	236	.	+	.	ID=exon-AC56_RS18325-1;Parent=rna-AC56_RS18325;anticodon=(pos:194..196);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS18325;product=tRNA-Val
NZ_JJLS01000135.1	RefSeq	gene	240	315	.	+	.	ID=gene-AC56_RS18320;Name=AC56_RS18320;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS18320;old_locus_tag=AC56_0776
NZ_JJLS01000135.1	tRNAscan-SE	tRNA	240	315	.	+	.	ID=rna-AC56_RS18320;Parent=gene-AC56_RS18320;anticodon=(pos:273..275);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS18320;product=tRNA-Lys
NZ_JJLS01000135.1	tRNAscan-SE	exon	240	315	.	+	.	ID=exon-AC56_RS18320-1;Parent=rna-AC56_RS18320;anticodon=(pos:273..275);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS18320;product=tRNA-Lys
##sequence-region NZ_JJLS01000136.1 1 61208
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000136.1	RefSeq	region	1	61208	.	+	.	ID=NZ_JJLS01000136.1:1..61208;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000136.1	RefSeq	pseudogene	1	278	.	+	.	ID=gene-AC56_RS18310;Name=AC56_RS18310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS18310;old_locus_tag=AC56_0778;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000136.1	Protein Homology	CDS	1	278	.	+	2	ID=cds-AC56_RS18310;Parent=gene-AC56_RS18310;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001646851.1;locus_tag=AC56_RS18310;partial=true;product=PD40 domain-containing protein;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	313	834	.	+	.	ID=gene-AC56_RS18305;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=AC56_RS18305;old_locus_tag=AC56_0779
NZ_JJLS01000136.1	Protein Homology	CDS	313	834	.	+	0	ID=cds-WP_001295306.1-2;Parent=gene-AC56_RS18305;Dbxref=GenBank:WP_001295306.1;Name=WP_001295306.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308803.1;locus_tag=AC56_RS18305;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_001295306.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	844	1635	.	+	.	ID=gene-AC56_RS18300;Name=cpoB;gbkey=Gene;gene=cpoB;gene_biotype=protein_coding;locus_tag=AC56_RS18300;old_locus_tag=AC56_0780
NZ_JJLS01000136.1	Protein Homology	CDS	844	1635	.	+	0	ID=cds-WP_000097580.1-2;Parent=gene-AC56_RS18300;Dbxref=GenBank:WP_000097580.1;Name=WP_000097580.1;Ontology_term=GO:0051301,GO:0070206,GO:0005515;gbkey=CDS;gene=cpoB;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA,protein trimerization|0070206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308804.1;locus_tag=AC56_RS18300;product=cell division protein CpoB;protein_id=WP_000097580.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	1800	1875	.	+	.	ID=gene-AC56_RS18295;Name=AC56_RS18295;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS18295;old_locus_tag=AC56_0781
NZ_JJLS01000136.1	tRNAscan-SE	tRNA	1800	1875	.	+	.	ID=rna-AC56_RS18295;Parent=gene-AC56_RS18295;anticodon=(pos:1833..1835);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS18295;product=tRNA-Lys
NZ_JJLS01000136.1	tRNAscan-SE	exon	1800	1875	.	+	.	ID=exon-AC56_RS18295-1;Parent=rna-AC56_RS18295;anticodon=(pos:1833..1835);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS18295;product=tRNA-Lys
NZ_JJLS01000136.1	RefSeq	gene	1927	2002	.	+	.	ID=gene-AC56_RS18290;Name=AC56_RS18290;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS18290;old_locus_tag=AC56_0782
NZ_JJLS01000136.1	tRNAscan-SE	tRNA	1927	2002	.	+	.	ID=rna-AC56_RS18290;Parent=gene-AC56_RS18290;anticodon=(pos:1960..1962);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS18290;product=tRNA-Val
NZ_JJLS01000136.1	tRNAscan-SE	exon	1927	2002	.	+	.	ID=exon-AC56_RS18290-1;Parent=rna-AC56_RS18290;anticodon=(pos:1960..1962);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS18290;product=tRNA-Val
NZ_JJLS01000136.1	RefSeq	gene	2006	2081	.	+	.	ID=gene-AC56_RS18285;Name=AC56_RS18285;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS18285;old_locus_tag=AC56_0783
NZ_JJLS01000136.1	tRNAscan-SE	tRNA	2006	2081	.	+	.	ID=rna-AC56_RS18285;Parent=gene-AC56_RS18285;anticodon=(pos:2039..2041);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS18285;product=tRNA-Lys
NZ_JJLS01000136.1	tRNAscan-SE	exon	2006	2081	.	+	.	ID=exon-AC56_RS18285-1;Parent=rna-AC56_RS18285;anticodon=(pos:2039..2041);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS18285;product=tRNA-Lys
NZ_JJLS01000136.1	RefSeq	gene	2228	2303	.	+	.	ID=gene-AC56_RS18280;Name=AC56_RS18280;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS18280;old_locus_tag=AC56_0784
NZ_JJLS01000136.1	tRNAscan-SE	tRNA	2228	2303	.	+	.	ID=rna-AC56_RS18280;Parent=gene-AC56_RS18280;anticodon=(pos:2261..2263);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS18280;product=tRNA-Lys
NZ_JJLS01000136.1	tRNAscan-SE	exon	2228	2303	.	+	.	ID=exon-AC56_RS18280-1;Parent=rna-AC56_RS18280;anticodon=(pos:2261..2263);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS18280;product=tRNA-Lys
NZ_JJLS01000136.1	RefSeq	gene	2436	2511	.	+	.	ID=gene-AC56_RS18275;Name=AC56_RS18275;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS18275;old_locus_tag=AC56_0785
NZ_JJLS01000136.1	tRNAscan-SE	tRNA	2436	2511	.	+	.	ID=rna-AC56_RS18275;Parent=gene-AC56_RS18275;anticodon=(pos:2469..2471);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS18275;product=tRNA-Lys
NZ_JJLS01000136.1	tRNAscan-SE	exon	2436	2511	.	+	.	ID=exon-AC56_RS18275-1;Parent=rna-AC56_RS18275;anticodon=(pos:2469..2471);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS18275;product=tRNA-Lys
NZ_JJLS01000136.1	RefSeq	gene	2789	3832	.	+	.	ID=gene-AC56_RS18270;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=AC56_RS18270;old_locus_tag=AC56_0786
NZ_JJLS01000136.1	Protein Homology	CDS	2789	3832	.	+	0	ID=cds-WP_000115290.1;Parent=gene-AC56_RS18270;Dbxref=GenBank:WP_000115290.1;Name=WP_000115290.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415271.1;locus_tag=AC56_RS18270;product=quinolinate synthase NadA;protein_id=WP_000115290.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	3870	4589	.	+	.	ID=gene-AC56_RS18265;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=AC56_RS18265;old_locus_tag=AC56_0787
NZ_JJLS01000136.1	Protein Homology	CDS	3870	4589	.	+	0	ID=cds-WP_000345410.1;Parent=gene-AC56_RS18265;Dbxref=GenBank:WP_000345410.1;Name=WP_000345410.1;gbkey=CDS;gene=pnuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415272.1;locus_tag=AC56_RS18265;product=nicotinamide riboside transporter PnuC;protein_id=WP_000345410.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	4586	5527	.	-	.	ID=gene-AC56_RS18260;Name=zitB;gbkey=Gene;gene=zitB;gene_biotype=protein_coding;locus_tag=AC56_RS18260;old_locus_tag=AC56_0788
NZ_JJLS01000136.1	Protein Homology	CDS	4586	5527	.	-	0	ID=cds-WP_032278018.1;Parent=gene-AC56_RS18260;Dbxref=GenBank:WP_032278018.1;Name=WP_032278018.1;Ontology_term=GO:0006829,GO:0055085,GO:0005385,GO:0016020;gbkey=CDS;gene=zitB;go_component=membrane|0016020||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transport|0006829||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415273.1;locus_tag=AC56_RS18260;product=CDF family zinc transporter ZitB;protein_id=WP_032278018.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	5641	6021	.	-	.	ID=gene-AC56_RS18255;Name=ybgS;gbkey=Gene;gene=ybgS;gene_biotype=protein_coding;locus_tag=AC56_RS18255;old_locus_tag=AC56_0789
NZ_JJLS01000136.1	Protein Homology	CDS	5641	6021	.	-	0	ID=cds-WP_000784351.1;Parent=gene-AC56_RS18255;Dbxref=GenBank:WP_000784351.1;Name=WP_000784351.1;gbkey=CDS;gene=ybgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415274.1;locus_tag=AC56_RS18255;product=YbgS-like family protein;protein_id=WP_000784351.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	6337	7389	.	+	.	ID=gene-AC56_RS18250;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=AC56_RS18250;old_locus_tag=AC56_0790
NZ_JJLS01000136.1	Protein Homology	CDS	6337	7389	.	+	0	ID=cds-WP_001109196.1;Parent=gene-AC56_RS18250;Dbxref=GenBank:WP_001109196.1;Name=WP_001109196.1;gbkey=CDS;gene=aroG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109196.1;locus_tag=AC56_RS18250;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=WP_001109196.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	7547	8299	.	-	.	ID=gene-AC56_RS18245;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=AC56_RS18245;old_locus_tag=AC56_0791
NZ_JJLS01000136.1	Protein Homology	CDS	7547	8299	.	-	0	ID=cds-WP_001295305.1;Parent=gene-AC56_RS18245;Dbxref=GenBank:WP_001295305.1;Name=WP_001295305.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=AC56_RS18245;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_001295305.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	8501	9541	.	-	.	ID=gene-AC56_RS18240;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=AC56_RS18240;old_locus_tag=AC56_0793
NZ_JJLS01000136.1	Protein Homology	CDS	8501	9541	.	-	0	ID=cds-WP_000931389.1;Parent=gene-AC56_RS18240;Dbxref=GenBank:WP_000931389.1;Name=WP_000931389.1;Ontology_term=GO:0006012,GO:0004034;gbkey=CDS;gene=galM;go_function=aldose 1-epimerase activity|0004034||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415277.1;locus_tag=AC56_RS18240;product=galactose-1-epimerase;protein_id=WP_000931389.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	9535	10683	.	-	.	ID=gene-AC56_RS18235;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=AC56_RS18235;old_locus_tag=AC56_0794
NZ_JJLS01000136.1	Protein Homology	CDS	9535	10683	.	-	0	ID=cds-WP_032278020.1;Parent=gene-AC56_RS18235;Dbxref=GenBank:WP_032278020.1;Name=WP_032278020.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001713229.1;locus_tag=AC56_RS18235;product=galactokinase;protein_id=WP_032278020.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	10687	11733	.	-	.	ID=gene-AC56_RS18230;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=AC56_RS18230;old_locus_tag=AC56_0795
NZ_JJLS01000136.1	Protein Homology	CDS	10687	11733	.	-	0	ID=cds-WP_000191497.1;Parent=gene-AC56_RS18230;Dbxref=GenBank:WP_000191497.1;Name=WP_000191497.1;Ontology_term=GO:0006012,GO:0008108,GO:0008270;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA,zinc ion binding|0008270||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415279.1;locus_tag=AC56_RS18230;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_000191497.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	11743	12759	.	-	.	ID=gene-AC56_RS18225;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=AC56_RS18225;old_locus_tag=AC56_0796
NZ_JJLS01000136.1	Protein Homology	CDS	11743	12759	.	-	0	ID=cds-WP_032278021.1;Parent=gene-AC56_RS18225;Dbxref=GenBank:WP_032278021.1;Name=WP_032278021.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415280.3;locus_tag=AC56_RS18225;product=UDP-glucose 4-epimerase GalE;protein_id=WP_032278021.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	13020	14492	.	-	.	ID=gene-AC56_RS18220;Name=modF;gbkey=Gene;gene=modF;gene_biotype=protein_coding;locus_tag=AC56_RS18220;old_locus_tag=AC56_0797
NZ_JJLS01000136.1	Protein Homology	CDS	13020	14492	.	-	0	ID=cds-WP_000096875.1;Parent=gene-AC56_RS18220;Dbxref=GenBank:WP_000096875.1;Name=WP_000096875.1;Ontology_term=GO:0005524;gbkey=CDS;gene=modF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415281.1;locus_tag=AC56_RS18220;product=molybdate ABC transporter ATP-binding protein ModF;protein_id=WP_000096875.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	14560	15348	.	-	.	ID=gene-AC56_RS18215;Name=modE;gbkey=Gene;gene=modE;gene_biotype=protein_coding;locus_tag=AC56_RS18215;old_locus_tag=AC56_0798
NZ_JJLS01000136.1	Protein Homology	CDS	14560	15348	.	-	0	ID=cds-WP_001147439.1;Parent=gene-AC56_RS18215;Dbxref=GenBank:WP_001147439.1;Name=WP_001147439.1;Ontology_term=GO:0006355,GO:0015689,GO:0003700,GO:0030151;gbkey=CDS;gene=modE;go_function=DNA-binding transcription factor activity|0003700||IEA,molybdenum ion binding|0030151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308816.1;locus_tag=AC56_RS18215;product=molybdenum-dependent transcriptional regulator;protein_id=WP_001147439.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	15477	15626	.	+	.	ID=gene-AC56_RS18210;Name=acrZ;gbkey=Gene;gene=acrZ;gene_biotype=protein_coding;locus_tag=AC56_RS18210;old_locus_tag=AC56_0799
NZ_JJLS01000136.1	Protein Homology	CDS	15477	15626	.	+	0	ID=cds-WP_000891515.1;Parent=gene-AC56_RS18210;Dbxref=GenBank:WP_000891515.1;Name=WP_000891515.1;gbkey=CDS;gene=acrZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308817.1;locus_tag=AC56_RS18210;product=multidrug efflux pump accessory protein AcrZ;protein_id=WP_000891515.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	15793	16566	.	+	.	ID=gene-AC56_RS18205;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=AC56_RS18205;old_locus_tag=AC56_0800
NZ_JJLS01000136.1	Protein Homology	CDS	15793	16566	.	+	0	ID=cds-WP_000101984.1;Parent=gene-AC56_RS18205;Dbxref=GenBank:WP_000101984.1;Name=WP_000101984.1;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415284.1;locus_tag=AC56_RS18205;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_000101984.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	16566	17255	.	+	.	ID=gene-AC56_RS18200;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=AC56_RS18200;old_locus_tag=AC56_0801
NZ_JJLS01000136.1	Protein Homology	CDS	16566	17255	.	+	0	ID=cds-WP_000604034.1;Parent=gene-AC56_RS18200;Dbxref=GenBank:WP_000604034.1;Name=WP_000604034.1;Ontology_term=GO:0015689,GO:0015098,GO:0016020;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308819.1;locus_tag=AC56_RS18200;product=molybdate ABC transporter permease subunit;protein_id=WP_000604034.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	17258	18316	.	+	.	ID=gene-AC56_RS18195;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=AC56_RS18195;old_locus_tag=AC56_0802
NZ_JJLS01000136.1	Protein Homology	CDS	17258	18316	.	+	0	ID=cds-WP_000891692.1;Parent=gene-AC56_RS18195;Dbxref=GenBank:WP_000891692.1;Name=WP_000891692.1;Ontology_term=GO:0015689,GO:0005524,GO:0015098,GO:0016020;gbkey=CDS;gene=modC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415286.1;locus_tag=AC56_RS18195;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=WP_000891692.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	18317	19135	.	-	.	ID=gene-AC56_RS18190;Name=ybhA;gbkey=Gene;gene=ybhA;gene_biotype=protein_coding;locus_tag=AC56_RS18190;old_locus_tag=AC56_0803
NZ_JJLS01000136.1	Protein Homology	CDS	18317	19135	.	-	0	ID=cds-WP_001300666.1;Parent=gene-AC56_RS18190;Dbxref=GenBank:WP_001300666.1;Name=WP_001300666.1;gbkey=CDS;gene=ybhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415287.1;locus_tag=AC56_RS18190;product=bifunctional pyridoxal phosphate/fructose-1%2C6-bisphosphate phosphatase;protein_id=WP_001300666.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	19290	20285	.	+	.	ID=gene-AC56_RS18185;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;gene_synonym=ybhE;locus_tag=AC56_RS18185;old_locus_tag=AC56_0804
NZ_JJLS01000136.1	Protein Homology	CDS	19290	20285	.	+	0	ID=cds-WP_000815435.1;Parent=gene-AC56_RS18185;Dbxref=GenBank:WP_000815435.1;Name=WP_000815435.1;Ontology_term=GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415288.1;locus_tag=AC56_RS18185;product=6-phosphogluconolactonase;protein_id=WP_000815435.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	20326	21279	.	-	.	ID=gene-AC56_RS18180;Name=ybhD;gbkey=Gene;gene=ybhD;gene_biotype=protein_coding;locus_tag=AC56_RS18180;old_locus_tag=AC56_0805
NZ_JJLS01000136.1	Protein Homology	CDS	20326	21279	.	-	0	ID=cds-WP_000679972.1;Parent=gene-AC56_RS18180;Dbxref=GenBank:WP_000679972.1;Name=WP_000679972.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;gene=ybhD;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308823.3;locus_tag=AC56_RS18180;product=LysR family transcriptional regulator;protein_id=WP_000679972.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	21473	22516	.	+	.	ID=gene-AC56_RS18175;Name=ybhH;gbkey=Gene;gene=ybhH;gene_biotype=protein_coding;locus_tag=AC56_RS18175;old_locus_tag=AC56_0807
NZ_JJLS01000136.1	Protein Homology	CDS	21473	22516	.	+	0	ID=cds-WP_255065563.1;Parent=gene-AC56_RS18175;Dbxref=GenBank:WP_255065563.1;Name=WP_255065563.1;gbkey=CDS;gene=ybhH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415290.1;locus_tag=AC56_RS18175;product=4-oxalomesaconate tautomerase;protein_id=WP_255065563.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	22592	24025	.	+	.	ID=gene-AC56_RS18170;Name=ybhI;gbkey=Gene;gene=ybhI;gene_biotype=protein_coding;locus_tag=AC56_RS18170;old_locus_tag=AC56_0808
NZ_JJLS01000136.1	Protein Homology	CDS	22592	24025	.	+	0	ID=cds-WP_001036475.1;Parent=gene-AC56_RS18170;Dbxref=GenBank:WP_001036475.1;Name=WP_001036475.1;Ontology_term=GO:0022857,GO:0005886;gbkey=CDS;gene=ybhI;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415291.1;locus_tag=AC56_RS18170;product=anion permease;protein_id=WP_001036475.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	24208	26469	.	+	.	ID=gene-AC56_RS18165;Name=ybhJ;gbkey=Gene;gene=ybhJ;gene_biotype=protein_coding;locus_tag=AC56_RS18165;old_locus_tag=AC56_0809
NZ_JJLS01000136.1	Protein Homology	CDS	24208	26469	.	+	0	ID=cds-WP_000593906.1;Parent=gene-AC56_RS18165;Dbxref=GenBank:WP_000593906.1;Name=WP_000593906.1;gbkey=CDS;gene=ybhJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415292.2;locus_tag=AC56_RS18165;product=hydratase;protein_id=WP_000593906.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	26703	27986	.	-	.	ID=gene-AC56_RS18160;Name=ybhC;gbkey=Gene;gene=ybhC;gene_biotype=protein_coding;locus_tag=AC56_RS18160;old_locus_tag=AC56_0810
NZ_JJLS01000136.1	Protein Homology	CDS	26703	27986	.	-	0	ID=cds-WP_001091587.1;Parent=gene-AC56_RS18160;Dbxref=GenBank:WP_001091587.1;Name=WP_001091587.1;Ontology_term=GO:0042545,GO:0030599;gbkey=CDS;gene=ybhC;go_function=pectinesterase activity|0030599||IEA;go_process=cell wall modification|0042545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415293.1;locus_tag=AC56_RS18160;product=putative acyl-CoA thioester hydrolase;protein_id=WP_001091587.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	28138	28614	.	-	.	ID=gene-AC56_RS18155;Name=ybhB;gbkey=Gene;gene=ybhB;gene_biotype=protein_coding;locus_tag=AC56_RS18155;old_locus_tag=AC56_0811
NZ_JJLS01000136.1	Protein Homology	CDS	28138	28614	.	-	0	ID=cds-WP_000767389.1;Parent=gene-AC56_RS18155;Dbxref=GenBank:WP_000767389.1;Name=WP_000767389.1;gbkey=CDS;gene=ybhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415294.1;locus_tag=AC56_RS18155;product=kinase inhibitor;protein_id=WP_000767389.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	28673	29962	.	-	.	ID=gene-AC56_RS18150;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=AC56_RS18150;old_locus_tag=AC56_0812
NZ_JJLS01000136.1	Protein Homology	CDS	28673	29962	.	-	0	ID=cds-WP_001300379.1;Parent=gene-AC56_RS18150;Dbxref=GenBank:WP_001300379.1;Name=WP_001300379.1;Ontology_term=GO:0009102,GO:0004015,GO:0030170;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415295.1;locus_tag=AC56_RS18150;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_001300379.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	30049	31089	.	+	.	ID=gene-AC56_RS18145;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=AC56_RS18145;old_locus_tag=AC56_0813
NZ_JJLS01000136.1	Protein Homology	CDS	30049	31089	.	+	0	ID=cds-WP_000951213.1;Parent=gene-AC56_RS18145;Dbxref=GenBank:WP_000951213.1;Name=WP_000951213.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415296.1;locus_tag=AC56_RS18145;product=biotin synthase BioB;protein_id=WP_000951213.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	31086	32240	.	+	.	ID=gene-AC56_RS18140;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=AC56_RS18140;old_locus_tag=AC56_0814
NZ_JJLS01000136.1	Protein Homology	CDS	31086	32240	.	+	0	ID=cds-WP_000118797.1;Parent=gene-AC56_RS18140;Dbxref=GenBank:WP_000118797.1;Name=WP_000118797.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308881.1;locus_tag=AC56_RS18140;product=8-amino-7-oxononanoate synthase;protein_id=WP_000118797.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	32227	32982	.	+	.	ID=gene-AC56_RS18135;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=AC56_RS18135;old_locus_tag=AC56_0815
NZ_JJLS01000136.1	Protein Homology	CDS	32227	32982	.	+	0	ID=cds-WP_000246761.1;Parent=gene-AC56_RS18135;Dbxref=GenBank:WP_000246761.1;Name=WP_000246761.1;Ontology_term=GO:0009102,GO:0010340;gbkey=CDS;gene=bioC;go_function=carboxyl-O-methyltransferase activity|0010340||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415298.1;locus_tag=AC56_RS18135;product=malonyl-ACP O-methyltransferase BioC;protein_id=WP_000246761.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	32975	33652	.	+	.	ID=gene-AC56_RS18130;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=AC56_RS18130;old_locus_tag=AC56_0816
NZ_JJLS01000136.1	Protein Homology	CDS	32975	33652	.	+	0	ID=cds-WP_032278022.1;Parent=gene-AC56_RS18130;Dbxref=GenBank:WP_032278022.1;Name=WP_032278022.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415299.1;locus_tag=AC56_RS18130;product=dethiobiotin synthase;protein_id=WP_032278022.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	34231	36252	.	+	.	ID=gene-AC56_RS18125;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=AC56_RS18125;old_locus_tag=AC56_0817
NZ_JJLS01000136.1	Protein Homology	CDS	34231	36252	.	+	0	ID=cds-WP_000042533.1;Parent=gene-AC56_RS18125;Dbxref=GenBank:WP_000042533.1;Name=WP_000042533.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123745.1;locus_tag=AC56_RS18125;product=excinuclease ABC subunit UvrB;protein_id=WP_000042533.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	36444	37352	.	-	.	ID=gene-AC56_RS18120;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=protein_coding;locus_tag=AC56_RS18120;old_locus_tag=AC56_0818
NZ_JJLS01000136.1	Protein Homology	CDS	36444	37352	.	-	0	ID=cds-WP_001295302.1;Parent=gene-AC56_RS18120;Dbxref=GenBank:WP_001295302.1;Name=WP_001295302.1;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415301.1;locus_tag=AC56_RS18120;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;protein_id=WP_001295302.1;transl_table=11
NZ_JJLS01000136.1	cmsearch	riboswitch	37617	37761	.	+	.	ID=id-NZ_JJLS01000136.1:37617..37761;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_JJLS01000136.1	RefSeq	gene	37749	38738	.	+	.	ID=gene-AC56_RS18115;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=AC56_RS18115;old_locus_tag=AC56_0819
NZ_JJLS01000136.1	Protein Homology	CDS	37749	38738	.	+	0	ID=cds-WP_032278024.1;Parent=gene-AC56_RS18115;Dbxref=GenBank:WP_032278024.1;Name=WP_032278024.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308886.1;locus_tag=AC56_RS18115;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_032278024.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	38760	39272	.	+	.	ID=gene-AC56_RS18110;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=AC56_RS18110;old_locus_tag=AC56_0820
NZ_JJLS01000136.1	Protein Homology	CDS	38760	39272	.	+	0	ID=cds-WP_000084639.1;Parent=gene-AC56_RS18110;Dbxref=GenBank:WP_000084639.1;Name=WP_000084639.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaB;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123739.1;locus_tag=AC56_RS18110;product=molybdenum cofactor biosynthesis protein B;protein_id=WP_000084639.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	39275	39760	.	+	.	ID=gene-AC56_RS18105;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=AC56_RS18105;old_locus_tag=AC56_0821
NZ_JJLS01000136.1	Protein Homology	CDS	39275	39760	.	+	0	ID=cds-WP_000080885.1;Parent=gene-AC56_RS18105;Dbxref=GenBank:WP_000080885.1;Name=WP_000080885.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308888.1;locus_tag=AC56_RS18105;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_000080885.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	39753	39998	.	+	.	ID=gene-AC56_RS18100;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=AC56_RS18100;old_locus_tag=AC56_0822
NZ_JJLS01000136.1	Protein Homology	CDS	39753	39998	.	+	0	ID=cds-WP_032278025.1;Parent=gene-AC56_RS18100;Dbxref=GenBank:WP_032278025.1;Name=WP_032278025.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaD;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415305.1;locus_tag=AC56_RS18100;product=molybdopterin synthase sulfur carrier subunit;protein_id=WP_032278025.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	40000	40452	.	+	.	ID=gene-AC56_RS18095;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=AC56_RS18095;old_locus_tag=AC56_0823
NZ_JJLS01000136.1	Protein Homology	CDS	40000	40452	.	+	0	ID=cds-WP_000852297.1;Parent=gene-AC56_RS18095;Dbxref=GenBank:WP_000852297.1;Name=WP_000852297.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaE;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415306.1;locus_tag=AC56_RS18095;product=molybdopterin synthase catalytic subunit MoaE;protein_id=WP_000852297.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	40589	41293	.	+	.	ID=gene-AC56_RS18090;Name=ybhL;gbkey=Gene;gene=ybhL;gene_biotype=protein_coding;locus_tag=AC56_RS18090;old_locus_tag=AC56_0824
NZ_JJLS01000136.1	Protein Homology	CDS	40589	41293	.	+	0	ID=cds-WP_000373624.1;Parent=gene-AC56_RS18090;Dbxref=GenBank:WP_000373624.1;Name=WP_000373624.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ybhL;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415307.1;locus_tag=AC56_RS18090;product=Bax inhibitor-1/YccA family protein;protein_id=WP_000373624.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	41499	42212	.	+	.	ID=gene-AC56_RS18085;Name=ybhM;gbkey=Gene;gene=ybhM;gene_biotype=protein_coding;locus_tag=AC56_RS18085;old_locus_tag=AC56_0825
NZ_JJLS01000136.1	Protein Homology	CDS	41499	42212	.	+	0	ID=cds-WP_032278026.1;Parent=gene-AC56_RS18085;Dbxref=GenBank:WP_032278026.1;Name=WP_032278026.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ybhM;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706665.2;locus_tag=AC56_RS18085;product=Bax inhibitor-1/YccA family protein;protein_id=WP_032278026.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	42248	43204	.	-	.	ID=gene-AC56_RS18080;Name=ybhN;gbkey=Gene;gene=ybhN;gene_biotype=protein_coding;locus_tag=AC56_RS18080;old_locus_tag=AC56_0826
NZ_JJLS01000136.1	Protein Homology	CDS	42248	43204	.	-	0	ID=cds-WP_000045446.1;Parent=gene-AC56_RS18080;Dbxref=GenBank:WP_000045446.1;Name=WP_000045446.1;gbkey=CDS;gene=ybhN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415309.1;locus_tag=AC56_RS18080;product=lysylphosphatidylglycerol synthase domain-containing protein;protein_id=WP_000045446.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	43204	44445	.	-	.	ID=gene-AC56_RS18075;Name=clsB;gbkey=Gene;gene=clsB;gene_biotype=protein_coding;locus_tag=AC56_RS18075;old_locus_tag=AC56_0827
NZ_JJLS01000136.1	Protein Homology	CDS	43204	44445	.	-	0	ID=cds-WP_032278027.1;Parent=gene-AC56_RS18075;Dbxref=GenBank:WP_032278027.1;Name=WP_032278027.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=clsB;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308894.1;locus_tag=AC56_RS18075;product=cardiolipin synthase ClsB;protein_id=WP_032278027.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	44442	45203	.	-	.	ID=gene-AC56_RS18070;Name=ybhP;gbkey=Gene;gene=ybhP;gene_biotype=protein_coding;locus_tag=AC56_RS18070;old_locus_tag=AC56_0828
NZ_JJLS01000136.1	Protein Homology	CDS	44442	45203	.	-	0	ID=cds-WP_001113347.1;Parent=gene-AC56_RS18070;Dbxref=GenBank:WP_001113347.1;Name=WP_001113347.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ybhP;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308895.1;locus_tag=AC56_RS18070;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_001113347.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	45336	45746	.	+	.	ID=gene-AC56_RS18065;Name=ybhQ;gbkey=Gene;gene=ybhQ;gene_biotype=protein_coding;locus_tag=AC56_RS18065;old_locus_tag=AC56_0829
NZ_JJLS01000136.1	Protein Homology	CDS	45336	45746	.	+	0	ID=cds-WP_000871982.1;Parent=gene-AC56_RS18065;Dbxref=GenBank:WP_000871982.1;Name=WP_000871982.1;gbkey=CDS;gene=ybhQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308896.1;locus_tag=AC56_RS18065;product=YbhQ family protein;protein_id=WP_000871982.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	45708	46814	.	-	.	ID=gene-AC56_RS18060;Name=ybhR;gbkey=Gene;gene=ybhR;gene_biotype=protein_coding;locus_tag=AC56_RS18060;old_locus_tag=AC56_0830
NZ_JJLS01000136.1	Protein Homology	CDS	45708	46814	.	-	0	ID=cds-WP_000469031.1;Parent=gene-AC56_RS18060;Dbxref=GenBank:WP_000469031.1;Name=WP_000469031.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;gene=ybhR;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308897.1;locus_tag=AC56_RS18060;product=ABC transporter permease;protein_id=WP_000469031.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	46825	47958	.	-	.	ID=gene-AC56_RS18055;Name=ybhS;gbkey=Gene;gene=ybhS;gene_biotype=protein_coding;locus_tag=AC56_RS18055;old_locus_tag=AC56_0831
NZ_JJLS01000136.1	Protein Homology	CDS	46825	47958	.	-	0	ID=cds-WP_000070131.1;Parent=gene-AC56_RS18055;Dbxref=GenBank:WP_000070131.1;Name=WP_000070131.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;gene=ybhS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308898.1;locus_tag=AC56_RS18055;product=ABC transporter permease;protein_id=WP_000070131.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	47951	49687	.	-	.	ID=gene-AC56_RS18050;Name=ybhF;gbkey=Gene;gene=ybhF;gene_biotype=protein_coding;locus_tag=AC56_RS18050;old_locus_tag=AC56_0832
NZ_JJLS01000136.1	Protein Homology	CDS	47951	49687	.	-	0	ID=cds-WP_000996107.1;Parent=gene-AC56_RS18050;Dbxref=GenBank:WP_000996107.1;Name=WP_000996107.1;Ontology_term=GO:0005524;gbkey=CDS;gene=ybhF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415315.4;locus_tag=AC56_RS18050;product=ATP-binding cassette domain-containing protein;protein_id=WP_000996107.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	49680	50675	.	-	.	ID=gene-AC56_RS18045;Name=hlyD;gbkey=Gene;gene=hlyD;gene_biotype=protein_coding;locus_tag=AC56_RS18045;old_locus_tag=AC56_0833
NZ_JJLS01000136.1	Protein Homology	CDS	49680	50675	.	-	0	ID=cds-WP_000743444.1;Parent=gene-AC56_RS18045;Dbxref=GenBank:WP_000743444.1;Name=WP_000743444.1;gbkey=CDS;gene=hlyD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308900.2;locus_tag=AC56_RS18045;product=secretion protein HlyD;protein_id=WP_000743444.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	50678	51349	.	-	.	ID=gene-AC56_RS18040;Name=cecR;gbkey=Gene;gene=cecR;gene_biotype=protein_coding;locus_tag=AC56_RS18040;old_locus_tag=AC56_0834
NZ_JJLS01000136.1	Protein Homology	CDS	50678	51349	.	-	0	ID=cds-WP_001296991.1;Parent=gene-AC56_RS18040;Dbxref=GenBank:WP_001296991.1;Name=WP_001296991.1;gbkey=CDS;gene=cecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415317.4;locus_tag=AC56_RS18040;product=DNA-binding transcriptional regulator CecR;protein_id=WP_001296991.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	51578	52942	.	+	.	ID=gene-AC56_RS18035;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=AC56_RS18035;old_locus_tag=AC56_0835
NZ_JJLS01000136.1	Protein Homology	CDS	51578	52942	.	+	0	ID=cds-WP_000007101.1;Parent=gene-AC56_RS18035;Dbxref=GenBank:WP_000007101.1;Name=WP_000007101.1;Ontology_term=GO:0003724;gbkey=CDS;gene=rhlE;go_function=RNA helicase activity|0003724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415318.1;locus_tag=AC56_RS18035;product=ATP-dependent RNA helicase RhlE;protein_id=WP_000007101.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	53174	53656	.	-	.	ID=gene-AC56_RS18030;Name=ybiA;gbkey=Gene;gene=ybiA;gene_biotype=protein_coding;locus_tag=AC56_RS18030;old_locus_tag=AC56_0836
NZ_JJLS01000136.1	Protein Homology	CDS	53174	53656	.	-	0	ID=cds-WP_001145126.1;Parent=gene-AC56_RS18030;Dbxref=GenBank:WP_001145126.1;Name=WP_001145126.1;gbkey=CDS;gene=ybiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415319.1;locus_tag=AC56_RS18030;product=N-glycosidase YbiA;protein_id=WP_001145126.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	53776	55926	.	+	.	ID=gene-AC56_RS18025;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=AC56_RS18025;old_locus_tag=AC56_0837
NZ_JJLS01000136.1	Protein Homology	CDS	53776	55926	.	+	0	ID=cds-WP_032278029.1;Parent=gene-AC56_RS18025;Dbxref=GenBank:WP_032278029.1;Name=WP_032278029.1;Ontology_term=GO:0006139,GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=dinG;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415320.1;locus_tag=AC56_RS18025;product=ATP-dependent DNA helicase DinG;protein_id=WP_032278029.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	55954	56916	.	+	.	ID=gene-AC56_RS18020;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=AC56_RS18020;old_locus_tag=AC56_0838
NZ_JJLS01000136.1	Protein Homology	CDS	55954	56916	.	+	0	ID=cds-WP_000386551.1;Parent=gene-AC56_RS18020;Dbxref=GenBank:WP_000386551.1;Name=WP_000386551.1;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415321.1;locus_tag=AC56_RS18020;product=DNA-binding protein YbiB;protein_id=WP_000386551.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	57057	58142	.	+	.	ID=gene-AC56_RS18015;Name=hcxB;gbkey=Gene;gene=hcxB;gene_biotype=protein_coding;locus_tag=AC56_RS18015;old_locus_tag=AC56_0839
NZ_JJLS01000136.1	Protein Homology	CDS	57057	58142	.	+	0	ID=cds-WP_000443530.1;Parent=gene-AC56_RS18015;Dbxref=GenBank:WP_000443530.1;Name=WP_000443530.1;gbkey=CDS;gene=hcxB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415322.1;locus_tag=AC56_RS18015;product=hydroxycarboxylate dehydrogenase HcXB;protein_id=WP_000443530.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	58209	58268	.	+	.	ID=gene-AC56_RS33230;Name=ybiE;gbkey=Gene;gene=ybiE;gene_biotype=protein_coding;locus_tag=AC56_RS33230
NZ_JJLS01000136.1	Protein Homology	CDS	58209	58268	.	+	0	ID=cds-WP_211180490.1;Parent=gene-AC56_RS33230;Dbxref=GenBank:WP_211180490.1;Name=WP_211180490.1;gbkey=CDS;gene=ybiE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051178.1;locus_tag=AC56_RS33230;product=protein YbiE;protein_id=WP_211180490.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	58371	58631	.	-	.	ID=gene-AC56_RS18010;Name=ybiJ;gbkey=Gene;gene=ybiJ;gene_biotype=protein_coding;locus_tag=AC56_RS18010;old_locus_tag=AC56_0840
NZ_JJLS01000136.1	Protein Homology	CDS	58371	58631	.	-	0	ID=cds-WP_000849301.1;Parent=gene-AC56_RS18010;Dbxref=GenBank:WP_000849301.1;Name=WP_000849301.1;gbkey=CDS;gene=ybiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415323.1;locus_tag=AC56_RS18010;product=DUF1471 family protein YbiJ;protein_id=WP_000849301.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	58896	59162	.	-	.	ID=gene-AC56_RS18005;Name=ybiI;gbkey=Gene;gene=ybiI;gene_biotype=protein_coding;locus_tag=AC56_RS18005;old_locus_tag=AC56_0841
NZ_JJLS01000136.1	Protein Homology	CDS	58896	59162	.	-	0	ID=cds-WP_000146343.1;Parent=gene-AC56_RS18005;Dbxref=GenBank:WP_000146343.1;Name=WP_000146343.1;gbkey=CDS;gene=ybiI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415324.1;locus_tag=AC56_RS18005;product=C4-type zinc finger protein YbiI;protein_id=WP_000146343.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	59236	59913	.	-	.	ID=gene-AC56_RS18000;Name=ybiX;gbkey=Gene;gene=ybiX;gene_biotype=protein_coding;locus_tag=AC56_RS18000;old_locus_tag=AC56_0842
NZ_JJLS01000136.1	Protein Homology	CDS	59236	59913	.	-	0	ID=cds-WP_000990177.1;Parent=gene-AC56_RS18000;Dbxref=GenBank:WP_000990177.1;Name=WP_000990177.1;gbkey=CDS;gene=ybiX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415325.4;locus_tag=AC56_RS18000;product=PKHD-type hydroxylase YbiX;protein_id=WP_000990177.1;transl_table=11
NZ_JJLS01000136.1	RefSeq	gene	59999	61111	.	+	.	ID=gene-AC56_RS17995;Name=AC56_RS17995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS17995;old_locus_tag=AC56_0843
NZ_JJLS01000136.1	Protein Homology	CDS	59999	61111	.	+	0	ID=cds-WP_032282600.1;Parent=gene-AC56_RS17995;Dbxref=GenBank:WP_032282600.1;Name=WP_032282600.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS17995;product=IS4-like element IS421 family transposase;protein_id=WP_032282600.1;transl_table=11
##sequence-region NZ_JJLS01000137.1 1 4569
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000137.1	RefSeq	region	1	4569	.	+	.	ID=NZ_JJLS01000137.1:1..4569;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000137.1	RefSeq	gene	1	961	.	+	.	ID=gene-AC56_RS17990;Name=AC56_RS17990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS17990;old_locus_tag=AC56_0845;partial=true;start_range=.,1
NZ_JJLS01000137.1	Protein Homology	CDS	1	961	.	+	1	ID=cds-WP_032282478.1-6;Parent=gene-AC56_RS17990;Dbxref=GenBank:WP_032282478.1;Name=WP_032282478.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS17990;partial=true;product=IS4-like element IS421 family transposase;protein_id=WP_032282478.1;start_range=.,1;transl_table=11
NZ_JJLS01000137.1	RefSeq	pseudogene	1154	3142	.	-	.	ID=gene-AC56_RS17985;Name=AC56_RS17985;end_range=3142,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS17985;old_locus_tag=AC56_0846;partial=true;pseudo=true
NZ_JJLS01000137.1	Protein Homology	CDS	1154	3142	.	-	0	ID=cds-AC56_RS17985;Parent=gene-AC56_RS17985;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015891,GO:0015344;end_range=3142,.;gbkey=CDS;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415326.1;locus_tag=AC56_RS17985;partial=true;product=catecholate siderophore receptor Fiu;pseudo=true;transl_table=11
NZ_JJLS01000137.1	RefSeq	gene	3157	4503	.	-	.	ID=gene-AC56_RS17980;Name=AC56_RS17980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS17980;old_locus_tag=AC56_0847
NZ_JJLS01000137.1	Protein Homology	CDS	3157	4503	.	-	0	ID=cds-WP_000483767.1;Parent=gene-AC56_RS17980;Dbxref=GenBank:WP_000483767.1;Name=WP_000483767.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707145.1;locus_tag=AC56_RS17980;product=IS4-like element IS4 family transposase;protein_id=WP_000483767.1;transl_table=11
##sequence-region NZ_JJLS01000138.1 1 106741
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000138.1	RefSeq	region	1	106741	.	+	.	ID=NZ_JJLS01000138.1:1..106741;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000138.1	RefSeq	gene	15	1361	.	-	.	ID=gene-AC56_RS17975;Name=AC56_RS17975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS17975;old_locus_tag=AC56_0848
NZ_JJLS01000138.1	Protein Homology	CDS	15	1361	.	-	0	ID=cds-WP_000483767.1-2;Parent=gene-AC56_RS17975;Dbxref=GenBank:WP_000483767.1;Name=WP_000483767.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707145.1;locus_tag=AC56_RS17975;product=IS4-like element IS4 family transposase;protein_id=WP_000483767.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	pseudogene	1427	1732	.	-	.	ID=gene-AC56_RS17970;Name=AC56_RS17970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS17970;old_locus_tag=AC56_0849;partial=true;pseudo=true;start_range=.,1427
NZ_JJLS01000138.1	Protein Homology	CDS	1427	1732	.	-	0	ID=cds-AC56_RS17970;Parent=gene-AC56_RS17970;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308910.1;locus_tag=AC56_RS17970;partial=true;product=TonB-dependent receptor plug domain-containing protein;pseudo=true;start_range=.,1427;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	1997	2257	.	-	.	ID=gene-AC56_RS32665;Name=mcbA;gbkey=Gene;gene=mcbA;gene_biotype=protein_coding;locus_tag=AC56_RS32665;old_locus_tag=AC56_0850
NZ_JJLS01000138.1	Protein Homology	CDS	1997	2257	.	-	0	ID=cds-WP_000710619.1;Parent=gene-AC56_RS32665;Dbxref=GenBank:WP_000710619.1;Name=WP_000710619.1;gbkey=CDS;gene=mcbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415327.2;locus_tag=AC56_RS32665;product=DUF1471 family periplasmic protein McbA;protein_id=WP_000710619.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	2533	3459	.	+	.	ID=gene-AC56_RS17960;Name=rlmF;gbkey=Gene;gene=rlmF;gene_biotype=protein_coding;locus_tag=AC56_RS17960;old_locus_tag=AC56_0851
NZ_JJLS01000138.1	Protein Homology	CDS	2533	3459	.	+	0	ID=cds-WP_001295299.1;Parent=gene-AC56_RS17960;Dbxref=GenBank:WP_001295299.1;Name=WP_001295299.1;Ontology_term=GO:0006364,GO:0008988;gbkey=CDS;gene=rlmF;go_function=rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415328.4;locus_tag=AC56_RS17960;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;protein_id=WP_001295299.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	3456	5681	.	-	.	ID=gene-AC56_RS17955;Name=ybiO;gbkey=Gene;gene=ybiO;gene_biotype=protein_coding;locus_tag=AC56_RS17955;old_locus_tag=AC56_0852
NZ_JJLS01000138.1	Protein Homology	CDS	3456	5681	.	-	0	ID=cds-WP_032278030.1;Parent=gene-AC56_RS17955;Dbxref=GenBank:WP_032278030.1;Name=WP_032278030.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ybiO;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415329.4;locus_tag=AC56_RS17955;product=mechanosensitive channel protein;protein_id=WP_032278030.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	5942	6664	.	-	.	ID=gene-AC56_RS17950;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=AC56_RS17950;old_locus_tag=AC56_0853
NZ_JJLS01000138.1	Protein Homology	CDS	5942	6664	.	-	0	ID=cds-WP_000569083.1;Parent=gene-AC56_RS17950;Dbxref=GenBank:WP_000569083.1;Name=WP_000569083.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=glnQ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569103.1;locus_tag=AC56_RS17950;product=glutamine ABC transporter ATP-binding protein GlnQ;protein_id=WP_000569083.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	6661	7320	.	-	.	ID=gene-AC56_RS17945;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=AC56_RS17945;old_locus_tag=AC56_0854
NZ_JJLS01000138.1	Protein Homology	CDS	6661	7320	.	-	0	ID=cds-WP_001159065.1;Parent=gene-AC56_RS17945;Dbxref=GenBank:WP_001159065.1;Name=WP_001159065.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=glnP;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=AC56_RS17945;product=glutamine ABC transporter permease GlnP;protein_id=WP_001159065.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	7459	8205	.	-	.	ID=gene-AC56_RS17940;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=AC56_RS17940;old_locus_tag=AC56_0855
NZ_JJLS01000138.1	Protein Homology	CDS	7459	8205	.	-	0	ID=cds-WP_000843866.1;Parent=gene-AC56_RS17940;Dbxref=GenBank:WP_000843866.1;Name=WP_000843866.1;Ontology_term=GO:1903803,GO:0015599,GO:0043190;gbkey=CDS;gene=glnH;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled L-glutamine transmembrane transporter activity|0015599||IEA;go_process=L-glutamine import across plasma membrane|1903803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123681.1;locus_tag=AC56_RS17940;product=glutamine ABC transporter substrate-binding protein GlnH;protein_id=WP_000843866.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	8609	9112	.	-	.	ID=gene-AC56_RS17935;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;gene_synonym=pexB;locus_tag=AC56_RS17935;old_locus_tag=AC56_0856
NZ_JJLS01000138.1	Protein Homology	CDS	8609	9112	.	-	0	ID=cds-WP_000100800.1;Parent=gene-AC56_RS17935;Dbxref=GenBank:WP_000100800.1;Name=WP_000100800.1;Ontology_term=GO:0016722;gbkey=CDS;gene=dps;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001730644.1;locus_tag=AC56_RS17935;product=DNA starvation/stationary phase protection protein Dps;protein_id=WP_000100800.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	9411	10298	.	-	.	ID=gene-AC56_RS17930;Name=rhtA;gbkey=Gene;gene=rhtA;gene_biotype=protein_coding;locus_tag=AC56_RS17930;old_locus_tag=AC56_0857
NZ_JJLS01000138.1	Protein Homology	CDS	9411	10298	.	-	0	ID=cds-WP_001295297.1;Parent=gene-AC56_RS17930;Dbxref=GenBank:WP_001295297.1;Name=WP_001295297.1;gbkey=CDS;gene=rhtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308918.1;locus_tag=AC56_RS17930;product=threonine/homoserine exporter RhtA;protein_id=WP_001295297.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	10533	10598	.	+	.	ID=gene-AC56_RS32670;Name=AC56_RS32670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS32670
NZ_JJLS01000138.1	Protein Homology	CDS	10533	10598	.	+	0	ID=cds-WP_120795379.1;Parent=gene-AC56_RS32670;Dbxref=GenBank:WP_120795379.1;Name=WP_120795379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518760.1;locus_tag=AC56_RS32670;product=protein YliM;protein_id=WP_120795379.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	10651	11166	.	+	.	ID=gene-AC56_RS17925;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=AC56_RS17925;old_locus_tag=AC56_0858
NZ_JJLS01000138.1	Protein Homology	CDS	10651	11166	.	+	0	ID=cds-WP_001295296.1;Parent=gene-AC56_RS17925;Dbxref=GenBank:WP_001295296.1;Name=WP_001295296.1;gbkey=CDS;gene=ompX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308919.1;locus_tag=AC56_RS17925;product=outer membrane protein OmpX;protein_id=WP_001295296.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	11215	12798	.	-	.	ID=gene-AC56_RS17920;Name=opgE;gbkey=Gene;gene=opgE;gene_biotype=protein_coding;locus_tag=AC56_RS17920;old_locus_tag=AC56_0859
NZ_JJLS01000138.1	Protein Homology	CDS	11215	12798	.	-	0	ID=cds-WP_001054678.1;Parent=gene-AC56_RS17920;Dbxref=GenBank:WP_001054678.1;Name=WP_001054678.1;gbkey=CDS;gene=opgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415336.1;locus_tag=AC56_RS17920;product=phosphoethanolamine transferase;protein_id=WP_001054678.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	13070	13198	.	-	.	ID=gene-AC56_RS17915;Name=mntS;gbkey=Gene;gene=mntS;gene_biotype=protein_coding;locus_tag=AC56_RS17915;old_locus_tag=AC56_0860
NZ_JJLS01000138.1	Protein Homology	CDS	13070	13198	.	-	0	ID=cds-WP_001001761.1;Parent=gene-AC56_RS17915;Dbxref=GenBank:WP_001001761.1;Name=WP_001001761.1;gbkey=CDS;gene=mntS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439233.1;locus_tag=AC56_RS17915;product=manganase accumulation protein MntS;protein_id=WP_001001761.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	13384	13851	.	+	.	ID=gene-AC56_RS17910;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=AC56_RS17910;old_locus_tag=AC56_0861
NZ_JJLS01000138.1	Protein Homology	CDS	13384	13851	.	+	0	ID=cds-WP_000091016.1;Parent=gene-AC56_RS17910;Dbxref=GenBank:WP_000091016.1;Name=WP_000091016.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;gene=mntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415338.1;locus_tag=AC56_RS17910;product=manganese-binding transcriptional regulator MntR;protein_id=WP_000091016.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	13848	14966	.	+	.	ID=gene-AC56_RS17905;Name=ybiR;gbkey=Gene;gene=ybiR;gene_biotype=protein_coding;locus_tag=AC56_RS17905;old_locus_tag=AC56_0862
NZ_JJLS01000138.1	Protein Homology	CDS	13848	14966	.	+	0	ID=cds-WP_000056442.1;Parent=gene-AC56_RS17905;Dbxref=GenBank:WP_000056442.1;Name=WP_000056442.1;gbkey=CDS;gene=ybiR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415339.1;locus_tag=AC56_RS17905;product=anion transporter;protein_id=WP_000056442.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	15025	15945	.	-	.	ID=gene-AC56_RS17900;Name=ldtB;gbkey=Gene;gene=ldtB;gene_biotype=protein_coding;locus_tag=AC56_RS17900;old_locus_tag=AC56_0863
NZ_JJLS01000138.1	Protein Homology	CDS	15025	15945	.	-	0	ID=cds-WP_001056384.1;Parent=gene-AC56_RS17900;Dbxref=GenBank:WP_001056384.1;Name=WP_001056384.1;gbkey=CDS;gene=ldtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308923.1;locus_tag=AC56_RS17900;product=L%2CD-transpeptidase;protein_id=WP_001056384.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	16164	17756	.	+	.	ID=gene-AC56_RS17895;Name=ybiT;gbkey=Gene;gene=ybiT;gene_biotype=protein_coding;locus_tag=AC56_RS17895;old_locus_tag=AC56_0864
NZ_JJLS01000138.1	Protein Homology	CDS	16164	17756	.	+	0	ID=cds-WP_000961458.1;Parent=gene-AC56_RS17895;Dbxref=GenBank:WP_000961458.1;Name=WP_000961458.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ybiT;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308924.1;locus_tag=AC56_RS17895;product=ABC-F family ATPase;protein_id=WP_000961458.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	17997	19262	.	-	.	ID=gene-AC56_RS17890;Name=ybiU;gbkey=Gene;gene=ybiU;gene_biotype=protein_coding;locus_tag=AC56_RS17890;old_locus_tag=AC56_0865
NZ_JJLS01000138.1	Protein Homology	CDS	17997	19262	.	-	0	ID=cds-WP_000168797.1;Parent=gene-AC56_RS17890;Dbxref=GenBank:WP_000168797.1;Name=WP_000168797.1;gbkey=CDS;gene=ybiU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415342.1;locus_tag=AC56_RS17890;product=DUF1479 domain-containing protein;protein_id=WP_000168797.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	19414	20229	.	-	.	ID=gene-AC56_RS17885;Name=ybiV;gbkey=Gene;gene=ybiV;gene_biotype=protein_coding;locus_tag=AC56_RS17885;old_locus_tag=AC56_0866
NZ_JJLS01000138.1	Protein Homology	CDS	19414	20229	.	-	0	ID=cds-WP_000114272.1;Parent=gene-AC56_RS17885;Dbxref=GenBank:WP_000114272.1;Name=WP_000114272.1;gbkey=CDS;gene=ybiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415343.1;locus_tag=AC56_RS17885;product=sugar-phosphatase YbiV;protein_id=WP_000114272.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	20375	22807	.	-	.	ID=gene-AC56_RS17880;Name=ybiW;gbkey=Gene;gene=ybiW;gene_biotype=protein_coding;locus_tag=AC56_RS17880;old_locus_tag=AC56_0867
NZ_JJLS01000138.1	Protein Homology	CDS	20375	22807	.	-	0	ID=cds-WP_000209342.1;Parent=gene-AC56_RS17880;Dbxref=GenBank:WP_000209342.1;Name=WP_000209342.1;gbkey=CDS;gene=ybiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415344.1;locus_tag=AC56_RS17880;product=glycyl radical protein;protein_id=WP_000209342.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	22813	23712	.	-	.	ID=gene-AC56_RS17875;Name=ybiY;gbkey=Gene;gene=ybiY;gene_biotype=protein_coding;locus_tag=AC56_RS17875;old_locus_tag=AC56_0868
NZ_JJLS01000138.1	Protein Homology	CDS	22813	23712	.	-	0	ID=cds-WP_001295295.1;Parent=gene-AC56_RS17875;Dbxref=GenBank:WP_001295295.1;Name=WP_001295295.1;gbkey=CDS;gene=ybiY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415345.2;locus_tag=AC56_RS17875;product=glycyl-radical enzyme activating protein;protein_id=WP_001295295.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	23843	24505	.	+	.	ID=gene-AC56_RS17870;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=AC56_RS17870;old_locus_tag=AC56_0869
NZ_JJLS01000138.1	Protein Homology	CDS	23843	24505	.	+	0	ID=cds-WP_001295294.1;Parent=gene-AC56_RS17870;Dbxref=GenBank:WP_001295294.1;Name=WP_001295294.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415346.4;locus_tag=AC56_RS17870;product=fructose-6-phosphate aldolase;protein_id=WP_001295294.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	24684	25433	.	-	.	ID=gene-AC56_RS17865;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=AC56_RS17865;old_locus_tag=AC56_0870
NZ_JJLS01000138.1	Protein Homology	CDS	24684	25433	.	-	0	ID=cds-WP_032278031.1;Parent=gene-AC56_RS17865;Dbxref=GenBank:WP_032278031.1;Name=WP_032278031.1;Ontology_term=GO:0006777,GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706703.1;locus_tag=AC56_RS17865;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_032278031.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	25433	26668	.	-	.	ID=gene-AC56_RS17860;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=AC56_RS17860;old_locus_tag=AC56_0871
NZ_JJLS01000138.1	Protein Homology	CDS	25433	26668	.	-	0	ID=cds-WP_001515109.1;Parent=gene-AC56_RS17860;Dbxref=GenBank:WP_001515109.1;Name=WP_001515109.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA,molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308932.1;locus_tag=AC56_RS17860;product=molybdopterin molybdotransferase MoeA;protein_id=WP_001515109.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	26872	27837	.	+	.	ID=gene-AC56_RS17855;Name=iaaA;gbkey=Gene;gene=iaaA;gene_biotype=protein_coding;locus_tag=AC56_RS17855;old_locus_tag=AC56_0872
NZ_JJLS01000138.1	Protein Homology	CDS	26872	27837	.	+	0	ID=cds-WP_000513775.1;Parent=gene-AC56_RS17855;Dbxref=GenBank:WP_000513775.1;Name=WP_000513775.1;gbkey=CDS;gene=iaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415349.1;locus_tag=AC56_RS17855;product=beta-aspartyl-peptidase;protein_id=WP_000513775.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	27824	29695	.	+	.	ID=gene-AC56_RS17850;Name=gsiA;gbkey=Gene;gene=gsiA;gene_biotype=protein_coding;locus_tag=AC56_RS17850;old_locus_tag=AC56_0873
NZ_JJLS01000138.1	Protein Homology	CDS	27824	29695	.	+	0	ID=cds-WP_001301279.1;Parent=gene-AC56_RS17850;Dbxref=GenBank:WP_001301279.1;Name=WP_001301279.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=gsiA;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415350.2;locus_tag=AC56_RS17850;product=glutathione ABC transporter ATP-binding protein GsiA;protein_id=WP_001301279.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	29715	31253	.	+	.	ID=gene-AC56_RS17845;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=protein_coding;locus_tag=AC56_RS17845;old_locus_tag=AC56_0874
NZ_JJLS01000138.1	Protein Homology	CDS	29715	31253	.	+	0	ID=cds-WP_000090140.1;Parent=gene-AC56_RS17845;Dbxref=GenBank:WP_000090140.1;Name=WP_000090140.1;Ontology_term=GO:0034775,GO:0034634,GO:0043190;gbkey=CDS;gene=gsiB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=glutathione transmembrane transporter activity|0034634||IEA;go_process=glutathione transmembrane transport|0034775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415351.1;locus_tag=AC56_RS17845;product=glutathione ABC transporter substrate-binding protein GsiB;protein_id=WP_000090140.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	31271	32191	.	+	.	ID=gene-AC56_RS17840;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=protein_coding;locus_tag=AC56_RS17840;old_locus_tag=AC56_0875
NZ_JJLS01000138.1	Protein Homology	CDS	31271	32191	.	+	0	ID=cds-WP_000936043.1;Parent=gene-AC56_RS17840;Dbxref=GenBank:WP_000936043.1;Name=WP_000936043.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415352.1;locus_tag=AC56_RS17840;product=glutathione ABC transporter permease GsiC;protein_id=WP_000936043.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	32194	33105	.	+	.	ID=gene-AC56_RS17835;Name=gsiD;gbkey=Gene;gene=gsiD;gene_biotype=protein_coding;locus_tag=AC56_RS17835;old_locus_tag=AC56_0876
NZ_JJLS01000138.1	Protein Homology	CDS	32194	33105	.	+	0	ID=cds-WP_001236044.1;Parent=gene-AC56_RS17835;Dbxref=GenBank:WP_001236044.1;Name=WP_001236044.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiD;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308938.1;locus_tag=AC56_RS17835;product=glutathione ABC transporter permease GsiD;protein_id=WP_001236044.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	33283	35631	.	+	.	ID=gene-AC56_RS17830;Name=pdeI;gbkey=Gene;gene=pdeI;gene_biotype=protein_coding;locus_tag=AC56_RS17830;old_locus_tag=AC56_0877
NZ_JJLS01000138.1	Protein Homology	CDS	33283	35631	.	+	0	ID=cds-WP_032282602.1;Parent=gene-AC56_RS17830;Dbxref=GenBank:WP_032282602.1;Name=WP_032282602.1;Ontology_term=GO:0007165,GO:0071111;gbkey=CDS;gene=pdeI;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415354.1;locus_tag=AC56_RS17830;product=sensor domain-containing phosphodiesterase;protein_id=WP_032282602.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	35639	36967	.	+	.	ID=gene-AC56_RS17825;Name=dgcI;gbkey=Gene;gene=dgcI;gene_biotype=protein_coding;locus_tag=AC56_RS17825;old_locus_tag=AC56_0878
NZ_JJLS01000138.1	Protein Homology	CDS	35639	36967	.	+	0	ID=cds-WP_000086877.1;Parent=gene-AC56_RS17825;Dbxref=GenBank:WP_000086877.1;Name=WP_000086877.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;gene=dgcI;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308940.1;locus_tag=AC56_RS17825;product=GGDEF domain-containing protein;protein_id=WP_000086877.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	37037	37366	.	-	.	ID=gene-AC56_RS17820;Name=AC56_RS17820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS17820;old_locus_tag=AC56_0879
NZ_JJLS01000138.1	Protein Homology	CDS	37037	37366	.	-	0	ID=cds-WP_001280945.1;Parent=gene-AC56_RS17820;Dbxref=GenBank:WP_001280945.1;Name=WP_001280945.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502595.1;locus_tag=AC56_RS17820;product=helix-turn-helix domain-containing protein;protein_id=WP_001280945.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	37356	37742	.	-	.	ID=gene-AC56_RS17815;Name=AC56_RS17815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS17815;old_locus_tag=AC56_0880
NZ_JJLS01000138.1	Protein Homology	CDS	37356	37742	.	-	0	ID=cds-WP_000539521.1;Parent=gene-AC56_RS17815;Dbxref=GenBank:WP_000539521.1;Name=WP_000539521.1;Ontology_term=GO:0004519,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502596.1;locus_tag=AC56_RS17815;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_000539521.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	37968	39293	.	-	.	ID=gene-AC56_RS17810;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=AC56_RS17810;old_locus_tag=AC56_0881
NZ_JJLS01000138.1	Protein Homology	CDS	37968	39293	.	-	0	ID=cds-WP_000049367.1;Parent=gene-AC56_RS17810;Dbxref=GenBank:WP_000049367.1;Name=WP_000049367.1;Ontology_term=GO:0018339,GO:0008172,GO:0016740,GO:0016782,GO:0051539,GO:1904047,GO:0005737;gbkey=CDS;gene=rimO;go_component=cytoplasm|0005737||IEA;go_function=S-methyltransferase activity|0008172||IEA,transferase activity|0016740||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308942.1;locus_tag=AC56_RS17810;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_000049367.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	39506	39889	.	+	.	ID=gene-AC56_RS0125420;Name=bssR;gbkey=Gene;gene=bssR;gene_biotype=protein_coding;locus_tag=AC56_RS0125420;old_locus_tag=AC56_0882
NZ_JJLS01000138.1	Protein Homology	CDS	39506	39889	.	+	0	ID=cds-WP_000497137.1;Parent=gene-AC56_RS0125420;Dbxref=GenBank:WP_000497137.1;Name=WP_000497137.1;gbkey=CDS;gene=bssR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308943.1;locus_tag=AC56_RS0125420;product=biofilm formation regulator BssR;protein_id=WP_000497137.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	40000	41115	.	+	.	ID=gene-AC56_RS17805;Name=yliI;gbkey=Gene;gene=yliI;gene_biotype=protein_coding;locus_tag=AC56_RS17805;old_locus_tag=AC56_0883
NZ_JJLS01000138.1	Protein Homology	CDS	40000	41115	.	+	0	ID=cds-WP_000555031.1;Parent=gene-AC56_RS17805;Dbxref=GenBank:WP_000555031.1;Name=WP_000555031.1;gbkey=CDS;gene=yliI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415358.1;locus_tag=AC56_RS17805;product=aldose sugar dehydrogenase YliI;protein_id=WP_000555031.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	41112	41738	.	-	.	ID=gene-AC56_RS17800;Name=gstB;gbkey=Gene;gene=gstB;gene_biotype=protein_coding;locus_tag=AC56_RS17800;old_locus_tag=AC56_0884
NZ_JJLS01000138.1	Protein Homology	CDS	41112	41738	.	-	0	ID=cds-WP_001295292.1;Parent=gene-AC56_RS17800;Dbxref=GenBank:WP_001295292.1;Name=WP_001295292.1;gbkey=CDS;gene=gstB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308945.2;locus_tag=AC56_RS17800;product=glutathione S-transferase GstB;protein_id=WP_001295292.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	41985	43187	.	+	.	ID=gene-AC56_RS17795;Name=dacC;gbkey=Gene;gene=dacC;gene_biotype=protein_coding;locus_tag=AC56_RS17795;old_locus_tag=AC56_0885
NZ_JJLS01000138.1	Protein Homology	CDS	41985	43187	.	+	0	ID=cds-WP_001300708.1;Parent=gene-AC56_RS17795;Dbxref=GenBank:WP_001300708.1;Name=WP_001300708.1;gbkey=CDS;gene=dacC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415360.1;locus_tag=AC56_RS17795;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_001300708.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	43234	43992	.	-	.	ID=gene-AC56_RS17790;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=AC56_RS17790;old_locus_tag=AC56_0886
NZ_JJLS01000138.1	Protein Homology	CDS	43234	43992	.	-	0	ID=cds-WP_000450121.1;Parent=gene-AC56_RS17790;Dbxref=GenBank:WP_000450121.1;Name=WP_000450121.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=deoR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308947.1;locus_tag=AC56_RS17790;product=DNA-binding transcriptional repressor DeoR;protein_id=WP_000450121.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	44050	44646	.	-	.	ID=gene-AC56_RS17785;Name=ybjG;gbkey=Gene;gene=ybjG;gene_biotype=protein_coding;locus_tag=AC56_RS17785;old_locus_tag=AC56_0887
NZ_JJLS01000138.1	Protein Homology	CDS	44050	44646	.	-	0	ID=cds-WP_001295291.1;Parent=gene-AC56_RS17785;Dbxref=GenBank:WP_001295291.1;Name=WP_001295291.1;Ontology_term=GO:0050380,GO:0005886;gbkey=CDS;gene=ybjG;go_component=plasma membrane|0005886||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415362.1;locus_tag=AC56_RS17785;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001295291.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	44931	46163	.	+	.	ID=gene-AC56_RS17780;Name=mdfA;gbkey=Gene;gene=mdfA;gene_biotype=protein_coding;locus_tag=AC56_RS17780;old_locus_tag=AC56_0888
NZ_JJLS01000138.1	Protein Homology	CDS	44931	46163	.	+	0	ID=cds-WP_001180089.1;Parent=gene-AC56_RS17780;Dbxref=GenBank:WP_001180089.1;Name=WP_001180089.1;gbkey=CDS;gene=mdfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308949.1;locus_tag=AC56_RS17780;product=multidrug efflux MFS transporter MdfA;protein_id=WP_001180089.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	46204	46488	.	-	.	ID=gene-AC56_RS17775;Name=ybjH;gbkey=Gene;gene=ybjH;gene_biotype=protein_coding;locus_tag=AC56_RS17775;old_locus_tag=AC56_0889
NZ_JJLS01000138.1	Protein Homology	CDS	46204	46488	.	-	0	ID=cds-WP_077746178.1;Parent=gene-AC56_RS17775;Dbxref=GenBank:WP_077746178.1;Name=WP_077746178.1;gbkey=CDS;gene=ybjH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415364.1;locus_tag=AC56_RS17775;product=protein YbjH;protein_id=WP_077746178.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	46574	47389	.	-	.	ID=gene-AC56_RS17770;Name=ybjI;gbkey=Gene;gene=ybjI;gene_biotype=protein_coding;locus_tag=AC56_RS17770;old_locus_tag=AC56_0890
NZ_JJLS01000138.1	Protein Homology	CDS	46574	47389	.	-	0	ID=cds-WP_000023565.1;Parent=gene-AC56_RS17770;Dbxref=GenBank:WP_000023565.1;Name=WP_000023565.1;gbkey=CDS;gene=ybjI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415365.4;locus_tag=AC56_RS17770;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase;protein_id=WP_000023565.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	47389	48597	.	-	.	ID=gene-AC56_RS17765;Name=ybjJ;gbkey=Gene;gene=ybjJ;gene_biotype=protein_coding;locus_tag=AC56_RS17765;old_locus_tag=AC56_0891
NZ_JJLS01000138.1	Protein Homology	CDS	47389	48597	.	-	0	ID=cds-WP_000217859.1;Parent=gene-AC56_RS17765;Dbxref=GenBank:WP_000217859.1;Name=WP_000217859.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ybjJ;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415366.1;locus_tag=AC56_RS17765;product=MFS transporter;protein_id=WP_000217859.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	48681	49217	.	+	.	ID=gene-AC56_RS17760;Name=rcdA;gbkey=Gene;gene=rcdA;gene_biotype=protein_coding;locus_tag=AC56_RS17760;old_locus_tag=AC56_0892
NZ_JJLS01000138.1	Protein Homology	CDS	48681	49217	.	+	0	ID=cds-WP_001295289.1;Parent=gene-AC56_RS17760;Dbxref=GenBank:WP_001295289.1;Name=WP_001295289.1;gbkey=CDS;gene=rcdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415367.1;locus_tag=AC56_RS17760;product=DNA-binding transcriptional regulator RcdA;protein_id=WP_001295289.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	49392	51077	.	-	.	ID=gene-AC56_RS17755;Name=ybjL;gbkey=Gene;gene=ybjL;gene_biotype=protein_coding;locus_tag=AC56_RS17755;old_locus_tag=AC56_0893
NZ_JJLS01000138.1	Protein Homology	CDS	49392	51077	.	-	0	ID=cds-WP_001024876.1;Parent=gene-AC56_RS17755;Dbxref=GenBank:WP_001024876.1;Name=WP_001024876.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;gene=ybjL;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001024888.1;locus_tag=AC56_RS17755;product=aspartate:alanine antiporter;protein_id=WP_001024876.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	51347	51724	.	+	.	ID=gene-AC56_RS17750;Name=ybjM;gbkey=Gene;gene=ybjM;gene_biotype=protein_coding;locus_tag=AC56_RS17750;old_locus_tag=AC56_0894
NZ_JJLS01000138.1	Protein Homology	CDS	51347	51724	.	+	0	ID=cds-WP_000681108.1;Parent=gene-AC56_RS17750;Dbxref=GenBank:WP_000681108.1;Name=WP_000681108.1;gbkey=CDS;gene=ybjM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308955.1;locus_tag=AC56_RS17750;product=inner membrane protein YbjM;protein_id=WP_000681108.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	51754	52011	.	-	.	ID=gene-AC56_RS17745;Name=grxA;gbkey=Gene;gene=grxA;gene_biotype=protein_coding;locus_tag=AC56_RS17745;old_locus_tag=AC56_0895
NZ_JJLS01000138.1	Protein Homology	CDS	51754	52011	.	-	0	ID=cds-WP_001195225.1;Parent=gene-AC56_RS17745;Dbxref=GenBank:WP_001195225.1;Name=WP_001195225.1;gbkey=CDS;gene=grxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308956.1;locus_tag=AC56_RS17745;product=glutaredoxin 1;protein_id=WP_001195225.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	52171	52458	.	+	.	ID=gene-AC56_RS17740;Name=ybjC;gbkey=Gene;gene=ybjC;gene_biotype=protein_coding;locus_tag=AC56_RS17740;old_locus_tag=AC56_0896
NZ_JJLS01000138.1	Protein Homology	CDS	52171	52458	.	+	0	ID=cds-WP_001201560.1;Parent=gene-AC56_RS17740;Dbxref=GenBank:WP_001201560.1;Name=WP_001201560.1;gbkey=CDS;gene=ybjC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415371.1;locus_tag=AC56_RS17740;product=DUF1418 family protein;protein_id=WP_001201560.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	52442	53164	.	+	.	ID=gene-AC56_RS17735;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=AC56_RS17735;old_locus_tag=AC56_0897
NZ_JJLS01000138.1	Protein Homology	CDS	52442	53164	.	+	0	ID=cds-WP_000189162.1;Parent=gene-AC56_RS17735;Dbxref=GenBank:WP_000189162.1;Name=WP_000189162.1;gbkey=CDS;gene=nfsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308958.1;locus_tag=AC56_RS17735;product=nitroreductase NfsA;protein_id=WP_000189162.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	53225	54127	.	+	.	ID=gene-AC56_RS17730;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=AC56_RS17730;old_locus_tag=AC56_0898
NZ_JJLS01000138.1	Protein Homology	CDS	53225	54127	.	+	0	ID=cds-WP_000684321.1;Parent=gene-AC56_RS17730;Dbxref=GenBank:WP_000684321.1;Name=WP_000684321.1;Ontology_term=GO:0036211,GO:0005524,GO:0046872;gbkey=CDS;gene=rimK;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308959.1;locus_tag=AC56_RS17730;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=WP_000684321.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	54215	54691	.	+	.	ID=gene-AC56_RS17725;Name=ybjN;gbkey=Gene;gene=ybjN;gene_biotype=protein_coding;locus_tag=AC56_RS17725;old_locus_tag=AC56_0899
NZ_JJLS01000138.1	Protein Homology	CDS	54215	54691	.	+	0	ID=cds-WP_000203025.1;Parent=gene-AC56_RS17725;Dbxref=GenBank:WP_000203025.1;Name=WP_000203025.1;gbkey=CDS;gene=ybjN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308960.1;locus_tag=AC56_RS17725;product=YbjN domain-containing protein;protein_id=WP_000203025.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	55042	56154	.	+	.	ID=gene-AC56_RS17715;Name=potF;gbkey=Gene;gene=potF;gene_biotype=protein_coding;locus_tag=AC56_RS17715;old_locus_tag=AC56_0902
NZ_JJLS01000138.1	Protein Homology	CDS	55042	56154	.	+	0	ID=cds-WP_000126072.1;Parent=gene-AC56_RS17715;Dbxref=GenBank:WP_000126072.1;Name=WP_000126072.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potF;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415375.1;locus_tag=AC56_RS17715;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;protein_id=WP_000126072.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	56249	57382	.	+	.	ID=gene-AC56_RS17710;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=AC56_RS17710;old_locus_tag=AC56_0903
NZ_JJLS01000138.1	Protein Homology	CDS	56249	57382	.	+	0	ID=cds-WP_000996005.1;Parent=gene-AC56_RS17710;Dbxref=GenBank:WP_000996005.1;Name=WP_000996005.1;Ontology_term=GO:0015846,GO:0055085,GO:0005524,GO:0015417,GO:0022857,GO:0043190;gbkey=CDS;gene=potG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type polyamine transporter activity|0015417||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996010.1;locus_tag=AC56_RS17710;product=putrescine ABC transporter ATP-binding subunit PotG;protein_id=WP_000996005.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	57392	58345	.	+	.	ID=gene-AC56_RS17705;Name=potH;gbkey=Gene;gene=potH;gene_biotype=protein_coding;locus_tag=AC56_RS17705;old_locus_tag=AC56_0904
NZ_JJLS01000138.1	Protein Homology	CDS	57392	58345	.	+	0	ID=cds-WP_000105444.1;Parent=gene-AC56_RS17705;Dbxref=GenBank:WP_000105444.1;Name=WP_000105444.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potH;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415377.1;locus_tag=AC56_RS17705;product=putrescine ABC transporter permease PotH;protein_id=WP_000105444.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	58342	59187	.	+	.	ID=gene-AC56_RS17700;Name=potI;gbkey=Gene;gene=potI;gene_biotype=protein_coding;locus_tag=AC56_RS17700;old_locus_tag=AC56_0905
NZ_JJLS01000138.1	Protein Homology	CDS	58342	59187	.	+	0	ID=cds-WP_001061665.1;Parent=gene-AC56_RS17700;Dbxref=GenBank:WP_001061665.1;Name=WP_001061665.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potI;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415378.1;locus_tag=AC56_RS17700;product=putrescine ABC transporter permease PotI;protein_id=WP_001061665.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	59247	59735	.	+	.	ID=gene-AC56_RS17695;Name=ybjO;gbkey=Gene;gene=ybjO;gene_biotype=protein_coding;locus_tag=AC56_RS17695;old_locus_tag=AC56_0906
NZ_JJLS01000138.1	Protein Homology	CDS	59247	59735	.	+	0	ID=cds-WP_000389260.1;Parent=gene-AC56_RS17695;Dbxref=GenBank:WP_000389260.1;Name=WP_000389260.1;gbkey=CDS;gene=ybjO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308965.1;locus_tag=AC56_RS17695;product=YbjO family protein;protein_id=WP_000389260.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	59776	60903	.	+	.	ID=gene-AC56_RS17690;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=AC56_RS17690;old_locus_tag=AC56_0907
NZ_JJLS01000138.1	Protein Homology	CDS	59776	60903	.	+	0	ID=cds-WP_001149705.1;Parent=gene-AC56_RS17690;Dbxref=GenBank:WP_001149705.1;Name=WP_001149705.1;Ontology_term=GO:0016070,GO:0008649;gbkey=CDS;gene=rlmC;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706739.1;locus_tag=AC56_RS17690;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_001149705.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	61102	61833	.	-	.	ID=gene-AC56_RS17685;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=AC56_RS17685;old_locus_tag=AC56_0908
NZ_JJLS01000138.1	Protein Homology	CDS	61102	61833	.	-	0	ID=cds-WP_001295905.1;Parent=gene-AC56_RS17685;Dbxref=GenBank:WP_001295905.1;Name=WP_001295905.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415381.1;locus_tag=AC56_RS17685;product=arginine ABC transporter substrate-binding protein ArtJ;protein_id=WP_001295905.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	62124	62792	.	-	.	ID=gene-AC56_RS17680;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=AC56_RS17680;old_locus_tag=AC56_0909
NZ_JJLS01000138.1	Protein Homology	CDS	62124	62792	.	-	0	ID=cds-WP_000464491.1;Parent=gene-AC56_RS17680;Dbxref=GenBank:WP_000464491.1;Name=WP_000464491.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308971.1;locus_tag=AC56_RS17680;product=arginine ABC transporter permease ArtM;protein_id=WP_000464491.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	62792	63508	.	-	.	ID=gene-AC56_RS17675;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=AC56_RS17675;old_locus_tag=AC56_0910
NZ_JJLS01000138.1	Protein Homology	CDS	62792	63508	.	-	0	ID=cds-WP_001001697.1;Parent=gene-AC56_RS17675;Dbxref=GenBank:WP_001001697.1;Name=WP_001001697.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artQ;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308972.1;locus_tag=AC56_RS17675;product=arginine ABC transporter permease ArtQ;protein_id=WP_001001697.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	63515	64246	.	-	.	ID=gene-AC56_RS17670;Name=artI;gbkey=Gene;gene=artI;gene_biotype=protein_coding;locus_tag=AC56_RS17670;old_locus_tag=AC56_0911
NZ_JJLS01000138.1	Protein Homology	CDS	63515	64246	.	-	0	ID=cds-WP_000756569.1;Parent=gene-AC56_RS17670;Dbxref=GenBank:WP_000756569.1;Name=WP_000756569.1;Ontology_term=GO:0015424,GO:0043190;gbkey=CDS;gene=artI;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type amino acid transporter activity|0015424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415384.1;locus_tag=AC56_RS17670;product=arginine ABC transporter substrate-binding protein ArtI;protein_id=WP_000756569.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	64264	64992	.	-	.	ID=gene-AC56_RS17665;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=AC56_RS17665;old_locus_tag=AC56_0912
NZ_JJLS01000138.1	Protein Homology	CDS	64264	64992	.	-	0	ID=cds-WP_032278034.1;Parent=gene-AC56_RS17665;Dbxref=GenBank:WP_032278034.1;Name=WP_032278034.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424,GO:0043190;gbkey=CDS;gene=artP;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742668.1;locus_tag=AC56_RS17665;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=WP_032278034.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	65210	65725	.	-	.	ID=gene-AC56_RS17660;Name=ybjP;gbkey=Gene;gene=ybjP;gene_biotype=protein_coding;locus_tag=AC56_RS17660;old_locus_tag=AC56_0913
NZ_JJLS01000138.1	Protein Homology	CDS	65210	65725	.	-	0	ID=cds-WP_001270734.1;Parent=gene-AC56_RS17660;Dbxref=GenBank:WP_001270734.1;Name=WP_001270734.1;gbkey=CDS;gene=ybjP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415386.1;locus_tag=AC56_RS17660;product=lipoprotein;protein_id=WP_001270734.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	65851	66174	.	+	.	ID=gene-AC56_RS17655;Name=ybjQ;gbkey=Gene;gene=ybjQ;gene_biotype=protein_coding;locus_tag=AC56_RS17655;old_locus_tag=AC56_0914
NZ_JJLS01000138.1	Protein Homology	CDS	65851	66174	.	+	0	ID=cds-WP_001160737.1;Parent=gene-AC56_RS17655;Dbxref=GenBank:WP_001160737.1;Name=WP_001160737.1;gbkey=CDS;gene=ybjQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308979.1;locus_tag=AC56_RS17655;product=heavy metal-binding domain-containing protein;protein_id=WP_001160737.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	66171	67001	.	+	.	ID=gene-AC56_RS17650;Name=amiD;gbkey=Gene;gene=amiD;gene_biotype=protein_coding;locus_tag=AC56_RS17650;old_locus_tag=AC56_0915
NZ_JJLS01000138.1	Protein Homology	CDS	66171	67001	.	+	0	ID=cds-WP_001255167.1;Parent=gene-AC56_RS17650;Dbxref=GenBank:WP_001255167.1;Name=WP_001255167.1;gbkey=CDS;gene=amiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415388.1;locus_tag=AC56_RS17650;product=N-acetylmuramoyl-L-alanine amidase AmiD;protein_id=WP_001255167.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	66998	68011	.	-	.	ID=gene-AC56_RS17645;Name=ybjS;gbkey=Gene;gene=ybjS;gene_biotype=protein_coding;locus_tag=AC56_RS17645;old_locus_tag=AC56_0916
NZ_JJLS01000138.1	Protein Homology	CDS	66998	68011	.	-	0	ID=cds-WP_032278046.1;Parent=gene-AC56_RS17645;Dbxref=GenBank:WP_032278046.1;Name=WP_032278046.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;gene=ybjS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415389.2;locus_tag=AC56_RS17645;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_032278046.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	68110	69540	.	-	.	ID=gene-AC56_RS17640;Name=ybjT;gbkey=Gene;gene=ybjT;gene_biotype=protein_coding;locus_tag=AC56_RS17640;old_locus_tag=AC56_0917
NZ_JJLS01000138.1	Protein Homology	CDS	68110	69540	.	-	0	ID=cds-WP_032278035.1;Parent=gene-AC56_RS17640;Dbxref=GenBank:WP_032278035.1;Name=WP_032278035.1;gbkey=CDS;gene=ybjT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415390.4;locus_tag=AC56_RS17640;product=SDR family oxidoreductase;protein_id=WP_032278035.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	69551	70552	.	-	.	ID=gene-AC56_RS17635;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;locus_tag=AC56_RS17635;old_locus_tag=AC56_0918
NZ_JJLS01000138.1	Protein Homology	CDS	69551	70552	.	-	0	ID=cds-WP_000566372.1;Parent=gene-AC56_RS17635;Dbxref=GenBank:WP_000566372.1;Name=WP_000566372.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;gene=ltaE;go_function=lyase activity|0016829||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706751.1;locus_tag=AC56_RS17635;product=low-specificity L-threonine aldolase;protein_id=WP_000566372.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	70589	72307	.	-	.	ID=gene-AC56_RS17630;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=AC56_RS17630;old_locus_tag=AC56_0919
NZ_JJLS01000138.1	Protein Homology	CDS	70589	72307	.	-	0	ID=cds-WP_032278036.1;Parent=gene-AC56_RS17630;Dbxref=GenBank:WP_032278036.1;Name=WP_032278036.1;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415392.1;locus_tag=AC56_RS17630;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=WP_032278036.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	72440	73408	.	-	.	ID=gene-AC56_RS17625;Name=hcr;gbkey=Gene;gene=hcr;gene_biotype=protein_coding;locus_tag=AC56_RS17625;old_locus_tag=AC56_0920
NZ_JJLS01000138.1	Protein Homology	CDS	72440	73408	.	-	0	ID=cds-WP_000178677.1;Parent=gene-AC56_RS17625;Dbxref=GenBank:WP_000178677.1;Name=WP_000178677.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=hcr;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415393.1;locus_tag=AC56_RS17625;product=NADH oxidoreductase;protein_id=WP_000178677.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	73420	75072	.	-	.	ID=gene-AC56_RS17620;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=AC56_RS17620;old_locus_tag=AC56_0921
NZ_JJLS01000138.1	Protein Homology	CDS	73420	75072	.	-	0	ID=cds-WP_032278037.1;Parent=gene-AC56_RS17620;Dbxref=GenBank:WP_032278037.1;Name=WP_032278037.1;Ontology_term=GO:0016661,GO:0051536;gbkey=CDS;gene=hcp;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122080.1;locus_tag=AC56_RS17620;product=hydroxylamine reductase;protein_id=WP_032278037.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	75216	76115	.	-	.	ID=gene-AC56_RS17615;Name=lysO;gbkey=Gene;gene=lysO;gene_biotype=protein_coding;locus_tag=AC56_RS17615;old_locus_tag=AC56_0922
NZ_JJLS01000138.1	Protein Homology	CDS	75216	76115	.	-	0	ID=cds-WP_032278038.1;Parent=gene-AC56_RS17615;Dbxref=GenBank:WP_032278038.1;Name=WP_032278038.1;gbkey=CDS;gene=lysO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415395.2;locus_tag=AC56_RS17615;product=L-lysine exporter LysO;protein_id=WP_032278038.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	76610	77305	.	-	.	ID=gene-AC56_RS17610;Name=aqpZ;gbkey=Gene;gene=aqpZ;gene_biotype=protein_coding;locus_tag=AC56_RS17610;old_locus_tag=AC56_0923
NZ_JJLS01000138.1	Protein Homology	CDS	76610	77305	.	-	0	ID=cds-WP_001298299.1;Parent=gene-AC56_RS17610;Dbxref=GenBank:WP_001298299.1;Name=WP_001298299.1;Ontology_term=GO:0006833,GO:0015250;gbkey=CDS;gene=aqpZ;go_function=water channel activity|0015250||IEA;go_process=water transport|0006833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415396.1;locus_tag=AC56_RS17610;product=aquaporin Z;protein_id=WP_001298299.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	77729	79387	.	+	.	ID=gene-AC56_RS17605;Name=ybjD;gbkey=Gene;gene=ybjD;gene_biotype=protein_coding;locus_tag=AC56_RS17605;old_locus_tag=AC56_0924
NZ_JJLS01000138.1	Protein Homology	CDS	77729	79387	.	+	0	ID=cds-WP_032278039.1;Parent=gene-AC56_RS17605;Dbxref=GenBank:WP_032278039.1;Name=WP_032278039.1;gbkey=CDS;gene=ybjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415397.1;locus_tag=AC56_RS17605;product=ATP-dependent endonuclease;protein_id=WP_032278039.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	79384	80340	.	-	.	ID=gene-AC56_RS17600;Name=ybjX;gbkey=Gene;gene=ybjX;gene_biotype=protein_coding;locus_tag=AC56_RS17600;old_locus_tag=AC56_0925
NZ_JJLS01000138.1	Protein Homology	CDS	79384	80340	.	-	0	ID=cds-WP_141012172.1;Parent=gene-AC56_RS17600;Dbxref=GenBank:WP_141012172.1;Name=WP_141012172.1;gbkey=CDS;gene=ybjX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001322270.1;locus_tag=AC56_RS17600;product=VirK/YbjX family protein;protein_id=WP_141012172.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	80491	81606	.	+	.	ID=gene-AC56_RS17595;Name=macA;gbkey=Gene;gene=macA;gene_biotype=protein_coding;locus_tag=AC56_RS17595;old_locus_tag=AC56_0926
NZ_JJLS01000138.1	Protein Homology	CDS	80491	81606	.	+	0	ID=cds-WP_000746460.1;Parent=gene-AC56_RS17595;Dbxref=GenBank:WP_000746460.1;Name=WP_000746460.1;Ontology_term=GO:1990961,GO:0022857,GO:0019898,GO:1990195;gbkey=CDS;gene=macA;go_component=extrinsic component of membrane|0019898||IEA,macrolide transmembrane transporter complex|1990195||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308991.2;locus_tag=AC56_RS17595;product=macrolide transporter subunit MacA;protein_id=WP_000746460.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	pseudogene	81603	83548	.	+	.	ID=gene-AC56_RS0125430;Name=macB;gbkey=Gene;gene=macB;gene_biotype=pseudogene;locus_tag=AC56_RS0125430;old_locus_tag=AC56_0928;pseudo=true
NZ_JJLS01000138.1	Protein Homology	CDS	81603	83548	.	+	0	ID=cds-AC56_RS0125430;Parent=gene-AC56_RS0125430;Note=frameshifted;Ontology_term=GO:0005524,GO:0022857,GO:1990195;gbkey=CDS;gene=macB;go_component=macrolide transmembrane transporter complex|1990195||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308992.1;locus_tag=AC56_RS0125430;product=macrolide ABC transporter ATP-binding protein/permease MacB;pseudo=true;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	83621	83845	.	-	.	ID=gene-AC56_RS17590;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=AC56_RS17590;old_locus_tag=AC56_0929
NZ_JJLS01000138.1	Protein Homology	CDS	83621	83845	.	-	0	ID=cds-WP_000410785.1;Parent=gene-AC56_RS17590;Dbxref=GenBank:WP_000410785.1;Name=WP_000410785.1;gbkey=CDS;gene=cspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308993.1;locus_tag=AC56_RS17590;product=cold shock-like protein CspD;protein_id=WP_000410785.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	83995	84069	.	+	.	ID=gene-AC56_RS33235;Name=yljB;gbkey=Gene;gene=yljB;gene_biotype=protein_coding;locus_tag=AC56_RS33235
NZ_JJLS01000138.1	Protein Homology	CDS	83995	84069	.	+	0	ID=cds-WP_001406719.1;Parent=gene-AC56_RS33235;Dbxref=GenBank:WP_001406719.1;Name=WP_001406719.1;gbkey=CDS;gene=yljB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051179.1;locus_tag=AC56_RS33235;product=protein YljB;protein_id=WP_001406719.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	84168	84488	.	+	.	ID=gene-AC56_RS17585;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=AC56_RS17585;old_locus_tag=AC56_0930
NZ_JJLS01000138.1	Protein Homology	CDS	84168	84488	.	+	0	ID=cds-WP_000520792.1;Parent=gene-AC56_RS17585;Dbxref=GenBank:WP_000520792.1;Name=WP_000520792.1;Ontology_term=GO:0006508;gbkey=CDS;gene=clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128368.1;locus_tag=AC56_RS17585;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_000520792.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	84519	86795	.	+	.	ID=gene-AC56_RS17580;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=AC56_RS17580;old_locus_tag=AC56_0931
NZ_JJLS01000138.1	Protein Homology	CDS	84519	86795	.	+	0	ID=cds-WP_032278041.1;Parent=gene-AC56_RS17580;Dbxref=GenBank:WP_032278041.1;Name=WP_032278041.1;Ontology_term=GO:0043335,GO:0005524,GO:0016887;gbkey=CDS;gene=clpA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308995.1;locus_tag=AC56_RS17580;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_032278041.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	87255	87342	.	-	.	ID=gene-AC56_RS17575;Name=AC56_RS17575;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS17575;old_locus_tag=AC56_0932
NZ_JJLS01000138.1	tRNAscan-SE	tRNA	87255	87342	.	-	.	ID=rna-AC56_RS17575;Parent=gene-AC56_RS17575;anticodon=(pos:complement(87306..87308));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS17575;product=tRNA-Ser
NZ_JJLS01000138.1	tRNAscan-SE	exon	87255	87342	.	-	.	ID=exon-AC56_RS17575-1;Parent=rna-AC56_RS17575;anticodon=(pos:complement(87306..87308));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS17575;product=tRNA-Ser
NZ_JJLS01000138.1	RefSeq	gene	87596	87814	.	-	.	ID=gene-AC56_RS17570;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=AC56_RS17570;old_locus_tag=AC56_0933
NZ_JJLS01000138.1	Protein Homology	CDS	87596	87814	.	-	0	ID=cds-WP_001040187.1;Parent=gene-AC56_RS17570;Dbxref=GenBank:WP_001040187.1;Name=WP_001040187.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=AC56_RS17570;product=translation initiation factor IF-1;protein_id=WP_001040187.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	88099	88803	.	-	.	ID=gene-AC56_RS17565;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=AC56_RS17565;old_locus_tag=AC56_0934
NZ_JJLS01000138.1	Protein Homology	CDS	88099	88803	.	-	0	ID=cds-WP_001241678.1;Parent=gene-AC56_RS17565;Dbxref=GenBank:WP_001241678.1;Name=WP_001241678.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyl-tRNA--protein transferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415405.1;locus_tag=AC56_RS17565;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_001241678.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	88845	90566	.	-	.	ID=gene-AC56_RS17560;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=AC56_RS17560;old_locus_tag=AC56_0935
NZ_JJLS01000138.1	Protein Homology	CDS	88845	90566	.	-	0	ID=cds-WP_032278042.1;Parent=gene-AC56_RS17560;Dbxref=GenBank:WP_032278042.1;Name=WP_032278042.1;Ontology_term=GO:0045454,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415406.1;locus_tag=AC56_RS17560;product=heme ABC transporter ATP-binding protein/permease CydC;protein_id=WP_032278042.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	90567	92333	.	-	.	ID=gene-AC56_RS17555;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=AC56_RS17555;old_locus_tag=AC56_0936
NZ_JJLS01000138.1	Protein Homology	CDS	90567	92333	.	-	0	ID=cds-WP_001043575.1;Parent=gene-AC56_RS17555;Dbxref=GenBank:WP_001043575.1;Name=WP_001043575.1;Ontology_term=GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706772.1;locus_tag=AC56_RS17555;product=heme ABC transporter permease/ATP-binding protein CydD;protein_id=WP_001043575.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	92456	93421	.	-	.	ID=gene-AC56_RS17550;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=AC56_RS17550;old_locus_tag=AC56_0937
NZ_JJLS01000138.1	Protein Homology	CDS	92456	93421	.	-	0	ID=cds-WP_000537418.1;Parent=gene-AC56_RS17550;Dbxref=GenBank:WP_000537418.1;Name=WP_000537418.1;Ontology_term=GO:0019430,GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309000.1;locus_tag=AC56_RS17550;product=thioredoxin-disulfide reductase;protein_id=WP_000537418.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	93966	94460	.	+	.	ID=gene-AC56_RS17545;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=AC56_RS17545;old_locus_tag=AC56_0938
NZ_JJLS01000138.1	Protein Homology	CDS	93966	94460	.	+	0	ID=cds-WP_000228473.1;Parent=gene-AC56_RS17545;Dbxref=GenBank:WP_000228473.1;Name=WP_000228473.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001591745.1;locus_tag=AC56_RS17545;product=leucine-responsive transcriptional regulator Lrp;protein_id=WP_000228473.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	94595	98581	.	+	.	ID=gene-AC56_RS17540;Name=ftsK;gbkey=Gene;gene=ftsK;gene_biotype=protein_coding;locus_tag=AC56_RS17540;old_locus_tag=AC56_0939
NZ_JJLS01000138.1	Protein Homology	CDS	94595	98581	.	+	0	ID=cds-WP_032278044.1;Parent=gene-AC56_RS17540;Dbxref=GenBank:WP_032278044.1;Name=WP_032278044.1;Ontology_term=GO:0003677,GO:0005524;gbkey=CDS;gene=ftsK;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415410.1;locus_tag=AC56_RS17540;product=DNA translocase FtsK;protein_id=WP_032278044.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	98736	99347	.	+	.	ID=gene-AC56_RS17535;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=AC56_RS17535;old_locus_tag=AC56_0940
NZ_JJLS01000138.1	Protein Homology	CDS	98736	99347	.	+	0	ID=cds-WP_001295343.1;Parent=gene-AC56_RS17535;Dbxref=GenBank:WP_001295343.1;Name=WP_001295343.1;Ontology_term=GO:0042953,GO:0042597;gbkey=CDS;gene=lolA;go_component=periplasmic space|0042597||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010354356.1;locus_tag=AC56_RS17535;product=outer membrane lipoprotein chaperone LolA;protein_id=WP_001295343.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	99358	100701	.	+	.	ID=gene-AC56_RS17530;Name=rarA;gbkey=Gene;gene=rarA;gene_biotype=protein_coding;gene_synonym=mgsA;locus_tag=AC56_RS17530;old_locus_tag=AC56_0941
NZ_JJLS01000138.1	Protein Homology	CDS	99358	100701	.	+	0	ID=cds-WP_000067737.1;Parent=gene-AC56_RS17530;Dbxref=GenBank:WP_000067737.1;Name=WP_000067737.1;gbkey=CDS;gene=rarA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309004.1;locus_tag=AC56_RS17530;product=replication-associated recombination protein RarA;protein_id=WP_000067737.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	100792	102084	.	+	.	ID=gene-AC56_RS17525;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=AC56_RS17525;old_locus_tag=AC56_0942
NZ_JJLS01000138.1	Protein Homology	CDS	100792	102084	.	+	0	ID=cds-WP_000886683.1;Parent=gene-AC56_RS17525;Dbxref=GenBank:WP_000886683.1;Name=WP_000886683.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887397.1;locus_tag=AC56_RS17525;product=serine--tRNA ligase;protein_id=WP_000886683.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	102323	104767	.	+	.	ID=gene-AC56_RS17520;Name=dmsA;gbkey=Gene;gene=dmsA;gene_biotype=protein_coding;locus_tag=AC56_RS17520;old_locus_tag=AC56_0943
NZ_JJLS01000138.1	Protein Homology	CDS	102323	104767	.	+	0	ID=cds-WP_000850303.1;Parent=gene-AC56_RS17520;Dbxref=GenBank:WP_000850303.1;Name=WP_000850303.1;Ontology_term=GO:0009389,GO:0030151;gbkey=CDS;gene=dmsA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415414.4;locus_tag=AC56_RS17520;product=dimethylsulfoxide reductase subunit A;protein_id=WP_000850303.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	104778	105395	.	+	.	ID=gene-AC56_RS17515;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=AC56_RS17515;old_locus_tag=AC56_0944
NZ_JJLS01000138.1	Protein Homology	CDS	104778	105395	.	+	0	ID=cds-WP_000213098.1;Parent=gene-AC56_RS17515;Dbxref=GenBank:WP_000213098.1;Name=WP_000213098.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=AC56_RS17515;product=dimethylsulfoxide reductase iron-sulfur subunit DmsB;protein_id=WP_000213098.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	105397	106260	.	+	.	ID=gene-AC56_RS17510;Name=dmsC;gbkey=Gene;gene=dmsC;gene_biotype=protein_coding;locus_tag=AC56_RS17510;old_locus_tag=AC56_0945
NZ_JJLS01000138.1	Protein Homology	CDS	105397	106260	.	+	0	ID=cds-WP_032277590.1;Parent=gene-AC56_RS17510;Dbxref=GenBank:WP_032277590.1;Name=WP_032277590.1;gbkey=CDS;gene=dmsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415416.1;locus_tag=AC56_RS17510;product=dimethyl sulfoxide reductase anchor subunit DmsC;protein_id=WP_032277590.1;transl_table=11
NZ_JJLS01000138.1	RefSeq	gene	106455	106741	.	-	.	ID=gene-AC56_RS17505;Name=AC56_RS17505;end_range=106741,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS17505;old_locus_tag=AC56_0946;partial=true
NZ_JJLS01000138.1	Protein Homology	CDS	106455	106741	.	-	2	ID=cds-WP_001517533.1;Parent=gene-AC56_RS17505;Dbxref=GenBank:WP_001517533.1;Name=WP_001517533.1;end_range=106741,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS17505;partial=true;product=IS4 family transposase;protein_id=WP_001517533.1;transl_table=11
##sequence-region NZ_JJLS01000139.1 1 58098
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000139.1	RefSeq	region	1	58098	.	+	.	ID=NZ_JJLS01000139.1:1..58098;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000139.1	RefSeq	pseudogene	1	468	.	-	.	ID=gene-AC56_RS17500;Name=AC56_RS17500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS17500;old_locus_tag=AC56_0947;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000139.1	Protein Homology	CDS	1	468	.	-	0	ID=cds-AC56_RS17500;Parent=gene-AC56_RS17500;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS17500;partial=true;product=IS4-like element IS186A family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000139.1	RefSeq	gene	545	1171	.	-	.	ID=gene-AC56_RS17495;Name=ycaC;gbkey=Gene;gene=ycaC;gene_biotype=protein_coding;locus_tag=AC56_RS17495;old_locus_tag=AC56_0948
NZ_JJLS01000139.1	Protein Homology	CDS	545	1171	.	-	0	ID=cds-WP_000165879.1;Parent=gene-AC56_RS17495;Dbxref=GenBank:WP_000165879.1;Name=WP_000165879.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ycaC;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415417.1;locus_tag=AC56_RS17495;product=isochorismate family cysteine hydrolase YcaC;protein_id=WP_000165879.1;transl_table=11
NZ_JJLS01000139.1	RefSeq	gene	1485	2633	.	+	.	ID=gene-AC56_RS17490;Name=ycaD;gbkey=Gene;gene=ycaD;gene_biotype=protein_coding;locus_tag=AC56_RS17490;old_locus_tag=AC56_0950
NZ_JJLS01000139.1	Protein Homology	CDS	1485	2633	.	+	0	ID=cds-WP_000109295.1;Parent=gene-AC56_RS17490;Dbxref=GenBank:WP_000109295.1;Name=WP_000109295.1;gbkey=CDS;gene=ycaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309010.1;locus_tag=AC56_RS17490;product=MFS transporter;protein_id=WP_000109295.1;transl_table=11
NZ_JJLS01000139.1	RefSeq	pseudogene	2843	4271	.	+	.	ID=gene-AC56_RS0125435;Name=ycaM;gbkey=Gene;gene=ycaM;gene_biotype=pseudogene;locus_tag=AC56_RS0125435;old_locus_tag=AC56_0951;pseudo=true
NZ_JJLS01000139.1	Protein Homology	CDS	2843	4271	.	+	0	ID=cds-AC56_RS0125435;Parent=gene-AC56_RS0125435;Note=frameshifted;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;gene=ycaM;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415419.2;locus_tag=AC56_RS0125435;product=APC family permease;pseudo=true;transl_table=11
NZ_JJLS01000139.1	RefSeq	gene	4272	5180	.	-	.	ID=gene-AC56_RS17485;Name=ycaN;gbkey=Gene;gene=ycaN;gene_biotype=protein_coding;locus_tag=AC56_RS17485;old_locus_tag=AC56_0952
NZ_JJLS01000139.1	Protein Homology	CDS	4272	5180	.	-	0	ID=cds-WP_001242671.1;Parent=gene-AC56_RS17485;Dbxref=GenBank:WP_001242671.1;Name=WP_001242671.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=ycaN;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415420.1;locus_tag=AC56_RS17485;product=LysR family transcriptional regulator;protein_id=WP_001242671.1;transl_table=11
NZ_JJLS01000139.1	RefSeq	gene	5280	5870	.	+	.	ID=gene-AC56_RS17480;Name=ycaK;gbkey=Gene;gene=ycaK;gene_biotype=protein_coding;locus_tag=AC56_RS17480;old_locus_tag=AC56_0953
NZ_JJLS01000139.1	Protein Homology	CDS	5280	5870	.	+	0	ID=cds-WP_001190363.1;Parent=gene-AC56_RS17480;Dbxref=GenBank:WP_001190363.1;Name=WP_001190363.1;gbkey=CDS;gene=ycaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415421.1;locus_tag=AC56_RS17480;product=NAD(P)H oxidoreductase;protein_id=WP_001190363.1;transl_table=11
NZ_JJLS01000139.1	RefSeq	gene	5952	6692	.	-	.	ID=gene-AC56_RS17475;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=AC56_RS17475;old_locus_tag=AC56_0954
NZ_JJLS01000139.1	Protein Homology	CDS	5952	6692	.	-	0	ID=cds-WP_000111043.1;Parent=gene-AC56_RS17475;Dbxref=GenBank:WP_000111043.1;Name=WP_000111043.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309012.1;locus_tag=AC56_RS17475;product=pyruvate formate lyase 1-activating protein;protein_id=WP_000111043.1;transl_table=11
NZ_JJLS01000139.1	RefSeq	gene	6884	9166	.	-	.	ID=gene-AC56_RS17470;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=AC56_RS17470;old_locus_tag=AC56_0955
NZ_JJLS01000139.1	Protein Homology	CDS	6884	9166	.	-	0	ID=cds-WP_001292814.1;Parent=gene-AC56_RS17470;Dbxref=GenBank:WP_001292814.1;Name=WP_001292814.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706821.1;locus_tag=AC56_RS17470;product=formate C-acetyltransferase;protein_id=WP_001292814.1;transl_table=11
NZ_JJLS01000139.1	RefSeq	gene	9221	10078	.	-	.	ID=gene-AC56_RS32015;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=AC56_RS32015;old_locus_tag=AC56_0956
NZ_JJLS01000139.1	Protein Homology	CDS	9221	10078	.	-	0	ID=cds-WP_000642546.1;Parent=gene-AC56_RS32015;Dbxref=GenBank:WP_000642546.1;Name=WP_000642546.1;gbkey=CDS;gene=focA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309014.1;locus_tag=AC56_RS32015;product=formate transporter FocA;protein_id=WP_000642546.1;transl_table=11
NZ_JJLS01000139.1	RefSeq	gene	10484	12244	.	-	.	ID=gene-AC56_RS17460;Name=ycaO;gbkey=Gene;gene=ycaO;gene_biotype=protein_coding;locus_tag=AC56_RS17460;old_locus_tag=AC56_0957
NZ_JJLS01000139.1	Protein Homology	CDS	10484	12244	.	-	0	ID=cds-WP_001295344.1;Parent=gene-AC56_RS17460;Dbxref=GenBank:WP_001295344.1;Name=WP_001295344.1;gbkey=CDS;gene=ycaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415425.4;locus_tag=AC56_RS17460;product=30S ribosomal protein S12 methylthiotransferase accessory factor YcaO;protein_id=WP_001295344.1;transl_table=11
NZ_JJLS01000139.1	RefSeq	gene	12374	13066	.	+	.	ID=gene-AC56_RS17455;Name=ycaP;gbkey=Gene;gene=ycaP;gene_biotype=protein_coding;locus_tag=AC56_RS17455;old_locus_tag=AC56_0958
NZ_JJLS01000139.1	Protein Homology	CDS	12374	13066	.	+	0	ID=cds-WP_032278047.1;Parent=gene-AC56_RS17455;Dbxref=GenBank:WP_032278047.1;Name=WP_032278047.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ycaP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415426.1;locus_tag=AC56_RS17455;product=DUF421 domain-containing protein;protein_id=WP_032278047.1;transl_table=11
NZ_JJLS01000139.1	RefSeq	gene	13265	14353	.	+	.	ID=gene-AC56_RS17450;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=AC56_RS17450;old_locus_tag=AC56_0959
NZ_JJLS01000139.1	Protein Homology	CDS	13265	14353	.	+	0	ID=cds-WP_000057138.1;Parent=gene-AC56_RS17450;Dbxref=GenBank:WP_000057138.1;Name=WP_000057138.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415427.1;locus_tag=AC56_RS17450;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_000057138.1;transl_table=11
NZ_JJLS01000139.1	RefSeq	gene	14424	15707	.	+	.	ID=gene-AC56_RS17445;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=AC56_RS17445;old_locus_tag=AC56_0960
NZ_JJLS01000139.1	Protein Homology	CDS	14424	15707	.	+	0	ID=cds-WP_032278048.1;Parent=gene-AC56_RS17445;Dbxref=GenBank:WP_032278048.1;Name=WP_032278048.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309018.1;locus_tag=AC56_RS17445;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_032278048.1;transl_table=11
NZ_JJLS01000139.1	RefSeq	gene	15876	16640	.	+	.	ID=gene-AC56_RS17440;Name=ycaL;gbkey=Gene;gene=ycaL;gene_biotype=protein_coding;locus_tag=AC56_RS17440;old_locus_tag=AC56_0961
NZ_JJLS01000139.1	Protein Homology	CDS	15876	16640	.	+	0	ID=cds-WP_001295345.1;Parent=gene-AC56_RS17440;Dbxref=GenBank:WP_001295345.1;Name=WP_001295345.1;gbkey=CDS;gene=ycaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706828.2;locus_tag=AC56_RS17440;product=metallopeptidase YcaL;protein_id=WP_001295345.1;transl_table=11
NZ_JJLS01000139.1	RefSeq	gene	16813	17496	.	+	.	ID=gene-AC56_RS17435;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=AC56_RS17435;old_locus_tag=AC56_0962
NZ_JJLS01000139.1	Protein Homology	CDS	16813	17496	.	+	0	ID=cds-WP_000125016.1;Parent=gene-AC56_RS17435;Dbxref=GenBank:WP_000125016.1;Name=WP_000125016.1;Ontology_term=GO:0015949,GO:0004127,GO:0005524;gbkey=CDS;gene=cmk;go_function=(d)CMP kinase activity|0004127||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125007.1;locus_tag=AC56_RS17435;product=(d)CMP kinase;protein_id=WP_000125016.1;transl_table=11
NZ_JJLS01000139.1	RefSeq	gene	17607	19280	.	+	.	ID=gene-AC56_RS17430;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=AC56_RS17430;old_locus_tag=AC56_0963
NZ_JJLS01000139.1	Protein Homology	CDS	17607	19280	.	+	0	ID=cds-WP_000140327.1;Parent=gene-AC56_RS17430;Dbxref=GenBank:WP_000140327.1;Name=WP_000140327.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=AC56_RS17430;product=30S ribosomal protein S1;protein_id=WP_000140327.1;transl_table=11
NZ_JJLS01000139.1	RefSeq	gene	19440	19724	.	+	.	ID=gene-AC56_RS17425;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=AC56_RS17425;old_locus_tag=AC56_0964
NZ_JJLS01000139.1	Protein Homology	CDS	19440	19724	.	+	0	ID=cds-WP_000167336.1;Parent=gene-AC56_RS17425;Dbxref=GenBank:WP_000167336.1;Name=WP_000167336.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677,GO:0005694;gbkey=CDS;gene=ihfB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819309.1;locus_tag=AC56_RS17425;product=integration host factor subunit beta;protein_id=WP_000167336.1;transl_table=11
NZ_JJLS01000139.1	RefSeq	gene	19932	22196	.	+	.	ID=gene-AC56_RS17420;Name=ycaI;gbkey=Gene;gene=ycaI;gene_biotype=protein_coding;locus_tag=AC56_RS17420;old_locus_tag=AC56_0965
NZ_JJLS01000139.1	Protein Homology	CDS	19932	22196	.	+	0	ID=cds-WP_032278049.1;Parent=gene-AC56_RS17420;Dbxref=GenBank:WP_032278049.1;Name=WP_032278049.1;Ontology_term=GO:0030420,GO:0016020;gbkey=CDS;gene=ycaI;go_component=membrane|0016020||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415433.4;locus_tag=AC56_RS17420;product=ComEC family protein;protein_id=WP_032278049.1;transl_table=11
NZ_JJLS01000139.1	RefSeq	gene	22233	23981	.	+	.	ID=gene-AC56_RS17415;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=AC56_RS17415;old_locus_tag=AC56_0966
NZ_JJLS01000139.1	Protein Homology	CDS	22233	23981	.	+	0	ID=cds-WP_000551270.1;Parent=gene-AC56_RS17415;Dbxref=GenBank:WP_000551270.1;Name=WP_000551270.1;Ontology_term=GO:0055085,GO:0005524,GO:0034040,GO:0140359,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309024.1;locus_tag=AC56_RS17415;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=WP_000551270.1;transl_table=11
NZ_JJLS01000139.1	RefSeq	gene	23978	24964	.	+	.	ID=gene-AC56_RS17410;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=AC56_RS17410;old_locus_tag=AC56_0967
NZ_JJLS01000139.1	Protein Homology	CDS	23978	24964	.	+	0	ID=cds-WP_000570542.1;Parent=gene-AC56_RS17410;Dbxref=GenBank:WP_000570542.1;Name=WP_000570542.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309025.1;locus_tag=AC56_RS17410;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_000570542.1;transl_table=11
NZ_JJLS01000139.1	RefSeq	gene	25001	26233	.	+	.	ID=gene-AC56_RS17405;Name=ycaQ;gbkey=Gene;gene=ycaQ;gene_biotype=protein_coding;locus_tag=AC56_RS17405;old_locus_tag=AC56_0968
NZ_JJLS01000139.1	Protein Homology	CDS	25001	26233	.	+	0	ID=cds-WP_032278050.1;Parent=gene-AC56_RS17405;Dbxref=GenBank:WP_032278050.1;Name=WP_032278050.1;gbkey=CDS;gene=ycaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415436.1;locus_tag=AC56_RS17405;product=crosslink repair DNA glycosylase YcaQ;protein_id=WP_032278050.1;transl_table=11
NZ_JJLS01000139.1	RefSeq	gene	26285	26467	.	+	.	ID=gene-AC56_RS17400;Name=ycaR;gbkey=Gene;gene=ycaR;gene_biotype=protein_coding;locus_tag=AC56_RS17400;old_locus_tag=AC56_0969
NZ_JJLS01000139.1	Protein Homology	CDS	26285	26467	.	+	0	ID=cds-WP_000350058.1;Parent=gene-AC56_RS17400;Dbxref=GenBank:WP_000350058.1;Name=WP_000350058.1;gbkey=CDS;gene=ycaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309027.1;locus_tag=AC56_RS17400;product=protein YcaR;protein_id=WP_000350058.1;transl_table=11
NZ_JJLS01000139.1	RefSeq	gene	26464	27210	.	+	.	ID=gene-AC56_RS17395;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=AC56_RS17395;old_locus_tag=AC56_0970
NZ_JJLS01000139.1	Protein Homology	CDS	26464	27210	.	+	0	ID=cds-WP_032278051.1;Parent=gene-AC56_RS17395;Dbxref=GenBank:WP_032278051.1;Name=WP_032278051.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309028.1;locus_tag=AC56_RS17395;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_032278051.1;transl_table=11
NZ_JJLS01000139.1	RefSeq	gene	27364	28257	.	+	.	ID=gene-AC56_RS17390;Name=ycbJ;gbkey=Gene;gene=ycbJ;gene_biotype=protein_coding;locus_tag=AC56_RS17390;old_locus_tag=AC56_0971
NZ_JJLS01000139.1	Protein Homology	CDS	27364	28257	.	+	0	ID=cds-WP_000436922.1;Parent=gene-AC56_RS17390;Dbxref=GenBank:WP_000436922.1;Name=WP_000436922.1;gbkey=CDS;gene=ycbJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309029.1;locus_tag=AC56_RS17390;product=YcbJ family phosphotransferase;protein_id=WP_000436922.1;transl_table=11
NZ_JJLS01000139.1	RefSeq	gene	28234	29013	.	-	.	ID=gene-AC56_RS17385;Name=elyC;gbkey=Gene;gene=elyC;gene_biotype=protein_coding;locus_tag=AC56_RS17385;old_locus_tag=AC56_0972
NZ_JJLS01000139.1	Protein Homology	CDS	28234	29013	.	-	0	ID=cds-WP_000899599.1;Parent=gene-AC56_RS17385;Dbxref=GenBank:WP_000899599.1;Name=WP_000899599.1;gbkey=CDS;gene=elyC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706838.2;locus_tag=AC56_RS17385;product=envelope biogenesis factor ElyC;protein_id=WP_000899599.1;transl_table=11
NZ_JJLS01000139.1	RefSeq	gene	29149	29934	.	+	.	ID=gene-AC56_RS17380;Name=cmoM;gbkey=Gene;gene=cmoM;gene_biotype=protein_coding;locus_tag=AC56_RS17380;old_locus_tag=AC56_0973
NZ_JJLS01000139.1	Protein Homology	CDS	29149	29934	.	+	0	ID=cds-WP_001298300.1;Parent=gene-AC56_RS17380;Dbxref=GenBank:WP_001298300.1;Name=WP_001298300.1;gbkey=CDS;gene=cmoM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415441.1;locus_tag=AC56_RS17380;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;protein_id=WP_001298300.1;transl_table=11
NZ_JJLS01000139.1	RefSeq	gene	29931	31253	.	+	.	ID=gene-AC56_RS17375;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=AC56_RS17375;old_locus_tag=AC56_0974
NZ_JJLS01000139.1	Protein Homology	CDS	29931	31253	.	+	0	ID=cds-WP_001288850.1;Parent=gene-AC56_RS17375;Dbxref=GenBank:WP_001288850.1;Name=WP_001288850.1;Ontology_term=GO:0007059,GO:0005509;gbkey=CDS;gene=mukF;go_function=calcium ion binding|0005509||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=AC56_RS17375;product=chromosome partition protein MukF;protein_id=WP_001288850.1;transl_table=11
NZ_JJLS01000139.1	RefSeq	gene	31234	31938	.	+	.	ID=gene-AC56_RS17370;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=AC56_RS17370;old_locus_tag=AC56_0975
NZ_JJLS01000139.1	Protein Homology	CDS	31234	31938	.	+	0	ID=cds-WP_001295931.1;Parent=gene-AC56_RS17370;Dbxref=GenBank:WP_001295931.1;Name=WP_001295931.1;Ontology_term=GO:0007059,GO:0030261;gbkey=CDS;gene=mukE;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459968.1;locus_tag=AC56_RS17370;product=chromosome partition protein MukE;protein_id=WP_001295931.1;transl_table=11
NZ_JJLS01000139.1	RefSeq	gene	31938	36398	.	+	.	ID=gene-AC56_RS17365;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=AC56_RS17365;old_locus_tag=AC56_0976
NZ_JJLS01000139.1	Protein Homology	CDS	31938	36398	.	+	0	ID=cds-WP_032278052.1;Parent=gene-AC56_RS17365;Dbxref=GenBank:WP_032278052.1;Name=WP_032278052.1;Ontology_term=GO:0007059,GO:0030261,GO:0003677;gbkey=CDS;gene=mukB;go_function=DNA binding|0003677||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309034.1;locus_tag=AC56_RS17365;product=chromosome partition protein MukB;protein_id=WP_032278052.1;transl_table=11
NZ_JJLS01000139.1	RefSeq	gene	36659	38506	.	+	.	ID=gene-AC56_RS17360;Name=ldtD;gbkey=Gene;gene=ldtD;gene_biotype=protein_coding;locus_tag=AC56_RS17360;old_locus_tag=AC56_0977
NZ_JJLS01000139.1	Protein Homology	CDS	36659	38506	.	+	0	ID=cds-WP_032278053.1;Parent=gene-AC56_RS17360;Dbxref=GenBank:WP_032278053.1;Name=WP_032278053.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415445.1;locus_tag=AC56_RS17360;product=L%2CD-transpeptidase;protein_id=WP_032278053.1;transl_table=11
NZ_JJLS01000139.1	RefSeq	gene	38687	39235	.	+	.	ID=gene-AC56_RS17355;Name=mepK;gbkey=Gene;gene=mepK;gene_biotype=protein_coding;locus_tag=AC56_RS17355;old_locus_tag=AC56_0978
NZ_JJLS01000139.1	Protein Homology	CDS	38687	39235	.	+	0	ID=cds-WP_001295932.1;Parent=gene-AC56_RS17355;Dbxref=GenBank:WP_001295932.1;Name=WP_001295932.1;gbkey=CDS;gene=mepK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309036.1;locus_tag=AC56_RS17355;product=YcbK family protein;protein_id=WP_001295932.1;transl_table=11
NZ_JJLS01000139.1	RefSeq	gene	39262	39909	.	+	.	ID=gene-AC56_RS17350;Name=gloC;gbkey=Gene;gene=gloC;gene_biotype=protein_coding;locus_tag=AC56_RS17350;old_locus_tag=AC56_0979
NZ_JJLS01000139.1	Protein Homology	CDS	39262	39909	.	+	0	ID=cds-WP_001109486.1;Parent=gene-AC56_RS17350;Dbxref=GenBank:WP_001109486.1;Name=WP_001109486.1;gbkey=CDS;gene=gloC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035823.1;locus_tag=AC56_RS17350;product=hydroxyacylglutathione hydrolase GloC;protein_id=WP_001109486.1;transl_table=11
NZ_JJLS01000139.1	RefSeq	gene	40131	41321	.	-	.	ID=gene-AC56_RS17345;Name=aspC;gbkey=Gene;gene=aspC;gene_biotype=protein_coding;locus_tag=AC56_RS17345;old_locus_tag=AC56_0980
NZ_JJLS01000139.1	Protein Homology	CDS	40131	41321	.	-	0	ID=cds-WP_000462687.1;Parent=gene-AC56_RS17345;Dbxref=GenBank:WP_000462687.1;Name=WP_000462687.1;gbkey=CDS;gene=aspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653304.1;locus_tag=AC56_RS17345;product=aspartate transaminase;protein_id=WP_000462687.1;transl_table=11
NZ_JJLS01000139.1	RefSeq	gene	41506	42594	.	-	.	ID=gene-AC56_RS17340;Name=ompF;gbkey=Gene;gene=ompF;gene_biotype=protein_coding;locus_tag=AC56_RS17340;old_locus_tag=AC56_0981
NZ_JJLS01000139.1	Protein Homology	CDS	41506	42594	.	-	0	ID=cds-WP_000977907.1;Parent=gene-AC56_RS17340;Dbxref=GenBank:WP_000977907.1;Name=WP_000977907.1;gbkey=CDS;gene=ompF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415449.1;locus_tag=AC56_RS17340;product=porin OmpF;protein_id=WP_000977907.1;transl_table=11
NZ_JJLS01000139.1	RefSeq	gene	43196	44596	.	-	.	ID=gene-AC56_RS17335;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=AC56_RS17335;old_locus_tag=AC56_0982
NZ_JJLS01000139.1	Protein Homology	CDS	43196	44596	.	-	0	ID=cds-WP_000117881.1;Parent=gene-AC56_RS17335;Dbxref=GenBank:WP_000117881.1;Name=WP_000117881.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1;locus_tag=AC56_RS17335;product=asparagine--tRNA ligase;protein_id=WP_000117881.1;transl_table=11
NZ_JJLS01000139.1	RefSeq	gene	44765	45967	.	-	.	ID=gene-AC56_RS17330;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=AC56_RS17330;old_locus_tag=AC56_0983
NZ_JJLS01000139.1	Protein Homology	CDS	44765	45967	.	-	0	ID=cds-WP_001307697.1;Parent=gene-AC56_RS17330;Dbxref=GenBank:WP_001307697.1;Name=WP_001307697.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415451.1;locus_tag=AC56_RS17330;product=nicotinate phosphoribosyltransferase;protein_id=WP_001307697.1;transl_table=11
NZ_JJLS01000139.1	RefSeq	gene	46233	48845	.	+	.	ID=gene-AC56_RS17325;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=AC56_RS17325;old_locus_tag=AC56_0985
NZ_JJLS01000139.1	Protein Homology	CDS	46233	48845	.	+	0	ID=cds-WP_000193844.1;Parent=gene-AC56_RS17325;Dbxref=GenBank:WP_000193844.1;Name=WP_000193844.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237,GO:0008270;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193787.1;locus_tag=AC56_RS17325;product=aminopeptidase N;protein_id=WP_000193844.1;transl_table=11
NZ_JJLS01000139.1	RefSeq	gene	48888	49655	.	-	.	ID=gene-AC56_RS17320;Name=ssuB;gbkey=Gene;gene=ssuB;gene_biotype=protein_coding;locus_tag=AC56_RS17320;old_locus_tag=AC56_0986
NZ_JJLS01000139.1	Protein Homology	CDS	48888	49655	.	-	0	ID=cds-WP_001090506.1;Parent=gene-AC56_RS17320;Dbxref=GenBank:WP_001090506.1;Name=WP_001090506.1;Ontology_term=GO:0005524;gbkey=CDS;gene=ssuB;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309043.1;locus_tag=AC56_RS17320;product=aliphatic sulfonates ABC transporter ATP-binding protein;protein_id=WP_001090506.1;transl_table=11
NZ_JJLS01000139.1	RefSeq	gene	49652	50443	.	-	.	ID=gene-AC56_RS17315;Name=ssuC;gbkey=Gene;gene=ssuC;gene_biotype=protein_coding;locus_tag=AC56_RS17315;old_locus_tag=AC56_0987
NZ_JJLS01000139.1	Protein Homology	CDS	49652	50443	.	-	0	ID=cds-WP_000235203.1;Parent=gene-AC56_RS17315;Dbxref=GenBank:WP_000235203.1;Name=WP_000235203.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=ssuC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415454.4;locus_tag=AC56_RS17315;product=aliphatic sulfonate ABC transporter permease SsuC;protein_id=WP_000235203.1;transl_table=11
NZ_JJLS01000139.1	RefSeq	gene	50454	51599	.	-	.	ID=gene-AC56_RS17310;Name=ssuD;gbkey=Gene;gene=ssuD;gene_biotype=protein_coding;locus_tag=AC56_RS17310;old_locus_tag=AC56_0988
NZ_JJLS01000139.1	Protein Homology	CDS	50454	51599	.	-	0	ID=cds-WP_032278054.1;Parent=gene-AC56_RS17310;Dbxref=GenBank:WP_032278054.1;Name=WP_032278054.1;Ontology_term=GO:0006790,GO:0008726,GO:0010181;gbkey=CDS;gene=ssuD;go_function=alkanesulfonate monooxygenase activity|0008726||IEA,FMN binding|0010181||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415455.1;locus_tag=AC56_RS17310;product=FMNH2-dependent alkanesulfonate monooxygenase;protein_id=WP_032278054.1;transl_table=11
NZ_JJLS01000139.1	RefSeq	gene	51596	52555	.	-	.	ID=gene-AC56_RS17305;Name=ssuA;gbkey=Gene;gene=ssuA;gene_biotype=protein_coding;locus_tag=AC56_RS17305;old_locus_tag=AC56_0989
NZ_JJLS01000139.1	Protein Homology	CDS	51596	52555	.	-	0	ID=cds-WP_001244308.1;Parent=gene-AC56_RS17305;Dbxref=GenBank:WP_001244308.1;Name=WP_001244308.1;gbkey=CDS;gene=ssuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415456.4;locus_tag=AC56_RS17305;product=aliphatic sulfonate ABC transporter substrate-binding protein SsuA;protein_id=WP_001244308.1;transl_table=11
NZ_JJLS01000139.1	RefSeq	gene	52548	53123	.	-	.	ID=gene-AC56_RS17300;Name=ssuE;gbkey=Gene;gene=ssuE;gene_biotype=protein_coding;locus_tag=AC56_RS17300;old_locus_tag=AC56_0990
NZ_JJLS01000139.1	Protein Homology	CDS	52548	53123	.	-	0	ID=cds-WP_032278055.1;Parent=gene-AC56_RS17300;Dbxref=GenBank:WP_032278055.1;Name=WP_032278055.1;Ontology_term=GO:0046306,GO:0008752;gbkey=CDS;gene=ssuE;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA;go_process=alkanesulfonate catabolic process|0046306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415457.1;locus_tag=AC56_RS17300;product=NADPH-dependent FMN reductase;protein_id=WP_032278055.1;transl_table=11
NZ_JJLS01000139.1	RefSeq	gene	53479	54018	.	+	.	ID=gene-AC56_RS17295;Name=elfA;gbkey=Gene;gene=elfA;gene_biotype=protein_coding;locus_tag=AC56_RS17295;old_locus_tag=AC56_0991
NZ_JJLS01000139.1	Protein Homology	CDS	53479	54018	.	+	0	ID=cds-WP_000750293.1;Parent=gene-AC56_RS17295;Dbxref=GenBank:WP_000750293.1;Name=WP_000750293.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=elfA;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415458.2;locus_tag=AC56_RS17295;product=fimbrial protein;protein_id=WP_000750293.1;transl_table=11
NZ_JJLS01000139.1	RefSeq	gene	54101	54802	.	+	.	ID=gene-AC56_RS17290;Name=elfD;gbkey=Gene;gene=elfD;gene_biotype=protein_coding;locus_tag=AC56_RS17290;old_locus_tag=AC56_0992
NZ_JJLS01000139.1	Protein Homology	CDS	54101	54802	.	+	0	ID=cds-WP_001295349.1;Parent=gene-AC56_RS17290;Dbxref=GenBank:WP_001295349.1;Name=WP_001295349.1;Ontology_term=GO:0043711,GO:0061077,GO:0030288;gbkey=CDS;gene=elfD;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=pilus organization|0043711||IEA,chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415459.1;locus_tag=AC56_RS17290;product=fimbrial biogenesis chaperone;protein_id=WP_001295349.1;transl_table=11
NZ_JJLS01000139.1	RefSeq	gene	54827	57427	.	+	.	ID=gene-AC56_RS17285;Name=elfC;gbkey=Gene;gene=elfC;gene_biotype=protein_coding;locus_tag=AC56_RS17285;old_locus_tag=AC56_0993
NZ_JJLS01000139.1	Protein Homology	CDS	54827	57427	.	+	0	ID=cds-WP_000286312.1;Parent=gene-AC56_RS17285;Dbxref=GenBank:WP_000286312.1;Name=WP_000286312.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;gene=elfC;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415460.1;locus_tag=AC56_RS17285;product=fimbrial biogenesis usher protein;protein_id=WP_000286312.1;transl_table=11
NZ_JJLS01000139.1	RefSeq	pseudogene	57418	57681	.	+	.	ID=gene-AC56_RS0125445;Name=AC56_RS0125445;end_range=57681,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0125445;old_locus_tag=AC56_0994;partial=true;pseudo=true
NZ_JJLS01000139.1	Protein Homology	CDS	57418	57681	.	+	0	ID=cds-AC56_RS0125445;Parent=gene-AC56_RS0125445;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=57681,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415461.1;locus_tag=AC56_RS0125445;partial=true;product=fimbrial protein;pseudo=true;transl_table=11
NZ_JJLS01000139.1	RefSeq	gene	57716	58098	.	+	.	ID=gene-AC56_RS17280;Name=AC56_RS17280;end_range=58098,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS17280;old_locus_tag=AC56_0995;partial=true
NZ_JJLS01000139.1	Protein Homology	CDS	57716	58098	.	+	0	ID=cds-WP_032282608.1;Parent=gene-AC56_RS17280;Dbxref=GenBank:WP_032282608.1;Name=WP_032282608.1;end_range=58098,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS17280;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032282608.1;transl_table=11
##sequence-region NZ_JJLS01000140.1 1 47432
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000140.1	RefSeq	region	1	47432	.	+	.	ID=NZ_JJLS01000140.1:1..47432;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000140.1	RefSeq	gene	1	342	.	+	.	ID=gene-AC56_RS17275;Name=AC56_RS17275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS17275;old_locus_tag=AC56_0996;partial=true;start_range=.,1
NZ_JJLS01000140.1	Protein Homology	CDS	1	342	.	+	0	ID=cds-WP_032282491.1-2;Parent=gene-AC56_RS17275;Dbxref=GenBank:WP_032282491.1;Name=WP_032282491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011410900.1;locus_tag=AC56_RS17275;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032282491.1;start_range=.,1;transl_table=11
NZ_JJLS01000140.1	RefSeq	pseudogene	400	1212	.	+	.	ID=gene-AC56_RS17270;Name=AC56_RS17270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS17270;old_locus_tag=AC56_0997;partial=true;pseudo=true;start_range=.,400
NZ_JJLS01000140.1	Protein Homology	CDS	400	1212	.	+	0	ID=cds-AC56_RS17270;Parent=gene-AC56_RS17270;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415461.1;locus_tag=AC56_RS17270;partial=true;product=fimbrial protein;pseudo=true;start_range=.,400;transl_table=11
NZ_JJLS01000140.1	RefSeq	gene	1224	1766	.	+	.	ID=gene-AC56_RS17265;Name=ycbU;gbkey=Gene;gene=ycbU;gene_biotype=protein_coding;locus_tag=AC56_RS17265;old_locus_tag=AC56_0998
NZ_JJLS01000140.1	Protein Homology	CDS	1224	1766	.	+	0	ID=cds-WP_000730614.1;Parent=gene-AC56_RS17265;Dbxref=GenBank:WP_000730614.1;Name=WP_000730614.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=ycbU;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415462.1;locus_tag=AC56_RS17265;product=fimbrial protein;protein_id=WP_000730614.1;transl_table=11
NZ_JJLS01000140.1	RefSeq	gene	1774	2289	.	+	.	ID=gene-AC56_RS17260;Name=ycbV;gbkey=Gene;gene=ycbV;gene_biotype=protein_coding;locus_tag=AC56_RS17260;old_locus_tag=AC56_0999
NZ_JJLS01000140.1	Protein Homology	CDS	1774	2289	.	+	0	ID=cds-WP_000919497.1;Parent=gene-AC56_RS17260;Dbxref=GenBank:WP_000919497.1;Name=WP_000919497.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=ycbV;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415463.2;locus_tag=AC56_RS17260;product=fimbrial protein;protein_id=WP_000919497.1;transl_table=11
NZ_JJLS01000140.1	RefSeq	gene	2255	2992	.	+	.	ID=gene-AC56_RS17255;Name=ycbF;gbkey=Gene;gene=ycbF;gene_biotype=protein_coding;locus_tag=AC56_RS17255;old_locus_tag=AC56_1000
NZ_JJLS01000140.1	Protein Homology	CDS	2255	2992	.	+	0	ID=cds-WP_162535347.1;Parent=gene-AC56_RS17255;Dbxref=GenBank:WP_162535347.1;Name=WP_162535347.1;gbkey=CDS;gene=ycbF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706867.1;locus_tag=AC56_RS17255;product=fimbrial chaperone;protein_id=WP_162535347.1;transl_table=11
NZ_JJLS01000140.1	RefSeq	gene	3103	4113	.	+	.	ID=gene-AC56_RS17250;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=AC56_RS17250;old_locus_tag=AC56_1001
NZ_JJLS01000140.1	Protein Homology	CDS	3103	4113	.	+	0	ID=cds-WP_001295352.1;Parent=gene-AC56_RS17250;Dbxref=GenBank:WP_001295352.1;Name=WP_001295352.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309056.1;locus_tag=AC56_RS17250;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_001295352.1;transl_table=11
NZ_JJLS01000140.1	RefSeq	gene	4287	4829	.	+	.	ID=gene-AC56_RS17245;Name=zapC;gbkey=Gene;gene=zapC;gene_biotype=protein_coding;locus_tag=AC56_RS17245;old_locus_tag=AC56_1002
NZ_JJLS01000140.1	Protein Homology	CDS	4287	4829	.	+	0	ID=cds-WP_001295353.1;Parent=gene-AC56_RS17245;Dbxref=GenBank:WP_001295353.1;Name=WP_001295353.1;gbkey=CDS;gene=zapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415466.4;locus_tag=AC56_RS17245;product=cell division protein ZapC;protein_id=WP_001295353.1;transl_table=11
NZ_JJLS01000140.1	RefSeq	gene	4826	5935	.	-	.	ID=gene-AC56_RS17240;Name=ycbX;gbkey=Gene;gene=ycbX;gene_biotype=protein_coding;locus_tag=AC56_RS17240;old_locus_tag=AC56_1003
NZ_JJLS01000140.1	Protein Homology	CDS	4826	5935	.	-	0	ID=cds-WP_032278061.1;Parent=gene-AC56_RS17240;Dbxref=GenBank:WP_032278061.1;Name=WP_032278061.1;gbkey=CDS;gene=ycbX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415467.1;locus_tag=AC56_RS17240;product=6-N-hydroxylaminopurine resistance protein YcbX;protein_id=WP_032278061.1;transl_table=11
NZ_JJLS01000140.1	RefSeq	gene	6179	8287	.	+	.	ID=gene-AC56_RS17235;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=AC56_RS17235;old_locus_tag=AC56_1004
NZ_JJLS01000140.1	Protein Homology	CDS	6179	8287	.	+	0	ID=cds-WP_032278062.1;Parent=gene-AC56_RS17235;Dbxref=GenBank:WP_032278062.1;Name=WP_032278062.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415468.1;locus_tag=AC56_RS17235;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WP_032278062.1;transl_table=11
NZ_JJLS01000140.1	RefSeq	gene	8299	10206	.	+	.	ID=gene-AC56_RS17230;Name=uup;gbkey=Gene;gene=uup;gene_biotype=protein_coding;locus_tag=AC56_RS17230;old_locus_tag=AC56_1005
NZ_JJLS01000140.1	Protein Homology	CDS	8299	10206	.	+	0	ID=cds-WP_000053099.1;Parent=gene-AC56_RS17230;Dbxref=GenBank:WP_000053099.1;Name=WP_000053099.1;Ontology_term=GO:0005524;gbkey=CDS;gene=uup;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415469.1;locus_tag=AC56_RS17230;product=ABC transporter ATP-binding protein;protein_id=WP_000053099.1;transl_table=11
NZ_JJLS01000140.1	RefSeq	gene	10336	11589	.	+	.	ID=gene-AC56_RS17225;Name=pqiA;gbkey=Gene;gene=pqiA;gene_biotype=protein_coding;locus_tag=AC56_RS17225;old_locus_tag=AC56_1006
NZ_JJLS01000140.1	Protein Homology	CDS	10336	11589	.	+	0	ID=cds-WP_000333176.1;Parent=gene-AC56_RS17225;Dbxref=GenBank:WP_000333176.1;Name=WP_000333176.1;gbkey=CDS;gene=pqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415470.1;locus_tag=AC56_RS17225;product=membrane integrity-associated transporter subunit PqiA;protein_id=WP_000333176.1;transl_table=11
NZ_JJLS01000140.1	RefSeq	gene	11594	13234	.	+	.	ID=gene-AC56_RS17220;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=AC56_RS17220;old_locus_tag=AC56_1007
NZ_JJLS01000140.1	Protein Homology	CDS	11594	13234	.	+	0	ID=cds-WP_000445533.1;Parent=gene-AC56_RS17220;Dbxref=GenBank:WP_000445533.1;Name=WP_000445533.1;gbkey=CDS;gene=pqiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415471.1;locus_tag=AC56_RS17220;product=intermembrane transport protein PqiB;protein_id=WP_000445533.1;transl_table=11
NZ_JJLS01000140.1	RefSeq	gene	13231	13794	.	+	.	ID=gene-AC56_RS17215;Name=pqiC;gbkey=Gene;gene=pqiC;gene_biotype=protein_coding;locus_tag=AC56_RS17215;old_locus_tag=AC56_1008
NZ_JJLS01000140.1	Protein Homology	CDS	13231	13794	.	+	0	ID=cds-WP_000759120.1;Parent=gene-AC56_RS17215;Dbxref=GenBank:WP_000759120.1;Name=WP_000759120.1;gbkey=CDS;gene=pqiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706875.1;locus_tag=AC56_RS17215;product=membrane integrity-associated transporter subunit PqiC;protein_id=WP_000759120.1;transl_table=11
NZ_JJLS01000140.1	RefSeq	gene	14050	14217	.	+	.	ID=gene-AC56_RS0125450;Name=rmf;gbkey=Gene;gene=rmf;gene_biotype=protein_coding;locus_tag=AC56_RS0125450
NZ_JJLS01000140.1	Protein Homology	CDS	14050	14217	.	+	0	ID=cds-WP_000828648.1;Parent=gene-AC56_RS0125450;Dbxref=GenBank:WP_000828648.1;Name=WP_000828648.1;Ontology_term=GO:0141014,GO:0043022;gbkey=CDS;gene=rmf;go_function=ribosome binding|0043022||IEA;go_process=ribosome hibernation|0141014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309064.1;locus_tag=AC56_RS0125450;product=ribosome modulation factor;protein_id=WP_000828648.1;transl_table=11
NZ_JJLS01000140.1	RefSeq	gene	14287	14805	.	-	.	ID=gene-AC56_RS17210;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=AC56_RS17210;old_locus_tag=AC56_1009
NZ_JJLS01000140.1	Protein Homology	CDS	14287	14805	.	-	0	ID=cds-WP_032278070.1;Parent=gene-AC56_RS17210;Dbxref=GenBank:WP_032278070.1;Name=WP_032278070.1;Ontology_term=GO:0006633,GO:0019171;gbkey=CDS;gene=fabA;go_function=(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity|0019171||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014915875.1;locus_tag=AC56_RS17210;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=WP_032278070.1;transl_table=11
NZ_JJLS01000140.1	RefSeq	gene	14874	16634	.	-	.	ID=gene-AC56_RS17205;Name=ycbZ;gbkey=Gene;gene=ycbZ;gene_biotype=protein_coding;locus_tag=AC56_RS17205;old_locus_tag=AC56_1010
NZ_JJLS01000140.1	Protein Homology	CDS	14874	16634	.	-	0	ID=cds-WP_032278064.1;Parent=gene-AC56_RS17205;Dbxref=GenBank:WP_032278064.1;Name=WP_032278064.1;gbkey=CDS;gene=ycbZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415475.1;locus_tag=AC56_RS17205;product=AAA family ATPase;protein_id=WP_032278064.1;transl_table=11
NZ_JJLS01000140.1	RefSeq	gene	16820	17272	.	+	.	ID=gene-AC56_RS17200;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;locus_tag=AC56_RS17200;old_locus_tag=AC56_1011
NZ_JJLS01000140.1	Protein Homology	CDS	16820	17272	.	+	0	ID=cds-WP_000877161.1;Parent=gene-AC56_RS17200;Dbxref=GenBank:WP_000877161.1;Name=WP_000877161.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=matP;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309067.1;locus_tag=AC56_RS17200;product=macrodomain Ter protein MatP;protein_id=WP_000877161.1;transl_table=11
NZ_JJLS01000140.1	RefSeq	gene	17348	18388	.	-	.	ID=gene-AC56_RS17195;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=AC56_RS17195;old_locus_tag=AC56_1012
NZ_JJLS01000140.1	Protein Homology	CDS	17348	18388	.	-	0	ID=cds-WP_000750416.1;Parent=gene-AC56_RS17195;Dbxref=GenBank:WP_000750416.1;Name=WP_000750416.1;gbkey=CDS;gene=ompA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309068.1;locus_tag=AC56_RS17195;product=porin OmpA;protein_id=WP_000750416.1;transl_table=11
NZ_JJLS01000140.1	RefSeq	gene	18745	19254	.	-	.	ID=gene-AC56_RS17190;Name=sulA;gbkey=Gene;gene=sulA;gene_biotype=protein_coding;locus_tag=AC56_RS17190;old_locus_tag=AC56_1013
NZ_JJLS01000140.1	Protein Homology	CDS	18745	19254	.	-	0	ID=cds-WP_000288710.1;Parent=gene-AC56_RS17190;Dbxref=GenBank:WP_000288710.1;Name=WP_000288710.1;Ontology_term=GO:0009432,GO:0051782,GO:0005515;gbkey=CDS;gene=sulA;go_function=protein binding|0005515||IEA;go_process=SOS response|0009432||IEA,negative regulation of cell division|0051782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309069.1;locus_tag=AC56_RS17190;product=SOS-induced cell division inhibitor SulA;protein_id=WP_000288710.1;transl_table=11
NZ_JJLS01000140.1	RefSeq	gene	19473	20102	.	+	.	ID=gene-AC56_RS17185;Name=sxy;gbkey=Gene;gene=sxy;gene_biotype=protein_coding;locus_tag=AC56_RS17185;old_locus_tag=AC56_1014
NZ_JJLS01000140.1	Protein Homology	CDS	19473	20102	.	+	0	ID=cds-WP_000839153.1;Parent=gene-AC56_RS17185;Dbxref=GenBank:WP_000839153.1;Name=WP_000839153.1;gbkey=CDS;gene=sxy;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415479.1;locus_tag=AC56_RS17185;product=CRP-S regulon transcriptional coactivator Sxy;protein_id=WP_000839153.1;transl_table=11
NZ_JJLS01000140.1	RefSeq	gene	20065	22227	.	-	.	ID=gene-AC56_RS17180;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=AC56_RS17180;old_locus_tag=AC56_1015
NZ_JJLS01000140.1	Protein Homology	CDS	20065	22227	.	-	0	ID=cds-WP_000875061.1;Parent=gene-AC56_RS17180;Dbxref=GenBank:WP_000875061.1;Name=WP_000875061.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309071.3;locus_tag=AC56_RS17180;product=YccS family putative transporter;protein_id=WP_000875061.1;transl_table=11
NZ_JJLS01000140.1	RefSeq	gene	22237	22683	.	-	.	ID=gene-AC56_RS17175;Name=yccF;gbkey=Gene;gene=yccF;gene_biotype=protein_coding;locus_tag=AC56_RS17175;old_locus_tag=AC56_1016
NZ_JJLS01000140.1	Protein Homology	CDS	22237	22683	.	-	0	ID=cds-WP_001261235.1;Parent=gene-AC56_RS17175;Dbxref=GenBank:WP_001261235.1;Name=WP_001261235.1;gbkey=CDS;gene=yccF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415481.1;locus_tag=AC56_RS17175;product=YccF domain-containing protein;protein_id=WP_001261235.1;transl_table=11
NZ_JJLS01000140.1	RefSeq	gene	22806	24860	.	+	.	ID=gene-AC56_RS17170;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=AC56_RS17170;old_locus_tag=AC56_1017
NZ_JJLS01000140.1	Protein Homology	CDS	22806	24860	.	+	0	ID=cds-WP_001295354.1;Parent=gene-AC56_RS17170;Dbxref=GenBank:WP_001295354.1;Name=WP_001295354.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=helD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415482.1;locus_tag=AC56_RS17170;product=DNA helicase IV;protein_id=WP_001295354.1;transl_table=11
NZ_JJLS01000140.1	RefSeq	gene	24892	25350	.	-	.	ID=gene-AC56_RS17165;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=AC56_RS17165;old_locus_tag=AC56_1018
NZ_JJLS01000140.1	Protein Homology	CDS	24892	25350	.	-	0	ID=cds-WP_000424181.1;Parent=gene-AC56_RS17165;Dbxref=GenBank:WP_000424181.1;Name=WP_000424181.1;Ontology_term=GO:0006007,GO:0019242,GO:0008929;gbkey=CDS;gene=mgsA;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=glucose catabolic process|0006007||IEA,methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415483.2;locus_tag=AC56_RS17165;product=methylglyoxal synthase;protein_id=WP_000424181.1;transl_table=11
NZ_JJLS01000140.1	RefSeq	gene	25446	26108	.	-	.	ID=gene-AC56_RS17160;Name=csgI;gbkey=Gene;gene=csgI;gene_biotype=protein_coding;locus_tag=AC56_RS17160;old_locus_tag=AC56_1019
NZ_JJLS01000140.1	Protein Homology	CDS	25446	26108	.	-	0	ID=cds-WP_000847785.1;Parent=gene-AC56_RS17160;Dbxref=GenBank:WP_000847785.1;Name=WP_000847785.1;gbkey=CDS;gene=csgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309075.1;locus_tag=AC56_RS17160;product=DUF2057 family protein;protein_id=WP_000847785.1;transl_table=11
NZ_JJLS01000140.1	RefSeq	gene	26281	26694	.	+	.	ID=gene-AC56_RS17150;Name=yccU;gbkey=Gene;gene=yccU;gene_biotype=protein_coding;locus_tag=AC56_RS17150;old_locus_tag=AC56_1021
NZ_JJLS01000140.1	Protein Homology	CDS	26281	26694	.	+	0	ID=cds-WP_000665217.1;Parent=gene-AC56_RS17150;Dbxref=GenBank:WP_000665217.1;Name=WP_000665217.1;Ontology_term=GO:0120225;gbkey=CDS;gene=yccU;go_function=coenzyme A binding|0120225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309076.1;locus_tag=AC56_RS17150;product=CoA-binding protein;protein_id=WP_000665217.1;transl_table=11
NZ_JJLS01000140.1	RefSeq	gene	26739	27056	.	-	.	ID=gene-AC56_RS17145;Name=hspQ;gbkey=Gene;gene=hspQ;gene_biotype=protein_coding;locus_tag=AC56_RS17145;old_locus_tag=AC56_1022
NZ_JJLS01000140.1	Protein Homology	CDS	26739	27056	.	-	0	ID=cds-WP_001295356.1;Parent=gene-AC56_RS17145;Dbxref=GenBank:WP_001295356.1;Name=WP_001295356.1;gbkey=CDS;gene=hspQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123508.1;locus_tag=AC56_RS17145;product=heat shock protein HspQ;protein_id=WP_001295356.1;transl_table=11
NZ_JJLS01000140.1	RefSeq	gene	27114	28304	.	-	.	ID=gene-AC56_RS17140;Name=rlmI;gbkey=Gene;gene=rlmI;gene_biotype=protein_coding;locus_tag=AC56_RS17140;old_locus_tag=AC56_1023
NZ_JJLS01000140.1	Protein Homology	CDS	27114	28304	.	-	0	ID=cds-WP_001648649.1;Parent=gene-AC56_RS17140;Dbxref=GenBank:WP_001648649.1;Name=WP_001648649.1;Ontology_term=GO:0003723,GO:0008649;gbkey=CDS;gene=rlmI;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415487.4;locus_tag=AC56_RS17140;product=23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI;protein_id=WP_001648649.1;transl_table=11
NZ_JJLS01000140.1	RefSeq	gene	28399	28677	.	+	.	ID=gene-AC56_RS17135;Name=yccX;gbkey=Gene;gene=yccX;gene_biotype=protein_coding;locus_tag=AC56_RS17135;old_locus_tag=AC56_1024
NZ_JJLS01000140.1	Protein Homology	CDS	28399	28677	.	+	0	ID=cds-WP_001485659.1;Parent=gene-AC56_RS17135;Dbxref=GenBank:WP_001485659.1;Name=WP_001485659.1;Ontology_term=GO:0003998;gbkey=CDS;gene=yccX;go_function=acylphosphatase activity|0003998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309079.1;locus_tag=AC56_RS17135;product=acylphosphatase;protein_id=WP_001485659.1;transl_table=11
NZ_JJLS01000140.1	RefSeq	gene	28674	29003	.	-	.	ID=gene-AC56_RS17130;Name=tusE;gbkey=Gene;gene=tusE;gene_biotype=protein_coding;locus_tag=AC56_RS17130;old_locus_tag=AC56_1025
NZ_JJLS01000140.1	Protein Homology	CDS	28674	29003	.	-	0	ID=cds-WP_000904442.1;Parent=gene-AC56_RS17130;Dbxref=GenBank:WP_000904442.1;Name=WP_000904442.1;gbkey=CDS;gene=tusE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309080.2;locus_tag=AC56_RS17130;product=sulfurtransferase TusE;protein_id=WP_000904442.1;transl_table=11
NZ_JJLS01000140.1	RefSeq	gene	29094	29753	.	-	.	ID=gene-AC56_RS17125;Name=yccA;gbkey=Gene;gene=yccA;gene_biotype=protein_coding;locus_tag=AC56_RS17125;old_locus_tag=AC56_1026
NZ_JJLS01000140.1	Protein Homology	CDS	29094	29753	.	-	0	ID=cds-WP_000375136.1;Parent=gene-AC56_RS17125;Dbxref=GenBank:WP_000375136.1;Name=WP_000375136.1;gbkey=CDS;gene=yccA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000375124.1;locus_tag=AC56_RS17125;product=FtsH protease modulator YccA;protein_id=WP_000375136.1;transl_table=11
NZ_JJLS01000140.1	RefSeq	gene	29960	30047	.	-	.	ID=gene-AC56_RS17120;Name=AC56_RS17120;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS17120;old_locus_tag=AC56_1027
NZ_JJLS01000140.1	tRNAscan-SE	tRNA	29960	30047	.	-	.	ID=rna-AC56_RS17120;Parent=gene-AC56_RS17120;anticodon=(pos:complement(30011..30013));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS17120;product=tRNA-Ser
NZ_JJLS01000140.1	tRNAscan-SE	exon	29960	30047	.	-	.	ID=exon-AC56_RS17120-1;Parent=rna-AC56_RS17120;anticodon=(pos:complement(30011..30013));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS17120;product=tRNA-Ser
NZ_JJLS01000140.1	RefSeq	gene	30474	31592	.	+	.	ID=gene-AC56_RS17115;Name=hyaA;gbkey=Gene;gene=hyaA;gene_biotype=protein_coding;locus_tag=AC56_RS17115;old_locus_tag=AC56_1028
NZ_JJLS01000140.1	Protein Homology	CDS	30474	31592	.	+	0	ID=cds-WP_001058323.1;Parent=gene-AC56_RS17115;Dbxref=GenBank:WP_001058323.1;Name=WP_001058323.1;gbkey=CDS;gene=hyaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415491.1;locus_tag=AC56_RS17115;product=hydrogenase 1 small subunit;protein_id=WP_001058323.1;transl_table=11
NZ_JJLS01000140.1	RefSeq	gene	31589	33382	.	+	.	ID=gene-AC56_RS17110;Name=hyaB;gbkey=Gene;gene=hyaB;gene_biotype=protein_coding;locus_tag=AC56_RS17110;old_locus_tag=AC56_1029
NZ_JJLS01000140.1	Protein Homology	CDS	31589	33382	.	+	0	ID=cds-WP_000107384.1;Parent=gene-AC56_RS17110;Dbxref=GenBank:WP_000107384.1;Name=WP_000107384.1;gbkey=CDS;gene=hyaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415492.1;locus_tag=AC56_RS17110;product=Ni/Fe-hydrogenase large subunit;protein_id=WP_000107384.1;transl_table=11
NZ_JJLS01000140.1	RefSeq	gene	33401	34108	.	+	.	ID=gene-AC56_RS17105;Name=hyaC;gbkey=Gene;gene=hyaC;gene_biotype=protein_coding;locus_tag=AC56_RS17105;old_locus_tag=AC56_1030
NZ_JJLS01000140.1	Protein Homology	CDS	33401	34108	.	+	0	ID=cds-WP_001186424.1;Parent=gene-AC56_RS17105;Dbxref=GenBank:WP_001186424.1;Name=WP_001186424.1;gbkey=CDS;gene=hyaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309157.1;locus_tag=AC56_RS17105;product=Ni/Fe-hydrogenase b-type cytochrome subunit;protein_id=WP_001186424.1;transl_table=11
NZ_JJLS01000140.1	RefSeq	gene	34105	34692	.	+	.	ID=gene-AC56_RS17100;Name=hyaD;gbkey=Gene;gene=hyaD;gene_biotype=protein_coding;locus_tag=AC56_RS17100;old_locus_tag=AC56_1031
NZ_JJLS01000140.1	Protein Homology	CDS	34105	34692	.	+	0	ID=cds-WP_000003671.1;Parent=gene-AC56_RS17100;Dbxref=GenBank:WP_000003671.1;Name=WP_000003671.1;gbkey=CDS;gene=hyaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415494.1;locus_tag=AC56_RS17100;product=hydrogenase 1 maturation protease;protein_id=WP_000003671.1;transl_table=11
NZ_JJLS01000140.1	RefSeq	gene	34689	35087	.	+	.	ID=gene-AC56_RS17095;Name=hyaE;gbkey=Gene;gene=hyaE;gene_biotype=protein_coding;locus_tag=AC56_RS17095;old_locus_tag=AC56_1032
NZ_JJLS01000140.1	Protein Homology	CDS	34689	35087	.	+	0	ID=cds-WP_000063978.1;Parent=gene-AC56_RS17095;Dbxref=GenBank:WP_000063978.1;Name=WP_000063978.1;gbkey=CDS;gene=hyaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415495.1;locus_tag=AC56_RS17095;product=hydrogenase-1 operon protein HyaE;protein_id=WP_000063978.1;transl_table=11
NZ_JJLS01000140.1	RefSeq	gene	35084	35941	.	+	.	ID=gene-AC56_RS17090;Name=hyaF;gbkey=Gene;gene=hyaF;gene_biotype=protein_coding;locus_tag=AC56_RS17090;old_locus_tag=AC56_1033
NZ_JJLS01000140.1	Protein Homology	CDS	35084	35941	.	+	0	ID=cds-WP_000004899.1;Parent=gene-AC56_RS17090;Dbxref=GenBank:WP_000004899.1;Name=WP_000004899.1;gbkey=CDS;gene=hyaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415496.1;locus_tag=AC56_RS17090;product=hydrogenase expression/formation protein;protein_id=WP_000004899.1;transl_table=11
NZ_JJLS01000140.1	RefSeq	gene	36075	37619	.	+	.	ID=gene-AC56_RS17085;Name=appC;gbkey=Gene;gene=appC;gene_biotype=protein_coding;locus_tag=AC56_RS17085;old_locus_tag=AC56_1034
NZ_JJLS01000140.1	Protein Homology	CDS	36075	37619	.	+	0	ID=cds-WP_032278065.1;Parent=gene-AC56_RS17085;Dbxref=GenBank:WP_032278065.1;Name=WP_032278065.1;gbkey=CDS;gene=appC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415497.1;locus_tag=AC56_RS17085;product=cytochrome bd-II oxidase subunit 1;protein_id=WP_032278065.1;transl_table=11
NZ_JJLS01000140.1	RefSeq	gene	37631	38767	.	+	.	ID=gene-AC56_RS17080;Name=appB;gbkey=Gene;gene=appB;gene_biotype=protein_coding;locus_tag=AC56_RS17080;old_locus_tag=AC56_1035
NZ_JJLS01000140.1	Protein Homology	CDS	37631	38767	.	+	0	ID=cds-WP_032278066.1;Parent=gene-AC56_RS17080;Dbxref=GenBank:WP_032278066.1;Name=WP_032278066.1;gbkey=CDS;gene=appB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415498.1;locus_tag=AC56_RS17080;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_032278066.1;transl_table=11
NZ_JJLS01000140.1	RefSeq	gene	38780	38872	.	+	.	ID=gene-AC56_RS0125460;Name=cbdX;gbkey=Gene;gene=cbdX;gene_biotype=protein_coding;locus_tag=AC56_RS0125460
NZ_JJLS01000140.1	Protein Homology	CDS	38780	38872	.	+	0	ID=cds-WP_000270305.1;Parent=gene-AC56_RS0125460;Dbxref=GenBank:WP_000270305.1;Name=WP_000270305.1;gbkey=CDS;gene=cbdX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165313.1;locus_tag=AC56_RS0125460;product=cytochrome bd-II oxidase subunit CbdX;protein_id=WP_000270305.1;transl_table=11
NZ_JJLS01000140.1	RefSeq	gene	38952	40250	.	+	.	ID=gene-AC56_RS17075;Name=appA;gbkey=Gene;gene=appA;gene_biotype=protein_coding;locus_tag=AC56_RS17075;old_locus_tag=AC56_1036
NZ_JJLS01000140.1	Protein Homology	CDS	38952	40250	.	+	0	ID=cds-WP_001300464.1;Parent=gene-AC56_RS17075;Dbxref=GenBank:WP_001300464.1;Name=WP_001300464.1;gbkey=CDS;gene=appA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415500.1;locus_tag=AC56_RS17075;product=bifunctional acid phosphatase/4-phytase;protein_id=WP_001300464.1;transl_table=11
NZ_JJLS01000140.1	RefSeq	gene	40365	42545	.	-	.	ID=gene-AC56_RS17070;Name=etk;gbkey=Gene;gene=etk;gene_biotype=protein_coding;locus_tag=AC56_RS17070;old_locus_tag=AC56_1037
NZ_JJLS01000140.1	Protein Homology	CDS	40365	42545	.	-	0	ID=cds-WP_000208668.1;Parent=gene-AC56_RS17070;Dbxref=GenBank:WP_000208668.1;Name=WP_000208668.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=etk;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309164.1;locus_tag=AC56_RS17070;product=tyrosine-protein kinase;protein_id=WP_000208668.1;transl_table=11
NZ_JJLS01000140.1	RefSeq	gene	42565	43011	.	-	.	ID=gene-AC56_RS17065;Name=etp;gbkey=Gene;gene=etp;gene_biotype=protein_coding;gene_synonym=yccY;locus_tag=AC56_RS17065;old_locus_tag=AC56_1038
NZ_JJLS01000140.1	Protein Homology	CDS	42565	43011	.	-	0	ID=cds-WP_000057871.1;Parent=gene-AC56_RS17065;Dbxref=GenBank:WP_000057871.1;Name=WP_000057871.1;gbkey=CDS;gene=etp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309165.2;locus_tag=AC56_RS17065;product=protein-tyrosine-phosphatase Etp;protein_id=WP_000057871.1;transl_table=11
NZ_JJLS01000140.1	RefSeq	gene	42999	44138	.	-	.	ID=gene-AC56_RS17060;Name=gfcE;gbkey=Gene;gene=gfcE;gene_biotype=protein_coding;locus_tag=AC56_RS17060;old_locus_tag=AC56_1039
NZ_JJLS01000140.1	Protein Homology	CDS	42999	44138	.	-	0	ID=cds-WP_032278067.1;Parent=gene-AC56_RS17060;Dbxref=GenBank:WP_032278067.1;Name=WP_032278067.1;Ontology_term=GO:0015774,GO:0016020;gbkey=CDS;gene=gfcE;go_component=membrane|0016020||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309166.1;locus_tag=AC56_RS17060;product=polysaccharide export protein;protein_id=WP_032278067.1;transl_table=11
NZ_JJLS01000140.1	RefSeq	gene	44184	46280	.	-	.	ID=gene-AC56_RS17055;Name=gfcD;gbkey=Gene;gene=gfcD;gene_biotype=protein_coding;locus_tag=AC56_RS17055;old_locus_tag=AC56_1040
NZ_JJLS01000140.1	Protein Homology	CDS	44184	46280	.	-	0	ID=cds-WP_001543612.1;Parent=gene-AC56_RS17055;Dbxref=GenBank:WP_001543612.1;Name=WP_001543612.1;gbkey=CDS;gene=gfcD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309167.1;locus_tag=AC56_RS17055;product=YjbH domain-containing protein;protein_id=WP_001543612.1;transl_table=11
NZ_JJLS01000140.1	RefSeq	gene	46280	46987	.	-	.	ID=gene-AC56_RS17050;Name=gfcC;gbkey=Gene;gene=gfcC;gene_biotype=protein_coding;locus_tag=AC56_RS17050;old_locus_tag=AC56_1041
NZ_JJLS01000140.1	Protein Homology	CDS	46280	46987	.	-	0	ID=cds-WP_050439676.1;Parent=gene-AC56_RS17050;Dbxref=GenBank:WP_050439676.1;Name=WP_050439676.1;gbkey=CDS;gene=gfcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415505.1;locus_tag=AC56_RS17050;product=capsule biosynthesis GfcC family protein;protein_id=WP_050439676.1;transl_table=11
NZ_JJLS01000140.1	RefSeq	pseudogene	47031	47432	.	-	.	ID=gene-AC56_RS17045;Name=AC56_RS17045;end_range=47432,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS17045;old_locus_tag=AC56_1042;partial=true;pseudo=true
NZ_JJLS01000140.1	Protein Homology	CDS	47031	47432	.	-	0	ID=cds-AC56_RS17045;Parent=gene-AC56_RS17045;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=47432,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS17045;partial=true;product=IS5-like element IS903B family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000141.1 1 39316
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000141.1	RefSeq	region	1	39316	.	+	.	ID=NZ_JJLS01000141.1:1..39316;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000141.1	RefSeq	gene	1	498	.	-	.	ID=gene-AC56_RS17040;Name=AC56_RS17040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS17040;old_locus_tag=AC56_1043;partial=true;start_range=.,1
NZ_JJLS01000141.1	Protein Homology	CDS	1	498	.	-	0	ID=cds-WP_113706238.1;Parent=gene-AC56_RS17040;Dbxref=GenBank:WP_113706238.1;Name=WP_113706238.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS17040;partial=true;product=IS5 family transposase;protein_id=WP_113706238.1;start_range=.,1;transl_table=11
NZ_JJLS01000141.1	RefSeq	pseudogene	531	950	.	-	.	ID=gene-AC56_RS17035;Name=gfcB;gbkey=Gene;gene=gfcB;gene_biotype=pseudogene;locus_tag=AC56_RS17035;old_locus_tag=AC56_1044;partial=true;pseudo=true;start_range=.,531
NZ_JJLS01000141.1	Protein Homology	CDS	531	950	.	-	0	ID=cds-AC56_RS17035;Parent=gene-AC56_RS17035;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=gfcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309169.1;locus_tag=AC56_RS17035;partial=true;product=lipoprotein GfcB;pseudo=true;start_range=.,531;transl_table=11
NZ_JJLS01000141.1	RefSeq	gene	1057	1362	.	-	.	ID=gene-AC56_RS17030;Name=AC56_RS17030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS17030;old_locus_tag=AC56_1045
NZ_JJLS01000141.1	Protein Homology	CDS	1057	1362	.	-	0	ID=cds-WP_000681082.1;Parent=gene-AC56_RS17030;Dbxref=GenBank:WP_000681082.1;Name=WP_000681082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000681082.1;locus_tag=AC56_RS17030;product=hypothetical protein;protein_id=WP_000681082.1;transl_table=11
NZ_JJLS01000141.1	RefSeq	gene	1803	2015	.	-	.	ID=gene-AC56_RS17025;Name=cspH;gbkey=Gene;gene=cspH;gene_biotype=protein_coding;locus_tag=AC56_RS17025;old_locus_tag=AC56_1046
NZ_JJLS01000141.1	Protein Homology	CDS	1803	2015	.	-	0	ID=cds-WP_000087763.1;Parent=gene-AC56_RS17025;Dbxref=GenBank:WP_000087763.1;Name=WP_000087763.1;gbkey=CDS;gene=cspH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415509.1;locus_tag=AC56_RS17025;product=cold shock-like protein CspH;protein_id=WP_000087763.1;transl_table=11
NZ_JJLS01000141.1	RefSeq	gene	2301	2513	.	+	.	ID=gene-AC56_RS17020;Name=cspG;gbkey=Gene;gene=cspG;gene_biotype=protein_coding;locus_tag=AC56_RS17020;old_locus_tag=AC56_1047
NZ_JJLS01000141.1	Protein Homology	CDS	2301	2513	.	+	0	ID=cds-WP_000066490.1;Parent=gene-AC56_RS17020;Dbxref=GenBank:WP_000066490.1;Name=WP_000066490.1;gbkey=CDS;gene=cspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309172.1;locus_tag=AC56_RS17020;product=cold shock protein CspG;protein_id=WP_000066490.1;transl_table=11
NZ_JJLS01000141.1	RefSeq	gene	2524	2712	.	+	.	ID=gene-AC56_RS29030;Name=ymcF;gbkey=Gene;gene=ymcF;gene_biotype=protein_coding;locus_tag=AC56_RS29030
NZ_JJLS01000141.1	Protein Homology	CDS	2524	2712	.	+	0	ID=cds-WP_071524879.1;Parent=gene-AC56_RS29030;Dbxref=GenBank:WP_071524879.1;Name=WP_071524879.1;gbkey=CDS;gene=ymcF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518761.1;locus_tag=AC56_RS29030;product=cold-shock protein;protein_id=WP_071524879.1;transl_table=11
NZ_JJLS01000141.1	RefSeq	gene	2687	2917	.	+	.	ID=gene-AC56_RS0125465;Name=ymcE;gbkey=Gene;gene=ymcE;gene_biotype=protein_coding;locus_tag=AC56_RS0125465
NZ_JJLS01000141.1	Protein Homology	CDS	2687	2917	.	+	0	ID=cds-WP_001309400.1;Parent=gene-AC56_RS0125465;Dbxref=GenBank:WP_001309400.1;Name=WP_001309400.1;gbkey=CDS;gene=ymcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415511.1;locus_tag=AC56_RS0125465;product=protein YmcE;protein_id=WP_001309400.1;transl_table=11
NZ_JJLS01000141.1	RefSeq	gene	2907	3080	.	+	.	ID=gene-AC56_RS17015;Name=gnsA;gbkey=Gene;gene=gnsA;gene_biotype=protein_coding;locus_tag=AC56_RS17015;old_locus_tag=AC56_1049
NZ_JJLS01000141.1	Protein Homology	CDS	2907	3080	.	+	0	ID=cds-WP_001019196.1;Parent=gene-AC56_RS17015;Dbxref=GenBank:WP_001019196.1;Name=WP_001019196.1;gbkey=CDS;gene=gnsA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588446.1;locus_tag=AC56_RS17015;product=GnsA/GnsB family addiction module toxin;protein_id=WP_001019196.1;transl_table=11
NZ_JJLS01000141.1	RefSeq	gene	3129	4202	.	-	.	ID=gene-AC56_RS17010;Name=yccM;gbkey=Gene;gene=yccM;gene_biotype=protein_coding;locus_tag=AC56_RS17010;old_locus_tag=AC56_1050
NZ_JJLS01000141.1	Protein Homology	CDS	3129	4202	.	-	0	ID=cds-WP_032278071.1;Parent=gene-AC56_RS17010;Dbxref=GenBank:WP_032278071.1;Name=WP_032278071.1;Ontology_term=GO:0051539;gbkey=CDS;gene=yccM;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415512.1;locus_tag=AC56_RS17010;product=4Fe-4S binding protein;protein_id=WP_032278071.1;transl_table=11
NZ_JJLS01000141.1	RefSeq	gene	4274	7018	.	-	.	ID=gene-AC56_RS17005;Name=torS;gbkey=Gene;gene=torS;gene_biotype=protein_coding;locus_tag=AC56_RS17005;old_locus_tag=AC56_1051
NZ_JJLS01000141.1	Protein Homology	CDS	4274	7018	.	-	0	ID=cds-WP_071998935.1;Parent=gene-AC56_RS17005;Dbxref=GenBank:WP_071998935.1;Name=WP_071998935.1;gbkey=CDS;gene=torS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415513.2;locus_tag=AC56_RS17005;product=TMAO reductase system sensor histidine kinase/response regulator TorS;protein_id=WP_071998935.1;transl_table=11
NZ_JJLS01000141.1	RefSeq	gene	7101	8129	.	+	.	ID=gene-AC56_RS17000;Name=torT;gbkey=Gene;gene=torT;gene_biotype=protein_coding;locus_tag=AC56_RS17000;old_locus_tag=AC56_1052
NZ_JJLS01000141.1	Protein Homology	CDS	7101	8129	.	+	0	ID=cds-WP_016242035.1;Parent=gene-AC56_RS17000;Dbxref=GenBank:WP_016242035.1;Name=WP_016242035.1;gbkey=CDS;gene=torT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415514.1;locus_tag=AC56_RS17000;product=TMAO reductase system periplasmic protein TorT;protein_id=WP_016242035.1;transl_table=11
NZ_JJLS01000141.1	RefSeq	gene	8102	8794	.	-	.	ID=gene-AC56_RS16995;Name=torR;gbkey=Gene;gene=torR;gene_biotype=protein_coding;locus_tag=AC56_RS16995;old_locus_tag=AC56_1053
NZ_JJLS01000141.1	Protein Homology	CDS	8102	8794	.	-	0	ID=cds-WP_001120112.1;Parent=gene-AC56_RS16995;Dbxref=GenBank:WP_001120112.1;Name=WP_001120112.1;gbkey=CDS;gene=torR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309177.1;locus_tag=AC56_RS16995;product=two-component system response regulator TorR;protein_id=WP_001120112.1;transl_table=11
NZ_JJLS01000141.1	RefSeq	gene	8924	10096	.	+	.	ID=gene-AC56_RS16990;Name=torC;gbkey=Gene;gene=torC;gene_biotype=protein_coding;locus_tag=AC56_RS16990;old_locus_tag=AC56_1054
NZ_JJLS01000141.1	Protein Homology	CDS	8924	10096	.	+	0	ID=cds-WP_032278073.1;Parent=gene-AC56_RS16990;Dbxref=GenBank:WP_032278073.1;Name=WP_032278073.1;Ontology_term=GO:0009055,GO:0020037,GO:0016020;gbkey=CDS;gene=torC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415516.1;locus_tag=AC56_RS16990;product=pentaheme c-type cytochrome TorC;protein_id=WP_032278073.1;transl_table=11
NZ_JJLS01000141.1	RefSeq	gene	10096	12642	.	+	.	ID=gene-AC56_RS16985;Name=torA;gbkey=Gene;gene=torA;gene_biotype=protein_coding;locus_tag=AC56_RS16985;old_locus_tag=AC56_1055
NZ_JJLS01000141.1	Protein Homology	CDS	10096	12642	.	+	0	ID=cds-WP_032278074.1;Parent=gene-AC56_RS16985;Dbxref=GenBank:WP_032278074.1;Name=WP_032278074.1;Ontology_term=GO:0030151,GO:0043546,GO:0050626,GO:0042597;gbkey=CDS;gene=torA;go_component=periplasmic space|0042597||IEA;go_function=molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,trimethylamine-N-oxide reductase (cytochrome c) activity|0050626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415517.1;locus_tag=AC56_RS16985;product=trimethylamine-N-oxide reductase TorA;protein_id=WP_032278074.1;transl_table=11
NZ_JJLS01000141.1	RefSeq	gene	12639	13238	.	+	.	ID=gene-AC56_RS16980;Name=torD;gbkey=Gene;gene=torD;gene_biotype=protein_coding;locus_tag=AC56_RS16980;old_locus_tag=AC56_1056
NZ_JJLS01000141.1	Protein Homology	CDS	12639	13238	.	+	0	ID=cds-WP_001408950.1;Parent=gene-AC56_RS16980;Dbxref=GenBank:WP_001408950.1;Name=WP_001408950.1;Ontology_term=GO:0051259;gbkey=CDS;gene=torD;go_process=protein complex oligomerization|0051259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415518.1;locus_tag=AC56_RS16980;product=molecular chaperone TorD;protein_id=WP_001408950.1;transl_table=11
NZ_JJLS01000141.1	RefSeq	gene	13331	13636	.	-	.	ID=gene-AC56_RS16975;Name=cbpM;gbkey=Gene;gene=cbpM;gene_biotype=protein_coding;locus_tag=AC56_RS16975;old_locus_tag=AC56_1057
NZ_JJLS01000141.1	Protein Homology	CDS	13331	13636	.	-	0	ID=cds-WP_000024560.1;Parent=gene-AC56_RS16975;Dbxref=GenBank:WP_000024560.1;Name=WP_000024560.1;gbkey=CDS;gene=cbpM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309181.1;locus_tag=AC56_RS16975;product=chaperone modulator CbpM;protein_id=WP_000024560.1;transl_table=11
NZ_JJLS01000141.1	RefSeq	gene	13636	14556	.	-	.	ID=gene-AC56_RS16970;Name=cbpA;gbkey=Gene;gene=cbpA;gene_biotype=protein_coding;locus_tag=AC56_RS16970;old_locus_tag=AC56_1058
NZ_JJLS01000141.1	Protein Homology	CDS	13636	14556	.	-	0	ID=cds-WP_000420621.1;Parent=gene-AC56_RS16970;Dbxref=GenBank:WP_000420621.1;Name=WP_000420621.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=cbpA;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415520.1;locus_tag=AC56_RS16970;product=curved DNA-binding protein;protein_id=WP_000420621.1;transl_table=11
NZ_JJLS01000141.1	RefSeq	gene	14817	16067	.	+	.	ID=gene-AC56_RS16965;Name=AC56_RS16965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS16965;old_locus_tag=AC56_1059
NZ_JJLS01000141.1	Protein Homology	CDS	14817	16067	.	+	0	ID=cds-WP_032278075.1;Parent=gene-AC56_RS16965;Dbxref=GenBank:WP_032278075.1;Name=WP_032278075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415521.1;locus_tag=AC56_RS16965;product=YccE family protein;protein_id=WP_032278075.1;transl_table=11
NZ_JJLS01000141.1	RefSeq	gene	16349	17590	.	+	.	ID=gene-AC56_RS16960;Name=agp;gbkey=Gene;gene=agp;gene_biotype=protein_coding;locus_tag=AC56_RS16960;old_locus_tag=AC56_1060
NZ_JJLS01000141.1	Protein Homology	CDS	16349	17590	.	+	0	ID=cds-WP_032278076.1;Parent=gene-AC56_RS16960;Dbxref=GenBank:WP_032278076.1;Name=WP_032278076.1;gbkey=CDS;gene=agp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415522.1;locus_tag=AC56_RS16960;product=bifunctional glucose-1-phosphatase/inositol phosphatase;protein_id=WP_032278076.1;transl_table=11
NZ_JJLS01000141.1	RefSeq	gene	17810	18037	.	-	.	ID=gene-AC56_RS16955;Name=yccJ;gbkey=Gene;gene=yccJ;gene_biotype=protein_coding;locus_tag=AC56_RS16955;old_locus_tag=AC56_1061
NZ_JJLS01000141.1	Protein Homology	CDS	17810	18037	.	-	0	ID=cds-WP_001143120.1;Parent=gene-AC56_RS16955;Dbxref=GenBank:WP_001143120.1;Name=WP_001143120.1;gbkey=CDS;gene=yccJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898701.1;locus_tag=AC56_RS16955;product=YccJ family protein;protein_id=WP_001143120.1;transl_table=11
NZ_JJLS01000141.1	RefSeq	gene	18058	18654	.	-	.	ID=gene-AC56_RS16950;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=AC56_RS16950;old_locus_tag=AC56_1062
NZ_JJLS01000141.1	Protein Homology	CDS	18058	18654	.	-	0	ID=cds-WP_001151437.1;Parent=gene-AC56_RS16950;Dbxref=GenBank:WP_001151437.1;Name=WP_001151437.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415524.1;locus_tag=AC56_RS16950;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_001151437.1;transl_table=11
NZ_JJLS01000141.1	RefSeq	gene	19027	19200	.	+	.	ID=gene-AC56_RS0125475;Name=ymdF;gbkey=Gene;gene=ymdF;gene_biotype=protein_coding;locus_tag=AC56_RS0125475
NZ_JJLS01000141.1	Protein Homology	CDS	19027	19200	.	+	0	ID=cds-WP_001273658.1;Parent=gene-AC56_RS0125475;Dbxref=GenBank:WP_001273658.1;Name=WP_001273658.1;Ontology_term=GO:0006950;gbkey=CDS;gene=ymdF;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415525.2;locus_tag=AC56_RS0125475;product=general stress protein;protein_id=WP_001273658.1;transl_table=11
NZ_JJLS01000141.1	RefSeq	gene	19458	20786	.	-	.	ID=gene-AC56_RS16945;Name=rutG;gbkey=Gene;gene=rutG;gene_biotype=protein_coding;locus_tag=AC56_RS16945;old_locus_tag=AC56_1064
NZ_JJLS01000141.1	Protein Homology	CDS	19458	20786	.	-	0	ID=cds-WP_032278079.1;Parent=gene-AC56_RS16945;Dbxref=GenBank:WP_032278079.1;Name=WP_032278079.1;Ontology_term=GO:0006864,GO:0015218,GO:0016020;gbkey=CDS;gene=rutG;go_component=membrane|0016020||IEA;go_function=pyrimidine nucleotide transmembrane transporter activity|0015218||IEA;go_process=pyrimidine nucleotide transport|0006864||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415526.4;locus_tag=AC56_RS16945;product=pyrimidine utilization transport protein G;protein_id=WP_032278079.1;transl_table=11
NZ_JJLS01000141.1	RefSeq	gene	20807	21301	.	-	.	ID=gene-AC56_RS16940;Name=rutF;gbkey=Gene;gene=rutF;gene_biotype=protein_coding;locus_tag=AC56_RS16940;old_locus_tag=AC56_1065
NZ_JJLS01000141.1	Protein Homology	CDS	20807	21301	.	-	0	ID=cds-WP_001028095.1;Parent=gene-AC56_RS16940;Dbxref=GenBank:WP_001028095.1;Name=WP_001028095.1;Ontology_term=GO:0008752;gbkey=CDS;gene=rutF;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309280.2;locus_tag=AC56_RS16940;product=NADH-dependent FMN reductase RutF;protein_id=WP_001028095.1;transl_table=11
NZ_JJLS01000141.1	RefSeq	gene	21312	21902	.	-	.	ID=gene-AC56_RS16935;Name=rutE;gbkey=Gene;gene=rutE;gene_biotype=protein_coding;locus_tag=AC56_RS16935;old_locus_tag=AC56_1066
NZ_JJLS01000141.1	Protein Homology	CDS	21312	21902	.	-	0	ID=cds-WP_032278080.1;Parent=gene-AC56_RS16935;Dbxref=GenBank:WP_032278080.1;Name=WP_032278080.1;Ontology_term=GO:0016491;gbkey=CDS;gene=rutE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309281.1;locus_tag=AC56_RS16935;product=malonic semialdehyde reductase;protein_id=WP_032278080.1;transl_table=11
NZ_JJLS01000141.1	RefSeq	gene	21912	22712	.	-	.	ID=gene-AC56_RS16930;Name=rutD;gbkey=Gene;gene=rutD;gene_biotype=protein_coding;locus_tag=AC56_RS16930;old_locus_tag=AC56_1067
NZ_JJLS01000141.1	Protein Homology	CDS	21912	22712	.	-	0	ID=cds-WP_001619304.1;Parent=gene-AC56_RS16930;Dbxref=GenBank:WP_001619304.1;Name=WP_001619304.1;Ontology_term=GO:0006212,GO:0016811;gbkey=CDS;gene=rutD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309282.1;locus_tag=AC56_RS16930;product=pyrimidine utilization protein D;protein_id=WP_001619304.1;transl_table=11
NZ_JJLS01000141.1	RefSeq	gene	22720	23106	.	-	.	ID=gene-AC56_RS16925;Name=rutC;gbkey=Gene;gene=rutC;gene_biotype=protein_coding;locus_tag=AC56_RS16925;old_locus_tag=AC56_1068
NZ_JJLS01000141.1	Protein Homology	CDS	22720	23106	.	-	0	ID=cds-WP_032278081.1;Parent=gene-AC56_RS16925;Dbxref=GenBank:WP_032278081.1;Name=WP_032278081.1;gbkey=CDS;gene=rutC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415530.1;locus_tag=AC56_RS16925;product=3-aminoacrylate deaminase;protein_id=WP_032278081.1;transl_table=11
NZ_JJLS01000141.1	RefSeq	gene	23118	23810	.	-	.	ID=gene-AC56_RS16920;Name=rutB;gbkey=Gene;gene=rutB;gene_biotype=protein_coding;locus_tag=AC56_RS16920;old_locus_tag=AC56_1069
NZ_JJLS01000141.1	Protein Homology	CDS	23118	23810	.	-	0	ID=cds-WP_001307708.1;Parent=gene-AC56_RS16920;Dbxref=GenBank:WP_001307708.1;Name=WP_001307708.1;gbkey=CDS;gene=rutB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415531.2;locus_tag=AC56_RS16920;product=peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB;protein_id=WP_001307708.1;transl_table=11
NZ_JJLS01000141.1	RefSeq	gene	23810	24901	.	-	.	ID=gene-AC56_RS16915;Name=rutA;gbkey=Gene;gene=rutA;gene_biotype=protein_coding;locus_tag=AC56_RS16915;old_locus_tag=AC56_1070
NZ_JJLS01000141.1	Protein Homology	CDS	23810	24901	.	-	0	ID=cds-WP_001352489.1;Parent=gene-AC56_RS16915;Dbxref=GenBank:WP_001352489.1;Name=WP_001352489.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;gene=rutA;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309285.4;locus_tag=AC56_RS16915;product=pyrimidine utilization protein A;protein_id=WP_001352489.1;transl_table=11
NZ_JJLS01000141.1	RefSeq	gene	25189	25827	.	+	.	ID=gene-AC56_RS16910;Name=rutR;gbkey=Gene;gene=rutR;gene_biotype=protein_coding;locus_tag=AC56_RS16910;old_locus_tag=AC56_1071
NZ_JJLS01000141.1	Protein Homology	CDS	25189	25827	.	+	0	ID=cds-WP_001301219.1;Parent=gene-AC56_RS16910;Dbxref=GenBank:WP_001301219.1;Name=WP_001301219.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;gene=rutR;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415533.1;locus_tag=AC56_RS16910;product=HTH-type transcriptional regulator RutR;protein_id=WP_001301219.1;transl_table=11
NZ_JJLS01000141.1	RefSeq	gene	25867	29829	.	-	.	ID=gene-AC56_RS16905;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=AC56_RS16905;old_locus_tag=AC56_1072
NZ_JJLS01000141.1	Protein Homology	CDS	25867	29829	.	-	0	ID=cds-WP_032282613.1;Parent=gene-AC56_RS16905;Dbxref=GenBank:WP_032282613.1;Name=WP_032282613.1;Ontology_term=GO:0006355,GO:0006561,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,1-pyrroline-5-carboxylate dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309287.1;locus_tag=AC56_RS16905;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_032282613.1;transl_table=11
NZ_JJLS01000141.1	RefSeq	gene	29884	30093	.	+	.	ID=gene-AC56_RS0125480;Name=AC56_RS0125480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0125480;old_locus_tag=AC56_1073
NZ_JJLS01000141.1	GeneMarkS-2+	CDS	29884	30093	.	+	0	ID=cds-WP_000979516.1;Parent=gene-AC56_RS0125480;Dbxref=GenBank:WP_000979516.1;Name=WP_000979516.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS0125480;product=hypothetical protein;protein_id=WP_000979516.1;transl_table=11
NZ_JJLS01000141.1	RefSeq	gene	30252	31760	.	+	.	ID=gene-AC56_RS16900;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=AC56_RS16900;old_locus_tag=AC56_1075
NZ_JJLS01000141.1	Protein Homology	CDS	30252	31760	.	+	0	ID=cds-WP_001018489.1;Parent=gene-AC56_RS16900;Dbxref=GenBank:WP_001018489.1;Name=WP_001018489.1;Ontology_term=GO:0006814,GO:0015824,GO:0055085,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415535.1;locus_tag=AC56_RS16900;product=sodium/proline symporter PutP;protein_id=WP_001018489.1;transl_table=11
NZ_JJLS01000141.1	RefSeq	gene	32302	33132	.	+	.	ID=gene-AC56_RS16895;Name=efeU;gbkey=Gene;gene=efeU;gene_biotype=protein_coding;locus_tag=AC56_RS16895;old_locus_tag=AC56_1076
NZ_JJLS01000141.1	Protein Homology	CDS	32302	33132	.	+	0	ID=cds-WP_000497942.1;Parent=gene-AC56_RS16895;Dbxref=GenBank:WP_000497942.1;Name=WP_000497942.1;Ontology_term=GO:0034755,GO:0005381,GO:0033573;gbkey=CDS;gene=efeU;go_component=high-affinity iron permease complex|0033573||IEA;go_function=iron ion transmembrane transporter activity|0005381||IEA;go_process=iron ion transmembrane transport|0034755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309290.1;locus_tag=AC56_RS16895;product=iron uptake transporter permease EfeU;protein_id=WP_000497942.1;transl_table=11
NZ_JJLS01000141.1	RefSeq	gene	33190	34317	.	+	.	ID=gene-AC56_RS16890;Name=efeO;gbkey=Gene;gene=efeO;gene_biotype=protein_coding;locus_tag=AC56_RS16890;old_locus_tag=AC56_1077
NZ_JJLS01000141.1	Protein Homology	CDS	33190	34317	.	+	0	ID=cds-WP_032278084.1;Parent=gene-AC56_RS16890;Dbxref=GenBank:WP_032278084.1;Name=WP_032278084.1;gbkey=CDS;gene=efeO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415537.1;locus_tag=AC56_RS16890;product=iron uptake system protein EfeO;protein_id=WP_032278084.1;transl_table=11
NZ_JJLS01000141.1	RefSeq	gene	34323	35594	.	+	.	ID=gene-AC56_RS16885;Name=efeB;gbkey=Gene;gene=efeB;gene_biotype=protein_coding;locus_tag=AC56_RS16885;old_locus_tag=AC56_1078
NZ_JJLS01000141.1	Protein Homology	CDS	34323	35594	.	+	0	ID=cds-WP_032278085.1;Parent=gene-AC56_RS16885;Dbxref=GenBank:WP_032278085.1;Name=WP_032278085.1;Ontology_term=GO:0033212,GO:0004601,GO:0020037;gbkey=CDS;gene=efeB;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=iron import into cell|0033212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415538.1;locus_tag=AC56_RS16885;product=iron uptake transporter deferrochelatase/peroxidase subunit;protein_id=WP_032278085.1;transl_table=11
NZ_JJLS01000141.1	RefSeq	gene	36215	37003	.	+	.	ID=gene-AC56_RS16880;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=AC56_RS16880;old_locus_tag=AC56_1079
NZ_JJLS01000141.1	Protein Homology	CDS	36215	37003	.	+	0	ID=cds-WP_000533522.1;Parent=gene-AC56_RS16880;Dbxref=GenBank:WP_000533522.1;Name=WP_000533522.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741490.1;locus_tag=AC56_RS16880;product=phosphate starvation-inducible protein PhoH;protein_id=WP_000533522.1;transl_table=11
NZ_JJLS01000141.1	RefSeq	gene	37053	37466	.	-	.	ID=gene-AC56_RS16875;Name=pgaD;gbkey=Gene;gene=pgaD;gene_biotype=protein_coding;locus_tag=AC56_RS16875;old_locus_tag=AC56_1080
NZ_JJLS01000141.1	Protein Homology	CDS	37053	37466	.	-	0	ID=cds-WP_001061095.1;Parent=gene-AC56_RS16875;Dbxref=GenBank:WP_001061095.1;Name=WP_001061095.1;gbkey=CDS;gene=pgaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309294.1;locus_tag=AC56_RS16875;product=poly-beta-1%2C6-N-acetyl-D-glucosamine biosynthesis protein PgaD;protein_id=WP_001061095.1;transl_table=11
NZ_JJLS01000141.1	RefSeq	gene	37468	38793	.	-	.	ID=gene-AC56_RS16870;Name=pgaC;gbkey=Gene;gene=pgaC;gene_biotype=protein_coding;locus_tag=AC56_RS16870;old_locus_tag=AC56_1081
NZ_JJLS01000141.1	Protein Homology	CDS	37468	38793	.	-	0	ID=cds-WP_000610451.1;Parent=gene-AC56_RS16870;Dbxref=GenBank:WP_000610451.1;Name=WP_000610451.1;Ontology_term=GO:0042710,GO:0008375;gbkey=CDS;gene=pgaC;go_function=acetylglucosaminyltransferase activity|0008375||IEA;go_process=biofilm formation|0042710||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415541.1;locus_tag=AC56_RS16870;product=poly-beta-1%2C6-N-acetyl-D-glucosamine synthase;protein_id=WP_000610451.1;transl_table=11
NZ_JJLS01000141.1	RefSeq	pseudogene	38786	38920	.	-	.	ID=gene-AC56_RS33240;Name=AC56_RS33240;end_range=38920,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33240;old_locus_tag=AC56_1082;partial=true;pseudo=true
NZ_JJLS01000141.1	Protein Homology	CDS	38786	38920	.	-	0	ID=cds-AC56_RS33240;Parent=gene-AC56_RS33240;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=38920,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309296.1;locus_tag=AC56_RS33240;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_JJLS01000141.1	RefSeq	pseudogene	38972	39316	.	+	.	ID=gene-AC56_RS0125495;Name=AC56_RS0125495;end_range=39316,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0125495;partial=true;pseudo=true
NZ_JJLS01000141.1	Protein Homology	CDS	38972	39316	.	+	0	ID=cds-AC56_RS0125495;Parent=gene-AC56_RS0125495;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=39316,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS0125495;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000142.1 1 1724
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000142.1	RefSeq	region	1	1724	.	+	.	ID=NZ_JJLS01000142.1:1..1724;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000142.1	RefSeq	pseudogene	1	316	.	-	.	ID=gene-AC56_RS0125500;Name=AC56_RS0125500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0125500;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000142.1	Protein Homology	CDS	1	316	.	-	0	ID=cds-AC56_RS0125500;Parent=gene-AC56_RS0125500;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS0125500;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000142.1	RefSeq	gene	458	1724	.	+	.	ID=gene-AC56_RS16865;Name=gndA;end_range=1724,.;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=AC56_RS16865;old_locus_tag=AC56_1085;partial=true
NZ_JJLS01000142.1	Protein Homology	CDS	458	1724	.	+	0	ID=cds-WP_032282614.1;Parent=gene-AC56_RS16865;Dbxref=GenBank:WP_032282614.1;Name=WP_032282614.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;end_range=1724,.;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310857.1;locus_tag=AC56_RS16865;partial=true;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_032282614.1;transl_table=11
##sequence-region NZ_JJLS01000143.1 1 1466
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000143.1	RefSeq	region	1	1466	.	+	.	ID=NZ_JJLS01000143.1:1..1466;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000143.1	RefSeq	pseudogene	31	1091	.	-	.	ID=gene-AC56_RS16860;Name=AC56_RS16860;end_range=1091,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS16860;old_locus_tag=AC56_1086;partial=true;pseudo=true
NZ_JJLS01000143.1	Protein Homology	CDS	31	1091	.	-	0	ID=cds-AC56_RS16860;Parent=gene-AC56_RS16860;Note=programmed frameshift%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=1091,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AC56_RS16860;partial=true;product=IS3-like element IS3 family transposase;pseudo=true;transl_table=11
NZ_JJLS01000143.1	RefSeq	gene	1150	1466	.	-	.	ID=gene-AC56_RS16855;Name=AC56_RS16855;end_range=1466,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS16855;old_locus_tag=AC56_1087;partial=true
NZ_JJLS01000143.1	Protein Homology	CDS	1150	1466	.	-	2	ID=cds-WP_032175328.1;Parent=gene-AC56_RS16855;Dbxref=GenBank:WP_032175328.1;Name=WP_032175328.1;end_range=1466,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS16855;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032175328.1;transl_table=11
##sequence-region NZ_JJLS01000144.1 1 10249
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000144.1	RefSeq	region	1	10249	.	+	.	ID=NZ_JJLS01000144.1:1..10249;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000144.1	RefSeq	gene	1	366	.	+	.	ID=gene-AC56_RS16850;Name=AC56_RS16850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS16850;old_locus_tag=AC56_1088;partial=true;start_range=.,1
NZ_JJLS01000144.1	Protein Homology	CDS	1	366	.	+	0	ID=cds-WP_024167268.1;Parent=gene-AC56_RS16850;Dbxref=GenBank:WP_024167268.1;Name=WP_024167268.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS16850;partial=true;product=IS1 family transposase;protein_id=WP_024167268.1;start_range=.,1;transl_table=11
NZ_JJLS01000144.1	RefSeq	pseudogene	375	1088	.	-	.	ID=gene-AC56_RS16845;Name=AC56_RS16845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS16845;old_locus_tag=AC56_1089;partial=true;pseudo=true;start_range=.,375
NZ_JJLS01000144.1	Protein Homology	CDS	375	1088	.	-	0	ID=cds-AC56_RS16845;Parent=gene-AC56_RS16845;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415542.1;locus_tag=AC56_RS16845;partial=true;product=polysaccharide deacetylase family protein;pseudo=true;start_range=.,375;transl_table=11
NZ_JJLS01000144.1	RefSeq	pseudogene	1060	1410	.	+	.	ID=gene-AC56_RS16840;Name=AC56_RS16840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS16840;old_locus_tag=AC56_1090;partial=true;pseudo=true;start_range=.,1060
NZ_JJLS01000144.1	Protein Homology	CDS	1060	1410	.	+	0	ID=cds-AC56_RS16840;Parent=gene-AC56_RS16840;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309324.2;locus_tag=AC56_RS16840;partial=true;product=ACP S-malonyltransferase;pseudo=true;start_range=.,1060;transl_table=11
NZ_JJLS01000144.1	RefSeq	gene	1407	2393	.	+	.	ID=gene-AC56_RS16835;Name=ycdU;gbkey=Gene;gene=ycdU;gene_biotype=protein_coding;locus_tag=AC56_RS16835;old_locus_tag=AC56_1091
NZ_JJLS01000144.1	Protein Homology	CDS	1407	2393	.	+	0	ID=cds-WP_032278097.1;Parent=gene-AC56_RS16835;Dbxref=GenBank:WP_032278097.1;Name=WP_032278097.1;gbkey=CDS;gene=ycdU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415548.1;locus_tag=AC56_RS16835;product=protein YcdU;protein_id=WP_032278097.1;transl_table=11
NZ_JJLS01000144.1	RefSeq	gene	2760	3962	.	+	.	ID=gene-AC56_RS16830;Name=AC56_RS16830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS16830;old_locus_tag=AC56_1092
NZ_JJLS01000144.1	Protein Homology	CDS	2760	3962	.	+	0	ID=cds-WP_000279872.1;Parent=gene-AC56_RS16830;Dbxref=GenBank:WP_000279872.1;Name=WP_000279872.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309326.1;locus_tag=AC56_RS16830;product=tyrosine-type recombinase/integrase;protein_id=WP_000279872.1;transl_table=11
NZ_JJLS01000144.1	RefSeq	gene	4149	5966	.	-	.	ID=gene-AC56_RS16825;Name=AC56_RS16825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS16825;old_locus_tag=AC56_1093
NZ_JJLS01000144.1	Protein Homology	CDS	4149	5966	.	-	0	ID=cds-WP_032278098.1;Parent=gene-AC56_RS16825;Dbxref=GenBank:WP_032278098.1;Name=WP_032278098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309327.1;locus_tag=AC56_RS16825;product=hypothetical protein;protein_id=WP_032278098.1;transl_table=11
NZ_JJLS01000144.1	RefSeq	pseudogene	6163	6855	.	+	.	ID=gene-AC56_RS31110;Name=AC56_RS31110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS31110;pseudo=true
NZ_JJLS01000144.1	Protein Homology	CDS	6163	6855	.	+	0	ID=cds-AC56_RS31110;Parent=gene-AC56_RS31110;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477181.1;locus_tag=AC56_RS31110;product=IS1 family transposase;pseudo=true;transl_table=11
NZ_JJLS01000144.1	RefSeq	gene	7078	7374	.	+	.	ID=gene-AC56_RS0125510;Name=AC56_RS0125510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0125510
NZ_JJLS01000144.1	Protein Homology	CDS	7078	7374	.	+	0	ID=cds-WP_001303889.1;Parent=gene-AC56_RS0125510;Dbxref=GenBank:WP_001303889.1;Name=WP_001303889.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309329.1;locus_tag=AC56_RS0125510;product=helix-turn-helix transcriptional regulator;protein_id=WP_001303889.1;transl_table=11
NZ_JJLS01000144.1	RefSeq	gene	7682	7798	.	+	.	ID=gene-AC56_RS33245;Name=AC56_RS33245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33245
NZ_JJLS01000144.1	Protein Homology	CDS	7682	7798	.	+	0	ID=cds-WP_001451890.1;Parent=gene-AC56_RS33245;Dbxref=GenBank:WP_001451890.1;Name=WP_001451890.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024547.6;locus_tag=AC56_RS33245;product=hypothetical protein;protein_id=WP_001451890.1;transl_table=11
NZ_JJLS01000144.1	RefSeq	pseudogene	8017	9117	.	+	.	ID=gene-AC56_RS16815;Name=AC56_RS16815;end_range=9117,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS16815;old_locus_tag=AC56_1096;partial=true;pseudo=true
NZ_JJLS01000144.1	Protein Homology	CDS	8017	9117	.	+	0	ID=cds-AC56_RS16815;Parent=gene-AC56_RS16815;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=9117,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309330.1;locus_tag=AC56_RS16815;partial=true;product=YfjI family protein;pseudo=true;transl_table=11
NZ_JJLS01000144.1	RefSeq	gene	9289	10249	.	-	.	ID=gene-AC56_RS16810;Name=AC56_RS16810;end_range=10249,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS16810;old_locus_tag=AC56_1097;partial=true
NZ_JJLS01000144.1	Protein Homology	CDS	9289	10249	.	-	1	ID=cds-WP_032282478.1-7;Parent=gene-AC56_RS16810;Dbxref=GenBank:WP_032282478.1;Name=WP_032282478.1;Ontology_term=GO:0006313,GO:0004803;end_range=10249,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS16810;partial=true;product=IS4-like element IS421 family transposase;protein_id=WP_032282478.1;transl_table=11
##sequence-region NZ_JJLS01000145.1 1 6483
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000145.1	RefSeq	region	1	6483	.	+	.	ID=NZ_JJLS01000145.1:1..6483;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000145.1	RefSeq	pseudogene	1	323	.	-	.	ID=gene-AC56_RS0125520;Name=AC56_RS0125520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0125520;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000145.1	Protein Homology	CDS	1	323	.	-	0	ID=cds-AC56_RS0125520;Parent=gene-AC56_RS0125520;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS0125520;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000145.1	RefSeq	gene	374	1006	.	-	.	ID=gene-AC56_RS16805;Name=yecA;gbkey=Gene;gene=yecA;gene_biotype=protein_coding;locus_tag=AC56_RS16805;old_locus_tag=AC56_1099
NZ_JJLS01000145.1	Protein Homology	CDS	374	1006	.	-	0	ID=cds-WP_032278419.1;Parent=gene-AC56_RS16805;Dbxref=GenBank:WP_032278419.1;Name=WP_032278419.1;gbkey=CDS;gene=yecA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416421.1;locus_tag=AC56_RS16805;product=UPF0149 family protein YecA;protein_id=WP_032278419.1;transl_table=11
NZ_JJLS01000145.1	RefSeq	gene	1202	1288	.	-	.	ID=gene-AC56_RS16800;Name=AC56_RS16800;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS16800;old_locus_tag=AC56_1100
NZ_JJLS01000145.1	tRNAscan-SE	tRNA	1202	1288	.	-	.	ID=rna-AC56_RS16800;Parent=gene-AC56_RS16800;anticodon=(pos:complement(1252..1254));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS16800;product=tRNA-Leu
NZ_JJLS01000145.1	tRNAscan-SE	exon	1202	1288	.	-	.	ID=exon-AC56_RS16800-1;Parent=rna-AC56_RS16800;anticodon=(pos:complement(1252..1254));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS16800;product=tRNA-Leu
NZ_JJLS01000145.1	RefSeq	gene	1301	1374	.	-	.	ID=gene-AC56_RS16795;Name=AC56_RS16795;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS16795;old_locus_tag=AC56_1101
NZ_JJLS01000145.1	tRNAscan-SE	tRNA	1301	1374	.	-	.	ID=rna-AC56_RS16795;Parent=gene-AC56_RS16795;anticodon=(pos:complement(1340..1342));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS16795;product=tRNA-Cys
NZ_JJLS01000145.1	tRNAscan-SE	exon	1301	1374	.	-	.	ID=exon-AC56_RS16795-1;Parent=rna-AC56_RS16795;anticodon=(pos:complement(1340..1342));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS16795;product=tRNA-Cys
NZ_JJLS01000145.1	RefSeq	gene	1429	1504	.	-	.	ID=gene-AC56_RS16790;Name=AC56_RS16790;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS16790;old_locus_tag=AC56_1102
NZ_JJLS01000145.1	tRNAscan-SE	tRNA	1429	1504	.	-	.	ID=rna-AC56_RS16790;Parent=gene-AC56_RS16790;anticodon=(pos:complement(1469..1471));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS16790;product=tRNA-Gly
NZ_JJLS01000145.1	tRNAscan-SE	exon	1429	1504	.	-	.	ID=exon-AC56_RS16790-1;Parent=rna-AC56_RS16790;anticodon=(pos:complement(1469..1471));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS16790;product=tRNA-Gly
NZ_JJLS01000145.1	RefSeq	gene	1656	2204	.	-	.	ID=gene-AC56_RS16785;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=AC56_RS16785;old_locus_tag=AC56_1103
NZ_JJLS01000145.1	Protein Homology	CDS	1656	2204	.	-	0	ID=cds-WP_032278420.1;Parent=gene-AC56_RS16785;Dbxref=GenBank:WP_032278420.1;Name=WP_032278420.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310677.1;locus_tag=AC56_RS16785;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_032278420.1;transl_table=11
NZ_JJLS01000145.1	RefSeq	gene	2261	4093	.	-	.	ID=gene-AC56_RS16780;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=AC56_RS16780;old_locus_tag=AC56_1104
NZ_JJLS01000145.1	Protein Homology	CDS	2261	4093	.	-	0	ID=cds-WP_001283421.1;Parent=gene-AC56_RS16780;Dbxref=GenBank:WP_001283421.1;Name=WP_001283421.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310678.2;locus_tag=AC56_RS16780;product=excinuclease ABC subunit UvrC;protein_id=WP_001283421.1;transl_table=11
NZ_JJLS01000145.1	RefSeq	gene	4090	4746	.	-	.	ID=gene-AC56_RS16775;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;locus_tag=AC56_RS16775;old_locus_tag=AC56_1105
NZ_JJLS01000145.1	Protein Homology	CDS	4090	4746	.	-	0	ID=cds-WP_032278421.1;Parent=gene-AC56_RS16775;Dbxref=GenBank:WP_032278421.1;Name=WP_032278421.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=uvrY;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310679.1;locus_tag=AC56_RS16775;product=UvrY/SirA/GacA family response regulator transcription factor;protein_id=WP_032278421.1;transl_table=11
NZ_JJLS01000145.1	RefSeq	gene	4888	5004	.	+	.	ID=gene-AC56_RS33710;Name=AC56_RS33710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33710;old_locus_tag=AC56_1106
NZ_JJLS01000145.1	Protein Homology	CDS	4888	5004	.	+	0	ID=cds-WP_001302039.1;Parent=gene-AC56_RS33710;Dbxref=GenBank:WP_001302039.1;Name=WP_001302039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001302039.1;locus_tag=AC56_RS33710;product=hypothetical protein;protein_id=WP_001302039.1;transl_table=11
NZ_JJLS01000145.1	RefSeq	gene	5042	5218	.	+	.	ID=gene-AC56_RS32680;Name=yecU;gbkey=Gene;gene=yecU;gene_biotype=protein_coding;locus_tag=AC56_RS32680;old_locus_tag=AC56_1107
NZ_JJLS01000145.1	Protein Homology	CDS	5042	5218	.	+	0	ID=cds-WP_032278422.1;Parent=gene-AC56_RS32680;Dbxref=GenBank:WP_032278422.1;Name=WP_032278422.1;gbkey=CDS;gene=yecU;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518796.1;locus_tag=AC56_RS32680;product=protein YecU;protein_id=WP_032278422.1;transl_table=11
NZ_JJLS01000145.1	RefSeq	gene	5205	5429	.	+	.	ID=gene-AC56_RS16770;Name=yecF;gbkey=Gene;gene=yecF;gene_biotype=protein_coding;locus_tag=AC56_RS16770;old_locus_tag=AC56_1108
NZ_JJLS01000145.1	Protein Homology	CDS	5205	5429	.	+	0	ID=cds-WP_000106474.1;Parent=gene-AC56_RS16770;Dbxref=GenBank:WP_000106474.1;Name=WP_000106474.1;gbkey=CDS;gene=yecF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416425.1;locus_tag=AC56_RS16770;product=DUF2594 family protein YecF;protein_id=WP_000106474.1;transl_table=11
NZ_JJLS01000145.1	RefSeq	gene	5497	6219	.	-	.	ID=gene-AC56_RS16765;Name=sdiA;gbkey=Gene;gene=sdiA;gene_biotype=protein_coding;locus_tag=AC56_RS16765;old_locus_tag=AC56_1109
NZ_JJLS01000145.1	Protein Homology	CDS	5497	6219	.	-	0	ID=cds-WP_001154273.1;Parent=gene-AC56_RS16765;Dbxref=GenBank:WP_001154273.1;Name=WP_001154273.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=sdiA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310681.1;locus_tag=AC56_RS16765;product=transcriptional regulator SdiA;protein_id=WP_001154273.1;transl_table=11
##sequence-region NZ_JJLS01000146.1 1 32569
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000146.1	RefSeq	region	1	32569	.	+	.	ID=NZ_JJLS01000146.1:1..32569;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000146.1	RefSeq	pseudogene	1	573	.	-	.	ID=gene-AC56_RS32030;Name=AC56_RS32030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS32030;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000146.1	Protein Homology	CDS	1	573	.	-	0	ID=cds-AC56_RS32030;Parent=gene-AC56_RS32030;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AC56_RS32030;partial=true;product=transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000146.1	cmsearch	sequence_feature	176	292	.	-	.	ID=id-AC56_RS32030;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS32030;pseudo=true
NZ_JJLS01000146.1	RefSeq	pseudogene	623	1249	.	+	.	ID=gene-AC56_RS16750;Name=AC56_RS16750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS16750;old_locus_tag=AC56_1112;partial=true;pseudo=true;start_range=.,623
NZ_JJLS01000146.1	Protein Homology	CDS	623	1249	.	+	0	ID=cds-AC56_RS16750;Parent=gene-AC56_RS16750;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309423.1;locus_tag=AC56_RS16750;partial=true;product=autotransporter domain-containing protein;pseudo=true;start_range=.,623;transl_table=11
NZ_JJLS01000146.1	RefSeq	gene	1360	3744	.	+	.	ID=gene-AC56_RS16745;Name=AC56_RS16745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS16745;old_locus_tag=AC56_1113
NZ_JJLS01000146.1	Protein Homology	CDS	1360	3744	.	+	0	ID=cds-WP_032278111.1;Parent=gene-AC56_RS16745;Dbxref=GenBank:WP_032278111.1;Name=WP_032278111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309424.1;locus_tag=AC56_RS16745;product=dynamin family protein;protein_id=WP_032278111.1;transl_table=11
NZ_JJLS01000146.1	RefSeq	gene	3741	4646	.	+	.	ID=gene-AC56_RS16740;Name=AC56_RS16740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS16740;old_locus_tag=AC56_1114
NZ_JJLS01000146.1	Protein Homology	CDS	3741	4646	.	+	0	ID=cds-WP_032278112.1;Parent=gene-AC56_RS16740;Dbxref=GenBank:WP_032278112.1;Name=WP_032278112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309425.1;locus_tag=AC56_RS16740;product=diguanylate cyclase regulator RdcB family protein;protein_id=WP_032278112.1;transl_table=11
NZ_JJLS01000146.1	RefSeq	gene	4643	5713	.	+	.	ID=gene-AC56_RS16735;Name=AC56_RS16735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS16735;old_locus_tag=AC56_1115
NZ_JJLS01000146.1	Protein Homology	CDS	4643	5713	.	+	0	ID=cds-WP_000102669.1;Parent=gene-AC56_RS16735;Dbxref=GenBank:WP_000102669.1;Name=WP_000102669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309426.1;locus_tag=AC56_RS16735;product=patatin-like phospholipase family protein;protein_id=WP_000102669.1;transl_table=11
NZ_JJLS01000146.1	RefSeq	gene	6053	6871	.	+	.	ID=gene-AC56_RS16725;Name=AC56_RS16725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS16725;old_locus_tag=AC56_1117
NZ_JJLS01000146.1	Protein Homology	CDS	6053	6871	.	+	0	ID=cds-WP_001234682.1;Parent=gene-AC56_RS16725;Dbxref=GenBank:WP_001234682.1;Name=WP_001234682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309428.1;locus_tag=AC56_RS16725;product=DUF932 domain-containing protein;protein_id=WP_001234682.1;transl_table=11
NZ_JJLS01000146.1	RefSeq	gene	6962	7447	.	+	.	ID=gene-AC56_RS16720;Name=AC56_RS16720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS16720;old_locus_tag=AC56_1118
NZ_JJLS01000146.1	Protein Homology	CDS	6962	7447	.	+	0	ID=cds-WP_000214398.1;Parent=gene-AC56_RS16720;Dbxref=GenBank:WP_000214398.1;Name=WP_000214398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309429.1;locus_tag=AC56_RS16720;product=antirestriction protein;protein_id=WP_000214398.1;transl_table=11
NZ_JJLS01000146.1	RefSeq	gene	7463	7939	.	+	.	ID=gene-AC56_RS16715;Name=AC56_RS16715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS16715;old_locus_tag=AC56_1119
NZ_JJLS01000146.1	Protein Homology	CDS	7463	7939	.	+	0	ID=cds-WP_001186738.1;Parent=gene-AC56_RS16715;Dbxref=GenBank:WP_001186738.1;Name=WP_001186738.1;Ontology_term=GO:0006508,GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309430.1;locus_tag=AC56_RS16715;product=JAB domain-containing protein;protein_id=WP_001186738.1;transl_table=11
NZ_JJLS01000146.1	RefSeq	gene	8002	8223	.	+	.	ID=gene-AC56_RS16710;Name=yeeT;gbkey=Gene;gene=yeeT;gene_biotype=protein_coding;locus_tag=AC56_RS16710;old_locus_tag=AC56_1120
NZ_JJLS01000146.1	Protein Homology	CDS	8002	8223	.	+	0	ID=cds-WP_001220314.1;Parent=gene-AC56_RS16710;Dbxref=GenBank:WP_001220314.1;Name=WP_001220314.1;gbkey=CDS;gene=yeeT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309431.1;locus_tag=AC56_RS16710;product=DUF987 domain-containing protein;protein_id=WP_001220314.1;transl_table=11
NZ_JJLS01000146.1	RefSeq	gene	8386	8760	.	+	.	ID=gene-AC56_RS16700;Name=AC56_RS16700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS16700;old_locus_tag=AC56_1122
NZ_JJLS01000146.1	Protein Homology	CDS	8386	8760	.	+	0	ID=cds-WP_001280955.1;Parent=gene-AC56_RS16700;Dbxref=GenBank:WP_001280955.1;Name=WP_001280955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309432.1;locus_tag=AC56_RS16700;product=type IV toxin-antitoxin system YeeU family antitoxin;protein_id=WP_001280955.1;transl_table=11
NZ_JJLS01000146.1	RefSeq	gene	8807	9181	.	+	.	ID=gene-AC56_RS16695;Name=AC56_RS16695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS16695;old_locus_tag=AC56_1123
NZ_JJLS01000146.1	Protein Homology	CDS	8807	9181	.	+	0	ID=cds-WP_000854914.1;Parent=gene-AC56_RS16695;Dbxref=GenBank:WP_000854914.1;Name=WP_000854914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309433.1;locus_tag=AC56_RS16695;product=TA system toxin CbtA family protein;protein_id=WP_000854914.1;transl_table=11
NZ_JJLS01000146.1	RefSeq	gene	9178	9669	.	+	.	ID=gene-AC56_RS16690;Name=AC56_RS16690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS16690;old_locus_tag=AC56_1124
NZ_JJLS01000146.1	Protein Homology	CDS	9178	9669	.	+	0	ID=cds-WP_000976857.1;Parent=gene-AC56_RS16690;Dbxref=GenBank:WP_000976857.1;Name=WP_000976857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309434.3;locus_tag=AC56_RS16690;product=DUF5983 family protein;protein_id=WP_000976857.1;transl_table=11
NZ_JJLS01000146.1	RefSeq	gene	9681	9878	.	+	.	ID=gene-AC56_RS16685;Name=AC56_RS16685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS16685;old_locus_tag=AC56_1125
NZ_JJLS01000146.1	Protein Homology	CDS	9681	9878	.	+	0	ID=cds-WP_032278113.1;Parent=gene-AC56_RS16685;Dbxref=GenBank:WP_032278113.1;Name=WP_032278113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309435.1;locus_tag=AC56_RS16685;product=DUF957 domain-containing protein;protein_id=WP_032278113.1;transl_table=11
NZ_JJLS01000146.1	RefSeq	gene	9963	10805	.	+	.	ID=gene-AC56_RS16680;Name=AC56_RS16680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS16680;old_locus_tag=AC56_1126
NZ_JJLS01000146.1	Protein Homology	CDS	9963	10805	.	+	0	ID=cds-WP_032278116.1;Parent=gene-AC56_RS16680;Dbxref=GenBank:WP_032278116.1;Name=WP_032278116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309436.1;locus_tag=AC56_RS16680;product=DUF4942 domain-containing protein;protein_id=WP_032278116.1;transl_table=11
NZ_JJLS01000146.1	RefSeq	gene	10955	11042	.	-	.	ID=gene-AC56_RS16675;Name=AC56_RS16675;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS16675;old_locus_tag=AC56_1127
NZ_JJLS01000146.1	tRNAscan-SE	tRNA	10955	11042	.	-	.	ID=rna-AC56_RS16675;Parent=gene-AC56_RS16675;anticodon=(pos:complement(11006..11008));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS16675;product=tRNA-Ser
NZ_JJLS01000146.1	tRNAscan-SE	exon	10955	11042	.	-	.	ID=exon-AC56_RS16675-1;Parent=rna-AC56_RS16675;anticodon=(pos:complement(11006..11008));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS16675;product=tRNA-Ser
NZ_JJLS01000146.1	RefSeq	gene	11276	12214	.	+	.	ID=gene-AC56_RS16670;Name=ghrA;gbkey=Gene;gene=ghrA;gene_biotype=protein_coding;locus_tag=AC56_RS16670;old_locus_tag=AC56_1129
NZ_JJLS01000146.1	Protein Homology	CDS	11276	12214	.	+	0	ID=cds-WP_000351315.1;Parent=gene-AC56_RS16670;Dbxref=GenBank:WP_000351315.1;Name=WP_000351315.1;Ontology_term=GO:0016618,GO:0030267,GO:0051287;gbkey=CDS;gene=ghrA;go_function=hydroxypyruvate reductase [NAD(P)H] activity|0016618||IEA,glyoxylate reductase (NADPH) activity|0030267||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415551.2;locus_tag=AC56_RS16670;product=glyoxylate/hydroxypyruvate reductase GhrA;protein_id=WP_000351315.1;transl_table=11
NZ_JJLS01000146.1	RefSeq	gene	12269	13006	.	+	.	ID=gene-AC56_RS16665;Name=ycdX;gbkey=Gene;gene=ycdX;gene_biotype=protein_coding;locus_tag=AC56_RS16665;old_locus_tag=AC56_1130
NZ_JJLS01000146.1	Protein Homology	CDS	12269	13006	.	+	0	ID=cds-WP_032278118.1;Parent=gene-AC56_RS16665;Dbxref=GenBank:WP_032278118.1;Name=WP_032278118.1;gbkey=CDS;gene=ycdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309438.1;locus_tag=AC56_RS16665;product=zinc-binding phosphatase;protein_id=WP_032278118.1;transl_table=11
NZ_JJLS01000146.1	RefSeq	gene	13030	13584	.	+	.	ID=gene-AC56_RS16660;Name=ycdY;gbkey=Gene;gene=ycdY;gene_biotype=protein_coding;locus_tag=AC56_RS16660;old_locus_tag=AC56_1131
NZ_JJLS01000146.1	Protein Homology	CDS	13030	13584	.	+	0	ID=cds-WP_001001902.1;Parent=gene-AC56_RS16660;Dbxref=GenBank:WP_001001902.1;Name=WP_001001902.1;gbkey=CDS;gene=ycdY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309439.1;locus_tag=AC56_RS16660;product=molecular chaperone YcdY;protein_id=WP_001001902.1;transl_table=11
NZ_JJLS01000146.1	RefSeq	gene	13686	14177	.	+	.	ID=gene-AC56_RS16655;Name=ycdZ;gbkey=Gene;gene=ycdZ;gene_biotype=protein_coding;locus_tag=AC56_RS16655;old_locus_tag=AC56_1133
NZ_JJLS01000146.1	Protein Homology	CDS	13686	14177	.	+	0	ID=cds-WP_032278137.1;Parent=gene-AC56_RS16655;Dbxref=GenBank:WP_032278137.1;Name=WP_032278137.1;Ontology_term=GO:0005886;gbkey=CDS;gene=ycdZ;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415554.4;locus_tag=AC56_RS16655;product=DUF1097 domain-containing protein;protein_id=WP_032278137.1;transl_table=11
NZ_JJLS01000146.1	RefSeq	gene	14241	15074	.	-	.	ID=gene-AC56_RS16650;Name=csgG;gbkey=Gene;gene=csgG;gene_biotype=protein_coding;locus_tag=AC56_RS16650;old_locus_tag=AC56_1134
NZ_JJLS01000146.1	Protein Homology	CDS	14241	15074	.	-	0	ID=cds-WP_001189321.1;Parent=gene-AC56_RS16650;Dbxref=GenBank:WP_001189321.1;Name=WP_001189321.1;gbkey=CDS;gene=csgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309441.1;locus_tag=AC56_RS16650;product=curli production assembly/transport protein CsgG;protein_id=WP_001189321.1;transl_table=11
NZ_JJLS01000146.1	RefSeq	gene	15101	15517	.	-	.	ID=gene-AC56_RS16645;Name=csgF;gbkey=Gene;gene=csgF;gene_biotype=protein_coding;locus_tag=AC56_RS16645;old_locus_tag=AC56_1135
NZ_JJLS01000146.1	Protein Homology	CDS	15101	15517	.	-	0	ID=cds-WP_001264088.1;Parent=gene-AC56_RS16645;Dbxref=GenBank:WP_001264088.1;Name=WP_001264088.1;gbkey=CDS;gene=csgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309442.1;locus_tag=AC56_RS16645;product=curli production assembly/transport protein CsgF;protein_id=WP_001264088.1;transl_table=11
NZ_JJLS01000146.1	RefSeq	gene	15542	15931	.	-	.	ID=gene-AC56_RS16640;Name=csgE;gbkey=Gene;gene=csgE;gene_biotype=protein_coding;locus_tag=AC56_RS16640;old_locus_tag=AC56_1136
NZ_JJLS01000146.1	Protein Homology	CDS	15542	15931	.	-	0	ID=cds-WP_000833288.1;Parent=gene-AC56_RS16640;Dbxref=GenBank:WP_000833288.1;Name=WP_000833288.1;gbkey=CDS;gene=csgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309443.1;locus_tag=AC56_RS16640;product=curli production assembly/transport protein CsgE;protein_id=WP_000833288.1;transl_table=11
NZ_JJLS01000146.1	RefSeq	gene	15936	16586	.	-	.	ID=gene-AC56_RS16635;Name=csgD;gbkey=Gene;gene=csgD;gene_biotype=protein_coding;locus_tag=AC56_RS16635;old_locus_tag=AC56_1137
NZ_JJLS01000146.1	Protein Homology	CDS	15936	16586	.	-	0	ID=cds-WP_000481505.1;Parent=gene-AC56_RS16635;Dbxref=GenBank:WP_000481505.1;Name=WP_000481505.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=csgD;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309444.1;locus_tag=AC56_RS16635;product=biofilm master transcriptional regulator CsgD;protein_id=WP_000481505.1;transl_table=11
NZ_JJLS01000146.1	RefSeq	gene	17341	17796	.	+	.	ID=gene-AC56_RS16625;Name=csgB;gbkey=Gene;gene=csgB;gene_biotype=protein_coding;locus_tag=AC56_RS16625;old_locus_tag=AC56_1140
NZ_JJLS01000146.1	Protein Homology	CDS	17341	17796	.	+	0	ID=cds-WP_000791650.1;Parent=gene-AC56_RS16625;Dbxref=GenBank:WP_000791650.1;Name=WP_000791650.1;gbkey=CDS;gene=csgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309446.1;locus_tag=AC56_RS16625;product=curli minor subunit CsgB;protein_id=WP_000791650.1;transl_table=11
NZ_JJLS01000146.1	RefSeq	gene	17837	18292	.	+	.	ID=gene-AC56_RS16620;Name=csgA;gbkey=Gene;gene=csgA;gene_biotype=protein_coding;locus_tag=AC56_RS16620;old_locus_tag=AC56_1141
NZ_JJLS01000146.1	Protein Homology	CDS	17837	18292	.	+	0	ID=cds-WP_000771437.1;Parent=gene-AC56_RS16620;Dbxref=GenBank:WP_000771437.1;Name=WP_000771437.1;gbkey=CDS;gene=csgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415560.1;locus_tag=AC56_RS16620;product=curli major subunit CsgA;protein_id=WP_000771437.1;transl_table=11
NZ_JJLS01000146.1	RefSeq	gene	18351	18683	.	+	.	ID=gene-AC56_RS0125530;Name=csgC;gbkey=Gene;gene=csgC;gene_biotype=protein_coding;locus_tag=AC56_RS0125530
NZ_JJLS01000146.1	Protein Homology	CDS	18351	18683	.	+	0	ID=cds-WP_001094300.1;Parent=gene-AC56_RS0125530;Dbxref=GenBank:WP_001094300.1;Name=WP_001094300.1;gbkey=CDS;gene=csgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415561.1;locus_tag=AC56_RS0125530;product=curli assembly chaperone CsgC;protein_id=WP_001094300.1;transl_table=11
NZ_JJLS01000146.1	RefSeq	gene	18804	19115	.	+	.	ID=gene-AC56_RS16615;Name=ymdA;gbkey=Gene;gene=ymdA;gene_biotype=protein_coding;locus_tag=AC56_RS16615;old_locus_tag=AC56_1142
NZ_JJLS01000146.1	Protein Homology	CDS	18804	19115	.	+	0	ID=cds-WP_000489579.1;Parent=gene-AC56_RS16615;Dbxref=GenBank:WP_000489579.1;Name=WP_000489579.1;gbkey=CDS;gene=ymdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309449.1;locus_tag=AC56_RS16615;product=protein YmdA;protein_id=WP_000489579.1;transl_table=11
NZ_JJLS01000146.1	RefSeq	gene	19210	19743	.	+	.	ID=gene-AC56_RS16610;Name=ymdB;gbkey=Gene;gene=ymdB;gene_biotype=protein_coding;locus_tag=AC56_RS16610;old_locus_tag=AC56_1143
NZ_JJLS01000146.1	Protein Homology	CDS	19210	19743	.	+	0	ID=cds-WP_000857405.1;Parent=gene-AC56_RS16610;Dbxref=GenBank:WP_000857405.1;Name=WP_000857405.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ymdB;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309450.1;locus_tag=AC56_RS16610;product=O-acetyl-ADP-ribose deacetylase;protein_id=WP_000857405.1;transl_table=11
NZ_JJLS01000146.1	RefSeq	gene	19685	21166	.	+	.	ID=gene-AC56_RS16605;Name=clsC;gbkey=Gene;gene=clsC;gene_biotype=protein_coding;locus_tag=AC56_RS16605;old_locus_tag=AC56_1144
NZ_JJLS01000146.1	Protein Homology	CDS	19685	21166	.	+	0	ID=cds-WP_001307714.1;Parent=gene-AC56_RS16605;Dbxref=GenBank:WP_001307714.1;Name=WP_001307714.1;gbkey=CDS;gene=clsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706957.2;locus_tag=AC56_RS16605;product=cardiolipin synthase ClsC;protein_id=WP_001307714.1;transl_table=11
NZ_JJLS01000146.1	RefSeq	gene	21174	22331	.	-	.	ID=gene-AC56_RS16600;Name=mdoC;gbkey=Gene;gene=mdoC;gene_biotype=protein_coding;locus_tag=AC56_RS16600;old_locus_tag=AC56_1145
NZ_JJLS01000146.1	Protein Homology	CDS	21174	22331	.	-	0	ID=cds-WP_001070350.1;Parent=gene-AC56_RS16600;Dbxref=GenBank:WP_001070350.1;Name=WP_001070350.1;Ontology_term=GO:0016740;gbkey=CDS;gene=mdoC;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706958.2;locus_tag=AC56_RS16600;product=glucans biosynthesis protein MdoC;protein_id=WP_001070350.1;transl_table=11
NZ_JJLS01000146.1	RefSeq	gene	22725	24260	.	+	.	ID=gene-AC56_RS16590;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=protein_coding;locus_tag=AC56_RS16590;old_locus_tag=AC56_1147
NZ_JJLS01000146.1	Protein Homology	CDS	22725	24260	.	+	0	ID=cds-WP_001343212.1;Parent=gene-AC56_RS16590;Dbxref=GenBank:WP_001343212.1;Name=WP_001343212.1;gbkey=CDS;gene=mdoG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415566.1;locus_tag=AC56_RS16590;product=glucans biosynthesis protein MdoG;protein_id=WP_001343212.1;transl_table=11
NZ_JJLS01000146.1	RefSeq	gene	24253	26796	.	+	.	ID=gene-AC56_RS16585;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=AC56_RS16585;old_locus_tag=AC56_1148
NZ_JJLS01000146.1	Protein Homology	CDS	24253	26796	.	+	0	ID=cds-WP_071998937.1;Parent=gene-AC56_RS16585;Dbxref=GenBank:WP_071998937.1;Name=WP_071998937.1;Ontology_term=GO:0016758;gbkey=CDS;gene=mdoH;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415567.1;locus_tag=AC56_RS16585;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=WP_071998937.1;transl_table=11
NZ_JJLS01000146.1	RefSeq	gene	26969	27196	.	+	.	ID=gene-AC56_RS16580;Name=yceK;gbkey=Gene;gene=yceK;gene_biotype=protein_coding;locus_tag=AC56_RS16580;old_locus_tag=AC56_1149
NZ_JJLS01000146.1	Protein Homology	CDS	26969	27196	.	+	0	ID=cds-WP_032278130.1;Parent=gene-AC56_RS16580;Dbxref=GenBank:WP_032278130.1;Name=WP_032278130.1;gbkey=CDS;gene=yceK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309455.1;locus_tag=AC56_RS16580;product=YceK/YidQ family lipoprotein;protein_id=WP_032278130.1;transl_table=11
NZ_JJLS01000146.1	RefSeq	gene	27197	27571	.	-	.	ID=gene-AC56_RS16575;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=protein_coding;locus_tag=AC56_RS16575;old_locus_tag=AC56_1150
NZ_JJLS01000146.1	Protein Homology	CDS	27197	27571	.	-	0	ID=cds-WP_000180056.1;Parent=gene-AC56_RS16575;Dbxref=GenBank:WP_000180056.1;Name=WP_000180056.1;gbkey=CDS;gene=msyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309456.2;locus_tag=AC56_RS16575;product=MysB family protein;protein_id=WP_000180056.1;transl_table=11
NZ_JJLS01000146.1	RefSeq	gene	27654	28880	.	-	.	ID=gene-AC56_RS16570;Name=mdtG;gbkey=Gene;gene=mdtG;gene_biotype=protein_coding;locus_tag=AC56_RS16570;old_locus_tag=AC56_1151
NZ_JJLS01000146.1	Protein Homology	CDS	27654	28880	.	-	0	ID=cds-WP_032278133.1;Parent=gene-AC56_RS16570;Dbxref=GenBank:WP_032278133.1;Name=WP_032278133.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtG;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415571.1;locus_tag=AC56_RS16570;product=multidrug efflux MFS transporter MdtG;protein_id=WP_032278133.1;transl_table=11
NZ_JJLS01000146.1	RefSeq	gene	29052	29972	.	-	.	ID=gene-AC56_RS16565;Name=lpxL;gbkey=Gene;gene=lpxL;gene_biotype=protein_coding;locus_tag=AC56_RS16565;old_locus_tag=AC56_1152
NZ_JJLS01000146.1	Protein Homology	CDS	29052	29972	.	-	0	ID=cds-WP_000183364.1;Parent=gene-AC56_RS16565;Dbxref=GenBank:WP_000183364.1;Name=WP_000183364.1;gbkey=CDS;gene=lpxL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309459.1;locus_tag=AC56_RS16565;product=kdo(2)-lipid IV(A) lauroyltransferase;protein_id=WP_000183364.1;transl_table=11
NZ_JJLS01000146.1	RefSeq	gene	30197	31249	.	+	.	ID=gene-AC56_RS16560;Name=trhO;gbkey=Gene;gene=trhO;gene_biotype=protein_coding;locus_tag=AC56_RS16560;old_locus_tag=AC56_1153
NZ_JJLS01000146.1	Protein Homology	CDS	30197	31249	.	+	0	ID=cds-WP_001144616.1;Parent=gene-AC56_RS16560;Dbxref=GenBank:WP_001144616.1;Name=WP_001144616.1;gbkey=CDS;gene=trhO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706977.2;locus_tag=AC56_RS16560;product=rhodanese-related sulfurtransferase;protein_id=WP_001144616.1;transl_table=11
NZ_JJLS01000146.1	RefSeq	gene	31291	31866	.	-	.	ID=gene-AC56_RS16555;Name=yceI;gbkey=Gene;gene=yceI;gene_biotype=protein_coding;locus_tag=AC56_RS16555;old_locus_tag=AC56_1154
NZ_JJLS01000146.1	Protein Homology	CDS	31291	31866	.	-	0	ID=cds-WP_004015479.1;Parent=gene-AC56_RS16555;Dbxref=GenBank:WP_004015479.1;Name=WP_004015479.1;gbkey=CDS;gene=yceI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309461.1;locus_tag=AC56_RS16555;product=YceI family protein;protein_id=WP_004015479.1;transl_table=11
NZ_JJLS01000146.1	RefSeq	pseudogene	31870	32157	.	-	.	ID=gene-AC56_RS0125545;Name=AC56_RS0125545;end_range=32157,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0125545;partial=true;pseudo=true
NZ_JJLS01000146.1	Protein Homology	CDS	31870	32157	.	-	0	ID=cds-AC56_RS0125545;Parent=gene-AC56_RS0125545;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;end_range=32157,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309462.1;locus_tag=AC56_RS0125545;partial=true;product=cytochrome b;pseudo=true;transl_table=11
NZ_JJLS01000146.1	RefSeq	gene	32173	32569	.	-	.	ID=gene-AC56_RS16550;Name=AC56_RS16550;end_range=32569,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS16550;old_locus_tag=AC56_1156;partial=true
NZ_JJLS01000146.1	Protein Homology	CDS	32173	32569	.	-	1	ID=cds-WP_032282618.1;Parent=gene-AC56_RS16550;Dbxref=GenBank:WP_032282618.1;Name=WP_032282618.1;Ontology_term=GO:0004803;end_range=32569,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS16550;partial=true;product=IS1 family transposase;protein_id=WP_032282618.1;transl_table=11
##sequence-region NZ_JJLS01000147.1 1 62340
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000147.1	RefSeq	region	1	62340	.	+	.	ID=NZ_JJLS01000147.1:1..62340;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000147.1	RefSeq	pseudogene	1	325	.	-	.	ID=gene-AC56_RS0125550;Name=AC56_RS0125550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0125550;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000147.1	Protein Homology	CDS	1	325	.	-	0	ID=cds-AC56_RS0125550;Parent=gene-AC56_RS0125550;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS0125550;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	518	631	.	-	.	ID=gene-AC56_RS16545;Name=AC56_RS16545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS16545;old_locus_tag=AC56_1158
NZ_JJLS01000147.1	Protein Homology	CDS	518	631	.	-	0	ID=cds-WP_001253418.1;Parent=gene-AC56_RS16545;Dbxref=GenBank:WP_001253418.1;Name=WP_001253418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706980.2;locus_tag=AC56_RS16545;product=YceO family protein;protein_id=WP_001253418.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	679	1797	.	-	.	ID=gene-AC56_RS16540;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=AC56_RS16540;old_locus_tag=AC56_1159
NZ_JJLS01000147.1	Protein Homology	CDS	679	1797	.	-	0	ID=cds-WP_000872810.1;Parent=gene-AC56_RS16540;Dbxref=GenBank:WP_000872810.1;Name=WP_000872810.1;Ontology_term=GO:0050131;gbkey=CDS;gene=solA;go_function=N-methyl-L-amino-acid oxidase activity|0050131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309464.1;locus_tag=AC56_RS16540;product=N-methyl-L-tryptophan oxidase;protein_id=WP_000872810.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	1912	2166	.	-	.	ID=gene-AC56_RS16535;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;locus_tag=AC56_RS16535;old_locus_tag=AC56_1160
NZ_JJLS01000147.1	Protein Homology	CDS	1912	2166	.	-	0	ID=cds-WP_000414437.1;Parent=gene-AC56_RS16535;Dbxref=GenBank:WP_000414437.1;Name=WP_000414437.1;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309465.3;locus_tag=AC56_RS16535;product=biofilm formation regulator BssS;protein_id=WP_000414437.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	2456	2701	.	-	.	ID=gene-AC56_RS16530;Name=dinI;gbkey=Gene;gene=dinI;gene_biotype=protein_coding;locus_tag=AC56_RS16530;old_locus_tag=AC56_1161
NZ_JJLS01000147.1	Protein Homology	CDS	2456	2701	.	-	0	ID=cds-WP_001217754.1;Parent=gene-AC56_RS16530;Dbxref=GenBank:WP_001217754.1;Name=WP_001217754.1;gbkey=CDS;gene=dinI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309466.1;locus_tag=AC56_RS16530;product=DNA damage-inducible protein I;protein_id=WP_001217754.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	2775	3821	.	-	.	ID=gene-AC56_RS16525;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=AC56_RS16525;old_locus_tag=AC56_1162
NZ_JJLS01000147.1	Protein Homology	CDS	2775	3821	.	-	0	ID=cds-WP_000126538.1;Parent=gene-AC56_RS16525;Dbxref=GenBank:WP_000126538.1;Name=WP_000126538.1;Ontology_term=GO:0019856,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine nucleobase biosynthetic process|0019856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415580.1;locus_tag=AC56_RS16525;product=dihydroorotase;protein_id=WP_000126538.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	3927	4487	.	-	.	ID=gene-AC56_RS16520;Name=AC56_RS16520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS16520;old_locus_tag=AC56_1163
NZ_JJLS01000147.1	Protein Homology	CDS	3927	4487	.	-	0	ID=cds-WP_001295443.1;Parent=gene-AC56_RS16520;Dbxref=GenBank:WP_001295443.1;Name=WP_001295443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415581.1;locus_tag=AC56_RS16520;product=lipoprotein;protein_id=WP_001295443.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	4621	5268	.	-	.	ID=gene-AC56_RS16515;Name=grxB;gbkey=Gene;gene=grxB;gene_biotype=protein_coding;locus_tag=AC56_RS16515;old_locus_tag=AC56_1164
NZ_JJLS01000147.1	Protein Homology	CDS	4621	5268	.	-	0	ID=cds-WP_032278145.1;Parent=gene-AC56_RS16515;Dbxref=GenBank:WP_032278145.1;Name=WP_032278145.1;Ontology_term=GO:0006749,GO:0004362,GO:0005515;gbkey=CDS;gene=grxB;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309469.1;locus_tag=AC56_RS16515;product=glutaredoxin 2;protein_id=WP_032278145.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	5332	6540	.	-	.	ID=gene-AC56_RS16510;Name=mdtH;gbkey=Gene;gene=mdtH;gene_biotype=protein_coding;locus_tag=AC56_RS16510;old_locus_tag=AC56_1165
NZ_JJLS01000147.1	Protein Homology	CDS	5332	6540	.	-	0	ID=cds-WP_000092206.1;Parent=gene-AC56_RS16510;Dbxref=GenBank:WP_000092206.1;Name=WP_000092206.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtH;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415583.4;locus_tag=AC56_RS16510;product=multidrug efflux MFS transporter MdtH;protein_id=WP_000092206.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	6776	7360	.	+	.	ID=gene-AC56_RS16505;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=AC56_RS16505;old_locus_tag=AC56_1166
NZ_JJLS01000147.1	Protein Homology	CDS	6776	7360	.	+	0	ID=cds-WP_000468186.1;Parent=gene-AC56_RS16505;Dbxref=GenBank:WP_000468186.1;Name=WP_000468186.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rimJ;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309471.1;locus_tag=AC56_RS16505;product=ribosomal protein S5-alanine N-acetyltransferase;protein_id=WP_000468186.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	7371	8018	.	+	.	ID=gene-AC56_RS16500;Name=AC56_RS16500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS16500;old_locus_tag=AC56_1167
NZ_JJLS01000147.1	Protein Homology	CDS	7371	8018	.	+	0	ID=cds-WP_000877116.1;Parent=gene-AC56_RS16500;Dbxref=GenBank:WP_000877116.1;Name=WP_000877116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309472.1;locus_tag=AC56_RS16500;product=YceH family protein;protein_id=WP_000877116.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	8020	8943	.	+	.	ID=gene-AC56_RS16495;Name=AC56_RS16495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS16495;old_locus_tag=AC56_1168
NZ_JJLS01000147.1	Protein Homology	CDS	8020	8943	.	+	0	ID=cds-WP_000736158.1;Parent=gene-AC56_RS16495;Dbxref=GenBank:WP_000736158.1;Name=WP_000736158.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415586.1;locus_tag=AC56_RS16495;product=Gfo/Idh/MocA family protein;protein_id=WP_000736158.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	9053	10588	.	+	.	ID=gene-AC56_RS16490;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=AC56_RS16490;old_locus_tag=AC56_1169
NZ_JJLS01000147.1	Protein Homology	CDS	9053	10588	.	+	0	ID=cds-WP_032278146.1;Parent=gene-AC56_RS16490;Dbxref=GenBank:WP_032278146.1;Name=WP_032278146.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309474.1;locus_tag=AC56_RS16490;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_032278146.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	10628	11044	.	-	.	ID=gene-AC56_RS16485;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=protein_coding;locus_tag=AC56_RS16485;old_locus_tag=AC56_1170
NZ_JJLS01000147.1	Protein Homology	CDS	10628	11044	.	-	0	ID=cds-WP_000197340.1;Parent=gene-AC56_RS16485;Dbxref=GenBank:WP_000197340.1;Name=WP_000197340.1;gbkey=CDS;gene=flgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415588.1;locus_tag=AC56_RS16485;product=flagella biosynthesis chaperone FlgN;protein_id=WP_000197340.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	11049	11342	.	-	.	ID=gene-AC56_RS16480;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=AC56_RS16480;old_locus_tag=AC56_1171
NZ_JJLS01000147.1	Protein Homology	CDS	11049	11342	.	-	0	ID=cds-WP_000020884.1;Parent=gene-AC56_RS16480;Dbxref=GenBank:WP_000020884.1;Name=WP_000020884.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309476.1;locus_tag=AC56_RS16480;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_000020884.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	11418	12077	.	-	.	ID=gene-AC56_RS16475;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=AC56_RS16475;old_locus_tag=AC56_1172
NZ_JJLS01000147.1	Protein Homology	CDS	11418	12077	.	-	0	ID=cds-WP_000879704.1;Parent=gene-AC56_RS16475;Dbxref=GenBank:WP_000879704.1;Name=WP_000879704.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415590.1;locus_tag=AC56_RS16475;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_000879704.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	12233	12649	.	+	.	ID=gene-AC56_RS16470;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=AC56_RS16470;old_locus_tag=AC56_1174
NZ_JJLS01000147.1	Protein Homology	CDS	12233	12649	.	+	0	ID=cds-WP_000884702.1;Parent=gene-AC56_RS16470;Dbxref=GenBank:WP_000884702.1;Name=WP_000884702.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415591.1;locus_tag=AC56_RS16470;product=flagellar basal body rod protein FlgB;protein_id=WP_000884702.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	12653	13057	.	+	.	ID=gene-AC56_RS16465;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=AC56_RS16465;old_locus_tag=AC56_1175
NZ_JJLS01000147.1	Protein Homology	CDS	12653	13057	.	+	0	ID=cds-WP_001196460.1;Parent=gene-AC56_RS16465;Dbxref=GenBank:WP_001196460.1;Name=WP_001196460.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740734.1;locus_tag=AC56_RS16465;product=flagellar basal body rod protein FlgC;protein_id=WP_001196460.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	13069	13764	.	+	.	ID=gene-AC56_RS16460;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=AC56_RS16460;old_locus_tag=AC56_1176
NZ_JJLS01000147.1	Protein Homology	CDS	13069	13764	.	+	0	ID=cds-WP_000020467.1;Parent=gene-AC56_RS16460;Dbxref=GenBank:WP_000020467.1;Name=WP_000020467.1;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309480.1;locus_tag=AC56_RS16460;product=flagellar hook assembly protein FlgD;protein_id=WP_000020467.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	13789	14994	.	+	.	ID=gene-AC56_RS16455;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=AC56_RS16455;old_locus_tag=AC56_1177
NZ_JJLS01000147.1	Protein Homology	CDS	13789	14994	.	+	0	ID=cds-WP_001400210.1;Parent=gene-AC56_RS16455;Dbxref=GenBank:WP_001400210.1;Name=WP_001400210.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309481.1;locus_tag=AC56_RS16455;product=flagellar hook protein FlgE;protein_id=WP_001400210.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	pseudogene	15014	15768	.	+	.	ID=gene-AC56_RS32040;Name=flgF;gbkey=Gene;gene=flgF;gene_biotype=pseudogene;locus_tag=AC56_RS32040;pseudo=true
NZ_JJLS01000147.1	Protein Homology	CDS	15014	15768	.	+	0	ID=cds-AC56_RS32040;Parent=gene-AC56_RS32040;Note=frameshifted;gbkey=CDS;gene=flgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415595.1;locus_tag=AC56_RS32040;product=flagellar basal-body rod protein FlgF;pseudo=true;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	15940	16722	.	+	.	ID=gene-AC56_RS16450;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=AC56_RS16450;old_locus_tag=AC56_1180
NZ_JJLS01000147.1	Protein Homology	CDS	15940	16722	.	+	0	ID=cds-WP_032278147.1;Parent=gene-AC56_RS16450;Dbxref=GenBank:WP_032278147.1;Name=WP_032278147.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819466.1;locus_tag=AC56_RS16450;product=flagellar basal-body rod protein FlgG;protein_id=WP_032278147.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	16775	17473	.	+	.	ID=gene-AC56_RS16445;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=AC56_RS16445;old_locus_tag=AC56_1181
NZ_JJLS01000147.1	Protein Homology	CDS	16775	17473	.	+	0	ID=cds-WP_032278148.1;Parent=gene-AC56_RS16445;Dbxref=GenBank:WP_032278148.1;Name=WP_032278148.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309484.1;locus_tag=AC56_RS16445;product=flagellar basal body L-ring protein FlgH;protein_id=WP_032278148.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	17485	18582	.	+	.	ID=gene-AC56_RS16440;Name=flgI;gbkey=Gene;gene=flgI;gene_biotype=protein_coding;locus_tag=AC56_RS16440;old_locus_tag=AC56_1182
NZ_JJLS01000147.1	Protein Homology	CDS	17485	18582	.	+	0	ID=cds-WP_000589326.1;Parent=gene-AC56_RS16440;Dbxref=GenBank:WP_000589326.1;Name=WP_000589326.1;gbkey=CDS;gene=flgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415598.3;locus_tag=AC56_RS16440;product=flagellar basal body P-ring protein FlgI;protein_id=WP_000589326.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	18582	19523	.	+	.	ID=gene-AC56_RS16435;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=AC56_RS16435;old_locus_tag=AC56_1183
NZ_JJLS01000147.1	Protein Homology	CDS	18582	19523	.	+	0	ID=cds-WP_001295441.1;Parent=gene-AC56_RS16435;Dbxref=GenBank:WP_001295441.1;Name=WP_001295441.1;Ontology_term=GO:0044780,GO:0016798;gbkey=CDS;gene=flgJ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415599.1;locus_tag=AC56_RS16435;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=WP_001295441.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	19589	21232	.	+	.	ID=gene-AC56_RS16430;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=AC56_RS16430;old_locus_tag=AC56_1184
NZ_JJLS01000147.1	Protein Homology	CDS	19589	21232	.	+	0	ID=cds-WP_032278149.1;Parent=gene-AC56_RS16430;Dbxref=GenBank:WP_032278149.1;Name=WP_032278149.1;Ontology_term=GO:0044780,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415600.1;locus_tag=AC56_RS16430;product=flagellar hook-associated protein FlgK;protein_id=WP_032278149.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	21244	22197	.	+	.	ID=gene-AC56_RS16425;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=AC56_RS16425;old_locus_tag=AC56_1185
NZ_JJLS01000147.1	Protein Homology	CDS	21244	22197	.	+	0	ID=cds-WP_001212784.1;Parent=gene-AC56_RS16425;Dbxref=GenBank:WP_001212784.1;Name=WP_001212784.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415601.1;locus_tag=AC56_RS16425;product=flagellar hook-associated protein FlgL;protein_id=WP_001212784.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	22394	25579	.	-	.	ID=gene-AC56_RS16420;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=AC56_RS16420;old_locus_tag=AC56_1186
NZ_JJLS01000147.1	Protein Homology	CDS	22394	25579	.	-	0	ID=cds-WP_032278151.1;Parent=gene-AC56_RS16420;Dbxref=GenBank:WP_032278151.1;Name=WP_032278151.1;Ontology_term=GO:0006396,GO:0003723,GO:0008995;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,ribonuclease E activity|0008995||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309489.1;locus_tag=AC56_RS16420;product=ribonuclease E;protein_id=WP_032278151.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	26152	27111	.	+	.	ID=gene-AC56_RS16415;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=AC56_RS16415;old_locus_tag=AC56_1188
NZ_JJLS01000147.1	Protein Homology	CDS	26152	27111	.	+	0	ID=cds-WP_000846343.1;Parent=gene-AC56_RS16415;Dbxref=GenBank:WP_000846343.1;Name=WP_000846343.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluC;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415604.1;locus_tag=AC56_RS16415;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=WP_000846343.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	27223	27807	.	-	.	ID=gene-AC56_RS16410;Name=yceF;gbkey=Gene;gene=yceF;gene_biotype=protein_coding;locus_tag=AC56_RS16410;old_locus_tag=AC56_1189
NZ_JJLS01000147.1	Protein Homology	CDS	27223	27807	.	-	0	ID=cds-WP_001125202.1;Parent=gene-AC56_RS16410;Dbxref=GenBank:WP_001125202.1;Name=WP_001125202.1;gbkey=CDS;gene=yceF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415605.2;locus_tag=AC56_RS16410;product=7-methyl-GTP pyrophosphatase;protein_id=WP_001125202.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	28006	28527	.	+	.	ID=gene-AC56_RS16405;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=AC56_RS16405;old_locus_tag=AC56_1190
NZ_JJLS01000147.1	Protein Homology	CDS	28006	28527	.	+	0	ID=cds-WP_001174481.1;Parent=gene-AC56_RS16405;Dbxref=GenBank:WP_001174481.1;Name=WP_001174481.1;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001174481.1;locus_tag=AC56_RS16405;product=23S rRNA accumulation protein YceD;protein_id=WP_001174481.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	28579	28752	.	+	.	ID=gene-AC56_RS16400;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=AC56_RS16400;old_locus_tag=AC56_1191
NZ_JJLS01000147.1	Protein Homology	CDS	28579	28752	.	+	0	ID=cds-WP_000290727.1;Parent=gene-AC56_RS16400;Dbxref=GenBank:WP_000290727.1;Name=WP_000290727.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125993.1;locus_tag=AC56_RS16400;product=50S ribosomal protein L32;protein_id=WP_000290727.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	28833	29903	.	+	.	ID=gene-AC56_RS16395;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=AC56_RS16395;old_locus_tag=AC56_1192
NZ_JJLS01000147.1	Protein Homology	CDS	28833	29903	.	+	0	ID=cds-WP_000197578.1;Parent=gene-AC56_RS16395;Dbxref=GenBank:WP_000197578.1;Name=WP_000197578.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415608.2;locus_tag=AC56_RS16395;product=phosphate acyltransferase PlsX;protein_id=WP_000197578.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	29971	30924	.	+	.	ID=gene-AC56_RS16390;Name=fabH;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;locus_tag=AC56_RS16390;old_locus_tag=AC56_1193
NZ_JJLS01000147.1	Protein Homology	CDS	29971	30924	.	+	0	ID=cds-WP_000288146.1;Parent=gene-AC56_RS16390;Dbxref=GenBank:WP_000288146.1;Name=WP_000288146.1;gbkey=CDS;gene=fabH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129019.1;locus_tag=AC56_RS16390;product=beta-ketoacyl-ACP synthase III;protein_id=WP_000288146.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	30940	31869	.	+	.	ID=gene-AC56_RS16385;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=AC56_RS16385;old_locus_tag=AC56_1194
NZ_JJLS01000147.1	Protein Homology	CDS	30940	31869	.	+	0	ID=cds-WP_000191372.1;Parent=gene-AC56_RS16385;Dbxref=GenBank:WP_000191372.1;Name=WP_000191372.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415610.1;locus_tag=AC56_RS16385;product=ACP S-malonyltransferase;protein_id=WP_000191372.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	31882	32616	.	+	.	ID=gene-AC56_RS16380;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=AC56_RS16380;old_locus_tag=AC56_1195
NZ_JJLS01000147.1	Protein Homology	CDS	31882	32616	.	+	0	ID=cds-WP_001008535.1;Parent=gene-AC56_RS16380;Dbxref=GenBank:WP_001008535.1;Name=WP_001008535.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=AC56_RS16380;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_001008535.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	32827	33063	.	+	.	ID=gene-AC56_RS16375;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=AC56_RS16375;old_locus_tag=AC56_1196
NZ_JJLS01000147.1	Protein Homology	CDS	32827	33063	.	+	0	ID=cds-WP_000103754.1;Parent=gene-AC56_RS16375;Dbxref=GenBank:WP_000103754.1;Name=WP_000103754.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535861.1;locus_tag=AC56_RS16375;product=acyl carrier protein;protein_id=WP_000103754.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	33151	34392	.	+	.	ID=gene-AC56_RS16370;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=AC56_RS16370;old_locus_tag=AC56_1197
NZ_JJLS01000147.1	Protein Homology	CDS	33151	34392	.	+	0	ID=cds-WP_000044679.1;Parent=gene-AC56_RS16370;Dbxref=GenBank:WP_000044679.1;Name=WP_000044679.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309500.1;locus_tag=AC56_RS16370;product=beta-ketoacyl-ACP synthase II;protein_id=WP_000044679.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	34512	35321	.	+	.	ID=gene-AC56_RS16365;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=AC56_RS16365;old_locus_tag=AC56_1198
NZ_JJLS01000147.1	Protein Homology	CDS	34512	35321	.	+	0	ID=cds-WP_000478706.1;Parent=gene-AC56_RS16365;Dbxref=GenBank:WP_000478706.1;Name=WP_000478706.1;Ontology_term=GO:0046656,GO:0008696,GO:0030170;gbkey=CDS;gene=pabC;go_function=4-amino-4-deoxychorismate lyase activity|0008696||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707012.1;locus_tag=AC56_RS16365;product=aminodeoxychorismate lyase;protein_id=WP_000478706.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	35324	36346	.	+	.	ID=gene-AC56_RS16360;Name=yceG;gbkey=Gene;gene=yceG;gene_biotype=protein_coding;locus_tag=AC56_RS16360;old_locus_tag=AC56_1199
NZ_JJLS01000147.1	Protein Homology	CDS	35324	36346	.	+	0	ID=cds-WP_032278152.1;Parent=gene-AC56_RS16360;Dbxref=GenBank:WP_032278152.1;Name=WP_032278152.1;gbkey=CDS;gene=yceG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415615.1;locus_tag=AC56_RS16360;product=cell division protein YceG;protein_id=WP_032278152.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	36336	36977	.	+	.	ID=gene-AC56_RS16355;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=AC56_RS16355;old_locus_tag=AC56_1200
NZ_JJLS01000147.1	Protein Homology	CDS	36336	36977	.	+	0	ID=cds-WP_001257000.1;Parent=gene-AC56_RS16355;Dbxref=GenBank:WP_001257000.1;Name=WP_001257000.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415616.1;locus_tag=AC56_RS16355;product=dTMP kinase;protein_id=WP_001257000.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	36974	37978	.	+	.	ID=gene-AC56_RS16350;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=AC56_RS16350;old_locus_tag=AC56_1201
NZ_JJLS01000147.1	Protein Homology	CDS	36974	37978	.	+	0	ID=cds-WP_001267941.1;Parent=gene-AC56_RS16350;Dbxref=GenBank:WP_001267941.1;Name=WP_001267941.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;gene=holB;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309504.1;locus_tag=AC56_RS16350;product=DNA polymerase III subunit delta';protein_id=WP_001267941.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	37989	38786	.	+	.	ID=gene-AC56_RS16345;Name=AC56_RS16345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS16345;old_locus_tag=AC56_1202
NZ_JJLS01000147.1	Protein Homology	CDS	37989	38786	.	+	0	ID=cds-WP_000480245.1;Parent=gene-AC56_RS16345;Dbxref=GenBank:WP_000480245.1;Name=WP_000480245.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309505.1;locus_tag=AC56_RS16345;product=metal-dependent hydrolase;protein_id=WP_000480245.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	39081	40514	.	+	.	ID=gene-AC56_RS16340;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=AC56_RS16340;old_locus_tag=AC56_1203
NZ_JJLS01000147.1	Protein Homology	CDS	39081	40514	.	+	0	ID=cds-WP_032278153.1;Parent=gene-AC56_RS16340;Dbxref=GenBank:WP_032278153.1;Name=WP_032278153.1;Ontology_term=GO:0009401,GO:1904659,GO:0008982,GO:0055056;gbkey=CDS;gene=ptsG;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,D-glucose transmembrane transporter activity|0055056||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,D-glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000475716.1;locus_tag=AC56_RS16340;product=PTS glucose transporter subunit IIBC;protein_id=WP_032278153.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	pseudogene	40574	42763	.	-	.	ID=gene-AC56_RS0125565;Name=fhuE;gbkey=Gene;gene=fhuE;gene_biotype=pseudogene;locus_tag=AC56_RS0125565;pseudo=true
NZ_JJLS01000147.1	Protein Homology	CDS	40574	42763	.	-	0	ID=cds-AC56_RS0125565;Parent=gene-AC56_RS0125565;Note=internal stop;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuE;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309507.1;locus_tag=AC56_RS0125565;product=ferric-rhodotorulic acid/ferric-coprogen receptor FhuE;pseudo=true;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	43097	43456	.	+	.	ID=gene-AC56_RS16335;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=AC56_RS16335;old_locus_tag=AC56_1206
NZ_JJLS01000147.1	Protein Homology	CDS	43097	43456	.	+	0	ID=cds-WP_000807125.1;Parent=gene-AC56_RS16335;Dbxref=GenBank:WP_000807125.1;Name=WP_000807125.1;gbkey=CDS;gene=hinT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415621.3;locus_tag=AC56_RS16335;product=purine nucleoside phosphoramidase;protein_id=WP_000807125.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	43459	43836	.	+	.	ID=gene-AC56_RS16330;Name=AC56_RS16330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS16330;old_locus_tag=AC56_1207
NZ_JJLS01000147.1	Protein Homology	CDS	43459	43836	.	+	0	ID=cds-WP_001225279.1;Parent=gene-AC56_RS16330;Dbxref=GenBank:WP_001225279.1;Name=WP_001225279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309509.1;locus_tag=AC56_RS16330;product=YcfL family protein;protein_id=WP_001225279.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	43850	44491	.	+	.	ID=gene-AC56_RS16325;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=AC56_RS16325;old_locus_tag=AC56_1208
NZ_JJLS01000147.1	Protein Homology	CDS	43850	44491	.	+	0	ID=cds-WP_000164439.1;Parent=gene-AC56_RS16325;Dbxref=GenBank:WP_000164439.1;Name=WP_000164439.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309510.1;locus_tag=AC56_RS16325;product=penicillin-binding protein activator LpoB;protein_id=WP_000164439.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	44472	45296	.	+	.	ID=gene-AC56_RS16320;Name=thiK;gbkey=Gene;gene=thiK;gene_biotype=protein_coding;locus_tag=AC56_RS16320;old_locus_tag=AC56_1209
NZ_JJLS01000147.1	Protein Homology	CDS	44472	45296	.	+	0	ID=cds-WP_001116551.1;Parent=gene-AC56_RS16320;Dbxref=GenBank:WP_001116551.1;Name=WP_001116551.1;Ontology_term=GO:0006772,GO:0016310,GO:0019165;gbkey=CDS;gene=thiK;go_function=thiamine kinase activity|0019165||IEA;go_process=thiamine metabolic process|0006772||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707021.1;locus_tag=AC56_RS16320;product=thiamine kinase;protein_id=WP_001116551.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	45307	46332	.	+	.	ID=gene-AC56_RS16315;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=AC56_RS16315;old_locus_tag=AC56_1210
NZ_JJLS01000147.1	Protein Homology	CDS	45307	46332	.	+	0	ID=cds-WP_000529332.1;Parent=gene-AC56_RS16315;Dbxref=GenBank:WP_000529332.1;Name=WP_000529332.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415625.1;locus_tag=AC56_RS16315;product=beta-N-acetylhexosaminidase;protein_id=WP_000529332.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	46355	46897	.	+	.	ID=gene-AC56_RS16310;Name=ycfP;gbkey=Gene;gene=ycfP;gene_biotype=protein_coding;locus_tag=AC56_RS16310;old_locus_tag=AC56_1211
NZ_JJLS01000147.1	Protein Homology	CDS	46355	46897	.	+	0	ID=cds-WP_000587933.1;Parent=gene-AC56_RS16310;Dbxref=GenBank:WP_000587933.1;Name=WP_000587933.1;gbkey=CDS;gene=ycfP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126033.1;locus_tag=AC56_RS16310;product=alpha/beta hydrolase YcfP;protein_id=WP_000587933.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	47305	48609	.	+	.	ID=gene-AC56_RS16305;Name=ndh;gbkey=Gene;gene=ndh;gene_biotype=protein_coding;locus_tag=AC56_RS16305;old_locus_tag=AC56_1212
NZ_JJLS01000147.1	Protein Homology	CDS	47305	48609	.	+	0	ID=cds-WP_000211045.1;Parent=gene-AC56_RS16305;Dbxref=GenBank:WP_000211045.1;Name=WP_000211045.1;gbkey=CDS;gene=ndh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384716.1;locus_tag=AC56_RS16305;product=NADH-quinone dehydrogenase;protein_id=WP_000211045.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	48836	49375	.	+	.	ID=gene-AC56_RS16300;Name=AC56_RS16300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS16300;old_locus_tag=AC56_1213
NZ_JJLS01000147.1	Protein Homology	CDS	48836	49375	.	+	0	ID=cds-WP_001043459.1;Parent=gene-AC56_RS16300;Dbxref=GenBank:WP_001043459.1;Name=WP_001043459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415628.1;locus_tag=AC56_RS16300;product=glycine zipper 2TM domain-containing protein;protein_id=WP_001043459.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	49437	50069	.	-	.	ID=gene-AC56_RS16295;Name=comR;gbkey=Gene;gene=comR;gene_biotype=protein_coding;locus_tag=AC56_RS16295;old_locus_tag=AC56_1214
NZ_JJLS01000147.1	Protein Homology	CDS	49437	50069	.	-	0	ID=cds-WP_000179805.1;Parent=gene-AC56_RS16295;Dbxref=GenBank:WP_000179805.1;Name=WP_000179805.1;gbkey=CDS;gene=comR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415629.4;locus_tag=AC56_RS16295;product=TetR family copper-responsive transcriptional repressor ComR;protein_id=WP_000179805.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	50310	50567	.	+	.	ID=gene-AC56_RS16290;Name=bhsA;gbkey=Gene;gene=bhsA;gene_biotype=protein_coding;locus_tag=AC56_RS16290;old_locus_tag=AC56_1215
NZ_JJLS01000147.1	Protein Homology	CDS	50310	50567	.	+	0	ID=cds-WP_032278155.1;Parent=gene-AC56_RS16290;Dbxref=GenBank:WP_032278155.1;Name=WP_032278155.1;Ontology_term=GO:0006950,GO:0046688;gbkey=CDS;gene=bhsA;go_process=response to stress|0006950||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309517.1;locus_tag=AC56_RS16290;product=multiple stress resistance protein BhsA;protein_id=WP_032278155.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	50650	51612	.	-	.	ID=gene-AC56_RS16285;Name=ldtC;gbkey=Gene;gene=ldtC;gene_biotype=protein_coding;locus_tag=AC56_RS16285;old_locus_tag=AC56_1216
NZ_JJLS01000147.1	Protein Homology	CDS	50650	51612	.	-	0	ID=cds-WP_074577210.1;Parent=gene-AC56_RS16285;Dbxref=GenBank:WP_074577210.1;Name=WP_074577210.1;gbkey=CDS;gene=ldtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415631.1;locus_tag=AC56_RS16285;product=L%2CD-transpeptidase LdtC;protein_id=WP_074577210.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	51756	55202	.	-	.	ID=gene-AC56_RS16280;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=AC56_RS16280;old_locus_tag=AC56_1217
NZ_JJLS01000147.1	Protein Homology	CDS	51756	55202	.	-	0	ID=cds-WP_032278158.1;Parent=gene-AC56_RS16280;Dbxref=GenBank:WP_032278158.1;Name=WP_032278158.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415632.1;locus_tag=AC56_RS16280;product=transcription-repair coupling factor;protein_id=WP_032278158.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	55330	56403	.	-	.	ID=gene-AC56_RS16275;Name=AC56_RS16275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS16275;old_locus_tag=AC56_1218
NZ_JJLS01000147.1	Protein Homology	CDS	55330	56403	.	-	0	ID=cds-WP_000810275.1;Parent=gene-AC56_RS16275;Dbxref=GenBank:WP_000810275.1;Name=WP_000810275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415633.1;locus_tag=AC56_RS16275;product=acyltransferase family protein;protein_id=WP_000810275.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	56665	57864	.	+	.	ID=gene-AC56_RS16270;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=AC56_RS16270;old_locus_tag=AC56_1219
NZ_JJLS01000147.1	Protein Homology	CDS	56665	57864	.	+	0	ID=cds-WP_001543641.1;Parent=gene-AC56_RS16270;Dbxref=GenBank:WP_001543641.1;Name=WP_001543641.1;Ontology_term=GO:0042953,GO:0016020;gbkey=CDS;gene=lolC;go_component=membrane|0016020||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004976588.1;locus_tag=AC56_RS16270;product=lipoprotein-releasing ABC transporter permease subunit LolC;protein_id=WP_001543641.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	57857	58558	.	+	.	ID=gene-AC56_RS16265;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=AC56_RS16265;old_locus_tag=AC56_1220
NZ_JJLS01000147.1	Protein Homology	CDS	57857	58558	.	+	0	ID=cds-WP_001033694.1;Parent=gene-AC56_RS16265;Dbxref=GenBank:WP_001033694.1;Name=WP_001033694.1;Ontology_term=GO:0042953,GO:0005524,GO:0016020;gbkey=CDS;gene=lolD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415635.4;locus_tag=AC56_RS16265;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_001033694.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	58558	59802	.	+	.	ID=gene-AC56_RS16260;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=AC56_RS16260;old_locus_tag=AC56_1221
NZ_JJLS01000147.1	Protein Homology	CDS	58558	59802	.	+	0	ID=cds-WP_001251348.1;Parent=gene-AC56_RS16260;Dbxref=GenBank:WP_001251348.1;Name=WP_001251348.1;Ontology_term=GO:0042953;gbkey=CDS;gene=lolE;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415636.1;locus_tag=AC56_RS16260;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=WP_001251348.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	59831	60742	.	+	.	ID=gene-AC56_RS16255;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=protein_coding;locus_tag=AC56_RS16255;old_locus_tag=AC56_1222
NZ_JJLS01000147.1	Protein Homology	CDS	59831	60742	.	+	0	ID=cds-WP_000291270.1;Parent=gene-AC56_RS16255;Dbxref=GenBank:WP_000291270.1;Name=WP_000291270.1;Ontology_term=GO:0045127;gbkey=CDS;gene=nagK;go_function=N-acetylglucosamine kinase activity|0045127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415637.1;locus_tag=AC56_RS16255;product=N-acetylglucosamine kinase;protein_id=WP_000291270.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	60758	61597	.	+	.	ID=gene-AC56_RS16250;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=AC56_RS16250;old_locus_tag=AC56_1223
NZ_JJLS01000147.1	Protein Homology	CDS	60758	61597	.	+	0	ID=cds-WP_000952737.1;Parent=gene-AC56_RS16250;Dbxref=GenBank:WP_000952737.1;Name=WP_000952737.1;Ontology_term=GO:0070403;gbkey=CDS;gene=cobB;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415638.3;locus_tag=AC56_RS16250;product=Sir2 family NAD+-dependent deacetylase;protein_id=WP_000952737.1;transl_table=11
NZ_JJLS01000147.1	RefSeq	gene	61760	62340	.	+	.	ID=gene-AC56_RS16245;Name=AC56_RS16245;end_range=62340,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS16245;old_locus_tag=AC56_1225;partial=true
NZ_JJLS01000147.1	Protein Homology	CDS	61760	62340	.	+	0	ID=cds-WP_162752771.1;Parent=gene-AC56_RS16245;Dbxref=GenBank:WP_162752771.1;Name=WP_162752771.1;Ontology_term=GO:0004803;end_range=62340,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS16245;partial=true;product=IS5 family transposase;protein_id=WP_162752771.1;transl_table=11
##sequence-region NZ_JJLS01000148.1 1 18031
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000148.1	RefSeq	region	1	18031	.	+	.	ID=NZ_JJLS01000148.1:1..18031;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000148.1	RefSeq	pseudogene	1	437	.	+	.	ID=gene-AC56_RS16240;Name=AC56_RS16240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS16240;old_locus_tag=AC56_1226;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000148.1	Protein Homology	CDS	1	437	.	+	2	ID=cds-AC56_RS16240;Parent=gene-AC56_RS16240;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS16240;partial=true;product=IS5-like element IS903B family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000148.1	RefSeq	gene	479	1279	.	-	.	ID=gene-AC56_RS16235;Name=ycfZ;gbkey=Gene;gene=ycfZ;gene_biotype=protein_coding;locus_tag=AC56_RS16235;old_locus_tag=AC56_1227
NZ_JJLS01000148.1	Protein Homology	CDS	479	1279	.	-	0	ID=cds-WP_032278160.1;Parent=gene-AC56_RS16235;Dbxref=GenBank:WP_032278160.1;Name=WP_032278160.1;Ontology_term=GO:0016791;gbkey=CDS;gene=ycfZ;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415639.1;locus_tag=AC56_RS16235;product=TPM domain-containing protein;protein_id=WP_032278160.1;transl_table=11
NZ_JJLS01000148.1	RefSeq	gene	1276	1737	.	-	.	ID=gene-AC56_RS16230;Name=ymfA;gbkey=Gene;gene=ymfA;gene_biotype=protein_coding;locus_tag=AC56_RS16230;old_locus_tag=AC56_1228
NZ_JJLS01000148.1	Protein Homology	CDS	1276	1737	.	-	0	ID=cds-WP_000076376.1;Parent=gene-AC56_RS16230;Dbxref=GenBank:WP_000076376.1;Name=WP_000076376.1;gbkey=CDS;gene=ymfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415640.2;locus_tag=AC56_RS16230;product=DUF3592 domain-containing protein;protein_id=WP_000076376.1;transl_table=11
NZ_JJLS01000148.1	RefSeq	gene	1795	2841	.	-	.	ID=gene-AC56_RS16225;Name=potD;gbkey=Gene;gene=potD;gene_biotype=protein_coding;locus_tag=AC56_RS16225;old_locus_tag=AC56_1229
NZ_JJLS01000148.1	Protein Homology	CDS	1795	2841	.	-	0	ID=cds-WP_032278161.1;Parent=gene-AC56_RS16225;Dbxref=GenBank:WP_032278161.1;Name=WP_032278161.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potD;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121082.1;locus_tag=AC56_RS16225;product=spermidine/putrescine ABC transporter substrate-binding protein PotD;protein_id=WP_032278161.1;transl_table=11
NZ_JJLS01000148.1	RefSeq	gene	2838	3632	.	-	.	ID=gene-AC56_RS16220;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=AC56_RS16220;old_locus_tag=AC56_1230
NZ_JJLS01000148.1	Protein Homology	CDS	2838	3632	.	-	0	ID=cds-WP_000580316.1;Parent=gene-AC56_RS16220;Dbxref=GenBank:WP_000580316.1;Name=WP_000580316.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309527.1;locus_tag=AC56_RS16220;product=spermidine/putrescine ABC transporter permease PotC;protein_id=WP_000580316.1;transl_table=11
NZ_JJLS01000148.1	RefSeq	gene	3629	4486	.	-	.	ID=gene-AC56_RS16215;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=AC56_RS16215;old_locus_tag=AC56_1231
NZ_JJLS01000148.1	Protein Homology	CDS	3629	4486	.	-	0	ID=cds-WP_000799401.1;Parent=gene-AC56_RS16215;Dbxref=GenBank:WP_000799401.1;Name=WP_000799401.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000799378.1;locus_tag=AC56_RS16215;product=spermidine/putrescine ABC transporter permease PotB;protein_id=WP_000799401.1;transl_table=11
NZ_JJLS01000148.1	RefSeq	gene	4470	5606	.	-	.	ID=gene-AC56_RS16210;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=AC56_RS16210;old_locus_tag=AC56_1232
NZ_JJLS01000148.1	Protein Homology	CDS	4470	5606	.	-	0	ID=cds-WP_000531601.1;Parent=gene-AC56_RS16210;Dbxref=GenBank:WP_000531601.1;Name=WP_000531601.1;Ontology_term=GO:0015846,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=potA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309598.1;locus_tag=AC56_RS16210;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;protein_id=WP_000531601.1;transl_table=11
NZ_JJLS01000148.1	RefSeq	gene	5856	7082	.	+	.	ID=gene-AC56_RS16200;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=AC56_RS16200;old_locus_tag=AC56_1234
NZ_JJLS01000148.1	Protein Homology	CDS	5856	7082	.	+	0	ID=cds-WP_032282625.1;Parent=gene-AC56_RS16200;Dbxref=GenBank:WP_032282625.1;Name=WP_032282625.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309599.1;locus_tag=AC56_RS16200;product=peptidase T;protein_id=WP_032282625.1;transl_table=11
NZ_JJLS01000148.1	RefSeq	gene	7131	8252	.	-	.	ID=gene-AC56_RS16195;Name=roxA;gbkey=Gene;gene=roxA;gene_biotype=protein_coding;gene_synonym=ycfD;locus_tag=AC56_RS16195;old_locus_tag=AC56_1235
NZ_JJLS01000148.1	Protein Homology	CDS	7131	8252	.	-	0	ID=cds-WP_001295435.1;Parent=gene-AC56_RS16195;Dbxref=GenBank:WP_001295435.1;Name=WP_001295435.1;gbkey=CDS;gene=roxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309600.2;locus_tag=AC56_RS16195;product=[50S ribosomal protein L16]-arginine 3-hydroxylase;protein_id=WP_001295435.1;transl_table=11
NZ_JJLS01000148.1	RefSeq	gene	8328	9788	.	-	.	ID=gene-AC56_RS16190;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;locus_tag=AC56_RS16190;old_locus_tag=AC56_1236
NZ_JJLS01000148.1	Protein Homology	CDS	8328	9788	.	-	0	ID=cds-WP_000735409.1;Parent=gene-AC56_RS16190;Dbxref=GenBank:WP_000735409.1;Name=WP_000735409.1;Ontology_term=GO:0000160,GO:0000155,GO:0004673,GO:0016772;gbkey=CDS;gene=phoQ;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415647.1;locus_tag=AC56_RS16190;product=two-component system sensor histidine kinase PhoQ;protein_id=WP_000735409.1;transl_table=11
NZ_JJLS01000148.1	RefSeq	gene	9788	10459	.	-	.	ID=gene-AC56_RS16185;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=AC56_RS16185;old_locus_tag=AC56_1237
NZ_JJLS01000148.1	Protein Homology	CDS	9788	10459	.	-	0	ID=cds-WP_001265471.1;Parent=gene-AC56_RS16185;Dbxref=GenBank:WP_001265471.1;Name=WP_001265471.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415648.1;locus_tag=AC56_RS16185;product=two-component system response regulator PhoP;protein_id=WP_001265471.1;transl_table=11
NZ_JJLS01000148.1	RefSeq	gene	10628	11998	.	-	.	ID=gene-AC56_RS16180;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=AC56_RS16180;old_locus_tag=AC56_1238
NZ_JJLS01000148.1	Protein Homology	CDS	10628	11998	.	-	0	ID=cds-WP_032278163.1;Parent=gene-AC56_RS16180;Dbxref=GenBank:WP_032278163.1;Name=WP_032278163.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950897.1;locus_tag=AC56_RS16180;product=adenylosuccinate lyase;protein_id=WP_032278163.1;transl_table=11
NZ_JJLS01000148.1	RefSeq	gene	12002	12643	.	-	.	ID=gene-AC56_RS16175;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=AC56_RS16175;old_locus_tag=AC56_1239
NZ_JJLS01000148.1	Protein Homology	CDS	12002	12643	.	-	0	ID=cds-WP_001297479.1;Parent=gene-AC56_RS16175;Dbxref=GenBank:WP_001297479.1;Name=WP_001297479.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415650.1;locus_tag=AC56_RS16175;product=high frequency lysogenization protein HflD;protein_id=WP_001297479.1;transl_table=11
NZ_JJLS01000148.1	RefSeq	gene	12679	13785	.	-	.	ID=gene-AC56_RS16170;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;gene_synonym=trmU;locus_tag=AC56_RS16170;old_locus_tag=AC56_1240
NZ_JJLS01000148.1	Protein Homology	CDS	12679	13785	.	-	0	ID=cds-WP_032278164.1;Parent=gene-AC56_RS16170;Dbxref=GenBank:WP_032278164.1;Name=WP_032278164.1;Ontology_term=GO:0002143,GO:0006396,GO:0004808,GO:0016783,GO:0005737;gbkey=CDS;gene=mnmA;go_component=cytoplasm|0005737||IEA;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415651.4;locus_tag=AC56_RS16170;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_032278164.1;transl_table=11
NZ_JJLS01000148.1	RefSeq	gene	13839	14300	.	-	.	ID=gene-AC56_RS16165;Name=nudJ;gbkey=Gene;gene=nudJ;gene_biotype=protein_coding;locus_tag=AC56_RS16165;old_locus_tag=AC56_1241
NZ_JJLS01000148.1	Protein Homology	CDS	13839	14300	.	-	0	ID=cds-WP_000476093.1;Parent=gene-AC56_RS16165;Dbxref=GenBank:WP_000476093.1;Name=WP_000476093.1;gbkey=CDS;gene=nudJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309633.1;locus_tag=AC56_RS16165;product=phosphatase NudJ;protein_id=WP_000476093.1;transl_table=11
NZ_JJLS01000148.1	RefSeq	gene	14310	14963	.	-	.	ID=gene-AC56_RS16160;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=protein_coding;locus_tag=AC56_RS16160;old_locus_tag=AC56_1242
NZ_JJLS01000148.1	Protein Homology	CDS	14310	14963	.	-	0	ID=cds-WP_001248691.1;Parent=gene-AC56_RS16160;Dbxref=GenBank:WP_001248691.1;Name=WP_001248691.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=rluE;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415653.4;locus_tag=AC56_RS16160;product=23S rRNA pseudouridine(2457) synthase RluE;protein_id=WP_001248691.1;transl_table=11
NZ_JJLS01000148.1	RefSeq	gene	15135	16385	.	+	.	ID=gene-AC56_RS16155;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=AC56_RS16155;old_locus_tag=AC56_1243
NZ_JJLS01000148.1	Protein Homology	CDS	15135	16385	.	+	0	ID=cds-WP_000444488.1;Parent=gene-AC56_RS16155;Dbxref=GenBank:WP_000444488.1;Name=WP_000444488.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=AC56_RS16155;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_000444488.1;transl_table=11
NZ_JJLS01000148.1	RefSeq	gene	16488	16811	.	-	.	ID=gene-AC56_RS0125570;Name=iraM;gbkey=Gene;gene=iraM;gene_biotype=protein_coding;locus_tag=AC56_RS0125570
NZ_JJLS01000148.1	Protein Homology	CDS	16488	16811	.	-	0	ID=cds-WP_001295666.1;Parent=gene-AC56_RS0125570;Dbxref=GenBank:WP_001295666.1;Name=WP_001295666.1;Ontology_term=GO:0043856,GO:0005737;gbkey=CDS;gene=iraM;go_component=cytoplasm|0005737||IEA;go_function=anti-sigma factor antagonist activity|0043856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415678.1;locus_tag=AC56_RS0125570;product=anti-adapter protein IraM;protein_id=WP_001295666.1;transl_table=11
NZ_JJLS01000148.1	RefSeq	gene	17068	17112	.	-	.	ID=gene-AC56_RS32950;Name=AC56_RS32950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS32950
NZ_JJLS01000148.1	Protein Homology	CDS	17068	17112	.	-	0	ID=cds-WP_120795380.1;Parent=gene-AC56_RS32950;Dbxref=GenBank:WP_120795380.1;Name=WP_120795380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518766.1;locus_tag=AC56_RS32950;product=protein YmgK;protein_id=WP_120795380.1;transl_table=11
NZ_JJLS01000148.1	RefSeq	gene	17279	17976	.	-	.	ID=gene-AC56_RS16150;Name=AC56_RS16150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS16150;old_locus_tag=AC56_1244
NZ_JJLS01000148.1	Protein Homology	CDS	17727	17976	.	-	0	ID=cds-WP_103215986.1;Parent=gene-AC56_RS16150;Dbxref=GenBank:WP_103215986.1;Name=WP_103215986.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS16150;product=IS1-like element IS1A family transposase;protein_id=WP_103215986.1;transl_table=11
NZ_JJLS01000148.1	Protein Homology	CDS	17279	17727	.	-	2	ID=cds-WP_103215986.1;Parent=gene-AC56_RS16150;Dbxref=GenBank:WP_103215986.1;Name=WP_103215986.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS16150;product=IS1-like element IS1A family transposase;protein_id=WP_103215986.1;transl_table=11
##sequence-region NZ_JJLS01000149.1 1 3561
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000149.1	RefSeq	region	1	3561	.	+	.	ID=NZ_JJLS01000149.1:1..3561;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000149.1	RefSeq	pseudogene	1	386	.	-	.	ID=gene-AC56_RS29080;Name=AC56_RS29080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS29080;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000149.1	Protein Homology	CDS	1	386	.	-	0	ID=cds-AC56_RS29080;Parent=gene-AC56_RS29080;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS29080;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000149.1	RefSeq	gene	535	645	.	-	.	ID=gene-AC56_RS32685;Name=AC56_RS32685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS32685
NZ_JJLS01000149.1	Protein Homology	CDS	535	645	.	-	0	ID=cds-WP_032082692.1-2;Parent=gene-AC56_RS32685;Dbxref=GenBank:WP_032082692.1;Name=WP_032082692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518767.1;locus_tag=AC56_RS32685;product=hypothetical protein;protein_id=WP_032082692.1;transl_table=11
NZ_JJLS01000149.1	RefSeq	pseudogene	698	1102	.	-	.	ID=gene-AC56_RS16140;Name=ycgX;gbkey=Gene;gene=ycgX;gene_biotype=pseudogene;locus_tag=AC56_RS16140;old_locus_tag=AC56_1246;pseudo=true
NZ_JJLS01000149.1	Protein Homology	CDS	698	1102	.	-	0	ID=cds-AC56_RS16140;Parent=gene-AC56_RS16140;Note=internal stop;gbkey=CDS;gene=ycgX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415679.1;locus_tag=AC56_RS16140;product=DUF1398 domain-containing protein;pseudo=true;transl_table=11
NZ_JJLS01000149.1	RefSeq	gene	1323	2054	.	-	.	ID=gene-AC56_RS16135;Name=bluR;gbkey=Gene;gene=bluR;gene_biotype=protein_coding;locus_tag=AC56_RS16135;old_locus_tag=AC56_1247
NZ_JJLS01000149.1	Protein Homology	CDS	1323	2054	.	-	0	ID=cds-WP_000332303.1;Parent=gene-AC56_RS16135;Dbxref=GenBank:WP_000332303.1;Name=WP_000332303.1;gbkey=CDS;gene=bluR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415680.1;locus_tag=AC56_RS16135;product=DNA-binding transcriptional repressor BluR;protein_id=WP_000332303.1;transl_table=11
NZ_JJLS01000149.1	RefSeq	gene	2259	3164	.	-	.	ID=gene-AC56_RS0125580;Name=AC56_RS0125580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0125580
NZ_JJLS01000149.1	Protein Homology	CDS	2259	3164	.	-	0	ID=cds-WP_077756312.1;Parent=gene-AC56_RS0125580;Dbxref=GenBank:WP_077756312.1;Name=WP_077756312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016231073.1;locus_tag=AC56_RS0125580;product=cyclic diguanylate phosphodiesterase;protein_id=WP_077756312.1;transl_table=11
NZ_JJLS01000149.1	RefSeq	gene	3177	3561	.	-	.	ID=gene-AC56_RS16130;Name=AC56_RS16130;end_range=3561,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS16130;old_locus_tag=AC56_1249;partial=true
NZ_JJLS01000149.1	Protein Homology	CDS	3177	3561	.	-	1	ID=cds-WP_024206598.1-2;Parent=gene-AC56_RS16130;Dbxref=GenBank:WP_024206598.1;Name=WP_024206598.1;Ontology_term=GO:0004803;end_range=3561,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AC56_RS16130;partial=true;product=IS3 family transposase;protein_id=WP_024206598.1;transl_table=11
##sequence-region NZ_JJLS01000150.1 1 2417
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000150.1	RefSeq	region	1	2417	.	+	.	ID=NZ_JJLS01000150.1:1..2417;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000150.1	RefSeq	gene	1	400	.	-	.	ID=gene-AC56_RS16125;Name=AC56_RS16125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS16125;old_locus_tag=AC56_1250;partial=true;start_range=.,1
NZ_JJLS01000150.1	Protein Homology	CDS	1	400	.	-	0	ID=cds-WP_162752772.1;Parent=gene-AC56_RS16125;Dbxref=GenBank:WP_162752772.1;Name=WP_162752772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS16125;partial=true;product=transposase;protein_id=WP_162752772.1;start_range=.,1;transl_table=11
NZ_JJLS01000150.1	RefSeq	pseudogene	607	933	.	-	.	ID=gene-AC56_RS16115;Name=bluF;gbkey=Gene;gene=bluF;gene_biotype=pseudogene;locus_tag=AC56_RS16115;old_locus_tag=AC56_1252;partial=true;pseudo=true;start_range=.,607
NZ_JJLS01000150.1	Protein Homology	CDS	607	933	.	-	0	ID=cds-AC56_RS16115;Parent=gene-AC56_RS16115;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=bluF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415681.1;locus_tag=AC56_RS16115;partial=true;product=blue light-responsive regulator BluF;pseudo=true;start_range=.,607;transl_table=11
NZ_JJLS01000150.1	RefSeq	gene	1247	1483	.	+	.	ID=gene-AC56_RS0125585;Name=ycgZ;gbkey=Gene;gene=ycgZ;gene_biotype=protein_coding;locus_tag=AC56_RS0125585
NZ_JJLS01000150.1	Protein Homology	CDS	1247	1483	.	+	0	ID=cds-WP_000554153.1;Parent=gene-AC56_RS0125585;Dbxref=GenBank:WP_000554153.1;Name=WP_000554153.1;gbkey=CDS;gene=ycgZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415682.1;locus_tag=AC56_RS0125585;product=regulatory protein YcgZ;protein_id=WP_000554153.1;transl_table=11
NZ_JJLS01000150.1	RefSeq	gene	1526	1798	.	+	.	ID=gene-AC56_RS0125590;Name=ymgA;gbkey=Gene;gene=ymgA;gene_biotype=protein_coding;locus_tag=AC56_RS0125590
NZ_JJLS01000150.1	Protein Homology	CDS	1526	1798	.	+	0	ID=cds-WP_000858002.1;Parent=gene-AC56_RS0125590;Dbxref=GenBank:WP_000858002.1;Name=WP_000858002.1;gbkey=CDS;gene=ymgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415683.1;locus_tag=AC56_RS0125590;product=two-component-system connector protein YmgA;protein_id=WP_000858002.1;transl_table=11
NZ_JJLS01000150.1	RefSeq	pseudogene	1827	1907	.	+	.	ID=gene-AC56_RS32050;Name=ariR;end_range=1907,.;gbkey=Gene;gene=ariR;gene_biotype=pseudogene;gene_synonym=ymgB;locus_tag=AC56_RS32050;partial=true;pseudo=true
NZ_JJLS01000150.1	Protein Homology	CDS	1827	1907	.	+	0	ID=cds-AC56_RS32050;Parent=gene-AC56_RS32050;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1907,.;gbkey=CDS;gene=ariR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415684.1;locus_tag=AC56_RS32050;partial=true;product=biofilm/acid-resistance regulator AriR;pseudo=true;transl_table=11
NZ_JJLS01000150.1	RefSeq	pseudogene	1977	2417	.	+	.	ID=gene-AC56_RS16110;Name=AC56_RS16110;end_range=2417,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS16110;old_locus_tag=AC56_1253;partial=true;pseudo=true
NZ_JJLS01000150.1	Protein Homology	CDS	1977	2417	.	+	0	ID=cds-AC56_RS16110;Parent=gene-AC56_RS16110;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=2417,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS16110;partial=true;product=IS5-like element ISKpn26 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000151.1 1 1015
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000151.1	RefSeq	region	1	1015	.	+	.	ID=NZ_JJLS01000151.1:1..1015;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000151.1	RefSeq	gene	1	244	.	+	.	ID=gene-AC56_RS16105;Name=AC56_RS16105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS16105;old_locus_tag=AC56_1254;partial=true;start_range=.,1
NZ_JJLS01000151.1	Protein Homology	CDS	1	244	.	+	1	ID=cds-WP_032277609.1;Parent=gene-AC56_RS16105;Dbxref=GenBank:WP_032277609.1;Name=WP_032277609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS16105;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032277609.1;start_range=.,1;transl_table=11
NZ_JJLS01000151.1	RefSeq	gene	226	423	.	+	.	ID=gene-AC56_RS33715;Name=AC56_RS33715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33715
NZ_JJLS01000151.1	Protein Homology	CDS	226	423	.	+	0	ID=cds-WP_349237784.1;Parent=gene-AC56_RS33715;Dbxref=GenBank:WP_349237784.1;Name=WP_349237784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001340384.1;locus_tag=AC56_RS33715;product=hypothetical protein;protein_id=WP_349237784.1;transl_table=11
NZ_JJLS01000151.1	RefSeq	pseudogene	563	1015	.	-	.	ID=gene-AC56_RS16095;Name=AC56_RS16095;end_range=1015,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS16095;old_locus_tag=AC56_1256;partial=true;pseudo=true
NZ_JJLS01000151.1	Protein Homology	CDS	563	1015	.	-	0	ID=cds-AC56_RS16095;Parent=gene-AC56_RS16095;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=1015,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS16095;partial=true;product=IS5-like element IS903B family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000152.1 1 2156
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000152.1	RefSeq	region	1	2156	.	+	.	ID=NZ_JJLS01000152.1:1..2156;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000152.1	RefSeq	gene	1	531	.	-	.	ID=gene-AC56_RS16090;Name=AC56_RS16090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS16090;old_locus_tag=AC56_1257;partial=true;start_range=.,1
NZ_JJLS01000152.1	Protein Homology	CDS	1	531	.	-	0	ID=cds-WP_162752773.1;Parent=gene-AC56_RS16090;Dbxref=GenBank:WP_162752773.1;Name=WP_162752773.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS16090;partial=true;product=IS5 family transposase;protein_id=WP_162752773.1;start_range=.,1;transl_table=11
NZ_JJLS01000152.1	RefSeq	pseudogene	889	1812	.	+	.	ID=gene-AC56_RS16085;Name=ycgH;end_range=1812,.;gbkey=Gene;gene=ycgH;gene_biotype=pseudogene;locus_tag=AC56_RS16085;old_locus_tag=AC56_1259;partial=true;pseudo=true
NZ_JJLS01000152.1	Protein Homology	CDS	889	1812	.	+	0	ID=cds-AC56_RS16085;Parent=gene-AC56_RS16085;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1812,.;gbkey=CDS;gene=ycgH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000768545.1;locus_tag=AC56_RS16085;partial=true;product=autotransporter YcgH;pseudo=true;transl_table=11
NZ_JJLS01000152.1	RefSeq	gene	1853	2156	.	-	.	ID=gene-AC56_RS16080;Name=AC56_RS16080;end_range=2156,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS16080;old_locus_tag=AC56_1260;partial=true
NZ_JJLS01000152.1	Protein Homology	CDS	1853	2156	.	-	1	ID=cds-WP_071999473.1;Parent=gene-AC56_RS16080;Dbxref=GenBank:WP_071999473.1;Name=WP_071999473.1;end_range=2156,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS16080;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_071999473.1;transl_table=11
##sequence-region NZ_JJLS01000153.1 1 69090
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000153.1	RefSeq	region	1	69090	.	+	.	ID=NZ_JJLS01000153.1:1..69090;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000153.1	RefSeq	pseudogene	1	175	.	-	.	ID=gene-AC56_RS16075;Name=AC56_RS16075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS16075;old_locus_tag=AC56_1261;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000153.1	Protein Homology	CDS	1	175	.	-	0	ID=cds-AC56_RS16075;Parent=gene-AC56_RS16075;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS16075;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000153.1	RefSeq	pseudogene	206	1956	.	+	.	ID=gene-AC56_RS29100;Name=ycgH;gbkey=Gene;gene=ycgH;gene_biotype=pseudogene;locus_tag=AC56_RS29100;old_locus_tag=AC56_1263;partial=true;pseudo=true;start_range=.,206
NZ_JJLS01000153.1	Protein Homology	CDS	206	1956	.	+	0	ID=cds-AC56_RS29100;Parent=gene-AC56_RS29100;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=ycgH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000768545.1;locus_tag=AC56_RS29100;partial=true;product=autotransporter YcgH;pseudo=true;start_range=.,206;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	2013	2348	.	-	.	ID=gene-AC56_RS16065;Name=ymgD;gbkey=Gene;gene=ymgD;gene_biotype=protein_coding;locus_tag=AC56_RS16065;old_locus_tag=AC56_1264
NZ_JJLS01000153.1	Protein Homology	CDS	2013	2348	.	-	0	ID=cds-WP_000979977.1;Parent=gene-AC56_RS16065;Dbxref=GenBank:WP_000979977.1;Name=WP_000979977.1;gbkey=CDS;gene=ymgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707068.1;locus_tag=AC56_RS16065;product=YmgD family protein;protein_id=WP_000979977.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	2352	2696	.	-	.	ID=gene-AC56_RS16060;Name=ymgG;gbkey=Gene;gene=ymgG;gene_biotype=protein_coding;locus_tag=AC56_RS16060;old_locus_tag=AC56_1265
NZ_JJLS01000153.1	Protein Homology	CDS	2352	2696	.	-	0	ID=cds-WP_000726974.1;Parent=gene-AC56_RS16060;Dbxref=GenBank:WP_000726974.1;Name=WP_000726974.1;gbkey=CDS;gene=ymgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415690.5;locus_tag=AC56_RS16060;product=YMGG-like glycine zipper-containing protein;protein_id=WP_000726974.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	2698	2871	.	-	.	ID=gene-AC56_RS0125605;Name=ymgI;gbkey=Gene;gene=ymgI;gene_biotype=protein_coding;locus_tag=AC56_RS0125605
NZ_JJLS01000153.1	Protein Homology	CDS	2698	2871	.	-	0	ID=cds-WP_000122462.1;Parent=gene-AC56_RS0125605;Dbxref=GenBank:WP_000122462.1;Name=WP_000122462.1;gbkey=CDS;gene=ymgI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165314.1;locus_tag=AC56_RS0125605;product=protein YmgI;protein_id=WP_000122462.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	2972	3157	.	+	.	ID=gene-AC56_RS29105;Name=ymgJ;gbkey=Gene;gene=ymgJ;gene_biotype=protein_coding;locus_tag=AC56_RS29105
NZ_JJLS01000153.1	Protein Homology	CDS	2972	3157	.	+	0	ID=cds-WP_001325005.1;Parent=gene-AC56_RS29105;Dbxref=GenBank:WP_001325005.1;Name=WP_001325005.1;gbkey=CDS;gene=ymgJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165315.1;locus_tag=AC56_RS29105;product=protein YmgJ;protein_id=WP_001325005.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	3118	3237	.	+	.	ID=gene-AC56_RS32690;Name=AC56_RS32690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS32690;old_locus_tag=AC56_1266
NZ_JJLS01000153.1	Protein Homology	CDS	3118	3237	.	+	0	ID=cds-WP_001131446.1;Parent=gene-AC56_RS32690;Dbxref=GenBank:WP_001131446.1;Name=WP_001131446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001131457.1;locus_tag=AC56_RS32690;product=hypothetical protein;protein_id=WP_001131446.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	pseudogene	3272	3615	.	+	.	ID=gene-AC56_RS31155;Name=AC56_RS31155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS31155;partial=true;pseudo=true;start_range=.,3272
NZ_JJLS01000153.1	Protein Homology	CDS	3272	3615	.	+	0	ID=cds-AC56_RS31155;Parent=gene-AC56_RS31155;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311542.2;locus_tag=AC56_RS31155;partial=true;product=autotransporter outer membrane beta-barrel domain-containing protein;pseudo=true;start_range=.,3272;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	3987	4253	.	-	.	ID=gene-AC56_RS16050;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=AC56_RS16050;old_locus_tag=AC56_1268
NZ_JJLS01000153.1	Protein Homology	CDS	3987	4253	.	-	0	ID=cds-WP_001185665.1;Parent=gene-AC56_RS16050;Dbxref=GenBank:WP_001185665.1;Name=WP_001185665.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309695.1;locus_tag=AC56_RS16050;product=cell division topological specificity factor MinE;protein_id=WP_001185665.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	4257	5069	.	-	.	ID=gene-AC56_RS16045;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=AC56_RS16045;old_locus_tag=AC56_1269
NZ_JJLS01000153.1	Protein Homology	CDS	4257	5069	.	-	0	ID=cds-WP_000101055.1;Parent=gene-AC56_RS16045;Dbxref=GenBank:WP_000101055.1;Name=WP_000101055.1;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=AC56_RS16045;product=septum site-determining protein MinD;protein_id=WP_000101055.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	5093	5788	.	-	.	ID=gene-AC56_RS16040;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=AC56_RS16040;old_locus_tag=AC56_1270
NZ_JJLS01000153.1	Protein Homology	CDS	5093	5788	.	-	0	ID=cds-WP_001301105.1;Parent=gene-AC56_RS16040;Dbxref=GenBank:WP_001301105.1;Name=WP_001301105.1;Ontology_term=GO:0000918,GO:1901891,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA,regulation of cell septum assembly|1901891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415694.1;locus_tag=AC56_RS16040;product=septum site-determining protein MinC;protein_id=WP_001301105.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	6308	6676	.	+	.	ID=gene-AC56_RS16035;Name=ycgJ;gbkey=Gene;gene=ycgJ;gene_biotype=protein_coding;locus_tag=AC56_RS16035;old_locus_tag=AC56_1271
NZ_JJLS01000153.1	Protein Homology	CDS	6308	6676	.	+	0	ID=cds-WP_001056837.1;Parent=gene-AC56_RS16035;Dbxref=GenBank:WP_001056837.1;Name=WP_001056837.1;gbkey=CDS;gene=ycgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415695.1;locus_tag=AC56_RS16035;product=YcgJ family protein;protein_id=WP_001056837.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	6779	7180	.	-	.	ID=gene-AC56_RS16030;Name=pliG;gbkey=Gene;gene=pliG;gene_biotype=protein_coding;locus_tag=AC56_RS16030;old_locus_tag=AC56_1272
NZ_JJLS01000153.1	Protein Homology	CDS	6779	7180	.	-	0	ID=cds-WP_000695220.1;Parent=gene-AC56_RS16030;Dbxref=GenBank:WP_000695220.1;Name=WP_000695220.1;gbkey=CDS;gene=pliG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309699.1;locus_tag=AC56_RS16030;product=g-type lysoyme inhibitor PliG;protein_id=WP_000695220.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	7421	7714	.	+	.	ID=gene-AC56_RS16020;Name=AC56_RS16020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS16020;old_locus_tag=AC56_1274
NZ_JJLS01000153.1	Protein Homology	CDS	7421	7714	.	+	0	ID=cds-WP_001295992.1;Parent=gene-AC56_RS16020;Dbxref=GenBank:WP_001295992.1;Name=WP_001295992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309701.2;locus_tag=AC56_RS16020;product=YcgL domain-containing protein;protein_id=WP_001295992.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	7786	8445	.	+	.	ID=gene-AC56_RS16015;Name=ycgM;gbkey=Gene;gene=ycgM;gene_biotype=protein_coding;locus_tag=AC56_RS16015;old_locus_tag=AC56_1275
NZ_JJLS01000153.1	Protein Homology	CDS	7786	8445	.	+	0	ID=cds-WP_000284273.1;Parent=gene-AC56_RS16015;Dbxref=GenBank:WP_000284273.1;Name=WP_000284273.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ycgM;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309702.1;locus_tag=AC56_RS16015;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_000284273.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	8537	8983	.	+	.	ID=gene-AC56_RS16010;Name=ycgN;gbkey=Gene;gene=ycgN;gene_biotype=protein_coding;locus_tag=AC56_RS16010;old_locus_tag=AC56_1277
NZ_JJLS01000153.1	Protein Homology	CDS	8537	8983	.	+	0	ID=cds-WP_001306825.1;Parent=gene-AC56_RS16010;Dbxref=GenBank:WP_001306825.1;Name=WP_001306825.1;gbkey=CDS;gene=ycgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309703.5;locus_tag=AC56_RS16010;product=YcgN family cysteine cluster protein;protein_id=WP_001306825.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	9189	10100	.	-	.	ID=gene-AC56_RS16005;Name=hlyE;gbkey=Gene;gene=hlyE;gene_biotype=protein_coding;locus_tag=AC56_RS16005;old_locus_tag=AC56_1278
NZ_JJLS01000153.1	Protein Homology	CDS	9189	10100	.	-	0	ID=cds-WP_032278187.1;Parent=gene-AC56_RS16005;Dbxref=GenBank:WP_032278187.1;Name=WP_032278187.1;Ontology_term=GO:0044179,GO:0090729;gbkey=CDS;gene=hlyE;go_function=toxin activity|0090729||IEA;go_process=hemolysis in another organism|0044179||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415700.4;locus_tag=AC56_RS16005;product=hemolysin HlyE;protein_id=WP_032278187.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	10473	10892	.	+	.	ID=gene-AC56_RS16000;Name=umuD;gbkey=Gene;gene=umuD;gene_biotype=protein_coding;locus_tag=AC56_RS16000;old_locus_tag=AC56_1279
NZ_JJLS01000153.1	Protein Homology	CDS	10473	10892	.	+	0	ID=cds-WP_000897370.1;Parent=gene-AC56_RS16000;Dbxref=GenBank:WP_000897370.1;Name=WP_000897370.1;gbkey=CDS;gene=umuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309705.1;locus_tag=AC56_RS16000;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WP_000897370.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	10892	12160	.	+	.	ID=gene-AC56_RS15995;Name=umuC;gbkey=Gene;gene=umuC;gene_biotype=protein_coding;locus_tag=AC56_RS15995;old_locus_tag=AC56_1280
NZ_JJLS01000153.1	Protein Homology	CDS	10892	12160	.	+	0	ID=cds-WP_000457616.1;Parent=gene-AC56_RS15995;Dbxref=GenBank:WP_000457616.1;Name=WP_000457616.1;gbkey=CDS;gene=umuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415702.1;locus_tag=AC56_RS15995;product=DNA polymerase V catalytic protein;protein_id=WP_000457616.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	12206	12736	.	-	.	ID=gene-AC56_RS15990;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=AC56_RS15990;old_locus_tag=AC56_1281
NZ_JJLS01000153.1	Protein Homology	CDS	12206	12736	.	-	0	ID=cds-WP_000943459.1;Parent=gene-AC56_RS15990;Dbxref=GenBank:WP_000943459.1;Name=WP_000943459.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;gene=dsbB;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309707.1;locus_tag=AC56_RS15990;product=disulfide bond formation protein DsbB;protein_id=WP_000943459.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	12882	14423	.	-	.	ID=gene-AC56_RS15985;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=AC56_RS15985;old_locus_tag=AC56_1282
NZ_JJLS01000153.1	Protein Homology	CDS	12882	14423	.	-	0	ID=cds-WP_000406391.1;Parent=gene-AC56_RS15985;Dbxref=GenBank:WP_000406391.1;Name=WP_000406391.1;Ontology_term=GO:0006814,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaB;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309708.1;locus_tag=AC56_RS15985;product=Na(+)/H(+) antiporter NhaB;protein_id=WP_000406391.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	14644	15363	.	+	.	ID=gene-AC56_RS15980;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=AC56_RS15980;old_locus_tag=AC56_1283
NZ_JJLS01000153.1	Protein Homology	CDS	14644	15363	.	+	0	ID=cds-WP_000234823.1;Parent=gene-AC56_RS15980;Dbxref=GenBank:WP_000234823.1;Name=WP_000234823.1;Ontology_term=GO:0006355,GO:0019217,GO:0000062,GO:0003677,GO:0003700;gbkey=CDS;gene=fadR;go_function=fatty-acyl-CoA binding|0000062||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of fatty acid metabolic process|0019217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309709.1;locus_tag=AC56_RS15980;product=fatty acid metabolism transcriptional regulator FadR;protein_id=WP_000234823.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	15415	16947	.	-	.	ID=gene-AC56_RS15975;Name=ycgB;gbkey=Gene;gene=ycgB;gene_biotype=protein_coding;locus_tag=AC56_RS15975;old_locus_tag=AC56_1284
NZ_JJLS01000153.1	Protein Homology	CDS	15415	16947	.	-	0	ID=cds-WP_000190854.1;Parent=gene-AC56_RS15975;Dbxref=GenBank:WP_000190854.1;Name=WP_000190854.1;gbkey=CDS;gene=ycgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415706.1;locus_tag=AC56_RS15975;product=SpoVR family protein;protein_id=WP_000190854.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	17277	18575	.	+	.	ID=gene-AC56_RS15970;Name=dadA;gbkey=Gene;gene=dadA;gene_biotype=protein_coding;locus_tag=AC56_RS15970;old_locus_tag=AC56_1285
NZ_JJLS01000153.1	Protein Homology	CDS	17277	18575	.	+	0	ID=cds-WP_001266908.1;Parent=gene-AC56_RS15970;Dbxref=GenBank:WP_001266908.1;Name=WP_001266908.1;gbkey=CDS;gene=dadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309711.1;locus_tag=AC56_RS15970;product=D-amino acid dehydrogenase;protein_id=WP_001266908.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	18585	19655	.	+	.	ID=gene-AC56_RS15965;Name=dadX;gbkey=Gene;gene=dadX;gene_biotype=protein_coding;locus_tag=AC56_RS15965;old_locus_tag=AC56_1286
NZ_JJLS01000153.1	Protein Homology	CDS	18585	19655	.	+	0	ID=cds-WP_032278179.1;Parent=gene-AC56_RS15965;Dbxref=GenBank:WP_032278179.1;Name=WP_032278179.1;Ontology_term=GO:0006522,GO:0008784;gbkey=CDS;gene=dadX;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415708.1;locus_tag=AC56_RS15965;product=catabolic alanine racemase DadX;protein_id=WP_032278179.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	19779	19907	.	+	.	ID=gene-AC56_RS33555;Name=AC56_RS33555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33555;old_locus_tag=AC56_1287
NZ_JJLS01000153.1	GeneMarkS-2+	CDS	19779	19907	.	+	0	ID=cds-WP_282953771.1;Parent=gene-AC56_RS33555;Dbxref=GenBank:WP_282953771.1;Name=WP_282953771.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS33555;product=hypothetical protein;protein_id=WP_282953771.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	pseudogene	19966	20106	.	+	.	ID=gene-AC56_RS33915;Name=AC56_RS33915;end_range=20106,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33915;partial=true;pseudo=true
NZ_JJLS01000153.1	Protein Homology	CDS	19966	20106	.	+	0	ID=cds-AC56_RS33915;Parent=gene-AC56_RS33915;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=20106,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049075.1;locus_tag=AC56_RS33915;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	20041	21777	.	-	.	ID=gene-AC56_RS15960;Name=cvrA;gbkey=Gene;gene=cvrA;gene_biotype=protein_coding;locus_tag=AC56_RS15960;old_locus_tag=AC56_1288
NZ_JJLS01000153.1	Protein Homology	CDS	20041	21777	.	-	0	ID=cds-WP_000340194.1;Parent=gene-AC56_RS15960;Dbxref=GenBank:WP_000340194.1;Name=WP_000340194.1;Ontology_term=GO:0006813,GO:0006884,GO:0055085,GO:0051139,GO:0016020;gbkey=CDS;gene=cvrA;go_component=membrane|0016020||IEA;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA,cell volume homeostasis|0006884||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415709.2;locus_tag=AC56_RS15960;product=potassium/proton antiporter;protein_id=WP_000340194.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	21872	22786	.	-	.	ID=gene-AC56_RS15955;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=AC56_RS15955;old_locus_tag=AC56_1289
NZ_JJLS01000153.1	Protein Homology	CDS	21872	22786	.	-	0	ID=cds-WP_000051560.1;Parent=gene-AC56_RS15955;Dbxref=GenBank:WP_000051560.1;Name=WP_000051560.1;gbkey=CDS;gene=ldcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415710.1;locus_tag=AC56_RS15955;product=muramoyltetrapeptide carboxypeptidase;protein_id=WP_000051560.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	22886	23497	.	+	.	ID=gene-AC56_RS15950;Name=emtA;gbkey=Gene;gene=emtA;gene_biotype=protein_coding;locus_tag=AC56_RS15950;old_locus_tag=AC56_1290
NZ_JJLS01000153.1	Protein Homology	CDS	22886	23497	.	+	0	ID=cds-WP_001301104.1;Parent=gene-AC56_RS15950;Dbxref=GenBank:WP_001301104.1;Name=WP_001301104.1;gbkey=CDS;gene=emtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415711.2;locus_tag=AC56_RS15950;product=membrane-bound lytic murein transglycosylase EmtA;protein_id=WP_001301104.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	23499	24233	.	-	.	ID=gene-AC56_RS15945;Name=ycgR;gbkey=Gene;gene=ycgR;gene_biotype=protein_coding;locus_tag=AC56_RS15945;old_locus_tag=AC56_1291
NZ_JJLS01000153.1	Protein Homology	CDS	23499	24233	.	-	0	ID=cds-WP_000020169.1;Parent=gene-AC56_RS15945;Dbxref=GenBank:WP_000020169.1;Name=WP_000020169.1;Ontology_term=GO:0071945,GO:0035438;gbkey=CDS;gene=ycgR;go_function=cyclic-di-GMP binding|0035438||IEA;go_process=regulation of bacterial-type flagellum-dependent cell motility by regulation of motor speed|0071945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415712.1;locus_tag=AC56_RS15945;product=flagellar brake protein YcgR;protein_id=WP_000020169.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	24434	24688	.	+	.	ID=gene-AC56_RS15940;Name=ymgE;gbkey=Gene;gene=ymgE;gene_biotype=protein_coding;locus_tag=AC56_RS15940;old_locus_tag=AC56_1292
NZ_JJLS01000153.1	Protein Homology	CDS	24434	24688	.	+	0	ID=cds-WP_032278180.1;Parent=gene-AC56_RS15940;Dbxref=GenBank:WP_032278180.1;Name=WP_032278180.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ymgE;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415713.1;locus_tag=AC56_RS15940;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_032278180.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	24866	25306	.	+	.	ID=gene-AC56_RS15935;Name=ycgY;gbkey=Gene;gene=ycgY;gene_biotype=protein_coding;locus_tag=AC56_RS15935;old_locus_tag=AC56_1293
NZ_JJLS01000153.1	Protein Homology	CDS	24866	25306	.	+	0	ID=cds-WP_000615067.1;Parent=gene-AC56_RS15935;Dbxref=GenBank:WP_000615067.1;Name=WP_000615067.1;gbkey=CDS;gene=ycgY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415714.1;locus_tag=AC56_RS15935;product=protein YcgY;protein_id=WP_000615067.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	25385	27082	.	-	.	ID=gene-AC56_RS15930;Name=treA;gbkey=Gene;gene=treA;gene_biotype=protein_coding;locus_tag=AC56_RS15930;old_locus_tag=AC56_1294
NZ_JJLS01000153.1	Protein Homology	CDS	25385	27082	.	-	0	ID=cds-WP_000841714.1;Parent=gene-AC56_RS15930;Dbxref=GenBank:WP_000841714.1;Name=WP_000841714.1;gbkey=CDS;gene=treA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415715.1;locus_tag=AC56_RS15930;product=alpha%2Calpha-trehalase;protein_id=WP_000841714.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	27402	28820	.	-	.	ID=gene-AC56_RS15925;Name=dhaM;gbkey=Gene;gene=dhaM;gene_biotype=protein_coding;locus_tag=AC56_RS15925;old_locus_tag=AC56_1296
NZ_JJLS01000153.1	Protein Homology	CDS	27402	28820	.	-	0	ID=cds-WP_001301101.1;Parent=gene-AC56_RS15925;Dbxref=GenBank:WP_001301101.1;Name=WP_001301101.1;Ontology_term=GO:0009401,GO:0016310,GO:0019563,GO:0047324,GO:0016020;gbkey=CDS;gene=dhaM;go_component=membrane|0016020||IEA;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA,glycerol catabolic process|0019563||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415716.4;locus_tag=AC56_RS15925;product=dihydroxyacetone kinase phosphoryl donor subunit DhaM;protein_id=WP_001301101.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	28831	29463	.	-	.	ID=gene-AC56_RS15920;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=protein_coding;locus_tag=AC56_RS15920;old_locus_tag=AC56_1297
NZ_JJLS01000153.1	Protein Homology	CDS	28831	29463	.	-	0	ID=cds-WP_016242051.1;Parent=gene-AC56_RS15920;Dbxref=GenBank:WP_016242051.1;Name=WP_016242051.1;Ontology_term=GO:0006071,GO:0047324;gbkey=CDS;gene=dhaL;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415717.1;locus_tag=AC56_RS15920;product=dihydroxyacetone kinase subunit DhaL;protein_id=WP_016242051.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	29474	30544	.	-	.	ID=gene-AC56_RS15915;Name=dhaK;gbkey=Gene;gene=dhaK;gene_biotype=protein_coding;locus_tag=AC56_RS15915;old_locus_tag=AC56_1298
NZ_JJLS01000153.1	Protein Homology	CDS	29474	30544	.	-	0	ID=cds-WP_000733715.1;Parent=gene-AC56_RS15915;Dbxref=GenBank:WP_000733715.1;Name=WP_000733715.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaK;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415718.6;locus_tag=AC56_RS15915;product=dihydroxyacetone kinase subunit DhaK;protein_id=WP_000733715.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	30772	32691	.	+	.	ID=gene-AC56_RS15910;Name=dhaR;gbkey=Gene;gene=dhaR;gene_biotype=protein_coding;locus_tag=AC56_RS15910;old_locus_tag=AC56_1299
NZ_JJLS01000153.1	Protein Homology	CDS	30772	32691	.	+	0	ID=cds-WP_001295618.1;Parent=gene-AC56_RS15910;Dbxref=GenBank:WP_001295618.1;Name=WP_001295618.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=dhaR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415719.2;locus_tag=AC56_RS15910;product=dihydroxyacetone kinase operon transcriptional regulator DhaR;protein_id=WP_001295618.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	pseudogene	32791	35657	.	-	.	ID=gene-AC56_RS15905;Name=ycgV;gbkey=Gene;gene=ycgV;gene_biotype=pseudogene;locus_tag=AC56_RS15905;old_locus_tag=AC56_1300;pseudo=true
NZ_JJLS01000153.1	Protein Homology	CDS	32791	35657	.	-	0	ID=cds-AC56_RS15905;Parent=gene-AC56_RS15905;Note=frameshifted;Ontology_term=GO:0019867;gbkey=CDS;gene=ycgV;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415720.1;locus_tag=AC56_RS15905;product=autotransporter outer membrane beta-barrel domain-containing protein;pseudo=true;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	36427	37518	.	-	.	ID=gene-AC56_RS15895;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=AC56_RS15895;old_locus_tag=AC56_1302
NZ_JJLS01000153.1	Protein Homology	CDS	36427	37518	.	-	0	ID=cds-WP_000505866.1;Parent=gene-AC56_RS15895;Dbxref=GenBank:WP_000505866.1;Name=WP_000505866.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=AC56_RS15895;product=redox-regulated ATPase YchF;protein_id=WP_000505866.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	37635	38219	.	-	.	ID=gene-AC56_RS15890;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=AC56_RS15890;old_locus_tag=AC56_1303
NZ_JJLS01000153.1	Protein Homology	CDS	37635	38219	.	-	0	ID=cds-WP_000152933.1;Parent=gene-AC56_RS15890;Dbxref=GenBank:WP_000152933.1;Name=WP_000152933.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910438.1;locus_tag=AC56_RS15890;product=aminoacyl-tRNA hydrolase;protein_id=WP_000152933.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	38497	38775	.	+	.	ID=gene-AC56_RS15885;Name=ychH;gbkey=Gene;gene=ychH;gene_biotype=protein_coding;locus_tag=AC56_RS15885;old_locus_tag=AC56_1304
NZ_JJLS01000153.1	Protein Homology	CDS	38497	38775	.	+	0	ID=cds-WP_000823885.1;Parent=gene-AC56_RS15885;Dbxref=GenBank:WP_000823885.1;Name=WP_000823885.1;gbkey=CDS;gene=ychH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309737.1;locus_tag=AC56_RS15885;product=stress-induced protein YchH;protein_id=WP_000823885.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	38830	40509	.	-	.	ID=gene-AC56_RS15880;Name=dauA;gbkey=Gene;gene=dauA;gene_biotype=protein_coding;locus_tag=AC56_RS15880;old_locus_tag=AC56_1305
NZ_JJLS01000153.1	Protein Homology	CDS	38830	40509	.	-	0	ID=cds-WP_001033352.1;Parent=gene-AC56_RS15880;Dbxref=GenBank:WP_001033352.1;Name=WP_001033352.1;gbkey=CDS;gene=dauA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415724.2;locus_tag=AC56_RS15880;product=C4-dicarboxylic acid transporter DauA;protein_id=WP_001033352.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	40634	41581	.	-	.	ID=gene-AC56_RS15875;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=AC56_RS15875;old_locus_tag=AC56_1306
NZ_JJLS01000153.1	Protein Homology	CDS	40634	41581	.	-	0	ID=cds-WP_001298109.1;Parent=gene-AC56_RS15875;Dbxref=GenBank:WP_001298109.1;Name=WP_001298109.1;gbkey=CDS;gene=prs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1;locus_tag=AC56_RS15875;product=ribose-phosphate diphosphokinase;protein_id=WP_001298109.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	41732	42583	.	-	.	ID=gene-AC56_RS15870;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=AC56_RS15870;old_locus_tag=AC56_1307
NZ_JJLS01000153.1	Protein Homology	CDS	41732	42583	.	-	0	ID=cds-WP_001260323.1;Parent=gene-AC56_RS15870;Dbxref=GenBank:WP_001260323.1;Name=WP_001260323.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707117.1;locus_tag=AC56_RS15870;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_001260323.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	42583	43206	.	-	.	ID=gene-AC56_RS15865;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=AC56_RS15865;old_locus_tag=AC56_1308
NZ_JJLS01000153.1	Protein Homology	CDS	42583	43206	.	-	0	ID=cds-WP_001130692.1;Parent=gene-AC56_RS15865;Dbxref=GenBank:WP_001130692.1;Name=WP_001130692.1;Ontology_term=GO:0015031,GO:0009279;gbkey=CDS;gene=lolB;go_component=cell outer membrane|0009279||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309741.1;locus_tag=AC56_RS15865;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_001130692.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	43420	44676	.	+	.	ID=gene-AC56_RS15860;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=AC56_RS15860;old_locus_tag=AC56_1309
NZ_JJLS01000153.1	Protein Homology	CDS	43420	44676	.	+	0	ID=cds-WP_001295619.1;Parent=gene-AC56_RS15860;Dbxref=GenBank:WP_001295619.1;Name=WP_001295619.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041689438.1;locus_tag=AC56_RS15860;product=glutamyl-tRNA reductase;protein_id=WP_001295619.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	44718	45800	.	+	.	ID=gene-AC56_RS15855;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=AC56_RS15855;old_locus_tag=AC56_1310
NZ_JJLS01000153.1	Protein Homology	CDS	44718	45800	.	+	0	ID=cds-WP_000804726.1;Parent=gene-AC56_RS15855;Dbxref=GenBank:WP_000804726.1;Name=WP_000804726.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132158.1;locus_tag=AC56_RS15855;product=peptide chain release factor 1;protein_id=WP_000804726.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	45800	46633	.	+	.	ID=gene-AC56_RS15850;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=AC56_RS15850;old_locus_tag=AC56_1311
NZ_JJLS01000153.1	Protein Homology	CDS	45800	46633	.	+	0	ID=cds-WP_000456454.1;Parent=gene-AC56_RS15850;Dbxref=GenBank:WP_000456454.1;Name=WP_000456454.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309744.1;locus_tag=AC56_RS15850;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_000456454.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	46630	47022	.	+	.	ID=gene-AC56_RS15845;Name=sirB2;gbkey=Gene;gene=sirB2;gene_biotype=protein_coding;locus_tag=AC56_RS15845;old_locus_tag=AC56_1312
NZ_JJLS01000153.1	Protein Homology	CDS	46630	47022	.	+	0	ID=cds-WP_001409175.1;Parent=gene-AC56_RS15845;Dbxref=GenBank:WP_001409175.1;Name=WP_001409175.1;gbkey=CDS;gene=sirB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707122.1;locus_tag=AC56_RS15845;product=invasion regulator SirB2;protein_id=WP_001409175.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	47026	47835	.	+	.	ID=gene-AC56_RS15840;Name=sirB1;gbkey=Gene;gene=sirB1;gene_biotype=protein_coding;locus_tag=AC56_RS15840;old_locus_tag=AC56_1313
NZ_JJLS01000153.1	Protein Homology	CDS	47026	47835	.	+	0	ID=cds-WP_001257044.1;Parent=gene-AC56_RS15840;Dbxref=GenBank:WP_001257044.1;Name=WP_001257044.1;gbkey=CDS;gene=sirB1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309746.1;locus_tag=AC56_RS15840;product=invasion regulator SirB1;protein_id=WP_001257044.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	47871	48725	.	+	.	ID=gene-AC56_RS15835;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=AC56_RS15835;old_locus_tag=AC56_1314
NZ_JJLS01000153.1	Protein Homology	CDS	47871	48725	.	+	0	ID=cds-WP_000811065.1;Parent=gene-AC56_RS15835;Dbxref=GenBank:WP_000811065.1;Name=WP_000811065.1;Ontology_term=GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126202.1;locus_tag=AC56_RS15835;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_000811065.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	48872	48979	.	-	.	ID=gene-AC56_RS15830;Name=AC56_RS15830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS15830;old_locus_tag=AC56_1315
NZ_JJLS01000153.1	Protein Homology	CDS	48872	48979	.	-	0	ID=cds-WP_000170963.1;Parent=gene-AC56_RS15830;Dbxref=GenBank:WP_000170963.1;Name=WP_000170963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025298.1;locus_tag=AC56_RS15830;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_000170963.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	49407	49514	.	-	.	ID=gene-AC56_RS15825;Name=AC56_RS15825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS15825;old_locus_tag=AC56_1316
NZ_JJLS01000153.1	Protein Homology	CDS	49407	49514	.	-	0	ID=cds-WP_000170963.1-2;Parent=gene-AC56_RS15825;Dbxref=GenBank:WP_000170963.1;Name=WP_000170963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025298.1;locus_tag=AC56_RS15825;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_000170963.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	49942	50049	.	-	.	ID=gene-AC56_RS15820;Name=AC56_RS15820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS15820;old_locus_tag=AC56_1317
NZ_JJLS01000153.1	Protein Homology	CDS	49942	50049	.	-	0	ID=cds-WP_000170965.1;Parent=gene-AC56_RS15820;Dbxref=GenBank:WP_000170965.1;Name=WP_000170965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025297.1;locus_tag=AC56_RS15820;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_000170965.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	50454	51554	.	-	.	ID=gene-AC56_RS15815;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=AC56_RS15815;old_locus_tag=AC56_1318
NZ_JJLS01000153.1	Protein Homology	CDS	50454	51554	.	-	0	ID=cds-WP_001563968.1;Parent=gene-AC56_RS15815;Dbxref=GenBank:WP_001563968.1;Name=WP_001563968.1;gbkey=CDS;gene=chaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309748.1;locus_tag=AC56_RS15815;product=sodium-potassium/proton antiporter ChaA;protein_id=WP_001563968.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	51824	52054	.	+	.	ID=gene-AC56_RS15810;Name=chaB;gbkey=Gene;gene=chaB;gene_biotype=protein_coding;locus_tag=AC56_RS15810;old_locus_tag=AC56_1319
NZ_JJLS01000153.1	Protein Homology	CDS	51824	52054	.	+	0	ID=cds-WP_001146444.1;Parent=gene-AC56_RS15810;Dbxref=GenBank:WP_001146444.1;Name=WP_001146444.1;gbkey=CDS;gene=chaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309749.1;locus_tag=AC56_RS15810;product=putative cation transport regulator ChaB;protein_id=WP_001146444.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	52212	52907	.	+	.	ID=gene-AC56_RS15805;Name=chaC;gbkey=Gene;gene=chaC;gene_biotype=protein_coding;locus_tag=AC56_RS15805;old_locus_tag=AC56_1320
NZ_JJLS01000153.1	Protein Homology	CDS	52212	52907	.	+	0	ID=cds-WP_001297117.1;Parent=gene-AC56_RS15805;Dbxref=GenBank:WP_001297117.1;Name=WP_001297117.1;gbkey=CDS;gene=chaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415736.2;locus_tag=AC56_RS15805;product=glutathione-specific gamma-glutamylcyclotransferase;protein_id=WP_001297117.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	52951	53304	.	-	.	ID=gene-AC56_RS15800;Name=ychN;gbkey=Gene;gene=ychN;gene_biotype=protein_coding;locus_tag=AC56_RS15800;old_locus_tag=AC56_1321
NZ_JJLS01000153.1	Protein Homology	CDS	52951	53304	.	-	0	ID=cds-WP_001169669.1;Parent=gene-AC56_RS15800;Dbxref=GenBank:WP_001169669.1;Name=WP_001169669.1;gbkey=CDS;gene=ychN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309751.1;locus_tag=AC56_RS15800;product=DsrE/F sulfur relay family protein YchN;protein_id=WP_001169669.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	53490	54884	.	+	.	ID=gene-AC56_RS15795;Name=ychO;gbkey=Gene;gene=ychO;gene_biotype=protein_coding;gene_synonym=iatA;locus_tag=AC56_RS15795;old_locus_tag=AC56_1322
NZ_JJLS01000153.1	Protein Homology	CDS	53490	54884	.	+	0	ID=cds-WP_001400233.1;Parent=gene-AC56_RS15795;Dbxref=GenBank:WP_001400233.1;Name=WP_001400233.1;gbkey=CDS;gene=ychO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415738.2;locus_tag=AC56_RS15795;product=inverse autotransporter invasin YchO;protein_id=WP_001400233.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	54885	55535	.	-	.	ID=gene-AC56_RS15790;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=AC56_RS15790;old_locus_tag=AC56_1323
NZ_JJLS01000153.1	Protein Homology	CDS	54885	55535	.	-	0	ID=cds-WP_000070491.1;Parent=gene-AC56_RS15790;Dbxref=GenBank:WP_000070491.1;Name=WP_000070491.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=narL;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309753.1;locus_tag=AC56_RS15790;product=two-component system response regulator NarL;protein_id=WP_000070491.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	55528	57324	.	-	.	ID=gene-AC56_RS15785;Name=narX;gbkey=Gene;gene=narX;gene_biotype=protein_coding;locus_tag=AC56_RS15785;old_locus_tag=AC56_1324
NZ_JJLS01000153.1	Protein Homology	CDS	55528	57324	.	-	0	ID=cds-WP_032278182.1;Parent=gene-AC56_RS15785;Dbxref=GenBank:WP_032278182.1;Name=WP_032278182.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narX;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309754.1;locus_tag=AC56_RS15785;product=nitrate/nitrite two-component system sensor histidine kinase NarX;protein_id=WP_032278182.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	57663	59054	.	+	.	ID=gene-AC56_RS15775;Name=narK;gbkey=Gene;gene=narK;gene_biotype=protein_coding;locus_tag=AC56_RS15775;old_locus_tag=AC56_1326
NZ_JJLS01000153.1	Protein Homology	CDS	57663	59054	.	+	0	ID=cds-WP_032278183.1;Parent=gene-AC56_RS15775;Dbxref=GenBank:WP_032278183.1;Name=WP_032278183.1;gbkey=CDS;gene=narK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415741.1;locus_tag=AC56_RS15775;product=nitrate transporter NarK;protein_id=WP_032278183.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	59570	63313	.	+	.	ID=gene-AC56_RS15770;Name=narG;gbkey=Gene;gene=narG;gene_biotype=protein_coding;locus_tag=AC56_RS15770;old_locus_tag=AC56_1327
NZ_JJLS01000153.1	Protein Homology	CDS	59570	63313	.	+	0	ID=cds-WP_000032935.1;Parent=gene-AC56_RS15770;Dbxref=GenBank:WP_000032935.1;Name=WP_000032935.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narG;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309756.1;locus_tag=AC56_RS15770;product=nitrate reductase subunit alpha;protein_id=WP_000032935.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	63310	64848	.	+	.	ID=gene-AC56_RS15765;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=AC56_RS15765;old_locus_tag=AC56_1328
NZ_JJLS01000153.1	Protein Homology	CDS	63310	64848	.	+	0	ID=cds-WP_000702660.1;Parent=gene-AC56_RS15765;Dbxref=GenBank:WP_000702660.1;Name=WP_000702660.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309757.1;locus_tag=AC56_RS15765;product=nitrate reductase subunit beta;protein_id=WP_000702660.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	64845	65555	.	+	.	ID=gene-AC56_RS15760;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=AC56_RS15760;old_locus_tag=AC56_1329
NZ_JJLS01000153.1	Protein Homology	CDS	64845	65555	.	+	0	ID=cds-WP_000571699.1;Parent=gene-AC56_RS15760;Dbxref=GenBank:WP_000571699.1;Name=WP_000571699.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707135.1;locus_tag=AC56_RS15760;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_000571699.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	65555	66232	.	+	.	ID=gene-AC56_RS15755;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=AC56_RS15755;old_locus_tag=AC56_1330
NZ_JJLS01000153.1	Protein Homology	CDS	65555	66232	.	+	0	ID=cds-WP_001160110.1;Parent=gene-AC56_RS15755;Dbxref=GenBank:WP_001160110.1;Name=WP_001160110.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309759.1;locus_tag=AC56_RS15755;product=respiratory nitrate reductase subunit gamma;protein_id=WP_001160110.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	66415	66546	.	-	.	ID=gene-AC56_RS27725;Name=AC56_RS27725;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AC56_RS27725
NZ_JJLS01000153.1	cmsearch	ncRNA	66415	66546	.	-	.	ID=rna-AC56_RS27725;Parent=gene-AC56_RS27725;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS27725;product=RtT sRNA
NZ_JJLS01000153.1	cmsearch	exon	66415	66546	.	-	.	ID=exon-AC56_RS27725-1;Parent=rna-AC56_RS27725;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS27725;product=RtT sRNA
NZ_JJLS01000153.1	RefSeq	gene	66594	66725	.	-	.	ID=gene-AC56_RS27730;Name=AC56_RS27730;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AC56_RS27730
NZ_JJLS01000153.1	cmsearch	ncRNA	66594	66725	.	-	.	ID=rna-AC56_RS27730;Parent=gene-AC56_RS27730;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS27730;product=RtT sRNA
NZ_JJLS01000153.1	cmsearch	exon	66594	66725	.	-	.	ID=exon-AC56_RS27730-1;Parent=rna-AC56_RS27730;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS27730;product=RtT sRNA
NZ_JJLS01000153.1	RefSeq	gene	66772	66903	.	-	.	ID=gene-AC56_RS27735;Name=AC56_RS27735;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AC56_RS27735
NZ_JJLS01000153.1	cmsearch	ncRNA	66772	66903	.	-	.	ID=rna-AC56_RS27735;Parent=gene-AC56_RS27735;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS27735;product=RtT sRNA
NZ_JJLS01000153.1	cmsearch	exon	66772	66903	.	-	.	ID=exon-AC56_RS27735-1;Parent=rna-AC56_RS27735;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS27735;product=RtT sRNA
NZ_JJLS01000153.1	RefSeq	gene	66950	67081	.	-	.	ID=gene-AC56_RS27740;Name=AC56_RS27740;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AC56_RS27740
NZ_JJLS01000153.1	cmsearch	ncRNA	66950	67081	.	-	.	ID=rna-AC56_RS27740;Parent=gene-AC56_RS27740;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS27740;product=RtT sRNA
NZ_JJLS01000153.1	cmsearch	exon	66950	67081	.	-	.	ID=exon-AC56_RS27740-1;Parent=rna-AC56_RS27740;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS27740;product=RtT sRNA
NZ_JJLS01000153.1	RefSeq	gene	67128	67212	.	-	.	ID=gene-AC56_RS15745;Name=AC56_RS15745;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS15745;old_locus_tag=AC56_1333
NZ_JJLS01000153.1	tRNAscan-SE	tRNA	67128	67212	.	-	.	ID=rna-AC56_RS15745;Parent=gene-AC56_RS15745;anticodon=(pos:complement(67176..67178));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS15745;product=tRNA-Tyr
NZ_JJLS01000153.1	tRNAscan-SE	exon	67128	67212	.	-	.	ID=exon-AC56_RS15745-1;Parent=rna-AC56_RS15745;anticodon=(pos:complement(67176..67178));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS15745;product=tRNA-Tyr
NZ_JJLS01000153.1	RefSeq	gene	67247	67378	.	-	.	ID=gene-AC56_RS27745;Name=AC56_RS27745;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AC56_RS27745
NZ_JJLS01000153.1	cmsearch	ncRNA	67247	67378	.	-	.	ID=rna-AC56_RS27745;Parent=gene-AC56_RS27745;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS27745;product=RtT sRNA
NZ_JJLS01000153.1	cmsearch	exon	67247	67378	.	-	.	ID=exon-AC56_RS27745-1;Parent=rna-AC56_RS27745;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS27745;product=RtT sRNA
NZ_JJLS01000153.1	RefSeq	gene	67422	67506	.	-	.	ID=gene-AC56_RS15740;Name=AC56_RS15740;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS15740;old_locus_tag=AC56_1334
NZ_JJLS01000153.1	tRNAscan-SE	tRNA	67422	67506	.	-	.	ID=rna-AC56_RS15740;Parent=gene-AC56_RS15740;anticodon=(pos:complement(67470..67472));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS15740;product=tRNA-Tyr
NZ_JJLS01000153.1	tRNAscan-SE	exon	67422	67506	.	-	.	ID=exon-AC56_RS15740-1;Parent=rna-AC56_RS15740;anticodon=(pos:complement(67470..67472));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS15740;product=tRNA-Tyr
NZ_JJLS01000153.1	RefSeq	gene	67666	68508	.	-	.	ID=gene-AC56_RS15735;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=AC56_RS15735;old_locus_tag=AC56_1335
NZ_JJLS01000153.1	Protein Homology	CDS	67666	68508	.	-	0	ID=cds-WP_000555849.1;Parent=gene-AC56_RS15735;Dbxref=GenBank:WP_000555849.1;Name=WP_000555849.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707138.1;locus_tag=AC56_RS15735;product=formyltetrahydrofolate deformylase;protein_id=WP_000555849.1;transl_table=11
NZ_JJLS01000153.1	RefSeq	gene	68558	69016	.	-	.	ID=gene-AC56_RS0125615;Name=AC56_RS0125615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0125615;old_locus_tag=AC56_1336
NZ_JJLS01000153.1	Protein Homology	CDS	68558	69016	.	-	0	ID=cds-WP_001362540.1;Parent=gene-AC56_RS0125615;Dbxref=GenBank:WP_001362540.1;Name=WP_001362540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309762.1;locus_tag=AC56_RS0125615;product=YchJ family protein;protein_id=WP_001362540.1;transl_table=11
##sequence-region NZ_JJLS01000154.1 1 73057
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000154.1	RefSeq	region	1	73057	.	+	.	ID=NZ_JJLS01000154.1:1..73057;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000154.1	RefSeq	gene	228	1070	.	-	.	ID=gene-AC56_RS15730;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=AC56_RS15730;old_locus_tag=AC56_1338
NZ_JJLS01000154.1	Protein Homology	CDS	228	1070	.	-	0	ID=cds-WP_000555849.1-2;Parent=gene-AC56_RS15730;Dbxref=GenBank:WP_000555849.1;Name=WP_000555849.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707138.1;locus_tag=AC56_RS15730;product=formyltetrahydrofolate deformylase;protein_id=WP_000555849.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	1120	1578	.	-	.	ID=gene-AC56_RS0125645;Name=ychJ;gbkey=Gene;gene=ychJ;gene_biotype=protein_coding;locus_tag=AC56_RS0125645;old_locus_tag=AC56_1339
NZ_JJLS01000154.1	Protein Homology	CDS	1120	1578	.	-	0	ID=cds-WP_001362540.1-2;Parent=gene-AC56_RS0125645;Dbxref=GenBank:WP_001362540.1;Name=WP_001362540.1;gbkey=CDS;gene=ychJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309762.1;locus_tag=AC56_RS0125645;product=YchJ family protein;protein_id=WP_001362540.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	1691	2596	.	+	.	ID=gene-AC56_RS15725;Name=rssA;gbkey=Gene;gene=rssA;gene_biotype=protein_coding;locus_tag=AC56_RS15725;old_locus_tag=AC56_1340
NZ_JJLS01000154.1	Protein Homology	CDS	1691	2596	.	+	0	ID=cds-WP_001295622.1;Parent=gene-AC56_RS15725;Dbxref=GenBank:WP_001295622.1;Name=WP_001295622.1;Ontology_term=GO:0006629,GO:0004622;gbkey=CDS;gene=rssA;go_function=lysophospholipase activity|0004622||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707140.2;locus_tag=AC56_RS15725;product=patatin-like phospholipase RssA;protein_id=WP_001295622.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	2688	3701	.	+	.	ID=gene-AC56_RS15720;Name=rssB;gbkey=Gene;gene=rssB;gene_biotype=protein_coding;locus_tag=AC56_RS15720;old_locus_tag=AC56_1341
NZ_JJLS01000154.1	Protein Homology	CDS	2688	3701	.	+	0	ID=cds-WP_000193447.1;Parent=gene-AC56_RS15720;Dbxref=GenBank:WP_000193447.1;Name=WP_000193447.1;Ontology_term=GO:0000160;gbkey=CDS;gene=rssB;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309764.1;locus_tag=AC56_RS15720;product=two-component system response regulator RssB;protein_id=WP_000193447.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	3903	4811	.	+	.	ID=gene-AC56_RS15715;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=AC56_RS15715;old_locus_tag=AC56_1342
NZ_JJLS01000154.1	Protein Homology	CDS	3903	4811	.	+	0	ID=cds-WP_000718995.1;Parent=gene-AC56_RS15715;Dbxref=GenBank:WP_000718995.1;Name=WP_000718995.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309765.1;locus_tag=AC56_RS15715;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_000718995.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	4955	5368	.	-	.	ID=gene-AC56_RS15710;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;locus_tag=AC56_RS15710;old_locus_tag=AC56_1343
NZ_JJLS01000154.1	Protein Homology	CDS	4955	5368	.	-	0	ID=cds-WP_001287378.1;Parent=gene-AC56_RS15710;Dbxref=GenBank:WP_001287378.1;Name=WP_001287378.1;Ontology_term=GO:0071824,GO:0003677;gbkey=CDS;gene=hns;go_function=DNA binding|0003677||IEA;go_process=protein-DNA complex organization|0071824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309766.1;locus_tag=AC56_RS15710;product=histone-like nucleoid-structuring protein H-NS;protein_id=WP_001287378.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	5972	6589	.	+	.	ID=gene-AC56_RS15705;Name=tdk;gbkey=Gene;gene=tdk;gene_biotype=protein_coding;locus_tag=AC56_RS15705;old_locus_tag=AC56_1345
NZ_JJLS01000154.1	Protein Homology	CDS	5972	6589	.	+	0	ID=cds-WP_032278882.1;Parent=gene-AC56_RS15705;Dbxref=GenBank:WP_032278882.1;Name=WP_032278882.1;gbkey=CDS;gene=tdk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309767.1;locus_tag=AC56_RS15705;product=thymidine kinase;protein_id=WP_032278882.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	6891	9566	.	-	.	ID=gene-AC56_RS15700;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=AC56_RS15700;old_locus_tag=AC56_1347
NZ_JJLS01000154.1	Protein Homology	CDS	6891	9566	.	-	0	ID=cds-WP_000301651.1;Parent=gene-AC56_RS15700;Dbxref=GenBank:WP_000301651.1;Name=WP_000301651.1;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309768.1;locus_tag=AC56_RS15700;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=WP_000301651.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	9959	10012	.	+	.	ID=gene-AC56_RS33250;Name=ychE;gbkey=Gene;gene=ychE;gene_biotype=protein_coding;locus_tag=AC56_RS33250
NZ_JJLS01000154.1	Protein Homology	CDS	9959	10012	.	+	0	ID=cds-WP_211180492.1;Parent=gene-AC56_RS33250;Dbxref=GenBank:WP_211180492.1;Name=WP_211180492.1;gbkey=CDS;gene=ychE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051181.1;locus_tag=AC56_RS33250;product=protein YchT;protein_id=WP_211180492.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	10043	10690	.	+	.	ID=gene-AC56_RS15695;Name=ychE;gbkey=Gene;gene=ychE;gene_biotype=protein_coding;locus_tag=AC56_RS15695;old_locus_tag=AC56_1348
NZ_JJLS01000154.1	Protein Homology	CDS	10043	10690	.	+	0	ID=cds-WP_000616773.1;Parent=gene-AC56_RS15695;Dbxref=GenBank:WP_000616773.1;Name=WP_000616773.1;gbkey=CDS;gene=ychE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309769.1;locus_tag=AC56_RS15695;product=NAAT family transporter YchE;protein_id=WP_000616773.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	10848	11009	.	-	.	ID=gene-AC56_RS32955;Name=AC56_RS32955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS32955;old_locus_tag=AC56_1349
NZ_JJLS01000154.1	GeneMarkS-2+	CDS	10848	11009	.	-	0	ID=cds-WP_000021850.1;Parent=gene-AC56_RS32955;Dbxref=GenBank:WP_000021850.1;Name=WP_000021850.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS32955;product=hypothetical protein;protein_id=WP_000021850.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	11428	13059	.	+	.	ID=gene-AC56_RS15690;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=AC56_RS15690;old_locus_tag=AC56_1350
NZ_JJLS01000154.1	Protein Homology	CDS	11428	13059	.	+	0	ID=cds-WP_001297114.1;Parent=gene-AC56_RS15690;Dbxref=GenBank:WP_001297114.1;Name=WP_001297114.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=oppA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707150.2;locus_tag=AC56_RS15690;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WP_001297114.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	13145	14065	.	+	.	ID=gene-AC56_RS15685;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=AC56_RS15685;old_locus_tag=AC56_1351
NZ_JJLS01000154.1	Protein Homology	CDS	13145	14065	.	+	0	ID=cds-WP_000911112.1;Parent=gene-AC56_RS15685;Dbxref=GenBank:WP_000911112.1;Name=WP_000911112.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=oppB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=AC56_RS15685;product=oligopeptide ABC transporter permease OppB;protein_id=WP_000911112.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	14080	14988	.	+	.	ID=gene-AC56_RS15680;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=AC56_RS15680;old_locus_tag=AC56_1352
NZ_JJLS01000154.1	Protein Homology	CDS	14080	14988	.	+	0	ID=cds-WP_000979661.1;Parent=gene-AC56_RS15680;Dbxref=GenBank:WP_000979661.1;Name=WP_000979661.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=AC56_RS15680;product=oligopeptide ABC transporter permease OppC;protein_id=WP_000979661.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	15000	16013	.	+	.	ID=gene-AC56_RS15675;Name=oppD;gbkey=Gene;gene=oppD;gene_biotype=protein_coding;locus_tag=AC56_RS15675;old_locus_tag=AC56_1353
NZ_JJLS01000154.1	Protein Homology	CDS	15000	16013	.	+	0	ID=cds-WP_000110945.1;Parent=gene-AC56_RS15675;Dbxref=GenBank:WP_000110945.1;Name=WP_000110945.1;gbkey=CDS;gene=oppD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309773.1;locus_tag=AC56_RS15675;product=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD;protein_id=WP_000110945.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	16010	17014	.	+	.	ID=gene-AC56_RS15670;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=AC56_RS15670;old_locus_tag=AC56_1354
NZ_JJLS01000154.1	Protein Homology	CDS	16010	17014	.	+	0	ID=cds-WP_000994905.1;Parent=gene-AC56_RS15670;Dbxref=GenBank:WP_000994905.1;Name=WP_000994905.1;gbkey=CDS;gene=oppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309774.1;locus_tag=AC56_RS15670;product=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF;protein_id=WP_000994905.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	17067	17396	.	-	.	ID=gene-AC56_RS15665;Name=yciU;gbkey=Gene;gene=yciU;gene_biotype=protein_coding;locus_tag=AC56_RS15665;old_locus_tag=AC56_1355
NZ_JJLS01000154.1	Protein Homology	CDS	17067	17396	.	-	0	ID=cds-WP_000366959.1;Parent=gene-AC56_RS15665;Dbxref=GenBank:WP_000366959.1;Name=WP_000366959.1;gbkey=CDS;gene=yciU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309775.2;locus_tag=AC56_RS15665;product=HI1450 family dsDNA-mimic protein;protein_id=WP_000366959.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	17431	18891	.	-	.	ID=gene-AC56_RS15660;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=AC56_RS15660;old_locus_tag=AC56_1356
NZ_JJLS01000154.1	Protein Homology	CDS	17431	18891	.	-	0	ID=cds-WP_000214516.1;Parent=gene-AC56_RS15660;Dbxref=GenBank:WP_000214516.1;Name=WP_000214516.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1;locus_tag=AC56_RS15660;product=cardiolipin synthase;protein_id=WP_000214516.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	19034	19207	.	+	.	ID=gene-AC56_RS32700;Name=yciY;gbkey=Gene;gene=yciY;gene_biotype=protein_coding;locus_tag=AC56_RS32700
NZ_JJLS01000154.1	Protein Homology	CDS	19034	19207	.	+	0	ID=cds-WP_001309467.1;Parent=gene-AC56_RS32700;Dbxref=GenBank:WP_001309467.1;Name=WP_001309467.1;gbkey=CDS;gene=yciY;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165316.1;locus_tag=AC56_RS32700;product=YciY family protein;protein_id=WP_001309467.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	19262	20515	.	-	.	ID=gene-AC56_RS15655;Name=kch;gbkey=Gene;gene=kch;gene_biotype=protein_coding;locus_tag=AC56_RS15655;old_locus_tag=AC56_1357
NZ_JJLS01000154.1	Protein Homology	CDS	19262	20515	.	-	0	ID=cds-WP_000020078.1;Parent=gene-AC56_RS15655;Dbxref=GenBank:WP_000020078.1;Name=WP_000020078.1;gbkey=CDS;gene=kch;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309777.1;locus_tag=AC56_RS15655;product=voltage-gated potassium channel protein;protein_id=WP_000020078.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	20815	21111	.	-	.	ID=gene-AC56_RS15650;Name=yciI;gbkey=Gene;gene=yciI;gene_biotype=protein_coding;locus_tag=AC56_RS15650;old_locus_tag=AC56_1358
NZ_JJLS01000154.1	Protein Homology	CDS	20815	21111	.	-	0	ID=cds-WP_032278886.1;Parent=gene-AC56_RS15650;Dbxref=GenBank:WP_032278886.1;Name=WP_032278886.1;gbkey=CDS;gene=yciI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415767.2;locus_tag=AC56_RS15650;product=YciI family protein;protein_id=WP_032278886.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	21335	22054	.	+	.	ID=gene-AC56_RS15645;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=AC56_RS15645;old_locus_tag=AC56_1359
NZ_JJLS01000154.1	Protein Homology	CDS	21335	22054	.	+	0	ID=cds-WP_001300409.1;Parent=gene-AC56_RS15645;Dbxref=GenBank:WP_001300409.1;Name=WP_001300409.1;gbkey=CDS;gene=tonB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415768.1;locus_tag=AC56_RS15645;product=TonB system transport protein TonB;protein_id=WP_001300409.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	22094	22492	.	-	.	ID=gene-AC56_RS15640;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;locus_tag=AC56_RS15640;old_locus_tag=AC56_1360
NZ_JJLS01000154.1	Protein Homology	CDS	22094	22492	.	-	0	ID=cds-WP_000108160.1;Parent=gene-AC56_RS15640;Dbxref=GenBank:WP_000108160.1;Name=WP_000108160.1;Ontology_term=GO:0016790;gbkey=CDS;gene=yciA;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415769.1;locus_tag=AC56_RS15640;product=acyl-CoA thioester hydrolase YciA;protein_id=WP_000108160.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	22597	23136	.	-	.	ID=gene-AC56_RS15635;Name=yciB;gbkey=Gene;gene=yciB;gene_biotype=protein_coding;locus_tag=AC56_RS15635;old_locus_tag=AC56_1361
NZ_JJLS01000154.1	Protein Homology	CDS	22597	23136	.	-	0	ID=cds-WP_000808667.1;Parent=gene-AC56_RS15635;Dbxref=GenBank:WP_000808667.1;Name=WP_000808667.1;gbkey=CDS;gene=yciB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309781.1;locus_tag=AC56_RS15635;product=septation protein A;protein_id=WP_000808667.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	23166	23909	.	-	.	ID=gene-AC56_RS15630;Name=yciC;gbkey=Gene;gene=yciC;gene_biotype=protein_coding;locus_tag=AC56_RS15630;old_locus_tag=AC56_1362
NZ_JJLS01000154.1	Protein Homology	CDS	23166	23909	.	-	0	ID=cds-WP_000028540.1;Parent=gene-AC56_RS15630;Dbxref=GenBank:WP_000028540.1;Name=WP_000028540.1;gbkey=CDS;gene=yciC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415771.1;locus_tag=AC56_RS15630;product=YciC family protein;protein_id=WP_000028540.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	pseudogene	23937	24026	.	-	.	ID=gene-AC56_RS32080;Name=AC56_RS32080;end_range=24026,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS32080;partial=true;pseudo=true
NZ_JJLS01000154.1	Protein Homology	CDS	23937	24026	.	-	0	ID=cds-AC56_RS32080;Parent=gene-AC56_RS32080;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=24026,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460692.1;locus_tag=AC56_RS32080;partial=true;product=YkgJ family cysteine cluster protein;pseudo=true;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	24235	24932	.	+	.	ID=gene-AC56_RS15625;Name=AC56_RS15625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS15625;old_locus_tag=AC56_1363
NZ_JJLS01000154.1	Protein Homology	CDS	24235	24484	.	+	0	ID=cds-WP_224223467.1-3;Parent=gene-AC56_RS15625;Dbxref=GenBank:WP_224223467.1;Name=WP_224223467.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS15625;product=IS1 family transposase;protein_id=WP_224223467.1;transl_table=11
NZ_JJLS01000154.1	Protein Homology	CDS	24484	24932	.	+	2	ID=cds-WP_224223467.1-3;Parent=gene-AC56_RS15625;Dbxref=GenBank:WP_224223467.1;Name=WP_224223467.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS15625;product=IS1 family transposase;protein_id=WP_224223467.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	25034	25186	.	-	.	ID=gene-AC56_RS15620;Name=AC56_RS15620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS15620;old_locus_tag=AC56_1364
NZ_JJLS01000154.1	Protein Homology	CDS	25034	25186	.	-	0	ID=cds-WP_000017552.1;Parent=gene-AC56_RS15620;Dbxref=GenBank:WP_000017552.1;Name=WP_000017552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439271.1;locus_tag=AC56_RS15620;product=hypothetical protein;protein_id=WP_000017552.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	25204	25395	.	+	.	ID=gene-AC56_RS15615;Name=yfgG;gbkey=Gene;gene=yfgG;gene_biotype=protein_coding;locus_tag=AC56_RS15615;old_locus_tag=AC56_1365
NZ_JJLS01000154.1	Protein Homology	CDS	25204	25395	.	+	0	ID=cds-WP_000076001.1;Parent=gene-AC56_RS15615;Dbxref=GenBank:WP_000076001.1;Name=WP_000076001.1;gbkey=CDS;gene=yfgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416999.1;locus_tag=AC56_RS15615;product=YfgG family protein;protein_id=WP_000076001.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	25706	26224	.	+	.	ID=gene-AC56_RS15610;Name=yfgH;gbkey=Gene;gene=yfgH;gene_biotype=protein_coding;locus_tag=AC56_RS15610;old_locus_tag=AC56_1366
NZ_JJLS01000154.1	Protein Homology	CDS	25706	26224	.	+	0	ID=cds-WP_001295476.1;Parent=gene-AC56_RS15610;Dbxref=GenBank:WP_001295476.1;Name=WP_001295476.1;Ontology_term=GO:0019867;gbkey=CDS;gene=yfgH;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417000.1;locus_tag=AC56_RS15610;product=glycine zipper 2TM domain-containing protein;protein_id=WP_001295476.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	26240	26779	.	+	.	ID=gene-AC56_RS15605;Name=yfgI;gbkey=Gene;gene=yfgI;gene_biotype=protein_coding;locus_tag=AC56_RS15605;old_locus_tag=AC56_1367
NZ_JJLS01000154.1	Protein Homology	CDS	26240	26779	.	+	0	ID=cds-WP_000755173.1;Parent=gene-AC56_RS15605;Dbxref=GenBank:WP_000755173.1;Name=WP_000755173.1;gbkey=CDS;gene=yfgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417001.1;locus_tag=AC56_RS15605;product=DUF5384 family protein;protein_id=WP_000755173.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	26872	28449	.	-	.	ID=gene-AC56_RS15600;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=AC56_RS15600;old_locus_tag=AC56_1368
NZ_JJLS01000154.1	Protein Homology	CDS	26872	28449	.	-	0	ID=cds-WP_000138282.1;Parent=gene-AC56_RS15600;Dbxref=GenBank:WP_000138282.1;Name=WP_000138282.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130181.1;locus_tag=AC56_RS15600;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_000138282.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	28518	29984	.	-	.	ID=gene-AC56_RS15595;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=AC56_RS15595;old_locus_tag=AC56_1369
NZ_JJLS01000154.1	Protein Homology	CDS	28518	29984	.	-	0	ID=cds-WP_001299507.1;Parent=gene-AC56_RS15595;Dbxref=GenBank:WP_001299507.1;Name=WP_001299507.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151980.1;locus_tag=AC56_RS15595;product=IMP dehydrogenase;protein_id=WP_001299507.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	30146	31516	.	+	.	ID=gene-AC56_RS15590;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=AC56_RS15590;old_locus_tag=AC56_1370
NZ_JJLS01000154.1	Protein Homology	CDS	30146	31516	.	+	0	ID=cds-WP_032278768.1;Parent=gene-AC56_RS15590;Dbxref=GenBank:WP_032278768.1;Name=WP_032278768.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417004.1;locus_tag=AC56_RS15590;product=exodeoxyribonuclease VII large subunit;protein_id=WP_032278768.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	31513	31728	.	-	.	ID=gene-AC56_RS15585;Name=yfgJ;gbkey=Gene;gene=yfgJ;gene_biotype=protein_coding;locus_tag=AC56_RS15585;old_locus_tag=AC56_1371
NZ_JJLS01000154.1	Protein Homology	CDS	31513	31728	.	-	0	ID=cds-WP_001300368.1;Parent=gene-AC56_RS15585;Dbxref=GenBank:WP_001300368.1;Name=WP_001300368.1;gbkey=CDS;gene=yfgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311399.1;locus_tag=AC56_RS15585;product=zinc ribbon domain-containing protein;protein_id=WP_001300368.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	31797	33269	.	-	.	ID=gene-AC56_RS15580;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=AC56_RS15580;old_locus_tag=AC56_1372
NZ_JJLS01000154.1	Protein Homology	CDS	31797	33269	.	-	0	ID=cds-WP_032278780.1;Parent=gene-AC56_RS15580;Dbxref=GenBank:WP_032278780.1;Name=WP_032278780.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417006.2;locus_tag=AC56_RS15580;product=ribosome biogenesis GTPase Der;protein_id=WP_032278780.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	33387	34565	.	-	.	ID=gene-AC56_RS15575;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=AC56_RS15575;old_locus_tag=AC56_1373
NZ_JJLS01000154.1	Protein Homology	CDS	33387	34565	.	-	0	ID=cds-WP_001177048.1;Parent=gene-AC56_RS15575;Dbxref=GenBank:WP_001177048.1;Name=WP_001177048.1;Ontology_term=GO:0005515;gbkey=CDS;gene=bamB;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311401.1;locus_tag=AC56_RS15575;product=outer membrane protein assembly factor BamB;protein_id=WP_001177048.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	34576	35196	.	-	.	ID=gene-AC56_RS15570;Name=yfgM;gbkey=Gene;gene=yfgM;gene_biotype=protein_coding;locus_tag=AC56_RS15570;old_locus_tag=AC56_1374
NZ_JJLS01000154.1	Protein Homology	CDS	34576	35196	.	-	0	ID=cds-WP_000409205.1;Parent=gene-AC56_RS15570;Dbxref=GenBank:WP_000409205.1;Name=WP_000409205.1;gbkey=CDS;gene=yfgM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417008.1;locus_tag=AC56_RS15570;product=ancillary SecYEG translocon subunit YfgM;protein_id=WP_000409205.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	35214	36488	.	-	.	ID=gene-AC56_RS15565;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=AC56_RS15565;old_locus_tag=AC56_1375
NZ_JJLS01000154.1	Protein Homology	CDS	35214	36488	.	-	0	ID=cds-WP_001107167.1;Parent=gene-AC56_RS15565;Dbxref=GenBank:WP_001107167.1;Name=WP_001107167.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311403.1;locus_tag=AC56_RS15565;product=histidine--tRNA ligase;protein_id=WP_001107167.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	36599	37717	.	-	.	ID=gene-AC56_RS15560;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=AC56_RS15560;old_locus_tag=AC56_1376
NZ_JJLS01000154.1	Protein Homology	CDS	36599	37717	.	-	0	ID=cds-WP_000551818.1;Parent=gene-AC56_RS15560;Dbxref=GenBank:WP_000551818.1;Name=WP_000551818.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311404.1;locus_tag=AC56_RS15560;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_000551818.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	37744	38757	.	-	.	ID=gene-AC56_RS15555;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;locus_tag=AC56_RS15555;old_locus_tag=AC56_1377
NZ_JJLS01000154.1	Protein Homology	CDS	37744	38757	.	-	0	ID=cds-WP_001090844.1;Parent=gene-AC56_RS15555;Dbxref=GenBank:WP_001090844.1;Name=WP_001090844.1;Ontology_term=GO:0008360,GO:0003677,GO:0016020;gbkey=CDS;gene=rodZ;go_component=membrane|0016020||IEA;go_function=DNA binding|0003677||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311405.1;locus_tag=AC56_RS15555;product=cytoskeleton protein RodZ;protein_id=WP_001090844.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	39042	40196	.	-	.	ID=gene-AC56_RS15550;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=AC56_RS15550;old_locus_tag=AC56_1378
NZ_JJLS01000154.1	Protein Homology	CDS	39042	40196	.	-	0	ID=cds-WP_000003317.1;Parent=gene-AC56_RS15550;Dbxref=GenBank:WP_000003317.1;Name=WP_000003317.1;gbkey=CDS;gene=rlmN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417012.1;locus_tag=AC56_RS15550;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;protein_id=WP_000003317.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	40346	40777	.	-	.	ID=gene-AC56_RS15545;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=AC56_RS15545;old_locus_tag=AC56_1379
NZ_JJLS01000154.1	Protein Homology	CDS	40346	40777	.	-	0	ID=cds-WP_000963837.1;Parent=gene-AC56_RS15545;Dbxref=GenBank:WP_000963837.1;Name=WP_000963837.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311407.1;locus_tag=AC56_RS15545;product=nucleoside-diphosphate kinase;protein_id=WP_000963837.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	40926	43238	.	-	.	ID=gene-AC56_RS15540;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=AC56_RS15540;old_locus_tag=AC56_1380
NZ_JJLS01000154.1	Protein Homology	CDS	40926	43238	.	-	0	ID=cds-WP_032278769.1;Parent=gene-AC56_RS15540;Dbxref=GenBank:WP_032278769.1;Name=WP_032278769.1;Note=penicillin-binding protein 1C;Ontology_term=GO:0009252,GO:0008658,GO:0008955;gbkey=CDS;gene=pbpC;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417014.1;locus_tag=AC56_RS15540;product=peptidoglycan glycosyltransferase PbpC;protein_id=WP_032278769.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	43239	48200	.	-	.	ID=gene-AC56_RS15535;Name=yfhM;gbkey=Gene;gene=yfhM;gene_biotype=protein_coding;locus_tag=AC56_RS15535;old_locus_tag=AC56_1381
NZ_JJLS01000154.1	Protein Homology	CDS	43239	48200	.	-	0	ID=cds-WP_000736312.1;Parent=gene-AC56_RS15535;Dbxref=GenBank:WP_000736312.1;Name=WP_000736312.1;gbkey=CDS;gene=yfhM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417015.1;locus_tag=AC56_RS15535;product=alpha2-macroglobulin;protein_id=WP_000736312.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	48407	49252	.	+	.	ID=gene-AC56_RS15530;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=AC56_RS15530;old_locus_tag=AC56_1382
NZ_JJLS01000154.1	Protein Homology	CDS	48407	49252	.	+	0	ID=cds-WP_000108637.1;Parent=gene-AC56_RS15530;Dbxref=GenBank:WP_000108637.1;Name=WP_000108637.1;Ontology_term=GO:0004792;gbkey=CDS;gene=sseA;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417016.4;locus_tag=AC56_RS15530;product=3-mercaptopyruvate sulfurtransferase;protein_id=WP_000108637.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	49592	49717	.	+	.	ID=gene-AC56_RS33255;Name=timP;gbkey=Gene;gene=timP;gene_biotype=protein_coding;locus_tag=AC56_RS33255
NZ_JJLS01000154.1	Protein Homology	CDS	49592	49717	.	+	0	ID=cds-WP_001380605.1;Parent=gene-AC56_RS33255;Dbxref=GenBank:WP_001380605.1;Name=WP_001380605.1;gbkey=CDS;gene=timP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010283914.1;locus_tag=AC56_RS33255;product=small toxic inner membrane protein TimP;protein_id=WP_001380605.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	49748	50524	.	-	.	ID=gene-AC56_RS15525;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=AC56_RS15525;old_locus_tag=AC56_1383
NZ_JJLS01000154.1	Protein Homology	CDS	49748	50524	.	-	0	ID=cds-WP_032278770.1;Parent=gene-AC56_RS15525;Dbxref=GenBank:WP_032278770.1;Name=WP_032278770.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708361.2;locus_tag=AC56_RS15525;product=enhanced serine sensitivity protein SseB;protein_id=WP_032278770.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	50666	51949	.	-	.	ID=gene-AC56_RS15520;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=AC56_RS15520;old_locus_tag=AC56_1384
NZ_JJLS01000154.1	Protein Homology	CDS	50666	51949	.	-	0	ID=cds-WP_000133591.1;Parent=gene-AC56_RS15520;Dbxref=GenBank:WP_000133591.1;Name=WP_000133591.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417018.4;locus_tag=AC56_RS15520;product=aminopeptidase PepB;protein_id=WP_000133591.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	52008	52208	.	-	.	ID=gene-AC56_RS15515;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=AC56_RS15515;old_locus_tag=AC56_1385
NZ_JJLS01000154.1	Protein Homology	CDS	52008	52208	.	-	0	ID=cds-WP_000523616.1;Parent=gene-AC56_RS15515;Dbxref=GenBank:WP_000523616.1;Name=WP_000523616.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104502.1;locus_tag=AC56_RS15515;product=Fe-S cluster assembly protein IscX;protein_id=WP_000523616.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	52220	52555	.	-	.	ID=gene-AC56_RS15510;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=AC56_RS15510;old_locus_tag=AC56_1386
NZ_JJLS01000154.1	Protein Homology	CDS	52220	52555	.	-	0	ID=cds-WP_001124474.1;Parent=gene-AC56_RS15510;Dbxref=GenBank:WP_001124474.1;Name=WP_001124474.1;Ontology_term=GO:0016226,GO:0009055,GO:0051537;gbkey=CDS;gene=fdx;go_function=electron transfer activity|0009055||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683702.1;locus_tag=AC56_RS15510;product=ISC system 2Fe-2S type ferredoxin;protein_id=WP_001124474.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	52557	54407	.	-	.	ID=gene-AC56_RS15505;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=AC56_RS15505;old_locus_tag=AC56_1387
NZ_JJLS01000154.1	Protein Homology	CDS	52557	54407	.	-	0	ID=cds-WP_032282639.1;Parent=gene-AC56_RS15505;Dbxref=GenBank:WP_032282639.1;Name=WP_032282639.1;Ontology_term=GO:0006457,GO:0016226,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559634.1;locus_tag=AC56_RS15505;product=Fe-S protein assembly chaperone HscA;protein_id=WP_032282639.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	54424	54939	.	-	.	ID=gene-AC56_RS15500;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=AC56_RS15500;old_locus_tag=AC56_1388
NZ_JJLS01000154.1	Protein Homology	CDS	54424	54939	.	-	0	ID=cds-WP_000384420.1;Parent=gene-AC56_RS15500;Dbxref=GenBank:WP_000384420.1;Name=WP_000384420.1;Ontology_term=GO:0051604,GO:0051087;gbkey=CDS;gene=hscB;go_function=protein-folding chaperone binding|0051087||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311420.1;locus_tag=AC56_RS15500;product=co-chaperone HscB;protein_id=WP_000384420.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	55035	55358	.	-	.	ID=gene-AC56_RS15495;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=AC56_RS15495;old_locus_tag=AC56_1390
NZ_JJLS01000154.1	Protein Homology	CDS	55035	55358	.	-	0	ID=cds-WP_000028953.1;Parent=gene-AC56_RS15495;Dbxref=GenBank:WP_000028953.1;Name=WP_000028953.1;gbkey=CDS;gene=iscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311421.1;locus_tag=AC56_RS15495;product=iron-sulfur cluster assembly protein IscA;protein_id=WP_000028953.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	55375	55761	.	-	.	ID=gene-AC56_RS15490;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=AC56_RS15490;old_locus_tag=AC56_1391
NZ_JJLS01000154.1	Protein Homology	CDS	55375	55761	.	-	0	ID=cds-WP_000331707.1;Parent=gene-AC56_RS15490;Dbxref=GenBank:WP_000331707.1;Name=WP_000331707.1;Ontology_term=GO:0016226,GO:0005198,GO:0005506,GO:0051536;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA,iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331707.1;locus_tag=AC56_RS15490;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_000331707.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	55789	57003	.	-	.	ID=gene-AC56_RS15485;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;locus_tag=AC56_RS15485;old_locus_tag=AC56_1392
NZ_JJLS01000154.1	Protein Homology	CDS	55789	57003	.	-	0	ID=cds-WP_001295373.1;Parent=gene-AC56_RS15485;Dbxref=GenBank:WP_001295373.1;Name=WP_001295373.1;gbkey=CDS;gene=iscS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=AC56_RS15485;product=cysteine desulfurase;protein_id=WP_001295373.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	57115	57603	.	-	.	ID=gene-AC56_RS15480;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=AC56_RS15480;old_locus_tag=AC56_1393
NZ_JJLS01000154.1	Protein Homology	CDS	57115	57603	.	-	0	ID=cds-WP_001241357.1;Parent=gene-AC56_RS15480;Dbxref=GenBank:WP_001241357.1;Name=WP_001241357.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002913993.1;locus_tag=AC56_RS15480;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_001241357.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	57873	58613	.	-	.	ID=gene-AC56_RS15475;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=AC56_RS15475;old_locus_tag=AC56_1394
NZ_JJLS01000154.1	Protein Homology	CDS	57873	58613	.	-	0	ID=cds-WP_000940019.1;Parent=gene-AC56_RS15475;Dbxref=GenBank:WP_000940019.1;Name=WP_000940019.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=trmJ;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417027.1;locus_tag=AC56_RS15475;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=WP_000940019.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	58732	59535	.	+	.	ID=gene-AC56_RS15470;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=AC56_RS15470;old_locus_tag=AC56_1395
NZ_JJLS01000154.1	Protein Homology	CDS	58732	59535	.	+	0	ID=cds-WP_000553451.1;Parent=gene-AC56_RS15470;Dbxref=GenBank:WP_000553451.1;Name=WP_000553451.1;Ontology_term=GO:0046854,GO:0008934;gbkey=CDS;gene=suhB;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA;go_process=phosphatidylinositol phosphate biosynthetic process|0046854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553460.1;locus_tag=AC56_RS15470;product=inositol-1-monophosphatase;protein_id=WP_000553451.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	pseudogene	59680	60533	.	+	.	ID=gene-AC56_RS15465;Name=yfhR;gbkey=Gene;gene=yfhR;gene_biotype=pseudogene;locus_tag=AC56_RS15465;old_locus_tag=AC56_1396;pseudo=true
NZ_JJLS01000154.1	Protein Homology	CDS	59680	60533	.	+	0	ID=cds-AC56_RS15465;Parent=gene-AC56_RS15465;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhR;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311427.2;locus_tag=AC56_RS15465;product=alpha/beta hydrolase;pseudo=true;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	60724	62004	.	+	.	ID=gene-AC56_RS15460;Name=csiE;gbkey=Gene;gene=csiE;gene_biotype=protein_coding;locus_tag=AC56_RS15460;old_locus_tag=AC56_1397
NZ_JJLS01000154.1	Protein Homology	CDS	60724	62004	.	+	0	ID=cds-WP_000982997.1;Parent=gene-AC56_RS15460;Dbxref=GenBank:WP_000982997.1;Name=WP_000982997.1;gbkey=CDS;gene=csiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417030.2;locus_tag=AC56_RS15460;product=stationary phase inducible protein CsiE;protein_id=WP_000982997.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	61996	63135	.	-	.	ID=gene-AC56_RS15455;Name=hcaT;gbkey=Gene;gene=hcaT;gene_biotype=protein_coding;locus_tag=AC56_RS15455;old_locus_tag=AC56_1398
NZ_JJLS01000154.1	Protein Homology	CDS	61996	63135	.	-	0	ID=cds-WP_000244174.1;Parent=gene-AC56_RS15455;Dbxref=GenBank:WP_000244174.1;Name=WP_000244174.1;gbkey=CDS;gene=hcaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417031.1;locus_tag=AC56_RS15455;product=3-phenylpropionate MFS transporter;protein_id=WP_000244174.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	63295	64185	.	-	.	ID=gene-AC56_RS15450;Name=hcaR;gbkey=Gene;gene=hcaR;gene_biotype=protein_coding;locus_tag=AC56_RS15450;old_locus_tag=AC56_1399
NZ_JJLS01000154.1	Protein Homology	CDS	63295	64185	.	-	0	ID=cds-WP_000423257.1;Parent=gene-AC56_RS15450;Dbxref=GenBank:WP_000423257.1;Name=WP_000423257.1;gbkey=CDS;gene=hcaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311430.1;locus_tag=AC56_RS15450;product=DNA-binding transcriptional regulator HcaR;protein_id=WP_000423257.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	64321	65682	.	+	.	ID=gene-AC56_RS15445;Name=hcaE;gbkey=Gene;gene=hcaE;gene_biotype=protein_coding;locus_tag=AC56_RS15445;old_locus_tag=AC56_1400
NZ_JJLS01000154.1	Protein Homology	CDS	64321	65682	.	+	0	ID=cds-WP_032278774.1;Parent=gene-AC56_RS15445;Dbxref=GenBank:WP_032278774.1;Name=WP_032278774.1;Ontology_term=GO:0019380,GO:0008695;gbkey=CDS;gene=hcaE;go_function=3-phenylpropionate dioxygenase activity|0008695||IEA;go_process=3-phenylpropionate catabolic process|0019380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311431.1;locus_tag=AC56_RS15445;product=3-phenylpropionate/cinnamic acid dioxygenase subunit alpha;protein_id=WP_032278774.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	65679	66197	.	+	.	ID=gene-AC56_RS15440;Name=hcaF;gbkey=Gene;gene=hcaF;gene_biotype=protein_coding;locus_tag=AC56_RS15440;old_locus_tag=AC56_1401
NZ_JJLS01000154.1	Protein Homology	CDS	65679	66197	.	+	0	ID=cds-WP_001276076.1;Parent=gene-AC56_RS15440;Dbxref=GenBank:WP_001276076.1;Name=WP_001276076.1;Ontology_term=GO:0019380,GO:0008695;gbkey=CDS;gene=hcaF;go_function=3-phenylpropionate dioxygenase activity|0008695||IEA;go_process=3-phenylpropionate catabolic process|0019380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708378.1;locus_tag=AC56_RS15440;product=3-phenylpropionate/cinnamic acid dioxygenase subunit beta;protein_id=WP_001276076.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	66197	66517	.	+	.	ID=gene-AC56_RS15435;Name=hcaC;gbkey=Gene;gene=hcaC;gene_biotype=protein_coding;locus_tag=AC56_RS15435;old_locus_tag=AC56_1402
NZ_JJLS01000154.1	Protein Homology	CDS	66197	66517	.	+	0	ID=cds-WP_001080102.1;Parent=gene-AC56_RS15435;Dbxref=GenBank:WP_001080102.1;Name=WP_001080102.1;Ontology_term=GO:0051537;gbkey=CDS;gene=hcaC;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311433.1;locus_tag=AC56_RS15435;product=bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit;protein_id=WP_001080102.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	66514	67326	.	+	.	ID=gene-AC56_RS15430;Name=hcaB;gbkey=Gene;gene=hcaB;gene_biotype=protein_coding;gene_synonym=phdD,yfhX;locus_tag=AC56_RS15430;old_locus_tag=AC56_1403
NZ_JJLS01000154.1	Protein Homology	CDS	66514	67326	.	+	0	ID=cds-WP_001281377.1;Parent=gene-AC56_RS15430;Dbxref=GenBank:WP_001281377.1;Name=WP_001281377.1;gbkey=CDS;gene=hcaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311434.1;locus_tag=AC56_RS15430;product=3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase;protein_id=WP_001281377.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	67336	68538	.	+	.	ID=gene-AC56_RS15425;Name=hcaD;gbkey=Gene;gene=hcaD;gene_biotype=protein_coding;locus_tag=AC56_RS15425;old_locus_tag=AC56_1404
NZ_JJLS01000154.1	Protein Homology	CDS	67336	68538	.	+	0	ID=cds-WP_032278778.1;Parent=gene-AC56_RS15425;Dbxref=GenBank:WP_032278778.1;Name=WP_032278778.1;gbkey=CDS;gene=hcaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417037.1;locus_tag=AC56_RS15425;product=phenylpropionate dioxygenase ferredoxin reductase subunit;protein_id=WP_032278778.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	68635	69057	.	+	.	ID=gene-AC56_RS15420;Name=yphA;gbkey=Gene;gene=yphA;gene_biotype=protein_coding;locus_tag=AC56_RS15420;old_locus_tag=AC56_1405
NZ_JJLS01000154.1	Protein Homology	CDS	68635	69057	.	+	0	ID=cds-WP_001094726.1;Parent=gene-AC56_RS15420;Dbxref=GenBank:WP_001094726.1;Name=WP_001094726.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yphA;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417038.4;locus_tag=AC56_RS15420;product=DoxX family protein;protein_id=WP_001094726.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	69105	69977	.	-	.	ID=gene-AC56_RS15415;Name=yphB;gbkey=Gene;gene=yphB;gene_biotype=protein_coding;locus_tag=AC56_RS15415;old_locus_tag=AC56_1406
NZ_JJLS01000154.1	Protein Homology	CDS	69105	69977	.	-	0	ID=cds-WP_000158547.1;Parent=gene-AC56_RS15415;Dbxref=GenBank:WP_000158547.1;Name=WP_000158547.1;gbkey=CDS;gene=yphB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417039.1;locus_tag=AC56_RS15415;product=aldose 1-epimerase;protein_id=WP_000158547.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	69989	71083	.	-	.	ID=gene-AC56_RS15410;Name=yphC;gbkey=Gene;gene=yphC;gene_biotype=protein_coding;locus_tag=AC56_RS15410;old_locus_tag=AC56_1407
NZ_JJLS01000154.1	Protein Homology	CDS	69989	71083	.	-	0	ID=cds-WP_000700809.1;Parent=gene-AC56_RS15410;Dbxref=GenBank:WP_000700809.1;Name=WP_000700809.1;Ontology_term=GO:0008270,GO:0016491,GO:0030554;gbkey=CDS;gene=yphC;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708383.1;locus_tag=AC56_RS15410;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_000700809.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	71116	72114	.	-	.	ID=gene-AC56_RS15405;Name=yphD;gbkey=Gene;gene=yphD;gene_biotype=protein_coding;locus_tag=AC56_RS15405;old_locus_tag=AC56_1408
NZ_JJLS01000154.1	Protein Homology	CDS	71116	72114	.	-	0	ID=cds-WP_001276663.1;Parent=gene-AC56_RS15405;Dbxref=GenBank:WP_001276663.1;Name=WP_001276663.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;gene=yphD;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417041.1;locus_tag=AC56_RS15405;product=ABC transporter permease;protein_id=WP_001276663.1;transl_table=11
NZ_JJLS01000154.1	RefSeq	pseudogene	72139	72603	.	-	.	ID=gene-AC56_RS15400;Name=AC56_RS15400;end_range=72603,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS15400;old_locus_tag=AC56_1409;partial=true;pseudo=true
NZ_JJLS01000154.1	Protein Homology	CDS	72139	72603	.	-	0	ID=cds-AC56_RS15400;Parent=gene-AC56_RS15400;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005524;end_range=72603,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311440.1;locus_tag=AC56_RS15400;partial=true;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11
NZ_JJLS01000154.1	RefSeq	gene	72774	73057	.	-	.	ID=gene-AC56_RS15395;Name=AC56_RS15395;end_range=73057,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS15395;old_locus_tag=AC56_1410;partial=true
NZ_JJLS01000154.1	Protein Homology	CDS	72774	73057	.	-	2	ID=cds-WP_148724424.1;Parent=gene-AC56_RS15395;Dbxref=GenBank:WP_148724424.1;Name=WP_148724424.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=73057,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS15395;partial=true;product=transposase;protein_id=WP_148724424.1;transl_table=11
##sequence-region NZ_JJLS01000155.1 1 53374
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000155.1	RefSeq	region	1	53374	.	+	.	ID=NZ_JJLS01000155.1:1..53374;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000155.1	RefSeq	gene	1	357	.	+	.	ID=gene-AC56_RS0125655;Name=AC56_RS0125655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0125655;old_locus_tag=AC56_1411;partial=true;start_range=.,1
NZ_JJLS01000155.1	Protein Homology	CDS	1	357	.	+	0	ID=cds-WP_032282640.1;Parent=gene-AC56_RS0125655;Dbxref=GenBank:WP_032282640.1;Name=WP_032282640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS0125655;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032282640.1;start_range=.,1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	339	533	.	+	.	ID=gene-AC56_RS33720;Name=AC56_RS33720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33720
NZ_JJLS01000155.1	Protein Homology	CDS	339	533	.	+	0	ID=cds-WP_315747918.1;Parent=gene-AC56_RS33720;Dbxref=GenBank:WP_315747918.1;Name=WP_315747918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001341121.1;locus_tag=AC56_RS33720;product=hypothetical protein;protein_id=WP_315747918.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	978	1133	.	+	.	ID=gene-AC56_RS0125670;Name=hokD;gbkey=Gene;gene=hokD;gene_biotype=protein_coding;locus_tag=AC56_RS0125670
NZ_JJLS01000155.1	Protein Homology	CDS	978	1133	.	+	0	ID=cds-WP_000813254.1;Parent=gene-AC56_RS0125670;Dbxref=GenBank:WP_000813254.1;Name=WP_000813254.1;gbkey=CDS;gene=hokD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416080.1;locus_tag=AC56_RS0125670;product=type I toxin-antitoxin system toxin HokD;protein_id=WP_000813254.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	1350	1601	.	+	.	ID=gene-AC56_RS15390;Name=rem;gbkey=Gene;gene=rem;gene_biotype=protein_coding;locus_tag=AC56_RS15390;old_locus_tag=AC56_1414
NZ_JJLS01000155.1	Protein Homology	CDS	1350	1601	.	+	0	ID=cds-WP_000980999.1;Parent=gene-AC56_RS15390;Dbxref=GenBank:WP_000980999.1;Name=WP_000980999.1;gbkey=CDS;gene=rem;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416079.1;locus_tag=AC56_RS15390;product=protein Rem;protein_id=WP_000980999.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	1668	1946	.	+	.	ID=gene-AC56_RS31170;Name=AC56_RS31170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS31170
NZ_JJLS01000155.1	Protein Homology	CDS	1668	1946	.	+	0	ID=cds-WP_032140164.1;Parent=gene-AC56_RS31170;Dbxref=GenBank:WP_032140164.1;Name=WP_032140164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707878.1;locus_tag=AC56_RS31170;product=hypothetical protein;protein_id=WP_032140164.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	1948	2997	.	+	.	ID=gene-AC56_RS15385;Name=ydfU;gbkey=Gene;gene=ydfU;gene_biotype=protein_coding;locus_tag=AC56_RS15385;old_locus_tag=AC56_1415
NZ_JJLS01000155.1	Protein Homology	CDS	1948	2997	.	+	0	ID=cds-WP_024212263.1;Parent=gene-AC56_RS15385;Dbxref=GenBank:WP_024212263.1;Name=WP_024212263.1;gbkey=CDS;gene=ydfU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416078.4;locus_tag=AC56_RS15385;product=DUF968 domain-containing protein;protein_id=WP_024212263.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	3011	3763	.	+	.	ID=gene-AC56_RS15380;Name=ydfT;gbkey=Gene;gene=ydfT;gene_biotype=protein_coding;locus_tag=AC56_RS15380;old_locus_tag=AC56_1416
NZ_JJLS01000155.1	Protein Homology	CDS	3011	3763	.	+	0	ID=cds-WP_001578392.1;Parent=gene-AC56_RS15380;Dbxref=GenBank:WP_001578392.1;Name=WP_001578392.1;gbkey=CDS;gene=ydfT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416077.4;locus_tag=AC56_RS15380;product=antitermination protein;protein_id=WP_001578392.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	pseudogene	3938	4140	.	-	.	ID=gene-AC56_RS0125680;Name=cspF;gbkey=Gene;gene=cspF;gene_biotype=pseudogene;locus_tag=AC56_RS0125680;old_locus_tag=AC56_1417;partial=true;pseudo=true;start_range=.,3938
NZ_JJLS01000155.1	Protein Homology	CDS	3938	4140	.	-	0	ID=cds-AC56_RS0125680;Parent=gene-AC56_RS0125680;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=cspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416076.1;locus_tag=AC56_RS0125680;partial=true;product=cold shock-like protein CspF;pseudo=true;start_range=.,3938;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	4439	4654	.	+	.	ID=gene-AC56_RS15375;Name=cspB;gbkey=Gene;gene=cspB;gene_biotype=protein_coding;locus_tag=AC56_RS15375;old_locus_tag=AC56_1418
NZ_JJLS01000155.1	Protein Homology	CDS	4439	4654	.	+	0	ID=cds-WP_000066485.1;Parent=gene-AC56_RS15375;Dbxref=GenBank:WP_000066485.1;Name=WP_000066485.1;gbkey=CDS;gene=cspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416075.1;locus_tag=AC56_RS15375;product=cold shock-like protein CspB;protein_id=WP_000066485.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	5018	5188	.	-	.	ID=gene-AC56_RS33260;Name=ynfU;gbkey=Gene;gene=ynfU;gene_biotype=protein_coding;locus_tag=AC56_RS33260
NZ_JJLS01000155.1	Protein Homology	CDS	5018	5188	.	-	0	ID=cds-WP_001405948.1;Parent=gene-AC56_RS33260;Dbxref=GenBank:WP_001405948.1;Name=WP_001405948.1;gbkey=CDS;gene=ynfU;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051186.1;locus_tag=AC56_RS33260;product=putative zinc-binding protein YnfU;protein_id=WP_001405948.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	5408	5623	.	+	.	ID=gene-AC56_RS15370;Name=essD;gbkey=Gene;gene=essD;gene_biotype=protein_coding;locus_tag=AC56_RS15370;old_locus_tag=AC56_1420
NZ_JJLS01000155.1	Protein Homology	CDS	5408	5623	.	+	0	ID=cds-WP_000839590.1;Parent=gene-AC56_RS15370;Dbxref=GenBank:WP_000839590.1;Name=WP_000839590.1;gbkey=CDS;gene=essD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416074.4;locus_tag=AC56_RS15370;product=phage lysis protein EssD;protein_id=WP_000839590.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	5628	5939	.	+	.	ID=gene-AC56_RS15365;Name=ydfR;gbkey=Gene;gene=ydfR;gene_biotype=protein_coding;locus_tag=AC56_RS15365;old_locus_tag=AC56_1421
NZ_JJLS01000155.1	Protein Homology	CDS	5628	5939	.	+	0	ID=cds-WP_000189921.1;Parent=gene-AC56_RS15365;Dbxref=GenBank:WP_000189921.1;Name=WP_000189921.1;gbkey=CDS;gene=ydfR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416073.1;locus_tag=AC56_RS15365;product=DUF1327 domain-containing protein;protein_id=WP_000189921.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	5936	6469	.	+	.	ID=gene-AC56_RS15360;Name=rrrQ;gbkey=Gene;gene=rrrQ;gene_biotype=protein_coding;locus_tag=AC56_RS15360;old_locus_tag=AC56_1422
NZ_JJLS01000155.1	Protein Homology	CDS	5936	6469	.	+	0	ID=cds-WP_001092971.1;Parent=gene-AC56_RS15360;Dbxref=GenBank:WP_001092971.1;Name=WP_001092971.1;gbkey=CDS;gene=rrrQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416072.1;locus_tag=AC56_RS15360;product=lysozyme;protein_id=WP_001092971.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	6466	6963	.	+	.	ID=gene-AC56_RS15355;Name=rzpQ;gbkey=Gene;gene=rzpQ;gene_biotype=protein_coding;locus_tag=AC56_RS15355;old_locus_tag=AC56_1423
NZ_JJLS01000155.1	Protein Homology	CDS	6466	6963	.	+	0	ID=cds-WP_001071769.1;Parent=gene-AC56_RS15355;Dbxref=GenBank:WP_001071769.1;Name=WP_001071769.1;gbkey=CDS;gene=rzpQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416071.1;locus_tag=AC56_RS15355;product=DUF2514 domain-containing protein;protein_id=WP_001071769.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	7326	7538	.	+	.	ID=gene-AC56_RS15350;Name=cspI;gbkey=Gene;gene=cspI;gene_biotype=protein_coding;locus_tag=AC56_RS15350;old_locus_tag=AC56_1424
NZ_JJLS01000155.1	Protein Homology	CDS	7326	7538	.	+	0	ID=cds-WP_000066495.1;Parent=gene-AC56_RS15350;Dbxref=GenBank:WP_000066495.1;Name=WP_000066495.1;gbkey=CDS;gene=cspI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416070.1;locus_tag=AC56_RS15350;product=cold shock protein CspI;protein_id=WP_000066495.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	7549	7737	.	+	.	ID=gene-AC56_RS29185;Name=ynfQ;gbkey=Gene;gene=ynfQ;gene_biotype=protein_coding;locus_tag=AC56_RS29185
NZ_JJLS01000155.1	Protein Homology	CDS	7549	7737	.	+	0	ID=cds-WP_071524604.1;Parent=gene-AC56_RS29185;Dbxref=GenBank:WP_071524604.1;Name=WP_071524604.1;gbkey=CDS;gene=ynfQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518790.1;locus_tag=AC56_RS29185;product=cold-shock protein;protein_id=WP_071524604.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	7740	7805	.	+	.	ID=gene-AC56_RS32710;Name=ynfR;gbkey=Gene;gene=ynfR;gene_biotype=protein_coding;locus_tag=AC56_RS32710
NZ_JJLS01000155.1	Protein Homology	CDS	7740	7805	.	+	0	ID=cds-WP_122134696.1;Parent=gene-AC56_RS32710;Dbxref=GenBank:WP_122134696.1;Name=WP_122134696.1;gbkey=CDS;gene=ynfR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518789.1;locus_tag=AC56_RS32710;product=small protein YnfR;protein_id=WP_122134696.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	7810	8040	.	+	.	ID=gene-AC56_RS32715;Name=ynfN;gbkey=Gene;gene=ynfN;gene_biotype=protein_coding;locus_tag=AC56_RS32715
NZ_JJLS01000155.1	Protein Homology	CDS	7810	8040	.	+	0	ID=cds-WP_000720962.1;Parent=gene-AC56_RS32715;Dbxref=GenBank:WP_000720962.1;Name=WP_000720962.1;gbkey=CDS;gene=ynfN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000720962.1;locus_tag=AC56_RS32715;product=protein YnfN;protein_id=WP_000720962.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	8212	8385	.	+	.	ID=gene-AC56_RS15345;Name=gnsB;gbkey=Gene;gene=gnsB;gene_biotype=protein_coding;locus_tag=AC56_RS15345;old_locus_tag=AC56_1425
NZ_JJLS01000155.1	Protein Homology	CDS	8212	8385	.	+	0	ID=cds-WP_001019606.1;Parent=gene-AC56_RS15345;Dbxref=GenBank:WP_001019606.1;Name=WP_001019606.1;gbkey=CDS;gene=gnsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416068.2;locus_tag=AC56_RS15345;product=GnsA/GnsB family addiction module toxin;protein_id=WP_001019606.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	8537	8947	.	-	.	ID=gene-AC56_RS0125690;Name=AC56_RS0125690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0125690
NZ_JJLS01000155.1	Protein Homology	CDS	8537	8947	.	-	0	ID=cds-WP_000035577.1;Parent=gene-AC56_RS0125690;Dbxref=GenBank:WP_000035577.1;Name=WP_000035577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309653.2;locus_tag=AC56_RS0125690;product=DUF1398 domain-containing protein;protein_id=WP_000035577.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	9248	9454	.	+	.	ID=gene-AC56_RS15340;Name=AC56_RS15340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS15340;old_locus_tag=AC56_1426
NZ_JJLS01000155.1	Protein Homology	CDS	9248	9454	.	+	0	ID=cds-WP_001031431.1;Parent=gene-AC56_RS15340;Dbxref=GenBank:WP_001031431.1;Name=WP_001031431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309654.1;locus_tag=AC56_RS15340;product=hypothetical protein;protein_id=WP_001031431.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	pseudogene	9626	10000	.	+	.	ID=gene-AC56_RS15335;Name=AC56_RS15335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS15335;old_locus_tag=AC56_1427;partial=true;pseudo=true;start_range=.,9626
NZ_JJLS01000155.1	Protein Homology	CDS	9626	10000	.	+	0	ID=cds-AC56_RS15335;Parent=gene-AC56_RS15335;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308852.1;locus_tag=AC56_RS15335;partial=true;product=terminase gpA endonuclease subunit;pseudo=true;start_range=.,9626;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	9997	10209	.	+	.	ID=gene-AC56_RS15330;Name=AC56_RS15330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS15330;old_locus_tag=AC56_1428
NZ_JJLS01000155.1	Protein Homology	CDS	9997	10209	.	+	0	ID=cds-WP_001072975.1;Parent=gene-AC56_RS15330;Dbxref=GenBank:WP_001072975.1;Name=WP_001072975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001072975.1;locus_tag=AC56_RS15330;product=hypothetical protein;protein_id=WP_001072975.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	10209	11717	.	+	.	ID=gene-AC56_RS15325;Name=AC56_RS15325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS15325;old_locus_tag=AC56_1429
NZ_JJLS01000155.1	Protein Homology	CDS	10209	11717	.	+	0	ID=cds-WP_032278192.1;Parent=gene-AC56_RS15325;Dbxref=GenBank:WP_032278192.1;Name=WP_032278192.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310988.1;locus_tag=AC56_RS15325;product=phage portal protein;protein_id=WP_032278192.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	11662	13689	.	+	.	ID=gene-AC56_RS15320;Name=AC56_RS15320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS15320;old_locus_tag=AC56_1430
NZ_JJLS01000155.1	Protein Homology	CDS	11662	13689	.	+	0	ID=cds-WP_001136587.1;Parent=gene-AC56_RS15320;Dbxref=GenBank:WP_001136587.1;Name=WP_001136587.1;Ontology_term=GO:0019082,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=viral protein processing|0019082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308856.2;locus_tag=AC56_RS15320;product=ClpP-like prohead protease/major capsid protein fusion protein;protein_id=WP_001136587.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	13776	14099	.	+	.	ID=gene-AC56_RS15315;Name=AC56_RS15315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS15315;old_locus_tag=AC56_1431
NZ_JJLS01000155.1	Protein Homology	CDS	13776	14099	.	+	0	ID=cds-WP_001097050.1;Parent=gene-AC56_RS15315;Dbxref=GenBank:WP_001097050.1;Name=WP_001097050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308857.2;locus_tag=AC56_RS15315;product=DUF2190 family protein;protein_id=WP_001097050.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	14092	14367	.	+	.	ID=gene-AC56_RS15310;Name=AC56_RS15310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS15310;old_locus_tag=AC56_1432
NZ_JJLS01000155.1	Protein Homology	CDS	14092	14367	.	+	0	ID=cds-WP_001283153.1;Parent=gene-AC56_RS15310;Dbxref=GenBank:WP_001283153.1;Name=WP_001283153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308858.1;locus_tag=AC56_RS15310;product=DNA breaking-rejoining protein;protein_id=WP_001283153.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	14379	14957	.	+	.	ID=gene-AC56_RS15305;Name=AC56_RS15305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS15305;old_locus_tag=AC56_1433
NZ_JJLS01000155.1	Protein Homology	CDS	14379	14957	.	+	0	ID=cds-WP_000677102.1;Parent=gene-AC56_RS15305;Dbxref=GenBank:WP_000677102.1;Name=WP_000677102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308859.1;locus_tag=AC56_RS15305;product=phage tail protein;protein_id=WP_000677102.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	14954	15355	.	+	.	ID=gene-AC56_RS15300;Name=AC56_RS15300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS15300;old_locus_tag=AC56_1434
NZ_JJLS01000155.1	Protein Homology	CDS	14954	15355	.	+	0	ID=cds-WP_001079398.1;Parent=gene-AC56_RS15300;Dbxref=GenBank:WP_001079398.1;Name=WP_001079398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707741.1;locus_tag=AC56_RS15300;product=phage minor tail U family protein;protein_id=WP_001079398.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	pseudogene	15366	16108	.	+	.	ID=gene-AC56_RS0125695;Name=AC56_RS0125695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0125695;pseudo=true
NZ_JJLS01000155.1	Protein Homology	CDS	15366	16108	.	+	0	ID=cds-AC56_RS0125695;Parent=gene-AC56_RS0125695;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308861.1;locus_tag=AC56_RS0125695;product=phage tail protein;pseudo=true;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	16169	16555	.	+	.	ID=gene-AC56_RS15295;Name=gpG;gbkey=Gene;gene=gpG;gene_biotype=protein_coding;locus_tag=AC56_RS15295;old_locus_tag=AC56_1437
NZ_JJLS01000155.1	Protein Homology	CDS	16169	16555	.	+	0	ID=cds-WP_032278205.1;Parent=gene-AC56_RS15295;Dbxref=GenBank:WP_032278205.1;Name=WP_032278205.1;gbkey=CDS;gene=gpG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308862.1;locus_tag=AC56_RS15295;product=phage tail assembly chaperone G;protein_id=WP_032278205.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	16564	16893	.	+	.	ID=gene-AC56_RS15290;Name=AC56_RS15290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS15290;old_locus_tag=AC56_1438
NZ_JJLS01000155.1	Protein Homology	CDS	16564	16893	.	+	0	ID=cds-WP_001161009.1;Parent=gene-AC56_RS15290;Dbxref=GenBank:WP_001161009.1;Name=WP_001161009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308863.1;locus_tag=AC56_RS15290;product=phage tail assembly protein T;protein_id=WP_001161009.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	16865	19930	.	+	.	ID=gene-AC56_RS15285;Name=AC56_RS15285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS15285;old_locus_tag=AC56_1439
NZ_JJLS01000155.1	Protein Homology	CDS	16865	19930	.	+	0	ID=cds-WP_032278193.1;Parent=gene-AC56_RS15285;Dbxref=GenBank:WP_032278193.1;Name=WP_032278193.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308864.1;locus_tag=AC56_RS15285;product=phage tail tape measure protein;protein_id=WP_032278193.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	19930	20259	.	+	.	ID=gene-AC56_RS15280;Name=AC56_RS15280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS15280;old_locus_tag=AC56_1440
NZ_JJLS01000155.1	Protein Homology	CDS	19930	20259	.	+	0	ID=cds-WP_000447253.1;Parent=gene-AC56_RS15280;Dbxref=GenBank:WP_000447253.1;Name=WP_000447253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308865.1;locus_tag=AC56_RS15280;product=phage tail protein;protein_id=WP_000447253.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	20269	20967	.	+	.	ID=gene-AC56_RS15275;Name=AC56_RS15275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS15275;old_locus_tag=AC56_1441
NZ_JJLS01000155.1	Protein Homology	CDS	20269	20967	.	+	0	ID=cds-WP_032278195.1;Parent=gene-AC56_RS15275;Dbxref=GenBank:WP_032278195.1;Name=WP_032278195.1;Ontology_term=GO:0046718,GO:0051536,GO:0030430;gbkey=CDS;go_component=host cell cytoplasm|0030430||IEA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=symbiont entry into host cell|0046718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308866.1;locus_tag=AC56_RS15275;product=phage minor tail protein L;protein_id=WP_032278195.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	20972	21715	.	+	.	ID=gene-AC56_RS15270;Name=AC56_RS15270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS15270;old_locus_tag=AC56_1442
NZ_JJLS01000155.1	Protein Homology	CDS	20972	21715	.	+	0	ID=cds-WP_032200033.1;Parent=gene-AC56_RS15270;Dbxref=GenBank:WP_032200033.1;Name=WP_032200033.1;Ontology_term=GO:0006508,GO:0008234,GO:0008235,GO:0008270;gbkey=CDS;go_function=cysteine-type peptidase activity|0008234||IEA,metalloexopeptidase activity|0008235||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309673.1;locus_tag=AC56_RS15270;product=C40 family peptidase;protein_id=WP_032200033.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	21613	22260	.	+	.	ID=gene-AC56_RS15265;Name=AC56_RS15265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS15265;old_locus_tag=AC56_1443
NZ_JJLS01000155.1	Protein Homology	CDS	21613	22260	.	+	0	ID=cds-WP_023277304.1;Parent=gene-AC56_RS15265;Dbxref=GenBank:WP_023277304.1;Name=WP_023277304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461526.1;locus_tag=AC56_RS15265;product=tail assembly protein;protein_id=WP_023277304.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	pseudogene	22321	25719	.	+	.	ID=gene-AC56_RS15260;Name=gpJ;gbkey=Gene;gene=gpJ;gene_biotype=pseudogene;locus_tag=AC56_RS15260;old_locus_tag=AC56_1445;pseudo=true
NZ_JJLS01000155.1	Protein Homology	CDS	22321	25719	.	+	0	ID=cds-AC56_RS15260;Parent=gene-AC56_RS15260;Note=internal stop;gbkey=CDS;gene=gpJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309675.1;locus_tag=AC56_RS15260;product=phage attachment tail tip protein J;pseudo=true;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	25786	26385	.	+	.	ID=gene-AC56_RS15255;Name=AC56_RS15255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS15255;old_locus_tag=AC56_1446
NZ_JJLS01000155.1	Protein Homology	CDS	25786	26385	.	+	0	ID=cds-WP_032278196.1;Parent=gene-AC56_RS15255;Dbxref=GenBank:WP_032278196.1;Name=WP_032278196.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309676.1;locus_tag=AC56_RS15255;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_032278196.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	26450	29863	.	+	.	ID=gene-AC56_RS27920;Name=AC56_RS27920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS27920
NZ_JJLS01000155.1	Protein Homology	CDS	26450	29863	.	+	0	ID=cds-WP_071998942.1;Parent=gene-AC56_RS27920;Dbxref=GenBank:WP_071998942.1;Name=WP_071998942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000279135.1;locus_tag=AC56_RS27920;product=prophage tail fiber N-terminal domain-containing protein;protein_id=WP_071998942.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	29863	30447	.	+	.	ID=gene-AC56_RS15245;Name=AC56_RS15245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS15245;old_locus_tag=AC56_1452
NZ_JJLS01000155.1	Protein Homology	CDS	29863	30447	.	+	0	ID=cds-WP_032278198.1;Parent=gene-AC56_RS15245;Dbxref=GenBank:WP_032278198.1;Name=WP_032278198.1;Ontology_term=GO:0098004;gbkey=CDS;go_process=virus tail fiber assembly|0098004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000885581.1;locus_tag=AC56_RS15245;product=tail fiber assembly protein;protein_id=WP_032278198.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	30420	30557	.	+	.	ID=gene-AC56_RS33725;Name=AC56_RS33725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33725
NZ_JJLS01000155.1	Protein Homology	CDS	30420	30557	.	+	0	ID=cds-WP_001309429.1;Parent=gene-AC56_RS33725;Dbxref=GenBank:WP_001309429.1;Name=WP_001309429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001309429.1;locus_tag=AC56_RS33725;product=hypothetical protein;protein_id=WP_001309429.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	30502	31170	.	-	.	ID=gene-AC56_RS0125710;Name=AC56_RS0125710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0125710
NZ_JJLS01000155.1	Protein Homology	CDS	30502	31170	.	-	0	ID=cds-WP_000240999.1;Parent=gene-AC56_RS0125710;Dbxref=GenBank:WP_000240999.1;Name=WP_000240999.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707858.1;locus_tag=AC56_RS0125710;product=class I SAM-dependent methyltransferase;protein_id=WP_000240999.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	pseudogene	31320	31496	.	+	.	ID=gene-AC56_RS33265;Name=AC56_RS33265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33265;old_locus_tag=AC56_1454;partial=true;pseudo=true;start_range=.,31320
NZ_JJLS01000155.1	Protein Homology	CDS	31320	31496	.	+	0	ID=cds-AC56_RS33265;Parent=gene-AC56_RS33265;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415891.1;locus_tag=AC56_RS33265;partial=true;product=tail fiber assembly protein;pseudo=true;start_range=.,31320;transl_table=11
NZ_JJLS01000155.1	RefSeq	pseudogene	31593	31862	.	+	.	ID=gene-AC56_RS33920;Name=AC56_RS33920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33920;partial=true;pseudo=true;start_range=.,31593
NZ_JJLS01000155.1	Protein Homology	CDS	31593	31862	.	+	0	ID=cds-AC56_RS33920;Parent=gene-AC56_RS33920;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000701868.1;locus_tag=AC56_RS33920;partial=true;product=DUF4376 domain-containing protein;pseudo=true;start_range=.,31593;transl_table=11
NZ_JJLS01000155.1	RefSeq	pseudogene	32085	32210	.	+	.	ID=gene-AC56_RS29205;Name=AC56_RS29205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS29205;old_locus_tag=AC56_1456;partial=true;pseudo=true;start_range=.,32085
NZ_JJLS01000155.1	Protein Homology	CDS	32085	32210	.	+	0	ID=cds-AC56_RS29205;Parent=gene-AC56_RS29205;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415772.1;locus_tag=AC56_RS29205;partial=true;product=OmpW family outer membrane protein;pseudo=true;start_range=.,32085;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	32270	32776	.	-	.	ID=gene-AC56_RS15230;Name=yciE;gbkey=Gene;gene=yciE;gene_biotype=protein_coding;locus_tag=AC56_RS15230;old_locus_tag=AC56_1457
NZ_JJLS01000155.1	Protein Homology	CDS	32270	32776	.	-	0	ID=cds-WP_001079505.1;Parent=gene-AC56_RS15230;Dbxref=GenBank:WP_001079505.1;Name=WP_001079505.1;Ontology_term=GO:0046872;gbkey=CDS;gene=yciE;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415773.1;locus_tag=AC56_RS15230;product=ferritin-like domain-containing protein;protein_id=WP_001079505.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	32822	33322	.	-	.	ID=gene-AC56_RS15225;Name=yciF;gbkey=Gene;gene=yciF;gene_biotype=protein_coding;locus_tag=AC56_RS15225;old_locus_tag=AC56_1458
NZ_JJLS01000155.1	Protein Homology	CDS	32822	33322	.	-	0	ID=cds-WP_032278199.1;Parent=gene-AC56_RS15225;Dbxref=GenBank:WP_032278199.1;Name=WP_032278199.1;Ontology_term=GO:0046872;gbkey=CDS;gene=yciF;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415774.1;locus_tag=AC56_RS15225;product=ferritin-like domain-containing protein;protein_id=WP_032278199.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	33408	33587	.	-	.	ID=gene-AC56_RS15220;Name=yciG;gbkey=Gene;gene=yciG;gene_biotype=protein_coding;locus_tag=AC56_RS15220;old_locus_tag=AC56_1459
NZ_JJLS01000155.1	Protein Homology	CDS	33408	33587	.	-	0	ID=cds-WP_000807651.1;Parent=gene-AC56_RS15220;Dbxref=GenBank:WP_000807651.1;Name=WP_000807651.1;Ontology_term=GO:0006950;gbkey=CDS;gene=yciG;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309858.2;locus_tag=AC56_RS15220;product=general stress protein;protein_id=WP_000807651.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	33968	34774	.	-	.	ID=gene-AC56_RS15215;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=AC56_RS15215;old_locus_tag=AC56_1460
NZ_JJLS01000155.1	Protein Homology	CDS	33968	34774	.	-	0	ID=cds-WP_000443067.1;Parent=gene-AC56_RS15215;Dbxref=GenBank:WP_000443067.1;Name=WP_000443067.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415776.1;locus_tag=AC56_RS15215;product=tryptophan synthase subunit alpha;protein_id=WP_000443067.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	34774	35967	.	-	.	ID=gene-AC56_RS15210;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=AC56_RS15210;old_locus_tag=AC56_1461
NZ_JJLS01000155.1	Protein Homology	CDS	34774	35967	.	-	0	ID=cds-WP_032278201.1;Parent=gene-AC56_RS15210;Dbxref=GenBank:WP_032278201.1;Name=WP_032278201.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415777.1;locus_tag=AC56_RS15210;product=tryptophan synthase subunit beta;protein_id=WP_032278201.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	35979	37340	.	-	.	ID=gene-AC56_RS15205;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;locus_tag=AC56_RS15205;old_locus_tag=AC56_1462
NZ_JJLS01000155.1	Protein Homology	CDS	35979	37340	.	-	0	ID=cds-WP_000983912.1;Parent=gene-AC56_RS15205;Dbxref=GenBank:WP_000983912.1;Name=WP_000983912.1;Ontology_term=GO:0006568,GO:0004425,GO:0004640;gbkey=CDS;gene=trpCF;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707171.1;locus_tag=AC56_RS15205;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=WP_000983912.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	37341	38936	.	-	.	ID=gene-AC56_RS15200;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=AC56_RS15200;old_locus_tag=AC56_1463
NZ_JJLS01000155.1	Protein Homology	CDS	37341	38936	.	-	0	ID=cds-WP_000763511.1;Parent=gene-AC56_RS15200;Dbxref=GenBank:WP_000763511.1;Name=WP_000763511.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784940.1;locus_tag=AC56_RS15200;product=bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD;protein_id=WP_000763511.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	38936	40498	.	-	.	ID=gene-AC56_RS15195;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=AC56_RS15195;old_locus_tag=AC56_1464
NZ_JJLS01000155.1	Protein Homology	CDS	38936	40498	.	-	0	ID=cds-WP_001194582.1;Parent=gene-AC56_RS15195;Dbxref=GenBank:WP_001194582.1;Name=WP_001194582.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415780.1;locus_tag=AC56_RS15195;product=anthranilate synthase component I;protein_id=WP_001194582.1;transl_table=11
NZ_JJLS01000155.1	cmsearch	sequence_feature	40520	40613	.	-	.	ID=id-NZ_JJLS01000155.1:40520..40613;Dbxref=RFAM:RF00513;Note=Trp leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5
NZ_JJLS01000155.1	RefSeq	gene	40590	40634	.	-	.	ID=gene-AC56_RS29210;Name=trpL;gbkey=Gene;gene=trpL;gene_biotype=protein_coding;locus_tag=AC56_RS29210
NZ_JJLS01000155.1	Protein Homology	CDS	40590	40634	.	-	0	ID=cds-WP_001700591.1;Parent=gene-AC56_RS29210;Dbxref=GenBank:WP_001700591.1;Name=WP_001700591.1;gbkey=CDS;gene=trpL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309864.1;locus_tag=AC56_RS29210;product=trp operon leader peptide;protein_id=WP_001700591.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	40772	41653	.	+	.	ID=gene-AC56_RS15190;Name=rnm;gbkey=Gene;gene=rnm;gene_biotype=protein_coding;gene_synonym=trpH,yciV;locus_tag=AC56_RS15190;old_locus_tag=AC56_1465
NZ_JJLS01000155.1	Protein Homology	CDS	40772	41653	.	+	0	ID=cds-WP_001285663.1;Parent=gene-AC56_RS15190;Dbxref=GenBank:WP_001285663.1;Name=WP_001285663.1;Ontology_term=GO:0006364,GO:0004534,GO:0035312,GO:0097657;gbkey=CDS;gene=rnm;go_function=5'-3' RNA exonuclease activity|0004534||IEA,5'-3' DNA exonuclease activity|0035312||IEA,3'%2C5'-nucleotide bisphosphate phosphatase activity|0097657||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415782.1;locus_tag=AC56_RS15190;product=RNase RNM;protein_id=WP_001285663.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	41650	42270	.	+	.	ID=gene-AC56_RS15185;Name=yciO;gbkey=Gene;gene=yciO;gene_biotype=protein_coding;locus_tag=AC56_RS15185;old_locus_tag=AC56_1466
NZ_JJLS01000155.1	Protein Homology	CDS	41650	42270	.	+	0	ID=cds-WP_032278202.1;Parent=gene-AC56_RS15185;Dbxref=GenBank:WP_032278202.1;Name=WP_032278202.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;gene=yciO;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126434.1;locus_tag=AC56_RS15185;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_032278202.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	42298	44193	.	+	.	ID=gene-AC56_RS15180;Name=yciQ;gbkey=Gene;gene=yciQ;gene_biotype=protein_coding;locus_tag=AC56_RS15180;old_locus_tag=AC56_1467
NZ_JJLS01000155.1	Protein Homology	CDS	42298	44193	.	+	0	ID=cds-WP_001301109.1;Parent=gene-AC56_RS15180;Dbxref=GenBank:WP_001301109.1;Name=WP_001301109.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yciQ;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415784.1;locus_tag=AC56_RS15180;product=DUF2207 domain-containing protein;protein_id=WP_001301109.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	44406	45281	.	+	.	ID=gene-AC56_RS15175;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=AC56_RS15175;old_locus_tag=AC56_1468
NZ_JJLS01000155.1	Protein Homology	CDS	44406	45281	.	+	0	ID=cds-WP_001291217.1;Parent=gene-AC56_RS15175;Dbxref=GenBank:WP_001291217.1;Name=WP_001291217.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415785.1;locus_tag=AC56_RS15175;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WP_001291217.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	45321	45911	.	-	.	ID=gene-AC56_RS15170;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=AC56_RS15170;old_locus_tag=AC56_1469
NZ_JJLS01000155.1	Protein Homology	CDS	45321	45911	.	-	0	ID=cds-WP_032278203.1;Parent=gene-AC56_RS15170;Dbxref=GenBank:WP_032278203.1;Name=WP_032278203.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415786.1;locus_tag=AC56_RS15170;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_032278203.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	45908	46666	.	-	.	ID=gene-AC56_RS15165;Name=yciK;gbkey=Gene;gene=yciK;gene_biotype=protein_coding;locus_tag=AC56_RS15165;old_locus_tag=AC56_1470
NZ_JJLS01000155.1	Protein Homology	CDS	45908	46666	.	-	0	ID=cds-WP_000559280.1;Parent=gene-AC56_RS15165;Dbxref=GenBank:WP_000559280.1;Name=WP_000559280.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yciK;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309870.1;locus_tag=AC56_RS15165;product=YciK family oxidoreductase;protein_id=WP_000559280.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	46886	47935	.	+	.	ID=gene-AC56_RS15160;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=AC56_RS15160;old_locus_tag=AC56_1471
NZ_JJLS01000155.1	Protein Homology	CDS	46886	47935	.	+	0	ID=cds-WP_000422045.1;Parent=gene-AC56_RS15160;Dbxref=GenBank:WP_000422045.1;Name=WP_000422045.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415788.1;locus_tag=AC56_RS15160;product=protease SohB;protein_id=WP_000422045.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	47971	48222	.	-	.	ID=gene-AC56_RS15155;Name=yciN;gbkey=Gene;gene=yciN;gene_biotype=protein_coding;locus_tag=AC56_RS15155;old_locus_tag=AC56_1472
NZ_JJLS01000155.1	Protein Homology	CDS	47971	48222	.	-	0	ID=cds-WP_001031494.1;Parent=gene-AC56_RS15155;Dbxref=GenBank:WP_001031494.1;Name=WP_001031494.1;gbkey=CDS;gene=yciN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309872.1;locus_tag=AC56_RS15155;product=YciN family protein;protein_id=WP_001031494.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	48602	51199	.	+	.	ID=gene-AC56_RS15150;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=AC56_RS15150;old_locus_tag=AC56_1473
NZ_JJLS01000155.1	Protein Homology	CDS	48602	51199	.	+	0	ID=cds-WP_001297122.1;Parent=gene-AC56_RS15150;Dbxref=GenBank:WP_001297122.1;Name=WP_001297122.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513601.1;locus_tag=AC56_RS15150;product=type I DNA topoisomerase;protein_id=WP_001297122.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	51409	52383	.	+	.	ID=gene-AC56_RS15145;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=AC56_RS15145;old_locus_tag=AC56_1474
NZ_JJLS01000155.1	Protein Homology	CDS	51409	52383	.	+	0	ID=cds-WP_000776253.1;Parent=gene-AC56_RS15145;Dbxref=GenBank:WP_000776253.1;Name=WP_000776253.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cysB;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017585.1;locus_tag=AC56_RS15145;product=HTH-type transcriptional regulator CysB;protein_id=WP_000776253.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	52702	52842	.	+	.	ID=gene-AC56_RS15140;Name=ymiA;gbkey=Gene;gene=ymiA;gene_biotype=protein_coding;locus_tag=AC56_RS15140;old_locus_tag=AC56_1475
NZ_JJLS01000155.1	Protein Homology	CDS	52702	52842	.	+	0	ID=cds-WP_001300896.1;Parent=gene-AC56_RS15140;Dbxref=GenBank:WP_001300896.1;Name=WP_001300896.1;gbkey=CDS;gene=ymiA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588449.3;locus_tag=AC56_RS15140;product=YmiA family putative membrane protein;protein_id=WP_001300896.1;transl_table=11
NZ_JJLS01000155.1	RefSeq	pseudogene	52845	52952	.	+	.	ID=gene-AC56_RS33270;Name=yciX;end_range=52952,.;gbkey=Gene;gene=yciX;gene_biotype=pseudogene;locus_tag=AC56_RS33270;partial=true;pseudo=true
NZ_JJLS01000155.1	Protein Homology	CDS	52845	52952	.	+	0	ID=cds-AC56_RS33270;Parent=gene-AC56_RS33270;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=52952,.;gbkey=CDS;gene=yciX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588450.2;locus_tag=AC56_RS33270;partial=true;product=protein YciX;pseudo=true;transl_table=11
NZ_JJLS01000155.1	RefSeq	gene	53022	53374	.	+	.	ID=gene-AC56_RS15135;Name=AC56_RS15135;end_range=53374,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS15135;old_locus_tag=AC56_1477;partial=true
NZ_JJLS01000155.1	Protein Homology	CDS	53022	53374	.	+	0	ID=cds-WP_009307866.1-2;Parent=gene-AC56_RS15135;Dbxref=GenBank:WP_009307866.1;Name=WP_009307866.1;end_range=53374,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS15135;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_009307866.1;transl_table=11
##sequence-region NZ_JJLS01000156.1 1 36759
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000156.1	RefSeq	region	1	36759	.	+	.	ID=NZ_JJLS01000156.1:1..36759;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000156.1	RefSeq	gene	1	356	.	+	.	ID=gene-AC56_RS0125730;Name=AC56_RS0125730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0125730;old_locus_tag=AC56_1478;partial=true;start_range=.,1
NZ_JJLS01000156.1	Protein Homology	CDS	1	356	.	+	2	ID=cds-WP_032282644.1;Parent=gene-AC56_RS0125730;Dbxref=GenBank:WP_032282644.1;Name=WP_032282644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS0125730;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032282644.1;start_range=.,1;transl_table=11
NZ_JJLS01000156.1	RefSeq	gene	450	566	.	+	.	ID=gene-AC56_RS33275;Name=AC56_RS33275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33275;old_locus_tag=AC56_1479
NZ_JJLS01000156.1	Protein Homology	CDS	450	566	.	+	0	ID=cds-WP_248784847.1;Parent=gene-AC56_RS33275;Dbxref=GenBank:WP_248784847.1;Name=WP_248784847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016154563.1;locus_tag=AC56_RS33275;product=hypothetical protein;protein_id=WP_248784847.1;transl_table=11
NZ_JJLS01000156.1	RefSeq	gene	680	775	.	+	.	ID=gene-AC56_RS32720;Name=ymiC;gbkey=Gene;gene=ymiC;gene_biotype=protein_coding;locus_tag=AC56_RS32720
NZ_JJLS01000156.1	Protein Homology	CDS	680	775	.	+	0	ID=cds-WP_001310756.1;Parent=gene-AC56_RS32720;Dbxref=GenBank:WP_001310756.1;Name=WP_001310756.1;gbkey=CDS;gene=ymiC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518771.1;locus_tag=AC56_RS32720;product=small membrane protein YmiC;protein_id=WP_001310756.1;transl_table=11
NZ_JJLS01000156.1	RefSeq	gene	939	3614	.	+	.	ID=gene-AC56_RS15130;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=AC56_RS15130;old_locus_tag=AC56_1480
NZ_JJLS01000156.1	Protein Homology	CDS	939	3614	.	+	0	ID=cds-WP_032278209.1;Parent=gene-AC56_RS15130;Dbxref=GenBank:WP_032278209.1;Name=WP_032278209.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415792.1;locus_tag=AC56_RS15130;product=aconitate hydratase AcnA;protein_id=WP_032278209.1;transl_table=11
NZ_JJLS01000156.1	RefSeq	gene	3678	4268	.	-	.	ID=gene-AC56_RS15125;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=AC56_RS15125;old_locus_tag=AC56_1481
NZ_JJLS01000156.1	Protein Homology	CDS	3678	4268	.	-	0	ID=cds-WP_001176295.1;Parent=gene-AC56_RS15125;Dbxref=GenBank:WP_001176295.1;Name=WP_001176295.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309877.1;locus_tag=AC56_RS15125;product=GTP cyclohydrolase II;protein_id=WP_001176295.1;transl_table=11
NZ_JJLS01000156.1	RefSeq	gene	4438	5202	.	+	.	ID=gene-AC56_RS15120;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=AC56_RS15120;old_locus_tag=AC56_1482
NZ_JJLS01000156.1	Protein Homology	CDS	4438	5202	.	+	0	ID=cds-WP_001256540.1;Parent=gene-AC56_RS15120;Dbxref=GenBank:WP_001256540.1;Name=WP_001256540.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=pgpB;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309878.1;locus_tag=AC56_RS15120;product=phosphatidylglycerophosphatase B;protein_id=WP_001256540.1;transl_table=11
NZ_JJLS01000156.1	RefSeq	gene	5351	5659	.	+	.	ID=gene-AC56_RS15115;Name=lapA;gbkey=Gene;gene=lapA;gene_biotype=protein_coding;locus_tag=AC56_RS15115;old_locus_tag=AC56_1483
NZ_JJLS01000156.1	Protein Homology	CDS	5351	5659	.	+	0	ID=cds-WP_000876286.1;Parent=gene-AC56_RS15115;Dbxref=GenBank:WP_000876286.1;Name=WP_000876286.1;gbkey=CDS;gene=lapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415795.1;locus_tag=AC56_RS15115;product=lipopolysaccharide assembly protein LapA;protein_id=WP_000876286.1;transl_table=11
NZ_JJLS01000156.1	RefSeq	gene	5666	6835	.	+	.	ID=gene-AC56_RS15110;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=AC56_RS15110;old_locus_tag=AC56_1484
NZ_JJLS01000156.1	Protein Homology	CDS	5666	6835	.	+	0	ID=cds-WP_000891353.1;Parent=gene-AC56_RS15110;Dbxref=GenBank:WP_000891353.1;Name=WP_000891353.1;Ontology_term=GO:0008653,GO:0005515;gbkey=CDS;gene=lapB;go_function=protein binding|0005515||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309880.1;locus_tag=AC56_RS15110;product=lipopolysaccharide assembly protein LapB;protein_id=WP_000891353.1;transl_table=11
NZ_JJLS01000156.1	RefSeq	gene	7029	7766	.	+	.	ID=gene-AC56_RS15105;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=AC56_RS15105;old_locus_tag=AC56_1486
NZ_JJLS01000156.1	Protein Homology	CDS	7029	7766	.	+	0	ID=cds-WP_000176270.1;Parent=gene-AC56_RS15105;Dbxref=GenBank:WP_000176270.1;Name=WP_000176270.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415797.1;locus_tag=AC56_RS15105;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_000176270.1;transl_table=11
NZ_JJLS01000156.1	RefSeq	gene	7766	8092	.	+	.	ID=gene-AC56_RS15100;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=AC56_RS15100;old_locus_tag=AC56_1487
NZ_JJLS01000156.1	Protein Homology	CDS	7766	8092	.	+	0	ID=cds-WP_001295580.1;Parent=gene-AC56_RS15100;Dbxref=GenBank:WP_001295580.1;Name=WP_001295580.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415798.2;locus_tag=AC56_RS15100;product=stress response translation initiation inhibitor YciH;protein_id=WP_001295580.1;transl_table=11
NZ_JJLS01000156.1	RefSeq	gene	8218	8436	.	-	.	ID=gene-AC56_RS15095;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=protein_coding;locus_tag=AC56_RS15095;old_locus_tag=AC56_1488
NZ_JJLS01000156.1	Protein Homology	CDS	8218	8436	.	-	0	ID=cds-WP_000498253.1;Parent=gene-AC56_RS15095;Dbxref=GenBank:WP_000498253.1;Name=WP_000498253.1;gbkey=CDS;gene=osmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309883.1;locus_tag=AC56_RS15095;product=osmotically-inducible lipoprotein OsmB;protein_id=WP_000498253.1;transl_table=11
NZ_JJLS01000156.1	RefSeq	gene	8705	9454	.	-	.	ID=gene-AC56_RS15090;Name=yciT;gbkey=Gene;gene=yciT;gene_biotype=protein_coding;locus_tag=AC56_RS15090;old_locus_tag=AC56_1489
NZ_JJLS01000156.1	Protein Homology	CDS	8705	9454	.	-	0	ID=cds-WP_001088621.1;Parent=gene-AC56_RS15090;Dbxref=GenBank:WP_001088621.1;Name=WP_001088621.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yciT;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309884.1;locus_tag=AC56_RS15090;product=DNA-binding transcriptional regulator YciT;protein_id=WP_001088621.1;transl_table=11
NZ_JJLS01000156.1	RefSeq	gene	9544	9717	.	-	.	ID=gene-AC56_RS15085;Name=yciZ;gbkey=Gene;gene=yciZ;gene_biotype=protein_coding;locus_tag=AC56_RS15085;old_locus_tag=AC56_1490
NZ_JJLS01000156.1	Protein Homology	CDS	9544	9717	.	-	0	ID=cds-WP_001288368.1;Parent=gene-AC56_RS15085;Dbxref=GenBank:WP_001288368.1;Name=WP_001288368.1;gbkey=CDS;gene=yciZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165317.1;locus_tag=AC56_RS15085;product=YciZ family protein;protein_id=WP_001288368.1;transl_table=11
NZ_JJLS01000156.1	RefSeq	gene	9754	9882	.	+	.	ID=gene-AC56_RS33280;Name=ymiD;gbkey=Gene;gene=ymiD;gene_biotype=protein_coding;locus_tag=AC56_RS33280
NZ_JJLS01000156.1	Protein Homology	CDS	9754	9882	.	+	0	ID=cds-WP_023157074.1;Parent=gene-AC56_RS33280;Dbxref=GenBank:WP_023157074.1;Name=WP_023157074.1;gbkey=CDS;gene=ymiD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051182.1;locus_tag=AC56_RS33280;product=protein YmiD;protein_id=WP_023157074.1;transl_table=11
NZ_JJLS01000156.1	RefSeq	gene	9864	11849	.	-	.	ID=gene-AC56_RS15080;Name=pdeR;gbkey=Gene;gene=pdeR;gene_biotype=protein_coding;locus_tag=AC56_RS15080;old_locus_tag=AC56_1491
NZ_JJLS01000156.1	Protein Homology	CDS	9864	11849	.	-	0	ID=cds-WP_032278211.1;Parent=gene-AC56_RS15080;Dbxref=GenBank:WP_032278211.1;Name=WP_032278211.1;gbkey=CDS;gene=pdeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309885.1;locus_tag=AC56_RS15080;product=cyclic di-GMP phosphodiesterase;protein_id=WP_032278211.1;transl_table=11
NZ_JJLS01000156.1	RefSeq	pseudogene	11903	12008	.	+	.	ID=gene-AC56_RS31190;Name=AC56_RS31190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS31190;pseudo=true
NZ_JJLS01000156.1	Protein Homology	CDS	11903	12008	.	+	0	ID=cds-AC56_RS31190;Parent=gene-AC56_RS31190;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791239.1;locus_tag=AC56_RS31190;product=hypothetical protein;pseudo=true;transl_table=11
NZ_JJLS01000156.1	RefSeq	gene	12085	14019	.	-	.	ID=gene-AC56_RS15075;Name=rnb;gbkey=Gene;gene=rnb;gene_biotype=protein_coding;locus_tag=AC56_RS15075;old_locus_tag=AC56_1492
NZ_JJLS01000156.1	Protein Homology	CDS	12085	14019	.	-	0	ID=cds-WP_000484985.1;Parent=gene-AC56_RS15075;Dbxref=GenBank:WP_000484985.1;Name=WP_000484985.1;Ontology_term=GO:0006401,GO:0003723,GO:0008859;gbkey=CDS;gene=rnb;go_function=RNA binding|0003723||IEA,exoribonuclease II activity|0008859||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415802.1;locus_tag=AC56_RS15075;product=exoribonuclease II;protein_id=WP_000484985.1;transl_table=11
NZ_JJLS01000156.1	RefSeq	gene	14087	15214	.	-	.	ID=gene-AC56_RS15070;Name=yciW;gbkey=Gene;gene=yciW;gene_biotype=protein_coding;locus_tag=AC56_RS15070;old_locus_tag=AC56_1493
NZ_JJLS01000156.1	Protein Homology	CDS	14087	15214	.	-	0	ID=cds-WP_032278212.1;Parent=gene-AC56_RS15070;Dbxref=GenBank:WP_032278212.1;Name=WP_032278212.1;gbkey=CDS;gene=yciW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415803.2;locus_tag=AC56_RS15070;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_032278212.1;transl_table=11
NZ_JJLS01000156.1	RefSeq	gene	15358	16146	.	-	.	ID=gene-AC56_RS15065;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=AC56_RS15065;old_locus_tag=AC56_1494
NZ_JJLS01000156.1	Protein Homology	CDS	15358	16146	.	-	0	ID=cds-WP_000506490.1;Parent=gene-AC56_RS15065;Dbxref=GenBank:WP_000506490.1;Name=WP_000506490.1;gbkey=CDS;gene=fabI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126472.1;locus_tag=AC56_RS15065;product=enoyl-ACP reductase FabI;protein_id=WP_000506490.1;transl_table=11
NZ_JJLS01000156.1	RefSeq	gene	16516	16869	.	-	.	ID=gene-AC56_RS15060;Name=ycjD;gbkey=Gene;gene=ycjD;gene_biotype=protein_coding;locus_tag=AC56_RS15060;old_locus_tag=AC56_1495
NZ_JJLS01000156.1	Protein Homology	CDS	16516	16869	.	-	0	ID=cds-WP_000968857.1;Parent=gene-AC56_RS15060;Dbxref=GenBank:WP_000968857.1;Name=WP_000968857.1;gbkey=CDS;gene=ycjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415805.1;locus_tag=AC56_RS15060;product=DUF559 domain-containing protein;protein_id=WP_000968857.1;transl_table=11
NZ_JJLS01000156.1	RefSeq	gene	16937	17743	.	-	.	ID=gene-AC56_RS15055;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=AC56_RS15055;old_locus_tag=AC56_1496
NZ_JJLS01000156.1	Protein Homology	CDS	16937	17743	.	-	0	ID=cds-WP_000573407.1;Parent=gene-AC56_RS15055;Dbxref=GenBank:WP_000573407.1;Name=WP_000573407.1;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415806.1;locus_tag=AC56_RS15055;product=peptide ABC transporter ATP-binding protein SapF;protein_id=WP_000573407.1;transl_table=11
NZ_JJLS01000156.1	RefSeq	gene	17745	18737	.	-	.	ID=gene-AC56_RS15050;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=AC56_RS15050;old_locus_tag=AC56_1497
NZ_JJLS01000156.1	Protein Homology	CDS	17745	18737	.	-	0	ID=cds-WP_001128858.1;Parent=gene-AC56_RS15050;Dbxref=GenBank:WP_001128858.1;Name=WP_001128858.1;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309895.1;locus_tag=AC56_RS15050;product=peptide ABC transporter ATP-binding protein SapD;protein_id=WP_001128858.1;transl_table=11
NZ_JJLS01000156.1	RefSeq	gene	18737	19627	.	-	.	ID=gene-AC56_RS15045;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=AC56_RS15045;old_locus_tag=AC56_1498
NZ_JJLS01000156.1	Protein Homology	CDS	18737	19627	.	-	0	ID=cds-WP_001146163.1;Parent=gene-AC56_RS15045;Dbxref=GenBank:WP_001146163.1;Name=WP_001146163.1;gbkey=CDS;gene=sapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415808.1;locus_tag=AC56_RS15045;product=peptide ABC transporter permease SapC;protein_id=WP_001146163.1;transl_table=11
NZ_JJLS01000156.1	RefSeq	gene	19614	20579	.	-	.	ID=gene-AC56_RS15040;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=AC56_RS15040;old_locus_tag=AC56_1499
NZ_JJLS01000156.1	Protein Homology	CDS	19614	20579	.	-	0	ID=cds-WP_000583277.1;Parent=gene-AC56_RS15040;Dbxref=GenBank:WP_000583277.1;Name=WP_000583277.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=sapB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126482.1;locus_tag=AC56_RS15040;product=putrescine export ABC transporter permease SapB;protein_id=WP_000583277.1;transl_table=11
NZ_JJLS01000156.1	RefSeq	gene	20576	22219	.	-	.	ID=gene-AC56_RS15035;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=AC56_RS15035;old_locus_tag=AC56_1500
NZ_JJLS01000156.1	Protein Homology	CDS	20576	22219	.	-	0	ID=cds-WP_032278214.1;Parent=gene-AC56_RS15035;Dbxref=GenBank:WP_032278214.1;Name=WP_032278214.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=sapA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415810.1;locus_tag=AC56_RS15035;product=ABC transporter substrate-binding protein SapA;protein_id=WP_032278214.1;transl_table=11
NZ_JJLS01000156.1	RefSeq	gene	22531	22776	.	-	.	ID=gene-AC56_RS15030;Name=ymjA;gbkey=Gene;gene=ymjA;gene_biotype=protein_coding;locus_tag=AC56_RS15030;old_locus_tag=AC56_1501
NZ_JJLS01000156.1	Protein Homology	CDS	22531	22776	.	-	0	ID=cds-WP_001015099.1;Parent=gene-AC56_RS15030;Dbxref=GenBank:WP_001015099.1;Name=WP_001015099.1;gbkey=CDS;gene=ymjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309899.1;locus_tag=AC56_RS15030;product=YmjA family protein;protein_id=WP_001015099.1;transl_table=11
NZ_JJLS01000156.1	RefSeq	gene	22910	24295	.	-	.	ID=gene-AC56_RS15025;Name=puuP;gbkey=Gene;gene=puuP;gene_biotype=protein_coding;locus_tag=AC56_RS15025;old_locus_tag=AC56_1502
NZ_JJLS01000156.1	Protein Homology	CDS	22910	24295	.	-	0	ID=cds-WP_000996861.1;Parent=gene-AC56_RS15025;Dbxref=GenBank:WP_000996861.1;Name=WP_000996861.1;gbkey=CDS;gene=puuP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309900.2;locus_tag=AC56_RS15025;product=putrescine/proton symporter PuuP;protein_id=WP_000996861.1;transl_table=11
NZ_JJLS01000156.1	RefSeq	gene	24285	24449	.	-	.	ID=gene-AC56_RS32725;Name=AC56_RS32725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS32725
NZ_JJLS01000156.1	Protein Homology	CDS	24285	24449	.	-	0	ID=cds-WP_120795382.1;Parent=gene-AC56_RS32725;Dbxref=GenBank:WP_120795382.1;Name=WP_120795382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518772.1;locus_tag=AC56_RS32725;product=protein YmjE;protein_id=WP_120795382.1;transl_table=11
NZ_JJLS01000156.1	RefSeq	gene	24598	26016	.	-	.	ID=gene-AC56_RS15020;Name=puuA;gbkey=Gene;gene=puuA;gene_biotype=protein_coding;locus_tag=AC56_RS15020;old_locus_tag=AC56_1503
NZ_JJLS01000156.1	Protein Homology	CDS	24598	26016	.	-	0	ID=cds-WP_001300763.1;Parent=gene-AC56_RS15020;Dbxref=GenBank:WP_001300763.1;Name=WP_001300763.1;gbkey=CDS;gene=puuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415813.4;locus_tag=AC56_RS15020;product=glutamate-putrescine ligase;protein_id=WP_001300763.1;transl_table=11
NZ_JJLS01000156.1	RefSeq	gene	26228	26992	.	+	.	ID=gene-AC56_RS15015;Name=puuD;gbkey=Gene;gene=puuD;gene_biotype=protein_coding;locus_tag=AC56_RS15015;old_locus_tag=AC56_1504
NZ_JJLS01000156.1	Protein Homology	CDS	26228	26992	.	+	0	ID=cds-WP_001300506.1;Parent=gene-AC56_RS15015;Dbxref=GenBank:WP_001300506.1;Name=WP_001300506.1;Ontology_term=GO:0016787;gbkey=CDS;gene=puuD;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415814.4;locus_tag=AC56_RS15015;product=gamma-glutamyl-gamma-aminobutyrate hydrolase;protein_id=WP_001300506.1;transl_table=11
NZ_JJLS01000156.1	RefSeq	gene	27019	27576	.	+	.	ID=gene-AC56_RS15010;Name=puuR;gbkey=Gene;gene=puuR;gene_biotype=protein_coding;locus_tag=AC56_RS15010;old_locus_tag=AC56_1505
NZ_JJLS01000156.1	Protein Homology	CDS	27019	27576	.	+	0	ID=cds-WP_001278727.1;Parent=gene-AC56_RS15010;Dbxref=GenBank:WP_001278727.1;Name=WP_001278727.1;gbkey=CDS;gene=puuR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001464354.1;locus_tag=AC56_RS15010;product=HTH-type transcriptional regulator PuuR;protein_id=WP_001278727.1;transl_table=11
NZ_JJLS01000156.1	RefSeq	gene	27851	29338	.	+	.	ID=gene-AC56_RS15005;Name=puuC;gbkey=Gene;gene=puuC;gene_biotype=protein_coding;locus_tag=AC56_RS15005;old_locus_tag=AC56_1506
NZ_JJLS01000156.1	Protein Homology	CDS	27851	29338	.	+	0	ID=cds-WP_001009090.1;Parent=gene-AC56_RS15005;Dbxref=GenBank:WP_001009090.1;Name=WP_001009090.1;Ontology_term=GO:0016620;gbkey=CDS;gene=puuC;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415816.1;locus_tag=AC56_RS15005;product=aldehyde dehydrogenase PuuC;protein_id=WP_001009090.1;transl_table=11
NZ_JJLS01000156.1	RefSeq	gene	29340	30620	.	+	.	ID=gene-AC56_RS15000;Name=puuB;gbkey=Gene;gene=puuB;gene_biotype=protein_coding;locus_tag=AC56_RS15000;old_locus_tag=AC56_1507
NZ_JJLS01000156.1	Protein Homology	CDS	29340	30620	.	+	0	ID=cds-WP_000134870.1;Parent=gene-AC56_RS15000;Dbxref=GenBank:WP_000134870.1;Name=WP_000134870.1;gbkey=CDS;gene=puuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415817.1;locus_tag=AC56_RS15000;product=gamma-glutamylputrescine oxidase;protein_id=WP_000134870.1;transl_table=11
NZ_JJLS01000156.1	RefSeq	gene	30658	31923	.	+	.	ID=gene-AC56_RS14995;Name=puuE;gbkey=Gene;gene=puuE;gene_biotype=protein_coding;locus_tag=AC56_RS14995;old_locus_tag=AC56_1508
NZ_JJLS01000156.1	Protein Homology	CDS	30658	31923	.	+	0	ID=cds-WP_000069247.1;Parent=gene-AC56_RS14995;Dbxref=GenBank:WP_000069247.1;Name=WP_000069247.1;Ontology_term=GO:0009448;gbkey=CDS;gene=puuE;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415818.1;locus_tag=AC56_RS14995;product=4-aminobutyrate transaminase;protein_id=WP_000069247.1;transl_table=11
NZ_JJLS01000156.1	RefSeq	gene	32041	33018	.	-	.	ID=gene-AC56_RS14990;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=AC56_RS14990;old_locus_tag=AC56_1509
NZ_JJLS01000156.1	Protein Homology	CDS	32041	33018	.	-	0	ID=cds-WP_000852835.1;Parent=gene-AC56_RS14990;Dbxref=GenBank:WP_000852835.1;Name=WP_000852835.1;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309907.2;locus_tag=AC56_RS14990;product=phage shock protein operon transcriptional activator;protein_id=WP_000852835.1;transl_table=11
NZ_JJLS01000156.1	RefSeq	gene	33185	33853	.	+	.	ID=gene-AC56_RS14985;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=AC56_RS14985;old_locus_tag=AC56_1510
NZ_JJLS01000156.1	Protein Homology	CDS	33185	33853	.	+	0	ID=cds-WP_000511025.1;Parent=gene-AC56_RS14985;Dbxref=GenBank:WP_000511025.1;Name=WP_000511025.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309908.1;locus_tag=AC56_RS14985;product=phage shock protein PspA;protein_id=WP_000511025.1;transl_table=11
NZ_JJLS01000156.1	RefSeq	gene	33907	34131	.	+	.	ID=gene-AC56_RS14980;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=AC56_RS14980;old_locus_tag=AC56_1511
NZ_JJLS01000156.1	Protein Homology	CDS	33907	34131	.	+	0	ID=cds-WP_001274963.1;Parent=gene-AC56_RS14980;Dbxref=GenBank:WP_001274963.1;Name=WP_001274963.1;Ontology_term=GO:0009271;gbkey=CDS;gene=pspB;go_process=phage shock|0009271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309909.1;locus_tag=AC56_RS14980;product=envelope stress response membrane protein PspB;protein_id=WP_001274963.1;transl_table=11
NZ_JJLS01000156.1	RefSeq	gene	34131	34490	.	+	.	ID=gene-AC56_RS14975;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=protein_coding;locus_tag=AC56_RS14975;old_locus_tag=AC56_1512
NZ_JJLS01000156.1	Protein Homology	CDS	34131	34490	.	+	0	ID=cds-WP_000907387.1;Parent=gene-AC56_RS14975;Dbxref=GenBank:WP_000907387.1;Name=WP_000907387.1;gbkey=CDS;gene=pspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309910.1;locus_tag=AC56_RS14975;product=envelope stress response membrane protein PspC;protein_id=WP_000907387.1;transl_table=11
NZ_JJLS01000156.1	RefSeq	gene	34499	34720	.	+	.	ID=gene-AC56_RS14970;Name=pspD;gbkey=Gene;gene=pspD;gene_biotype=protein_coding;locus_tag=AC56_RS14970;old_locus_tag=AC56_1513
NZ_JJLS01000156.1	Protein Homology	CDS	34499	34720	.	+	0	ID=cds-WP_001295585.1;Parent=gene-AC56_RS14970;Dbxref=GenBank:WP_001295585.1;Name=WP_001295585.1;gbkey=CDS;gene=pspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309911.1;locus_tag=AC56_RS14970;product=phage shock protein PspD;protein_id=WP_001295585.1;transl_table=11
NZ_JJLS01000156.1	RefSeq	gene	34795	35109	.	+	.	ID=gene-AC56_RS14965;Name=pspE;gbkey=Gene;gene=pspE;gene_biotype=protein_coding;locus_tag=AC56_RS14965;old_locus_tag=AC56_1514
NZ_JJLS01000156.1	Protein Homology	CDS	34795	35109	.	+	0	ID=cds-WP_000473109.1;Parent=gene-AC56_RS14965;Dbxref=GenBank:WP_000473109.1;Name=WP_000473109.1;gbkey=CDS;gene=pspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415824.1;locus_tag=AC56_RS14965;product=thiosulfate sulfurtransferase PspE;protein_id=WP_000473109.1;transl_table=11
NZ_JJLS01000156.1	RefSeq	pseudogene	35321	36235	.	+	.	ID=gene-AC56_RS14960;Name=ycjM;end_range=36235,.;gbkey=Gene;gene=ycjM;gene_biotype=pseudogene;locus_tag=AC56_RS14960;old_locus_tag=AC56_1515;partial=true;pseudo=true
NZ_JJLS01000156.1	Protein Homology	CDS	35321	36235	.	+	0	ID=cds-AC56_RS14960;Parent=gene-AC56_RS14960;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=36235,.;gbkey=CDS;gene=ycjM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415825.4;locus_tag=AC56_RS14960;partial=true;product=glucosylglycerate phosphorylase;pseudo=true;transl_table=11
NZ_JJLS01000156.1	RefSeq	gene	36269	36759	.	+	.	ID=gene-AC56_RS14955;Name=AC56_RS14955;end_range=36759,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS14955;old_locus_tag=AC56_1516;partial=true
NZ_JJLS01000156.1	Protein Homology	CDS	36269	36759	.	+	0	ID=cds-WP_162720866.1;Parent=gene-AC56_RS14955;Dbxref=GenBank:WP_162720866.1;Name=WP_162720866.1;Ontology_term=GO:0004803;end_range=36759,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS14955;partial=true;product=IS5 family transposase;protein_id=WP_162720866.1;transl_table=11
##sequence-region NZ_JJLS01000157.1 1 22450
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000157.1	RefSeq	region	1	22450	.	+	.	ID=NZ_JJLS01000157.1:1..22450;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000157.1	RefSeq	gene	1	335	.	+	.	ID=gene-AC56_RS0125765;Name=AC56_RS0125765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0125765;old_locus_tag=AC56_1517;partial=true;start_range=.,1
NZ_JJLS01000157.1	Protein Homology	CDS	1	335	.	+	2	ID=cds-WP_032175106.1;Parent=gene-AC56_RS0125765;Dbxref=GenBank:WP_032175106.1;Name=WP_032175106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS0125765;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032175106.1;start_range=.,1;transl_table=11
NZ_JJLS01000157.1	RefSeq	pseudogene	342	973	.	+	.	ID=gene-AC56_RS14950;Name=AC56_RS14950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS14950;old_locus_tag=AC56_1518;partial=true;pseudo=true;start_range=.,342
NZ_JJLS01000157.1	Protein Homology	CDS	342	973	.	+	0	ID=cds-AC56_RS14950;Parent=gene-AC56_RS14950;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415825.4;locus_tag=AC56_RS14950;partial=true;product=sugar phosphorylase;pseudo=true;start_range=.,342;transl_table=11
NZ_JJLS01000157.1	RefSeq	gene	987	2279	.	+	.	ID=gene-AC56_RS14945;Name=ycjN;gbkey=Gene;gene=ycjN;gene_biotype=protein_coding;locus_tag=AC56_RS14945;old_locus_tag=AC56_1519
NZ_JJLS01000157.1	Protein Homology	CDS	987	2279	.	+	0	ID=cds-WP_000597460.1;Parent=gene-AC56_RS14945;Dbxref=GenBank:WP_000597460.1;Name=WP_000597460.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;gene=ycjN;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415826.1;locus_tag=AC56_RS14945;product=ABC transporter substrate-binding protein;protein_id=WP_000597460.1;transl_table=11
NZ_JJLS01000157.1	RefSeq	gene	2300	3181	.	+	.	ID=gene-AC56_RS14940;Name=ycjO;gbkey=Gene;gene=ycjO;gene_biotype=protein_coding;locus_tag=AC56_RS14940;old_locus_tag=AC56_1520
NZ_JJLS01000157.1	Protein Homology	CDS	2300	3181	.	+	0	ID=cds-WP_001080790.1;Parent=gene-AC56_RS14940;Dbxref=GenBank:WP_001080790.1;Name=WP_001080790.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;gene=ycjO;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415827.1;locus_tag=AC56_RS14940;product=carbohydrate ABC transporter permease;protein_id=WP_001080790.1;transl_table=11
NZ_JJLS01000157.1	RefSeq	gene	3168	4010	.	+	.	ID=gene-AC56_RS14935;Name=ycjP;gbkey=Gene;gene=ycjP;gene_biotype=protein_coding;locus_tag=AC56_RS14935;old_locus_tag=AC56_1521
NZ_JJLS01000157.1	Protein Homology	CDS	3168	4010	.	+	0	ID=cds-WP_000224659.1;Parent=gene-AC56_RS14935;Dbxref=GenBank:WP_000224659.1;Name=WP_000224659.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;gene=ycjP;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415828.1;locus_tag=AC56_RS14935;product=carbohydrate ABC transporter permease;protein_id=WP_000224659.1;transl_table=11
NZ_JJLS01000157.1	RefSeq	gene	4041	5093	.	+	.	ID=gene-AC56_RS14930;Name=ycjQ;gbkey=Gene;gene=ycjQ;gene_biotype=protein_coding;locus_tag=AC56_RS14930;old_locus_tag=AC56_1522
NZ_JJLS01000157.1	Protein Homology	CDS	4041	5093	.	+	0	ID=cds-WP_000737347.1;Parent=gene-AC56_RS14930;Dbxref=GenBank:WP_000737347.1;Name=WP_000737347.1;Ontology_term=GO:0008270,GO:0016616,GO:0030554;gbkey=CDS;gene=ycjQ;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415829.1;locus_tag=AC56_RS14930;product=zinc-dependent alcohol dehydrogenase;protein_id=WP_000737347.1;transl_table=11
NZ_JJLS01000157.1	RefSeq	gene	5112	5861	.	+	.	ID=gene-AC56_RS14925;Name=ycjR;gbkey=Gene;gene=ycjR;gene_biotype=protein_coding;locus_tag=AC56_RS14925;old_locus_tag=AC56_1523
NZ_JJLS01000157.1	Protein Homology	CDS	5112	5861	.	+	0	ID=cds-WP_050439856.1;Parent=gene-AC56_RS14925;Dbxref=GenBank:WP_050439856.1;Name=WP_050439856.1;Ontology_term=GO:0003824,GO:0016853;gbkey=CDS;gene=ycjR;go_function=catalytic activity|0003824||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415830.2;locus_tag=AC56_RS14925;product=sugar phosphate isomerase/epimerase family protein;protein_id=WP_050439856.1;transl_table=11
NZ_JJLS01000157.1	RefSeq	gene	5910	6965	.	+	.	ID=gene-AC56_RS14920;Name=ycjS;gbkey=Gene;gene=ycjS;gene_biotype=protein_coding;locus_tag=AC56_RS14920;old_locus_tag=AC56_1524
NZ_JJLS01000157.1	Protein Homology	CDS	5910	6965	.	+	0	ID=cds-WP_032282650.1;Parent=gene-AC56_RS14920;Dbxref=GenBank:WP_032282650.1;Name=WP_032282650.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;gene=ycjS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415831.1;locus_tag=AC56_RS14920;product=Gfo/Idh/MocA family protein;protein_id=WP_032282650.1;transl_table=11
NZ_JJLS01000157.1	RefSeq	gene	6962	9229	.	+	.	ID=gene-AC56_RS14915;Name=ycjT;gbkey=Gene;gene=ycjT;gene_biotype=protein_coding;locus_tag=AC56_RS14915;old_locus_tag=AC56_1525
NZ_JJLS01000157.1	Protein Homology	CDS	6962	9229	.	+	0	ID=cds-WP_032278222.1;Parent=gene-AC56_RS14915;Dbxref=GenBank:WP_032278222.1;Name=WP_032278222.1;gbkey=CDS;gene=ycjT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415832.1;locus_tag=AC56_RS14915;product=kojibiose phosphorylase;protein_id=WP_032278222.1;transl_table=11
NZ_JJLS01000157.1	RefSeq	gene	9226	9885	.	+	.	ID=gene-AC56_RS14910;Name=pgmB;gbkey=Gene;gene=pgmB;gene_biotype=protein_coding;locus_tag=AC56_RS14910;old_locus_tag=AC56_1526
NZ_JJLS01000157.1	Protein Homology	CDS	9226	9885	.	+	0	ID=cds-WP_032278223.1;Parent=gene-AC56_RS14910;Dbxref=GenBank:WP_032278223.1;Name=WP_032278223.1;Ontology_term=GO:0005975,GO:0000287,GO:0008801;gbkey=CDS;gene=pgmB;go_function=magnesium ion binding|0000287||IEA,beta-phosphoglucomutase activity|0008801||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415833.1;locus_tag=AC56_RS14910;product=beta-phosphoglucomutase;protein_id=WP_032278223.1;transl_table=11
NZ_JJLS01000157.1	RefSeq	gene	9899	10981	.	+	.	ID=gene-AC56_RS14905;Name=AC56_RS14905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS14905;old_locus_tag=AC56_1527
NZ_JJLS01000157.1	Protein Homology	CDS	9899	10981	.	+	0	ID=cds-WP_032278224.1;Parent=gene-AC56_RS14905;Dbxref=GenBank:WP_032278224.1;Name=WP_032278224.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309924.1;locus_tag=AC56_RS14905;product=ABC transporter ATP-binding protein;protein_id=WP_032278224.1;transl_table=11
NZ_JJLS01000157.1	RefSeq	gene	11026	11931	.	+	.	ID=gene-AC56_RS14900;Name=ompG;gbkey=Gene;gene=ompG;gene_biotype=protein_coding;locus_tag=AC56_RS14900;old_locus_tag=AC56_1528
NZ_JJLS01000157.1	Protein Homology	CDS	11026	11931	.	+	0	ID=cds-WP_000735236.1;Parent=gene-AC56_RS14900;Dbxref=GenBank:WP_000735236.1;Name=WP_000735236.1;gbkey=CDS;gene=ompG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415835.1;locus_tag=AC56_RS14900;product=monomeric porin OmpG;protein_id=WP_000735236.1;transl_table=11
NZ_JJLS01000157.1	RefSeq	gene	12042	13040	.	-	.	ID=gene-AC56_RS14895;Name=ycjW;gbkey=Gene;gene=ycjW;gene_biotype=protein_coding;locus_tag=AC56_RS14895;old_locus_tag=AC56_1529
NZ_JJLS01000157.1	Protein Homology	CDS	12042	13040	.	-	0	ID=cds-WP_000075375.1;Parent=gene-AC56_RS14895;Dbxref=GenBank:WP_000075375.1;Name=WP_000075375.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=ycjW;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415836.1;locus_tag=AC56_RS14895;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000075375.1;transl_table=11
NZ_JJLS01000157.1	RefSeq	gene	13196	14593	.	+	.	ID=gene-AC56_RS14890;Name=ycjX;gbkey=Gene;gene=ycjX;gene_biotype=protein_coding;locus_tag=AC56_RS14890;old_locus_tag=AC56_1530
NZ_JJLS01000157.1	Protein Homology	CDS	13196	14593	.	+	0	ID=cds-WP_000825775.1;Parent=gene-AC56_RS14890;Dbxref=GenBank:WP_000825775.1;Name=WP_000825775.1;gbkey=CDS;gene=ycjX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126510.1;locus_tag=AC56_RS14890;product=YcjX family protein;protein_id=WP_000825775.1;transl_table=11
NZ_JJLS01000157.1	RefSeq	gene	14590	15651	.	+	.	ID=gene-AC56_RS14885;Name=ycjF;gbkey=Gene;gene=ycjF;gene_biotype=protein_coding;locus_tag=AC56_RS14885;old_locus_tag=AC56_1531
NZ_JJLS01000157.1	Protein Homology	CDS	14590	15651	.	+	0	ID=cds-WP_000138728.1;Parent=gene-AC56_RS14885;Dbxref=GenBank:WP_000138728.1;Name=WP_000138728.1;gbkey=CDS;gene=ycjF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415838.1;locus_tag=AC56_RS14885;product=YcjF family protein;protein_id=WP_000138728.1;transl_table=11
NZ_JJLS01000157.1	RefSeq	gene	15799	17340	.	+	.	ID=gene-AC56_RS14880;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=AC56_RS14880;old_locus_tag=AC56_1532
NZ_JJLS01000157.1	Protein Homology	CDS	15799	17340	.	+	0	ID=cds-WP_001300658.1;Parent=gene-AC56_RS14880;Dbxref=GenBank:WP_001300658.1;Name=WP_001300658.1;Ontology_term=GO:0006355,GO:0008134;gbkey=CDS;gene=tyrR;go_function=transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415839.1;locus_tag=AC56_RS14880;product=transcriptional regulator TyrR;protein_id=WP_001300658.1;transl_table=11
NZ_JJLS01000157.1	RefSeq	gene	17384	17890	.	-	.	ID=gene-AC56_RS14875;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=AC56_RS14875;old_locus_tag=AC56_1533
NZ_JJLS01000157.1	Protein Homology	CDS	17384	17890	.	-	0	ID=cds-WP_000084387.1;Parent=gene-AC56_RS14875;Dbxref=GenBank:WP_000084387.1;Name=WP_000084387.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309930.1;locus_tag=AC56_RS14875;product=thiol peroxidase;protein_id=WP_000084387.1;transl_table=11
NZ_JJLS01000157.1	RefSeq	gene	18009	18974	.	+	.	ID=gene-AC56_RS14870;Name=ycjG;gbkey=Gene;gene=ycjG;gene_biotype=protein_coding;locus_tag=AC56_RS14870;old_locus_tag=AC56_1534
NZ_JJLS01000157.1	Protein Homology	CDS	18009	18974	.	+	0	ID=cds-WP_032183014.1;Parent=gene-AC56_RS14870;Dbxref=GenBank:WP_032183014.1;Name=WP_032183014.1;Ontology_term=GO:0009063,GO:0016855;gbkey=CDS;gene=ycjG;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415841.4;locus_tag=AC56_RS14870;product=L-Ala-D/L-Glu epimerase;protein_id=WP_032183014.1;transl_table=11
NZ_JJLS01000157.1	RefSeq	gene	18949	19677	.	-	.	ID=gene-AC56_RS14865;Name=mpaA;gbkey=Gene;gene=mpaA;gene_biotype=protein_coding;locus_tag=AC56_RS14865;old_locus_tag=AC56_1535
NZ_JJLS01000157.1	Protein Homology	CDS	18949	19677	.	-	0	ID=cds-WP_032278225.1;Parent=gene-AC56_RS14865;Dbxref=GenBank:WP_032278225.1;Name=WP_032278225.1;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;gene=mpaA;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415842.2;locus_tag=AC56_RS14865;product=murein tripeptide amidase MpaA;protein_id=WP_032278225.1;transl_table=11
NZ_JJLS01000157.1	RefSeq	pseudogene	19804	19941	.	-	.	ID=gene-AC56_RS14860;Name=AC56_RS14860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS14860;old_locus_tag=AC56_1536;partial=true;pseudo=true;start_range=.,19804
NZ_JJLS01000157.1	Protein Homology	CDS	19804	19941	.	-	0	ID=cds-AC56_RS14860;Parent=gene-AC56_RS14860;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707232.2;locus_tag=AC56_RS14860;partial=true;product=NAD-dependent dehydratase;pseudo=true;start_range=.,19804;transl_table=11
NZ_JJLS01000157.1	RefSeq	pseudogene	20012	20932	.	-	.	ID=gene-AC56_RS14855;Name=ycjY;gbkey=Gene;gene=ycjY;gene_biotype=pseudogene;locus_tag=AC56_RS14855;old_locus_tag=AC56_1537;pseudo=true
NZ_JJLS01000157.1	Protein Homology	CDS	20012	20932	.	-	0	ID=cds-AC56_RS14855;Parent=gene-AC56_RS14855;Note=internal stop;Ontology_term=GO:0016787;gbkey=CDS;gene=ycjY;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415843.2;locus_tag=AC56_RS14855;product=alpha/beta hydrolase;pseudo=true;transl_table=11
NZ_JJLS01000157.1	RefSeq	gene	21070	21969	.	+	.	ID=gene-AC56_RS14850;Name=pgrR;gbkey=Gene;gene=pgrR;gene_biotype=protein_coding;locus_tag=AC56_RS14850;old_locus_tag=AC56_1538
NZ_JJLS01000157.1	Protein Homology	CDS	21070	21969	.	+	0	ID=cds-WP_000817708.1;Parent=gene-AC56_RS14850;Dbxref=GenBank:WP_000817708.1;Name=WP_000817708.1;gbkey=CDS;gene=pgrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415844.1;locus_tag=AC56_RS14850;product=DNA-binding transcriptional regulator PgrR;protein_id=WP_000817708.1;transl_table=11
NZ_JJLS01000157.1	RefSeq	pseudogene	22060	22450	.	-	.	ID=gene-AC56_RS14845;Name=AC56_RS14845;end_range=22450,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS14845;old_locus_tag=AC56_1539;partial=true;pseudo=true
NZ_JJLS01000157.1	Protein Homology	CDS	22060	22450	.	-	1	ID=cds-AC56_RS14845;Parent=gene-AC56_RS14845;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=22450,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS14845;partial=true;product=IS5-like element IS903B family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000158.1 1 19003
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000158.1	RefSeq	region	1	19003	.	+	.	ID=NZ_JJLS01000158.1:1..19003;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000158.1	RefSeq	gene	1	324	.	-	.	ID=gene-AC56_RS14840;Name=AC56_RS14840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS14840;old_locus_tag=AC56_1540;partial=true;start_range=.,1
NZ_JJLS01000158.1	Protein Homology	CDS	1	324	.	-	0	ID=cds-WP_032282653.1;Parent=gene-AC56_RS14840;Dbxref=GenBank:WP_032282653.1;Name=WP_032282653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1;locus_tag=AC56_RS14840;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032282653.1;start_range=.,1;transl_table=11
NZ_JJLS01000158.1	RefSeq	gene	713	2326	.	+	.	ID=gene-AC56_RS14835;Name=mppA;gbkey=Gene;gene=mppA;gene_biotype=protein_coding;locus_tag=AC56_RS14835;old_locus_tag=AC56_1541
NZ_JJLS01000158.1	Protein Homology	CDS	713	2326	.	+	0	ID=cds-WP_032278228.1;Parent=gene-AC56_RS14835;Dbxref=GenBank:WP_032278228.1;Name=WP_032278228.1;gbkey=CDS;gene=mppA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415845.2;locus_tag=AC56_RS14835;product=murein tripeptide ABC transporter substrate-binding protein MppA;protein_id=WP_032278228.1;transl_table=11
NZ_JJLS01000158.1	RefSeq	gene	2377	3408	.	-	.	ID=gene-AC56_RS14830;Name=ynaI;gbkey=Gene;gene=ynaI;gene_biotype=protein_coding;locus_tag=AC56_RS14830;old_locus_tag=AC56_1542
NZ_JJLS01000158.1	Protein Homology	CDS	2377	3408	.	-	0	ID=cds-WP_000559900.1;Parent=gene-AC56_RS14830;Dbxref=GenBank:WP_000559900.1;Name=WP_000559900.1;gbkey=CDS;gene=ynaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309939.1;locus_tag=AC56_RS14830;product=low conductance mechanosensitive channel YnaI;protein_id=WP_000559900.1;transl_table=11
NZ_JJLS01000158.1	RefSeq	gene	3652	3909	.	+	.	ID=gene-AC56_RS14825;Name=ynaJ;gbkey=Gene;gene=ynaJ;gene_biotype=protein_coding;locus_tag=AC56_RS14825;old_locus_tag=AC56_1543
NZ_JJLS01000158.1	Protein Homology	CDS	3652	3909	.	+	0	ID=cds-WP_000605090.1;Parent=gene-AC56_RS14825;Dbxref=GenBank:WP_000605090.1;Name=WP_000605090.1;gbkey=CDS;gene=ynaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309940.1;locus_tag=AC56_RS14825;product=DUF2534 family protein;protein_id=WP_000605090.1;transl_table=11
NZ_JJLS01000158.1	RefSeq	gene	3959	4909	.	-	.	ID=gene-AC56_RS14820;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;locus_tag=AC56_RS14820;old_locus_tag=AC56_1544
NZ_JJLS01000158.1	Protein Homology	CDS	3959	4909	.	-	0	ID=cds-WP_032278229.1;Parent=gene-AC56_RS14820;Dbxref=GenBank:WP_032278229.1;Name=WP_032278229.1;gbkey=CDS;gene=uspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309941.1;locus_tag=AC56_RS14820;product=universal stress protein UspE;protein_id=WP_032278229.1;transl_table=11
NZ_JJLS01000158.1	RefSeq	gene	5061	5813	.	-	.	ID=gene-AC56_RS14815;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=AC56_RS14815;old_locus_tag=AC56_1545
NZ_JJLS01000158.1	Protein Homology	CDS	5061	5813	.	-	0	ID=cds-WP_000611911.1;Parent=gene-AC56_RS14815;Dbxref=GenBank:WP_000611911.1;Name=WP_000611911.1;gbkey=CDS;gene=fnr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007849744.1;locus_tag=AC56_RS14815;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=WP_000611911.1;transl_table=11
NZ_JJLS01000158.1	RefSeq	gene	6008	6523	.	-	.	ID=gene-AC56_RS14810;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=AC56_RS14810;old_locus_tag=AC56_1546
NZ_JJLS01000158.1	Protein Homology	CDS	6008	6523	.	-	0	ID=cds-WP_000945011.1;Parent=gene-AC56_RS14810;Dbxref=GenBank:WP_000945011.1;Name=WP_000945011.1;Ontology_term=GO:0006281,GO:0003908;gbkey=CDS;gene=ogt;go_function=methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415851.1;locus_tag=AC56_RS14810;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_000945011.1;transl_table=11
NZ_JJLS01000158.1	RefSeq	gene	6534	8060	.	-	.	ID=gene-AC56_RS14805;Name=abgT;gbkey=Gene;gene=abgT;gene_biotype=protein_coding;locus_tag=AC56_RS14805;old_locus_tag=AC56_1547
NZ_JJLS01000158.1	Protein Homology	CDS	6534	8060	.	-	0	ID=cds-WP_032278230.1;Parent=gene-AC56_RS14805;Dbxref=GenBank:WP_032278230.1;Name=WP_032278230.1;gbkey=CDS;gene=abgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415852.2;locus_tag=AC56_RS14805;product=p-aminobenzoyl-glutamate transporter;protein_id=WP_032278230.1;transl_table=11
NZ_JJLS01000158.1	RefSeq	gene	8094	9539	.	-	.	ID=gene-AC56_RS14800;Name=abgB;gbkey=Gene;gene=abgB;gene_biotype=protein_coding;locus_tag=AC56_RS14800;old_locus_tag=AC56_1548
NZ_JJLS01000158.1	Protein Homology	CDS	8094	9539	.	-	0	ID=cds-WP_001156412.1;Parent=gene-AC56_RS14800;Dbxref=GenBank:WP_001156412.1;Name=WP_001156412.1;gbkey=CDS;gene=abgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415853.1;locus_tag=AC56_RS14800;product=p-aminobenzoyl-glutamate hydrolase subunit AbgB;protein_id=WP_001156412.1;transl_table=11
NZ_JJLS01000158.1	RefSeq	gene	9539	10849	.	-	.	ID=gene-AC56_RS14795;Name=abgA;gbkey=Gene;gene=abgA;gene_biotype=protein_coding;locus_tag=AC56_RS14795;old_locus_tag=AC56_1549
NZ_JJLS01000158.1	Protein Homology	CDS	9539	10849	.	-	0	ID=cds-WP_032278231.1;Parent=gene-AC56_RS14795;Dbxref=GenBank:WP_032278231.1;Name=WP_032278231.1;gbkey=CDS;gene=abgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415854.4;locus_tag=AC56_RS14795;product=p-aminobenzoyl-glutamate hydrolase subunit AbgA;protein_id=WP_032278231.1;transl_table=11
NZ_JJLS01000158.1	RefSeq	gene	11025	11933	.	+	.	ID=gene-AC56_RS14790;Name=abgR;gbkey=Gene;gene=abgR;gene_biotype=protein_coding;locus_tag=AC56_RS14790;old_locus_tag=AC56_1550
NZ_JJLS01000158.1	Protein Homology	CDS	11025	11933	.	+	0	ID=cds-WP_000885454.1;Parent=gene-AC56_RS14790;Dbxref=GenBank:WP_000885454.1;Name=WP_000885454.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=abgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309950.1;locus_tag=AC56_RS14790;product=LysR family transcriptional regulator;protein_id=WP_000885454.1;transl_table=11
NZ_JJLS01000158.1	RefSeq	gene	12263	12826	.	+	.	ID=gene-AC56_RS14785;Name=smrA;gbkey=Gene;gene=smrA;gene_biotype=protein_coding;locus_tag=AC56_RS14785;old_locus_tag=AC56_1551
NZ_JJLS01000158.1	Protein Homology	CDS	12263	12826	.	+	0	ID=cds-WP_001046829.1;Parent=gene-AC56_RS14785;Dbxref=GenBank:WP_001046829.1;Name=WP_001046829.1;gbkey=CDS;gene=smrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415856.1;locus_tag=AC56_RS14785;product=DNA endonuclease SmrA;protein_id=WP_001046829.1;transl_table=11
NZ_JJLS01000158.1	RefSeq	gene	12847	14079	.	-	.	ID=gene-AC56_RS14780;Name=dgcM;gbkey=Gene;gene=dgcM;gene_biotype=protein_coding;locus_tag=AC56_RS14780;old_locus_tag=AC56_1552
NZ_JJLS01000158.1	Protein Homology	CDS	12847	14079	.	-	0	ID=cds-WP_000628058.1;Parent=gene-AC56_RS14780;Dbxref=GenBank:WP_000628058.1;Name=WP_000628058.1;gbkey=CDS;gene=dgcM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415857.2;locus_tag=AC56_RS14780;product=diguanylate cyclase DgcM;protein_id=WP_000628058.1;transl_table=11
NZ_JJLS01000158.1	RefSeq	gene	14273	14320	.	+	.	ID=gene-AC56_RS33285;Name=ydaN;gbkey=Gene;gene=ydaN;gene_biotype=protein_coding;locus_tag=AC56_RS33285
NZ_JJLS01000158.1	Protein Homology	CDS	14273	14320	.	+	0	ID=cds-WP_211180494.1;Parent=gene-AC56_RS33285;Dbxref=GenBank:WP_211180494.1;Name=WP_211180494.1;gbkey=CDS;gene=ydaN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051183.1;locus_tag=AC56_RS33285;product=protein YnaN;protein_id=WP_211180494.1;transl_table=11
NZ_JJLS01000158.1	RefSeq	gene	14334	15317	.	+	.	ID=gene-AC56_RS14775;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=AC56_RS14775;old_locus_tag=AC56_1553
NZ_JJLS01000158.1	Protein Homology	CDS	14334	15317	.	+	0	ID=cds-WP_000387388.1;Parent=gene-AC56_RS14775;Dbxref=GenBank:WP_000387388.1;Name=WP_000387388.1;Ontology_term=GO:0071577,GO:0005385,GO:0005886;gbkey=CDS;gene=zntB;go_component=plasma membrane|0005886||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transmembrane transport|0071577||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309953.1;locus_tag=AC56_RS14775;product=zinc transporter ZntB;protein_id=WP_000387388.1;transl_table=11
NZ_JJLS01000158.1	RefSeq	gene	15592	15765	.	+	.	ID=gene-AC56_RS33560;Name=ynaL;gbkey=Gene;gene=ynaL;gene_biotype=protein_coding;locus_tag=AC56_RS33560
NZ_JJLS01000158.1	Protein Homology	CDS	15592	15765	.	+	0	ID=cds-WP_001296046.1;Parent=gene-AC56_RS33560;Dbxref=GenBank:WP_001296046.1;Name=WP_001296046.1;gbkey=CDS;gene=ynaL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518775.1;locus_tag=AC56_RS33560;product=protein YnaL;protein_id=WP_001296046.1;transl_table=11
NZ_JJLS01000158.1	RefSeq	gene	15795	17168	.	+	.	ID=gene-AC56_RS14770;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=AC56_RS14770;old_locus_tag=AC56_1554
NZ_JJLS01000158.1	Protein Homology	CDS	15795	17168	.	+	0	ID=cds-WP_000123737.1;Parent=gene-AC56_RS14770;Dbxref=GenBank:WP_000123737.1;Name=WP_000123737.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415859.1;locus_tag=AC56_RS14770;product=ATP-dependent RNA helicase DbpA;protein_id=WP_000123737.1;transl_table=11
NZ_JJLS01000158.1	RefSeq	gene	17297	18232	.	-	.	ID=gene-AC56_RS14765;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=AC56_RS14765;old_locus_tag=AC56_1555
NZ_JJLS01000158.1	Protein Homology	CDS	17297	18232	.	-	0	ID=cds-WP_001157407.1;Parent=gene-AC56_RS14765;Dbxref=GenBank:WP_001157407.1;Name=WP_001157407.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309955.1;locus_tag=AC56_RS14765;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_001157407.1;transl_table=11
NZ_JJLS01000158.1	RefSeq	pseudogene	18284	18586	.	-	.	ID=gene-AC56_RS29235;Name=AC56_RS29235;end_range=18586,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS29235;partial=true;pseudo=true
NZ_JJLS01000158.1	Protein Homology	CDS	18284	18586	.	-	0	ID=cds-AC56_RS29235;Parent=gene-AC56_RS29235;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=18586,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309956.1;locus_tag=AC56_RS29235;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11
NZ_JJLS01000158.1	RefSeq	pseudogene	18642	19003	.	+	.	ID=gene-AC56_RS0125790;Name=AC56_RS0125790;end_range=19003,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0125790;partial=true;pseudo=true
NZ_JJLS01000158.1	Protein Homology	CDS	18642	19003	.	+	0	ID=cds-AC56_RS0125790;Parent=gene-AC56_RS0125790;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=19003,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS0125790;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000159.1 1 11074
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000159.1	RefSeq	region	1	11074	.	+	.	ID=NZ_JJLS01000159.1:1..11074;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000159.1	RefSeq	gene	27	1160	.	-	.	ID=gene-AC56_RS14755;Name=ompN;gbkey=Gene;gene=ompN;gene_biotype=protein_coding;locus_tag=AC56_RS14755;old_locus_tag=AC56_1558
NZ_JJLS01000159.1	Protein Homology	CDS	27	1160	.	-	0	ID=cds-WP_032278234.1;Parent=gene-AC56_RS14755;Dbxref=GenBank:WP_032278234.1;Name=WP_032278234.1;gbkey=CDS;gene=ompN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415895.1;locus_tag=AC56_RS14755;product=porin OmpN;protein_id=WP_032278234.1;transl_table=11
NZ_JJLS01000159.1	RefSeq	gene	1527	5051	.	-	.	ID=gene-AC56_RS14750;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=AC56_RS14750;old_locus_tag=AC56_1559
NZ_JJLS01000159.1	Protein Homology	CDS	1527	5051	.	-	0	ID=cds-WP_032278235.1;Parent=gene-AC56_RS14750;Dbxref=GenBank:WP_032278235.1;Name=WP_032278235.1;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415896.1;locus_tag=AC56_RS14750;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=WP_032278235.1;transl_table=11
NZ_JJLS01000159.1	RefSeq	gene	5325	5591	.	+	.	ID=gene-AC56_RS0125795;Name=AC56_RS0125795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0125795
NZ_JJLS01000159.1	Protein Homology	CDS	5325	5591	.	+	0	ID=cds-WP_001295715.1;Parent=gene-AC56_RS0125795;Dbxref=GenBank:WP_001295715.1;Name=WP_001295715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588453.1;locus_tag=AC56_RS0125795;product=putative hemolysin;protein_id=WP_001295715.1;transl_table=11
NZ_JJLS01000159.1	RefSeq	gene	5588	6010	.	-	.	ID=gene-AC56_RS14745;Name=hslJ;gbkey=Gene;gene=hslJ;gene_biotype=protein_coding;locus_tag=AC56_RS14745;old_locus_tag=AC56_1561
NZ_JJLS01000159.1	Protein Homology	CDS	5588	6010	.	-	0	ID=cds-WP_001296048.1;Parent=gene-AC56_RS14745;Dbxref=GenBank:WP_001296048.1;Name=WP_001296048.1;gbkey=CDS;gene=hslJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415897.1;locus_tag=AC56_RS14745;product=heat shock protein HslJ;protein_id=WP_001296048.1;transl_table=11
NZ_JJLS01000159.1	RefSeq	gene	6121	7110	.	-	.	ID=gene-AC56_RS14740;Name=ldhA;gbkey=Gene;gene=ldhA;gene_biotype=protein_coding;locus_tag=AC56_RS14740;old_locus_tag=AC56_1562
NZ_JJLS01000159.1	Protein Homology	CDS	6121	7110	.	-	0	ID=cds-WP_000762229.1;Parent=gene-AC56_RS14740;Dbxref=GenBank:WP_000762229.1;Name=WP_000762229.1;gbkey=CDS;gene=ldhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310029.1;locus_tag=AC56_RS14740;product=D-lactate dehydrogenase;protein_id=WP_000762229.1;transl_table=11
NZ_JJLS01000159.1	RefSeq	gene	7318	9957	.	+	.	ID=gene-AC56_RS14735;Name=AC56_RS14735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS14735;old_locus_tag=AC56_1563
NZ_JJLS01000159.1	Protein Homology	CDS	7318	9957	.	+	0	ID=cds-WP_000900976.1;Parent=gene-AC56_RS14735;Dbxref=GenBank:WP_000900976.1;Name=WP_000900976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415899.1;locus_tag=AC56_RS14735;product=YdbH family protein;protein_id=WP_000900976.1;transl_table=11
NZ_JJLS01000159.1	RefSeq	gene	9954	10139	.	+	.	ID=gene-AC56_RS14730;Name=AC56_RS14730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS14730;old_locus_tag=AC56_1564
NZ_JJLS01000159.1	Protein Homology	CDS	9954	10139	.	+	0	ID=cds-WP_000698145.1;Parent=gene-AC56_RS14730;Dbxref=GenBank:WP_000698145.1;Name=WP_000698145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415900.1;locus_tag=AC56_RS14730;product=YnbE family lipoprotein;protein_id=WP_000698145.1;transl_table=11
NZ_JJLS01000159.1	RefSeq	gene	10147	10473	.	+	.	ID=gene-AC56_RS14725;Name=AC56_RS14725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS14725;old_locus_tag=AC56_1565
NZ_JJLS01000159.1	Protein Homology	CDS	10147	10473	.	+	0	ID=cds-WP_001300734.1;Parent=gene-AC56_RS14725;Dbxref=GenBank:WP_001300734.1;Name=WP_001300734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415901.2;locus_tag=AC56_RS14725;product=YdbL family protein;protein_id=WP_001300734.1;transl_table=11
NZ_JJLS01000159.1	RefSeq	gene	10678	11074	.	-	.	ID=gene-AC56_RS14720;Name=AC56_RS14720;end_range=11074,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS14720;old_locus_tag=AC56_1566;partial=true
NZ_JJLS01000159.1	Protein Homology	CDS	10678	11074	.	-	1	ID=cds-WP_032282618.1-2;Parent=gene-AC56_RS14720;Dbxref=GenBank:WP_032282618.1;Name=WP_032282618.1;Ontology_term=GO:0004803;end_range=11074,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS14720;partial=true;product=IS1 family transposase;protein_id=WP_032282618.1;transl_table=11
##sequence-region NZ_JJLS01000160.1 1 25980
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000160.1	RefSeq	region	1	25980	.	+	.	ID=NZ_JJLS01000160.1:1..25980;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000160.1	RefSeq	pseudogene	1	529	.	-	.	ID=gene-AC56_RS31205;Name=AC56_RS31205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS31205;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000160.1	Protein Homology	CDS	1	529	.	-	0	ID=cds-AC56_RS31205;Parent=gene-AC56_RS31205;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558270.1;locus_tag=AC56_RS31205;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000160.1	RefSeq	pseudogene	579	768	.	+	.	ID=gene-AC56_RS29245;Name=AC56_RS29245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS29245;old_locus_tag=AC56_1568;partial=true;pseudo=true;start_range=.,579
NZ_JJLS01000160.1	Protein Homology	CDS	579	768	.	+	0	ID=cds-AC56_RS29245;Parent=gene-AC56_RS29245;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415927.1;locus_tag=AC56_RS29245;partial=true;product=phosphatidate cytidylyltransferase;pseudo=true;start_range=.,579;transl_table=11
NZ_JJLS01000160.1	RefSeq	gene	784	2541	.	+	.	ID=gene-AC56_RS14710;Name=ynbC;gbkey=Gene;gene=ynbC;gene_biotype=protein_coding;locus_tag=AC56_RS14710;old_locus_tag=AC56_1569
NZ_JJLS01000160.1	Protein Homology	CDS	784	2541	.	+	0	ID=cds-WP_000431845.1;Parent=gene-AC56_RS14710;Dbxref=GenBank:WP_000431845.1;Name=WP_000431845.1;Ontology_term=GO:0008168,GO:0016787,GO:1904047;gbkey=CDS;gene=ynbC;go_function=methyltransferase activity|0008168||IEA,hydrolase activity|0016787||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415928.1;locus_tag=AC56_RS14710;product=bifunctional alpha/beta hydrolase/class I SAM-dependent methyltransferase;protein_id=WP_000431845.1;transl_table=11
NZ_JJLS01000160.1	RefSeq	gene	2531	3847	.	+	.	ID=gene-AC56_RS14705;Name=ynbD;gbkey=Gene;gene=ynbD;gene_biotype=protein_coding;locus_tag=AC56_RS14705;old_locus_tag=AC56_1570
NZ_JJLS01000160.1	Protein Homology	CDS	2531	3847	.	+	0	ID=cds-WP_000627365.1;Parent=gene-AC56_RS14705;Dbxref=GenBank:WP_000627365.1;Name=WP_000627365.1;gbkey=CDS;gene=ynbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310040.2;locus_tag=AC56_RS14705;product=phosphatase PAP2/dual specificity phosphatase family protein;protein_id=WP_000627365.1;transl_table=11
NZ_JJLS01000160.1	RefSeq	gene	3898	4503	.	-	.	ID=gene-AC56_RS14700;Name=azoR;gbkey=Gene;gene=azoR;gene_biotype=protein_coding;locus_tag=AC56_RS14700;old_locus_tag=AC56_1571
NZ_JJLS01000160.1	Protein Homology	CDS	3898	4503	.	-	0	ID=cds-WP_000048951.1;Parent=gene-AC56_RS14700;Dbxref=GenBank:WP_000048951.1;Name=WP_000048951.1;gbkey=CDS;gene=azoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310041.1;locus_tag=AC56_RS14700;product=FMN-dependent NADH-azoreductase;protein_id=WP_000048951.1;transl_table=11
NZ_JJLS01000160.1	RefSeq	gene	4704	8606	.	+	.	ID=gene-AC56_RS14695;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=AC56_RS14695;old_locus_tag=AC56_1572
NZ_JJLS01000160.1	Protein Homology	CDS	4704	8606	.	+	0	ID=cds-WP_032282654.1;Parent=gene-AC56_RS14695;Dbxref=GenBank:WP_032282654.1;Name=WP_032282654.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=hrpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415931.4;locus_tag=AC56_RS14695;product=ATP-dependent RNA helicase HrpA;protein_id=WP_032282654.1;transl_table=11
NZ_JJLS01000160.1	RefSeq	gene	8878	9678	.	+	.	ID=gene-AC56_RS14690;Name=ydcF;gbkey=Gene;gene=ydcF;gene_biotype=protein_coding;locus_tag=AC56_RS14690;old_locus_tag=AC56_1574
NZ_JJLS01000160.1	Protein Homology	CDS	8878	9678	.	+	0	ID=cds-WP_032278238.1;Parent=gene-AC56_RS14690;Dbxref=GenBank:WP_032278238.1;Name=WP_032278238.1;gbkey=CDS;gene=ydcF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415932.1;locus_tag=AC56_RS14690;product=DUF218 domain-containing protein YdcF;protein_id=WP_032278238.1;transl_table=11
NZ_JJLS01000160.1	RefSeq	gene	9875	11314	.	+	.	ID=gene-AC56_RS14685;Name=aldA;gbkey=Gene;gene=aldA;gene_biotype=protein_coding;locus_tag=AC56_RS14685;old_locus_tag=AC56_1575
NZ_JJLS01000160.1	Protein Homology	CDS	9875	11314	.	+	0	ID=cds-WP_032278239.1;Parent=gene-AC56_RS14685;Dbxref=GenBank:WP_032278239.1;Name=WP_032278239.1;Ontology_term=GO:0016620;gbkey=CDS;gene=aldA;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310048.1;locus_tag=AC56_RS14685;product=aldehyde dehydrogenase;protein_id=WP_032278239.1;transl_table=11
NZ_JJLS01000160.1	RefSeq	gene	11356	12357	.	-	.	ID=gene-AC56_RS14680;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=AC56_RS14680;old_locus_tag=AC56_1576
NZ_JJLS01000160.1	Protein Homology	CDS	11356	12357	.	-	0	ID=cds-WP_000048667.1;Parent=gene-AC56_RS14680;Dbxref=GenBank:WP_000048667.1;Name=WP_000048667.1;Ontology_term=GO:0006006,GO:0016620,GO:0050661,GO:0051287;gbkey=CDS;gene=gap;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310049.1;locus_tag=AC56_RS14680;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_000048667.1;transl_table=11
NZ_JJLS01000160.1	RefSeq	gene	12546	13076	.	+	.	ID=gene-AC56_RS14675;Name=cybB;gbkey=Gene;gene=cybB;gene_biotype=protein_coding;locus_tag=AC56_RS14675;old_locus_tag=AC56_1577
NZ_JJLS01000160.1	Protein Homology	CDS	12546	13076	.	+	0	ID=cds-WP_001307188.1;Parent=gene-AC56_RS14675;Dbxref=GenBank:WP_001307188.1;Name=WP_001307188.1;Ontology_term=GO:0022904,GO:0009055,GO:0016020;gbkey=CDS;gene=cybB;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415935.2;locus_tag=AC56_RS14675;product=cytochrome b561;protein_id=WP_001307188.1;transl_table=11
NZ_JJLS01000160.1	RefSeq	gene	13321	13494	.	+	.	ID=gene-AC56_RS14670;Name=AC56_RS14670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS14670;old_locus_tag=AC56_1578
NZ_JJLS01000160.1	Protein Homology	CDS	13321	13494	.	+	0	ID=cds-WP_000731833.1;Parent=gene-AC56_RS14670;Dbxref=GenBank:WP_000731833.1;Name=WP_000731833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415936.1;locus_tag=AC56_RS14670;product=periplasmic protein;protein_id=WP_000731833.1;transl_table=11
NZ_JJLS01000160.1	RefSeq	gene	13520	13588	.	+	.	ID=gene-AC56_RS33290;Name=yncP;gbkey=Gene;gene=yncP;gene_biotype=protein_coding;locus_tag=AC56_RS33290
NZ_JJLS01000160.1	Protein Homology	CDS	13520	13588	.	+	0	ID=cds-WP_212591405.1;Parent=gene-AC56_RS33290;Dbxref=GenBank:WP_212591405.1;Name=WP_212591405.1;gbkey=CDS;gene=yncP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051184.1;locus_tag=AC56_RS33290;product=hypothetical protein;protein_id=WP_212591405.1;transl_table=11
NZ_JJLS01000160.1	RefSeq	gene	13566	13715	.	-	.	ID=gene-AC56_RS0125805;Name=hokB;gbkey=Gene;gene=hokB;gene_biotype=protein_coding;locus_tag=AC56_RS0125805
NZ_JJLS01000160.1	Protein Homology	CDS	13566	13715	.	-	0	ID=cds-WP_032278241.1;Parent=gene-AC56_RS0125805;Dbxref=GenBank:WP_032278241.1;Name=WP_032278241.1;gbkey=CDS;gene=hokB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025301.1;locus_tag=AC56_RS0125805;product=type I toxin-antitoxin system toxin HokB;protein_id=WP_032278241.1;transl_table=11
NZ_JJLS01000160.1	RefSeq	pseudogene	14114	15754	.	+	.	ID=gene-AC56_RS0125810;Name=trg;gbkey=Gene;gene=trg;gene_biotype=pseudogene;locus_tag=AC56_RS0125810;pseudo=true
NZ_JJLS01000160.1	Protein Homology	CDS	14114	15754	.	+	0	ID=cds-AC56_RS0125810;Parent=gene-AC56_RS0125810;Note=internal stop;gbkey=CDS;gene=trg;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415938.1;locus_tag=AC56_RS0125810;product=methyl-accepting chemotaxis protein Trg;pseudo=true;transl_table=11
NZ_JJLS01000160.1	RefSeq	gene	15792	16715	.	-	.	ID=gene-AC56_RS14665;Name=ydcI;gbkey=Gene;gene=ydcI;gene_biotype=protein_coding;locus_tag=AC56_RS14665;old_locus_tag=AC56_1581
NZ_JJLS01000160.1	Protein Homology	CDS	15792	16715	.	-	0	ID=cds-WP_000414567.1;Parent=gene-AC56_RS14665;Dbxref=GenBank:WP_000414567.1;Name=WP_000414567.1;gbkey=CDS;gene=ydcI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415939.2;locus_tag=AC56_RS14665;product=LysR substrate-binding domain-containing protein;protein_id=WP_000414567.1;transl_table=11
NZ_JJLS01000160.1	RefSeq	gene	16932	18275	.	+	.	ID=gene-AC56_RS14660;Name=hglS;gbkey=Gene;gene=hglS;gene_biotype=protein_coding;gene_synonym=ydcJ;locus_tag=AC56_RS14660;old_locus_tag=AC56_1582
NZ_JJLS01000160.1	Protein Homology	CDS	16932	18275	.	+	0	ID=cds-WP_000013789.1;Parent=gene-AC56_RS14660;Dbxref=GenBank:WP_000013789.1;Name=WP_000013789.1;Ontology_term=GO:0051213;gbkey=CDS;gene=hglS;go_function=dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415940.1;locus_tag=AC56_RS14660;product=2-oxoadipate dioxygenase/decarboxylase HglS;protein_id=WP_000013789.1;transl_table=11
NZ_JJLS01000160.1	RefSeq	gene	18500	20155	.	+	.	ID=gene-AC56_RS14655;Name=opgD;gbkey=Gene;gene=opgD;gene_biotype=protein_coding;gene_synonym=mdoD;locus_tag=AC56_RS14655;old_locus_tag=AC56_1583
NZ_JJLS01000160.1	Protein Homology	CDS	18500	20155	.	+	0	ID=cds-WP_000375956.1;Parent=gene-AC56_RS14655;Dbxref=GenBank:WP_000375956.1;Name=WP_000375956.1;gbkey=CDS;gene=opgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707648.1;locus_tag=AC56_RS14655;product=glucan biosynthesis protein OpgD;protein_id=WP_000375956.1;transl_table=11
NZ_JJLS01000160.1	RefSeq	gene	20295	20519	.	+	.	ID=gene-AC56_RS14650;Name=ydcH;gbkey=Gene;gene=ydcH;gene_biotype=protein_coding;locus_tag=AC56_RS14650;old_locus_tag=AC56_1584
NZ_JJLS01000160.1	Protein Homology	CDS	20295	20519	.	+	0	ID=cds-WP_001296778.1;Parent=gene-AC56_RS14650;Dbxref=GenBank:WP_001296778.1;Name=WP_001296778.1;gbkey=CDS;gene=ydcH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415943.4;locus_tag=AC56_RS14650;product=YdcH family protein;protein_id=WP_001296778.1;transl_table=11
NZ_JJLS01000160.1	RefSeq	gene	20582	21121	.	+	.	ID=gene-AC56_RS14645;Name=rimL;gbkey=Gene;gene=rimL;gene_biotype=protein_coding;locus_tag=AC56_RS14645;old_locus_tag=AC56_1585
NZ_JJLS01000160.1	Protein Homology	CDS	20582	21121	.	+	0	ID=cds-WP_032278242.1;Parent=gene-AC56_RS14645;Dbxref=GenBank:WP_032278242.1;Name=WP_032278242.1;gbkey=CDS;gene=rimL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415944.1;locus_tag=AC56_RS14645;product=50S ribosomal protein L7/L12-serine acetyltransferase;protein_id=WP_032278242.1;transl_table=11
NZ_JJLS01000160.1	RefSeq	gene	21113	22093	.	-	.	ID=gene-AC56_RS14640;Name=ydcK;gbkey=Gene;gene=ydcK;gene_biotype=protein_coding;locus_tag=AC56_RS14640;old_locus_tag=AC56_1586
NZ_JJLS01000160.1	Protein Homology	CDS	21113	22093	.	-	0	ID=cds-WP_001234023.1;Parent=gene-AC56_RS14640;Dbxref=GenBank:WP_001234023.1;Name=WP_001234023.1;gbkey=CDS;gene=ydcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310060.1;locus_tag=AC56_RS14640;product=YdcK family protein;protein_id=WP_001234023.1;transl_table=11
NZ_JJLS01000160.1	RefSeq	gene	22217	23209	.	+	.	ID=gene-AC56_RS14635;Name=tehA;gbkey=Gene;gene=tehA;gene_biotype=protein_coding;locus_tag=AC56_RS14635;old_locus_tag=AC56_1587
NZ_JJLS01000160.1	Protein Homology	CDS	22217	23209	.	+	0	ID=cds-WP_001300478.1;Parent=gene-AC56_RS14635;Dbxref=GenBank:WP_001300478.1;Name=WP_001300478.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=tehA;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310061.1;locus_tag=AC56_RS14635;product=dicarboxylate transporter/tellurite-resistance protein TehA;protein_id=WP_001300478.1;transl_table=11
NZ_JJLS01000160.1	RefSeq	gene	23206	23799	.	+	.	ID=gene-AC56_RS14630;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=AC56_RS14630;old_locus_tag=AC56_1588
NZ_JJLS01000160.1	Protein Homology	CDS	23206	23799	.	+	0	ID=cds-WP_000587030.1;Parent=gene-AC56_RS14630;Dbxref=GenBank:WP_000587030.1;Name=WP_000587030.1;Ontology_term=GO:0046690,GO:0008757;gbkey=CDS;gene=tehB;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310062.1;locus_tag=AC56_RS14630;product=tellurite resistance methyltransferase TehB;protein_id=WP_000587030.1;transl_table=11
NZ_JJLS01000160.1	RefSeq	gene	24102	24770	.	+	.	ID=gene-AC56_RS14625;Name=ydcL;gbkey=Gene;gene=ydcL;gene_biotype=protein_coding;locus_tag=AC56_RS14625;old_locus_tag=AC56_1590
NZ_JJLS01000160.1	Protein Homology	CDS	24102	24770	.	+	0	ID=cds-WP_001261013.1;Parent=gene-AC56_RS14625;Dbxref=GenBank:WP_001261013.1;Name=WP_001261013.1;gbkey=CDS;gene=ydcL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310063.1;locus_tag=AC56_RS14625;product=DUF3313 domain-containing protein;protein_id=WP_001261013.1;transl_table=11
NZ_JJLS01000160.1	RefSeq	pseudogene	24869	25294	.	-	.	ID=gene-AC56_RS0125820;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=AC56_RS0125820;partial=true;pseudo=true;start_range=.,24869
NZ_JJLS01000160.1	Protein Homology	CDS	24869	25294	.	-	0	ID=cds-AC56_RS0125820;Parent=gene-AC56_RS0125820;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313209.1;locus_tag=AC56_RS0125820;partial=true;product=IS200/IS605 family transposase;pseudo=true;start_range=.,24869;transl_table=11
NZ_JJLS01000160.1	RefSeq	gene	25302	25980	.	+	.	ID=gene-AC56_RS14620;Name=AC56_RS14620;end_range=25980,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS14620;old_locus_tag=AC56_1594;partial=true
NZ_JJLS01000160.1	Protein Homology	CDS	25302	25980	.	+	0	ID=cds-WP_077756661.1;Parent=gene-AC56_RS14620;Dbxref=GenBank:WP_077756661.1;Name=WP_077756661.1;Ontology_term=GO:0006310,GO:0032196,GO:0003677,GO:0004519,GO:0046872;end_range=25980,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415949.3;locus_tag=AC56_RS14620;partial=true;product=RNA-guided endonuclease InsQ/TnpB family protein;protein_id=WP_077756661.1;transl_table=11
##sequence-region NZ_JJLS01000161.1 1 14589
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000161.1	RefSeq	region	1	14589	.	+	.	ID=NZ_JJLS01000161.1:1..14589;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000161.1	RefSeq	gene	1	231	.	+	.	ID=gene-AC56_RS14615;Name=AC56_RS14615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS14615;old_locus_tag=AC56_1595;partial=true;start_range=.,1
NZ_JJLS01000161.1	Protein Homology	CDS	1	231	.	+	0	ID=cds-WP_001352175.1;Parent=gene-AC56_RS14615;Dbxref=GenBank:WP_001352175.1;Name=WP_001352175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS14615;partial=true;product=IS4 family transposase;protein_id=WP_001352175.1;start_range=.,1;transl_table=11
NZ_JJLS01000161.1	RefSeq	pseudogene	426	856	.	-	.	ID=gene-AC56_RS32110;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=AC56_RS32110;pseudo=true
NZ_JJLS01000161.1	Protein Homology	CDS	426	856	.	-	0	ID=cds-AC56_RS32110;Parent=gene-AC56_RS32110;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313209.1;locus_tag=AC56_RS32110;product=IS200/IS605 family transposase;pseudo=true;transl_table=11
NZ_JJLS01000161.1	RefSeq	pseudogene	864	2072	.	+	.	ID=gene-AC56_RS0125830;Name=AC56_RS0125830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0125830;old_locus_tag=AC56_1599;pseudo=true
NZ_JJLS01000161.1	Protein Homology	CDS	864	2072	.	+	0	ID=cds-AC56_RS0125830;Parent=gene-AC56_RS0125830;Note=internal stop;Ontology_term=GO:0006310,GO:0032196,GO:0003677,GO:0004519,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415949.3;locus_tag=AC56_RS0125830;product=RNA-guided endonuclease InsQ/TnpB family protein;pseudo=true;transl_table=11
NZ_JJLS01000161.1	RefSeq	gene	2112	3326	.	-	.	ID=gene-AC56_RS14610;Name=ydcO;gbkey=Gene;gene=ydcO;gene_biotype=protein_coding;locus_tag=AC56_RS14610;old_locus_tag=AC56_1600
NZ_JJLS01000161.1	Protein Homology	CDS	2112	3326	.	-	0	ID=cds-WP_071999475.1;Parent=gene-AC56_RS14610;Dbxref=GenBank:WP_071999475.1;Name=WP_071999475.1;gbkey=CDS;gene=ydcO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748359.1;locus_tag=AC56_RS14610;product=BenE family transporter YdcO;protein_id=WP_071999475.1;transl_table=11
NZ_JJLS01000161.1	RefSeq	gene	3379	3915	.	+	.	ID=gene-AC56_RS14605;Name=sutR;gbkey=Gene;gene=sutR;gene_biotype=protein_coding;locus_tag=AC56_RS14605;old_locus_tag=AC56_1601
NZ_JJLS01000161.1	Protein Homology	CDS	3379	3915	.	+	0	ID=cds-WP_000429150.1;Parent=gene-AC56_RS14605;Dbxref=GenBank:WP_000429150.1;Name=WP_000429150.1;gbkey=CDS;gene=sutR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415951.1;locus_tag=AC56_RS14605;product=DNA-binding transcriptional regulator SutR;protein_id=WP_000429150.1;transl_table=11
NZ_JJLS01000161.1	RefSeq	gene	3988	5949	.	+	.	ID=gene-AC56_RS14600;Name=rlhA;gbkey=Gene;gene=rlhA;gene_biotype=protein_coding;locus_tag=AC56_RS14600;old_locus_tag=AC56_1602
NZ_JJLS01000161.1	Protein Homology	CDS	3988	5949	.	+	0	ID=cds-WP_001383134.1;Parent=gene-AC56_RS14600;Dbxref=GenBank:WP_001383134.1;Name=WP_001383134.1;gbkey=CDS;gene=rlhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415952.2;locus_tag=AC56_RS14600;product=23S rRNA 5-hydroxycytidine C2501 synthase;protein_id=WP_001383134.1;transl_table=11
NZ_JJLS01000161.1	RefSeq	gene	6041	6271	.	-	.	ID=gene-AC56_RS14595;Name=yncJ;gbkey=Gene;gene=yncJ;gene_biotype=protein_coding;locus_tag=AC56_RS14595;old_locus_tag=AC56_1603
NZ_JJLS01000161.1	Protein Homology	CDS	6041	6271	.	-	0	ID=cds-WP_000494244.1;Parent=gene-AC56_RS14595;Dbxref=GenBank:WP_000494244.1;Name=WP_000494244.1;gbkey=CDS;gene=yncJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415953.1;locus_tag=AC56_RS14595;product=YncJ family protein;protein_id=WP_000494244.1;transl_table=11
NZ_JJLS01000161.1	RefSeq	gene	6493	6669	.	+	.	ID=gene-AC56_RS0125835;Name=hicA;gbkey=Gene;gene=hicA;gene_biotype=protein_coding;locus_tag=AC56_RS0125835
NZ_JJLS01000161.1	Protein Homology	CDS	6493	6669	.	+	0	ID=cds-WP_000813794.1;Parent=gene-AC56_RS0125835;Dbxref=GenBank:WP_000813794.1;Name=WP_000813794.1;gbkey=CDS;gene=hicA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415954.2;locus_tag=AC56_RS0125835;product=type II toxin-antitoxin system mRNA interferase toxin HicA;protein_id=WP_000813794.1;transl_table=11
NZ_JJLS01000161.1	RefSeq	gene	6715	7131	.	+	.	ID=gene-AC56_RS14590;Name=hicB;gbkey=Gene;gene=hicB;gene_biotype=protein_coding;locus_tag=AC56_RS14590;old_locus_tag=AC56_1606
NZ_JJLS01000161.1	Protein Homology	CDS	6715	7131	.	+	0	ID=cds-WP_001270286.1;Parent=gene-AC56_RS14590;Dbxref=GenBank:WP_001270286.1;Name=WP_001270286.1;gbkey=CDS;gene=hicB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415955.2;locus_tag=AC56_RS14590;product=type II toxin-antitoxin system antitoxin HicB;protein_id=WP_001270286.1;transl_table=11
NZ_JJLS01000161.1	RefSeq	gene	7210	8616	.	+	.	ID=gene-AC56_RS14585;Name=ydcR;gbkey=Gene;gene=ydcR;gene_biotype=protein_coding;locus_tag=AC56_RS14585;old_locus_tag=AC56_1607
NZ_JJLS01000161.1	Protein Homology	CDS	7210	8616	.	+	0	ID=cds-WP_000760626.1;Parent=gene-AC56_RS14585;Dbxref=GenBank:WP_000760626.1;Name=WP_000760626.1;Ontology_term=GO:0030170;gbkey=CDS;gene=ydcR;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415956.1;locus_tag=AC56_RS14585;product=PLP-dependent aminotransferase family protein;protein_id=WP_000760626.1;transl_table=11
NZ_JJLS01000161.1	RefSeq	gene	8861	10006	.	+	.	ID=gene-AC56_RS14580;Name=ydcS;gbkey=Gene;gene=ydcS;gene_biotype=protein_coding;locus_tag=AC56_RS14580;old_locus_tag=AC56_1608
NZ_JJLS01000161.1	Protein Homology	CDS	8861	10006	.	+	0	ID=cds-WP_000047424.1;Parent=gene-AC56_RS14580;Dbxref=GenBank:WP_000047424.1;Name=WP_000047424.1;gbkey=CDS;gene=ydcS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415957.1;locus_tag=AC56_RS14580;product=putative ABC transporter substrate-binding protein YdcS;protein_id=WP_000047424.1;transl_table=11
NZ_JJLS01000161.1	RefSeq	gene	10024	11037	.	+	.	ID=gene-AC56_RS14575;Name=ydcT;gbkey=Gene;gene=ydcT;gene_biotype=protein_coding;locus_tag=AC56_RS14575;old_locus_tag=AC56_1609
NZ_JJLS01000161.1	Protein Homology	CDS	10024	11037	.	+	0	ID=cds-WP_032278247.1;Parent=gene-AC56_RS14575;Dbxref=GenBank:WP_032278247.1;Name=WP_032278247.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=ydcT;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415958.1;locus_tag=AC56_RS14575;product=ABC transporter ATP-binding protein;protein_id=WP_032278247.1;transl_table=11
NZ_JJLS01000161.1	RefSeq	gene	11038	11862	.	+	.	ID=gene-AC56_RS14570;Name=AC56_RS14570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS14570;old_locus_tag=AC56_1610
NZ_JJLS01000161.1	Protein Homology	CDS	11038	11862	.	+	0	ID=cds-WP_032278248.1;Parent=gene-AC56_RS14570;Dbxref=GenBank:WP_032278248.1;Name=WP_032278248.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415959.1;locus_tag=AC56_RS14570;product=ABC transporter permease;protein_id=WP_032278248.1;transl_table=11
NZ_JJLS01000161.1	RefSeq	gene	11852	12646	.	+	.	ID=gene-AC56_RS14565;Name=ydcV;gbkey=Gene;gene=ydcV;gene_biotype=protein_coding;locus_tag=AC56_RS14565;old_locus_tag=AC56_1611
NZ_JJLS01000161.1	Protein Homology	CDS	11852	12646	.	+	0	ID=cds-WP_000555458.1;Parent=gene-AC56_RS14565;Dbxref=GenBank:WP_000555458.1;Name=WP_000555458.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=ydcV;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415960.1;locus_tag=AC56_RS14565;product=ABC transporter permease;protein_id=WP_000555458.1;transl_table=11
NZ_JJLS01000161.1	RefSeq	gene	12668	14092	.	+	.	ID=gene-AC56_RS14560;Name=patD;gbkey=Gene;gene=patD;gene_biotype=protein_coding;locus_tag=AC56_RS14560;old_locus_tag=AC56_1612
NZ_JJLS01000161.1	Protein Homology	CDS	12668	14092	.	+	0	ID=cds-WP_001163874.1;Parent=gene-AC56_RS14560;Dbxref=GenBank:WP_001163874.1;Name=WP_001163874.1;Ontology_term=GO:0009447,GO:0019145,GO:0051287;gbkey=CDS;gene=patD;go_function=aminobutyraldehyde dehydrogenase (NAD+) activity|0019145||IEA,NAD binding|0051287||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415961.1;locus_tag=AC56_RS14560;product=aminobutyraldehyde dehydrogenase;protein_id=WP_001163874.1;transl_table=11
NZ_JJLS01000161.1	RefSeq	gene	14189	14257	.	-	.	ID=gene-AC56_RS29260;Name=yncL;gbkey=Gene;gene=yncL;gene_biotype=protein_coding;locus_tag=AC56_RS29260
NZ_JJLS01000161.1	Protein Homology	CDS	14189	14257	.	-	0	ID=cds-WP_071998946.1;Parent=gene-AC56_RS29260;Dbxref=GenBank:WP_071998946.1;Name=WP_071998946.1;gbkey=CDS;gene=yncL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165318.1;locus_tag=AC56_RS29260;product=stress response membrane protein YncL;protein_id=WP_071998946.1;transl_table=11
NZ_JJLS01000161.1	RefSeq	pseudogene	14297	14589	.	-	.	ID=gene-AC56_RS14555;Name=AC56_RS14555;end_range=14589,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS14555;old_locus_tag=AC56_1613;partial=true;pseudo=true
NZ_JJLS01000161.1	Protein Homology	CDS	14297	14589	.	-	2	ID=cds-AC56_RS14555;Parent=gene-AC56_RS14555;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=14589,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS14555;partial=true;product=IS1-like element IS1X2 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000162.1 1 11245
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000162.1	RefSeq	region	1	11245	.	+	.	ID=NZ_JJLS01000162.1:1..11245;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000162.1	RefSeq	pseudogene	1	401	.	-	.	ID=gene-AC56_RS0125850;Name=AC56_RS0125850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0125850;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000162.1	Protein Homology	CDS	1	401	.	-	0	ID=cds-AC56_RS0125850;Parent=gene-AC56_RS0125850;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS0125850;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000162.1	RefSeq	gene	662	835	.	+	.	ID=gene-AC56_RS0125855;Name=ortT;gbkey=Gene;gene=ortT;gene_biotype=protein_coding;locus_tag=AC56_RS0125855;old_locus_tag=AC56_1615
NZ_JJLS01000162.1	Protein Homology	CDS	662	835	.	+	0	ID=cds-WP_000061178.1;Parent=gene-AC56_RS0125855;Dbxref=GenBank:WP_000061178.1;Name=WP_000061178.1;gbkey=CDS;gene=ortT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415962.2;locus_tag=AC56_RS0125855;product=orphan toxin OrtT;protein_id=WP_000061178.1;transl_table=11
NZ_JJLS01000162.1	RefSeq	gene	921	1154	.	+	.	ID=gene-AC56_RS14550;Name=ydcY;gbkey=Gene;gene=ydcY;gene_biotype=protein_coding;locus_tag=AC56_RS14550;old_locus_tag=AC56_1616
NZ_JJLS01000162.1	Protein Homology	CDS	921	1154	.	+	0	ID=cds-WP_000018633.1;Parent=gene-AC56_RS14550;Dbxref=GenBank:WP_000018633.1;Name=WP_000018633.1;gbkey=CDS;gene=ydcY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310077.1;locus_tag=AC56_RS14550;product=DUF2526 family protein YdcY;protein_id=WP_000018633.1;transl_table=11
NZ_JJLS01000162.1	RefSeq	gene	1155	1604	.	-	.	ID=gene-AC56_RS14545;Name=ydcZ;gbkey=Gene;gene=ydcZ;gene_biotype=protein_coding;locus_tag=AC56_RS14545;old_locus_tag=AC56_1617
NZ_JJLS01000162.1	Protein Homology	CDS	1155	1604	.	-	0	ID=cds-WP_001076535.1;Parent=gene-AC56_RS14545;Dbxref=GenBank:WP_001076535.1;Name=WP_001076535.1;Ontology_term=GO:0055085,GO:0005215,GO:0016020;gbkey=CDS;gene=ydcZ;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415964.1;locus_tag=AC56_RS14545;product=DMT family transporter;protein_id=WP_001076535.1;transl_table=11
NZ_JJLS01000162.1	RefSeq	gene	1601	2119	.	-	.	ID=gene-AC56_RS14540;Name=mnaT;gbkey=Gene;gene=mnaT;gene_biotype=protein_coding;locus_tag=AC56_RS14540;old_locus_tag=AC56_1618
NZ_JJLS01000162.1	Protein Homology	CDS	1601	2119	.	-	0	ID=cds-WP_001296723.1;Parent=gene-AC56_RS14540;Dbxref=GenBank:WP_001296723.1;Name=WP_001296723.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;gene=mnaT;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310079.1;locus_tag=AC56_RS14540;product=GNAT family N-acetyltransferase;protein_id=WP_001296723.1;transl_table=11
NZ_JJLS01000162.1	RefSeq	gene	2300	3337	.	+	.	ID=gene-AC56_RS14535;Name=curA;gbkey=Gene;gene=curA;gene_biotype=protein_coding;locus_tag=AC56_RS14535;old_locus_tag=AC56_1619
NZ_JJLS01000162.1	Protein Homology	CDS	2300	3337	.	+	0	ID=cds-WP_032278259.1;Parent=gene-AC56_RS14535;Dbxref=GenBank:WP_032278259.1;Name=WP_032278259.1;gbkey=CDS;gene=curA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415966.6;locus_tag=AC56_RS14535;product=NADPH-dependent curcumin/dihydrocurcumin reductase;protein_id=WP_032278259.1;transl_table=11
NZ_JJLS01000162.1	RefSeq	pseudogene	3535	4201	.	+	.	ID=gene-AC56_RS0125860;Name=mcbR;gbkey=Gene;gene=mcbR;gene_biotype=pseudogene;locus_tag=AC56_RS0125860;old_locus_tag=AC56_1620;pseudo=true
NZ_JJLS01000162.1	Protein Homology	CDS	3535	4201	.	+	0	ID=cds-AC56_RS0125860;Parent=gene-AC56_RS0125860;Note=frameshifted;gbkey=CDS;gene=mcbR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415967.2;locus_tag=AC56_RS0125860;product=colanic acid/biofilm transcriptional regulator McbR;pseudo=true;transl_table=11
NZ_JJLS01000162.1	RefSeq	gene	4237	6339	.	-	.	ID=gene-AC56_RS14530;Name=pqqU;gbkey=Gene;gene=pqqU;gene_biotype=protein_coding;locus_tag=AC56_RS14530;old_locus_tag=AC56_1622
NZ_JJLS01000162.1	Protein Homology	CDS	4237	6339	.	-	0	ID=cds-WP_000689306.1;Parent=gene-AC56_RS14530;Dbxref=GenBank:WP_000689306.1;Name=WP_000689306.1;gbkey=CDS;gene=pqqU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310082.1;locus_tag=AC56_RS14530;product=TonB-dependent receptor PqqU;protein_id=WP_000689306.1;transl_table=11
NZ_JJLS01000162.1	RefSeq	gene	6581	7642	.	+	.	ID=gene-AC56_RS14525;Name=yncE;gbkey=Gene;gene=yncE;gene_biotype=protein_coding;locus_tag=AC56_RS14525;old_locus_tag=AC56_1624
NZ_JJLS01000162.1	Protein Homology	CDS	6581	7642	.	+	0	ID=cds-WP_000550675.1;Parent=gene-AC56_RS14525;Dbxref=GenBank:WP_000550675.1;Name=WP_000550675.1;gbkey=CDS;gene=yncE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310083.1;locus_tag=AC56_RS14525;product=YncE family protein;protein_id=WP_000550675.1;transl_table=11
NZ_JJLS01000162.1	RefSeq	gene	7757	9256	.	-	.	ID=gene-AC56_RS14520;Name=ansP;gbkey=Gene;gene=ansP;gene_biotype=protein_coding;locus_tag=AC56_RS14520;old_locus_tag=AC56_1625
NZ_JJLS01000162.1	Protein Homology	CDS	7757	9256	.	-	0	ID=cds-WP_032282662.1;Parent=gene-AC56_RS14520;Dbxref=GenBank:WP_032282662.1;Name=WP_032282662.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=ansP;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310084.2;locus_tag=AC56_RS14520;product=L-asparagine permease;protein_id=WP_032282662.1;transl_table=11
NZ_JJLS01000162.1	RefSeq	gene	9523	10140	.	+	.	ID=gene-AC56_RS14515;Name=yncG;gbkey=Gene;gene=yncG;gene_biotype=protein_coding;locus_tag=AC56_RS14515;old_locus_tag=AC56_1626
NZ_JJLS01000162.1	Protein Homology	CDS	9523	10140	.	+	0	ID=cds-WP_032278261.1;Parent=gene-AC56_RS14515;Dbxref=GenBank:WP_032278261.1;Name=WP_032278261.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yncG;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415971.1;locus_tag=AC56_RS14515;product=glutathione S-transferase family protein;protein_id=WP_032278261.1;transl_table=11
NZ_JJLS01000162.1	RefSeq	gene	10216	10428	.	+	.	ID=gene-AC56_RS14510;Name=yncH;gbkey=Gene;gene=yncH;gene_biotype=protein_coding;locus_tag=AC56_RS14510;old_locus_tag=AC56_1627
NZ_JJLS01000162.1	Protein Homology	CDS	10216	10428	.	+	0	ID=cds-WP_000226995.1;Parent=gene-AC56_RS14510;Dbxref=GenBank:WP_000226995.1;Name=WP_000226995.1;gbkey=CDS;gene=yncH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415972.1;locus_tag=AC56_RS14510;product=YncH family protein;protein_id=WP_000226995.1;transl_table=11
NZ_JJLS01000162.1	RefSeq	pseudogene	10778	11245	.	-	.	ID=gene-AC56_RS14505;Name=AC56_RS14505;end_range=11245,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS14505;old_locus_tag=AC56_1628;partial=true;pseudo=true
NZ_JJLS01000162.1	Protein Homology	CDS	10778	11245	.	-	1	ID=cds-AC56_RS14505;Parent=gene-AC56_RS14505;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0004803;end_range=11245,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS14505;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000163.1 1 367
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000163.1	RefSeq	region	1	367	.	+	.	ID=NZ_JJLS01000163.1:1..367;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000163.1	RefSeq	gene	1	367	.	+	.	ID=gene-AC56_RS14500;Name=AC56_RS14500;end_range=367,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS14500;old_locus_tag=AC56_1629;partial=true;start_range=.,1
NZ_JJLS01000163.1	Protein Homology	CDS	1	367	.	+	1	ID=cds-WP_032282665.1;Parent=gene-AC56_RS14500;Dbxref=GenBank:WP_032282665.1;Name=WP_032282665.1;Ontology_term=GO:0004803;end_range=367,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AC56_RS14500;partial=true;product=ISAs1 family transposase;protein_id=WP_032282665.1;start_range=.,1;transl_table=11
##sequence-region NZ_JJLS01000164.1 1 12284
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000164.1	RefSeq	region	1	12284	.	+	.	ID=NZ_JJLS01000164.1:1..12284;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000164.1	RefSeq	gene	1	439	.	+	.	ID=gene-AC56_RS14495;Name=AC56_RS14495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS14495;old_locus_tag=AC56_1630;partial=true;start_range=.,1
NZ_JJLS01000164.1	Protein Homology	CDS	1	439	.	+	1	ID=cds-WP_032282666.1;Parent=gene-AC56_RS14495;Dbxref=GenBank:WP_032282666.1;Name=WP_032282666.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AC56_RS14495;partial=true;product=ISAs1 family transposase;protein_id=WP_032282666.1;start_range=.,1;transl_table=11
NZ_JJLS01000164.1	RefSeq	gene	539	766	.	+	.	ID=gene-AC56_RS14490;Name=pptA;gbkey=Gene;gene=pptA;gene_biotype=protein_coding;locus_tag=AC56_RS14490;old_locus_tag=AC56_1631
NZ_JJLS01000164.1	Protein Homology	CDS	539	766	.	+	0	ID=cds-WP_001120145.1;Parent=gene-AC56_RS14490;Dbxref=GenBank:WP_001120145.1;Name=WP_001120145.1;gbkey=CDS;gene=pptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310091.1;locus_tag=AC56_RS14490;product=tautomerase PptA;protein_id=WP_001120145.1;transl_table=11
NZ_JJLS01000164.1	RefSeq	pseudogene	770	1339	.	-	.	ID=gene-AC56_RS0125865;Name=AC56_RS0125865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0125865;pseudo=true
NZ_JJLS01000164.1	Protein Homology	CDS	770	1339	.	-	0	ID=cds-AC56_RS0125865;Parent=gene-AC56_RS0125865;Note=internal stop;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415979.2;locus_tag=AC56_RS0125865;product=flavin reductase family protein;pseudo=true;transl_table=11
NZ_JJLS01000164.1	RefSeq	gene	1514	2359	.	+	.	ID=gene-AC56_RS14485;Name=nhoA;gbkey=Gene;gene=nhoA;gene_biotype=protein_coding;locus_tag=AC56_RS14485;old_locus_tag=AC56_1634
NZ_JJLS01000164.1	Protein Homology	CDS	1514	2359	.	+	0	ID=cds-WP_032278265.1;Parent=gene-AC56_RS14485;Dbxref=GenBank:WP_032278265.1;Name=WP_032278265.1;Ontology_term=GO:0016407;gbkey=CDS;gene=nhoA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415980.1;locus_tag=AC56_RS14485;product=N-hydroxyarylamine O-acetyltransferase;protein_id=WP_032278265.1;transl_table=11
NZ_JJLS01000164.1	RefSeq	gene	2455	3348	.	-	.	ID=gene-AC56_RS14480;Name=AC56_RS14480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS14480;old_locus_tag=AC56_1635
NZ_JJLS01000164.1	Protein Homology	CDS	2455	3348	.	-	0	ID=cds-WP_032278267.1;Parent=gene-AC56_RS14480;Dbxref=GenBank:WP_032278267.1;Name=WP_032278267.1;Ontology_term=GO:0009058,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310094.1;locus_tag=AC56_RS14480;product=PhzF family isomerase;protein_id=WP_032278267.1;transl_table=11
NZ_JJLS01000164.1	RefSeq	gene	3427	4107	.	-	.	ID=gene-AC56_RS14475;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=AC56_RS14475;old_locus_tag=AC56_1636
NZ_JJLS01000164.1	Protein Homology	CDS	3427	4107	.	-	0	ID=cds-WP_000617115.1;Parent=gene-AC56_RS14475;Dbxref=GenBank:WP_000617115.1;Name=WP_000617115.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310095.1;locus_tag=AC56_RS14475;product=respiratory nitrate reductase subunit gamma;protein_id=WP_000617115.1;transl_table=11
NZ_JJLS01000164.1	RefSeq	gene	4104	4799	.	-	.	ID=gene-AC56_RS14470;Name=narW;gbkey=Gene;gene=narW;gene_biotype=protein_coding;locus_tag=AC56_RS14470;old_locus_tag=AC56_1637
NZ_JJLS01000164.1	Protein Homology	CDS	4104	4799	.	-	0	ID=cds-WP_001166349.1;Parent=gene-AC56_RS14470;Dbxref=GenBank:WP_001166349.1;Name=WP_001166349.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narW;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415983.1;locus_tag=AC56_RS14470;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_001166349.1;transl_table=11
NZ_JJLS01000164.1	RefSeq	gene	4799	6343	.	-	.	ID=gene-AC56_RS14465;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=AC56_RS14465;old_locus_tag=AC56_1638
NZ_JJLS01000164.1	Protein Homology	CDS	4799	6343	.	-	0	ID=cds-WP_000702560.1;Parent=gene-AC56_RS14465;Dbxref=GenBank:WP_000702560.1;Name=WP_000702560.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310097.1;locus_tag=AC56_RS14465;product=nitrate reductase subunit beta;protein_id=WP_000702560.1;transl_table=11
NZ_JJLS01000164.1	RefSeq	gene	6340	10080	.	-	.	ID=gene-AC56_RS14460;Name=narZ;gbkey=Gene;gene=narZ;gene_biotype=protein_coding;locus_tag=AC56_RS14460;old_locus_tag=AC56_1639
NZ_JJLS01000164.1	Protein Homology	CDS	6340	10080	.	-	0	ID=cds-WP_032278268.1;Parent=gene-AC56_RS14460;Dbxref=GenBank:WP_032278268.1;Name=WP_032278268.1;gbkey=CDS;gene=narZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415985.1;locus_tag=AC56_RS14460;product=nitrate reductase Z subunit alpha;protein_id=WP_032278268.1;transl_table=11
NZ_JJLS01000164.1	RefSeq	gene	10162	11550	.	-	.	ID=gene-AC56_RS14455;Name=narU;gbkey=Gene;gene=narU;gene_biotype=protein_coding;locus_tag=AC56_RS14455;old_locus_tag=AC56_1640
NZ_JJLS01000164.1	Protein Homology	CDS	10162	11550	.	-	0	ID=cds-WP_001207905.1;Parent=gene-AC56_RS14455;Dbxref=GenBank:WP_001207905.1;Name=WP_001207905.1;gbkey=CDS;gene=narU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415986.1;locus_tag=AC56_RS14455;product=nitrate/nitrite transporter NarU;protein_id=WP_001207905.1;transl_table=11
NZ_JJLS01000164.1	RefSeq	gene	11821	12284	.	+	.	ID=gene-AC56_RS14450;Name=AC56_RS14450;end_range=12284,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS14450;old_locus_tag=AC56_1641;partial=true
NZ_JJLS01000164.1	Protein Homology	CDS	11821	12284	.	+	0	ID=cds-WP_032278299.1;Parent=gene-AC56_RS14450;Dbxref=GenBank:WP_032278299.1;Name=WP_032278299.1;Ontology_term=GO:0004803;end_range=12284,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS14450;partial=true;product=IS5 family transposase;protein_id=WP_032278299.1;transl_table=11
##sequence-region NZ_JJLS01000165.1 1 22237
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000165.1	RefSeq	region	1	22237	.	+	.	ID=NZ_JJLS01000165.1:1..22237;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000165.1	RefSeq	gene	1	362	.	+	.	ID=gene-AC56_RS14445;Name=AC56_RS14445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS14445;old_locus_tag=AC56_1642;partial=true;start_range=.,1
NZ_JJLS01000165.1	Protein Homology	CDS	1	362	.	+	2	ID=cds-WP_032282668.1;Parent=gene-AC56_RS14445;Dbxref=GenBank:WP_032282668.1;Name=WP_032282668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS14445;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032282668.1;start_range=.,1;transl_table=11
NZ_JJLS01000165.1	RefSeq	gene	685	1566	.	-	.	ID=gene-AC56_RS14440;Name=yddG;gbkey=Gene;gene=yddG;gene_biotype=protein_coding;locus_tag=AC56_RS14440;old_locus_tag=AC56_1643
NZ_JJLS01000165.1	Protein Homology	CDS	685	1566	.	-	0	ID=cds-WP_000198211.1;Parent=gene-AC56_RS14440;Dbxref=GenBank:WP_000198211.1;Name=WP_000198211.1;gbkey=CDS;gene=yddG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415990.5;locus_tag=AC56_RS14440;product=aromatic amino acid efflux DMT transporter YddG;protein_id=WP_000198211.1;transl_table=11
NZ_JJLS01000165.1	RefSeq	gene	1798	4845	.	+	.	ID=gene-AC56_RS14430;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=AC56_RS14430;old_locus_tag=AC56_1646
NZ_JJLS01000165.1	Protein Homology	CDS	1798	4845	.	+	0	ID=cds-WP_077903000.1;Parent=gene-AC56_RS14430;Dbxref=GenBank:WP_077903000.1;Name=WP_077903000.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310105.1;locus_tag=AC56_RS14430;product=formate dehydrogenase-N subunit alpha;protein_id=WP_077903000.1;transl_except=(pos:2383..2385%2Caa:Sec);transl_table=11
NZ_JJLS01000165.1	RefSeq	gene	4858	5742	.	+	.	ID=gene-AC56_RS14425;Name=fdnH;gbkey=Gene;gene=fdnH;gene_biotype=protein_coding;locus_tag=AC56_RS14425;old_locus_tag=AC56_1647
NZ_JJLS01000165.1	Protein Homology	CDS	4858	5742	.	+	0	ID=cds-WP_001391970.1;Parent=gene-AC56_RS14425;Dbxref=GenBank:WP_001391970.1;Name=WP_001391970.1;gbkey=CDS;gene=fdnH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415992.1;locus_tag=AC56_RS14425;product=formate dehydrogenase N subunit beta;protein_id=WP_001391970.1;transl_table=11
NZ_JJLS01000165.1	RefSeq	gene	5735	6388	.	+	.	ID=gene-AC56_RS14420;Name=fdnI;gbkey=Gene;gene=fdnI;gene_biotype=protein_coding;locus_tag=AC56_RS14420;old_locus_tag=AC56_1648
NZ_JJLS01000165.1	Protein Homology	CDS	5735	6388	.	+	0	ID=cds-WP_000045648.1;Parent=gene-AC56_RS14420;Dbxref=GenBank:WP_000045648.1;Name=WP_000045648.1;gbkey=CDS;gene=fdnI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310107.1;locus_tag=AC56_RS14420;product=formate dehydrogenase-N subunit gamma;protein_id=WP_000045648.1;transl_table=11
NZ_JJLS01000165.1	RefSeq	gene	6617	6901	.	-	.	ID=gene-AC56_RS14415;Name=AC56_RS14415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS14415;old_locus_tag=AC56_1649
NZ_JJLS01000165.1	Protein Homology	CDS	6617	6901	.	-	0	ID=cds-WP_000781370.1;Parent=gene-AC56_RS14415;Dbxref=GenBank:WP_000781370.1;Name=WP_000781370.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415994.4;locus_tag=AC56_RS14415;product=HigA family addiction module antitoxin;protein_id=WP_000781370.1;transl_table=11
NZ_JJLS01000165.1	RefSeq	pseudogene	7047	8065	.	-	.	ID=gene-AC56_RS0125870;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=pseudogene;locus_tag=AC56_RS0125870;pseudo=true
NZ_JJLS01000165.1	Protein Homology	CDS	7047	8065	.	-	0	ID=cds-AC56_RS0125870;Parent=gene-AC56_RS0125870;Note=frameshifted;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415995.4;locus_tag=AC56_RS0125870;product=alcohol dehydrogenase AdhP;pseudo=true;transl_table=11
NZ_JJLS01000165.1	RefSeq	gene	8199	9896	.	-	.	ID=gene-AC56_RS14410;Name=maeA;gbkey=Gene;gene=maeA;gene_biotype=protein_coding;locus_tag=AC56_RS14410;old_locus_tag=AC56_1653
NZ_JJLS01000165.1	Protein Homology	CDS	8199	9896	.	-	0	ID=cds-WP_032278273.1;Parent=gene-AC56_RS14410;Dbxref=GenBank:WP_032278273.1;Name=WP_032278273.1;gbkey=CDS;gene=maeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415996.2;locus_tag=AC56_RS14410;product=malate dehydrogenase;protein_id=WP_032278273.1;transl_table=11
NZ_JJLS01000165.1	RefSeq	gene	10053	10190	.	-	.	ID=gene-AC56_RS14405;Name=sra;gbkey=Gene;gene=sra;gene_biotype=protein_coding;locus_tag=AC56_RS14405;old_locus_tag=AC56_1654
NZ_JJLS01000165.1	Protein Homology	CDS	10053	10190	.	-	0	ID=cds-WP_000841554.1;Parent=gene-AC56_RS14405;Dbxref=GenBank:WP_000841554.1;Name=WP_000841554.1;gbkey=CDS;gene=sra;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310111.1;locus_tag=AC56_RS14405;product=stationary-phase-induced ribosome-associated protein;protein_id=WP_000841554.1;transl_table=11
NZ_JJLS01000165.1	RefSeq	gene	10292	10507	.	-	.	ID=gene-AC56_RS14400;Name=bdm;gbkey=Gene;gene=bdm;gene_biotype=protein_coding;locus_tag=AC56_RS14400;old_locus_tag=AC56_1655
NZ_JJLS01000165.1	Protein Homology	CDS	10292	10507	.	-	0	ID=cds-WP_000495771.1;Parent=gene-AC56_RS14400;Dbxref=GenBank:WP_000495771.1;Name=WP_000495771.1;gbkey=CDS;gene=bdm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415998.4;locus_tag=AC56_RS14400;product=biofilm-dependent modulation protein;protein_id=WP_000495771.1;transl_table=11
NZ_JJLS01000165.1	RefSeq	gene	10852	11283	.	+	.	ID=gene-AC56_RS14395;Name=osmC;gbkey=Gene;gene=osmC;gene_biotype=protein_coding;locus_tag=AC56_RS14395;old_locus_tag=AC56_1656
NZ_JJLS01000165.1	Protein Homology	CDS	10852	11283	.	+	0	ID=cds-WP_000152305.1;Parent=gene-AC56_RS14395;Dbxref=GenBank:WP_000152305.1;Name=WP_000152305.1;gbkey=CDS;gene=osmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415999.1;locus_tag=AC56_RS14395;product=peroxiredoxin OsmC;protein_id=WP_000152305.1;transl_table=11
NZ_JJLS01000165.1	RefSeq	gene	11339	12265	.	-	.	ID=gene-AC56_RS14390;Name=AC56_RS14390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS14390;old_locus_tag=AC56_1657
NZ_JJLS01000165.1	Protein Homology	CDS	11339	12265	.	-	0	ID=cds-WP_001285555.1;Parent=gene-AC56_RS14390;Dbxref=GenBank:WP_001285555.1;Name=WP_001285555.1;Ontology_term=GO:0015833,GO:0005524,GO:0015440,GO:0009898,GO:0043190;gbkey=CDS;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type peptide transporter activity|0015440||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416000.1;locus_tag=AC56_RS14390;product=oligopeptide/dipeptide ABC transporter ATP-binding protein;protein_id=WP_001285555.1;transl_table=11
NZ_JJLS01000165.1	RefSeq	gene	12258	13244	.	-	.	ID=gene-AC56_RS14385;Name=AC56_RS14385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS14385;old_locus_tag=AC56_1658
NZ_JJLS01000165.1	Protein Homology	CDS	12258	13244	.	-	0	ID=cds-WP_000193546.1;Parent=gene-AC56_RS14385;Dbxref=GenBank:WP_000193546.1;Name=WP_000193546.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416001.1;locus_tag=AC56_RS14385;product=ABC transporter ATP-binding protein;protein_id=WP_000193546.1;transl_table=11
NZ_JJLS01000165.1	RefSeq	gene	13241	14137	.	-	.	ID=gene-AC56_RS14380;Name=ddpC;gbkey=Gene;gene=ddpC;gene_biotype=protein_coding;locus_tag=AC56_RS14380;old_locus_tag=AC56_1659
NZ_JJLS01000165.1	Protein Homology	CDS	13241	14137	.	-	0	ID=cds-WP_000979623.1;Parent=gene-AC56_RS14380;Dbxref=GenBank:WP_000979623.1;Name=WP_000979623.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=ddpC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310116.1;locus_tag=AC56_RS14380;product=D%2CD-dipeptide ABC transporter permease;protein_id=WP_000979623.1;transl_table=11
NZ_JJLS01000165.1	RefSeq	pseudogene	14134	15155	.	-	.	ID=gene-AC56_RS14375;Name=AC56_RS14375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS14375;old_locus_tag=AC56_1661;pseudo=true
NZ_JJLS01000165.1	Protein Homology	CDS	14134	15155	.	-	0	ID=cds-AC56_RS14375;Parent=gene-AC56_RS14375;Note=frameshifted;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416003.1;locus_tag=AC56_RS14375;product=ABC transporter permease;pseudo=true;transl_table=11
NZ_JJLS01000165.1	RefSeq	gene	15157	16707	.	-	.	ID=gene-AC56_RS14370;Name=AC56_RS14370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS14370;old_locus_tag=AC56_1662
NZ_JJLS01000165.1	Protein Homology	CDS	15157	16707	.	-	0	ID=cds-WP_032278274.1;Parent=gene-AC56_RS14370;Dbxref=GenBank:WP_032278274.1;Name=WP_032278274.1;Ontology_term=GO:0005524,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310118.1;locus_tag=AC56_RS14370;product=ABC transporter substrate-binding protein;protein_id=WP_032278274.1;transl_table=11
NZ_JJLS01000165.1	RefSeq	gene	16721	17302	.	-	.	ID=gene-AC56_RS14365;Name=ddpX;gbkey=Gene;gene=ddpX;gene_biotype=protein_coding;locus_tag=AC56_RS14365;old_locus_tag=AC56_1663
NZ_JJLS01000165.1	Protein Homology	CDS	16721	17302	.	-	0	ID=cds-WP_032282669.1;Parent=gene-AC56_RS14365;Dbxref=GenBank:WP_032282669.1;Name=WP_032282669.1;Ontology_term=GO:0006508,GO:0016805;gbkey=CDS;gene=ddpX;go_function=dipeptidase activity|0016805||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310119.1;locus_tag=AC56_RS14365;product=D-alanyl-D-alanine dipeptidase;protein_id=WP_032282669.1;transl_table=11
NZ_JJLS01000165.1	RefSeq	gene	17560	19959	.	-	.	ID=gene-AC56_RS14360;Name=dosP;gbkey=Gene;gene=dosP;gene_biotype=protein_coding;gene_synonym=pdeO;locus_tag=AC56_RS14360;old_locus_tag=AC56_1665
NZ_JJLS01000165.1	Protein Homology	CDS	17560	19959	.	-	0	ID=cds-WP_072318597.1;Parent=gene-AC56_RS14360;Dbxref=GenBank:WP_072318597.1;Name=WP_072318597.1;gbkey=CDS;gene=dosP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416006.4;locus_tag=AC56_RS14360;product=oxygen-sensing cyclic-di-GMP phosphodiesterase DosP;protein_id=WP_072318597.1;transl_table=11
NZ_JJLS01000165.1	RefSeq	gene	19984	21366	.	-	.	ID=gene-AC56_RS14355;Name=dosC;gbkey=Gene;gene=dosC;gene_biotype=protein_coding;locus_tag=AC56_RS14355;old_locus_tag=AC56_1666
NZ_JJLS01000165.1	Protein Homology	CDS	19984	21366	.	-	0	ID=cds-WP_000426292.1;Parent=gene-AC56_RS14355;Dbxref=GenBank:WP_000426292.1;Name=WP_000426292.1;gbkey=CDS;gene=dosC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310122.1;locus_tag=AC56_RS14355;product=diguanylate cyclase DosC;protein_id=WP_000426292.1;transl_table=11
NZ_JJLS01000165.1	RefSeq	pseudogene	21772	22237	.	-	.	ID=gene-AC56_RS0125875;Name=AC56_RS0125875;end_range=22237,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0125875;partial=true;pseudo=true
NZ_JJLS01000165.1	Protein Homology	CDS	21772	22237	.	-	1	ID=cds-AC56_RS0125875;Parent=gene-AC56_RS0125875;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=22237,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS0125875;partial=true;product=IS5-like element ISKpn26 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000166.1 1 21733
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000166.1	RefSeq	region	1	21733	.	+	.	ID=NZ_JJLS01000166.1:1..21733;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000166.1	RefSeq	gene	1	625	.	-	.	ID=gene-AC56_RS14350;Name=AC56_RS14350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS14350;old_locus_tag=AC56_1668;partial=true;start_range=.,1
NZ_JJLS01000166.1	Protein Homology	CDS	1	625	.	-	0	ID=cds-WP_032282676.1;Parent=gene-AC56_RS14350;Dbxref=GenBank:WP_032282676.1;Name=WP_032282676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417965.1;locus_tag=AC56_RS14350;partial=true;product=MgtC/SapB family protein;protein_id=WP_032282676.1;start_range=.,1;transl_table=11
NZ_JJLS01000166.1	RefSeq	gene	689	1015	.	-	.	ID=gene-AC56_RS14345;Name=hdeB;gbkey=Gene;gene=hdeB;gene_biotype=protein_coding;locus_tag=AC56_RS14345;old_locus_tag=AC56_1669
NZ_JJLS01000166.1	Protein Homology	CDS	689	1015	.	-	0	ID=cds-WP_001298717.1-3;Parent=gene-AC56_RS14345;Dbxref=GenBank:WP_001298717.1;Name=WP_001298717.1;gbkey=CDS;gene=hdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417966.4;locus_tag=AC56_RS14345;product=acid-activated periplasmic chaperone HdeB;protein_id=WP_001298717.1;transl_table=11
NZ_JJLS01000166.1	RefSeq	gene	1131	1463	.	-	.	ID=gene-AC56_RS14340;Name=hdeA;gbkey=Gene;gene=hdeA;gene_biotype=protein_coding;locus_tag=AC56_RS14340;old_locus_tag=AC56_1670
NZ_JJLS01000166.1	Protein Homology	CDS	1131	1463	.	-	0	ID=cds-WP_000756550.1-3;Parent=gene-AC56_RS14340;Dbxref=GenBank:WP_000756550.1;Name=WP_000756550.1;gbkey=CDS;gene=hdeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312417.1;locus_tag=AC56_RS14340;product=acid-activated periplasmic chaperone HdeA;protein_id=WP_000756550.1;transl_table=11
NZ_JJLS01000166.1	RefSeq	gene	1718	2290	.	+	.	ID=gene-AC56_RS14335;Name=hdeD;gbkey=Gene;gene=hdeD;gene_biotype=protein_coding;locus_tag=AC56_RS14335;old_locus_tag=AC56_1671
NZ_JJLS01000166.1	Protein Homology	CDS	1718	2290	.	+	0	ID=cds-WP_000965672.1-3;Parent=gene-AC56_RS14335;Dbxref=GenBank:WP_000965672.1;Name=WP_000965672.1;gbkey=CDS;gene=hdeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312418.1;locus_tag=AC56_RS14335;product=acid-resistance protein HdeD;protein_id=WP_000965672.1;transl_table=11
NZ_JJLS01000166.1	RefSeq	gene	3089	3616	.	+	.	ID=gene-AC56_RS14330;Name=gadE;gbkey=Gene;gene=gadE;gene_biotype=protein_coding;locus_tag=AC56_RS14330;old_locus_tag=AC56_1672
NZ_JJLS01000166.1	Protein Homology	CDS	3089	3616	.	+	0	ID=cds-WP_000576690.1-3;Parent=gene-AC56_RS14330;Dbxref=GenBank:WP_000576690.1;Name=WP_000576690.1;gbkey=CDS;gene=gadE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312419.1;locus_tag=AC56_RS14330;product=acid resistance transcriptional activator GadE;protein_id=WP_000576690.1;transl_table=11
NZ_JJLS01000166.1	RefSeq	gene	3617	3895	.	-	.	ID=gene-AC56_RS0125880;Name=AC56_RS0125880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0125880
NZ_JJLS01000166.1	Protein Homology	CDS	3617	3895	.	-	0	ID=cds-WP_001205329.1-3;Parent=gene-AC56_RS0125880;Dbxref=GenBank:WP_001205329.1;Name=WP_001205329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439288.1;locus_tag=AC56_RS0125880;product=hypothetical protein;protein_id=WP_001205329.1;transl_table=11
NZ_JJLS01000166.1	RefSeq	gene	4003	5112	.	+	.	ID=gene-AC56_RS14325;Name=mdtE;gbkey=Gene;gene=mdtE;gene_biotype=protein_coding;locus_tag=AC56_RS14325;old_locus_tag=AC56_1673
NZ_JJLS01000166.1	Protein Homology	CDS	4003	5112	.	+	0	ID=cds-WP_001340474.1-3;Parent=gene-AC56_RS14325;Dbxref=GenBank:WP_001340474.1;Name=WP_001340474.1;gbkey=CDS;gene=mdtE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001081792.1;locus_tag=AC56_RS14325;product=multidrug transporter subunit MdtE;protein_id=WP_001340474.1;transl_table=11
NZ_JJLS01000166.1	RefSeq	gene	5137	8250	.	+	.	ID=gene-AC56_RS14320;Name=mdtF;gbkey=Gene;gene=mdtF;gene_biotype=protein_coding;locus_tag=AC56_RS14320;old_locus_tag=AC56_1674
NZ_JJLS01000166.1	Protein Homology	CDS	5137	8250	.	+	0	ID=cds-WP_001506351.1-3;Parent=gene-AC56_RS14320;Dbxref=GenBank:WP_001506351.1;Name=WP_001506351.1;gbkey=CDS;gene=mdtF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417971.1;locus_tag=AC56_RS14320;product=multidrug efflux pump RND permease MdtF;protein_id=WP_001506351.1;transl_table=11
NZ_JJLS01000166.1	RefSeq	gene	8613	9341	.	-	.	ID=gene-AC56_RS14315;Name=gadW;gbkey=Gene;gene=gadW;gene_biotype=protein_coding;locus_tag=AC56_RS14315;old_locus_tag=AC56_1675
NZ_JJLS01000166.1	Protein Homology	CDS	8613	9341	.	-	0	ID=cds-WP_000149999.1-3;Parent=gene-AC56_RS14315;Dbxref=GenBank:WP_000149999.1;Name=WP_000149999.1;gbkey=CDS;gene=gadW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312422.1;locus_tag=AC56_RS14315;product=acid resistance transcriptional activator GadW;protein_id=WP_000149999.1;transl_table=11
NZ_JJLS01000166.1	RefSeq	gene	9709	10533	.	-	.	ID=gene-AC56_RS14310;Name=gadX;gbkey=Gene;gene=gadX;gene_biotype=protein_coding;locus_tag=AC56_RS14310;old_locus_tag=AC56_1676
NZ_JJLS01000166.1	Protein Homology	CDS	9709	10533	.	-	0	ID=cds-WP_001191059.1-3;Parent=gene-AC56_RS14310;Dbxref=GenBank:WP_001191059.1;Name=WP_001191059.1;gbkey=CDS;gene=gadX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417973.1;locus_tag=AC56_RS14310;product=acid resistance transcriptional activator GadX;protein_id=WP_001191059.1;transl_table=11
NZ_JJLS01000166.1	RefSeq	gene	10903	12303	.	-	.	ID=gene-AC56_RS14305;Name=gadB;gbkey=Gene;gene=gadB;gene_biotype=protein_coding;locus_tag=AC56_RS14305;old_locus_tag=AC56_1677
NZ_JJLS01000166.1	Protein Homology	CDS	10903	12303	.	-	0	ID=cds-WP_000358930.1;Parent=gene-AC56_RS14305;Dbxref=GenBank:WP_000358930.1;Name=WP_000358930.1;Ontology_term=GO:0006540,GO:0004351,GO:0030170;gbkey=CDS;gene=gadB;go_function=glutamate decarboxylase activity|0004351||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyrate shunt|0006540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310125.1;locus_tag=AC56_RS14305;product=glutamate decarboxylase;protein_id=WP_000358930.1;transl_table=11
NZ_JJLS01000166.1	RefSeq	gene	12665	15448	.	-	.	ID=gene-AC56_RS14300;Name=pqqL;gbkey=Gene;gene=pqqL;gene_biotype=protein_coding;locus_tag=AC56_RS14300;old_locus_tag=AC56_1678
NZ_JJLS01000166.1	Protein Homology	CDS	12665	15448	.	-	0	ID=cds-WP_032278279.1;Parent=gene-AC56_RS14300;Dbxref=GenBank:WP_032278279.1;Name=WP_032278279.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;gene=pqqL;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310126.2;locus_tag=AC56_RS14300;product=M16 family metallopeptidase;protein_id=WP_032278279.1;transl_table=11
NZ_JJLS01000166.1	RefSeq	gene	15505	17877	.	-	.	ID=gene-AC56_RS14295;Name=yddB;gbkey=Gene;gene=yddB;gene_biotype=protein_coding;locus_tag=AC56_RS14295;old_locus_tag=AC56_1679
NZ_JJLS01000166.1	Protein Homology	CDS	15505	17877	.	-	0	ID=cds-WP_032282673.1;Parent=gene-AC56_RS14295;Dbxref=GenBank:WP_032282673.1;Name=WP_032282673.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267,GO:0009279,GO:0016020;gbkey=CDS;gene=yddB;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=channel activity|0015267||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416012.1;locus_tag=AC56_RS14295;product=TonB-dependent receptor plug domain-containing protein;protein_id=WP_032282673.1;transl_table=11
NZ_JJLS01000166.1	RefSeq	gene	17915	19600	.	-	.	ID=gene-AC56_RS14290;Name=yddA;gbkey=Gene;gene=yddA;gene_biotype=protein_coding;locus_tag=AC56_RS14290;old_locus_tag=AC56_1680
NZ_JJLS01000166.1	Protein Homology	CDS	17915	19600	.	-	0	ID=cds-WP_004015950.1;Parent=gene-AC56_RS14290;Dbxref=GenBank:WP_004015950.1;Name=WP_004015950.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=yddA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416013.1;locus_tag=AC56_RS14290;product=ABC transporter ATP-binding protein/permease;protein_id=WP_004015950.1;transl_table=11
NZ_JJLS01000166.1	RefSeq	gene	19803	19925	.	+	.	ID=gene-AC56_RS32735;Name=AC56_RS32735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS32735
NZ_JJLS01000166.1	Protein Homology	CDS	19803	19925	.	+	0	ID=cds-WP_122985823.1;Parent=gene-AC56_RS32735;Dbxref=GenBank:WP_122985823.1;Name=WP_122985823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518784.1;locus_tag=AC56_RS32735;product=hypothetical protein;protein_id=WP_122985823.1;transl_table=11
NZ_JJLS01000166.1	RefSeq	gene	19891	21048	.	-	.	ID=gene-AC56_RS14285;Name=ydeM;gbkey=Gene;gene=ydeM;gene_biotype=protein_coding;locus_tag=AC56_RS14285;old_locus_tag=AC56_1681
NZ_JJLS01000166.1	Protein Homology	CDS	19891	21048	.	-	0	ID=cds-WP_032282674.1;Parent=gene-AC56_RS14285;Dbxref=GenBank:WP_032282674.1;Name=WP_032282674.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;gene=ydeM;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416014.4;locus_tag=AC56_RS14285;product=anaerobic sulfatase maturase;protein_id=WP_032282674.1;transl_table=11
NZ_JJLS01000166.1	RefSeq	pseudogene	21100	21282	.	-	.	ID=gene-AC56_RS14280;Name=AC56_RS14280;end_range=21282,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS14280;old_locus_tag=AC56_1682;partial=true;pseudo=true
NZ_JJLS01000166.1	Protein Homology	CDS	21100	21282	.	-	0	ID=cds-AC56_RS14280;Parent=gene-AC56_RS14280;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=21282,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707595.1;locus_tag=AC56_RS14280;partial=true;product=sulfatase;pseudo=true;transl_table=11
NZ_JJLS01000166.1	RefSeq	gene	21351	21733	.	+	.	ID=gene-AC56_RS14275;Name=AC56_RS14275;end_range=21733,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS14275;old_locus_tag=AC56_1683;partial=true
NZ_JJLS01000166.1	Protein Homology	CDS	21351	21733	.	+	0	ID=cds-WP_009308923.1;Parent=gene-AC56_RS14275;Dbxref=GenBank:WP_009308923.1;Name=WP_009308923.1;end_range=21733,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS14275;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_009308923.1;transl_table=11
##sequence-region NZ_JJLS01000167.1 1 38913
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000167.1	RefSeq	region	1	38913	.	+	.	ID=NZ_JJLS01000167.1:1..38913;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000167.1	RefSeq	gene	1	299	.	+	.	ID=gene-AC56_RS14270;Name=AC56_RS14270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS14270;old_locus_tag=AC56_1684;partial=true;start_range=.,1
NZ_JJLS01000167.1	Protein Homology	CDS	1	299	.	+	2	ID=cds-WP_032282679.1;Parent=gene-AC56_RS14270;Dbxref=GenBank:WP_032282679.1;Name=WP_032282679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS14270;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032282679.1;start_range=.,1;transl_table=11
NZ_JJLS01000167.1	RefSeq	pseudogene	430	1950	.	-	.	ID=gene-AC56_RS14265;Name=ydeN;gbkey=Gene;gene=ydeN;gene_biotype=pseudogene;locus_tag=AC56_RS14265;old_locus_tag=AC56_1685;partial=true;pseudo=true;start_range=.,430
NZ_JJLS01000167.1	Protein Homology	CDS	430	1950	.	-	0	ID=cds-AC56_RS14265;Parent=gene-AC56_RS14265;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0008484;gbkey=CDS;gene=ydeN;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416015.2;locus_tag=AC56_RS14265;partial=true;product=sulfatase-like hydrolase/transferase;pseudo=true;start_range=.,430;transl_table=11
NZ_JJLS01000167.1	RefSeq	gene	2352	3113	.	-	.	ID=gene-AC56_RS14260;Name=ydeO;gbkey=Gene;gene=ydeO;gene_biotype=protein_coding;locus_tag=AC56_RS14260;old_locus_tag=AC56_1686
NZ_JJLS01000167.1	Protein Homology	CDS	2352	3113	.	-	0	ID=cds-WP_032278284.1;Parent=gene-AC56_RS14260;Dbxref=GenBank:WP_032278284.1;Name=WP_032278284.1;gbkey=CDS;gene=ydeO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416016.1;locus_tag=AC56_RS14260;product=acid stress response transcriptional regulator YdeO;protein_id=WP_032278284.1;transl_table=11
NZ_JJLS01000167.1	RefSeq	gene	3187	3384	.	-	.	ID=gene-AC56_RS14255;Name=safA;gbkey=Gene;gene=safA;gene_biotype=protein_coding;locus_tag=AC56_RS14255;old_locus_tag=AC56_1687
NZ_JJLS01000167.1	Protein Homology	CDS	3187	3384	.	-	0	ID=cds-WP_000543394.1;Parent=gene-AC56_RS14255;Dbxref=GenBank:WP_000543394.1;Name=WP_000543394.1;gbkey=CDS;gene=safA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310132.1;locus_tag=AC56_RS14255;product=two-component system connector SafA;protein_id=WP_000543394.1;transl_table=11
NZ_JJLS01000167.1	RefSeq	gene	3632	5911	.	-	.	ID=gene-AC56_RS14250;Name=ydeP;gbkey=Gene;gene=ydeP;gene_biotype=protein_coding;locus_tag=AC56_RS14250;old_locus_tag=AC56_1688
NZ_JJLS01000167.1	Protein Homology	CDS	3632	5911	.	-	0	ID=cds-WP_000726695.1;Parent=gene-AC56_RS14250;Dbxref=GenBank:WP_000726695.1;Name=WP_000726695.1;gbkey=CDS;gene=ydeP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416018.1;locus_tag=AC56_RS14250;product=acid resistance putative oxidoreductase YdeP;protein_id=WP_000726695.1;transl_table=11
NZ_JJLS01000167.1	RefSeq	pseudogene	6245	6742	.	-	.	ID=gene-AC56_RS0125890;Name=AC56_RS0125890;end_range=6742,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0125890;partial=true;pseudo=true
NZ_JJLS01000167.1	Protein Homology	CDS	6245	6742	.	-	0	ID=cds-AC56_RS0125890;Parent=gene-AC56_RS0125890;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=6742,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416019.1;locus_tag=AC56_RS0125890;partial=true;product=fimbrial protein;pseudo=true;transl_table=11
NZ_JJLS01000167.1	RefSeq	gene	7111	8433	.	-	.	ID=gene-AC56_RS14245;Name=hipA;gbkey=Gene;gene=hipA;gene_biotype=protein_coding;locus_tag=AC56_RS14245;old_locus_tag=AC56_1690
NZ_JJLS01000167.1	Protein Homology	CDS	7111	8433	.	-	0	ID=cds-WP_001125439.1;Parent=gene-AC56_RS14245;Dbxref=GenBank:WP_001125439.1;Name=WP_001125439.1;gbkey=CDS;gene=hipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416024.1;locus_tag=AC56_RS14245;product=type II toxin-antitoxin system serine/threonine protein kinase toxin HipA;protein_id=WP_001125439.1;transl_table=11
NZ_JJLS01000167.1	RefSeq	gene	8433	8699	.	-	.	ID=gene-AC56_RS14240;Name=hipB;gbkey=Gene;gene=hipB;gene_biotype=protein_coding;locus_tag=AC56_RS14240;old_locus_tag=AC56_1691
NZ_JJLS01000167.1	Protein Homology	CDS	8433	8699	.	-	0	ID=cds-WP_001301023.1;Parent=gene-AC56_RS14240;Dbxref=GenBank:WP_001301023.1;Name=WP_001301023.1;gbkey=CDS;gene=hipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416025.1;locus_tag=AC56_RS14240;product=type II toxin-antitoxin system antitoxin HipB;protein_id=WP_001301023.1;transl_table=11
NZ_JJLS01000167.1	RefSeq	gene	8922	14342	.	-	.	ID=gene-AC56_RS14235;Name=AC56_RS14235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS14235;old_locus_tag=AC56_1692
NZ_JJLS01000167.1	Protein Homology	CDS	8922	14342	.	-	0	ID=cds-WP_032278285.1;Parent=gene-AC56_RS14235;Dbxref=GenBank:WP_032278285.1;Name=WP_032278285.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016244610.1;locus_tag=AC56_RS14235;product=ECSE_1600 family autotransporter;protein_id=WP_032278285.1;transl_table=11
NZ_JJLS01000167.1	RefSeq	gene	14873	16465	.	-	.	ID=gene-AC56_RS14230;Name=lsrK;gbkey=Gene;gene=lsrK;gene_biotype=protein_coding;locus_tag=AC56_RS14230;old_locus_tag=AC56_1693
NZ_JJLS01000167.1	Protein Homology	CDS	14873	16465	.	-	0	ID=cds-WP_000113144.1;Parent=gene-AC56_RS14230;Dbxref=GenBank:WP_000113144.1;Name=WP_000113144.1;Ontology_term=GO:0005975,GO:0009372,GO:0071518;gbkey=CDS;gene=lsrK;go_function=autoinducer-2 kinase activity|0071518||IEA;go_process=carbohydrate metabolic process|0005975||IEA,quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416028.3;locus_tag=AC56_RS14230;product=autoinducer-2 kinase;protein_id=WP_000113144.1;transl_table=11
NZ_JJLS01000167.1	RefSeq	gene	16544	17497	.	-	.	ID=gene-AC56_RS14225;Name=lsrR;gbkey=Gene;gene=lsrR;gene_biotype=protein_coding;locus_tag=AC56_RS14225;old_locus_tag=AC56_1694
NZ_JJLS01000167.1	Protein Homology	CDS	16544	17497	.	-	0	ID=cds-WP_032278286.1;Parent=gene-AC56_RS14225;Dbxref=GenBank:WP_032278286.1;Name=WP_032278286.1;gbkey=CDS;gene=lsrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310146.1;locus_tag=AC56_RS14225;product=transcriptional regulator LsrR;protein_id=WP_032278286.1;transl_table=11
NZ_JJLS01000167.1	RefSeq	gene	17746	19281	.	+	.	ID=gene-AC56_RS14220;Name=lsrA;gbkey=Gene;gene=lsrA;gene_biotype=protein_coding;locus_tag=AC56_RS14220;old_locus_tag=AC56_1695
NZ_JJLS01000167.1	Protein Homology	CDS	17746	19281	.	+	0	ID=cds-WP_001194875.1;Parent=gene-AC56_RS14220;Dbxref=GenBank:WP_001194875.1;Name=WP_001194875.1;Ontology_term=GO:1905887,GO:0005524,GO:0042626,GO:0016020;gbkey=CDS;gene=lsrA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416030.1;locus_tag=AC56_RS14220;product=autoinducer 2 ABC transporter ATP-binding protein LsrA;protein_id=WP_001194875.1;transl_table=11
NZ_JJLS01000167.1	RefSeq	gene	19275	20303	.	+	.	ID=gene-AC56_RS14215;Name=lsrC;gbkey=Gene;gene=lsrC;gene_biotype=protein_coding;locus_tag=AC56_RS14215;old_locus_tag=AC56_1696
NZ_JJLS01000167.1	Protein Homology	CDS	19275	20303	.	+	0	ID=cds-WP_032278287.1;Parent=gene-AC56_RS14215;Dbxref=GenBank:WP_032278287.1;Name=WP_032278287.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lsrC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416031.1;locus_tag=AC56_RS14215;product=autoinducer 2 ABC transporter permease LsrC;protein_id=WP_032278287.1;transl_table=11
NZ_JJLS01000167.1	RefSeq	gene	20303	21295	.	+	.	ID=gene-AC56_RS14210;Name=lsrD;gbkey=Gene;gene=lsrD;gene_biotype=protein_coding;locus_tag=AC56_RS14210;old_locus_tag=AC56_1697
NZ_JJLS01000167.1	Protein Homology	CDS	20303	21295	.	+	0	ID=cds-WP_001222721.1;Parent=gene-AC56_RS14210;Dbxref=GenBank:WP_001222721.1;Name=WP_001222721.1;gbkey=CDS;gene=lsrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416032.1;locus_tag=AC56_RS14210;product=autoinducer 2 ABC transporter permease LsrD;protein_id=WP_001222721.1;transl_table=11
NZ_JJLS01000167.1	RefSeq	gene	21307	22329	.	+	.	ID=gene-AC56_RS14205;Name=lsrB;gbkey=Gene;gene=lsrB;gene_biotype=protein_coding;locus_tag=AC56_RS14205;old_locus_tag=AC56_1698
NZ_JJLS01000167.1	Protein Homology	CDS	21307	22329	.	+	0	ID=cds-WP_000172488.1;Parent=gene-AC56_RS14205;Dbxref=GenBank:WP_000172488.1;Name=WP_000172488.1;gbkey=CDS;gene=lsrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310150.1;locus_tag=AC56_RS14205;product=autoinducer 2 ABC transporter substrate-binding protein LsrB;protein_id=WP_000172488.1;transl_table=11
NZ_JJLS01000167.1	RefSeq	gene	22356	23231	.	+	.	ID=gene-AC56_RS14200;Name=lsrF;gbkey=Gene;gene=lsrF;gene_biotype=protein_coding;locus_tag=AC56_RS14200;old_locus_tag=AC56_1699
NZ_JJLS01000167.1	Protein Homology	CDS	22356	23231	.	+	0	ID=cds-WP_000774189.1;Parent=gene-AC56_RS14200;Dbxref=GenBank:WP_000774189.1;Name=WP_000774189.1;Ontology_term=GO:0016829;gbkey=CDS;gene=lsrF;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310151.1;locus_tag=AC56_RS14200;product=3-hydroxy-5-phosphonooxypentane-2%2C4-dione thiolase;protein_id=WP_000774189.1;transl_table=11
NZ_JJLS01000167.1	RefSeq	gene	23255	23545	.	+	.	ID=gene-AC56_RS14195;Name=lsrG;gbkey=Gene;gene=lsrG;gene_biotype=protein_coding;locus_tag=AC56_RS14195;old_locus_tag=AC56_1700
NZ_JJLS01000167.1	Protein Homology	CDS	23255	23545	.	+	0	ID=cds-WP_000558527.1;Parent=gene-AC56_RS14195;Dbxref=GenBank:WP_000558527.1;Name=WP_000558527.1;gbkey=CDS;gene=lsrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310152.1;locus_tag=AC56_RS14195;product=(4S)-4-hydroxy-5-phosphonooxypentane-2%2C3-dione isomerase;protein_id=WP_000558527.1;transl_table=11
NZ_JJLS01000167.1	RefSeq	gene	23602	24360	.	+	.	ID=gene-AC56_RS14190;Name=tam;gbkey=Gene;gene=tam;gene_biotype=protein_coding;locus_tag=AC56_RS14190;old_locus_tag=AC56_1701
NZ_JJLS01000167.1	Protein Homology	CDS	23602	24360	.	+	0	ID=cds-WP_001286597.1;Parent=gene-AC56_RS14190;Dbxref=GenBank:WP_001286597.1;Name=WP_001286597.1;Ontology_term=GO:0030798;gbkey=CDS;gene=tam;go_function=trans-aconitate 2-methyltransferase activity|0030798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416036.1;locus_tag=AC56_RS14190;product=trans-aconitate 2-methyltransferase;protein_id=WP_001286597.1;transl_table=11
NZ_JJLS01000167.1	RefSeq	pseudogene	24364	25259	.	-	.	ID=gene-AC56_RS0125895;Name=yneE;gbkey=Gene;gene=yneE;gene_biotype=pseudogene;locus_tag=AC56_RS0125895;pseudo=true
NZ_JJLS01000167.1	Protein Homology	CDS	24364	25259	.	-	0	ID=cds-AC56_RS0125895;Parent=gene-AC56_RS0125895;Note=frameshifted;Ontology_term=GO:0005254;gbkey=CDS;gene=yneE;go_function=chloride channel activity|0005254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416037.2;locus_tag=AC56_RS0125895;product=bestrophin family protein;pseudo=true;transl_table=11
NZ_JJLS01000167.1	RefSeq	gene	25466	26917	.	-	.	ID=gene-AC56_RS14185;Name=uxaB;gbkey=Gene;gene=uxaB;gene_biotype=protein_coding;locus_tag=AC56_RS14185;old_locus_tag=AC56_1704
NZ_JJLS01000167.1	Protein Homology	CDS	25466	26917	.	-	0	ID=cds-WP_000854624.1;Parent=gene-AC56_RS14185;Dbxref=GenBank:WP_000854624.1;Name=WP_000854624.1;gbkey=CDS;gene=uxaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310155.1;locus_tag=AC56_RS14185;product=tagaturonate reductase;protein_id=WP_000854624.1;transl_table=11
NZ_JJLS01000167.1	RefSeq	pseudogene	27144	28021	.	-	.	ID=gene-AC56_RS14180;Name=AC56_RS14180;end_range=28021,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS14180;old_locus_tag=AC56_1706;partial=true;pseudo=true
NZ_JJLS01000167.1	Protein Homology	CDS	27144	28021	.	-	0	ID=cds-AC56_RS14180;Parent=gene-AC56_RS14180;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;end_range=28021,.;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310156.2;locus_tag=AC56_RS14180;partial=true;product=GGDEF domain-containing protein;pseudo=true;transl_table=11
NZ_JJLS01000167.1	RefSeq	gene	28094	28453	.	-	.	ID=gene-AC56_RS14175;Name=yneG;gbkey=Gene;gene=yneG;gene_biotype=protein_coding;locus_tag=AC56_RS14175;old_locus_tag=AC56_1707
NZ_JJLS01000167.1	Protein Homology	CDS	28094	28453	.	-	0	ID=cds-WP_001191019.1;Parent=gene-AC56_RS14175;Dbxref=GenBank:WP_001191019.1;Name=WP_001191019.1;gbkey=CDS;gene=yneG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416040.1;locus_tag=AC56_RS14175;product=DUF4186 domain-containing protein;protein_id=WP_001191019.1;transl_table=11
NZ_JJLS01000167.1	RefSeq	gene	28453	29379	.	-	.	ID=gene-AC56_RS14170;Name=glsB;gbkey=Gene;gene=glsB;gene_biotype=protein_coding;locus_tag=AC56_RS14170;old_locus_tag=AC56_1708
NZ_JJLS01000167.1	Protein Homology	CDS	28453	29379	.	-	0	ID=cds-WP_000257409.1;Parent=gene-AC56_RS14170;Dbxref=GenBank:WP_000257409.1;Name=WP_000257409.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsB;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310158.1;locus_tag=AC56_RS14170;product=glutaminase B;protein_id=WP_000257409.1;transl_table=11
NZ_JJLS01000167.1	RefSeq	gene	29443	30831	.	-	.	ID=gene-AC56_RS14165;Name=sad;gbkey=Gene;gene=sad;gene_biotype=protein_coding;locus_tag=AC56_RS14165;old_locus_tag=AC56_1709
NZ_JJLS01000167.1	Protein Homology	CDS	29443	30831	.	-	0	ID=cds-WP_001338596.1;Parent=gene-AC56_RS14165;Dbxref=GenBank:WP_001338596.1;Name=WP_001338596.1;Ontology_term=GO:0004030;gbkey=CDS;gene=sad;go_function=aldehyde dehydrogenase [NAD(P)+] activity|0004030||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416042.2;locus_tag=AC56_RS14165;product=succinate-semialdehyde dehydrogenase;protein_id=WP_001338596.1;transl_table=11
NZ_JJLS01000167.1	RefSeq	gene	30932	31813	.	+	.	ID=gene-AC56_RS14160;Name=ptrR;gbkey=Gene;gene=ptrR;gene_biotype=protein_coding;locus_tag=AC56_RS14160;old_locus_tag=AC56_1710
NZ_JJLS01000167.1	Protein Homology	CDS	30932	31813	.	+	0	ID=cds-WP_032278288.1;Parent=gene-AC56_RS14160;Dbxref=GenBank:WP_032278288.1;Name=WP_032278288.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptrR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416043.1;locus_tag=AC56_RS14160;product=putrescine utilization regulator PtrR;protein_id=WP_032278288.1;transl_table=11
NZ_JJLS01000167.1	RefSeq	pseudogene	31891	33006	.	+	.	ID=gene-AC56_RS0125900;Name=yneK;gbkey=Gene;gene=yneK;gene_biotype=pseudogene;locus_tag=AC56_RS0125900;pseudo=true
NZ_JJLS01000167.1	Protein Homology	CDS	31891	33006	.	+	0	ID=cds-AC56_RS0125900;Parent=gene-AC56_RS0125900;Note=internal stop;gbkey=CDS;gene=yneK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416044.1;locus_tag=AC56_RS0125900;product=putative protein YneK;pseudo=true;transl_table=11
NZ_JJLS01000167.1	RefSeq	gene	33156	34346	.	+	.	ID=gene-AC56_RS14155;Name=ydeA;gbkey=Gene;gene=ydeA;gene_biotype=protein_coding;locus_tag=AC56_RS14155;old_locus_tag=AC56_1714
NZ_JJLS01000167.1	Protein Homology	CDS	33156	34346	.	+	0	ID=cds-WP_000210799.1;Parent=gene-AC56_RS14155;Dbxref=GenBank:WP_000210799.1;Name=WP_000210799.1;gbkey=CDS;gene=ydeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416045.1;locus_tag=AC56_RS14155;product=L-arabinose MFS transporter;protein_id=WP_000210799.1;transl_table=11
NZ_JJLS01000167.1	RefSeq	gene	34371	35036	.	-	.	ID=gene-AC56_RS14150;Name=marC;gbkey=Gene;gene=marC;gene_biotype=protein_coding;locus_tag=AC56_RS14150;old_locus_tag=AC56_1715
NZ_JJLS01000167.1	Protein Homology	CDS	34371	35036	.	-	0	ID=cds-WP_000885024.1;Parent=gene-AC56_RS14150;Dbxref=GenBank:WP_000885024.1;Name=WP_000885024.1;gbkey=CDS;gene=marC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416046.1;locus_tag=AC56_RS14150;product=NAAT family transporter MarC;protein_id=WP_000885024.1;transl_table=11
NZ_JJLS01000167.1	RefSeq	gene	35247	35681	.	+	.	ID=gene-AC56_RS14145;Name=marR;gbkey=Gene;gene=marR;gene_biotype=protein_coding;locus_tag=AC56_RS14145;old_locus_tag=AC56_1716
NZ_JJLS01000167.1	Protein Homology	CDS	35247	35681	.	+	0	ID=cds-WP_000843419.1;Parent=gene-AC56_RS14145;Dbxref=GenBank:WP_000843419.1;Name=WP_000843419.1;gbkey=CDS;gene=marR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310164.2;locus_tag=AC56_RS14145;product=multiple antibiotic resistance transcriptional regulator MarR;protein_id=WP_000843419.1;transl_table=11
NZ_JJLS01000167.1	RefSeq	gene	35701	36084	.	+	.	ID=gene-AC56_RS0125910;Name=marA;gbkey=Gene;gene=marA;gene_biotype=protein_coding;locus_tag=AC56_RS0125910;old_locus_tag=AC56_1717
NZ_JJLS01000167.1	Protein Homology	CDS	35701	36084	.	+	0	ID=cds-WP_000091199.1;Parent=gene-AC56_RS0125910;Dbxref=GenBank:WP_000091199.1;Name=WP_000091199.1;gbkey=CDS;gene=marA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707445.2;locus_tag=AC56_RS0125910;product=MDR efflux pump AcrAB transcriptional activator MarA;protein_id=WP_000091199.1;transl_table=11
NZ_JJLS01000167.1	RefSeq	gene	36116	36334	.	+	.	ID=gene-AC56_RS14140;Name=marB;gbkey=Gene;gene=marB;gene_biotype=protein_coding;locus_tag=AC56_RS14140;old_locus_tag=AC56_1718
NZ_JJLS01000167.1	Protein Homology	CDS	36116	36334	.	+	0	ID=cds-WP_032278289.1;Parent=gene-AC56_RS14140;Dbxref=GenBank:WP_032278289.1;Name=WP_032278289.1;gbkey=CDS;gene=marB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416049.1;locus_tag=AC56_RS14140;product=multiple antibiotic resistance protein MarB;protein_id=WP_032278289.1;transl_table=11
NZ_JJLS01000167.1	RefSeq	gene	36391	37830	.	-	.	ID=gene-AC56_RS14135;Name=AC56_RS14135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS14135;old_locus_tag=AC56_1719
NZ_JJLS01000167.1	Protein Homology	CDS	36391	37830	.	-	0	ID=cds-WP_001741702.1;Parent=gene-AC56_RS14135;Dbxref=GenBank:WP_001741702.1;Name=WP_001741702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000012594.1;locus_tag=AC56_RS14135;product=6-phospho-beta-glucosidase;protein_id=WP_001741702.1;transl_table=11
NZ_JJLS01000167.1	RefSeq	pseudogene	37855	38435	.	-	.	ID=gene-AC56_RS0125915;Name=AC56_RS0125915;end_range=38435,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0125915;partial=true;pseudo=true
NZ_JJLS01000167.1	Protein Homology	CDS	37855	38435	.	-	0	ID=cds-AC56_RS0125915;Parent=gene-AC56_RS0125915;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0034219,GO:0015288,GO:0016020;end_range=38435,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233185.1;locus_tag=AC56_RS0125915;partial=true;product=carbohydrate porin;pseudo=true;transl_table=11
NZ_JJLS01000167.1	RefSeq	gene	38470	38913	.	+	.	ID=gene-AC56_RS14130;Name=AC56_RS14130;end_range=38913,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS14130;old_locus_tag=AC56_1722;partial=true
NZ_JJLS01000167.1	Protein Homology	CDS	38470	38913	.	+	0	ID=cds-WP_032282680.1;Parent=gene-AC56_RS14130;Dbxref=GenBank:WP_032282680.1;Name=WP_032282680.1;Ontology_term=GO:0004803;end_range=38913,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS14130;partial=true;product=IS5 family transposase;protein_id=WP_032282680.1;transl_table=11
##sequence-region NZ_JJLS01000168.1 1 3128
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000168.1	RefSeq	region	1	3128	.	+	.	ID=NZ_JJLS01000168.1:1..3128;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000168.1	RefSeq	gene	1	281	.	+	.	ID=gene-AC56_RS0125920;Name=AC56_RS0125920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0125920;old_locus_tag=AC56_1723;partial=true;start_range=.,1
NZ_JJLS01000168.1	Protein Homology	CDS	1	281	.	+	2	ID=cds-WP_032282681.1;Parent=gene-AC56_RS0125920;Dbxref=GenBank:WP_032282681.1;Name=WP_032282681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224844.1;locus_tag=AC56_RS0125920;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032282681.1;start_range=.,1;transl_table=11
NZ_JJLS01000168.1	RefSeq	pseudogene	336	1436	.	-	.	ID=gene-AC56_RS14125;Name=AC56_RS14125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS14125;old_locus_tag=AC56_1724;partial=true;pseudo=true;start_range=.,336
NZ_JJLS01000168.1	Protein Homology	CDS	336	1436	.	-	0	ID=cds-AC56_RS14125;Parent=gene-AC56_RS14125;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233185.1;locus_tag=AC56_RS14125;partial=true;product=carbohydrate porin;pseudo=true;start_range=.,336;transl_table=11
NZ_JJLS01000168.1	RefSeq	gene	1492	1803	.	-	.	ID=gene-AC56_RS14120;Name=AC56_RS14120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS14120;old_locus_tag=AC56_1725
NZ_JJLS01000168.1	Protein Homology	CDS	1492	1803	.	-	0	ID=cds-WP_001459752.1;Parent=gene-AC56_RS14120;Dbxref=GenBank:WP_001459752.1;Name=WP_001459752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001314746.1;locus_tag=AC56_RS14120;product=PTS lactose/cellobiose transporter subunit IIA;protein_id=WP_001459752.1;transl_table=11
NZ_JJLS01000168.1	RefSeq	pseudogene	1831	2511	.	-	.	ID=gene-AC56_RS14115;Name=AC56_RS14115;end_range=2511,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS14115;old_locus_tag=AC56_1726;partial=true;pseudo=true
NZ_JJLS01000168.1	Protein Homology	CDS	1831	2511	.	-	0	ID=cds-AC56_RS14115;Parent=gene-AC56_RS14115;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009401,GO:0008982,GO:0016020;end_range=2511,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001736301.1;locus_tag=AC56_RS14115;partial=true;product=PTS transporter subunit EIIC;pseudo=true;transl_table=11
NZ_JJLS01000168.1	RefSeq	gene	2414	2671	.	-	.	ID=gene-AC56_RS33730;Name=AC56_RS33730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33730
NZ_JJLS01000168.1	Protein Homology	CDS	2414	2671	.	-	0	ID=cds-WP_148724944.1;Parent=gene-AC56_RS33730;Dbxref=GenBank:WP_148724944.1;Name=WP_148724944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001340454.1;locus_tag=AC56_RS33730;product=hypothetical protein;protein_id=WP_148724944.1;transl_table=11
NZ_JJLS01000168.1	RefSeq	pseudogene	2653	3128	.	-	.	ID=gene-AC56_RS0125925;Name=AC56_RS0125925;end_range=3128,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0125925;partial=true;pseudo=true
NZ_JJLS01000168.1	Protein Homology	CDS	2653	3128	.	-	2	ID=cds-AC56_RS0125925;Parent=gene-AC56_RS0125925;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=3128,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS0125925;partial=true;product=IS5-like element ISKpn26 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000169.1 1 9416
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000169.1	RefSeq	region	1	9416	.	+	.	ID=NZ_JJLS01000169.1:1..9416;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000169.1	RefSeq	gene	1	374	.	-	.	ID=gene-AC56_RS14110;Name=AC56_RS14110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS14110;old_locus_tag=AC56_1728;partial=true;start_range=.,1
NZ_JJLS01000169.1	Protein Homology	CDS	1	374	.	-	0	ID=cds-WP_032277913.1-2;Parent=gene-AC56_RS14110;Dbxref=GenBank:WP_032277913.1;Name=WP_032277913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS14110;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032277913.1;start_range=.,1;transl_table=11
NZ_JJLS01000169.1	RefSeq	pseudogene	436	828	.	+	.	ID=gene-AC56_RS14105;Name=AC56_RS14105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS14105;old_locus_tag=AC56_1729;partial=true;pseudo=true;start_range=.,436
NZ_JJLS01000169.1	Protein Homology	CDS	436	828	.	+	0	ID=cds-AC56_RS14105;Parent=gene-AC56_RS14105;Note=YdeF%3B uncharacterized member of the major facilitator superfamily (MFS) of transporters%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416051.1;locus_tag=AC56_RS14105;partial=true;product=efflux MFS transporter YdeE;pseudo=true;start_range=.,436;transl_table=11
NZ_JJLS01000169.1	RefSeq	gene	955	1050	.	+	.	ID=gene-AC56_RS0125930;Name=mgtS;gbkey=Gene;gene=mgtS;gene_biotype=protein_coding;locus_tag=AC56_RS0125930
NZ_JJLS01000169.1	Protein Homology	CDS	955	1050	.	+	0	ID=cds-WP_000901367.1;Parent=gene-AC56_RS0125930;Dbxref=GenBank:WP_000901367.1;Name=WP_000901367.1;gbkey=CDS;gene=mgtS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165319.1;locus_tag=AC56_RS0125930;product=protein MgtS;protein_id=WP_000901367.1;transl_table=11
NZ_JJLS01000169.1	RefSeq	pseudogene	1050	1155	.	+	.	ID=gene-AC56_RS33300;Name=mgtT;gbkey=Gene;gene=mgtT;gene_biotype=pseudogene;locus_tag=AC56_RS33300;pseudo=true
NZ_JJLS01000169.1	Protein Homology	CDS	1050	1155	.	+	0	ID=cds-AC56_RS33300;Parent=gene-AC56_RS33300;Note=frameshifted;gbkey=CDS;gene=mgtT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051185.1;locus_tag=AC56_RS33300;product=protein MgtT;pseudo=true;transl_table=11
NZ_JJLS01000169.1	RefSeq	gene	1270	2082	.	-	.	ID=gene-AC56_RS14100;Name=dgcZ;gbkey=Gene;gene=dgcZ;gene_biotype=protein_coding;locus_tag=AC56_RS14100;old_locus_tag=AC56_1730
NZ_JJLS01000169.1	Protein Homology	CDS	1270	2082	.	-	0	ID=cds-WP_032278298.1;Parent=gene-AC56_RS14100;Dbxref=GenBank:WP_032278298.1;Name=WP_032278298.1;gbkey=CDS;gene=dgcZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416052.1;locus_tag=AC56_RS14100;product=diguanylate cyclase;protein_id=WP_032278298.1;transl_table=11
NZ_JJLS01000169.1	RefSeq	gene	2337	2729	.	-	.	ID=gene-AC56_RS14095;Name=ydeI;gbkey=Gene;gene=ydeI;gene_biotype=protein_coding;locus_tag=AC56_RS14095;old_locus_tag=AC56_1731
NZ_JJLS01000169.1	Protein Homology	CDS	2337	2729	.	-	0	ID=cds-WP_000671731.1;Parent=gene-AC56_RS14095;Dbxref=GenBank:WP_000671731.1;Name=WP_000671731.1;gbkey=CDS;gene=ydeI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416054.1;locus_tag=AC56_RS14095;product=YdeI family stress tolerance OB fold protein;protein_id=WP_000671731.1;transl_table=11
NZ_JJLS01000169.1	RefSeq	gene	3005	3523	.	+	.	ID=gene-AC56_RS14090;Name=ydeJ;gbkey=Gene;gene=ydeJ;gene_biotype=protein_coding;locus_tag=AC56_RS14090;old_locus_tag=AC56_1732
NZ_JJLS01000169.1	Protein Homology	CDS	3005	3523	.	+	0	ID=cds-WP_001024746.1;Parent=gene-AC56_RS14090;Dbxref=GenBank:WP_001024746.1;Name=WP_001024746.1;gbkey=CDS;gene=ydeJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416055.1;locus_tag=AC56_RS14090;product=2-oxo-tetronate isomerase;protein_id=WP_001024746.1;transl_table=11
NZ_JJLS01000169.1	RefSeq	gene	3567	5612	.	-	.	ID=gene-AC56_RS14085;Name=dcp;gbkey=Gene;gene=dcp;gene_biotype=protein_coding;locus_tag=AC56_RS14085;old_locus_tag=AC56_1733
NZ_JJLS01000169.1	Protein Homology	CDS	3567	5612	.	-	0	ID=cds-WP_001515364.1;Parent=gene-AC56_RS14085;Dbxref=GenBank:WP_001515364.1;Name=WP_001515364.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=dcp;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310174.1;locus_tag=AC56_RS14085;product=peptidyl-dipeptidase Dcp;protein_id=WP_001515364.1;transl_table=11
NZ_JJLS01000169.1	RefSeq	gene	5749	6495	.	+	.	ID=gene-AC56_RS14080;Name=ydfG;gbkey=Gene;gene=ydfG;gene_biotype=protein_coding;locus_tag=AC56_RS14080;old_locus_tag=AC56_1734
NZ_JJLS01000169.1	Protein Homology	CDS	5749	6495	.	+	0	ID=cds-WP_000636568.1;Parent=gene-AC56_RS14080;Dbxref=GenBank:WP_000636568.1;Name=WP_000636568.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydfG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310175.1;locus_tag=AC56_RS14080;product=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;protein_id=WP_000636568.1;transl_table=11
NZ_JJLS01000169.1	RefSeq	gene	6584	7270	.	+	.	ID=gene-AC56_RS14075;Name=rspR;gbkey=Gene;gene=rspR;gene_biotype=protein_coding;gene_synonym=ydfH;locus_tag=AC56_RS14075;old_locus_tag=AC56_1735
NZ_JJLS01000169.1	Protein Homology	CDS	6584	7270	.	+	0	ID=cds-WP_000215549.1;Parent=gene-AC56_RS14075;Dbxref=GenBank:WP_000215549.1;Name=WP_000215549.1;gbkey=CDS;gene=rspR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310176.1;locus_tag=AC56_RS14075;product=DNA-binding transcriptional regulator rspR;protein_id=WP_000215549.1;transl_table=11
NZ_JJLS01000169.1	RefSeq	gene	7447	7650	.	+	.	ID=gene-AC56_RS14070;Name=ydfZ;gbkey=Gene;gene=ydfZ;gene_biotype=protein_coding;locus_tag=AC56_RS14070;old_locus_tag=AC56_1736
NZ_JJLS01000169.1	Protein Homology	CDS	7447	7650	.	+	0	ID=cds-WP_000214712.1;Parent=gene-AC56_RS14070;Dbxref=GenBank:WP_000214712.1;Name=WP_000214712.1;gbkey=CDS;gene=ydfZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310177.1;locus_tag=AC56_RS14070;product=putative selenium delivery protein YdfZ;protein_id=WP_000214712.1;transl_table=11
NZ_JJLS01000169.1	RefSeq	gene	7686	8957	.	-	.	ID=gene-AC56_RS14065;Name=AC56_RS14065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS14065;old_locus_tag=AC56_1737
NZ_JJLS01000169.1	Protein Homology	CDS	7686	8957	.	-	0	ID=cds-WP_373415201.1;Parent=gene-AC56_RS14065;Dbxref=GenBank:WP_373415201.1;Name=WP_373415201.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001378091.1;locus_tag=AC56_RS14065;product=mannitol dehydrogenase family protein;protein_id=WP_373415201.1;transl_table=11
NZ_JJLS01000169.1	RefSeq	gene	8977	9416	.	+	.	ID=gene-AC56_RS14060;Name=AC56_RS14060;end_range=9416,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS14060;old_locus_tag=AC56_1738;partial=true
NZ_JJLS01000169.1	Protein Homology	CDS	8977	9416	.	+	0	ID=cds-WP_032278941.1;Parent=gene-AC56_RS14060;Dbxref=GenBank:WP_032278941.1;Name=WP_032278941.1;Ontology_term=GO:0004803;end_range=9416,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS14060;partial=true;product=IS5 family transposase;protein_id=WP_032278941.1;transl_table=11
##sequence-region NZ_JJLS01000170.1 1 23552
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000170.1	RefSeq	region	1	23552	.	+	.	ID=NZ_JJLS01000170.1:1..23552;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000170.1	RefSeq	gene	1	282	.	+	.	ID=gene-AC56_RS0125935;Name=AC56_RS0125935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0125935;old_locus_tag=AC56_1739;partial=true;start_range=.,1
NZ_JJLS01000170.1	Protein Homology	CDS	1	282	.	+	0	ID=cds-WP_032175684.1;Parent=gene-AC56_RS0125935;Dbxref=GenBank:WP_032175684.1;Name=WP_032175684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS0125935;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032175684.1;start_range=.,1;transl_table=11
NZ_JJLS01000170.1	RefSeq	pseudogene	337	549	.	-	.	ID=gene-AC56_RS14055;Name=AC56_RS14055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS14055;old_locus_tag=AC56_1740;partial=true;pseudo=true;start_range=.,337
NZ_JJLS01000170.1	Protein Homology	CDS	337	549	.	-	0	ID=cds-AC56_RS14055;Parent=gene-AC56_RS14055;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707435.1;locus_tag=AC56_RS14055;partial=true;product=mannitol dehydrogenase family protein;pseudo=true;start_range=.,337;transl_table=11
NZ_JJLS01000170.1	RefSeq	pseudogene	638	1921	.	-	.	ID=gene-AC56_RS14050;Name=ydfJ;end_range=1921,.;gbkey=Gene;gene=ydfJ;gene_biotype=pseudogene;locus_tag=AC56_RS14050;old_locus_tag=AC56_1741;partial=true;pseudo=true
NZ_JJLS01000170.1	Protein Homology	CDS	638	1921	.	-	0	ID=cds-AC56_RS14050;Parent=gene-AC56_RS14050;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1921,.;gbkey=CDS;gene=ydfJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000582800.1;locus_tag=AC56_RS14050;partial=true;product=MHS family MFS transporter YdfJ;pseudo=true;transl_table=11
NZ_JJLS01000170.1	RefSeq	gene	2524	2637	.	+	.	ID=gene-AC56_RS32745;Name=ynfT;gbkey=Gene;gene=ynfT;gene_biotype=protein_coding;locus_tag=AC56_RS32745
NZ_JJLS01000170.1	Protein Homology	CDS	2524	2637	.	+	0	ID=cds-WP_120795384.1;Parent=gene-AC56_RS32745;Dbxref=GenBank:WP_120795384.1;Name=WP_120795384.1;gbkey=CDS;gene=ynfT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518779.1;locus_tag=AC56_RS32745;product=YnaM/YnfT family protein;protein_id=WP_120795384.1;transl_table=11
NZ_JJLS01000170.1	RefSeq	gene	2706	2939	.	+	.	ID=gene-AC56_RS0125940;Name=ydfK;gbkey=Gene;gene=ydfK;gene_biotype=protein_coding;locus_tag=AC56_RS0125940;old_locus_tag=AC56_1742
NZ_JJLS01000170.1	Protein Homology	CDS	2706	2939	.	+	0	ID=cds-WP_000836768.1;Parent=gene-AC56_RS0125940;Dbxref=GenBank:WP_000836768.1;Name=WP_000836768.1;gbkey=CDS;gene=ydfK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416062.2;locus_tag=AC56_RS0125940;product=cold shock protein YdfK;protein_id=WP_000836768.1;transl_table=11
NZ_JJLS01000170.1	RefSeq	gene	3256	3846	.	+	.	ID=gene-AC56_RS14045;Name=AC56_RS14045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS14045;old_locus_tag=AC56_1743
NZ_JJLS01000170.1	Protein Homology	CDS	3256	3846	.	+	0	ID=cds-WP_000086531.1;Parent=gene-AC56_RS14045;Dbxref=GenBank:WP_000086531.1;Name=WP_000086531.1;Ontology_term=GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415892.1;locus_tag=AC56_RS14045;product=recombinase family protein;protein_id=WP_000086531.1;transl_table=11
NZ_JJLS01000170.1	RefSeq	gene	3944	4519	.	-	.	ID=gene-AC56_RS14040;Name=tfaQ;gbkey=Gene;gene=tfaQ;gene_biotype=protein_coding;locus_tag=AC56_RS14040;old_locus_tag=AC56_1744
NZ_JJLS01000170.1	Protein Homology	CDS	3944	4519	.	-	0	ID=cds-WP_000885634.1;Parent=gene-AC56_RS14040;Dbxref=GenBank:WP_000885634.1;Name=WP_000885634.1;Ontology_term=GO:0098004;gbkey=CDS;gene=tfaQ;go_process=virus tail fiber assembly|0098004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416064.1;locus_tag=AC56_RS14040;product=tail fiber assembly protein;protein_id=WP_000885634.1;transl_table=11
NZ_JJLS01000170.1	RefSeq	gene	4519	7626	.	-	.	ID=gene-AC56_RS29325;Name=AC56_RS29325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS29325
NZ_JJLS01000170.1	Protein Homology	CDS	4519	7626	.	-	0	ID=cds-WP_032278304.1;Parent=gene-AC56_RS29325;Dbxref=GenBank:WP_032278304.1;Name=WP_032278304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001356157.1;locus_tag=AC56_RS29325;product=prophage tail fiber N-terminal domain-containing protein;protein_id=WP_032278304.1;transl_table=11
NZ_JJLS01000170.1	RefSeq	gene	7778	8377	.	-	.	ID=gene-AC56_RS14035;Name=AC56_RS14035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS14035;old_locus_tag=AC56_1748
NZ_JJLS01000170.1	Protein Homology	CDS	7778	8377	.	-	0	ID=cds-WP_001228314.1;Parent=gene-AC56_RS14035;Dbxref=GenBank:WP_001228314.1;Name=WP_001228314.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309834.1;locus_tag=AC56_RS14035;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_001228314.1;transl_table=11
NZ_JJLS01000170.1	RefSeq	pseudogene	8445	11919	.	-	.	ID=gene-AC56_RS14030;Name=gpJ;gbkey=Gene;gene=gpJ;gene_biotype=pseudogene;locus_tag=AC56_RS14030;old_locus_tag=AC56_1750;pseudo=true
NZ_JJLS01000170.1	Protein Homology	CDS	8445	11919	.	-	0	ID=cds-AC56_RS14030;Parent=gene-AC56_RS14030;Note=frameshifted;gbkey=CDS;gene=gpJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309833.1;locus_tag=AC56_RS14030;product=phage attachment tail tip protein J;pseudo=true;transl_table=11
NZ_JJLS01000170.1	RefSeq	gene	12262	12843	.	-	.	ID=gene-AC56_RS14025;Name=AC56_RS14025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS14025;old_locus_tag=AC56_1751
NZ_JJLS01000170.1	Protein Homology	CDS	12262	12843	.	-	0	ID=cds-WP_032266388.1;Parent=gene-AC56_RS14025;Dbxref=GenBank:WP_032266388.1;Name=WP_032266388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310263.2;locus_tag=AC56_RS14025;product=tail assembly protein;protein_id=WP_032266388.1;transl_table=11
NZ_JJLS01000170.1	RefSeq	gene	12840	13583	.	-	.	ID=gene-AC56_RS14020;Name=AC56_RS14020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS14020;old_locus_tag=AC56_1752
NZ_JJLS01000170.1	Protein Homology	CDS	12840	13583	.	-	0	ID=cds-WP_000194709.1;Parent=gene-AC56_RS14020;Dbxref=GenBank:WP_000194709.1;Name=WP_000194709.1;Ontology_term=GO:0006508,GO:0008234,GO:0008235,GO:0008270;gbkey=CDS;go_function=cysteine-type peptidase activity|0008234||IEA,metalloexopeptidase activity|0008235||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310264.2;locus_tag=AC56_RS14020;product=C40 family peptidase;protein_id=WP_000194709.1;transl_table=11
NZ_JJLS01000170.1	RefSeq	gene	13594	14292	.	-	.	ID=gene-AC56_RS14015;Name=AC56_RS14015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS14015;old_locus_tag=AC56_1753
NZ_JJLS01000170.1	Protein Homology	CDS	13594	14292	.	-	0	ID=cds-WP_032278305.1;Parent=gene-AC56_RS14015;Dbxref=GenBank:WP_032278305.1;Name=WP_032278305.1;Ontology_term=GO:0046718,GO:0051536,GO:0030430;gbkey=CDS;go_component=host cell cytoplasm|0030430||IEA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=symbiont entry into host cell|0046718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310191.1;locus_tag=AC56_RS14015;product=phage minor tail protein L;protein_id=WP_032278305.1;transl_table=11
NZ_JJLS01000170.1	RefSeq	gene	14292	14633	.	-	.	ID=gene-AC56_RS14010;Name=AC56_RS14010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS14010;old_locus_tag=AC56_1754
NZ_JJLS01000170.1	Protein Homology	CDS	14292	14633	.	-	0	ID=cds-WP_000807924.1;Parent=gene-AC56_RS14010;Dbxref=GenBank:WP_000807924.1;Name=WP_000807924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310011.1;locus_tag=AC56_RS14010;product=phage tail protein;protein_id=WP_000807924.1;transl_table=11
NZ_JJLS01000170.1	RefSeq	pseudogene	14626	17786	.	-	.	ID=gene-AC56_RS0125950;Name=AC56_RS0125950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0125950;old_locus_tag=AC56_1756;pseudo=true
NZ_JJLS01000170.1	Protein Homology	CDS	14626	17786	.	-	0	ID=cds-AC56_RS0125950;Parent=gene-AC56_RS0125950;Note=frameshifted;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_304285.1;locus_tag=AC56_RS0125950;product=phage tail tape measure protein;pseudo=true;transl_table=11
NZ_JJLS01000170.1	RefSeq	gene	17834	18115	.	-	.	ID=gene-AC56_RS0125955;Name=AC56_RS0125955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0125955;old_locus_tag=AC56_1757
NZ_JJLS01000170.1	Protein Homology	CDS	17834	18115	.	-	0	ID=cds-WP_001234278.1;Parent=gene-AC56_RS0125955;Dbxref=GenBank:WP_001234278.1;Name=WP_001234278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001234272.1;locus_tag=AC56_RS0125955;product=phage tail assembly protein T;protein_id=WP_001234278.1;transl_table=11
NZ_JJLS01000170.1	RefSeq	gene	18139	18513	.	-	.	ID=gene-AC56_RS14005;Name=AC56_RS14005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS14005;old_locus_tag=AC56_1758
NZ_JJLS01000170.1	Protein Homology	CDS	18139	18513	.	-	0	ID=cds-WP_000710949.1;Parent=gene-AC56_RS14005;Dbxref=GenBank:WP_000710949.1;Name=WP_000710949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310269.1;locus_tag=AC56_RS14005;product=phage tail assembly chaperone;protein_id=WP_000710949.1;transl_table=11
NZ_JJLS01000170.1	RefSeq	gene	18528	19244	.	-	.	ID=gene-AC56_RS14000;Name=AC56_RS14000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS14000;old_locus_tag=AC56_1759
NZ_JJLS01000170.1	Protein Homology	CDS	18528	19244	.	-	0	ID=cds-WP_032266389.1;Parent=gene-AC56_RS14000;Dbxref=GenBank:WP_032266389.1;Name=WP_032266389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310270.1;locus_tag=AC56_RS14000;product=major tail subunit;protein_id=WP_032266389.1;transl_table=11
NZ_JJLS01000170.1	RefSeq	gene	19311	19655	.	-	.	ID=gene-AC56_RS13995;Name=gp17;gbkey=Gene;gene=gp17;gene_biotype=protein_coding;locus_tag=AC56_RS13995;old_locus_tag=AC56_1760
NZ_JJLS01000170.1	Protein Homology	CDS	19311	19655	.	-	0	ID=cds-WP_000133388.1;Parent=gene-AC56_RS13995;Dbxref=GenBank:WP_000133388.1;Name=WP_000133388.1;gbkey=CDS;gene=gp17;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309575.1;locus_tag=AC56_RS13995;product=tail completion protein gp17;protein_id=WP_000133388.1;transl_table=11
NZ_JJLS01000170.1	RefSeq	gene	19652	20098	.	-	.	ID=gene-AC56_RS13990;Name=AC56_RS13990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS13990;old_locus_tag=AC56_1761
NZ_JJLS01000170.1	Protein Homology	CDS	19652	20098	.	-	0	ID=cds-WP_000573362.1;Parent=gene-AC56_RS13990;Dbxref=GenBank:WP_000573362.1;Name=WP_000573362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309825.1;locus_tag=AC56_RS13990;product=HK97-gp10 family putative phage morphogenesis protein;protein_id=WP_000573362.1;transl_table=11
NZ_JJLS01000170.1	RefSeq	gene	20095	20445	.	-	.	ID=gene-AC56_RS13985;Name=AC56_RS13985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS13985;old_locus_tag=AC56_1762
NZ_JJLS01000170.1	Protein Homology	CDS	20095	20445	.	-	0	ID=cds-WP_001007905.1;Parent=gene-AC56_RS13985;Dbxref=GenBank:WP_001007905.1;Name=WP_001007905.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309824.1;locus_tag=AC56_RS13985;product=phage head closure protein;protein_id=WP_001007905.1;transl_table=11
NZ_JJLS01000170.1	RefSeq	gene	20455	20781	.	-	.	ID=gene-AC56_RS13980;Name=AC56_RS13980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS13980;old_locus_tag=AC56_1763
NZ_JJLS01000170.1	Protein Homology	CDS	20455	20781	.	-	0	ID=cds-WP_000125990.1;Parent=gene-AC56_RS13980;Dbxref=GenBank:WP_000125990.1;Name=WP_000125990.1;Ontology_term=GO:0016032;gbkey=CDS;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309823.1;locus_tag=AC56_RS13980;product=head-tail connector protein;protein_id=WP_000125990.1;transl_table=11
NZ_JJLS01000170.1	RefSeq	pseudogene	20778	23464	.	-	.	ID=gene-AC56_RS29330;Name=AC56_RS29330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS29330;pseudo=true
NZ_JJLS01000170.1	Protein Homology	CDS	20778	23464	.	-	0	ID=cds-AC56_RS29330;Parent=gene-AC56_RS29330;Note=frameshifted;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309822.1;locus_tag=AC56_RS29330;product=phage portal protein;pseudo=true;transl_table=11
NZ_JJLS01000170.1	RefSeq	pseudogene	23470	23552	.	-	.	ID=gene-AC56_RS33305;Name=AC56_RS33305;end_range=23552,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33305;partial=true;pseudo=true
NZ_JJLS01000170.1	Protein Homology	CDS	23470	23552	.	-	2	ID=cds-AC56_RS33305;Parent=gene-AC56_RS33305;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=23552,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001063105.1;locus_tag=AC56_RS33305;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000171.1 1 30833
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000171.1	RefSeq	region	1	30833	.	+	.	ID=NZ_JJLS01000171.1:1..30833;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000171.1	RefSeq	pseudogene	1	759	.	-	.	ID=gene-AC56_RS13965;Name=iucC;gbkey=Gene;gene=iucC;gene_biotype=pseudogene;locus_tag=AC56_RS13965;old_locus_tag=AC56_1766;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000171.1	Protein Homology	CDS	1	759	.	-	0	ID=cds-AC56_RS13965;Parent=gene-AC56_RS13965;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=iucC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709456.1;locus_tag=AC56_RS13965;partial=true;product=NIS family aerobactin synthetase IucC;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000171.1	RefSeq	gene	759	1706	.	-	.	ID=gene-AC56_RS13960;Name=iucB;gbkey=Gene;gene=iucB;gene_biotype=protein_coding;locus_tag=AC56_RS13960;old_locus_tag=AC56_1767
NZ_JJLS01000171.1	Protein Homology	CDS	759	1706	.	-	0	ID=cds-WP_023149674.1;Parent=gene-AC56_RS13960;Dbxref=GenBank:WP_023149674.1;Name=WP_023149674.1;gbkey=CDS;gene=iucB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709455.1;locus_tag=AC56_RS13960;product=N(6)-hydroxylysine O-acetyltransferase IucB;protein_id=WP_023149674.1;transl_table=11
NZ_JJLS01000171.1	RefSeq	gene	1707	3431	.	-	.	ID=gene-AC56_RS13955;Name=iucA;gbkey=Gene;gene=iucA;gene_biotype=protein_coding;locus_tag=AC56_RS13955;old_locus_tag=AC56_1768
NZ_JJLS01000171.1	Protein Homology	CDS	1707	3431	.	-	0	ID=cds-WP_001299620.1;Parent=gene-AC56_RS13955;Dbxref=GenBank:WP_001299620.1;Name=WP_001299620.1;gbkey=CDS;gene=iucA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001314127.1;locus_tag=AC56_RS13955;product=aerobactin synthase IucA;protein_id=WP_001299620.1;transl_table=11
NZ_JJLS01000171.1	RefSeq	gene	3567	4760	.	+	.	ID=gene-AC56_RS13950;Name=AC56_RS13950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS13950;old_locus_tag=AC56_1769
NZ_JJLS01000171.1	Protein Homology	CDS	3567	4760	.	+	0	ID=cds-WP_000074481.1;Parent=gene-AC56_RS13950;Dbxref=GenBank:WP_000074481.1;Name=WP_000074481.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709453.1;locus_tag=AC56_RS13950;product=MFS transporter;protein_id=WP_000074481.1;transl_table=11
NZ_JJLS01000171.1	RefSeq	pseudogene	5146	6143	.	+	.	ID=gene-AC56_RS13945;Name=AC56_RS13945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS13945;old_locus_tag=AC56_1770;partial=true;pseudo=true;start_range=.,5146
NZ_JJLS01000171.1	Protein Homology	CDS	5146	6143	.	+	0	ID=cds-AC56_RS13945;Parent=gene-AC56_RS13945;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611570.1;locus_tag=AC56_RS13945;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,5146;transl_table=11
NZ_JJLS01000171.1	cmsearch	sequence_feature	5211	5327	.	+	.	ID=id-AC56_RS13945;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS13945;pseudo=true
NZ_JJLS01000171.1	RefSeq	gene	6403	6936	.	-	.	ID=gene-AC56_RS13940;Name=AC56_RS13940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS13940;old_locus_tag=AC56_1771
NZ_JJLS01000171.1	Protein Homology	CDS	6403	6936	.	-	0	ID=cds-WP_000992072.1;Parent=gene-AC56_RS13940;Dbxref=GenBank:WP_000992072.1;Name=WP_000992072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309123.1;locus_tag=AC56_RS13940;product=lysozyme;protein_id=WP_000992072.1;transl_table=11
NZ_JJLS01000171.1	RefSeq	gene	7042	7314	.	+	.	ID=gene-AC56_RS13935;Name=AC56_RS13935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS13935;old_locus_tag=AC56_1772
NZ_JJLS01000171.1	Protein Homology	CDS	7042	7314	.	+	0	ID=cds-WP_000369850.1;Parent=gene-AC56_RS13935;Dbxref=GenBank:WP_000369850.1;Name=WP_000369850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000369850.1;locus_tag=AC56_RS13935;product=hypothetical protein;protein_id=WP_000369850.1;transl_table=11
NZ_JJLS01000171.1	RefSeq	gene	7280	7624	.	-	.	ID=gene-AC56_RS13930;Name=AC56_RS13930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS13930;old_locus_tag=AC56_1773
NZ_JJLS01000171.1	Protein Homology	CDS	7280	7624	.	-	0	ID=cds-WP_000193278.1;Parent=gene-AC56_RS13930;Dbxref=GenBank:WP_000193278.1;Name=WP_000193278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016235607.1;locus_tag=AC56_RS13930;product=YdfR family protein;protein_id=WP_000193278.1;transl_table=11
NZ_JJLS01000171.1	RefSeq	gene	7629	7844	.	-	.	ID=gene-AC56_RS13925;Name=AC56_RS13925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS13925;old_locus_tag=AC56_1774
NZ_JJLS01000171.1	Protein Homology	CDS	7629	7844	.	-	0	ID=cds-WP_000284510.1;Parent=gene-AC56_RS13925;Dbxref=GenBank:WP_000284510.1;Name=WP_000284510.1;Ontology_term=GO:0140911,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=pore-forming activity|0140911||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309239.1;locus_tag=AC56_RS13925;product=class II holin family protein;protein_id=WP_000284510.1;transl_table=11
NZ_JJLS01000171.1	RefSeq	gene	7995	9851	.	-	.	ID=gene-AC56_RS13920;Name=AC56_RS13920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS13920;old_locus_tag=AC56_1775
NZ_JJLS01000171.1	Protein Homology	CDS	7995	9851	.	-	0	ID=cds-WP_032278306.1;Parent=gene-AC56_RS13920;Dbxref=GenBank:WP_032278306.1;Name=WP_032278306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309808.1;locus_tag=AC56_RS13920;product=SASA family carbohydrate esterase;protein_id=WP_032278306.1;transl_table=11
NZ_JJLS01000171.1	RefSeq	pseudogene	10607	10732	.	+	.	ID=gene-AC56_RS33310;Name=AC56_RS33310;end_range=10732,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33310;partial=true;pseudo=true
NZ_JJLS01000171.1	Protein Homology	CDS	10607	10732	.	+	0	ID=cds-AC56_RS33310;Parent=gene-AC56_RS33310;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=10732,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013009199.1;locus_tag=AC56_RS33310;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_JJLS01000171.1	RefSeq	gene	10827	10903	.	-	.	ID=gene-AC56_RS13915;Name=AC56_RS13915;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS13915;old_locus_tag=AC56_1776
NZ_JJLS01000171.1	tRNAscan-SE	tRNA	10827	10903	.	-	.	ID=rna-AC56_RS13915;Parent=gene-AC56_RS13915;anticodon=(pos:complement(10867..10869));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS13915;product=tRNA-Arg
NZ_JJLS01000171.1	tRNAscan-SE	exon	10827	10903	.	-	.	ID=exon-AC56_RS13915-1;Parent=rna-AC56_RS13915;anticodon=(pos:complement(10867..10869));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS13915;product=tRNA-Arg
NZ_JJLS01000171.1	RefSeq	gene	10917	10993	.	-	.	ID=gene-AC56_RS0125965;Name=AC56_RS0125965;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS0125965
NZ_JJLS01000171.1	tRNAscan-SE	tRNA	10917	10993	.	-	.	ID=rna-AC56_RS0125965;Parent=gene-AC56_RS0125965;anticodon=(pos:complement(10957..10959));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS0125965;product=tRNA-Arg
NZ_JJLS01000171.1	tRNAscan-SE	exon	10917	10993	.	-	.	ID=exon-AC56_RS0125965-1;Parent=rna-AC56_RS0125965;anticodon=(pos:complement(10957..10959));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS0125965;product=tRNA-Arg
NZ_JJLS01000171.1	RefSeq	gene	11001	11076	.	-	.	ID=gene-AC56_RS13910;Name=AC56_RS13910;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS13910;old_locus_tag=AC56_1777
NZ_JJLS01000171.1	tRNAscan-SE	tRNA	11001	11076	.	-	.	ID=rna-AC56_RS13910;Parent=gene-AC56_RS13910;anticodon=(pos:complement(11041..11043));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS13910;product=tRNA-Ile
NZ_JJLS01000171.1	tRNAscan-SE	exon	11001	11076	.	-	.	ID=exon-AC56_RS13910-1;Parent=rna-AC56_RS13910;anticodon=(pos:complement(11041..11043));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS13910;product=tRNA-Ile
NZ_JJLS01000171.1	RefSeq	gene	11126	12175	.	-	.	ID=gene-AC56_RS13905;Name=AC56_RS13905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS13905;old_locus_tag=AC56_1778
NZ_JJLS01000171.1	Protein Homology	CDS	11126	12175	.	-	0	ID=cds-WP_000935515.1;Parent=gene-AC56_RS13905;Dbxref=GenBank:WP_000935515.1;Name=WP_000935515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575625.1;locus_tag=AC56_RS13905;product=DNA-methyltransferase;protein_id=WP_000935515.1;transl_table=11
NZ_JJLS01000171.1	RefSeq	gene	12326	12523	.	-	.	ID=gene-AC56_RS13900;Name=AC56_RS13900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS13900;old_locus_tag=AC56_1779
NZ_JJLS01000171.1	Protein Homology	CDS	12326	12523	.	-	0	ID=cds-WP_000917767.1;Parent=gene-AC56_RS13900;Dbxref=GenBank:WP_000917767.1;Name=WP_000917767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309806.2;locus_tag=AC56_RS13900;product=hypothetical protein;protein_id=WP_000917767.1;transl_table=11
NZ_JJLS01000171.1	RefSeq	gene	12750	13571	.	-	.	ID=gene-AC56_RS13895;Name=AC56_RS13895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS13895;old_locus_tag=AC56_1780
NZ_JJLS01000171.1	Protein Homology	CDS	12750	13571	.	-	0	ID=cds-WP_000762881.1;Parent=gene-AC56_RS13895;Dbxref=GenBank:WP_000762881.1;Name=WP_000762881.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707426.1;locus_tag=AC56_RS13895;product=antitermination protein;protein_id=WP_000762881.1;transl_table=11
NZ_JJLS01000171.1	RefSeq	gene	13568	13948	.	-	.	ID=gene-AC56_RS13890;Name=AC56_RS13890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS13890;old_locus_tag=AC56_1781
NZ_JJLS01000171.1	Protein Homology	CDS	13568	13948	.	-	0	ID=cds-WP_000140014.1;Parent=gene-AC56_RS13890;Dbxref=GenBank:WP_000140014.1;Name=WP_000140014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000140009.1;locus_tag=AC56_RS13890;product=RusA family crossover junction endodeoxyribonuclease;protein_id=WP_000140014.1;transl_table=11
NZ_JJLS01000171.1	RefSeq	gene	13949	15007	.	-	.	ID=gene-AC56_RS13885;Name=AC56_RS13885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS13885;old_locus_tag=AC56_1782
NZ_JJLS01000171.1	Protein Homology	CDS	13949	15007	.	-	0	ID=cds-WP_001580491.1;Parent=gene-AC56_RS13885;Dbxref=GenBank:WP_001580491.1;Name=WP_001580491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001265086.1;locus_tag=AC56_RS13885;product=DUF968 domain-containing protein;protein_id=WP_001580491.1;transl_table=11
NZ_JJLS01000171.1	RefSeq	gene	15009	15287	.	-	.	ID=gene-AC56_RS0125970;Name=AC56_RS0125970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0125970
NZ_JJLS01000171.1	Protein Homology	CDS	15009	15287	.	-	0	ID=cds-WP_032183375.1;Parent=gene-AC56_RS0125970;Dbxref=GenBank:WP_032183375.1;Name=WP_032183375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707878.1;locus_tag=AC56_RS0125970;product=hypothetical protein;protein_id=WP_032183375.1;transl_table=11
NZ_JJLS01000171.1	RefSeq	gene	15696	17960	.	-	.	ID=gene-AC56_RS13880;Name=iteS;gbkey=Gene;gene=iteS;gene_biotype=protein_coding;locus_tag=AC56_RS13880;old_locus_tag=AC56_1785
NZ_JJLS01000171.1	Protein Homology	CDS	15696	17960	.	-	0	ID=cds-WP_032278307.1;Parent=gene-AC56_RS13880;Dbxref=GenBank:WP_032278307.1;Name=WP_032278307.1;Ontology_term=GO:0006508,GO:0051607,GO:0008236;gbkey=CDS;gene=iteS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551050.1;locus_tag=AC56_RS13880;product=S8 family anti-phage peptidase IteS;protein_id=WP_032278307.1;transl_table=11
NZ_JJLS01000171.1	RefSeq	gene	17935	19089	.	-	.	ID=gene-AC56_RS13875;Name=iteA;gbkey=Gene;gene=iteA;gene_biotype=protein_coding;locus_tag=AC56_RS13875;old_locus_tag=AC56_1786
NZ_JJLS01000171.1	Protein Homology	CDS	17935	19089	.	-	0	ID=cds-WP_000385105.1;Parent=gene-AC56_RS13875;Dbxref=GenBank:WP_000385105.1;Name=WP_000385105.1;Ontology_term=GO:0051607,GO:0005524,GO:0016887;gbkey=CDS;gene=iteA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000385105.1;locus_tag=AC56_RS13875;product=anti-phage ATPase IteA;protein_id=WP_000385105.1;transl_table=11
NZ_JJLS01000171.1	RefSeq	gene	19283	19714	.	-	.	ID=gene-AC56_RS13870;Name=AC56_RS13870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS13870;old_locus_tag=AC56_1787
NZ_JJLS01000171.1	Protein Homology	CDS	19283	19714	.	-	0	ID=cds-WP_001403739.1;Parent=gene-AC56_RS13870;Dbxref=GenBank:WP_001403739.1;Name=WP_001403739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001141107.1;locus_tag=AC56_RS13870;product=DUF977 family protein;protein_id=WP_001403739.1;transl_table=11
NZ_JJLS01000171.1	RefSeq	gene	19730	20491	.	-	.	ID=gene-AC56_RS13865;Name=AC56_RS13865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS13865;old_locus_tag=AC56_1788
NZ_JJLS01000171.1	Protein Homology	CDS	19730	20491	.	-	0	ID=cds-WP_032183380.1;Parent=gene-AC56_RS13865;Dbxref=GenBank:WP_032183380.1;Name=WP_032183380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309973.2;locus_tag=AC56_RS13865;product=DUF1627 domain-containing protein;protein_id=WP_032183380.1;transl_table=11
NZ_JJLS01000171.1	RefSeq	gene	20514	21260	.	-	.	ID=gene-AC56_RS13860;Name=ydaV;gbkey=Gene;gene=ydaV;gene_biotype=protein_coding;locus_tag=AC56_RS13860;old_locus_tag=AC56_1789
NZ_JJLS01000171.1	Protein Homology	CDS	20514	21260	.	-	0	ID=cds-WP_001759950.1;Parent=gene-AC56_RS13860;Dbxref=GenBank:WP_001759950.1;Name=WP_001759950.1;gbkey=CDS;gene=ydaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309972.1;locus_tag=AC56_RS13860;product=ATP-binding protein;protein_id=WP_001759950.1;transl_table=11
NZ_JJLS01000171.1	RefSeq	gene	21267	22229	.	-	.	ID=gene-AC56_RS13855;Name=AC56_RS13855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS13855;old_locus_tag=AC56_1790
NZ_JJLS01000171.1	Protein Homology	CDS	21267	22229	.	-	0	ID=cds-WP_071998951.1;Parent=gene-AC56_RS13855;Dbxref=GenBank:WP_071998951.1;Name=WP_071998951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310303.2;locus_tag=AC56_RS13855;product=helix-turn-helix domain-containing protein;protein_id=WP_071998951.1;transl_table=11
NZ_JJLS01000171.1	RefSeq	gene	22252	22677	.	-	.	ID=gene-AC56_RS13850;Name=AC56_RS13850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS13850;old_locus_tag=AC56_1791
NZ_JJLS01000171.1	Protein Homology	CDS	22252	22677	.	-	0	ID=cds-WP_001504533.1;Parent=gene-AC56_RS13850;Dbxref=GenBank:WP_001504533.1;Name=WP_001504533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310304.1;locus_tag=AC56_RS13850;product=toxin YdaT family protein;protein_id=WP_001504533.1;transl_table=11
NZ_JJLS01000171.1	RefSeq	gene	22661	22942	.	-	.	ID=gene-AC56_RS0125975;Name=AC56_RS0125975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0125975
NZ_JJLS01000171.1	Protein Homology	CDS	22661	22942	.	-	0	ID=cds-WP_000391950.1;Parent=gene-AC56_RS0125975;Dbxref=GenBank:WP_000391950.1;Name=WP_000391950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000391949.1;locus_tag=AC56_RS0125975;product=transcriptional regulator;protein_id=WP_000391950.1;transl_table=11
NZ_JJLS01000171.1	RefSeq	gene	23043	23462	.	+	.	ID=gene-AC56_RS0125980;Name=AC56_RS0125980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0125980
NZ_JJLS01000171.1	Protein Homology	CDS	23043	23462	.	+	0	ID=cds-WP_000362153.1;Parent=gene-AC56_RS0125980;Dbxref=GenBank:WP_000362153.1;Name=WP_000362153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000362153.1;locus_tag=AC56_RS0125980;product=hypothetical protein;protein_id=WP_000362153.1;transl_table=11
NZ_JJLS01000171.1	RefSeq	gene	23728	23880	.	+	.	ID=gene-AC56_RS0125985;Name=AC56_RS0125985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0125985;old_locus_tag=AC56_1793
NZ_JJLS01000171.1	Protein Homology	CDS	23728	23880	.	+	0	ID=cds-WP_000367380.1;Parent=gene-AC56_RS0125985;Dbxref=GenBank:WP_000367380.1;Name=WP_000367380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000367379.1;locus_tag=AC56_RS0125985;product=DUF1391 family protein;protein_id=WP_000367380.1;transl_table=11
NZ_JJLS01000171.1	RefSeq	gene	23892	24293	.	+	.	ID=gene-AC56_RS13845;Name=AC56_RS13845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS13845;old_locus_tag=AC56_1794
NZ_JJLS01000171.1	Protein Homology	CDS	23892	24293	.	+	0	ID=cds-WP_001339605.1;Parent=gene-AC56_RS13845;Dbxref=GenBank:WP_001339605.1;Name=WP_001339605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000394555.1;locus_tag=AC56_RS13845;product=hypothetical protein;protein_id=WP_001339605.1;transl_table=11
NZ_JJLS01000171.1	RefSeq	gene	24253	24531	.	-	.	ID=gene-AC56_RS13840;Name=AC56_RS13840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS13840;old_locus_tag=AC56_1795
NZ_JJLS01000171.1	Protein Homology	CDS	24253	24531	.	-	0	ID=cds-WP_000358771.1;Parent=gene-AC56_RS13840;Dbxref=GenBank:WP_000358771.1;Name=WP_000358771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000358768.1;locus_tag=AC56_RS13840;product=hypothetical protein;protein_id=WP_000358771.1;transl_table=11
NZ_JJLS01000171.1	RefSeq	gene	25091	25279	.	+	.	ID=gene-AC56_RS13835;Name=dicB;gbkey=Gene;gene=dicB;gene_biotype=protein_coding;locus_tag=AC56_RS13835;old_locus_tag=AC56_1797
NZ_JJLS01000171.1	Protein Homology	CDS	25091	25279	.	+	0	ID=cds-WP_000449192.1;Parent=gene-AC56_RS13835;Dbxref=GenBank:WP_000449192.1;Name=WP_000449192.1;gbkey=CDS;gene=dicB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309788.1;locus_tag=AC56_RS13835;product=cell division inhibition protein DicB;protein_id=WP_000449192.1;transl_table=11
NZ_JJLS01000171.1	RefSeq	pseudogene	25276	25466	.	+	.	ID=gene-AC56_RS0125995;Name=AC56_RS0125995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0125995;pseudo=true
NZ_JJLS01000171.1	Protein Homology	CDS	25276	25466	.	+	0	ID=cds-AC56_RS0125995;Parent=gene-AC56_RS0125995;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309787.1;locus_tag=AC56_RS0125995;product=DUF1482 family protein;pseudo=true;transl_table=11
NZ_JJLS01000171.1	RefSeq	gene	25559	28030	.	+	.	ID=gene-AC56_RS13830;Name=AC56_RS13830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS13830;old_locus_tag=AC56_1798
NZ_JJLS01000171.1	Protein Homology	CDS	25559	28030	.	+	0	ID=cds-WP_032282685.1;Parent=gene-AC56_RS13830;Dbxref=GenBank:WP_032282685.1;Name=WP_032282685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309786.1;locus_tag=AC56_RS13830;product=exonuclease;protein_id=WP_032282685.1;transl_table=11
NZ_JJLS01000171.1	RefSeq	gene	28095	28343	.	+	.	ID=gene-AC56_RS0126000;Name=AC56_RS0126000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0126000
NZ_JJLS01000171.1	Protein Homology	CDS	28095	28343	.	+	0	ID=cds-WP_000113189.1;Parent=gene-AC56_RS0126000;Dbxref=GenBank:WP_000113189.1;Name=WP_000113189.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309785.1;locus_tag=AC56_RS0126000;product=excisionase;protein_id=WP_000113189.1;transl_table=11
NZ_JJLS01000171.1	RefSeq	gene	28321	29451	.	+	.	ID=gene-AC56_RS13825;Name=AC56_RS13825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS13825;old_locus_tag=AC56_1799
NZ_JJLS01000171.1	Protein Homology	CDS	28321	29451	.	+	0	ID=cds-WP_000113700.1;Parent=gene-AC56_RS13825;Dbxref=GenBank:WP_000113700.1;Name=WP_000113700.1;Ontology_term=GO:0015074,GO:0003677,GO:0008907;gbkey=CDS;go_function=DNA binding|0003677||IEA,integrase activity|0008907||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309784.1;locus_tag=AC56_RS13825;product=phage integrase Arm DNA-binding domain-containing protein;protein_id=WP_000113700.1;transl_table=11
NZ_JJLS01000171.1	RefSeq	gene	29497	30135	.	-	.	ID=gene-AC56_RS13820;Name=ompW;gbkey=Gene;gene=ompW;gene_biotype=protein_coding;locus_tag=AC56_RS13820;old_locus_tag=AC56_1800
NZ_JJLS01000171.1	Protein Homology	CDS	29497	30135	.	-	0	ID=cds-WP_000737224.1;Parent=gene-AC56_RS13820;Dbxref=GenBank:WP_000737224.1;Name=WP_000737224.1;Ontology_term=GO:0019867;gbkey=CDS;gene=ompW;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309783.1;locus_tag=AC56_RS13820;product=outer membrane protein OmpW;protein_id=WP_000737224.1;transl_table=11
NZ_JJLS01000171.1	RefSeq	pseudogene	30246	30833	.	-	.	ID=gene-AC56_RS13815;Name=AC56_RS13815;end_range=30833,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS13815;old_locus_tag=AC56_1801;partial=true;pseudo=true
NZ_JJLS01000171.1	Protein Homology	CDS	30246	30833	.	-	1	ID=cds-AC56_RS13815;Parent=gene-AC56_RS13815;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0004803;end_range=30833,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS13815;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000172.1 1 43505
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000172.1	RefSeq	region	1	43505	.	+	.	ID=NZ_JJLS01000172.1:1..43505;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000172.1	RefSeq	gene	1	1926	.	+	.	ID=gene-AC56_RS27765;Name=AC56_RS27765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS27765;old_locus_tag=AC56_1802;partial=true;start_range=.,1
NZ_JJLS01000172.1	Protein Homology	CDS	1	1926	.	+	0	ID=cds-WP_050440200.1;Parent=gene-AC56_RS27765;Dbxref=GenBank:WP_050440200.1;Name=WP_050440200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310313.1;locus_tag=AC56_RS27765;partial=true;product=exonuclease;protein_id=WP_050440200.1;start_range=.,1;transl_table=11
NZ_JJLS01000172.1	RefSeq	gene	1999	2250	.	+	.	ID=gene-AC56_RS13810;Name=AC56_RS13810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS13810;old_locus_tag=AC56_1803
NZ_JJLS01000172.1	Protein Homology	CDS	1999	2250	.	+	0	ID=cds-WP_000005552.1;Parent=gene-AC56_RS13810;Dbxref=GenBank:WP_000005552.1;Name=WP_000005552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000005552.1;locus_tag=AC56_RS13810;product=excisionase family protein;protein_id=WP_000005552.1;transl_table=11
NZ_JJLS01000172.1	RefSeq	gene	2285	3565	.	+	.	ID=gene-AC56_RS13805;Name=AC56_RS13805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS13805;old_locus_tag=AC56_1804
NZ_JJLS01000172.1	Protein Homology	CDS	2285	3565	.	+	0	ID=cds-WP_000876976.1;Parent=gene-AC56_RS13805;Dbxref=GenBank:WP_000876976.1;Name=WP_000876976.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686441.1;locus_tag=AC56_RS13805;product=tyrosine-type recombinase/integrase;protein_id=WP_000876976.1;transl_table=11
NZ_JJLS01000172.1	RefSeq	gene	3753	4772	.	-	.	ID=gene-AC56_RS13800;Name=rspB;gbkey=Gene;gene=rspB;gene_biotype=protein_coding;locus_tag=AC56_RS13800;old_locus_tag=AC56_1805
NZ_JJLS01000172.1	Protein Homology	CDS	3753	4772	.	-	0	ID=cds-WP_032278310.1;Parent=gene-AC56_RS13800;Dbxref=GenBank:WP_032278310.1;Name=WP_032278310.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;gene=rspB;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416097.1;locus_tag=AC56_RS13800;product=Zn-dependent oxidoreductase;protein_id=WP_032278310.1;transl_table=11
NZ_JJLS01000172.1	RefSeq	gene	4784	5998	.	-	.	ID=gene-AC56_RS13795;Name=rspA;gbkey=Gene;gene=rspA;gene_biotype=protein_coding;locus_tag=AC56_RS13795;old_locus_tag=AC56_1806
NZ_JJLS01000172.1	Protein Homology	CDS	4784	5998	.	-	0	ID=cds-WP_032278311.1;Parent=gene-AC56_RS13795;Dbxref=GenBank:WP_032278311.1;Name=WP_032278311.1;gbkey=CDS;gene=rspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001625315.1;locus_tag=AC56_RS13795;product=starvation-sensing protein RspA;protein_id=WP_032278311.1;transl_table=11
NZ_JJLS01000172.1	RefSeq	gene	6204	6530	.	-	.	ID=gene-AC56_RS13790;Name=ynfA;gbkey=Gene;gene=ynfA;gene_biotype=protein_coding;locus_tag=AC56_RS13790;old_locus_tag=AC56_1807
NZ_JJLS01000172.1	Protein Homology	CDS	6204	6530	.	-	0	ID=cds-WP_000598292.1;Parent=gene-AC56_RS13790;Dbxref=GenBank:WP_000598292.1;Name=WP_000598292.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ynfA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416099.1;locus_tag=AC56_RS13790;product=YnfA family protein;protein_id=WP_000598292.1;transl_table=11
NZ_JJLS01000172.1	RefSeq	gene	6665	7006	.	+	.	ID=gene-AC56_RS13785;Name=ynfB;gbkey=Gene;gene=ynfB;gene_biotype=protein_coding;locus_tag=AC56_RS13785;old_locus_tag=AC56_1808
NZ_JJLS01000172.1	Protein Homology	CDS	6665	7006	.	+	0	ID=cds-WP_000705211.1;Parent=gene-AC56_RS13785;Dbxref=GenBank:WP_000705211.1;Name=WP_000705211.1;gbkey=CDS;gene=ynfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416100.1;locus_tag=AC56_RS13785;product=DUF1283 family protein;protein_id=WP_000705211.1;transl_table=11
NZ_JJLS01000172.1	RefSeq	gene	7041	7601	.	+	.	ID=gene-AC56_RS13780;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=AC56_RS13780;old_locus_tag=AC56_1809
NZ_JJLS01000172.1	Protein Homology	CDS	7041	7601	.	+	0	ID=cds-WP_001138581.1;Parent=gene-AC56_RS13780;Dbxref=GenBank:WP_001138581.1;Name=WP_001138581.1;Ontology_term=GO:0008080;gbkey=CDS;gene=speG;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310317.1;locus_tag=AC56_RS13780;product=spermidine N1-acetyltransferase;protein_id=WP_001138581.1;transl_table=11
NZ_JJLS01000172.1	RefSeq	gene	7604	8314	.	-	.	ID=gene-AC56_RS13775;Name=ynfC;gbkey=Gene;gene=ynfC;gene_biotype=protein_coding;locus_tag=AC56_RS13775;old_locus_tag=AC56_1810
NZ_JJLS01000172.1	Protein Homology	CDS	7604	8314	.	-	0	ID=cds-WP_001321287.1;Parent=gene-AC56_RS13775;Dbxref=GenBank:WP_001321287.1;Name=WP_001321287.1;Ontology_term=GO:0005886;gbkey=CDS;gene=ynfC;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416102.2;locus_tag=AC56_RS13775;product=YnfC family lipoprotein;protein_id=WP_001321287.1;transl_table=11
NZ_JJLS01000172.1	RefSeq	gene	8422	8727	.	+	.	ID=gene-AC56_RS13770;Name=ynfD;gbkey=Gene;gene=ynfD;gene_biotype=protein_coding;locus_tag=AC56_RS13770;old_locus_tag=AC56_1811
NZ_JJLS01000172.1	Protein Homology	CDS	8422	8727	.	+	0	ID=cds-WP_001300836.1;Parent=gene-AC56_RS13770;Dbxref=GenBank:WP_001300836.1;Name=WP_001300836.1;gbkey=CDS;gene=ynfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416103.2;locus_tag=AC56_RS13770;product=DUF1161 domain-containing protein;protein_id=WP_001300836.1;transl_table=11
NZ_JJLS01000172.1	RefSeq	pseudogene	8926	11352	.	+	.	ID=gene-AC56_RS13760;Name=ynfE;gbkey=Gene;gene=ynfE;gene_biotype=pseudogene;locus_tag=AC56_RS13760;old_locus_tag=AC56_1813;pseudo=true
NZ_JJLS01000172.1	Protein Homology	CDS	8926	11352	.	+	0	ID=cds-AC56_RS13760;Parent=gene-AC56_RS13760;Note=internal stop;gbkey=CDS;gene=ynfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416104.1;locus_tag=AC56_RS13760;product=selenate/tellurate reductase subunit YnfE;pseudo=true;transl_table=11
NZ_JJLS01000172.1	RefSeq	gene	11413	13836	.	+	.	ID=gene-AC56_RS13755;Name=ynfF;gbkey=Gene;gene=ynfF;gene_biotype=protein_coding;locus_tag=AC56_RS13755;old_locus_tag=AC56_1814
NZ_JJLS01000172.1	Protein Homology	CDS	11413	13836	.	+	0	ID=cds-WP_001340362.1;Parent=gene-AC56_RS13755;Dbxref=GenBank:WP_001340362.1;Name=WP_001340362.1;gbkey=CDS;gene=ynfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416105.4;locus_tag=AC56_RS13755;product=selenate/tellurate reductase subunit YnfF;protein_id=WP_001340362.1;transl_table=11
NZ_JJLS01000172.1	RefSeq	gene	13847	14464	.	+	.	ID=gene-AC56_RS13750;Name=ynfG;gbkey=Gene;gene=ynfG;gene_biotype=protein_coding;locus_tag=AC56_RS13750;old_locus_tag=AC56_1815
NZ_JJLS01000172.1	Protein Homology	CDS	13847	14464	.	+	0	ID=cds-WP_032278314.1;Parent=gene-AC56_RS13750;Dbxref=GenBank:WP_032278314.1;Name=WP_032278314.1;gbkey=CDS;gene=ynfG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=AC56_RS13750;product=DMSO reductase like molybdoenzyme iron-sulfur subunit YnfG;protein_id=WP_032278314.1;transl_table=11
NZ_JJLS01000172.1	RefSeq	gene	14466	15320	.	+	.	ID=gene-AC56_RS13745;Name=ynfH;gbkey=Gene;gene=ynfH;gene_biotype=protein_coding;locus_tag=AC56_RS13745;old_locus_tag=AC56_1816
NZ_JJLS01000172.1	Protein Homology	CDS	14466	15320	.	+	0	ID=cds-WP_000526503.1;Parent=gene-AC56_RS13745;Dbxref=GenBank:WP_000526503.1;Name=WP_000526503.1;gbkey=CDS;gene=ynfH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416107.1;locus_tag=AC56_RS13745;product=selenate reductase membrane anchor subunit YnfH;protein_id=WP_000526503.1;transl_table=11
NZ_JJLS01000172.1	RefSeq	gene	15363	15977	.	+	.	ID=gene-AC56_RS13740;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=AC56_RS13740;old_locus_tag=AC56_1817
NZ_JJLS01000172.1	Protein Homology	CDS	15363	15977	.	+	0	ID=cds-WP_000148710.1;Parent=gene-AC56_RS13740;Dbxref=GenBank:WP_000148710.1;Name=WP_000148710.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707489.2;locus_tag=AC56_RS13740;product=Tat proofreading chaperone DmsD;protein_id=WP_000148710.1;transl_table=11
NZ_JJLS01000172.1	RefSeq	gene	16136	17434	.	+	.	ID=gene-AC56_RS13735;Name=clcB;gbkey=Gene;gene=clcB;gene_biotype=protein_coding;locus_tag=AC56_RS13735;old_locus_tag=AC56_1818
NZ_JJLS01000172.1	Protein Homology	CDS	16136	17434	.	+	0	ID=cds-WP_071998953.1;Parent=gene-AC56_RS13735;Dbxref=GenBank:WP_071998953.1;Name=WP_071998953.1;Ontology_term=GO:0006821,GO:0010447,GO:0005247,GO:0016020;gbkey=CDS;gene=clcB;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,response to acidic pH|0010447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001296088.1;locus_tag=AC56_RS13735;product=voltage-gated ClC-type chloride channel ClcB;protein_id=WP_071998953.1;transl_table=11
NZ_JJLS01000172.1	RefSeq	gene	17387	18082	.	-	.	ID=gene-AC56_RS13730;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=AC56_RS13730;old_locus_tag=AC56_1819
NZ_JJLS01000172.1	Protein Homology	CDS	17387	18082	.	-	0	ID=cds-WP_000919231.1;Parent=gene-AC56_RS13730;Dbxref=GenBank:WP_000919231.1;Name=WP_000919231.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310326.2;locus_tag=AC56_RS13730;product=dethiobiotin synthase;protein_id=WP_000919231.1;transl_table=11
NZ_JJLS01000172.1	RefSeq	gene	18207	19427	.	-	.	ID=gene-AC56_RS13725;Name=mlc;gbkey=Gene;gene=mlc;gene_biotype=protein_coding;gene_synonym=dgsA;locus_tag=AC56_RS13725;old_locus_tag=AC56_1820
NZ_JJLS01000172.1	Protein Homology	CDS	18207	19427	.	-	0	ID=cds-WP_000225262.1;Parent=gene-AC56_RS13725;Dbxref=GenBank:WP_000225262.1;Name=WP_000225262.1;Ontology_term=GO:0006355,GO:0003677,GO:0046872;gbkey=CDS;gene=mlc;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416111.1;locus_tag=AC56_RS13725;product=sugar metabolism global transcriptional regulator Mlc;protein_id=WP_000225262.1;transl_table=11
NZ_JJLS01000172.1	RefSeq	gene	19562	20455	.	-	.	ID=gene-AC56_RS13720;Name=ynfL;gbkey=Gene;gene=ynfL;gene_biotype=protein_coding;locus_tag=AC56_RS13720;old_locus_tag=AC56_1821
NZ_JJLS01000172.1	Protein Homology	CDS	19562	20455	.	-	0	ID=cds-WP_001019525.1;Parent=gene-AC56_RS13720;Dbxref=GenBank:WP_001019525.1;Name=WP_001019525.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=ynfL;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416112.1;locus_tag=AC56_RS13720;product=LysR family transcriptional regulator;protein_id=WP_001019525.1;transl_table=11
NZ_JJLS01000172.1	RefSeq	gene	20562	21815	.	+	.	ID=gene-AC56_RS13715;Name=ynfM;gbkey=Gene;gene=ynfM;gene_biotype=protein_coding;locus_tag=AC56_RS13715;old_locus_tag=AC56_1822
NZ_JJLS01000172.1	Protein Homology	CDS	20562	21815	.	+	0	ID=cds-WP_032278317.1;Parent=gene-AC56_RS13715;Dbxref=GenBank:WP_032278317.1;Name=WP_032278317.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;gene=ynfM;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416113.1;locus_tag=AC56_RS13715;product=MFS transporter;protein_id=WP_032278317.1;transl_table=11
NZ_JJLS01000172.1	RefSeq	gene	21864	21983	.	-	.	ID=gene-AC56_RS33925;Name=AC56_RS33925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33925;old_locus_tag=AC56_1823
NZ_JJLS01000172.1	Protein Homology	CDS	21864	21983	.	-	0	ID=cds-WP_001299090.1;Parent=gene-AC56_RS33925;Dbxref=GenBank:WP_001299090.1;Name=WP_001299090.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033695.1;locus_tag=AC56_RS33925;product=KPN_01571 family protein;protein_id=WP_001299090.1;transl_table=11
NZ_JJLS01000172.1	RefSeq	gene	22239	22547	.	+	.	ID=gene-AC56_RS13710;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=AC56_RS13710;old_locus_tag=AC56_1824
NZ_JJLS01000172.1	Protein Homology	CDS	22239	22547	.	+	0	ID=cds-WP_001340364.1;Parent=gene-AC56_RS13710;Dbxref=GenBank:WP_001340364.1;Name=WP_001340364.1;gbkey=CDS;gene=asr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416114.2;locus_tag=AC56_RS13710;product=acid resistance repetitive basic protein Asr;protein_id=WP_001340364.1;transl_table=11
NZ_JJLS01000172.1	RefSeq	gene	22640	22723	.	+	.	ID=gene-AC56_RS0126010;Name=AC56_RS0126010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0126010
NZ_JJLS01000172.1	Protein Homology	CDS	22640	22723	.	+	0	ID=cds-WP_000233090.1;Parent=gene-AC56_RS0126010;Dbxref=GenBank:WP_000233090.1;Name=WP_000233090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165320.1;locus_tag=AC56_RS0126010;product=hypothetical protein;protein_id=WP_000233090.1;transl_table=11
NZ_JJLS01000172.1	RefSeq	gene	22823	23644	.	+	.	ID=gene-AC56_RS13705;Name=ydgD;gbkey=Gene;gene=ydgD;gene_biotype=protein_coding;locus_tag=AC56_RS13705;old_locus_tag=AC56_1825
NZ_JJLS01000172.1	Protein Homology	CDS	22823	23644	.	+	0	ID=cds-WP_001260865.1;Parent=gene-AC56_RS13705;Dbxref=GenBank:WP_001260865.1;Name=WP_001260865.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;gene=ydgD;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416115.1;locus_tag=AC56_RS13705;product=trypsin-like serine peptidase;protein_id=WP_001260865.1;transl_table=11
NZ_JJLS01000172.1	RefSeq	gene	23683	24012	.	-	.	ID=gene-AC56_RS13700;Name=mdtI;gbkey=Gene;gene=mdtI;gene_biotype=protein_coding;locus_tag=AC56_RS13700;old_locus_tag=AC56_1826
NZ_JJLS01000172.1	Protein Homology	CDS	23683	24012	.	-	0	ID=cds-WP_000046661.1;Parent=gene-AC56_RS13700;Dbxref=GenBank:WP_000046661.1;Name=WP_000046661.1;gbkey=CDS;gene=mdtI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310332.1;locus_tag=AC56_RS13700;product=multidrug/spermidine efflux SMR transporter subunit MdtI;protein_id=WP_000046661.1;transl_table=11
NZ_JJLS01000172.1	RefSeq	gene	23999	24364	.	-	.	ID=gene-AC56_RS13695;Name=mdtJ;gbkey=Gene;gene=mdtJ;gene_biotype=protein_coding;locus_tag=AC56_RS13695;old_locus_tag=AC56_1827
NZ_JJLS01000172.1	Protein Homology	CDS	23999	24364	.	-	0	ID=cds-WP_000276149.1;Parent=gene-AC56_RS13695;Dbxref=GenBank:WP_000276149.1;Name=WP_000276149.1;Ontology_term=GO:0015848,GO:0015606,GO:0016020;gbkey=CDS;gene=mdtJ;go_component=membrane|0016020||IEA;go_function=spermidine transmembrane transporter activity|0015606||IEA;go_process=spermidine transport|0015848||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310333.1;locus_tag=AC56_RS13695;product=multidrug/spermidine efflux SMR transporter subunit MdtJ;protein_id=WP_000276149.1;transl_table=11
NZ_JJLS01000172.1	RefSeq	gene	24471	24641	.	-	.	ID=gene-AC56_RS33930;Name=AC56_RS33930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33930
NZ_JJLS01000172.1	Protein Homology	CDS	24471	24641	.	-	0	ID=cds-WP_001303517.1;Parent=gene-AC56_RS33930;Dbxref=GenBank:WP_001303517.1;Name=WP_001303517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001334396.1;locus_tag=AC56_RS33930;product=hypothetical protein;protein_id=WP_001303517.1;transl_table=11
NZ_JJLS01000172.1	RefSeq	gene	24776	25810	.	+	.	ID=gene-AC56_RS13690;Name=tqsA;gbkey=Gene;gene=tqsA;gene_biotype=protein_coding;locus_tag=AC56_RS13690;old_locus_tag=AC56_1828
NZ_JJLS01000172.1	Protein Homology	CDS	24776	25810	.	+	0	ID=cds-WP_001118241.1;Parent=gene-AC56_RS13690;Dbxref=GenBank:WP_001118241.1;Name=WP_001118241.1;gbkey=CDS;gene=tqsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416118.1;locus_tag=AC56_RS13690;product=AI-2 transporter TqsA;protein_id=WP_001118241.1;transl_table=11
NZ_JJLS01000172.1	RefSeq	gene	25834	27222	.	-	.	ID=gene-AC56_RS13685;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=AC56_RS13685;old_locus_tag=AC56_1829
NZ_JJLS01000172.1	Protein Homology	CDS	25834	27222	.	-	0	ID=cds-WP_000014036.1;Parent=gene-AC56_RS13685;Dbxref=GenBank:WP_000014036.1;Name=WP_000014036.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014033.1;locus_tag=AC56_RS13685;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WP_000014036.1;transl_table=11
NZ_JJLS01000172.1	RefSeq	gene	27233	28765	.	-	.	ID=gene-AC56_RS13680;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=AC56_RS13680;old_locus_tag=AC56_1830
NZ_JJLS01000172.1	Protein Homology	CDS	27233	28765	.	-	0	ID=cds-WP_001300486.1;Parent=gene-AC56_RS13680;Dbxref=GenBank:WP_001300486.1;Name=WP_001300486.1;Ontology_term=GO:1902600,GO:0008750;gbkey=CDS;gene=pntA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416120.1;locus_tag=AC56_RS13680;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_001300486.1;transl_table=11
NZ_JJLS01000172.1	RefSeq	gene	29289	30233	.	+	.	ID=gene-AC56_RS13675;Name=ydgH;gbkey=Gene;gene=ydgH;gene_biotype=protein_coding;locus_tag=AC56_RS13675;old_locus_tag=AC56_1831
NZ_JJLS01000172.1	Protein Homology	CDS	29289	30233	.	+	0	ID=cds-WP_000769321.1;Parent=gene-AC56_RS13675;Dbxref=GenBank:WP_000769321.1;Name=WP_000769321.1;gbkey=CDS;gene=ydgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310337.1;locus_tag=AC56_RS13675;product=DUF1471 family protein YdgH;protein_id=WP_000769321.1;transl_table=11
NZ_JJLS01000172.1	RefSeq	gene	30419	31801	.	+	.	ID=gene-AC56_RS13670;Name=ydgI;gbkey=Gene;gene=ydgI;gene_biotype=protein_coding;locus_tag=AC56_RS13670;old_locus_tag=AC56_1832
NZ_JJLS01000172.1	Protein Homology	CDS	30419	31801	.	+	0	ID=cds-WP_032278318.1;Parent=gene-AC56_RS13670;Dbxref=GenBank:WP_032278318.1;Name=WP_032278318.1;gbkey=CDS;gene=ydgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416122.1;locus_tag=AC56_RS13670;product=amino acid permease;protein_id=WP_032278318.1;transl_table=11
NZ_JJLS01000172.1	RefSeq	gene	31838	32560	.	+	.	ID=gene-AC56_RS13665;Name=folM;gbkey=Gene;gene=folM;gene_biotype=protein_coding;locus_tag=AC56_RS13665;old_locus_tag=AC56_1833
NZ_JJLS01000172.1	Protein Homology	CDS	31838	32560	.	+	0	ID=cds-WP_000513678.1;Parent=gene-AC56_RS13665;Dbxref=GenBank:WP_000513678.1;Name=WP_000513678.1;Ontology_term=GO:0016491;gbkey=CDS;gene=folM;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310339.1;locus_tag=AC56_RS13665;product=dihydromonapterin reductase;protein_id=WP_000513678.1;transl_table=11
NZ_JJLS01000172.1	RefSeq	gene	32557	32892	.	-	.	ID=gene-AC56_RS13660;Name=ydgC;gbkey=Gene;gene=ydgC;gene_biotype=protein_coding;locus_tag=AC56_RS13660;old_locus_tag=AC56_1834
NZ_JJLS01000172.1	Protein Homology	CDS	32557	32892	.	-	0	ID=cds-WP_032278319.1;Parent=gene-AC56_RS13660;Dbxref=GenBank:WP_032278319.1;Name=WP_032278319.1;gbkey=CDS;gene=ydgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310340.1;locus_tag=AC56_RS13660;product=GlpM family protein;protein_id=WP_032278319.1;transl_table=11
NZ_JJLS01000172.1	RefSeq	gene	33021	33740	.	+	.	ID=gene-AC56_RS13655;Name=rstA;gbkey=Gene;gene=rstA;gene_biotype=protein_coding;locus_tag=AC56_RS13655;old_locus_tag=AC56_1835
NZ_JJLS01000172.1	Protein Homology	CDS	33021	33740	.	+	0	ID=cds-WP_032278320.1;Parent=gene-AC56_RS13655;Dbxref=GenBank:WP_032278320.1;Name=WP_032278320.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=rstA;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416125.2;locus_tag=AC56_RS13655;product=two-component system response regulator RstA;protein_id=WP_032278320.1;transl_table=11
NZ_JJLS01000172.1	RefSeq	gene	33744	35045	.	+	.	ID=gene-AC56_RS13650;Name=rstB;gbkey=Gene;gene=rstB;gene_biotype=protein_coding;locus_tag=AC56_RS13650;old_locus_tag=AC56_1836
NZ_JJLS01000172.1	Protein Homology	CDS	33744	35045	.	+	0	ID=cds-WP_000732491.1;Parent=gene-AC56_RS13650;Dbxref=GenBank:WP_000732491.1;Name=WP_000732491.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=rstB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310342.2;locus_tag=AC56_RS13650;product=two-component system sensor histidine kinase RstB;protein_id=WP_000732491.1;transl_table=11
NZ_JJLS01000172.1	RefSeq	gene	35121	36050	.	+	.	ID=gene-AC56_RS13645;Name=tus;gbkey=Gene;gene=tus;gene_biotype=protein_coding;locus_tag=AC56_RS13645;old_locus_tag=AC56_1837
NZ_JJLS01000172.1	Protein Homology	CDS	35121	36050	.	+	0	ID=cds-WP_001532798.1;Parent=gene-AC56_RS13645;Dbxref=GenBank:WP_001532798.1;Name=WP_001532798.1;Ontology_term=GO:0006274,GO:0003677,GO:0005737;gbkey=CDS;gene=tus;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707509.2;locus_tag=AC56_RS13645;product=DNA replication terminus site-binding protein;protein_id=WP_001532798.1;transl_table=11
NZ_JJLS01000172.1	RefSeq	gene	36047	37450	.	-	.	ID=gene-AC56_RS13640;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=AC56_RS13640;old_locus_tag=AC56_1838
NZ_JJLS01000172.1	Protein Homology	CDS	36047	37450	.	-	0	ID=cds-WP_001099108.1;Parent=gene-AC56_RS13640;Dbxref=GenBank:WP_001099108.1;Name=WP_001099108.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310344.1;locus_tag=AC56_RS13640;product=class II fumarate hydratase;protein_id=WP_001099108.1;transl_table=11
NZ_JJLS01000172.1	RefSeq	gene	37593	39239	.	-	.	ID=gene-AC56_RS13635;Name=fumB;gbkey=Gene;gene=fumB;gene_biotype=protein_coding;locus_tag=AC56_RS13635;old_locus_tag=AC56_1839
NZ_JJLS01000172.1	Protein Homology	CDS	37593	39239	.	-	0	ID=cds-WP_000066628.1;Parent=gene-AC56_RS13635;Dbxref=GenBank:WP_000066628.1;Name=WP_000066628.1;gbkey=CDS;gene=fumB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066594.1;locus_tag=AC56_RS13635;product=class I fumarate hydratase;protein_id=WP_000066628.1;transl_table=11
NZ_JJLS01000172.1	RefSeq	gene	39438	40613	.	+	.	ID=gene-AC56_RS13630;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=AC56_RS13630;old_locus_tag=AC56_1840
NZ_JJLS01000172.1	Protein Homology	CDS	39438	40613	.	+	0	ID=cds-WP_001170683.1;Parent=gene-AC56_RS13630;Dbxref=GenBank:WP_001170683.1;Name=WP_001170683.1;Ontology_term=GO:0009298,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=GDP-mannose biosynthetic process|0009298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416130.3;locus_tag=AC56_RS13630;product=mannose-6-phosphate isomerase;protein_id=WP_001170683.1;transl_table=11
NZ_JJLS01000172.1	RefSeq	gene	40714	42222	.	+	.	ID=gene-AC56_RS13625;Name=ydgA;gbkey=Gene;gene=ydgA;gene_biotype=protein_coding;locus_tag=AC56_RS13625;old_locus_tag=AC56_1841
NZ_JJLS01000172.1	Protein Homology	CDS	40714	42222	.	+	0	ID=cds-WP_001043342.1;Parent=gene-AC56_RS13625;Dbxref=GenBank:WP_001043342.1;Name=WP_001043342.1;gbkey=CDS;gene=ydgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310347.1;locus_tag=AC56_RS13625;product=YdgA family protein;protein_id=WP_001043342.1;transl_table=11
NZ_JJLS01000172.1	RefSeq	pseudogene	42267	43061	.	-	.	ID=gene-AC56_RS0126015;Name=uidC;end_range=43061,.;gbkey=Gene;gene=uidC;gene_biotype=pseudogene;locus_tag=AC56_RS0126015;old_locus_tag=AC56_1842;partial=true;pseudo=true
NZ_JJLS01000172.1	Protein Homology	CDS	42267	43061	.	-	0	ID=cds-AC56_RS0126015;Parent=gene-AC56_RS0126015;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=43061,.;gbkey=CDS;gene=uidC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416132.2;locus_tag=AC56_RS0126015;partial=true;product=glucuronide uptake porin UidC;pseudo=true;transl_table=11
NZ_JJLS01000172.1	RefSeq	gene	43127	43505	.	+	.	ID=gene-AC56_RS13620;Name=AC56_RS13620;end_range=43505,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS13620;old_locus_tag=AC56_1843;partial=true
NZ_JJLS01000172.1	Protein Homology	CDS	43127	43505	.	+	0	ID=cds-WP_032282690.1;Parent=gene-AC56_RS13620;Dbxref=GenBank:WP_032282690.1;Name=WP_032282690.1;end_range=43505,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS13620;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032282690.1;transl_table=11
##sequence-region NZ_JJLS01000173.1 1 2047
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000173.1	RefSeq	region	1	2047	.	+	.	ID=NZ_JJLS01000173.1:1..2047;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000173.1	RefSeq	gene	1	1708	.	+	.	ID=gene-AC56_RS13615;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=AC56_RS13615;old_locus_tag=AC56_1844;partial=true;start_range=.,1
NZ_JJLS01000173.1	Protein Homology	CDS	1	1708	.	+	1	ID=cds-WP_032278322.1;Parent=gene-AC56_RS13615;Dbxref=GenBank:WP_032278322.1;Name=WP_032278322.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003915525.1;locus_tag=AC56_RS13615;partial=true;product=electron transport complex subunit RsxC;protein_id=WP_032278322.1;start_range=.,1;transl_table=11
NZ_JJLS01000173.1	RefSeq	gene	1709	2047	.	+	.	ID=gene-AC56_RS13610;Name=AC56_RS13610;end_range=2047,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS13610;old_locus_tag=AC56_1845;partial=true
NZ_JJLS01000173.1	Protein Homology	CDS	1709	2047	.	+	0	ID=cds-WP_032198337.1;Parent=gene-AC56_RS13610;Dbxref=GenBank:WP_032198337.1;Name=WP_032198337.1;Ontology_term=GO:0055085,GO:0016020;end_range=2047,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310366.1;locus_tag=AC56_RS13610;partial=true;product=RnfABCDGE type electron transport complex subunit D;protein_id=WP_032198337.1;transl_table=11
##sequence-region NZ_JJLS01000174.1 1 48943
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000174.1	RefSeq	region	1	48943	.	+	.	ID=NZ_JJLS01000174.1:1..48943;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000174.1	RefSeq	gene	1	380	.	+	.	ID=gene-AC56_RS0126020;Name=AC56_RS0126020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0126020;old_locus_tag=AC56_1846;partial=true;start_range=.,1
NZ_JJLS01000174.1	Protein Homology	CDS	1	380	.	+	2	ID=cds-WP_032278348.1;Parent=gene-AC56_RS0126020;Dbxref=GenBank:WP_032278348.1;Name=WP_032278348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019370.1;locus_tag=AC56_RS0126020;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032278348.1;start_range=.,1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	362	580	.	+	.	ID=gene-AC56_RS33735;Name=AC56_RS33735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33735
NZ_JJLS01000174.1	Protein Homology	CDS	362	580	.	+	0	ID=cds-WP_148724946.1;Parent=gene-AC56_RS33735;Dbxref=GenBank:WP_148724946.1;Name=WP_148724946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001340384.1;locus_tag=AC56_RS33735;product=hypothetical protein;protein_id=WP_148724946.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	481	1761	.	-	.	ID=gene-AC56_RS13605;Name=uidB;gbkey=Gene;gene=uidB;gene_biotype=protein_coding;locus_tag=AC56_RS13605;old_locus_tag=AC56_1847
NZ_JJLS01000174.1	Protein Homology	CDS	481	1761	.	-	0	ID=cds-WP_032277716.1;Parent=gene-AC56_RS13605;Dbxref=GenBank:WP_032277716.1;Name=WP_032277716.1;Ontology_term=GO:0006810,GO:0022857,GO:0016020;gbkey=CDS;gene=uidB;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001703856.1;locus_tag=AC56_RS13605;product=glucuronide transporter;protein_id=WP_032277716.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	1758	3569	.	-	.	ID=gene-AC56_RS13600;Name=uidA;gbkey=Gene;gene=uidA;gene_biotype=protein_coding;locus_tag=AC56_RS13600;old_locus_tag=AC56_1848
NZ_JJLS01000174.1	Protein Homology	CDS	1758	3569	.	-	0	ID=cds-WP_032277715.1;Parent=gene-AC56_RS13600;Dbxref=GenBank:WP_032277715.1;Name=WP_032277715.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=uidA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416134.1;locus_tag=AC56_RS13600;product=beta-glucuronidase;protein_id=WP_032277715.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	3960	4550	.	-	.	ID=gene-AC56_RS13595;Name=uidR;gbkey=Gene;gene=uidR;gene_biotype=protein_coding;locus_tag=AC56_RS13595;old_locus_tag=AC56_1849
NZ_JJLS01000174.1	Protein Homology	CDS	3960	4550	.	-	0	ID=cds-WP_000969092.1;Parent=gene-AC56_RS13595;Dbxref=GenBank:WP_000969092.1;Name=WP_000969092.1;gbkey=CDS;gene=uidR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310353.1;locus_tag=AC56_RS13595;product=DNA-binding transcriptional regulator UidR;protein_id=WP_000969092.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	4779	5546	.	-	.	ID=gene-AC56_RS13590;Name=hdhA;gbkey=Gene;gene=hdhA;gene_biotype=protein_coding;locus_tag=AC56_RS13590;old_locus_tag=AC56_1850
NZ_JJLS01000174.1	Protein Homology	CDS	4779	5546	.	-	0	ID=cds-WP_000483362.1;Parent=gene-AC56_RS13590;Dbxref=GenBank:WP_000483362.1;Name=WP_000483362.1;gbkey=CDS;gene=hdhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310354.1;locus_tag=AC56_RS13590;product=7-alpha-hydroxysteroid dehydrogenase;protein_id=WP_000483362.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	5658	6686	.	-	.	ID=gene-AC56_RS13585;Name=malI;gbkey=Gene;gene=malI;gene_biotype=protein_coding;locus_tag=AC56_RS13585;old_locus_tag=AC56_1851
NZ_JJLS01000174.1	Protein Homology	CDS	5658	6686	.	-	0	ID=cds-WP_000179510.1;Parent=gene-AC56_RS13585;Dbxref=GenBank:WP_000179510.1;Name=WP_000179510.1;gbkey=CDS;gene=malI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416137.1;locus_tag=AC56_RS13585;product=mal regulon transcriptional regulator MalI;protein_id=WP_000179510.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	6861	8453	.	+	.	ID=gene-AC56_RS13580;Name=malX;gbkey=Gene;gene=malX;gene_biotype=protein_coding;locus_tag=AC56_RS13580;old_locus_tag=AC56_1852
NZ_JJLS01000174.1	Protein Homology	CDS	6861	8453	.	+	0	ID=cds-WP_032277714.1;Parent=gene-AC56_RS13580;Dbxref=GenBank:WP_032277714.1;Name=WP_032277714.1;gbkey=CDS;gene=malX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416138.1;locus_tag=AC56_RS13580;product=PTS maltose transporter subunit IICB;protein_id=WP_032277714.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	8463	9635	.	+	.	ID=gene-AC56_RS13575;Name=malY;gbkey=Gene;gene=malY;gene_biotype=protein_coding;locus_tag=AC56_RS13575;old_locus_tag=AC56_1853
NZ_JJLS01000174.1	Protein Homology	CDS	8463	9635	.	+	0	ID=cds-WP_000459379.1;Parent=gene-AC56_RS13575;Dbxref=GenBank:WP_000459379.1;Name=WP_000459379.1;gbkey=CDS;gene=malY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416139.1;locus_tag=AC56_RS13575;product=bifunctional maltose regulon transcriptional repressor/cystathionine beta-lyase MalY;protein_id=WP_000459379.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	9739	10740	.	+	.	ID=gene-AC56_RS13570;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=AC56_RS13570;old_locus_tag=AC56_1854
NZ_JJLS01000174.1	Protein Homology	CDS	9739	10740	.	+	0	ID=cds-WP_032277713.1;Parent=gene-AC56_RS13570;Dbxref=GenBank:WP_032277713.1;Name=WP_032277713.1;Ontology_term=GO:0009168,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine ribonucleoside monophosphate biosynthetic process|0009168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416140.1;locus_tag=AC56_RS13570;product=adenosine deaminase;protein_id=WP_032277713.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	10774	11814	.	-	.	ID=gene-AC56_RS13565;Name=ydgJ;gbkey=Gene;gene=ydgJ;gene_biotype=protein_coding;locus_tag=AC56_RS13565;old_locus_tag=AC56_1855
NZ_JJLS01000174.1	Protein Homology	CDS	10774	11814	.	-	0	ID=cds-WP_032277712.1;Parent=gene-AC56_RS13565;Dbxref=GenBank:WP_032277712.1;Name=WP_032277712.1;gbkey=CDS;gene=ydgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310359.2;locus_tag=AC56_RS13565;product=oxidoreductase;protein_id=WP_032277712.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	12057	12182	.	+	.	ID=gene-AC56_RS0126025;Name=blr;gbkey=Gene;gene=blr;gene_biotype=protein_coding;locus_tag=AC56_RS0126025
NZ_JJLS01000174.1	Protein Homology	CDS	12057	12182	.	+	0	ID=cds-WP_001300888.1;Parent=gene-AC56_RS0126025;Dbxref=GenBank:WP_001300888.1;Name=WP_001300888.1;gbkey=CDS;gene=blr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025303.1;locus_tag=AC56_RS0126025;product=division septum protein Blr;protein_id=WP_001300888.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	12455	12670	.	+	.	ID=gene-AC56_RS13560;Name=ydgT;gbkey=Gene;gene=ydgT;gene_biotype=protein_coding;locus_tag=AC56_RS13560;old_locus_tag=AC56_1856
NZ_JJLS01000174.1	Protein Homology	CDS	12455	12670	.	+	0	ID=cds-WP_000217950.1;Parent=gene-AC56_RS13560;Dbxref=GenBank:WP_000217950.1;Name=WP_000217950.1;gbkey=CDS;gene=ydgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310361.1;locus_tag=AC56_RS13560;product=transcription modulator YdgT;protein_id=WP_000217950.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	12756	13196	.	+	.	ID=gene-AC56_RS13555;Name=ydgK;gbkey=Gene;gene=ydgK;gene_biotype=protein_coding;locus_tag=AC56_RS13555;old_locus_tag=AC56_1857
NZ_JJLS01000174.1	Protein Homology	CDS	12756	13196	.	+	0	ID=cds-WP_000214176.1;Parent=gene-AC56_RS13555;Dbxref=GenBank:WP_000214176.1;Name=WP_000214176.1;gbkey=CDS;gene=ydgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707526.2;locus_tag=AC56_RS13555;product=DUF2569 domain-containing protein;protein_id=WP_000214176.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	13273	13854	.	+	.	ID=gene-AC56_RS13550;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=AC56_RS13550;old_locus_tag=AC56_1858
NZ_JJLS01000174.1	Protein Homology	CDS	13273	13854	.	+	0	ID=cds-WP_000133193.1;Parent=gene-AC56_RS13550;Dbxref=GenBank:WP_000133193.1;Name=WP_000133193.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456621.1;locus_tag=AC56_RS13550;product=electron transport complex subunit RsxA;protein_id=WP_000133193.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	13854	14432	.	+	.	ID=gene-AC56_RS13545;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=AC56_RS13545;old_locus_tag=AC56_1859
NZ_JJLS01000174.1	Protein Homology	CDS	13854	14432	.	+	0	ID=cds-WP_000991805.1;Parent=gene-AC56_RS13545;Dbxref=GenBank:WP_000991805.1;Name=WP_000991805.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416145.1;locus_tag=AC56_RS13545;product=electron transport complex subunit RsxB;protein_id=WP_000991805.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	14425	16551	.	+	.	ID=gene-AC56_RS13540;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=AC56_RS13540;old_locus_tag=AC56_1860
NZ_JJLS01000174.1	Protein Homology	CDS	14425	16551	.	+	0	ID=cds-WP_032277710.1;Parent=gene-AC56_RS13540;Dbxref=GenBank:WP_032277710.1;Name=WP_032277710.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416146.1;locus_tag=AC56_RS13540;product=electron transport complex subunit RsxC;protein_id=WP_032277710.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	16552	17610	.	+	.	ID=gene-AC56_RS13535;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=AC56_RS13535;old_locus_tag=AC56_1861
NZ_JJLS01000174.1	Protein Homology	CDS	16552	17610	.	+	0	ID=cds-WP_000231927.1;Parent=gene-AC56_RS13535;Dbxref=GenBank:WP_000231927.1;Name=WP_000231927.1;Ontology_term=GO:0022900,GO:0055085,GO:0016020;gbkey=CDS;gene=rsxD;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416147.1;locus_tag=AC56_RS13535;product=electron transport complex subunit RsxD;protein_id=WP_000231927.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	17614	18234	.	+	.	ID=gene-AC56_RS13530;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=AC56_RS13530;old_locus_tag=AC56_1862
NZ_JJLS01000174.1	Protein Homology	CDS	17614	18234	.	+	0	ID=cds-WP_000920784.1;Parent=gene-AC56_RS13530;Dbxref=GenBank:WP_000920784.1;Name=WP_000920784.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0016020;gbkey=CDS;gene=rsxG;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416148.1;locus_tag=AC56_RS13530;product=electron transport complex subunit RsxG;protein_id=WP_000920784.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	18238	18933	.	+	.	ID=gene-AC56_RS13525;Name=rsxE;gbkey=Gene;gene=rsxE;gene_biotype=protein_coding;locus_tag=AC56_RS13525;old_locus_tag=AC56_1863
NZ_JJLS01000174.1	Protein Homology	CDS	18238	18933	.	+	0	ID=cds-WP_001289661.1;Parent=gene-AC56_RS13525;Dbxref=GenBank:WP_001289661.1;Name=WP_001289661.1;gbkey=CDS;gene=rsxE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416149.1;locus_tag=AC56_RS13525;product=electron transport complex subunit RsxE;protein_id=WP_001289661.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	18933	19568	.	+	.	ID=gene-AC56_RS13520;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=AC56_RS13520;old_locus_tag=AC56_1864
NZ_JJLS01000174.1	Protein Homology	CDS	18933	19568	.	+	0	ID=cds-WP_001030339.1;Parent=gene-AC56_RS13520;Dbxref=GenBank:WP_001030339.1;Name=WP_001030339.1;Ontology_term=GO:0006284,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416150.1;locus_tag=AC56_RS13520;product=endonuclease III;protein_id=WP_001030339.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	20179	21681	.	+	.	ID=gene-AC56_RS13510;Name=dtpA;gbkey=Gene;gene=dtpA;gene_biotype=protein_coding;locus_tag=AC56_RS13510;old_locus_tag=AC56_1866
NZ_JJLS01000174.1	Protein Homology	CDS	20179	21681	.	+	0	ID=cds-WP_000100932.1;Parent=gene-AC56_RS13510;Dbxref=GenBank:WP_000100932.1;Name=WP_000100932.1;Ontology_term=GO:0015833,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpA;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416151.1;locus_tag=AC56_RS13510;product=dipeptide/tripeptide permease DtpA;protein_id=WP_000100932.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	21787	22392	.	+	.	ID=gene-AC56_RS13505;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;locus_tag=AC56_RS13505;old_locus_tag=AC56_1867
NZ_JJLS01000174.1	Protein Homology	CDS	21787	22392	.	+	0	ID=cds-WP_000765749.1;Parent=gene-AC56_RS13505;Dbxref=GenBank:WP_000765749.1;Name=WP_000765749.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=gstA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310371.1;locus_tag=AC56_RS13505;product=glutathione transferase GstA;protein_id=WP_000765749.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	22436	23299	.	-	.	ID=gene-AC56_RS13500;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=AC56_RS13500;old_locus_tag=AC56_1868
NZ_JJLS01000174.1	Protein Homology	CDS	22436	23299	.	-	0	ID=cds-WP_001307229.1;Parent=gene-AC56_RS13500;Dbxref=GenBank:WP_001307229.1;Name=WP_001307229.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416153.1;locus_tag=AC56_RS13500;product=pyridoxal kinase;protein_id=WP_001307229.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	23358	24632	.	-	.	ID=gene-AC56_RS13495;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=AC56_RS13495;old_locus_tag=AC56_1869
NZ_JJLS01000174.1	Protein Homology	CDS	23358	24632	.	-	0	ID=cds-WP_001295400.1;Parent=gene-AC56_RS13495;Dbxref=GenBank:WP_001295400.1;Name=WP_001295400.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310373.1;locus_tag=AC56_RS13495;product=tyrosine--tRNA ligase;protein_id=WP_001295400.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	24761	25417	.	-	.	ID=gene-AC56_RS13490;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=AC56_RS13490;old_locus_tag=AC56_1870
NZ_JJLS01000174.1	Protein Homology	CDS	24761	25417	.	-	0	ID=cds-WP_001282319.1;Parent=gene-AC56_RS13490;Dbxref=GenBank:WP_001282319.1;Name=WP_001282319.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127173.1;locus_tag=AC56_RS13490;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_001282319.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	25476	25805	.	-	.	ID=gene-AC56_RS13485;Name=mliC;gbkey=Gene;gene=mliC;gene_biotype=protein_coding;locus_tag=AC56_RS13485;old_locus_tag=AC56_1871
NZ_JJLS01000174.1	Protein Homology	CDS	25476	25805	.	-	0	ID=cds-WP_000178042.1;Parent=gene-AC56_RS13485;Dbxref=GenBank:WP_000178042.1;Name=WP_000178042.1;gbkey=CDS;gene=mliC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416156.4;locus_tag=AC56_RS13485;product=C-type lysozyme inhibitor;protein_id=WP_000178042.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	25903	27012	.	-	.	ID=gene-AC56_RS13480;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;locus_tag=AC56_RS13480;old_locus_tag=AC56_1872
NZ_JJLS01000174.1	Protein Homology	CDS	25903	27012	.	-	0	ID=cds-WP_000835077.1;Parent=gene-AC56_RS13480;Dbxref=GenBank:WP_000835077.1;Name=WP_000835077.1;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416157.1;locus_tag=AC56_RS13480;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_000835077.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	27286	27753	.	+	.	ID=gene-AC56_RS13475;Name=slyB;gbkey=Gene;gene=slyB;gene_biotype=protein_coding;locus_tag=AC56_RS13475;old_locus_tag=AC56_1874
NZ_JJLS01000174.1	Protein Homology	CDS	27286	27753	.	+	0	ID=cds-WP_000597196.1;Parent=gene-AC56_RS13475;Dbxref=GenBank:WP_000597196.1;Name=WP_000597196.1;gbkey=CDS;gene=slyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310377.1;locus_tag=AC56_RS13475;product=outer membrane lipoprotein SlyB;protein_id=WP_000597196.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	27800	28234	.	-	.	ID=gene-AC56_RS13470;Name=slyA;gbkey=Gene;gene=slyA;gene_biotype=protein_coding;locus_tag=AC56_RS13470;old_locus_tag=AC56_1875
NZ_JJLS01000174.1	Protein Homology	CDS	27800	28234	.	-	0	ID=cds-WP_001296943.1;Parent=gene-AC56_RS13470;Dbxref=GenBank:WP_001296943.1;Name=WP_001296943.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=slyA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416159.2;locus_tag=AC56_RS13470;product=transcriptional regulator SlyA;protein_id=WP_001296943.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	28435	28671	.	+	.	ID=gene-AC56_RS13465;Name=ydhI;gbkey=Gene;gene=ydhI;gene_biotype=protein_coding;locus_tag=AC56_RS13465;old_locus_tag=AC56_1876
NZ_JJLS01000174.1	Protein Homology	CDS	28435	28671	.	+	0	ID=cds-WP_000670998.1;Parent=gene-AC56_RS13465;Dbxref=GenBank:WP_000670998.1;Name=WP_000670998.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ydhI;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310379.1;locus_tag=AC56_RS13465;product=DUF1656 domain-containing protein;protein_id=WP_000670998.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	28674	29528	.	+	.	ID=gene-AC56_RS13460;Name=ydhJ;gbkey=Gene;gene=ydhJ;gene_biotype=protein_coding;locus_tag=AC56_RS13460;old_locus_tag=AC56_1877
NZ_JJLS01000174.1	Protein Homology	CDS	28674	29528	.	+	0	ID=cds-WP_032278325.1;Parent=gene-AC56_RS13460;Dbxref=GenBank:WP_032278325.1;Name=WP_032278325.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;gene=ydhJ;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416161.4;locus_tag=AC56_RS13460;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_032278325.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	29528	31540	.	+	.	ID=gene-AC56_RS13455;Name=ydhK;gbkey=Gene;gene=ydhK;gene_biotype=protein_coding;locus_tag=AC56_RS13455;old_locus_tag=AC56_1878
NZ_JJLS01000174.1	Protein Homology	CDS	29528	31540	.	+	0	ID=cds-WP_032278326.1;Parent=gene-AC56_RS13455;Dbxref=GenBank:WP_032278326.1;Name=WP_032278326.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;gene=ydhK;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416162.1;locus_tag=AC56_RS13455;product=FUSC family protein;protein_id=WP_032278326.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	31541	32062	.	-	.	ID=gene-AC56_RS13450;Name=sodC;gbkey=Gene;gene=sodC;gene_biotype=protein_coding;locus_tag=AC56_RS13450;old_locus_tag=AC56_1879
NZ_JJLS01000174.1	Protein Homology	CDS	31541	32062	.	-	0	ID=cds-WP_001296937.1;Parent=gene-AC56_RS13450;Dbxref=GenBank:WP_001296937.1;Name=WP_001296937.1;Ontology_term=GO:0004784;gbkey=CDS;gene=sodC;go_function=superoxide dismutase activity|0004784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310382.1;locus_tag=AC56_RS13450;product=superoxide dismutase [Cu-Zn] SodC;protein_id=WP_001296937.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	32143	33039	.	-	.	ID=gene-AC56_RS13445;Name=ydhF;gbkey=Gene;gene=ydhF;gene_biotype=protein_coding;locus_tag=AC56_RS13445;old_locus_tag=AC56_1880
NZ_JJLS01000174.1	Protein Homology	CDS	32143	33039	.	-	0	ID=cds-WP_000250656.1;Parent=gene-AC56_RS13445;Dbxref=GenBank:WP_000250656.1;Name=WP_000250656.1;Ontology_term=GO:0016491,GO:0050661;gbkey=CDS;gene=ydhF;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025305.1;locus_tag=AC56_RS13445;product=aldo/keto reductase;protein_id=WP_000250656.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	33088	33327	.	-	.	ID=gene-AC56_RS0126030;Name=ydhL;gbkey=Gene;gene=ydhL;gene_biotype=protein_coding;locus_tag=AC56_RS0126030
NZ_JJLS01000174.1	Protein Homology	CDS	33088	33327	.	-	0	ID=cds-WP_000840481.1;Parent=gene-AC56_RS0126030;Dbxref=GenBank:WP_000840481.1;Name=WP_000840481.1;gbkey=CDS;gene=ydhL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416165.2;locus_tag=AC56_RS0126030;product=DUF1289 domain-containing protein;protein_id=WP_000840481.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	33430	34029	.	+	.	ID=gene-AC56_RS13440;Name=nemR;gbkey=Gene;gene=nemR;gene_biotype=protein_coding;locus_tag=AC56_RS13440;old_locus_tag=AC56_1882
NZ_JJLS01000174.1	Protein Homology	CDS	33430	34029	.	+	0	ID=cds-WP_032278328.1;Parent=gene-AC56_RS13440;Dbxref=GenBank:WP_032278328.1;Name=WP_032278328.1;gbkey=CDS;gene=nemR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416166.3;locus_tag=AC56_RS13440;product=DNA-binding transcriptional regulator NemR;protein_id=WP_032278328.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	34066	35163	.	+	.	ID=gene-AC56_RS13435;Name=nemA;gbkey=Gene;gene=nemA;gene_biotype=protein_coding;locus_tag=AC56_RS13435;old_locus_tag=AC56_1883
NZ_JJLS01000174.1	Protein Homology	CDS	34066	35163	.	+	0	ID=cds-WP_000093589.1;Parent=gene-AC56_RS13435;Dbxref=GenBank:WP_000093589.1;Name=WP_000093589.1;gbkey=CDS;gene=nemA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416167.1;locus_tag=AC56_RS13435;product=N-ethylmaleimide reductase;protein_id=WP_000093589.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	35244	35651	.	+	.	ID=gene-AC56_RS13430;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=AC56_RS13430;old_locus_tag=AC56_1884
NZ_JJLS01000174.1	Protein Homology	CDS	35244	35651	.	+	0	ID=cds-WP_001237796.1;Parent=gene-AC56_RS13430;Dbxref=GenBank:WP_001237796.1;Name=WP_001237796.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500591.1;locus_tag=AC56_RS13430;product=lactoylglutathione lyase;protein_id=WP_001237796.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	35754	36401	.	+	.	ID=gene-AC56_RS13425;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=AC56_RS13425;old_locus_tag=AC56_1885
NZ_JJLS01000174.1	Protein Homology	CDS	35754	36401	.	+	0	ID=cds-WP_001282281.1;Parent=gene-AC56_RS13425;Dbxref=GenBank:WP_001282281.1;Name=WP_001282281.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=RNA exonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310388.1;locus_tag=AC56_RS13425;product=ribonuclease T;protein_id=WP_001282281.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	pseudogene	36494	41108	.	+	.	ID=gene-AC56_RS0126035;Name=lhr;gbkey=Gene;gene=lhr;gene_biotype=pseudogene;locus_tag=AC56_RS0126035;pseudo=true
NZ_JJLS01000174.1	Protein Homology	CDS	36494	41108	.	+	0	ID=cds-AC56_RS0126035;Parent=gene-AC56_RS0126035;Note=frameshifted;Ontology_term=GO:0003676,GO:0005524,GO:0016818;gbkey=CDS;gene=lhr;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416170.1;locus_tag=AC56_RS0126035;product=ATP-dependent helicase;pseudo=true;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	41159	41506	.	-	.	ID=gene-AC56_RS13420;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=AC56_RS13420;old_locus_tag=AC56_1888
NZ_JJLS01000174.1	Protein Homology	CDS	41159	41506	.	-	0	ID=cds-WP_000108172.1;Parent=gene-AC56_RS13420;Dbxref=GenBank:WP_000108172.1;Name=WP_000108172.1;gbkey=CDS;gene=grxD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310390.1;locus_tag=AC56_RS13420;product=monothiol glutaredoxin 4;protein_id=WP_000108172.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	41840	42655	.	+	.	ID=gene-AC56_RS13415;Name=mepH;gbkey=Gene;gene=mepH;gene_biotype=protein_coding;locus_tag=AC56_RS13415;old_locus_tag=AC56_1890
NZ_JJLS01000174.1	Protein Homology	CDS	41840	42655	.	+	0	ID=cds-WP_000101193.1;Parent=gene-AC56_RS13415;Dbxref=GenBank:WP_000101193.1;Name=WP_000101193.1;gbkey=CDS;gene=mepH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416172.1;locus_tag=AC56_RS13415;product=peptidoglycan DD-endopeptidase MepH;protein_id=WP_000101193.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	42783	43364	.	+	.	ID=gene-AC56_RS13410;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=AC56_RS13410;old_locus_tag=AC56_1891
NZ_JJLS01000174.1	Protein Homology	CDS	42783	43364	.	+	0	ID=cds-WP_000007283.1;Parent=gene-AC56_RS13410;Dbxref=GenBank:WP_000007283.1;Name=WP_000007283.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;gene=sodB;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310392.1;locus_tag=AC56_RS13410;product=superoxide dismutase [Fe];protein_id=WP_000007283.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	43599	44768	.	-	.	ID=gene-AC56_RS13405;Name=ydhP;gbkey=Gene;gene=ydhP;gene_biotype=protein_coding;locus_tag=AC56_RS13405;old_locus_tag=AC56_1892
NZ_JJLS01000174.1	Protein Homology	CDS	43599	44768	.	-	0	ID=cds-WP_000701040.1;Parent=gene-AC56_RS13405;Dbxref=GenBank:WP_000701040.1;Name=WP_000701040.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;gene=ydhP;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416174.1;locus_tag=AC56_RS13405;product=MFS transporter;protein_id=WP_000701040.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	44934	45023	.	-	.	ID=gene-AC56_RS0126040;Name=cydH;gbkey=Gene;gene=cydH;gene_biotype=protein_coding;gene_synonym=ynhF;locus_tag=AC56_RS0126040;old_locus_tag=AC56_1893
NZ_JJLS01000174.1	Protein Homology	CDS	44934	45023	.	-	0	ID=cds-WP_000102278.1;Parent=gene-AC56_RS0126040;Dbxref=GenBank:WP_000102278.1;Name=WP_000102278.1;gbkey=CDS;gene=cydH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165321.1;locus_tag=AC56_RS0126040;product=cytochrome bd-I accessory subunit CydH;protein_id=WP_000102278.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	45322	46347	.	+	.	ID=gene-AC56_RS13400;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=AC56_RS13400;old_locus_tag=AC56_1894
NZ_JJLS01000174.1	Protein Homology	CDS	45322	46347	.	+	0	ID=cds-WP_000190982.1;Parent=gene-AC56_RS13400;Dbxref=GenBank:WP_000190982.1;Name=WP_000190982.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127190.1;locus_tag=AC56_RS13400;product=HTH-type transcriptional repressor PurR;protein_id=WP_000190982.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	46344	47276	.	-	.	ID=gene-AC56_RS13395;Name=punR;gbkey=Gene;gene=punR;gene_biotype=protein_coding;locus_tag=AC56_RS13395;old_locus_tag=AC56_1895
NZ_JJLS01000174.1	Protein Homology	CDS	46344	47276	.	-	0	ID=cds-WP_001405254.1;Parent=gene-AC56_RS13395;Dbxref=GenBank:WP_001405254.1;Name=WP_001405254.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=punR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310395.1;locus_tag=AC56_RS13395;product=DNA-binding transcriptional activator PunR;protein_id=WP_001405254.1;transl_table=11
NZ_JJLS01000174.1	RefSeq	gene	47389	48600	.	+	.	ID=gene-AC56_RS13390;Name=punC;gbkey=Gene;gene=punC;gene_biotype=protein_coding;gene_synonym=ydhC;locus_tag=AC56_RS13390;old_locus_tag=AC56_1896
NZ_JJLS01000174.1	Protein Homology	CDS	47389	48600	.	+	0	ID=cds-WP_001182363.1-3;Parent=gene-AC56_RS13390;Dbxref=GenBank:WP_001182363.1;Name=WP_001182363.1;Ontology_term=GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310396.1;locus_tag=AC56_RS13390;product=purine nucleoside transporter PunC;protein_id=WP_001182363.1;transl_table=11
##sequence-region NZ_JJLS01000175.1 1 24242
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000175.1	RefSeq	region	1	24242	.	+	.	ID=NZ_JJLS01000175.1:1..24242;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000175.1	RefSeq	pseudogene	1	485	.	-	.	ID=gene-AC56_RS13385;Name=AC56_RS13385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS13385;old_locus_tag=AC56_1897;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000175.1	Protein Homology	CDS	1	485	.	-	0	ID=cds-AC56_RS13385;Parent=gene-AC56_RS13385;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS13385;partial=true;product=IS5-like element ISKpn26 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000175.1	RefSeq	pseudogene	554	1690	.	+	.	ID=gene-AC56_RS13380;Name=AC56_RS13380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS13380;old_locus_tag=AC56_1898;partial=true;pseudo=true;start_range=.,554
NZ_JJLS01000175.1	Protein Homology	CDS	554	1690	.	+	0	ID=cds-AC56_RS13380;Parent=gene-AC56_RS13380;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416183.1;locus_tag=AC56_RS13380;partial=true;product=FAD-NAD(P)-binding protein;pseudo=true;start_range=.,554;transl_table=11
NZ_JJLS01000175.1	RefSeq	gene	1702	2514	.	-	.	ID=gene-AC56_RS13375;Name=ydhT;gbkey=Gene;gene=ydhT;gene_biotype=protein_coding;locus_tag=AC56_RS13375;old_locus_tag=AC56_1899
NZ_JJLS01000175.1	Protein Homology	CDS	1702	2514	.	-	0	ID=cds-WP_032278330.1;Parent=gene-AC56_RS13375;Dbxref=GenBank:WP_032278330.1;Name=WP_032278330.1;gbkey=CDS;gene=ydhT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416184.1;locus_tag=AC56_RS13375;product=protein YdhT;protein_id=WP_032278330.1;transl_table=11
NZ_JJLS01000175.1	RefSeq	gene	2518	3303	.	-	.	ID=gene-AC56_RS13370;Name=phsC;gbkey=Gene;gene=phsC;gene_biotype=protein_coding;locus_tag=AC56_RS13370;old_locus_tag=AC56_1900
NZ_JJLS01000175.1	Protein Homology	CDS	2518	3303	.	-	0	ID=cds-WP_001069977.1;Parent=gene-AC56_RS13370;Dbxref=GenBank:WP_001069977.1;Name=WP_001069977.1;gbkey=CDS;gene=phsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416185.1;locus_tag=AC56_RS13370;product=thiosulfate reductase cytochrome B subunit;protein_id=WP_001069977.1;transl_table=11
NZ_JJLS01000175.1	RefSeq	gene	3300	3968	.	-	.	ID=gene-AC56_RS13365;Name=ydhX;gbkey=Gene;gene=ydhX;gene_biotype=protein_coding;locus_tag=AC56_RS13365;old_locus_tag=AC56_1901
NZ_JJLS01000175.1	Protein Homology	CDS	3300	3968	.	-	0	ID=cds-WP_050439685.1;Parent=gene-AC56_RS13365;Dbxref=GenBank:WP_050439685.1;Name=WP_050439685.1;gbkey=CDS;gene=ydhX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416186.4;locus_tag=AC56_RS13365;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_050439685.1;transl_table=11
NZ_JJLS01000175.1	RefSeq	gene	4032	4670	.	-	.	ID=gene-AC56_RS13360;Name=ydhW;gbkey=Gene;gene=ydhW;gene_biotype=protein_coding;locus_tag=AC56_RS13360;old_locus_tag=AC56_1902
NZ_JJLS01000175.1	Protein Homology	CDS	4032	4670	.	-	0	ID=cds-WP_001301419.1;Parent=gene-AC56_RS13360;Dbxref=GenBank:WP_001301419.1;Name=WP_001301419.1;gbkey=CDS;gene=ydhW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707570.2;locus_tag=AC56_RS13360;product=YdhW family putative oxidoreductase system protein;protein_id=WP_001301419.1;transl_table=11
NZ_JJLS01000175.1	RefSeq	gene	4683	6785	.	-	.	ID=gene-AC56_RS13355;Name=ydhV;gbkey=Gene;gene=ydhV;gene_biotype=protein_coding;locus_tag=AC56_RS13355;old_locus_tag=AC56_1903
NZ_JJLS01000175.1	Protein Homology	CDS	4683	6785	.	-	0	ID=cds-WP_001273527.1;Parent=gene-AC56_RS13355;Dbxref=GenBank:WP_001273527.1;Name=WP_001273527.1;Ontology_term=GO:0009055,GO:0016491,GO:0051536;gbkey=CDS;gene=ydhV;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416188.1;locus_tag=AC56_RS13355;product=aldehyde ferredoxin oxidoreductase;protein_id=WP_001273527.1;transl_table=11
NZ_JJLS01000175.1	RefSeq	gene	6806	7432	.	-	.	ID=gene-AC56_RS0126045;Name=ydhY;gbkey=Gene;gene=ydhY;gene_biotype=protein_coding;locus_tag=AC56_RS0126045;old_locus_tag=AC56_1904
NZ_JJLS01000175.1	Protein Homology	CDS	6806	7432	.	-	0	ID=cds-WP_001070230.1;Parent=gene-AC56_RS0126045;Dbxref=GenBank:WP_001070230.1;Name=WP_001070230.1;gbkey=CDS;gene=ydhY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310408.1;locus_tag=AC56_RS0126045;product=ferredoxin-like protein;protein_id=WP_001070230.1;transl_table=11
NZ_JJLS01000175.1	RefSeq	gene	7887	8096	.	-	.	ID=gene-AC56_RS13350;Name=fumD;gbkey=Gene;gene=fumD;gene_biotype=protein_coding;locus_tag=AC56_RS13350;old_locus_tag=AC56_1906
NZ_JJLS01000175.1	Protein Homology	CDS	7887	8096	.	-	0	ID=cds-WP_000528342.1;Parent=gene-AC56_RS13350;Dbxref=GenBank:WP_000528342.1;Name=WP_000528342.1;gbkey=CDS;gene=fumD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310409.1;locus_tag=AC56_RS13350;product=fumarate hydratase FumD;protein_id=WP_000528342.1;transl_table=11
NZ_JJLS01000175.1	RefSeq	gene	8451	8645	.	+	.	ID=gene-AC56_RS33315;Name=AC56_RS33315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33315
NZ_JJLS01000175.1	Protein Homology	CDS	8451	8645	.	+	0	ID=cds-WP_240806354.1;Parent=gene-AC56_RS33315;Dbxref=GenBank:WP_240806354.1;Name=WP_240806354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010283910.1;locus_tag=AC56_RS33315;product=protein YnhH;protein_id=WP_240806354.1;transl_table=11
NZ_JJLS01000175.1	RefSeq	gene	8653	10065	.	+	.	ID=gene-AC56_RS13345;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=protein_coding;locus_tag=AC56_RS13345;old_locus_tag=AC56_1907
NZ_JJLS01000175.1	Protein Homology	CDS	8653	10065	.	+	0	ID=cds-WP_001295403.1;Parent=gene-AC56_RS13345;Dbxref=GenBank:WP_001295403.1;Name=WP_001295403.1;Ontology_term=GO:0006096,GO:0004743;gbkey=CDS;gene=pykF;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=AC56_RS13345;product=pyruvate kinase PykF;protein_id=WP_001295403.1;transl_table=11
NZ_JJLS01000175.1	RefSeq	gene	10376	10612	.	+	.	ID=gene-AC56_RS13340;Name=lpp;gbkey=Gene;gene=lpp;gene_biotype=protein_coding;locus_tag=AC56_RS13340;old_locus_tag=AC56_1908
NZ_JJLS01000175.1	Protein Homology	CDS	10376	10612	.	+	0	ID=cds-WP_000648420.1;Parent=gene-AC56_RS13340;Dbxref=GenBank:WP_000648420.1;Name=WP_000648420.1;gbkey=CDS;gene=lpp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310411.1;locus_tag=AC56_RS13340;product=murein lipoprotein Lpp;protein_id=WP_000648420.1;transl_table=11
NZ_JJLS01000175.1	RefSeq	gene	10676	11680	.	-	.	ID=gene-AC56_RS13335;Name=ldtE;gbkey=Gene;gene=ldtE;gene_biotype=protein_coding;locus_tag=AC56_RS13335;old_locus_tag=AC56_1909
NZ_JJLS01000175.1	Protein Homology	CDS	10676	11680	.	-	0	ID=cds-WP_000817105.1;Parent=gene-AC56_RS13335;Dbxref=GenBank:WP_000817105.1;Name=WP_000817105.1;Ontology_term=GO:0009252,GO:0018104,GO:0016757,GO:0071972;gbkey=CDS;gene=ldtE;go_function=glycosyltransferase activity|0016757||IEA,peptidoglycan L%2CD-transpeptidase activity|0071972||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,peptidoglycan-protein cross-linking|0018104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416193.1;locus_tag=AC56_RS13335;product=L%2CD-transpeptidase LdtE;protein_id=WP_000817105.1;transl_table=11
NZ_JJLS01000175.1	RefSeq	gene	11829	12245	.	-	.	ID=gene-AC56_RS13330;Name=sufE;gbkey=Gene;gene=sufE;gene_biotype=protein_coding;locus_tag=AC56_RS13330;old_locus_tag=AC56_1910
NZ_JJLS01000175.1	Protein Homology	CDS	11829	12245	.	-	0	ID=cds-WP_001196530.1;Parent=gene-AC56_RS13330;Dbxref=GenBank:WP_001196530.1;Name=WP_001196530.1;gbkey=CDS;gene=sufE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416194.1;locus_tag=AC56_RS13330;product=cysteine desulfuration protein SufE;protein_id=WP_001196530.1;transl_table=11
NZ_JJLS01000175.1	RefSeq	gene	12258	13478	.	-	.	ID=gene-AC56_RS13325;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=AC56_RS13325;old_locus_tag=AC56_1911
NZ_JJLS01000175.1	Protein Homology	CDS	12258	13478	.	-	0	ID=cds-WP_000144539.1;Parent=gene-AC56_RS13325;Dbxref=GenBank:WP_000144539.1;Name=WP_000144539.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;gene=sufS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310414.1;locus_tag=AC56_RS13325;product=cysteine desulfurase SufS;protein_id=WP_000144539.1;transl_table=11
NZ_JJLS01000175.1	RefSeq	gene	13475	14746	.	-	.	ID=gene-AC56_RS13320;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=AC56_RS13320;old_locus_tag=AC56_1912
NZ_JJLS01000175.1	Protein Homology	CDS	13475	14746	.	-	0	ID=cds-WP_000907948.1;Parent=gene-AC56_RS13320;Dbxref=GenBank:WP_000907948.1;Name=WP_000907948.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707580.1;locus_tag=AC56_RS13320;product=Fe-S cluster assembly protein SufD;protein_id=WP_000907948.1;transl_table=11
NZ_JJLS01000175.1	RefSeq	gene	14721	15467	.	-	.	ID=gene-AC56_RS13315;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=AC56_RS13315;old_locus_tag=AC56_1913
NZ_JJLS01000175.1	Protein Homology	CDS	14721	15467	.	-	0	ID=cds-WP_032278333.1;Parent=gene-AC56_RS13315;Dbxref=GenBank:WP_032278333.1;Name=WP_032278333.1;Ontology_term=GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500629.1;locus_tag=AC56_RS13315;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_032278333.1;transl_table=11
NZ_JJLS01000175.1	RefSeq	gene	15477	16964	.	-	.	ID=gene-AC56_RS13310;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=AC56_RS13310;old_locus_tag=AC56_1914
NZ_JJLS01000175.1	Protein Homology	CDS	15477	16964	.	-	0	ID=cds-WP_032278334.1;Parent=gene-AC56_RS13310;Dbxref=GenBank:WP_032278334.1;Name=WP_032278334.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416198.2;locus_tag=AC56_RS13310;product=Fe-S cluster assembly protein SufB;protein_id=WP_032278334.1;transl_table=11
NZ_JJLS01000175.1	RefSeq	gene	16973	17341	.	-	.	ID=gene-AC56_RS13305;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=AC56_RS13305;old_locus_tag=AC56_1915
NZ_JJLS01000175.1	Protein Homology	CDS	16973	17341	.	-	0	ID=cds-WP_000367160.1;Parent=gene-AC56_RS13305;Dbxref=GenBank:WP_000367160.1;Name=WP_000367160.1;gbkey=CDS;gene=sufA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416199.1;locus_tag=AC56_RS13305;product=Fe-S cluster assembly scaffold SufA;protein_id=WP_000367160.1;transl_table=11
NZ_JJLS01000175.1	RefSeq	pseudogene	17889	18054	.	-	.	ID=gene-AC56_RS0126050;Name=AC56_RS0126050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0126050;old_locus_tag=AC56_1916;pseudo=true
NZ_JJLS01000175.1	Protein Homology	CDS	17889	18054	.	-	0	ID=cds-AC56_RS0126050;Parent=gene-AC56_RS0126050;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416200.2;locus_tag=AC56_RS0126050;product=YdiH family protein;pseudo=true;transl_table=11
NZ_JJLS01000175.1	RefSeq	gene	18154	18564	.	-	.	ID=gene-AC56_RS13300;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=AC56_RS13300;old_locus_tag=AC56_1917
NZ_JJLS01000175.1	Protein Homology	CDS	18154	18564	.	-	0	ID=cds-WP_000637982.1;Parent=gene-AC56_RS13300;Dbxref=GenBank:WP_000637982.1;Name=WP_000637982.1;gbkey=CDS;gene=menI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416201.1;locus_tag=AC56_RS13300;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase;protein_id=WP_000637982.1;transl_table=11
NZ_JJLS01000175.1	RefSeq	gene	18561	21617	.	-	.	ID=gene-AC56_RS13295;Name=ydiJ;gbkey=Gene;gene=ydiJ;gene_biotype=protein_coding;locus_tag=AC56_RS13295;old_locus_tag=AC56_1918
NZ_JJLS01000175.1	Protein Homology	CDS	18561	21617	.	-	0	ID=cds-WP_032278335.1;Parent=gene-AC56_RS13295;Dbxref=GenBank:WP_032278335.1;Name=WP_032278335.1;Ontology_term=GO:1903457,GO:0008720,GO:0046872;gbkey=CDS;gene=ydiJ;go_function=D-lactate dehydrogenase activity|0008720||IEA,metal ion binding|0046872||IEA;go_process=lactate catabolic process|1903457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416202.1;locus_tag=AC56_RS13295;product=D-2-hydroxyglutarate dehydrogenase YdiJ;protein_id=WP_032278335.1;transl_table=11
NZ_JJLS01000175.1	RefSeq	gene	21831	22943	.	+	.	ID=gene-AC56_RS13290;Name=ydiK;gbkey=Gene;gene=ydiK;gene_biotype=protein_coding;locus_tag=AC56_RS13290;old_locus_tag=AC56_1919
NZ_JJLS01000175.1	Protein Homology	CDS	21831	22943	.	+	0	ID=cds-WP_000248636.1;Parent=gene-AC56_RS13290;Dbxref=GenBank:WP_000248636.1;Name=WP_000248636.1;gbkey=CDS;gene=ydiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416203.1;locus_tag=AC56_RS13290;product=AI-2E family transporter YdiK;protein_id=WP_000248636.1;transl_table=11
NZ_JJLS01000175.1	RefSeq	gene	23129	23236	.	+	.	ID=gene-AC56_RS27930;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=antisense_RNA;locus_tag=AC56_RS27930
NZ_JJLS01000175.1	cmsearch	antisense_RNA	23129	23236	.	+	.	ID=rna-AC56_RS27930;Parent=gene-AC56_RS27930;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS27930;product=antisense sRNA RprA
NZ_JJLS01000175.1	cmsearch	exon	23129	23236	.	+	.	ID=exon-AC56_RS27930-1;Parent=rna-AC56_RS27930;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS27930;product=antisense sRNA RprA
NZ_JJLS01000175.1	RefSeq	gene	23372	23728	.	+	.	ID=gene-AC56_RS13285;Name=ydiL;gbkey=Gene;gene=ydiL;gene_biotype=protein_coding;locus_tag=AC56_RS13285;old_locus_tag=AC56_1920
NZ_JJLS01000175.1	Protein Homology	CDS	23372	23728	.	+	0	ID=cds-WP_016242171.1;Parent=gene-AC56_RS13285;Dbxref=GenBank:WP_016242171.1;Name=WP_016242171.1;gbkey=CDS;gene=ydiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707588.2;locus_tag=AC56_RS13285;product=YdiL family protein;protein_id=WP_016242171.1;transl_table=11
NZ_JJLS01000175.1	RefSeq	pseudogene	23839	24242	.	-	.	ID=gene-AC56_RS13280;Name=AC56_RS13280;end_range=24242,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS13280;old_locus_tag=AC56_1921;partial=true;pseudo=true
NZ_JJLS01000175.1	Protein Homology	CDS	23839	24242	.	-	2	ID=cds-AC56_RS13280;Parent=gene-AC56_RS13280;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=24242,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS13280;partial=true;product=IS5-like element IS903B family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000176.1 1 6084
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000176.1	RefSeq	region	1	6084	.	+	.	ID=NZ_JJLS01000176.1:1..6084;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000176.1	RefSeq	gene	1	415	.	-	.	ID=gene-AC56_RS13275;Name=AC56_RS13275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS13275;old_locus_tag=AC56_1922;partial=true;start_range=.,1
NZ_JJLS01000176.1	Protein Homology	CDS	1	415	.	-	0	ID=cds-WP_141012177.1;Parent=gene-AC56_RS13275;Dbxref=GenBank:WP_141012177.1;Name=WP_141012177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS13275;partial=true;product=transposase;protein_id=WP_141012177.1;start_range=.,1;transl_table=11
NZ_JJLS01000176.1	RefSeq	pseudogene	447	1013	.	+	.	ID=gene-AC56_RS0126055;Name=AC56_RS0126055;end_range=1013,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0126055;old_locus_tag=AC56_1923;partial=true;pseudo=true;start_range=.,447
NZ_JJLS01000176.1	Protein Homology	CDS	447	1013	.	+	0	ID=cds-AC56_RS0126055;Parent=gene-AC56_RS0126055;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0055085,GO:0022857;end_range=1013,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416205.1;locus_tag=AC56_RS0126055;partial=true;product=MFS transporter;pseudo=true;start_range=.,447;transl_table=11
NZ_JJLS01000176.1	RefSeq	gene	1022	1719	.	-	.	ID=gene-AC56_RS13270;Name=AC56_RS13270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS13270;old_locus_tag=AC56_1924
NZ_JJLS01000176.1	Protein Homology	CDS	1470	1719	.	-	0	ID=cds-WP_101780539.1;Parent=gene-AC56_RS13270;Dbxref=GenBank:WP_101780539.1;Name=WP_101780539.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=AC56_RS13270;product=IS1 family transposase;protein_id=WP_101780539.1;transl_table=11
NZ_JJLS01000176.1	Protein Homology	CDS	1022	1470	.	-	2	ID=cds-WP_101780539.1;Parent=gene-AC56_RS13270;Dbxref=GenBank:WP_101780539.1;Name=WP_101780539.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=AC56_RS13270;product=IS1 family transposase;protein_id=WP_101780539.1;transl_table=11
NZ_JJLS01000176.1	RefSeq	pseudogene	1775	2326	.	+	.	ID=gene-AC56_RS13265;Name=AC56_RS13265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS13265;old_locus_tag=AC56_1925;partial=true;pseudo=true;start_range=.,1775
NZ_JJLS01000176.1	Protein Homology	CDS	1775	2326	.	+	0	ID=cds-AC56_RS13265;Parent=gene-AC56_RS13265;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416205.1;locus_tag=AC56_RS13265;partial=true;product=MFS transporter;pseudo=true;start_range=.,1775;transl_table=11
NZ_JJLS01000176.1	RefSeq	gene	2553	3818	.	+	.	ID=gene-AC56_RS13260;Name=ydiN;gbkey=Gene;gene=ydiN;gene_biotype=protein_coding;locus_tag=AC56_RS13260;old_locus_tag=AC56_1926
NZ_JJLS01000176.1	Protein Homology	CDS	2553	3818	.	+	0	ID=cds-WP_001297389.1-3;Parent=gene-AC56_RS13260;Dbxref=GenBank:WP_001297389.1;Name=WP_001297389.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydiN;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310425.2;locus_tag=AC56_RS13260;product=MFS transporter;protein_id=WP_001297389.1;transl_table=11
NZ_JJLS01000176.1	RefSeq	gene	3830	4696	.	+	.	ID=gene-AC56_RS13255;Name=ydiB;gbkey=Gene;gene=ydiB;gene_biotype=protein_coding;locus_tag=AC56_RS13255;old_locus_tag=AC56_1927
NZ_JJLS01000176.1	Protein Homology	CDS	3830	4696	.	+	0	ID=cds-WP_032278339.1-3;Parent=gene-AC56_RS13255;Dbxref=GenBank:WP_032278339.1;Name=WP_032278339.1;gbkey=CDS;gene=ydiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416207.1;locus_tag=AC56_RS13255;product=quinate/shikimate dehydrogenase;protein_id=WP_032278339.1;transl_table=11
NZ_JJLS01000176.1	RefSeq	gene	4727	5485	.	+	.	ID=gene-AC56_RS13250;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=AC56_RS13250;old_locus_tag=AC56_1928
NZ_JJLS01000176.1	Protein Homology	CDS	4727	5485	.	+	0	ID=cds-WP_016242173.1-3;Parent=gene-AC56_RS13250;Dbxref=GenBank:WP_016242173.1;Name=WP_016242173.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416208.1;locus_tag=AC56_RS13250;product=type I 3-dehydroquinate dehydratase;protein_id=WP_016242173.1;transl_table=11
NZ_JJLS01000176.1	RefSeq	pseudogene	5628	5918	.	+	.	ID=gene-AC56_RS13245;Name=AC56_RS13245;end_range=5918,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS13245;old_locus_tag=AC56_1930;partial=true;pseudo=true
NZ_JJLS01000176.1	Protein Homology	CDS	5628	5918	.	+	0	ID=cds-AC56_RS13245;Parent=gene-AC56_RS13245;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0008410;end_range=5918,.;gbkey=CDS;go_function=CoA-transferase activity|0008410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310428.1;locus_tag=AC56_RS13245;partial=true;product=CoA-transferase;pseudo=true;transl_table=11
NZ_JJLS01000176.1	RefSeq	pseudogene	5950	6084	.	+	.	ID=gene-AC56_RS32750;Name=AC56_RS32750;end_range=6084,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS32750;old_locus_tag=AC56_1931;partial=true;pseudo=true
NZ_JJLS01000176.1	Protein Homology	CDS	5950	6084	.	+	0	ID=cds-AC56_RS32750;Parent=gene-AC56_RS32750;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=6084,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS32750;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000177.1 1 3904
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000177.1	RefSeq	region	1	3904	.	+	.	ID=NZ_JJLS01000177.1:1..3904;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000177.1	RefSeq	pseudogene	1	495	.	+	.	ID=gene-AC56_RS32145;Name=AC56_RS32145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS32145;old_locus_tag=AC56_1932;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000177.1	Protein Homology	CDS	1	495	.	+	0	ID=cds-AC56_RS32145;Parent=gene-AC56_RS32145;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS32145;partial=true;product=IS5-like element IS903 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000177.1	RefSeq	pseudogene	553	1590	.	+	.	ID=gene-AC56_RS0126060;Name=AC56_RS0126060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0126060;old_locus_tag=AC56_1933;partial=true;pseudo=true;start_range=.,553
NZ_JJLS01000177.1	Protein Homology	CDS	553	1590	.	+	0	ID=cds-AC56_RS0126060;Parent=gene-AC56_RS0126060;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008410;gbkey=CDS;go_function=CoA-transferase activity|0008410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310428.1;locus_tag=AC56_RS0126060;partial=true;product=CoA-transferase;pseudo=true;start_range=.,553;transl_table=11
NZ_JJLS01000177.1	RefSeq	gene	1604	2755	.	+	.	ID=gene-AC56_RS13235;Name=ydiO;gbkey=Gene;gene=ydiO;gene_biotype=protein_coding;locus_tag=AC56_RS13235;old_locus_tag=AC56_1934
NZ_JJLS01000177.1	Protein Homology	CDS	1604	2755	.	+	0	ID=cds-WP_000347850.1;Parent=gene-AC56_RS13235;Dbxref=GenBank:WP_000347850.1;Name=WP_000347850.1;gbkey=CDS;gene=ydiO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310429.2;locus_tag=AC56_RS13235;product=acyl-CoA dehydrogenase;protein_id=WP_000347850.1;transl_table=11
NZ_JJLS01000177.1	RefSeq	pseudogene	2798	3373	.	-	.	ID=gene-AC56_RS13230;Name=AC56_RS13230;end_range=3373,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS13230;old_locus_tag=AC56_1935;partial=true;pseudo=true
NZ_JJLS01000177.1	Protein Homology	CDS	2798	3373	.	-	0	ID=cds-AC56_RS13230;Parent=gene-AC56_RS13230;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006355,GO:0003700,GO:0043565;end_range=3373,.;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416211.1;locus_tag=AC56_RS13230;partial=true;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11
NZ_JJLS01000177.1	RefSeq	pseudogene	3385	3904	.	-	.	ID=gene-AC56_RS0126065;Name=AC56_RS0126065;end_range=3904,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0126065;partial=true;pseudo=true
NZ_JJLS01000177.1	Protein Homology	CDS	3385	3904	.	-	2	ID=cds-AC56_RS0126065;Parent=gene-AC56_RS0126065;Note=frameshifted%3B internal stop%3B incomplete%3B missing N-terminus;Ontology_term=GO:0004803;end_range=3904,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS0126065;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000178.1 1 1798
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000178.1	RefSeq	region	1	1798	.	+	.	ID=NZ_JJLS01000178.1:1..1798;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000178.1	RefSeq	gene	1	318	.	-	.	ID=gene-AC56_RS13225;Name=AC56_RS13225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS13225;old_locus_tag=AC56_1938;partial=true;start_range=.,1
NZ_JJLS01000178.1	Protein Homology	CDS	1	318	.	-	0	ID=cds-WP_001549863.1;Parent=gene-AC56_RS13225;Dbxref=GenBank:WP_001549863.1;Name=WP_001549863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS13225;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_001549863.1;start_range=.,1;transl_table=11
NZ_JJLS01000178.1	RefSeq	gene	961	1344	.	+	.	ID=gene-AC56_RS13220;Name=AC56_RS13220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS13220;old_locus_tag=AC56_1939
NZ_JJLS01000178.1	GeneMarkS-2+	CDS	961	1344	.	+	0	ID=cds-WP_248784831.1;Parent=gene-AC56_RS13220;Dbxref=GenBank:WP_248784831.1;Name=WP_248784831.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS13220;product=hypothetical protein;protein_id=WP_248784831.1;transl_table=11
NZ_JJLS01000178.1	RefSeq	gene	1338	1798	.	-	.	ID=gene-AC56_RS13215;Name=AC56_RS13215;end_range=1798,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS13215;old_locus_tag=AC56_1940;partial=true
NZ_JJLS01000178.1	Protein Homology	CDS	1338	1798	.	-	2	ID=cds-WP_032282705.1;Parent=gene-AC56_RS13215;Dbxref=GenBank:WP_032282705.1;Name=WP_032282705.1;Ontology_term=GO:0004803;end_range=1798,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=AC56_RS13215;partial=true;product=IS1 family transposase;protein_id=WP_032282705.1;transl_table=11
##sequence-region NZ_JJLS01000179.1 1 29384
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000179.1	RefSeq	region	1	29384	.	+	.	ID=NZ_JJLS01000179.1:1..29384;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000179.1	RefSeq	pseudogene	1	612	.	-	.	ID=gene-AC56_RS0126070;Name=AC56_RS0126070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0126070;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000179.1	Protein Homology	CDS	1	612	.	-	0	ID=cds-AC56_RS0126070;Parent=gene-AC56_RS0126070;Note=frameshifted%3B internal stop%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=AC56_RS0126070;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000179.1	RefSeq	pseudogene	668	1048	.	+	.	ID=gene-AC56_RS13210;Name=AC56_RS13210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS13210;old_locus_tag=AC56_1943;partial=true;pseudo=true;start_range=.,668
NZ_JJLS01000179.1	Protein Homology	CDS	668	1048	.	+	0	ID=cds-AC56_RS13210;Parent=gene-AC56_RS13210;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310435.2;locus_tag=AC56_RS13210;partial=true;product=AMP-binding enzyme;pseudo=true;start_range=.,668;transl_table=11
NZ_JJLS01000179.1	RefSeq	gene	1105	3483	.	-	.	ID=gene-AC56_RS13205;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=AC56_RS13205;old_locus_tag=AC56_1944
NZ_JJLS01000179.1	Protein Homology	CDS	1105	3483	.	-	0	ID=cds-WP_000069369.1;Parent=gene-AC56_RS13205;Dbxref=GenBank:WP_000069369.1;Name=WP_000069369.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416217.1;locus_tag=AC56_RS13205;product=phosphoenolpyruvate synthase;protein_id=WP_000069369.1;transl_table=11
NZ_JJLS01000179.1	RefSeq	gene	3816	4649	.	+	.	ID=gene-AC56_RS13200;Name=ppsR;gbkey=Gene;gene=ppsR;gene_biotype=protein_coding;locus_tag=AC56_RS13200;old_locus_tag=AC56_1945
NZ_JJLS01000179.1	Protein Homology	CDS	3816	4649	.	+	0	ID=cds-WP_000368046.1;Parent=gene-AC56_RS13200;Dbxref=GenBank:WP_000368046.1;Name=WP_000368046.1;Ontology_term=GO:0004674,GO:0005524,GO:0016776,GO:0043531;gbkey=CDS;gene=ppsR;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,ADP binding|0043531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310437.1;locus_tag=AC56_RS13200;product=posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR;protein_id=WP_000368046.1;transl_table=11
NZ_JJLS01000179.1	RefSeq	gene	4806	5852	.	+	.	ID=gene-AC56_RS13195;Name=aroH;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;locus_tag=AC56_RS13195;old_locus_tag=AC56_1946
NZ_JJLS01000179.1	Protein Homology	CDS	4806	5852	.	+	0	ID=cds-WP_001082226.1;Parent=gene-AC56_RS13195;Dbxref=GenBank:WP_001082226.1;Name=WP_001082226.1;gbkey=CDS;gene=aroH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310438.1;locus_tag=AC56_RS13195;product=3-deoxy-7-phosphoheptulonate synthase AroH;protein_id=WP_001082226.1;transl_table=11
NZ_JJLS01000179.1	RefSeq	gene	5984	6175	.	+	.	ID=gene-AC56_RS13190;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=AC56_RS13190;old_locus_tag=AC56_1947
NZ_JJLS01000179.1	Protein Homology	CDS	5984	6175	.	+	0	ID=cds-WP_001270810.1;Parent=gene-AC56_RS13190;Dbxref=GenBank:WP_001270810.1;Name=WP_001270810.1;gbkey=CDS;gene=hemP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310439.1;locus_tag=AC56_RS13190;product=hemin uptake protein HemP;protein_id=WP_001270810.1;transl_table=11
NZ_JJLS01000179.1	RefSeq	gene	6179	7615	.	-	.	ID=gene-AC56_RS13185;Name=selO;gbkey=Gene;gene=selO;gene_biotype=protein_coding;locus_tag=AC56_RS13185;old_locus_tag=AC56_1948
NZ_JJLS01000179.1	Protein Homology	CDS	6179	7615	.	-	0	ID=cds-WP_000175708.1;Parent=gene-AC56_RS13185;Dbxref=GenBank:WP_000175708.1;Name=WP_000175708.1;Ontology_term=GO:0018117,GO:0005524,GO:0070733;gbkey=CDS;gene=selO;go_function=ATP binding|0005524||IEA,AMPylase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416221.1;locus_tag=AC56_RS13185;product=protein adenylyltransferase SelO;protein_id=WP_000175708.1;transl_table=11
NZ_JJLS01000179.1	RefSeq	gene	7678	8391	.	-	.	ID=gene-AC56_RS13180;Name=ydiV;gbkey=Gene;gene=ydiV;gene_biotype=protein_coding;locus_tag=AC56_RS13180;old_locus_tag=AC56_1949
NZ_JJLS01000179.1	Protein Homology	CDS	7678	8391	.	-	0	ID=cds-WP_016242177.1;Parent=gene-AC56_RS13180;Dbxref=GenBank:WP_016242177.1;Name=WP_016242177.1;gbkey=CDS;gene=ydiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416222.1;locus_tag=AC56_RS13180;product=anti-FlhDC factor;protein_id=WP_016242177.1;transl_table=11
NZ_JJLS01000179.1	RefSeq	gene	8638	9102	.	-	.	ID=gene-AC56_RS13175;Name=nlpC;gbkey=Gene;gene=nlpC;gene_biotype=protein_coding;locus_tag=AC56_RS13175;old_locus_tag=AC56_1950
NZ_JJLS01000179.1	Protein Homology	CDS	8638	9102	.	-	0	ID=cds-WP_001209795.1;Parent=gene-AC56_RS13175;Dbxref=GenBank:WP_001209795.1;Name=WP_001209795.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;gene=nlpC;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416223.1;locus_tag=AC56_RS13175;product=C40 family peptidase;protein_id=WP_001209795.1;transl_table=11
NZ_JJLS01000179.1	RefSeq	gene	9180	9929	.	-	.	ID=gene-AC56_RS13170;Name=btuD;gbkey=Gene;gene=btuD;gene_biotype=protein_coding;locus_tag=AC56_RS13170;old_locus_tag=AC56_1951
NZ_JJLS01000179.1	Protein Homology	CDS	9180	9929	.	-	0	ID=cds-WP_000029466.1;Parent=gene-AC56_RS13170;Dbxref=GenBank:WP_000029466.1;Name=WP_000029466.1;Ontology_term=GO:0015889,GO:0005524;gbkey=CDS;gene=btuD;go_function=ATP binding|0005524||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707405.1;locus_tag=AC56_RS13170;product=vitamin B12 ABC transporter ATP-binding protein BtuD;protein_id=WP_000029466.1;transl_table=11
NZ_JJLS01000179.1	RefSeq	gene	9929	10480	.	-	.	ID=gene-AC56_RS13165;Name=btuE;gbkey=Gene;gene=btuE;gene_biotype=protein_coding;locus_tag=AC56_RS13165;old_locus_tag=AC56_1952
NZ_JJLS01000179.1	Protein Homology	CDS	9929	10480	.	-	0	ID=cds-WP_001154183.1;Parent=gene-AC56_RS13165;Dbxref=GenBank:WP_001154183.1;Name=WP_001154183.1;gbkey=CDS;gene=btuE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707404.1;locus_tag=AC56_RS13165;product=bifunctional thioredoxin/glutathione peroxidase;protein_id=WP_001154183.1;transl_table=11
NZ_JJLS01000179.1	RefSeq	gene	10543	11523	.	-	.	ID=gene-AC56_RS13160;Name=btuC;gbkey=Gene;gene=btuC;gene_biotype=protein_coding;locus_tag=AC56_RS13160;old_locus_tag=AC56_1953
NZ_JJLS01000179.1	Protein Homology	CDS	10543	11523	.	-	0	ID=cds-WP_032278345.1;Parent=gene-AC56_RS13160;Dbxref=GenBank:WP_032278345.1;Name=WP_032278345.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;gene=btuC;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416226.1;locus_tag=AC56_RS13160;product=vitamin B12 ABC transporter permease BtuC;protein_id=WP_032278345.1;transl_table=11
NZ_JJLS01000179.1	RefSeq	gene	11624	11923	.	-	.	ID=gene-AC56_RS13155;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=AC56_RS13155;old_locus_tag=AC56_1954
NZ_JJLS01000179.1	Protein Homology	CDS	11624	11923	.	-	0	ID=cds-WP_001229265.1;Parent=gene-AC56_RS13155;Dbxref=GenBank:WP_001229265.1;Name=WP_001229265.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677;gbkey=CDS;gene=ihfA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310446.1;locus_tag=AC56_RS13155;product=integration host factor subunit alpha;protein_id=WP_001229265.1;transl_table=11
NZ_JJLS01000179.1	RefSeq	gene	11928	14315	.	-	.	ID=gene-AC56_RS13150;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=AC56_RS13150;old_locus_tag=AC56_1955
NZ_JJLS01000179.1	Protein Homology	CDS	11928	14315	.	-	0	ID=cds-WP_000672380.1;Parent=gene-AC56_RS13150;Dbxref=GenBank:WP_000672380.1;Name=WP_000672380.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416228.1;locus_tag=AC56_RS13150;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_000672380.1;transl_table=11
NZ_JJLS01000179.1	RefSeq	gene	14330	15313	.	-	.	ID=gene-AC56_RS13145;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=AC56_RS13145;old_locus_tag=AC56_1956
NZ_JJLS01000179.1	Protein Homology	CDS	14330	15313	.	-	0	ID=cds-WP_000018596.1;Parent=gene-AC56_RS13145;Dbxref=GenBank:WP_000018596.1;Name=WP_000018596.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1;locus_tag=AC56_RS13145;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_000018596.1;transl_table=11
NZ_JJLS01000179.1	cmsearch	sequence_feature	15523	15647	.	-	.	ID=id-NZ_JJLS01000179.1:15523..15647;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5
NZ_JJLS01000179.1	RefSeq	gene	15597	15641	.	-	.	ID=gene-AC56_RS32150;Name=pheM;gbkey=Gene;gene=pheM;gene_biotype=protein_coding;locus_tag=AC56_RS32150
NZ_JJLS01000179.1	Protein Homology	CDS	15597	15641	.	-	0	ID=cds-WP_001386830.1;Parent=gene-AC56_RS32150;Dbxref=GenBank:WP_001386830.1;Name=WP_001386830.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheM;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310449.1;locus_tag=AC56_RS32150;product=pheST operon leader peptide PheM;protein_id=WP_001386830.1;transl_table=11
NZ_JJLS01000179.1	RefSeq	gene	15764	16120	.	-	.	ID=gene-AC56_RS13140;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=AC56_RS13140;old_locus_tag=AC56_1957
NZ_JJLS01000179.1	Protein Homology	CDS	15764	16120	.	-	0	ID=cds-WP_000124850.1;Parent=gene-AC56_RS13140;Dbxref=GenBank:WP_000124850.1;Name=WP_000124850.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310450.1;locus_tag=AC56_RS13140;product=50S ribosomal protein L20;protein_id=WP_000124850.1;transl_table=11
NZ_JJLS01000179.1	RefSeq	gene	16173	16370	.	-	.	ID=gene-AC56_RS13135;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=AC56_RS13135;old_locus_tag=AC56_1958
NZ_JJLS01000179.1	Protein Homology	CDS	16173	16370	.	-	0	ID=cds-WP_001124225.1;Parent=gene-AC56_RS13135;Dbxref=GenBank:WP_001124225.1;Name=WP_001124225.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=AC56_RS13135;product=50S ribosomal protein L35;protein_id=WP_001124225.1;transl_table=11
NZ_JJLS01000179.1	RefSeq	gene	16467	17009	.	-	.	ID=gene-AC56_RS0126090;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=AC56_RS0126090
NZ_JJLS01000179.1	Protein Homology	CDS	16467	17009	.	-	0	ID=cds-WP_001700733.1;Parent=gene-AC56_RS0126090;Dbxref=GenBank:WP_001700733.1;Name=WP_001700733.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310452.1;locus_tag=AC56_RS0126090;product=translation initiation factor IF-3;protein_id=WP_001700733.1;transl_table=11
NZ_JJLS01000179.1	RefSeq	gene	17013	18941	.	-	.	ID=gene-AC56_RS13130;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=AC56_RS13130;old_locus_tag=AC56_1960
NZ_JJLS01000179.1	Protein Homology	CDS	17013	18941	.	-	0	ID=cds-WP_032278346.1;Parent=gene-AC56_RS13130;Dbxref=GenBank:WP_032278346.1;Name=WP_032278346.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1;locus_tag=AC56_RS13130;product=threonine--tRNA ligase;protein_id=WP_032278346.1;transl_table=11
NZ_JJLS01000179.1	RefSeq	pseudogene	19465	21364	.	+	.	ID=gene-AC56_RS0126095;Name=espL1;gbkey=Gene;gene=espL1;gene_biotype=pseudogene;locus_tag=AC56_RS0126095;old_locus_tag=AC56_1962;pseudo=true
NZ_JJLS01000179.1	Protein Homology	CDS	19465	21364	.	+	0	ID=cds-AC56_RS0126095;Parent=gene-AC56_RS0126095;Note=frameshifted;gbkey=CDS;gene=espL1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310454.1;locus_tag=AC56_RS0126095;product=type III secretion system effector EspL1;pseudo=true;transl_table=11
NZ_JJLS01000179.1	RefSeq	gene	21535	21642	.	+	.	ID=gene-AC56_RS0126100;Name=yniD;gbkey=Gene;gene=yniD;gene_biotype=protein_coding;locus_tag=AC56_RS0126100;old_locus_tag=AC56_1963
NZ_JJLS01000179.1	Protein Homology	CDS	21535	21642	.	+	0	ID=cds-WP_001142445.1;Parent=gene-AC56_RS0126100;Dbxref=GenBank:WP_001142445.1;Name=WP_001142445.1;gbkey=CDS;gene=yniD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588455.2;locus_tag=AC56_RS0126100;product=small membrane protein YniD;protein_id=WP_001142445.1;transl_table=11
NZ_JJLS01000179.1	RefSeq	gene	21695	22453	.	-	.	ID=gene-AC56_RS13125;Name=ydiY;gbkey=Gene;gene=ydiY;gene_biotype=protein_coding;locus_tag=AC56_RS13125;old_locus_tag=AC56_1964
NZ_JJLS01000179.1	Protein Homology	CDS	21695	22453	.	-	0	ID=cds-WP_000771391.1;Parent=gene-AC56_RS13125;Dbxref=GenBank:WP_000771391.1;Name=WP_000771391.1;gbkey=CDS;gene=ydiY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416236.1;locus_tag=AC56_RS13125;product=DUF481 domain-containing protein;protein_id=WP_000771391.1;transl_table=11
NZ_JJLS01000179.1	RefSeq	gene	22740	23669	.	+	.	ID=gene-AC56_RS13120;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=AC56_RS13120;old_locus_tag=AC56_1965
NZ_JJLS01000179.1	Protein Homology	CDS	22740	23669	.	+	0	ID=cds-WP_000251727.1;Parent=gene-AC56_RS13120;Dbxref=GenBank:WP_000251727.1;Name=WP_000251727.1;Ontology_term=GO:0005975,GO:0016773;gbkey=CDS;gene=pfkB;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416237.3;locus_tag=AC56_RS13120;product=6-phosphofructokinase II;protein_id=WP_000251727.1;transl_table=11
NZ_JJLS01000179.1	RefSeq	gene	23770	24060	.	+	.	ID=gene-AC56_RS13115;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;locus_tag=AC56_RS13115;old_locus_tag=AC56_1966
NZ_JJLS01000179.1	Protein Homology	CDS	23770	24060	.	+	0	ID=cds-WP_000146159.1;Parent=gene-AC56_RS13115;Dbxref=GenBank:WP_000146159.1;Name=WP_000146159.1;Ontology_term=GO:0004521;gbkey=CDS;gene=ghoS;go_function=RNA endonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310457.1;locus_tag=AC56_RS13115;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=WP_000146159.1;transl_table=11
NZ_JJLS01000179.1	RefSeq	gene	24166	25026	.	+	.	ID=gene-AC56_RS13110;Name=yniA;gbkey=Gene;gene=yniA;gene_biotype=protein_coding;locus_tag=AC56_RS13110;old_locus_tag=AC56_1967
NZ_JJLS01000179.1	Protein Homology	CDS	24166	25026	.	+	0	ID=cds-WP_000267650.1;Parent=gene-AC56_RS13110;Dbxref=GenBank:WP_000267650.1;Name=WP_000267650.1;gbkey=CDS;gene=yniA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416239.1;locus_tag=AC56_RS13110;product=fructosamine kinase family protein;protein_id=WP_000267650.1;transl_table=11
NZ_JJLS01000179.1	RefSeq	gene	25067	25603	.	-	.	ID=gene-AC56_RS13105;Name=yniB;gbkey=Gene;gene=yniB;gene_biotype=protein_coding;locus_tag=AC56_RS13105;old_locus_tag=AC56_1968
NZ_JJLS01000179.1	Protein Homology	CDS	25067	25603	.	-	0	ID=cds-WP_000222172.1;Parent=gene-AC56_RS13105;Dbxref=GenBank:WP_000222172.1;Name=WP_000222172.1;gbkey=CDS;gene=yniB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416240.1;locus_tag=AC56_RS13105;product=YniB family protein;protein_id=WP_000222172.1;transl_table=11
NZ_JJLS01000179.1	RefSeq	gene	25750	26418	.	+	.	ID=gene-AC56_RS13100;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=protein_coding;locus_tag=AC56_RS13100;old_locus_tag=AC56_1969
NZ_JJLS01000179.1	Protein Homology	CDS	25750	26418	.	+	0	ID=cds-WP_032278347.1;Parent=gene-AC56_RS13100;Dbxref=GenBank:WP_032278347.1;Name=WP_032278347.1;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416241.1;locus_tag=AC56_RS13100;product=hexitol phosphatase HxpB;protein_id=WP_032278347.1;transl_table=11
NZ_JJLS01000179.1	RefSeq	gene	26581	27171	.	+	.	ID=gene-AC56_RS13095;Name=ydjM;gbkey=Gene;gene=ydjM;gene_biotype=protein_coding;locus_tag=AC56_RS13095;old_locus_tag=AC56_1970
NZ_JJLS01000179.1	Protein Homology	CDS	26581	27171	.	+	0	ID=cds-WP_001297653.1;Parent=gene-AC56_RS13095;Dbxref=GenBank:WP_001297653.1;Name=WP_001297653.1;gbkey=CDS;gene=ydjM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707386.2;locus_tag=AC56_RS13095;product=metal-dependent hydrolase;protein_id=WP_001297653.1;transl_table=11
NZ_JJLS01000179.1	RefSeq	gene	27304	28695	.	+	.	ID=gene-AC56_RS13090;Name=tcyP;gbkey=Gene;gene=tcyP;gene_biotype=protein_coding;locus_tag=AC56_RS13090;old_locus_tag=AC56_1971
NZ_JJLS01000179.1	Protein Homology	CDS	27304	28695	.	+	0	ID=cds-WP_001010696.1;Parent=gene-AC56_RS13090;Dbxref=GenBank:WP_001010696.1;Name=WP_001010696.1;gbkey=CDS;gene=tcyP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416243.1;locus_tag=AC56_RS13090;product=cystine/sulfocysteine:cation symporter;protein_id=WP_001010696.1;transl_table=11
NZ_JJLS01000179.1	RefSeq	pseudogene	28699	28893	.	-	.	ID=gene-AC56_RS13085;Name=AC56_RS13085;end_range=28893,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS13085;old_locus_tag=AC56_1972;partial=true;pseudo=true
NZ_JJLS01000179.1	Protein Homology	CDS	28699	28893	.	-	0	ID=cds-AC56_RS13085;Parent=gene-AC56_RS13085;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=28893,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416244.2;locus_tag=AC56_RS13085;partial=true;product=protein YdjO;pseudo=true;transl_table=11
NZ_JJLS01000179.1	RefSeq	pseudogene	28961	29384	.	+	.	ID=gene-AC56_RS13080;Name=AC56_RS13080;end_range=29384,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS13080;old_locus_tag=AC56_1973;partial=true;pseudo=true
NZ_JJLS01000179.1	Protein Homology	CDS	28961	29384	.	+	0	ID=cds-AC56_RS13080;Parent=gene-AC56_RS13080;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=29384,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS13080;partial=true;product=IS5-like element ISKpn26 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000180.1 1 35477
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000180.1	RefSeq	region	1	35477	.	+	.	ID=NZ_JJLS01000180.1:1..35477;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000180.1	RefSeq	pseudogene	1	453	.	+	.	ID=gene-AC56_RS0126105;Name=AC56_RS0126105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0126105;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000180.1	Protein Homology	CDS	1	453	.	+	0	ID=cds-AC56_RS0126105;Parent=gene-AC56_RS0126105;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS0126105;partial=true;product=IS5-like element ISKpn26 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000180.1	RefSeq	gene	435	620	.	+	.	ID=gene-AC56_RS33740;Name=AC56_RS33740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33740
NZ_JJLS01000180.1	Protein Homology	CDS	435	620	.	+	0	ID=cds-WP_315747914.1;Parent=gene-AC56_RS33740;Dbxref=GenBank:WP_315747914.1;Name=WP_315747914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001340454.1;locus_tag=AC56_RS33740;product=hypothetical protein;protein_id=WP_315747914.1;transl_table=11
NZ_JJLS01000180.1	RefSeq	gene	846	1109	.	-	.	ID=gene-AC56_RS13075;Name=cedA;gbkey=Gene;gene=cedA;gene_biotype=protein_coding;locus_tag=AC56_RS13075;old_locus_tag=AC56_1976
NZ_JJLS01000180.1	Protein Homology	CDS	846	1109	.	-	0	ID=cds-WP_001241561.1;Parent=gene-AC56_RS13075;Dbxref=GenBank:WP_001241561.1;Name=WP_001241561.1;gbkey=CDS;gene=cedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310464.1;locus_tag=AC56_RS13075;product=cell division activator CedA;protein_id=WP_001241561.1;transl_table=11
NZ_JJLS01000180.1	RefSeq	pseudogene	1292	3552	.	+	.	ID=gene-AC56_RS13070;Name=katE;gbkey=Gene;gene=katE;gene_biotype=pseudogene;locus_tag=AC56_RS13070;old_locus_tag=AC56_1978;pseudo=true
NZ_JJLS01000180.1	Protein Homology	CDS	1292	3552	.	+	0	ID=cds-AC56_RS13070;Parent=gene-AC56_RS13070;Note=frameshifted;Ontology_term=GO:0006979,GO:0004096,GO:0020037;gbkey=CDS;gene=katE;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310465.1;locus_tag=AC56_RS13070;product=catalase HPII;pseudo=true;transl_table=11
NZ_JJLS01000180.1	RefSeq	gene	3810	4559	.	-	.	ID=gene-AC56_RS13065;Name=chbG;gbkey=Gene;gene=chbG;gene_biotype=protein_coding;locus_tag=AC56_RS13065;old_locus_tag=AC56_1979
NZ_JJLS01000180.1	Protein Homology	CDS	3810	4559	.	-	0	ID=cds-WP_000440458.1;Parent=gene-AC56_RS13065;Dbxref=GenBank:WP_000440458.1;Name=WP_000440458.1;Ontology_term=GO:0000272,GO:0016811;gbkey=CDS;gene=chbG;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416247.1;locus_tag=AC56_RS13065;product=chitin disaccharide deacetylase;protein_id=WP_000440458.1;transl_table=11
NZ_JJLS01000180.1	RefSeq	gene	4572	5924	.	-	.	ID=gene-AC56_RS13060;Name=celF;gbkey=Gene;gene=celF;gene_biotype=protein_coding;gene_synonym=chbF;locus_tag=AC56_RS13060;old_locus_tag=AC56_1980
NZ_JJLS01000180.1	Protein Homology	CDS	4572	5924	.	-	0	ID=cds-WP_032282712.1;Parent=gene-AC56_RS13060;Dbxref=GenBank:WP_032282712.1;Name=WP_032282712.1;gbkey=CDS;gene=celF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310467.1;locus_tag=AC56_RS13060;product=6-phospho-beta-glucosidase;protein_id=WP_032282712.1;transl_table=11
NZ_JJLS01000180.1	RefSeq	gene	6028	6870	.	-	.	ID=gene-AC56_RS13055;Name=chbR;gbkey=Gene;gene=chbR;gene_biotype=protein_coding;locus_tag=AC56_RS13055;old_locus_tag=AC56_1981
NZ_JJLS01000180.1	Protein Homology	CDS	6028	6870	.	-	0	ID=cds-WP_000983653.1;Parent=gene-AC56_RS13055;Dbxref=GenBank:WP_000983653.1;Name=WP_000983653.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=chbR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416249.1;locus_tag=AC56_RS13055;product=transcriptional regulator ChbR;protein_id=WP_000983653.1;transl_table=11
NZ_JJLS01000180.1	RefSeq	gene	6878	7228	.	-	.	ID=gene-AC56_RS13050;Name=chbA;gbkey=Gene;gene=chbA;gene_biotype=protein_coding;locus_tag=AC56_RS13050;old_locus_tag=AC56_1982
NZ_JJLS01000180.1	Protein Homology	CDS	6878	7228	.	-	0	ID=cds-WP_000968919.1;Parent=gene-AC56_RS13050;Dbxref=GenBank:WP_000968919.1;Name=WP_000968919.1;gbkey=CDS;gene=chbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310469.1;locus_tag=AC56_RS13050;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIA;protein_id=WP_000968919.1;transl_table=11
NZ_JJLS01000180.1	RefSeq	gene	7279	8637	.	-	.	ID=gene-AC56_RS13045;Name=chbC;gbkey=Gene;gene=chbC;gene_biotype=protein_coding;locus_tag=AC56_RS13045;old_locus_tag=AC56_1983
NZ_JJLS01000180.1	Protein Homology	CDS	7279	8637	.	-	0	ID=cds-WP_000073041.1;Parent=gene-AC56_RS13045;Dbxref=GenBank:WP_000073041.1;Name=WP_000073041.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=chbC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416251.1;locus_tag=AC56_RS13045;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;protein_id=WP_000073041.1;transl_table=11
NZ_JJLS01000180.1	RefSeq	gene	8722	9042	.	-	.	ID=gene-AC56_RS13040;Name=chbB;gbkey=Gene;gene=chbB;gene_biotype=protein_coding;locus_tag=AC56_RS13040;old_locus_tag=AC56_1984
NZ_JJLS01000180.1	Protein Homology	CDS	8722	9042	.	-	0	ID=cds-WP_000412169.1;Parent=gene-AC56_RS13040;Dbxref=GenBank:WP_000412169.1;Name=WP_000412169.1;gbkey=CDS;gene=chbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310471.1;locus_tag=AC56_RS13040;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIB;protein_id=WP_000412169.1;transl_table=11
NZ_JJLS01000180.1	RefSeq	gene	9341	9679	.	-	.	ID=gene-AC56_RS13035;Name=osmE;gbkey=Gene;gene=osmE;gene_biotype=protein_coding;locus_tag=AC56_RS13035;old_locus_tag=AC56_1985
NZ_JJLS01000180.1	Protein Homology	CDS	9341	9679	.	-	0	ID=cds-WP_001039044.1;Parent=gene-AC56_RS13035;Dbxref=GenBank:WP_001039044.1;Name=WP_001039044.1;Ontology_term=GO:0019867;gbkey=CDS;gene=osmE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310472.1;locus_tag=AC56_RS13035;product=osmotically-inducible lipoprotein OsmE;protein_id=WP_001039044.1;transl_table=11
NZ_JJLS01000180.1	RefSeq	gene	9881	10708	.	+	.	ID=gene-AC56_RS13030;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=AC56_RS13030;old_locus_tag=AC56_1986
NZ_JJLS01000180.1	Protein Homology	CDS	9881	10708	.	+	0	ID=cds-WP_000175026.1;Parent=gene-AC56_RS13030;Dbxref=GenBank:WP_000175026.1;Name=WP_000175026.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416254.1;locus_tag=AC56_RS13030;product=ammonia-dependent NAD(+) synthetase;protein_id=WP_000175026.1;transl_table=11
NZ_JJLS01000180.1	RefSeq	gene	10938	11825	.	+	.	ID=gene-AC56_RS13025;Name=cho;gbkey=Gene;gene=cho;gene_biotype=protein_coding;locus_tag=AC56_RS13025;old_locus_tag=AC56_1987
NZ_JJLS01000180.1	Protein Homology	CDS	10938	11825	.	+	0	ID=cds-WP_032278350.1;Parent=gene-AC56_RS13025;Dbxref=GenBank:WP_032278350.1;Name=WP_032278350.1;gbkey=CDS;gene=cho;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416255.1;locus_tag=AC56_RS13025;product=excinuclease Cho;protein_id=WP_032278350.1;transl_table=11
NZ_JJLS01000180.1	RefSeq	gene	11785	12360	.	-	.	ID=gene-AC56_RS13020;Name=ves;gbkey=Gene;gene=ves;gene_biotype=protein_coding;locus_tag=AC56_RS13020;old_locus_tag=AC56_1988
NZ_JJLS01000180.1	Protein Homology	CDS	11785	12360	.	-	0	ID=cds-WP_001300480.1;Parent=gene-AC56_RS13020;Dbxref=GenBank:WP_001300480.1;Name=WP_001300480.1;gbkey=CDS;gene=ves;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416256.2;locus_tag=AC56_RS13020;product=environmental stress-induced protein Ves;protein_id=WP_001300480.1;transl_table=11
NZ_JJLS01000180.1	RefSeq	gene	12563	13048	.	-	.	ID=gene-AC56_RS13015;Name=spy;gbkey=Gene;gene=spy;gene_biotype=protein_coding;locus_tag=AC56_RS13015;old_locus_tag=AC56_1989
NZ_JJLS01000180.1	Protein Homology	CDS	12563	13048	.	-	0	ID=cds-WP_001228984.1;Parent=gene-AC56_RS13015;Dbxref=GenBank:WP_001228984.1;Name=WP_001228984.1;Ontology_term=GO:0042597;gbkey=CDS;gene=spy;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416257.1;locus_tag=AC56_RS13015;product=ATP-independent periplasmic protein-refolding chaperone Spy;protein_id=WP_001228984.1;transl_table=11
NZ_JJLS01000180.1	RefSeq	gene	13378	14346	.	-	.	ID=gene-AC56_RS13010;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=AC56_RS13010;old_locus_tag=AC56_1990
NZ_JJLS01000180.1	Protein Homology	CDS	13378	14346	.	-	0	ID=cds-WP_000368506.1;Parent=gene-AC56_RS13010;Dbxref=GenBank:WP_000368506.1;Name=WP_000368506.1;Ontology_term=GO:0006527,GO:0008270,GO:0009017;gbkey=CDS;gene=astE;go_function=zinc ion binding|0008270||IEA,succinylglutamate desuccinylase activity|0009017||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416258.1;locus_tag=AC56_RS13010;product=succinylglutamate desuccinylase;protein_id=WP_000368506.1;transl_table=11
NZ_JJLS01000180.1	RefSeq	gene	14339	15682	.	-	.	ID=gene-AC56_RS13005;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=AC56_RS13005;old_locus_tag=AC56_1991
NZ_JJLS01000180.1	Protein Homology	CDS	14339	15682	.	-	0	ID=cds-WP_000995016.1;Parent=gene-AC56_RS13005;Dbxref=GenBank:WP_000995016.1;Name=WP_000995016.1;Ontology_term=GO:0006527,GO:0009015;gbkey=CDS;gene=astB;go_function=N-succinylarginine dihydrolase activity|0009015||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416259.1;locus_tag=AC56_RS13005;product=N-succinylarginine dihydrolase;protein_id=WP_000995016.1;transl_table=11
NZ_JJLS01000180.1	RefSeq	gene	15679	17157	.	-	.	ID=gene-AC56_RS13000;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=AC56_RS13000;old_locus_tag=AC56_1992
NZ_JJLS01000180.1	Protein Homology	CDS	15679	17157	.	-	0	ID=cds-WP_032278351.1;Parent=gene-AC56_RS13000;Dbxref=GenBank:WP_032278351.1;Name=WP_032278351.1;Ontology_term=GO:0006527,GO:0043824;gbkey=CDS;gene=astD;go_function=succinylglutamate-semialdehyde dehydrogenase activity|0043824||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416260.1;locus_tag=AC56_RS13000;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=WP_032278351.1;transl_table=11
NZ_JJLS01000180.1	RefSeq	gene	17154	18188	.	-	.	ID=gene-AC56_RS12995;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=AC56_RS12995;old_locus_tag=AC56_1993
NZ_JJLS01000180.1	Protein Homology	CDS	17154	18188	.	-	0	ID=cds-WP_000989419.1;Parent=gene-AC56_RS12995;Dbxref=GenBank:WP_000989419.1;Name=WP_000989419.1;Ontology_term=GO:0006527,GO:0008791;gbkey=CDS;gene=astA;go_function=arginine N-succinyltransferase activity|0008791||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310480.1;locus_tag=AC56_RS12995;product=arginine N-succinyltransferase;protein_id=WP_000989419.1;transl_table=11
NZ_JJLS01000180.1	RefSeq	gene	18185	19405	.	-	.	ID=gene-AC56_RS12990;Name=astC;gbkey=Gene;gene=astC;gene_biotype=protein_coding;locus_tag=AC56_RS12990;old_locus_tag=AC56_1994
NZ_JJLS01000180.1	Protein Homology	CDS	18185	19405	.	-	0	ID=cds-WP_000081986.1;Parent=gene-AC56_RS12990;Dbxref=GenBank:WP_000081986.1;Name=WP_000081986.1;gbkey=CDS;gene=astC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416262.1;locus_tag=AC56_RS12990;product=succinylornithine/acetylornithine transaminase;protein_id=WP_000081986.1;transl_table=11
NZ_JJLS01000180.1	RefSeq	gene	19851	20657	.	+	.	ID=gene-AC56_RS12985;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=AC56_RS12985;old_locus_tag=AC56_1996
NZ_JJLS01000180.1	Protein Homology	CDS	19851	20657	.	+	0	ID=cds-WP_000673918.1;Parent=gene-AC56_RS12985;Dbxref=GenBank:WP_000673918.1;Name=WP_000673918.1;Ontology_term=GO:0006281,GO:0003677,GO:0004519,GO:0008311;gbkey=CDS;gene=xthA;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,double-stranded DNA 3'-5' DNA exonuclease activity|0008311||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416263.1;locus_tag=AC56_RS12985;product=exodeoxyribonuclease III;protein_id=WP_000673918.1;transl_table=11
NZ_JJLS01000180.1	RefSeq	gene	20823	21533	.	+	.	ID=gene-AC56_RS12980;Name=AC56_RS12980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS12980;old_locus_tag=AC56_1997
NZ_JJLS01000180.1	Protein Homology	CDS	20823	21533	.	+	0	ID=cds-WP_001300395.1;Parent=gene-AC56_RS12980;Dbxref=GenBank:WP_001300395.1;Name=WP_001300395.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416264.4;locus_tag=AC56_RS12980;product=TVP38/TMEM64 family protein;protein_id=WP_001300395.1;transl_table=11
NZ_JJLS01000180.1	RefSeq	gene	21538	22215	.	+	.	ID=gene-AC56_RS12975;Name=ydjY;gbkey=Gene;gene=ydjY;gene_biotype=protein_coding;locus_tag=AC56_RS12975;old_locus_tag=AC56_1998
NZ_JJLS01000180.1	Protein Homology	CDS	21538	22215	.	+	0	ID=cds-WP_000939212.1;Parent=gene-AC56_RS12975;Dbxref=GenBank:WP_000939212.1;Name=WP_000939212.1;gbkey=CDS;gene=ydjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416265.4;locus_tag=AC56_RS12975;product=lipoprotein YdjY;protein_id=WP_000939212.1;transl_table=11
NZ_JJLS01000180.1	RefSeq	gene	22230	22937	.	+	.	ID=gene-AC56_RS12970;Name=AC56_RS12970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS12970;old_locus_tag=AC56_1999
NZ_JJLS01000180.1	Protein Homology	CDS	22230	22937	.	+	0	ID=cds-WP_000980098.1;Parent=gene-AC56_RS12970;Dbxref=GenBank:WP_000980098.1;Name=WP_000980098.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416266.1;locus_tag=AC56_RS12970;product=TVP38/TMEM64 family protein;protein_id=WP_000980098.1;transl_table=11
NZ_JJLS01000180.1	RefSeq	gene	22937	23485	.	+	.	ID=gene-AC56_RS12965;Name=AC56_RS12965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS12965;old_locus_tag=AC56_2000
NZ_JJLS01000180.1	Protein Homology	CDS	22937	23485	.	+	0	ID=cds-WP_000524097.1;Parent=gene-AC56_RS12965;Dbxref=GenBank:WP_000524097.1;Name=WP_000524097.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416267.1;locus_tag=AC56_RS12965;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_000524097.1;transl_table=11
NZ_JJLS01000180.1	RefSeq	gene	23495	24661	.	+	.	ID=gene-AC56_RS12960;Name=AC56_RS12960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS12960;old_locus_tag=AC56_2001
NZ_JJLS01000180.1	Protein Homology	CDS	23495	24661	.	+	0	ID=cds-WP_032278352.1;Parent=gene-AC56_RS12960;Dbxref=GenBank:WP_032278352.1;Name=WP_032278352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416268.2;locus_tag=AC56_RS12960;product=ABC transporter substrate-binding protein;protein_id=WP_032278352.1;transl_table=11
NZ_JJLS01000180.1	RefSeq	gene	24634	26169	.	+	.	ID=gene-AC56_RS12955;Name=AC56_RS12955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS12955;old_locus_tag=AC56_2002
NZ_JJLS01000180.1	Protein Homology	CDS	24634	26169	.	+	0	ID=cds-WP_032278353.1;Parent=gene-AC56_RS12955;Dbxref=GenBank:WP_032278353.1;Name=WP_032278353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310488.2;locus_tag=AC56_RS12955;product=thiamine ABC transporter permease;protein_id=WP_032278353.1;transl_table=11
NZ_JJLS01000180.1	RefSeq	gene	26169	26822	.	+	.	ID=gene-AC56_RS12950;Name=AC56_RS12950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS12950;old_locus_tag=AC56_2003
NZ_JJLS01000180.1	Protein Homology	CDS	26169	26822	.	+	0	ID=cds-WP_001300558.1;Parent=gene-AC56_RS12950;Dbxref=GenBank:WP_001300558.1;Name=WP_001300558.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416270.1;locus_tag=AC56_RS12950;product=ATP-binding cassette domain-containing protein;protein_id=WP_001300558.1;transl_table=11
NZ_JJLS01000180.1	RefSeq	gene	26889	28196	.	+	.	ID=gene-AC56_RS12945;Name=ynjE;gbkey=Gene;gene=ynjE;gene_biotype=protein_coding;locus_tag=AC56_RS12945;old_locus_tag=AC56_2004
NZ_JJLS01000180.1	Protein Homology	CDS	26889	28196	.	+	0	ID=cds-WP_001297658.1;Parent=gene-AC56_RS12945;Dbxref=GenBank:WP_001297658.1;Name=WP_001297658.1;gbkey=CDS;gene=ynjE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416271.4;locus_tag=AC56_RS12945;product=thiosulfate sulfurtransferase YnjE;protein_id=WP_001297658.1;transl_table=11
NZ_JJLS01000180.1	RefSeq	gene	28205	28825	.	-	.	ID=gene-AC56_RS12940;Name=AC56_RS12940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS12940;old_locus_tag=AC56_2005
NZ_JJLS01000180.1	Protein Homology	CDS	28205	28825	.	-	0	ID=cds-WP_001295484.1;Parent=gene-AC56_RS12940;Dbxref=GenBank:WP_001295484.1;Name=WP_001295484.1;Ontology_term=GO:0008654,GO:0000287,GO:0016780,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416272.2;locus_tag=AC56_RS12940;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_001295484.1;transl_table=11
NZ_JJLS01000180.1	RefSeq	gene	28912	29319	.	+	.	ID=gene-AC56_RS12935;Name=nudG;gbkey=Gene;gene=nudG;gene_biotype=protein_coding;locus_tag=AC56_RS12935;old_locus_tag=AC56_2006
NZ_JJLS01000180.1	Protein Homology	CDS	28912	29319	.	+	0	ID=cds-WP_000781888.1;Parent=gene-AC56_RS12935;Dbxref=GenBank:WP_000781888.1;Name=WP_000781888.1;gbkey=CDS;gene=nudG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416273.1;locus_tag=AC56_RS12935;product=CTP pyrophosphohydrolase;protein_id=WP_000781888.1;transl_table=11
NZ_JJLS01000180.1	RefSeq	gene	29285	29557	.	-	.	ID=gene-AC56_RS12930;Name=AC56_RS12930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS12930;old_locus_tag=AC56_2007
NZ_JJLS01000180.1	Protein Homology	CDS	29285	29557	.	-	0	ID=cds-WP_000085240.1;Parent=gene-AC56_RS12930;Dbxref=GenBank:WP_000085240.1;Name=WP_000085240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416274.1;locus_tag=AC56_RS12930;product=YnjH family protein;protein_id=WP_000085240.1;transl_table=11
NZ_JJLS01000180.1	RefSeq	gene	29793	31136	.	+	.	ID=gene-AC56_RS12925;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=AC56_RS12925;old_locus_tag=AC56_2008
NZ_JJLS01000180.1	Protein Homology	CDS	29793	31136	.	+	0	ID=cds-WP_032209430.1;Parent=gene-AC56_RS12925;Dbxref=GenBank:WP_032209430.1;Name=WP_032209430.1;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310494.1;locus_tag=AC56_RS12925;product=NADP-specific glutamate dehydrogenase;protein_id=WP_032209430.1;transl_table=11
NZ_JJLS01000180.1	RefSeq	gene	31192	33135	.	-	.	ID=gene-AC56_RS12920;Name=AC56_RS12920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS12920;old_locus_tag=AC56_2009
NZ_JJLS01000180.1	Protein Homology	CDS	31192	33135	.	-	0	ID=cds-WP_032180752.1;Parent=gene-AC56_RS12920;Dbxref=GenBank:WP_032180752.1;Name=WP_032180752.1;Ontology_term=GO:0006457,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538823.1;locus_tag=AC56_RS12920;product=J domain-containing protein;protein_id=WP_032180752.1;transl_table=11
NZ_JJLS01000180.1	RefSeq	gene	33132	34832	.	-	.	ID=gene-AC56_RS12915;Name=AC56_RS12915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS12915;old_locus_tag=AC56_2010
NZ_JJLS01000180.1	Protein Homology	CDS	33132	34832	.	-	0	ID=cds-WP_001515428.1;Parent=gene-AC56_RS12915;Dbxref=GenBank:WP_001515428.1;Name=WP_001515428.1;Ontology_term=GO:0005524,GO:0051082,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000583409.1;locus_tag=AC56_RS12915;product=Hsp70 family protein;protein_id=WP_001515428.1;transl_table=11
NZ_JJLS01000180.1	RefSeq	gene	35128	35477	.	+	.	ID=gene-AC56_RS12910;Name=AC56_RS12910;end_range=35477,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS12910;old_locus_tag=AC56_2011;partial=true
NZ_JJLS01000180.1	Protein Homology	CDS	35128	35477	.	+	0	ID=cds-WP_009654159.1;Parent=gene-AC56_RS12910;Dbxref=GenBank:WP_009654159.1;Name=WP_009654159.1;end_range=35477,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS12910;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_009654159.1;transl_table=11
##sequence-region NZ_JJLS01000181.1 1 14765
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000181.1	RefSeq	region	1	14765	.	+	.	ID=NZ_JJLS01000181.1:1..14765;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000181.1	RefSeq	gene	1	378	.	+	.	ID=gene-AC56_RS0126115;Name=AC56_RS0126115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0126115;old_locus_tag=AC56_2012;partial=true;start_range=.,1
NZ_JJLS01000181.1	Protein Homology	CDS	1	378	.	+	0	ID=cds-WP_032277684.1;Parent=gene-AC56_RS0126115;Dbxref=GenBank:WP_032277684.1;Name=WP_032277684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS0126115;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032277684.1;start_range=.,1;transl_table=11
NZ_JJLS01000181.1	RefSeq	gene	360	551	.	+	.	ID=gene-AC56_RS33745;Name=AC56_RS33745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33745
NZ_JJLS01000181.1	Protein Homology	CDS	360	551	.	+	0	ID=cds-WP_349237780.1;Parent=gene-AC56_RS33745;Dbxref=GenBank:WP_349237780.1;Name=WP_349237780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001340350.1;locus_tag=AC56_RS33745;product=hypothetical protein;protein_id=WP_349237780.1;transl_table=11
NZ_JJLS01000181.1	RefSeq	gene	544	2490	.	-	.	ID=gene-AC56_RS12905;Name=topB;gbkey=Gene;gene=topB;gene_biotype=protein_coding;locus_tag=AC56_RS12905;old_locus_tag=AC56_2013
NZ_JJLS01000181.1	Protein Homology	CDS	544	2490	.	-	0	ID=cds-WP_001515429.1;Parent=gene-AC56_RS12905;Dbxref=GenBank:WP_001515429.1;Name=WP_001515429.1;gbkey=CDS;gene=topB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001515429.1;locus_tag=AC56_RS12905;product=DNA topoisomerase III;protein_id=WP_001515429.1;transl_table=11
NZ_JJLS01000181.1	RefSeq	gene	2495	3538	.	-	.	ID=gene-AC56_RS12900;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=AC56_RS12900;old_locus_tag=AC56_2014
NZ_JJLS01000181.1	Protein Homology	CDS	2495	3538	.	-	0	ID=cds-WP_001295485.1;Parent=gene-AC56_RS12900;Dbxref=GenBank:WP_001295485.1;Name=WP_001295485.1;Ontology_term=GO:0016260,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416278.1;locus_tag=AC56_RS12900;product=selenide%2C water dikinase SelD;protein_id=WP_001295485.1;transl_table=11
NZ_JJLS01000181.1	RefSeq	gene	3655	4206	.	-	.	ID=gene-AC56_RS12895;Name=ydjA;gbkey=Gene;gene=ydjA;gene_biotype=protein_coding;locus_tag=AC56_RS12895;old_locus_tag=AC56_2015
NZ_JJLS01000181.1	Protein Homology	CDS	3655	4206	.	-	0	ID=cds-WP_000339283.1;Parent=gene-AC56_RS12895;Dbxref=GenBank:WP_000339283.1;Name=WP_000339283.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydjA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310498.1;locus_tag=AC56_RS12895;product=NAD(P)H nitroreductase;protein_id=WP_000339283.1;transl_table=11
NZ_JJLS01000181.1	RefSeq	gene	4367	6223	.	+	.	ID=gene-AC56_RS12890;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=AC56_RS12890;old_locus_tag=AC56_2016
NZ_JJLS01000181.1	Protein Homology	CDS	4367	6223	.	+	0	ID=cds-WP_032278355.1;Parent=gene-AC56_RS12890;Dbxref=GenBank:WP_032278355.1;Name=WP_032278355.1;Ontology_term=GO:0006465,GO:0008233;gbkey=CDS;gene=sppA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416280.1;locus_tag=AC56_RS12890;product=signal peptide peptidase SppA;protein_id=WP_032278355.1;transl_table=11
NZ_JJLS01000181.1	RefSeq	gene	6390	7406	.	+	.	ID=gene-AC56_RS12885;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=AC56_RS12885;old_locus_tag=AC56_2017
NZ_JJLS01000181.1	Protein Homology	CDS	6390	7406	.	+	0	ID=cds-WP_001170157.1;Parent=gene-AC56_RS12885;Dbxref=GenBank:WP_001170157.1;Name=WP_001170157.1;Ontology_term=GO:0006520,GO:0004067;gbkey=CDS;gene=ansA;go_function=asparaginase activity|0004067||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310501.1;locus_tag=AC56_RS12885;product=asparaginase;protein_id=WP_001170157.1;transl_table=11
NZ_JJLS01000181.1	RefSeq	gene	7417	8058	.	+	.	ID=gene-AC56_RS12880;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=AC56_RS12880;old_locus_tag=AC56_2018
NZ_JJLS01000181.1	Protein Homology	CDS	7417	8058	.	+	0	ID=cds-WP_001135066.1;Parent=gene-AC56_RS12880;Dbxref=GenBank:WP_001135066.1;Name=WP_001135066.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416282.4;locus_tag=AC56_RS12880;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=WP_001135066.1;transl_table=11
NZ_JJLS01000181.1	RefSeq	gene	8151	9509	.	-	.	ID=gene-AC56_RS12875;Name=ydjE;gbkey=Gene;gene=ydjE;gene_biotype=protein_coding;locus_tag=AC56_RS12875;old_locus_tag=AC56_2019
NZ_JJLS01000181.1	Protein Homology	CDS	8151	9509	.	-	0	ID=cds-WP_001300835.1;Parent=gene-AC56_RS12875;Dbxref=GenBank:WP_001300835.1;Name=WP_001300835.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ydjE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416283.1;locus_tag=AC56_RS12875;product=MFS transporter;protein_id=WP_001300835.1;transl_table=11
NZ_JJLS01000181.1	RefSeq	gene	9627	10385	.	-	.	ID=gene-AC56_RS12870;Name=ydjF;gbkey=Gene;gene=ydjF;gene_biotype=protein_coding;locus_tag=AC56_RS12870;old_locus_tag=AC56_2020
NZ_JJLS01000181.1	Protein Homology	CDS	9627	10385	.	-	0	ID=cds-WP_000719088.1;Parent=gene-AC56_RS12870;Dbxref=GenBank:WP_000719088.1;Name=WP_000719088.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=ydjF;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310506.1;locus_tag=AC56_RS12870;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000719088.1;transl_table=11
NZ_JJLS01000181.1	RefSeq	gene	10522	11502	.	-	.	ID=gene-AC56_RS12865;Name=ydjG;gbkey=Gene;gene=ydjG;gene_biotype=protein_coding;locus_tag=AC56_RS12865;old_locus_tag=AC56_2021
NZ_JJLS01000181.1	Protein Homology	CDS	10522	11502	.	-	0	ID=cds-WP_000723723.1;Parent=gene-AC56_RS12865;Dbxref=GenBank:WP_000723723.1;Name=WP_000723723.1;Ontology_term=GO:0019170;gbkey=CDS;gene=ydjG;go_function=methylglyoxal reductase (NADH) activity|0019170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416285.1;locus_tag=AC56_RS12865;product=NADH-dependent methylglyoxal reductase;protein_id=WP_000723723.1;transl_table=11
NZ_JJLS01000181.1	RefSeq	gene	11512	12459	.	-	.	ID=gene-AC56_RS12860;Name=ydjH;gbkey=Gene;gene=ydjH;gene_biotype=protein_coding;locus_tag=AC56_RS12860;old_locus_tag=AC56_2022
NZ_JJLS01000181.1	Protein Homology	CDS	11512	12459	.	-	0	ID=cds-WP_001299568.1;Parent=gene-AC56_RS12860;Dbxref=GenBank:WP_001299568.1;Name=WP_001299568.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;gene=ydjH;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416286.4;locus_tag=AC56_RS12860;product=sugar kinase;protein_id=WP_001299568.1;transl_table=11
NZ_JJLS01000181.1	RefSeq	gene	12464	13300	.	-	.	ID=gene-AC56_RS12855;Name=ydjI;gbkey=Gene;gene=ydjI;gene_biotype=protein_coding;locus_tag=AC56_RS12855;old_locus_tag=AC56_2023
NZ_JJLS01000181.1	Protein Homology	CDS	12464	13300	.	-	0	ID=cds-WP_000878895.1;Parent=gene-AC56_RS12855;Dbxref=GenBank:WP_000878895.1;Name=WP_000878895.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=ydjI;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416287.1;locus_tag=AC56_RS12855;product=ketose-bisphosphate aldolase;protein_id=WP_000878895.1;transl_table=11
NZ_JJLS01000181.1	RefSeq	pseudogene	13321	14295	.	-	.	ID=gene-AC56_RS0126130;Name=ydjJ;end_range=14295,.;gbkey=Gene;gene=ydjJ;gene_biotype=pseudogene;locus_tag=AC56_RS0126130;old_locus_tag=AC56_2024;partial=true;pseudo=true
NZ_JJLS01000181.1	Protein Homology	CDS	13321	14295	.	-	0	ID=cds-AC56_RS0126130;Parent=gene-AC56_RS0126130;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=14295,.;gbkey=CDS;gene=ydjJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416288.1;locus_tag=AC56_RS0126130;partial=true;product=NAD(P)-dependent alcohol dehydrogenase;pseudo=true;transl_table=11
NZ_JJLS01000181.1	RefSeq	pseudogene	14363	14765	.	+	.	ID=gene-AC56_RS12850;Name=AC56_RS12850;end_range=14765,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS12850;old_locus_tag=AC56_2025;partial=true;pseudo=true
NZ_JJLS01000181.1	Protein Homology	CDS	14363	14765	.	+	0	ID=cds-AC56_RS12850;Parent=gene-AC56_RS12850;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=14765,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS12850;partial=true;product=IS5-like element ISKpn26 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000182.1 1 12300
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000182.1	RefSeq	region	1	12300	.	+	.	ID=NZ_JJLS01000182.1:1..12300;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000182.1	RefSeq	gene	1	192	.	+	.	ID=gene-AC56_RS12845;Name=AC56_RS12845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS12845;old_locus_tag=AC56_2026;partial=true;start_range=.,1
NZ_JJLS01000182.1	Protein Homology	CDS	1	192	.	+	0	ID=cds-WP_004154149.1;Parent=gene-AC56_RS12845;Dbxref=GenBank:WP_004154149.1;Name=WP_004154149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS12845;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_004154149.1;start_range=.,1;transl_table=11
NZ_JJLS01000182.1	RefSeq	gene	174	362	.	+	.	ID=gene-AC56_RS33750;Name=AC56_RS33750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33750
NZ_JJLS01000182.1	Protein Homology	CDS	174	362	.	+	0	ID=cds-WP_349237785.1;Parent=gene-AC56_RS33750;Dbxref=GenBank:WP_349237785.1;Name=WP_349237785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001340336.1;locus_tag=AC56_RS33750;product=hypothetical protein;protein_id=WP_349237785.1;transl_table=11
NZ_JJLS01000182.1	RefSeq	pseudogene	336	413	.	-	.	ID=gene-AC56_RS32755;Name=AC56_RS32755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS32755;partial=true;pseudo=true;start_range=.,336
NZ_JJLS01000182.1	Protein Homology	CDS	336	413	.	-	0	ID=cds-AC56_RS32755;Parent=gene-AC56_RS32755;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310510.1;locus_tag=AC56_RS32755;partial=true;product=molecular chaperone GroES;pseudo=true;start_range=.,336;transl_table=11
NZ_JJLS01000182.1	RefSeq	gene	430	1809	.	-	.	ID=gene-AC56_RS12840;Name=ydjK;gbkey=Gene;gene=ydjK;gene_biotype=protein_coding;locus_tag=AC56_RS12840;old_locus_tag=AC56_2028
NZ_JJLS01000182.1	Protein Homology	CDS	430	1809	.	-	0	ID=cds-WP_001466200.1;Parent=gene-AC56_RS12840;Dbxref=GenBank:WP_001466200.1;Name=WP_001466200.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ydjK;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416289.1;locus_tag=AC56_RS12840;product=MFS transporter;protein_id=WP_001466200.1;transl_table=11
NZ_JJLS01000182.1	RefSeq	gene	1836	2912	.	-	.	ID=gene-AC56_RS12835;Name=ydjL;gbkey=Gene;gene=ydjL;gene_biotype=protein_coding;locus_tag=AC56_RS12835;old_locus_tag=AC56_2029
NZ_JJLS01000182.1	Protein Homology	CDS	1836	2912	.	-	0	ID=cds-WP_000645221.1;Parent=gene-AC56_RS12835;Dbxref=GenBank:WP_000645221.1;Name=WP_000645221.1;gbkey=CDS;gene=ydjL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416290.1;locus_tag=AC56_RS12835;product=zinc-binding dehydrogenase;protein_id=WP_000645221.1;transl_table=11
NZ_JJLS01000182.1	RefSeq	gene	3282	3554	.	-	.	ID=gene-AC56_RS12830;Name=yeaC;gbkey=Gene;gene=yeaC;gene_biotype=protein_coding;locus_tag=AC56_RS12830;old_locus_tag=AC56_2030
NZ_JJLS01000182.1	Protein Homology	CDS	3282	3554	.	-	0	ID=cds-WP_001300415.1;Parent=gene-AC56_RS12830;Dbxref=GenBank:WP_001300415.1;Name=WP_001300415.1;gbkey=CDS;gene=yeaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416291.4;locus_tag=AC56_RS12830;product=YeaC family protein;protein_id=WP_001300415.1;transl_table=11
NZ_JJLS01000182.1	RefSeq	gene	3596	4009	.	-	.	ID=gene-AC56_RS12825;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=AC56_RS12825;old_locus_tag=AC56_2031
NZ_JJLS01000182.1	Protein Homology	CDS	3596	4009	.	-	0	ID=cds-WP_032278358.1;Parent=gene-AC56_RS12825;Dbxref=GenBank:WP_032278358.1;Name=WP_032278358.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310514.1;locus_tag=AC56_RS12825;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_032278358.1;transl_table=11
NZ_JJLS01000182.1	RefSeq	gene	4351	5346	.	+	.	ID=gene-AC56_RS12820;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=AC56_RS12820;old_locus_tag=AC56_2032
NZ_JJLS01000182.1	Protein Homology	CDS	4351	5346	.	+	0	ID=cds-WP_000153502.1;Parent=gene-AC56_RS12820;Dbxref=GenBank:WP_000153502.1;Name=WP_000153502.1;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322611.1;locus_tag=AC56_RS12820;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_000153502.1;transl_table=11
NZ_JJLS01000182.1	RefSeq	gene	5430	6314	.	+	.	ID=gene-AC56_RS12815;Name=yeaD;gbkey=Gene;gene=yeaD;gene_biotype=protein_coding;locus_tag=AC56_RS12815;old_locus_tag=AC56_2033
NZ_JJLS01000182.1	Protein Homology	CDS	5430	6314	.	+	0	ID=cds-WP_032278359.1;Parent=gene-AC56_RS12815;Dbxref=GenBank:WP_032278359.1;Name=WP_032278359.1;Ontology_term=GO:0005975,GO:0016857;gbkey=CDS;gene=yeaD;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707334.2;locus_tag=AC56_RS12815;product=D-hexose-6-phosphate mutarotase;protein_id=WP_032278359.1;transl_table=11
NZ_JJLS01000182.1	RefSeq	gene	6362	7216	.	-	.	ID=gene-AC56_RS12810;Name=yeaE;gbkey=Gene;gene=yeaE;gene_biotype=protein_coding;locus_tag=AC56_RS12810;old_locus_tag=AC56_2034
NZ_JJLS01000182.1	Protein Homology	CDS	6362	7216	.	-	0	ID=cds-WP_001186374.1;Parent=gene-AC56_RS12810;Dbxref=GenBank:WP_001186374.1;Name=WP_001186374.1;gbkey=CDS;gene=yeaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416295.1;locus_tag=AC56_RS12810;product=methylglyoxal reductase YeaE;protein_id=WP_001186374.1;transl_table=11
NZ_JJLS01000182.1	RefSeq	gene	7306	8052	.	-	.	ID=gene-AC56_RS12805;Name=mipA;gbkey=Gene;gene=mipA;gene_biotype=protein_coding;locus_tag=AC56_RS12805;old_locus_tag=AC56_2035
NZ_JJLS01000182.1	Protein Homology	CDS	7306	8052	.	-	0	ID=cds-WP_000163771.1;Parent=gene-AC56_RS12805;Dbxref=GenBank:WP_000163771.1;Name=WP_000163771.1;gbkey=CDS;gene=mipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416296.1;locus_tag=AC56_RS12805;product=scaffolding protein MipA;protein_id=WP_000163771.1;transl_table=11
NZ_JJLS01000182.1	RefSeq	gene	8488	10422	.	+	.	ID=gene-AC56_RS12800;Name=yeaG;gbkey=Gene;gene=yeaG;gene_biotype=protein_coding;locus_tag=AC56_RS12800;old_locus_tag=AC56_2036
NZ_JJLS01000182.1	Protein Homology	CDS	8488	10422	.	+	0	ID=cds-WP_001019882.1;Parent=gene-AC56_RS12800;Dbxref=GenBank:WP_001019882.1;Name=WP_001019882.1;gbkey=CDS;gene=yeaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011411173.1;locus_tag=AC56_RS12800;product=protein kinase YeaG;protein_id=WP_001019882.1;transl_table=11
NZ_JJLS01000182.1	RefSeq	gene	10535	11818	.	+	.	ID=gene-AC56_RS12795;Name=yeaH;gbkey=Gene;gene=yeaH;gene_biotype=protein_coding;locus_tag=AC56_RS12795;old_locus_tag=AC56_2037
NZ_JJLS01000182.1	Protein Homology	CDS	10535	11818	.	+	0	ID=cds-WP_000219686.1;Parent=gene-AC56_RS12795;Dbxref=GenBank:WP_000219686.1;Name=WP_000219686.1;gbkey=CDS;gene=yeaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310520.1;locus_tag=AC56_RS12795;product=YeaH/YhbH family protein;protein_id=WP_000219686.1;transl_table=11
NZ_JJLS01000182.1	RefSeq	pseudogene	11960	12300	.	+	.	ID=gene-AC56_RS0126140;Name=AC56_RS0126140;end_range=12300,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0126140;partial=true;pseudo=true
NZ_JJLS01000182.1	Protein Homology	CDS	11960	12300	.	+	0	ID=cds-AC56_RS0126140;Parent=gene-AC56_RS0126140;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=12300,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS0126140;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000183.1 1 2555
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000183.1	RefSeq	region	1	2555	.	+	.	ID=NZ_JJLS01000183.1:1..2555;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000183.1	RefSeq	gene	1	431	.	+	.	ID=gene-AC56_RS12790;Name=AC56_RS12790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS12790;old_locus_tag=AC56_2039;partial=true;start_range=.,1
NZ_JJLS01000183.1	Protein Homology	CDS	1	431	.	+	2	ID=cds-WP_000315021.1;Parent=gene-AC56_RS12790;Dbxref=GenBank:WP_000315021.1;Name=WP_000315021.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS12790;partial=true;product=IS1 family transposase;protein_id=WP_000315021.1;start_range=.,1;transl_table=11
NZ_JJLS01000183.1	RefSeq	gene	516	1991	.	+	.	ID=gene-AC56_RS12785;Name=AC56_RS12785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS12785;old_locus_tag=AC56_2040
NZ_JJLS01000183.1	Protein Homology	CDS	516	1991	.	+	0	ID=cds-WP_000616417.1;Parent=gene-AC56_RS12785;Dbxref=GenBank:WP_000616417.1;Name=WP_000616417.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621;gbkey=CDS;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416299.1;locus_tag=AC56_RS12785;product=sensor domain-containing diguanylate cyclase;protein_id=WP_000616417.1;transl_table=11
NZ_JJLS01000183.1	RefSeq	gene	2299	2555	.	-	.	ID=gene-AC56_RS12780;Name=AC56_RS12780;end_range=2555,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS12780;old_locus_tag=AC56_2042;partial=true
NZ_JJLS01000183.1	Protein Homology	CDS	2299	2555	.	-	2	ID=cds-WP_032277656.1;Parent=gene-AC56_RS12780;Dbxref=GenBank:WP_032277656.1;Name=WP_032277656.1;end_range=2555,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS12780;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032277656.1;transl_table=11
##sequence-region NZ_JJLS01000184.1 1 9442
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000184.1	RefSeq	region	1	9442	.	+	.	ID=NZ_JJLS01000184.1:1..9442;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000184.1	RefSeq	pseudogene	1	423	.	-	.	ID=gene-AC56_RS12775;Name=AC56_RS12775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS12775;old_locus_tag=AC56_2043;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000184.1	Protein Homology	CDS	1	423	.	-	0	ID=cds-AC56_RS12775;Parent=gene-AC56_RS12775;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS12775;partial=true;product=IS5-like element ISKpn26 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000184.1	RefSeq	gene	516	2006	.	+	.	ID=gene-AC56_RS12770;Name=dgcJ;gbkey=Gene;gene=dgcJ;gene_biotype=protein_coding;locus_tag=AC56_RS12770;old_locus_tag=AC56_2044
NZ_JJLS01000184.1	Protein Homology	CDS	516	2006	.	+	0	ID=cds-WP_032278366.1;Parent=gene-AC56_RS12770;Dbxref=GenBank:WP_032278366.1;Name=WP_032278366.1;Ontology_term=GO:0043709,GO:1902201,GO:0052621;gbkey=CDS;gene=dgcJ;go_function=diguanylate cyclase activity|0052621||IEA;go_process=cell adhesion involved in single-species biofilm formation|0043709||IEA,negative regulation of bacterial-type flagellum-dependent cell motility|1902201||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416300.2;locus_tag=AC56_RS12770;product=diguanylate cyclase DgcJ;protein_id=WP_032278366.1;transl_table=11
NZ_JJLS01000184.1	RefSeq	gene	2049	2552	.	+	.	ID=gene-AC56_RS12765;Name=yeaK;gbkey=Gene;gene=yeaK;gene_biotype=protein_coding;locus_tag=AC56_RS12765;old_locus_tag=AC56_2045
NZ_JJLS01000184.1	Protein Homology	CDS	2049	2552	.	+	0	ID=cds-WP_000138051.1;Parent=gene-AC56_RS12765;Dbxref=GenBank:WP_000138051.1;Name=WP_000138051.1;gbkey=CDS;gene=yeaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310523.1;locus_tag=AC56_RS12765;product=mischarged aminoacyl-tRNA deacylase;protein_id=WP_000138051.1;transl_table=11
NZ_JJLS01000184.1	RefSeq	gene	2553	2657	.	-	.	ID=gene-AC56_RS12760;Name=yoaI;gbkey=Gene;gene=yoaI;gene_biotype=protein_coding;locus_tag=AC56_RS12760;old_locus_tag=AC56_2046
NZ_JJLS01000184.1	Protein Homology	CDS	2553	2657	.	-	0	ID=cds-WP_000999630.1;Parent=gene-AC56_RS12760;Dbxref=GenBank:WP_000999630.1;Name=WP_000999630.1;gbkey=CDS;gene=yoaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416302.2;locus_tag=AC56_RS12760;product=small membrane protein YoaI;protein_id=WP_000999630.1;transl_table=11
NZ_JJLS01000184.1	RefSeq	gene	2827	3273	.	+	.	ID=gene-AC56_RS12755;Name=yeaL;gbkey=Gene;gene=yeaL;gene_biotype=protein_coding;locus_tag=AC56_RS12755;old_locus_tag=AC56_2047
NZ_JJLS01000184.1	Protein Homology	CDS	2827	3273	.	+	0	ID=cds-WP_000460707.1;Parent=gene-AC56_RS12755;Dbxref=GenBank:WP_000460707.1;Name=WP_000460707.1;gbkey=CDS;gene=yeaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416303.1;locus_tag=AC56_RS12755;product=DUF441 domain-containing protein;protein_id=WP_000460707.1;transl_table=11
NZ_JJLS01000184.1	RefSeq	pseudogene	3230	4050	.	-	.	ID=gene-AC56_RS12750;Name=nimR;gbkey=Gene;gene=nimR;gene_biotype=pseudogene;locus_tag=AC56_RS12750;old_locus_tag=AC56_2048;pseudo=true
NZ_JJLS01000184.1	Protein Homology	CDS	3230	4050	.	-	0	ID=cds-AC56_RS12750;Parent=gene-AC56_RS12750;Note=frameshifted;gbkey=CDS;gene=nimR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416304.1;locus_tag=AC56_RS12750;product=DNA-binding transcriptional regulator NimR;pseudo=true;transl_table=11
NZ_JJLS01000184.1	RefSeq	gene	4147	5328	.	+	.	ID=gene-AC56_RS12745;Name=nimT;gbkey=Gene;gene=nimT;gene_biotype=protein_coding;locus_tag=AC56_RS12745;old_locus_tag=AC56_2049
NZ_JJLS01000184.1	Protein Homology	CDS	4147	5328	.	+	0	ID=cds-WP_000128491.1;Parent=gene-AC56_RS12745;Dbxref=GenBank:WP_000128491.1;Name=WP_000128491.1;gbkey=CDS;gene=nimT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416305.1;locus_tag=AC56_RS12745;product=2-nitroimidazole transporter;protein_id=WP_000128491.1;transl_table=11
NZ_JJLS01000184.1	RefSeq	gene	5383	5730	.	+	.	ID=gene-AC56_RS12740;Name=yeaO;gbkey=Gene;gene=yeaO;gene_biotype=protein_coding;locus_tag=AC56_RS12740;old_locus_tag=AC56_2050
NZ_JJLS01000184.1	Protein Homology	CDS	5383	5730	.	+	0	ID=cds-WP_001326526.1;Parent=gene-AC56_RS12740;Dbxref=GenBank:WP_001326526.1;Name=WP_001326526.1;gbkey=CDS;gene=yeaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416306.2;locus_tag=AC56_RS12740;product=DUF488 domain-containing protein;protein_id=WP_001326526.1;transl_table=11
NZ_JJLS01000184.1	RefSeq	gene	5752	6006	.	-	.	ID=gene-AC56_RS12735;Name=yoaF;gbkey=Gene;gene=yoaF;gene_biotype=protein_coding;locus_tag=AC56_RS12735;old_locus_tag=AC56_2051
NZ_JJLS01000184.1	Protein Homology	CDS	5752	6006	.	-	0	ID=cds-WP_000691930.1;Parent=gene-AC56_RS12735;Dbxref=GenBank:WP_000691930.1;Name=WP_000691930.1;gbkey=CDS;gene=yoaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416307.1;locus_tag=AC56_RS12735;product=DUF333 domain-containing lipoprotein YoaF;protein_id=WP_000691930.1;transl_table=11
NZ_JJLS01000184.1	RefSeq	gene	6189	7214	.	+	.	ID=gene-AC56_RS12730;Name=dgcP;gbkey=Gene;gene=dgcP;gene_biotype=protein_coding;locus_tag=AC56_RS12730;old_locus_tag=AC56_2053
NZ_JJLS01000184.1	Protein Homology	CDS	6189	7214	.	+	0	ID=cds-WP_001310896.1;Parent=gene-AC56_RS12730;Dbxref=GenBank:WP_001310896.1;Name=WP_001310896.1;gbkey=CDS;gene=dgcP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416308.4;locus_tag=AC56_RS12730;product=diguanylate cyclase DgcP;protein_id=WP_001310896.1;transl_table=11
NZ_JJLS01000184.1	RefSeq	gene	7247	7345	.	+	.	ID=gene-AC56_RS0126145;Name=yoaK;gbkey=Gene;gene=yoaK;gene_biotype=protein_coding;locus_tag=AC56_RS0126145
NZ_JJLS01000184.1	Protein Homology	CDS	7247	7345	.	+	0	ID=cds-WP_001219350.1;Parent=gene-AC56_RS0126145;Dbxref=GenBank:WP_001219350.1;Name=WP_001219350.1;gbkey=CDS;gene=yoaK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791242.1;locus_tag=AC56_RS0126145;product=YoaK family small membrane protein;protein_id=WP_001219350.1;transl_table=11
NZ_JJLS01000184.1	RefSeq	gene	7348	7422	.	+	.	ID=gene-AC56_RS31260;Name=yoaJ;gbkey=Gene;gene=yoaJ;gene_biotype=protein_coding;locus_tag=AC56_RS31260
NZ_JJLS01000184.1	Protein Homology	CDS	7348	7422	.	+	0	ID=cds-WP_001386836.1;Parent=gene-AC56_RS31260;Dbxref=GenBank:WP_001386836.1;Name=WP_001386836.1;gbkey=CDS;gene=yoaJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791243.1;locus_tag=AC56_RS31260;product=protein YoaJ;protein_id=WP_001386836.1;transl_table=11
NZ_JJLS01000184.1	RefSeq	gene	7481	7729	.	-	.	ID=gene-AC56_RS12725;Name=yeaQ;gbkey=Gene;gene=yeaQ;gene_biotype=protein_coding;locus_tag=AC56_RS12725;old_locus_tag=AC56_2055
NZ_JJLS01000184.1	Protein Homology	CDS	7481	7729	.	-	0	ID=cds-WP_000512153.1;Parent=gene-AC56_RS12725;Dbxref=GenBank:WP_000512153.1;Name=WP_000512153.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yeaQ;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310531.1;locus_tag=AC56_RS12725;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000512153.1;transl_table=11
NZ_JJLS01000184.1	RefSeq	gene	7877	8059	.	-	.	ID=gene-AC56_RS12720;Name=yoaG;gbkey=Gene;gene=yoaG;gene_biotype=protein_coding;locus_tag=AC56_RS12720;old_locus_tag=AC56_2056
NZ_JJLS01000184.1	Protein Homology	CDS	7877	8059	.	-	0	ID=cds-WP_000513737.1;Parent=gene-AC56_RS12720;Dbxref=GenBank:WP_000513737.1;Name=WP_000513737.1;gbkey=CDS;gene=yoaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310532.1;locus_tag=AC56_RS12720;product=DUF1869 domain-containing protein;protein_id=WP_000513737.1;transl_table=11
NZ_JJLS01000184.1	RefSeq	pseudogene	8063	8311	.	-	.	ID=gene-AC56_RS12715;Name=yeaR;end_range=8311,.;gbkey=Gene;gene=yeaR;gene_biotype=pseudogene;locus_tag=AC56_RS12715;old_locus_tag=AC56_2057;partial=true;pseudo=true
NZ_JJLS01000184.1	Protein Homology	CDS	8063	8311	.	-	0	ID=cds-AC56_RS12715;Parent=gene-AC56_RS12715;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=8311,.;gbkey=CDS;gene=yeaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310533.1;locus_tag=AC56_RS12715;partial=true;product=DUF1971 domain-containing protein YeaR;pseudo=true;transl_table=11
NZ_JJLS01000184.1	RefSeq	gene	8482	9442	.	-	.	ID=gene-AC56_RS12710;Name=AC56_RS12710;end_range=9442,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS12710;old_locus_tag=AC56_2058;partial=true
NZ_JJLS01000184.1	Protein Homology	CDS	8482	9442	.	-	1	ID=cds-WP_032282478.1-8;Parent=gene-AC56_RS12710;Dbxref=GenBank:WP_032282478.1;Name=WP_032282478.1;Ontology_term=GO:0006313,GO:0004803;end_range=9442,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS12710;partial=true;product=IS4-like element IS421 family transposase;protein_id=WP_032282478.1;transl_table=11
##sequence-region NZ_JJLS01000185.1 1 84797
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000185.1	RefSeq	region	1	84797	.	+	.	ID=NZ_JJLS01000185.1:1..84797;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000185.1	RefSeq	pseudogene	1	469	.	-	.	ID=gene-AC56_RS0126150;Name=AC56_RS0126150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0126150;old_locus_tag=AC56_2059;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000185.1	Protein Homology	CDS	1	469	.	-	0	ID=cds-AC56_RS0126150;Parent=gene-AC56_RS0126150;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS0126150;partial=true;product=IS4-like element IS186A family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000185.1	RefSeq	pseudogene	524	646	.	-	.	ID=gene-AC56_RS32160;Name=AC56_RS32160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS32160;partial=true;pseudo=true;start_range=.,524
NZ_JJLS01000185.1	Protein Homology	CDS	524	646	.	-	0	ID=cds-AC56_RS32160;Parent=gene-AC56_RS32160;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310533.1;locus_tag=AC56_RS32160;partial=true;product=DUF1971 domain-containing protein;pseudo=true;start_range=.,524;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	819	1457	.	-	.	ID=gene-AC56_RS12705;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;locus_tag=AC56_RS12705;old_locus_tag=AC56_2061
NZ_JJLS01000185.1	Protein Homology	CDS	819	1457	.	-	0	ID=cds-WP_000457207.1;Parent=gene-AC56_RS12705;Dbxref=GenBank:WP_000457207.1;Name=WP_000457207.1;Ontology_term=GO:0006865;gbkey=CDS;gene=leuE;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416312.1;locus_tag=AC56_RS12705;product=leucine efflux protein LeuE;protein_id=WP_000457207.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	1584	2507	.	-	.	ID=gene-AC56_RS12700;Name=dmlR;gbkey=Gene;gene=dmlR;gene_biotype=protein_coding;locus_tag=AC56_RS12700;old_locus_tag=AC56_2062
NZ_JJLS01000185.1	Protein Homology	CDS	1584	2507	.	-	0	ID=cds-WP_001300522.1;Parent=gene-AC56_RS12700;Dbxref=GenBank:WP_001300522.1;Name=WP_001300522.1;gbkey=CDS;gene=dmlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310535.2;locus_tag=AC56_RS12700;product=DNA-binding transcriptional regulator DmlR;protein_id=WP_001300522.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	2610	3695	.	+	.	ID=gene-AC56_RS12695;Name=dmlA;gbkey=Gene;gene=dmlA;gene_biotype=protein_coding;locus_tag=AC56_RS12695;old_locus_tag=AC56_2063
NZ_JJLS01000185.1	Protein Homology	CDS	2610	3695	.	+	0	ID=cds-WP_000978494.1;Parent=gene-AC56_RS12695;Dbxref=GenBank:WP_000978494.1;Name=WP_000978494.1;gbkey=CDS;gene=dmlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416314.1;locus_tag=AC56_RS12695;product=multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase;protein_id=WP_000978494.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	3946	5556	.	+	.	ID=gene-AC56_RS12690;Name=yeaV;gbkey=Gene;gene=yeaV;gene_biotype=protein_coding;locus_tag=AC56_RS12690;old_locus_tag=AC56_2064
NZ_JJLS01000185.1	Protein Homology	CDS	3946	5556	.	+	0	ID=cds-WP_032278370.1;Parent=gene-AC56_RS12690;Dbxref=GenBank:WP_032278370.1;Name=WP_032278370.1;gbkey=CDS;gene=yeaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310537.2;locus_tag=AC56_RS12690;product=BCCT family transporter YeaV;protein_id=WP_032278370.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	5588	6712	.	+	.	ID=gene-AC56_RS12685;Name=yeaW;gbkey=Gene;gene=yeaW;gene_biotype=protein_coding;locus_tag=AC56_RS12685;old_locus_tag=AC56_2065
NZ_JJLS01000185.1	Protein Homology	CDS	5588	6712	.	+	0	ID=cds-WP_032278372.1;Parent=gene-AC56_RS12685;Dbxref=GenBank:WP_032278372.1;Name=WP_032278372.1;gbkey=CDS;gene=yeaW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310538.1;locus_tag=AC56_RS12685;product=carnitine monooxygenase%2C oxygenase subunit YeaW;protein_id=WP_032278372.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	6768	7733	.	+	.	ID=gene-AC56_RS12680;Name=yeaX;gbkey=Gene;gene=yeaX;gene_biotype=protein_coding;locus_tag=AC56_RS12680;old_locus_tag=AC56_2066
NZ_JJLS01000185.1	Protein Homology	CDS	6768	7733	.	+	0	ID=cds-WP_021553679.1;Parent=gene-AC56_RS12680;Dbxref=GenBank:WP_021553679.1;Name=WP_021553679.1;gbkey=CDS;gene=yeaX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416317.1;locus_tag=AC56_RS12680;product=carnitine monooxygenase reductase subunit YeaX;protein_id=WP_021553679.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	7787	8902	.	-	.	ID=gene-AC56_RS12675;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=AC56_RS12675;old_locus_tag=AC56_2067
NZ_JJLS01000185.1	Protein Homology	CDS	7787	8902	.	-	0	ID=cds-WP_021553680.1;Parent=gene-AC56_RS12675;Dbxref=GenBank:WP_021553680.1;Name=WP_021553680.1;Ontology_term=GO:0008033,GO:0003676,GO:0008408,GO:0033890;gbkey=CDS;gene=rnd;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA,ribonuclease D activity|0033890||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310540.2;locus_tag=AC56_RS12675;product=ribonuclease D;protein_id=WP_021553680.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	8984	10669	.	-	.	ID=gene-AC56_RS12670;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=AC56_RS12670;old_locus_tag=AC56_2068
NZ_JJLS01000185.1	Protein Homology	CDS	8984	10669	.	-	0	ID=cds-WP_000758422.1;Parent=gene-AC56_RS12670;Dbxref=GenBank:WP_000758422.1;Name=WP_000758422.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416319.1;locus_tag=AC56_RS12670;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=WP_000758422.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	10874	11455	.	-	.	ID=gene-AC56_RS12665;Name=yeaY;gbkey=Gene;gene=yeaY;gene_biotype=protein_coding;locus_tag=AC56_RS12665;old_locus_tag=AC56_2069
NZ_JJLS01000185.1	Protein Homology	CDS	10874	11455	.	-	0	ID=cds-WP_032282719.1;Parent=gene-AC56_RS12665;Dbxref=GenBank:WP_032282719.1;Name=WP_032282719.1;gbkey=CDS;gene=yeaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416320.1;locus_tag=AC56_RS12665;product=Slp family lipoprotein YeaY;protein_id=WP_032282719.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	11495	12190	.	-	.	ID=gene-AC56_RS12660;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=AC56_RS12660;old_locus_tag=AC56_2070
NZ_JJLS01000185.1	Protein Homology	CDS	11495	12190	.	-	0	ID=cds-WP_001220966.1;Parent=gene-AC56_RS12660;Dbxref=GenBank:WP_001220966.1;Name=WP_001220966.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416321.1;locus_tag=AC56_RS12660;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_001220966.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	12248	14158	.	-	.	ID=gene-AC56_RS12655;Name=yoaA;gbkey=Gene;gene=yoaA;gene_biotype=protein_coding;locus_tag=AC56_RS12655;old_locus_tag=AC56_2071
NZ_JJLS01000185.1	Protein Homology	CDS	12248	14158	.	-	0	ID=cds-WP_032278375.1;Parent=gene-AC56_RS12655;Dbxref=GenBank:WP_032278375.1;Name=WP_032278375.1;Ontology_term=GO:0003676,GO:0003677,GO:0004386,GO:0005524;gbkey=CDS;gene=yoaA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310544.1;locus_tag=AC56_RS12655;product=ATP-dependent DNA helicase;protein_id=WP_032278375.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	14290	14634	.	+	.	ID=gene-AC56_RS12650;Name=yoaB;gbkey=Gene;gene=yoaB;gene_biotype=protein_coding;locus_tag=AC56_RS12650;old_locus_tag=AC56_2072
NZ_JJLS01000185.1	Protein Homology	CDS	14290	14634	.	+	0	ID=cds-WP_032278376.1;Parent=gene-AC56_RS12650;Dbxref=GenBank:WP_032278376.1;Name=WP_032278376.1;gbkey=CDS;gene=yoaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416323.4;locus_tag=AC56_RS12650;product=RidA family protein;protein_id=WP_032278376.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	pseudogene	15056	15354	.	+	.	ID=gene-AC56_RS0126160;Name=yoaC;gbkey=Gene;gene=yoaC;gene_biotype=pseudogene;locus_tag=AC56_RS0126160;old_locus_tag=AC56_2073;pseudo=true
NZ_JJLS01000185.1	Protein Homology	CDS	15056	15354	.	+	0	ID=cds-AC56_RS0126160;Parent=gene-AC56_RS0126160;Note=frameshifted;gbkey=CDS;gene=yoaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416324.2;locus_tag=AC56_RS0126160;product=DUF1889 family protein;pseudo=true;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	15474	15653	.	-	.	ID=gene-AC56_RS12645;Name=yoaH;gbkey=Gene;gene=yoaH;gene_biotype=protein_coding;locus_tag=AC56_RS12645;old_locus_tag=AC56_2074
NZ_JJLS01000185.1	Protein Homology	CDS	15474	15653	.	-	0	ID=cds-WP_000457334.1;Parent=gene-AC56_RS12645;Dbxref=GenBank:WP_000457334.1;Name=WP_000457334.1;gbkey=CDS;gene=yoaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310547.1;locus_tag=AC56_RS12645;product=YoaH family protein;protein_id=WP_000457334.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	15727	17088	.	+	.	ID=gene-AC56_RS12640;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=AC56_RS12640;old_locus_tag=AC56_2075
NZ_JJLS01000185.1	Protein Homology	CDS	15727	17088	.	+	0	ID=cds-WP_029397541.1;Parent=gene-AC56_RS12640;Dbxref=GenBank:WP_029397541.1;Name=WP_029397541.1;Ontology_term=GO:0009396;gbkey=CDS;gene=pabB;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707310.1;locus_tag=AC56_RS12640;product=aminodeoxychorismate synthase component 1;protein_id=WP_029397541.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	17092	17670	.	+	.	ID=gene-AC56_RS12635;Name=nudL;gbkey=Gene;gene=nudL;gene_biotype=protein_coding;locus_tag=AC56_RS12635;old_locus_tag=AC56_2076
NZ_JJLS01000185.1	Protein Homology	CDS	17092	17670	.	+	0	ID=cds-WP_000456725.1;Parent=gene-AC56_RS12635;Dbxref=GenBank:WP_000456725.1;Name=WP_000456725.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;gene=nudL;go_function=magnesium ion binding|0000287||IEA,coenzyme A diphosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310549.1;locus_tag=AC56_RS12635;product=CoA pyrophosphatase;protein_id=WP_000456725.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	17854	19218	.	+	.	ID=gene-AC56_RS12630;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=AC56_RS12630;old_locus_tag=AC56_2077
NZ_JJLS01000185.1	Protein Homology	CDS	17854	19218	.	+	0	ID=cds-WP_000624298.1;Parent=gene-AC56_RS12630;Dbxref=GenBank:WP_000624298.1;Name=WP_000624298.1;gbkey=CDS;gene=sdaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416328.1;locus_tag=AC56_RS12630;product=L-serine ammonia-lyase;protein_id=WP_000624298.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	pseudogene	19349	20947	.	+	.	ID=gene-AC56_RS0126165;Name=pdeD;gbkey=Gene;gene=pdeD;gene_biotype=pseudogene;locus_tag=AC56_RS0126165;pseudo=true
NZ_JJLS01000185.1	Protein Homology	CDS	19349	20947	.	+	0	ID=cds-AC56_RS0126165;Parent=gene-AC56_RS0126165;Note=internal stop;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;gene=pdeD;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416329.4;locus_tag=AC56_RS0126165;product=EAL domain-containing protein;pseudo=true;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	20951	22507	.	-	.	ID=gene-AC56_RS12625;Name=yoaE;gbkey=Gene;gene=yoaE;gene_biotype=protein_coding;locus_tag=AC56_RS12625;old_locus_tag=AC56_2080
NZ_JJLS01000185.1	Protein Homology	CDS	20951	22507	.	-	0	ID=cds-WP_000394983.1;Parent=gene-AC56_RS12625;Dbxref=GenBank:WP_000394983.1;Name=WP_000394983.1;gbkey=CDS;gene=yoaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310552.1;locus_tag=AC56_RS12625;product=CNNM family cation transport protein YoaE;protein_id=WP_000394983.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	22495	22653	.	-	.	ID=gene-AC56_RS33565;Name=yoaL;gbkey=Gene;gene=yoaL;gene_biotype=protein_coding;locus_tag=AC56_RS33565
NZ_JJLS01000185.1	Protein Homology	CDS	22495	22653	.	-	0	ID=cds-WP_001327808.1;Parent=gene-AC56_RS33565;Dbxref=GenBank:WP_001327808.1;Name=WP_001327808.1;gbkey=CDS;gene=yoaL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518795.2;locus_tag=AC56_RS33565;product=protein YoaL;protein_id=WP_001327808.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	22970	23941	.	+	.	ID=gene-AC56_RS12620;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;locus_tag=AC56_RS12620;old_locus_tag=AC56_2081
NZ_JJLS01000185.1	Protein Homology	CDS	22970	23941	.	+	0	ID=cds-WP_000150543.1;Parent=gene-AC56_RS12620;Dbxref=GenBank:WP_000150543.1;Name=WP_000150543.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=manX;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310554.1;locus_tag=AC56_RS12620;product=PTS mannose transporter subunit IIAB;protein_id=WP_000150543.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	24004	24804	.	+	.	ID=gene-AC56_RS12615;Name=manY;gbkey=Gene;gene=manY;gene_biotype=protein_coding;locus_tag=AC56_RS12615;old_locus_tag=AC56_2082
NZ_JJLS01000185.1	Protein Homology	CDS	24004	24804	.	+	0	ID=cds-WP_000406926.1;Parent=gene-AC56_RS12615;Dbxref=GenBank:WP_000406926.1;Name=WP_000406926.1;gbkey=CDS;gene=manY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910918.1;locus_tag=AC56_RS12615;product=PTS mannose transporter subunit IIC;protein_id=WP_000406926.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	24817	25668	.	+	.	ID=gene-AC56_RS12610;Name=manZ;gbkey=Gene;gene=manZ;gene_biotype=protein_coding;locus_tag=AC56_RS12610;old_locus_tag=AC56_2083
NZ_JJLS01000185.1	Protein Homology	CDS	24817	25668	.	+	0	ID=cds-WP_000228655.1;Parent=gene-AC56_RS12610;Dbxref=GenBank:WP_000228655.1;Name=WP_000228655.1;gbkey=CDS;gene=manZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020804907.1;locus_tag=AC56_RS12610;product=PTS mannose transporter subunit IID;protein_id=WP_000228655.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	25723	26181	.	+	.	ID=gene-AC56_RS12605;Name=yobD;gbkey=Gene;gene=yobD;gene_biotype=protein_coding;locus_tag=AC56_RS12605;old_locus_tag=AC56_2084
NZ_JJLS01000185.1	Protein Homology	CDS	25723	26181	.	+	0	ID=cds-WP_000156255.1;Parent=gene-AC56_RS12605;Dbxref=GenBank:WP_000156255.1;Name=WP_000156255.1;gbkey=CDS;gene=yobD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416334.1;locus_tag=AC56_RS12605;product=DUF986 family protein;protein_id=WP_000156255.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	26610	27176	.	+	.	ID=gene-AC56_RS12600;Name=mntP;gbkey=Gene;gene=mntP;gene_biotype=protein_coding;locus_tag=AC56_RS12600;old_locus_tag=AC56_2085
NZ_JJLS01000185.1	Protein Homology	CDS	26610	27176	.	+	0	ID=cds-WP_001296134.1;Parent=gene-AC56_RS12600;Dbxref=GenBank:WP_001296134.1;Name=WP_001296134.1;gbkey=CDS;gene=mntP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416335.4;locus_tag=AC56_RS12600;product=manganese efflux pump MntP;protein_id=WP_001296134.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	27173	27982	.	-	.	ID=gene-AC56_RS12595;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=protein_coding;locus_tag=AC56_RS12595;old_locus_tag=AC56_2086
NZ_JJLS01000185.1	Protein Homology	CDS	27173	27982	.	-	0	ID=cds-WP_016242188.1;Parent=gene-AC56_RS12595;Dbxref=GenBank:WP_016242188.1;Name=WP_016242188.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmA;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416336.1;locus_tag=AC56_RS12595;product=23S rRNA (guanine(745)-N(1))-methyltransferase;protein_id=WP_016242188.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	28148	28357	.	-	.	ID=gene-AC56_RS12590;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=AC56_RS12590;old_locus_tag=AC56_2087
NZ_JJLS01000185.1	Protein Homology	CDS	28148	28357	.	-	0	ID=cds-WP_001062678.1;Parent=gene-AC56_RS12590;Dbxref=GenBank:WP_001062678.1;Name=WP_001062678.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310560.1;locus_tag=AC56_RS12590;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_001062678.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	28370	28513	.	-	.	ID=gene-AC56_RS12585;Name=yobF;gbkey=Gene;gene=yobF;gene_biotype=protein_coding;locus_tag=AC56_RS12585;old_locus_tag=AC56_2088
NZ_JJLS01000185.1	Protein Homology	CDS	28370	28513	.	-	0	ID=cds-WP_001295496.1;Parent=gene-AC56_RS12585;Dbxref=GenBank:WP_001295496.1;Name=WP_001295496.1;gbkey=CDS;gene=yobF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416338.1;locus_tag=AC56_RS12585;product=DUF2627 domain-containing protein;protein_id=WP_001295496.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	29182	29469	.	-	.	ID=gene-AC56_RS12580;Name=yebO;gbkey=Gene;gene=yebO;gene_biotype=protein_coding;locus_tag=AC56_RS12580;old_locus_tag=AC56_2089
NZ_JJLS01000185.1	Protein Homology	CDS	29182	29469	.	-	0	ID=cds-WP_001006866.1;Parent=gene-AC56_RS12580;Dbxref=GenBank:WP_001006866.1;Name=WP_001006866.1;gbkey=CDS;gene=yebO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416339.1;locus_tag=AC56_RS12580;product=YebO family protein;protein_id=WP_001006866.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	29544	29687	.	-	.	ID=gene-AC56_RS12575;Name=mgrB;gbkey=Gene;gene=mgrB;gene_biotype=protein_coding;locus_tag=AC56_RS12575;old_locus_tag=AC56_2090
NZ_JJLS01000185.1	Protein Homology	CDS	29544	29687	.	-	0	ID=cds-WP_000714550.1;Parent=gene-AC56_RS12575;Dbxref=GenBank:WP_000714550.1;Name=WP_000714550.1;gbkey=CDS;gene=mgrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416340.1;locus_tag=AC56_RS12575;product=PhoP/PhoQ regulator MgrB;protein_id=WP_000714550.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	29846	30085	.	+	.	ID=gene-AC56_RS12570;Name=yobH;gbkey=Gene;gene=yobH;gene_biotype=protein_coding;locus_tag=AC56_RS12570;old_locus_tag=AC56_2091
NZ_JJLS01000185.1	Protein Homology	CDS	29846	30085	.	+	0	ID=cds-WP_001211011.1;Parent=gene-AC56_RS12570;Dbxref=GenBank:WP_001211011.1;Name=WP_001211011.1;gbkey=CDS;gene=yobH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588456.1;locus_tag=AC56_RS12570;product=YobH family protein;protein_id=WP_001211011.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	30228	31019	.	-	.	ID=gene-AC56_RS12565;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=protein_coding;locus_tag=AC56_RS12565;old_locus_tag=AC56_2092
NZ_JJLS01000185.1	Protein Homology	CDS	30228	31019	.	-	0	ID=cds-WP_001262182.1;Parent=gene-AC56_RS12565;Dbxref=GenBank:WP_001262182.1;Name=WP_001262182.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=kdgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310564.1;locus_tag=AC56_RS12565;product=DNA-binding transcriptional regulator KdgR;protein_id=WP_001262182.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	31196	32569	.	+	.	ID=gene-AC56_RS12560;Name=yebQ;gbkey=Gene;gene=yebQ;gene_biotype=protein_coding;locus_tag=AC56_RS12560;old_locus_tag=AC56_2093
NZ_JJLS01000185.1	Protein Homology	CDS	31196	32569	.	+	0	ID=cds-WP_001127216.1;Parent=gene-AC56_RS12560;Dbxref=GenBank:WP_001127216.1;Name=WP_001127216.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yebQ;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416342.4;locus_tag=AC56_RS12560;product=MFS transporter;protein_id=WP_001127216.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	32615	33496	.	-	.	ID=gene-AC56_RS12555;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=AC56_RS12555;old_locus_tag=AC56_2094
NZ_JJLS01000185.1	Protein Homology	CDS	32615	33496	.	-	0	ID=cds-WP_001433082.1;Parent=gene-AC56_RS12555;Dbxref=GenBank:WP_001433082.1;Name=WP_001433082.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229823.1;locus_tag=AC56_RS12555;product=protease HtpX;protein_id=WP_001433082.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	33688	35736	.	-	.	ID=gene-AC56_RS12550;Name=prc;gbkey=Gene;gene=prc;gene_biotype=protein_coding;locus_tag=AC56_RS12550;old_locus_tag=AC56_2095
NZ_JJLS01000185.1	Protein Homology	CDS	33688	35736	.	-	0	ID=cds-WP_001315679.1;Parent=gene-AC56_RS12550;Dbxref=GenBank:WP_001315679.1;Name=WP_001315679.1;Ontology_term=GO:0006508,GO:0005515,GO:0008236;gbkey=CDS;gene=prc;go_function=protein binding|0005515||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310567.1;locus_tag=AC56_RS12550;product=carboxy terminal-processing peptidase;protein_id=WP_001315679.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	35756	36454	.	-	.	ID=gene-AC56_RS12545;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=AC56_RS12545;old_locus_tag=AC56_2096
NZ_JJLS01000185.1	Protein Homology	CDS	35756	36454	.	-	0	ID=cds-WP_000431370.1;Parent=gene-AC56_RS12545;Dbxref=GenBank:WP_000431370.1;Name=WP_000431370.1;Ontology_term=GO:0010608,GO:0003723,GO:0033592,GO:0034057;gbkey=CDS;gene=proQ;go_function=RNA binding|0003723||IEA,RNA strand annealing activity|0033592||IEA,RNA strand-exchange activity|0034057||IEA;go_process=post-transcriptional regulation of gene expression|0010608||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707288.3;locus_tag=AC56_RS12545;product=RNA chaperone ProQ;protein_id=WP_000431370.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	36551	37048	.	-	.	ID=gene-AC56_RS12540;Name=msrC;gbkey=Gene;gene=msrC;gene_biotype=protein_coding;locus_tag=AC56_RS12540;old_locus_tag=AC56_2097
NZ_JJLS01000185.1	Protein Homology	CDS	36551	37048	.	-	0	ID=cds-WP_001043882.1;Parent=gene-AC56_RS12540;Dbxref=GenBank:WP_001043882.1;Name=WP_001043882.1;gbkey=CDS;gene=msrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707287.1;locus_tag=AC56_RS12540;product=L-methionine (R)-S-oxide reductase;protein_id=WP_001043882.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	37178	38461	.	+	.	ID=gene-AC56_RS12535;Name=yebS;gbkey=Gene;gene=yebS;gene_biotype=protein_coding;locus_tag=AC56_RS12535;old_locus_tag=AC56_2098
NZ_JJLS01000185.1	Protein Homology	CDS	37178	38461	.	+	0	ID=cds-WP_032278382.1;Parent=gene-AC56_RS12535;Dbxref=GenBank:WP_032278382.1;Name=WP_032278382.1;gbkey=CDS;gene=yebS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310570.1;locus_tag=AC56_RS12535;product=membrane integrity lipid transport subunit YebS;protein_id=WP_032278382.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	38430	41063	.	+	.	ID=gene-AC56_RS12530;Name=yebT;gbkey=Gene;gene=yebT;gene_biotype=protein_coding;locus_tag=AC56_RS12530;old_locus_tag=AC56_2099
NZ_JJLS01000185.1	Protein Homology	CDS	38430	41063	.	+	0	ID=cds-WP_032278383.1;Parent=gene-AC56_RS12530;Dbxref=GenBank:WP_032278383.1;Name=WP_032278383.1;gbkey=CDS;gene=yebT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416348.2;locus_tag=AC56_RS12530;product=lipid-binding membrane homeostasis protein YebT;protein_id=WP_032278383.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	41143	42582	.	+	.	ID=gene-AC56_RS12525;Name=rsmF;gbkey=Gene;gene=rsmF;gene_biotype=protein_coding;locus_tag=AC56_RS12525;old_locus_tag=AC56_2100
NZ_JJLS01000185.1	Protein Homology	CDS	41143	42582	.	+	0	ID=cds-WP_024176540.1;Parent=gene-AC56_RS12525;Dbxref=GenBank:WP_024176540.1;Name=WP_024176540.1;Ontology_term=GO:0001510,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmF;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416349.2;locus_tag=AC56_RS12525;product=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;protein_id=WP_024176540.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	42700	42936	.	+	.	ID=gene-AC56_RS12520;Name=yebV;gbkey=Gene;gene=yebV;gene_biotype=protein_coding;locus_tag=AC56_RS12520;old_locus_tag=AC56_2101
NZ_JJLS01000185.1	Protein Homology	CDS	42700	42936	.	+	0	ID=cds-WP_001295499.1;Parent=gene-AC56_RS12520;Dbxref=GenBank:WP_001295499.1;Name=WP_001295499.1;gbkey=CDS;gene=yebV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707284.2;locus_tag=AC56_RS12520;product=YebV family protein;protein_id=WP_001295499.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	43041	43232	.	+	.	ID=gene-AC56_RS12515;Name=yebW;gbkey=Gene;gene=yebW;gene_biotype=protein_coding;locus_tag=AC56_RS12515;old_locus_tag=AC56_2102
NZ_JJLS01000185.1	Protein Homology	CDS	43041	43232	.	+	0	ID=cds-WP_001313035.1;Parent=gene-AC56_RS12515;Dbxref=GenBank:WP_001313035.1;Name=WP_001313035.1;gbkey=CDS;gene=yebW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416351.2;locus_tag=AC56_RS12515;product=YebW family protein;protein_id=WP_001313035.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	43233	43889	.	-	.	ID=gene-AC56_RS12510;Name=pphA;gbkey=Gene;gene=pphA;gene_biotype=protein_coding;locus_tag=AC56_RS12510;old_locus_tag=AC56_2103
NZ_JJLS01000185.1	Protein Homology	CDS	43233	43889	.	-	0	ID=cds-WP_032278384.1;Parent=gene-AC56_RS12510;Dbxref=GenBank:WP_032278384.1;Name=WP_032278384.1;Ontology_term=GO:0016787;gbkey=CDS;gene=pphA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310575.2;locus_tag=AC56_RS12510;product=protein-serine/threonine phosphatase;protein_id=WP_032278384.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	44285	44626	.	-	.	ID=gene-AC56_RS12505;Name=yebY;gbkey=Gene;gene=yebY;gene_biotype=protein_coding;locus_tag=AC56_RS12505;old_locus_tag=AC56_2104
NZ_JJLS01000185.1	Protein Homology	CDS	44285	44626	.	-	0	ID=cds-WP_000976472.1;Parent=gene-AC56_RS12505;Dbxref=GenBank:WP_000976472.1;Name=WP_000976472.1;gbkey=CDS;gene=yebY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310576.1;locus_tag=AC56_RS12505;product=YebY family protein;protein_id=WP_000976472.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	44639	45511	.	-	.	ID=gene-AC56_RS12500;Name=copD;gbkey=Gene;gene=copD;gene_biotype=protein_coding;locus_tag=AC56_RS12500;old_locus_tag=AC56_2105
NZ_JJLS01000185.1	Protein Homology	CDS	44639	45511	.	-	0	ID=cds-WP_000879286.1;Parent=gene-AC56_RS12500;Dbxref=GenBank:WP_000879286.1;Name=WP_000879286.1;Ontology_term=GO:0006825,GO:0016020;gbkey=CDS;gene=copD;go_component=membrane|0016020||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310577.1;locus_tag=AC56_RS12500;product=copper homeostasis membrane protein CopD;protein_id=WP_000879286.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	45515	45889	.	-	.	ID=gene-AC56_RS12495;Name=yobA;gbkey=Gene;gene=yobA;gene_biotype=protein_coding;locus_tag=AC56_RS12495;old_locus_tag=AC56_2106
NZ_JJLS01000185.1	Protein Homology	CDS	45515	45889	.	-	0	ID=cds-WP_000168738.1;Parent=gene-AC56_RS12495;Dbxref=GenBank:WP_000168738.1;Name=WP_000168738.1;Ontology_term=GO:0006825,GO:0046688,GO:0005507;gbkey=CDS;gene=yobA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416355.1;locus_tag=AC56_RS12495;product=CopC domain-containing protein YobA;protein_id=WP_000168738.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	46028	46258	.	+	.	ID=gene-AC56_RS12490;Name=holE;gbkey=Gene;gene=holE;gene_biotype=protein_coding;locus_tag=AC56_RS12490;old_locus_tag=AC56_2107
NZ_JJLS01000185.1	Protein Homology	CDS	46028	46258	.	+	0	ID=cds-WP_000916763.1;Parent=gene-AC56_RS12490;Dbxref=GenBank:WP_000916763.1;Name=WP_000916763.1;gbkey=CDS;gene=holE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310579.1;locus_tag=AC56_RS12490;product=DNA polymerase III subunit theta;protein_id=WP_000916763.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	46360	47016	.	+	.	ID=gene-AC56_RS12485;Name=yobB;gbkey=Gene;gene=yobB;gene_biotype=protein_coding;locus_tag=AC56_RS12485;old_locus_tag=AC56_2108
NZ_JJLS01000185.1	Protein Homology	CDS	46360	47016	.	+	0	ID=cds-WP_000011657.1;Parent=gene-AC56_RS12485;Dbxref=GenBank:WP_000011657.1;Name=WP_000011657.1;gbkey=CDS;gene=yobB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416357.1;locus_tag=AC56_RS12485;product=carbon-nitrogen hydrolase family protein YobB;protein_id=WP_000011657.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	47040	47702	.	+	.	ID=gene-AC56_RS12480;Name=exoX;gbkey=Gene;gene=exoX;gene_biotype=protein_coding;locus_tag=AC56_RS12480;old_locus_tag=AC56_2109
NZ_JJLS01000185.1	Protein Homology	CDS	47040	47702	.	+	0	ID=cds-WP_000944256.1;Parent=gene-AC56_RS12480;Dbxref=GenBank:WP_000944256.1;Name=WP_000944256.1;gbkey=CDS;gene=exoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416358.1;locus_tag=AC56_RS12480;product=exodeoxyribonuclease X;protein_id=WP_000944256.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	47699	49759	.	-	.	ID=gene-AC56_RS12475;Name=ptrB;gbkey=Gene;gene=ptrB;gene_biotype=protein_coding;locus_tag=AC56_RS12475;old_locus_tag=AC56_2110
NZ_JJLS01000185.1	Protein Homology	CDS	47699	49759	.	-	0	ID=cds-WP_000936951.1;Parent=gene-AC56_RS12475;Dbxref=GenBank:WP_000936951.1;Name=WP_000936951.1;gbkey=CDS;gene=ptrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416359.1;locus_tag=AC56_RS12475;product=oligopeptidase B;protein_id=WP_000936951.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	49968	50627	.	-	.	ID=gene-AC56_RS12470;Name=yebE;gbkey=Gene;gene=yebE;gene_biotype=protein_coding;locus_tag=AC56_RS12470;old_locus_tag=AC56_2111
NZ_JJLS01000185.1	Protein Homology	CDS	49968	50627	.	-	0	ID=cds-WP_000024745.1;Parent=gene-AC56_RS12470;Dbxref=GenBank:WP_000024745.1;Name=WP_000024745.1;gbkey=CDS;gene=yebE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310583.1;locus_tag=AC56_RS12470;product=tellurite resistance TerB family protein;protein_id=WP_000024745.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	50954	51310	.	-	.	ID=gene-AC56_RS12465;Name=yebF;gbkey=Gene;gene=yebF;gene_biotype=protein_coding;locus_tag=AC56_RS12465;old_locus_tag=AC56_2112
NZ_JJLS01000185.1	Protein Homology	CDS	50954	51310	.	-	0	ID=cds-WP_001295500.1;Parent=gene-AC56_RS12465;Dbxref=GenBank:WP_001295500.1;Name=WP_001295500.1;gbkey=CDS;gene=yebF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310584.2;locus_tag=AC56_RS12465;product=protein YebF;protein_id=WP_001295500.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	51377	51667	.	-	.	ID=gene-AC56_RS12460;Name=yebG;gbkey=Gene;gene=yebG;gene_biotype=protein_coding;locus_tag=AC56_RS12460;old_locus_tag=AC56_2113
NZ_JJLS01000185.1	Protein Homology	CDS	51377	51667	.	-	0	ID=cds-WP_000257738.1;Parent=gene-AC56_RS12460;Dbxref=GenBank:WP_000257738.1;Name=WP_000257738.1;gbkey=CDS;gene=yebG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310585.1;locus_tag=AC56_RS12460;product=DNA damage-inducible protein YebG;protein_id=WP_000257738.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	51801	52979	.	+	.	ID=gene-AC56_RS12455;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=AC56_RS12455;old_locus_tag=AC56_2114
NZ_JJLS01000185.1	Protein Homology	CDS	51801	52979	.	+	0	ID=cds-WP_032278388.1;Parent=gene-AC56_RS12455;Dbxref=GenBank:WP_032278388.1;Name=WP_032278388.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416363.1;locus_tag=AC56_RS12455;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_032278388.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	53035	53676	.	-	.	ID=gene-AC56_RS12450;Name=kdgA;gbkey=Gene;gene=kdgA;gene_biotype=protein_coding;gene_synonym=eda;locus_tag=AC56_RS12450;old_locus_tag=AC56_2115
NZ_JJLS01000185.1	Protein Homology	CDS	53035	53676	.	-	0	ID=cds-WP_000800512.1;Parent=gene-AC56_RS12450;Dbxref=GenBank:WP_000800512.1;Name=WP_000800512.1;gbkey=CDS;gene=kdgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310587.1;locus_tag=AC56_RS12450;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_000800512.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	53713	55524	.	-	.	ID=gene-AC56_RS12445;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=AC56_RS12445;old_locus_tag=AC56_2116
NZ_JJLS01000185.1	Protein Homology	CDS	53713	55524	.	-	0	ID=cds-WP_001069467.1;Parent=gene-AC56_RS12445;Dbxref=GenBank:WP_001069467.1;Name=WP_001069467.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310588.1;locus_tag=AC56_RS12445;product=phosphogluconate dehydratase;protein_id=WP_001069467.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	55759	57234	.	-	.	ID=gene-AC56_RS12440;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=AC56_RS12440;old_locus_tag=AC56_2117
NZ_JJLS01000185.1	Protein Homology	CDS	55759	57234	.	-	0	ID=cds-WP_000301727.1;Parent=gene-AC56_RS12440;Dbxref=GenBank:WP_000301727.1;Name=WP_000301727.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120712.1;locus_tag=AC56_RS12440;product=glucose-6-phosphate dehydrogenase;protein_id=WP_000301727.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	57572	58441	.	+	.	ID=gene-AC56_RS12430;Name=hexR;gbkey=Gene;gene=hexR;gene_biotype=protein_coding;gene_synonym=yebK;locus_tag=AC56_RS12430;old_locus_tag=AC56_2119
NZ_JJLS01000185.1	Protein Homology	CDS	57572	58441	.	+	0	ID=cds-WP_001056706.1;Parent=gene-AC56_RS12430;Dbxref=GenBank:WP_001056706.1;Name=WP_001056706.1;gbkey=CDS;gene=hexR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416367.1;locus_tag=AC56_RS12430;product=DNA-binding transcriptional regulator HexR;protein_id=WP_001056706.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	58569	60011	.	+	.	ID=gene-AC56_RS12425;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=AC56_RS12425;old_locus_tag=AC56_2120
NZ_JJLS01000185.1	Protein Homology	CDS	58569	60011	.	+	0	ID=cds-WP_000091148.1;Parent=gene-AC56_RS12425;Dbxref=GenBank:WP_000091148.1;Name=WP_000091148.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120709.1;locus_tag=AC56_RS12425;product=pyruvate kinase;protein_id=WP_000091148.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	60142	61113	.	-	.	ID=gene-AC56_RS12420;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=AC56_RS12420;old_locus_tag=AC56_2121
NZ_JJLS01000185.1	Protein Homology	CDS	60142	61113	.	-	0	ID=cds-WP_016244712.1;Parent=gene-AC56_RS12420;Dbxref=GenBank:WP_016244712.1;Name=WP_016244712.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009103,GO:0016747,GO:0009276,GO:0016020;gbkey=CDS;gene=lpxM;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416369.1;locus_tag=AC56_RS12420;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WP_016244712.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	61233	62555	.	-	.	ID=gene-AC56_RS12415;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=protein_coding;locus_tag=AC56_RS12415;old_locus_tag=AC56_2122
NZ_JJLS01000185.1	Protein Homology	CDS	61233	62555	.	-	0	ID=cds-WP_001184045.1;Parent=gene-AC56_RS12415;Dbxref=GenBank:WP_001184045.1;Name=WP_001184045.1;Ontology_term=GO:0042834;gbkey=CDS;gene=mepM;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707716.1;locus_tag=AC56_RS12415;product=murein DD-endopeptidase MepM;protein_id=WP_001184045.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	62571	63503	.	-	.	ID=gene-AC56_RS12410;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=AC56_RS12410;old_locus_tag=AC56_2123
NZ_JJLS01000185.1	Protein Homology	CDS	62571	63503	.	-	0	ID=cds-WP_001300644.1;Parent=gene-AC56_RS12410;Dbxref=GenBank:WP_001300644.1;Name=WP_001300644.1;Ontology_term=GO:0006829,GO:0046872;gbkey=CDS;gene=znuA;go_function=metal ion binding|0046872||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416371.4;locus_tag=AC56_RS12410;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=WP_001300644.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	63582	64337	.	+	.	ID=gene-AC56_RS12405;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=AC56_RS12405;old_locus_tag=AC56_2124
NZ_JJLS01000185.1	Protein Homology	CDS	63582	64337	.	+	0	ID=cds-WP_000202990.1;Parent=gene-AC56_RS12405;Dbxref=GenBank:WP_000202990.1;Name=WP_000202990.1;Ontology_term=GO:0006829,GO:0005524,GO:0015633;gbkey=CDS;gene=znuC;go_function=ATP binding|0005524||IEA,ABC-type zinc transporter activity|0015633||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310595.1;locus_tag=AC56_RS12405;product=zinc ABC transporter ATP-binding protein ZnuC;protein_id=WP_000202990.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	64334	65119	.	+	.	ID=gene-AC56_RS12400;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=AC56_RS12400;old_locus_tag=AC56_2125
NZ_JJLS01000185.1	Protein Homology	CDS	64334	65119	.	+	0	ID=cds-WP_000571480.1;Parent=gene-AC56_RS12400;Dbxref=GenBank:WP_000571480.1;Name=WP_000571480.1;Ontology_term=GO:0055085,GO:0042626;gbkey=CDS;gene=znuB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416373.1;locus_tag=AC56_RS12400;product=zinc ABC transporter permease subunit ZnuB;protein_id=WP_000571480.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	65460	66470	.	-	.	ID=gene-AC56_RS12395;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=AC56_RS12395;old_locus_tag=AC56_2126
NZ_JJLS01000185.1	Protein Homology	CDS	65460	66470	.	-	0	ID=cds-WP_000568519.1;Parent=gene-AC56_RS12395;Dbxref=GenBank:WP_000568519.1;Name=WP_000568519.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310597.1;locus_tag=AC56_RS12395;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_000568519.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	66479	67090	.	-	.	ID=gene-AC56_RS12390;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=AC56_RS12390;old_locus_tag=AC56_2127
NZ_JJLS01000185.1	Protein Homology	CDS	66479	67090	.	-	0	ID=cds-WP_000580327.1;Parent=gene-AC56_RS12390;Dbxref=GenBank:WP_000580327.1;Name=WP_000580327.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131997.1;locus_tag=AC56_RS12390;product=Holliday junction branch migration protein RuvA;protein_id=WP_000580327.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	67229	67294	.	-	.	ID=gene-AC56_RS31270;Name=yobI;gbkey=Gene;gene=yobI;gene_biotype=protein_coding;locus_tag=AC56_RS31270
NZ_JJLS01000185.1	Protein Homology	CDS	67229	67294	.	-	0	ID=cds-WP_072094247.1;Parent=gene-AC56_RS31270;Dbxref=GenBank:WP_072094247.1;Name=WP_072094247.1;gbkey=CDS;gene=yobI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791244.1;locus_tag=AC56_RS31270;product=stress response small protein YobI;protein_id=WP_072094247.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	67365	67967	.	+	.	ID=gene-AC56_RS12385;Name=yebB;gbkey=Gene;gene=yebB;gene_biotype=protein_coding;locus_tag=AC56_RS12385;old_locus_tag=AC56_2129
NZ_JJLS01000185.1	Protein Homology	CDS	67365	67967	.	+	0	ID=cds-WP_001024904.1;Parent=gene-AC56_RS12385;Dbxref=GenBank:WP_001024904.1;Name=WP_001024904.1;gbkey=CDS;gene=yebB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416376.2;locus_tag=AC56_RS12385;product=YebB family permuted papain-like enzyme;protein_id=WP_001024904.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	67969	68490	.	-	.	ID=gene-AC56_RS12380;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=AC56_RS12380;old_locus_tag=AC56_2130
NZ_JJLS01000185.1	Protein Homology	CDS	67969	68490	.	-	0	ID=cds-WP_001295503.1;Parent=gene-AC56_RS12380;Dbxref=GenBank:WP_001295503.1;Name=WP_001295503.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005068993.1;locus_tag=AC56_RS12380;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_001295503.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	68525	69265	.	-	.	ID=gene-AC56_RS12375;Name=yebC;gbkey=Gene;gene=yebC;gene_biotype=protein_coding;locus_tag=AC56_RS12375;old_locus_tag=AC56_2131
NZ_JJLS01000185.1	Protein Homology	CDS	68525	69265	.	-	0	ID=cds-WP_000907234.1;Parent=gene-AC56_RS12375;Dbxref=GenBank:WP_000907234.1;Name=WP_000907234.1;gbkey=CDS;gene=yebC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907250.1;locus_tag=AC56_RS12375;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000907234.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	69294	69746	.	-	.	ID=gene-AC56_RS12370;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=AC56_RS12370;old_locus_tag=AC56_2132
NZ_JJLS01000185.1	Protein Homology	CDS	69294	69746	.	-	0	ID=cds-WP_001300367.1;Parent=gene-AC56_RS12370;Dbxref=GenBank:WP_001300367.1;Name=WP_001300367.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416379.1;locus_tag=AC56_RS12370;product=dihydroneopterin triphosphate diphosphatase;protein_id=WP_001300367.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	69864	71636	.	-	.	ID=gene-AC56_RS12365;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=AC56_RS12365;old_locus_tag=AC56_2133
NZ_JJLS01000185.1	Protein Homology	CDS	69864	71636	.	-	0	ID=cds-WP_001258678.1;Parent=gene-AC56_RS12365;Dbxref=GenBank:WP_001258678.1;Name=WP_001258678.1;Ontology_term=GO:0006422,GO:0004815,GO:0005524,GO:0005737;gbkey=CDS;gene=aspS;go_component=cytoplasm|0005737||IEA;go_function=aspartate-tRNA ligase activity|0004815||IEA,ATP binding|0005524||IEA;go_process=aspartyl-tRNA aminoacylation|0006422||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416380.1;locus_tag=AC56_RS12365;product=aspartate--tRNA ligase;protein_id=WP_001258678.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	71946	72512	.	+	.	ID=gene-AC56_RS12360;Name=yecD;gbkey=Gene;gene=yecD;gene_biotype=protein_coding;locus_tag=AC56_RS12360;old_locus_tag=AC56_2134
NZ_JJLS01000185.1	Protein Homology	CDS	71946	72512	.	+	0	ID=cds-WP_000891621.1;Parent=gene-AC56_RS12360;Dbxref=GenBank:WP_000891621.1;Name=WP_000891621.1;gbkey=CDS;gene=yecD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416381.2;locus_tag=AC56_RS12360;product=hydrolase;protein_id=WP_000891621.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	72509	73327	.	+	.	ID=gene-AC56_RS12355;Name=yecE;gbkey=Gene;gene=yecE;gene_biotype=protein_coding;locus_tag=AC56_RS12355;old_locus_tag=AC56_2135
NZ_JJLS01000185.1	Protein Homology	CDS	72509	73327	.	+	0	ID=cds-WP_000639274.1;Parent=gene-AC56_RS12355;Dbxref=GenBank:WP_000639274.1;Name=WP_000639274.1;gbkey=CDS;gene=yecE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416382.1;locus_tag=AC56_RS12355;product=DUF72 domain-containing protein;protein_id=WP_000639274.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	73380	73775	.	+	.	ID=gene-AC56_RS12350;Name=yecN;gbkey=Gene;gene=yecN;gene_biotype=protein_coding;locus_tag=AC56_RS12350;old_locus_tag=AC56_2136
NZ_JJLS01000185.1	Protein Homology	CDS	73380	73775	.	+	0	ID=cds-WP_000252980.1;Parent=gene-AC56_RS12350;Dbxref=GenBank:WP_000252980.1;Name=WP_000252980.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yecN;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310606.2;locus_tag=AC56_RS12350;product=MAPEG family protein;protein_id=WP_000252980.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	73816	74559	.	+	.	ID=gene-AC56_RS12345;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=AC56_RS12345;old_locus_tag=AC56_2137
NZ_JJLS01000185.1	Protein Homology	CDS	73816	74559	.	+	0	ID=cds-WP_000019588.1;Parent=gene-AC56_RS12345;Dbxref=GenBank:WP_000019588.1;Name=WP_000019588.1;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310607.1;locus_tag=AC56_RS12345;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=WP_000019588.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	74556	75527	.	+	.	ID=gene-AC56_RS12340;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=AC56_RS12340;old_locus_tag=AC56_2138
NZ_JJLS01000185.1	Protein Homology	CDS	74556	75527	.	+	0	ID=cds-WP_032278390.1;Parent=gene-AC56_RS12340;Dbxref=GenBank:WP_032278390.1;Name=WP_032278390.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310608.1;locus_tag=AC56_RS12340;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=WP_032278390.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	pseudogene	75692	78121	.	-	.	ID=gene-AC56_RS0126195;Name=torZ;gbkey=Gene;gene=torZ;gene_biotype=pseudogene;locus_tag=AC56_RS0126195;pseudo=true
NZ_JJLS01000185.1	Protein Homology	CDS	75692	78121	.	-	0	ID=cds-AC56_RS0126195;Parent=gene-AC56_RS0126195;Note=internal stop;gbkey=CDS;gene=torZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310609.2;locus_tag=AC56_RS0126195;product=trimethylamine N-oxide reductase TorZ;pseudo=true;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	78146	79246	.	-	.	ID=gene-AC56_RS12335;Name=torY;gbkey=Gene;gene=torY;gene_biotype=protein_coding;locus_tag=AC56_RS12335;old_locus_tag=AC56_2141
NZ_JJLS01000185.1	Protein Homology	CDS	78146	79246	.	-	0	ID=cds-WP_032278391.1;Parent=gene-AC56_RS12335;Dbxref=GenBank:WP_032278391.1;Name=WP_032278391.1;gbkey=CDS;gene=torY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707761.2;locus_tag=AC56_RS12335;product=NapC/NirT family cytochrome c;protein_id=WP_032278391.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	79634	80380	.	-	.	ID=gene-AC56_RS12330;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=AC56_RS12330;old_locus_tag=AC56_2142
NZ_JJLS01000185.1	Protein Homology	CDS	79634	80380	.	-	0	ID=cds-WP_001185727.1;Parent=gene-AC56_RS12330;Dbxref=GenBank:WP_001185727.1;Name=WP_001185727.1;Ontology_term=GO:0055070,GO:0005507;gbkey=CDS;gene=cutC;go_function=copper ion binding|0005507||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310611.2;locus_tag=AC56_RS12330;product=copper homeostasis protein CutC;protein_id=WP_001185727.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	80394	80960	.	-	.	ID=gene-AC56_RS12325;Name=yecM;gbkey=Gene;gene=yecM;gene_biotype=protein_coding;locus_tag=AC56_RS12325;old_locus_tag=AC56_2143
NZ_JJLS01000185.1	Protein Homology	CDS	80394	80960	.	-	0	ID=cds-WP_001295504.1;Parent=gene-AC56_RS12325;Dbxref=GenBank:WP_001295504.1;Name=WP_001295504.1;gbkey=CDS;gene=yecM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310612.2;locus_tag=AC56_RS12325;product=VOC family protein;protein_id=WP_001295504.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	81176	82909	.	+	.	ID=gene-AC56_RS12320;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=AC56_RS12320;old_locus_tag=AC56_2144
NZ_JJLS01000185.1	Protein Homology	CDS	81176	82909	.	+	0	ID=cds-WP_001025322.1;Parent=gene-AC56_RS12320;Dbxref=GenBank:WP_001025322.1;Name=WP_001025322.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025321.1;locus_tag=AC56_RS12320;product=arginine--tRNA ligase;protein_id=WP_001025322.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	82951	82995	.	-	.	ID=gene-AC56_RS33320;Name=yecV;gbkey=Gene;gene=yecV;gene_biotype=protein_coding;locus_tag=AC56_RS33320
NZ_JJLS01000185.1	Protein Homology	CDS	82951	82995	.	-	0	ID=cds-WP_211180499.1;Parent=gene-AC56_RS33320;Dbxref=GenBank:WP_211180499.1;Name=WP_211180499.1;gbkey=CDS;gene=yecV;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051188.1;locus_tag=AC56_RS33320;product=protein YecV;protein_id=WP_211180499.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	83086	83574	.	+	.	ID=gene-AC56_RS12315;Name=yecT;gbkey=Gene;gene=yecT;gene_biotype=protein_coding;locus_tag=AC56_RS12315;old_locus_tag=AC56_2145
NZ_JJLS01000185.1	Protein Homology	CDS	83086	83574	.	+	0	ID=cds-WP_001300831.1;Parent=gene-AC56_RS12315;Dbxref=GenBank:WP_001300831.1;Name=WP_001300831.1;gbkey=CDS;gene=yecT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310614.1;locus_tag=AC56_RS12315;product=lysozyme inhibitor LprI family protein;protein_id=WP_001300831.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	gene	83694	84086	.	-	.	ID=gene-AC56_RS0126200;Name=flhE;gbkey=Gene;gene=flhE;gene_biotype=protein_coding;locus_tag=AC56_RS0126200
NZ_JJLS01000185.1	Protein Homology	CDS	83694	84086	.	-	0	ID=cds-WP_001259583.1;Parent=gene-AC56_RS0126200;Dbxref=GenBank:WP_001259583.1;Name=WP_001259583.1;Ontology_term=GO:0044781;gbkey=CDS;gene=flhE;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416392.1;locus_tag=AC56_RS0126200;product=flagellar protein FlhE;protein_id=WP_001259583.1;transl_table=11
NZ_JJLS01000185.1	RefSeq	pseudogene	84086	84313	.	-	.	ID=gene-AC56_RS29485;Name=AC56_RS29485;end_range=84313,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS29485;old_locus_tag=AC56_2147;partial=true;pseudo=true
NZ_JJLS01000185.1	Protein Homology	CDS	84086	84313	.	-	0	ID=cds-AC56_RS29485;Parent=gene-AC56_RS29485;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009306,GO:0016020;end_range=84313,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310616.1;locus_tag=AC56_RS29485;partial=true;product=FHIPEP family type III secretion protein;pseudo=true;transl_table=11
NZ_JJLS01000185.1	RefSeq	pseudogene	84370	84797	.	+	.	ID=gene-AC56_RS12310;Name=AC56_RS12310;end_range=84797,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS12310;old_locus_tag=AC56_2148;partial=true;pseudo=true
NZ_JJLS01000185.1	Protein Homology	CDS	84370	84797	.	+	0	ID=cds-AC56_RS12310;Parent=gene-AC56_RS12310;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=84797,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS12310;partial=true;product=IS4 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000186.1 1 23570
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000186.1	RefSeq	region	1	23570	.	+	.	ID=NZ_JJLS01000186.1:1..23570;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000186.1	RefSeq	gene	1	961	.	+	.	ID=gene-AC56_RS12305;Name=AC56_RS12305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS12305;old_locus_tag=AC56_2149;partial=true;start_range=.,1
NZ_JJLS01000186.1	Protein Homology	CDS	1	961	.	+	1	ID=cds-WP_032282478.1-9;Parent=gene-AC56_RS12305;Dbxref=GenBank:WP_032282478.1;Name=WP_032282478.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS12305;partial=true;product=IS4-like element IS421 family transposase;protein_id=WP_032282478.1;start_range=.,1;transl_table=11
NZ_JJLS01000186.1	RefSeq	pseudogene	1133	2992	.	-	.	ID=gene-AC56_RS12300;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=pseudogene;locus_tag=AC56_RS12300;old_locus_tag=AC56_2150;partial=true;pseudo=true;start_range=.,1133
NZ_JJLS01000186.1	Protein Homology	CDS	1133	2992	.	-	0	ID=cds-AC56_RS12300;Parent=gene-AC56_RS12300;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=flhA;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416393.1;locus_tag=AC56_RS12300;partial=true;product=flagellar biosynthesis protein FlhA;pseudo=true;start_range=.,1133;transl_table=11
NZ_JJLS01000186.1	RefSeq	gene	2985	4133	.	-	.	ID=gene-AC56_RS12295;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=AC56_RS12295;old_locus_tag=AC56_2151
NZ_JJLS01000186.1	Protein Homology	CDS	2985	4133	.	-	0	ID=cds-WP_001278936.1;Parent=gene-AC56_RS12295;Dbxref=GenBank:WP_001278936.1;Name=WP_001278936.1;Ontology_term=GO:0015031,GO:0044780,GO:0016020;gbkey=CDS;gene=flhB;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416394.1;locus_tag=AC56_RS12295;product=flagellar biosynthesis protein FlhB;protein_id=WP_001278936.1;transl_table=11
NZ_JJLS01000186.1	RefSeq	gene	4335	4979	.	-	.	ID=gene-AC56_RS12290;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=protein_coding;locus_tag=AC56_RS12290;old_locus_tag=AC56_2153
NZ_JJLS01000186.1	Protein Homology	CDS	4335	4979	.	-	0	ID=cds-WP_000983609.1;Parent=gene-AC56_RS12290;Dbxref=GenBank:WP_000983609.1;Name=WP_000983609.1;Ontology_term=GO:0050920,GO:0003824;gbkey=CDS;gene=cheZ;go_function=catalytic activity|0003824||IEA;go_process=regulation of chemotaxis|0050920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416395.1;locus_tag=AC56_RS12290;product=protein phosphatase CheZ;protein_id=WP_000983609.1;transl_table=11
NZ_JJLS01000186.1	RefSeq	gene	4990	5379	.	-	.	ID=gene-AC56_RS12285;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=AC56_RS12285;old_locus_tag=AC56_2154
NZ_JJLS01000186.1	Protein Homology	CDS	4990	5379	.	-	0	ID=cds-WP_000763867.1;Parent=gene-AC56_RS12285;Dbxref=GenBank:WP_000763867.1;Name=WP_000763867.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210873.1;locus_tag=AC56_RS12285;product=chemotaxis response regulator CheY;protein_id=WP_000763867.1;transl_table=11
NZ_JJLS01000186.1	RefSeq	gene	5394	6443	.	-	.	ID=gene-AC56_RS12280;Name=cheB;gbkey=Gene;gene=cheB;gene_biotype=protein_coding;locus_tag=AC56_RS12280;old_locus_tag=AC56_2155
NZ_JJLS01000186.1	Protein Homology	CDS	5394	6443	.	-	0	ID=cds-WP_000036371.1;Parent=gene-AC56_RS12280;Dbxref=GenBank:WP_000036371.1;Name=WP_000036371.1;gbkey=CDS;gene=cheB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036372.1;locus_tag=AC56_RS12280;product=protein-glutamate methylesterase/protein glutamine deamidase;protein_id=WP_000036371.1;transl_table=11
NZ_JJLS01000186.1	RefSeq	gene	6446	7306	.	-	.	ID=gene-AC56_RS12275;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;locus_tag=AC56_RS12275;old_locus_tag=AC56_2156
NZ_JJLS01000186.1	Protein Homology	CDS	6446	7306	.	-	0	ID=cds-WP_021564439.1;Parent=gene-AC56_RS12275;Dbxref=GenBank:WP_021564439.1;Name=WP_021564439.1;Ontology_term=GO:0008757;gbkey=CDS;gene=cheR;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416398.1;locus_tag=AC56_RS12275;product=protein-glutamate O-methyltransferase CheR;protein_id=WP_021564439.1;transl_table=11
NZ_JJLS01000186.1	RefSeq	gene	7325	8926	.	-	.	ID=gene-AC56_RS12270;Name=tap;gbkey=Gene;gene=tap;gene_biotype=protein_coding;locus_tag=AC56_RS12270;old_locus_tag=AC56_2157
NZ_JJLS01000186.1	Protein Homology	CDS	7325	8926	.	-	0	ID=cds-WP_000483239.1;Parent=gene-AC56_RS12270;Dbxref=GenBank:WP_000483239.1;Name=WP_000483239.1;gbkey=CDS;gene=tap;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416399.1;locus_tag=AC56_RS12270;product=methyl-accepting chemotaxis protein IV;protein_id=WP_000483239.1;transl_table=11
NZ_JJLS01000186.1	RefSeq	gene	8972	10633	.	-	.	ID=gene-AC56_RS12265;Name=tar;gbkey=Gene;gene=tar;gene_biotype=protein_coding;locus_tag=AC56_RS12265;old_locus_tag=AC56_2158
NZ_JJLS01000186.1	Protein Homology	CDS	8972	10633	.	-	0	ID=cds-WP_001297437.1;Parent=gene-AC56_RS12265;Dbxref=GenBank:WP_001297437.1;Name=WP_001297437.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tar;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416400.1;locus_tag=AC56_RS12265;product=methyl-accepting chemotaxis protein II;protein_id=WP_001297437.1;transl_table=11
NZ_JJLS01000186.1	RefSeq	gene	10778	11281	.	-	.	ID=gene-AC56_RS12260;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=AC56_RS12260;old_locus_tag=AC56_2159
NZ_JJLS01000186.1	Protein Homology	CDS	10778	11281	.	-	0	ID=cds-WP_000147302.1;Parent=gene-AC56_RS12260;Dbxref=GenBank:WP_000147302.1;Name=WP_000147302.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310624.1;locus_tag=AC56_RS12260;product=chemotaxis protein CheW;protein_id=WP_000147302.1;transl_table=11
NZ_JJLS01000186.1	RefSeq	gene	11302	13266	.	-	.	ID=gene-AC56_RS12255;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=AC56_RS12255;old_locus_tag=AC56_2160
NZ_JJLS01000186.1	Protein Homology	CDS	11302	13266	.	-	0	ID=cds-WP_077746196.1;Parent=gene-AC56_RS12255;Dbxref=GenBank:WP_077746196.1;Name=WP_077746196.1;Ontology_term=GO:0000160,GO:0006935,GO:0016310,GO:0000155;gbkey=CDS;gene=cheA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010283911.1;locus_tag=AC56_RS12255;product=chemotaxis protein CheA;protein_id=WP_077746196.1;transl_table=11
NZ_JJLS01000186.1	RefSeq	gene	13271	14197	.	-	.	ID=gene-AC56_RS12250;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=AC56_RS12250;old_locus_tag=AC56_2161
NZ_JJLS01000186.1	Protein Homology	CDS	13271	14197	.	-	0	ID=cds-WP_000795630.1;Parent=gene-AC56_RS12250;Dbxref=GenBank:WP_000795630.1;Name=WP_000795630.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310626.1;locus_tag=AC56_RS12250;product=flagellar motor protein MotB;protein_id=WP_000795630.1;transl_table=11
NZ_JJLS01000186.1	RefSeq	gene	14194	15081	.	-	.	ID=gene-AC56_RS12245;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=AC56_RS12245;old_locus_tag=AC56_2162
NZ_JJLS01000186.1	Protein Homology	CDS	14194	15081	.	-	0	ID=cds-WP_000906340.1;Parent=gene-AC56_RS12245;Dbxref=GenBank:WP_000906340.1;Name=WP_000906340.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416404.1;locus_tag=AC56_RS12245;product=flagellar motor stator protein MotA;protein_id=WP_000906340.1;transl_table=11
NZ_JJLS01000186.1	RefSeq	gene	15208	15786	.	-	.	ID=gene-AC56_RS12240;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=AC56_RS12240;old_locus_tag=AC56_2163
NZ_JJLS01000186.1	Protein Homology	CDS	15208	15786	.	-	0	ID=cds-WP_001291603.1;Parent=gene-AC56_RS12240;Dbxref=GenBank:WP_001291603.1;Name=WP_001291603.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhC;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310628.1;locus_tag=AC56_RS12240;product=flagellar transcriptional regulator FlhC;protein_id=WP_001291603.1;transl_table=11
NZ_JJLS01000186.1	RefSeq	gene	15789	16139	.	-	.	ID=gene-AC56_RS12235;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=AC56_RS12235;old_locus_tag=AC56_2164
NZ_JJLS01000186.1	Protein Homology	CDS	15789	16139	.	-	0	ID=cds-WP_001295647.1;Parent=gene-AC56_RS12235;Dbxref=GenBank:WP_001295647.1;Name=WP_001295647.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhD;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416406.4;locus_tag=AC56_RS12235;product=flagellar transcriptional regulator FlhD;protein_id=WP_001295647.1;transl_table=11
NZ_JJLS01000186.1	RefSeq	gene	16901	17329	.	+	.	ID=gene-AC56_RS12230;Name=uspC;gbkey=Gene;gene=uspC;gene_biotype=protein_coding;locus_tag=AC56_RS12230;old_locus_tag=AC56_2165
NZ_JJLS01000186.1	Protein Homology	CDS	16901	17329	.	+	0	ID=cds-WP_000122426.1;Parent=gene-AC56_RS12230;Dbxref=GenBank:WP_000122426.1;Name=WP_000122426.1;gbkey=CDS;gene=uspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416409.1;locus_tag=AC56_RS12230;product=universal stress protein UspC;protein_id=WP_000122426.1;transl_table=11
NZ_JJLS01000186.1	RefSeq	gene	17336	18760	.	-	.	ID=gene-AC56_RS12225;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=AC56_RS12225;old_locus_tag=AC56_2166
NZ_JJLS01000186.1	Protein Homology	CDS	17336	18760	.	-	0	ID=cds-WP_001295646.1;Parent=gene-AC56_RS12225;Dbxref=GenBank:WP_001295646.1;Name=WP_001295646.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416410.1;locus_tag=AC56_RS12225;product=alpha%2Calpha-trehalose-phosphate synthase;protein_id=WP_001295646.1;transl_table=11
NZ_JJLS01000186.1	RefSeq	gene	18735	19535	.	-	.	ID=gene-AC56_RS12220;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=AC56_RS12220;old_locus_tag=AC56_2167
NZ_JJLS01000186.1	Protein Homology	CDS	18735	19535	.	-	0	ID=cds-WP_001295645.1;Parent=gene-AC56_RS12220;Dbxref=GenBank:WP_001295645.1;Name=WP_001295645.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416411.1;locus_tag=AC56_RS12220;product=trehalose-phosphatase;protein_id=WP_001295645.1;transl_table=11
NZ_JJLS01000186.1	RefSeq	gene	19702	20688	.	-	.	ID=gene-AC56_RS12215;Name=araH;gbkey=Gene;gene=araH;gene_biotype=protein_coding;locus_tag=AC56_RS12215;old_locus_tag=AC56_2168
NZ_JJLS01000186.1	Protein Homology	CDS	19702	20688	.	-	0	ID=cds-WP_000100205.1;Parent=gene-AC56_RS12215;Dbxref=GenBank:WP_000100205.1;Name=WP_000100205.1;gbkey=CDS;gene=araH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026162.2;locus_tag=AC56_RS12215;product=arabinose ABC transporter permease AraH;protein_id=WP_000100205.1;transl_table=11
NZ_JJLS01000186.1	RefSeq	gene	20703	22217	.	-	.	ID=gene-AC56_RS12210;Name=araG;gbkey=Gene;gene=araG;gene_biotype=protein_coding;locus_tag=AC56_RS12210;old_locus_tag=AC56_2169
NZ_JJLS01000186.1	Protein Homology	CDS	20703	22217	.	-	0	ID=cds-WP_001187819.1;Parent=gene-AC56_RS12210;Dbxref=GenBank:WP_001187819.1;Name=WP_001187819.1;gbkey=CDS;gene=araG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127704.1;locus_tag=AC56_RS12210;product=arabinose ABC transporter ATP-binding protein AraG;protein_id=WP_001187819.1;transl_table=11
NZ_JJLS01000186.1	RefSeq	pseudogene	22287	23012	.	-	.	ID=gene-AC56_RS12205;Name=araF;end_range=23012,.;gbkey=Gene;gene=araF;gene_biotype=pseudogene;locus_tag=AC56_RS12205;old_locus_tag=AC56_2170;partial=true;pseudo=true
NZ_JJLS01000186.1	Protein Homology	CDS	22287	23012	.	-	0	ID=cds-AC56_RS12205;Parent=gene-AC56_RS12205;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=23012,.;gbkey=CDS;gene=araF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416414.1;locus_tag=AC56_RS12205;partial=true;product=arabinose ABC transporter substrate-binding protein AraF;pseudo=true;transl_table=11
NZ_JJLS01000186.1	RefSeq	gene	23047	23570	.	+	.	ID=gene-AC56_RS12200;Name=AC56_RS12200;end_range=23570,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS12200;old_locus_tag=AC56_2171;partial=true
NZ_JJLS01000186.1	Protein Homology	CDS	23047	23570	.	+	0	ID=cds-WP_113706242.1;Parent=gene-AC56_RS12200;Dbxref=GenBank:WP_113706242.1;Name=WP_113706242.1;Ontology_term=GO:0004803;end_range=23570,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS12200;partial=true;product=IS5 family transposase;protein_id=WP_113706242.1;transl_table=11
##sequence-region NZ_JJLS01000187.1 1 3514
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000187.1	RefSeq	region	1	3514	.	+	.	ID=NZ_JJLS01000187.1:1..3514;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000187.1	RefSeq	gene	1	428	.	+	.	ID=gene-AC56_RS12195;Name=AC56_RS12195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS12195;old_locus_tag=AC56_2172;partial=true;start_range=.,1
NZ_JJLS01000187.1	Protein Homology	CDS	1	428	.	+	2	ID=cds-WP_032277674.1;Parent=gene-AC56_RS12195;Dbxref=GenBank:WP_032277674.1;Name=WP_032277674.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS12195;partial=true;product=IS1 family transposase;protein_id=WP_032277674.1;start_range=.,1;transl_table=11
NZ_JJLS01000187.1	RefSeq	pseudogene	444	620	.	-	.	ID=gene-AC56_RS29490;Name=AC56_RS29490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS29490;partial=true;pseudo=true;start_range=.,444
NZ_JJLS01000187.1	Protein Homology	CDS	444	620	.	-	0	ID=cds-AC56_RS29490;Parent=gene-AC56_RS29490;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310636.1;locus_tag=AC56_RS29490;partial=true;product=hypothetical protein;pseudo=true;start_range=.,444;transl_table=11
NZ_JJLS01000187.1	RefSeq	gene	1417	1920	.	+	.	ID=gene-AC56_RS12190;Name=ftnB;gbkey=Gene;gene=ftnB;gene_biotype=protein_coding;locus_tag=AC56_RS12190;old_locus_tag=AC56_2173
NZ_JJLS01000187.1	Protein Homology	CDS	1417	1920	.	+	0	ID=cds-WP_000179463.1;Parent=gene-AC56_RS12190;Dbxref=GenBank:WP_000179463.1;Name=WP_000179463.1;gbkey=CDS;gene=ftnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310637.1;locus_tag=AC56_RS12190;product=non-heme ferritin-like protein;protein_id=WP_000179463.1;transl_table=11
NZ_JJLS01000187.1	RefSeq	gene	1999	2250	.	-	.	ID=gene-AC56_RS12185;Name=yecJ;gbkey=Gene;gene=yecJ;gene_biotype=protein_coding;locus_tag=AC56_RS12185;old_locus_tag=AC56_2174
NZ_JJLS01000187.1	Protein Homology	CDS	1999	2250	.	-	0	ID=cds-WP_000082127.1;Parent=gene-AC56_RS12185;Dbxref=GenBank:WP_000082127.1;Name=WP_000082127.1;gbkey=CDS;gene=yecJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416416.2;locus_tag=AC56_RS12185;product=DUF2766 family protein YecJ;protein_id=WP_000082127.1;transl_table=11
NZ_JJLS01000187.1	RefSeq	gene	2365	2451	.	-	.	ID=gene-AC56_RS31275;Name=azuC;gbkey=Gene;gene=azuC;gene_biotype=protein_coding;locus_tag=AC56_RS31275
NZ_JJLS01000187.1	Protein Homology	CDS	2365	2451	.	-	0	ID=cds-WP_010723106.1;Parent=gene-AC56_RS31275;Dbxref=GenBank:WP_010723106.1;Name=WP_010723106.1;gbkey=CDS;gene=azuC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791245.1;locus_tag=AC56_RS31275;product=stress response protein AzuC;protein_id=WP_010723106.1;transl_table=11
NZ_JJLS01000187.1	RefSeq	gene	2714	3037	.	+	.	ID=gene-AC56_RS0126205;Name=yecR;gbkey=Gene;gene=yecR;gene_biotype=protein_coding;locus_tag=AC56_RS0126205
NZ_JJLS01000187.1	Protein Homology	CDS	2714	3037	.	+	0	ID=cds-WP_032278417.1;Parent=gene-AC56_RS0126205;Dbxref=GenBank:WP_032278417.1;Name=WP_032278417.1;gbkey=CDS;gene=yecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416417.1;locus_tag=AC56_RS0126205;product=YecR-like lipofamily protein;protein_id=WP_032278417.1;transl_table=11
NZ_JJLS01000187.1	RefSeq	gene	2988	3203	.	-	.	ID=gene-AC56_RS33755;Name=AC56_RS33755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33755
NZ_JJLS01000187.1	Protein Homology	CDS	2988	3203	.	-	0	ID=cds-WP_349237786.1;Parent=gene-AC56_RS33755;Dbxref=GenBank:WP_349237786.1;Name=WP_349237786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001340336.1;locus_tag=AC56_RS33755;product=hypothetical protein;protein_id=WP_349237786.1;transl_table=11
NZ_JJLS01000187.1	RefSeq	gene	3185	3514	.	-	.	ID=gene-AC56_RS12175;Name=AC56_RS12175;end_range=3514,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS12175;old_locus_tag=AC56_2177;partial=true
NZ_JJLS01000187.1	Protein Homology	CDS	3185	3514	.	-	0	ID=cds-WP_032282723.1;Parent=gene-AC56_RS12175;Dbxref=GenBank:WP_032282723.1;Name=WP_032282723.1;end_range=3514,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS12175;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032282723.1;transl_table=11
##sequence-region NZ_JJLS01000188.1 1 3653
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000188.1	RefSeq	region	1	3653	.	+	.	ID=NZ_JJLS01000188.1:1..3653;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000188.1	RefSeq	pseudogene	1	400	.	-	.	ID=gene-AC56_RS12170;Name=AC56_RS12170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS12170;old_locus_tag=AC56_2178;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000188.1	Protein Homology	CDS	1	400	.	-	0	ID=cds-AC56_RS12170;Parent=gene-AC56_RS12170;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS12170;partial=true;product=IS5-like element ISKpn26 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000188.1	RefSeq	gene	643	1140	.	+	.	ID=gene-AC56_RS12165;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=AC56_RS12165;old_locus_tag=AC56_2180
NZ_JJLS01000188.1	Protein Homology	CDS	643	1140	.	+	0	ID=cds-WP_000917208.1;Parent=gene-AC56_RS12165;Dbxref=GenBank:WP_000917208.1;Name=WP_000917208.1;Ontology_term=GO:0006879,GO:0008199;gbkey=CDS;gene=ftnA;go_function=ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310640.1;locus_tag=AC56_RS12165;product=non-heme ferritin;protein_id=WP_000917208.1;transl_table=11
NZ_JJLS01000188.1	RefSeq	gene	1178	1417	.	-	.	ID=gene-AC56_RS12160;Name=yecH;gbkey=Gene;gene=yecH;gene_biotype=protein_coding;locus_tag=AC56_RS12160;old_locus_tag=AC56_2181
NZ_JJLS01000188.1	Protein Homology	CDS	1178	1417	.	-	0	ID=cds-WP_000377223.1;Parent=gene-AC56_RS12160;Dbxref=GenBank:WP_000377223.1;Name=WP_000377223.1;gbkey=CDS;gene=yecH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310641.1;locus_tag=AC56_RS12160;product=YecH family metal-binding protein;protein_id=WP_000377223.1;transl_table=11
NZ_JJLS01000188.1	RefSeq	gene	1609	2820	.	+	.	ID=gene-AC56_RS12155;Name=tyrP;gbkey=Gene;gene=tyrP;gene_biotype=protein_coding;locus_tag=AC56_RS12155;old_locus_tag=AC56_2182
NZ_JJLS01000188.1	Protein Homology	CDS	1609	2820	.	+	0	ID=cds-WP_000797573.1;Parent=gene-AC56_RS12155;Dbxref=GenBank:WP_000797573.1;Name=WP_000797573.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=tyrP;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310642.1;locus_tag=AC56_RS12155;product=tyrosine transporter TyrP;protein_id=WP_000797573.1;transl_table=11
NZ_JJLS01000188.1	RefSeq	gene	2882	2947	.	-	.	ID=gene-AC56_RS33935;Name=AC56_RS33935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33935
NZ_JJLS01000188.1	Protein Homology	CDS	2882	2947	.	-	0	ID=cds-WP_113706244.1;Parent=gene-AC56_RS33935;Dbxref=GenBank:WP_113706244.1;Name=WP_113706244.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF014825.6;locus_tag=AC56_RS33935;product=SEC-C metal-binding domain-containing protein;protein_id=WP_113706244.1;transl_table=11
NZ_JJLS01000188.1	RefSeq	gene	2944	3641	.	-	.	ID=gene-AC56_RS12150;Name=AC56_RS12150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS12150;old_locus_tag=AC56_2183
NZ_JJLS01000188.1	Protein Homology	CDS	3392	3641	.	-	0	ID=cds-WP_224223467.1-4;Parent=gene-AC56_RS12150;Dbxref=GenBank:WP_224223467.1;Name=WP_224223467.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS12150;product=IS1 family transposase;protein_id=WP_224223467.1;transl_table=11
NZ_JJLS01000188.1	Protein Homology	CDS	2944	3392	.	-	2	ID=cds-WP_224223467.1-4;Parent=gene-AC56_RS12150;Dbxref=GenBank:WP_224223467.1;Name=WP_224223467.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS12150;product=IS1 family transposase;protein_id=WP_224223467.1;transl_table=11
##sequence-region NZ_JJLS01000189.1 1 16163
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000189.1	RefSeq	region	1	16163	.	+	.	ID=NZ_JJLS01000189.1:1..16163;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000189.1	RefSeq	gene	1	227	.	-	.	ID=gene-AC56_RS12145;Name=AC56_RS12145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS12145;old_locus_tag=AC56_2184;partial=true;start_range=.,1
NZ_JJLS01000189.1	Protein Homology	CDS	1	227	.	-	0	ID=cds-WP_032282725.1;Parent=gene-AC56_RS12145;Dbxref=GenBank:WP_032282725.1;Name=WP_032282725.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310679.1;locus_tag=AC56_RS12145;partial=true;product=response regulator;protein_id=WP_032282725.1;start_range=.,1;transl_table=11
NZ_JJLS01000189.1	RefSeq	gene	369	485	.	+	.	ID=gene-AC56_RS33760;Name=AC56_RS33760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33760;old_locus_tag=AC56_2185
NZ_JJLS01000189.1	Protein Homology	CDS	369	485	.	+	0	ID=cds-WP_001302039.1-2;Parent=gene-AC56_RS33760;Dbxref=GenBank:WP_001302039.1;Name=WP_001302039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001302039.1;locus_tag=AC56_RS33760;product=hypothetical protein;protein_id=WP_001302039.1;transl_table=11
NZ_JJLS01000189.1	RefSeq	gene	523	699	.	+	.	ID=gene-AC56_RS32760;Name=yecU;gbkey=Gene;gene=yecU;gene_biotype=protein_coding;locus_tag=AC56_RS32760;old_locus_tag=AC56_2186
NZ_JJLS01000189.1	Protein Homology	CDS	523	699	.	+	0	ID=cds-WP_032278422.1-2;Parent=gene-AC56_RS32760;Dbxref=GenBank:WP_032278422.1;Name=WP_032278422.1;gbkey=CDS;gene=yecU;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518796.1;locus_tag=AC56_RS32760;product=protein YecU;protein_id=WP_032278422.1;transl_table=11
NZ_JJLS01000189.1	RefSeq	gene	686	910	.	+	.	ID=gene-AC56_RS12135;Name=yecF;gbkey=Gene;gene=yecF;gene_biotype=protein_coding;locus_tag=AC56_RS12135;old_locus_tag=AC56_2187
NZ_JJLS01000189.1	Protein Homology	CDS	686	910	.	+	0	ID=cds-WP_000106474.1-2;Parent=gene-AC56_RS12135;Dbxref=GenBank:WP_000106474.1;Name=WP_000106474.1;gbkey=CDS;gene=yecF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416425.1;locus_tag=AC56_RS12135;product=DUF2594 family protein YecF;protein_id=WP_000106474.1;transl_table=11
NZ_JJLS01000189.1	RefSeq	gene	978	1700	.	-	.	ID=gene-AC56_RS12130;Name=sdiA;gbkey=Gene;gene=sdiA;gene_biotype=protein_coding;locus_tag=AC56_RS12130;old_locus_tag=AC56_2188
NZ_JJLS01000189.1	Protein Homology	CDS	978	1700	.	-	0	ID=cds-WP_001154273.1-2;Parent=gene-AC56_RS12130;Dbxref=GenBank:WP_001154273.1;Name=WP_001154273.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=sdiA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310681.1;locus_tag=AC56_RS12130;product=transcriptional regulator SdiA;protein_id=WP_001154273.1;transl_table=11
NZ_JJLS01000189.1	RefSeq	gene	1930	2682	.	-	.	ID=gene-AC56_RS12125;Name=tcyN;gbkey=Gene;gene=tcyN;gene_biotype=protein_coding;locus_tag=AC56_RS12125;old_locus_tag=AC56_2189
NZ_JJLS01000189.1	Protein Homology	CDS	1930	2682	.	-	0	ID=cds-WP_001272994.1;Parent=gene-AC56_RS12125;Dbxref=GenBank:WP_001272994.1;Name=WP_001272994.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=tcyN;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416427.1;locus_tag=AC56_RS12125;product=L-cystine ABC transporter ATP-binding protein TcyN;protein_id=WP_001272994.1;transl_table=11
NZ_JJLS01000189.1	RefSeq	gene	2679	3347	.	-	.	ID=gene-AC56_RS12120;Name=tcyL;gbkey=Gene;gene=tcyL;gene_biotype=protein_coding;locus_tag=AC56_RS12120;old_locus_tag=AC56_2190
NZ_JJLS01000189.1	Protein Homology	CDS	2679	3347	.	-	0	ID=cds-WP_001158220.1;Parent=gene-AC56_RS12120;Dbxref=GenBank:WP_001158220.1;Name=WP_001158220.1;gbkey=CDS;gene=tcyL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416428.1;locus_tag=AC56_RS12120;product=cystine ABC transporter permease;protein_id=WP_001158220.1;transl_table=11
NZ_JJLS01000189.1	RefSeq	gene	3362	4348	.	-	.	ID=gene-AC56_RS12115;Name=dcyD;gbkey=Gene;gene=dcyD;gene_biotype=protein_coding;locus_tag=AC56_RS12115;old_locus_tag=AC56_2191
NZ_JJLS01000189.1	Protein Homology	CDS	3362	4348	.	-	0	ID=cds-WP_001128215.1;Parent=gene-AC56_RS12115;Dbxref=GenBank:WP_001128215.1;Name=WP_001128215.1;Ontology_term=GO:0019148;gbkey=CDS;gene=dcyD;go_function=D-cysteine desulfhydrase activity|0019148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416429.4;locus_tag=AC56_RS12115;product=D-cysteine desulfhydrase;protein_id=WP_001128215.1;transl_table=11
NZ_JJLS01000189.1	RefSeq	gene	4453	5253	.	-	.	ID=gene-AC56_RS12110;Name=tcyJ;gbkey=Gene;gene=tcyJ;gene_biotype=protein_coding;locus_tag=AC56_RS12110;old_locus_tag=AC56_2192
NZ_JJLS01000189.1	Protein Homology	CDS	4453	5253	.	-	0	ID=cds-WP_032278423.1;Parent=gene-AC56_RS12110;Dbxref=GenBank:WP_032278423.1;Name=WP_032278423.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=tcyJ;go_component=membrane|0016020||IEA;go_function=ligand-gated monoatomic ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416430.1;locus_tag=AC56_RS12110;product=cystine ABC transporter substrate-binding protein;protein_id=WP_032278423.1;transl_table=11
NZ_JJLS01000189.1	RefSeq	gene	5341	5892	.	-	.	ID=gene-AC56_RS12105;Name=fliZ;gbkey=Gene;gene=fliZ;gene_biotype=protein_coding;locus_tag=AC56_RS12105;old_locus_tag=AC56_2193
NZ_JJLS01000189.1	Protein Homology	CDS	5341	5892	.	-	0	ID=cds-WP_001300606.1;Parent=gene-AC56_RS12105;Dbxref=GenBank:WP_001300606.1;Name=WP_001300606.1;gbkey=CDS;gene=fliZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310687.2;locus_tag=AC56_RS12105;product=flagella biosynthesis regulatory protein FliZ;protein_id=WP_001300606.1;transl_table=11
NZ_JJLS01000189.1	RefSeq	gene	5938	6657	.	-	.	ID=gene-AC56_RS12100;Name=fliA;gbkey=Gene;gene=fliA;gene_biotype=protein_coding;locus_tag=AC56_RS12100;old_locus_tag=AC56_2194
NZ_JJLS01000189.1	Protein Homology	CDS	5938	6657	.	-	0	ID=cds-WP_001087463.1;Parent=gene-AC56_RS12100;Dbxref=GenBank:WP_001087463.1;Name=WP_001087463.1;gbkey=CDS;gene=fliA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310688.1;locus_tag=AC56_RS12100;product=RNA polymerase sigma factor FliA;protein_id=WP_001087463.1;transl_table=11
NZ_JJLS01000189.1	RefSeq	gene	6977	8689	.	-	.	ID=gene-AC56_RS12095;Name=AC56_RS12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS12095;old_locus_tag=AC56_2196
NZ_JJLS01000189.1	Protein Homology	CDS	6977	8689	.	-	0	ID=cds-WP_000079738.1;Parent=gene-AC56_RS12095;Dbxref=GenBank:WP_000079738.1;Name=WP_000079738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004016342.1;locus_tag=AC56_RS12095;product=FliC/FljB family flagellin;protein_id=WP_000079738.1;transl_table=11
NZ_JJLS01000189.1	RefSeq	gene	8955	10361	.	+	.	ID=gene-AC56_RS12090;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=AC56_RS12090;old_locus_tag=AC56_2197
NZ_JJLS01000189.1	Protein Homology	CDS	8955	10361	.	+	0	ID=cds-WP_000146784.1;Parent=gene-AC56_RS12090;Dbxref=GenBank:WP_000146784.1;Name=WP_000146784.1;Ontology_term=GO:0007155,GO:0009288,GO:0009421;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA,bacterial-type flagellum filament cap|0009421||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416434.1;locus_tag=AC56_RS12090;product=flagellar filament capping protein FliD;protein_id=WP_000146784.1;transl_table=11
NZ_JJLS01000189.1	RefSeq	gene	10386	10796	.	+	.	ID=gene-AC56_RS12085;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=AC56_RS12085;old_locus_tag=AC56_2198
NZ_JJLS01000189.1	Protein Homology	CDS	10386	10796	.	+	0	ID=cds-WP_032278424.1;Parent=gene-AC56_RS12085;Dbxref=GenBank:WP_032278424.1;Name=WP_032278424.1;Ontology_term=GO:0044780;gbkey=CDS;gene=fliS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310691.1;locus_tag=AC56_RS12085;product=flagellar export chaperone FliS;protein_id=WP_032278424.1;transl_table=11
NZ_JJLS01000189.1	RefSeq	gene	10796	11161	.	+	.	ID=gene-AC56_RS12080;Name=fliT;gbkey=Gene;gene=fliT;gene_biotype=protein_coding;locus_tag=AC56_RS12080;old_locus_tag=AC56_2199
NZ_JJLS01000189.1	Protein Homology	CDS	10796	11161	.	+	0	ID=cds-WP_001015033.1;Parent=gene-AC56_RS12080;Dbxref=GenBank:WP_001015033.1;Name=WP_001015033.1;Ontology_term=GO:0006605,GO:0044780,GO:1902209;gbkey=CDS;gene=fliT;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA,negative regulation of bacterial-type flagellum assembly|1902209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310692.1;locus_tag=AC56_RS12080;product=flagella biosynthesis regulatory protein FliT;protein_id=WP_001015033.1;transl_table=11
NZ_JJLS01000189.1	RefSeq	gene	11239	12726	.	+	.	ID=gene-AC56_RS12075;Name=amyA;gbkey=Gene;gene=amyA;gene_biotype=protein_coding;locus_tag=AC56_RS12075;old_locus_tag=AC56_2200
NZ_JJLS01000189.1	Protein Homology	CDS	11239	12726	.	+	0	ID=cds-WP_001245697.1;Parent=gene-AC56_RS12075;Dbxref=GenBank:WP_001245697.1;Name=WP_001245697.1;Ontology_term=GO:0005975,GO:0004553,GO:0005509;gbkey=CDS;gene=amyA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,calcium ion binding|0005509||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416437.1;locus_tag=AC56_RS12075;product=alpha-amylase;protein_id=WP_001245697.1;transl_table=11
NZ_JJLS01000189.1	RefSeq	gene	12760	13173	.	-	.	ID=gene-AC56_RS12070;Name=yedD;gbkey=Gene;gene=yedD;gene_biotype=protein_coding;locus_tag=AC56_RS12070;old_locus_tag=AC56_2201
NZ_JJLS01000189.1	Protein Homology	CDS	12760	13173	.	-	0	ID=cds-WP_001295642.1;Parent=gene-AC56_RS12070;Dbxref=GenBank:WP_001295642.1;Name=WP_001295642.1;gbkey=CDS;gene=yedD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310694.3;locus_tag=AC56_RS12070;product=lipoprotein YedD;protein_id=WP_001295642.1;transl_table=11
NZ_JJLS01000189.1	RefSeq	gene	13360	14565	.	+	.	ID=gene-AC56_RS12065;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=AC56_RS12065;old_locus_tag=AC56_2202
NZ_JJLS01000189.1	Protein Homology	CDS	13360	14565	.	+	0	ID=cds-WP_000118911.1;Parent=gene-AC56_RS12065;Dbxref=GenBank:WP_000118911.1;Name=WP_000118911.1;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416439.1;locus_tag=AC56_RS12065;product=selenium metabolism membrane protein YedE/FdhT;protein_id=WP_000118911.1;transl_table=11
NZ_JJLS01000189.1	RefSeq	gene	14562	14795	.	+	.	ID=gene-AC56_RS12060;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=AC56_RS12060;old_locus_tag=AC56_2203
NZ_JJLS01000189.1	Protein Homology	CDS	14562	14795	.	+	0	ID=cds-WP_000789493.1;Parent=gene-AC56_RS12060;Dbxref=GenBank:WP_000789493.1;Name=WP_000789493.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310696.1;locus_tag=AC56_RS12060;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=WP_000789493.1;transl_table=11
NZ_JJLS01000189.1	RefSeq	gene	14902	15573	.	+	.	ID=gene-AC56_RS12055;Name=yedK;gbkey=Gene;gene=yedK;gene_biotype=protein_coding;locus_tag=AC56_RS12055;old_locus_tag=AC56_2204
NZ_JJLS01000189.1	Protein Homology	CDS	14902	15573	.	+	0	ID=cds-WP_000334611.1;Parent=gene-AC56_RS12055;Dbxref=GenBank:WP_000334611.1;Name=WP_000334611.1;gbkey=CDS;gene=yedK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245363.1;locus_tag=AC56_RS12055;product=SOS response-associated peptidase;protein_id=WP_000334611.1;transl_table=11
NZ_JJLS01000189.1	RefSeq	pseudogene	15737	16163	.	+	.	ID=gene-AC56_RS12050;Name=AC56_RS12050;end_range=16163,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS12050;old_locus_tag=AC56_2205;partial=true;pseudo=true
NZ_JJLS01000189.1	Protein Homology	CDS	15737	16163	.	+	0	ID=cds-AC56_RS12050;Parent=gene-AC56_RS12050;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=16163,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS12050;partial=true;product=IS5-like element ISKpn26 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000190.1 1 17961
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000190.1	RefSeq	region	1	17961	.	+	.	ID=NZ_JJLS01000190.1:1..17961;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000190.1	RefSeq	pseudogene	1	401	.	+	.	ID=gene-AC56_RS0126210;Name=AC56_RS0126210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0126210;old_locus_tag=AC56_2206;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000190.1	Protein Homology	CDS	1	401	.	+	2	ID=cds-AC56_RS0126210;Parent=gene-AC56_RS0126210;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS0126210;partial=true;product=IS5-like element ISKpn26 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000190.1	RefSeq	gene	383	562	.	+	.	ID=gene-AC56_RS33765;Name=AC56_RS33765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33765
NZ_JJLS01000190.1	Protein Homology	CDS	383	562	.	+	0	ID=cds-WP_315747913.1;Parent=gene-AC56_RS33765;Dbxref=GenBank:WP_315747913.1;Name=WP_315747913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001340336.1;locus_tag=AC56_RS33765;product=hypothetical protein;protein_id=WP_315747913.1;transl_table=11
NZ_JJLS01000190.1	RefSeq	gene	596	784	.	-	.	ID=gene-AC56_RS12045;Name=dsrB;gbkey=Gene;gene=dsrB;gene_biotype=protein_coding;locus_tag=AC56_RS12045;old_locus_tag=AC56_2208
NZ_JJLS01000190.1	Protein Homology	CDS	596	784	.	-	0	ID=cds-WP_000867217.1;Parent=gene-AC56_RS12045;Dbxref=GenBank:WP_000867217.1;Name=WP_000867217.1;gbkey=CDS;gene=dsrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310718.1;locus_tag=AC56_RS12045;product=protein DsrB;protein_id=WP_000867217.1;transl_table=11
NZ_JJLS01000190.1	RefSeq	gene	947	1174	.	+	.	ID=gene-AC56_RS12040;Name=yodD;gbkey=Gene;gene=yodD;gene_biotype=protein_coding;locus_tag=AC56_RS12040;old_locus_tag=AC56_2209
NZ_JJLS01000190.1	Protein Homology	CDS	947	1174	.	+	0	ID=cds-WP_000844800.1;Parent=gene-AC56_RS12040;Dbxref=GenBank:WP_000844800.1;Name=WP_000844800.1;gbkey=CDS;gene=yodD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416463.4;locus_tag=AC56_RS12040;product=peroxide/acid resistance protein YodD;protein_id=WP_000844800.1;transl_table=11
NZ_JJLS01000190.1	RefSeq	gene	1472	2287	.	+	.	ID=gene-AC56_RS12035;Name=yedP;gbkey=Gene;gene=yedP;gene_biotype=protein_coding;locus_tag=AC56_RS12035;old_locus_tag=AC56_2210
NZ_JJLS01000190.1	Protein Homology	CDS	1472	2287	.	+	0	ID=cds-WP_000491501.1;Parent=gene-AC56_RS12035;Dbxref=GenBank:WP_000491501.1;Name=WP_000491501.1;Ontology_term=GO:0051479,GO:0050531;gbkey=CDS;gene=yedP;go_function=mannosyl-3-phosphoglycerate phosphatase activity|0050531||IEA;go_process=mannosylglycerate biosynthetic process|0051479||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310720.1;locus_tag=AC56_RS12035;product=mannosyl-3-phosphoglycerate phosphatase-related protein;protein_id=WP_000491501.1;transl_table=11
NZ_JJLS01000190.1	RefSeq	gene	2284	3978	.	-	.	ID=gene-AC56_RS12030;Name=dgcQ;gbkey=Gene;gene=dgcQ;gene_biotype=protein_coding;locus_tag=AC56_RS12030;old_locus_tag=AC56_2211
NZ_JJLS01000190.1	Protein Homology	CDS	2284	3978	.	-	0	ID=cds-WP_077248946.1;Parent=gene-AC56_RS12030;Dbxref=GenBank:WP_077248946.1;Name=WP_077248946.1;gbkey=CDS;gene=dgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416465.2;locus_tag=AC56_RS12030;product=cellulose biosynthesis regulator diguanylate cyclase DgcQ;protein_id=WP_077248946.1;transl_table=11
NZ_JJLS01000190.1	RefSeq	gene	4216	4398	.	-	.	ID=gene-AC56_RS0126215;Name=yodC;gbkey=Gene;gene=yodC;gene_biotype=protein_coding;locus_tag=AC56_RS0126215
NZ_JJLS01000190.1	Protein Homology	CDS	4216	4398	.	-	0	ID=cds-WP_000009306.1;Parent=gene-AC56_RS0126215;Dbxref=GenBank:WP_000009306.1;Name=WP_000009306.1;gbkey=CDS;gene=yodC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310722.1;locus_tag=AC56_RS0126215;product=YodC family protein;protein_id=WP_000009306.1;transl_table=11
NZ_JJLS01000190.1	RefSeq	gene	4477	5394	.	-	.	ID=gene-AC56_RS12025;Name=yedI;gbkey=Gene;gene=yedI;gene_biotype=protein_coding;locus_tag=AC56_RS12025;old_locus_tag=AC56_2212
NZ_JJLS01000190.1	Protein Homology	CDS	4477	5394	.	-	0	ID=cds-WP_000922683.1;Parent=gene-AC56_RS12025;Dbxref=GenBank:WP_000922683.1;Name=WP_000922683.1;gbkey=CDS;gene=yedI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310723.1;locus_tag=AC56_RS12025;product=DUF808 domain-containing protein;protein_id=WP_000922683.1;transl_table=11
NZ_JJLS01000190.1	RefSeq	gene	5567	6487	.	+	.	ID=gene-AC56_RS12020;Name=yedA;gbkey=Gene;gene=yedA;gene_biotype=protein_coding;locus_tag=AC56_RS12020;old_locus_tag=AC56_2213
NZ_JJLS01000190.1	Protein Homology	CDS	5567	6487	.	+	0	ID=cds-WP_001507517.1;Parent=gene-AC56_RS12020;Dbxref=GenBank:WP_001507517.1;Name=WP_001507517.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yedA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310724.1;locus_tag=AC56_RS12020;product=drug/metabolite exporter YedA;protein_id=WP_001507517.1;transl_table=11
NZ_JJLS01000190.1	RefSeq	gene	6476	6946	.	-	.	ID=gene-AC56_RS12015;Name=vsr;gbkey=Gene;gene=vsr;gene_biotype=protein_coding;locus_tag=AC56_RS12015;old_locus_tag=AC56_2214
NZ_JJLS01000190.1	Protein Homology	CDS	6476	6946	.	-	0	ID=cds-WP_000786004.1;Parent=gene-AC56_RS12015;Dbxref=GenBank:WP_000786004.1;Name=WP_000786004.1;gbkey=CDS;gene=vsr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416469.1;locus_tag=AC56_RS12015;product=VSPR family DNA mismatch endonuclease;protein_id=WP_000786004.1;transl_table=11
NZ_JJLS01000190.1	RefSeq	gene	6927	8345	.	-	.	ID=gene-AC56_RS12010;Name=dcm;gbkey=Gene;gene=dcm;gene_biotype=protein_coding;locus_tag=AC56_RS12010;old_locus_tag=AC56_2215
NZ_JJLS01000190.1	Protein Homology	CDS	6927	8345	.	-	0	ID=cds-WP_001157230.1;Parent=gene-AC56_RS12010;Dbxref=GenBank:WP_001157230.1;Name=WP_001157230.1;gbkey=CDS;gene=dcm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310726.1;locus_tag=AC56_RS12010;product=DNA-cytosine methyltransferase;protein_id=WP_001157230.1;transl_table=11
NZ_JJLS01000190.1	RefSeq	gene	8412	9107	.	-	.	ID=gene-AC56_RS12005;Name=yedJ;gbkey=Gene;gene=yedJ;gene_biotype=protein_coding;locus_tag=AC56_RS12005;old_locus_tag=AC56_2216
NZ_JJLS01000190.1	Protein Homology	CDS	8412	9107	.	-	0	ID=cds-WP_000365580.1;Parent=gene-AC56_RS12005;Dbxref=GenBank:WP_000365580.1;Name=WP_000365580.1;gbkey=CDS;gene=yedJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416471.1;locus_tag=AC56_RS12005;product=phosphohydrolase;protein_id=WP_000365580.1;transl_table=11
NZ_JJLS01000190.1	RefSeq	gene	9147	9428	.	-	.	ID=gene-AC56_RS12000;Name=drpB;gbkey=Gene;gene=drpB;gene_biotype=protein_coding;locus_tag=AC56_RS12000;old_locus_tag=AC56_2217
NZ_JJLS01000190.1	Protein Homology	CDS	9147	9428	.	-	0	ID=cds-WP_248790147.1;Parent=gene-AC56_RS12000;Dbxref=GenBank:WP_248790147.1;Name=WP_248790147.1;Ontology_term=GO:0051301;gbkey=CDS;gene=drpB;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295638.1;locus_tag=AC56_RS12000;product=cell division protein DrpB;protein_id=WP_248790147.1;transl_table=11
NZ_JJLS01000190.1	RefSeq	gene	10079	11152	.	+	.	ID=gene-AC56_RS11995;Name=AC56_RS11995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11995;old_locus_tag=AC56_2218
NZ_JJLS01000190.1	Protein Homology	CDS	10079	11152	.	+	0	ID=cds-WP_032278434.1;Parent=gene-AC56_RS11995;Dbxref=GenBank:WP_032278434.1;Name=WP_032278434.1;Ontology_term=GO:0015288,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000824385.1;locus_tag=AC56_RS11995;product=porin;protein_id=WP_032278434.1;transl_table=11
NZ_JJLS01000190.1	RefSeq	gene	11292	11486	.	-	.	ID=gene-AC56_RS32765;Name=AC56_RS32765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS32765;old_locus_tag=AC56_2219
NZ_JJLS01000190.1	Protein Homology	CDS	11292	11486	.	-	0	ID=cds-WP_001402296.1;Parent=gene-AC56_RS32765;Dbxref=GenBank:WP_001402296.1;Name=WP_001402296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001353128.1;locus_tag=AC56_RS32765;product=hypothetical protein;protein_id=WP_001402296.1;transl_table=11
NZ_JJLS01000190.1	RefSeq	gene	11745	12596	.	+	.	ID=gene-AC56_RS11990;Name=hchA;gbkey=Gene;gene=hchA;gene_biotype=protein_coding;locus_tag=AC56_RS11990;old_locus_tag=AC56_2220
NZ_JJLS01000190.1	Protein Homology	CDS	11745	12596	.	+	0	ID=cds-WP_032278435.1;Parent=gene-AC56_RS11990;Dbxref=GenBank:WP_032278435.1;Name=WP_032278435.1;Ontology_term=GO:0036524;gbkey=CDS;gene=hchA;go_function=protein deglycase activity|0036524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416476.1;locus_tag=AC56_RS11990;product=glyoxalase III HchA;protein_id=WP_032278435.1;transl_table=11
NZ_JJLS01000190.1	RefSeq	gene	12704	14062	.	-	.	ID=gene-AC56_RS11985;Name=hprS;gbkey=Gene;gene=hprS;gene_biotype=protein_coding;locus_tag=AC56_RS11985;old_locus_tag=AC56_2221
NZ_JJLS01000190.1	Protein Homology	CDS	12704	14062	.	-	0	ID=cds-WP_000826766.1;Parent=gene-AC56_RS11985;Dbxref=GenBank:WP_000826766.1;Name=WP_000826766.1;gbkey=CDS;gene=hprS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416477.1;locus_tag=AC56_RS11985;product=two-component system sensor histidine kinase HprS;protein_id=WP_000826766.1;transl_table=11
NZ_JJLS01000190.1	RefSeq	gene	14062	14733	.	-	.	ID=gene-AC56_RS11980;Name=hprR;gbkey=Gene;gene=hprR;gene_biotype=protein_coding;locus_tag=AC56_RS11980;old_locus_tag=AC56_2222
NZ_JJLS01000190.1	Protein Homology	CDS	14062	14733	.	-	0	ID=cds-WP_001339045.1;Parent=gene-AC56_RS11980;Dbxref=GenBank:WP_001339045.1;Name=WP_001339045.1;gbkey=CDS;gene=hprR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707854.2;locus_tag=AC56_RS11980;product=response regulator transcription factor HprR;protein_id=WP_001339045.1;transl_table=11
NZ_JJLS01000190.1	RefSeq	gene	14866	15279	.	+	.	ID=gene-AC56_RS11975;Name=hiuH;gbkey=Gene;gene=hiuH;gene_biotype=protein_coding;locus_tag=AC56_RS11975;old_locus_tag=AC56_2223
NZ_JJLS01000190.1	Protein Homology	CDS	14866	15279	.	+	0	ID=cds-WP_000920127.1;Parent=gene-AC56_RS11975;Dbxref=GenBank:WP_000920127.1;Name=WP_000920127.1;gbkey=CDS;gene=hiuH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707855.1;locus_tag=AC56_RS11975;product=hydroxyisourate hydrolase;protein_id=WP_000920127.1;transl_table=11
NZ_JJLS01000190.1	RefSeq	gene	15388	16392	.	+	.	ID=gene-AC56_RS11970;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=AC56_RS11970;old_locus_tag=AC56_2224
NZ_JJLS01000190.1	Protein Homology	CDS	15388	16392	.	+	0	ID=cds-WP_000740094.1;Parent=gene-AC56_RS11970;Dbxref=GenBank:WP_000740094.1;Name=WP_000740094.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310736.1;locus_tag=AC56_RS11970;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WP_000740094.1;transl_table=11
NZ_JJLS01000190.1	RefSeq	gene	16393	17028	.	+	.	ID=gene-AC56_RS11965;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=AC56_RS11965;old_locus_tag=AC56_2225
NZ_JJLS01000190.1	Protein Homology	CDS	16393	17028	.	+	0	ID=cds-WP_001240102.1;Parent=gene-AC56_RS11965;Dbxref=GenBank:WP_001240102.1;Name=WP_001240102.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416481.1;locus_tag=AC56_RS11965;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WP_001240102.1;transl_table=11
NZ_JJLS01000190.1	RefSeq	pseudogene	17285	17548	.	+	.	ID=gene-AC56_RS11960;Name=AC56_RS11960;end_range=17548,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS11960;old_locus_tag=AC56_2226;partial=true;pseudo=true
NZ_JJLS01000190.1	Protein Homology	CDS	17285	17548	.	+	0	ID=cds-AC56_RS11960;Parent=gene-AC56_RS11960;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0008270;end_range=17548,.;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416482.1;locus_tag=AC56_RS11960;partial=true;product=ZinT/AdcA family metal-binding protein;pseudo=true;transl_table=11
NZ_JJLS01000190.1	RefSeq	gene	17616	17961	.	+	.	ID=gene-AC56_RS11955;Name=AC56_RS11955;end_range=17961,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11955;old_locus_tag=AC56_2227;partial=true
NZ_JJLS01000190.1	Protein Homology	CDS	17616	17961	.	+	0	ID=cds-WP_032192237.1;Parent=gene-AC56_RS11955;Dbxref=GenBank:WP_032192237.1;Name=WP_032192237.1;end_range=17961,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS11955;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032192237.1;transl_table=11
##sequence-region NZ_JJLS01000191.1 1 4173
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000191.1	RefSeq	region	1	4173	.	+	.	ID=NZ_JJLS01000191.1:1..4173;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000191.1	RefSeq	gene	1	341	.	-	.	ID=gene-AC56_RS11950;Name=AC56_RS11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11950;old_locus_tag=AC56_2228;partial=true;start_range=.,1
NZ_JJLS01000191.1	Protein Homology	CDS	1	341	.	-	0	ID=cds-WP_032278444.1;Parent=gene-AC56_RS11950;Dbxref=GenBank:WP_032278444.1;Name=WP_032278444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016239947.1;locus_tag=AC56_RS11950;partial=true;product=DUF2254 family protein;protein_id=WP_032278444.1;start_range=.,1;transl_table=11
NZ_JJLS01000191.1	RefSeq	gene	404	2401	.	-	.	ID=gene-AC56_RS11945;Name=AC56_RS11945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11945;old_locus_tag=AC56_2229
NZ_JJLS01000191.1	Protein Homology	CDS	404	2401	.	-	0	ID=cds-WP_001293436.1-3;Parent=gene-AC56_RS11945;Dbxref=GenBank:WP_001293436.1;Name=WP_001293436.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004119118.1;locus_tag=AC56_RS11945;product=BCCT family transporter;protein_id=WP_001293436.1;transl_table=11
NZ_JJLS01000191.1	RefSeq	pseudogene	2555	2767	.	-	.	ID=gene-AC56_RS31290;Name=AC56_RS31290;end_range=2767,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS31290;old_locus_tag=AC56_2230;partial=true;pseudo=true
NZ_JJLS01000191.1	Protein Homology	CDS	2555	2767	.	-	0	ID=cds-AC56_RS31290;Parent=gene-AC56_RS31290;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=2767,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611998.1;locus_tag=AC56_RS31290;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11
NZ_JJLS01000191.1	RefSeq	pseudogene	2787	3680	.	-	.	ID=gene-AC56_RS11935;Name=AC56_RS11935;end_range=3680,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS11935;old_locus_tag=AC56_2231;partial=true;pseudo=true
NZ_JJLS01000191.1	Protein Homology	CDS	2787	3680	.	-	0	ID=cds-AC56_RS11935;Parent=gene-AC56_RS11935;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=3680,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612006.1;locus_tag=AC56_RS11935;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11
NZ_JJLS01000191.1	RefSeq	gene	3748	4173	.	+	.	ID=gene-AC56_RS11930;Name=AC56_RS11930;end_range=4173,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11930;old_locus_tag=AC56_2232;partial=true
NZ_JJLS01000191.1	Protein Homology	CDS	3748	4173	.	+	0	ID=cds-WP_032278442.1;Parent=gene-AC56_RS11930;Dbxref=GenBank:WP_032278442.1;Name=WP_032278442.1;end_range=4173,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_047234906.1;locus_tag=AC56_RS11930;partial=true;product=helix-turn-helix domain-containing protein;protein_id=WP_032278442.1;transl_table=11
##sequence-region NZ_JJLS01000192.1 1 4938
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000192.1	RefSeq	region	1	4938	.	+	.	ID=NZ_JJLS01000192.1:1..4938;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000192.1	RefSeq	gene	1	349	.	+	.	ID=gene-AC56_RS0126230;Name=AC56_RS0126230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0126230;old_locus_tag=AC56_2233;partial=true;start_range=.,1
NZ_JJLS01000192.1	Protein Homology	CDS	1	349	.	+	1	ID=cds-WP_032278363.1;Parent=gene-AC56_RS0126230;Dbxref=GenBank:WP_032278363.1;Name=WP_032278363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS0126230;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032278363.1;start_range=.,1;transl_table=11
NZ_JJLS01000192.1	RefSeq	pseudogene	499	888	.	+	.	ID=gene-AC56_RS0126235;Name=AC56_RS0126235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0126235;old_locus_tag=AC56_2234;partial=true;pseudo=true;start_range=.,499
NZ_JJLS01000192.1	Protein Homology	CDS	499	888	.	+	0	ID=cds-AC56_RS0126235;Parent=gene-AC56_RS0126235;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416482.1;locus_tag=AC56_RS0126235;partial=true;product=ZinT/AdcA family metal-binding protein;pseudo=true;start_range=.,499;transl_table=11
NZ_JJLS01000192.1	RefSeq	gene	1231	1761	.	+	.	ID=gene-AC56_RS11925;Name=yodB;gbkey=Gene;gene=yodB;gene_biotype=protein_coding;locus_tag=AC56_RS11925;old_locus_tag=AC56_2235
NZ_JJLS01000192.1	Protein Homology	CDS	1231	1761	.	+	0	ID=cds-WP_001079074.1;Parent=gene-AC56_RS11925;Dbxref=GenBank:WP_001079074.1;Name=WP_001079074.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;gene=yodB;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416483.4;locus_tag=AC56_RS11925;product=cytochrome b;protein_id=WP_001079074.1;transl_table=11
NZ_JJLS01000192.1	RefSeq	gene	2331	2420	.	-	.	ID=gene-AC56_RS11920;Name=AC56_RS11920;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS11920;old_locus_tag=AC56_2236
NZ_JJLS01000192.1	tRNAscan-SE	tRNA	2331	2420	.	-	.	ID=rna-AC56_RS11920;Parent=gene-AC56_RS11920;anticodon=(pos:complement(2384..2386));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS11920;product=tRNA-Ser
NZ_JJLS01000192.1	tRNAscan-SE	exon	2331	2420	.	-	.	ID=exon-AC56_RS11920-1;Parent=rna-AC56_RS11920;anticodon=(pos:complement(2384..2386));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS11920;product=tRNA-Ser
NZ_JJLS01000192.1	RefSeq	gene	2514	3311	.	+	.	ID=gene-AC56_RS11915;Name=mtfA;gbkey=Gene;gene=mtfA;gene_biotype=protein_coding;locus_tag=AC56_RS11915;old_locus_tag=AC56_2237
NZ_JJLS01000192.1	Protein Homology	CDS	2514	3311	.	+	0	ID=cds-WP_004016369.1;Parent=gene-AC56_RS11915;Dbxref=GenBank:WP_004016369.1;Name=WP_004016369.1;Ontology_term=GO:0008237;gbkey=CDS;gene=mtfA;go_function=metallopeptidase activity|0008237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310801.2;locus_tag=AC56_RS11915;product=DgsA anti-repressor MtfA;protein_id=WP_004016369.1;transl_table=11
NZ_JJLS01000192.1	RefSeq	gene	3412	3487	.	+	.	ID=gene-AC56_RS11910;Name=AC56_RS11910;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS11910;old_locus_tag=AC56_2238
NZ_JJLS01000192.1	tRNAscan-SE	tRNA	3412	3487	.	+	.	ID=rna-AC56_RS11910;Parent=gene-AC56_RS11910;anticodon=(pos:3445..3447);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS11910;product=tRNA-Asn
NZ_JJLS01000192.1	tRNAscan-SE	exon	3412	3487	.	+	.	ID=exon-AC56_RS11910-1;Parent=rna-AC56_RS11910;anticodon=(pos:3445..3447);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS11910;product=tRNA-Asn
NZ_JJLS01000192.1	RefSeq	pseudogene	3649	4911	.	+	.	ID=gene-AC56_RS32970;Name=AC56_RS32970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS32970;pseudo=true
NZ_JJLS01000192.1	Protein Homology	CDS	3649	4911	.	+	0	ID=cds-AC56_RS32970;Parent=gene-AC56_RS32970;Note=internal stop;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000055676.1;locus_tag=AC56_RS32970;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000193.1 1 7395
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000193.1	RefSeq	region	1	7395	.	+	.	ID=NZ_JJLS01000193.1:1..7395;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000193.1	RefSeq	pseudogene	1	487	.	+	.	ID=gene-AC56_RS0126250;Name=AC56_RS0126250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0126250;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000193.1	Protein Homology	CDS	1	487	.	+	1	ID=cds-AC56_RS0126250;Parent=gene-AC56_RS0126250;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS0126250;partial=true;product=IS5-like element ISKpn26 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000193.1	RefSeq	pseudogene	634	975	.	+	.	ID=gene-AC56_RS29580;Name=AC56_RS29580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS29580;partial=true;pseudo=true;start_range=.,634
NZ_JJLS01000193.1	Protein Homology	CDS	634	975	.	+	0	ID=cds-AC56_RS29580;Parent=gene-AC56_RS29580;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416485.4;locus_tag=AC56_RS29580;partial=true;product=hypothetical protein;pseudo=true;start_range=.,634;transl_table=11
NZ_JJLS01000193.1	RefSeq	gene	1237	2289	.	-	.	ID=gene-AC56_RS11905;Name=AC56_RS11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11905;old_locus_tag=AC56_2243
NZ_JJLS01000193.1	Protein Homology	CDS	1237	2289	.	-	0	ID=cds-WP_000477906.1;Parent=gene-AC56_RS11905;Dbxref=GenBank:WP_000477906.1;Name=WP_000477906.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310804.1;locus_tag=AC56_RS11905;product=glycosyltransferase family 9 protein;protein_id=WP_000477906.1;transl_table=11
NZ_JJLS01000193.1	RefSeq	gene	2604	3920	.	+	.	ID=gene-AC56_RS11900;Name=shiA;gbkey=Gene;gene=shiA;gene_biotype=protein_coding;locus_tag=AC56_RS11900;old_locus_tag=AC56_2244
NZ_JJLS01000193.1	Protein Homology	CDS	2604	3920	.	+	0	ID=cds-WP_000378572.1;Parent=gene-AC56_RS11900;Dbxref=GenBank:WP_000378572.1;Name=WP_000378572.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=shiA;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416488.1;locus_tag=AC56_RS11900;product=shikimate transporter;protein_id=WP_000378572.1;transl_table=11
NZ_JJLS01000193.1	RefSeq	gene	4022	5476	.	+	.	ID=gene-AC56_RS11895;Name=amn;gbkey=Gene;gene=amn;gene_biotype=protein_coding;locus_tag=AC56_RS11895;old_locus_tag=AC56_2245
NZ_JJLS01000193.1	Protein Homology	CDS	4022	5476	.	+	0	ID=cds-WP_001060244.1;Parent=gene-AC56_RS11895;Dbxref=GenBank:WP_001060244.1;Name=WP_001060244.1;Ontology_term=GO:0009116,GO:0044209,GO:0008714;gbkey=CDS;gene=amn;go_function=AMP nucleosidase activity|0008714||IEA;go_process=nucleoside metabolic process|0009116||IEA,AMP salvage|0044209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310806.1;locus_tag=AC56_RS11895;product=AMP nucleosidase;protein_id=WP_001060244.1;transl_table=11
NZ_JJLS01000193.1	RefSeq	gene	5819	6535	.	+	.	ID=gene-AC56_RS11890;Name=yeeN;gbkey=Gene;gene=yeeN;gene_biotype=protein_coding;locus_tag=AC56_RS11890;old_locus_tag=AC56_2246
NZ_JJLS01000193.1	Protein Homology	CDS	5819	6535	.	+	0	ID=cds-WP_000532912.1;Parent=gene-AC56_RS11890;Dbxref=GenBank:WP_000532912.1;Name=WP_000532912.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=yeeN;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310807.1;locus_tag=AC56_RS11890;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000532912.1;transl_table=11
NZ_JJLS01000193.1	RefSeq	pseudogene	6783	7395	.	+	.	ID=gene-AC56_RS11885;Name=AC56_RS11885;end_range=7395,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS11885;old_locus_tag=AC56_2247;partial=true;pseudo=true
NZ_JJLS01000193.1	Protein Homology	CDS	6783	7395	.	+	0	ID=cds-AC56_RS11885;Parent=gene-AC56_RS11885;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;end_range=7395,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS11885;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000194.1 1 79730
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000194.1	RefSeq	region	1	79730	.	+	.	ID=NZ_JJLS01000194.1:1..79730;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000194.1	RefSeq	gene	1	696	.	+	.	ID=gene-AC56_RS0126260;Name=AC56_RS0126260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0126260;old_locus_tag=AC56_2248;partial=true;start_range=.,1
NZ_JJLS01000194.1	Protein Homology	CDS	1	248	.	+	1	ID=cds-WP_248790145.1-2;Parent=gene-AC56_RS0126260;Dbxref=GenBank:WP_248790145.1;Name=WP_248790145.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS0126260;partial=true;product=IS1-like element IS1B family transposase;protein_id=WP_248790145.1;start_range=.,1;transl_table=11
NZ_JJLS01000194.1	Protein Homology	CDS	248	696	.	+	2	ID=cds-WP_248790145.1-2;Parent=gene-AC56_RS0126260;Dbxref=GenBank:WP_248790145.1;Name=WP_248790145.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS0126260;partial=true;product=IS1-like element IS1B family transposase;protein_id=WP_248790145.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	981	1056	.	-	.	ID=gene-AC56_RS11880;Name=AC56_RS11880;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS11880;old_locus_tag=AC56_2249
NZ_JJLS01000194.1	tRNAscan-SE	tRNA	981	1056	.	-	.	ID=rna-AC56_RS11880;Parent=gene-AC56_RS11880;anticodon=(pos:complement(1021..1023));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS11880;product=tRNA-Asn
NZ_JJLS01000194.1	tRNAscan-SE	exon	981	1056	.	-	.	ID=exon-AC56_RS11880-1;Parent=rna-AC56_RS11880;anticodon=(pos:complement(1021..1023));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS11880;product=tRNA-Asn
NZ_JJLS01000194.1	RefSeq	gene	1157	2644	.	-	.	ID=gene-AC56_RS11875;Name=yeeO;gbkey=Gene;gene=yeeO;gene_biotype=protein_coding;locus_tag=AC56_RS11875;old_locus_tag=AC56_2250
NZ_JJLS01000194.1	Protein Homology	CDS	1157	2644	.	-	0	ID=cds-WP_077632017.1;Parent=gene-AC56_RS11875;Dbxref=GenBank:WP_077632017.1;Name=WP_077632017.1;gbkey=CDS;gene=yeeO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001323172.1;locus_tag=AC56_RS11875;product=toxic metabolite efflux MATE transporter YeeO;protein_id=WP_077632017.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	2805	2880	.	+	.	ID=gene-AC56_RS11870;Name=AC56_RS11870;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS11870;old_locus_tag=AC56_2251
NZ_JJLS01000194.1	tRNAscan-SE	tRNA	2805	2880	.	+	.	ID=rna-AC56_RS11870;Parent=gene-AC56_RS11870;anticodon=(pos:2838..2840);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS11870;product=tRNA-Asn
NZ_JJLS01000194.1	tRNAscan-SE	exon	2805	2880	.	+	.	ID=exon-AC56_RS11870-1;Parent=rna-AC56_RS11870;anticodon=(pos:2838..2840);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS11870;product=tRNA-Asn
NZ_JJLS01000194.1	RefSeq	gene	3042	4304	.	+	.	ID=gene-AC56_RS11865;Name=AC56_RS11865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11865;old_locus_tag=AC56_2252
NZ_JJLS01000194.1	Protein Homology	CDS	3042	4304	.	+	0	ID=cds-WP_000059623.1;Parent=gene-AC56_RS11865;Dbxref=GenBank:WP_000059623.1;Name=WP_000059623.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227760.1;locus_tag=AC56_RS11865;product=tyrosine-type recombinase/integrase;protein_id=WP_000059623.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	4498	5802	.	-	.	ID=gene-AC56_RS11860;Name=ybtS;gbkey=Gene;gene=ybtS;gene_biotype=protein_coding;locus_tag=AC56_RS11860;old_locus_tag=AC56_2253
NZ_JJLS01000194.1	Protein Homology	CDS	4498	5802	.	-	0	ID=cds-WP_000703040.1;Parent=gene-AC56_RS11860;Dbxref=GenBank:WP_000703040.1;Name=WP_000703040.1;gbkey=CDS;gene=ybtS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227761.1;locus_tag=AC56_RS11860;product=yersiniabactin biosynthesis salicylate synthase Irp9/YbtS;protein_id=WP_000703040.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	5830	7110	.	-	.	ID=gene-AC56_RS11855;Name=ybtX;gbkey=Gene;gene=ybtX;gene_biotype=protein_coding;locus_tag=AC56_RS11855;old_locus_tag=AC56_2254
NZ_JJLS01000194.1	Protein Homology	CDS	5830	7110	.	-	0	ID=cds-WP_001286280.1;Parent=gene-AC56_RS11855;Dbxref=GenBank:WP_001286280.1;Name=WP_001286280.1;gbkey=CDS;gene=ybtX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227762.1;locus_tag=AC56_RS11855;product=yersiniabactin-associated zinc MFS transporter YbtX;protein_id=WP_001286280.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	7103	8905	.	-	.	ID=gene-AC56_RS11850;Name=ybtQ;gbkey=Gene;gene=ybtQ;gene_biotype=protein_coding;locus_tag=AC56_RS11850;old_locus_tag=AC56_2255
NZ_JJLS01000194.1	Protein Homology	CDS	7103	8905	.	-	0	ID=cds-WP_001446633.1;Parent=gene-AC56_RS11850;Dbxref=GenBank:WP_001446633.1;Name=WP_001446633.1;gbkey=CDS;gene=ybtQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227763.1;locus_tag=AC56_RS11850;product=yersiniabactin ABC transporter ATP-binding/permease protein YbtQ;protein_id=WP_001446633.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	8892	10604	.	-	.	ID=gene-AC56_RS11845;Name=ybtP;gbkey=Gene;gene=ybtP;gene_biotype=protein_coding;locus_tag=AC56_RS11845;old_locus_tag=AC56_2256
NZ_JJLS01000194.1	Protein Homology	CDS	8892	10604	.	-	0	ID=cds-WP_001327262.1;Parent=gene-AC56_RS11845;Dbxref=GenBank:WP_001327262.1;Name=WP_001327262.1;gbkey=CDS;gene=ybtP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227764.1;locus_tag=AC56_RS11845;product=yersiniabactin ABC transporter ATP-binding/permease protein YbtP;protein_id=WP_001327262.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	10861	11820	.	+	.	ID=gene-AC56_RS11840;Name=ybtA;gbkey=Gene;gene=ybtA;gene_biotype=protein_coding;locus_tag=AC56_RS11840;old_locus_tag=AC56_2257
NZ_JJLS01000194.1	Protein Homology	CDS	10861	11820	.	+	0	ID=cds-WP_000140406.1;Parent=gene-AC56_RS11840;Dbxref=GenBank:WP_000140406.1;Name=WP_000140406.1;gbkey=CDS;gene=ybtA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227765.1;locus_tag=AC56_RS11840;product=yersiniabactin transcriptional regulator YbtA;protein_id=WP_000140406.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	12011	18118	.	+	.	ID=gene-AC56_RS11835;Name=irp2;gbkey=Gene;gene=irp2;gene_biotype=protein_coding;locus_tag=AC56_RS11835;old_locus_tag=AC56_2258
NZ_JJLS01000194.1	Protein Homology	CDS	12011	18118	.	+	0	ID=cds-WP_000623067.1;Parent=gene-AC56_RS11835;Dbxref=GenBank:WP_000623067.1;Name=WP_000623067.1;Ontology_term=GO:1904091;gbkey=CDS;gene=irp2;go_function=non-ribosomal peptide synthetase activity|1904091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227766.1;locus_tag=AC56_RS11835;product=yersiniabactin non-ribosomal peptide synthetase HMWP2;protein_id=WP_000623067.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	18206	27694	.	+	.	ID=gene-AC56_RS11830;Name=irp1;gbkey=Gene;gene=irp1;gene_biotype=protein_coding;locus_tag=AC56_RS11830;old_locus_tag=AC56_2259
NZ_JJLS01000194.1	Protein Homology	CDS	18206	27694	.	+	0	ID=cds-WP_032278452.1;Parent=gene-AC56_RS11830;Dbxref=GenBank:WP_032278452.1;Name=WP_032278452.1;gbkey=CDS;gene=irp1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227767.1;locus_tag=AC56_RS11830;product=yersiniabactin polyketide synthase HMWP1;protein_id=WP_032278452.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	27691	28791	.	+	.	ID=gene-AC56_RS11825;Name=ybtU;gbkey=Gene;gene=ybtU;gene_biotype=protein_coding;locus_tag=AC56_RS11825;old_locus_tag=AC56_2260
NZ_JJLS01000194.1	Protein Homology	CDS	27691	28791	.	+	0	ID=cds-WP_000982866.1;Parent=gene-AC56_RS11825;Dbxref=GenBank:WP_000982866.1;Name=WP_000982866.1;gbkey=CDS;gene=ybtU;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227768.1;locus_tag=AC56_RS11825;product=yersiniabactin biosynthesis oxidoreductase YbtU;protein_id=WP_000982866.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	28788	29591	.	+	.	ID=gene-AC56_RS11820;Name=ybtT;gbkey=Gene;gene=ybtT;gene_biotype=protein_coding;locus_tag=AC56_RS11820;old_locus_tag=AC56_2261
NZ_JJLS01000194.1	Protein Homology	CDS	28788	29591	.	+	0	ID=cds-WP_000194284.1;Parent=gene-AC56_RS11820;Dbxref=GenBank:WP_000194284.1;Name=WP_000194284.1;gbkey=CDS;gene=ybtT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212799.1;locus_tag=AC56_RS11820;product=yersiniabactin biosynthesis thioesterase YbtT;protein_id=WP_000194284.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	29595	31172	.	+	.	ID=gene-AC56_RS11815;Name=ybtE;gbkey=Gene;gene=ybtE;gene_biotype=protein_coding;locus_tag=AC56_RS11815;old_locus_tag=AC56_2262
NZ_JJLS01000194.1	Protein Homology	CDS	29595	31172	.	+	0	ID=cds-WP_001088826.1;Parent=gene-AC56_RS11815;Dbxref=GenBank:WP_001088826.1;Name=WP_001088826.1;gbkey=CDS;gene=ybtE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227770.1;locus_tag=AC56_RS11815;product=yersiniabactin biosynthesis salycil-AMP ligase YbtE;protein_id=WP_001088826.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	31303	33324	.	+	.	ID=gene-AC56_RS11810;Name=fyuA;gbkey=Gene;gene=fyuA;gene_biotype=protein_coding;locus_tag=AC56_RS11810;old_locus_tag=AC56_2263
NZ_JJLS01000194.1	Protein Homology	CDS	31303	33324	.	+	0	ID=cds-WP_032278453.1;Parent=gene-AC56_RS11810;Dbxref=GenBank:WP_032278453.1;Name=WP_032278453.1;gbkey=CDS;gene=fyuA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227771.1;locus_tag=AC56_RS11810;product=siderophore yersiniabactin receptor FyuA;protein_id=WP_032278453.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	34195	35121	.	+	.	ID=gene-AC56_RS11805;Name=AC56_RS11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11805;old_locus_tag=AC56_2264
NZ_JJLS01000194.1	Protein Homology	CDS	34195	35121	.	+	0	ID=cds-WP_000039790.1;Parent=gene-AC56_RS11805;Dbxref=GenBank:WP_000039790.1;Name=WP_000039790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227772.1;locus_tag=AC56_RS11805;product=hypothetical protein;protein_id=WP_000039790.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	35261	35446	.	+	.	ID=gene-AC56_RS0126265;Name=AC56_RS0126265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0126265
NZ_JJLS01000194.1	Protein Homology	CDS	35261	35446	.	+	0	ID=cds-WP_000205185.1;Parent=gene-AC56_RS0126265;Dbxref=GenBank:WP_000205185.1;Name=WP_000205185.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000200568.1;locus_tag=AC56_RS0126265;product=AlpA family transcriptional regulator;protein_id=WP_000205185.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	35468	35650	.	+	.	ID=gene-AC56_RS0126270;Name=AC56_RS0126270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0126270
NZ_JJLS01000194.1	Protein Homology	CDS	35468	35650	.	+	0	ID=cds-WP_001309570.1;Parent=gene-AC56_RS0126270;Dbxref=GenBank:WP_001309570.1;Name=WP_001309570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001309570.1;locus_tag=AC56_RS0126270;product=hypothetical protein;protein_id=WP_001309570.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	35635	36216	.	+	.	ID=gene-AC56_RS11800;Name=AC56_RS11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11800;old_locus_tag=AC56_2265
NZ_JJLS01000194.1	Protein Homology	CDS	35635	36216	.	+	0	ID=cds-WP_000937857.1;Parent=gene-AC56_RS11800;Dbxref=GenBank:WP_000937857.1;Name=WP_000937857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227773.1;locus_tag=AC56_RS11800;product=DUF2857 domain-containing protein;protein_id=WP_000937857.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	36206	36415	.	+	.	ID=gene-AC56_RS11795;Name=AC56_RS11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11795;old_locus_tag=AC56_2266
NZ_JJLS01000194.1	Protein Homology	CDS	36206	36415	.	+	0	ID=cds-WP_001112403.1;Parent=gene-AC56_RS11795;Dbxref=GenBank:WP_001112403.1;Name=WP_001112403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112402.1;locus_tag=AC56_RS11795;product=TraR/DksA family transcriptional regulator;protein_id=WP_001112403.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	pseudogene	36637	36786	.	+	.	ID=gene-AC56_RS31320;Name=AC56_RS31320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS31320;old_locus_tag=AC56_2267;partial=true;pseudo=true;start_range=.,36637
NZ_JJLS01000194.1	Protein Homology	CDS	36637	36786	.	+	0	ID=cds-AC56_RS31320;Parent=gene-AC56_RS31320;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012764630.1;locus_tag=AC56_RS31320;partial=true;product=Hha/YmoA family nucleoid-associated regulatory protein;pseudo=true;start_range=.,36637;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	37355	37588	.	+	.	ID=gene-AC56_RS0126275;Name=AC56_RS0126275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0126275
NZ_JJLS01000194.1	Protein Homology	CDS	37355	37588	.	+	0	ID=cds-WP_001231171.1;Parent=gene-AC56_RS0126275;Dbxref=GenBank:WP_001231171.1;Name=WP_001231171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227775.1;locus_tag=AC56_RS0126275;product=hypothetical protein;protein_id=WP_001231171.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	37661	38371	.	+	.	ID=gene-AC56_RS11785;Name=AC56_RS11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11785;old_locus_tag=AC56_2269
NZ_JJLS01000194.1	Protein Homology	CDS	37661	38371	.	+	0	ID=cds-WP_001446637.1;Parent=gene-AC56_RS11785;Dbxref=GenBank:WP_001446637.1;Name=WP_001446637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227776.1;locus_tag=AC56_RS11785;product=lytic transglycosylase domain-containing protein;protein_id=WP_001446637.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	38371	38664	.	+	.	ID=gene-AC56_RS11780;Name=AC56_RS11780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11780;old_locus_tag=AC56_2270
NZ_JJLS01000194.1	Protein Homology	CDS	38371	38664	.	+	0	ID=cds-WP_000600171.1;Parent=gene-AC56_RS11780;Dbxref=GenBank:WP_000600171.1;Name=WP_000600171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012885319.1;locus_tag=AC56_RS11780;product=TrbC/VirB2 family protein;protein_id=WP_000600171.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	38677	41415	.	+	.	ID=gene-AC56_RS11775;Name=AC56_RS11775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11775;old_locus_tag=AC56_2271
NZ_JJLS01000194.1	Protein Homology	CDS	38677	41415	.	+	0	ID=cds-WP_001096399.1;Parent=gene-AC56_RS11775;Dbxref=GenBank:WP_001096399.1;Name=WP_001096399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227778.1;locus_tag=AC56_RS11775;product=VirB3 family type IV secretion system protein;protein_id=WP_001096399.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	41434	42147	.	+	.	ID=gene-AC56_RS11770;Name=AC56_RS11770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11770;old_locus_tag=AC56_2272
NZ_JJLS01000194.1	Protein Homology	CDS	41434	42147	.	+	0	ID=cds-WP_000848059.1;Parent=gene-AC56_RS11770;Dbxref=GenBank:WP_000848059.1;Name=WP_000848059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227779.1;locus_tag=AC56_RS11770;product=type IV secretion system protein;protein_id=WP_000848059.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	42155	42397	.	+	.	ID=gene-AC56_RS0126280;Name=AC56_RS0126280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0126280
NZ_JJLS01000194.1	Protein Homology	CDS	42155	42397	.	+	0	ID=cds-WP_000949385.1;Parent=gene-AC56_RS0126280;Dbxref=GenBank:WP_000949385.1;Name=WP_000949385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000949384.1;locus_tag=AC56_RS0126280;product=EexN family lipoprotein;protein_id=WP_000949385.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	42401	43474	.	+	.	ID=gene-AC56_RS11765;Name=AC56_RS11765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11765;old_locus_tag=AC56_2273
NZ_JJLS01000194.1	Protein Homology	CDS	42401	43474	.	+	0	ID=cds-WP_000014008.1;Parent=gene-AC56_RS11765;Dbxref=GenBank:WP_000014008.1;Name=WP_000014008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227780.1;locus_tag=AC56_RS11765;product=type IV secretion system protein;protein_id=WP_000014008.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	43692	44375	.	+	.	ID=gene-AC56_RS11755;Name=AC56_RS11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11755;old_locus_tag=AC56_2275
NZ_JJLS01000194.1	Protein Homology	CDS	43692	44375	.	+	0	ID=cds-WP_001005327.1;Parent=gene-AC56_RS11755;Dbxref=GenBank:WP_001005327.1;Name=WP_001005327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227782.1;locus_tag=AC56_RS11755;product=type IV secretion system protein;protein_id=WP_001005327.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	44372	45280	.	+	.	ID=gene-AC56_RS11750;Name=virB9;gbkey=Gene;gene=virB9;gene_biotype=protein_coding;locus_tag=AC56_RS11750;old_locus_tag=AC56_2276
NZ_JJLS01000194.1	Protein Homology	CDS	44372	45280	.	+	0	ID=cds-WP_000976329.1;Parent=gene-AC56_RS11750;Dbxref=GenBank:WP_000976329.1;Name=WP_000976329.1;gbkey=CDS;gene=virB9;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227783.1;locus_tag=AC56_RS11750;product=P-type conjugative transfer protein VirB9;protein_id=WP_000976329.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	45324	46586	.	+	.	ID=gene-AC56_RS11745;Name=virB10;gbkey=Gene;gene=virB10;gene_biotype=protein_coding;locus_tag=AC56_RS11745;old_locus_tag=AC56_2277
NZ_JJLS01000194.1	Protein Homology	CDS	45324	46586	.	+	0	ID=cds-WP_032178500.1;Parent=gene-AC56_RS11745;Dbxref=GenBank:WP_032178500.1;Name=WP_032178500.1;gbkey=CDS;gene=virB10;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227784.1;locus_tag=AC56_RS11745;product=VirB10/TraB/TrbI family type IV secretion system protein;protein_id=WP_032178500.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	46576	47601	.	+	.	ID=gene-AC56_RS11740;Name=virB11;gbkey=Gene;gene=virB11;gene_biotype=protein_coding;locus_tag=AC56_RS11740;old_locus_tag=AC56_2278
NZ_JJLS01000194.1	Protein Homology	CDS	46576	47601	.	+	0	ID=cds-WP_000125557.1;Parent=gene-AC56_RS11740;Dbxref=GenBank:WP_000125557.1;Name=WP_000125557.1;Ontology_term=GO:0044097,GO:0043684;gbkey=CDS;gene=virB11;go_component=type IV secretion system complex|0043684||IEA;go_process=secretion by the type IV secretion system|0044097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227785.1;locus_tag=AC56_RS11740;product=P-type DNA transfer ATPase VirB11;protein_id=WP_000125557.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	pseudogene	47598	48001	.	+	.	ID=gene-AC56_RS11735;Name=AC56_RS11735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS11735;old_locus_tag=AC56_2279;pseudo=true
NZ_JJLS01000194.1	Protein Homology	CDS	47598	48001	.	+	0	ID=cds-AC56_RS11735;Parent=gene-AC56_RS11735;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000592251.1;locus_tag=AC56_RS11735;product=cag pathogenicity island Cag12 family protein;pseudo=true;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	48037	48339	.	+	.	ID=gene-AC56_RS0126285;Name=AC56_RS0126285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0126285
NZ_JJLS01000194.1	Protein Homology	CDS	48037	48339	.	+	0	ID=cds-WP_001044654.1;Parent=gene-AC56_RS0126285;Dbxref=GenBank:WP_001044654.1;Name=WP_001044654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000754361.1;locus_tag=AC56_RS0126285;product=TrbM/KikA/MpfK family conjugal transfer protein;protein_id=WP_001044654.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	48384	48689	.	+	.	ID=gene-AC56_RS11730;Name=AC56_RS11730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11730;old_locus_tag=AC56_2280
NZ_JJLS01000194.1	Protein Homology	CDS	48384	48689	.	+	0	ID=cds-WP_001168332.1;Parent=gene-AC56_RS11730;Dbxref=GenBank:WP_001168332.1;Name=WP_001168332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172016.1;locus_tag=AC56_RS11730;product=hypothetical protein;protein_id=WP_001168332.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	49399	51258	.	+	.	ID=gene-AC56_RS11725;Name=AC56_RS11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11725;old_locus_tag=AC56_2281
NZ_JJLS01000194.1	Protein Homology	CDS	49399	51258	.	+	0	ID=cds-WP_000602685.1;Parent=gene-AC56_RS11725;Dbxref=GenBank:WP_000602685.1;Name=WP_000602685.1;Ontology_term=GO:0005524,GO:0016887,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227787.1;locus_tag=AC56_RS11725;product=type IV secretory system conjugative DNA transfer family protein;protein_id=WP_000602685.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	51268	52014	.	+	.	ID=gene-AC56_RS11720;Name=mobC;gbkey=Gene;gene=mobC;gene_biotype=protein_coding;locus_tag=AC56_RS11720;old_locus_tag=AC56_2282
NZ_JJLS01000194.1	Protein Homology	CDS	51268	52014	.	+	0	ID=cds-WP_000909124.1;Parent=gene-AC56_RS11720;Dbxref=GenBank:WP_000909124.1;Name=WP_000909124.1;gbkey=CDS;gene=mobC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227788.1;locus_tag=AC56_RS11720;product=MobC family replication-relaxation protein;protein_id=WP_000909124.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	52207	53151	.	-	.	ID=gene-AC56_RS11715;Name=AC56_RS11715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11715;old_locus_tag=AC56_2283
NZ_JJLS01000194.1	Protein Homology	CDS	52207	53151	.	-	0	ID=cds-WP_000155898.1;Parent=gene-AC56_RS11715;Dbxref=GenBank:WP_000155898.1;Name=WP_000155898.1;Ontology_term=GO:0003697,GO:0008237,GO:0008270;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227789.1;locus_tag=AC56_RS11715;product=ArdC family protein;protein_id=WP_000155898.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	53388	53621	.	+	.	ID=gene-AC56_RS0126295;Name=AC56_RS0126295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0126295
NZ_JJLS01000194.1	Protein Homology	CDS	53388	53621	.	+	0	ID=cds-WP_001446639.1;Parent=gene-AC56_RS0126295;Dbxref=GenBank:WP_001446639.1;Name=WP_001446639.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015935.6;locus_tag=AC56_RS0126295;product=JAB domain-containing protein;protein_id=WP_001446639.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	54157	55152	.	+	.	ID=gene-AC56_RS11710;Name=AC56_RS11710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11710;old_locus_tag=AC56_2285
NZ_JJLS01000194.1	Protein Homology	CDS	54157	55152	.	+	0	ID=cds-WP_000996055.1;Parent=gene-AC56_RS11710;Dbxref=GenBank:WP_000996055.1;Name=WP_000996055.1;Ontology_term=GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227790.1;locus_tag=AC56_RS11710;product=restriction endonuclease;protein_id=WP_000996055.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	55149	56237	.	+	.	ID=gene-AC56_RS11705;Name=AC56_RS11705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11705;old_locus_tag=AC56_2286
NZ_JJLS01000194.1	Protein Homology	CDS	55149	56237	.	+	0	ID=cds-WP_000127329.1;Parent=gene-AC56_RS11705;Dbxref=GenBank:WP_000127329.1;Name=WP_000127329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227791.1;locus_tag=AC56_RS11705;product=ABC-three component system protein;protein_id=WP_000127329.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	56234	56728	.	+	.	ID=gene-AC56_RS0126300;Name=AC56_RS0126300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0126300
NZ_JJLS01000194.1	Protein Homology	CDS	56234	56728	.	+	0	ID=cds-WP_000076577.1;Parent=gene-AC56_RS0126300;Dbxref=GenBank:WP_000076577.1;Name=WP_000076577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000076577.1;locus_tag=AC56_RS0126300;product=ABC-three component system middle component 2;protein_id=WP_000076577.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	56725	58605	.	+	.	ID=gene-AC56_RS11700;Name=AC56_RS11700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11700;old_locus_tag=AC56_2288
NZ_JJLS01000194.1	Protein Homology	CDS	56725	58605	.	+	0	ID=cds-WP_000214431.1;Parent=gene-AC56_RS11700;Dbxref=GenBank:WP_000214431.1;Name=WP_000214431.1;Ontology_term=GO:0006302,GO:0016887;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA;go_process=double-strand break repair|0006302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227793.1;locus_tag=AC56_RS11700;product=ATP-binding protein;protein_id=WP_000214431.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	58889	59908	.	-	.	ID=gene-AC56_RS11695;Name=AC56_RS11695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11695;old_locus_tag=AC56_2289
NZ_JJLS01000194.1	Protein Homology	CDS	58889	59908	.	-	0	ID=cds-WP_001119745.1;Parent=gene-AC56_RS11695;Dbxref=GenBank:WP_001119745.1;Name=WP_001119745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227794.1;locus_tag=AC56_RS11695;product=DUF4917 family protein;protein_id=WP_001119745.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	pseudogene	60036	60375	.	-	.	ID=gene-AC56_RS33940;Name=AC56_RS33940;end_range=60375,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33940;partial=true;pseudo=true;start_range=.,60036
NZ_JJLS01000194.1	Protein Homology	CDS	60036	60375	.	-	0	ID=cds-AC56_RS33940;Parent=gene-AC56_RS33940;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=60375,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001121399.1;locus_tag=AC56_RS33940;partial=true;product=IS630 family transposase;pseudo=true;start_range=.,60036;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	61307	61672	.	+	.	ID=gene-AC56_RS33945;Name=AC56_RS33945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33945
NZ_JJLS01000194.1	Protein Homology	CDS	61307	61672	.	+	0	ID=cds-WP_204361854.1;Parent=gene-AC56_RS33945;Dbxref=GenBank:WP_204361854.1;Name=WP_204361854.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024573.6;locus_tag=AC56_RS33945;product=AAA family ATPase;protein_id=WP_204361854.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	61590	63554	.	+	.	ID=gene-AC56_RS0126305;Name=AC56_RS0126305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0126305;old_locus_tag=AC56_2290
NZ_JJLS01000194.1	Protein Homology	CDS	61590	63554	.	+	0	ID=cds-WP_227528742.1;Parent=gene-AC56_RS0126305;Dbxref=GenBank:WP_227528742.1;Name=WP_227528742.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF038234.1;locus_tag=AC56_RS0126305;product=retron Eco8 family effector endonuclease;protein_id=WP_227528742.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	63669	64769	.	+	.	ID=gene-AC56_RS11690;Name=AC56_RS11690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11690;old_locus_tag=AC56_2291
NZ_JJLS01000194.1	Protein Homology	CDS	63669	64769	.	+	0	ID=cds-WP_000659976.1;Parent=gene-AC56_RS11690;Dbxref=GenBank:WP_000659976.1;Name=WP_000659976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227796.1;locus_tag=AC56_RS11690;product=reverse transcriptase domain-containing protein;protein_id=WP_000659976.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	pseudogene	65250	65405	.	+	.	ID=gene-AC56_RS32175;Name=AC56_RS32175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS32175;partial=true;pseudo=true;start_range=.,65250
NZ_JJLS01000194.1	Protein Homology	CDS	65250	65405	.	+	0	ID=cds-AC56_RS32175;Parent=gene-AC56_RS32175;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395480.1;locus_tag=AC56_RS32175;partial=true;product=IS630 family transposase;pseudo=true;start_range=.,65250;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	65425	66261	.	-	.	ID=gene-AC56_RS32775;Name=AC56_RS32775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS32775;old_locus_tag=AC56_2292
NZ_JJLS01000194.1	Protein Homology	CDS	65425	66261	.	-	0	ID=cds-WP_223175058.1;Parent=gene-AC56_RS32775;Dbxref=GenBank:WP_223175058.1;Name=WP_223175058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001446641.1;locus_tag=AC56_RS32775;product=hypothetical protein;protein_id=WP_223175058.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	66291	66542	.	-	.	ID=gene-AC56_RS0126320;Name=AC56_RS0126320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0126320
NZ_JJLS01000194.1	Protein Homology	CDS	66291	66542	.	-	0	ID=cds-WP_001287855.1;Parent=gene-AC56_RS0126320;Dbxref=GenBank:WP_001287855.1;Name=WP_001287855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001287855.1;locus_tag=AC56_RS0126320;product=hypothetical protein;protein_id=WP_001287855.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	pseudogene	66677	66808	.	-	.	ID=gene-AC56_RS31335;Name=AC56_RS31335;end_range=66808,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS31335;partial=true;pseudo=true
NZ_JJLS01000194.1	Protein Homology	CDS	66677	66808	.	-	0	ID=cds-AC56_RS31335;Parent=gene-AC56_RS31335;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=66808,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829140.1;locus_tag=AC56_RS31335;partial=true;product=phage virion morphogenesis protein;pseudo=true;transl_table=11
NZ_JJLS01000194.1	RefSeq	pseudogene	66757	67191	.	-	.	ID=gene-AC56_RS11685;Name=AC56_RS11685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS11685;old_locus_tag=AC56_2293;partial=true;pseudo=true;start_range=.,66757
NZ_JJLS01000194.1	Protein Homology	CDS	66757	67191	.	-	0	ID=cds-AC56_RS11685;Parent=gene-AC56_RS11685;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395480.1;locus_tag=AC56_RS11685;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,66757;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	67592	68866	.	+	.	ID=gene-AC56_RS11680;Name=AC56_RS11680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11680;old_locus_tag=AC56_2294
NZ_JJLS01000194.1	Protein Homology	CDS	67592	68866	.	+	0	ID=cds-WP_001548702.1;Parent=gene-AC56_RS11680;Dbxref=GenBank:WP_001548702.1;Name=WP_001548702.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751368.1;locus_tag=AC56_RS11680;product=tyrosine-type recombinase/integrase;protein_id=WP_001548702.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	68913	70301	.	-	.	ID=gene-AC56_RS11675;Name=AC56_RS11675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11675;old_locus_tag=AC56_2295
NZ_JJLS01000194.1	Protein Homology	CDS	68913	70301	.	-	0	ID=cds-WP_032278458.1;Parent=gene-AC56_RS11675;Dbxref=GenBank:WP_032278458.1;Name=WP_032278458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020803150.1;locus_tag=AC56_RS11675;product=hypothetical protein;protein_id=WP_032278458.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	70495	72471	.	+	.	ID=gene-AC56_RS11670;Name=AC56_RS11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11670;old_locus_tag=AC56_2296
NZ_JJLS01000194.1	Protein Homology	CDS	70495	72471	.	+	0	ID=cds-WP_032278459.1;Parent=gene-AC56_RS11670;Dbxref=GenBank:WP_032278459.1;Name=WP_032278459.1;Ontology_term=GO:0006306,GO:0009307,GO:0003677,GO:0008168,GO:0008170,GO:1904047;gbkey=CDS;go_function=DNA binding|0003677||IEA,methyltransferase activity|0008168||IEA,N-methyltransferase activity|0008170||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=obsolete DNA methylation|0006306||IEA,DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004864307.1;locus_tag=AC56_RS11670;product=site-specific DNA-methyltransferase;protein_id=WP_032278459.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	72481	75441	.	+	.	ID=gene-AC56_RS11665;Name=AC56_RS11665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11665;old_locus_tag=AC56_2297
NZ_JJLS01000194.1	Protein Homology	CDS	72481	75441	.	+	0	ID=cds-WP_032278460.1;Parent=gene-AC56_RS11665;Dbxref=GenBank:WP_032278460.1;Name=WP_032278460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751376.1;locus_tag=AC56_RS11665;product=type III restriction-modification system endonuclease;protein_id=WP_032278460.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	75599	77080	.	-	.	ID=gene-AC56_RS11660;Name=pilV;gbkey=Gene;gene=pilV;gene_biotype=protein_coding;locus_tag=AC56_RS11660;old_locus_tag=AC56_2298
NZ_JJLS01000194.1	Protein Homology	CDS	75599	77080	.	-	0	ID=cds-WP_236653782.1;Parent=gene-AC56_RS11660;Dbxref=GenBank:WP_236653782.1;Name=WP_236653782.1;gbkey=CDS;gene=pilV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000581382.1;locus_tag=AC56_RS11660;product=shufflon system plasmid conjugative transfer pilus tip adhesin PilV;protein_id=WP_236653782.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	77243	77812	.	-	.	ID=gene-AC56_RS0126325;Name=AC56_RS0126325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0126325
NZ_JJLS01000194.1	Protein Homology	CDS	77243	77812	.	-	0	ID=cds-WP_032278462.1;Parent=gene-AC56_RS0126325;Dbxref=GenBank:WP_032278462.1;Name=WP_032278462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151475.1;locus_tag=AC56_RS0126325;product=type 4 pilus major pilin;protein_id=WP_032278462.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	78149	78472	.	-	.	ID=gene-AC56_RS0126330;Name=AC56_RS0126330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0126330
NZ_JJLS01000194.1	Protein Homology	CDS	78149	78472	.	-	0	ID=cds-WP_032278463.1;Parent=gene-AC56_RS0126330;Dbxref=GenBank:WP_032278463.1;Name=WP_032278463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151476.1;locus_tag=AC56_RS0126330;product=conjugal transfer protein TraD;protein_id=WP_032278463.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	gene	78556	79071	.	-	.	ID=gene-AC56_RS11655;Name=AC56_RS11655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11655;old_locus_tag=AC56_2301
NZ_JJLS01000194.1	Protein Homology	CDS	78556	79071	.	-	0	ID=cds-WP_032278464.1;Parent=gene-AC56_RS11655;Dbxref=GenBank:WP_032278464.1;Name=WP_032278464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020246307.1;locus_tag=AC56_RS11655;product=hypothetical protein;protein_id=WP_032278464.1;transl_table=11
NZ_JJLS01000194.1	RefSeq	pseudogene	79330	79730	.	+	.	ID=gene-AC56_RS0126335;Name=AC56_RS0126335;end_range=79730,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0126335;partial=true;pseudo=true
NZ_JJLS01000194.1	Protein Homology	CDS	79330	79730	.	+	0	ID=cds-AC56_RS0126335;Parent=gene-AC56_RS0126335;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=79730,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS0126335;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000195.1 1 13966
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000195.1	RefSeq	region	1	13966	.	+	.	ID=NZ_JJLS01000195.1:1..13966;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000195.1	RefSeq	gene	1	263	.	+	.	ID=gene-AC56_RS11650;Name=AC56_RS11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11650;old_locus_tag=AC56_2304;partial=true;start_range=.,1
NZ_JJLS01000195.1	Protein Homology	CDS	1	263	.	+	2	ID=cds-WP_032277763.1;Parent=gene-AC56_RS11650;Dbxref=GenBank:WP_032277763.1;Name=WP_032277763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS11650;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032277763.1;start_range=.,1;transl_table=11
NZ_JJLS01000195.1	RefSeq	gene	534	809	.	-	.	ID=gene-AC56_RS0126345;Name=AC56_RS0126345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0126345
NZ_JJLS01000195.1	Protein Homology	CDS	534	809	.	-	0	ID=cds-WP_001515492.1;Parent=gene-AC56_RS0126345;Dbxref=GenBank:WP_001515492.1;Name=WP_001515492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151481.1;locus_tag=AC56_RS0126345;product=hypothetical protein;protein_id=WP_001515492.1;transl_table=11
NZ_JJLS01000195.1	RefSeq	gene	819	1370	.	-	.	ID=gene-AC56_RS11645;Name=AC56_RS11645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11645;old_locus_tag=AC56_2306
NZ_JJLS01000195.1	Protein Homology	CDS	819	1370	.	-	0	ID=cds-WP_032278470.1;Parent=gene-AC56_RS11645;Dbxref=GenBank:WP_032278470.1;Name=WP_032278470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008499886.1;locus_tag=AC56_RS11645;product=lipoprotein;protein_id=WP_032278470.1;transl_table=11
NZ_JJLS01000195.1	RefSeq	gene	1386	1952	.	-	.	ID=gene-AC56_RS11640;Name=AC56_RS11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11640;old_locus_tag=AC56_2307
NZ_JJLS01000195.1	Protein Homology	CDS	1386	1952	.	-	0	ID=cds-WP_032278471.1;Parent=gene-AC56_RS11640;Dbxref=GenBank:WP_032278471.1;Name=WP_032278471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001386505.1;locus_tag=AC56_RS11640;product=hypothetical protein;protein_id=WP_032278471.1;transl_table=11
NZ_JJLS01000195.1	RefSeq	gene	2458	2790	.	-	.	ID=gene-AC56_RS0126350;Name=AC56_RS0126350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0126350
NZ_JJLS01000195.1	Protein Homology	CDS	2458	2790	.	-	0	ID=cds-WP_032278472.1;Parent=gene-AC56_RS0126350;Dbxref=GenBank:WP_032278472.1;Name=WP_032278472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020806197.1;locus_tag=AC56_RS0126350;product=hypothetical protein;protein_id=WP_032278472.1;transl_table=11
NZ_JJLS01000195.1	RefSeq	gene	4011	4580	.	+	.	ID=gene-AC56_RS0126355;Name=AC56_RS0126355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0126355
NZ_JJLS01000195.1	Protein Homology	CDS	4011	4580	.	+	0	ID=cds-WP_001548721.1;Parent=gene-AC56_RS0126355;Dbxref=GenBank:WP_001548721.1;Name=WP_001548721.1;Ontology_term=GO:0006260,GO:0006276;gbkey=CDS;go_process=DNA replication|0006260||IEA,plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001548721.1;locus_tag=AC56_RS0126355;product=replication/maintenance protein RepL;protein_id=WP_001548721.1;transl_table=11
NZ_JJLS01000195.1	RefSeq	gene	4577	5368	.	+	.	ID=gene-AC56_RS11635;Name=AC56_RS11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11635;old_locus_tag=AC56_2311
NZ_JJLS01000195.1	Protein Homology	CDS	4577	5368	.	+	0	ID=cds-WP_032278473.1;Parent=gene-AC56_RS11635;Dbxref=GenBank:WP_032278473.1;Name=WP_032278473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001548722.1;locus_tag=AC56_RS11635;product=hypothetical protein;protein_id=WP_032278473.1;transl_table=11
NZ_JJLS01000195.1	RefSeq	gene	5673	5966	.	+	.	ID=gene-AC56_RS11630;Name=AC56_RS11630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11630;old_locus_tag=AC56_2312
NZ_JJLS01000195.1	Protein Homology	CDS	5673	5966	.	+	0	ID=cds-WP_032278474.1;Parent=gene-AC56_RS11630;Dbxref=GenBank:WP_032278474.1;Name=WP_032278474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239711.1;locus_tag=AC56_RS11630;product=hypothetical protein;protein_id=WP_032278474.1;transl_table=11
NZ_JJLS01000195.1	RefSeq	gene	6188	6655	.	+	.	ID=gene-AC56_RS11625;Name=AC56_RS11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11625;old_locus_tag=AC56_2313
NZ_JJLS01000195.1	Protein Homology	CDS	6188	6655	.	+	0	ID=cds-WP_032278476.1;Parent=gene-AC56_RS11625;Dbxref=GenBank:WP_032278476.1;Name=WP_032278476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001233363.1;locus_tag=AC56_RS11625;product=DUF4756 family protein;protein_id=WP_032278476.1;transl_table=11
NZ_JJLS01000195.1	RefSeq	gene	6810	7214	.	+	.	ID=gene-AC56_RS11620;Name=AC56_RS11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11620;old_locus_tag=AC56_2314
NZ_JJLS01000195.1	Protein Homology	CDS	6810	7214	.	+	0	ID=cds-WP_020239709.1;Parent=gene-AC56_RS11620;Dbxref=GenBank:WP_020239709.1;Name=WP_020239709.1;Ontology_term=GO:0006355,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519859.1;locus_tag=AC56_RS11620;product=H-NS family nucleoid-associated regulatory protein;protein_id=WP_020239709.1;transl_table=11
NZ_JJLS01000195.1	RefSeq	gene	8133	8513	.	-	.	ID=gene-AC56_RS0126360;Name=AC56_RS0126360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0126360
NZ_JJLS01000195.1	Protein Homology	CDS	8133	8513	.	-	0	ID=cds-WP_000711007.1;Parent=gene-AC56_RS0126360;Dbxref=GenBank:WP_000711007.1;Name=WP_000711007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151487.1;locus_tag=AC56_RS0126360;product=hypothetical protein;protein_id=WP_000711007.1;transl_table=11
NZ_JJLS01000195.1	RefSeq	gene	8562	8852	.	-	.	ID=gene-AC56_RS11615;Name=AC56_RS11615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11615;old_locus_tag=AC56_2316
NZ_JJLS01000195.1	Protein Homology	CDS	8562	8852	.	-	0	ID=cds-WP_032278480.1;Parent=gene-AC56_RS11615;Dbxref=GenBank:WP_032278480.1;Name=WP_032278480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014907311.1;locus_tag=AC56_RS11615;product=hypothetical protein;protein_id=WP_032278480.1;transl_table=11
NZ_JJLS01000195.1	RefSeq	gene	8931	9242	.	-	.	ID=gene-AC56_RS11610;Name=AC56_RS11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11610;old_locus_tag=AC56_2317
NZ_JJLS01000195.1	Protein Homology	CDS	8931	9242	.	-	0	ID=cds-WP_032260077.1;Parent=gene-AC56_RS11610;Dbxref=GenBank:WP_032260077.1;Name=WP_032260077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001400549.1;locus_tag=AC56_RS11610;product=hypothetical protein;protein_id=WP_032260077.1;transl_table=11
NZ_JJLS01000195.1	RefSeq	gene	9256	9585	.	-	.	ID=gene-AC56_RS11605;Name=AC56_RS11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11605;old_locus_tag=AC56_2318
NZ_JJLS01000195.1	Protein Homology	CDS	9256	9585	.	-	0	ID=cds-WP_032260079.1;Parent=gene-AC56_RS11605;Dbxref=GenBank:WP_032260079.1;Name=WP_032260079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324315.1;locus_tag=AC56_RS11605;product=hypothetical protein;protein_id=WP_032260079.1;transl_table=11
NZ_JJLS01000195.1	RefSeq	gene	9601	9819	.	-	.	ID=gene-AC56_RS11600;Name=AC56_RS11600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11600;old_locus_tag=AC56_2319
NZ_JJLS01000195.1	Protein Homology	CDS	9601	9819	.	-	0	ID=cds-WP_002911792.1;Parent=gene-AC56_RS11600;Dbxref=GenBank:WP_002911792.1;Name=WP_002911792.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001588069.1;locus_tag=AC56_RS11600;product=helix-turn-helix transcriptional regulator;protein_id=WP_002911792.1;transl_table=11
NZ_JJLS01000195.1	RefSeq	gene	10005	10868	.	-	.	ID=gene-AC56_RS11595;Name=AC56_RS11595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11595;old_locus_tag=AC56_2320
NZ_JJLS01000195.1	Protein Homology	CDS	10005	10868	.	-	0	ID=cds-WP_032278482.1;Parent=gene-AC56_RS11595;Dbxref=GenBank:WP_032278482.1;Name=WP_032278482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000211445.1;locus_tag=AC56_RS11595;product=DUF6387 family protein;protein_id=WP_032278482.1;transl_table=11
NZ_JJLS01000195.1	RefSeq	gene	11308	12255	.	-	.	ID=gene-AC56_RS11590;Name=cbl;gbkey=Gene;gene=cbl;gene_biotype=protein_coding;locus_tag=AC56_RS11590;old_locus_tag=AC56_2322
NZ_JJLS01000195.1	Protein Homology	CDS	11308	12255	.	-	0	ID=cds-WP_032278484.1;Parent=gene-AC56_RS11590;Dbxref=GenBank:WP_032278484.1;Name=WP_032278484.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cbl;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310810.1;locus_tag=AC56_RS11590;product=HTH-type transcriptional regulator Cbl;protein_id=WP_032278484.1;transl_table=11
NZ_JJLS01000195.1	RefSeq	gene	12357	13274	.	-	.	ID=gene-AC56_RS11585;Name=nac;gbkey=Gene;gene=nac;gene_biotype=protein_coding;locus_tag=AC56_RS11585;old_locus_tag=AC56_2323
NZ_JJLS01000195.1	Protein Homology	CDS	12357	13274	.	-	0	ID=cds-WP_001011466.1;Parent=gene-AC56_RS11585;Dbxref=GenBank:WP_001011466.1;Name=WP_001011466.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nac;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310811.1;locus_tag=AC56_RS11585;product=nitrogen assimilation transcriptional regulator NAC;protein_id=WP_001011466.1;transl_table=11
NZ_JJLS01000195.1	RefSeq	gene	13601	13676	.	+	.	ID=gene-AC56_RS11580;Name=AC56_RS11580;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS11580;old_locus_tag=AC56_2324
NZ_JJLS01000195.1	tRNAscan-SE	tRNA	13601	13676	.	+	.	ID=rna-AC56_RS11580;Parent=gene-AC56_RS11580;anticodon=(pos:13634..13636);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS11580;product=tRNA-Asn
NZ_JJLS01000195.1	tRNAscan-SE	exon	13601	13676	.	+	.	ID=exon-AC56_RS11580-1;Parent=rna-AC56_RS11580;anticodon=(pos:13634..13636);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS11580;product=tRNA-Asn
NZ_JJLS01000195.1	RefSeq	gene	13838	13966	.	+	.	ID=gene-AC56_RS31345;Name=AC56_RS31345;end_range=13966,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS31345;old_locus_tag=AC56_2325;partial=true
NZ_JJLS01000195.1	Protein Homology	CDS	13838	13966	.	+	0	ID=cds-WP_077746202.1;Parent=gene-AC56_RS31345;Dbxref=GenBank:WP_077746202.1;Name=WP_077746202.1;Ontology_term=GO:0003677;end_range=13966,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000055676.1;locus_tag=AC56_RS31345;partial=true;product=Arm DNA-binding domain-containing protein;protein_id=WP_077746202.1;transl_table=11
##sequence-region NZ_JJLS01000196.1 1 14890
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000196.1	RefSeq	region	1	14890	.	+	.	ID=NZ_JJLS01000196.1:1..14890;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000196.1	RefSeq	pseudogene	32	250	.	-	.	ID=gene-AC56_RS11575;Name=AC56_RS11575;end_range=250,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS11575;old_locus_tag=AC56_2326;partial=true;pseudo=true
NZ_JJLS01000196.1	Protein Homology	CDS	32	250	.	-	0	ID=cds-AC56_RS11575;Parent=gene-AC56_RS11575;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=250,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AC56_RS11575;partial=true;product=integrase core domain-containing protein;pseudo=true;transl_table=11
NZ_JJLS01000196.1	RefSeq	gene	334	759	.	+	.	ID=gene-AC56_RS11570;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AC56_RS11570;old_locus_tag=AC56_2327
NZ_JJLS01000196.1	Protein Homology	CDS	334	759	.	+	0	ID=cds-WP_032278491.1;Parent=gene-AC56_RS11570;Dbxref=GenBank:WP_032278491.1;Name=WP_032278491.1;gbkey=CDS;gene=tnpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001373091.1;locus_tag=AC56_RS11570;product=IS66-like element accessory protein TnpA;protein_id=WP_032278491.1;transl_table=11
NZ_JJLS01000196.1	RefSeq	gene	756	1046	.	+	.	ID=gene-AC56_RS11565;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AC56_RS11565;old_locus_tag=AC56_2328
NZ_JJLS01000196.1	Protein Homology	CDS	756	1046	.	+	0	ID=cds-WP_000624715.1;Parent=gene-AC56_RS11565;Dbxref=GenBank:WP_000624715.1;Name=WP_000624715.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311895.1;locus_tag=AC56_RS11565;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000624715.1;transl_table=11
NZ_JJLS01000196.1	RefSeq	gene	1298	2041	.	-	.	ID=gene-AC56_RS11560;Name=AC56_RS11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11560;old_locus_tag=AC56_2330
NZ_JJLS01000196.1	Protein Homology	CDS	1298	2041	.	-	0	ID=cds-WP_005067636.1;Parent=gene-AC56_RS11560;Dbxref=GenBank:WP_005067636.1;Name=WP_005067636.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005067636.1;locus_tag=AC56_RS11560;product=Crp/Fnr family transcriptional regulator;protein_id=WP_005067636.1;transl_table=11
NZ_JJLS01000196.1	RefSeq	gene	2091	3458	.	-	.	ID=gene-AC56_RS11555;Name=AC56_RS11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11555;old_locus_tag=AC56_2331
NZ_JJLS01000196.1	Protein Homology	CDS	2091	3458	.	-	0	ID=cds-WP_001139133.1;Parent=gene-AC56_RS11555;Dbxref=GenBank:WP_001139133.1;Name=WP_001139133.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001139133.1;locus_tag=AC56_RS11555;product=MFS transporter;protein_id=WP_001139133.1;transl_table=11
NZ_JJLS01000196.1	RefSeq	gene	3530	4642	.	-	.	ID=gene-AC56_RS11550;Name=AC56_RS11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11550;old_locus_tag=AC56_2332
NZ_JJLS01000196.1	Protein Homology	CDS	3530	4642	.	-	0	ID=cds-WP_000705119.1;Parent=gene-AC56_RS11550;Dbxref=GenBank:WP_000705119.1;Name=WP_000705119.1;Ontology_term=GO:0000287,GO:0003824;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000705119.1;locus_tag=AC56_RS11550;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=WP_000705119.1;transl_table=11
NZ_JJLS01000196.1	RefSeq	pseudogene	4823	5289	.	+	.	ID=gene-AC56_RS29630;Name=AC56_RS29630;end_range=5289,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS29630;partial=true;pseudo=true;start_range=.,4823
NZ_JJLS01000196.1	Protein Homology	CDS	4823	5289	.	+	0	ID=cds-AC56_RS29630;Parent=gene-AC56_RS29630;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=5289,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000058881.1;locus_tag=AC56_RS29630;partial=true;product=type I restriction endonuclease subunit R;pseudo=true;start_range=.,4823;transl_table=11
NZ_JJLS01000196.1	RefSeq	pseudogene	5374	5783	.	+	.	ID=gene-AC56_RS29640;Name=AC56_RS29640;end_range=5783,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS29640;partial=true;pseudo=true
NZ_JJLS01000196.1	Protein Homology	CDS	5374	5783	.	+	0	ID=cds-AC56_RS29640;Parent=gene-AC56_RS29640;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=5783,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243830.1;locus_tag=AC56_RS29640;partial=true;product=transposase;pseudo=true;transl_table=11
NZ_JJLS01000196.1	RefSeq	pseudogene	5889	7052	.	+	.	ID=gene-AC56_RS29645;Name=AC56_RS29645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS29645;pseudo=true
NZ_JJLS01000196.1	Protein Homology	CDS	5889	7052	.	+	0	ID=cds-AC56_RS29645;Parent=gene-AC56_RS29645;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611570.1;locus_tag=AC56_RS29645;product=IS3 family transposase;pseudo=true;transl_table=11
NZ_JJLS01000196.1	cmsearch	sequence_feature	6119	6235	.	+	.	ID=id-AC56_RS29645;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS29645;pseudo=true
NZ_JJLS01000196.1	RefSeq	gene	7304	8179	.	+	.	ID=gene-AC56_RS11525;Name=AC56_RS11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11525;old_locus_tag=AC56_2338
NZ_JJLS01000196.1	Protein Homology	CDS	7304	8179	.	+	0	ID=cds-WP_032173403.1;Parent=gene-AC56_RS11525;Dbxref=GenBank:WP_032173403.1;Name=WP_032173403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367684.1;locus_tag=AC56_RS11525;product=LysR family transcriptional regulator;protein_id=WP_032173403.1;transl_table=11
NZ_JJLS01000196.1	RefSeq	gene	8251	9639	.	-	.	ID=gene-AC56_RS11520;Name=AC56_RS11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11520;old_locus_tag=AC56_2339
NZ_JJLS01000196.1	Protein Homology	CDS	8251	9639	.	-	0	ID=cds-WP_032173404.1;Parent=gene-AC56_RS11520;Dbxref=GenBank:WP_032173404.1;Name=WP_032173404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015871446.1;locus_tag=AC56_RS11520;product=MmgE/PrpD family protein;protein_id=WP_032173404.1;transl_table=11
NZ_JJLS01000196.1	RefSeq	gene	9777	11141	.	-	.	ID=gene-AC56_RS11515;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=AC56_RS11515;old_locus_tag=AC56_2340
NZ_JJLS01000196.1	Protein Homology	CDS	9777	11141	.	-	0	ID=cds-WP_023149958.1;Parent=gene-AC56_RS11515;Dbxref=GenBank:WP_023149958.1;Name=WP_023149958.1;Ontology_term=GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013366026.1;locus_tag=AC56_RS11515;product=adenylosuccinate lyase;protein_id=WP_023149958.1;transl_table=11
NZ_JJLS01000196.1	RefSeq	gene	11629	12801	.	+	.	ID=gene-AC56_RS11510;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=AC56_RS11510;old_locus_tag=AC56_2341
NZ_JJLS01000196.1	Protein Homology	CDS	11629	12801	.	+	0	ID=cds-WP_024166501.1;Parent=gene-AC56_RS11510;Dbxref=GenBank:WP_024166501.1;Name=WP_024166501.1;Ontology_term=GO:0009086,GO:0047804;gbkey=CDS;gene=metC;go_function=cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013366025.1;locus_tag=AC56_RS11510;product=cystathionine beta-lyase;protein_id=WP_024166501.1;transl_table=11
NZ_JJLS01000196.1	RefSeq	gene	12873	14240	.	+	.	ID=gene-AC56_RS11505;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=AC56_RS11505;old_locus_tag=AC56_2342
NZ_JJLS01000196.1	Protein Homology	CDS	12873	14240	.	+	0	ID=cds-WP_023149960.1;Parent=gene-AC56_RS11505;Dbxref=GenBank:WP_023149960.1;Name=WP_023149960.1;Ontology_term=GO:0015740,GO:0015556,GO:0016020;gbkey=CDS;gene=dcuC;go_component=membrane|0016020||IEA;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013366024.1;locus_tag=AC56_RS11505;product=C4-dicarboxylate transporter DcuC;protein_id=WP_023149960.1;transl_table=11
NZ_JJLS01000196.1	RefSeq	gene	14555	14890	.	+	.	ID=gene-AC56_RS11500;Name=AC56_RS11500;end_range=14890,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11500;old_locus_tag=AC56_2343;partial=true
NZ_JJLS01000196.1	Protein Homology	CDS	14555	14890	.	+	0	ID=cds-WP_032277790.1;Parent=gene-AC56_RS11500;Dbxref=GenBank:WP_032277790.1;Name=WP_032277790.1;end_range=14890,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS11500;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032277790.1;transl_table=11
##sequence-region NZ_JJLS01000197.1 1 1735
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000197.1	RefSeq	region	1	1735	.	+	.	ID=NZ_JJLS01000197.1:1..1735;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000197.1	RefSeq	pseudogene	1	573	.	-	.	ID=gene-AC56_RS32185;Name=AC56_RS32185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS32185;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000197.1	Protein Homology	CDS	1	573	.	-	0	ID=cds-AC56_RS32185;Parent=gene-AC56_RS32185;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AC56_RS32185;partial=true;product=transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000197.1	cmsearch	sequence_feature	176	292	.	-	.	ID=id-AC56_RS32185;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS32185;pseudo=true
NZ_JJLS01000197.1	RefSeq	pseudogene	666	1334	.	+	.	ID=gene-AC56_RS11485;Name=tnpC;end_range=1334,.;gbkey=Gene;gene=tnpC;gene_biotype=pseudogene;locus_tag=AC56_RS11485;old_locus_tag=AC56_2346;partial=true;pseudo=true;start_range=.,666
NZ_JJLS01000197.1	Protein Homology	CDS	666	1334	.	+	0	ID=cds-AC56_RS11485;Parent=gene-AC56_RS11485;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0004803;end_range=1334,.;gbkey=CDS;gene=tnpC;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080164.1;locus_tag=AC56_RS11485;partial=true;product=IS66 family transposase;pseudo=true;start_range=.,666;transl_table=11
NZ_JJLS01000197.1	RefSeq	gene	1505	1735	.	-	.	ID=gene-AC56_RS11480;Name=AC56_RS11480;end_range=1735,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11480;old_locus_tag=AC56_2347;partial=true
NZ_JJLS01000197.1	Protein Homology	CDS	1505	1735	.	-	0	ID=cds-WP_001352175.1-2;Parent=gene-AC56_RS11480;Dbxref=GenBank:WP_001352175.1;Name=WP_001352175.1;end_range=1735,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS11480;partial=true;product=IS4 family transposase;protein_id=WP_001352175.1;transl_table=11
##sequence-region NZ_JJLS01000198.1 1 6570
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000198.1	RefSeq	region	1	6570	.	+	.	ID=NZ_JJLS01000198.1:1..6570;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000198.1	RefSeq	pseudogene	1	465	.	+	.	ID=gene-AC56_RS0126385;Name=AC56_RS0126385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0126385;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000198.1	Protein Homology	CDS	1	465	.	+	0	ID=cds-AC56_RS0126385;Parent=gene-AC56_RS0126385;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS0126385;partial=true;product=IS5-like element ISKpn26 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000198.1	RefSeq	gene	447	674	.	+	.	ID=gene-AC56_RS33770;Name=AC56_RS33770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33770
NZ_JJLS01000198.1	Protein Homology	CDS	447	674	.	+	0	ID=cds-WP_349237783.1;Parent=gene-AC56_RS33770;Dbxref=GenBank:WP_349237783.1;Name=WP_349237783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001340384.1;locus_tag=AC56_RS33770;product=hypothetical protein;protein_id=WP_349237783.1;transl_table=11
NZ_JJLS01000198.1	RefSeq	gene	678	2081	.	+	.	ID=gene-AC56_RS11475;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=AC56_RS11475;old_locus_tag=AC56_2349
NZ_JJLS01000198.1	Protein Homology	CDS	678	2081	.	+	0	ID=cds-WP_032277979.1;Parent=gene-AC56_RS11475;Dbxref=GenBank:WP_032277979.1;Name=WP_032277979.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012905714.1;locus_tag=AC56_RS11475;product=class II fumarate hydratase;protein_id=WP_032277979.1;transl_table=11
NZ_JJLS01000198.1	RefSeq	gene	2347	2844	.	-	.	ID=gene-AC56_RS11470;Name=AC56_RS11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11470;old_locus_tag=AC56_2350
NZ_JJLS01000198.1	Protein Homology	CDS	2347	2844	.	-	0	ID=cds-WP_077695120.1;Parent=gene-AC56_RS11470;Dbxref=GenBank:WP_077695120.1;Name=WP_077695120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652429.1;locus_tag=AC56_RS11470;product=putative zinc ribbon protein;protein_id=WP_077695120.1;transl_table=11
NZ_JJLS01000198.1	RefSeq	pseudogene	2959	4154	.	-	.	ID=gene-AC56_RS31355;Name=AC56_RS31355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS31355;old_locus_tag=AC56_2351;pseudo=true
NZ_JJLS01000198.1	Protein Homology	CDS	2959	4154	.	-	0	ID=cds-AC56_RS31355;Parent=gene-AC56_RS31355;Note=frameshifted;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001297906.1;locus_tag=AC56_RS31355;product=IS110-like element ISEc20 family transposase;pseudo=true;transl_table=11
NZ_JJLS01000198.1	RefSeq	gene	4601	4894	.	-	.	ID=gene-AC56_RS0126400;Name=AC56_RS0126400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0126400;old_locus_tag=AC56_2353
NZ_JJLS01000198.1	GeneMarkS-2+	CDS	4601	4894	.	-	0	ID=cds-WP_023149966.1;Parent=gene-AC56_RS0126400;Dbxref=GenBank:WP_023149966.1;Name=WP_023149966.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS0126400;product=hypothetical protein;protein_id=WP_023149966.1;transl_table=11
NZ_JJLS01000198.1	RefSeq	pseudogene	4908	5033	.	+	.	ID=gene-AC56_RS29665;Name=AC56_RS29665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS29665;old_locus_tag=AC56_2354;partial=true;pseudo=true;start_range=.,4908
NZ_JJLS01000198.1	Protein Homology	CDS	4908	5033	.	+	0	ID=cds-AC56_RS29665;Parent=gene-AC56_RS29665;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080164.1;locus_tag=AC56_RS29665;partial=true;product=transposase domain-containing protein;pseudo=true;start_range=.,4908;transl_table=11
NZ_JJLS01000198.1	RefSeq	pseudogene	5063	5176	.	-	.	ID=gene-AC56_RS29670;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=pseudogene;locus_tag=AC56_RS29670;old_locus_tag=AC56_2355;partial=true;pseudo=true;start_range=.,5063
NZ_JJLS01000198.1	Protein Homology	CDS	5063	5176	.	-	0	ID=cds-AC56_RS29670;Parent=gene-AC56_RS29670;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858246.1;locus_tag=AC56_RS29670;partial=true;product=IS66 family insertion sequence element accessory protein TnpB;pseudo=true;start_range=.,5063;transl_table=11
NZ_JJLS01000198.1	RefSeq	gene	5602	5763	.	-	.	ID=gene-AC56_RS33330;Name=AC56_RS33330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33330
NZ_JJLS01000198.1	GeneMarkS-2+	CDS	5602	5763	.	-	0	ID=cds-WP_248790149.1;Parent=gene-AC56_RS33330;Dbxref=GenBank:WP_248790149.1;Name=WP_248790149.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS33330;product=hypothetical protein;protein_id=WP_248790149.1;transl_table=11
NZ_JJLS01000198.1	RefSeq	gene	5938	6570	.	+	.	ID=gene-AC56_RS11465;Name=AC56_RS11465;end_range=6570,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11465;old_locus_tag=AC56_2357;partial=true
NZ_JJLS01000198.1	Protein Homology	CDS	5938	6187	.	+	0	ID=cds-WP_248790150.1;Parent=gene-AC56_RS11465;Dbxref=GenBank:WP_248790150.1;Name=WP_248790150.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=AC56_RS11465;partial=true;product=IS1 family transposase;protein_id=WP_248790150.1;transl_table=11
NZ_JJLS01000198.1	Protein Homology	CDS	6187	6570	.	+	2	ID=cds-WP_248790150.1;Parent=gene-AC56_RS11465;Dbxref=GenBank:WP_248790150.1;Name=WP_248790150.1;Note=programmed frameshift;Ontology_term=GO:0004803;end_range=6570,.;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=AC56_RS11465;partial=true;product=IS1 family transposase;protein_id=WP_248790150.1;transl_table=11
##sequence-region NZ_JJLS01000199.1 1 3159
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000199.1	RefSeq	region	1	3159	.	+	.	ID=NZ_JJLS01000199.1:1..3159;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000199.1	RefSeq	gene	56	753	.	+	.	ID=gene-AC56_RS11460;Name=AC56_RS11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11460;old_locus_tag=AC56_2358
NZ_JJLS01000199.1	Protein Homology	CDS	56	305	.	+	0	ID=cds-WP_236165453.1-3;Parent=gene-AC56_RS11460;Dbxref=GenBank:WP_236165453.1;Name=WP_236165453.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558270.1;locus_tag=AC56_RS11460;product=IS1 family transposase;protein_id=WP_236165453.1;transl_table=11
NZ_JJLS01000199.1	Protein Homology	CDS	305	753	.	+	2	ID=cds-WP_236165453.1-3;Parent=gene-AC56_RS11460;Dbxref=GenBank:WP_236165453.1;Name=WP_236165453.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558270.1;locus_tag=AC56_RS11460;product=IS1 family transposase;protein_id=WP_236165453.1;transl_table=11
NZ_JJLS01000199.1	RefSeq	pseudogene	1021	1119	.	-	.	ID=gene-AC56_RS32785;Name=AC56_RS32785;end_range=1119,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS32785;old_locus_tag=AC56_2359;partial=true;pseudo=true;start_range=.,1021
NZ_JJLS01000199.1	Protein Homology	CDS	1021	1119	.	-	0	ID=cds-AC56_RS32785;Parent=gene-AC56_RS32785;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1119,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080164.1;locus_tag=AC56_RS32785;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1021;transl_table=11
NZ_JJLS01000199.1	RefSeq	pseudogene	1168	2787	.	-	.	ID=gene-AC56_RS29690;Name=AC56_RS29690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS29690;pseudo=true
NZ_JJLS01000199.1	Protein Homology	CDS	1168	2787	.	-	0	ID=cds-AC56_RS29690;Parent=gene-AC56_RS29690;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001368704.1;locus_tag=AC56_RS29690;product=ISL3 family transposase;pseudo=true;transl_table=11
NZ_JJLS01000199.1	RefSeq	pseudogene	2873	3159	.	+	.	ID=gene-AC56_RS29695;Name=AC56_RS29695;end_range=3159,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS29695;old_locus_tag=AC56_2361;partial=true;pseudo=true;start_range=.,2873
NZ_JJLS01000199.1	Protein Homology	CDS	2873	3159	.	+	0	ID=cds-AC56_RS29695;Parent=gene-AC56_RS29695;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3159,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000998048.1;locus_tag=AC56_RS29695;partial=true;product=IS66 family transposase;pseudo=true;start_range=.,2873;transl_table=11
##sequence-region NZ_JJLS01000200.1 1 8870
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000200.1	RefSeq	region	1	8870	.	+	.	ID=NZ_JJLS01000200.1:1..8870;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000200.1	RefSeq	pseudogene	1	92	.	-	.	ID=gene-AC56_RS29700;Name=AC56_RS29700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS29700;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000200.1	Protein Homology	CDS	1	92	.	-	0	ID=cds-AC56_RS29700;Parent=gene-AC56_RS29700;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858246.1;locus_tag=AC56_RS29700;partial=true;product=IS66 family insertion sequence element accessory protein TnpB;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000200.1	RefSeq	gene	89	469	.	-	.	ID=gene-AC56_RS11455;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AC56_RS11455;old_locus_tag=AC56_2362
NZ_JJLS01000200.1	Protein Homology	CDS	89	469	.	-	0	ID=cds-WP_001171523.1;Parent=gene-AC56_RS11455;Dbxref=GenBank:WP_001171523.1;Name=WP_001171523.1;gbkey=CDS;gene=tnpA;inference=COORDINATES: protein motif:HMM:NF047595.1;locus_tag=AC56_RS11455;product=IS66-like element accessory protein TnpA;protein_id=WP_001171523.1;transl_table=11
NZ_JJLS01000200.1	RefSeq	gene	824	1258	.	-	.	ID=gene-AC56_RS11450;Name=AC56_RS11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11450;old_locus_tag=AC56_2364
NZ_JJLS01000200.1	Protein Homology	CDS	824	1258	.	-	0	ID=cds-WP_001221615.1;Parent=gene-AC56_RS11450;Dbxref=GenBank:WP_001221615.1;Name=WP_001221615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001556209.1;locus_tag=AC56_RS11450;product=zinc-ribbon domain-containing protein;protein_id=WP_001221615.1;transl_table=11
NZ_JJLS01000200.1	RefSeq	gene	1246	1647	.	-	.	ID=gene-AC56_RS11445;Name=AC56_RS11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11445;old_locus_tag=AC56_2365
NZ_JJLS01000200.1	Protein Homology	CDS	1246	1647	.	-	0	ID=cds-WP_001620683.1;Parent=gene-AC56_RS11445;Dbxref=GenBank:WP_001620683.1;Name=WP_001620683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004020115.1;locus_tag=AC56_RS11445;product=putative zinc ribbon protein;protein_id=WP_001620683.1;transl_table=11
NZ_JJLS01000200.1	RefSeq	gene	1907	2476	.	-	.	ID=gene-AC56_RS11440;Name=AC56_RS11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11440;old_locus_tag=AC56_2366
NZ_JJLS01000200.1	Protein Homology	CDS	1907	2476	.	-	0	ID=cds-WP_000221515.1;Parent=gene-AC56_RS11440;Dbxref=GenBank:WP_000221515.1;Name=WP_000221515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000221568.1;locus_tag=AC56_RS11440;product=inovirus Gp2 family protein;protein_id=WP_000221515.1;transl_table=11
NZ_JJLS01000200.1	RefSeq	gene	2676	2876	.	+	.	ID=gene-AC56_RS33335;Name=AC56_RS33335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33335
NZ_JJLS01000200.1	Protein Homology	CDS	2676	2876	.	+	0	ID=cds-WP_001297900.1;Parent=gene-AC56_RS33335;Dbxref=GenBank:WP_001297900.1;Name=WP_001297900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001297900.1;locus_tag=AC56_RS33335;product=hypothetical protein;protein_id=WP_001297900.1;transl_table=11
NZ_JJLS01000200.1	RefSeq	gene	3090	3257	.	-	.	ID=gene-AC56_RS33775;Name=AC56_RS33775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33775
NZ_JJLS01000200.1	Protein Homology	CDS	3090	3257	.	-	0	ID=cds-WP_001322502.1;Parent=gene-AC56_RS33775;Dbxref=GenBank:WP_001322502.1;Name=WP_001322502.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017162.6;locus_tag=AC56_RS33775;product=hypothetical protein;protein_id=WP_001322502.1;transl_table=11
NZ_JJLS01000200.1	RefSeq	gene	4000	4206	.	+	.	ID=gene-AC56_RS31375;Name=AC56_RS31375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS31375;old_locus_tag=AC56_2367
NZ_JJLS01000200.1	Protein Homology	CDS	4000	4206	.	+	0	ID=cds-WP_000235217.1;Parent=gene-AC56_RS31375;Dbxref=GenBank:WP_000235217.1;Name=WP_000235217.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020234041.1;locus_tag=AC56_RS31375;product=helix-turn-helix transcriptional regulator;protein_id=WP_000235217.1;transl_table=11
NZ_JJLS01000200.1	RefSeq	gene	4301	4903	.	+	.	ID=gene-AC56_RS11430;Name=AC56_RS11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11430;old_locus_tag=AC56_2368
NZ_JJLS01000200.1	Protein Homology	CDS	4301	4903	.	+	0	ID=cds-WP_000813451.1;Parent=gene-AC56_RS11430;Dbxref=GenBank:WP_000813451.1;Name=WP_000813451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001590672.1;locus_tag=AC56_RS11430;product=hypothetical protein;protein_id=WP_000813451.1;transl_table=11
NZ_JJLS01000200.1	RefSeq	gene	5225	6709	.	-	.	ID=gene-AC56_RS11425;Name=AC56_RS11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11425;old_locus_tag=AC56_2369
NZ_JJLS01000200.1	Protein Homology	CDS	5225	6709	.	-	0	ID=cds-WP_001297234.1;Parent=gene-AC56_RS11425;Dbxref=GenBank:WP_001297234.1;Name=WP_001297234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001405821.1;locus_tag=AC56_RS11425;product=YfjI family protein;protein_id=WP_001297234.1;transl_table=11
NZ_JJLS01000200.1	RefSeq	gene	7939	8811	.	+	.	ID=gene-AC56_RS11420;Name=AC56_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11420;old_locus_tag=AC56_2373
NZ_JJLS01000200.1	Protein Homology	CDS	7939	8811	.	+	0	ID=cds-WP_032282744.1;Parent=gene-AC56_RS11420;Dbxref=GenBank:WP_032282744.1;Name=WP_032282744.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309422.1;locus_tag=AC56_RS11420;product=GTPase family protein;protein_id=WP_032282744.1;transl_table=11
##sequence-region NZ_JJLS01000201.1 1 3591
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000201.1	RefSeq	region	1	3591	.	+	.	ID=NZ_JJLS01000201.1:1..3591;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000201.1	RefSeq	pseudogene	1	295	.	+	.	ID=gene-AC56_RS11415;Name=AC56_RS11415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS11415;old_locus_tag=AC56_2374;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000201.1	Protein Homology	CDS	1	295	.	+	1	ID=cds-AC56_RS11415;Parent=gene-AC56_RS11415;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708764.1;locus_tag=AC56_RS11415;partial=true;product=GTPase family protein;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000201.1	RefSeq	pseudogene	667	2895	.	+	.	ID=gene-AC56_RS11410;Name=AC56_RS11410;end_range=2895,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS11410;old_locus_tag=AC56_2376;partial=true;pseudo=true
NZ_JJLS01000201.1	Protein Homology	CDS	667	2895	.	+	0	ID=cds-AC56_RS11410;Parent=gene-AC56_RS11410;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2895,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309423.1;locus_tag=AC56_RS11410;partial=true;product=Ag43/Cah family autotransporter adhesin;pseudo=true;transl_table=11
NZ_JJLS01000201.1	RefSeq	gene	2937	3591	.	-	.	ID=gene-AC56_RS11405;Name=AC56_RS11405;end_range=3591,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11405;old_locus_tag=AC56_2377;partial=true
NZ_JJLS01000201.1	Protein Homology	CDS	2937	3591	.	-	1	ID=cds-WP_032277616.1-5;Parent=gene-AC56_RS11405;Dbxref=GenBank:WP_032277616.1;Name=WP_032277616.1;Ontology_term=GO:0004803;end_range=3591,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AC56_RS11405;partial=true;product=IS3 family transposase;protein_id=WP_032277616.1;transl_table=11
##sequence-region NZ_JJLS01000202.1 1 27848
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000202.1	RefSeq	region	1	27848	.	+	.	ID=NZ_JJLS01000202.1:1..27848;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000202.1	RefSeq	pseudogene	1	476	.	-	.	ID=gene-AC56_RS31380;Name=AC56_RS31380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS31380;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000202.1	Protein Homology	CDS	1	476	.	-	0	ID=cds-AC56_RS31380;Parent=gene-AC56_RS31380;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS31380;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000202.1	RefSeq	gene	641	1606	.	-	.	ID=gene-AC56_RS11395;Name=AC56_RS11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11395;old_locus_tag=AC56_2379
NZ_JJLS01000202.1	Protein Homology	CDS	641	1606	.	-	0	ID=cds-WP_000166120.1;Parent=gene-AC56_RS11395;Dbxref=GenBank:WP_000166120.1;Name=WP_000166120.1;Ontology_term=GO:0006355,GO:0003677,GO:0030246;gbkey=CDS;go_function=DNA binding|0003677||IEA,carbohydrate binding|0030246||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524950.1;locus_tag=AC56_RS11395;product=sugar-binding transcriptional regulator;protein_id=WP_000166120.1;transl_table=11
NZ_JJLS01000202.1	RefSeq	gene	1780	2706	.	-	.	ID=gene-AC56_RS11390;Name=ldtA;gbkey=Gene;gene=ldtA;gene_biotype=protein_coding;locus_tag=AC56_RS11390;old_locus_tag=AC56_2380
NZ_JJLS01000202.1	Protein Homology	CDS	1780	2706	.	-	0	ID=cds-WP_001515508.1;Parent=gene-AC56_RS11390;Dbxref=GenBank:WP_001515508.1;Name=WP_001515508.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001773987.1;locus_tag=AC56_RS11390;product=L%2CD-transpeptidase;protein_id=WP_001515508.1;transl_table=11
NZ_JJLS01000202.1	RefSeq	gene	2768	3847	.	-	.	ID=gene-AC56_RS11385;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=AC56_RS11385;old_locus_tag=AC56_2381
NZ_JJLS01000202.1	Protein Homology	CDS	2768	3847	.	-	0	ID=cds-WP_001193794.1;Parent=gene-AC56_RS11385;Dbxref=GenBank:WP_001193794.1;Name=WP_001193794.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310813.1;locus_tag=AC56_RS11385;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_001193794.1;transl_table=11
NZ_JJLS01000202.1	RefSeq	gene	3859	4602	.	-	.	ID=gene-AC56_RS11380;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=AC56_RS11380;old_locus_tag=AC56_2382
NZ_JJLS01000202.1	Protein Homology	CDS	3859	4602	.	-	0	ID=cds-WP_016242230.1;Parent=gene-AC56_RS11380;Dbxref=GenBank:WP_016242230.1;Name=WP_016242230.1;Ontology_term=GO:0009236,GO:0008818,GO:0051073;gbkey=CDS;gene=cobS;go_function=cobalamin 5'-phosphate synthase activity|0008818||IEA,adenosylcobinamide-GDP ribazoletransferase activity|0051073||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310814.1;locus_tag=AC56_RS11380;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WP_016242230.1;transl_table=11
NZ_JJLS01000202.1	RefSeq	gene	4599	5144	.	-	.	ID=gene-AC56_RS11375;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=AC56_RS11375;old_locus_tag=AC56_2383
NZ_JJLS01000202.1	Protein Homology	CDS	4599	5144	.	-	0	ID=cds-WP_000973159.1;Parent=gene-AC56_RS11375;Dbxref=GenBank:WP_000973159.1;Name=WP_000973159.1;Ontology_term=GO:0009236,GO:0000166,GO:0043752;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416497.1;locus_tag=AC56_RS11375;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WP_000973159.1;transl_table=11
NZ_JJLS01000202.1	RefSeq	pseudogene	5326	5502	.	+	.	ID=gene-AC56_RS32195;Name=AC56_RS32195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS32195;old_locus_tag=AC56_2384;partial=true;pseudo=true;start_range=.,5326
NZ_JJLS01000202.1	Protein Homology	CDS	5326	5502	.	+	0	ID=cds-AC56_RS32195;Parent=gene-AC56_RS32195;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006576,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=biogenic amine metabolic process|0006576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001585847.1;locus_tag=AC56_RS32195;partial=true;product=EutP/PduV family microcompartment system protein;pseudo=true;start_range=.,5326;transl_table=11
NZ_JJLS01000202.1	RefSeq	gene	5603	5932	.	-	.	ID=gene-AC56_RS11370;Name=tmaR;gbkey=Gene;gene=tmaR;gene_biotype=protein_coding;locus_tag=AC56_RS11370;old_locus_tag=AC56_2385
NZ_JJLS01000202.1	Protein Homology	CDS	5603	5932	.	-	0	ID=cds-WP_000450409.1;Parent=gene-AC56_RS11370;Dbxref=GenBank:WP_000450409.1;Name=WP_000450409.1;gbkey=CDS;gene=tmaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310836.2;locus_tag=AC56_RS11370;product=DUF496 family protein;protein_id=WP_000450409.1;transl_table=11
NZ_JJLS01000202.1	RefSeq	gene	6104	7162	.	-	.	ID=gene-AC56_RS11365;Name=yeeA;gbkey=Gene;gene=yeeA;gene_biotype=protein_coding;locus_tag=AC56_RS11365;old_locus_tag=AC56_2387
NZ_JJLS01000202.1	Protein Homology	CDS	6104	7162	.	-	0	ID=cds-WP_001200891.1;Parent=gene-AC56_RS11365;Dbxref=GenBank:WP_001200891.1;Name=WP_001200891.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;gene=yeeA;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416512.1;locus_tag=AC56_RS11365;product=FUSC family protein;protein_id=WP_001200891.1;transl_table=11
NZ_JJLS01000202.1	RefSeq	gene	7361	7834	.	-	.	ID=gene-AC56_RS11360;Name=sbmC;gbkey=Gene;gene=sbmC;gene_biotype=protein_coding;locus_tag=AC56_RS11360;old_locus_tag=AC56_2388
NZ_JJLS01000202.1	Protein Homology	CDS	7361	7834	.	-	0	ID=cds-WP_001105380.1;Parent=gene-AC56_RS11360;Dbxref=GenBank:WP_001105380.1;Name=WP_001105380.1;gbkey=CDS;gene=sbmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310838.1;locus_tag=AC56_RS11360;product=DNA gyrase inhibitor SbmC;protein_id=WP_001105380.1;transl_table=11
NZ_JJLS01000202.1	RefSeq	gene	7953	9119	.	-	.	ID=gene-AC56_RS11355;Name=dacD;gbkey=Gene;gene=dacD;gene_biotype=protein_coding;locus_tag=AC56_RS11355;old_locus_tag=AC56_2389
NZ_JJLS01000202.1	Protein Homology	CDS	7953	9119	.	-	0	ID=cds-WP_000830156.1;Parent=gene-AC56_RS11355;Dbxref=GenBank:WP_000830156.1;Name=WP_000830156.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacD;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416514.4;locus_tag=AC56_RS11355;product=serine-type D-Ala-D-Ala carboxypeptidase DacD;protein_id=WP_000830156.1;transl_table=11
NZ_JJLS01000202.1	RefSeq	gene	9328	10755	.	+	.	ID=gene-AC56_RS11350;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=AC56_RS11350;old_locus_tag=AC56_2390
NZ_JJLS01000202.1	Protein Homology	CDS	9328	10755	.	+	0	ID=cds-WP_000980610.1;Parent=gene-AC56_RS11350;Dbxref=GenBank:WP_000980610.1;Name=WP_000980610.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008310;gbkey=CDS;gene=sbcB;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,single-stranded DNA 3'-5' DNA exonuclease activity|0008310||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310840.1;locus_tag=AC56_RS11350;product=exodeoxyribonuclease I;protein_id=WP_000980610.1;transl_table=11
NZ_JJLS01000202.1	RefSeq	gene	10798	11025	.	-	.	ID=gene-AC56_RS11345;Name=tsuB;gbkey=Gene;gene=tsuB;gene_biotype=protein_coding;locus_tag=AC56_RS11345;old_locus_tag=AC56_2391
NZ_JJLS01000202.1	Protein Homology	CDS	10798	11025	.	-	0	ID=cds-WP_000985278.1;Parent=gene-AC56_RS11345;Dbxref=GenBank:WP_000985278.1;Name=WP_000985278.1;gbkey=CDS;gene=tsuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310841.1;locus_tag=AC56_RS11345;product=thiosulfate utilization sulfurtransferase TsuB/YeeD;protein_id=WP_000985278.1;transl_table=11
NZ_JJLS01000202.1	RefSeq	gene	11039	12097	.	-	.	ID=gene-AC56_RS11340;Name=tsuA;gbkey=Gene;gene=tsuA;gene_biotype=protein_coding;locus_tag=AC56_RS11340;old_locus_tag=AC56_2392
NZ_JJLS01000202.1	Protein Homology	CDS	11039	12097	.	-	0	ID=cds-WP_000492312.1;Parent=gene-AC56_RS11340;Dbxref=GenBank:WP_000492312.1;Name=WP_000492312.1;gbkey=CDS;gene=tsuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416517.1;locus_tag=AC56_RS11340;product=thiosulfate utilization transporter TsuA/YeeE;protein_id=WP_000492312.1;transl_table=11
NZ_JJLS01000202.1	RefSeq	gene	12276	13634	.	-	.	ID=gene-AC56_RS11335;Name=plaP;gbkey=Gene;gene=plaP;gene_biotype=protein_coding;locus_tag=AC56_RS11335;old_locus_tag=AC56_2394
NZ_JJLS01000202.1	Protein Homology	CDS	12276	13634	.	-	0	ID=cds-WP_000019197.1;Parent=gene-AC56_RS11335;Dbxref=GenBank:WP_000019197.1;Name=WP_000019197.1;gbkey=CDS;gene=plaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416518.2;locus_tag=AC56_RS11335;product=putrescine/proton symporter PlaP;protein_id=WP_000019197.1;transl_table=11
NZ_JJLS01000202.1	RefSeq	gene	13624	13686	.	-	.	ID=gene-AC56_RS32200;Name=yoeI;gbkey=Gene;gene=yoeI;gene_biotype=protein_coding;locus_tag=AC56_RS32200
NZ_JJLS01000202.1	Protein Homology	CDS	13624	13686	.	-	0	ID=cds-WP_010723108.1;Parent=gene-AC56_RS32200;Dbxref=GenBank:WP_010723108.1;Name=WP_010723108.1;gbkey=CDS;gene=yoeI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791246.1;locus_tag=AC56_RS32200;product=membrane protein YoeI;protein_id=WP_010723108.1;transl_table=11
NZ_JJLS01000202.1	RefSeq	gene	13901	14830	.	-	.	ID=gene-AC56_RS11330;Name=yeeY;gbkey=Gene;gene=yeeY;gene_biotype=protein_coding;locus_tag=AC56_RS11330;old_locus_tag=AC56_2396
NZ_JJLS01000202.1	Protein Homology	CDS	13901	14830	.	-	0	ID=cds-WP_000803351.1;Parent=gene-AC56_RS11330;Dbxref=GenBank:WP_000803351.1;Name=WP_000803351.1;gbkey=CDS;gene=yeeY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416519.4;locus_tag=AC56_RS11330;product=LysR substrate-binding domain-containing protein;protein_id=WP_000803351.1;transl_table=11
NZ_JJLS01000202.1	RefSeq	gene	14876	15700	.	-	.	ID=gene-AC56_RS11325;Name=yeeZ;gbkey=Gene;gene=yeeZ;gene_biotype=protein_coding;locus_tag=AC56_RS11325;old_locus_tag=AC56_2397
NZ_JJLS01000202.1	Protein Homology	CDS	14876	15700	.	-	0	ID=cds-WP_000754737.1;Parent=gene-AC56_RS11325;Dbxref=GenBank:WP_000754737.1;Name=WP_000754737.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;gene=yeeZ;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310845.1;locus_tag=AC56_RS11325;product=SDR family oxidoreductase;protein_id=WP_000754737.1;transl_table=11
NZ_JJLS01000202.1	RefSeq	gene	16125	16175	.	+	.	ID=gene-AC56_RS29750;Name=hisL;gbkey=Gene;gene=hisL;gene_biotype=protein_coding;locus_tag=AC56_RS29750
NZ_JJLS01000202.1	Protein Homology	CDS	16125	16175	.	+	0	ID=cds-WP_001364200.1;Parent=gene-AC56_RS29750;Dbxref=GenBank:WP_001364200.1;Name=WP_001364200.1;Ontology_term=GO:0000105;gbkey=CDS;gene=hisL;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416522.1;locus_tag=AC56_RS29750;product=his operon leader peptide;protein_id=WP_001364200.1;transl_table=11
NZ_JJLS01000202.1	cmsearch	sequence_feature	16151	16274	.	+	.	ID=id-NZ_JJLS01000202.1:16151..16274;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5
NZ_JJLS01000202.1	RefSeq	gene	16321	17220	.	+	.	ID=gene-AC56_RS11320;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=AC56_RS11320;old_locus_tag=AC56_2398
NZ_JJLS01000202.1	Protein Homology	CDS	16321	17220	.	+	0	ID=cds-WP_000131776.1;Parent=gene-AC56_RS11320;Dbxref=GenBank:WP_000131776.1;Name=WP_000131776.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=AC56_RS11320;product=ATP phosphoribosyltransferase;protein_id=WP_000131776.1;transl_table=11
NZ_JJLS01000202.1	RefSeq	gene	17226	18530	.	+	.	ID=gene-AC56_RS11315;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=AC56_RS11315;old_locus_tag=AC56_2399
NZ_JJLS01000202.1	Protein Homology	CDS	17226	18530	.	+	0	ID=cds-WP_001317939.1;Parent=gene-AC56_RS11315;Dbxref=GenBank:WP_001317939.1;Name=WP_001317939.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416524.1;locus_tag=AC56_RS11315;product=histidinol dehydrogenase;protein_id=WP_001317939.1;transl_table=11
NZ_JJLS01000202.1	RefSeq	gene	18527	19597	.	+	.	ID=gene-AC56_RS11310;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=AC56_RS11310;old_locus_tag=AC56_2400
NZ_JJLS01000202.1	Protein Homology	CDS	18527	19597	.	+	0	ID=cds-WP_000108940.1;Parent=gene-AC56_RS11310;Dbxref=GenBank:WP_000108940.1;Name=WP_000108940.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416525.1;locus_tag=AC56_RS11310;product=histidinol-phosphate transaminase;protein_id=WP_000108940.1;transl_table=11
NZ_JJLS01000202.1	RefSeq	gene	19597	20664	.	+	.	ID=gene-AC56_RS11305;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=AC56_RS11305;old_locus_tag=AC56_2401
NZ_JJLS01000202.1	Protein Homology	CDS	19597	20664	.	+	0	ID=cds-WP_000080093.1;Parent=gene-AC56_RS11305;Dbxref=GenBank:WP_000080093.1;Name=WP_000080093.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707917.2;locus_tag=AC56_RS11305;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_000080093.1;transl_table=11
NZ_JJLS01000202.1	RefSeq	gene	20664	21254	.	+	.	ID=gene-AC56_RS11300;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=AC56_RS11300;old_locus_tag=AC56_2402
NZ_JJLS01000202.1	Protein Homology	CDS	20664	21254	.	+	0	ID=cds-WP_001103560.1;Parent=gene-AC56_RS11300;Dbxref=GenBank:WP_001103560.1;Name=WP_001103560.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128083.1;locus_tag=AC56_RS11300;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_001103560.1;transl_table=11
NZ_JJLS01000202.1	RefSeq	gene	21254	21991	.	+	.	ID=gene-AC56_RS11295;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=AC56_RS11295;old_locus_tag=AC56_2403
NZ_JJLS01000202.1	Protein Homology	CDS	21254	21991	.	+	0	ID=cds-WP_032278513.1;Parent=gene-AC56_RS11295;Dbxref=GenBank:WP_032278513.1;Name=WP_032278513.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416528.2;locus_tag=AC56_RS11295;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_032278513.1;transl_table=11
NZ_JJLS01000202.1	RefSeq	gene	21973	22749	.	+	.	ID=gene-AC56_RS11290;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=AC56_RS11290;old_locus_tag=AC56_2404
NZ_JJLS01000202.1	Protein Homology	CDS	21973	22749	.	+	0	ID=cds-WP_032278514.1;Parent=gene-AC56_RS11290;Dbxref=GenBank:WP_032278514.1;Name=WP_032278514.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310853.1;locus_tag=AC56_RS11290;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_032278514.1;transl_table=11
NZ_JJLS01000202.1	RefSeq	gene	22743	23354	.	+	.	ID=gene-AC56_RS11285;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=AC56_RS11285;old_locus_tag=AC56_2405
NZ_JJLS01000202.1	Protein Homology	CDS	22743	23354	.	+	0	ID=cds-WP_000954883.1;Parent=gene-AC56_RS11285;Dbxref=GenBank:WP_000954883.1;Name=WP_000954883.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310854.1;locus_tag=AC56_RS11285;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_000954883.1;transl_table=11
NZ_JJLS01000202.1	RefSeq	gene	23451	24428	.	-	.	ID=gene-AC56_RS11280;Name=wzzB;gbkey=Gene;gene=wzzB;gene_biotype=protein_coding;locus_tag=AC56_RS11280;old_locus_tag=AC56_2406
NZ_JJLS01000202.1	Protein Homology	CDS	23451	24428	.	-	0	ID=cds-WP_032278515.1;Parent=gene-AC56_RS11280;Dbxref=GenBank:WP_032278515.1;Name=WP_032278515.1;Ontology_term=GO:0009103;gbkey=CDS;gene=wzzB;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310855.3;locus_tag=AC56_RS11280;product=LPS O-antigen chain length determinant protein WzzB;protein_id=WP_032278515.1;transl_table=11
NZ_JJLS01000202.1	RefSeq	gene	24574	25740	.	-	.	ID=gene-AC56_RS11275;Name=ugd;gbkey=Gene;gene=ugd;gene_biotype=protein_coding;locus_tag=AC56_RS11275;old_locus_tag=AC56_2407
NZ_JJLS01000202.1	Protein Homology	CDS	24574	25740	.	-	0	ID=cds-WP_001556092.1;Parent=gene-AC56_RS11275;Dbxref=GenBank:WP_001556092.1;Name=WP_001556092.1;Ontology_term=GO:0000271,GO:0003979;gbkey=CDS;gene=ugd;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310856.1;locus_tag=AC56_RS11275;product=UDP-glucose 6-dehydrogenase;protein_id=WP_001556092.1;transl_table=11
NZ_JJLS01000202.1	RefSeq	gene	25989	27395	.	-	.	ID=gene-AC56_RS11270;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=AC56_RS11270;old_locus_tag=AC56_2408
NZ_JJLS01000202.1	Protein Homology	CDS	25989	27395	.	-	0	ID=cds-WP_001556093.1;Parent=gene-AC56_RS11270;Dbxref=GenBank:WP_001556093.1;Name=WP_001556093.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310857.1;locus_tag=AC56_RS11270;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_001556093.1;transl_table=11
NZ_JJLS01000202.1	RefSeq	pseudogene	27537	27848	.	+	.	ID=gene-AC56_RS0126455;Name=AC56_RS0126455;end_range=27848,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0126455;partial=true;pseudo=true
NZ_JJLS01000202.1	Protein Homology	CDS	27537	27848	.	+	0	ID=cds-AC56_RS0126455;Parent=gene-AC56_RS0126455;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=27848,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS0126455;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000203.1 1 2242
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000203.1	RefSeq	region	1	2242	.	+	.	ID=NZ_JJLS01000203.1:1..2242;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000203.1	RefSeq	pseudogene	1	150	.	-	.	ID=gene-AC56_RS11265;Name=AC56_RS11265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS11265;old_locus_tag=AC56_2410;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000203.1	Protein Homology	CDS	1	150	.	-	0	ID=cds-AC56_RS11265;Parent=gene-AC56_RS11265;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309780.1;locus_tag=AC56_RS11265;partial=true;product=acyl-CoA thioester hydrolase YciA;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000203.1	RefSeq	gene	255	794	.	-	.	ID=gene-AC56_RS11260;Name=AC56_RS11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11260;old_locus_tag=AC56_2411
NZ_JJLS01000203.1	Protein Homology	CDS	255	794	.	-	0	ID=cds-WP_000808667.1-2;Parent=gene-AC56_RS11260;Dbxref=GenBank:WP_000808667.1;Name=WP_000808667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309781.1;locus_tag=AC56_RS11260;product=septation protein A;protein_id=WP_000808667.1;transl_table=11
NZ_JJLS01000203.1	RefSeq	gene	824	1567	.	-	.	ID=gene-AC56_RS11255;Name=AC56_RS11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11255;old_locus_tag=AC56_2412
NZ_JJLS01000203.1	Protein Homology	CDS	824	1567	.	-	0	ID=cds-WP_000028540.1-2;Parent=gene-AC56_RS11255;Dbxref=GenBank:WP_000028540.1;Name=WP_000028540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415771.1;locus_tag=AC56_RS11255;product=YciC family protein;protein_id=WP_000028540.1;transl_table=11
NZ_JJLS01000203.1	RefSeq	pseudogene	1595	1684	.	-	.	ID=gene-AC56_RS32205;Name=AC56_RS32205;end_range=1684,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS32205;partial=true;pseudo=true
NZ_JJLS01000203.1	Protein Homology	CDS	1595	1684	.	-	0	ID=cds-AC56_RS32205;Parent=gene-AC56_RS32205;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1684,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460692.1;locus_tag=AC56_RS32205;partial=true;product=YkgJ family cysteine cluster protein;pseudo=true;transl_table=11
NZ_JJLS01000203.1	RefSeq	pseudogene	1893	2242	.	+	.	ID=gene-AC56_RS0126460;Name=AC56_RS0126460;end_range=2242,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0126460;partial=true;pseudo=true
NZ_JJLS01000203.1	Protein Homology	CDS	1893	2242	.	+	0	ID=cds-AC56_RS0126460;Parent=gene-AC56_RS0126460;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=2242,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS0126460;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000204.1 1 10553
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000204.1	RefSeq	region	1	10553	.	+	.	ID=NZ_JJLS01000204.1:1..10553;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000204.1	RefSeq	gene	1	366	.	-	.	ID=gene-AC56_RS11250;Name=AC56_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11250;old_locus_tag=AC56_2414;partial=true;start_range=.,1
NZ_JJLS01000204.1	Protein Homology	CDS	1	366	.	-	0	ID=cds-WP_032451470.1;Parent=gene-AC56_RS11250;Dbxref=GenBank:WP_032451470.1;Name=WP_032451470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS11250;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032451470.1;start_range=.,1;transl_table=11
NZ_JJLS01000204.1	RefSeq	pseudogene	399	2486	.	-	.	ID=gene-AC56_RS11245;Name=wzc;gbkey=Gene;gene=wzc;gene_biotype=pseudogene;locus_tag=AC56_RS11245;old_locus_tag=AC56_2415;partial=true;pseudo=true;start_range=.,399
NZ_JJLS01000204.1	Protein Homology	CDS	399	2486	.	-	0	ID=cds-AC56_RS11245;Parent=gene-AC56_RS11245;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzc;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416564.4;locus_tag=AC56_RS11245;partial=true;product=tyrosine-protein kinase Wzc;pseudo=true;start_range=.,399;transl_table=11
NZ_JJLS01000204.1	RefSeq	gene	2489	2932	.	-	.	ID=gene-AC56_RS11240;Name=wzb;gbkey=Gene;gene=wzb;gene_biotype=protein_coding;locus_tag=AC56_RS11240;old_locus_tag=AC56_2416
NZ_JJLS01000204.1	Protein Homology	CDS	2489	2932	.	-	0	ID=cds-WP_032278522.1;Parent=gene-AC56_RS11240;Dbxref=GenBank:WP_032278522.1;Name=WP_032278522.1;gbkey=CDS;gene=wzb;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310893.1;locus_tag=AC56_RS11240;product=low molecular weight protein-tyrosine-phosphatase Wzb;protein_id=WP_032278522.1;transl_table=11
NZ_JJLS01000204.1	RefSeq	gene	2938	4077	.	-	.	ID=gene-AC56_RS11235;Name=wza;gbkey=Gene;gene=wza;gene_biotype=protein_coding;locus_tag=AC56_RS11235;old_locus_tag=AC56_2417
NZ_JJLS01000204.1	Protein Homology	CDS	2938	4077	.	-	0	ID=cds-WP_000978094.1;Parent=gene-AC56_RS11235;Dbxref=GenBank:WP_000978094.1;Name=WP_000978094.1;gbkey=CDS;gene=wza;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310894.1;locus_tag=AC56_RS11235;product=polysaccharide export protein Wza;protein_id=WP_000978094.1;transl_table=11
NZ_JJLS01000204.1	RefSeq	gene	4386	4535	.	+	.	ID=gene-AC56_RS32980;Name=AC56_RS32980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS32980
NZ_JJLS01000204.1	GeneMarkS-2+	CDS	4386	4535	.	+	0	ID=cds-WP_162829205.1;Parent=gene-AC56_RS32980;Dbxref=GenBank:WP_162829205.1;Name=WP_162829205.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS32980;product=hypothetical protein;protein_id=WP_162829205.1;transl_table=11
NZ_JJLS01000204.1	RefSeq	gene	4736	6319	.	+	.	ID=gene-AC56_RS11230;Name=yegH;gbkey=Gene;gene=yegH;gene_biotype=protein_coding;locus_tag=AC56_RS11230;old_locus_tag=AC56_2418
NZ_JJLS01000204.1	Protein Homology	CDS	4736	6319	.	+	0	ID=cds-WP_032278524.1;Parent=gene-AC56_RS11230;Dbxref=GenBank:WP_032278524.1;Name=WP_032278524.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yegH;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416567.4;locus_tag=AC56_RS11230;product=TerC family protein;protein_id=WP_032278524.1;transl_table=11
NZ_JJLS01000204.1	RefSeq	gene	6593	8446	.	-	.	ID=gene-AC56_RS11225;Name=asmA;gbkey=Gene;gene=asmA;gene_biotype=protein_coding;locus_tag=AC56_RS11225;old_locus_tag=AC56_2419
NZ_JJLS01000204.1	Protein Homology	CDS	6593	8446	.	-	0	ID=cds-WP_001252371.1;Parent=gene-AC56_RS11225;Dbxref=GenBank:WP_001252371.1;Name=WP_001252371.1;gbkey=CDS;gene=asmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416568.1;locus_tag=AC56_RS11225;product=outer membrane assembly protein AsmA;protein_id=WP_001252371.1;transl_table=11
NZ_JJLS01000204.1	RefSeq	gene	8468	9049	.	-	.	ID=gene-AC56_RS11220;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=AC56_RS11220;old_locus_tag=AC56_2420
NZ_JJLS01000204.1	Protein Homology	CDS	8468	9049	.	-	0	ID=cds-WP_001234767.1;Parent=gene-AC56_RS11220;Dbxref=GenBank:WP_001234767.1;Name=WP_001234767.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942378.1;locus_tag=AC56_RS11220;product=dCTP deaminase;protein_id=WP_001234767.1;transl_table=11
NZ_JJLS01000204.1	RefSeq	gene	9141	9782	.	-	.	ID=gene-AC56_RS11215;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=AC56_RS11215;old_locus_tag=AC56_2421
NZ_JJLS01000204.1	Protein Homology	CDS	9141	9782	.	-	0	ID=cds-WP_001295424.1;Parent=gene-AC56_RS11215;Dbxref=GenBank:WP_001295424.1;Name=WP_001295424.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707960.1;locus_tag=AC56_RS11215;product=uridine kinase;protein_id=WP_001295424.1;transl_table=11
NZ_JJLS01000204.1	RefSeq	pseudogene	10117	10553	.	+	.	ID=gene-AC56_RS11210;Name=AC56_RS11210;end_range=10553,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS11210;old_locus_tag=AC56_2422;partial=true;pseudo=true
NZ_JJLS01000204.1	Protein Homology	CDS	10117	10553	.	+	0	ID=cds-AC56_RS11210;Parent=gene-AC56_RS11210;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=10553,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS11210;partial=true;product=IS5-like element ISKpn26 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000205.1 1 10723
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000205.1	RefSeq	region	1	10723	.	+	.	ID=NZ_JJLS01000205.1:1..10723;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000205.1	RefSeq	gene	1	378	.	+	.	ID=gene-AC56_RS0126465;Name=AC56_RS0126465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0126465;old_locus_tag=AC56_2423;partial=true;start_range=.,1
NZ_JJLS01000205.1	Protein Homology	CDS	1	378	.	+	0	ID=cds-WP_032278348.1-2;Parent=gene-AC56_RS0126465;Dbxref=GenBank:WP_032278348.1;Name=WP_032278348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS0126465;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032278348.1;start_range=.,1;transl_table=11
NZ_JJLS01000205.1	RefSeq	gene	360	581	.	+	.	ID=gene-AC56_RS33780;Name=AC56_RS33780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33780
NZ_JJLS01000205.1	Protein Homology	CDS	360	581	.	+	0	ID=cds-WP_315747911.1;Parent=gene-AC56_RS33780;Dbxref=GenBank:WP_315747911.1;Name=WP_315747911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001340235.1;locus_tag=AC56_RS33780;product=hypothetical protein;protein_id=WP_315747911.1;transl_table=11
NZ_JJLS01000205.1	RefSeq	gene	581	3898	.	+	.	ID=gene-AC56_RS11205;Name=dgcE;gbkey=Gene;gene=dgcE;gene_biotype=protein_coding;locus_tag=AC56_RS11205;old_locus_tag=AC56_2425
NZ_JJLS01000205.1	Protein Homology	CDS	581	3898	.	+	0	ID=cds-WP_032278527.1;Parent=gene-AC56_RS11205;Dbxref=GenBank:WP_032278527.1;Name=WP_032278527.1;Ontology_term=GO:0005515;gbkey=CDS;gene=dgcE;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416571.1;locus_tag=AC56_RS11205;product=diguanylate cyclase;protein_id=WP_032278527.1;transl_table=11
NZ_JJLS01000205.1	RefSeq	gene	4008	4856	.	-	.	ID=gene-AC56_RS11200;Name=alkA;gbkey=Gene;gene=alkA;gene_biotype=protein_coding;locus_tag=AC56_RS11200;old_locus_tag=AC56_2426
NZ_JJLS01000205.1	Protein Homology	CDS	4008	4856	.	-	0	ID=cds-WP_032278528.1;Parent=gene-AC56_RS11200;Dbxref=GenBank:WP_032278528.1;Name=WP_032278528.1;Ontology_term=GO:0006281,GO:0003824;gbkey=CDS;gene=alkA;go_function=catalytic activity|0003824||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310904.1;locus_tag=AC56_RS11200;product=DNA-3-methyladenine glycosylase 2;protein_id=WP_032278528.1;transl_table=11
NZ_JJLS01000205.1	RefSeq	gene	4990	6342	.	+	.	ID=gene-AC56_RS11195;Name=yegD;gbkey=Gene;gene=yegD;gene_biotype=protein_coding;locus_tag=AC56_RS11195;old_locus_tag=AC56_2427
NZ_JJLS01000205.1	Protein Homology	CDS	4990	6342	.	+	0	ID=cds-WP_032278529.1;Parent=gene-AC56_RS11195;Dbxref=GenBank:WP_032278529.1;Name=WP_032278529.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yegD;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416573.4;locus_tag=AC56_RS11195;product=molecular chaperone;protein_id=WP_032278529.1;transl_table=11
NZ_JJLS01000205.1	RefSeq	gene	6354	8294	.	-	.	ID=gene-AC56_RS11190;Name=yegI;gbkey=Gene;gene=yegI;gene_biotype=protein_coding;locus_tag=AC56_RS11190;old_locus_tag=AC56_2428
NZ_JJLS01000205.1	Protein Homology	CDS	6354	8294	.	-	0	ID=cds-WP_032278530.1;Parent=gene-AC56_RS11190;Dbxref=GenBank:WP_032278530.1;Name=WP_032278530.1;gbkey=CDS;gene=yegI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310906.2;locus_tag=AC56_RS11190;product=protein kinase YegI;protein_id=WP_032278530.1;transl_table=11
NZ_JJLS01000205.1	RefSeq	gene	8291	9052	.	-	.	ID=gene-AC56_RS11185;Name=pphC;gbkey=Gene;gene=pphC;gene_biotype=protein_coding;locus_tag=AC56_RS11185;old_locus_tag=AC56_2429
NZ_JJLS01000205.1	Protein Homology	CDS	8291	9052	.	-	0	ID=cds-WP_032278532.1;Parent=gene-AC56_RS11185;Dbxref=GenBank:WP_032278532.1;Name=WP_032278532.1;Ontology_term=GO:0004722;gbkey=CDS;gene=pphC;go_function=protein serine/threonine phosphatase activity|0004722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707964.1;locus_tag=AC56_RS11185;product=PP2C family serine/threonine-protein phosphatase;protein_id=WP_032278532.1;transl_table=11
NZ_JJLS01000205.1	RefSeq	gene	9049	9708	.	-	.	ID=gene-AC56_RS11180;Name=yegL;gbkey=Gene;gene=yegL;gene_biotype=protein_coding;locus_tag=AC56_RS11180;old_locus_tag=AC56_2430
NZ_JJLS01000205.1	Protein Homology	CDS	9049	9708	.	-	0	ID=cds-WP_000003178.1;Parent=gene-AC56_RS11180;Dbxref=GenBank:WP_000003178.1;Name=WP_000003178.1;gbkey=CDS;gene=yegL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416577.1;locus_tag=AC56_RS11180;product=vWA domain-containing protein;protein_id=WP_000003178.1;transl_table=11
NZ_JJLS01000205.1	RefSeq	gene	9929	9988	.	-	.	ID=gene-AC56_RS31395;Name=ibsA;gbkey=Gene;gene=ibsA;gene_biotype=protein_coding;locus_tag=AC56_RS31395
NZ_JJLS01000205.1	Protein Homology	CDS	9929	9988	.	-	0	ID=cds-WP_010723109.1;Parent=gene-AC56_RS31395;Dbxref=GenBank:WP_010723109.1;Name=WP_010723109.1;gbkey=CDS;gene=ibsA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791247.1;locus_tag=AC56_RS31395;product=type I toxin-antitoxin system toxin IbsA;protein_id=WP_010723109.1;transl_table=11
NZ_JJLS01000205.1	RefSeq	pseudogene	10302	10723	.	+	.	ID=gene-AC56_RS29785;Name=AC56_RS29785;end_range=10723,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS29785;old_locus_tag=AC56_2431;partial=true;pseudo=true
NZ_JJLS01000205.1	Protein Homology	CDS	10302	10723	.	+	0	ID=cds-AC56_RS29785;Parent=gene-AC56_RS29785;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=10723,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS29785;partial=true;product=IS4 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000206.1 1 18420
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000206.1	RefSeq	region	1	18420	.	+	.	ID=NZ_JJLS01000206.1:1..18420;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000206.1	RefSeq	gene	1	961	.	+	.	ID=gene-AC56_RS11175;Name=AC56_RS11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11175;old_locus_tag=AC56_2432;partial=true;start_range=.,1
NZ_JJLS01000206.1	Protein Homology	CDS	1	961	.	+	1	ID=cds-WP_032282478.1-10;Parent=gene-AC56_RS11175;Dbxref=GenBank:WP_032282478.1;Name=WP_032282478.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS11175;partial=true;product=IS4-like element IS421 family transposase;protein_id=WP_032282478.1;start_range=.,1;transl_table=11
NZ_JJLS01000206.1	RefSeq	gene	1157	1213	.	-	.	ID=gene-AC56_RS32215;Name=AC56_RS32215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS32215
NZ_JJLS01000206.1	Protein Homology	CDS	1157	1213	.	-	0	ID=cds-WP_001386899.1;Parent=gene-AC56_RS32215;Dbxref=GenBank:WP_001386899.1;Name=WP_001386899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791248.1;locus_tag=AC56_RS32215;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_001386899.1;transl_table=11
NZ_JJLS01000206.1	RefSeq	gene	1492	2739	.	+	.	ID=gene-AC56_RS11170;Name=mdtA;gbkey=Gene;gene=mdtA;gene_biotype=protein_coding;locus_tag=AC56_RS11170;old_locus_tag=AC56_2433
NZ_JJLS01000206.1	Protein Homology	CDS	1492	2739	.	+	0	ID=cds-WP_032282755.1;Parent=gene-AC56_RS11170;Dbxref=GenBank:WP_032282755.1;Name=WP_032282755.1;gbkey=CDS;gene=mdtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416578.2;locus_tag=AC56_RS11170;product=multidrug efflux RND transporter subunit MdtA;protein_id=WP_032282755.1;transl_table=11
NZ_JJLS01000206.1	RefSeq	gene	2739	5861	.	+	.	ID=gene-AC56_RS11165;Name=mdtB;gbkey=Gene;gene=mdtB;gene_biotype=protein_coding;locus_tag=AC56_RS11165;old_locus_tag=AC56_2434
NZ_JJLS01000206.1	Protein Homology	CDS	2739	5861	.	+	0	ID=cds-WP_032278538.1;Parent=gene-AC56_RS11165;Dbxref=GenBank:WP_032278538.1;Name=WP_032278538.1;gbkey=CDS;gene=mdtB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001197920.1;locus_tag=AC56_RS11165;product=multidrug efflux RND transporter permease subunit MdtB;protein_id=WP_032278538.1;transl_table=11
NZ_JJLS01000206.1	RefSeq	gene	5862	8939	.	+	.	ID=gene-AC56_RS11160;Name=mdtC;gbkey=Gene;gene=mdtC;gene_biotype=protein_coding;locus_tag=AC56_RS11160;old_locus_tag=AC56_2435
NZ_JJLS01000206.1	Protein Homology	CDS	5862	8939	.	+	0	ID=cds-WP_032278539.1;Parent=gene-AC56_RS11160;Dbxref=GenBank:WP_032278539.1;Name=WP_032278539.1;gbkey=CDS;gene=mdtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416580.1;locus_tag=AC56_RS11160;product=multidrug efflux RND transporter permease subunit MdtC;protein_id=WP_032278539.1;transl_table=11
NZ_JJLS01000206.1	RefSeq	gene	8940	10355	.	+	.	ID=gene-AC56_RS11155;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=AC56_RS11155;old_locus_tag=AC56_2436
NZ_JJLS01000206.1	Protein Homology	CDS	8940	10355	.	+	0	ID=cds-WP_000130887.1;Parent=gene-AC56_RS11155;Dbxref=GenBank:WP_000130887.1;Name=WP_000130887.1;gbkey=CDS;gene=mdtD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310912.1;locus_tag=AC56_RS11155;product=MFS transporter;protein_id=WP_000130887.1;transl_table=11
NZ_JJLS01000206.1	RefSeq	gene	10352	11755	.	+	.	ID=gene-AC56_RS11150;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;locus_tag=AC56_RS11150;old_locus_tag=AC56_2437
NZ_JJLS01000206.1	Protein Homology	CDS	10352	11755	.	+	0	ID=cds-WP_032282756.1;Parent=gene-AC56_RS11150;Dbxref=GenBank:WP_032282756.1;Name=WP_032282756.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=baeS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416582.1;locus_tag=AC56_RS11150;product=two-component system sensor histidine kinase BaeS;protein_id=WP_032282756.1;transl_table=11
NZ_JJLS01000206.1	RefSeq	gene	11752	12474	.	+	.	ID=gene-AC56_RS11145;Name=baeR;gbkey=Gene;gene=baeR;gene_biotype=protein_coding;locus_tag=AC56_RS11145;old_locus_tag=AC56_2438
NZ_JJLS01000206.1	Protein Homology	CDS	11752	12474	.	+	0	ID=cds-WP_000137861.1;Parent=gene-AC56_RS11145;Dbxref=GenBank:WP_000137861.1;Name=WP_000137861.1;Ontology_term=GO:0000160,GO:0003677;gbkey=CDS;gene=baeR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310914.1;locus_tag=AC56_RS11145;product=two-component system response regulator BaeR;protein_id=WP_000137861.1;transl_table=11
NZ_JJLS01000206.1	RefSeq	gene	12620	12952	.	+	.	ID=gene-AC56_RS11140;Name=yegP;gbkey=Gene;gene=yegP;gene_biotype=protein_coding;locus_tag=AC56_RS11140;old_locus_tag=AC56_2439
NZ_JJLS01000206.1	Protein Homology	CDS	12620	12952	.	+	0	ID=cds-WP_000929408.1;Parent=gene-AC56_RS11140;Dbxref=GenBank:WP_000929408.1;Name=WP_000929408.1;gbkey=CDS;gene=yegP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310915.2;locus_tag=AC56_RS11140;product=YegP family protein;protein_id=WP_000929408.1;transl_table=11
NZ_JJLS01000206.1	RefSeq	gene	13099	14460	.	+	.	ID=gene-AC56_RS11135;Name=yegQ;gbkey=Gene;gene=yegQ;gene_biotype=protein_coding;locus_tag=AC56_RS11135;old_locus_tag=AC56_2440
NZ_JJLS01000206.1	Protein Homology	CDS	13099	14460	.	+	0	ID=cds-WP_000476014.1;Parent=gene-AC56_RS11135;Dbxref=GenBank:WP_000476014.1;Name=WP_000476014.1;gbkey=CDS;gene=yegQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310916.1;locus_tag=AC56_RS11135;product=tRNA 5-hydroxyuridine modification protein YegQ;protein_id=WP_000476014.1;transl_table=11
NZ_JJLS01000206.1	RefSeq	gene	14791	15108	.	-	.	ID=gene-AC56_RS11130;Name=yegR;gbkey=Gene;gene=yegR;gene_biotype=protein_coding;locus_tag=AC56_RS11130;old_locus_tag=AC56_2441
NZ_JJLS01000206.1	Protein Homology	CDS	14791	15108	.	-	0	ID=cds-WP_001318299.1;Parent=gene-AC56_RS11130;Dbxref=GenBank:WP_001318299.1;Name=WP_001318299.1;gbkey=CDS;gene=yegR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416589.2;locus_tag=AC56_RS11130;product=protein YegR;protein_id=WP_001318299.1;transl_table=11
NZ_JJLS01000206.1	RefSeq	gene	15514	16413	.	+	.	ID=gene-AC56_RS11125;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=AC56_RS11125;old_locus_tag=AC56_2442
NZ_JJLS01000206.1	Protein Homology	CDS	15514	16413	.	+	0	ID=cds-WP_000807356.1;Parent=gene-AC56_RS11125;Dbxref=GenBank:WP_000807356.1;Name=WP_000807356.1;Ontology_term=GO:0001727,GO:0046872;gbkey=CDS;gene=yegS;go_function=lipid kinase activity|0001727||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416590.1;locus_tag=AC56_RS11125;product=lipid kinase YegS;protein_id=WP_000807356.1;transl_table=11
NZ_JJLS01000206.1	RefSeq	gene	16495	17268	.	-	.	ID=gene-AC56_RS11120;Name=AC56_RS11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11120;old_locus_tag=AC56_2443
NZ_JJLS01000206.1	Protein Homology	CDS	16495	17268	.	-	0	ID=cds-WP_001295426.1;Parent=gene-AC56_RS11120;Dbxref=GenBank:WP_001295426.1;Name=WP_001295426.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001083894.1;locus_tag=AC56_RS11120;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001295426.1;transl_table=11
NZ_JJLS01000206.1	RefSeq	pseudogene	17374	18003	.	-	.	ID=gene-AC56_RS0126480;Name=AC56_RS0126480;end_range=18003,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0126480;old_locus_tag=AC56_2444;partial=true;pseudo=true
NZ_JJLS01000206.1	Protein Homology	CDS	17374	18003	.	-	0	ID=cds-AC56_RS0126480;Parent=gene-AC56_RS0126480;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=18003,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310921.1;locus_tag=AC56_RS0126480;partial=true;product=zinc-binding dehydrogenase;pseudo=true;transl_table=11
NZ_JJLS01000206.1	RefSeq	pseudogene	18059	18420	.	+	.	ID=gene-AC56_RS0126485;Name=AC56_RS0126485;end_range=18420,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0126485;partial=true;pseudo=true
NZ_JJLS01000206.1	Protein Homology	CDS	18059	18420	.	+	0	ID=cds-AC56_RS0126485;Parent=gene-AC56_RS0126485;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=18420,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS0126485;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000207.1 1 9270
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000207.1	RefSeq	region	1	9270	.	+	.	ID=NZ_JJLS01000207.1:1..9270;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000207.1	RefSeq	gene	1	446	.	+	.	ID=gene-AC56_RS11115;Name=AC56_RS11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11115;old_locus_tag=AC56_2446;partial=true;start_range=.,1
NZ_JJLS01000207.1	Protein Homology	CDS	1	446	.	+	2	ID=cds-WP_032278416.1;Parent=gene-AC56_RS11115;Dbxref=GenBank:WP_032278416.1;Name=WP_032278416.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS11115;partial=true;product=IS1 family transposase;protein_id=WP_032278416.1;start_range=.,1;transl_table=11
NZ_JJLS01000207.1	RefSeq	gene	381	1673	.	-	.	ID=gene-AC56_RS0126495;Name=gatZ;gbkey=Gene;gene=gatZ;gene_biotype=protein_coding;locus_tag=AC56_RS0126495
NZ_JJLS01000207.1	Protein Homology	CDS	381	1673	.	-	0	ID=cds-WP_050439693.1;Parent=gene-AC56_RS0126495;Dbxref=GenBank:WP_050439693.1;Name=WP_050439693.1;gbkey=CDS;gene=gatZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015698415.1;locus_tag=AC56_RS0126495;product=tagatose-bisphosphate aldolase subunit GatZ;protein_id=WP_050439693.1;transl_table=11
NZ_JJLS01000207.1	RefSeq	gene	1702	2556	.	-	.	ID=gene-AC56_RS11110;Name=gatY;gbkey=Gene;gene=gatY;gene_biotype=protein_coding;locus_tag=AC56_RS11110;old_locus_tag=AC56_2447
NZ_JJLS01000207.1	Protein Homology	CDS	1702	2556	.	-	0	ID=cds-WP_032278542.1;Parent=gene-AC56_RS11110;Dbxref=GenBank:WP_032278542.1;Name=WP_032278542.1;gbkey=CDS;gene=gatY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416599.2;locus_tag=AC56_RS11110;product=tagatose-bisphosphate aldolase subunit GatY;protein_id=WP_032278542.1;transl_table=11
NZ_JJLS01000207.1	RefSeq	gene	2864	3916	.	-	.	ID=gene-AC56_RS11105;Name=fbaB;gbkey=Gene;gene=fbaB;gene_biotype=protein_coding;locus_tag=AC56_RS11105;old_locus_tag=AC56_2448
NZ_JJLS01000207.1	Protein Homology	CDS	2864	3916	.	-	0	ID=cds-WP_000129551.1;Parent=gene-AC56_RS11105;Dbxref=GenBank:WP_000129551.1;Name=WP_000129551.1;Ontology_term=GO:0004332;gbkey=CDS;gene=fbaB;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820796.1;locus_tag=AC56_RS11105;product=class I fructose-bisphosphate aldolase;protein_id=WP_000129551.1;transl_table=11
NZ_JJLS01000207.1	RefSeq	gene	4173	5450	.	+	.	ID=gene-AC56_RS11100;Name=yegT;gbkey=Gene;gene=yegT;gene_biotype=protein_coding;locus_tag=AC56_RS11100;old_locus_tag=AC56_2449
NZ_JJLS01000207.1	Protein Homology	CDS	4173	5450	.	+	0	ID=cds-WP_000858484.1;Parent=gene-AC56_RS11100;Dbxref=GenBank:WP_000858484.1;Name=WP_000858484.1;Ontology_term=GO:0015858,GO:0055085,GO:0015506,GO:0022857;gbkey=CDS;gene=yegT;go_function=nucleoside:proton symporter activity|0015506||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleoside transport|0015858||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416601.1;locus_tag=AC56_RS11100;product=nucleoside permease;protein_id=WP_000858484.1;transl_table=11
NZ_JJLS01000207.1	RefSeq	gene	5447	6451	.	+	.	ID=gene-AC56_RS11095;Name=yegU;gbkey=Gene;gene=yegU;gene_biotype=protein_coding;locus_tag=AC56_RS11095;old_locus_tag=AC56_2450
NZ_JJLS01000207.1	Protein Homology	CDS	5447	6451	.	+	0	ID=cds-WP_000846222.1;Parent=gene-AC56_RS11095;Dbxref=GenBank:WP_000846222.1;Name=WP_000846222.1;gbkey=CDS;gene=yegU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416602.1;locus_tag=AC56_RS11095;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_000846222.1;transl_table=11
NZ_JJLS01000207.1	RefSeq	gene	6448	7413	.	+	.	ID=gene-AC56_RS11090;Name=yegV;gbkey=Gene;gene=yegV;gene_biotype=protein_coding;locus_tag=AC56_RS11090;old_locus_tag=AC56_2451
NZ_JJLS01000207.1	Protein Homology	CDS	6448	7413	.	+	0	ID=cds-WP_032278543.1;Parent=gene-AC56_RS11090;Dbxref=GenBank:WP_032278543.1;Name=WP_032278543.1;Ontology_term=GO:0005975,GO:0016301;gbkey=CDS;gene=yegV;go_function=kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416603.1;locus_tag=AC56_RS11090;product=carbohydrate kinase family protein;protein_id=WP_032278543.1;transl_table=11
NZ_JJLS01000207.1	RefSeq	gene	7387	8133	.	-	.	ID=gene-AC56_RS11085;Name=yegW;gbkey=Gene;gene=yegW;gene_biotype=protein_coding;locus_tag=AC56_RS11085;old_locus_tag=AC56_2452
NZ_JJLS01000207.1	Protein Homology	CDS	7387	8133	.	-	0	ID=cds-WP_000434038.1;Parent=gene-AC56_RS11085;Dbxref=GenBank:WP_000434038.1;Name=WP_000434038.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=yegW;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310931.1;locus_tag=AC56_RS11085;product=GntR family transcriptional regulator;protein_id=WP_000434038.1;transl_table=11
NZ_JJLS01000207.1	RefSeq	pseudogene	8185	8862	.	-	.	ID=gene-AC56_RS29795;Name=AC56_RS29795;end_range=8862,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS29795;old_locus_tag=AC56_2453;partial=true;pseudo=true
NZ_JJLS01000207.1	Protein Homology	CDS	8185	8862	.	-	0	ID=cds-AC56_RS29795;Parent=gene-AC56_RS29795;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=8862,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416605.2;locus_tag=AC56_RS29795;partial=true;product=glycoside hydrolase family 25 protein;pseudo=true;transl_table=11
NZ_JJLS01000207.1	RefSeq	gene	8896	9270	.	+	.	ID=gene-AC56_RS11080;Name=AC56_RS11080;end_range=9270,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11080;old_locus_tag=AC56_2454;partial=true
NZ_JJLS01000207.1	Protein Homology	CDS	8896	9270	.	+	0	ID=cds-WP_141012165.1;Parent=gene-AC56_RS11080;Dbxref=GenBank:WP_141012165.1;Name=WP_141012165.1;end_range=9270,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224844.1;locus_tag=AC56_RS11080;partial=true;product=transposase;protein_id=WP_141012165.1;transl_table=11
##sequence-region NZ_JJLS01000208.1 1 5737
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000208.1	RefSeq	region	1	5737	.	+	.	ID=NZ_JJLS01000208.1:1..5737;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000208.1	RefSeq	pseudogene	1	424	.	+	.	ID=gene-AC56_RS11075;Name=AC56_RS11075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS11075;old_locus_tag=AC56_2455;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000208.1	Protein Homology	CDS	1	424	.	+	1	ID=cds-AC56_RS11075;Parent=gene-AC56_RS11075;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS11075;partial=true;product=IS5-like element IS903B family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000208.1	RefSeq	pseudogene	480	629	.	-	.	ID=gene-AC56_RS32985;Name=AC56_RS32985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS32985;partial=true;pseudo=true;start_range=.,480
NZ_JJLS01000208.1	Protein Homology	CDS	480	629	.	-	0	ID=cds-AC56_RS32985;Parent=gene-AC56_RS32985;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416605.2;locus_tag=AC56_RS32985;partial=true;product=glycoside hydrolase family 25 protein;pseudo=true;start_range=.,480;transl_table=11
NZ_JJLS01000208.1	RefSeq	gene	694	1494	.	-	.	ID=gene-AC56_RS11070;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=AC56_RS11070;old_locus_tag=AC56_2456
NZ_JJLS01000208.1	Protein Homology	CDS	694	1494	.	-	0	ID=cds-WP_032278549.1;Parent=gene-AC56_RS11070;Dbxref=GenBank:WP_032278549.1;Name=WP_032278549.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416606.1;locus_tag=AC56_RS11070;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_032278549.1;transl_table=11
NZ_JJLS01000208.1	RefSeq	gene	1491	2279	.	-	.	ID=gene-AC56_RS11065;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=AC56_RS11065;old_locus_tag=AC56_2457
NZ_JJLS01000208.1	Protein Homology	CDS	1491	2279	.	-	0	ID=cds-WP_001195564.1;Parent=gene-AC56_RS11065;Dbxref=GenBank:WP_001195564.1;Name=WP_001195564.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416607.1;locus_tag=AC56_RS11065;product=hydroxyethylthiazole kinase;protein_id=WP_001195564.1;transl_table=11
NZ_JJLS01000208.1	cmsearch	riboswitch	2314	2410	.	-	.	ID=id-NZ_JJLS01000208.1:2314..2410;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_JJLS01000208.1	RefSeq	gene	2502	2774	.	-	.	ID=gene-AC56_RS11060;Name=rcnR;gbkey=Gene;gene=rcnR;gene_biotype=protein_coding;locus_tag=AC56_RS11060;old_locus_tag=AC56_2458
NZ_JJLS01000208.1	Protein Homology	CDS	2502	2774	.	-	0	ID=cds-WP_000019944.1;Parent=gene-AC56_RS11060;Dbxref=GenBank:WP_000019944.1;Name=WP_000019944.1;gbkey=CDS;gene=rcnR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310938.1;locus_tag=AC56_RS11060;product=Ni(II)/Co(II)-binding transcriptional repressor RcnR;protein_id=WP_000019944.1;transl_table=11
NZ_JJLS01000208.1	RefSeq	gene	2895	3719	.	+	.	ID=gene-AC56_RS11055;Name=rcnA;gbkey=Gene;gene=rcnA;gene_biotype=protein_coding;locus_tag=AC56_RS11055;old_locus_tag=AC56_2459
NZ_JJLS01000208.1	Protein Homology	CDS	2895	3719	.	+	0	ID=cds-WP_000134636.1;Parent=gene-AC56_RS11055;Dbxref=GenBank:WP_000134636.1;Name=WP_000134636.1;gbkey=CDS;gene=rcnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416609.1;locus_tag=AC56_RS11055;product=nickel/cobalt efflux protein RcnA;protein_id=WP_000134636.1;transl_table=11
NZ_JJLS01000208.1	RefSeq	gene	3938	4276	.	+	.	ID=gene-AC56_RS11050;Name=rcnB;gbkey=Gene;gene=rcnB;gene_biotype=protein_coding;locus_tag=AC56_RS11050;old_locus_tag=AC56_2460
NZ_JJLS01000208.1	Protein Homology	CDS	3938	4276	.	+	0	ID=cds-WP_000153067.1;Parent=gene-AC56_RS11050;Dbxref=GenBank:WP_000153067.1;Name=WP_000153067.1;gbkey=CDS;gene=rcnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416610.4;locus_tag=AC56_RS11050;product=Ni(II)/Co(II) efflux transporter accessory subunit RcnB;protein_id=WP_000153067.1;transl_table=11
NZ_JJLS01000208.1	RefSeq	pseudogene	4358	5278	.	-	.	ID=gene-AC56_RS11045;Name=AC56_RS11045;end_range=5278,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS11045;old_locus_tag=AC56_2461;partial=true;pseudo=true
NZ_JJLS01000208.1	Protein Homology	CDS	4358	5278	.	-	0	ID=cds-AC56_RS11045;Parent=gene-AC56_RS11045;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=5278,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416611.1;locus_tag=AC56_RS11045;partial=true;product=putative fimbrial-like adhesin protein;pseudo=true;transl_table=11
NZ_JJLS01000208.1	RefSeq	pseudogene	5332	5737	.	-	.	ID=gene-AC56_RS11040;Name=AC56_RS11040;end_range=5737,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS11040;old_locus_tag=AC56_2462;partial=true;pseudo=true
NZ_JJLS01000208.1	Protein Homology	CDS	5332	5737	.	-	1	ID=cds-AC56_RS11040;Parent=gene-AC56_RS11040;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=5737,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS11040;partial=true;product=IS5-like element IS903B family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000209.1 1 10106
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000209.1	RefSeq	region	1	10106	.	+	.	ID=NZ_JJLS01000209.1:1..10106;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000209.1	RefSeq	gene	1	380	.	-	.	ID=gene-AC56_RS32220;Name=AC56_RS32220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS32220;old_locus_tag=AC56_2463;partial=true;start_range=.,1
NZ_JJLS01000209.1	Protein Homology	CDS	1	380	.	-	0	ID=cds-WP_032282758.1;Parent=gene-AC56_RS32220;Dbxref=GenBank:WP_032282758.1;Name=WP_032282758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224844.1;locus_tag=AC56_RS32220;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032282758.1;start_range=.,1;transl_table=11
NZ_JJLS01000209.1	RefSeq	pseudogene	408	1880	.	-	.	ID=gene-AC56_RS11030;Name=AC56_RS11030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS11030;old_locus_tag=AC56_2464;partial=true;pseudo=true;start_range=.,408
NZ_JJLS01000209.1	Protein Homology	CDS	408	1880	.	-	0	ID=cds-AC56_RS11030;Parent=gene-AC56_RS11030;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416612.1;locus_tag=AC56_RS11030;partial=true;product=fimbrial biogenesis outer membrane usher protein;pseudo=true;start_range=.,408;transl_table=11
NZ_JJLS01000209.1	RefSeq	gene	1896	2570	.	-	.	ID=gene-AC56_RS11025;Name=yehC;gbkey=Gene;gene=yehC;gene_biotype=protein_coding;locus_tag=AC56_RS11025;old_locus_tag=AC56_2465
NZ_JJLS01000209.1	Protein Homology	CDS	1896	2570	.	-	0	ID=cds-WP_000677393.1;Parent=gene-AC56_RS11025;Dbxref=GenBank:WP_000677393.1;Name=WP_000677393.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;gene=yehC;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310943.1;locus_tag=AC56_RS11025;product=fimbria/pilus periplasmic chaperone;protein_id=WP_000677393.1;transl_table=11
NZ_JJLS01000209.1	RefSeq	gene	2650	3192	.	-	.	ID=gene-AC56_RS11020;Name=yehD;gbkey=Gene;gene=yehD;gene_biotype=protein_coding;locus_tag=AC56_RS11020;old_locus_tag=AC56_2466
NZ_JJLS01000209.1	Protein Homology	CDS	2650	3192	.	-	0	ID=cds-WP_032278555.1;Parent=gene-AC56_RS11020;Dbxref=GenBank:WP_032278555.1;Name=WP_032278555.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=yehD;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416614.1;locus_tag=AC56_RS11020;product=fimbrial protein;protein_id=WP_032278555.1;transl_table=11
NZ_JJLS01000209.1	RefSeq	gene	3486	3767	.	-	.	ID=gene-AC56_RS0126510;Name=yehE;gbkey=Gene;gene=yehE;gene_biotype=protein_coding;locus_tag=AC56_RS0126510
NZ_JJLS01000209.1	Protein Homology	CDS	3486	3767	.	-	0	ID=cds-WP_001324851.1;Parent=gene-AC56_RS0126510;Dbxref=GenBank:WP_001324851.1;Name=WP_001324851.1;gbkey=CDS;gene=yehE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416615.1;locus_tag=AC56_RS0126510;product=YehE family protein;protein_id=WP_001324851.1;transl_table=11
NZ_JJLS01000209.1	RefSeq	gene	4030	5139	.	-	.	ID=gene-AC56_RS11015;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=AC56_RS11015;old_locus_tag=AC56_2468
NZ_JJLS01000209.1	Protein Homology	CDS	4030	5139	.	-	0	ID=cds-WP_001005448.1;Parent=gene-AC56_RS11015;Dbxref=GenBank:WP_001005448.1;Name=WP_001005448.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310946.2;locus_tag=AC56_RS11015;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_001005448.1;transl_table=11
NZ_JJLS01000209.1	RefSeq	gene	5271	7304	.	+	.	ID=gene-AC56_RS11010;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=AC56_RS11010;old_locus_tag=AC56_2469
NZ_JJLS01000209.1	Protein Homology	CDS	5271	7304	.	+	0	ID=cds-WP_032282757.1;Parent=gene-AC56_RS11010;Dbxref=GenBank:WP_032282757.1;Name=WP_032282757.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310947.1;locus_tag=AC56_RS11010;product=methionine--tRNA ligase;protein_id=WP_032282757.1;transl_table=11
NZ_JJLS01000209.1	RefSeq	pseudogene	7445	8974	.	+	.	ID=gene-AC56_RS11005;Name=AC56_RS11005;end_range=8974,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS11005;old_locus_tag=AC56_2470;partial=true;pseudo=true
NZ_JJLS01000209.1	Protein Homology	CDS	7445	8974	.	+	0	ID=cds-AC56_RS11005;Parent=gene-AC56_RS11005;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=8974,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001215568.1;locus_tag=AC56_RS11005;partial=true;product=WGR domain-containing protein;pseudo=true;transl_table=11
NZ_JJLS01000209.1	RefSeq	gene	9146	10106	.	-	.	ID=gene-AC56_RS11000;Name=AC56_RS11000;end_range=10106,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS11000;old_locus_tag=AC56_2471;partial=true
NZ_JJLS01000209.1	Protein Homology	CDS	9146	10106	.	-	1	ID=cds-WP_032282478.1-11;Parent=gene-AC56_RS11000;Dbxref=GenBank:WP_032282478.1;Name=WP_032282478.1;Ontology_term=GO:0006313,GO:0004803;end_range=10106,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS11000;partial=true;product=IS4-like element IS421 family transposase;protein_id=WP_032282478.1;transl_table=11
##sequence-region NZ_JJLS01000210.1 1 10844
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000210.1	RefSeq	region	1	10844	.	+	.	ID=NZ_JJLS01000210.1:1..10844;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000210.1	RefSeq	pseudogene	1	333	.	-	.	ID=gene-AC56_RS10995;Name=AC56_RS10995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS10995;old_locus_tag=AC56_2472;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000210.1	Protein Homology	CDS	1	333	.	-	0	ID=cds-AC56_RS10995;Parent=gene-AC56_RS10995;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS10995;partial=true;product=IS4 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000210.1	RefSeq	pseudogene	390	2663	.	+	.	ID=gene-AC56_RS31400;Name=AC56_RS31400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS31400;old_locus_tag=AC56_2473;partial=true;pseudo=true;start_range=.,390
NZ_JJLS01000210.1	Protein Homology	CDS	390	2663	.	+	0	ID=cds-AC56_RS31400;Parent=gene-AC56_RS31400;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001215568.1;locus_tag=AC56_RS31400;partial=true;product=DUF4132 domain-containing protein;pseudo=true;start_range=.,390;transl_table=11
NZ_JJLS01000210.1	RefSeq	gene	2673	6305	.	+	.	ID=gene-AC56_RS10990;Name=yehI;gbkey=Gene;gene=yehI;gene_biotype=protein_coding;locus_tag=AC56_RS10990;old_locus_tag=AC56_2474
NZ_JJLS01000210.1	Protein Homology	CDS	2673	6305	.	+	0	ID=cds-WP_032278558.1;Parent=gene-AC56_RS10990;Dbxref=GenBank:WP_032278558.1;Name=WP_032278558.1;gbkey=CDS;gene=yehI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416621.1;locus_tag=AC56_RS10990;product=DUF4132 domain-containing protein YehI;protein_id=WP_032278558.1;transl_table=11
NZ_JJLS01000210.1	RefSeq	gene	6366	6683	.	+	.	ID=gene-AC56_RS0126520;Name=yehK;gbkey=Gene;gene=yehK;gene_biotype=protein_coding;locus_tag=AC56_RS0126520
NZ_JJLS01000210.1	Protein Homology	CDS	6366	6683	.	+	0	ID=cds-WP_000636918.1;Parent=gene-AC56_RS0126520;Dbxref=GenBank:WP_000636918.1;Name=WP_000636918.1;gbkey=CDS;gene=yehK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588459.1;locus_tag=AC56_RS0126520;product=protein YehK;protein_id=WP_000636918.1;transl_table=11
NZ_JJLS01000210.1	RefSeq	gene	6990	8078	.	+	.	ID=gene-AC56_RS10985;Name=yehL;gbkey=Gene;gene=yehL;gene_biotype=protein_coding;locus_tag=AC56_RS10985;old_locus_tag=AC56_2475
NZ_JJLS01000210.1	Protein Homology	CDS	6990	8078	.	+	0	ID=cds-WP_001430575.1;Parent=gene-AC56_RS10985;Dbxref=GenBank:WP_001430575.1;Name=WP_001430575.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yehL;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416623.2;locus_tag=AC56_RS10985;product=ATP-binding protein;protein_id=WP_001430575.1;transl_table=11
NZ_JJLS01000210.1	RefSeq	gene	8089	10368	.	+	.	ID=gene-AC56_RS10980;Name=yehM;gbkey=Gene;gene=yehM;gene_biotype=protein_coding;locus_tag=AC56_RS10980;old_locus_tag=AC56_2476
NZ_JJLS01000210.1	Protein Homology	CDS	8089	10368	.	+	0	ID=cds-WP_032278559.1;Parent=gene-AC56_RS10980;Dbxref=GenBank:WP_032278559.1;Name=WP_032278559.1;gbkey=CDS;gene=yehM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416624.1;locus_tag=AC56_RS10980;product=DUF5682 family protein;protein_id=WP_032278559.1;transl_table=11
NZ_JJLS01000210.1	RefSeq	pseudogene	10361	10456	.	+	.	ID=gene-AC56_RS33340;Name=AC56_RS33340;end_range=10456,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33340;partial=true;pseudo=true
NZ_JJLS01000210.1	Protein Homology	CDS	10361	10456	.	+	0	ID=cds-AC56_RS33340;Parent=gene-AC56_RS33340;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=10456,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310957.1;locus_tag=AC56_RS33340;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_JJLS01000210.1	RefSeq	gene	10490	10844	.	+	.	ID=gene-AC56_RS10975;Name=AC56_RS10975;end_range=10844,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS10975;old_locus_tag=AC56_2477;partial=true
NZ_JJLS01000210.1	Protein Homology	CDS	10490	10844	.	+	0	ID=cds-WP_032255955.1;Parent=gene-AC56_RS10975;Dbxref=GenBank:WP_032255955.1;Name=WP_032255955.1;end_range=10844,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS10975;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032255955.1;transl_table=11
##sequence-region NZ_JJLS01000211.1 1 57145
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000211.1	RefSeq	region	1	57145	.	+	.	ID=NZ_JJLS01000211.1:1..57145;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000211.1	RefSeq	pseudogene	1	412	.	+	.	ID=gene-AC56_RS10970;Name=AC56_RS10970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS10970;old_locus_tag=AC56_2478;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000211.1	Protein Homology	CDS	1	412	.	+	1	ID=cds-AC56_RS10970;Parent=gene-AC56_RS10970;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS10970;partial=true;product=IS5-like element IS903B family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000211.1	RefSeq	pseudogene	471	1517	.	+	.	ID=gene-AC56_RS10965;Name=yehP;gbkey=Gene;gene=yehP;gene_biotype=pseudogene;locus_tag=AC56_RS10965;old_locus_tag=AC56_2479;partial=true;pseudo=true;start_range=.,471
NZ_JJLS01000211.1	Protein Homology	CDS	471	1517	.	+	0	ID=cds-AC56_RS10965;Parent=gene-AC56_RS10965;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=yehP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416625.1;locus_tag=AC56_RS10965;partial=true;product=vWA domain-containing protein;pseudo=true;start_range=.,471;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	1514	3514	.	+	.	ID=gene-AC56_RS10960;Name=yehQ;gbkey=Gene;gene=yehQ;gene_biotype=protein_coding;locus_tag=AC56_RS10960;old_locus_tag=AC56_2480
NZ_JJLS01000211.1	Protein Homology	CDS	1514	3514	.	+	0	ID=cds-WP_032278564.1;Parent=gene-AC56_RS10960;Dbxref=GenBank:WP_032278564.1;Name=WP_032278564.1;Ontology_term=GO:0008270;gbkey=CDS;gene=yehQ;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708010.2;locus_tag=AC56_RS10960;product=SWIM zinc finger family protein;protein_id=WP_032278564.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	3639	4100	.	+	.	ID=gene-AC56_RS10955;Name=yehR;gbkey=Gene;gene=yehR;gene_biotype=protein_coding;locus_tag=AC56_RS10955;old_locus_tag=AC56_2481
NZ_JJLS01000211.1	Protein Homology	CDS	3639	4100	.	+	0	ID=cds-WP_001295429.1;Parent=gene-AC56_RS10955;Dbxref=GenBank:WP_001295429.1;Name=WP_001295429.1;gbkey=CDS;gene=yehR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416627.2;locus_tag=AC56_RS10955;product=YehR family lipoprotein;protein_id=WP_001295429.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	4140	4610	.	-	.	ID=gene-AC56_RS10950;Name=yehS;gbkey=Gene;gene=yehS;gene_biotype=protein_coding;locus_tag=AC56_RS10950;old_locus_tag=AC56_2482
NZ_JJLS01000211.1	Protein Homology	CDS	4140	4610	.	-	0	ID=cds-WP_000950409.1;Parent=gene-AC56_RS10950;Dbxref=GenBank:WP_000950409.1;Name=WP_000950409.1;gbkey=CDS;gene=yehS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416628.1;locus_tag=AC56_RS10950;product=DUF1456 family protein;protein_id=WP_000950409.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	4657	5376	.	-	.	ID=gene-AC56_RS10945;Name=btsR;gbkey=Gene;gene=btsR;gene_biotype=protein_coding;gene_synonym=yehT;locus_tag=AC56_RS10945;old_locus_tag=AC56_2483
NZ_JJLS01000211.1	Protein Homology	CDS	4657	5376	.	-	0	ID=cds-WP_000598641.1;Parent=gene-AC56_RS10945;Dbxref=GenBank:WP_000598641.1;Name=WP_000598641.1;gbkey=CDS;gene=btsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310963.2;locus_tag=AC56_RS10945;product=two-component system response regulator BtsR;protein_id=WP_000598641.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	5373	7058	.	-	.	ID=gene-AC56_RS10940;Name=btsS;gbkey=Gene;gene=btsS;gene_biotype=protein_coding;locus_tag=AC56_RS10940;old_locus_tag=AC56_2484
NZ_JJLS01000211.1	Protein Homology	CDS	5373	7058	.	-	0	ID=cds-WP_001295431.1;Parent=gene-AC56_RS10940;Dbxref=GenBank:WP_001295431.1;Name=WP_001295431.1;gbkey=CDS;gene=btsS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416630.1;locus_tag=AC56_RS10940;product=two-component regulatory system sensor histidine kinase BtsS;protein_id=WP_001295431.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	7280	8011	.	+	.	ID=gene-AC56_RS10935;Name=mlrA;gbkey=Gene;gene=mlrA;gene_biotype=protein_coding;locus_tag=AC56_RS10935;old_locus_tag=AC56_2485
NZ_JJLS01000211.1	Protein Homology	CDS	7280	8011	.	+	0	ID=cds-WP_001240401.1;Parent=gene-AC56_RS10935;Dbxref=GenBank:WP_001240401.1;Name=WP_001240401.1;gbkey=CDS;gene=mlrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416631.1;locus_tag=AC56_RS10935;product=HTH-type transcriptional regulator MlrA;protein_id=WP_001240401.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	8071	8178	.	+	.	ID=gene-AC56_RS0126525;Name=yohO;gbkey=Gene;gene=yohO;gene_biotype=protein_coding;locus_tag=AC56_RS0126525
NZ_JJLS01000211.1	Protein Homology	CDS	8071	8178	.	+	0	ID=cds-WP_001216963.1;Parent=gene-AC56_RS0126525;Dbxref=GenBank:WP_001216963.1;Name=WP_001216963.1;gbkey=CDS;gene=yohO;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588460.1;locus_tag=AC56_RS0126525;product=protein YohO;protein_id=WP_001216963.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	8159	8890	.	-	.	ID=gene-AC56_RS10930;Name=yehW;gbkey=Gene;gene=yehW;gene_biotype=protein_coding;locus_tag=AC56_RS10930;old_locus_tag=AC56_2486
NZ_JJLS01000211.1	Protein Homology	CDS	8159	8890	.	-	0	ID=cds-WP_000783120.1;Parent=gene-AC56_RS10930;Dbxref=GenBank:WP_000783120.1;Name=WP_000783120.1;gbkey=CDS;gene=yehW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311042.1;locus_tag=AC56_RS10930;product=glycine betaine ABC transporter permease YehW;protein_id=WP_000783120.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	8895	9821	.	-	.	ID=gene-AC56_RS10925;Name=yehX;gbkey=Gene;gene=yehX;gene_biotype=protein_coding;locus_tag=AC56_RS10925;old_locus_tag=AC56_2487
NZ_JJLS01000211.1	Protein Homology	CDS	8895	9821	.	-	0	ID=cds-WP_000569358.1;Parent=gene-AC56_RS10925;Dbxref=GenBank:WP_000569358.1;Name=WP_000569358.1;gbkey=CDS;gene=yehX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708030.1;locus_tag=AC56_RS10925;product=glycine betaine ABC transporter ATP binding protein YehX;protein_id=WP_000569358.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	9814	10971	.	-	.	ID=gene-AC56_RS10920;Name=yehY;gbkey=Gene;gene=yehY;gene_biotype=protein_coding;locus_tag=AC56_RS10920;old_locus_tag=AC56_2488
NZ_JJLS01000211.1	Protein Homology	CDS	9814	10971	.	-	0	ID=cds-WP_000221784.1;Parent=gene-AC56_RS10920;Dbxref=GenBank:WP_000221784.1;Name=WP_000221784.1;gbkey=CDS;gene=yehY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311044.1;locus_tag=AC56_RS10920;product=glycine betaine ABC transporter permease YehY;protein_id=WP_000221784.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	10978	11895	.	-	.	ID=gene-AC56_RS10915;Name=osmF;gbkey=Gene;gene=osmF;gene_biotype=protein_coding;locus_tag=AC56_RS10915;old_locus_tag=AC56_2489
NZ_JJLS01000211.1	Protein Homology	CDS	10978	11895	.	-	0	ID=cds-WP_001131254.1;Parent=gene-AC56_RS10915;Dbxref=GenBank:WP_001131254.1;Name=WP_001131254.1;Ontology_term=GO:0031460,GO:0022857;gbkey=CDS;gene=osmF;go_function=transmembrane transporter activity|0022857||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311045.1;locus_tag=AC56_RS10915;product=glycine betaine ABC transporter substrate-binding protein OsmF;protein_id=WP_001131254.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	12147	14444	.	-	.	ID=gene-AC56_RS10910;Name=bglX;gbkey=Gene;gene=bglX;gene_biotype=protein_coding;locus_tag=AC56_RS10910;old_locus_tag=AC56_2490
NZ_JJLS01000211.1	Protein Homology	CDS	12147	14444	.	-	0	ID=cds-WP_000871512.1;Parent=gene-AC56_RS10910;Dbxref=GenBank:WP_000871512.1;Name=WP_000871512.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bglX;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416636.1;locus_tag=AC56_RS10910;product=beta-glucosidase BglX;protein_id=WP_000871512.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	14640	16355	.	+	.	ID=gene-AC56_RS10905;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=AC56_RS10905;old_locus_tag=AC56_2491
NZ_JJLS01000211.1	Protein Homology	CDS	14640	16355	.	+	0	ID=cds-WP_000097369.1;Parent=gene-AC56_RS10905;Dbxref=GenBank:WP_000097369.1;Name=WP_000097369.1;Ontology_term=GO:0006089,GO:0016901;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311047.1;locus_tag=AC56_RS10905;product=D-lactate dehydrogenase;protein_id=WP_000097369.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	16393	17325	.	-	.	ID=gene-AC56_RS10900;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=AC56_RS10900;old_locus_tag=AC56_2492
NZ_JJLS01000211.1	Protein Homology	CDS	16393	17325	.	-	0	ID=cds-WP_001295432.1;Parent=gene-AC56_RS10900;Dbxref=GenBank:WP_001295432.1;Name=WP_001295432.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311048.2;locus_tag=AC56_RS10900;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_001295432.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	17499	18086	.	-	.	ID=gene-AC56_RS10895;Name=yohC;gbkey=Gene;gene=yohC;gene_biotype=protein_coding;locus_tag=AC56_RS10895;old_locus_tag=AC56_2493
NZ_JJLS01000211.1	Protein Homology	CDS	17499	18086	.	-	0	ID=cds-WP_001295454.1;Parent=gene-AC56_RS10895;Dbxref=GenBank:WP_001295454.1;Name=WP_001295454.1;Ontology_term=GO:0016192,GO:0031267;gbkey=CDS;gene=yohC;go_function=small GTPase binding|0031267||IEA;go_process=vesicle-mediated transport|0016192||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170891.1;locus_tag=AC56_RS10895;product=Yip1 family protein;protein_id=WP_001295454.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	18256	18834	.	+	.	ID=gene-AC56_RS10890;Name=yohD;gbkey=Gene;gene=yohD;gene_biotype=protein_coding;locus_tag=AC56_RS10890;old_locus_tag=AC56_2494
NZ_JJLS01000211.1	Protein Homology	CDS	18256	18834	.	+	0	ID=cds-WP_000365433.1;Parent=gene-AC56_RS10890;Dbxref=GenBank:WP_000365433.1;Name=WP_000365433.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yohD;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416640.2;locus_tag=AC56_RS10890;product=DedA family protein;protein_id=WP_000365433.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	18964	19725	.	-	.	ID=gene-AC56_RS10885;Name=yohF;gbkey=Gene;gene=yohF;gene_biotype=protein_coding;locus_tag=AC56_RS10885;old_locus_tag=AC56_2495
NZ_JJLS01000211.1	Protein Homology	CDS	18964	19725	.	-	0	ID=cds-WP_000079526.1;Parent=gene-AC56_RS10885;Dbxref=GenBank:WP_000079526.1;Name=WP_000079526.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yohF;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311051.1;locus_tag=AC56_RS10885;product=SDR family oxidoreductase;protein_id=WP_000079526.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	19778	21214	.	-	.	ID=gene-AC56_RS10880;Name=mdtQ;gbkey=Gene;gene=mdtQ;gene_biotype=protein_coding;locus_tag=AC56_RS10880;old_locus_tag=AC56_2496
NZ_JJLS01000211.1	Protein Homology	CDS	19778	21214	.	-	0	ID=cds-WP_032278567.1;Parent=gene-AC56_RS10880;Dbxref=GenBank:WP_032278567.1;Name=WP_032278567.1;Ontology_term=GO:0055085,GO:0015562,GO:0016020;gbkey=CDS;gene=mdtQ;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001583680.1;locus_tag=AC56_RS10880;product=multidrug resistance outer membrane protein MdtQ;protein_id=WP_032278567.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	21438	21521	.	+	.	ID=gene-AC56_RS0126530;Name=yohP;gbkey=Gene;gene=yohP;gene_biotype=protein_coding;locus_tag=AC56_RS0126530
NZ_JJLS01000211.1	Protein Homology	CDS	21438	21521	.	+	0	ID=cds-WP_000691708.1;Parent=gene-AC56_RS0126530;Dbxref=GenBank:WP_000691708.1;Name=WP_000691708.1;gbkey=CDS;gene=yohP;inference=COORDINATES: protein motif:HMM:NF011345.0;locus_tag=AC56_RS0126530;product=small membrane protein YohP;protein_id=WP_000691708.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	21909	22859	.	-	.	ID=gene-AC56_RS10875;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;locus_tag=AC56_RS10875;old_locus_tag=AC56_2497
NZ_JJLS01000211.1	Protein Homology	CDS	21909	22859	.	-	0	ID=cds-WP_001264872.1;Parent=gene-AC56_RS10875;Dbxref=GenBank:WP_001264872.1;Name=WP_001264872.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusC;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311053.1;locus_tag=AC56_RS10875;product=tRNA dihydrouridine(16) synthase DusC;protein_id=WP_001264872.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	23098	23496	.	+	.	ID=gene-AC56_RS10870;Name=yohJ;gbkey=Gene;gene=yohJ;gene_biotype=protein_coding;locus_tag=AC56_RS10870;old_locus_tag=AC56_2498
NZ_JJLS01000211.1	Protein Homology	CDS	23098	23496	.	+	0	ID=cds-WP_001295452.1;Parent=gene-AC56_RS10870;Dbxref=GenBank:WP_001295452.1;Name=WP_001295452.1;gbkey=CDS;gene=yohJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416646.1;locus_tag=AC56_RS10870;product=CidA/LrgA family protein;protein_id=WP_001295452.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	23493	24188	.	+	.	ID=gene-AC56_RS10865;Name=yohK;gbkey=Gene;gene=yohK;gene_biotype=protein_coding;locus_tag=AC56_RS10865;old_locus_tag=AC56_2499
NZ_JJLS01000211.1	Protein Homology	CDS	23493	24188	.	+	0	ID=cds-WP_000968208.1;Parent=gene-AC56_RS10865;Dbxref=GenBank:WP_000968208.1;Name=WP_000968208.1;gbkey=CDS;gene=yohK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416647.1;locus_tag=AC56_RS10865;product=CidB/LrgB family autolysis modulator;protein_id=WP_000968208.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	24318	25202	.	+	.	ID=gene-AC56_RS10860;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=AC56_RS10860;old_locus_tag=AC56_2500
NZ_JJLS01000211.1	Protein Homology	CDS	24318	25202	.	+	0	ID=cds-WP_000553555.1;Parent=gene-AC56_RS10860;Dbxref=GenBank:WP_000553555.1;Name=WP_000553555.1;Ontology_term=GO:0009972,GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=cytidine deamination|0009972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416648.1;locus_tag=AC56_RS10860;product=cytidine deaminase;protein_id=WP_000553555.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	25352	26071	.	+	.	ID=gene-AC56_RS10855;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=AC56_RS10855;old_locus_tag=AC56_2501
NZ_JJLS01000211.1	Protein Homology	CDS	25352	26071	.	+	0	ID=cds-WP_000920064.1;Parent=gene-AC56_RS10855;Dbxref=GenBank:WP_000920064.1;Name=WP_000920064.1;gbkey=CDS;gene=sanA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311063.1;locus_tag=AC56_RS10855;product=outer membrane permeability protein SanA;protein_id=WP_000920064.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	26074	26313	.	+	.	ID=gene-AC56_RS10850;Name=yeiS;gbkey=Gene;gene=yeiS;gene_biotype=protein_coding;locus_tag=AC56_RS10850;old_locus_tag=AC56_2502
NZ_JJLS01000211.1	Protein Homology	CDS	26074	26313	.	+	0	ID=cds-WP_000383096.1;Parent=gene-AC56_RS10850;Dbxref=GenBank:WP_000383096.1;Name=WP_000383096.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yeiS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311064.1;locus_tag=AC56_RS10850;product=DUF2542 family protein;protein_id=WP_000383096.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	26507	27745	.	+	.	ID=gene-AC56_RS10845;Name=preT;gbkey=Gene;gene=preT;gene_biotype=protein_coding;locus_tag=AC56_RS10845;old_locus_tag=AC56_2503
NZ_JJLS01000211.1	Protein Homology	CDS	26507	27745	.	+	0	ID=cds-WP_001136389.1;Parent=gene-AC56_RS10845;Dbxref=GenBank:WP_001136389.1;Name=WP_001136389.1;gbkey=CDS;gene=preT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416651.1;locus_tag=AC56_RS10845;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreT;protein_id=WP_001136389.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	27739	28974	.	+	.	ID=gene-AC56_RS10840;Name=preA;gbkey=Gene;gene=preA;gene_biotype=protein_coding;locus_tag=AC56_RS10840;old_locus_tag=AC56_2504
NZ_JJLS01000211.1	Protein Homology	CDS	27739	28974	.	+	0	ID=cds-WP_032278569.1;Parent=gene-AC56_RS10840;Dbxref=GenBank:WP_032278569.1;Name=WP_032278569.1;Ontology_term=GO:0006210,GO:0006212,GO:0017113;gbkey=CDS;gene=preA;go_function=dihydropyrimidine dehydrogenase (NADP+) activity|0017113||IEA;go_process=thymine catabolic process|0006210||IEA,uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416652.4;locus_tag=AC56_RS10840;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;protein_id=WP_032278569.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	29217	30227	.	-	.	ID=gene-AC56_RS10835;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=AC56_RS10835;old_locus_tag=AC56_2506
NZ_JJLS01000211.1	Protein Homology	CDS	29217	30227	.	-	0	ID=cds-WP_001275118.1;Parent=gene-AC56_RS10835;Dbxref=GenBank:WP_001275118.1;Name=WP_001275118.1;Ontology_term=GO:0008643,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mglC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129205.1;locus_tag=AC56_RS10835;product=galactose/methyl galactoside ABC transporter permease MglC;protein_id=WP_001275118.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	30243	31763	.	-	.	ID=gene-AC56_RS10830;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=protein_coding;locus_tag=AC56_RS10830;old_locus_tag=AC56_2507
NZ_JJLS01000211.1	Protein Homology	CDS	30243	31763	.	-	0	ID=cds-WP_000255039.1;Parent=gene-AC56_RS10830;Dbxref=GenBank:WP_000255039.1;Name=WP_000255039.1;Ontology_term=GO:0008643,GO:0005524,GO:0043211,GO:0016020;gbkey=CDS;gene=mglA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type carbohydrate transporter activity|0043211||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883197.1;locus_tag=AC56_RS10830;product=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;protein_id=WP_000255039.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	31824	32822	.	-	.	ID=gene-AC56_RS10825;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=AC56_RS10825;old_locus_tag=AC56_2508
NZ_JJLS01000211.1	Protein Homology	CDS	31824	32822	.	-	0	ID=cds-WP_001036964.1;Parent=gene-AC56_RS10825;Dbxref=GenBank:WP_001036964.1;Name=WP_001036964.1;Ontology_term=GO:0030246;gbkey=CDS;gene=mglB;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416655.1;locus_tag=AC56_RS10825;product=galactose/glucose ABC transporter substrate-binding protein MglB;protein_id=WP_001036964.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	33102	34142	.	-	.	ID=gene-AC56_RS10820;Name=galS;gbkey=Gene;gene=galS;gene_biotype=protein_coding;locus_tag=AC56_RS10820;old_locus_tag=AC56_2509
NZ_JJLS01000211.1	Protein Homology	CDS	33102	34142	.	-	0	ID=cds-WP_000628659.1;Parent=gene-AC56_RS10820;Dbxref=GenBank:WP_000628659.1;Name=WP_000628659.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708050.2;locus_tag=AC56_RS10820;product=HTH-type transcriptional regulator GalS;protein_id=WP_000628659.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	34284	35441	.	-	.	ID=gene-AC56_RS10815;Name=yeiB;gbkey=Gene;gene=yeiB;gene_biotype=protein_coding;locus_tag=AC56_RS10815;old_locus_tag=AC56_2510
NZ_JJLS01000211.1	Protein Homology	CDS	34284	35441	.	-	0	ID=cds-WP_000440919.1;Parent=gene-AC56_RS10815;Dbxref=GenBank:WP_000440919.1;Name=WP_000440919.1;gbkey=CDS;gene=yeiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311071.1;locus_tag=AC56_RS10815;product=DUF418 domain-containing protein YeiB;protein_id=WP_000440919.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	35458	36126	.	-	.	ID=gene-AC56_RS10810;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=AC56_RS10810;old_locus_tag=AC56_2511
NZ_JJLS01000211.1	Protein Homology	CDS	35458	36126	.	-	0	ID=cds-WP_001139613.1;Parent=gene-AC56_RS10810;Dbxref=GenBank:WP_001139613.1;Name=WP_001139613.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311072.1;locus_tag=AC56_RS10810;product=GTP cyclohydrolase I FolE;protein_id=WP_001139613.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	36384	37220	.	+	.	ID=gene-AC56_RS10805;Name=yeiG;gbkey=Gene;gene=yeiG;gene_biotype=protein_coding;locus_tag=AC56_RS10805;old_locus_tag=AC56_2512
NZ_JJLS01000211.1	Protein Homology	CDS	36384	37220	.	+	0	ID=cds-WP_000425438.1;Parent=gene-AC56_RS10805;Dbxref=GenBank:WP_000425438.1;Name=WP_000425438.1;gbkey=CDS;gene=yeiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416659.1;locus_tag=AC56_RS10805;product=S-formylglutathione hydrolase;protein_id=WP_000425438.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	37252	39243	.	-	.	ID=gene-AC56_RS10800;Name=cirA;gbkey=Gene;gene=cirA;gene_biotype=protein_coding;locus_tag=AC56_RS10800;old_locus_tag=AC56_2513
NZ_JJLS01000211.1	Protein Homology	CDS	37252	39243	.	-	0	ID=cds-WP_032278572.1;Parent=gene-AC56_RS10800;Dbxref=GenBank:WP_032278572.1;Name=WP_032278572.1;gbkey=CDS;gene=cirA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416660.1;locus_tag=AC56_RS10800;product=catecholate siderophore receptor CirA;protein_id=WP_032278572.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	39537	41006	.	-	.	ID=gene-AC56_RS10795;Name=lysP;gbkey=Gene;gene=lysP;gene_biotype=protein_coding;locus_tag=AC56_RS10795;old_locus_tag=AC56_2515
NZ_JJLS01000211.1	Protein Homology	CDS	39537	41006	.	-	0	ID=cds-WP_000253273.1;Parent=gene-AC56_RS10795;Dbxref=GenBank:WP_000253273.1;Name=WP_000253273.1;gbkey=CDS;gene=lysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416661.1;locus_tag=AC56_RS10795;product=lysine-specific permease;protein_id=WP_000253273.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	41211	42092	.	-	.	ID=gene-AC56_RS10790;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=AC56_RS10790;old_locus_tag=AC56_2517
NZ_JJLS01000211.1	Protein Homology	CDS	41211	42092	.	-	0	ID=cds-WP_000548294.1;Parent=gene-AC56_RS10790;Dbxref=GenBank:WP_000548294.1;Name=WP_000548294.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yieE;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311076.1;locus_tag=AC56_RS10790;product=DNA-binding transcriptional regulator YeiE;protein_id=WP_000548294.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	42191	43240	.	+	.	ID=gene-AC56_RS10785;Name=yeiH;gbkey=Gene;gene=yeiH;gene_biotype=protein_coding;locus_tag=AC56_RS10785;old_locus_tag=AC56_2518
NZ_JJLS01000211.1	Protein Homology	CDS	42191	43240	.	+	0	ID=cds-WP_000182053.1;Parent=gene-AC56_RS10785;Dbxref=GenBank:WP_000182053.1;Name=WP_000182053.1;gbkey=CDS;gene=yeiH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311077.1;locus_tag=AC56_RS10785;product=YeiH family protein;protein_id=WP_000182053.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	43314	44171	.	+	.	ID=gene-AC56_RS10780;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=AC56_RS10780;old_locus_tag=AC56_2519
NZ_JJLS01000211.1	Protein Homology	CDS	43314	44171	.	+	0	ID=cds-WP_000873890.1;Parent=gene-AC56_RS10780;Dbxref=GenBank:WP_000873890.1;Name=WP_000873890.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=nfo;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311078.1;locus_tag=AC56_RS10780;product=deoxyribonuclease IV;protein_id=WP_000873890.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	44174	45262	.	+	.	ID=gene-AC56_RS10775;Name=yeiI;gbkey=Gene;gene=yeiI;gene_biotype=protein_coding;locus_tag=AC56_RS10775;old_locus_tag=AC56_2520
NZ_JJLS01000211.1	Protein Homology	CDS	44174	45262	.	+	0	ID=cds-WP_032282763.1;Parent=gene-AC56_RS10775;Dbxref=GenBank:WP_032282763.1;Name=WP_032282763.1;gbkey=CDS;gene=yeiI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416665.1;locus_tag=AC56_RS10775;product=sugar kinase;protein_id=WP_032282763.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	45318	46568	.	-	.	ID=gene-AC56_RS10770;Name=nupX;gbkey=Gene;gene=nupX;gene_biotype=protein_coding;locus_tag=AC56_RS10770;old_locus_tag=AC56_2521
NZ_JJLS01000211.1	Protein Homology	CDS	45318	46568	.	-	0	ID=cds-WP_032278575.1;Parent=gene-AC56_RS10770;Dbxref=GenBank:WP_032278575.1;Name=WP_032278575.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;gene=nupX;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416666.1;locus_tag=AC56_RS10770;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_032278575.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	46719	47609	.	-	.	ID=gene-AC56_RS10765;Name=rihB;gbkey=Gene;gene=rihB;gene_biotype=protein_coding;locus_tag=AC56_RS10765;old_locus_tag=AC56_2522
NZ_JJLS01000211.1	Protein Homology	CDS	46719	47609	.	-	0	ID=cds-WP_050439696.1;Parent=gene-AC56_RS10765;Dbxref=GenBank:WP_050439696.1;Name=WP_050439696.1;gbkey=CDS;gene=rihB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416667.1;locus_tag=AC56_RS10765;product=ribosylpyrimidine nucleosidase;protein_id=WP_050439696.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	47739	48437	.	+	.	ID=gene-AC56_RS10760;Name=yeiL;gbkey=Gene;gene=yeiL;gene_biotype=protein_coding;locus_tag=AC56_RS10760;old_locus_tag=AC56_2523
NZ_JJLS01000211.1	Protein Homology	CDS	47739	48437	.	+	0	ID=cds-WP_000658583.1;Parent=gene-AC56_RS10760;Dbxref=GenBank:WP_000658583.1;Name=WP_000658583.1;gbkey=CDS;gene=yeiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311082.4;locus_tag=AC56_RS10760;product=transcriptional regulator YeiL;protein_id=WP_000658583.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	48508	49758	.	-	.	ID=gene-AC56_RS10755;Name=AC56_RS10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS10755;old_locus_tag=AC56_2524
NZ_JJLS01000211.1	Protein Homology	CDS	48508	49758	.	-	0	ID=cds-WP_000353878.1;Parent=gene-AC56_RS10755;Dbxref=GenBank:WP_000353878.1;Name=WP_000353878.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416669.1;locus_tag=AC56_RS10755;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_000353878.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	49852	50790	.	-	.	ID=gene-AC56_RS10750;Name=psuG;gbkey=Gene;gene=psuG;gene_biotype=protein_coding;locus_tag=AC56_RS10750;old_locus_tag=AC56_2525
NZ_JJLS01000211.1	Protein Homology	CDS	49852	50790	.	-	0	ID=cds-WP_032278577.1;Parent=gene-AC56_RS10750;Dbxref=GenBank:WP_032278577.1;Name=WP_032278577.1;gbkey=CDS;gene=psuG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708062.1;locus_tag=AC56_RS10750;product=pseudouridine-5'-phosphate glycosidase;protein_id=WP_032278577.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	50778	51719	.	-	.	ID=gene-AC56_RS10745;Name=psuK;gbkey=Gene;gene=psuK;gene_biotype=protein_coding;locus_tag=AC56_RS10745;old_locus_tag=AC56_2526
NZ_JJLS01000211.1	Protein Homology	CDS	50778	51719	.	-	0	ID=cds-WP_001208132.1;Parent=gene-AC56_RS10745;Dbxref=GenBank:WP_001208132.1;Name=WP_001208132.1;gbkey=CDS;gene=psuK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708063.1;locus_tag=AC56_RS10745;product=pseudouridine kinase;protein_id=WP_001208132.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	52143	53834	.	-	.	ID=gene-AC56_RS10740;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=AC56_RS10740;old_locus_tag=AC56_2527
NZ_JJLS01000211.1	Protein Homology	CDS	52143	53834	.	-	0	ID=cds-WP_000854459.1;Parent=gene-AC56_RS10740;Dbxref=GenBank:WP_000854459.1;Name=WP_000854459.1;Ontology_term=GO:0009401,GO:0008982,GO:0022877;gbkey=CDS;gene=fruA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416672.1;locus_tag=AC56_RS10740;product=PTS fructose transporter subunit IIBC;protein_id=WP_000854459.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	53851	54789	.	-	.	ID=gene-AC56_RS10735;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=AC56_RS10735;old_locus_tag=AC56_2528
NZ_JJLS01000211.1	Protein Homology	CDS	53851	54789	.	-	0	ID=cds-WP_000091263.1;Parent=gene-AC56_RS10735;Dbxref=GenBank:WP_000091263.1;Name=WP_000091263.1;Ontology_term=GO:0008662,GO:0016773;gbkey=CDS;gene=fruK;go_function=1-phosphofructokinase activity|0008662||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311087.1;locus_tag=AC56_RS10735;product=1-phosphofructokinase;protein_id=WP_000091263.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	54789	55919	.	-	.	ID=gene-AC56_RS10730;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=protein_coding;locus_tag=AC56_RS10730;old_locus_tag=AC56_2529
NZ_JJLS01000211.1	Protein Homology	CDS	54789	55919	.	-	0	ID=cds-WP_000487247.1;Parent=gene-AC56_RS10730;Dbxref=GenBank:WP_000487247.1;Name=WP_000487247.1;gbkey=CDS;gene=fruB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311088.1;locus_tag=AC56_RS10730;product=fused PTS fructose transporter subunit IIA/HPr protein;protein_id=WP_000487247.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	pseudogene	56287	56634	.	+	.	ID=gene-AC56_RS10725;Name=AC56_RS10725;end_range=56634,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS10725;old_locus_tag=AC56_2532;partial=true;pseudo=true
NZ_JJLS01000211.1	Protein Homology	CDS	56287	56634	.	+	0	ID=cds-AC56_RS10725;Parent=gene-AC56_RS10725;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0022857;end_range=56634,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416675.1;locus_tag=AC56_RS10725;partial=true;product=MFS transporter;pseudo=true;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	56611	56799	.	-	.	ID=gene-AC56_RS33785;Name=AC56_RS33785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33785
NZ_JJLS01000211.1	Protein Homology	CDS	56611	56799	.	-	0	ID=cds-WP_315696846.1;Parent=gene-AC56_RS33785;Dbxref=GenBank:WP_315696846.1;Name=WP_315696846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001340235.1;locus_tag=AC56_RS33785;product=hypothetical protein;protein_id=WP_315696846.1;transl_table=11
NZ_JJLS01000211.1	RefSeq	gene	56781	57145	.	-	.	ID=gene-AC56_RS0126545;Name=AC56_RS0126545;end_range=57145,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0126545;old_locus_tag=AC56_2533;partial=true
NZ_JJLS01000211.1	Protein Homology	CDS	56781	57145	.	-	2	ID=cds-WP_032282764.1;Parent=gene-AC56_RS0126545;Dbxref=GenBank:WP_032282764.1;Name=WP_032282764.1;end_range=57145,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS0126545;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032282764.1;transl_table=11
##sequence-region NZ_JJLS01000212.1 1 99674
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000212.1	RefSeq	region	1	99674	.	+	.	ID=NZ_JJLS01000212.1:1..99674;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000212.1	RefSeq	gene	1	351	.	-	.	ID=gene-AC56_RS10720;Name=AC56_RS10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS10720;old_locus_tag=AC56_2534;partial=true;start_range=.,1
NZ_JJLS01000212.1	Protein Homology	CDS	1	351	.	-	0	ID=cds-WP_032282505.1-2;Parent=gene-AC56_RS10720;Dbxref=GenBank:WP_032282505.1;Name=WP_032282505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS10720;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032282505.1;start_range=.,1;transl_table=11
NZ_JJLS01000212.1	RefSeq	pseudogene	407	1258	.	+	.	ID=gene-AC56_RS10715;Name=AC56_RS10715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS10715;old_locus_tag=AC56_2535;partial=true;pseudo=true;start_range=.,407
NZ_JJLS01000212.1	Protein Homology	CDS	407	1258	.	+	0	ID=cds-AC56_RS10715;Parent=gene-AC56_RS10715;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311089.1;locus_tag=AC56_RS10715;partial=true;product=MFS transporter;pseudo=true;start_range=.,407;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	1255	1509	.	-	.	ID=gene-AC56_RS0126550;Name=yeiW;gbkey=Gene;gene=yeiW;gene_biotype=protein_coding;locus_tag=AC56_RS0126550;old_locus_tag=AC56_2536
NZ_JJLS01000212.1	Protein Homology	CDS	1255	1509	.	-	0	ID=cds-WP_000389030.1;Parent=gene-AC56_RS0126550;Dbxref=GenBank:WP_000389030.1;Name=WP_000389030.1;Ontology_term=GO:0051536;gbkey=CDS;gene=yeiW;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588461.1;locus_tag=AC56_RS0126550;product=YkgJ family cysteine cluster protein;protein_id=WP_000389030.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	1664	2236	.	+	.	ID=gene-AC56_RS10710;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=AC56_RS10710;old_locus_tag=AC56_2538
NZ_JJLS01000212.1	Protein Homology	CDS	1664	2236	.	+	0	ID=cds-WP_001136827.1;Parent=gene-AC56_RS10710;Dbxref=GenBank:WP_001136827.1;Name=WP_001136827.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007750416.1;locus_tag=AC56_RS10710;product=elongation factor P-like protein YeiP;protein_id=WP_001136827.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	2459	3925	.	+	.	ID=gene-AC56_RS10705;Name=yeiQ;gbkey=Gene;gene=yeiQ;gene_biotype=protein_coding;locus_tag=AC56_RS10705;old_locus_tag=AC56_2539
NZ_JJLS01000212.1	Protein Homology	CDS	2459	3925	.	+	0	ID=cds-WP_000848223.1;Parent=gene-AC56_RS10705;Dbxref=GenBank:WP_000848223.1;Name=WP_000848223.1;Ontology_term=GO:0016616;gbkey=CDS;gene=yeiQ;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416677.1;locus_tag=AC56_RS10705;product=mannitol dehydrogenase family protein;protein_id=WP_000848223.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	4043	5029	.	+	.	ID=gene-AC56_RS10700;Name=yeiR;gbkey=Gene;gene=yeiR;gene_biotype=protein_coding;locus_tag=AC56_RS10700;old_locus_tag=AC56_2540
NZ_JJLS01000212.1	Protein Homology	CDS	4043	5029	.	+	0	ID=cds-WP_000198828.1;Parent=gene-AC56_RS10700;Dbxref=GenBank:WP_000198828.1;Name=WP_000198828.1;gbkey=CDS;gene=yeiR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416678.1;locus_tag=AC56_RS10700;product=zinc-binding GTPase YeiR;protein_id=WP_000198828.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	5068	5781	.	+	.	ID=gene-AC56_RS10695;Name=lpxT;gbkey=Gene;gene=lpxT;gene_biotype=protein_coding;locus_tag=AC56_RS10695;old_locus_tag=AC56_2541
NZ_JJLS01000212.1	Protein Homology	CDS	5068	5781	.	+	0	ID=cds-WP_000594599.1;Parent=gene-AC56_RS10695;Dbxref=GenBank:WP_000594599.1;Name=WP_000594599.1;gbkey=CDS;gene=lpxT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311093.2;locus_tag=AC56_RS10695;product=Kdo(2)-lipid A phosphotransferase;protein_id=WP_000594599.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	6193	6759	.	+	.	ID=gene-AC56_RS0126555;Name=mepS;gbkey=Gene;gene=mepS;gene_biotype=protein_coding;locus_tag=AC56_RS0126555;old_locus_tag=AC56_2542
NZ_JJLS01000212.1	Protein Homology	CDS	6193	6759	.	+	0	ID=cds-WP_000241011.1;Parent=gene-AC56_RS0126555;Dbxref=GenBank:WP_000241011.1;Name=WP_000241011.1;gbkey=CDS;gene=mepS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311094.1;locus_tag=AC56_RS0126555;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;protein_id=WP_000241011.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	6940	8496	.	+	.	ID=gene-AC56_RS10690;Name=pdeN;gbkey=Gene;gene=pdeN;gene_biotype=protein_coding;locus_tag=AC56_RS10690;old_locus_tag=AC56_2543
NZ_JJLS01000212.1	Protein Homology	CDS	6940	8496	.	+	0	ID=cds-WP_000470573.1;Parent=gene-AC56_RS10690;Dbxref=GenBank:WP_000470573.1;Name=WP_000470573.1;gbkey=CDS;gene=pdeN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416681.1;locus_tag=AC56_RS10690;product=cyclic di-GMP phosphodiesterase;protein_id=WP_000470573.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	8578	10392	.	+	.	ID=gene-AC56_RS10685;Name=yejA;gbkey=Gene;gene=yejA;gene_biotype=protein_coding;locus_tag=AC56_RS10685;old_locus_tag=AC56_2544
NZ_JJLS01000212.1	Protein Homology	CDS	8578	10392	.	+	0	ID=cds-WP_000637047.1;Parent=gene-AC56_RS10685;Dbxref=GenBank:WP_000637047.1;Name=WP_000637047.1;gbkey=CDS;gene=yejA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416682.4;locus_tag=AC56_RS10685;product=extracellular solute-binding protein;protein_id=WP_000637047.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	10393	11487	.	+	.	ID=gene-AC56_RS10680;Name=yejB;gbkey=Gene;gene=yejB;gene_biotype=protein_coding;locus_tag=AC56_RS10680;old_locus_tag=AC56_2545
NZ_JJLS01000212.1	Protein Homology	CDS	10393	11487	.	+	0	ID=cds-WP_000501604.1;Parent=gene-AC56_RS10680;Dbxref=GenBank:WP_000501604.1;Name=WP_000501604.1;gbkey=CDS;gene=yejB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311097.1;locus_tag=AC56_RS10680;product=microcin C ABC transporter permease YejB;protein_id=WP_000501604.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	11487	12512	.	+	.	ID=gene-AC56_RS10675;Name=yejE;gbkey=Gene;gene=yejE;gene_biotype=protein_coding;locus_tag=AC56_RS10675;old_locus_tag=AC56_2546
NZ_JJLS01000212.1	Protein Homology	CDS	11487	12512	.	+	0	ID=cds-WP_000088916.1;Parent=gene-AC56_RS10675;Dbxref=GenBank:WP_000088916.1;Name=WP_000088916.1;gbkey=CDS;gene=yejE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708078.1;locus_tag=AC56_RS10675;product=ABC transporter permease;protein_id=WP_000088916.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	12514	14103	.	+	.	ID=gene-AC56_RS10670;Name=yejF;gbkey=Gene;gene=yejF;gene_biotype=protein_coding;locus_tag=AC56_RS10670;old_locus_tag=AC56_2547
NZ_JJLS01000212.1	Protein Homology	CDS	12514	14103	.	+	0	ID=cds-WP_032278587.1;Parent=gene-AC56_RS10670;Dbxref=GenBank:WP_032278587.1;Name=WP_032278587.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=yejF;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416685.1;locus_tag=AC56_RS10670;product=microcin C ABC transporter ATP-binding protein YejF;protein_id=WP_032278587.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	14107	14451	.	-	.	ID=gene-AC56_RS10665;Name=yejG;gbkey=Gene;gene=yejG;gene_biotype=protein_coding;locus_tag=AC56_RS10665;old_locus_tag=AC56_2548
NZ_JJLS01000212.1	Protein Homology	CDS	14107	14451	.	-	0	ID=cds-WP_000202798.1;Parent=gene-AC56_RS10665;Dbxref=GenBank:WP_000202798.1;Name=WP_000202798.1;gbkey=CDS;gene=yejG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416686.1;locus_tag=AC56_RS10665;product=YejG family protein;protein_id=WP_000202798.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	14784	15974	.	-	.	ID=gene-AC56_RS10660;Name=bcr;gbkey=Gene;gene=bcr;gene_biotype=protein_coding;locus_tag=AC56_RS10660;old_locus_tag=AC56_2549
NZ_JJLS01000212.1	Protein Homology	CDS	14784	15974	.	-	0	ID=cds-WP_000213382.1;Parent=gene-AC56_RS10660;Dbxref=GenBank:WP_000213382.1;Name=WP_000213382.1;gbkey=CDS;gene=bcr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311101.1;locus_tag=AC56_RS10660;product=multidrug efflux MFS transporter Bcr;protein_id=WP_000213382.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	16002	16697	.	-	.	ID=gene-AC56_RS10655;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=AC56_RS10655;old_locus_tag=AC56_2550
NZ_JJLS01000212.1	Protein Homology	CDS	16002	16697	.	-	0	ID=cds-WP_001234850.1;Parent=gene-AC56_RS10655;Dbxref=GenBank:WP_001234850.1;Name=WP_001234850.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311102.1;locus_tag=AC56_RS10655;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=WP_001234850.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	16846	18606	.	+	.	ID=gene-AC56_RS10650;Name=radD;gbkey=Gene;gene=radD;gene_biotype=protein_coding;locus_tag=AC56_RS10650;old_locus_tag=AC56_2551
NZ_JJLS01000212.1	Protein Homology	CDS	16846	18606	.	+	0	ID=cds-WP_000578062.1;Parent=gene-AC56_RS10650;Dbxref=GenBank:WP_000578062.1;Name=WP_000578062.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;gene=radD;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311103.1;locus_tag=AC56_RS10650;product=DEAD/DEAH box helicase;protein_id=WP_000578062.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	18731	19015	.	+	.	ID=gene-AC56_RS10645;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=AC56_RS10645;old_locus_tag=AC56_2552
NZ_JJLS01000212.1	Protein Homology	CDS	18731	19015	.	+	0	ID=cds-WP_000494183.1;Parent=gene-AC56_RS10645;Dbxref=GenBank:WP_000494183.1;Name=WP_000494183.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494192.1;locus_tag=AC56_RS10645;product=50S ribosomal protein L25;protein_id=WP_000494183.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	19154	20161	.	-	.	ID=gene-AC56_RS10640;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=AC56_RS10640;old_locus_tag=AC56_2553
NZ_JJLS01000212.1	Protein Homology	CDS	19154	20161	.	-	0	ID=cds-WP_000050789.1;Parent=gene-AC56_RS10640;Dbxref=GenBank:WP_000050789.1;Name=WP_000050789.1;Ontology_term=GO:0009295;gbkey=CDS;gene=yejK;go_component=nucleoid|0009295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311105.1;locus_tag=AC56_RS10640;product=nucleoid-associated protein YejK;protein_id=WP_000050789.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	20343	20570	.	+	.	ID=gene-AC56_RS10635;Name=yejL;gbkey=Gene;gene=yejL;gene_biotype=protein_coding;locus_tag=AC56_RS10635;old_locus_tag=AC56_2555
NZ_JJLS01000212.1	Protein Homology	CDS	20343	20570	.	+	0	ID=cds-WP_001135667.1;Parent=gene-AC56_RS10635;Dbxref=GenBank:WP_001135667.1;Name=WP_001135667.1;gbkey=CDS;gene=yejL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311106.1;locus_tag=AC56_RS10635;product=YejL family protein;protein_id=WP_001135667.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	20590	22350	.	+	.	ID=gene-AC56_RS10630;Name=yejM;gbkey=Gene;gene=yejM;gene_biotype=protein_coding;locus_tag=AC56_RS10630;old_locus_tag=AC56_2556
NZ_JJLS01000212.1	Protein Homology	CDS	20590	22350	.	+	0	ID=cds-WP_032206301.1;Parent=gene-AC56_RS10630;Dbxref=GenBank:WP_032206301.1;Name=WP_032206301.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yejM;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311107.1;locus_tag=AC56_RS10630;product=LPS biosynthesis-modulating metalloenzyme YejM;protein_id=WP_032206301.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	22425	22501	.	+	.	ID=gene-AC56_RS10625;Name=AC56_RS10625;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS10625;old_locus_tag=AC56_2557
NZ_JJLS01000212.1	tRNAscan-SE	tRNA	22425	22501	.	+	.	ID=rna-AC56_RS10625;Parent=gene-AC56_RS10625;anticodon=(pos:22459..22461);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS10625;product=tRNA-Pro
NZ_JJLS01000212.1	tRNAscan-SE	exon	22425	22501	.	+	.	ID=exon-AC56_RS10625-1;Parent=rna-AC56_RS10625;anticodon=(pos:22459..22461);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS10625;product=tRNA-Pro
NZ_JJLS01000212.1	RefSeq	gene	22604	25195	.	-	.	ID=gene-AC56_RS10620;Name=yejO;gbkey=Gene;gene=yejO;gene_biotype=protein_coding;locus_tag=AC56_RS10620;old_locus_tag=AC56_2558
NZ_JJLS01000212.1	Protein Homology	CDS	22604	25195	.	-	0	ID=cds-WP_016247409.1;Parent=gene-AC56_RS10620;Dbxref=GenBank:WP_016247409.1;Name=WP_016247409.1;gbkey=CDS;gene=yejO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311108.2;locus_tag=AC56_RS10620;product=autotransporter YejO;protein_id=WP_016247409.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	25515	26162	.	+	.	ID=gene-AC56_RS10615;Name=narP;gbkey=Gene;gene=narP;gene_biotype=protein_coding;locus_tag=AC56_RS10615;old_locus_tag=AC56_2559
NZ_JJLS01000212.1	Protein Homology	CDS	25515	26162	.	+	0	ID=cds-WP_001113637.1;Parent=gene-AC56_RS10615;Dbxref=GenBank:WP_001113637.1;Name=WP_001113637.1;gbkey=CDS;gene=narP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311109.1;locus_tag=AC56_RS10615;product=nitrate/nitrite response regulator protein NarP;protein_id=WP_001113637.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	26197	27249	.	-	.	ID=gene-AC56_RS10610;Name=ccmH;gbkey=Gene;gene=ccmH;gene_biotype=protein_coding;locus_tag=AC56_RS10610;old_locus_tag=AC56_2560
NZ_JJLS01000212.1	Protein Homology	CDS	26197	27249	.	-	0	ID=cds-WP_001211589.1;Parent=gene-AC56_RS10610;Dbxref=GenBank:WP_001211589.1;Name=WP_001211589.1;gbkey=CDS;gene=ccmH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416698.1;locus_tag=AC56_RS10610;product=cytochrome c-type biogenesis thiol:disulfide oxidoreductase CcmH;protein_id=WP_001211589.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	27246	27803	.	-	.	ID=gene-AC56_RS10605;Name=dsbE;gbkey=Gene;gene=dsbE;gene_biotype=protein_coding;locus_tag=AC56_RS10605;old_locus_tag=AC56_2561
NZ_JJLS01000212.1	Protein Homology	CDS	27246	27803	.	-	0	ID=cds-WP_000824439.1;Parent=gene-AC56_RS10605;Dbxref=GenBank:WP_000824439.1;Name=WP_000824439.1;gbkey=CDS;gene=dsbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311111.1;locus_tag=AC56_RS10605;product=thiol:disulfide interchange protein DsbE;protein_id=WP_000824439.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	27800	29743	.	-	.	ID=gene-AC56_RS10600;Name=ccmF;gbkey=Gene;gene=ccmF;gene_biotype=protein_coding;locus_tag=AC56_RS10600;old_locus_tag=AC56_2562
NZ_JJLS01000212.1	Protein Homology	CDS	27800	29743	.	-	0	ID=cds-WP_032278591.1;Parent=gene-AC56_RS10600;Dbxref=GenBank:WP_032278591.1;Name=WP_032278591.1;gbkey=CDS;gene=ccmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416700.1;locus_tag=AC56_RS10600;product=cytochrome c-type biogenesis heme lyase CcmF;protein_id=WP_032278591.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	29740	30219	.	-	.	ID=gene-AC56_RS10595;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=AC56_RS10595;old_locus_tag=AC56_2563
NZ_JJLS01000212.1	Protein Homology	CDS	29740	30219	.	-	0	ID=cds-WP_001026418.1;Parent=gene-AC56_RS10595;Dbxref=GenBank:WP_001026418.1;Name=WP_001026418.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311113.1;locus_tag=AC56_RS10595;product=cytochrome c maturation protein CcmE;protein_id=WP_001026418.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	30216	30425	.	-	.	ID=gene-AC56_RS10590;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=AC56_RS10590;old_locus_tag=AC56_2564
NZ_JJLS01000212.1	Protein Homology	CDS	30216	30425	.	-	0	ID=cds-WP_032278593.1;Parent=gene-AC56_RS10590;Dbxref=GenBank:WP_032278593.1;Name=WP_032278593.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461194.1;locus_tag=AC56_RS10590;product=heme exporter protein CcmD;protein_id=WP_032278593.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	30422	31159	.	-	.	ID=gene-AC56_RS10585;Name=ccmC;gbkey=Gene;gene=ccmC;gene_biotype=protein_coding;locus_tag=AC56_RS10585;old_locus_tag=AC56_2565
NZ_JJLS01000212.1	Protein Homology	CDS	30422	31159	.	-	0	ID=cds-WP_001295447.1;Parent=gene-AC56_RS10585;Dbxref=GenBank:WP_001295447.1;Name=WP_001295447.1;gbkey=CDS;gene=ccmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311115.1;locus_tag=AC56_RS10585;product=heme exporter protein CcmC;protein_id=WP_001295447.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	31201	31863	.	-	.	ID=gene-AC56_RS10580;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=AC56_RS10580;old_locus_tag=AC56_2566
NZ_JJLS01000212.1	Protein Homology	CDS	31201	31863	.	-	0	ID=cds-WP_000971730.1;Parent=gene-AC56_RS10580;Dbxref=GenBank:WP_000971730.1;Name=WP_000971730.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311116.1;locus_tag=AC56_RS10580;product=heme exporter protein CcmB;protein_id=WP_000971730.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	31860	32483	.	-	.	ID=gene-AC56_RS10575;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=AC56_RS10575;old_locus_tag=AC56_2567
NZ_JJLS01000212.1	Protein Homology	CDS	31860	32483	.	-	0	ID=cds-WP_077746209.1;Parent=gene-AC56_RS10575;Dbxref=GenBank:WP_077746209.1;Name=WP_077746209.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416705.2;locus_tag=AC56_RS10575;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=WP_077746209.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	32496	33098	.	-	.	ID=gene-AC56_RS10570;Name=napC;gbkey=Gene;gene=napC;gene_biotype=protein_coding;locus_tag=AC56_RS10570;old_locus_tag=AC56_2568
NZ_JJLS01000212.1	Protein Homology	CDS	32496	33098	.	-	0	ID=cds-WP_032278596.1;Parent=gene-AC56_RS10570;Dbxref=GenBank:WP_032278596.1;Name=WP_032278596.1;gbkey=CDS;gene=napC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311118.1;locus_tag=AC56_RS10570;product=cytochrome c-type protein NapC;protein_id=WP_032278596.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	33108	33557	.	-	.	ID=gene-AC56_RS10565;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=AC56_RS10565;old_locus_tag=AC56_2569
NZ_JJLS01000212.1	Protein Homology	CDS	33108	33557	.	-	0	ID=cds-WP_000835177.1;Parent=gene-AC56_RS10565;Dbxref=GenBank:WP_000835177.1;Name=WP_000835177.1;gbkey=CDS;gene=napB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311119.2;locus_tag=AC56_RS10565;product=nitrate reductase cytochrome c-type subunit;protein_id=WP_000835177.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	33554	34417	.	-	.	ID=gene-AC56_RS10560;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=AC56_RS10560;old_locus_tag=AC56_2570
NZ_JJLS01000212.1	Protein Homology	CDS	33554	34417	.	-	0	ID=cds-WP_000013515.1;Parent=gene-AC56_RS10560;Dbxref=GenBank:WP_000013515.1;Name=WP_000013515.1;gbkey=CDS;gene=napH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416708.1;locus_tag=AC56_RS10560;product=quinol dehydrogenase ferredoxin subunit NapH;protein_id=WP_000013515.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	34404	35099	.	-	.	ID=gene-AC56_RS10555;Name=napG;gbkey=Gene;gene=napG;gene_biotype=protein_coding;locus_tag=AC56_RS10555;old_locus_tag=AC56_2571
NZ_JJLS01000212.1	Protein Homology	CDS	34404	35099	.	-	0	ID=cds-WP_000091291.1;Parent=gene-AC56_RS10555;Dbxref=GenBank:WP_000091291.1;Name=WP_000091291.1;gbkey=CDS;gene=napG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416709.1;locus_tag=AC56_RS10555;product=ferredoxin-type protein NapG;protein_id=WP_000091291.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	35106	37592	.	-	.	ID=gene-AC56_RS10550;Name=napA;gbkey=Gene;gene=napA;gene_biotype=protein_coding;locus_tag=AC56_RS10550;old_locus_tag=AC56_2572
NZ_JJLS01000212.1	Protein Homology	CDS	35106	37592	.	-	0	ID=cds-WP_000778067.1;Parent=gene-AC56_RS10550;Dbxref=GenBank:WP_000778067.1;Name=WP_000778067.1;Ontology_term=GO:0042126,GO:0008940,GO:0030151,GO:0009325;gbkey=CDS;gene=napA;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA,molybdenum ion binding|0030151||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311122.1;locus_tag=AC56_RS10550;product=periplasmic nitrate reductase subunit alpha;protein_id=WP_000778067.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	37589	37852	.	-	.	ID=gene-AC56_RS10545;Name=napD;gbkey=Gene;gene=napD;gene_biotype=protein_coding;locus_tag=AC56_RS10545;old_locus_tag=AC56_2573
NZ_JJLS01000212.1	Protein Homology	CDS	37589	37852	.	-	0	ID=cds-WP_032278597.1;Parent=gene-AC56_RS10545;Dbxref=GenBank:WP_032278597.1;Name=WP_032278597.1;gbkey=CDS;gene=napD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311123.1;locus_tag=AC56_RS10545;product=chaperone NapD;protein_id=WP_032278597.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	37842	38336	.	-	.	ID=gene-AC56_RS10540;Name=napF;gbkey=Gene;gene=napF;gene_biotype=protein_coding;locus_tag=AC56_RS10540;old_locus_tag=AC56_2574
NZ_JJLS01000212.1	Protein Homology	CDS	37842	38336	.	-	0	ID=cds-WP_000686723.1;Parent=gene-AC56_RS10540;Dbxref=GenBank:WP_000686723.1;Name=WP_000686723.1;Ontology_term=GO:0051539;gbkey=CDS;gene=napF;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311124.1;locus_tag=AC56_RS10540;product=ferredoxin-type protein NapF;protein_id=WP_000686723.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	38445	38609	.	+	.	ID=gene-AC56_RS10535;Name=yojO;gbkey=Gene;gene=yojO;gene_biotype=protein_coding;locus_tag=AC56_RS10535;old_locus_tag=AC56_2575
NZ_JJLS01000212.1	Protein Homology	CDS	38445	38609	.	+	0	ID=cds-WP_001296837.1;Parent=gene-AC56_RS10535;Dbxref=GenBank:WP_001296837.1;Name=WP_001296837.1;gbkey=CDS;gene=yojO;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518801.1;locus_tag=AC56_RS10535;product=protein YojO;protein_id=WP_001296837.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	38723	39232	.	+	.	ID=gene-AC56_RS10530;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=AC56_RS10530;old_locus_tag=AC56_2576
NZ_JJLS01000212.1	Protein Homology	CDS	38723	39232	.	+	0	ID=cds-WP_282953772.1;Parent=gene-AC56_RS10530;Dbxref=GenBank:WP_282953772.1;Name=WP_282953772.1;Ontology_term=GO:0004867;gbkey=CDS;gene=eco;go_function=serine-type endopeptidase inhibitor activity|0004867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785302.1;locus_tag=AC56_RS10530;product=serine protease inhibitor ecotin;protein_id=WP_282953772.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	39834	41480	.	-	.	ID=gene-AC56_RS10525;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;locus_tag=AC56_RS10525;old_locus_tag=AC56_2577
NZ_JJLS01000212.1	Protein Homology	CDS	39834	41480	.	-	0	ID=cds-WP_032278598.1;Parent=gene-AC56_RS10525;Dbxref=GenBank:WP_032278598.1;Name=WP_032278598.1;Ontology_term=GO:0006099,GO:0008924;gbkey=CDS;gene=mqo;go_function=L-malate dehydrogenase (quinone) activity|0008924||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311126.1;locus_tag=AC56_RS10525;product=malate dehydrogenase (quinone);protein_id=WP_032278598.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	41698	43341	.	-	.	ID=gene-AC56_RS10520;Name=yojI;gbkey=Gene;gene=yojI;gene_biotype=protein_coding;locus_tag=AC56_RS10520;old_locus_tag=AC56_2578
NZ_JJLS01000212.1	Protein Homology	CDS	41698	43341	.	-	0	ID=cds-WP_000422182.1;Parent=gene-AC56_RS10520;Dbxref=GenBank:WP_000422182.1;Name=WP_000422182.1;gbkey=CDS;gene=yojI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416715.1;locus_tag=AC56_RS10520;product=microcin J25 efflux ABC transporter YojI;protein_id=WP_000422182.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	43417	44067	.	-	.	ID=gene-AC56_RS10515;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=protein_coding;locus_tag=AC56_RS10515;old_locus_tag=AC56_2579
NZ_JJLS01000212.1	Protein Homology	CDS	43417	44067	.	-	0	ID=cds-WP_000884957.1;Parent=gene-AC56_RS10515;Dbxref=GenBank:WP_000884957.1;Name=WP_000884957.1;gbkey=CDS;gene=alkB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311128.1;locus_tag=AC56_RS10515;product=DNA oxidative demethylase AlkB;protein_id=WP_000884957.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	44067	45131	.	-	.	ID=gene-AC56_RS10510;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=AC56_RS10510;old_locus_tag=AC56_2580
NZ_JJLS01000212.1	Protein Homology	CDS	44067	45131	.	-	0	ID=cds-WP_000710380.1;Parent=gene-AC56_RS10510;Dbxref=GenBank:WP_000710380.1;Name=WP_000710380.1;Ontology_term=GO:0006281,GO:0006355,GO:0003700;gbkey=CDS;gene=ada;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA repair|0006281||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416717.1;locus_tag=AC56_RS10510;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=WP_000710380.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	45205	46260	.	-	.	ID=gene-AC56_RS10505;Name=apbE;gbkey=Gene;gene=apbE;gene_biotype=protein_coding;locus_tag=AC56_RS10505;old_locus_tag=AC56_2581
NZ_JJLS01000212.1	Protein Homology	CDS	45205	46260	.	-	0	ID=cds-WP_032278599.1;Parent=gene-AC56_RS10505;Dbxref=GenBank:WP_032278599.1;Name=WP_032278599.1;Ontology_term=GO:0017013;gbkey=CDS;gene=apbE;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311130.1;locus_tag=AC56_RS10505;product=FAD:protein FMN transferase ApbE;protein_id=WP_032278599.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	46372	47502	.	-	.	ID=gene-AC56_RS10500;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=AC56_RS10500;old_locus_tag=AC56_2582
NZ_JJLS01000212.1	Protein Homology	CDS	46372	47502	.	-	0	ID=cds-WP_000865601.1;Parent=gene-AC56_RS10500;Dbxref=GenBank:WP_000865601.1;Name=WP_000865601.1;gbkey=CDS;gene=ompC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311131.1;locus_tag=AC56_RS10500;product=porin OmpC;protein_id=WP_000865601.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	48241	50913	.	+	.	ID=gene-AC56_RS10490;Name=rcsD;gbkey=Gene;gene=rcsD;gene_biotype=protein_coding;locus_tag=AC56_RS10490;old_locus_tag=AC56_2584
NZ_JJLS01000212.1	Protein Homology	CDS	48241	50913	.	+	0	ID=cds-WP_032278601.1;Parent=gene-AC56_RS10490;Dbxref=GenBank:WP_032278601.1;Name=WP_032278601.1;Ontology_term=GO:0000160,GO:0009927,GO:0005886;gbkey=CDS;gene=rcsD;go_component=plasma membrane|0005886||IEA;go_function=histidine phosphotransfer kinase activity|0009927||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311132.1;locus_tag=AC56_RS10490;product=phosphotransferase RcsD;protein_id=WP_032278601.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	50930	51580	.	+	.	ID=gene-AC56_RS10485;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=AC56_RS10485;old_locus_tag=AC56_2585
NZ_JJLS01000212.1	Protein Homology	CDS	50930	51580	.	+	0	ID=cds-WP_001061917.1;Parent=gene-AC56_RS10485;Dbxref=GenBank:WP_001061917.1;Name=WP_001061917.1;gbkey=CDS;gene=rcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311133.1;locus_tag=AC56_RS10485;product=response regulator transcription factor RcsB;protein_id=WP_001061917.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	51780	54629	.	-	.	ID=gene-AC56_RS10480;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=protein_coding;locus_tag=AC56_RS10480;old_locus_tag=AC56_2586
NZ_JJLS01000212.1	Protein Homology	CDS	51780	54629	.	-	0	ID=cds-WP_032265021.1;Parent=gene-AC56_RS10480;Dbxref=GenBank:WP_032265021.1;Name=WP_032265021.1;Ontology_term=GO:0000160,GO:0006355,GO:0018106,GO:0000155,GO:0005524,GO:0016020;gbkey=CDS;gene=rcsC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,peptidyl-histidine phosphorylation|0018106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416722.2;locus_tag=AC56_RS10480;product=two-component system sensor histidine kinase RcsC;protein_id=WP_032265021.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	54796	56622	.	+	.	ID=gene-AC56_RS10475;Name=atoS;gbkey=Gene;gene=atoS;gene_biotype=protein_coding;locus_tag=AC56_RS10475;old_locus_tag=AC56_2587
NZ_JJLS01000212.1	Protein Homology	CDS	54796	56622	.	+	0	ID=cds-WP_032278605.1;Parent=gene-AC56_RS10475;Dbxref=GenBank:WP_032278605.1;Name=WP_032278605.1;gbkey=CDS;gene=atoS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416723.1;locus_tag=AC56_RS10475;product=two-component system sensor histidine kinase AtoS;protein_id=WP_032278605.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	56619	58004	.	+	.	ID=gene-AC56_RS10470;Name=atoC;gbkey=Gene;gene=atoC;gene_biotype=protein_coding;locus_tag=AC56_RS10470;old_locus_tag=AC56_2588
NZ_JJLS01000212.1	Protein Homology	CDS	56619	58004	.	+	0	ID=cds-WP_000125282.1;Parent=gene-AC56_RS10470;Dbxref=GenBank:WP_000125282.1;Name=WP_000125282.1;gbkey=CDS;gene=atoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416724.1;locus_tag=AC56_RS10470;product=acetoacetate metabolism transcriptional regulator AtoC;protein_id=WP_000125282.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	58200	58862	.	+	.	ID=gene-AC56_RS10465;Name=atoD;gbkey=Gene;gene=atoD;gene_biotype=protein_coding;locus_tag=AC56_RS10465;old_locus_tag=AC56_2589
NZ_JJLS01000212.1	Protein Homology	CDS	58200	58862	.	+	0	ID=cds-WP_032278607.1;Parent=gene-AC56_RS10465;Dbxref=GenBank:WP_032278607.1;Name=WP_032278607.1;gbkey=CDS;gene=atoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416725.1;locus_tag=AC56_RS10465;product=acetate CoA-transferase subunit alpha;protein_id=WP_032278607.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	58862	59512	.	+	.	ID=gene-AC56_RS10460;Name=atoA;gbkey=Gene;gene=atoA;gene_biotype=protein_coding;locus_tag=AC56_RS10460;old_locus_tag=AC56_2590
NZ_JJLS01000212.1	Protein Homology	CDS	58862	59512	.	+	0	ID=cds-WP_000339065.1;Parent=gene-AC56_RS10460;Dbxref=GenBank:WP_000339065.1;Name=WP_000339065.1;gbkey=CDS;gene=atoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416726.1;locus_tag=AC56_RS10460;product=acetate CoA-transferase subunit beta;protein_id=WP_000339065.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	59509	60831	.	+	.	ID=gene-AC56_RS10455;Name=atoE;gbkey=Gene;gene=atoE;gene_biotype=protein_coding;locus_tag=AC56_RS10455;old_locus_tag=AC56_2591
NZ_JJLS01000212.1	Protein Homology	CDS	59509	60831	.	+	0	ID=cds-WP_032278609.1;Parent=gene-AC56_RS10455;Dbxref=GenBank:WP_032278609.1;Name=WP_032278609.1;gbkey=CDS;gene=atoE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416727.1;locus_tag=AC56_RS10455;product=TIGR00366 family protein;protein_id=WP_032278609.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	60862	62046	.	+	.	ID=gene-AC56_RS10450;Name=atoB;gbkey=Gene;gene=atoB;gene_biotype=protein_coding;locus_tag=AC56_RS10450;old_locus_tag=AC56_2592
NZ_JJLS01000212.1	Protein Homology	CDS	60862	62046	.	+	0	ID=cds-WP_032278611.1;Parent=gene-AC56_RS10450;Dbxref=GenBank:WP_032278611.1;Name=WP_032278611.1;gbkey=CDS;gene=atoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416728.1;locus_tag=AC56_RS10450;product=acetyl-CoA acetyltransferase;protein_id=WP_032278611.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	62120	62896	.	-	.	ID=gene-AC56_RS10445;Name=yfaP;gbkey=Gene;gene=yfaP;gene_biotype=protein_coding;locus_tag=AC56_RS10445;old_locus_tag=AC56_2593
NZ_JJLS01000212.1	Protein Homology	CDS	62120	62896	.	-	0	ID=cds-WP_001225852.1;Parent=gene-AC56_RS10445;Dbxref=GenBank:WP_001225852.1;Name=WP_001225852.1;gbkey=CDS;gene=yfaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416729.1;locus_tag=AC56_RS10445;product=YfaP family protein;protein_id=WP_001225852.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	62901	64550	.	-	.	ID=gene-AC56_RS10440;Name=yfaQ;gbkey=Gene;gene=yfaQ;gene_biotype=protein_coding;locus_tag=AC56_RS10440;old_locus_tag=AC56_2594
NZ_JJLS01000212.1	Protein Homology	CDS	62901	64550	.	-	0	ID=cds-WP_032278612.1;Parent=gene-AC56_RS10440;Dbxref=GenBank:WP_032278612.1;Name=WP_032278612.1;gbkey=CDS;gene=yfaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416730.1;locus_tag=AC56_RS10440;product=YfaQ family protein;protein_id=WP_032278612.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	64551	69065	.	-	.	ID=gene-AC56_RS10435;Name=AC56_RS10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS10435;old_locus_tag=AC56_2595
NZ_JJLS01000212.1	Protein Homology	CDS	64551	69065	.	-	0	ID=cds-WP_032278613.1;Parent=gene-AC56_RS10435;Dbxref=GenBank:WP_032278613.1;Name=WP_032278613.1;Ontology_term=GO:0010951,GO:0004866;gbkey=CDS;go_function=endopeptidase inhibitor activity|0004866||IEA;go_process=negative regulation of endopeptidase activity|0010951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000536590.1;locus_tag=AC56_RS10435;product=alpha-2-macroglobulin family protein;protein_id=WP_032278613.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	pseudogene	69089	69712	.	-	.	ID=gene-AC56_RS0126570;Name=yfaT;gbkey=Gene;gene=yfaT;gene_biotype=pseudogene;locus_tag=AC56_RS0126570;pseudo=true
NZ_JJLS01000212.1	Protein Homology	CDS	69089	69712	.	-	0	ID=cds-AC56_RS0126570;Parent=gene-AC56_RS0126570;Note=internal stop;gbkey=CDS;gene=yfaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311139.2;locus_tag=AC56_RS0126570;product=DUF1175 domain-containing protein;pseudo=true;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	69709	71397	.	-	.	ID=gene-AC56_RS10430;Name=yfaA;gbkey=Gene;gene=yfaA;gene_biotype=protein_coding;locus_tag=AC56_RS10430;old_locus_tag=AC56_2598
NZ_JJLS01000212.1	Protein Homology	CDS	69709	71397	.	-	0	ID=cds-WP_032278616.1;Parent=gene-AC56_RS10430;Dbxref=GenBank:WP_032278616.1;Name=WP_032278616.1;gbkey=CDS;gene=yfaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416733.4;locus_tag=AC56_RS10430;product=DUF2138 domain-containing protein;protein_id=WP_032278616.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	71546	74173	.	-	.	ID=gene-AC56_RS10425;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=AC56_RS10425;old_locus_tag=AC56_2599
NZ_JJLS01000212.1	Protein Homology	CDS	71546	74173	.	-	0	ID=cds-WP_001281242.1;Parent=gene-AC56_RS10425;Dbxref=GenBank:WP_001281242.1;Name=WP_001281242.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416734.1;locus_tag=AC56_RS10425;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WP_001281242.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	74320	75042	.	+	.	ID=gene-AC56_RS10420;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=AC56_RS10420;old_locus_tag=AC56_2600
NZ_JJLS01000212.1	Protein Homology	CDS	74320	75042	.	+	0	ID=cds-WP_000990752.1;Parent=gene-AC56_RS10420;Dbxref=GenBank:WP_000990752.1;Name=WP_000990752.1;Ontology_term=GO:0006744,GO:0061542;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinol 3-O-methyltransferase activity|0061542||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708121.1;locus_tag=AC56_RS10420;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_000990752.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	75170	78922	.	-	.	ID=gene-AC56_RS10415;Name=yfaL;gbkey=Gene;gene=yfaL;gene_biotype=protein_coding;locus_tag=AC56_RS10415;old_locus_tag=AC56_2601
NZ_JJLS01000212.1	Protein Homology	CDS	75170	78922	.	-	0	ID=cds-WP_032278617.1;Parent=gene-AC56_RS10415;Dbxref=GenBank:WP_032278617.1;Name=WP_032278617.1;Ontology_term=GO:0019867;gbkey=CDS;gene=yfaL;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416736.1;locus_tag=AC56_RS10415;product=AIDA-I family autotransporter adhesin YfaL/EhaC;protein_id=WP_032278617.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	79347	79490	.	-	.	ID=gene-AC56_RS33570;Name=ypaB;gbkey=Gene;gene=ypaB;gene_biotype=protein_coding;locus_tag=AC56_RS33570
NZ_JJLS01000212.1	Protein Homology	CDS	79347	79490	.	-	0	ID=cds-WP_001300064.1;Parent=gene-AC56_RS33570;Dbxref=GenBank:WP_001300064.1;Name=WP_001300064.1;gbkey=CDS;gene=ypaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001753443.1;locus_tag=AC56_RS33570;product=protein YpaB;protein_id=WP_001300064.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	79618	81903	.	+	.	ID=gene-AC56_RS10410;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=AC56_RS10410;old_locus_tag=AC56_2602
NZ_JJLS01000212.1	Protein Homology	CDS	79618	81903	.	+	0	ID=cds-WP_032181008.1;Parent=gene-AC56_RS10410;Dbxref=GenBank:WP_032181008.1;Name=WP_032181008.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=AC56_RS10410;product=class 1a ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_032181008.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	82049	83179	.	+	.	ID=gene-AC56_RS10405;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=AC56_RS10405;old_locus_tag=AC56_2603
NZ_JJLS01000212.1	Protein Homology	CDS	82049	83179	.	+	0	ID=cds-WP_000332037.1;Parent=gene-AC56_RS10405;Dbxref=GenBank:WP_000332037.1;Name=WP_000332037.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683700.1;locus_tag=AC56_RS10405;product=class Ia ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000332037.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	83179	83433	.	+	.	ID=gene-AC56_RS10400;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=AC56_RS10400;old_locus_tag=AC56_2604
NZ_JJLS01000212.1	Protein Homology	CDS	83179	83433	.	+	0	ID=cds-WP_000135040.1;Parent=gene-AC56_RS10400;Dbxref=GenBank:WP_000135040.1;Name=WP_000135040.1;gbkey=CDS;gene=yfaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416739.1;locus_tag=AC56_RS10400;product=ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE;protein_id=WP_000135040.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	83487	84137	.	-	.	ID=gene-AC56_RS10395;Name=inaA;gbkey=Gene;gene=inaA;gene_biotype=protein_coding;locus_tag=AC56_RS10395;old_locus_tag=AC56_2605
NZ_JJLS01000212.1	Protein Homology	CDS	83487	84137	.	-	0	ID=cds-WP_001405456.1;Parent=gene-AC56_RS10395;Dbxref=GenBank:WP_001405456.1;Name=WP_001405456.1;gbkey=CDS;gene=inaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416740.1;locus_tag=AC56_RS10395;product=lipopolysaccharide kinase InaA;protein_id=WP_001405456.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	pseudogene	84217	84321	.	-	.	ID=gene-AC56_RS33350;Name=AC56_RS33350;end_range=84321,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33350;partial=true;pseudo=true
NZ_JJLS01000212.1	Protein Homology	CDS	84217	84321	.	-	0	ID=cds-AC56_RS33350;Parent=gene-AC56_RS33350;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=84321,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311148.1;locus_tag=AC56_RS33350;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_JJLS01000212.1	RefSeq	pseudogene	84316	84558	.	+	.	ID=gene-AC56_RS10390;Name=AC56_RS10390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS10390;old_locus_tag=AC56_2606;partial=true;pseudo=true;start_range=.,84316
NZ_JJLS01000212.1	Protein Homology	CDS	84316	84558	.	+	0	ID=cds-AC56_RS10390;Parent=gene-AC56_RS10390;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311149.1;locus_tag=AC56_RS10390;partial=true;product=LysR family transcriptional regulator;pseudo=true;start_range=.,84316;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	84600	85676	.	-	.	ID=gene-AC56_RS10385;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=AC56_RS10385;old_locus_tag=AC56_2607
NZ_JJLS01000212.1	Protein Homology	CDS	84600	85676	.	-	0	ID=cds-WP_000779091.1;Parent=gene-AC56_RS10385;Dbxref=GenBank:WP_000779091.1;Name=WP_000779091.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=glpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311151.1;locus_tag=AC56_RS10385;product=glycerophosphodiester phosphodiesterase;protein_id=WP_000779091.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	85681	87039	.	-	.	ID=gene-AC56_RS10380;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=AC56_RS10380;old_locus_tag=AC56_2608
NZ_JJLS01000212.1	Protein Homology	CDS	85681	87039	.	-	0	ID=cds-WP_000948732.1;Parent=gene-AC56_RS10380;Dbxref=GenBank:WP_000948732.1;Name=WP_000948732.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416743.1;locus_tag=AC56_RS10380;product=glycerol-3-phosphate transporter;protein_id=WP_000948732.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	87312	88940	.	+	.	ID=gene-AC56_RS10375;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=AC56_RS10375;old_locus_tag=AC56_2610
NZ_JJLS01000212.1	Protein Homology	CDS	87312	88940	.	+	0	ID=cds-WP_032278618.1;Parent=gene-AC56_RS10375;Dbxref=GenBank:WP_032278618.1;Name=WP_032278618.1;Ontology_term=GO:0006072,GO:0046174,GO:0004368,GO:0010181,GO:0050660,GO:0009331;gbkey=CDS;gene=glpA;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA,polyol catabolic process|0046174||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311153.1;locus_tag=AC56_RS10375;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_032278618.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	88930	90189	.	+	.	ID=gene-AC56_RS10370;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=AC56_RS10370;old_locus_tag=AC56_2611
NZ_JJLS01000212.1	Protein Homology	CDS	88930	90189	.	+	0	ID=cds-WP_001209927.1;Parent=gene-AC56_RS10370;Dbxref=GenBank:WP_001209927.1;Name=WP_001209927.1;Ontology_term=GO:0004368;gbkey=CDS;gene=glpB;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416745.1;locus_tag=AC56_RS10370;product=glycerol-3-phosphate dehydrogenase subunit GlpB;protein_id=WP_001209927.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	90186	91376	.	+	.	ID=gene-AC56_RS10365;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=AC56_RS10365;old_locus_tag=AC56_2612
NZ_JJLS01000212.1	Protein Homology	CDS	90186	91376	.	+	0	ID=cds-WP_001000379.1;Parent=gene-AC56_RS10365;Dbxref=GenBank:WP_001000379.1;Name=WP_001000379.1;Ontology_term=GO:0006071,GO:0009061,GO:0004368,GO:0051536,GO:0009331,GO:0016020;gbkey=CDS;gene=glpC;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA,membrane|0016020||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=glycerol metabolic process|0006071||IEA,anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311155.1;locus_tag=AC56_RS10365;product=anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC;protein_id=WP_001000379.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	91569	92471	.	+	.	ID=gene-AC56_RS10360;Name=rpnE;gbkey=Gene;gene=rpnE;gene_biotype=protein_coding;locus_tag=AC56_RS10360;old_locus_tag=AC56_2614
NZ_JJLS01000212.1	Protein Homology	CDS	91569	92471	.	+	0	ID=cds-WP_032278620.1;Parent=gene-AC56_RS10360;Dbxref=GenBank:WP_032278620.1;Name=WP_032278620.1;gbkey=CDS;gene=rpnE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311156.1;locus_tag=AC56_RS10360;product=ISNCY family transposase;protein_id=WP_032278620.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	92512	93315	.	-	.	ID=gene-AC56_RS10355;Name=yfaU;gbkey=Gene;gene=yfaU;gene_biotype=protein_coding;locus_tag=AC56_RS10355;old_locus_tag=AC56_2615
NZ_JJLS01000212.1	Protein Homology	CDS	92512	93315	.	-	0	ID=cds-WP_032278622.1;Parent=gene-AC56_RS10355;Dbxref=GenBank:WP_032278622.1;Name=WP_032278622.1;gbkey=CDS;gene=yfaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416748.1;locus_tag=AC56_RS10355;product=2-keto-3-deoxy-L-rhamnonate aldolase;protein_id=WP_032278622.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	93333	94622	.	-	.	ID=gene-AC56_RS10350;Name=yfaV;gbkey=Gene;gene=yfaV;gene_biotype=protein_coding;locus_tag=AC56_RS10350;old_locus_tag=AC56_2616
NZ_JJLS01000212.1	Protein Homology	CDS	93333	94622	.	-	0	ID=cds-WP_032278623.1;Parent=gene-AC56_RS10350;Dbxref=GenBank:WP_032278623.1;Name=WP_032278623.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=yfaV;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416749.4;locus_tag=AC56_RS10350;product=MFS transporter;protein_id=WP_032278623.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	94679	95884	.	-	.	ID=gene-AC56_RS10345;Name=rhmD;gbkey=Gene;gene=rhmD;gene_biotype=protein_coding;locus_tag=AC56_RS10345;old_locus_tag=AC56_2617
NZ_JJLS01000212.1	Protein Homology	CDS	94679	95884	.	-	0	ID=cds-WP_001338959.1;Parent=gene-AC56_RS10345;Dbxref=GenBank:WP_001338959.1;Name=WP_001338959.1;Ontology_term=GO:0050032;gbkey=CDS;gene=rhmD;go_function=L-rhamnonate dehydratase activity|0050032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416750.2;locus_tag=AC56_RS10345;product=L-rhamnonate dehydratase;protein_id=WP_001338959.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	95899	96681	.	-	.	ID=gene-AC56_RS10340;Name=yfaX;gbkey=Gene;gene=yfaX;gene_biotype=protein_coding;locus_tag=AC56_RS10340;old_locus_tag=AC56_2618
NZ_JJLS01000212.1	Protein Homology	CDS	95899	96681	.	-	0	ID=cds-WP_000894185.1;Parent=gene-AC56_RS10340;Dbxref=GenBank:WP_000894185.1;Name=WP_000894185.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=yfaX;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416751.1;locus_tag=AC56_RS10340;product=IclR family transcriptional regulator;protein_id=WP_000894185.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	gene	96901	98103	.	-	.	ID=gene-AC56_RS10335;Name=yfaY;gbkey=Gene;gene=yfaY;gene_biotype=protein_coding;locus_tag=AC56_RS10335;old_locus_tag=AC56_2619
NZ_JJLS01000212.1	Protein Homology	CDS	96901	98103	.	-	0	ID=cds-WP_000921621.1;Parent=gene-AC56_RS10335;Dbxref=GenBank:WP_000921621.1;Name=WP_000921621.1;gbkey=CDS;gene=yfaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416752.1;locus_tag=AC56_RS10335;product=nicotinamide mononucleotide deamidase-related protein YfaY;protein_id=WP_000921621.1;transl_table=11
NZ_JJLS01000212.1	RefSeq	pseudogene	98203	98746	.	-	.	ID=gene-AC56_RS0126580;Name=yfaZ;gbkey=Gene;gene=yfaZ;gene_biotype=pseudogene;locus_tag=AC56_RS0126580;old_locus_tag=AC56_2621;pseudo=true
NZ_JJLS01000212.1	Protein Homology	CDS	98203	98746	.	-	0	ID=cds-AC56_RS0126580;Parent=gene-AC56_RS0126580;Note=frameshifted;gbkey=CDS;gene=yfaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311165.2;locus_tag=AC56_RS0126580;product=YfaZ family outer membrane protein;pseudo=true;transl_table=11
NZ_JJLS01000212.1	RefSeq	pseudogene	99026	99280	.	+	.	ID=gene-AC56_RS0126585;Name=nudI;end_range=99280,.;gbkey=Gene;gene=nudI;gene_biotype=pseudogene;locus_tag=AC56_RS0126585;old_locus_tag=AC56_2622;partial=true;pseudo=true
NZ_JJLS01000212.1	Protein Homology	CDS	99026	99280	.	+	0	ID=cds-AC56_RS0126585;Parent=gene-AC56_RS0126585;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016818;end_range=99280,.;gbkey=CDS;gene=nudI;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311166.1;locus_tag=AC56_RS0126585;partial=true;product=nucleoside triphosphatase NudI;pseudo=true;transl_table=11
NZ_JJLS01000212.1	RefSeq	pseudogene	99339	99674	.	+	.	ID=gene-AC56_RS0126590;Name=AC56_RS0126590;end_range=99674,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0126590;partial=true;pseudo=true
NZ_JJLS01000212.1	Protein Homology	CDS	99339	99674	.	+	0	ID=cds-AC56_RS0126590;Parent=gene-AC56_RS0126590;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=99674,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS0126590;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000213.1 1 39058
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000213.1	RefSeq	region	1	39058	.	+	.	ID=NZ_JJLS01000213.1:1..39058;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000213.1	RefSeq	pseudogene	1	543	.	+	.	ID=gene-AC56_RS10330;Name=AC56_RS10330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS10330;old_locus_tag=AC56_2624;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000213.1	Protein Homology	CDS	1	543	.	+	1	ID=cds-AC56_RS10330;Parent=gene-AC56_RS10330;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS10330;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000213.1	RefSeq	pseudogene	559	735	.	+	.	ID=gene-AC56_RS31430;Name=nudI;gbkey=Gene;gene=nudI;gene_biotype=pseudogene;locus_tag=AC56_RS31430;old_locus_tag=AC56_2625;partial=true;pseudo=true;start_range=.,559
NZ_JJLS01000213.1	Protein Homology	CDS	559	735	.	+	0	ID=cds-AC56_RS31430;Parent=gene-AC56_RS31430;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016818;gbkey=CDS;gene=nudI;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416754.1;locus_tag=AC56_RS31430;partial=true;product=nucleoside triphosphatase NudI;pseudo=true;start_range=.,559;transl_table=11
NZ_JJLS01000213.1	RefSeq	gene	774	1376	.	-	.	ID=gene-AC56_RS10325;Name=ais;gbkey=Gene;gene=ais;gene_biotype=protein_coding;locus_tag=AC56_RS10325;old_locus_tag=AC56_2626
NZ_JJLS01000213.1	Protein Homology	CDS	774	1376	.	-	0	ID=cds-WP_001295287.1;Parent=gene-AC56_RS10325;Dbxref=GenBank:WP_001295287.1;Name=WP_001295287.1;gbkey=CDS;gene=ais;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416755.1;locus_tag=AC56_RS10325;product=lipopolysaccharide core heptose(II)-phosphate phosphatase Ais;protein_id=WP_001295287.1;transl_table=11
NZ_JJLS01000213.1	RefSeq	gene	1684	2823	.	+	.	ID=gene-AC56_RS10320;Name=arnB;gbkey=Gene;gene=arnB;gene_biotype=protein_coding;locus_tag=AC56_RS10320;old_locus_tag=AC56_2627
NZ_JJLS01000213.1	Protein Homology	CDS	1684	2823	.	+	0	ID=cds-WP_001295286.1;Parent=gene-AC56_RS10320;Dbxref=GenBank:WP_001295286.1;Name=WP_001295286.1;Ontology_term=GO:0008483;gbkey=CDS;gene=arnB;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_024188371.1;locus_tag=AC56_RS10320;product=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;protein_id=WP_001295286.1;transl_table=11
NZ_JJLS01000213.1	RefSeq	gene	2827	3795	.	+	.	ID=gene-AC56_RS10315;Name=arnC;gbkey=Gene;gene=arnC;gene_biotype=protein_coding;locus_tag=AC56_RS10315;old_locus_tag=AC56_2628
NZ_JJLS01000213.1	Protein Homology	CDS	2827	3795	.	+	0	ID=cds-WP_000461657.1;Parent=gene-AC56_RS10315;Dbxref=GenBank:WP_000461657.1;Name=WP_000461657.1;Ontology_term=GO:0016780;gbkey=CDS;gene=arnC;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416757.1;locus_tag=AC56_RS10315;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WP_000461657.1;transl_table=11
NZ_JJLS01000213.1	RefSeq	gene	3795	5777	.	+	.	ID=gene-AC56_RS10310;Name=arnA;gbkey=Gene;gene=arnA;gene_biotype=protein_coding;locus_tag=AC56_RS10310;old_locus_tag=AC56_2629
NZ_JJLS01000213.1	Protein Homology	CDS	3795	5777	.	+	0	ID=cds-WP_032282771.1;Parent=gene-AC56_RS10310;Dbxref=GenBank:WP_032282771.1;Name=WP_032282771.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;gene=arnA;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416758.1;locus_tag=AC56_RS10310;product=bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA;protein_id=WP_032282771.1;transl_table=11
NZ_JJLS01000213.1	RefSeq	gene	5774	6664	.	+	.	ID=gene-AC56_RS10305;Name=arnD;gbkey=Gene;gene=arnD;gene_biotype=protein_coding;locus_tag=AC56_RS10305;old_locus_tag=AC56_2630
NZ_JJLS01000213.1	Protein Homology	CDS	5774	6664	.	+	0	ID=cds-WP_000169728.1;Parent=gene-AC56_RS10305;Dbxref=GenBank:WP_000169728.1;Name=WP_000169728.1;Ontology_term=GO:0016810;gbkey=CDS;gene=arnD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416759.1;locus_tag=AC56_RS10305;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;protein_id=WP_000169728.1;transl_table=11
NZ_JJLS01000213.1	RefSeq	gene	6664	8316	.	+	.	ID=gene-AC56_RS10300;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=AC56_RS10300;old_locus_tag=AC56_2631
NZ_JJLS01000213.1	Protein Homology	CDS	6664	8316	.	+	0	ID=cds-WP_000844057.1;Parent=gene-AC56_RS10300;Dbxref=GenBank:WP_000844057.1;Name=WP_000844057.1;Ontology_term=GO:0006493,GO:0000030,GO:0016763,GO:0016020;gbkey=CDS;gene=arnT;go_component=membrane|0016020||IEA;go_function=mannosyltransferase activity|0000030||IEA,pentosyltransferase activity|0016763||IEA;go_process=protein O-linked glycosylation|0006493||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416760.1;locus_tag=AC56_RS10300;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;protein_id=WP_000844057.1;transl_table=11
NZ_JJLS01000213.1	RefSeq	gene	8313	8648	.	+	.	ID=gene-AC56_RS10295;Name=arnE;gbkey=Gene;gene=arnE;gene_biotype=protein_coding;locus_tag=AC56_RS10295;old_locus_tag=AC56_2632
NZ_JJLS01000213.1	Protein Homology	CDS	8313	8648	.	+	0	ID=cds-WP_000638031.1;Parent=gene-AC56_RS10295;Dbxref=GenBank:WP_000638031.1;Name=WP_000638031.1;gbkey=CDS;gene=arnE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588462.1;locus_tag=AC56_RS10295;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WP_000638031.1;transl_table=11
NZ_JJLS01000213.1	RefSeq	gene	8648	9034	.	+	.	ID=gene-AC56_RS10290;Name=arnF;gbkey=Gene;gene=arnF;gene_biotype=protein_coding;locus_tag=AC56_RS10290;old_locus_tag=AC56_2633
NZ_JJLS01000213.1	Protein Homology	CDS	8648	9034	.	+	0	ID=cds-WP_000523004.1;Parent=gene-AC56_RS10290;Dbxref=GenBank:WP_000523004.1;Name=WP_000523004.1;gbkey=CDS;gene=arnF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311173.2;locus_tag=AC56_RS10290;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=WP_000523004.1;transl_table=11
NZ_JJLS01000213.1	RefSeq	gene	9028	9294	.	-	.	ID=gene-AC56_RS10285;Name=pmrD;gbkey=Gene;gene=pmrD;gene_biotype=protein_coding;locus_tag=AC56_RS10285;old_locus_tag=AC56_2634
NZ_JJLS01000213.1	Protein Homology	CDS	9028	9294	.	-	0	ID=cds-WP_001295285.1;Parent=gene-AC56_RS10285;Dbxref=GenBank:WP_001295285.1;Name=WP_001295285.1;gbkey=CDS;gene=pmrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416762.2;locus_tag=AC56_RS10285;product=signal transduction protein PmrD;protein_id=WP_001295285.1;transl_table=11
NZ_JJLS01000213.1	RefSeq	gene	9404	10759	.	-	.	ID=gene-AC56_RS10280;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=AC56_RS10280;old_locus_tag=AC56_2635
NZ_JJLS01000213.1	Protein Homology	CDS	9404	10759	.	-	0	ID=cds-WP_000577606.1;Parent=gene-AC56_RS10280;Dbxref=GenBank:WP_000577606.1;Name=WP_000577606.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416763.1;locus_tag=AC56_RS10280;product=o-succinylbenzoate--CoA ligase;protein_id=WP_000577606.1;transl_table=11
NZ_JJLS01000213.1	RefSeq	gene	10756	11718	.	-	.	ID=gene-AC56_RS10275;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=AC56_RS10275;old_locus_tag=AC56_2636
NZ_JJLS01000213.1	Protein Homology	CDS	10756	11718	.	-	0	ID=cds-WP_004017053.1;Parent=gene-AC56_RS10275;Dbxref=GenBank:WP_004017053.1;Name=WP_004017053.1;Ontology_term=GO:0009234,GO:0000287,GO:0016836;gbkey=CDS;gene=menC;go_function=magnesium ion binding|0000287||IEA,hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311176.1;locus_tag=AC56_RS10275;product=o-succinylbenzoate synthase;protein_id=WP_004017053.1;transl_table=11
NZ_JJLS01000213.1	RefSeq	gene	11718	12575	.	-	.	ID=gene-AC56_RS10270;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=AC56_RS10270;old_locus_tag=AC56_2637
NZ_JJLS01000213.1	Protein Homology	CDS	11718	12575	.	-	0	ID=cds-WP_000639996.1;Parent=gene-AC56_RS10270;Dbxref=GenBank:WP_000639996.1;Name=WP_000639996.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641973.1;locus_tag=AC56_RS10270;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_000639996.1;transl_table=11
NZ_JJLS01000213.1	RefSeq	gene	12590	13348	.	-	.	ID=gene-AC56_RS10265;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=AC56_RS10265;old_locus_tag=AC56_2638
NZ_JJLS01000213.1	Protein Homology	CDS	12590	13348	.	-	0	ID=cds-WP_004017054.1;Parent=gene-AC56_RS10265;Dbxref=GenBank:WP_004017054.1;Name=WP_004017054.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311178.1;locus_tag=AC56_RS10265;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_004017054.1;transl_table=11
NZ_JJLS01000213.1	RefSeq	gene	13345	15015	.	-	.	ID=gene-AC56_RS10260;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=AC56_RS10260;old_locus_tag=AC56_2639
NZ_JJLS01000213.1	Protein Homology	CDS	13345	15015	.	-	0	ID=cds-WP_004017056.1;Parent=gene-AC56_RS10260;Dbxref=GenBank:WP_004017056.1;Name=WP_004017056.1;Ontology_term=GO:0009234,GO:0030976,GO:0070204;gbkey=CDS;gene=menD;go_function=thiamine pyrophosphate binding|0030976||IEA,2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416767.1;locus_tag=AC56_RS10260;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_004017056.1;transl_table=11
NZ_JJLS01000213.1	RefSeq	gene	15104	16399	.	-	.	ID=gene-AC56_RS10255;Name=menF;gbkey=Gene;gene=menF;gene_biotype=protein_coding;locus_tag=AC56_RS10255;old_locus_tag=AC56_2640
NZ_JJLS01000213.1	Protein Homology	CDS	15104	16399	.	-	0	ID=cds-WP_032277930.1;Parent=gene-AC56_RS10255;Dbxref=GenBank:WP_032277930.1;Name=WP_032277930.1;Ontology_term=GO:0008909;gbkey=CDS;gene=menF;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416768.4;locus_tag=AC56_RS10255;product=isochorismate synthase MenF;protein_id=WP_032277930.1;transl_table=11
NZ_JJLS01000213.1	RefSeq	gene	16478	16783	.	-	.	ID=gene-AC56_RS10250;Name=elaB;gbkey=Gene;gene=elaB;gene_biotype=protein_coding;locus_tag=AC56_RS10250;old_locus_tag=AC56_2641
NZ_JJLS01000213.1	Protein Homology	CDS	16478	16783	.	-	0	ID=cds-WP_000070621.1;Parent=gene-AC56_RS10250;Dbxref=GenBank:WP_000070621.1;Name=WP_000070621.1;gbkey=CDS;gene=elaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311181.1;locus_tag=AC56_RS10250;product=stress response protein ElaB;protein_id=WP_000070621.1;transl_table=11
NZ_JJLS01000213.1	RefSeq	gene	16838	17299	.	-	.	ID=gene-AC56_RS10245;Name=elaA;gbkey=Gene;gene=elaA;gene_biotype=protein_coding;locus_tag=AC56_RS10245;old_locus_tag=AC56_2642
NZ_JJLS01000213.1	Protein Homology	CDS	16838	17299	.	-	0	ID=cds-WP_000574091.1;Parent=gene-AC56_RS10245;Dbxref=GenBank:WP_000574091.1;Name=WP_000574091.1;gbkey=CDS;gene=elaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416770.1;locus_tag=AC56_RS10245;product=GNAT family N-acetyltransferase;protein_id=WP_000574091.1;transl_table=11
NZ_JJLS01000213.1	RefSeq	gene	17364	18281	.	+	.	ID=gene-AC56_RS10240;Name=rbn;gbkey=Gene;gene=rbn;gene_biotype=protein_coding;locus_tag=AC56_RS10240;old_locus_tag=AC56_2643
NZ_JJLS01000213.1	Protein Homology	CDS	17364	18281	.	+	0	ID=cds-WP_001300687.1;Parent=gene-AC56_RS10240;Dbxref=GenBank:WP_001300687.1;Name=WP_001300687.1;Ontology_term=GO:0042780,GO:0016891;gbkey=CDS;gene=rbn;go_function=RNA endonuclease activity%2C producing 5'-phosphomonoesters|0016891||IEA;go_process=tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416771.4;locus_tag=AC56_RS10240;product=ribonuclease BN;protein_id=WP_001300687.1;transl_table=11
NZ_JJLS01000213.1	RefSeq	pseudogene	18469	19692	.	+	.	ID=gene-AC56_RS10235;Name=elaD;gbkey=Gene;gene=elaD;gene_biotype=pseudogene;locus_tag=AC56_RS10235;old_locus_tag=AC56_2645;pseudo=true
NZ_JJLS01000213.1	Protein Homology	CDS	18469	19692	.	+	0	ID=cds-AC56_RS10235;Parent=gene-AC56_RS10235;Note=internal stop;gbkey=CDS;gene=elaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416772.1;locus_tag=AC56_RS10235;product=deubiquitinase ElaD;pseudo=true;transl_table=11
NZ_JJLS01000213.1	RefSeq	pseudogene	20087	20728	.	+	.	ID=gene-AC56_RS31435;Name=AC56_RS31435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS31435;pseudo=true
NZ_JJLS01000213.1	Protein Homology	CDS	20087	20728	.	+	0	ID=cds-AC56_RS31435;Parent=gene-AC56_RS31435;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416774.2;locus_tag=AC56_RS31435;product=hypothetical protein;pseudo=true;transl_table=11
NZ_JJLS01000213.1	RefSeq	gene	20831	21334	.	+	.	ID=gene-AC56_RS10230;Name=yfbM;gbkey=Gene;gene=yfbM;gene_biotype=protein_coding;locus_tag=AC56_RS10230;old_locus_tag=AC56_2647
NZ_JJLS01000213.1	Protein Homology	CDS	20831	21334	.	+	0	ID=cds-WP_000525365.1;Parent=gene-AC56_RS10230;Dbxref=GenBank:WP_000525365.1;Name=WP_000525365.1;gbkey=CDS;gene=yfbM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311186.1;locus_tag=AC56_RS10230;product=YfbM family protein;protein_id=WP_000525365.1;transl_table=11
NZ_JJLS01000213.1	RefSeq	gene	21401	22858	.	-	.	ID=gene-AC56_RS10225;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=AC56_RS10225;old_locus_tag=AC56_2648
NZ_JJLS01000213.1	Protein Homology	CDS	21401	22858	.	-	0	ID=cds-WP_000156704.1;Parent=gene-AC56_RS10225;Dbxref=GenBank:WP_000156704.1;Name=WP_000156704.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416779.2;locus_tag=AC56_RS10225;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_000156704.1;transl_table=11
NZ_JJLS01000213.1	RefSeq	gene	22865	24394	.	-	.	ID=gene-AC56_RS10220;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=AC56_RS10220;old_locus_tag=AC56_2649
NZ_JJLS01000213.1	Protein Homology	CDS	22865	24394	.	-	0	ID=cds-WP_000926441.1;Parent=gene-AC56_RS10220;Dbxref=GenBank:WP_000926441.1;Name=WP_000926441.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=AC56_RS10220;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_000926441.1;transl_table=11
NZ_JJLS01000213.1	RefSeq	gene	24558	26399	.	-	.	ID=gene-AC56_RS10215;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=AC56_RS10215;old_locus_tag=AC56_2650
NZ_JJLS01000213.1	Protein Homology	CDS	24558	26399	.	-	0	ID=cds-WP_001056644.1;Parent=gene-AC56_RS10215;Dbxref=GenBank:WP_001056644.1;Name=WP_001056644.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129466.1;locus_tag=AC56_RS10215;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_001056644.1;transl_table=11
NZ_JJLS01000213.1	RefSeq	gene	26396	26698	.	-	.	ID=gene-AC56_RS10210;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=AC56_RS10210;old_locus_tag=AC56_2651
NZ_JJLS01000213.1	Protein Homology	CDS	26396	26698	.	-	0	ID=cds-WP_000612644.1;Parent=gene-AC56_RS10210;Dbxref=GenBank:WP_000612644.1;Name=WP_000612644.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1;locus_tag=AC56_RS10210;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_000612644.1;transl_table=11
NZ_JJLS01000213.1	RefSeq	gene	26695	27249	.	-	.	ID=gene-AC56_RS10205;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=AC56_RS10205;old_locus_tag=AC56_2652
NZ_JJLS01000213.1	Protein Homology	CDS	26695	27249	.	-	0	ID=cds-WP_032277932.1;Parent=gene-AC56_RS10205;Dbxref=GenBank:WP_032277932.1;Name=WP_032277932.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311191.1;locus_tag=AC56_RS10205;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_032277932.1;transl_table=11
NZ_JJLS01000213.1	RefSeq	gene	27261	27803	.	-	.	ID=gene-AC56_RS10200;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=AC56_RS10200;old_locus_tag=AC56_2653
NZ_JJLS01000213.1	Protein Homology	CDS	27261	27803	.	-	0	ID=cds-WP_000172749.1;Parent=gene-AC56_RS10200;Dbxref=GenBank:WP_000172749.1;Name=WP_000172749.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoI;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1;locus_tag=AC56_RS10200;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_000172749.1;transl_table=11
NZ_JJLS01000213.1	RefSeq	gene	27818	28795	.	-	.	ID=gene-AC56_RS10195;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=AC56_RS10195;old_locus_tag=AC56_2654
NZ_JJLS01000213.1	Protein Homology	CDS	27818	28795	.	-	0	ID=cds-WP_000118507.1;Parent=gene-AC56_RS10195;Dbxref=GenBank:WP_000118507.1;Name=WP_000118507.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=AC56_RS10195;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_000118507.1;transl_table=11
NZ_JJLS01000213.1	RefSeq	gene	28792	31518	.	-	.	ID=gene-AC56_RS10190;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=AC56_RS10190;old_locus_tag=AC56_2655
NZ_JJLS01000213.1	Protein Homology	CDS	28792	31518	.	-	0	ID=cds-WP_032277933.1;Parent=gene-AC56_RS10190;Dbxref=GenBank:WP_032277933.1;Name=WP_032277933.1;Ontology_term=GO:0006120,GO:0050136,GO:0051536;gbkey=CDS;gene=nuoG;go_function=NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416786.4;locus_tag=AC56_RS10190;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_032277933.1;transl_table=11
NZ_JJLS01000213.1	RefSeq	gene	31571	32908	.	-	.	ID=gene-AC56_RS10185;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=AC56_RS10185;old_locus_tag=AC56_2656
NZ_JJLS01000213.1	Protein Homology	CDS	31571	32908	.	-	0	ID=cds-WP_000789502.1;Parent=gene-AC56_RS10185;Dbxref=GenBank:WP_000789502.1;Name=WP_000789502.1;Ontology_term=GO:0008137,GO:0051539;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311195.1;locus_tag=AC56_RS10185;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_000789502.1;transl_table=11
NZ_JJLS01000213.1	RefSeq	gene	32905	33405	.	-	.	ID=gene-AC56_RS10180;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=AC56_RS10180;old_locus_tag=AC56_2657
NZ_JJLS01000213.1	Protein Homology	CDS	32905	33405	.	-	0	ID=cds-WP_000545042.1;Parent=gene-AC56_RS10180;Dbxref=GenBank:WP_000545042.1;Name=WP_000545042.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416788.1;locus_tag=AC56_RS10180;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_000545042.1;transl_table=11
NZ_JJLS01000213.1	RefSeq	gene	33408	35210	.	-	.	ID=gene-AC56_RS10175;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=AC56_RS10175;old_locus_tag=AC56_2658
NZ_JJLS01000213.1	Protein Homology	CDS	33408	35210	.	-	0	ID=cds-WP_000247878.1;Parent=gene-AC56_RS10175;Dbxref=GenBank:WP_000247878.1;Name=WP_000247878.1;Ontology_term=GO:0048038,GO:0050136,GO:0051287,GO:0030964;gbkey=CDS;gene=nuoC;go_component=NADH dehydrogenase complex|0030964||IEA;go_function=quinone binding|0048038||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708168.1;locus_tag=AC56_RS10175;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WP_000247878.1;transl_table=11
NZ_JJLS01000213.1	RefSeq	gene	35304	35966	.	-	.	ID=gene-AC56_RS10170;Name=nuoB;gbkey=Gene;gene=nuoB;gene_biotype=protein_coding;locus_tag=AC56_RS10170;old_locus_tag=AC56_2659
NZ_JJLS01000213.1	Protein Homology	CDS	35304	35966	.	-	0	ID=cds-WP_000386733.1;Parent=gene-AC56_RS10170;Dbxref=GenBank:WP_000386733.1;Name=WP_000386733.1;gbkey=CDS;gene=nuoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311198.1;locus_tag=AC56_RS10170;product=NADH-quinone oxidoreductase subunit NuoB;protein_id=WP_000386733.1;transl_table=11
NZ_JJLS01000213.1	RefSeq	gene	35982	36425	.	-	.	ID=gene-AC56_RS10165;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=AC56_RS10165;old_locus_tag=AC56_2660
NZ_JJLS01000213.1	Protein Homology	CDS	35982	36425	.	-	0	ID=cds-WP_000062997.1;Parent=gene-AC56_RS10165;Dbxref=GenBank:WP_000062997.1;Name=WP_000062997.1;gbkey=CDS;gene=nuoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708170.1;locus_tag=AC56_RS10165;product=NADH-quinone oxidoreductase subunit NuoA;protein_id=WP_000062997.1;transl_table=11
NZ_JJLS01000213.1	RefSeq	gene	37056	37994	.	-	.	ID=gene-AC56_RS10160;Name=lrhA;gbkey=Gene;gene=lrhA;gene_biotype=protein_coding;locus_tag=AC56_RS10160;old_locus_tag=AC56_2663
NZ_JJLS01000213.1	Protein Homology	CDS	37056	37994	.	-	0	ID=cds-WP_000622290.1;Parent=gene-AC56_RS10160;Dbxref=GenBank:WP_000622290.1;Name=WP_000622290.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lrhA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311200.1;locus_tag=AC56_RS10160;product=transcriptional regulator LrhA;protein_id=WP_000622290.1;transl_table=11
NZ_JJLS01000213.1	RefSeq	pseudogene	38649	39058	.	+	.	ID=gene-AC56_RS27800;Name=AC56_RS27800;end_range=39058,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS27800;partial=true;pseudo=true
NZ_JJLS01000213.1	Protein Homology	CDS	38649	39058	.	+	0	ID=cds-AC56_RS27800;Parent=gene-AC56_RS27800;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=39058,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS27800;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000214.1 1 2483
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000214.1	RefSeq	region	1	2483	.	+	.	ID=NZ_JJLS01000214.1:1..2483;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000214.1	RefSeq	pseudogene	1	580	.	-	.	ID=gene-AC56_RS10155;Name=AC56_RS10155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS10155;old_locus_tag=AC56_2665;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000214.1	Protein Homology	CDS	1	580	.	-	0	ID=cds-AC56_RS10155;Parent=gene-AC56_RS10155;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=AC56_RS10155;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000214.1	RefSeq	pseudogene	636	1304	.	+	.	ID=gene-AC56_RS0126610;Name=AC56_RS0126610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0126610;old_locus_tag=AC56_2666;partial=true;pseudo=true;start_range=.,636
NZ_JJLS01000214.1	Protein Homology	CDS	636	1304	.	+	0	ID=cds-AC56_RS0126610;Parent=gene-AC56_RS0126610;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415135.1;locus_tag=AC56_RS0126610;partial=true;product=DUF3440 domain-containing protein;pseudo=true;start_range=.,636;transl_table=11
NZ_JJLS01000214.1	RefSeq	pseudogene	1277	1905	.	+	.	ID=gene-AC56_RS0126615;Name=AC56_RS0126615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0126615;pseudo=true
NZ_JJLS01000214.1	Protein Homology	CDS	1277	1905	.	+	0	ID=cds-AC56_RS0126615;Parent=gene-AC56_RS0126615;Note=frameshifted;Ontology_term=GO:0071453,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cellular response to oxygen levels|0071453||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415134.1;locus_tag=AC56_RS0126615;product=IbrB-like domain-containing protein;pseudo=true;transl_table=11
NZ_JJLS01000214.1	RefSeq	pseudogene	1906	2483	.	-	.	ID=gene-AC56_RS10150;Name=ybdL;end_range=2483,.;gbkey=Gene;gene=ybdL;gene_biotype=pseudogene;locus_tag=AC56_RS10150;old_locus_tag=AC56_2669;partial=true;pseudo=true
NZ_JJLS01000214.1	Protein Homology	CDS	1906	2483	.	-	2	ID=cds-AC56_RS10150;Parent=gene-AC56_RS10150;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2483,.;gbkey=CDS;gene=ybdL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415133.1;locus_tag=AC56_RS10150;partial=true;product=methionine-oxo-acid transaminase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000215.1 1 57690
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000215.1	RefSeq	region	1	57690	.	+	.	ID=NZ_JJLS01000215.1:1..57690;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000215.1	RefSeq	gene	1	447	.	+	.	ID=gene-AC56_RS10145;Name=AC56_RS10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS10145;old_locus_tag=AC56_2670;partial=true;start_range=.,1
NZ_JJLS01000215.1	Protein Homology	CDS	1	447	.	+	0	ID=cds-WP_032282779.1;Parent=gene-AC56_RS10145;Dbxref=GenBank:WP_032282779.1;Name=WP_032282779.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS10145;partial=true;product=IS1 family transposase;protein_id=WP_032282779.1;start_range=.,1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	792	2009	.	+	.	ID=gene-AC56_RS10140;Name=alaA;gbkey=Gene;gene=alaA;gene_biotype=protein_coding;locus_tag=AC56_RS10140;old_locus_tag=AC56_2671
NZ_JJLS01000215.1	Protein Homology	CDS	792	2009	.	+	0	ID=cds-WP_000074527.1;Parent=gene-AC56_RS10140;Dbxref=GenBank:WP_000074527.1;Name=WP_000074527.1;gbkey=CDS;gene=alaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416793.1;locus_tag=AC56_RS10140;product=alanine transaminase AlaA;protein_id=WP_000074527.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	2093	2692	.	+	.	ID=gene-AC56_RS10135;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;locus_tag=AC56_RS10135;old_locus_tag=AC56_2672
NZ_JJLS01000215.1	Protein Homology	CDS	2093	2692	.	+	0	ID=cds-WP_032278631.1;Parent=gene-AC56_RS10135;Dbxref=GenBank:WP_032278631.1;Name=WP_032278631.1;Ontology_term=GO:0002953;gbkey=CDS;gene=yfbR;go_function=5'-deoxynucleotidase activity|0002953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311202.1;locus_tag=AC56_RS10135;product=5'-deoxynucleotidase;protein_id=WP_032278631.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	2751	4583	.	-	.	ID=gene-AC56_RS10130;Name=yfbS;gbkey=Gene;gene=yfbS;gene_biotype=protein_coding;locus_tag=AC56_RS10130;old_locus_tag=AC56_2673
NZ_JJLS01000215.1	Protein Homology	CDS	2751	4583	.	-	0	ID=cds-WP_001012899.1;Parent=gene-AC56_RS10130;Dbxref=GenBank:WP_001012899.1;Name=WP_001012899.1;Ontology_term=GO:0008324;gbkey=CDS;gene=yfbS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311203.1;locus_tag=AC56_RS10130;product=SLC13 family permease;protein_id=WP_001012899.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	4670	5320	.	-	.	ID=gene-AC56_RS10125;Name=hxpA;gbkey=Gene;gene=hxpA;gene_biotype=protein_coding;locus_tag=AC56_RS10125;old_locus_tag=AC56_2674
NZ_JJLS01000215.1	Protein Homology	CDS	4670	5320	.	-	0	ID=cds-WP_001203392.1;Parent=gene-AC56_RS10125;Dbxref=GenBank:WP_001203392.1;Name=WP_001203392.1;gbkey=CDS;gene=hxpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416796.2;locus_tag=AC56_RS10125;product=hexitol phosphatase HxpA;protein_id=WP_001203392.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	5331	5825	.	-	.	ID=gene-AC56_RS10120;Name=yfbU;gbkey=Gene;gene=yfbU;gene_biotype=protein_coding;locus_tag=AC56_RS10120;old_locus_tag=AC56_2675
NZ_JJLS01000215.1	Protein Homology	CDS	5331	5825	.	-	0	ID=cds-WP_000426124.1;Parent=gene-AC56_RS10120;Dbxref=GenBank:WP_000426124.1;Name=WP_000426124.1;gbkey=CDS;gene=yfbU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371080.1;locus_tag=AC56_RS10120;product=YfbU family protein;protein_id=WP_000426124.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	5908	6363	.	-	.	ID=gene-AC56_RS10115;Name=yfbV;gbkey=Gene;gene=yfbV;gene_biotype=protein_coding;locus_tag=AC56_RS10115;old_locus_tag=AC56_2676
NZ_JJLS01000215.1	Protein Homology	CDS	5908	6363	.	-	0	ID=cds-WP_000106627.1;Parent=gene-AC56_RS10115;Dbxref=GenBank:WP_000106627.1;Name=WP_000106627.1;gbkey=CDS;gene=yfbV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129545.1;locus_tag=AC56_RS10115;product=terminus macrodomain insulation protein YfbV;protein_id=WP_000106627.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	6701	7903	.	+	.	ID=gene-AC56_RS10105;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=AC56_RS10105;old_locus_tag=AC56_2678
NZ_JJLS01000215.1	Protein Homology	CDS	6701	7903	.	+	0	ID=cds-WP_000095707.1;Parent=gene-AC56_RS10105;Dbxref=GenBank:WP_000095707.1;Name=WP_000095707.1;gbkey=CDS;gene=ackA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1;locus_tag=AC56_RS10105;product=acetate kinase;protein_id=WP_000095707.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	7978	10122	.	+	.	ID=gene-AC56_RS10100;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=AC56_RS10100;old_locus_tag=AC56_2679
NZ_JJLS01000215.1	Protein Homology	CDS	7978	10122	.	+	0	ID=cds-WP_000086722.1;Parent=gene-AC56_RS10100;Dbxref=GenBank:WP_000086722.1;Name=WP_000086722.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416800.1;locus_tag=AC56_RS10100;product=phosphate acetyltransferase;protein_id=WP_000086722.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	10312	11832	.	+	.	ID=gene-AC56_RS10095;Name=yfcC;gbkey=Gene;gene=yfcC;gene_biotype=protein_coding;locus_tag=AC56_RS10095;old_locus_tag=AC56_2680
NZ_JJLS01000215.1	Protein Homology	CDS	10312	11832	.	+	0	ID=cds-WP_001274501.1;Parent=gene-AC56_RS10095;Dbxref=GenBank:WP_001274501.1;Name=WP_001274501.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yfcC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416801.2;locus_tag=AC56_RS10095;product=putative basic amino acid antiporter YfcC;protein_id=WP_001274501.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	11865	12407	.	-	.	ID=gene-AC56_RS10090;Name=yfcD;gbkey=Gene;gene=yfcD;gene_biotype=protein_coding;locus_tag=AC56_RS10090;old_locus_tag=AC56_2681
NZ_JJLS01000215.1	Protein Homology	CDS	11865	12407	.	-	0	ID=cds-WP_000437935.1;Parent=gene-AC56_RS10090;Dbxref=GenBank:WP_000437935.1;Name=WP_000437935.1;Ontology_term=GO:0016817;gbkey=CDS;gene=yfcD;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311210.1;locus_tag=AC56_RS10090;product=NUDIX hydrolase YfcD;protein_id=WP_000437935.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	12465	13016	.	-	.	ID=gene-AC56_RS10085;Name=yfcE;gbkey=Gene;gene=yfcE;gene_biotype=protein_coding;locus_tag=AC56_RS10085;old_locus_tag=AC56_2682
NZ_JJLS01000215.1	Protein Homology	CDS	12465	13016	.	-	0	ID=cds-WP_000772452.1;Parent=gene-AC56_RS10085;Dbxref=GenBank:WP_000772452.1;Name=WP_000772452.1;gbkey=CDS;gene=yfcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311211.4;locus_tag=AC56_RS10085;product=phosphodiesterase;protein_id=WP_000772452.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	13072	13716	.	-	.	ID=gene-AC56_RS10080;Name=yfcF;gbkey=Gene;gene=yfcF;gene_biotype=protein_coding;locus_tag=AC56_RS10080;old_locus_tag=AC56_2683
NZ_JJLS01000215.1	Protein Homology	CDS	13072	13716	.	-	0	ID=cds-WP_000042451.1;Parent=gene-AC56_RS10080;Dbxref=GenBank:WP_000042451.1;Name=WP_000042451.1;Ontology_term=GO:0006749;gbkey=CDS;gene=yfcF;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416804.1;locus_tag=AC56_RS10080;product=glutathione transferase;protein_id=WP_000042451.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	13852	14499	.	+	.	ID=gene-AC56_RS10075;Name=yfcG;gbkey=Gene;gene=yfcG;gene_biotype=protein_coding;locus_tag=AC56_RS10075;old_locus_tag=AC56_2684
NZ_JJLS01000215.1	Protein Homology	CDS	13852	14499	.	+	0	ID=cds-WP_000566509.1;Parent=gene-AC56_RS10075;Dbxref=GenBank:WP_000566509.1;Name=WP_000566509.1;gbkey=CDS;gene=yfcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416805.1;locus_tag=AC56_RS10075;product=GSH-dependent disulfide bond oxidoreductase;protein_id=WP_000566509.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	14556	14918	.	+	.	ID=gene-AC56_RS10070;Name=folX;gbkey=Gene;gene=folX;gene_biotype=protein_coding;locus_tag=AC56_RS10070;old_locus_tag=AC56_2685
NZ_JJLS01000215.1	Protein Homology	CDS	14556	14918	.	+	0	ID=cds-WP_000068457.1;Parent=gene-AC56_RS10070;Dbxref=GenBank:WP_000068457.1;Name=WP_000068457.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folX;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311214.1;locus_tag=AC56_RS10070;product=dihydroneopterin triphosphate 2'-epimerase;protein_id=WP_000068457.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	14939	15832	.	+	.	ID=gene-AC56_RS10065;Name=yfcH;gbkey=Gene;gene=yfcH;gene_biotype=protein_coding;locus_tag=AC56_RS10065;old_locus_tag=AC56_2686
NZ_JJLS01000215.1	Protein Homology	CDS	14939	15832	.	+	0	ID=cds-WP_001028339.1;Parent=gene-AC56_RS10065;Dbxref=GenBank:WP_001028339.1;Name=WP_001028339.1;Ontology_term=GO:0003824;gbkey=CDS;gene=yfcH;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416807.1;locus_tag=AC56_RS10065;product=TIGR01777 family oxidoreductase;protein_id=WP_001028339.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	pseudogene	15880	16770	.	-	.	ID=gene-AC56_RS0126620;Name=rpnB;gbkey=Gene;gene=rpnB;gene_biotype=pseudogene;locus_tag=AC56_RS0126620;old_locus_tag=AC56_2687;pseudo=true
NZ_JJLS01000215.1	Protein Homology	CDS	15880	16770	.	-	0	ID=cds-AC56_RS0126620;Parent=gene-AC56_RS0126620;Note=internal stop;gbkey=CDS;gene=rpnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311216.1;locus_tag=AC56_RS0126620;product=recombination-promoting nuclease RpnB;pseudo=true;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	16967	17740	.	-	.	ID=gene-AC56_RS10060;Name=hisP;gbkey=Gene;gene=hisP;gene_biotype=protein_coding;locus_tag=AC56_RS10060;old_locus_tag=AC56_2688
NZ_JJLS01000215.1	Protein Homology	CDS	16967	17740	.	-	0	ID=cds-WP_001293624.1;Parent=gene-AC56_RS10060;Dbxref=GenBank:WP_001293624.1;Name=WP_001293624.1;gbkey=CDS;gene=hisP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311217.1;locus_tag=AC56_RS10060;product=histidine ABC transporter ATP-binding protein HisP;protein_id=WP_001293624.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	17748	18464	.	-	.	ID=gene-AC56_RS10055;Name=hisM;gbkey=Gene;gene=hisM;gene_biotype=protein_coding;locus_tag=AC56_RS10055;old_locus_tag=AC56_2689
NZ_JJLS01000215.1	Protein Homology	CDS	17748	18464	.	-	0	ID=cds-WP_000569958.1;Parent=gene-AC56_RS10055;Dbxref=GenBank:WP_000569958.1;Name=WP_000569958.1;Ontology_term=GO:0022857,GO:0055052;gbkey=CDS;gene=hisM;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311218.1;locus_tag=AC56_RS10055;product=ABC transporter permease;protein_id=WP_000569958.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	18461	19147	.	-	.	ID=gene-AC56_RS10050;Name=hisQ;gbkey=Gene;gene=hisQ;gene_biotype=protein_coding;locus_tag=AC56_RS10050;old_locus_tag=AC56_2690
NZ_JJLS01000215.1	Protein Homology	CDS	18461	19147	.	-	0	ID=cds-WP_000965518.1;Parent=gene-AC56_RS10050;Dbxref=GenBank:WP_000965518.1;Name=WP_000965518.1;gbkey=CDS;gene=hisQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124147.1;locus_tag=AC56_RS10050;product=histidine ABC transporter permease HisQ;protein_id=WP_000965518.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	19237	20019	.	-	.	ID=gene-AC56_RS10045;Name=hisJ;gbkey=Gene;gene=hisJ;gene_biotype=protein_coding;locus_tag=AC56_RS10045;old_locus_tag=AC56_2691
NZ_JJLS01000215.1	Protein Homology	CDS	19237	20019	.	-	0	ID=cds-WP_000737621.1;Parent=gene-AC56_RS10045;Dbxref=GenBank:WP_000737621.1;Name=WP_000737621.1;gbkey=CDS;gene=hisJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311220.1;locus_tag=AC56_RS10045;product=histidine ABC transporter substrate-binding protein HisJ;protein_id=WP_000737621.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	20240	21022	.	-	.	ID=gene-AC56_RS10040;Name=argT;gbkey=Gene;gene=argT;gene_biotype=protein_coding;locus_tag=AC56_RS10040;old_locus_tag=AC56_2692
NZ_JJLS01000215.1	Protein Homology	CDS	20240	21022	.	-	0	ID=cds-WP_000748271.1;Parent=gene-AC56_RS10040;Dbxref=GenBank:WP_000748271.1;Name=WP_000748271.1;gbkey=CDS;gene=argT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416813.1;locus_tag=AC56_RS10040;product=lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT;protein_id=WP_000748271.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	21288	21857	.	-	.	ID=gene-AC56_RS10035;Name=ubiX;gbkey=Gene;gene=ubiX;gene_biotype=protein_coding;locus_tag=AC56_RS10035;old_locus_tag=AC56_2693
NZ_JJLS01000215.1	Protein Homology	CDS	21288	21857	.	-	0	ID=cds-WP_000825700.1;Parent=gene-AC56_RS10035;Dbxref=GenBank:WP_000825700.1;Name=WP_000825700.1;gbkey=CDS;gene=ubiX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120208.1;locus_tag=AC56_RS10035;product=flavin prenyltransferase UbiX;protein_id=WP_000825700.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	21952	23469	.	-	.	ID=gene-AC56_RS10030;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=AC56_RS10030;old_locus_tag=AC56_2694
NZ_JJLS01000215.1	Protein Homology	CDS	21952	23469	.	-	0	ID=cds-WP_000334221.1;Parent=gene-AC56_RS10030;Dbxref=GenBank:WP_000334221.1;Name=WP_000334221.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=AC56_RS10030;product=amidophosphoribosyltransferase;protein_id=WP_000334221.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	23506	23994	.	-	.	ID=gene-AC56_RS10025;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=AC56_RS10025;old_locus_tag=AC56_2695
NZ_JJLS01000215.1	Protein Homology	CDS	23506	23994	.	-	0	ID=cds-WP_000262113.1;Parent=gene-AC56_RS10025;Dbxref=GenBank:WP_000262113.1;Name=WP_000262113.1;gbkey=CDS;gene=cvpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311224.1;locus_tag=AC56_RS10025;product=colicin V production protein;protein_id=WP_000262113.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	24253	24915	.	-	.	ID=gene-AC56_RS10020;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=protein_coding;locus_tag=AC56_RS10020;old_locus_tag=AC56_2696
NZ_JJLS01000215.1	Protein Homology	CDS	24253	24915	.	-	0	ID=cds-WP_000146992.1;Parent=gene-AC56_RS10020;Dbxref=GenBank:WP_000146992.1;Name=WP_000146992.1;Ontology_term=GO:0032506,GO:0042834,GO:0030428;gbkey=CDS;gene=dedD;go_component=cell septum|0030428||IEA;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416817.2;locus_tag=AC56_RS10020;product=cell division protein DedD;protein_id=WP_000146992.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	24905	26173	.	-	.	ID=gene-AC56_RS10015;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=AC56_RS10015;old_locus_tag=AC56_2697
NZ_JJLS01000215.1	Protein Homology	CDS	24905	26173	.	-	0	ID=cds-WP_000584546.1;Parent=gene-AC56_RS10015;Dbxref=GenBank:WP_000584546.1;Name=WP_000584546.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416818.1;locus_tag=AC56_RS10015;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_000584546.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	26243	27157	.	-	.	ID=gene-AC56_RS10010;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=AC56_RS10010;old_locus_tag=AC56_2698
NZ_JJLS01000215.1	Protein Homology	CDS	26243	27157	.	-	0	ID=cds-WP_000118404.1;Parent=gene-AC56_RS10010;Dbxref=GenBank:WP_000118404.1;Name=WP_000118404.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311227.1;locus_tag=AC56_RS10010;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_000118404.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	27313	27972	.	-	.	ID=gene-AC56_RS10005;Name=dedA;gbkey=Gene;gene=dedA;gene_biotype=protein_coding;locus_tag=AC56_RS10005;old_locus_tag=AC56_2699
NZ_JJLS01000215.1	Protein Homology	CDS	27313	27972	.	-	0	ID=cds-WP_000364335.1;Parent=gene-AC56_RS10005;Dbxref=GenBank:WP_000364335.1;Name=WP_000364335.1;gbkey=CDS;gene=dedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311228.1;locus_tag=AC56_RS10005;product=DedA family protein;protein_id=WP_000364335.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	28055	28867	.	-	.	ID=gene-AC56_RS10000;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=AC56_RS10000;old_locus_tag=AC56_2700
NZ_JJLS01000215.1	Protein Homology	CDS	28055	28867	.	-	0	ID=cds-WP_001283585.1;Parent=gene-AC56_RS10000;Dbxref=GenBank:WP_001283585.1;Name=WP_001283585.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311229.1;locus_tag=AC56_RS10000;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_001283585.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	28867	29880	.	-	.	ID=gene-AC56_RS09995;Name=usg;gbkey=Gene;gene=usg;gene_biotype=protein_coding;locus_tag=AC56_RS09995;old_locus_tag=AC56_2701
NZ_JJLS01000215.1	Protein Homology	CDS	28867	29880	.	-	0	ID=cds-WP_001289167.1;Parent=gene-AC56_RS09995;Dbxref=GenBank:WP_001289167.1;Name=WP_001289167.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983,GO:0051287;gbkey=CDS;gene=usg;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416822.1;locus_tag=AC56_RS09995;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_001289167.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	29946	31082	.	-	.	ID=gene-AC56_RS09990;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=AC56_RS09990;old_locus_tag=AC56_2702
NZ_JJLS01000215.1	Protein Homology	CDS	29946	31082	.	-	0	ID=cds-WP_032278632.1;Parent=gene-AC56_RS09990;Dbxref=GenBank:WP_032278632.1;Name=WP_032278632.1;Ontology_term=GO:0008615,GO:0033711,GO:0046983,GO:0051287;gbkey=CDS;gene=pdxB;go_function=4-phosphoerythronate dehydrogenase activity|0033711||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708202.1;locus_tag=AC56_RS09990;product=4-phosphoerythronate dehydrogenase PdxB;protein_id=WP_032278632.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	31181	32176	.	+	.	ID=gene-AC56_RS09985;Name=flk;gbkey=Gene;gene=flk;gene_biotype=protein_coding;locus_tag=AC56_RS09985;old_locus_tag=AC56_2703
NZ_JJLS01000215.1	Protein Homology	CDS	31181	32176	.	+	0	ID=cds-WP_000615821.1;Parent=gene-AC56_RS09985;Dbxref=GenBank:WP_000615821.1;Name=WP_000615821.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;gene=flk;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416824.1;locus_tag=AC56_RS09985;product=flagella biosynthesis regulator Flk;protein_id=WP_000615821.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	32173	33351	.	-	.	ID=gene-AC56_RS09980;Name=yfcJ;gbkey=Gene;gene=yfcJ;gene_biotype=protein_coding;locus_tag=AC56_RS09980;old_locus_tag=AC56_2704
NZ_JJLS01000215.1	Protein Homology	CDS	32173	33351	.	-	0	ID=cds-WP_000127781.1;Parent=gene-AC56_RS09980;Dbxref=GenBank:WP_000127781.1;Name=WP_000127781.1;gbkey=CDS;gene=yfcJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416825.1;locus_tag=AC56_RS09980;product=MFS transporter;protein_id=WP_000127781.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	33616	34836	.	-	.	ID=gene-AC56_RS09975;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=AC56_RS09975;old_locus_tag=AC56_2705
NZ_JJLS01000215.1	Protein Homology	CDS	33616	34836	.	-	0	ID=cds-WP_000817178.1;Parent=gene-AC56_RS09975;Dbxref=GenBank:WP_000817178.1;Name=WP_000817178.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416826.1;locus_tag=AC56_RS09975;product=beta-ketoacyl-ACP synthase I;protein_id=WP_000817178.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	34995	37001	.	+	.	ID=gene-AC56_RS09970;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=AC56_RS09970;old_locus_tag=AC56_2706
NZ_JJLS01000215.1	Protein Homology	CDS	34995	37001	.	+	0	ID=cds-WP_000683822.1;Parent=gene-AC56_RS09970;Dbxref=GenBank:WP_000683822.1;Name=WP_000683822.1;Ontology_term=GO:0008033,GO:0004808,GO:0016491;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,oxidoreductase activity|0016491||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416827.4;locus_tag=AC56_RS09970;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=WP_000683822.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	37122	37400	.	-	.	ID=gene-AC56_RS09965;Name=yfcL;gbkey=Gene;gene=yfcL;gene_biotype=protein_coding;locus_tag=AC56_RS09965;old_locus_tag=AC56_2707
NZ_JJLS01000215.1	Protein Homology	CDS	37122	37400	.	-	0	ID=cds-WP_000559764.1;Parent=gene-AC56_RS09965;Dbxref=GenBank:WP_000559764.1;Name=WP_000559764.1;gbkey=CDS;gene=yfcL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311236.1;locus_tag=AC56_RS09965;product=YfcL family protein;protein_id=WP_000559764.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	37434	37982	.	-	.	ID=gene-AC56_RS09960;Name=epmC;gbkey=Gene;gene=epmC;gene_biotype=protein_coding;locus_tag=AC56_RS09960;old_locus_tag=AC56_2708
NZ_JJLS01000215.1	Protein Homology	CDS	37434	37982	.	-	0	ID=cds-WP_001634556.1;Parent=gene-AC56_RS09960;Dbxref=GenBank:WP_001634556.1;Name=WP_001634556.1;gbkey=CDS;gene=epmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708208.1;locus_tag=AC56_RS09960;product=elongation factor P hydroxylase;protein_id=WP_001634556.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	37982	38791	.	-	.	ID=gene-AC56_RS09955;Name=yfcA;gbkey=Gene;gene=yfcA;gene_biotype=protein_coding;locus_tag=AC56_RS09955;old_locus_tag=AC56_2709
NZ_JJLS01000215.1	Protein Homology	CDS	37982	38791	.	-	0	ID=cds-WP_032278634.1;Parent=gene-AC56_RS09955;Dbxref=GenBank:WP_032278634.1;Name=WP_032278634.1;gbkey=CDS;gene=yfcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311238.1;locus_tag=AC56_RS09955;product=sulfite exporter TauE/SafE family protein;protein_id=WP_032278634.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	38791	39615	.	-	.	ID=gene-AC56_RS09950;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=AC56_RS09950;old_locus_tag=AC56_2710
NZ_JJLS01000215.1	Protein Homology	CDS	38791	39615	.	-	0	ID=cds-WP_001043816.1;Parent=gene-AC56_RS09950;Dbxref=GenBank:WP_001043816.1;Name=WP_001043816.1;Ontology_term=GO:0006508,GO:0004252,GO:0030288;gbkey=CDS;gene=mepA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416831.1;locus_tag=AC56_RS09950;product=penicillin-insensitive murein endopeptidase;protein_id=WP_001043816.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	39619	40704	.	-	.	ID=gene-AC56_RS09945;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=AC56_RS09945;old_locus_tag=AC56_2711
NZ_JJLS01000215.1	Protein Homology	CDS	39619	40704	.	-	0	ID=cds-WP_021575261.1;Parent=gene-AC56_RS09945;Dbxref=GenBank:WP_021575261.1;Name=WP_021575261.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129642.1;locus_tag=AC56_RS09945;product=chorismate synthase;protein_id=WP_021575261.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	40739	41671	.	-	.	ID=gene-AC56_RS09940;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=AC56_RS09940;old_locus_tag=AC56_2712
NZ_JJLS01000215.1	Protein Homology	CDS	40739	41671	.	-	0	ID=cds-WP_001295704.1;Parent=gene-AC56_RS09940;Dbxref=GenBank:WP_001295704.1;Name=WP_001295704.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129736.1;locus_tag=AC56_RS09940;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_001295704.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	41837	42388	.	+	.	ID=gene-AC56_RS09935;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=AC56_RS09935;old_locus_tag=AC56_2713
NZ_JJLS01000215.1	Protein Homology	CDS	41837	42388	.	+	0	ID=cds-WP_000730806.1;Parent=gene-AC56_RS09935;Dbxref=GenBank:WP_000730806.1;Name=WP_000730806.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416834.1;locus_tag=AC56_RS09935;product=endonuclease SmrB;protein_id=WP_000730806.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	42460	43317	.	-	.	ID=gene-AC56_RS09930;Name=AC56_RS09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS09930;old_locus_tag=AC56_2714
NZ_JJLS01000215.1	Protein Homology	CDS	42460	43317	.	-	0	ID=cds-WP_000698770.1;Parent=gene-AC56_RS09930;Dbxref=GenBank:WP_000698770.1;Name=WP_000698770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698770.1;locus_tag=AC56_RS09930;product=StfH/YfcO family fimbrial adhesin;protein_id=WP_000698770.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	43319	43858	.	-	.	ID=gene-AC56_RS09925;Name=AC56_RS09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS09925;old_locus_tag=AC56_2715
NZ_JJLS01000215.1	Protein Homology	CDS	43319	43858	.	-	0	ID=cds-WP_000844747.1;Parent=gene-AC56_RS09925;Dbxref=GenBank:WP_000844747.1;Name=WP_000844747.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016242288.1;locus_tag=AC56_RS09925;product=fimbrial protein;protein_id=WP_000844747.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	43855	44343	.	-	.	ID=gene-AC56_RS09920;Name=AC56_RS09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS09920;old_locus_tag=AC56_2716
NZ_JJLS01000215.1	Protein Homology	CDS	43855	44343	.	-	0	ID=cds-WP_000714137.1;Parent=gene-AC56_RS09920;Dbxref=GenBank:WP_000714137.1;Name=WP_000714137.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416837.1;locus_tag=AC56_RS09920;product=fimbrial protein;protein_id=WP_000714137.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	44340	44849	.	-	.	ID=gene-AC56_RS09915;Name=AC56_RS09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS09915;old_locus_tag=AC56_2717
NZ_JJLS01000215.1	Protein Homology	CDS	44340	44849	.	-	0	ID=cds-WP_032278639.1;Parent=gene-AC56_RS09915;Dbxref=GenBank:WP_032278639.1;Name=WP_032278639.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001733155.1;locus_tag=AC56_RS09915;product=fimbrial protein;protein_id=WP_032278639.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	44865	45617	.	-	.	ID=gene-AC56_RS09910;Name=AC56_RS09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS09910;old_locus_tag=AC56_2718
NZ_JJLS01000215.1	Protein Homology	CDS	44865	45617	.	-	0	ID=cds-WP_032282781.1;Parent=gene-AC56_RS09910;Dbxref=GenBank:WP_032282781.1;Name=WP_032282781.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000482750.1;locus_tag=AC56_RS09910;product=fimbria/pilus periplasmic chaperone;protein_id=WP_032282781.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	45637	48282	.	-	.	ID=gene-AC56_RS09905;Name=yfcU;gbkey=Gene;gene=yfcU;gene_biotype=protein_coding;locus_tag=AC56_RS09905;old_locus_tag=AC56_2719
NZ_JJLS01000215.1	Protein Homology	CDS	45637	48282	.	-	0	ID=cds-WP_032278642.1;Parent=gene-AC56_RS09905;Dbxref=GenBank:WP_032278642.1;Name=WP_032278642.1;gbkey=CDS;gene=yfcU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112832.1;locus_tag=AC56_RS09905;product=fimbrial usher protein YfcU;protein_id=WP_032278642.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	48365	48928	.	-	.	ID=gene-AC56_RS09900;Name=yfcV;gbkey=Gene;gene=yfcV;gene_biotype=protein_coding;locus_tag=AC56_RS09900;old_locus_tag=AC56_2720
NZ_JJLS01000215.1	Protein Homology	CDS	48365	48928	.	-	0	ID=cds-WP_032278645.1;Parent=gene-AC56_RS09900;Dbxref=GenBank:WP_032278645.1;Name=WP_032278645.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=yfcV;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416841.1;locus_tag=AC56_RS09900;product=fimbrial protein;protein_id=WP_032278645.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	49612	50097	.	-	.	ID=gene-AC56_RS09895;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=AC56_RS09895;old_locus_tag=AC56_2721
NZ_JJLS01000215.1	Protein Homology	CDS	49612	50097	.	-	0	ID=cds-WP_001195819.1;Parent=gene-AC56_RS09895;Dbxref=GenBank:WP_001195819.1;Name=WP_001195819.1;Ontology_term=GO:0036211,GO:0101006,GO:0005737;gbkey=CDS;gene=sixA;go_component=cytoplasm|0005737||IEA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416842.1;locus_tag=AC56_RS09895;product=phosphohistidine phosphatase SixA;protein_id=WP_001195819.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	50300	52444	.	-	.	ID=gene-AC56_RS09890;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=AC56_RS09890;old_locus_tag=AC56_2722
NZ_JJLS01000215.1	Protein Homology	CDS	50300	52444	.	-	0	ID=cds-WP_032278647.1;Parent=gene-AC56_RS09890;Dbxref=GenBank:WP_032278647.1;Name=WP_032278647.1;Ontology_term=GO:0009062,GO:0003857,GO:0004300,GO:0008692,GO:0051287;gbkey=CDS;gene=fadJ;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA,NAD binding|0051287||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708223.1;locus_tag=AC56_RS09890;product=fatty acid oxidation complex subunit alpha FadJ;protein_id=WP_032278647.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	52444	53754	.	-	.	ID=gene-AC56_RS09885;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=protein_coding;locus_tag=AC56_RS09885;old_locus_tag=AC56_2723
NZ_JJLS01000215.1	Protein Homology	CDS	52444	53754	.	-	0	ID=cds-WP_032282782.1;Parent=gene-AC56_RS09885;Dbxref=GenBank:WP_032282782.1;Name=WP_032282782.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadI;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416844.1;locus_tag=AC56_RS09885;product=acetyl-CoA C-acyltransferase FadI;protein_id=WP_032282782.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	53934	54218	.	-	.	ID=gene-AC56_RS09880;Name=yfcZ;gbkey=Gene;gene=yfcZ;gene_biotype=protein_coding;locus_tag=AC56_RS09880;old_locus_tag=AC56_2724
NZ_JJLS01000215.1	Protein Homology	CDS	53934	54218	.	-	0	ID=cds-WP_000030901.1;Parent=gene-AC56_RS09880;Dbxref=GenBank:WP_000030901.1;Name=WP_000030901.1;gbkey=CDS;gene=yfcZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129756.1;locus_tag=AC56_RS09880;product=YfcZ/YiiS family protein;protein_id=WP_000030901.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	gene	54590	55930	.	+	.	ID=gene-AC56_RS09875;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;locus_tag=AC56_RS09875;old_locus_tag=AC56_2725
NZ_JJLS01000215.1	Protein Homology	CDS	54590	55930	.	+	0	ID=cds-WP_001295701.1;Parent=gene-AC56_RS09875;Dbxref=GenBank:WP_001295701.1;Name=WP_001295701.1;gbkey=CDS;gene=fadL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416846.2;locus_tag=AC56_RS09875;product=long-chain fatty acid transporter FadL;protein_id=WP_001295701.1;transl_table=11
NZ_JJLS01000215.1	RefSeq	pseudogene	56297	57106	.	+	.	ID=gene-AC56_RS33950;Name=AC56_RS33950;end_range=57106,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33950;old_locus_tag=AC56_2726;partial=true;pseudo=true
NZ_JJLS01000215.1	Protein Homology	CDS	56297	57106	.	+	0	ID=cds-AC56_RS33950;Parent=gene-AC56_RS33950;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=57106,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311255.1;locus_tag=AC56_RS33950;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_JJLS01000215.1	RefSeq	pseudogene	57164	57690	.	-	.	ID=gene-AC56_RS09865;Name=AC56_RS09865;end_range=57690,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS09865;old_locus_tag=AC56_2727;partial=true;pseudo=true
NZ_JJLS01000215.1	Protein Homology	CDS	57164	57690	.	-	2	ID=cds-AC56_RS09865;Parent=gene-AC56_RS09865;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=57690,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS09865;partial=true;product=IS5-like element IS903 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000216.1 1 42067
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000216.1	RefSeq	region	1	42067	.	+	.	ID=NZ_JJLS01000216.1:1..42067;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000216.1	RefSeq	gene	1	461	.	-	.	ID=gene-AC56_RS09860;Name=AC56_RS09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS09860;old_locus_tag=AC56_2728;partial=true;start_range=.,1
NZ_JJLS01000216.1	Protein Homology	CDS	1	461	.	-	0	ID=cds-WP_032278299.1-2;Parent=gene-AC56_RS09860;Dbxref=GenBank:WP_032278299.1;Name=WP_032278299.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS09860;partial=true;product=IS5 family transposase;protein_id=WP_032278299.1;start_range=.,1;transl_table=11
NZ_JJLS01000216.1	RefSeq	pseudogene	493	948	.	+	.	ID=gene-AC56_RS0126625;Name=AC56_RS0126625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0126625;partial=true;pseudo=true;start_range=.,493
NZ_JJLS01000216.1	Protein Homology	CDS	493	948	.	+	0	ID=cds-AC56_RS0126625;Parent=gene-AC56_RS0126625;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416847.1;locus_tag=AC56_RS0126625;partial=true;product=hypothetical protein;pseudo=true;start_range=.,493;transl_table=11
NZ_JJLS01000216.1	RefSeq	gene	1130	1885	.	-	.	ID=gene-AC56_RS09855;Name=mlaA;gbkey=Gene;gene=mlaA;gene_biotype=protein_coding;locus_tag=AC56_RS09855;old_locus_tag=AC56_2730
NZ_JJLS01000216.1	Protein Homology	CDS	1130	1885	.	-	0	ID=cds-WP_000776768.1;Parent=gene-AC56_RS09855;Dbxref=GenBank:WP_000776768.1;Name=WP_000776768.1;Ontology_term=GO:0016020;gbkey=CDS;gene=mlaA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311256.1;locus_tag=AC56_RS09855;product=phospholipid-binding lipoprotein MlaA;protein_id=WP_000776768.1;transl_table=11
NZ_JJLS01000216.1	RefSeq	gene	2179	3111	.	+	.	ID=gene-AC56_RS09850;Name=yfdC;gbkey=Gene;gene=yfdC;gene_biotype=protein_coding;locus_tag=AC56_RS09850;old_locus_tag=AC56_2732
NZ_JJLS01000216.1	Protein Homology	CDS	2179	3111	.	+	0	ID=cds-WP_000368117.1;Parent=gene-AC56_RS09850;Dbxref=GenBank:WP_000368117.1;Name=WP_000368117.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yfdC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416849.1;locus_tag=AC56_RS09850;product=formate/nitrite transporter family protein;protein_id=WP_000368117.1;transl_table=11
NZ_JJLS01000216.1	RefSeq	gene	3187	3261	.	+	.	ID=gene-AC56_RS09845;Name=AC56_RS09845;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS09845;old_locus_tag=AC56_2733
NZ_JJLS01000216.1	tRNAscan-SE	tRNA	3187	3261	.	+	.	ID=rna-AC56_RS09845;Parent=gene-AC56_RS09845;anticodon=(pos:3220..3222);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS09845;product=tRNA-Arg
NZ_JJLS01000216.1	tRNAscan-SE	exon	3187	3261	.	+	.	ID=exon-AC56_RS09845-1;Parent=rna-AC56_RS09845;anticodon=(pos:3220..3222);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS09845;product=tRNA-Arg
NZ_JJLS01000216.1	RefSeq	gene	3357	4292	.	-	.	ID=gene-AC56_RS09840;Name=dsdC;gbkey=Gene;gene=dsdC;gene_biotype=protein_coding;locus_tag=AC56_RS09840;old_locus_tag=AC56_2734
NZ_JJLS01000216.1	Protein Homology	CDS	3357	4292	.	-	0	ID=cds-WP_001300996.1;Parent=gene-AC56_RS09840;Dbxref=GenBank:WP_001300996.1;Name=WP_001300996.1;Ontology_term=GO:0006355,GO:0009063,GO:0003677,GO:0003700,GO:0005737;gbkey=CDS;gene=dsdC;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416865.1;locus_tag=AC56_RS09840;product=DNA-binding transcriptional regulator DsdC;protein_id=WP_001300996.1;transl_table=11
NZ_JJLS01000216.1	RefSeq	gene	4510	5847	.	+	.	ID=gene-AC56_RS09835;Name=dsdX;gbkey=Gene;gene=dsdX;gene_biotype=protein_coding;locus_tag=AC56_RS09835;old_locus_tag=AC56_2735
NZ_JJLS01000216.1	Protein Homology	CDS	4510	5847	.	+	0	ID=cds-WP_032278654.1;Parent=gene-AC56_RS09835;Dbxref=GenBank:WP_032278654.1;Name=WP_032278654.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=dsdX;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416866.1;locus_tag=AC56_RS09835;product=D-serine transporter DsdX;protein_id=WP_032278654.1;transl_table=11
NZ_JJLS01000216.1	RefSeq	gene	5865	7193	.	+	.	ID=gene-AC56_RS09830;Name=dsdA;gbkey=Gene;gene=dsdA;gene_biotype=protein_coding;locus_tag=AC56_RS09830;old_locus_tag=AC56_2736
NZ_JJLS01000216.1	Protein Homology	CDS	5865	7193	.	+	0	ID=cds-WP_000426427.1;Parent=gene-AC56_RS09830;Dbxref=GenBank:WP_000426427.1;Name=WP_000426427.1;Ontology_term=GO:0046416,GO:0008721,GO:0030170;gbkey=CDS;gene=dsdA;go_function=D-serine ammonia-lyase activity|0008721||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=D-amino acid metabolic process|0046416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416867.1;locus_tag=AC56_RS09830;product=D-serine ammonia-lyase;protein_id=WP_000426427.1;transl_table=11
NZ_JJLS01000216.1	RefSeq	gene	7301	8839	.	-	.	ID=gene-AC56_RS09825;Name=emrY;gbkey=Gene;gene=emrY;gene_biotype=protein_coding;locus_tag=AC56_RS09825;old_locus_tag=AC56_2737
NZ_JJLS01000216.1	Protein Homology	CDS	7301	8839	.	-	0	ID=cds-WP_001018730.1;Parent=gene-AC56_RS09825;Dbxref=GenBank:WP_001018730.1;Name=WP_001018730.1;gbkey=CDS;gene=emrY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416868.1;locus_tag=AC56_RS09825;product=multidrug efflux MFS transporter permease subunit EmrY;protein_id=WP_001018730.1;transl_table=11
NZ_JJLS01000216.1	RefSeq	gene	8839	10002	.	-	.	ID=gene-AC56_RS09820;Name=emrK;gbkey=Gene;gene=emrK;gene_biotype=protein_coding;locus_tag=AC56_RS09820;old_locus_tag=AC56_2738
NZ_JJLS01000216.1	Protein Homology	CDS	8839	10002	.	-	0	ID=cds-WP_001685269.1;Parent=gene-AC56_RS09820;Dbxref=GenBank:WP_001685269.1;Name=WP_001685269.1;gbkey=CDS;gene=emrK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311274.1;locus_tag=AC56_RS09820;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrK;protein_id=WP_001685269.1;transl_table=11
NZ_JJLS01000216.1	RefSeq	gene	10418	11032	.	+	.	ID=gene-AC56_RS09815;Name=evgA;gbkey=Gene;gene=evgA;gene_biotype=protein_coding;locus_tag=AC56_RS09815;old_locus_tag=AC56_2739
NZ_JJLS01000216.1	Protein Homology	CDS	10418	11032	.	+	0	ID=cds-WP_000991370.1;Parent=gene-AC56_RS09815;Dbxref=GenBank:WP_000991370.1;Name=WP_000991370.1;gbkey=CDS;gene=evgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311275.1;locus_tag=AC56_RS09815;product=acid-sensing system DNA-binding response regulator EvgA;protein_id=WP_000991370.1;transl_table=11
NZ_JJLS01000216.1	RefSeq	gene	11037	14630	.	+	.	ID=gene-AC56_RS09810;Name=evgS;gbkey=Gene;gene=evgS;gene_biotype=protein_coding;locus_tag=AC56_RS09810;old_locus_tag=AC56_2740
NZ_JJLS01000216.1	Protein Homology	CDS	11037	14630	.	+	0	ID=cds-WP_001300674.1;Parent=gene-AC56_RS09810;Dbxref=GenBank:WP_001300674.1;Name=WP_001300674.1;Ontology_term=GO:0010447,GO:0004673;gbkey=CDS;gene=evgS;go_function=protein histidine kinase activity|0004673||IEA;go_process=response to acidic pH|0010447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416871.1;locus_tag=AC56_RS09810;product=acid-sensing system histidine kinase EvgS;protein_id=WP_001300674.1;transl_table=11
NZ_JJLS01000216.1	RefSeq	gene	14686	15831	.	-	.	ID=gene-AC56_RS09805;Name=yfdE;gbkey=Gene;gene=yfdE;gene_biotype=protein_coding;locus_tag=AC56_RS09805;old_locus_tag=AC56_2741
NZ_JJLS01000216.1	Protein Homology	CDS	14686	15831	.	-	0	ID=cds-WP_001296867.1;Parent=gene-AC56_RS09805;Dbxref=GenBank:WP_001296867.1;Name=WP_001296867.1;gbkey=CDS;gene=yfdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416872.4;locus_tag=AC56_RS09805;product=CoA:oxalate CoA-transferase;protein_id=WP_001296867.1;transl_table=11
NZ_JJLS01000216.1	RefSeq	gene	15905	16849	.	-	.	ID=gene-AC56_RS09800;Name=yfdV;gbkey=Gene;gene=yfdV;gene_biotype=protein_coding;locus_tag=AC56_RS09800;old_locus_tag=AC56_2742
NZ_JJLS01000216.1	Protein Homology	CDS	15905	16849	.	-	0	ID=cds-WP_000955028.1;Parent=gene-AC56_RS09800;Dbxref=GenBank:WP_000955028.1;Name=WP_000955028.1;gbkey=CDS;gene=yfdV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311279.1;locus_tag=AC56_RS09800;product=transporter YfdV;protein_id=WP_000955028.1;transl_table=11
NZ_JJLS01000216.1	RefSeq	gene	16919	18613	.	-	.	ID=gene-AC56_RS09795;Name=oxc;gbkey=Gene;gene=oxc;gene_biotype=protein_coding;locus_tag=AC56_RS09795;old_locus_tag=AC56_2743
NZ_JJLS01000216.1	Protein Homology	CDS	16919	18613	.	-	0	ID=cds-WP_001283499.1;Parent=gene-AC56_RS09795;Dbxref=GenBank:WP_001283499.1;Name=WP_001283499.1;Ontology_term=GO:0033611,GO:0000287,GO:0008949,GO:0030976;gbkey=CDS;gene=oxc;go_function=magnesium ion binding|0000287||IEA,oxalyl-CoA decarboxylase activity|0008949||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=oxalate catabolic process|0033611||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311280.1;locus_tag=AC56_RS09795;product=oxalyl-CoA decarboxylase;protein_id=WP_001283499.1;transl_table=11
NZ_JJLS01000216.1	RefSeq	gene	18667	19917	.	-	.	ID=gene-AC56_RS09790;Name=frc;gbkey=Gene;gene=frc;gene_biotype=protein_coding;locus_tag=AC56_RS09790;old_locus_tag=AC56_2744
NZ_JJLS01000216.1	Protein Homology	CDS	18667	19917	.	-	0	ID=cds-WP_000106759.1;Parent=gene-AC56_RS09790;Dbxref=GenBank:WP_000106759.1;Name=WP_000106759.1;Ontology_term=GO:0033611,GO:0033608;gbkey=CDS;gene=frc;go_function=formyl-CoA transferase activity|0033608||IEA;go_process=oxalate catabolic process|0033611||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416875.1;locus_tag=AC56_RS09790;product=formyl-CoA transferase;protein_id=WP_000106759.1;transl_table=11
NZ_JJLS01000216.1	RefSeq	gene	20430	21062	.	-	.	ID=gene-AC56_RS09785;Name=yfdX;gbkey=Gene;gene=yfdX;gene_biotype=protein_coding;locus_tag=AC56_RS09785;old_locus_tag=AC56_2745
NZ_JJLS01000216.1	Protein Homology	CDS	20430	21062	.	-	0	ID=cds-WP_000825604.1;Parent=gene-AC56_RS09785;Dbxref=GenBank:WP_000825604.1;Name=WP_000825604.1;gbkey=CDS;gene=yfdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708246.1;locus_tag=AC56_RS09785;product=YfdX family protein;protein_id=WP_000825604.1;transl_table=11
NZ_JJLS01000216.1	RefSeq	gene	21358	21633	.	+	.	ID=gene-AC56_RS0126630;Name=ypdI;gbkey=Gene;gene=ypdI;gene_biotype=protein_coding;locus_tag=AC56_RS0126630
NZ_JJLS01000216.1	Protein Homology	CDS	21358	21633	.	+	0	ID=cds-WP_000867637.1;Parent=gene-AC56_RS0126630;Dbxref=GenBank:WP_000867637.1;Name=WP_000867637.1;gbkey=CDS;gene=ypdI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439267.1;locus_tag=AC56_RS0126630;product=colanic acid biosynthesis lipoprotein YpdI;protein_id=WP_000867637.1;transl_table=11
NZ_JJLS01000216.1	RefSeq	gene	21710	21952	.	-	.	ID=gene-AC56_RS09780;Name=yfdY;gbkey=Gene;gene=yfdY;gene_biotype=protein_coding;locus_tag=AC56_RS09780;old_locus_tag=AC56_2746
NZ_JJLS01000216.1	Protein Homology	CDS	21710	21952	.	-	0	ID=cds-WP_000639883.1;Parent=gene-AC56_RS09780;Dbxref=GenBank:WP_000639883.1;Name=WP_000639883.1;gbkey=CDS;gene=yfdY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708247.1;locus_tag=AC56_RS09780;product=YfdY family protein;protein_id=WP_000639883.1;transl_table=11
NZ_JJLS01000216.1	RefSeq	gene	22305	23225	.	+	.	ID=gene-AC56_RS09775;Name=lpxP;gbkey=Gene;gene=lpxP;gene_biotype=protein_coding;locus_tag=AC56_RS09775;old_locus_tag=AC56_2747
NZ_JJLS01000216.1	Protein Homology	CDS	22305	23225	.	+	0	ID=cds-WP_000484404.1;Parent=gene-AC56_RS09775;Dbxref=GenBank:WP_000484404.1;Name=WP_000484404.1;Ontology_term=GO:0009409,GO:0036104,GO:0008951,GO:0016020;gbkey=CDS;gene=lpxP;go_component=membrane|0016020||IEA;go_function=palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity|0008951||IEA;go_process=response to cold|0009409||IEA,Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311285.2;locus_tag=AC56_RS09775;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;protein_id=WP_000484404.1;transl_table=11
NZ_JJLS01000216.1	RefSeq	gene	23581	23652	.	+	.	ID=gene-AC56_RS31450;Name=ypdK;gbkey=Gene;gene=ypdK;gene_biotype=protein_coding;locus_tag=AC56_RS31450
NZ_JJLS01000216.1	Protein Homology	CDS	23581	23652	.	+	0	ID=cds-WP_010723117.1;Parent=gene-AC56_RS31450;Dbxref=GenBank:WP_010723117.1;Name=WP_010723117.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ypdK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_077777854.1;locus_tag=AC56_RS31450;product=membrane protein YpdK;protein_id=WP_010723117.1;transl_table=11
NZ_JJLS01000216.1	RefSeq	gene	23717	24955	.	-	.	ID=gene-AC56_RS09770;Name=alaC;gbkey=Gene;gene=alaC;gene_biotype=protein_coding;locus_tag=AC56_RS09770;old_locus_tag=AC56_2749
NZ_JJLS01000216.1	Protein Homology	CDS	23717	24955	.	-	0	ID=cds-WP_000785931.1;Parent=gene-AC56_RS09770;Dbxref=GenBank:WP_000785931.1;Name=WP_000785931.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=alaC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416880.1;locus_tag=AC56_RS09770;product=alanine transaminase;protein_id=WP_000785931.1;transl_table=11
NZ_JJLS01000216.1	RefSeq	gene	25331	27028	.	+	.	ID=gene-AC56_RS09765;Name=ypdA;gbkey=Gene;gene=ypdA;gene_biotype=protein_coding;locus_tag=AC56_RS09765;old_locus_tag=AC56_2750
NZ_JJLS01000216.1	Protein Homology	CDS	25331	27028	.	+	0	ID=cds-WP_032278663.1;Parent=gene-AC56_RS09765;Dbxref=GenBank:WP_032278663.1;Name=WP_032278663.1;gbkey=CDS;gene=ypdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311287.1;locus_tag=AC56_RS09765;product=two-component system sensor histidine kinase YpdA;protein_id=WP_032278663.1;transl_table=11
NZ_JJLS01000216.1	RefSeq	gene	27043	27777	.	+	.	ID=gene-AC56_RS09760;Name=ypdB;gbkey=Gene;gene=ypdB;gene_biotype=protein_coding;locus_tag=AC56_RS09760;old_locus_tag=AC56_2751
NZ_JJLS01000216.1	Protein Homology	CDS	27043	27777	.	+	0	ID=cds-WP_001295458.1;Parent=gene-AC56_RS09760;Dbxref=GenBank:WP_001295458.1;Name=WP_001295458.1;gbkey=CDS;gene=ypdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311288.1;locus_tag=AC56_RS09760;product=two-component system response regulator YpdB;protein_id=WP_001295458.1;transl_table=11
NZ_JJLS01000216.1	RefSeq	gene	27790	28647	.	+	.	ID=gene-AC56_RS09755;Name=ypdC;gbkey=Gene;gene=ypdC;gene_biotype=protein_coding;locus_tag=AC56_RS09755;old_locus_tag=AC56_2752
NZ_JJLS01000216.1	Protein Homology	CDS	27790	28647	.	+	0	ID=cds-WP_000646835.1;Parent=gene-AC56_RS09755;Dbxref=GenBank:WP_000646835.1;Name=WP_000646835.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=ypdC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416883.1;locus_tag=AC56_RS09755;product=AraC family transcriptional regulator;protein_id=WP_000646835.1;transl_table=11
NZ_JJLS01000216.1	RefSeq	gene	28650	31145	.	-	.	ID=gene-AC56_RS09750;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=AC56_RS09750;old_locus_tag=AC56_2753
NZ_JJLS01000216.1	Protein Homology	CDS	28650	31145	.	-	0	ID=cds-WP_000955906.1;Parent=gene-AC56_RS09750;Dbxref=GenBank:WP_000955906.1;Name=WP_000955906.1;Ontology_term=GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416884.1;locus_tag=AC56_RS09750;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_000955906.1;transl_table=11
NZ_JJLS01000216.1	RefSeq	gene	31170	32207	.	-	.	ID=gene-AC56_RS09745;Name=ypdE;gbkey=Gene;gene=ypdE;gene_biotype=protein_coding;locus_tag=AC56_RS09745;old_locus_tag=AC56_2754
NZ_JJLS01000216.1	Protein Homology	CDS	31170	32207	.	-	0	ID=cds-WP_000366028.1;Parent=gene-AC56_RS09745;Dbxref=GenBank:WP_000366028.1;Name=WP_000366028.1;gbkey=CDS;gene=ypdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416885.1;locus_tag=AC56_RS09745;product=aminopeptidase;protein_id=WP_000366028.1;transl_table=11
NZ_JJLS01000216.1	RefSeq	gene	32207	33292	.	-	.	ID=gene-AC56_RS09740;Name=ypdF;gbkey=Gene;gene=ypdF;gene_biotype=protein_coding;locus_tag=AC56_RS09740;old_locus_tag=AC56_2755
NZ_JJLS01000216.1	Protein Homology	CDS	32207	33292	.	-	0	ID=cds-WP_000173291.1;Parent=gene-AC56_RS09740;Dbxref=GenBank:WP_000173291.1;Name=WP_000173291.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ypdF;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416886.1;locus_tag=AC56_RS09740;product=aminopeptidase;protein_id=WP_000173291.1;transl_table=11
NZ_JJLS01000216.1	RefSeq	gene	33307	34554	.	-	.	ID=gene-AC56_RS09735;Name=fryC;gbkey=Gene;gene=fryC;gene_biotype=protein_coding;locus_tag=AC56_RS09735;old_locus_tag=AC56_2756
NZ_JJLS01000216.1	Protein Homology	CDS	33307	34554	.	-	0	ID=cds-WP_000985359.1;Parent=gene-AC56_RS09735;Dbxref=GenBank:WP_000985359.1;Name=WP_000985359.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=fryC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416887.1;locus_tag=AC56_RS09735;product=PTS fructose transporter subunit IIC;protein_id=WP_000985359.1;transl_table=11
NZ_JJLS01000216.1	RefSeq	gene	34576	34902	.	-	.	ID=gene-AC56_RS09730;Name=fryB;gbkey=Gene;gene=fryB;gene_biotype=protein_coding;locus_tag=AC56_RS09730;old_locus_tag=AC56_2757
NZ_JJLS01000216.1	Protein Homology	CDS	34576	34902	.	-	0	ID=cds-WP_000038456.1;Parent=gene-AC56_RS09730;Dbxref=GenBank:WP_000038456.1;Name=WP_000038456.1;Ontology_term=GO:0009401,GO:0016310,GO:0016301,GO:0022877,GO:0090563,GO:0090582;gbkey=CDS;gene=fryB;go_function=kinase activity|0016301||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA,protein-phosphocysteine-sugar phosphotransferase activity|0090563||IEA,protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity|0090582||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311294.1;locus_tag=AC56_RS09730;product=PTS fructose transporter subunit IIB;protein_id=WP_000038456.1;transl_table=11
NZ_JJLS01000216.1	RefSeq	gene	35121	36086	.	-	.	ID=gene-AC56_RS09725;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=AC56_RS09725;old_locus_tag=AC56_2758
NZ_JJLS01000216.1	Protein Homology	CDS	35121	36086	.	-	0	ID=cds-WP_000170346.1;Parent=gene-AC56_RS09725;Dbxref=GenBank:WP_000170346.1;Name=WP_000170346.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005524,GO:0005536;gbkey=CDS;gene=glk;go_function=glucokinase activity|0004340||IEA,ATP binding|0005524||IEA,D-glucose binding|0005536||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311295.1;locus_tag=AC56_RS09725;product=glucokinase;protein_id=WP_000170346.1;transl_table=11
NZ_JJLS01000216.1	RefSeq	gene	36290	37546	.	+	.	ID=gene-AC56_RS09720;Name=yfeO;gbkey=Gene;gene=yfeO;gene_biotype=protein_coding;locus_tag=AC56_RS09720;old_locus_tag=AC56_2759
NZ_JJLS01000216.1	Protein Homology	CDS	36290	37546	.	+	0	ID=cds-WP_000903148.1;Parent=gene-AC56_RS09720;Dbxref=GenBank:WP_000903148.1;Name=WP_000903148.1;Ontology_term=GO:0005247;gbkey=CDS;gene=yfeO;go_function=voltage-gated chloride channel activity|0005247||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311296.1;locus_tag=AC56_RS09720;product=ion channel protein;protein_id=WP_000903148.1;transl_table=11
NZ_JJLS01000216.1	RefSeq	gene	37661	37987	.	+	.	ID=gene-AC56_RS09715;Name=ypeC;gbkey=Gene;gene=ypeC;gene_biotype=protein_coding;locus_tag=AC56_RS09715;old_locus_tag=AC56_2760
NZ_JJLS01000216.1	Protein Homology	CDS	37661	37987	.	+	0	ID=cds-WP_000490072.1;Parent=gene-AC56_RS09715;Dbxref=GenBank:WP_000490072.1;Name=WP_000490072.1;gbkey=CDS;gene=ypeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311297.1;locus_tag=AC56_RS09715;product=DUF2502 domain-containing protein YpeC;protein_id=WP_000490072.1;transl_table=11
NZ_JJLS01000216.1	RefSeq	gene	38128	39366	.	-	.	ID=gene-AC56_RS09710;Name=mntH;gbkey=Gene;gene=mntH;gene_biotype=protein_coding;locus_tag=AC56_RS09710;old_locus_tag=AC56_2761
NZ_JJLS01000216.1	Protein Homology	CDS	38128	39366	.	-	0	ID=cds-WP_024171970.1;Parent=gene-AC56_RS09710;Dbxref=GenBank:WP_024171970.1;Name=WP_024171970.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mntH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311298.1;locus_tag=AC56_RS09710;product=Nramp family divalent metal transporter;protein_id=WP_024171970.1;transl_table=11
NZ_JJLS01000216.1	RefSeq	gene	39347	39436	.	-	.	ID=gene-AC56_RS33955;Name=AC56_RS33955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33955
NZ_JJLS01000216.1	Protein Homology	CDS	39347	39436	.	-	0	ID=cds-WP_240811045.1;Parent=gene-AC56_RS33955;Dbxref=GenBank:WP_240811045.1;Name=WP_240811045.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049535.1;locus_tag=AC56_RS33955;product=protein YpeD;protein_id=WP_240811045.1;transl_table=11
NZ_JJLS01000216.1	RefSeq	gene	39702	40904	.	+	.	ID=gene-AC56_RS09705;Name=nupC;gbkey=Gene;gene=nupC;gene_biotype=protein_coding;locus_tag=AC56_RS09705;old_locus_tag=AC56_2762
NZ_JJLS01000216.1	Protein Homology	CDS	39702	40904	.	+	0	ID=cds-WP_000376337.1;Parent=gene-AC56_RS09705;Dbxref=GenBank:WP_000376337.1;Name=WP_000376337.1;gbkey=CDS;gene=nupC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416894.1;locus_tag=AC56_RS09705;product=nucleoside permease NupC;protein_id=WP_000376337.1;transl_table=11
NZ_JJLS01000216.1	RefSeq	gene	41107	42067	.	-	.	ID=gene-AC56_RS09700;Name=AC56_RS09700;end_range=42067,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS09700;old_locus_tag=AC56_2763;partial=true
NZ_JJLS01000216.1	Protein Homology	CDS	41107	42067	.	-	1	ID=cds-WP_032282478.1-12;Parent=gene-AC56_RS09700;Dbxref=GenBank:WP_032282478.1;Name=WP_032282478.1;Ontology_term=GO:0006313,GO:0004803;end_range=42067,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS09700;partial=true;product=IS4-like element IS421 family transposase;protein_id=WP_032282478.1;transl_table=11
##sequence-region NZ_JJLS01000217.1 1 2047
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000217.1	RefSeq	region	1	2047	.	+	.	ID=NZ_JJLS01000217.1:1..2047;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000217.1	RefSeq	gene	1	733	.	-	.	ID=gene-AC56_RS09695;Name=AC56_RS09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS09695;old_locus_tag=AC56_2764;partial=true;start_range=.,1
NZ_JJLS01000217.1	Protein Homology	CDS	1	733	.	-	0	ID=cds-WP_077712475.1;Parent=gene-AC56_RS09695;Dbxref=GenBank:WP_077712475.1;Name=WP_077712475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311300.1;locus_tag=AC56_RS09695;partial=true;product=MASE1 domain-containing protein;protein_id=WP_077712475.1;start_range=.,1;transl_table=11
NZ_JJLS01000217.1	RefSeq	gene	942	1017	.	-	.	ID=gene-AC56_RS09690;Name=AC56_RS09690;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS09690;old_locus_tag=AC56_2765
NZ_JJLS01000217.1	tRNAscan-SE	tRNA	942	1017	.	-	.	ID=rna-AC56_RS09690;Parent=gene-AC56_RS09690;anticodon=(pos:complement(982..984));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS09690;product=tRNA-Ala
NZ_JJLS01000217.1	tRNAscan-SE	exon	942	1017	.	-	.	ID=exon-AC56_RS09690-1;Parent=rna-AC56_RS09690;anticodon=(pos:complement(982..984));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS09690;product=tRNA-Ala
NZ_JJLS01000217.1	RefSeq	gene	1057	1132	.	-	.	ID=gene-AC56_RS09685;Name=AC56_RS09685;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS09685;old_locus_tag=AC56_2766
NZ_JJLS01000217.1	tRNAscan-SE	tRNA	1057	1132	.	-	.	ID=rna-AC56_RS09685;Parent=gene-AC56_RS09685;anticodon=(pos:complement(1097..1099));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS09685;product=tRNA-Ala
NZ_JJLS01000217.1	tRNAscan-SE	exon	1057	1132	.	-	.	ID=exon-AC56_RS09685-1;Parent=rna-AC56_RS09685;anticodon=(pos:complement(1097..1099));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS09685;product=tRNA-Ala
NZ_JJLS01000217.1	RefSeq	gene	1353	1712	.	+	.	ID=gene-AC56_RS09680;Name=AC56_RS09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS09680;old_locus_tag=AC56_2767
NZ_JJLS01000217.1	Protein Homology	CDS	1353	1712	.	+	0	ID=cds-WP_000472021.1-2;Parent=gene-AC56_RS09680;Dbxref=GenBank:WP_000472021.1;Name=WP_000472021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311301.3;locus_tag=AC56_RS09680;product=YfeC-like transcriptional regulator;protein_id=WP_000472021.1;transl_table=11
NZ_JJLS01000217.1	RefSeq	gene	1714	2047	.	+	.	ID=gene-AC56_RS09675;Name=AC56_RS09675;end_range=2047,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS09675;old_locus_tag=AC56_2768;partial=true
NZ_JJLS01000217.1	Protein Homology	CDS	1714	2047	.	+	0	ID=cds-WP_032228427.1;Parent=gene-AC56_RS09675;Dbxref=GenBank:WP_032228427.1;Name=WP_032228427.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;end_range=2047,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416898.3;locus_tag=AC56_RS09675;partial=true;product=MerR family transcriptional regulator;protein_id=WP_032228427.1;transl_table=11
##sequence-region NZ_JJLS01000218.1 1 2047
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000218.1	RefSeq	region	1	2047	.	+	.	ID=NZ_JJLS01000218.1:1..2047;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000218.1	RefSeq	gene	68	1483	.	-	.	ID=gene-AC56_RS09670;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=AC56_RS09670;old_locus_tag=AC56_2769
NZ_JJLS01000218.1	Protein Homology	CDS	68	1483	.	-	0	ID=cds-WP_000695655.1-2;Parent=gene-AC56_RS09670;Dbxref=GenBank:WP_000695655.1;Name=WP_000695655.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416899.1;locus_tag=AC56_RS09670;product=glutamate--tRNA ligase;protein_id=WP_000695655.1;transl_table=11
NZ_JJLS01000218.1	RefSeq	gene	1742	1817	.	+	.	ID=gene-AC56_RS09665;Name=AC56_RS09665;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS09665;old_locus_tag=AC56_2771
NZ_JJLS01000218.1	tRNAscan-SE	tRNA	1742	1817	.	+	.	ID=rna-AC56_RS09665;Parent=gene-AC56_RS09665;anticodon=(pos:1775..1777);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS09665;product=tRNA-Val
NZ_JJLS01000218.1	tRNAscan-SE	exon	1742	1817	.	+	.	ID=exon-AC56_RS09665-1;Parent=rna-AC56_RS09665;anticodon=(pos:1775..1777);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS09665;product=tRNA-Val
NZ_JJLS01000218.1	RefSeq	gene	1862	1937	.	+	.	ID=gene-AC56_RS09660;Name=AC56_RS09660;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS09660;old_locus_tag=AC56_2772
NZ_JJLS01000218.1	tRNAscan-SE	tRNA	1862	1937	.	+	.	ID=rna-AC56_RS09660;Parent=gene-AC56_RS09660;anticodon=(pos:1895..1897);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS09660;product=tRNA-Val
NZ_JJLS01000218.1	tRNAscan-SE	exon	1862	1937	.	+	.	ID=exon-AC56_RS09660-1;Parent=rna-AC56_RS09660;anticodon=(pos:1895..1897);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS09660;product=tRNA-Val
##sequence-region NZ_JJLS01000219.1 1 2621
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000219.1	RefSeq	region	1	2621	.	+	.	ID=NZ_JJLS01000219.1:1..2621;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000219.1	RefSeq	pseudogene	1	194	.	+	.	ID=gene-AC56_RS0126645;Name=AC56_RS0126645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0126645;old_locus_tag=AC56_2774;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000219.1	Protein Homology	CDS	1	194	.	+	2	ID=cds-AC56_RS0126645;Parent=gene-AC56_RS0126645;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001646851.1;locus_tag=AC56_RS0126645;partial=true;product=PD40 domain-containing protein;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000219.1	RefSeq	gene	229	750	.	+	.	ID=gene-AC56_RS09650;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=AC56_RS09650;old_locus_tag=AC56_2775
NZ_JJLS01000219.1	Protein Homology	CDS	229	750	.	+	0	ID=cds-WP_001295306.1-3;Parent=gene-AC56_RS09650;Dbxref=GenBank:WP_001295306.1;Name=WP_001295306.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308803.1;locus_tag=AC56_RS09650;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_001295306.1;transl_table=11
NZ_JJLS01000219.1	RefSeq	gene	760	1551	.	+	.	ID=gene-AC56_RS09645;Name=cpoB;gbkey=Gene;gene=cpoB;gene_biotype=protein_coding;locus_tag=AC56_RS09645;old_locus_tag=AC56_2776
NZ_JJLS01000219.1	Protein Homology	CDS	760	1551	.	+	0	ID=cds-WP_000097580.1-3;Parent=gene-AC56_RS09645;Dbxref=GenBank:WP_000097580.1;Name=WP_000097580.1;Ontology_term=GO:0051301,GO:0070206,GO:0005515;gbkey=CDS;gene=cpoB;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA,protein trimerization|0070206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308804.1;locus_tag=AC56_RS09645;product=cell division protein CpoB;protein_id=WP_000097580.1;transl_table=11
NZ_JJLS01000219.1	RefSeq	gene	1716	1791	.	+	.	ID=gene-AC56_RS09640;Name=AC56_RS09640;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS09640;old_locus_tag=AC56_2777
NZ_JJLS01000219.1	tRNAscan-SE	tRNA	1716	1791	.	+	.	ID=rna-AC56_RS09640;Parent=gene-AC56_RS09640;anticodon=(pos:1749..1751);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS09640;product=tRNA-Lys
NZ_JJLS01000219.1	tRNAscan-SE	exon	1716	1791	.	+	.	ID=exon-AC56_RS09640-1;Parent=rna-AC56_RS09640;anticodon=(pos:1749..1751);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS09640;product=tRNA-Lys
NZ_JJLS01000219.1	RefSeq	gene	1927	2002	.	+	.	ID=gene-AC56_RS09635;Name=AC56_RS09635;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS09635;old_locus_tag=AC56_2778
NZ_JJLS01000219.1	tRNAscan-SE	tRNA	1927	2002	.	+	.	ID=rna-AC56_RS09635;Parent=gene-AC56_RS09635;anticodon=(pos:1960..1962);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS09635;product=tRNA-Val
NZ_JJLS01000219.1	tRNAscan-SE	exon	1927	2002	.	+	.	ID=exon-AC56_RS09635-1;Parent=rna-AC56_RS09635;anticodon=(pos:1960..1962);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS09635;product=tRNA-Val
NZ_JJLS01000219.1	RefSeq	gene	2005	2080	.	+	.	ID=gene-AC56_RS09630;Name=AC56_RS09630;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS09630;old_locus_tag=AC56_2779
NZ_JJLS01000219.1	tRNAscan-SE	tRNA	2005	2080	.	+	.	ID=rna-AC56_RS09630;Parent=gene-AC56_RS09630;anticodon=(pos:2038..2040);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS09630;product=tRNA-Lys
NZ_JJLS01000219.1	tRNAscan-SE	exon	2005	2080	.	+	.	ID=exon-AC56_RS09630-1;Parent=rna-AC56_RS09630;anticodon=(pos:2038..2040);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS09630;product=tRNA-Lys
NZ_JJLS01000219.1	RefSeq	gene	2132	2207	.	+	.	ID=gene-AC56_RS09625;Name=AC56_RS09625;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS09625;old_locus_tag=AC56_2780
NZ_JJLS01000219.1	tRNAscan-SE	tRNA	2132	2207	.	+	.	ID=rna-AC56_RS09625;Parent=gene-AC56_RS09625;anticodon=(pos:2165..2167);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS09625;product=tRNA-Val
NZ_JJLS01000219.1	tRNAscan-SE	exon	2132	2207	.	+	.	ID=exon-AC56_RS09625-1;Parent=rna-AC56_RS09625;anticodon=(pos:2165..2167);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS09625;product=tRNA-Val
NZ_JJLS01000219.1	RefSeq	gene	2254	2329	.	+	.	ID=gene-AC56_RS09620;Name=AC56_RS09620;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS09620;old_locus_tag=AC56_2781
NZ_JJLS01000219.1	tRNAscan-SE	tRNA	2254	2329	.	+	.	ID=rna-AC56_RS09620;Parent=gene-AC56_RS09620;anticodon=(pos:2287..2289);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS09620;product=tRNA-Val
NZ_JJLS01000219.1	tRNAscan-SE	exon	2254	2329	.	+	.	ID=exon-AC56_RS09620-1;Parent=rna-AC56_RS09620;anticodon=(pos:2287..2289);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS09620;product=tRNA-Val
NZ_JJLS01000219.1	RefSeq	gene	2332	2407	.	+	.	ID=gene-AC56_RS09615;Name=AC56_RS09615;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS09615;old_locus_tag=AC56_2782
NZ_JJLS01000219.1	tRNAscan-SE	tRNA	2332	2407	.	+	.	ID=rna-AC56_RS09615;Parent=gene-AC56_RS09615;anticodon=(pos:2365..2367);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS09615;product=tRNA-Lys
NZ_JJLS01000219.1	tRNAscan-SE	exon	2332	2407	.	+	.	ID=exon-AC56_RS09615-1;Parent=rna-AC56_RS09615;anticodon=(pos:2365..2367);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS09615;product=tRNA-Lys
##sequence-region NZ_JJLS01000220.1 1 33766
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000220.1	RefSeq	region	1	33766	.	+	.	ID=NZ_JJLS01000220.1:1..33766;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000220.1	RefSeq	gene	114	189	.	+	.	ID=gene-AC56_RS09610;Name=AC56_RS09610;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS09610;old_locus_tag=AC56_2785
NZ_JJLS01000220.1	tRNAscan-SE	tRNA	114	189	.	+	.	ID=rna-AC56_RS09610;Parent=gene-AC56_RS09610;anticodon=(pos:147..149);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS09610;product=tRNA-Val
NZ_JJLS01000220.1	tRNAscan-SE	exon	114	189	.	+	.	ID=exon-AC56_RS09610-1;Parent=rna-AC56_RS09610;anticodon=(pos:147..149);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS09610;product=tRNA-Val
NZ_JJLS01000220.1	RefSeq	gene	234	309	.	+	.	ID=gene-AC56_RS09605;Name=AC56_RS09605;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS09605;old_locus_tag=AC56_2786
NZ_JJLS01000220.1	tRNAscan-SE	tRNA	234	309	.	+	.	ID=rna-AC56_RS09605;Parent=gene-AC56_RS09605;anticodon=(pos:267..269);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS09605;product=tRNA-Val
NZ_JJLS01000220.1	tRNAscan-SE	exon	234	309	.	+	.	ID=exon-AC56_RS09605-1;Parent=rna-AC56_RS09605;anticodon=(pos:267..269);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS09605;product=tRNA-Val
NZ_JJLS01000220.1	RefSeq	gene	314	389	.	+	.	ID=gene-AC56_RS09600;Name=AC56_RS09600;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS09600;old_locus_tag=AC56_2787
NZ_JJLS01000220.1	tRNAscan-SE	tRNA	314	389	.	+	.	ID=rna-AC56_RS09600;Parent=gene-AC56_RS09600;anticodon=(pos:347..349);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS09600;product=tRNA-Lys
NZ_JJLS01000220.1	tRNAscan-SE	exon	314	389	.	+	.	ID=exon-AC56_RS09600-1;Parent=rna-AC56_RS09600;anticodon=(pos:347..349);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS09600;product=tRNA-Lys
NZ_JJLS01000220.1	RefSeq	gene	509	850	.	+	.	ID=gene-AC56_RS09595;Name=AC56_RS09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS09595;old_locus_tag=AC56_2788
NZ_JJLS01000220.1	Protein Homology	CDS	509	850	.	+	0	ID=cds-WP_000201405.1-3;Parent=gene-AC56_RS09595;Dbxref=GenBank:WP_000201405.1;Name=WP_000201405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708263.1;locus_tag=AC56_RS09595;product=FlxA-like family protein;protein_id=WP_000201405.1;transl_table=11
NZ_JJLS01000220.1	RefSeq	gene	841	1767	.	-	.	ID=gene-AC56_RS09590;Name=yfeR;gbkey=Gene;gene=yfeR;gene_biotype=protein_coding;locus_tag=AC56_RS09590;old_locus_tag=AC56_2789
NZ_JJLS01000220.1	Protein Homology	CDS	841	1767	.	-	0	ID=cds-WP_032277728.1;Parent=gene-AC56_RS09590;Dbxref=GenBank:WP_032277728.1;Name=WP_032277728.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;gene=yfeR;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416904.1;locus_tag=AC56_RS09590;product=LysR family transcriptional regulator;protein_id=WP_032277728.1;transl_table=11
NZ_JJLS01000220.1	RefSeq	gene	1857	2855	.	+	.	ID=gene-AC56_RS09585;Name=yfeH;gbkey=Gene;gene=yfeH;gene_biotype=protein_coding;locus_tag=AC56_RS09585;old_locus_tag=AC56_2790
NZ_JJLS01000220.1	Protein Homology	CDS	1857	2855	.	+	0	ID=cds-WP_000765604.1;Parent=gene-AC56_RS09585;Dbxref=GenBank:WP_000765604.1;Name=WP_000765604.1;Ontology_term=GO:0006810,GO:0015293,GO:0016020;gbkey=CDS;gene=yfeH;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311309.1;locus_tag=AC56_RS09585;product=bile acid:sodium symporter family protein;protein_id=WP_000765604.1;transl_table=11
NZ_JJLS01000220.1	RefSeq	gene	2852	3070	.	-	.	ID=gene-AC56_RS09580;Name=ypeB;gbkey=Gene;gene=ypeB;gene_biotype=protein_coding;locus_tag=AC56_RS09580;old_locus_tag=AC56_2791
NZ_JJLS01000220.1	Protein Homology	CDS	2852	3070	.	-	0	ID=cds-WP_000410201.1;Parent=gene-AC56_RS09580;Dbxref=GenBank:WP_000410201.1;Name=WP_000410201.1;gbkey=CDS;gene=ypeB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588464.1;locus_tag=AC56_RS09580;product=DUF3820 family protein;protein_id=WP_000410201.1;transl_table=11
NZ_JJLS01000220.1	RefSeq	gene	3072	5087	.	-	.	ID=gene-AC56_RS09575;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=AC56_RS09575;old_locus_tag=AC56_2792
NZ_JJLS01000220.1	Protein Homology	CDS	3072	5087	.	-	0	ID=cds-WP_032278680.1;Parent=gene-AC56_RS09575;Dbxref=GenBank:WP_032278680.1;Name=WP_032278680.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416906.1;locus_tag=AC56_RS09575;product=NAD-dependent DNA ligase LigA;protein_id=WP_032278680.1;transl_table=11
NZ_JJLS01000220.1	RefSeq	gene	5158	6144	.	-	.	ID=gene-AC56_RS09570;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=AC56_RS09570;old_locus_tag=AC56_2793
NZ_JJLS01000220.1	Protein Homology	CDS	5158	6144	.	-	0	ID=cds-WP_001471946.1;Parent=gene-AC56_RS09570;Dbxref=GenBank:WP_001471946.1;Name=WP_001471946.1;Ontology_term=GO:0000917,GO:0005515,GO:0016020;gbkey=CDS;gene=zipA;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311311.1;locus_tag=AC56_RS09570;product=cell division protein ZipA;protein_id=WP_001471946.1;transl_table=11
NZ_JJLS01000220.1	RefSeq	gene	6374	7135	.	+	.	ID=gene-AC56_RS09565;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=AC56_RS09565;old_locus_tag=AC56_2794
NZ_JJLS01000220.1	Protein Homology	CDS	6374	7135	.	+	0	ID=cds-WP_000254839.1;Parent=gene-AC56_RS09565;Dbxref=GenBank:WP_000254839.1;Name=WP_000254839.1;Ontology_term=GO:0000103,GO:0015116,GO:0005886;gbkey=CDS;gene=cysZ;go_component=plasma membrane|0005886||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311312.1;locus_tag=AC56_RS09565;product=sulfate transporter CysZ;protein_id=WP_000254839.1;transl_table=11
NZ_JJLS01000220.1	RefSeq	gene	7320	8291	.	+	.	ID=gene-AC56_RS09560;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=AC56_RS09560;old_locus_tag=AC56_2795
NZ_JJLS01000220.1	Protein Homology	CDS	7320	8291	.	+	0	ID=cds-WP_000034402.1;Parent=gene-AC56_RS09560;Dbxref=GenBank:WP_000034402.1;Name=WP_000034402.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=AC56_RS09560;product=cysteine synthase A;protein_id=WP_000034402.1;transl_table=11
NZ_JJLS01000220.1	RefSeq	gene	8675	8932	.	+	.	ID=gene-AC56_RS09555;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=AC56_RS09555;old_locus_tag=AC56_2796
NZ_JJLS01000220.1	Protein Homology	CDS	8675	8932	.	+	0	ID=cds-WP_000487600.1;Parent=gene-AC56_RS09555;Dbxref=GenBank:WP_000487600.1;Name=WP_000487600.1;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=AC56_RS09555;product=phosphocarrier protein Hpr;protein_id=WP_000487600.1;transl_table=11
NZ_JJLS01000220.1	RefSeq	gene	8977	10704	.	+	.	ID=gene-AC56_RS09550;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=AC56_RS09550;old_locus_tag=AC56_2797
NZ_JJLS01000220.1	Protein Homology	CDS	8977	10704	.	+	0	ID=cds-WP_000623136.1;Parent=gene-AC56_RS09550;Dbxref=GenBank:WP_000623136.1;Name=WP_000623136.1;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311315.1;locus_tag=AC56_RS09550;product=phosphoenolpyruvate-protein phosphotransferase PtsI;protein_id=WP_000623136.1;transl_table=11
NZ_JJLS01000220.1	RefSeq	gene	10745	11254	.	+	.	ID=gene-AC56_RS09545;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=AC56_RS09545;old_locus_tag=AC56_2798
NZ_JJLS01000220.1	Protein Homology	CDS	10745	11254	.	+	0	ID=cds-WP_000522247.1;Parent=gene-AC56_RS09545;Dbxref=GenBank:WP_000522247.1;Name=WP_000522247.1;Ontology_term=GO:0009401;gbkey=CDS;gene=crr;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833547.1;locus_tag=AC56_RS09545;product=PTS glucose transporter subunit IIA;protein_id=WP_000522247.1;transl_table=11
NZ_JJLS01000220.1	RefSeq	gene	11297	12148	.	-	.	ID=gene-AC56_RS09540;Name=pdxK;gbkey=Gene;gene=pdxK;gene_biotype=protein_coding;gene_synonym=thiJ;locus_tag=AC56_RS09540;old_locus_tag=AC56_2799
NZ_JJLS01000220.1	Protein Homology	CDS	11297	12148	.	-	0	ID=cds-WP_000096674.1;Parent=gene-AC56_RS09540;Dbxref=GenBank:WP_000096674.1;Name=WP_000096674.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxK;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416913.1;locus_tag=AC56_RS09540;product=pyridoxine/pyridoxal/pyridoxamine kinase;protein_id=WP_000096674.1;transl_table=11
NZ_JJLS01000220.1	RefSeq	gene	12253	12627	.	+	.	ID=gene-AC56_RS09535;Name=yfeK;gbkey=Gene;gene=yfeK;gene_biotype=protein_coding;locus_tag=AC56_RS09535;old_locus_tag=AC56_2800
NZ_JJLS01000220.1	Protein Homology	CDS	12253	12627	.	+	0	ID=cds-WP_000719962.1;Parent=gene-AC56_RS09535;Dbxref=GenBank:WP_000719962.1;Name=WP_000719962.1;gbkey=CDS;gene=yfeK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416914.1;locus_tag=AC56_RS09535;product=YfeK family protein;protein_id=WP_000719962.1;transl_table=11
NZ_JJLS01000220.1	RefSeq	gene	12660	13394	.	+	.	ID=gene-AC56_RS09530;Name=yfeS;gbkey=Gene;gene=yfeS;gene_biotype=protein_coding;locus_tag=AC56_RS09530;old_locus_tag=AC56_2801
NZ_JJLS01000220.1	Protein Homology	CDS	12660	13394	.	+	0	ID=cds-WP_000745534.1;Parent=gene-AC56_RS09530;Dbxref=GenBank:WP_000745534.1;Name=WP_000745534.1;gbkey=CDS;gene=yfeS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416915.1;locus_tag=AC56_RS09530;product=WGR domain-containing protein;protein_id=WP_000745534.1;transl_table=11
NZ_JJLS01000220.1	RefSeq	gene	13583	14494	.	-	.	ID=gene-AC56_RS09525;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=AC56_RS09525;old_locus_tag=AC56_2802
NZ_JJLS01000220.1	Protein Homology	CDS	13583	14494	.	-	0	ID=cds-WP_000105477.1;Parent=gene-AC56_RS09525;Dbxref=GenBank:WP_000105477.1;Name=WP_000105477.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416916.1;locus_tag=AC56_RS09525;product=cysteine synthase B;protein_id=WP_000105477.1;transl_table=11
NZ_JJLS01000220.1	RefSeq	gene	14628	15725	.	-	.	ID=gene-AC56_RS09520;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=AC56_RS09520;old_locus_tag=AC56_2803
NZ_JJLS01000220.1	Protein Homology	CDS	14628	15725	.	-	0	ID=cds-WP_032278688.1;Parent=gene-AC56_RS09520;Dbxref=GenBank:WP_032278688.1;Name=WP_032278688.1;Ontology_term=GO:1902358,GO:0005524,GO:0015419,GO:0016020,GO:0043190;gbkey=CDS;gene=cysA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416917.1;locus_tag=AC56_RS09520;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;protein_id=WP_032278688.1;transl_table=11
NZ_JJLS01000220.1	RefSeq	gene	15715	16590	.	-	.	ID=gene-AC56_RS09515;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=AC56_RS09515;old_locus_tag=AC56_2804
NZ_JJLS01000220.1	Protein Homology	CDS	15715	16590	.	-	0	ID=cds-WP_000852686.1;Parent=gene-AC56_RS09515;Dbxref=GenBank:WP_000852686.1;Name=WP_000852686.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysW;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026168.2;locus_tag=AC56_RS09515;product=sulfate/thiosulfate ABC transporter permease CysW;protein_id=WP_000852686.1;transl_table=11
NZ_JJLS01000220.1	RefSeq	gene	16590	17423	.	-	.	ID=gene-AC56_RS09510;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=AC56_RS09510;old_locus_tag=AC56_2805
NZ_JJLS01000220.1	Protein Homology	CDS	16590	17423	.	-	0	ID=cds-WP_001469059.1;Parent=gene-AC56_RS09510;Dbxref=GenBank:WP_001469059.1;Name=WP_001469059.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysT;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458418.1;locus_tag=AC56_RS09510;product=sulfate/thiosulfate ABC transporter permease CysT;protein_id=WP_001469059.1;transl_table=11
NZ_JJLS01000220.1	RefSeq	gene	17423	18439	.	-	.	ID=gene-AC56_RS09505;Name=cysP;gbkey=Gene;gene=cysP;gene_biotype=protein_coding;locus_tag=AC56_RS09505;old_locus_tag=AC56_2806
NZ_JJLS01000220.1	Protein Homology	CDS	17423	18439	.	-	0	ID=cds-WP_032278689.1;Parent=gene-AC56_RS09505;Dbxref=GenBank:WP_032278689.1;Name=WP_032278689.1;gbkey=CDS;gene=cysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311323.1;locus_tag=AC56_RS09505;product=thiosulfate/sulfate ABC transporter substrate-binding protein CysP;protein_id=WP_032278689.1;transl_table=11
NZ_JJLS01000220.1	RefSeq	gene	18597	19388	.	-	.	ID=gene-AC56_RS09500;Name=ucpA;gbkey=Gene;gene=ucpA;gene_biotype=protein_coding;locus_tag=AC56_RS09500;old_locus_tag=AC56_2807
NZ_JJLS01000220.1	Protein Homology	CDS	18597	19388	.	-	0	ID=cds-WP_000517443.1;Parent=gene-AC56_RS09500;Dbxref=GenBank:WP_000517443.1;Name=WP_000517443.1;gbkey=CDS;gene=ucpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416921.4;locus_tag=AC56_RS09500;product=SDR family oxidoreductase UcpA;protein_id=WP_000517443.1;transl_table=11
NZ_JJLS01000220.1	RefSeq	gene	19517	20374	.	-	.	ID=gene-AC56_RS09495;Name=murR;gbkey=Gene;gene=murR;gene_biotype=protein_coding;locus_tag=AC56_RS09495;old_locus_tag=AC56_2808
NZ_JJLS01000220.1	Protein Homology	CDS	19517	20374	.	-	0	ID=cds-WP_001400777.1;Parent=gene-AC56_RS09495;Dbxref=GenBank:WP_001400777.1;Name=WP_001400777.1;gbkey=CDS;gene=murR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311325.1;locus_tag=AC56_RS09495;product=HTH-type transcriptional regulator MurR;protein_id=WP_001400777.1;transl_table=11
NZ_JJLS01000220.1	RefSeq	gene	20538	21434	.	+	.	ID=gene-AC56_RS09490;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=AC56_RS09490;old_locus_tag=AC56_2809
NZ_JJLS01000220.1	Protein Homology	CDS	20538	21434	.	+	0	ID=cds-WP_001400778.1;Parent=gene-AC56_RS09490;Dbxref=GenBank:WP_001400778.1;Name=WP_001400778.1;Ontology_term=GO:0009254,GO:0046348,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=peptidoglycan turnover|0009254||IEA,amino sugar catabolic process|0046348||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416923.1;locus_tag=AC56_RS09490;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_001400778.1;transl_table=11
NZ_JJLS01000220.1	RefSeq	gene	21438	22862	.	+	.	ID=gene-AC56_RS09485;Name=murP;gbkey=Gene;gene=murP;gene_biotype=protein_coding;locus_tag=AC56_RS09485;old_locus_tag=AC56_2810
NZ_JJLS01000220.1	Protein Homology	CDS	21438	22862	.	+	0	ID=cds-WP_001040483.1;Parent=gene-AC56_RS09485;Dbxref=GenBank:WP_001040483.1;Name=WP_001040483.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=murP;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416924.1;locus_tag=AC56_RS09485;product=PTS N-acetylmuramic acid transporter subunit IIBC;protein_id=WP_001040483.1;transl_table=11
NZ_JJLS01000220.1	RefSeq	gene	22867	24171	.	+	.	ID=gene-AC56_RS09480;Name=pbp4b;gbkey=Gene;gene=pbp4b;gene_biotype=protein_coding;locus_tag=AC56_RS09480;old_locus_tag=AC56_2811
NZ_JJLS01000220.1	Protein Homology	CDS	22867	24171	.	+	0	ID=cds-WP_032278690.1;Parent=gene-AC56_RS09480;Dbxref=GenBank:WP_032278690.1;Name=WP_032278690.1;gbkey=CDS;gene=pbp4b;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311328.1;locus_tag=AC56_RS09480;product=penicillin binding protein PBP4B;protein_id=WP_032278690.1;transl_table=11
NZ_JJLS01000220.1	RefSeq	gene	24411	25310	.	-	.	ID=gene-AC56_RS09475;Name=yfeX;gbkey=Gene;gene=yfeX;gene_biotype=protein_coding;locus_tag=AC56_RS09475;old_locus_tag=AC56_2812
NZ_JJLS01000220.1	Protein Homology	CDS	24411	25310	.	-	0	ID=cds-WP_000084590.1;Parent=gene-AC56_RS09475;Dbxref=GenBank:WP_000084590.1;Name=WP_000084590.1;gbkey=CDS;gene=yfeX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311329.2;locus_tag=AC56_RS09475;product=porphyrinogen peroxidase;protein_id=WP_000084590.1;transl_table=11
NZ_JJLS01000220.1	RefSeq	gene	25406	25981	.	-	.	ID=gene-AC56_RS09470;Name=yfeY;gbkey=Gene;gene=yfeY;gene_biotype=protein_coding;locus_tag=AC56_RS09470;old_locus_tag=AC56_2813
NZ_JJLS01000220.1	Protein Homology	CDS	25406	25981	.	-	0	ID=cds-WP_000838937.1;Parent=gene-AC56_RS09470;Dbxref=GenBank:WP_000838937.1;Name=WP_000838937.1;gbkey=CDS;gene=yfeY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416927.1;locus_tag=AC56_RS09470;product=RpoE-regulated lipoprotein;protein_id=WP_000838937.1;transl_table=11
NZ_JJLS01000220.1	RefSeq	gene	26188	26637	.	-	.	ID=gene-AC56_RS09465;Name=yfeZ;gbkey=Gene;gene=yfeZ;gene_biotype=protein_coding;locus_tag=AC56_RS09465;old_locus_tag=AC56_2815
NZ_JJLS01000220.1	Protein Homology	CDS	26188	26637	.	-	0	ID=cds-WP_032278691.1;Parent=gene-AC56_RS09465;Dbxref=GenBank:WP_032278691.1;Name=WP_032278691.1;gbkey=CDS;gene=yfeZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311331.2;locus_tag=AC56_RS09465;product=DUF2919 domain-containing protein;protein_id=WP_032278691.1;transl_table=11
NZ_JJLS01000220.1	RefSeq	gene	26624	27049	.	-	.	ID=gene-AC56_RS09460;Name=ypeA;gbkey=Gene;gene=ypeA;gene_biotype=protein_coding;locus_tag=AC56_RS09460;old_locus_tag=AC56_2816
NZ_JJLS01000220.1	Protein Homology	CDS	26624	27049	.	-	0	ID=cds-WP_000406000.1;Parent=gene-AC56_RS09460;Dbxref=GenBank:WP_000406000.1;Name=WP_000406000.1;Ontology_term=GO:0008080;gbkey=CDS;gene=ypeA;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311332.2;locus_tag=AC56_RS09460;product=GNAT family acetyltransferase;protein_id=WP_000406000.1;transl_table=11
NZ_JJLS01000220.1	RefSeq	gene	27263	28132	.	+	.	ID=gene-AC56_RS09455;Name=amiA;gbkey=Gene;gene=amiA;gene_biotype=protein_coding;locus_tag=AC56_RS09455;old_locus_tag=AC56_2817
NZ_JJLS01000220.1	Protein Homology	CDS	27263	28132	.	+	0	ID=cds-WP_000102936.1;Parent=gene-AC56_RS09455;Dbxref=GenBank:WP_000102936.1;Name=WP_000102936.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiA;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311333.1;locus_tag=AC56_RS09455;product=N-acetylmuramoyl-L-alanine amidase AmiA;protein_id=WP_000102936.1;transl_table=11
NZ_JJLS01000220.1	RefSeq	gene	28136	29035	.	+	.	ID=gene-AC56_RS09450;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=AC56_RS09450;old_locus_tag=AC56_2818
NZ_JJLS01000220.1	Protein Homology	CDS	28136	29035	.	+	0	ID=cds-WP_000801367.1;Parent=gene-AC56_RS09450;Dbxref=GenBank:WP_000801367.1;Name=WP_000801367.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311334.1;locus_tag=AC56_RS09450;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_000801367.1;transl_table=11
NZ_JJLS01000220.1	RefSeq	gene	29041	30093	.	-	.	ID=gene-AC56_RS09445;Name=eutR;gbkey=Gene;gene=eutR;gene_biotype=protein_coding;locus_tag=AC56_RS09445;old_locus_tag=AC56_2819
NZ_JJLS01000220.1	Protein Homology	CDS	29041	30093	.	-	0	ID=cds-WP_032278693.1;Parent=gene-AC56_RS09445;Dbxref=GenBank:WP_032278693.1;Name=WP_032278693.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=eutR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311335.1;locus_tag=AC56_RS09445;product=HTH-type transcriptional regulator EutR;protein_id=WP_032278693.1;transl_table=11
NZ_JJLS01000220.1	RefSeq	gene	30139	30639	.	-	.	ID=gene-AC56_RS09440;Name=eutK;gbkey=Gene;gene=eutK;gene_biotype=protein_coding;locus_tag=AC56_RS09440;old_locus_tag=AC56_2820
NZ_JJLS01000220.1	Protein Homology	CDS	30139	30639	.	-	0	ID=cds-WP_001368253.1;Parent=gene-AC56_RS09440;Dbxref=GenBank:WP_001368253.1;Name=WP_001368253.1;gbkey=CDS;gene=eutK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416933.4;locus_tag=AC56_RS09440;product=ethanolamine utilization microcompartment protein EutK;protein_id=WP_001368253.1;transl_table=11
NZ_JJLS01000220.1	RefSeq	gene	30652	31311	.	-	.	ID=gene-AC56_RS09435;Name=eutL;gbkey=Gene;gene=eutL;gene_biotype=protein_coding;locus_tag=AC56_RS09435;old_locus_tag=AC56_2821
NZ_JJLS01000220.1	Protein Homology	CDS	30652	31311	.	-	0	ID=cds-WP_001742057.1;Parent=gene-AC56_RS09435;Dbxref=GenBank:WP_001742057.1;Name=WP_001742057.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=eutL;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416934.1;locus_tag=AC56_RS09435;product=ethanolamine utilization microcompartment protein EutL;protein_id=WP_001742057.1;transl_table=11
NZ_JJLS01000220.1	RefSeq	gene	31321	32208	.	-	.	ID=gene-AC56_RS09430;Name=eutC;gbkey=Gene;gene=eutC;gene_biotype=protein_coding;locus_tag=AC56_RS09430;old_locus_tag=AC56_2822
NZ_JJLS01000220.1	Protein Homology	CDS	31321	32208	.	-	0	ID=cds-WP_000372316.1;Parent=gene-AC56_RS09430;Dbxref=GenBank:WP_000372316.1;Name=WP_000372316.1;gbkey=CDS;gene=eutC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416935.1;locus_tag=AC56_RS09430;product=ethanolamine ammonia-lyase subunit beta;protein_id=WP_000372316.1;transl_table=11
NZ_JJLS01000220.1	RefSeq	gene	32229	33407	.	-	.	ID=gene-AC56_RS09425;Name=eutB;gbkey=Gene;gene=eutB;gene_biotype=protein_coding;locus_tag=AC56_RS09425;old_locus_tag=AC56_2823
NZ_JJLS01000220.1	Protein Homology	CDS	32229	33407	.	-	0	ID=cds-WP_077746212.1;Parent=gene-AC56_RS09425;Dbxref=GenBank:WP_077746212.1;Name=WP_077746212.1;gbkey=CDS;gene=eutB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005007704.1;locus_tag=AC56_RS09425;product=ethanolamine ammonia-lyase subunit EutB;protein_id=WP_077746212.1;transl_table=11
NZ_JJLS01000220.1	RefSeq	gene	33451	33766	.	-	.	ID=gene-AC56_RS0126660;Name=AC56_RS0126660;end_range=33766,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0126660;old_locus_tag=AC56_2824;partial=true
NZ_JJLS01000220.1	Protein Homology	CDS	33451	33766	.	-	1	ID=cds-WP_032175328.1-2;Parent=gene-AC56_RS0126660;Dbxref=GenBank:WP_032175328.1;Name=WP_032175328.1;end_range=33766,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS0126660;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032175328.1;transl_table=11
##sequence-region NZ_JJLS01000221.1 1 13600
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000221.1	RefSeq	region	1	13600	.	+	.	ID=NZ_JJLS01000221.1:1..13600;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000221.1	RefSeq	gene	1	442	.	-	.	ID=gene-AC56_RS09420;Name=AC56_RS09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS09420;old_locus_tag=AC56_2825;partial=true;start_range=.,1
NZ_JJLS01000221.1	Protein Homology	CDS	1	442	.	-	0	ID=cds-WP_032278890.1-2;Parent=gene-AC56_RS09420;Dbxref=GenBank:WP_032278890.1;Name=WP_032278890.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS09420;partial=true;product=IS5 family transposase;protein_id=WP_032278890.1;start_range=.,1;transl_table=11
NZ_JJLS01000221.1	RefSeq	pseudogene	466	1725	.	-	.	ID=gene-AC56_RS09415;Name=eutA;gbkey=Gene;gene=eutA;gene_biotype=pseudogene;locus_tag=AC56_RS09415;old_locus_tag=AC56_2826;partial=true;pseudo=true;start_range=.,466
NZ_JJLS01000221.1	Protein Homology	CDS	466	1725	.	-	0	ID=cds-AC56_RS09415;Parent=gene-AC56_RS09415;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=eutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311340.1;locus_tag=AC56_RS09415;partial=true;product=ethanolamine ammonia-lyase reactivating factor EutA;pseudo=true;start_range=.,466;transl_table=11
NZ_JJLS01000221.1	RefSeq	gene	1722	2948	.	-	.	ID=gene-AC56_RS09410;Name=eutH;gbkey=Gene;gene=eutH;gene_biotype=protein_coding;locus_tag=AC56_RS09410;old_locus_tag=AC56_2827
NZ_JJLS01000221.1	Protein Homology	CDS	1722	2948	.	-	0	ID=cds-WP_000512370.1;Parent=gene-AC56_RS09410;Dbxref=GenBank:WP_000512370.1;Name=WP_000512370.1;Ontology_term=GO:0034229,GO:0034228,GO:0016020;gbkey=CDS;gene=eutH;go_component=membrane|0016020||IEA;go_function=ethanolamine transmembrane transporter activity|0034228||IEA;go_process=ethanolamine transport|0034229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311341.1;locus_tag=AC56_RS09410;product=ethanolamine utilization protein EutH;protein_id=WP_000512370.1;transl_table=11
NZ_JJLS01000221.1	RefSeq	pseudogene	3065	4241	.	-	.	ID=gene-AC56_RS0126665;Name=eutG;gbkey=Gene;gene=eutG;gene_biotype=pseudogene;locus_tag=AC56_RS0126665;old_locus_tag=AC56_2828;pseudo=true
NZ_JJLS01000221.1	Protein Homology	CDS	3065	4241	.	-	0	ID=cds-AC56_RS0126665;Parent=gene-AC56_RS0126665;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;gene=eutG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311342.2;locus_tag=AC56_RS0126665;product=ethanolamine utilization ethanol dehydrogenase EutG;pseudo=true;transl_table=11
NZ_JJLS01000221.1	RefSeq	gene	4231	5067	.	-	.	ID=gene-AC56_RS09405;Name=eutJ;gbkey=Gene;gene=eutJ;gene_biotype=protein_coding;locus_tag=AC56_RS09405;old_locus_tag=AC56_2829
NZ_JJLS01000221.1	Protein Homology	CDS	4231	5067	.	-	0	ID=cds-WP_000929709.1;Parent=gene-AC56_RS09405;Dbxref=GenBank:WP_000929709.1;Name=WP_000929709.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=eutJ;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416949.1;locus_tag=AC56_RS09405;product=ethanolamine utilization protein EutJ;protein_id=WP_000929709.1;transl_table=11
NZ_JJLS01000221.1	RefSeq	gene	5078	6481	.	-	.	ID=gene-AC56_RS09400;Name=eutE;gbkey=Gene;gene=eutE;gene_biotype=protein_coding;locus_tag=AC56_RS09400;old_locus_tag=AC56_2830
NZ_JJLS01000221.1	Protein Homology	CDS	5078	6481	.	-	0	ID=cds-WP_001075711.1;Parent=gene-AC56_RS09400;Dbxref=GenBank:WP_001075711.1;Name=WP_001075711.1;Ontology_term=GO:0004029,GO:0008774;gbkey=CDS;gene=eutE;go_function=aldehyde dehydrogenase (NAD+) activity|0004029||IEA,acetaldehyde dehydrogenase (acetylating) activity|0008774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416950.1;locus_tag=AC56_RS09400;product=aldehyde dehydrogenase family protein;protein_id=WP_001075711.1;transl_table=11
NZ_JJLS01000221.1	RefSeq	gene	6493	6780	.	-	.	ID=gene-AC56_RS09395;Name=eutN;gbkey=Gene;gene=eutN;gene_biotype=protein_coding;locus_tag=AC56_RS09395;old_locus_tag=AC56_2831
NZ_JJLS01000221.1	Protein Homology	CDS	6493	6780	.	-	0	ID=cds-WP_000762196.1;Parent=gene-AC56_RS09395;Dbxref=GenBank:WP_000762196.1;Name=WP_000762196.1;gbkey=CDS;gene=eutN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416951.1;locus_tag=AC56_RS09395;product=ethanolamine utilization microcompartment protein EutN;protein_id=WP_000762196.1;transl_table=11
NZ_JJLS01000221.1	RefSeq	gene	6887	7180	.	-	.	ID=gene-AC56_RS09390;Name=eutM;gbkey=Gene;gene=eutM;gene_biotype=protein_coding;locus_tag=AC56_RS09390;old_locus_tag=AC56_2832
NZ_JJLS01000221.1	Protein Homology	CDS	6887	7180	.	-	0	ID=cds-WP_000387713.1;Parent=gene-AC56_RS09390;Dbxref=GenBank:WP_000387713.1;Name=WP_000387713.1;gbkey=CDS;gene=eutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416952.2;locus_tag=AC56_RS09390;product=ethanolamine utilization microcompartment protein EutM;protein_id=WP_000387713.1;transl_table=11
NZ_JJLS01000221.1	RefSeq	gene	7219	8235	.	-	.	ID=gene-AC56_RS09385;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=AC56_RS09385;old_locus_tag=AC56_2833
NZ_JJLS01000221.1	Protein Homology	CDS	7219	8235	.	-	0	ID=cds-WP_000582977.1;Parent=gene-AC56_RS09385;Dbxref=GenBank:WP_000582977.1;Name=WP_000582977.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416953.1;locus_tag=AC56_RS09385;product=phosphate acetyltransferase;protein_id=WP_000582977.1;transl_table=11
NZ_JJLS01000221.1	RefSeq	gene	8225	9034	.	-	.	ID=gene-AC56_RS09380;Name=eutT;gbkey=Gene;gene=eutT;gene_biotype=protein_coding;locus_tag=AC56_RS09380;old_locus_tag=AC56_2834
NZ_JJLS01000221.1	Protein Homology	CDS	8225	9034	.	-	0	ID=cds-WP_000651297.1;Parent=gene-AC56_RS09380;Dbxref=GenBank:WP_000651297.1;Name=WP_000651297.1;Ontology_term=GO:0006580,GO:0008817;gbkey=CDS;gene=eutT;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=ethanolamine metabolic process|0006580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001425897.1;locus_tag=AC56_RS09380;product=ethanolamine utilization cob(I)yrinic acid a%2Cc-diamide adenosyltransferase EutT;protein_id=WP_000651297.1;transl_table=11
NZ_JJLS01000221.1	RefSeq	gene	9031	9732	.	-	.	ID=gene-AC56_RS09375;Name=eutQ;gbkey=Gene;gene=eutQ;gene_biotype=protein_coding;locus_tag=AC56_RS09375;old_locus_tag=AC56_2835
NZ_JJLS01000221.1	Protein Homology	CDS	9031	9732	.	-	0	ID=cds-WP_000733916.1;Parent=gene-AC56_RS09375;Dbxref=GenBank:WP_000733916.1;Name=WP_000733916.1;gbkey=CDS;gene=eutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416955.1;locus_tag=AC56_RS09375;product=ethanolamine utilization acetate kinase EutQ;protein_id=WP_000733916.1;transl_table=11
NZ_JJLS01000221.1	RefSeq	gene	9707	10186	.	-	.	ID=gene-AC56_RS09370;Name=eutP;gbkey=Gene;gene=eutP;gene_biotype=protein_coding;locus_tag=AC56_RS09370;old_locus_tag=AC56_2836
NZ_JJLS01000221.1	Protein Homology	CDS	9707	10186	.	-	0	ID=cds-WP_000820782.1;Parent=gene-AC56_RS09370;Dbxref=GenBank:WP_000820782.1;Name=WP_000820782.1;gbkey=CDS;gene=eutP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311350.1;locus_tag=AC56_RS09370;product=ethanolamine utilization acetate kinase EutP;protein_id=WP_000820782.1;transl_table=11
NZ_JJLS01000221.1	RefSeq	gene	10199	10534	.	-	.	ID=gene-AC56_RS09365;Name=eutS;gbkey=Gene;gene=eutS;gene_biotype=protein_coding;locus_tag=AC56_RS09365;old_locus_tag=AC56_2837
NZ_JJLS01000221.1	Protein Homology	CDS	10199	10534	.	-	0	ID=cds-WP_000356956.1;Parent=gene-AC56_RS09365;Dbxref=GenBank:WP_000356956.1;Name=WP_000356956.1;gbkey=CDS;gene=eutS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311351.2;locus_tag=AC56_RS09365;product=ethanolamine utilization microcompartment protein EutS;protein_id=WP_000356956.1;transl_table=11
NZ_JJLS01000221.1	RefSeq	gene	10827	13106	.	-	.	ID=gene-AC56_RS09360;Name=maeB;gbkey=Gene;gene=maeB;gene_biotype=protein_coding;locus_tag=AC56_RS09360;old_locus_tag=AC56_2838
NZ_JJLS01000221.1	Protein Homology	CDS	10827	13106	.	-	0	ID=cds-WP_000342643.1;Parent=gene-AC56_RS09360;Dbxref=GenBank:WP_000342643.1;Name=WP_000342643.1;gbkey=CDS;gene=maeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311352.1;locus_tag=AC56_RS09360;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;protein_id=WP_000342643.1;transl_table=11
NZ_JJLS01000221.1	RefSeq	gene	13330	13600	.	-	.	ID=gene-AC56_RS09355;Name=AC56_RS09355;end_range=13600,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS09355;old_locus_tag=AC56_2839;partial=true
NZ_JJLS01000221.1	Protein Homology	CDS	13330	13600	.	-	1	ID=cds-WP_032277802.1;Parent=gene-AC56_RS09355;Dbxref=GenBank:WP_032277802.1;Name=WP_032277802.1;end_range=13600,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS09355;partial=true;product=IS4 family transposase;protein_id=WP_032277802.1;transl_table=11
##sequence-region NZ_JJLS01000222.1 1 24948
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000222.1	RefSeq	region	1	24948	.	+	.	ID=NZ_JJLS01000222.1:1..24948;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000222.1	RefSeq	pseudogene	1	389	.	-	.	ID=gene-AC56_RS09350;Name=AC56_RS09350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS09350;old_locus_tag=AC56_2840;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000222.1	Protein Homology	CDS	1	389	.	-	0	ID=cds-AC56_RS09350;Parent=gene-AC56_RS09350;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS09350;partial=true;product=IS4 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000222.1	RefSeq	pseudogene	692	1641	.	+	.	ID=gene-AC56_RS0126670;Name=tal;gbkey=Gene;gene=tal;gene_biotype=pseudogene;locus_tag=AC56_RS0126670;old_locus_tag=AC56_2841;pseudo=true
NZ_JJLS01000222.1	Protein Homology	CDS	692	1641	.	+	0	ID=cds-AC56_RS0126670;Parent=gene-AC56_RS0126670;Note=frameshifted;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311353.1;locus_tag=AC56_RS0126670;product=transaldolase;pseudo=true;transl_table=11
NZ_JJLS01000222.1	RefSeq	gene	1661	3664	.	+	.	ID=gene-AC56_RS09345;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=AC56_RS09345;old_locus_tag=AC56_2842
NZ_JJLS01000222.1	Protein Homology	CDS	1661	3664	.	+	0	ID=cds-WP_000087280.1;Parent=gene-AC56_RS09345;Dbxref=GenBank:WP_000087280.1;Name=WP_000087280.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416960.1;locus_tag=AC56_RS09345;product=transketolase;protein_id=WP_000087280.1;transl_table=11
NZ_JJLS01000222.1	RefSeq	gene	3759	4802	.	-	.	ID=gene-AC56_RS09340;Name=ypfG;gbkey=Gene;gene=ypfG;gene_biotype=protein_coding;locus_tag=AC56_RS09340;old_locus_tag=AC56_2843
NZ_JJLS01000222.1	Protein Homology	CDS	3759	4802	.	-	0	ID=cds-WP_032278708.1;Parent=gene-AC56_RS09340;Dbxref=GenBank:WP_032278708.1;Name=WP_032278708.1;gbkey=CDS;gene=ypfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416961.1;locus_tag=AC56_RS09340;product=DUF1176 domain-containing protein;protein_id=WP_032278708.1;transl_table=11
NZ_JJLS01000222.1	RefSeq	gene	4928	5503	.	-	.	ID=gene-AC56_RS09335;Name=nudK;gbkey=Gene;gene=nudK;gene_biotype=protein_coding;locus_tag=AC56_RS09335;old_locus_tag=AC56_2844
NZ_JJLS01000222.1	Protein Homology	CDS	4928	5503	.	-	0	ID=cds-WP_001544006.1;Parent=gene-AC56_RS09335;Dbxref=GenBank:WP_001544006.1;Name=WP_001544006.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;gene=nudK;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416962.1;locus_tag=AC56_RS09335;product=GDP-mannose pyrophosphatase NudK;protein_id=WP_001544006.1;transl_table=11
NZ_JJLS01000222.1	RefSeq	gene	5571	7550	.	-	.	ID=gene-AC56_RS09330;Name=aegA;gbkey=Gene;gene=aegA;gene_biotype=protein_coding;locus_tag=AC56_RS09330;old_locus_tag=AC56_2845
NZ_JJLS01000222.1	Protein Homology	CDS	5571	7550	.	-	0	ID=cds-WP_032278710.1;Parent=gene-AC56_RS09330;Dbxref=GenBank:WP_032278710.1;Name=WP_032278710.1;Ontology_term=GO:0016491;gbkey=CDS;gene=aegA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416963.1;locus_tag=AC56_RS09330;product=formate-dependent uric acid utilization protein AegA;protein_id=WP_032278710.1;transl_table=11
NZ_JJLS01000222.1	RefSeq	gene	7756	9456	.	+	.	ID=gene-AC56_RS09325;Name=narQ;gbkey=Gene;gene=narQ;gene_biotype=protein_coding;locus_tag=AC56_RS09325;old_locus_tag=AC56_2846
NZ_JJLS01000222.1	Protein Homology	CDS	7756	9456	.	+	0	ID=cds-WP_001300881.1;Parent=gene-AC56_RS09325;Dbxref=GenBank:WP_001300881.1;Name=WP_001300881.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narQ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416964.1;locus_tag=AC56_RS09325;product=nitrate/nitrite two-component system sensor histidine kinase NarQ;protein_id=WP_001300881.1;transl_table=11
NZ_JJLS01000222.1	RefSeq	gene	9620	12733	.	+	.	ID=gene-AC56_RS09320;Name=acrD;gbkey=Gene;gene=acrD;gene_biotype=protein_coding;locus_tag=AC56_RS09320;old_locus_tag=AC56_2847
NZ_JJLS01000222.1	Protein Homology	CDS	9620	12733	.	+	0	ID=cds-WP_001273115.1;Parent=gene-AC56_RS09320;Dbxref=GenBank:WP_001273115.1;Name=WP_001273115.1;Ontology_term=GO:0042908,GO:0015562;gbkey=CDS;gene=acrD;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416965.1;locus_tag=AC56_RS09320;product=multidrug efflux RND transporter permease AcrD;protein_id=WP_001273115.1;transl_table=11
NZ_JJLS01000222.1	RefSeq	gene	12832	12891	.	-	.	ID=gene-AC56_RS31470;Name=ypfM;gbkey=Gene;gene=ypfM;gene_biotype=protein_coding;locus_tag=AC56_RS31470
NZ_JJLS01000222.1	Protein Homology	CDS	12832	12891	.	-	0	ID=cds-WP_001386977.1;Parent=gene-AC56_RS31470;Dbxref=GenBank:WP_001386977.1;Name=WP_001386977.1;gbkey=CDS;gene=ypfM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165325.1;locus_tag=AC56_RS31470;product=protein YpfM;protein_id=WP_001386977.1;transl_table=11
NZ_JJLS01000222.1	RefSeq	gene	13272	13628	.	+	.	ID=gene-AC56_RS09315;Name=yffB;gbkey=Gene;gene=yffB;gene_biotype=protein_coding;locus_tag=AC56_RS09315;old_locus_tag=AC56_2848
NZ_JJLS01000222.1	Protein Homology	CDS	13272	13628	.	+	0	ID=cds-WP_000258247.1;Parent=gene-AC56_RS09315;Dbxref=GenBank:WP_000258247.1;Name=WP_000258247.1;gbkey=CDS;gene=yffB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708309.1;locus_tag=AC56_RS09315;product=ArsC family reductase;protein_id=WP_000258247.1;transl_table=11
NZ_JJLS01000222.1	RefSeq	gene	13632	14759	.	+	.	ID=gene-AC56_RS09310;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=AC56_RS09310;old_locus_tag=AC56_2849
NZ_JJLS01000222.1	Protein Homology	CDS	13632	14759	.	+	0	ID=cds-WP_001277801.1;Parent=gene-AC56_RS09310;Dbxref=GenBank:WP_001277801.1;Name=WP_001277801.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078199.1;locus_tag=AC56_RS09310;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_001277801.1;transl_table=11
NZ_JJLS01000222.1	RefSeq	gene	14787	14987	.	+	.	ID=gene-AC56_RS09305;Name=ypfN;gbkey=Gene;gene=ypfN;gene_biotype=protein_coding;locus_tag=AC56_RS09305;old_locus_tag=AC56_2850
NZ_JJLS01000222.1	Protein Homology	CDS	14787	14987	.	+	0	ID=cds-WP_000383836.1;Parent=gene-AC56_RS09305;Dbxref=GenBank:WP_000383836.1;Name=WP_000383836.1;gbkey=CDS;gene=ypfN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588465.1;locus_tag=AC56_RS09305;product=YpfN family protein;protein_id=WP_000383836.1;transl_table=11
NZ_JJLS01000222.1	RefSeq	gene	15097	15795	.	-	.	ID=gene-AC56_RS09300;Name=ypfH;gbkey=Gene;gene=ypfH;gene_biotype=protein_coding;locus_tag=AC56_RS09300;old_locus_tag=AC56_2851
NZ_JJLS01000222.1	Protein Homology	CDS	15097	15795	.	-	0	ID=cds-WP_000679812.1;Parent=gene-AC56_RS09300;Dbxref=GenBank:WP_000679812.1;Name=WP_000679812.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ypfH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311362.2;locus_tag=AC56_RS09300;product=esterase;protein_id=WP_000679812.1;transl_table=11
NZ_JJLS01000222.1	RefSeq	gene	15869	17884	.	-	.	ID=gene-AC56_RS09295;Name=tmcA;gbkey=Gene;gene=tmcA;gene_biotype=protein_coding;locus_tag=AC56_RS09295;old_locus_tag=AC56_2852
NZ_JJLS01000222.1	Protein Homology	CDS	15869	17884	.	-	0	ID=cds-WP_032282796.1;Parent=gene-AC56_RS09295;Dbxref=GenBank:WP_032282796.1;Name=WP_032282796.1;gbkey=CDS;gene=tmcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708313.1;locus_tag=AC56_RS09295;product=tRNA cytosine(34) acetyltransferase TmcA;protein_id=WP_032282796.1;transl_table=11
NZ_JJLS01000222.1	RefSeq	gene	17899	18762	.	-	.	ID=gene-AC56_RS09290;Name=ypfJ;gbkey=Gene;gene=ypfJ;gene_biotype=protein_coding;locus_tag=AC56_RS09290;old_locus_tag=AC56_2853
NZ_JJLS01000222.1	Protein Homology	CDS	17899	18762	.	-	0	ID=cds-WP_001267498.1;Parent=gene-AC56_RS09290;Dbxref=GenBank:WP_001267498.1;Name=WP_001267498.1;gbkey=CDS;gene=ypfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311364.1;locus_tag=AC56_RS09290;product=KPN_02809 family neutral zinc metallopeptidase;protein_id=WP_001267498.1;transl_table=11
NZ_JJLS01000222.1	RefSeq	gene	18930	19643	.	-	.	ID=gene-AC56_RS09285;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=AC56_RS09285;old_locus_tag=AC56_2854
NZ_JJLS01000222.1	Protein Homology	CDS	18930	19643	.	-	0	ID=cds-WP_001295467.1;Parent=gene-AC56_RS09285;Dbxref=GenBank:WP_001295467.1;Name=WP_001295467.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458944.1;locus_tag=AC56_RS09285;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_001295467.1;transl_table=11
NZ_JJLS01000222.1	RefSeq	gene	19856	20890	.	-	.	ID=gene-AC56_RS09280;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=AC56_RS09280;old_locus_tag=AC56_2855
NZ_JJLS01000222.1	Protein Homology	CDS	19856	20890	.	-	0	ID=cds-WP_001297320.1;Parent=gene-AC56_RS09280;Dbxref=GenBank:WP_001297320.1;Name=WP_001297320.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708316.2;locus_tag=AC56_RS09280;product=outer membrane protein assembly factor BamC;protein_id=WP_001297320.1;transl_table=11
NZ_JJLS01000222.1	RefSeq	gene	20907	21785	.	-	.	ID=gene-AC56_RS09275;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=AC56_RS09275;old_locus_tag=AC56_2856
NZ_JJLS01000222.1	Protein Homology	CDS	20907	21785	.	-	0	ID=cds-WP_001295469.1;Parent=gene-AC56_RS09275;Dbxref=GenBank:WP_001295469.1;Name=WP_001295469.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311023.1;locus_tag=AC56_RS09275;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_001295469.1;transl_table=11
NZ_JJLS01000222.1	RefSeq	gene	21931	22503	.	+	.	ID=gene-AC56_RS09270;Name=gcvR;gbkey=Gene;gene=gcvR;gene_biotype=protein_coding;locus_tag=AC56_RS09270;old_locus_tag=AC56_2857
NZ_JJLS01000222.1	Protein Homology	CDS	21931	22503	.	+	0	ID=cds-WP_000176187.1;Parent=gene-AC56_RS09270;Dbxref=GenBank:WP_000176187.1;Name=WP_000176187.1;gbkey=CDS;gene=gcvR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708318.1;locus_tag=AC56_RS09270;product=glycine cleavage system transcriptional repressor;protein_id=WP_000176187.1;transl_table=11
NZ_JJLS01000222.1	RefSeq	gene	22503	22973	.	+	.	ID=gene-AC56_RS09265;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=AC56_RS09265;old_locus_tag=AC56_2858
NZ_JJLS01000222.1	Protein Homology	CDS	22503	22973	.	+	0	ID=cds-WP_001068682.1;Parent=gene-AC56_RS09265;Dbxref=GenBank:WP_001068682.1;Name=WP_001068682.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311369.1;locus_tag=AC56_RS09265;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_001068682.1;transl_table=11
NZ_JJLS01000222.1	RefSeq	gene	23226	23828	.	+	.	ID=gene-AC56_RS09260;Name=hyfA;gbkey=Gene;gene=hyfA;gene_biotype=protein_coding;locus_tag=AC56_RS09260;old_locus_tag=AC56_2859
NZ_JJLS01000222.1	Protein Homology	CDS	23226	23828	.	+	0	ID=cds-WP_001300787.1;Parent=gene-AC56_RS09260;Dbxref=GenBank:WP_001300787.1;Name=WP_001300787.1;gbkey=CDS;gene=hyfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001300787.1;locus_tag=AC56_RS09260;product=hydrogenase 4 subunit HyfA;protein_id=WP_001300787.1;transl_table=11
NZ_JJLS01000222.1	RefSeq	gene	23988	24948	.	-	.	ID=gene-AC56_RS09255;Name=AC56_RS09255;end_range=24948,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS09255;old_locus_tag=AC56_2860;partial=true
NZ_JJLS01000222.1	Protein Homology	CDS	23988	24948	.	-	1	ID=cds-WP_032282478.1-13;Parent=gene-AC56_RS09255;Dbxref=GenBank:WP_032282478.1;Name=WP_032282478.1;Ontology_term=GO:0006313,GO:0004803;end_range=24948,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS09255;partial=true;product=IS4-like element IS421 family transposase;protein_id=WP_032282478.1;transl_table=11
##sequence-region NZ_JJLS01000223.1 1 28053
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000223.1	RefSeq	region	1	28053	.	+	.	ID=NZ_JJLS01000223.1:1..28053;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000223.1	RefSeq	pseudogene	1	432	.	-	.	ID=gene-AC56_RS09250;Name=AC56_RS09250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS09250;old_locus_tag=AC56_2861;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000223.1	Protein Homology	CDS	1	432	.	-	0	ID=cds-AC56_RS09250;Parent=gene-AC56_RS09250;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS09250;partial=true;product=IS4 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000223.1	RefSeq	gene	524	2542	.	+	.	ID=gene-AC56_RS09245;Name=hyfB;gbkey=Gene;gene=hyfB;gene_biotype=protein_coding;locus_tag=AC56_RS09245;old_locus_tag=AC56_2862
NZ_JJLS01000223.1	Protein Homology	CDS	524	2542	.	+	0	ID=cds-WP_000339450.1;Parent=gene-AC56_RS09245;Dbxref=GenBank:WP_000339450.1;Name=WP_000339450.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=hyfB;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311371.1;locus_tag=AC56_RS09245;product=hydrogenase 4 subunit B;protein_id=WP_000339450.1;transl_table=11
NZ_JJLS01000223.1	RefSeq	gene	2553	3500	.	+	.	ID=gene-AC56_RS09240;Name=hyfC;gbkey=Gene;gene=hyfC;gene_biotype=protein_coding;locus_tag=AC56_RS09240;old_locus_tag=AC56_2863
NZ_JJLS01000223.1	Protein Homology	CDS	2553	3500	.	+	0	ID=cds-WP_001300463.1;Parent=gene-AC56_RS09240;Dbxref=GenBank:WP_001300463.1;Name=WP_001300463.1;gbkey=CDS;gene=hyfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708321.1;locus_tag=AC56_RS09240;product=hydrogenase 4 subunit HyfC;protein_id=WP_001300463.1;transl_table=11
NZ_JJLS01000223.1	RefSeq	gene	3517	4740	.	+	.	ID=gene-AC56_RS09235;Name=AC56_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS09235;old_locus_tag=AC56_2864
NZ_JJLS01000223.1	Protein Homology	CDS	3517	4740	.	+	0	ID=cds-WP_032278722.1;Parent=gene-AC56_RS09235;Dbxref=GenBank:WP_032278722.1;Name=WP_032278722.1;Ontology_term=GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416979.1;locus_tag=AC56_RS09235;product=hydrogenase 4 subunit D;protein_id=WP_032278722.1;transl_table=11
NZ_JJLS01000223.1	RefSeq	gene	4752	5402	.	+	.	ID=gene-AC56_RS09230;Name=hyfE;gbkey=Gene;gene=hyfE;gene_biotype=protein_coding;locus_tag=AC56_RS09230;old_locus_tag=AC56_2865
NZ_JJLS01000223.1	Protein Homology	CDS	4752	5402	.	+	0	ID=cds-WP_000148113.1;Parent=gene-AC56_RS09230;Dbxref=GenBank:WP_000148113.1;Name=WP_000148113.1;gbkey=CDS;gene=hyfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311374.1;locus_tag=AC56_RS09230;product=hydrogenase 4 membrane subunit;protein_id=WP_000148113.1;transl_table=11
NZ_JJLS01000223.1	RefSeq	pseudogene	5407	6987	.	+	.	ID=gene-AC56_RS33355;Name=hyfF;gbkey=Gene;gene=hyfF;gene_biotype=pseudogene;locus_tag=AC56_RS33355;pseudo=true
NZ_JJLS01000223.1	Protein Homology	CDS	5407	6987	.	+	0	ID=cds-AC56_RS33355;Parent=gene-AC56_RS33355;Note=internal stop;gbkey=CDS;gene=hyfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708324.1;locus_tag=AC56_RS33355;product=hydrogenase 4 subunit F;pseudo=true;transl_table=11
NZ_JJLS01000223.1	RefSeq	gene	6977	8644	.	+	.	ID=gene-AC56_RS09215;Name=hyfG;gbkey=Gene;gene=hyfG;gene_biotype=protein_coding;locus_tag=AC56_RS09215;old_locus_tag=AC56_2868
NZ_JJLS01000223.1	Protein Homology	CDS	6977	8644	.	+	0	ID=cds-WP_032278724.1;Parent=gene-AC56_RS09215;Dbxref=GenBank:WP_032278724.1;Name=WP_032278724.1;gbkey=CDS;gene=hyfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416982.1;locus_tag=AC56_RS09215;product=hydrogenase 4 catalytic subunit HyfG;protein_id=WP_032278724.1;transl_table=11
NZ_JJLS01000223.1	RefSeq	gene	8654	9193	.	+	.	ID=gene-AC56_RS09210;Name=hyfH;gbkey=Gene;gene=hyfH;gene_biotype=protein_coding;locus_tag=AC56_RS09210;old_locus_tag=AC56_2869
NZ_JJLS01000223.1	Protein Homology	CDS	8654	9193	.	+	0	ID=cds-WP_000916085.1;Parent=gene-AC56_RS09210;Dbxref=GenBank:WP_000916085.1;Name=WP_000916085.1;gbkey=CDS;gene=hyfH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416983.1;locus_tag=AC56_RS09210;product=hydrogenase 4 subunit H;protein_id=WP_000916085.1;transl_table=11
NZ_JJLS01000223.1	RefSeq	gene	9190	9948	.	+	.	ID=gene-AC56_RS09205;Name=hyfI;gbkey=Gene;gene=hyfI;gene_biotype=protein_coding;locus_tag=AC56_RS09205;old_locus_tag=AC56_2870
NZ_JJLS01000223.1	Protein Homology	CDS	9190	9948	.	+	0	ID=cds-WP_032278726.1;Parent=gene-AC56_RS09205;Dbxref=GenBank:WP_032278726.1;Name=WP_032278726.1;gbkey=CDS;gene=hyfI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416984.1;locus_tag=AC56_RS09205;product=hydrogenase 4 catalytic subunit HyfI;protein_id=WP_032278726.1;transl_table=11
NZ_JJLS01000223.1	RefSeq	gene	9941	10354	.	+	.	ID=gene-AC56_RS09200;Name=hyfJ;gbkey=Gene;gene=hyfJ;gene_biotype=protein_coding;locus_tag=AC56_RS09200;old_locus_tag=AC56_2871
NZ_JJLS01000223.1	Protein Homology	CDS	9941	10354	.	+	0	ID=cds-WP_000133937.1;Parent=gene-AC56_RS09200;Dbxref=GenBank:WP_000133937.1;Name=WP_000133937.1;gbkey=CDS;gene=hyfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416985.4;locus_tag=AC56_RS09200;product=hydrogenase 4 assembly chaperone HyfJ;protein_id=WP_000133937.1;transl_table=11
NZ_JJLS01000223.1	RefSeq	gene	10384	12396	.	+	.	ID=gene-AC56_RS09195;Name=hyfR;gbkey=Gene;gene=hyfR;gene_biotype=protein_coding;locus_tag=AC56_RS09195;old_locus_tag=AC56_2872
NZ_JJLS01000223.1	Protein Homology	CDS	10384	12396	.	+	0	ID=cds-WP_001251530.1;Parent=gene-AC56_RS09195;Dbxref=GenBank:WP_001251530.1;Name=WP_001251530.1;gbkey=CDS;gene=hyfR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416986.4;locus_tag=AC56_RS09195;product=DNA-binding transcriptional regulator HyfR;protein_id=WP_001251530.1;transl_table=11
NZ_JJLS01000223.1	RefSeq	gene	12418	13266	.	+	.	ID=gene-AC56_RS09190;Name=focB;gbkey=Gene;gene=focB;gene_biotype=protein_coding;locus_tag=AC56_RS09190;old_locus_tag=AC56_2873
NZ_JJLS01000223.1	Protein Homology	CDS	12418	13266	.	+	0	ID=cds-WP_032278727.1;Parent=gene-AC56_RS09190;Dbxref=GenBank:WP_032278727.1;Name=WP_032278727.1;gbkey=CDS;gene=focB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311381.1;locus_tag=AC56_RS09190;product=formate transporter FocB;protein_id=WP_032278727.1;transl_table=11
NZ_JJLS01000223.1	RefSeq	gene	13304	14365	.	-	.	ID=gene-AC56_RS09185;Name=yfgO;gbkey=Gene;gene=yfgO;gene_biotype=protein_coding;locus_tag=AC56_RS09185;old_locus_tag=AC56_2874
NZ_JJLS01000223.1	Protein Homology	CDS	13304	14365	.	-	0	ID=cds-WP_000892044.1;Parent=gene-AC56_RS09185;Dbxref=GenBank:WP_000892044.1;Name=WP_000892044.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=yfgO;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311382.1;locus_tag=AC56_RS09185;product=AI-2E family transporter;protein_id=WP_000892044.1;transl_table=11
NZ_JJLS01000223.1	RefSeq	gene	14578	16041	.	+	.	ID=gene-AC56_RS09180;Name=bepA;gbkey=Gene;gene=bepA;gene_biotype=protein_coding;locus_tag=AC56_RS09180;old_locus_tag=AC56_2875
NZ_JJLS01000223.1	Protein Homology	CDS	14578	16041	.	+	0	ID=cds-WP_032278729.1;Parent=gene-AC56_RS09180;Dbxref=GenBank:WP_032278729.1;Name=WP_032278729.1;gbkey=CDS;gene=bepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416989.1;locus_tag=AC56_RS09180;product=beta-barrel assembly-enhancing protease;protein_id=WP_032278729.1;transl_table=11
NZ_JJLS01000223.1	RefSeq	gene	16062	16421	.	+	.	ID=gene-AC56_RS09175;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=AC56_RS09175;old_locus_tag=AC56_2876
NZ_JJLS01000223.1	Protein Homology	CDS	16062	16421	.	+	0	ID=cds-WP_001479457.1;Parent=gene-AC56_RS09175;Dbxref=GenBank:WP_001479457.1;Name=WP_001479457.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0046685,GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311384.1;locus_tag=AC56_RS09175;product=arsenate reductase (glutaredoxin);protein_id=WP_001479457.1;transl_table=11
NZ_JJLS01000223.1	RefSeq	gene	16559	17260	.	-	.	ID=gene-AC56_RS09170;Name=hda;gbkey=Gene;gene=hda;gene_biotype=protein_coding;locus_tag=AC56_RS09170;old_locus_tag=AC56_2877
NZ_JJLS01000223.1	Protein Homology	CDS	16559	17260	.	-	0	ID=cds-WP_001307333.1;Parent=gene-AC56_RS09170;Dbxref=GenBank:WP_001307333.1;Name=WP_001307333.1;gbkey=CDS;gene=hda;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416991.2;locus_tag=AC56_RS09170;product=DnaA inactivator Hda;protein_id=WP_001307333.1;transl_table=11
NZ_JJLS01000223.1	RefSeq	gene	17355	18644	.	-	.	ID=gene-AC56_RS09165;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=AC56_RS09165;old_locus_tag=AC56_2878
NZ_JJLS01000223.1	Protein Homology	CDS	17355	18644	.	-	0	ID=cds-WP_000198328.1;Parent=gene-AC56_RS09165;Dbxref=GenBank:WP_000198328.1;Name=WP_000198328.1;Ontology_term=GO:0022857;gbkey=CDS;gene=uraA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311386.1;locus_tag=AC56_RS09165;product=uracil permease;protein_id=WP_000198328.1;transl_table=11
NZ_JJLS01000223.1	RefSeq	gene	18730	19356	.	-	.	ID=gene-AC56_RS09160;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=AC56_RS09160;old_locus_tag=AC56_2879
NZ_JJLS01000223.1	Protein Homology	CDS	18730	19356	.	-	0	ID=cds-WP_001295473.1;Parent=gene-AC56_RS09160;Dbxref=GenBank:WP_001295473.1;Name=WP_001295473.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=AC56_RS09160;product=uracil phosphoribosyltransferase;protein_id=WP_001295473.1;transl_table=11
NZ_JJLS01000223.1	RefSeq	gene	19681	20718	.	+	.	ID=gene-AC56_RS09155;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=AC56_RS09155;old_locus_tag=AC56_2881
NZ_JJLS01000223.1	Protein Homology	CDS	19681	20718	.	+	0	ID=cds-WP_001295474.1;Parent=gene-AC56_RS09155;Dbxref=GenBank:WP_001295474.1;Name=WP_001295474.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311388.1;locus_tag=AC56_RS09155;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_001295474.1;transl_table=11
NZ_JJLS01000223.1	RefSeq	gene	20718	21356	.	+	.	ID=gene-AC56_RS09150;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=AC56_RS09150;old_locus_tag=AC56_2882
NZ_JJLS01000223.1	Protein Homology	CDS	20718	21356	.	+	0	ID=cds-WP_001028614.1;Parent=gene-AC56_RS09150;Dbxref=GenBank:WP_001028614.1;Name=WP_001028614.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708338.1;locus_tag=AC56_RS09150;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_001028614.1;transl_table=11
NZ_JJLS01000223.1	RefSeq	gene	21527	23593	.	+	.	ID=gene-AC56_RS09145;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=AC56_RS09145;old_locus_tag=AC56_2884
NZ_JJLS01000223.1	Protein Homology	CDS	21527	23593	.	+	0	ID=cds-WP_001394601.1;Parent=gene-AC56_RS09145;Dbxref=GenBank:WP_001394601.1;Name=WP_001394601.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311390.1;locus_tag=AC56_RS09145;product=polyphosphate kinase 1;protein_id=WP_001394601.1;transl_table=11
NZ_JJLS01000223.1	RefSeq	gene	23598	25139	.	+	.	ID=gene-AC56_RS09140;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=AC56_RS09140;old_locus_tag=AC56_2885
NZ_JJLS01000223.1	Protein Homology	CDS	23598	25139	.	+	0	ID=cds-WP_001121363.1;Parent=gene-AC56_RS09140;Dbxref=GenBank:WP_001121363.1;Name=WP_001121363.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311391.1;locus_tag=AC56_RS09140;product=exopolyphosphatase;protein_id=WP_001121363.1;transl_table=11
NZ_JJLS01000223.1	RefSeq	gene	25178	27421	.	-	.	ID=gene-AC56_RS09135;Name=pdeF;gbkey=Gene;gene=pdeF;gene_biotype=protein_coding;locus_tag=AC56_RS09135;old_locus_tag=AC56_2886
NZ_JJLS01000223.1	Protein Homology	CDS	25178	27421	.	-	0	ID=cds-WP_000772732.1;Parent=gene-AC56_RS09135;Dbxref=GenBank:WP_000772732.1;Name=WP_000772732.1;gbkey=CDS;gene=pdeF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416998.1;locus_tag=AC56_RS09135;product=cyclic-guanylate-specific phosphodiesterase PdeF;protein_id=WP_000772732.1;transl_table=11
NZ_JJLS01000223.1	RefSeq	pseudogene	27581	28053	.	+	.	ID=gene-AC56_RS31485;Name=AC56_RS31485;end_range=28053,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS31485;partial=true;pseudo=true
NZ_JJLS01000223.1	Protein Homology	CDS	27581	28053	.	+	0	ID=cds-AC56_RS31485;Parent=gene-AC56_RS31485;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;end_range=28053,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS31485;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000224.1 1 11554
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000224.1	RefSeq	region	1	11554	.	+	.	ID=NZ_JJLS01000224.1:1..11554;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000224.1	RefSeq	gene	1	431	.	+	.	ID=gene-AC56_RS09125;Name=AC56_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS09125;old_locus_tag=AC56_2888;partial=true;start_range=.,1
NZ_JJLS01000224.1	Protein Homology	CDS	1	431	.	+	2	ID=cds-WP_000315021.1-2;Parent=gene-AC56_RS09125;Dbxref=GenBank:WP_000315021.1;Name=WP_000315021.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS09125;partial=true;product=IS1 family transposase;protein_id=WP_000315021.1;start_range=.,1;transl_table=11
NZ_JJLS01000224.1	RefSeq	gene	508	1536	.	+	.	ID=gene-AC56_RS09120;Name=AC56_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS09120;old_locus_tag=AC56_2889
NZ_JJLS01000224.1	GeneMarkS-2+	CDS	508	1536	.	+	0	ID=cds-WP_050439861.1;Parent=gene-AC56_RS09120;Dbxref=GenBank:WP_050439861.1;Name=WP_050439861.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS09120;product=ATP-binding protein;protein_id=WP_050439861.1;transl_table=11
NZ_JJLS01000224.1	RefSeq	pseudogene	1984	2214	.	-	.	ID=gene-AC56_RS29910;Name=AC56_RS29910;end_range=2214,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS29910;partial=true;pseudo=true
NZ_JJLS01000224.1	Protein Homology	CDS	1984	2214	.	-	0	ID=cds-AC56_RS29910;Parent=gene-AC56_RS29910;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0005524,GO:0016893,GO:0046872;end_range=2214,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,endonuclease activity%2C active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters|0016893||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611501.1;locus_tag=AC56_RS29910;partial=true;product=integrase core domain-containing protein;pseudo=true;transl_table=11
NZ_JJLS01000224.1	RefSeq	gene	2264	3376	.	-	.	ID=gene-AC56_RS09115;Name=AC56_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS09115;old_locus_tag=AC56_2891
NZ_JJLS01000224.1	GeneMarkS-2+	CDS	2264	3376	.	-	0	ID=cds-WP_032278739.1;Parent=gene-AC56_RS09115;Dbxref=GenBank:WP_032278739.1;Name=WP_032278739.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS09115;product=hypothetical protein;protein_id=WP_032278739.1;transl_table=11
NZ_JJLS01000224.1	RefSeq	gene	3376	4656	.	-	.	ID=gene-AC56_RS09110;Name=AC56_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS09110;old_locus_tag=AC56_2892
NZ_JJLS01000224.1	GeneMarkS-2+	CDS	3376	4656	.	-	0	ID=cds-WP_032278740.1;Parent=gene-AC56_RS09110;Dbxref=GenBank:WP_032278740.1;Name=WP_032278740.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS09110;product=hypothetical protein;protein_id=WP_032278740.1;transl_table=11
NZ_JJLS01000224.1	RefSeq	gene	4837	6033	.	-	.	ID=gene-AC56_RS09105;Name=AC56_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS09105;old_locus_tag=AC56_2893
NZ_JJLS01000224.1	Protein Homology	CDS	4837	6033	.	-	0	ID=cds-WP_032278741.1;Parent=gene-AC56_RS09105;Dbxref=GenBank:WP_032278741.1;Name=WP_032278741.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009307877.1;locus_tag=AC56_RS09105;product=tyrosine-type recombinase/integrase;protein_id=WP_032278741.1;transl_table=11
NZ_JJLS01000224.1	RefSeq	gene	6197	6308	.	-	.	ID=gene-AC56_RS32790;Name=AC56_RS32790;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS32790
NZ_JJLS01000224.1	tRNAscan-SE	tRNA	6197	6308	.	-	.	ID=rna-AC56_RS32790;Parent=gene-AC56_RS32790;anticodon=(pos:complement(6215..6217));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS32790;product=tRNA-Ser
NZ_JJLS01000224.1	tRNAscan-SE	exon	6197	6308	.	-	.	ID=exon-AC56_RS32790-1;Parent=rna-AC56_RS32790;anticodon=(pos:complement(6215..6217));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS32790;product=tRNA-Ser
NZ_JJLS01000224.1	RefSeq	gene	6334	7407	.	+	.	ID=gene-AC56_RS09100;Name=AC56_RS09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS09100;old_locus_tag=AC56_2894
NZ_JJLS01000224.1	Protein Homology	CDS	6334	7407	.	+	0	ID=cds-WP_001396517.1;Parent=gene-AC56_RS09100;Dbxref=GenBank:WP_001396517.1;Name=WP_001396517.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016239453.1;locus_tag=AC56_RS09100;product=site-specific integrase;protein_id=WP_001396517.1;transl_table=11
NZ_JJLS01000224.1	RefSeq	gene	7417	8307	.	+	.	ID=gene-AC56_RS09095;Name=AC56_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS09095;old_locus_tag=AC56_2895
NZ_JJLS01000224.1	Protein Homology	CDS	7417	8307	.	+	0	ID=cds-WP_001471079.1;Parent=gene-AC56_RS09095;Dbxref=GenBank:WP_001471079.1;Name=WP_001471079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395310.1;locus_tag=AC56_RS09095;product=hypothetical protein;protein_id=WP_001471079.1;transl_table=11
NZ_JJLS01000224.1	RefSeq	gene	8294	8521	.	+	.	ID=gene-AC56_RS09090;Name=AC56_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS09090;old_locus_tag=AC56_2896
NZ_JJLS01000224.1	Protein Homology	CDS	8294	8521	.	+	0	ID=cds-WP_001471080.1;Parent=gene-AC56_RS09090;Dbxref=GenBank:WP_001471080.1;Name=WP_001471080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965727.1;locus_tag=AC56_RS09090;product=antitoxin VbhA family protein;protein_id=WP_001471080.1;transl_table=11
NZ_JJLS01000224.1	RefSeq	gene	8543	8755	.	-	.	ID=gene-AC56_RS09085;Name=AC56_RS09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS09085;old_locus_tag=AC56_2897
NZ_JJLS01000224.1	Protein Homology	CDS	8543	8755	.	-	0	ID=cds-WP_032278745.1;Parent=gene-AC56_RS09085;Dbxref=GenBank:WP_032278745.1;Name=WP_032278745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000796434.1;locus_tag=AC56_RS09085;product=hypothetical protein;protein_id=WP_032278745.1;transl_table=11
NZ_JJLS01000224.1	RefSeq	gene	8825	10219	.	-	.	ID=gene-AC56_RS09080;Name=trbL;gbkey=Gene;gene=trbL;gene_biotype=protein_coding;locus_tag=AC56_RS09080;old_locus_tag=AC56_2898
NZ_JJLS01000224.1	Protein Homology	CDS	8825	10219	.	-	0	ID=cds-WP_032282799.1;Parent=gene-AC56_RS09080;Dbxref=GenBank:WP_032282799.1;Name=WP_032282799.1;Ontology_term=GO:0009291;gbkey=CDS;gene=trbL;go_process=unidirectional conjugation|0009291||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001471082.1;locus_tag=AC56_RS09080;product=P-type conjugative transfer protein TrbL;protein_id=WP_032282799.1;transl_table=11
NZ_JJLS01000224.1	RefSeq	gene	10222	10395	.	-	.	ID=gene-AC56_RS32990;Name=AC56_RS32990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS32990
NZ_JJLS01000224.1	Protein Homology	CDS	10222	10395	.	-	0	ID=cds-WP_001575473.1;Parent=gene-AC56_RS32990;Dbxref=GenBank:WP_001575473.1;Name=WP_001575473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965741.1;locus_tag=AC56_RS32990;product=hypothetical protein;protein_id=WP_001575473.1;transl_table=11
NZ_JJLS01000224.1	RefSeq	pseudogene	10407	11099	.	-	.	ID=gene-AC56_RS09075;Name=trbJ;end_range=11099,.;gbkey=Gene;gene=trbJ;gene_biotype=pseudogene;locus_tag=AC56_RS09075;old_locus_tag=AC56_2899;partial=true;pseudo=true
NZ_JJLS01000224.1	Protein Homology	CDS	10407	11099	.	-	0	ID=cds-AC56_RS09075;Parent=gene-AC56_RS09075;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=11099,.;gbkey=CDS;gene=trbJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001403507.1;locus_tag=AC56_RS09075;partial=true;product=P-type conjugative transfer protein TrbJ;pseudo=true;transl_table=11
NZ_JJLS01000224.1	RefSeq	gene	11128	11554	.	+	.	ID=gene-AC56_RS09070;Name=AC56_RS09070;end_range=11554,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS09070;old_locus_tag=AC56_2900;partial=true
NZ_JJLS01000224.1	Protein Homology	CDS	11128	11554	.	+	0	ID=cds-WP_032282800.1;Parent=gene-AC56_RS09070;Dbxref=GenBank:WP_032282800.1;Name=WP_032282800.1;Ontology_term=GO:0004803;end_range=11554,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS09070;partial=true;product=IS5 family transposase;protein_id=WP_032282800.1;transl_table=11
##sequence-region NZ_JJLS01000225.1 1 2630
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000225.1	RefSeq	region	1	2630	.	+	.	ID=NZ_JJLS01000225.1:1..2630;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000225.1	RefSeq	gene	1	426	.	-	.	ID=gene-AC56_RS09065;Name=AC56_RS09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS09065;old_locus_tag=AC56_2901;partial=true;start_range=.,1
NZ_JJLS01000225.1	Protein Homology	CDS	1	426	.	-	0	ID=cds-WP_032278442.1-2;Parent=gene-AC56_RS09065;Dbxref=GenBank:WP_032278442.1;Name=WP_032278442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_047234906.1;locus_tag=AC56_RS09065;partial=true;product=helix-turn-helix domain-containing protein;protein_id=WP_032278442.1;start_range=.,1;transl_table=11
NZ_JJLS01000225.1	RefSeq	pseudogene	494	796	.	-	.	ID=gene-AC56_RS09060;Name=AC56_RS09060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS09060;old_locus_tag=AC56_2902;partial=true;pseudo=true;start_range=.,494
NZ_JJLS01000225.1	Protein Homology	CDS	494	796	.	-	0	ID=cds-AC56_RS09060;Parent=gene-AC56_RS09060;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612262.1;locus_tag=AC56_RS09060;partial=true;product=transposase;pseudo=true;start_range=.,494;transl_table=11
NZ_JJLS01000225.1	RefSeq	pseudogene	839	1033	.	+	.	ID=gene-AC56_RS29915;Name=AC56_RS29915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS29915;old_locus_tag=AC56_2903;partial=true;pseudo=true;start_range=.,839
NZ_JJLS01000225.1	Protein Homology	CDS	839	1033	.	+	0	ID=cds-AC56_RS29915;Parent=gene-AC56_RS29915;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245840.1;locus_tag=AC56_RS29915;partial=true;product=L-threonine dehydrogenase;pseudo=true;start_range=.,839;transl_table=11
NZ_JJLS01000225.1	RefSeq	gene	1188	1922	.	-	.	ID=gene-AC56_RS09055;Name=AC56_RS09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS09055;old_locus_tag=AC56_2904
NZ_JJLS01000225.1	Protein Homology	CDS	1188	1922	.	-	0	ID=cds-WP_032277626.1;Parent=gene-AC56_RS09055;Dbxref=GenBank:WP_032277626.1;Name=WP_032277626.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000578338.1;locus_tag=AC56_RS09055;product=helix-turn-helix domain-containing protein;protein_id=WP_032277626.1;transl_table=11
NZ_JJLS01000225.1	RefSeq	gene	2012	2326	.	+	.	ID=gene-AC56_RS09050;Name=AC56_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS09050;old_locus_tag=AC56_2905
NZ_JJLS01000225.1	Protein Homology	CDS	2012	2326	.	+	0	ID=cds-WP_032277624.1;Parent=gene-AC56_RS09050;Dbxref=GenBank:WP_032277624.1;Name=WP_032277624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627058.1;locus_tag=AC56_RS09050;product=PerC family transcriptional regulator;protein_id=WP_032277624.1;transl_table=11
NZ_JJLS01000225.1	RefSeq	pseudogene	2355	2630	.	+	.	ID=gene-AC56_RS09045;Name=AC56_RS09045;end_range=2630,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS09045;old_locus_tag=AC56_2906;partial=true;pseudo=true
NZ_JJLS01000225.1	Protein Homology	CDS	2355	2630	.	+	0	ID=cds-AC56_RS09045;Parent=gene-AC56_RS09045;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=2630,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS09045;partial=true;product=IS1-like element transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000226.1 1 7278
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000226.1	RefSeq	region	1	7278	.	+	.	ID=NZ_JJLS01000226.1:1..7278;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000226.1	RefSeq	pseudogene	1	1082	.	-	.	ID=gene-AC56_RS09040;Name=AC56_RS09040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS09040;old_locus_tag=AC56_2907;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000226.1	Protein Homology	CDS	1	1082	.	-	0	ID=cds-AC56_RS09040;Parent=gene-AC56_RS09040;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611465.1;locus_tag=AC56_RS09040;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000226.1	cmsearch	sequence_feature	685	801	.	-	.	ID=id-AC56_RS09040;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS09040;pseudo=true
NZ_JJLS01000226.1	RefSeq	gene	1088	1735	.	-	.	ID=gene-AC56_RS09030;Name=AC56_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS09030;old_locus_tag=AC56_2909
NZ_JJLS01000226.1	Protein Homology	CDS	1088	1735	.	-	0	ID=cds-WP_050439717.1;Parent=gene-AC56_RS09030;Dbxref=GenBank:WP_050439717.1;Name=WP_050439717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000973210.1;locus_tag=AC56_RS09030;product=reverse transcriptase domain-containing protein;protein_id=WP_050439717.1;transl_table=11
NZ_JJLS01000226.1	RefSeq	gene	2479	4629	.	-	.	ID=gene-AC56_RS09025;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=AC56_RS09025;old_locus_tag=AC56_2910
NZ_JJLS01000226.1	Protein Homology	CDS	2479	4629	.	-	0	ID=cds-WP_032278519.1;Parent=gene-AC56_RS09025;Dbxref=GenBank:WP_032278519.1;Name=WP_032278519.1;Ontology_term=GO:0006011,GO:0030244,GO:0016020;gbkey=CDS;gene=bcsB;go_component=membrane|0016020||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001351999.1;locus_tag=AC56_RS09025;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WP_032278519.1;transl_table=11
NZ_JJLS01000226.1	RefSeq	gene	4693	6798	.	-	.	ID=gene-AC56_RS09020;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=AC56_RS09020;old_locus_tag=AC56_2911
NZ_JJLS01000226.1	Protein Homology	CDS	4693	6798	.	-	0	ID=cds-WP_001352000.1;Parent=gene-AC56_RS09020;Dbxref=GenBank:WP_001352000.1;Name=WP_001352000.1;Ontology_term=GO:0006011,GO:0030244,GO:0016760,GO:0035438,GO:0016020;gbkey=CDS;gene=bcsA;go_component=membrane|0016020||IEA;go_function=cellulose synthase (UDP-forming) activity|0016760||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001352000.1;locus_tag=AC56_RS09020;product=UDP-forming cellulose synthase catalytic subunit;protein_id=WP_001352000.1;transl_table=11
NZ_JJLS01000226.1	RefSeq	pseudogene	6879	7278	.	+	.	ID=gene-AC56_RS0126685;Name=AC56_RS0126685;end_range=7278,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0126685;partial=true;pseudo=true
NZ_JJLS01000226.1	Protein Homology	CDS	6879	7278	.	+	0	ID=cds-AC56_RS0126685;Parent=gene-AC56_RS0126685;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=7278,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS0126685;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000227.1 1 2795
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000227.1	RefSeq	region	1	2795	.	+	.	ID=NZ_JJLS01000227.1:1..2795;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000227.1	RefSeq	gene	1	396	.	+	.	ID=gene-AC56_RS09015;Name=AC56_RS09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS09015;old_locus_tag=AC56_2913;partial=true;start_range=.,1
NZ_JJLS01000227.1	Protein Homology	CDS	1	396	.	+	0	ID=cds-WP_032282618.1-3;Parent=gene-AC56_RS09015;Dbxref=GenBank:WP_032282618.1;Name=WP_032282618.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS09015;partial=true;product=IS1 family transposase;protein_id=WP_032282618.1;start_range=.,1;transl_table=11
NZ_JJLS01000227.1	RefSeq	pseudogene	412	637	.	+	.	ID=gene-AC56_RS0126690;Name=AC56_RS0126690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0126690;partial=true;pseudo=true;start_range=.,412
NZ_JJLS01000227.1	Protein Homology	CDS	412	637	.	+	0	ID=cds-AC56_RS0126690;Parent=gene-AC56_RS0126690;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312737.1;locus_tag=AC56_RS0126690;partial=true;product=type II toxin-antitoxin system PemK/MazF family toxin;pseudo=true;start_range=.,412;transl_table=11
NZ_JJLS01000227.1	RefSeq	gene	836	1117	.	+	.	ID=gene-AC56_RS09010;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=AC56_RS09010;old_locus_tag=AC56_2914
NZ_JJLS01000227.1	Protein Homology	CDS	836	1117	.	+	0	ID=cds-WP_021525051.1;Parent=gene-AC56_RS09010;Dbxref=GenBank:WP_021525051.1;Name=WP_021525051.1;gbkey=CDS;gene=ppiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004097481.1;locus_tag=AC56_RS09010;product=peptidylprolyl isomerase PpiC;protein_id=WP_021525051.1;transl_table=11
NZ_JJLS01000227.1	RefSeq	gene	1204	2679	.	-	.	ID=gene-AC56_RS09005;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=AC56_RS09005;old_locus_tag=AC56_2915
NZ_JJLS01000227.1	Protein Homology	CDS	1204	2679	.	-	0	ID=cds-WP_000024939.1-2;Parent=gene-AC56_RS09005;Dbxref=GenBank:WP_000024939.1;Name=WP_000024939.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=AC56_RS09005;product=ketol-acid reductoisomerase;protein_id=WP_000024939.1;transl_table=11
##sequence-region NZ_JJLS01000228.1 1 846
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000228.1	RefSeq	region	1	846	.	+	.	ID=NZ_JJLS01000228.1:1..846;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000228.1	RefSeq	pseudogene	1	276	.	-	.	ID=gene-AC56_RS09000;Name=AC56_RS09000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS09000;old_locus_tag=AC56_2916;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000228.1	Protein Homology	CDS	1	276	.	-	0	ID=cds-AC56_RS09000;Parent=gene-AC56_RS09000;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS09000;partial=true;product=IS4 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000228.1	RefSeq	gene	611	846	.	-	.	ID=gene-AC56_RS08990;Name=AC56_RS08990;end_range=846,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS08990;old_locus_tag=AC56_2918;partial=true
NZ_JJLS01000228.1	Protein Homology	CDS	611	846	.	-	2	ID=cds-WP_032282803.1;Parent=gene-AC56_RS08990;Dbxref=GenBank:WP_032282803.1;Name=WP_032282803.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=846,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS08990;partial=true;product=IS1 family transposase;protein_id=WP_032282803.1;transl_table=11
##sequence-region NZ_JJLS01000229.1 1 48042
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000229.1	RefSeq	region	1	48042	.	+	.	ID=NZ_JJLS01000229.1:1..48042;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000229.1	RefSeq	pseudogene	1	448	.	-	.	ID=gene-AC56_RS08985;Name=AC56_RS08985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS08985;old_locus_tag=AC56_2919;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000229.1	Protein Homology	CDS	1	448	.	-	0	ID=cds-AC56_RS08985;Parent=gene-AC56_RS08985;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS08985;partial=true;product=IS4-like element IS421 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000229.1	RefSeq	pseudogene	506	1612	.	-	.	ID=gene-AC56_RS08980;Name=AC56_RS08980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS08980;old_locus_tag=AC56_2920;partial=true;pseudo=true;start_range=.,506
NZ_JJLS01000229.1	Protein Homology	CDS	506	1612	.	-	0	ID=cds-AC56_RS08980;Parent=gene-AC56_RS08980;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417044.4;locus_tag=AC56_RS08980;partial=true;product=DUF5107 domain-containing protein;pseudo=true;start_range=.,506;transl_table=11
NZ_JJLS01000229.1	RefSeq	gene	1730	2923	.	+	.	ID=gene-AC56_RS08975;Name=yphH;gbkey=Gene;gene=yphH;gene_biotype=protein_coding;locus_tag=AC56_RS08975;old_locus_tag=AC56_2921
NZ_JJLS01000229.1	Protein Homology	CDS	1730	2923	.	+	0	ID=cds-WP_001200766.1;Parent=gene-AC56_RS08975;Dbxref=GenBank:WP_001200766.1;Name=WP_001200766.1;gbkey=CDS;gene=yphH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417045.4;locus_tag=AC56_RS08975;product=ROK family protein;protein_id=WP_001200766.1;transl_table=11
NZ_JJLS01000229.1	RefSeq	gene	3121	4374	.	-	.	ID=gene-AC56_RS08970;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=AC56_RS08970;old_locus_tag=AC56_2922
NZ_JJLS01000229.1	Protein Homology	CDS	3121	4374	.	-	0	ID=cds-WP_000919159.1;Parent=gene-AC56_RS08970;Dbxref=GenBank:WP_000919159.1;Name=WP_000919159.1;gbkey=CDS;gene=glyA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=AC56_RS08970;product=serine hydroxymethyltransferase;protein_id=WP_000919159.1;transl_table=11
NZ_JJLS01000229.1	RefSeq	gene	4702	5892	.	+	.	ID=gene-AC56_RS08965;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=AC56_RS08965;old_locus_tag=AC56_2923
NZ_JJLS01000229.1	Protein Homology	CDS	4702	5892	.	+	0	ID=cds-WP_000883122.1;Parent=gene-AC56_RS08965;Dbxref=GenBank:WP_000883122.1;Name=WP_000883122.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase NAD(P)H activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417047.1;locus_tag=AC56_RS08965;product=NO-inducible flavohemoprotein;protein_id=WP_000883122.1;transl_table=11
NZ_JJLS01000229.1	RefSeq	gene	5937	6275	.	-	.	ID=gene-AC56_RS08960;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=AC56_RS08960;old_locus_tag=AC56_2924
NZ_JJLS01000229.1	Protein Homology	CDS	5937	6275	.	-	0	ID=cds-WP_000717694.1;Parent=gene-AC56_RS08960;Dbxref=GenBank:WP_000717694.1;Name=WP_000717694.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373484.1;locus_tag=AC56_RS08960;product=nitrogen regulatory protein P-II;protein_id=WP_000717694.1;transl_table=11
NZ_JJLS01000229.1	RefSeq	gene	6336	7670	.	-	.	ID=gene-AC56_RS08955;Name=glrR;gbkey=Gene;gene=glrR;gene_biotype=protein_coding;locus_tag=AC56_RS08955;old_locus_tag=AC56_2925
NZ_JJLS01000229.1	Protein Homology	CDS	6336	7670	.	-	0	ID=cds-WP_001295369.1;Parent=gene-AC56_RS08955;Dbxref=GenBank:WP_001295369.1;Name=WP_001295369.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=glrR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311447.1;locus_tag=AC56_RS08955;product=two-component system response regulator GlrR;protein_id=WP_001295369.1;transl_table=11
NZ_JJLS01000229.1	RefSeq	gene	7660	8373	.	-	.	ID=gene-AC56_RS08950;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=protein_coding;locus_tag=AC56_RS08950;old_locus_tag=AC56_2926
NZ_JJLS01000229.1	Protein Homology	CDS	7660	8373	.	-	0	ID=cds-WP_001215861.1;Parent=gene-AC56_RS08950;Dbxref=GenBank:WP_001215861.1;Name=WP_001215861.1;gbkey=CDS;gene=qseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311448.1;locus_tag=AC56_RS08950;product=two-component system QseEF-associated lipoprotein QseG;protein_id=WP_001215861.1;transl_table=11
NZ_JJLS01000229.1	RefSeq	gene	8538	9965	.	-	.	ID=gene-AC56_RS08945;Name=qseE;gbkey=Gene;gene=qseE;gene_biotype=protein_coding;locus_tag=AC56_RS08945;old_locus_tag=AC56_2927
NZ_JJLS01000229.1	Protein Homology	CDS	8538	9965	.	-	0	ID=cds-WP_001311037.1;Parent=gene-AC56_RS08945;Dbxref=GenBank:WP_001311037.1;Name=WP_001311037.1;gbkey=CDS;gene=qseE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417051.2;locus_tag=AC56_RS08945;product=two component system sensor histidine kinase QseE/GlrK;protein_id=WP_001311037.1;transl_table=11
NZ_JJLS01000229.1	RefSeq	gene	10523	14410	.	-	.	ID=gene-AC56_RS08940;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=AC56_RS08940;old_locus_tag=AC56_2928
NZ_JJLS01000229.1	Protein Homology	CDS	10523	14410	.	-	0	ID=cds-WP_032278786.1;Parent=gene-AC56_RS08940;Dbxref=GenBank:WP_032278786.1;Name=WP_032278786.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026170.1;locus_tag=AC56_RS08940;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_032278786.1;transl_table=11
NZ_JJLS01000229.1	RefSeq	gene	14668	16224	.	+	.	ID=gene-AC56_RS08935;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=AC56_RS08935;old_locus_tag=AC56_2929
NZ_JJLS01000229.1	Protein Homology	CDS	14668	16224	.	+	0	ID=cds-WP_032278787.1;Parent=gene-AC56_RS08935;Dbxref=GenBank:WP_032278787.1;Name=WP_032278787.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltF;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417053.2;locus_tag=AC56_RS08935;product=membrane-bound lytic murein transglycosylase MltF;protein_id=WP_032278787.1;transl_table=11
NZ_JJLS01000229.1	RefSeq	gene	16221	16724	.	-	.	ID=gene-AC56_RS08930;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=AC56_RS08930;old_locus_tag=AC56_2930
NZ_JJLS01000229.1	Protein Homology	CDS	16221	16724	.	-	0	ID=cds-WP_001297409.1;Parent=gene-AC56_RS08930;Dbxref=GenBank:WP_001297409.1;Name=WP_001297409.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417054.2;locus_tag=AC56_RS08930;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_001297409.1;transl_table=11
NZ_JJLS01000229.1	RefSeq	gene	16782	17417	.	-	.	ID=gene-AC56_RS08925;Name=yfhb;gbkey=Gene;gene=yfhb;gene_biotype=protein_coding;locus_tag=AC56_RS08925;old_locus_tag=AC56_2931
NZ_JJLS01000229.1	Protein Homology	CDS	16782	17417	.	-	0	ID=cds-WP_000190655.1;Parent=gene-AC56_RS08925;Dbxref=GenBank:WP_000190655.1;Name=WP_000190655.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhb;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417055.4;locus_tag=AC56_RS08925;product=phosphatidylglycerophosphatase C;protein_id=WP_000190655.1;transl_table=11
NZ_JJLS01000229.1	RefSeq	gene	17626	18474	.	+	.	ID=gene-AC56_RS08920;Name=yfhH;gbkey=Gene;gene=yfhH;gene_biotype=protein_coding;locus_tag=AC56_RS08920;old_locus_tag=AC56_2932
NZ_JJLS01000229.1	Protein Homology	CDS	17626	18474	.	+	0	ID=cds-WP_001013779.1;Parent=gene-AC56_RS08920;Dbxref=GenBank:WP_001013779.1;Name=WP_001013779.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yfhH;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417056.2;locus_tag=AC56_RS08920;product=MurR/RpiR family transcriptional regulator;protein_id=WP_001013779.1;transl_table=11
NZ_JJLS01000229.1	RefSeq	gene	18530	18790	.	+	.	ID=gene-AC56_RS0126695;Name=yfhL;gbkey=Gene;gene=yfhL;gene_biotype=protein_coding;locus_tag=AC56_RS0126695;old_locus_tag=AC56_2933
NZ_JJLS01000229.1	Protein Homology	CDS	18530	18790	.	+	0	ID=cds-WP_001196283.1;Parent=gene-AC56_RS0126695;Dbxref=GenBank:WP_001196283.1;Name=WP_001196283.1;gbkey=CDS;gene=yfhL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417057.1;locus_tag=AC56_RS0126695;product=4Fe-4S dicluster ferredoxin YfhL;protein_id=WP_001196283.1;transl_table=11
NZ_JJLS01000229.1	RefSeq	gene	18984	19064	.	-	.	ID=gene-AC56_RS0126700;Name=shoB;gbkey=Gene;gene=shoB;gene_biotype=protein_coding;locus_tag=AC56_RS0126700
NZ_JJLS01000229.1	Protein Homology	CDS	18984	19064	.	-	0	ID=cds-WP_000128776.1;Parent=gene-AC56_RS0126700;Dbxref=GenBank:WP_000128776.1;Name=WP_000128776.1;gbkey=CDS;gene=shoB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791251.1;locus_tag=AC56_RS0126700;product=type I toxin-antitoxin system toxin ShoB;protein_id=WP_000128776.1;transl_table=11
NZ_JJLS01000229.1	RefSeq	gene	19485	19865	.	-	.	ID=gene-AC56_RS08915;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=AC56_RS08915;old_locus_tag=AC56_2934
NZ_JJLS01000229.1	Protein Homology	CDS	19485	19865	.	-	0	ID=cds-WP_000986023.1;Parent=gene-AC56_RS08915;Dbxref=GenBank:WP_000986023.1;Name=WP_000986023.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417058.1;locus_tag=AC56_RS08915;product=holo-ACP synthase;protein_id=WP_000986023.1;transl_table=11
NZ_JJLS01000229.1	RefSeq	gene	19865	20596	.	-	.	ID=gene-AC56_RS08910;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=AC56_RS08910;old_locus_tag=AC56_2935
NZ_JJLS01000229.1	Protein Homology	CDS	19865	20596	.	-	0	ID=cds-WP_001297412.1;Parent=gene-AC56_RS08910;Dbxref=GenBank:WP_001297412.1;Name=WP_001297412.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311457.1;locus_tag=AC56_RS08910;product=pyridoxine 5'-phosphate synthase;protein_id=WP_001297412.1;transl_table=11
NZ_JJLS01000229.1	RefSeq	gene	20608	21336	.	-	.	ID=gene-AC56_RS08905;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=AC56_RS08905;old_locus_tag=AC56_2936
NZ_JJLS01000229.1	Protein Homology	CDS	20608	21336	.	-	0	ID=cds-WP_001742065.1;Parent=gene-AC56_RS08905;Dbxref=GenBank:WP_001742065.1;Name=WP_001742065.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311458.1;locus_tag=AC56_RS08905;product=DNA repair protein RecO;protein_id=WP_001742065.1;transl_table=11
NZ_JJLS01000229.1	RefSeq	gene	21348	22253	.	-	.	ID=gene-AC56_RS08900;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=AC56_RS08900;old_locus_tag=AC56_2937
NZ_JJLS01000229.1	Protein Homology	CDS	21348	22253	.	-	0	ID=cds-WP_000020749.1;Parent=gene-AC56_RS08900;Dbxref=GenBank:WP_000020749.1;Name=WP_000020749.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417061.1;locus_tag=AC56_RS08900;product=GTPase Era;protein_id=WP_000020749.1;transl_table=11
NZ_JJLS01000229.1	RefSeq	gene	22250	22930	.	-	.	ID=gene-AC56_RS08895;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=AC56_RS08895;old_locus_tag=AC56_2938
NZ_JJLS01000229.1	Protein Homology	CDS	22250	22930	.	-	0	ID=cds-WP_001068343.1;Parent=gene-AC56_RS08895;Dbxref=GenBank:WP_001068343.1;Name=WP_001068343.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960048.1;locus_tag=AC56_RS08895;product=ribonuclease III;protein_id=WP_001068343.1;transl_table=11
NZ_JJLS01000229.1	RefSeq	gene	23202	24176	.	-	.	ID=gene-AC56_RS08890;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=AC56_RS08890;old_locus_tag=AC56_2939
NZ_JJLS01000229.1	Protein Homology	CDS	23202	24176	.	-	0	ID=cds-WP_032278791.1;Parent=gene-AC56_RS08890;Dbxref=GenBank:WP_032278791.1;Name=WP_032278791.1;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417063.1;locus_tag=AC56_RS08890;product=signal peptidase I;protein_id=WP_032278791.1;transl_table=11
NZ_JJLS01000229.1	RefSeq	gene	24192	25991	.	-	.	ID=gene-AC56_RS08885;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=AC56_RS08885;old_locus_tag=AC56_2940
NZ_JJLS01000229.1	Protein Homology	CDS	24192	25991	.	-	0	ID=cds-WP_000790168.1;Parent=gene-AC56_RS08885;Dbxref=GenBank:WP_000790168.1;Name=WP_000790168.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311462.1;locus_tag=AC56_RS08885;product=translation elongation factor 4;protein_id=WP_000790168.1;transl_table=11
NZ_JJLS01000229.1	RefSeq	gene	26189	26668	.	-	.	ID=gene-AC56_RS08880;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=AC56_RS08880;old_locus_tag=AC56_2941
NZ_JJLS01000229.1	Protein Homology	CDS	26189	26668	.	-	0	ID=cds-WP_000589068.1;Parent=gene-AC56_RS08880;Dbxref=GenBank:WP_000589068.1;Name=WP_000589068.1;gbkey=CDS;gene=rseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417065.1;locus_tag=AC56_RS08880;product=SoxR-reducing system protein RseC;protein_id=WP_000589068.1;transl_table=11
NZ_JJLS01000229.1	RefSeq	gene	26665	27621	.	-	.	ID=gene-AC56_RS08875;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=AC56_RS08875;old_locus_tag=AC56_2942
NZ_JJLS01000229.1	Protein Homology	CDS	26665	27621	.	-	0	ID=cds-WP_000812053.1;Parent=gene-AC56_RS08875;Dbxref=GenBank:WP_000812053.1;Name=WP_000812053.1;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311464.1;locus_tag=AC56_RS08875;product=sigma-E factor regulatory protein RseB;protein_id=WP_000812053.1;transl_table=11
NZ_JJLS01000229.1	RefSeq	gene	27621	28271	.	-	.	ID=gene-AC56_RS08870;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=AC56_RS08870;old_locus_tag=AC56_2943
NZ_JJLS01000229.1	Protein Homology	CDS	27621	28271	.	-	0	ID=cds-WP_001168459.1;Parent=gene-AC56_RS08870;Dbxref=GenBank:WP_001168459.1;Name=WP_001168459.1;Ontology_term=GO:0016989;gbkey=CDS;gene=rseA;go_function=sigma factor antagonist activity|0016989||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417067.1;locus_tag=AC56_RS08870;product=anti-sigma-E factor RseA;protein_id=WP_001168459.1;transl_table=11
NZ_JJLS01000229.1	RefSeq	gene	28304	28879	.	-	.	ID=gene-AC56_RS08865;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=AC56_RS08865;old_locus_tag=AC56_2944
NZ_JJLS01000229.1	Protein Homology	CDS	28304	28879	.	-	0	ID=cds-WP_001295364.1;Parent=gene-AC56_RS08865;Dbxref=GenBank:WP_001295364.1;Name=WP_001295364.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoE;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005070454.1;locus_tag=AC56_RS08865;product=RNA polymerase sigma factor RpoE;protein_id=WP_001295364.1;transl_table=11
NZ_JJLS01000229.1	RefSeq	gene	28876	29031	.	-	.	ID=gene-AC56_RS32795;Name=rseD;gbkey=Gene;gene=rseD;gene_biotype=protein_coding;locus_tag=AC56_RS32795
NZ_JJLS01000229.1	Protein Homology	CDS	28876	29031	.	-	0	ID=cds-WP_001303621.1;Parent=gene-AC56_RS32795;Dbxref=GenBank:WP_001303621.1;Name=WP_001303621.1;gbkey=CDS;gene=rseD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518806.1;locus_tag=AC56_RS32795;product=rpoE leader peptide RseD;protein_id=WP_001303621.1;transl_table=11
NZ_JJLS01000229.1	RefSeq	gene	29287	30909	.	+	.	ID=gene-AC56_RS08860;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=AC56_RS08860;old_locus_tag=AC56_2945
NZ_JJLS01000229.1	Protein Homology	CDS	29287	30909	.	+	0	ID=cds-WP_001094484.1;Parent=gene-AC56_RS08860;Dbxref=GenBank:WP_001094484.1;Name=WP_001094484.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311467.1;locus_tag=AC56_RS08860;product=L-aspartate oxidase;protein_id=WP_001094484.1;transl_table=11
NZ_JJLS01000229.1	RefSeq	gene	30894	31631	.	-	.	ID=gene-AC56_RS08855;Name=trmN;gbkey=Gene;gene=trmN;gene_biotype=protein_coding;locus_tag=AC56_RS08855;old_locus_tag=AC56_2946
NZ_JJLS01000229.1	Protein Homology	CDS	30894	31631	.	-	0	ID=cds-WP_001295363.1;Parent=gene-AC56_RS08855;Dbxref=GenBank:WP_001295363.1;Name=WP_001295363.1;Ontology_term=GO:0030488,GO:0003676,GO:0016430;gbkey=CDS;gene=trmN;go_function=nucleic acid binding|0003676||IEA,tRNA (adenine-N6)-methyltransferase activity|0016430||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417070.2;locus_tag=AC56_RS08855;product=tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN;protein_id=WP_001295363.1;transl_table=11
NZ_JJLS01000229.1	RefSeq	gene	31763	33097	.	+	.	ID=gene-AC56_RS08850;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=AC56_RS08850;old_locus_tag=AC56_2947
NZ_JJLS01000229.1	Protein Homology	CDS	31763	33097	.	+	0	ID=cds-WP_000219193.1;Parent=gene-AC56_RS08850;Dbxref=GenBank:WP_000219193.1;Name=WP_000219193.1;Ontology_term=GO:0000027,GO:0003724;gbkey=CDS;gene=srmB;go_function=RNA helicase activity|0003724||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311469.1;locus_tag=AC56_RS08850;product=ATP-dependent RNA helicase SrmB;protein_id=WP_000219193.1;transl_table=11
NZ_JJLS01000229.1	RefSeq	gene	33306	34187	.	-	.	ID=gene-AC56_RS08845;Name=yfiE;gbkey=Gene;gene=yfiE;gene_biotype=protein_coding;locus_tag=AC56_RS08845;old_locus_tag=AC56_2948
NZ_JJLS01000229.1	Protein Homology	CDS	33306	34187	.	-	0	ID=cds-WP_001300638.1;Parent=gene-AC56_RS08845;Dbxref=GenBank:WP_001300638.1;Name=WP_001300638.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=yfiE;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417072.4;locus_tag=AC56_RS08845;product=LysR family transcriptional regulator;protein_id=WP_001300638.1;transl_table=11
NZ_JJLS01000229.1	RefSeq	gene	34290	34877	.	+	.	ID=gene-AC56_RS08840;Name=eamB;gbkey=Gene;gene=eamB;gene_biotype=protein_coding;locus_tag=AC56_RS08840;old_locus_tag=AC56_2949
NZ_JJLS01000229.1	Protein Homology	CDS	34290	34877	.	+	0	ID=cds-WP_000189207.1;Parent=gene-AC56_RS08840;Dbxref=GenBank:WP_000189207.1;Name=WP_000189207.1;gbkey=CDS;gene=eamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417073.1;locus_tag=AC56_RS08840;product=cysteine/O-acetylserine transporter;protein_id=WP_000189207.1;transl_table=11
NZ_JJLS01000229.1	RefSeq	gene	34933	35316	.	-	.	ID=gene-AC56_RS08835;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=AC56_RS08835;old_locus_tag=AC56_2950
NZ_JJLS01000229.1	Protein Homology	CDS	34933	35316	.	-	0	ID=cds-WP_000627807.1;Parent=gene-AC56_RS08835;Dbxref=GenBank:WP_000627807.1;Name=WP_000627807.1;Ontology_term=GO:0003824;gbkey=CDS;gene=grcA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1;locus_tag=AC56_RS08835;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_000627807.1;transl_table=11
NZ_JJLS01000229.1	RefSeq	gene	35621	36310	.	+	.	ID=gene-AC56_RS08830;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=AC56_RS08830;old_locus_tag=AC56_2951
NZ_JJLS01000229.1	Protein Homology	CDS	35621	36310	.	+	0	ID=cds-WP_001262713.1;Parent=gene-AC56_RS08830;Dbxref=GenBank:WP_001262713.1;Name=WP_001262713.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417075.1;locus_tag=AC56_RS08830;product=uracil-DNA glycosylase;protein_id=WP_001262713.1;transl_table=11
NZ_JJLS01000229.1	RefSeq	gene	36358	37395	.	-	.	ID=gene-AC56_RS08825;Name=yfiF;gbkey=Gene;gene=yfiF;gene_biotype=protein_coding;locus_tag=AC56_RS08825;old_locus_tag=AC56_2952
NZ_JJLS01000229.1	Protein Homology	CDS	36358	37395	.	-	0	ID=cds-WP_000997403.1;Parent=gene-AC56_RS08825;Dbxref=GenBank:WP_000997403.1;Name=WP_000997403.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=yfiF;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311474.1;locus_tag=AC56_RS08825;product=tRNA/rRNA methyltransferase;protein_id=WP_000997403.1;transl_table=11
NZ_JJLS01000229.1	RefSeq	gene	37602	38021	.	+	.	ID=gene-AC56_RS08820;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;locus_tag=AC56_RS08820;old_locus_tag=AC56_2953
NZ_JJLS01000229.1	Protein Homology	CDS	37602	38021	.	+	0	ID=cds-WP_001098726.1;Parent=gene-AC56_RS08820;Dbxref=GenBank:WP_001098726.1;Name=WP_001098726.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxC;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311475.1;locus_tag=AC56_RS08820;product=thioredoxin TrxC;protein_id=WP_001098726.1;transl_table=11
NZ_JJLS01000229.1	RefSeq	gene	38090	38788	.	+	.	ID=gene-AC56_RS08815;Name=tapT;gbkey=Gene;gene=tapT;gene_biotype=protein_coding;gene_synonym=tuaA,yfiP;locus_tag=AC56_RS08815;old_locus_tag=AC56_2954
NZ_JJLS01000229.1	Protein Homology	CDS	38090	38788	.	+	0	ID=cds-WP_001300438.1;Parent=gene-AC56_RS08815;Dbxref=GenBank:WP_001300438.1;Name=WP_001300438.1;gbkey=CDS;gene=tapT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417078.4;locus_tag=AC56_RS08815;product=tRNA-uridine aminocarboxypropyltransferase;protein_id=WP_001300438.1;transl_table=11
NZ_JJLS01000229.1	RefSeq	gene	38820	41480	.	+	.	ID=gene-AC56_RS08810;Name=patZ;gbkey=Gene;gene=patZ;gene_biotype=protein_coding;locus_tag=AC56_RS08810;old_locus_tag=AC56_2955
NZ_JJLS01000229.1	Protein Homology	CDS	38820	41480	.	+	0	ID=cds-WP_000083005.1;Parent=gene-AC56_RS08810;Dbxref=GenBank:WP_000083005.1;Name=WP_000083005.1;gbkey=CDS;gene=patZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417079.1;locus_tag=AC56_RS08810;product=peptidyl-lysine N-acetyltransferase PatZ;protein_id=WP_000083005.1;transl_table=11
NZ_JJLS01000229.1	RefSeq	gene	41594	42949	.	+	.	ID=gene-AC56_RS08805;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=AC56_RS08805;old_locus_tag=AC56_2956
NZ_JJLS01000229.1	Protein Homology	CDS	41594	42949	.	+	0	ID=cds-WP_000949265.1;Parent=gene-AC56_RS08805;Dbxref=GenBank:WP_000949265.1;Name=WP_000949265.1;Ontology_term=GO:0032049,GO:0008444;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121216.1;locus_tag=AC56_RS08805;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_000949265.1;transl_table=11
NZ_JJLS01000229.1	RefSeq	gene	42995	43318	.	+	.	ID=gene-AC56_RS08800;Name=yfiM;gbkey=Gene;gene=yfiM;gene_biotype=protein_coding;locus_tag=AC56_RS08800;old_locus_tag=AC56_2957
NZ_JJLS01000229.1	Protein Homology	CDS	42995	43318	.	+	0	ID=cds-WP_001300818.1;Parent=gene-AC56_RS08800;Dbxref=GenBank:WP_001300818.1;Name=WP_001300818.1;gbkey=CDS;gene=yfiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417081.2;locus_tag=AC56_RS08800;product=YfiM family lipoprotein;protein_id=WP_001300818.1;transl_table=11
NZ_JJLS01000229.1	RefSeq	gene	43315	44613	.	-	.	ID=gene-AC56_RS08795;Name=kgtP;gbkey=Gene;gene=kgtP;gene_biotype=protein_coding;locus_tag=AC56_RS08795;old_locus_tag=AC56_2958
NZ_JJLS01000229.1	Protein Homology	CDS	43315	44613	.	-	0	ID=cds-WP_000841103.1;Parent=gene-AC56_RS08795;Dbxref=GenBank:WP_000841103.1;Name=WP_000841103.1;gbkey=CDS;gene=kgtP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417082.1;locus_tag=AC56_RS08795;product=alpha-ketoglutarate permease;protein_id=WP_000841103.1;transl_table=11
NZ_JJLS01000229.1	RefSeq	gene	44939	45054	.	-	.	ID=gene-AC56_RS08790;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AC56_RS08790;old_locus_tag=AC56_2959
NZ_JJLS01000229.1	cmsearch	rRNA	44939	45054	.	-	.	ID=rna-AC56_RS08790;Parent=gene-AC56_RS08790;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS08790;product=5S ribosomal RNA
NZ_JJLS01000229.1	cmsearch	exon	44939	45054	.	-	.	ID=exon-AC56_RS08790-1;Parent=rna-AC56_RS08790;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS08790;product=5S ribosomal RNA
NZ_JJLS01000229.1	RefSeq	gene	45150	48042	.	-	.	ID=gene-AC56_RS08785;Name=AC56_RS08785;end_range=48042,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC56_RS08785;old_locus_tag=AC56_2960;partial=true
NZ_JJLS01000229.1	cmsearch	rRNA	45150	48042	.	-	.	ID=rna-AC56_RS08785;Parent=gene-AC56_RS08785;Dbxref=RFAM:RF02541;end_range=48042,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS08785;partial=true;product=23S ribosomal RNA
NZ_JJLS01000229.1	cmsearch	exon	45150	48042	.	-	.	ID=exon-AC56_RS08785-1;Parent=rna-AC56_RS08785;Dbxref=RFAM:RF02541;end_range=48042,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS08785;partial=true;product=23S ribosomal RNA
##sequence-region NZ_JJLS01000230.1 1 6851
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000230.1	RefSeq	region	1	6851	.	+	.	ID=NZ_JJLS01000230.1:1..6851;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000230.1	RefSeq	gene	1	385	.	+	.	ID=gene-AC56_RS08780;Name=AC56_RS08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS08780;old_locus_tag=AC56_2963;partial=true;start_range=.,1
NZ_JJLS01000230.1	Protein Homology	CDS	1	385	.	+	1	ID=cds-WP_024206598.1-3;Parent=gene-AC56_RS08780;Dbxref=GenBank:WP_024206598.1;Name=WP_024206598.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AC56_RS08780;partial=true;product=IS3 family transposase;protein_id=WP_024206598.1;start_range=.,1;transl_table=11
NZ_JJLS01000230.1	RefSeq	pseudogene	418	492	.	-	.	ID=gene-AC56_RS33365;Name=AC56_RS33365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33365;partial=true;pseudo=true;start_range=.,418
NZ_JJLS01000230.1	Protein Homology	CDS	418	492	.	-	0	ID=cds-AC56_RS33365;Parent=gene-AC56_RS33365;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224844.1;locus_tag=AC56_RS33365;partial=true;product=hypothetical protein;pseudo=true;start_range=.,418;transl_table=11
NZ_JJLS01000230.1	RefSeq	gene	645	1748	.	-	.	ID=gene-AC56_RS08775;Name=zorE;gbkey=Gene;gene=zorE;gene_biotype=protein_coding;locus_tag=AC56_RS08775;old_locus_tag=AC56_2964
NZ_JJLS01000230.1	Protein Homology	CDS	645	1748	.	-	0	ID=cds-WP_000777276.1;Parent=gene-AC56_RS08775;Dbxref=GenBank:WP_000777276.1;Name=WP_000777276.1;Ontology_term=GO:0051607;gbkey=CDS;gene=zorE;go_process=defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313283.1;locus_tag=AC56_RS08775;product=type II Zorya anti-phage system protein ZorE;protein_id=WP_000777276.1;transl_table=11
NZ_JJLS01000230.1	RefSeq	gene	1752	2459	.	-	.	ID=gene-AC56_RS08770;Name=zorB2;gbkey=Gene;gene=zorB2;gene_biotype=protein_coding;locus_tag=AC56_RS08770;old_locus_tag=AC56_2965
NZ_JJLS01000230.1	Protein Homology	CDS	1752	2459	.	-	0	ID=cds-WP_000357807.1;Parent=gene-AC56_RS08770;Dbxref=GenBank:WP_000357807.1;Name=WP_000357807.1;Ontology_term=GO:0051607;gbkey=CDS;gene=zorB2;go_process=defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313284.1;locus_tag=AC56_RS08770;product=type II Zorya anti-phage system protein ZorB2;protein_id=WP_000357807.1;transl_table=11
NZ_JJLS01000230.1	RefSeq	gene	2466	4118	.	-	.	ID=gene-AC56_RS08765;Name=zorA2;gbkey=Gene;gene=zorA2;gene_biotype=protein_coding;locus_tag=AC56_RS08765;old_locus_tag=AC56_2966
NZ_JJLS01000230.1	Protein Homology	CDS	2466	4118	.	-	0	ID=cds-WP_000880884.1;Parent=gene-AC56_RS08765;Dbxref=GenBank:WP_000880884.1;Name=WP_000880884.1;Ontology_term=GO:0051607;gbkey=CDS;gene=zorA2;go_process=defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313285.1;locus_tag=AC56_RS08765;product=type II Zorya anti-phage system protein ZorA2;protein_id=WP_000880884.1;transl_table=11
NZ_JJLS01000230.1	RefSeq	pseudogene	4330	6384	.	+	.	ID=gene-AC56_RS0126735;Name=AC56_RS0126735;end_range=6384,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0126735;old_locus_tag=AC56_2967;partial=true;pseudo=true
NZ_JJLS01000230.1	Protein Homology	CDS	4330	6384	.	+	0	ID=cds-AC56_RS0126735;Parent=gene-AC56_RS0126735;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=6384,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313286.2;locus_tag=AC56_RS0126735;partial=true;product=STY4851/ECs_5259 family protein;pseudo=true;transl_table=11
NZ_JJLS01000230.1	RefSeq	pseudogene	6440	6851	.	+	.	ID=gene-AC56_RS0126740;Name=AC56_RS0126740;end_range=6851,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0126740;partial=true;pseudo=true
NZ_JJLS01000230.1	Protein Homology	CDS	6440	6851	.	+	0	ID=cds-AC56_RS0126740;Parent=gene-AC56_RS0126740;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=6851,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS0126740;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000231.1 1 28172
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000231.1	RefSeq	region	1	28172	.	+	.	ID=NZ_JJLS01000231.1:1..28172;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000231.1	RefSeq	gene	1	1489	.	-	.	ID=gene-AC56_RS0126745;Name=AC56_RS0126745;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC56_RS0126745;partial=true;start_range=.,1
NZ_JJLS01000231.1	cmsearch	rRNA	1	1489	.	-	.	ID=rna-AC56_RS0126745;Parent=gene-AC56_RS0126745;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS0126745;partial=true;product=16S ribosomal RNA;start_range=.,1
NZ_JJLS01000231.1	cmsearch	exon	1	1489	.	-	.	ID=exon-AC56_RS0126745-1;Parent=rna-AC56_RS0126745;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS0126745;partial=true;product=16S ribosomal RNA;start_range=.,1
NZ_JJLS01000231.1	RefSeq	gene	1932	4505	.	-	.	ID=gene-AC56_RS08760;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=AC56_RS08760;old_locus_tag=AC56_2970
NZ_JJLS01000231.1	Protein Homology	CDS	1932	4505	.	-	0	ID=cds-WP_001235102.1;Parent=gene-AC56_RS08760;Dbxref=GenBank:WP_001235102.1;Name=WP_001235102.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=AC56_RS08760;product=ATP-dependent chaperone ClpB;protein_id=WP_001235102.1;transl_table=11
NZ_JJLS01000231.1	RefSeq	gene	4635	5366	.	-	.	ID=gene-AC56_RS08755;Name=yfiH;gbkey=Gene;gene=yfiH;gene_biotype=protein_coding;locus_tag=AC56_RS08755;old_locus_tag=AC56_2971
NZ_JJLS01000231.1	Protein Homology	CDS	4635	5366	.	-	0	ID=cds-WP_000040169.1;Parent=gene-AC56_RS08755;Dbxref=GenBank:WP_000040169.1;Name=WP_000040169.1;Ontology_term=GO:0004000,GO:0004731,GO:0042803;gbkey=CDS;gene=yfiH;go_function=adenosine deaminase activity|0004000||IEA,purine-nucleoside phosphorylase activity|0004731||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417084.1;locus_tag=AC56_RS08755;product=purine nucleoside phosphorylase YfiH;protein_id=WP_000040169.1;transl_table=11
NZ_JJLS01000231.1	RefSeq	gene	5363	6343	.	-	.	ID=gene-AC56_RS08750;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=AC56_RS08750;old_locus_tag=AC56_2972
NZ_JJLS01000231.1	Protein Homology	CDS	5363	6343	.	-	0	ID=cds-WP_000079100.1;Parent=gene-AC56_RS08750;Dbxref=GenBank:WP_000079100.1;Name=WP_000079100.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383977.1;locus_tag=AC56_RS08750;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_000079100.1;transl_table=11
NZ_JJLS01000231.1	RefSeq	gene	6478	7215	.	+	.	ID=gene-AC56_RS08745;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=AC56_RS08745;old_locus_tag=AC56_2973
NZ_JJLS01000231.1	Protein Homology	CDS	6478	7215	.	+	0	ID=cds-WP_000197686.1;Parent=gene-AC56_RS08745;Dbxref=GenBank:WP_000197686.1;Name=WP_000197686.1;gbkey=CDS;gene=bamD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311485.1;locus_tag=AC56_RS08745;product=outer membrane protein assembly factor BamD;protein_id=WP_000197686.1;transl_table=11
NZ_JJLS01000231.1	RefSeq	gene	7486	7827	.	+	.	ID=gene-AC56_RS08740;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=AC56_RS08740;old_locus_tag=AC56_2974
NZ_JJLS01000231.1	Protein Homology	CDS	7486	7827	.	+	0	ID=cds-WP_000178456.1;Parent=gene-AC56_RS08740;Dbxref=GenBank:WP_000178456.1;Name=WP_000178456.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311487.1;locus_tag=AC56_RS08740;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_000178456.1;transl_table=11
NZ_JJLS01000231.1	cmsearch	sequence_feature	7930	8055	.	+	.	ID=id-NZ_JJLS01000231.1:7930..8055;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5
NZ_JJLS01000231.1	RefSeq	gene	7931	7978	.	+	.	ID=gene-AC56_RS32265;Name=pheL;gbkey=Gene;gene=pheL;gene_biotype=protein_coding;locus_tag=AC56_RS32265
NZ_JJLS01000231.1	Protein Homology	CDS	7931	7978	.	+	0	ID=cds-WP_010723158.1;Parent=gene-AC56_RS32265;Dbxref=GenBank:WP_010723158.1;Name=WP_010723158.1;gbkey=CDS;gene=pheL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417089.1;locus_tag=AC56_RS32265;product=phe operon leader peptide;protein_id=WP_010723158.1;transl_table=11
NZ_JJLS01000231.1	RefSeq	gene	8077	9237	.	+	.	ID=gene-AC56_RS08735;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=AC56_RS08735;old_locus_tag=AC56_2975
NZ_JJLS01000231.1	Protein Homology	CDS	8077	9237	.	+	0	ID=cds-WP_000200120.1;Parent=gene-AC56_RS08735;Dbxref=GenBank:WP_000200120.1;Name=WP_000200120.1;Ontology_term=GO:0009094,GO:0046417,GO:0004106,GO:0004664;gbkey=CDS;gene=pheA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311489.1;locus_tag=AC56_RS08735;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=WP_000200120.1;transl_table=11
NZ_JJLS01000231.1	RefSeq	gene	9280	10401	.	-	.	ID=gene-AC56_RS08730;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=AC56_RS08730;old_locus_tag=AC56_2976
NZ_JJLS01000231.1	Protein Homology	CDS	9280	10401	.	-	0	ID=cds-WP_000225221.1;Parent=gene-AC56_RS08730;Dbxref=GenBank:WP_000225221.1;Name=WP_000225221.1;Ontology_term=GO:0006571,GO:0046417,GO:0004106,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311490.1;locus_tag=AC56_RS08730;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=WP_000225221.1;transl_table=11
NZ_JJLS01000231.1	RefSeq	gene	10412	11482	.	-	.	ID=gene-AC56_RS08725;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;locus_tag=AC56_RS08725;old_locus_tag=AC56_2977
NZ_JJLS01000231.1	Protein Homology	CDS	10412	11482	.	-	0	ID=cds-WP_001168037.1;Parent=gene-AC56_RS08725;Dbxref=GenBank:WP_001168037.1;Name=WP_001168037.1;gbkey=CDS;gene=aroF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417092.1;locus_tag=AC56_RS08725;product=3-deoxy-7-phosphoheptulonate synthase AroF;protein_id=WP_001168037.1;transl_table=11
NZ_JJLS01000231.1	RefSeq	gene	11692	12057	.	+	.	ID=gene-AC56_RS08720;Name=yfiL;gbkey=Gene;gene=yfiL;gene_biotype=protein_coding;locus_tag=AC56_RS08720;old_locus_tag=AC56_2978
NZ_JJLS01000231.1	Protein Homology	CDS	11692	12057	.	+	0	ID=cds-WP_000976004.1;Parent=gene-AC56_RS08720;Dbxref=GenBank:WP_000976004.1;Name=WP_000976004.1;gbkey=CDS;gene=yfiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417093.2;locus_tag=AC56_RS08720;product=DUF2799 domain-containing protein;protein_id=WP_000976004.1;transl_table=11
NZ_JJLS01000231.1	RefSeq	gene	12207	12725	.	+	.	ID=gene-AC56_RS08715;Name=yfiR;gbkey=Gene;gene=yfiR;gene_biotype=protein_coding;locus_tag=AC56_RS08715;old_locus_tag=AC56_2979
NZ_JJLS01000231.1	Protein Homology	CDS	12207	12725	.	+	0	ID=cds-WP_001212391.1;Parent=gene-AC56_RS08715;Dbxref=GenBank:WP_001212391.1;Name=WP_001212391.1;gbkey=CDS;gene=yfiR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311493.1;locus_tag=AC56_RS08715;product=YfiR family protein;protein_id=WP_001212391.1;transl_table=11
NZ_JJLS01000231.1	RefSeq	gene	12715	13941	.	+	.	ID=gene-AC56_RS08710;Name=dgcN;gbkey=Gene;gene=dgcN;gene_biotype=protein_coding;locus_tag=AC56_RS08710;old_locus_tag=AC56_2980
NZ_JJLS01000231.1	Protein Homology	CDS	12715	13941	.	+	0	ID=cds-WP_000969032.1;Parent=gene-AC56_RS08710;Dbxref=GenBank:WP_000969032.1;Name=WP_000969032.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;gene=dgcN;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417095.1;locus_tag=AC56_RS08710;product=diguanylate cyclase DgcN;protein_id=WP_000969032.1;transl_table=11
NZ_JJLS01000231.1	RefSeq	gene	13957	14439	.	+	.	ID=gene-AC56_RS0126755;Name=yfiB;gbkey=Gene;gene=yfiB;gene_biotype=protein_coding;locus_tag=AC56_RS0126755;old_locus_tag=AC56_2981
NZ_JJLS01000231.1	Protein Homology	CDS	13957	14439	.	+	0	ID=cds-WP_000589847.1;Parent=gene-AC56_RS0126755;Dbxref=GenBank:WP_000589847.1;Name=WP_000589847.1;gbkey=CDS;gene=yfiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417096.1;locus_tag=AC56_RS0126755;product=OmpA family protein;protein_id=WP_000589847.1;transl_table=11
NZ_JJLS01000231.1	RefSeq	gene	14515	14862	.	-	.	ID=gene-AC56_RS08705;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=AC56_RS08705;old_locus_tag=AC56_2982
NZ_JJLS01000231.1	Protein Homology	CDS	14515	14862	.	-	0	ID=cds-WP_000065253.1;Parent=gene-AC56_RS08705;Dbxref=GenBank:WP_000065253.1;Name=WP_000065253.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012768745.1;locus_tag=AC56_RS08705;product=50S ribosomal protein L19;protein_id=WP_000065253.1;transl_table=11
NZ_JJLS01000231.1	RefSeq	gene	14904	15671	.	-	.	ID=gene-AC56_RS08700;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=AC56_RS08700;old_locus_tag=AC56_2983
NZ_JJLS01000231.1	Protein Homology	CDS	14904	15671	.	-	0	ID=cds-WP_000264777.1;Parent=gene-AC56_RS08700;Dbxref=GenBank:WP_000264777.1;Name=WP_000264777.1;Ontology_term=GO:0030488,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311497.1;locus_tag=AC56_RS08700;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_000264777.1;transl_table=11
NZ_JJLS01000231.1	RefSeq	gene	15702	16250	.	-	.	ID=gene-AC56_RS08695;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=AC56_RS08695;old_locus_tag=AC56_2984
NZ_JJLS01000231.1	Protein Homology	CDS	15702	16250	.	-	0	ID=cds-WP_000043335.1;Parent=gene-AC56_RS08695;Dbxref=GenBank:WP_000043335.1;Name=WP_000043335.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043333.1;locus_tag=AC56_RS08695;product=ribosome maturation factor RimM;protein_id=WP_000043335.1;transl_table=11
NZ_JJLS01000231.1	RefSeq	gene	16269	16517	.	-	.	ID=gene-AC56_RS08690;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=AC56_RS08690;old_locus_tag=AC56_2985
NZ_JJLS01000231.1	Protein Homology	CDS	16269	16517	.	-	0	ID=cds-WP_000256450.1;Parent=gene-AC56_RS08690;Dbxref=GenBank:WP_000256450.1;Name=WP_000256450.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000256453.1;locus_tag=AC56_RS08690;product=30S ribosomal protein S16;protein_id=WP_000256450.1;transl_table=11
NZ_JJLS01000231.1	RefSeq	gene	16654	18015	.	-	.	ID=gene-AC56_RS08685;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=AC56_RS08685;old_locus_tag=AC56_2986
NZ_JJLS01000231.1	Protein Homology	CDS	16654	18015	.	-	0	ID=cds-WP_000460035.1;Parent=gene-AC56_RS08685;Dbxref=GenBank:WP_000460035.1;Name=WP_000460035.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=AC56_RS08685;product=signal recognition particle protein;protein_id=WP_000460035.1;transl_table=11
NZ_JJLS01000231.1	RefSeq	gene	18182	18973	.	+	.	ID=gene-AC56_RS08680;Name=ypjD;gbkey=Gene;gene=ypjD;gene_biotype=protein_coding;locus_tag=AC56_RS08680;old_locus_tag=AC56_2987
NZ_JJLS01000231.1	Protein Homology	CDS	18182	18973	.	+	0	ID=cds-WP_001338897.1;Parent=gene-AC56_RS08680;Dbxref=GenBank:WP_001338897.1;Name=WP_001338897.1;Ontology_term=GO:0005886;gbkey=CDS;gene=ypjD;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417102.4;locus_tag=AC56_RS08680;product=cytochrome C assembly family protein;protein_id=WP_001338897.1;transl_table=11
NZ_JJLS01000231.1	RefSeq	gene	18994	20280	.	+	.	ID=gene-AC56_RS08675;Name=yfjD;gbkey=Gene;gene=yfjD;gene_biotype=protein_coding;locus_tag=AC56_RS08675;old_locus_tag=AC56_2988
NZ_JJLS01000231.1	Protein Homology	CDS	18994	20280	.	+	0	ID=cds-WP_077251771.1;Parent=gene-AC56_RS08675;Dbxref=GenBank:WP_077251771.1;Name=WP_077251771.1;gbkey=CDS;gene=yfjD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026171.3;locus_tag=AC56_RS08675;product=HlyC/CorC family transporter;protein_id=WP_077251771.1;transl_table=11
NZ_JJLS01000231.1	RefSeq	gene	20335	20928	.	-	.	ID=gene-AC56_RS08670;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=AC56_RS08670;old_locus_tag=AC56_2989
NZ_JJLS01000231.1	Protein Homology	CDS	20335	20928	.	-	0	ID=cds-WP_001296310.1;Parent=gene-AC56_RS08670;Dbxref=GenBank:WP_001296310.1;Name=WP_001296310.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311503.1;locus_tag=AC56_RS08670;product=nucleotide exchange factor GrpE;protein_id=WP_001296310.1;transl_table=11
NZ_JJLS01000231.1	RefSeq	gene	21051	21929	.	+	.	ID=gene-AC56_RS08665;Name=nadK;gbkey=Gene;gene=nadK;gene_biotype=protein_coding;locus_tag=AC56_RS08665;old_locus_tag=AC56_2991
NZ_JJLS01000231.1	Protein Homology	CDS	21051	21929	.	+	0	ID=cds-WP_001059169.1;Parent=gene-AC56_RS08665;Dbxref=GenBank:WP_001059169.1;Name=WP_001059169.1;Ontology_term=GO:0003951;gbkey=CDS;gene=nadK;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239499.1;locus_tag=AC56_RS08665;product=NAD(+) kinase;protein_id=WP_001059169.1;transl_table=11
NZ_JJLS01000231.1	RefSeq	gene	22015	23676	.	+	.	ID=gene-AC56_RS08660;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=AC56_RS08660;old_locus_tag=AC56_2992
NZ_JJLS01000231.1	Protein Homology	CDS	22015	23676	.	+	0	ID=cds-WP_000880910.1;Parent=gene-AC56_RS08660;Dbxref=GenBank:WP_000880910.1;Name=WP_000880910.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026172.1;locus_tag=AC56_RS08660;product=DNA repair protein RecN;protein_id=WP_000880910.1;transl_table=11
NZ_JJLS01000231.1	RefSeq	gene	23825	24166	.	+	.	ID=gene-AC56_RS08655;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=AC56_RS08655;old_locus_tag=AC56_2993
NZ_JJLS01000231.1	Protein Homology	CDS	23825	24166	.	+	0	ID=cds-WP_001203437.1;Parent=gene-AC56_RS08655;Dbxref=GenBank:WP_001203437.1;Name=WP_001203437.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417107.2;locus_tag=AC56_RS08655;product=outer membrane protein assembly factor BamE;protein_id=WP_001203437.1;transl_table=11
NZ_JJLS01000231.1	RefSeq	gene	24228	24518	.	-	.	ID=gene-AC56_RS08650;Name=yfjF;gbkey=Gene;gene=yfjF;gene_biotype=protein_coding;locus_tag=AC56_RS08650;old_locus_tag=AC56_2994
NZ_JJLS01000231.1	Protein Homology	CDS	24228	24518	.	-	0	ID=cds-WP_001117838.1;Parent=gene-AC56_RS08650;Dbxref=GenBank:WP_001117838.1;Name=WP_001117838.1;gbkey=CDS;gene=yfjF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417108.4;locus_tag=AC56_RS08650;product=RnfH family protein;protein_id=WP_001117838.1;transl_table=11
NZ_JJLS01000231.1	RefSeq	gene	24508	24945	.	-	.	ID=gene-AC56_RS08645;Name=ratA;gbkey=Gene;gene=ratA;gene_biotype=protein_coding;locus_tag=AC56_RS08645;old_locus_tag=AC56_2995
NZ_JJLS01000231.1	Protein Homology	CDS	24508	24945	.	-	0	ID=cds-WP_001300750.1;Parent=gene-AC56_RS08645;Dbxref=GenBank:WP_001300750.1;Name=WP_001300750.1;gbkey=CDS;gene=ratA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010376629.1;locus_tag=AC56_RS08645;product=type II toxin-antitoxin system toxin RatA;protein_id=WP_001300750.1;transl_table=11
NZ_JJLS01000231.1	RefSeq	gene	25116	25598	.	+	.	ID=gene-AC56_RS08640;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=AC56_RS08640;old_locus_tag=AC56_2996
NZ_JJLS01000231.1	Protein Homology	CDS	25116	25598	.	+	0	ID=cds-WP_000162569.1;Parent=gene-AC56_RS08640;Dbxref=GenBank:WP_000162569.1;Name=WP_000162569.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311509.1;locus_tag=AC56_RS08640;product=SsrA-binding protein SmpB;protein_id=WP_000162569.1;transl_table=11
NZ_JJLS01000231.1	RefSeq	gene	25813	26175	.	+	.	ID=gene-AC56_RS27965;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=AC56_RS27965
NZ_JJLS01000231.1	cmsearch	tmRNA	25813	26175	.	+	.	ID=rna-AC56_RS27965;Parent=gene-AC56_RS27965;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS27965;product=transfer-messenger RNA
NZ_JJLS01000231.1	cmsearch	exon	25813	26175	.	+	.	ID=exon-AC56_RS27965-1;Parent=rna-AC56_RS27965;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS27965;product=transfer-messenger RNA
NZ_JJLS01000231.1	RefSeq	pseudogene	26379	27620	.	+	.	ID=gene-AC56_RS0126765;Name=intA;gbkey=Gene;gene=intA;gene_biotype=pseudogene;locus_tag=AC56_RS0126765;old_locus_tag=AC56_2997;pseudo=true
NZ_JJLS01000231.1	Protein Homology	CDS	26379	27620	.	+	0	ID=cds-AC56_RS0126765;Parent=gene-AC56_RS0126765;Note=internal stop;gbkey=CDS;gene=intA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417111.1;locus_tag=AC56_RS0126765;product=integrase;pseudo=true;transl_table=11
NZ_JJLS01000231.1	RefSeq	gene	27789	28172	.	+	.	ID=gene-AC56_RS08635;Name=AC56_RS08635;end_range=28172,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS08635;old_locus_tag=AC56_2999;partial=true
NZ_JJLS01000231.1	Protein Homology	CDS	27789	28172	.	+	0	ID=cds-WP_032282811.1;Parent=gene-AC56_RS08635;Dbxref=GenBank:WP_032282811.1;Name=WP_032282811.1;end_range=28172,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS08635;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032282811.1;transl_table=11
##sequence-region NZ_JJLS01000232.1 1 16790
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000232.1	RefSeq	region	1	16790	.	+	.	ID=NZ_JJLS01000232.1:1..16790;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000232.1	RefSeq	pseudogene	1	406	.	-	.	ID=gene-AC56_RS08630;Name=AC56_RS08630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS08630;old_locus_tag=AC56_3000;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000232.1	Protein Homology	CDS	1	406	.	-	0	ID=cds-AC56_RS08630;Parent=gene-AC56_RS08630;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS08630;partial=true;product=IS5-like element ISKpn26 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000232.1	RefSeq	gene	692	1669	.	+	.	ID=gene-AC56_RS08625;Name=glaH;gbkey=Gene;gene=glaH;gene_biotype=protein_coding;locus_tag=AC56_RS08625;old_locus_tag=AC56_3001
NZ_JJLS01000232.1	Protein Homology	CDS	692	1669	.	+	0	ID=cds-WP_000993087.1;Parent=gene-AC56_RS08625;Dbxref=GenBank:WP_000993087.1;Name=WP_000993087.1;Ontology_term=GO:0050498;gbkey=CDS;gene=glaH;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C with 2-oxoglutarate as one donor%2C and the other dehydrogenated|0050498||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311547.2;locus_tag=AC56_RS08625;product=glutarate dioxygenase GlaH;protein_id=WP_000993087.1;transl_table=11
NZ_JJLS01000232.1	RefSeq	gene	1688	2956	.	+	.	ID=gene-AC56_RS08620;Name=lhgO;gbkey=Gene;gene=lhgO;gene_biotype=protein_coding;locus_tag=AC56_RS08620;old_locus_tag=AC56_3002
NZ_JJLS01000232.1	Protein Homology	CDS	1688	2956	.	+	0	ID=cds-WP_000271962.1;Parent=gene-AC56_RS08620;Dbxref=GenBank:WP_000271962.1;Name=WP_000271962.1;Ontology_term=GO:0016491;gbkey=CDS;gene=lhgO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311548.2;locus_tag=AC56_RS08620;product=L-2-hydroxyglutarate oxidase;protein_id=WP_000271962.1;transl_table=11
NZ_JJLS01000232.1	RefSeq	gene	2979	4427	.	+	.	ID=gene-AC56_RS08615;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=AC56_RS08615;old_locus_tag=AC56_3003
NZ_JJLS01000232.1	Protein Homology	CDS	2979	4427	.	+	0	ID=cds-WP_000772820.1;Parent=gene-AC56_RS08615;Dbxref=GenBank:WP_000772820.1;Name=WP_000772820.1;Ontology_term=GO:0009450,GO:0009013;gbkey=CDS;gene=gabD;go_function=succinate-semialdehyde dehydrogenase [NAD(P)+] activity|0009013||IEA;go_process=gamma-aminobutyric acid catabolic process|0009450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311549.1;locus_tag=AC56_RS08615;product=NADP-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_000772820.1;transl_table=11
NZ_JJLS01000232.1	RefSeq	gene	4441	5721	.	+	.	ID=gene-AC56_RS08610;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=protein_coding;locus_tag=AC56_RS08610;old_locus_tag=AC56_3004
NZ_JJLS01000232.1	Protein Homology	CDS	4441	5721	.	+	0	ID=cds-WP_032282813.1;Parent=gene-AC56_RS08610;Dbxref=GenBank:WP_032282813.1;Name=WP_032282813.1;Ontology_term=GO:0009448,GO:0030170;gbkey=CDS;gene=gabT;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311550.1;locus_tag=AC56_RS08610;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=WP_032282813.1;transl_table=11
NZ_JJLS01000232.1	RefSeq	gene	6032	7432	.	+	.	ID=gene-AC56_RS08605;Name=gabP;gbkey=Gene;gene=gabP;gene_biotype=protein_coding;locus_tag=AC56_RS08605;old_locus_tag=AC56_3005
NZ_JJLS01000232.1	Protein Homology	CDS	6032	7432	.	+	0	ID=cds-WP_001301367.1;Parent=gene-AC56_RS08605;Dbxref=GenBank:WP_001301367.1;Name=WP_001301367.1;Ontology_term=GO:0006865,GO:0015185,GO:0016020;gbkey=CDS;gene=gabP;go_component=membrane|0016020||IEA;go_function=gamma-aminobutyric acid transmembrane transporter activity|0015185||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311551.1;locus_tag=AC56_RS08605;product=GABA permease;protein_id=WP_001301367.1;transl_table=11
NZ_JJLS01000232.1	RefSeq	gene	7453	8115	.	+	.	ID=gene-AC56_RS08600;Name=csiR;gbkey=Gene;gene=csiR;gene_biotype=protein_coding;locus_tag=AC56_RS08600;old_locus_tag=AC56_3006
NZ_JJLS01000232.1	Protein Homology	CDS	7453	8115	.	+	0	ID=cds-WP_000156811.1;Parent=gene-AC56_RS08600;Dbxref=GenBank:WP_000156811.1;Name=WP_000156811.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=csiR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311552.2;locus_tag=AC56_RS08600;product=DNA-binding transcriptional regulator CsiR;protein_id=WP_000156811.1;transl_table=11
NZ_JJLS01000232.1	RefSeq	gene	8116	8565	.	-	.	ID=gene-AC56_RS08595;Name=kbp;gbkey=Gene;gene=kbp;gene_biotype=protein_coding;locus_tag=AC56_RS08595;old_locus_tag=AC56_3007
NZ_JJLS01000232.1	Protein Homology	CDS	8116	8565	.	-	0	ID=cds-WP_000522424.1;Parent=gene-AC56_RS08595;Dbxref=GenBank:WP_000522424.1;Name=WP_000522424.1;gbkey=CDS;gene=kbp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311553.1;locus_tag=AC56_RS08595;product=potassium binding protein Kbp;protein_id=WP_000522424.1;transl_table=11
NZ_JJLS01000232.1	RefSeq	gene	8649	8807	.	-	.	ID=gene-AC56_RS08590;Name=AC56_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS08590;old_locus_tag=AC56_3008
NZ_JJLS01000232.1	Protein Homology	CDS	8649	8807	.	-	0	ID=cds-WP_000508177.1;Parent=gene-AC56_RS08590;Dbxref=GenBank:WP_000508177.1;Name=WP_000508177.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311554.1;locus_tag=AC56_RS08590;product=YqaE/Pmp3 family membrane protein;protein_id=WP_000508177.1;transl_table=11
NZ_JJLS01000232.1	RefSeq	gene	8990	9289	.	+	.	ID=gene-AC56_RS08585;Name=AC56_RS08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS08585;old_locus_tag=AC56_3009
NZ_JJLS01000232.1	Protein Homology	CDS	8990	9289	.	+	0	ID=cds-WP_000137280.1;Parent=gene-AC56_RS08585;Dbxref=GenBank:WP_000137280.1;Name=WP_000137280.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417153.1;locus_tag=AC56_RS08585;product=ArsR/SmtB family transcription factor;protein_id=WP_000137280.1;transl_table=11
NZ_JJLS01000232.1	RefSeq	gene	9299	9823	.	+	.	ID=gene-AC56_RS08580;Name=ygaP;gbkey=Gene;gene=ygaP;gene_biotype=protein_coding;locus_tag=AC56_RS08580;old_locus_tag=AC56_3010
NZ_JJLS01000232.1	Protein Homology	CDS	9299	9823	.	+	0	ID=cds-WP_001229445.1;Parent=gene-AC56_RS08580;Dbxref=GenBank:WP_001229445.1;Name=WP_001229445.1;gbkey=CDS;gene=ygaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417154.1;locus_tag=AC56_RS08580;product=thiosulfate sulfurtransferase YgaP;protein_id=WP_001229445.1;transl_table=11
NZ_JJLS01000232.1	RefSeq	gene	9870	10274	.	-	.	ID=gene-AC56_RS08575;Name=stpA;gbkey=Gene;gene=stpA;gene_biotype=protein_coding;locus_tag=AC56_RS08575;old_locus_tag=AC56_3011
NZ_JJLS01000232.1	Protein Homology	CDS	9870	10274	.	-	0	ID=cds-WP_000115383.1;Parent=gene-AC56_RS08575;Dbxref=GenBank:WP_000115383.1;Name=WP_000115383.1;gbkey=CDS;gene=stpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311557.1;locus_tag=AC56_RS08575;product=DNA-binding protein StpA;protein_id=WP_000115383.1;transl_table=11
NZ_JJLS01000232.1	RefSeq	gene	10942	11391	.	+	.	ID=gene-AC56_RS08570;Name=alaE;gbkey=Gene;gene=alaE;gene_biotype=protein_coding;locus_tag=AC56_RS08570;old_locus_tag=AC56_3012
NZ_JJLS01000232.1	Protein Homology	CDS	10942	11391	.	+	0	ID=cds-WP_000492656.1;Parent=gene-AC56_RS08570;Dbxref=GenBank:WP_000492656.1;Name=WP_000492656.1;gbkey=CDS;gene=alaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311558.1;locus_tag=AC56_RS08570;product=L-alanine exporter AlaE;protein_id=WP_000492656.1;transl_table=11
NZ_JJLS01000232.1	RefSeq	gene	11428	11772	.	-	.	ID=gene-AC56_RS08565;Name=AC56_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS08565;old_locus_tag=AC56_3013
NZ_JJLS01000232.1	Protein Homology	CDS	11428	11772	.	-	0	ID=cds-WP_000281320.1;Parent=gene-AC56_RS08565;Dbxref=GenBank:WP_000281320.1;Name=WP_000281320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311559.1;locus_tag=AC56_RS08565;product=DUF2002 family protein;protein_id=WP_000281320.1;transl_table=11
NZ_JJLS01000232.1	RefSeq	gene	11924	12253	.	+	.	ID=gene-AC56_RS08560;Name=AC56_RS08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS08560;old_locus_tag=AC56_3014
NZ_JJLS01000232.1	Protein Homology	CDS	11924	12253	.	+	0	ID=cds-WP_001295174.1;Parent=gene-AC56_RS08560;Dbxref=GenBank:WP_001295174.1;Name=WP_001295174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311560.2;locus_tag=AC56_RS08560;product=DUF883 domain-containing protein;protein_id=WP_001295174.1;transl_table=11
NZ_JJLS01000232.1	RefSeq	gene	12501	12746	.	+	.	ID=gene-AC56_RS08555;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=AC56_RS08555;old_locus_tag=AC56_3015
NZ_JJLS01000232.1	Protein Homology	CDS	12501	12746	.	+	0	ID=cds-WP_001223227.1;Parent=gene-AC56_RS08555;Dbxref=GenBank:WP_001223227.1;Name=WP_001223227.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311563.1;locus_tag=AC56_RS08555;product=glutaredoxin-like protein NrdH;protein_id=WP_001223227.1;transl_table=11
NZ_JJLS01000232.1	RefSeq	gene	12743	13153	.	+	.	ID=gene-AC56_RS08550;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=AC56_RS08550;old_locus_tag=AC56_3016
NZ_JJLS01000232.1	Protein Homology	CDS	12743	13153	.	+	0	ID=cds-WP_001397683.1;Parent=gene-AC56_RS08550;Dbxref=GenBank:WP_001397683.1;Name=WP_001397683.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311564.1;locus_tag=AC56_RS08550;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_001397683.1;transl_table=11
NZ_JJLS01000232.1	RefSeq	gene	13126	15270	.	+	.	ID=gene-AC56_RS08545;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=AC56_RS08545;old_locus_tag=AC56_3017
NZ_JJLS01000232.1	Protein Homology	CDS	13126	15270	.	+	0	ID=cds-WP_000246527.1;Parent=gene-AC56_RS08545;Dbxref=GenBank:WP_000246527.1;Name=WP_000246527.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417161.1;locus_tag=AC56_RS08545;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_000246527.1;transl_table=11
NZ_JJLS01000232.1	RefSeq	gene	15280	16239	.	+	.	ID=gene-AC56_RS08540;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=AC56_RS08540;old_locus_tag=AC56_3018
NZ_JJLS01000232.1	Protein Homology	CDS	15280	16239	.	+	0	ID=cds-WP_000777969.1;Parent=gene-AC56_RS08540;Dbxref=GenBank:WP_000777969.1;Name=WP_000777969.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417162.1;locus_tag=AC56_RS08540;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000777969.1;transl_table=11
NZ_JJLS01000232.1	RefSeq	gene	16420	16790	.	-	.	ID=gene-AC56_RS08535;Name=AC56_RS08535;end_range=16790,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS08535;old_locus_tag=AC56_3019;partial=true
NZ_JJLS01000232.1	Protein Homology	CDS	16420	16790	.	-	2	ID=cds-WP_032277598.1;Parent=gene-AC56_RS08535;Dbxref=GenBank:WP_032277598.1;Name=WP_032277598.1;end_range=16790,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS08535;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032277598.1;transl_table=11
##sequence-region NZ_JJLS01000233.1 1 1536
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000233.1	RefSeq	region	1	1536	.	+	.	ID=NZ_JJLS01000233.1:1..1536;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000233.1	RefSeq	gene	123	199	.	-	.	ID=gene-AC56_RS08530;Name=AC56_RS08530;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS08530;old_locus_tag=AC56_3021
NZ_JJLS01000233.1	tRNAscan-SE	tRNA	123	199	.	-	.	ID=rna-AC56_RS08530;Parent=gene-AC56_RS08530;anticodon=(pos:complement(163..165));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS08530;product=tRNA-Arg
NZ_JJLS01000233.1	tRNAscan-SE	exon	123	199	.	-	.	ID=exon-AC56_RS08530-1;Parent=rna-AC56_RS08530;anticodon=(pos:complement(163..165));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS08530;product=tRNA-Arg
NZ_JJLS01000233.1	RefSeq	gene	262	338	.	-	.	ID=gene-AC56_RS08525;Name=AC56_RS08525;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS08525;old_locus_tag=AC56_3022
NZ_JJLS01000233.1	tRNAscan-SE	tRNA	262	338	.	-	.	ID=rna-AC56_RS08525;Parent=gene-AC56_RS08525;anticodon=(pos:complement(302..304));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS08525;product=tRNA-Arg
NZ_JJLS01000233.1	tRNAscan-SE	exon	262	338	.	-	.	ID=exon-AC56_RS08525-1;Parent=rna-AC56_RS08525;anticodon=(pos:complement(302..304));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS08525;product=tRNA-Arg
NZ_JJLS01000233.1	RefSeq	gene	342	434	.	-	.	ID=gene-AC56_RS08520;Name=AC56_RS08520;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS08520;old_locus_tag=AC56_3023
NZ_JJLS01000233.1	tRNAscan-SE	tRNA	342	434	.	-	.	ID=rna-AC56_RS08520;Parent=gene-AC56_RS08520;anticodon=(pos:complement(398..400));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS08520;product=tRNA-Ser
NZ_JJLS01000233.1	tRNAscan-SE	exon	342	434	.	-	.	ID=exon-AC56_RS08520-1;Parent=rna-AC56_RS08520;anticodon=(pos:complement(398..400));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS08520;product=tRNA-Ser
NZ_JJLS01000233.1	RefSeq	gene	750	935	.	-	.	ID=gene-AC56_RS08515;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=AC56_RS08515;old_locus_tag=AC56_3024
NZ_JJLS01000233.1	Protein Homology	CDS	750	935	.	-	0	ID=cds-WP_000906486.1;Parent=gene-AC56_RS08515;Dbxref=GenBank:WP_000906486.1;Name=WP_000906486.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774971.1;locus_tag=AC56_RS08515;product=carbon storage regulator CsrA;protein_id=WP_000906486.1;transl_table=11
NZ_JJLS01000233.1	RefSeq	gene	1170	1536	.	-	.	ID=gene-AC56_RS08510;Name=AC56_RS08510;end_range=1536,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS08510;old_locus_tag=AC56_3026;partial=true
NZ_JJLS01000233.1	Protein Homology	CDS	1170	1536	.	-	1	ID=cds-WP_032282816.1;Parent=gene-AC56_RS08510;Dbxref=GenBank:WP_032282816.1;Name=WP_032282816.1;Ontology_term=GO:0003676;end_range=1536,.;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311581.1;locus_tag=AC56_RS08510;partial=true;product=DHHA1 domain-containing protein;protein_id=WP_032282816.1;transl_table=11
##sequence-region NZ_JJLS01000234.1 1 76596
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000234.1	RefSeq	region	1	76596	.	+	.	ID=NZ_JJLS01000234.1:1..76596;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000234.1	RefSeq	gene	1	478	.	-	.	ID=gene-AC56_RS08505;Name=AC56_RS08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS08505;old_locus_tag=AC56_3027;partial=true;start_range=.,1
NZ_JJLS01000234.1	Protein Homology	CDS	1	478	.	-	0	ID=cds-WP_072201902.1;Parent=gene-AC56_RS08505;Dbxref=GenBank:WP_072201902.1;Name=WP_072201902.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS08505;partial=true;product=IS5 family transposase;protein_id=WP_072201902.1;start_range=.,1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	750	1952	.	+	.	ID=gene-AC56_RS08500;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=AC56_RS08500;old_locus_tag=AC56_3028
NZ_JJLS01000234.1	Protein Homology	CDS	750	1952	.	+	0	ID=cds-WP_000985483.1;Parent=gene-AC56_RS08500;Dbxref=GenBank:WP_000985483.1;Name=WP_000985483.1;Ontology_term=GO:0031460,GO:0005524;gbkey=CDS;gene=proV;go_function=ATP binding|0005524||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417163.1;locus_tag=AC56_RS08500;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=WP_000985483.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	1945	3009	.	+	.	ID=gene-AC56_RS08495;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=AC56_RS08495;old_locus_tag=AC56_3029
NZ_JJLS01000234.1	Protein Homology	CDS	1945	3009	.	+	0	ID=cds-WP_000774988.1;Parent=gene-AC56_RS08495;Dbxref=GenBank:WP_000774988.1;Name=WP_000774988.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=proW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417164.1;locus_tag=AC56_RS08495;product=glycine betaine/L-proline ABC transporter permease ProW;protein_id=WP_000774988.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	3066	4058	.	+	.	ID=gene-AC56_RS08490;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=AC56_RS08490;old_locus_tag=AC56_3030
NZ_JJLS01000234.1	Protein Homology	CDS	3066	4058	.	+	0	ID=cds-WP_001216521.1;Parent=gene-AC56_RS08490;Dbxref=GenBank:WP_001216521.1;Name=WP_001216521.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;gene=proX;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311569.1;locus_tag=AC56_RS08490;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;protein_id=WP_001216521.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	4250	5398	.	+	.	ID=gene-AC56_RS08485;Name=AC56_RS08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS08485;old_locus_tag=AC56_3032
NZ_JJLS01000234.1	Protein Homology	CDS	4250	5398	.	+	0	ID=cds-WP_050439697.1;Parent=gene-AC56_RS08485;Dbxref=GenBank:WP_050439697.1;Name=WP_050439697.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311570.1;locus_tag=AC56_RS08485;product=MFS transporter;protein_id=WP_050439697.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	5558	6295	.	+	.	ID=gene-AC56_RS08480;Name=ygaZ;gbkey=Gene;gene=ygaZ;gene_biotype=protein_coding;locus_tag=AC56_RS08480;old_locus_tag=AC56_3033
NZ_JJLS01000234.1	Protein Homology	CDS	5558	6295	.	+	0	ID=cds-WP_032278823.1;Parent=gene-AC56_RS08480;Dbxref=GenBank:WP_032278823.1;Name=WP_032278823.1;gbkey=CDS;gene=ygaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311571.1;locus_tag=AC56_RS08480;product=L-valine exporter subunit YgaZ;protein_id=WP_032278823.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	6285	6620	.	+	.	ID=gene-AC56_RS08475;Name=ygaH;gbkey=Gene;gene=ygaH;gene_biotype=protein_coding;locus_tag=AC56_RS08475;old_locus_tag=AC56_3034
NZ_JJLS01000234.1	Protein Homology	CDS	6285	6620	.	+	0	ID=cds-WP_000119763.1;Parent=gene-AC56_RS08475;Dbxref=GenBank:WP_000119763.1;Name=WP_000119763.1;gbkey=CDS;gene=ygaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417168.1;locus_tag=AC56_RS08475;product=L-valine transporter subunit YgaH;protein_id=WP_000119763.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	6711	7241	.	+	.	ID=gene-AC56_RS08470;Name=emrR;gbkey=Gene;gene=emrR;gene_biotype=protein_coding;locus_tag=AC56_RS08470;old_locus_tag=AC56_3035
NZ_JJLS01000234.1	Protein Homology	CDS	6711	7241	.	+	0	ID=cds-WP_000378442.1;Parent=gene-AC56_RS08470;Dbxref=GenBank:WP_000378442.1;Name=WP_000378442.1;gbkey=CDS;gene=emrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311573.1;locus_tag=AC56_RS08470;product=multidrug efflux transporter EmrAB transcriptional repressor EmrR;protein_id=WP_000378442.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	7368	8540	.	+	.	ID=gene-AC56_RS08465;Name=emrA;gbkey=Gene;gene=emrA;gene_biotype=protein_coding;locus_tag=AC56_RS08465;old_locus_tag=AC56_3037
NZ_JJLS01000234.1	Protein Homology	CDS	7368	8540	.	+	0	ID=cds-WP_001295175.1;Parent=gene-AC56_RS08465;Dbxref=GenBank:WP_001295175.1;Name=WP_001295175.1;gbkey=CDS;gene=emrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311574.1;locus_tag=AC56_RS08465;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;protein_id=WP_001295175.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	8557	10095	.	+	.	ID=gene-AC56_RS08460;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=AC56_RS08460;old_locus_tag=AC56_3038
NZ_JJLS01000234.1	Protein Homology	CDS	8557	10095	.	+	0	ID=cds-WP_001295176.1;Parent=gene-AC56_RS08460;Dbxref=GenBank:WP_001295176.1;Name=WP_001295176.1;gbkey=CDS;gene=emrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311575.1;locus_tag=AC56_RS08460;product=multidrug efflux MFS transporter permease subunit EmrB;protein_id=WP_001295176.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	10159	10674	.	-	.	ID=gene-AC56_RS08455;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=AC56_RS08455;old_locus_tag=AC56_3039
NZ_JJLS01000234.1	Protein Homology	CDS	10159	10674	.	-	0	ID=cds-WP_001130211.1;Parent=gene-AC56_RS08455;Dbxref=GenBank:WP_001130211.1;Name=WP_001130211.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458247.1;locus_tag=AC56_RS08455;product=S-ribosylhomocysteine lyase;protein_id=WP_001130211.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	10824	12380	.	-	.	ID=gene-AC56_RS08450;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=AC56_RS08450;old_locus_tag=AC56_3040
NZ_JJLS01000234.1	Protein Homology	CDS	10824	12380	.	-	0	ID=cds-WP_000611812.1;Parent=gene-AC56_RS08450;Dbxref=GenBank:WP_000611812.1;Name=WP_000611812.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417173.1;locus_tag=AC56_RS08450;product=glutamate--cysteine ligase;protein_id=WP_000611812.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	12453	12881	.	-	.	ID=gene-AC56_RS08445;Name=yqaA;gbkey=Gene;gene=yqaA;gene_biotype=protein_coding;locus_tag=AC56_RS08445;old_locus_tag=AC56_3041
NZ_JJLS01000234.1	Protein Homology	CDS	12453	12881	.	-	0	ID=cds-WP_001287454.1;Parent=gene-AC56_RS08445;Dbxref=GenBank:WP_001287454.1;Name=WP_001287454.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yqaA;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417174.1;locus_tag=AC56_RS08445;product=YqaA family protein;protein_id=WP_001287454.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	12878	13444	.	-	.	ID=gene-AC56_RS08440;Name=yqaB;gbkey=Gene;gene=yqaB;gene_biotype=protein_coding;locus_tag=AC56_RS08440;old_locus_tag=AC56_3042
NZ_JJLS01000234.1	Protein Homology	CDS	12878	13444	.	-	0	ID=cds-WP_000273290.1;Parent=gene-AC56_RS08440;Dbxref=GenBank:WP_000273290.1;Name=WP_000273290.1;gbkey=CDS;gene=yqaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417175.1;locus_tag=AC56_RS08440;product=fructose-1-phosphate/6-phosphogluconate phosphatase;protein_id=WP_000273290.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	13725	13801	.	-	.	ID=gene-AC56_RS08435;Name=AC56_RS08435;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS08435;old_locus_tag=AC56_3043
NZ_JJLS01000234.1	tRNAscan-SE	tRNA	13725	13801	.	-	.	ID=rna-AC56_RS08435;Parent=gene-AC56_RS08435;anticodon=(pos:complement(13765..13767));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS08435;product=tRNA-Arg
NZ_JJLS01000234.1	tRNAscan-SE	exon	13725	13801	.	-	.	ID=exon-AC56_RS08435-1;Parent=rna-AC56_RS08435;anticodon=(pos:complement(13765..13767));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS08435;product=tRNA-Arg
NZ_JJLS01000234.1	RefSeq	gene	14000	14076	.	-	.	ID=gene-AC56_RS08430;Name=AC56_RS08430;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS08430;old_locus_tag=AC56_3044
NZ_JJLS01000234.1	tRNAscan-SE	tRNA	14000	14076	.	-	.	ID=rna-AC56_RS08430;Parent=gene-AC56_RS08430;anticodon=(pos:complement(14040..14042));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS08430;product=tRNA-Arg
NZ_JJLS01000234.1	tRNAscan-SE	exon	14000	14076	.	-	.	ID=exon-AC56_RS08430-1;Parent=rna-AC56_RS08430;anticodon=(pos:complement(14040..14042));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS08430;product=tRNA-Arg
NZ_JJLS01000234.1	RefSeq	gene	14139	14215	.	-	.	ID=gene-AC56_RS08425;Name=AC56_RS08425;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS08425;old_locus_tag=AC56_3045
NZ_JJLS01000234.1	tRNAscan-SE	tRNA	14139	14215	.	-	.	ID=rna-AC56_RS08425;Parent=gene-AC56_RS08425;anticodon=(pos:complement(14179..14181));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS08425;product=tRNA-Arg
NZ_JJLS01000234.1	tRNAscan-SE	exon	14139	14215	.	-	.	ID=exon-AC56_RS08425-1;Parent=rna-AC56_RS08425;anticodon=(pos:complement(14179..14181));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS08425;product=tRNA-Arg
NZ_JJLS01000234.1	RefSeq	gene	14278	14354	.	-	.	ID=gene-AC56_RS08420;Name=AC56_RS08420;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS08420;old_locus_tag=AC56_3046
NZ_JJLS01000234.1	tRNAscan-SE	tRNA	14278	14354	.	-	.	ID=rna-AC56_RS08420;Parent=gene-AC56_RS08420;anticodon=(pos:complement(14318..14320));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS08420;product=tRNA-Arg
NZ_JJLS01000234.1	tRNAscan-SE	exon	14278	14354	.	-	.	ID=exon-AC56_RS08420-1;Parent=rna-AC56_RS08420;anticodon=(pos:complement(14318..14320));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS08420;product=tRNA-Arg
NZ_JJLS01000234.1	RefSeq	gene	14553	14629	.	-	.	ID=gene-AC56_RS08415;Name=AC56_RS08415;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS08415;old_locus_tag=AC56_3047
NZ_JJLS01000234.1	tRNAscan-SE	tRNA	14553	14629	.	-	.	ID=rna-AC56_RS08415;Parent=gene-AC56_RS08415;anticodon=(pos:complement(14593..14595));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS08415;product=tRNA-Arg
NZ_JJLS01000234.1	tRNAscan-SE	exon	14553	14629	.	-	.	ID=exon-AC56_RS08415-1;Parent=rna-AC56_RS08415;anticodon=(pos:complement(14593..14595));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS08415;product=tRNA-Arg
NZ_JJLS01000234.1	RefSeq	gene	14633	14725	.	-	.	ID=gene-AC56_RS08410;Name=AC56_RS08410;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS08410;old_locus_tag=AC56_3048
NZ_JJLS01000234.1	tRNAscan-SE	tRNA	14633	14725	.	-	.	ID=rna-AC56_RS08410;Parent=gene-AC56_RS08410;anticodon=(pos:complement(14689..14691));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS08410;product=tRNA-Ser
NZ_JJLS01000234.1	tRNAscan-SE	exon	14633	14725	.	-	.	ID=exon-AC56_RS08410-1;Parent=rna-AC56_RS08410;anticodon=(pos:complement(14689..14691));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS08410;product=tRNA-Ser
NZ_JJLS01000234.1	RefSeq	gene	15041	15226	.	-	.	ID=gene-AC56_RS08405;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=AC56_RS08405;old_locus_tag=AC56_3049
NZ_JJLS01000234.1	Protein Homology	CDS	15041	15226	.	-	0	ID=cds-WP_000906486.1-2;Parent=gene-AC56_RS08405;Dbxref=GenBank:WP_000906486.1;Name=WP_000906486.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774971.1;locus_tag=AC56_RS08405;product=carbon storage regulator CsrA;protein_id=WP_000906486.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	15461	18091	.	-	.	ID=gene-AC56_RS08400;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=AC56_RS08400;old_locus_tag=AC56_3051
NZ_JJLS01000234.1	Protein Homology	CDS	15461	18091	.	-	0	ID=cds-WP_032278829.1;Parent=gene-AC56_RS08400;Dbxref=GenBank:WP_032278829.1;Name=WP_032278829.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311581.1;locus_tag=AC56_RS08400;product=alanine--tRNA ligase;protein_id=WP_032278829.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	18219	18719	.	-	.	ID=gene-AC56_RS08395;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=AC56_RS08395;old_locus_tag=AC56_3052
NZ_JJLS01000234.1	Protein Homology	CDS	18219	18719	.	-	0	ID=cds-WP_032278830.1;Parent=gene-AC56_RS08395;Dbxref=GenBank:WP_032278830.1;Name=WP_032278830.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417178.1;locus_tag=AC56_RS08395;product=recombination regulator RecX;protein_id=WP_032278830.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	18788	19849	.	-	.	ID=gene-AC56_RS08390;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=AC56_RS08390;old_locus_tag=AC56_3053
NZ_JJLS01000234.1	Protein Homology	CDS	18788	19849	.	-	0	ID=cds-WP_000963143.1;Parent=gene-AC56_RS08390;Dbxref=GenBank:WP_000963143.1;Name=WP_000963143.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311583.1;locus_tag=AC56_RS08390;product=recombinase RecA;protein_id=WP_000963143.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	19929	20426	.	-	.	ID=gene-AC56_RS08385;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=protein_coding;locus_tag=AC56_RS08385;old_locus_tag=AC56_3054
NZ_JJLS01000234.1	Protein Homology	CDS	19929	20426	.	-	0	ID=cds-WP_000132231.1;Parent=gene-AC56_RS08385;Dbxref=GenBank:WP_000132231.1;Name=WP_000132231.1;gbkey=CDS;gene=pncC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417180.1;locus_tag=AC56_RS08385;product=nicotinamide-nucleotide amidase;protein_id=WP_000132231.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	20571	21656	.	-	.	ID=gene-AC56_RS08380;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=AC56_RS08380;old_locus_tag=AC56_3055
NZ_JJLS01000234.1	Protein Homology	CDS	20571	21656	.	-	0	ID=cds-WP_001295177.1;Parent=gene-AC56_RS08380;Dbxref=GenBank:WP_001295177.1;Name=WP_001295177.1;gbkey=CDS;gene=mltB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417181.1;locus_tag=AC56_RS08380;product=lytic murein transglycosylase B;protein_id=WP_001295177.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	21912	22475	.	+	.	ID=gene-AC56_RS08375;Name=srlA;gbkey=Gene;gene=srlA;gene_biotype=protein_coding;locus_tag=AC56_RS08375;old_locus_tag=AC56_3056
NZ_JJLS01000234.1	Protein Homology	CDS	21912	22475	.	+	0	ID=cds-WP_000573321.1;Parent=gene-AC56_RS08375;Dbxref=GenBank:WP_000573321.1;Name=WP_000573321.1;Ontology_term=GO:0009401,GO:0015795;gbkey=CDS;gene=srlA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026180.1;locus_tag=AC56_RS08375;product=PTS glucitol/sorbitol transporter subunit IIC;protein_id=WP_000573321.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	22472	23431	.	+	.	ID=gene-AC56_RS08370;Name=srlE;gbkey=Gene;gene=srlE;gene_biotype=protein_coding;locus_tag=AC56_RS08370;old_locus_tag=AC56_3057
NZ_JJLS01000234.1	Protein Homology	CDS	22472	23431	.	+	0	ID=cds-WP_000148875.1;Parent=gene-AC56_RS08370;Dbxref=GenBank:WP_000148875.1;Name=WP_000148875.1;Ontology_term=GO:0009401,GO:0015795,GO:0008982,GO:0016301;gbkey=CDS;gene=srlE;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026181.1;locus_tag=AC56_RS08370;product=PTS glucitol/sorbitol transporter subunit IIB;protein_id=WP_000148875.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	23442	23813	.	+	.	ID=gene-AC56_RS08365;Name=srlB;gbkey=Gene;gene=srlB;gene_biotype=protein_coding;gene_synonym=gutB;locus_tag=AC56_RS08365;old_locus_tag=AC56_3058
NZ_JJLS01000234.1	Protein Homology	CDS	23442	23813	.	+	0	ID=cds-WP_000216194.1;Parent=gene-AC56_RS08365;Dbxref=GenBank:WP_000216194.1;Name=WP_000216194.1;gbkey=CDS;gene=srlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417184.1;locus_tag=AC56_RS08365;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=WP_000216194.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	23817	24596	.	+	.	ID=gene-AC56_RS08360;Name=srlD;gbkey=Gene;gene=srlD;gene_biotype=protein_coding;locus_tag=AC56_RS08360;old_locus_tag=AC56_3059
NZ_JJLS01000234.1	Protein Homology	CDS	23817	24596	.	+	0	ID=cds-WP_001077358.1;Parent=gene-AC56_RS08360;Dbxref=GenBank:WP_001077358.1;Name=WP_001077358.1;Ontology_term=GO:0016491;gbkey=CDS;gene=srlD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417185.1;locus_tag=AC56_RS08360;product=sorbitol-6-phosphate dehydrogenase;protein_id=WP_001077358.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	24701	25060	.	+	.	ID=gene-AC56_RS08355;Name=gutM;gbkey=Gene;gene=gutM;gene_biotype=protein_coding;locus_tag=AC56_RS08355;old_locus_tag=AC56_3060
NZ_JJLS01000234.1	Protein Homology	CDS	24701	25060	.	+	0	ID=cds-WP_000252908.1;Parent=gene-AC56_RS08355;Dbxref=GenBank:WP_000252908.1;Name=WP_000252908.1;gbkey=CDS;gene=gutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417186.1;locus_tag=AC56_RS08355;product=transcriptional regulator GutM;protein_id=WP_000252908.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	25127	25900	.	+	.	ID=gene-AC56_RS08350;Name=srlR;gbkey=Gene;gene=srlR;gene_biotype=protein_coding;gene_synonym=gutR;locus_tag=AC56_RS08350;old_locus_tag=AC56_3061
NZ_JJLS01000234.1	Protein Homology	CDS	25127	25900	.	+	0	ID=cds-WP_000804550.1;Parent=gene-AC56_RS08350;Dbxref=GenBank:WP_000804550.1;Name=WP_000804550.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=srlR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417187.1;locus_tag=AC56_RS08350;product=glucitol operon DNA-binding transcriptional repressor SrlR;protein_id=WP_000804550.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	25893	26858	.	+	.	ID=gene-AC56_RS08345;Name=gutQ;gbkey=Gene;gene=gutQ;gene_biotype=protein_coding;locus_tag=AC56_RS08345;old_locus_tag=AC56_3062
NZ_JJLS01000234.1	Protein Homology	CDS	25893	26858	.	+	0	ID=cds-WP_001287420.1;Parent=gene-AC56_RS08345;Dbxref=GenBank:WP_001287420.1;Name=WP_001287420.1;gbkey=CDS;gene=gutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311591.2;locus_tag=AC56_RS08345;product=arabinose-5-phosphate isomerase GutQ;protein_id=WP_001287420.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	26855	28369	.	-	.	ID=gene-AC56_RS08340;Name=norR;gbkey=Gene;gene=norR;gene_biotype=protein_coding;locus_tag=AC56_RS08340;old_locus_tag=AC56_3063
NZ_JJLS01000234.1	Protein Homology	CDS	26855	28369	.	-	0	ID=cds-WP_000010749.1;Parent=gene-AC56_RS08340;Dbxref=GenBank:WP_000010749.1;Name=WP_000010749.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=norR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417189.2;locus_tag=AC56_RS08340;product=nitric oxide reductase transcriptional regulator NorR;protein_id=WP_000010749.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	28556	29995	.	+	.	ID=gene-AC56_RS08335;Name=norV;gbkey=Gene;gene=norV;gene_biotype=protein_coding;locus_tag=AC56_RS08335;old_locus_tag=AC56_3064
NZ_JJLS01000234.1	Protein Homology	CDS	28556	29995	.	+	0	ID=cds-WP_000029611.1;Parent=gene-AC56_RS08335;Dbxref=GenBank:WP_000029611.1;Name=WP_000029611.1;Ontology_term=GO:0009055,GO:0010181,GO:0016966,GO:0046872;gbkey=CDS;gene=norV;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,nitric oxide reductase activity|0016966||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708517.1;locus_tag=AC56_RS08335;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=WP_000029611.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	29992	31125	.	+	.	ID=gene-AC56_RS08330;Name=norW;gbkey=Gene;gene=norW;gene_biotype=protein_coding;locus_tag=AC56_RS08330;old_locus_tag=AC56_3065
NZ_JJLS01000234.1	Protein Homology	CDS	29992	31125	.	+	0	ID=cds-WP_000064738.1;Parent=gene-AC56_RS08330;Dbxref=GenBank:WP_000064738.1;Name=WP_000064738.1;Ontology_term=GO:0016731;gbkey=CDS;gene=norW;go_function=oxidoreductase activity%2C acting on iron-sulfur proteins as donors%2C NAD or NADP as acceptor|0016731||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417191.1;locus_tag=AC56_RS08330;product=NADH:flavorubredoxin reductase NorW;protein_id=WP_000064738.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	31253	33505	.	-	.	ID=gene-AC56_RS08325;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=AC56_RS08325;old_locus_tag=AC56_3066
NZ_JJLS01000234.1	Protein Homology	CDS	31253	33505	.	-	0	ID=cds-WP_032278847.1;Parent=gene-AC56_RS08325;Dbxref=GenBank:WP_032278847.1;Name=WP_032278847.1;Ontology_term=GO:0036211,GO:0003998,GO:0016743,GO:0046872;gbkey=CDS;gene=hypF;go_function=acylphosphatase activity|0003998||IEA,carboxyl- or carbamoyltransferase activity|0016743||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417192.1;locus_tag=AC56_RS08325;product=carbamoyltransferase HypF;protein_id=WP_032278847.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	33658	34185	.	-	.	ID=gene-AC56_RS08320;Name=hydN;gbkey=Gene;gene=hydN;gene_biotype=protein_coding;locus_tag=AC56_RS08320;old_locus_tag=AC56_3067
NZ_JJLS01000234.1	Protein Homology	CDS	33658	34185	.	-	0	ID=cds-WP_032282818.1;Parent=gene-AC56_RS08320;Dbxref=GenBank:WP_032282818.1;Name=WP_032282818.1;gbkey=CDS;gene=hydN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311596.1;locus_tag=AC56_RS08320;product=electron transport protein HydN;protein_id=WP_032282818.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	34334	35344	.	-	.	ID=gene-AC56_RS08315;Name=ascG;gbkey=Gene;gene=ascG;gene_biotype=protein_coding;locus_tag=AC56_RS08315;old_locus_tag=AC56_3069
NZ_JJLS01000234.1	Protein Homology	CDS	34334	35344	.	-	0	ID=cds-WP_032144409.1;Parent=gene-AC56_RS08315;Dbxref=GenBank:WP_032144409.1;Name=WP_032144409.1;gbkey=CDS;gene=ascG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417194.2;locus_tag=AC56_RS08315;product=DNA-binding transcriptional regulator AscG;protein_id=WP_032144409.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	35604	37061	.	+	.	ID=gene-AC56_RS08310;Name=ascF;gbkey=Gene;gene=ascF;gene_biotype=protein_coding;locus_tag=AC56_RS08310;old_locus_tag=AC56_3070
NZ_JJLS01000234.1	Protein Homology	CDS	35604	37061	.	+	0	ID=cds-WP_032200822.1;Parent=gene-AC56_RS08310;Dbxref=GenBank:WP_032200822.1;Name=WP_032200822.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=ascF;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026182.1;locus_tag=AC56_RS08310;product=PTS cellobiose/arbutin/salicin transporter subunit IIBC;protein_id=WP_032200822.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	37070	38494	.	+	.	ID=gene-AC56_RS08305;Name=ascB;gbkey=Gene;gene=ascB;gene_biotype=protein_coding;locus_tag=AC56_RS08305;old_locus_tag=AC56_3071
NZ_JJLS01000234.1	Protein Homology	CDS	37070	38494	.	+	0	ID=cds-WP_001544046.1;Parent=gene-AC56_RS08305;Dbxref=GenBank:WP_001544046.1;Name=WP_001544046.1;gbkey=CDS;gene=ascB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311599.1;locus_tag=AC56_RS08305;product=6-phospho-beta-glucosidase AscB;protein_id=WP_001544046.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	38652	39122	.	-	.	ID=gene-AC56_RS08300;Name=hycI;gbkey=Gene;gene=hycI;gene_biotype=protein_coding;locus_tag=AC56_RS08300;old_locus_tag=AC56_3072
NZ_JJLS01000234.1	Protein Homology	CDS	38652	39122	.	-	0	ID=cds-WP_000132961.1;Parent=gene-AC56_RS08300;Dbxref=GenBank:WP_000132961.1;Name=WP_000132961.1;Ontology_term=GO:0036211,GO:0004190;gbkey=CDS;gene=hycI;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311600.1;locus_tag=AC56_RS08300;product=hydrogenase maturation peptidase HycI;protein_id=WP_000132961.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	39115	39525	.	-	.	ID=gene-AC56_RS08295;Name=hycH;gbkey=Gene;gene=hycH;gene_biotype=protein_coding;locus_tag=AC56_RS08295;old_locus_tag=AC56_3073
NZ_JJLS01000234.1	Protein Homology	CDS	39115	39525	.	-	0	ID=cds-WP_032278832.1;Parent=gene-AC56_RS08295;Dbxref=GenBank:WP_032278832.1;Name=WP_032278832.1;gbkey=CDS;gene=hycH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311601.1;locus_tag=AC56_RS08295;product=formate hydrogenlyase assembly protein HycH;protein_id=WP_032278832.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	39522	40289	.	-	.	ID=gene-AC56_RS08290;Name=hycG;gbkey=Gene;gene=hycG;gene_biotype=protein_coding;locus_tag=AC56_RS08290;old_locus_tag=AC56_3074
NZ_JJLS01000234.1	Protein Homology	CDS	39522	40289	.	-	0	ID=cds-WP_000067401.1;Parent=gene-AC56_RS08290;Dbxref=GenBank:WP_000067401.1;Name=WP_000067401.1;gbkey=CDS;gene=hycG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311602.1;locus_tag=AC56_RS08290;product=formate hydrogenlyase subunit HycG;protein_id=WP_000067401.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	40289	40831	.	-	.	ID=gene-AC56_RS08285;Name=hycF;gbkey=Gene;gene=hycF;gene_biotype=protein_coding;locus_tag=AC56_RS08285;old_locus_tag=AC56_3075
NZ_JJLS01000234.1	Protein Homology	CDS	40289	40831	.	-	0	ID=cds-WP_000493781.1;Parent=gene-AC56_RS08285;Dbxref=GenBank:WP_000493781.1;Name=WP_000493781.1;gbkey=CDS;gene=hycF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417200.1;locus_tag=AC56_RS08285;product=formate hydrogenlyase subunit HycF;protein_id=WP_000493781.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	40841	42550	.	-	.	ID=gene-AC56_RS08280;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=AC56_RS08280;old_locus_tag=AC56_3076
NZ_JJLS01000234.1	Protein Homology	CDS	40841	42550	.	-	0	ID=cds-WP_001288122.1;Parent=gene-AC56_RS08280;Dbxref=GenBank:WP_001288122.1;Name=WP_001288122.1;gbkey=CDS;gene=hycE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130590.1;locus_tag=AC56_RS08280;product=formate hydrogenlyase subunit HycE;protein_id=WP_001288122.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	42568	43491	.	-	.	ID=gene-AC56_RS08275;Name=hycD;gbkey=Gene;gene=hycD;gene_biotype=protein_coding;locus_tag=AC56_RS08275;old_locus_tag=AC56_3077
NZ_JJLS01000234.1	Protein Homology	CDS	42568	43491	.	-	0	ID=cds-WP_032278834.1;Parent=gene-AC56_RS08275;Dbxref=GenBank:WP_032278834.1;Name=WP_032278834.1;gbkey=CDS;gene=hycD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417202.1;locus_tag=AC56_RS08275;product=formate hydrogenlyase subunit HycD;protein_id=WP_032278834.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	43494	45320	.	-	.	ID=gene-AC56_RS08270;Name=hycC;gbkey=Gene;gene=hycC;gene_biotype=protein_coding;locus_tag=AC56_RS08270;old_locus_tag=AC56_3078
NZ_JJLS01000234.1	Protein Homology	CDS	43494	45320	.	-	0	ID=cds-WP_001274386.1;Parent=gene-AC56_RS08270;Dbxref=GenBank:WP_001274386.1;Name=WP_001274386.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=hycC;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417203.1;locus_tag=AC56_RS08270;product=formate hydrogenlyase subunit 3;protein_id=WP_001274386.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	45317	45928	.	-	.	ID=gene-AC56_RS08265;Name=hycB;gbkey=Gene;gene=hycB;gene_biotype=protein_coding;locus_tag=AC56_RS08265;old_locus_tag=AC56_3079
NZ_JJLS01000234.1	Protein Homology	CDS	45317	45928	.	-	0	ID=cds-WP_001079186.1;Parent=gene-AC56_RS08265;Dbxref=GenBank:WP_001079186.1;Name=WP_001079186.1;gbkey=CDS;gene=hycB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417204.1;locus_tag=AC56_RS08265;product=formate hydrogenlyase subunit HycB;protein_id=WP_001079186.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	46053	46514	.	-	.	ID=gene-AC56_RS08260;Name=hycA;gbkey=Gene;gene=hycA;gene_biotype=protein_coding;locus_tag=AC56_RS08260;old_locus_tag=AC56_3080
NZ_JJLS01000234.1	Protein Homology	CDS	46053	46514	.	-	0	ID=cds-WP_000158056.1;Parent=gene-AC56_RS08260;Dbxref=GenBank:WP_000158056.1;Name=WP_000158056.1;gbkey=CDS;gene=hycA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311608.1;locus_tag=AC56_RS08260;product=formate hydrogenlyase regulator HycA;protein_id=WP_000158056.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	46726	47076	.	+	.	ID=gene-AC56_RS08255;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=AC56_RS08255;old_locus_tag=AC56_3081
NZ_JJLS01000234.1	Protein Homology	CDS	46726	47076	.	+	0	ID=cds-WP_001299100.1;Parent=gene-AC56_RS08255;Dbxref=GenBank:WP_001299100.1;Name=WP_001299100.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311609.1;locus_tag=AC56_RS08255;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_001299100.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	47080	47952	.	+	.	ID=gene-AC56_RS08250;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=AC56_RS08250;old_locus_tag=AC56_3082
NZ_JJLS01000234.1	Protein Homology	CDS	47080	47952	.	+	0	ID=cds-WP_000337665.1;Parent=gene-AC56_RS08250;Dbxref=GenBank:WP_000337665.1;Name=WP_000337665.1;Ontology_term=GO:0051604,GO:0003924,GO:0016151;gbkey=CDS;gene=hypB;go_function=GTPase activity|0003924||IEA,nickel cation binding|0016151||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417207.1;locus_tag=AC56_RS08250;product=hydrogenase nickel incorporation protein HypB;protein_id=WP_000337665.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	47943	48215	.	+	.	ID=gene-AC56_RS08245;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=AC56_RS08245;old_locus_tag=AC56_3083
NZ_JJLS01000234.1	Protein Homology	CDS	47943	48215	.	+	0	ID=cds-WP_000334881.1;Parent=gene-AC56_RS08245;Dbxref=GenBank:WP_000334881.1;Name=WP_000334881.1;gbkey=CDS;gene=hypC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311611.1;locus_tag=AC56_RS08245;product=hydrogenase 3 maturation protein HypC;protein_id=WP_000334881.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	48215	49336	.	+	.	ID=gene-AC56_RS08240;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=AC56_RS08240;old_locus_tag=AC56_3084
NZ_JJLS01000234.1	Protein Homology	CDS	48215	49336	.	+	0	ID=cds-WP_001212981.1;Parent=gene-AC56_RS08240;Dbxref=GenBank:WP_001212981.1;Name=WP_001212981.1;Ontology_term=GO:0036211,GO:0016530;gbkey=CDS;gene=hypD;go_function=metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708530.1;locus_tag=AC56_RS08240;product=hydrogenase formation protein HypD;protein_id=WP_001212981.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	49333	50343	.	+	.	ID=gene-AC56_RS08235;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=AC56_RS08235;old_locus_tag=AC56_3085
NZ_JJLS01000234.1	Protein Homology	CDS	49333	50343	.	+	0	ID=cds-WP_032278835.1;Parent=gene-AC56_RS08235;Dbxref=GenBank:WP_032278835.1;Name=WP_032278835.1;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417210.2;locus_tag=AC56_RS08235;product=hydrogenase maturation carbamoyl dehydratase HypE;protein_id=WP_032278835.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	50417	52495	.	+	.	ID=gene-AC56_RS08230;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=AC56_RS08230;old_locus_tag=AC56_3086
NZ_JJLS01000234.1	Protein Homology	CDS	50417	52495	.	+	0	ID=cds-WP_032278836.1;Parent=gene-AC56_RS08230;Dbxref=GenBank:WP_032278836.1;Name=WP_032278836.1;Ontology_term=GO:0006355,GO:0005515,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=flhA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311614.1;locus_tag=AC56_RS08230;product=formate hydrogenlyase transcriptional activator FlhA;protein_id=WP_032278836.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	52532	52885	.	-	.	ID=gene-AC56_RS08225;Name=ygbA;gbkey=Gene;gene=ygbA;gene_biotype=protein_coding;locus_tag=AC56_RS08225;old_locus_tag=AC56_3087
NZ_JJLS01000234.1	Protein Homology	CDS	52532	52885	.	-	0	ID=cds-WP_000015497.1;Parent=gene-AC56_RS08225;Dbxref=GenBank:WP_000015497.1;Name=WP_000015497.1;gbkey=CDS;gene=ygbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417212.1;locus_tag=AC56_RS08225;product=nitrous oxide-stimulated promoter family protein;protein_id=WP_000015497.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	52917	53096	.	-	.	ID=gene-AC56_RS08220;Name=AC56_RS08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS08220;old_locus_tag=AC56_3088
NZ_JJLS01000234.1	Protein Homology	CDS	52917	53096	.	-	0	ID=cds-WP_000611928.1;Parent=gene-AC56_RS08220;Dbxref=GenBank:WP_000611928.1;Name=WP_000611928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001363568.1;locus_tag=AC56_RS08220;product=hypothetical protein;protein_id=WP_000611928.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	53172	55733	.	+	.	ID=gene-AC56_RS08215;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=AC56_RS08215;old_locus_tag=AC56_3089
NZ_JJLS01000234.1	Protein Homology	CDS	53172	55733	.	+	0	ID=cds-WP_032278837.1;Parent=gene-AC56_RS08215;Dbxref=GenBank:WP_032278837.1;Name=WP_032278837.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311616.1;locus_tag=AC56_RS08215;product=DNA mismatch repair protein MutS;protein_id=WP_032278837.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	55839	56495	.	+	.	ID=gene-AC56_RS08210;Name=pphB;gbkey=Gene;gene=pphB;gene_biotype=protein_coding;locus_tag=AC56_RS08210;old_locus_tag=AC56_3090
NZ_JJLS01000234.1	Protein Homology	CDS	55839	56495	.	+	0	ID=cds-WP_001141322.1;Parent=gene-AC56_RS08210;Dbxref=GenBank:WP_001141322.1;Name=WP_001141322.1;gbkey=CDS;gene=pphB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417214.1;locus_tag=AC56_RS08210;product=protein-serine/threonine phosphatase;protein_id=WP_001141322.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	56546	57313	.	-	.	ID=gene-AC56_RS08205;Name=ygbI;gbkey=Gene;gene=ygbI;gene_biotype=protein_coding;locus_tag=AC56_RS08205;old_locus_tag=AC56_3091
NZ_JJLS01000234.1	Protein Homology	CDS	56546	57313	.	-	0	ID=cds-WP_001300386.1;Parent=gene-AC56_RS08205;Dbxref=GenBank:WP_001300386.1;Name=WP_001300386.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ygbI;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417215.2;locus_tag=AC56_RS08205;product=DNA-binding transcriptional repressor YgbI;protein_id=WP_001300386.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	57509	58417	.	+	.	ID=gene-AC56_RS08200;Name=ltnD;gbkey=Gene;gene=ltnD;gene_biotype=protein_coding;locus_tag=AC56_RS08200;old_locus_tag=AC56_3092
NZ_JJLS01000234.1	Protein Homology	CDS	57509	58417	.	+	0	ID=cds-WP_032278840.1;Parent=gene-AC56_RS08200;Dbxref=GenBank:WP_032278840.1;Name=WP_032278840.1;Ontology_term=GO:0005975,GO:0016616;gbkey=CDS;gene=ltnD;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417216.1;locus_tag=AC56_RS08200;product=L-threonate dehydrogenase;protein_id=WP_032278840.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	58414	59676	.	+	.	ID=gene-AC56_RS08195;Name=otnK;gbkey=Gene;gene=otnK;gene_biotype=protein_coding;locus_tag=AC56_RS08195;old_locus_tag=AC56_3093
NZ_JJLS01000234.1	Protein Homology	CDS	58414	59676	.	+	0	ID=cds-WP_000590403.1;Parent=gene-AC56_RS08195;Dbxref=GenBank:WP_000590403.1;Name=WP_000590403.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;gene=otnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001649192.1;locus_tag=AC56_RS08195;product=3-oxo-tetronate kinase;protein_id=WP_000590403.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	59673	60311	.	+	.	ID=gene-AC56_RS08190;Name=ygbL;gbkey=Gene;gene=ygbL;gene_biotype=protein_coding;locus_tag=AC56_RS08190;old_locus_tag=AC56_3094
NZ_JJLS01000234.1	Protein Homology	CDS	59673	60311	.	+	0	ID=cds-WP_001278994.1;Parent=gene-AC56_RS08190;Dbxref=GenBank:WP_001278994.1;Name=WP_001278994.1;gbkey=CDS;gene=ygbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417218.1;locus_tag=AC56_RS08190;product=aldolase;protein_id=WP_001278994.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	60316	61092	.	+	.	ID=gene-AC56_RS08185;Name=ygbM;gbkey=Gene;gene=ygbM;gene_biotype=protein_coding;locus_tag=AC56_RS08185;old_locus_tag=AC56_3095
NZ_JJLS01000234.1	Protein Homology	CDS	60316	61092	.	+	0	ID=cds-WP_001136934.1;Parent=gene-AC56_RS08185;Dbxref=GenBank:WP_001136934.1;Name=WP_001136934.1;gbkey=CDS;gene=ygbM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417219.1;locus_tag=AC56_RS08185;product=HPr family phosphocarrier protein;protein_id=WP_001136934.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	61181	62545	.	+	.	ID=gene-AC56_RS08180;Name=ygbN;gbkey=Gene;gene=ygbN;gene_biotype=protein_coding;locus_tag=AC56_RS08180;old_locus_tag=AC56_3096
NZ_JJLS01000234.1	Protein Homology	CDS	61181	62545	.	+	0	ID=cds-WP_000104441.1;Parent=gene-AC56_RS08180;Dbxref=GenBank:WP_000104441.1;Name=WP_000104441.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=ygbN;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417220.1;locus_tag=AC56_RS08180;product=GntP family transporter;protein_id=WP_000104441.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	62639	63631	.	-	.	ID=gene-AC56_RS08175;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=AC56_RS08175;old_locus_tag=AC56_3097
NZ_JJLS01000234.1	Protein Homology	CDS	62639	63631	.	-	0	ID=cds-WP_000081550.1;Parent=gene-AC56_RS08175;Dbxref=GenBank:WP_000081550.1;Name=WP_000081550.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=AC56_RS08175;product=RNA polymerase sigma factor RpoS;protein_id=WP_000081550.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	63694	64788	.	-	.	ID=gene-AC56_RS08170;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=AC56_RS08170;old_locus_tag=AC56_3098
NZ_JJLS01000234.1	Protein Homology	CDS	63694	64788	.	-	0	ID=cds-WP_306307598.1;Parent=gene-AC56_RS08170;Dbxref=GenBank:WP_306307598.1;Name=WP_306307598.1;gbkey=CDS;gene=nlpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417222.1;locus_tag=AC56_RS08170;product=murein hydrolase activator NlpD;protein_id=WP_306307598.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	64973	65599	.	-	.	ID=gene-AC56_RS08165;Name=pcm;gbkey=Gene;gene=pcm;gene_biotype=protein_coding;locus_tag=AC56_RS08165;old_locus_tag=AC56_3099
NZ_JJLS01000234.1	Protein Homology	CDS	64973	65599	.	-	0	ID=cds-WP_000254708.1;Parent=gene-AC56_RS08165;Dbxref=GenBank:WP_000254708.1;Name=WP_000254708.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;gene=pcm;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130872.1;locus_tag=AC56_RS08165;product=protein-L-isoaspartate O-methyltransferase;protein_id=WP_000254708.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	65593	66354	.	-	.	ID=gene-AC56_RS08160;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=AC56_RS08160;old_locus_tag=AC56_3100
NZ_JJLS01000234.1	Protein Homology	CDS	65593	66354	.	-	0	ID=cds-WP_001295182.1;Parent=gene-AC56_RS08160;Dbxref=GenBank:WP_001295182.1;Name=WP_001295182.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311625.1;locus_tag=AC56_RS08160;product=5'/3'-nucleotidase SurE;protein_id=WP_001295182.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	66335	67384	.	-	.	ID=gene-AC56_RS08155;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=AC56_RS08155;old_locus_tag=AC56_3101
NZ_JJLS01000234.1	Protein Homology	CDS	66335	67384	.	-	0	ID=cds-WP_000568924.1;Parent=gene-AC56_RS08155;Dbxref=GenBank:WP_000568924.1;Name=WP_000568924.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311626.1;locus_tag=AC56_RS08155;product=tRNA pseudouridine(13) synthase TruD;protein_id=WP_000568924.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	67381	67860	.	-	.	ID=gene-AC56_RS08150;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=AC56_RS08150;old_locus_tag=AC56_3102
NZ_JJLS01000234.1	Protein Homology	CDS	67381	67860	.	-	0	ID=cds-WP_001219242.1;Parent=gene-AC56_RS08150;Dbxref=GenBank:WP_001219242.1;Name=WP_001219242.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311627.1;locus_tag=AC56_RS08150;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_001219242.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	67860	68570	.	-	.	ID=gene-AC56_RS08145;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=AC56_RS08145;old_locus_tag=AC56_3103
NZ_JJLS01000234.1	Protein Homology	CDS	67860	68570	.	-	0	ID=cds-WP_032278843.1;Parent=gene-AC56_RS08145;Dbxref=GenBank:WP_032278843.1;Name=WP_032278843.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417227.1;locus_tag=AC56_RS08145;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_032278843.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	68589	68900	.	-	.	ID=gene-AC56_RS08140;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=AC56_RS08140;old_locus_tag=AC56_3104
NZ_JJLS01000234.1	Protein Homology	CDS	68589	68900	.	-	0	ID=cds-WP_000517476.1;Parent=gene-AC56_RS08140;Dbxref=GenBank:WP_000517476.1;Name=WP_000517476.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311629.1;locus_tag=AC56_RS08140;product=cell division protein FtsB;protein_id=WP_000517476.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	69094	69417	.	-	.	ID=gene-AC56_RS08135;Name=ygbE;gbkey=Gene;gene=ygbE;gene_biotype=protein_coding;locus_tag=AC56_RS08135;old_locus_tag=AC56_3105
NZ_JJLS01000234.1	Protein Homology	CDS	69094	69417	.	-	0	ID=cds-WP_001246104.1;Parent=gene-AC56_RS08135;Dbxref=GenBank:WP_001246104.1;Name=WP_001246104.1;gbkey=CDS;gene=ygbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417229.1;locus_tag=AC56_RS08135;product=DUF3561 family protein;protein_id=WP_001246104.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	69467	70072	.	-	.	ID=gene-AC56_RS08130;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=AC56_RS08130;old_locus_tag=AC56_3106
NZ_JJLS01000234.1	Protein Homology	CDS	69467	70072	.	-	0	ID=cds-WP_001173673.1;Parent=gene-AC56_RS08130;Dbxref=GenBank:WP_001173673.1;Name=WP_001173673.1;Ontology_term=GO:0000103,GO:0004020,GO:0005524;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA,ATP binding|0005524||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311631.1;locus_tag=AC56_RS08130;product=adenylyl-sulfate kinase;protein_id=WP_001173673.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	70072	71499	.	-	.	ID=gene-AC56_RS08125;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=AC56_RS08125;old_locus_tag=AC56_3107
NZ_JJLS01000234.1	Protein Homology	CDS	70072	71499	.	-	0	ID=cds-WP_032278844.1;Parent=gene-AC56_RS08125;Dbxref=GenBank:WP_032278844.1;Name=WP_032278844.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417231.1;locus_tag=AC56_RS08125;product=sulfate adenylyltransferase subunit CysN;protein_id=WP_032278844.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	71501	72409	.	-	.	ID=gene-AC56_RS08120;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=AC56_RS08120;old_locus_tag=AC56_3108
NZ_JJLS01000234.1	Protein Homology	CDS	71501	72409	.	-	0	ID=cds-WP_000372108.1;Parent=gene-AC56_RS08120;Dbxref=GenBank:WP_000372108.1;Name=WP_000372108.1;Ontology_term=GO:0000103,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130891.1;locus_tag=AC56_RS08120;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_000372108.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	72661	73698	.	+	.	ID=gene-AC56_RS08115;Name=iap;gbkey=Gene;gene=iap;gene_biotype=protein_coding;locus_tag=AC56_RS08115;old_locus_tag=AC56_3109
NZ_JJLS01000234.1	Protein Homology	CDS	72661	73698	.	+	0	ID=cds-WP_032278845.1;Parent=gene-AC56_RS08115;Dbxref=GenBank:WP_032278845.1;Name=WP_032278845.1;gbkey=CDS;gene=iap;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311634.1;locus_tag=AC56_RS08115;product=alkaline phosphatase isozyme conversion aminopeptidase;protein_id=WP_032278845.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	74097	74381	.	-	.	ID=gene-AC56_RS0126785;Name=cas2e;gbkey=Gene;gene=cas2e;gene_biotype=protein_coding;locus_tag=AC56_RS0126785
NZ_JJLS01000234.1	Protein Homology	CDS	74097	74381	.	-	0	ID=cds-WP_001514500.1;Parent=gene-AC56_RS0126785;Dbxref=GenBank:WP_001514500.1;Name=WP_001514500.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2e;go_function=RNA endonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417234.2;locus_tag=AC56_RS0126785;product=type I-E CRISPR-associated endoribonuclease Cas2e;protein_id=WP_001514500.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	74383	75300	.	-	.	ID=gene-AC56_RS08110;Name=cas1e;gbkey=Gene;gene=cas1e;gene_biotype=protein_coding;locus_tag=AC56_RS08110;old_locus_tag=AC56_3111
NZ_JJLS01000234.1	Protein Homology	CDS	74383	75300	.	-	0	ID=cds-WP_000312400.1;Parent=gene-AC56_RS08110;Dbxref=GenBank:WP_000312400.1;Name=WP_000312400.1;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1e;go_function=nucleic acid binding|0003676||IEA,DNA endonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417235.1;locus_tag=AC56_RS08110;product=type I-E CRISPR-associated endonuclease Cas1e;protein_id=WP_000312400.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	gene	75316	75915	.	-	.	ID=gene-AC56_RS08105;Name=cas6e;gbkey=Gene;gene=cas6e;gene_biotype=protein_coding;locus_tag=AC56_RS08105;old_locus_tag=AC56_3112
NZ_JJLS01000234.1	Protein Homology	CDS	75316	75915	.	-	0	ID=cds-WP_000281395.1;Parent=gene-AC56_RS08105;Dbxref=GenBank:WP_000281395.1;Name=WP_000281395.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas6e;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417236.1;locus_tag=AC56_RS08105;product=type I-E CRISPR-associated protein Cas6/Cse3/CasE;protein_id=WP_000281395.1;transl_table=11
NZ_JJLS01000234.1	RefSeq	pseudogene	75902	75967	.	-	.	ID=gene-AC56_RS31500;Name=AC56_RS31500;end_range=75967,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS31500;partial=true;pseudo=true
NZ_JJLS01000234.1	Protein Homology	CDS	75902	75967	.	-	0	ID=cds-AC56_RS31500;Parent=gene-AC56_RS31500;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=75967,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417237.2;locus_tag=AC56_RS31500;partial=true;product=type I-E CRISPR-associated protein Cas5/CasD;pseudo=true;transl_table=11
NZ_JJLS01000234.1	RefSeq	pseudogene	76025	76596	.	+	.	ID=gene-AC56_RS08100;Name=AC56_RS08100;end_range=76596,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS08100;old_locus_tag=AC56_3113;partial=true;pseudo=true
NZ_JJLS01000234.1	Protein Homology	CDS	76025	76596	.	+	0	ID=cds-AC56_RS08100;Parent=gene-AC56_RS08100;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;end_range=76596,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=AC56_RS08100;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000235.1 1 17525
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000235.1	RefSeq	region	1	17525	.	+	.	ID=NZ_JJLS01000235.1:1..17525;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000235.1	RefSeq	gene	1	642	.	+	.	ID=gene-AC56_RS08095;Name=AC56_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS08095;old_locus_tag=AC56_3114;partial=true;start_range=.,1
NZ_JJLS01000235.1	Protein Homology	CDS	1	194	.	+	1	ID=cds-WP_248788903.1;Parent=gene-AC56_RS08095;Dbxref=GenBank:WP_248788903.1;Name=WP_248788903.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=AC56_RS08095;partial=true;product=IS1 family transposase;protein_id=WP_248788903.1;start_range=.,1;transl_table=11
NZ_JJLS01000235.1	Protein Homology	CDS	194	642	.	+	2	ID=cds-WP_248788903.1;Parent=gene-AC56_RS08095;Dbxref=GenBank:WP_248788903.1;Name=WP_248788903.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=AC56_RS08095;partial=true;product=IS1 family transposase;protein_id=WP_248788903.1;transl_table=11
NZ_JJLS01000235.1	RefSeq	gene	927	1661	.	-	.	ID=gene-AC56_RS08090;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;locus_tag=AC56_RS08090;old_locus_tag=AC56_3115
NZ_JJLS01000235.1	Protein Homology	CDS	927	1661	.	-	0	ID=cds-WP_000039862.1;Parent=gene-AC56_RS08090;Dbxref=GenBank:WP_000039862.1;Name=WP_000039862.1;Ontology_term=GO:0019379,GO:0004604;gbkey=CDS;gene=cysH;go_function=phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311644.1;locus_tag=AC56_RS08090;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_000039862.1;transl_table=11
NZ_JJLS01000235.1	RefSeq	gene	1735	3447	.	-	.	ID=gene-AC56_RS08085;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=AC56_RS08085;old_locus_tag=AC56_3116
NZ_JJLS01000235.1	Protein Homology	CDS	1735	3447	.	-	0	ID=cds-WP_032278849.1;Parent=gene-AC56_RS08085;Dbxref=GenBank:WP_032278849.1;Name=WP_032278849.1;Ontology_term=GO:0000103,GO:0008652,GO:0004783,GO:0050661,GO:0051539,GO:0009337;gbkey=CDS;gene=cysI;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA,NADP binding|0050661||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=sulfate assimilation|0000103||IEA,amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290736.1;locus_tag=AC56_RS08085;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=WP_032278849.1;transl_table=11
NZ_JJLS01000235.1	RefSeq	gene	3447	5246	.	-	.	ID=gene-AC56_RS08080;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=AC56_RS08080;old_locus_tag=AC56_3117
NZ_JJLS01000235.1	Protein Homology	CDS	3447	5246	.	-	0	ID=cds-WP_032278850.1;Parent=gene-AC56_RS08080;Dbxref=GenBank:WP_032278850.1;Name=WP_032278850.1;Ontology_term=GO:0000103,GO:0019344,GO:0004783,GO:0010181,GO:0050660;gbkey=CDS;gene=cysJ;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfate assimilation|0000103||IEA,cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417244.1;locus_tag=AC56_RS08080;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;protein_id=WP_032278850.1;transl_table=11
NZ_JJLS01000235.1	RefSeq	gene	5565	5927	.	+	.	ID=gene-AC56_RS08075;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=AC56_RS08075;old_locus_tag=AC56_3119
NZ_JJLS01000235.1	Protein Homology	CDS	5565	5927	.	+	0	ID=cds-WP_000108294.1;Parent=gene-AC56_RS08075;Dbxref=GenBank:WP_000108294.1;Name=WP_000108294.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708563.2;locus_tag=AC56_RS08075;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_000108294.1;transl_table=11
NZ_JJLS01000235.1	RefSeq	gene	6005	7276	.	+	.	ID=gene-AC56_RS08070;Name=ygcN;gbkey=Gene;gene=ygcN;gene_biotype=protein_coding;locus_tag=AC56_RS08070;old_locus_tag=AC56_3120
NZ_JJLS01000235.1	Protein Homology	CDS	6005	7276	.	+	0	ID=cds-WP_032222965.1;Parent=gene-AC56_RS08070;Dbxref=GenBank:WP_032222965.1;Name=WP_032222965.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ygcN;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417246.4;locus_tag=AC56_RS08070;product=FAD-dependent oxidoreductase;protein_id=WP_032222965.1;transl_table=11
NZ_JJLS01000235.1	RefSeq	gene	7267	7527	.	+	.	ID=gene-AC56_RS08065;Name=ygcO;gbkey=Gene;gene=ygcO;gene_biotype=protein_coding;locus_tag=AC56_RS08065;old_locus_tag=AC56_3121
NZ_JJLS01000235.1	Protein Homology	CDS	7267	7527	.	+	0	ID=cds-WP_000109526.1;Parent=gene-AC56_RS08065;Dbxref=GenBank:WP_000109526.1;Name=WP_000109526.1;gbkey=CDS;gene=ygcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417247.2;locus_tag=AC56_RS08065;product=ferredoxin family protein;protein_id=WP_000109526.1;transl_table=11
NZ_JJLS01000235.1	RefSeq	gene	7544	8119	.	+	.	ID=gene-AC56_RS08060;Name=ygcP;gbkey=Gene;gene=ygcP;gene_biotype=protein_coding;locus_tag=AC56_RS08060;old_locus_tag=AC56_3122
NZ_JJLS01000235.1	Protein Homology	CDS	7544	8119	.	+	0	ID=cds-WP_032278851.1;Parent=gene-AC56_RS08060;Dbxref=GenBank:WP_032278851.1;Name=WP_032278851.1;gbkey=CDS;gene=ygcP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417248.1;locus_tag=AC56_RS08060;product=glycerol-3-phosphate responsive antiterminator;protein_id=WP_032278851.1;transl_table=11
NZ_JJLS01000235.1	RefSeq	gene	8267	9127	.	-	.	ID=gene-AC56_RS08055;Name=ygcQ;gbkey=Gene;gene=ygcQ;gene_biotype=protein_coding;locus_tag=AC56_RS08055;old_locus_tag=AC56_3123
NZ_JJLS01000235.1	Protein Homology	CDS	8267	9127	.	-	0	ID=cds-WP_001299097.1;Parent=gene-AC56_RS08055;Dbxref=GenBank:WP_001299097.1;Name=WP_001299097.1;Ontology_term=GO:0009055,GO:0050660;gbkey=CDS;gene=ygcQ;go_function=electron transfer activity|0009055||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417249.4;locus_tag=AC56_RS08055;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_001299097.1;transl_table=11
NZ_JJLS01000235.1	RefSeq	gene	9124	9900	.	-	.	ID=gene-AC56_RS08050;Name=ygcR;gbkey=Gene;gene=ygcR;gene_biotype=protein_coding;locus_tag=AC56_RS08050;old_locus_tag=AC56_3124
NZ_JJLS01000235.1	Protein Homology	CDS	9124	9900	.	-	0	ID=cds-WP_032282826.1;Parent=gene-AC56_RS08050;Dbxref=GenBank:WP_032282826.1;Name=WP_032282826.1;gbkey=CDS;gene=ygcR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417250.4;locus_tag=AC56_RS08050;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WP_032282826.1;transl_table=11
NZ_JJLS01000235.1	RefSeq	gene	9878	11287	.	-	.	ID=gene-AC56_RS08045;Name=ygcS;gbkey=Gene;gene=ygcS;gene_biotype=protein_coding;locus_tag=AC56_RS08045;old_locus_tag=AC56_3125
NZ_JJLS01000235.1	Protein Homology	CDS	9878	11287	.	-	0	ID=cds-WP_074576463.1;Parent=gene-AC56_RS08045;Dbxref=GenBank:WP_074576463.1;Name=WP_074576463.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ygcS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708568.1;locus_tag=AC56_RS08045;product=MFS transporter;protein_id=WP_074576463.1;transl_table=11
NZ_JJLS01000235.1	RefSeq	gene	11309	12763	.	-	.	ID=gene-AC56_RS08040;Name=ygcU;gbkey=Gene;gene=ygcU;gene_biotype=protein_coding;locus_tag=AC56_RS08040;old_locus_tag=AC56_3126
NZ_JJLS01000235.1	Protein Homology	CDS	11309	12763	.	-	0	ID=cds-WP_032278854.1;Parent=gene-AC56_RS08040;Dbxref=GenBank:WP_032278854.1;Name=WP_032278854.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;gene=ygcU;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026183.1;locus_tag=AC56_RS08040;product=FAD-binding oxidoreductase;protein_id=WP_032278854.1;transl_table=11
NZ_JJLS01000235.1	RefSeq	gene	12833	13618	.	-	.	ID=gene-AC56_RS08035;Name=ygcW;gbkey=Gene;gene=ygcW;gene_biotype=protein_coding;locus_tag=AC56_RS08035;old_locus_tag=AC56_3127
NZ_JJLS01000235.1	Protein Homology	CDS	12833	13618	.	-	0	ID=cds-WP_000021321.1;Parent=gene-AC56_RS08035;Dbxref=GenBank:WP_000021321.1;Name=WP_000021321.1;gbkey=CDS;gene=ygcW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417254.4;locus_tag=AC56_RS08035;product=SDR family oxidoreductase;protein_id=WP_000021321.1;transl_table=11
NZ_JJLS01000235.1	RefSeq	gene	13937	15214	.	+	.	ID=gene-AC56_RS08030;Name=yqcE;gbkey=Gene;gene=yqcE;gene_biotype=protein_coding;locus_tag=AC56_RS08030;old_locus_tag=AC56_3128
NZ_JJLS01000235.1	Protein Homology	CDS	13937	15214	.	+	0	ID=cds-WP_001164544.1;Parent=gene-AC56_RS08030;Dbxref=GenBank:WP_001164544.1;Name=WP_001164544.1;Ontology_term=GO:0055085,GO:0015112,GO:0022857;gbkey=CDS;gene=yqcE;go_function=nitrate transmembrane transporter activity|0015112||IEA,transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417255.1;locus_tag=AC56_RS08030;product=MFS transporter;protein_id=WP_001164544.1;transl_table=11
NZ_JJLS01000235.1	RefSeq	gene	15241	16719	.	+	.	ID=gene-AC56_RS08025;Name=ygcE;gbkey=Gene;gene=ygcE;gene_biotype=protein_coding;locus_tag=AC56_RS08025;old_locus_tag=AC56_3129
NZ_JJLS01000235.1	Protein Homology	CDS	15241	16719	.	+	0	ID=cds-WP_032278855.1;Parent=gene-AC56_RS08025;Dbxref=GenBank:WP_032278855.1;Name=WP_032278855.1;Ontology_term=GO:0005975,GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;gene=ygcE;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417256.1;locus_tag=AC56_RS08025;product=FGGY-family carbohydrate kinase;protein_id=WP_032278855.1;transl_table=11
NZ_JJLS01000235.1	RefSeq	gene	17064	17525	.	+	.	ID=gene-AC56_RS08020;Name=AC56_RS08020;end_range=17525,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS08020;old_locus_tag=AC56_3130;partial=true
NZ_JJLS01000235.1	Protein Homology	CDS	17064	17525	.	+	0	ID=cds-WP_032277705.1;Parent=gene-AC56_RS08020;Dbxref=GenBank:WP_032277705.1;Name=WP_032277705.1;Ontology_term=GO:0004803;end_range=17525,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS08020;partial=true;product=IS5 family transposase;protein_id=WP_032277705.1;transl_table=11
##sequence-region NZ_JJLS01000236.1 1 2922
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000236.1	RefSeq	region	1	2922	.	+	.	ID=NZ_JJLS01000236.1:1..2922;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000236.1	RefSeq	pseudogene	1	458	.	+	.	ID=gene-AC56_RS08015;Name=AC56_RS08015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS08015;old_locus_tag=AC56_3131;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000236.1	Protein Homology	CDS	1	458	.	+	2	ID=cds-AC56_RS08015;Parent=gene-AC56_RS08015;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS08015;partial=true;product=IS5-like element IS903B family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000236.1	RefSeq	direct_repeat	850	1122	.	+	.	ID=id-NZ_JJLS01000236.1:850..1122;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=850..878;rpt_unit_seq=cggtttatccccgctggcgcggggaacac
NZ_JJLS01000236.1	RefSeq	gene	1462	2133	.	-	.	ID=gene-AC56_RS08010;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=AC56_RS08010;old_locus_tag=AC56_3132
NZ_JJLS01000236.1	Protein Homology	CDS	1462	2133	.	-	0	ID=cds-WP_001199973.1;Parent=gene-AC56_RS08010;Dbxref=GenBank:WP_001199973.1;Name=WP_001199973.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199960.1;locus_tag=AC56_RS08010;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_001199973.1;transl_table=11
NZ_JJLS01000236.1	RefSeq	gene	2272	2412	.	+	.	ID=gene-AC56_RS08005;Name=yqcG;gbkey=Gene;gene=yqcG;gene_biotype=protein_coding;locus_tag=AC56_RS08005;old_locus_tag=AC56_3133
NZ_JJLS01000236.1	Protein Homology	CDS	2272	2412	.	+	0	ID=cds-WP_001288228.1;Parent=gene-AC56_RS08005;Dbxref=GenBank:WP_001288228.1;Name=WP_001288228.1;gbkey=CDS;gene=yqcG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791252.1;locus_tag=AC56_RS08005;product=cell envelope stress response protein YqcG;protein_id=WP_001288228.1;transl_table=11
NZ_JJLS01000236.1	RefSeq	pseudogene	2454	2922	.	-	.	ID=gene-AC56_RS08000;Name=AC56_RS08000;end_range=2922,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS08000;old_locus_tag=AC56_3134;partial=true;pseudo=true
NZ_JJLS01000236.1	Protein Homology	CDS	2454	2922	.	-	2	ID=cds-AC56_RS08000;Parent=gene-AC56_RS08000;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=2922,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS08000;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000237.1 1 1667
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000237.1	RefSeq	region	1	1667	.	+	.	ID=NZ_JJLS01000237.1:1..1667;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000237.1	RefSeq	gene	1	359	.	-	.	ID=gene-AC56_RS07995;Name=AC56_RS07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS07995;old_locus_tag=AC56_3135;partial=true;start_range=.,1
NZ_JJLS01000237.1	Protein Homology	CDS	1	359	.	-	0	ID=cds-WP_131142095.1;Parent=gene-AC56_RS07995;Dbxref=GenBank:WP_131142095.1;Name=WP_131142095.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025113.6;locus_tag=AC56_RS07995;partial=true;product=transposase;protein_id=WP_131142095.1;start_range=.,1;transl_table=11
NZ_JJLS01000237.1	RefSeq	gene	898	1266	.	+	.	ID=gene-AC56_RS27815;Name=AC56_RS27815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS27815
NZ_JJLS01000237.1	GeneMarkS-2+	CDS	898	1266	.	+	0	ID=cds-WP_050439847.1;Parent=gene-AC56_RS27815;Dbxref=GenBank:WP_050439847.1;Name=WP_050439847.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS27815;product=hypothetical protein;protein_id=WP_050439847.1;transl_table=11
NZ_JJLS01000237.1	RefSeq	gene	1426	1667	.	+	.	ID=gene-AC56_RS0126800;Name=AC56_RS0126800;end_range=1667,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0126800;old_locus_tag=AC56_3137;partial=true
NZ_JJLS01000237.1	Protein Homology	CDS	1426	1667	.	+	0	ID=cds-WP_000179208.1-2;Parent=gene-AC56_RS0126800;Dbxref=GenBank:WP_000179208.1;Name=WP_000179208.1;end_range=1667,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS0126800;partial=true;product=IS1-like element transposase;protein_id=WP_000179208.1;transl_table=11
##sequence-region NZ_JJLS01000238.1 1 23316
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000238.1	RefSeq	region	1	23316	.	+	.	ID=NZ_JJLS01000238.1:1..23316;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000238.1	RefSeq	pseudogene	1	423	.	-	.	ID=gene-AC56_RS29955;Name=AC56_RS29955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS29955;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000238.1	Protein Homology	CDS	1	423	.	-	0	ID=cds-AC56_RS29955;Parent=gene-AC56_RS29955;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS29955;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000238.1	RefSeq	gene	536	1390	.	+	.	ID=gene-AC56_RS07985;Name=AC56_RS07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS07985;old_locus_tag=AC56_3139
NZ_JJLS01000238.1	Protein Homology	CDS	536	1390	.	+	0	ID=cds-WP_001351856.1;Parent=gene-AC56_RS07985;Dbxref=GenBank:WP_001351856.1;Name=WP_001351856.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417258.4;locus_tag=AC56_RS07985;product=TPM domain-containing protein;protein_id=WP_001351856.1;transl_table=11
NZ_JJLS01000238.1	RefSeq	gene	1450	2748	.	-	.	ID=gene-AC56_RS07980;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=AC56_RS07980;old_locus_tag=AC56_3140
NZ_JJLS01000238.1	Protein Homology	CDS	1450	2748	.	-	0	ID=cds-WP_000036723.1;Parent=gene-AC56_RS07980;Dbxref=GenBank:WP_000036723.1;Name=WP_000036723.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311666.1;locus_tag=AC56_RS07980;product=phosphopyruvate hydratase;protein_id=WP_000036723.1;transl_table=11
NZ_JJLS01000238.1	RefSeq	gene	2836	4473	.	-	.	ID=gene-AC56_RS07975;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=AC56_RS07975;old_locus_tag=AC56_3141
NZ_JJLS01000238.1	Protein Homology	CDS	2836	4473	.	-	0	ID=cds-WP_000210878.1;Parent=gene-AC56_RS07975;Dbxref=GenBank:WP_000210878.1;Name=WP_000210878.1;Ontology_term=GO:0006221,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=AC56_RS07975;product=glutamine hydrolyzing CTP synthase;protein_id=WP_000210878.1;transl_table=11
NZ_JJLS01000238.1	RefSeq	gene	4701	5492	.	-	.	ID=gene-AC56_RS07970;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=AC56_RS07970;old_locus_tag=AC56_3142
NZ_JJLS01000238.1	Protein Homology	CDS	4701	5492	.	-	0	ID=cds-WP_001071648.1;Parent=gene-AC56_RS07970;Dbxref=GenBank:WP_001071648.1;Name=WP_001071648.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311668.1;locus_tag=AC56_RS07970;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_001071648.1;transl_table=11
NZ_JJLS01000238.1	RefSeq	gene	5563	5898	.	-	.	ID=gene-AC56_RS07965;Name=mazF;gbkey=Gene;gene=mazF;gene_biotype=protein_coding;locus_tag=AC56_RS07965;old_locus_tag=AC56_3143
NZ_JJLS01000238.1	Protein Homology	CDS	5563	5898	.	-	0	ID=cds-WP_000254738.1;Parent=gene-AC56_RS07965;Dbxref=GenBank:WP_000254738.1;Name=WP_000254738.1;gbkey=CDS;gene=mazF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311669.1;locus_tag=AC56_RS07965;product=endoribonuclease MazF;protein_id=WP_000254738.1;transl_table=11
NZ_JJLS01000238.1	RefSeq	gene	5898	6146	.	-	.	ID=gene-AC56_RS07960;Name=mazE;gbkey=Gene;gene=mazE;gene_biotype=protein_coding;locus_tag=AC56_RS07960;old_locus_tag=AC56_3144
NZ_JJLS01000238.1	Protein Homology	CDS	5898	6146	.	-	0	ID=cds-WP_000581937.1;Parent=gene-AC56_RS07960;Dbxref=GenBank:WP_000581937.1;Name=WP_000581937.1;gbkey=CDS;gene=mazE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311670.1;locus_tag=AC56_RS07960;product=type II toxin-antitoxin system antitoxin MazE;protein_id=WP_000581937.1;transl_table=11
NZ_JJLS01000238.1	RefSeq	gene	6224	8458	.	-	.	ID=gene-AC56_RS07955;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=AC56_RS07955;old_locus_tag=AC56_3145
NZ_JJLS01000238.1	Protein Homology	CDS	6224	8458	.	-	0	ID=cds-WP_000226815.1;Parent=gene-AC56_RS07955;Dbxref=GenBank:WP_000226815.1;Name=WP_000226815.1;Ontology_term=GO:0015969;gbkey=CDS;gene=relA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311671.1;locus_tag=AC56_RS07955;product=GTP diphosphokinase;protein_id=WP_000226815.1;transl_table=11
NZ_JJLS01000238.1	RefSeq	gene	8506	9807	.	-	.	ID=gene-AC56_RS07950;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=AC56_RS07950;old_locus_tag=AC56_3146
NZ_JJLS01000238.1	Protein Homology	CDS	8506	9807	.	-	0	ID=cds-WP_000046812.1;Parent=gene-AC56_RS07950;Dbxref=GenBank:WP_000046812.1;Name=WP_000046812.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417265.1;locus_tag=AC56_RS07950;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_000046812.1;transl_table=11
NZ_JJLS01000238.1	RefSeq	gene	9864	12620	.	+	.	ID=gene-AC56_RS07945;Name=barA;gbkey=Gene;gene=barA;gene_biotype=protein_coding;locus_tag=AC56_RS07945;old_locus_tag=AC56_3147
NZ_JJLS01000238.1	Protein Homology	CDS	9864	12620	.	+	0	ID=cds-WP_032278860.1;Parent=gene-AC56_RS07945;Dbxref=GenBank:WP_032278860.1;Name=WP_032278860.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=barA;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311673.1;locus_tag=AC56_RS07945;product=two-component sensor histidine kinase BarA;protein_id=WP_032278860.1;transl_table=11
NZ_JJLS01000238.1	RefSeq	gene	12852	14192	.	-	.	ID=gene-AC56_RS07940;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=protein_coding;locus_tag=AC56_RS07940;old_locus_tag=AC56_3148
NZ_JJLS01000238.1	Protein Homology	CDS	12852	14192	.	-	0	ID=cds-WP_000098255.1;Parent=gene-AC56_RS07940;Dbxref=GenBank:WP_000098255.1;Name=WP_000098255.1;Ontology_term=GO:0019394,GO:0000287,GO:0008872;gbkey=CDS;gene=gudD;go_function=magnesium ion binding|0000287||IEA,glucarate dehydratase activity|0008872||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311674.1;locus_tag=AC56_RS07940;product=glucarate dehydratase;protein_id=WP_000098255.1;transl_table=11
NZ_JJLS01000238.1	RefSeq	gene	14213	15553	.	-	.	ID=gene-AC56_RS07935;Name=AC56_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS07935;old_locus_tag=AC56_3149
NZ_JJLS01000238.1	Protein Homology	CDS	14213	15553	.	-	0	ID=cds-WP_000235391.1;Parent=gene-AC56_RS07935;Dbxref=GenBank:WP_000235391.1;Name=WP_000235391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417268.1;locus_tag=AC56_RS07935;product=enolase C-terminal domain-like protein;protein_id=WP_000235391.1;transl_table=11
NZ_JJLS01000238.1	RefSeq	gene	15555	16907	.	-	.	ID=gene-AC56_RS07930;Name=gudP;gbkey=Gene;gene=gudP;gene_biotype=protein_coding;locus_tag=AC56_RS07930;old_locus_tag=AC56_3150
NZ_JJLS01000238.1	Protein Homology	CDS	15555	16907	.	-	0	ID=cds-WP_000097072.1;Parent=gene-AC56_RS07930;Dbxref=GenBank:WP_000097072.1;Name=WP_000097072.1;gbkey=CDS;gene=gudP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417269.1;locus_tag=AC56_RS07930;product=galactarate/glucarate/glycerate transporter GudP;protein_id=WP_000097072.1;transl_table=11
NZ_JJLS01000238.1	RefSeq	gene	17342	17791	.	-	.	ID=gene-AC56_RS07925;Name=AC56_RS07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS07925;old_locus_tag=AC56_3153
NZ_JJLS01000238.1	Protein Homology	CDS	17342	17791	.	-	0	ID=cds-WP_000807753.1;Parent=gene-AC56_RS07925;Dbxref=GenBank:WP_000807753.1;Name=WP_000807753.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311677.1;locus_tag=AC56_RS07925;product=flavodoxin;protein_id=WP_000807753.1;transl_table=11
NZ_JJLS01000238.1	RefSeq	gene	17809	18591	.	-	.	ID=gene-AC56_RS07920;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=AC56_RS07920;old_locus_tag=AC56_3154
NZ_JJLS01000238.1	Protein Homology	CDS	17809	18591	.	-	0	ID=cds-WP_000890001.1;Parent=gene-AC56_RS07920;Dbxref=GenBank:WP_000890001.1;Name=WP_000890001.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=truC;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417271.1;locus_tag=AC56_RS07920;product=tRNA pseudouridine(65) synthase TruC;protein_id=WP_000890001.1;transl_table=11
NZ_JJLS01000238.1	RefSeq	gene	18591	18920	.	-	.	ID=gene-AC56_RS07915;Name=AC56_RS07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS07915;old_locus_tag=AC56_3155
NZ_JJLS01000238.1	Protein Homology	CDS	18591	18920	.	-	0	ID=cds-WP_000206990.1;Parent=gene-AC56_RS07915;Dbxref=GenBank:WP_000206990.1;Name=WP_000206990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417272.1;locus_tag=AC56_RS07915;product=YqcC family protein;protein_id=WP_000206990.1;transl_table=11
NZ_JJLS01000238.1	RefSeq	gene	19542	20087	.	-	.	ID=gene-AC56_RS07910;Name=syd;gbkey=Gene;gene=syd;gene_biotype=protein_coding;locus_tag=AC56_RS07910;old_locus_tag=AC56_3156
NZ_JJLS01000238.1	Protein Homology	CDS	19542	20087	.	-	0	ID=cds-WP_000342431.1;Parent=gene-AC56_RS07910;Dbxref=GenBank:WP_000342431.1;Name=WP_000342431.1;Ontology_term=GO:0009898;gbkey=CDS;gene=syd;go_component=cytoplasmic side of plasma membrane|0009898||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417273.1;locus_tag=AC56_RS07910;product=SecY-interacting protein;protein_id=WP_000342431.1;transl_table=11
NZ_JJLS01000238.1	RefSeq	gene	20155	21003	.	+	.	ID=gene-AC56_RS07905;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=AC56_RS07905;old_locus_tag=AC56_3157
NZ_JJLS01000238.1	Protein Homology	CDS	20155	21003	.	+	0	ID=cds-WP_000100420.1;Parent=gene-AC56_RS07905;Dbxref=GenBank:WP_000100420.1;Name=WP_000100420.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417274.1;locus_tag=AC56_RS07905;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_000100420.1;transl_table=11
NZ_JJLS01000238.1	RefSeq	gene	21115	22479	.	+	.	ID=gene-AC56_RS07900;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=AC56_RS07900;old_locus_tag=AC56_3158
NZ_JJLS01000238.1	Protein Homology	CDS	21115	22479	.	+	0	ID=cds-WP_000627995.1;Parent=gene-AC56_RS07900;Dbxref=GenBank:WP_000627995.1;Name=WP_000627995.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311682.1;locus_tag=AC56_RS07900;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=WP_000627995.1;transl_table=11
NZ_JJLS01000238.1	RefSeq	pseudogene	23036	23316	.	+	.	ID=gene-AC56_RS07895;Name=AC56_RS07895;end_range=23316,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS07895;old_locus_tag=AC56_3159;partial=true;pseudo=true
NZ_JJLS01000238.1	Protein Homology	CDS	23036	23316	.	+	0	ID=cds-AC56_RS07895;Parent=gene-AC56_RS07895;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=23316,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311683.1;locus_tag=AC56_RS07895;partial=true;product=HAAAP family serine/threonine permease;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000239.1 1 2047
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000239.1	RefSeq	region	1	2047	.	+	.	ID=NZ_JJLS01000239.1:1..2047;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000239.1	RefSeq	gene	107	1204	.	-	.	ID=gene-AC56_RS07890;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=AC56_RS07890;old_locus_tag=AC56_3160
NZ_JJLS01000239.1	Protein Homology	CDS	107	1204	.	-	0	ID=cds-WP_000678646.1;Parent=gene-AC56_RS07890;Dbxref=GenBank:WP_000678646.1;Name=WP_000678646.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;gene=mltA;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785702.1;locus_tag=AC56_RS07890;product=murein transglycosylase A;protein_id=WP_000678646.1;transl_table=11
NZ_JJLS01000239.1	RefSeq	gene	1413	1489	.	+	.	ID=gene-AC56_RS07885;Name=AC56_RS07885;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS07885;old_locus_tag=AC56_3161
NZ_JJLS01000239.1	tRNAscan-SE	tRNA	1413	1489	.	+	.	ID=rna-AC56_RS07885;Parent=gene-AC56_RS07885;anticodon=(pos:1447..1449);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS07885;product=tRNA-Met
NZ_JJLS01000239.1	tRNAscan-SE	exon	1413	1489	.	+	.	ID=exon-AC56_RS07885-1;Parent=rna-AC56_RS07885;anticodon=(pos:1447..1449);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS07885;product=tRNA-Met
NZ_JJLS01000239.1	RefSeq	pseudogene	1564	2047	.	-	.	ID=gene-AC56_RS07880;Name=amiC;end_range=2047,.;gbkey=Gene;gene=amiC;gene_biotype=pseudogene;locus_tag=AC56_RS07880;old_locus_tag=AC56_3162;partial=true;pseudo=true
NZ_JJLS01000239.1	Protein Homology	CDS	1564	2047	.	-	1	ID=cds-AC56_RS07880;Parent=gene-AC56_RS07880;Note=Like AmiA%2C dependent on TAT (Twin-Arginine Translocation) system for export.%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2047,.;gbkey=CDS;gene=amiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311701.2;locus_tag=AC56_RS07880;partial=true;product=N-acetylmuramoyl-L-alanine amidase AmiC;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000240.1 1 60378
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000240.1	RefSeq	region	1	60378	.	+	.	ID=NZ_JJLS01000240.1:1..60378;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000240.1	RefSeq	gene	1	148	.	+	.	ID=gene-AC56_RS29970;Name=AC56_RS29970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS29970;old_locus_tag=AC56_3163;partial=true;start_range=.,1
NZ_JJLS01000240.1	Protein Homology	CDS	1	148	.	+	1	ID=cds-WP_113706248.1;Parent=gene-AC56_RS29970;Dbxref=GenBank:WP_113706248.1;Name=WP_113706248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311682.1;locus_tag=AC56_RS29970;partial=true;product=pyrimidine/purine nucleotide monophosphate nucleosidase domain-containing protein;protein_id=WP_113706248.1;start_range=.,1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	705	1994	.	+	.	ID=gene-AC56_RS07875;Name=sdaC;gbkey=Gene;gene=sdaC;gene_biotype=protein_coding;locus_tag=AC56_RS07875;old_locus_tag=AC56_3164
NZ_JJLS01000240.1	Protein Homology	CDS	705	1994	.	+	0	ID=cds-WP_000450476.1;Parent=gene-AC56_RS07875;Dbxref=GenBank:WP_000450476.1;Name=WP_000450476.1;gbkey=CDS;gene=sdaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311683.1;locus_tag=AC56_RS07875;product=HAAAP family serine/threonine permease SdaC;protein_id=WP_000450476.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	2052	3419	.	+	.	ID=gene-AC56_RS07870;Name=sdaB;gbkey=Gene;gene=sdaB;gene_biotype=protein_coding;locus_tag=AC56_RS07870;old_locus_tag=AC56_3165
NZ_JJLS01000240.1	Protein Homology	CDS	2052	3419	.	+	0	ID=cds-WP_000626368.1;Parent=gene-AC56_RS07870;Dbxref=GenBank:WP_000626368.1;Name=WP_000626368.1;gbkey=CDS;gene=sdaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708592.1;locus_tag=AC56_RS07870;product=L-serine ammonia-lyase II;protein_id=WP_000626368.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	3531	4286	.	+	.	ID=gene-AC56_RS07865;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=AC56_RS07865;old_locus_tag=AC56_3166
NZ_JJLS01000240.1	Protein Homology	CDS	3531	4286	.	+	0	ID=cds-WP_032278863.1;Parent=gene-AC56_RS07865;Dbxref=GenBank:WP_032278863.1;Name=WP_032278863.1;Ontology_term=GO:0033567,GO:0003677,GO:0017108;gbkey=CDS;gene=xni;go_function=DNA binding|0003677||IEA,5'-flap endonuclease activity|0017108||IEA;go_process=DNA replication%2C Okazaki fragment processing|0033567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417278.4;locus_tag=AC56_RS07865;product=flap endonuclease Xni;protein_id=WP_032278863.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	4341	5489	.	-	.	ID=gene-AC56_RS07860;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=AC56_RS07860;old_locus_tag=AC56_3167
NZ_JJLS01000240.1	Protein Homology	CDS	4341	5489	.	-	0	ID=cds-WP_000013604.1;Parent=gene-AC56_RS07860;Dbxref=GenBank:WP_000013604.1;Name=WP_000013604.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fucO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417279.2;locus_tag=AC56_RS07860;product=lactaldehyde reductase;protein_id=WP_000013604.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	5517	6164	.	-	.	ID=gene-AC56_RS07855;Name=fucA;gbkey=Gene;gene=fucA;gene_biotype=protein_coding;locus_tag=AC56_RS07855;old_locus_tag=AC56_3168
NZ_JJLS01000240.1	Protein Homology	CDS	5517	6164	.	-	0	ID=cds-WP_000440775.1;Parent=gene-AC56_RS07855;Dbxref=GenBank:WP_000440775.1;Name=WP_000440775.1;Ontology_term=GO:0006004,GO:0008270,GO:0008738;gbkey=CDS;gene=fucA;go_function=zinc ion binding|0008270||IEA,L-fuculose-phosphate aldolase activity|0008738||IEA;go_process=fucose metabolic process|0006004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311687.1;locus_tag=AC56_RS07855;product=L-fuculose-phosphate aldolase;protein_id=WP_000440775.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	6711	8027	.	+	.	ID=gene-AC56_RS07850;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=AC56_RS07850;old_locus_tag=AC56_3170
NZ_JJLS01000240.1	Protein Homology	CDS	6711	8027	.	+	0	ID=cds-WP_000528603.1;Parent=gene-AC56_RS07850;Dbxref=GenBank:WP_000528603.1;Name=WP_000528603.1;Ontology_term=GO:0015756,GO:0015150;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417281.1;locus_tag=AC56_RS07850;product=L-fucose:H+ symporter permease;protein_id=WP_000528603.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	8060	9835	.	+	.	ID=gene-AC56_RS07845;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=AC56_RS07845;old_locus_tag=AC56_3171
NZ_JJLS01000240.1	Protein Homology	CDS	8060	9835	.	+	0	ID=cds-WP_000724176.1;Parent=gene-AC56_RS07845;Dbxref=GenBank:WP_000724176.1;Name=WP_000724176.1;Ontology_term=GO:0019317,GO:0008736,GO:0030145,GO:0005737;gbkey=CDS;gene=fucI;go_component=cytoplasm|0005737||IEA;go_function=L-fucose isomerase activity|0008736||IEA,manganese ion binding|0030145||IEA;go_process=fucose catabolic process|0019317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417282.1;locus_tag=AC56_RS07845;product=L-fucose isomerase;protein_id=WP_000724176.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	9944	11362	.	+	.	ID=gene-AC56_RS07840;Name=fucK;gbkey=Gene;gene=fucK;gene_biotype=protein_coding;locus_tag=AC56_RS07840;old_locus_tag=AC56_3172
NZ_JJLS01000240.1	Protein Homology	CDS	9944	11362	.	+	0	ID=cds-WP_032278868.1;Parent=gene-AC56_RS07840;Dbxref=GenBank:WP_032278868.1;Name=WP_032278868.1;Ontology_term=GO:0042355,GO:0008737;gbkey=CDS;gene=fucK;go_function=L-fuculokinase activity|0008737||IEA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417283.2;locus_tag=AC56_RS07840;product=L-fuculokinase;protein_id=WP_032278868.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	11364	11786	.	+	.	ID=gene-AC56_RS07835;Name=fucU;gbkey=Gene;gene=fucU;gene_biotype=protein_coding;locus_tag=AC56_RS07835;old_locus_tag=AC56_3173
NZ_JJLS01000240.1	Protein Homology	CDS	11364	11786	.	+	0	ID=cds-WP_000920840.1;Parent=gene-AC56_RS07835;Dbxref=GenBank:WP_000920840.1;Name=WP_000920840.1;Ontology_term=GO:0042354,GO:0016854,GO:0042806;gbkey=CDS;gene=fucU;go_function=racemase and epimerase activity|0016854||IEA,fucose binding|0042806||IEA;go_process=L-fucose metabolic process|0042354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311691.1;locus_tag=AC56_RS07835;product=L-fucose mutarotase;protein_id=WP_000920840.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	11844	12575	.	+	.	ID=gene-AC56_RS07830;Name=fucR;gbkey=Gene;gene=fucR;gene_biotype=protein_coding;locus_tag=AC56_RS07830;old_locus_tag=AC56_3174
NZ_JJLS01000240.1	Protein Homology	CDS	11844	12575	.	+	0	ID=cds-WP_000642344.1;Parent=gene-AC56_RS07830;Dbxref=GenBank:WP_000642344.1;Name=WP_000642344.1;gbkey=CDS;gene=fucR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417285.1;locus_tag=AC56_RS07830;product=L-fucose operon activator;protein_id=WP_000642344.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	12619	13719	.	-	.	ID=gene-AC56_RS07825;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=AC56_RS07825;old_locus_tag=AC56_3175
NZ_JJLS01000240.1	Protein Homology	CDS	12619	13719	.	-	0	ID=cds-WP_001045520.1;Parent=gene-AC56_RS07825;Dbxref=GenBank:WP_001045520.1;Name=WP_001045520.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435097.1;locus_tag=AC56_RS07825;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=WP_001045520.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	13712	14107	.	-	.	ID=gene-AC56_RS07820;Name=ygdD;gbkey=Gene;gene=ygdD;gene_biotype=protein_coding;locus_tag=AC56_RS07820;old_locus_tag=AC56_3176
NZ_JJLS01000240.1	Protein Homology	CDS	13712	14107	.	-	0	ID=cds-WP_000203905.1;Parent=gene-AC56_RS07820;Dbxref=GenBank:WP_000203905.1;Name=WP_000203905.1;gbkey=CDS;gene=ygdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311694.1;locus_tag=AC56_RS07820;product=DUF423 domain-containing protein;protein_id=WP_000203905.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	14126	15043	.	-	.	ID=gene-AC56_RS07815;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=AC56_RS07815;old_locus_tag=AC56_3177
NZ_JJLS01000240.1	Protein Homology	CDS	14126	15043	.	-	0	ID=cds-WP_000044401.1;Parent=gene-AC56_RS07815;Dbxref=GenBank:WP_000044401.1;Name=WP_000044401.1;gbkey=CDS;gene=gcvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130970.1;locus_tag=AC56_RS07815;product=glycine cleavage system transcriptional regulator GcvA;protein_id=WP_000044401.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	15394	15621	.	-	.	ID=gene-AC56_RS07810;Name=ygdI;gbkey=Gene;gene=ygdI;gene_biotype=protein_coding;locus_tag=AC56_RS07810;old_locus_tag=AC56_3178
NZ_JJLS01000240.1	Protein Homology	CDS	15394	15621	.	-	0	ID=cds-WP_000750398.1;Parent=gene-AC56_RS07810;Dbxref=GenBank:WP_000750398.1;Name=WP_000750398.1;gbkey=CDS;gene=ygdI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417289.2;locus_tag=AC56_RS07810;product=YgdI/YgdR family lipoprotein;protein_id=WP_000750398.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	15813	17018	.	+	.	ID=gene-AC56_RS07805;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;locus_tag=AC56_RS07805;old_locus_tag=AC56_3179
NZ_JJLS01000240.1	Protein Homology	CDS	15813	17018	.	+	0	ID=cds-WP_032278865.1;Parent=gene-AC56_RS07805;Dbxref=GenBank:WP_032278865.1;Name=WP_032278865.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;gene=csdA;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417290.1;locus_tag=AC56_RS07805;product=cysteine desulfurase CsdA;protein_id=WP_032278865.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	17018	17461	.	+	.	ID=gene-AC56_RS07800;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=AC56_RS07800;old_locus_tag=AC56_3180
NZ_JJLS01000240.1	Protein Homology	CDS	17018	17461	.	+	0	ID=cds-WP_032278867.1;Parent=gene-AC56_RS07800;Dbxref=GenBank:WP_032278867.1;Name=WP_032278867.1;gbkey=CDS;gene=csdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311698.1;locus_tag=AC56_RS07800;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=WP_032278867.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	17512	18318	.	-	.	ID=gene-AC56_RS07795;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=AC56_RS07795;old_locus_tag=AC56_3181
NZ_JJLS01000240.1	Protein Homology	CDS	17512	18318	.	-	0	ID=cds-WP_000117728.1;Parent=gene-AC56_RS07795;Dbxref=GenBank:WP_000117728.1;Name=WP_000117728.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417292.1;locus_tag=AC56_RS07795;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WP_000117728.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	18557	19654	.	-	.	ID=gene-AC56_RS07790;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=AC56_RS07790;old_locus_tag=AC56_3182
NZ_JJLS01000240.1	Protein Homology	CDS	18557	19654	.	-	0	ID=cds-WP_000678646.1-2;Parent=gene-AC56_RS07790;Dbxref=GenBank:WP_000678646.1;Name=WP_000678646.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;gene=mltA;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785702.1;locus_tag=AC56_RS07790;product=murein transglycosylase A;protein_id=WP_000678646.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	19863	19939	.	+	.	ID=gene-AC56_RS07785;Name=AC56_RS07785;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS07785;old_locus_tag=AC56_3183
NZ_JJLS01000240.1	tRNAscan-SE	tRNA	19863	19939	.	+	.	ID=rna-AC56_RS07785;Parent=gene-AC56_RS07785;anticodon=(pos:19897..19899);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS07785;product=tRNA-Met
NZ_JJLS01000240.1	tRNAscan-SE	exon	19863	19939	.	+	.	ID=exon-AC56_RS07785-1;Parent=rna-AC56_RS07785;anticodon=(pos:19897..19899);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS07785;product=tRNA-Met
NZ_JJLS01000240.1	RefSeq	gene	19973	20049	.	+	.	ID=gene-AC56_RS07780;Name=AC56_RS07780;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS07780;old_locus_tag=AC56_3184
NZ_JJLS01000240.1	tRNAscan-SE	tRNA	19973	20049	.	+	.	ID=rna-AC56_RS07780;Parent=gene-AC56_RS07780;anticodon=(pos:20007..20009);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS07780;product=tRNA-Met
NZ_JJLS01000240.1	tRNAscan-SE	exon	19973	20049	.	+	.	ID=exon-AC56_RS07780-1;Parent=rna-AC56_RS07780;anticodon=(pos:20007..20009);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS07780;product=tRNA-Met
NZ_JJLS01000240.1	RefSeq	gene	20083	20159	.	+	.	ID=gene-AC56_RS07775;Name=AC56_RS07775;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS07775;old_locus_tag=AC56_3185
NZ_JJLS01000240.1	tRNAscan-SE	tRNA	20083	20159	.	+	.	ID=rna-AC56_RS07775;Parent=gene-AC56_RS07775;anticodon=(pos:20117..20119);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS07775;product=tRNA-Met
NZ_JJLS01000240.1	tRNAscan-SE	exon	20083	20159	.	+	.	ID=exon-AC56_RS07775-1;Parent=rna-AC56_RS07775;anticodon=(pos:20117..20119);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS07775;product=tRNA-Met
NZ_JJLS01000240.1	RefSeq	gene	20234	21487	.	-	.	ID=gene-AC56_RS07770;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=AC56_RS07770;old_locus_tag=AC56_3186
NZ_JJLS01000240.1	Protein Homology	CDS	20234	21487	.	-	0	ID=cds-WP_032278869.1;Parent=gene-AC56_RS07770;Dbxref=GenBank:WP_032278869.1;Name=WP_032278869.1;Note=Like AmiA%2C dependent on TAT (Twin-Arginine Translocation) system for export.;gbkey=CDS;gene=amiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311701.2;locus_tag=AC56_RS07770;product=N-acetylmuramoyl-L-alanine amidase AmiC;protein_id=WP_032278869.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	21719	23050	.	+	.	ID=gene-AC56_RS07765;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=AC56_RS07765;old_locus_tag=AC56_3187
NZ_JJLS01000240.1	Protein Homology	CDS	21719	23050	.	+	0	ID=cds-WP_000237947.1;Parent=gene-AC56_RS07765;Dbxref=GenBank:WP_000237947.1;Name=WP_000237947.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311702.1;locus_tag=AC56_RS07765;product=amino-acid N-acetyltransferase;protein_id=WP_000237947.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	23112	24938	.	-	.	ID=gene-AC56_RS07760;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=AC56_RS07760;old_locus_tag=AC56_3188
NZ_JJLS01000240.1	Protein Homology	CDS	23112	24938	.	-	0	ID=cds-WP_000775931.1;Parent=gene-AC56_RS07760;Dbxref=GenBank:WP_000775931.1;Name=WP_000775931.1;Ontology_term=GO:0006302,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=double-strand break repair|0006302||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417296.1;locus_tag=AC56_RS07760;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_000775931.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	24938	28480	.	-	.	ID=gene-AC56_RS07755;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=AC56_RS07755;old_locus_tag=AC56_3189
NZ_JJLS01000240.1	Protein Homology	CDS	24938	28480	.	-	0	ID=cds-WP_001514514.1;Parent=gene-AC56_RS07755;Dbxref=GenBank:WP_001514514.1;Name=WP_001514514.1;Ontology_term=GO:0006281,GO:0003677,GO:0003678,GO:0005524,GO:0008854;gbkey=CDS;gene=recB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417297.1;locus_tag=AC56_RS07755;product=exodeoxyribonuclease V subunit beta;protein_id=WP_001514514.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	28473	31361	.	-	.	ID=gene-AC56_RS07750;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=protein_coding;locus_tag=AC56_RS07750;old_locus_tag=AC56_3190
NZ_JJLS01000240.1	Protein Homology	CDS	28473	31361	.	-	0	ID=cds-WP_032278873.1;Parent=gene-AC56_RS07750;Dbxref=GenBank:WP_032278873.1;Name=WP_032278873.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;gene=ptrA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417298.1;locus_tag=AC56_RS07750;product=pitrilysin;protein_id=WP_032278873.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	31537	34905	.	-	.	ID=gene-AC56_RS07745;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=AC56_RS07745;old_locus_tag=AC56_3191
NZ_JJLS01000240.1	Protein Homology	CDS	31537	34905	.	-	0	ID=cds-WP_000946947.1;Parent=gene-AC56_RS07745;Dbxref=GenBank:WP_000946947.1;Name=WP_000946947.1;Ontology_term=GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417299.1;locus_tag=AC56_RS07745;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_000946947.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	34918	35241	.	-	.	ID=gene-AC56_RS07740;Name=ppdC;gbkey=Gene;gene=ppdC;gene_biotype=protein_coding;locus_tag=AC56_RS07740;old_locus_tag=AC56_3192
NZ_JJLS01000240.1	Protein Homology	CDS	34918	35241	.	-	0	ID=cds-WP_001276478.1;Parent=gene-AC56_RS07740;Dbxref=GenBank:WP_001276478.1;Name=WP_001276478.1;gbkey=CDS;gene=ppdC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417300.1;locus_tag=AC56_RS07740;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_001276478.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	35226	35633	.	-	.	ID=gene-AC56_RS07735;Name=ygdB;gbkey=Gene;gene=ygdB;gene_biotype=protein_coding;locus_tag=AC56_RS07735;old_locus_tag=AC56_3193
NZ_JJLS01000240.1	Protein Homology	CDS	35226	35633	.	-	0	ID=cds-WP_001078387.1;Parent=gene-AC56_RS07735;Dbxref=GenBank:WP_001078387.1;Name=WP_001078387.1;gbkey=CDS;gene=ygdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417301.4;locus_tag=AC56_RS07735;product=DUF2509 family protein;protein_id=WP_001078387.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	35630	36193	.	-	.	ID=gene-AC56_RS07730;Name=ppdB;gbkey=Gene;gene=ppdB;gene_biotype=protein_coding;locus_tag=AC56_RS07730;old_locus_tag=AC56_3194
NZ_JJLS01000240.1	Protein Homology	CDS	35630	36193	.	-	0	ID=cds-WP_001144297.1;Parent=gene-AC56_RS07730;Dbxref=GenBank:WP_001144297.1;Name=WP_001144297.1;gbkey=CDS;gene=ppdB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439276.1;locus_tag=AC56_RS07730;product=prepilin peptidase-dependent protein;protein_id=WP_001144297.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	36184	36654	.	-	.	ID=gene-AC56_RS07725;Name=ppdA;gbkey=Gene;gene=ppdA;gene_biotype=protein_coding;locus_tag=AC56_RS07725;old_locus_tag=AC56_3195
NZ_JJLS01000240.1	Protein Homology	CDS	36184	36654	.	-	0	ID=cds-WP_000857056.1;Parent=gene-AC56_RS07725;Dbxref=GenBank:WP_000857056.1;Name=WP_000857056.1;gbkey=CDS;gene=ppdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417303.1;locus_tag=AC56_RS07725;product=prepilin peptidase-dependent protein;protein_id=WP_000857056.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	36839	37633	.	-	.	ID=gene-AC56_RS07720;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=AC56_RS07720;old_locus_tag=AC56_3196
NZ_JJLS01000240.1	Protein Homology	CDS	36839	37633	.	-	0	ID=cds-WP_000816232.1;Parent=gene-AC56_RS07720;Dbxref=GenBank:WP_000816232.1;Name=WP_000816232.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1;locus_tag=AC56_RS07720;product=thymidylate synthase;protein_id=WP_000816232.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	37640	38515	.	-	.	ID=gene-AC56_RS07715;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=AC56_RS07715;old_locus_tag=AC56_3197
NZ_JJLS01000240.1	Protein Homology	CDS	37640	38515	.	-	0	ID=cds-WP_000204658.1;Parent=gene-AC56_RS07715;Dbxref=GenBank:WP_000204658.1;Name=WP_000204658.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311712.1;locus_tag=AC56_RS07715;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_000204658.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	38666	40912	.	-	.	ID=gene-AC56_RS07710;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=AC56_RS07710;old_locus_tag=AC56_3198
NZ_JJLS01000240.1	Protein Homology	CDS	38666	40912	.	-	0	ID=cds-WP_000957914.1;Parent=gene-AC56_RS07710;Dbxref=GenBank:WP_000957914.1;Name=WP_000957914.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311713.1;locus_tag=AC56_RS07710;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_000957914.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	40925	41455	.	-	.	ID=gene-AC56_RS07705;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=AC56_RS07705;old_locus_tag=AC56_3199
NZ_JJLS01000240.1	Protein Homology	CDS	40925	41455	.	-	0	ID=cds-WP_000564489.1;Parent=gene-AC56_RS07705;Dbxref=GenBank:WP_000564489.1;Name=WP_000564489.1;Ontology_term=GO:0016787;gbkey=CDS;gene=rppH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001655775.1;locus_tag=AC56_RS07705;product=RNA pyrophosphohydrolase;protein_id=WP_000564489.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	41808	41954	.	-	.	ID=gene-AC56_RS33575;Name=ygdT;gbkey=Gene;gene=ygdT;gene_biotype=protein_coding;locus_tag=AC56_RS33575
NZ_JJLS01000240.1	Protein Homology	CDS	41808	41954	.	-	0	ID=cds-WP_000953278.1;Parent=gene-AC56_RS33575;Dbxref=GenBank:WP_000953278.1;Name=WP_000953278.1;gbkey=CDS;gene=ygdT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502650.1;locus_tag=AC56_RS33575;product=protein YgdT;protein_id=WP_000953278.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	42140	42829	.	+	.	ID=gene-AC56_RS07700;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=AC56_RS07700;old_locus_tag=AC56_3200
NZ_JJLS01000240.1	Protein Homology	CDS	42140	42829	.	+	0	ID=cds-WP_000082201.1;Parent=gene-AC56_RS07700;Dbxref=GenBank:WP_000082201.1;Name=WP_000082201.1;Ontology_term=GO:0006304,GO:0004519;gbkey=CDS;gene=mutH;go_function=endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417308.1;locus_tag=AC56_RS07700;product=DNA mismatch repair endonuclease MutH;protein_id=WP_000082201.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	42898	43611	.	+	.	ID=gene-AC56_RS07695;Name=ygdQ;gbkey=Gene;gene=ygdQ;gene_biotype=protein_coding;locus_tag=AC56_RS07695;old_locus_tag=AC56_3201
NZ_JJLS01000240.1	Protein Homology	CDS	42898	43611	.	+	0	ID=cds-WP_032278875.1;Parent=gene-AC56_RS07695;Dbxref=GenBank:WP_032278875.1;Name=WP_032278875.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;gene=ygdQ;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311716.1;locus_tag=AC56_RS07695;product=TerC family protein;protein_id=WP_032278875.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	43749	43967	.	+	.	ID=gene-AC56_RS07690;Name=ygdR;gbkey=Gene;gene=ygdR;gene_biotype=protein_coding;locus_tag=AC56_RS07690;old_locus_tag=AC56_3202
NZ_JJLS01000240.1	Protein Homology	CDS	43749	43967	.	+	0	ID=cds-WP_000758655.1;Parent=gene-AC56_RS07690;Dbxref=GenBank:WP_000758655.1;Name=WP_000758655.1;gbkey=CDS;gene=ygdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311717.1;locus_tag=AC56_RS07690;product=lipoprotein YgdR;protein_id=WP_000758655.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	44075	45115	.	+	.	ID=gene-AC56_RS07685;Name=tas;gbkey=Gene;gene=tas;gene_biotype=protein_coding;locus_tag=AC56_RS07685;old_locus_tag=AC56_3203
NZ_JJLS01000240.1	Protein Homology	CDS	44075	45115	.	+	0	ID=cds-WP_001199295.1;Parent=gene-AC56_RS07685;Dbxref=GenBank:WP_001199295.1;Name=WP_001199295.1;Ontology_term=GO:0047834;gbkey=CDS;gene=tas;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417311.1;locus_tag=AC56_RS07685;product=NADP(H)-dependent aldo-keto reductase;protein_id=WP_001199295.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	45147	46340	.	-	.	ID=gene-AC56_RS07680;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=AC56_RS07680;old_locus_tag=AC56_3204
NZ_JJLS01000240.1	Protein Homology	CDS	45147	46340	.	-	0	ID=cds-WP_000004618.1;Parent=gene-AC56_RS07680;Dbxref=GenBank:WP_000004618.1;Name=WP_000004618.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lplT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417312.1;locus_tag=AC56_RS07680;product=lysophospholipid transporter LplT;protein_id=WP_000004618.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	46333	48492	.	-	.	ID=gene-AC56_RS07675;Name=aas;gbkey=Gene;gene=aas;gene_biotype=protein_coding;locus_tag=AC56_RS07675;old_locus_tag=AC56_3205
NZ_JJLS01000240.1	Protein Homology	CDS	46333	48492	.	-	0	ID=cds-WP_000899049.1;Parent=gene-AC56_RS07675;Dbxref=GenBank:WP_000899049.1;Name=WP_000899049.1;Ontology_term=GO:0006631,GO:0008654,GO:0008779,GO:0008922;gbkey=CDS;gene=aas;go_function=acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase activity|0008779||IEA,long-chain fatty acid [acyl-carrier-protein] ligase activity|0008922||IEA;go_process=fatty acid metabolic process|0006631||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417313.1;locus_tag=AC56_RS07675;product=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;protein_id=WP_000899049.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	49078	50109	.	+	.	ID=gene-AC56_RS07670;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=AC56_RS07670;old_locus_tag=AC56_3206
NZ_JJLS01000240.1	Protein Homology	CDS	49078	50109	.	+	0	ID=cds-WP_032278876.1;Parent=gene-AC56_RS07670;Dbxref=GenBank:WP_032278876.1;Name=WP_032278876.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417314.1;locus_tag=AC56_RS07670;product=HTH-type transcriptional regulator GalR;protein_id=WP_032278876.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	50116	51378	.	-	.	ID=gene-AC56_RS07665;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=AC56_RS07665;old_locus_tag=AC56_3207
NZ_JJLS01000240.1	Protein Homology	CDS	50116	51378	.	-	0	ID=cds-WP_001120711.1;Parent=gene-AC56_RS07665;Dbxref=GenBank:WP_001120711.1;Name=WP_001120711.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417315.1;locus_tag=AC56_RS07665;product=diaminopimelate decarboxylase;protein_id=WP_001120711.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	51500	52435	.	+	.	ID=gene-AC56_RS07660;Name=lysR;gbkey=Gene;gene=lysR;gene_biotype=protein_coding;locus_tag=AC56_RS07660;old_locus_tag=AC56_3208
NZ_JJLS01000240.1	Protein Homology	CDS	51500	52435	.	+	0	ID=cds-WP_000741828.1;Parent=gene-AC56_RS07660;Dbxref=GenBank:WP_000741828.1;Name=WP_000741828.1;gbkey=CDS;gene=lysR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417316.1;locus_tag=AC56_RS07660;product=DNA-binding transcriptional regulator LysR;protein_id=WP_000741828.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	52422	53114	.	-	.	ID=gene-AC56_RS07655;Name=ygeA;gbkey=Gene;gene=ygeA;gene_biotype=protein_coding;locus_tag=AC56_RS07655;old_locus_tag=AC56_3209
NZ_JJLS01000240.1	Protein Homology	CDS	52422	53114	.	-	0	ID=cds-WP_000848664.1;Parent=gene-AC56_RS07655;Dbxref=GenBank:WP_000848664.1;Name=WP_000848664.1;gbkey=CDS;gene=ygeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311724.1;locus_tag=AC56_RS07655;product=amino acid racemase;protein_id=WP_000848664.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	53243	54661	.	-	.	ID=gene-AC56_RS07650;Name=araE;gbkey=Gene;gene=araE;gene_biotype=protein_coding;locus_tag=AC56_RS07650;old_locus_tag=AC56_3210
NZ_JJLS01000240.1	Protein Homology	CDS	53243	54661	.	-	0	ID=cds-WP_000256437.1;Parent=gene-AC56_RS07650;Dbxref=GenBank:WP_000256437.1;Name=WP_000256437.1;gbkey=CDS;gene=araE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311725.1;locus_tag=AC56_RS07650;product=arabinose-proton symporter AraE;protein_id=WP_000256437.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	54976	55737	.	-	.	ID=gene-AC56_RS07645;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=AC56_RS07645;old_locus_tag=AC56_3211
NZ_JJLS01000240.1	Protein Homology	CDS	54976	55737	.	-	0	ID=cds-WP_000603502.1;Parent=gene-AC56_RS07645;Dbxref=GenBank:WP_000603502.1;Name=WP_000603502.1;Ontology_term=GO:0000272,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417319.1;locus_tag=AC56_RS07645;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=WP_000603502.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	55767	56603	.	-	.	ID=gene-AC56_RS07640;Name=kduI;gbkey=Gene;gene=kduI;gene_biotype=protein_coding;locus_tag=AC56_RS07640;old_locus_tag=AC56_3212
NZ_JJLS01000240.1	Protein Homology	CDS	55767	56603	.	-	0	ID=cds-WP_000383237.1;Parent=gene-AC56_RS07640;Dbxref=GenBank:WP_000383237.1;Name=WP_000383237.1;Ontology_term=GO:0045490,GO:0008697;gbkey=CDS;gene=kduI;go_function=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity|0008697||IEA;go_process=pectin catabolic process|0045490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417320.1;locus_tag=AC56_RS07640;product=5-dehydro-4-deoxy-D-glucuronate isomerase;protein_id=WP_000383237.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	56890	58071	.	-	.	ID=gene-AC56_RS07635;Name=yqeF;gbkey=Gene;gene=yqeF;gene_biotype=protein_coding;locus_tag=AC56_RS07635;old_locus_tag=AC56_3213
NZ_JJLS01000240.1	Protein Homology	CDS	56890	58071	.	-	0	ID=cds-WP_000656029.1;Parent=gene-AC56_RS07635;Dbxref=GenBank:WP_000656029.1;Name=WP_000656029.1;Ontology_term=GO:0003985;gbkey=CDS;gene=yqeF;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417321.2;locus_tag=AC56_RS07635;product=acetyl-CoA C-acetyltransferase;protein_id=WP_000656029.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	gene	58326	59555	.	+	.	ID=gene-AC56_RS07630;Name=yqeG;gbkey=Gene;gene=yqeG;gene_biotype=protein_coding;locus_tag=AC56_RS07630;old_locus_tag=AC56_3214
NZ_JJLS01000240.1	Protein Homology	CDS	58326	59555	.	+	0	ID=cds-WP_000065950.1;Parent=gene-AC56_RS07630;Dbxref=GenBank:WP_000065950.1;Name=WP_000065950.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;gene=yqeG;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311729.1;locus_tag=AC56_RS07630;product=amino acid permease;protein_id=WP_000065950.1;transl_table=11
NZ_JJLS01000240.1	RefSeq	pseudogene	59669	60366	.	-	.	ID=gene-AC56_RS31520;Name=AC56_RS31520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS31520;pseudo=true
NZ_JJLS01000240.1	Protein Homology	CDS	59669	60366	.	-	0	ID=cds-AC56_RS31520;Parent=gene-AC56_RS31520;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS31520;product=IS1 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000241.1 1 2432
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000241.1	RefSeq	region	1	2432	.	+	.	ID=NZ_JJLS01000241.1:1..2432;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000241.1	RefSeq	pseudogene	1	476	.	-	.	ID=gene-AC56_RS31525;Name=AC56_RS31525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS31525;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000241.1	Protein Homology	CDS	1	476	.	-	0	ID=cds-AC56_RS31525;Parent=gene-AC56_RS31525;Note=frameshifted%3B internal stop%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS31525;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000241.1	RefSeq	gene	902	1534	.	+	.	ID=gene-AC56_RS07610;Name=yqeH;gbkey=Gene;gene=yqeH;gene_biotype=protein_coding;locus_tag=AC56_RS07610;old_locus_tag=AC56_3219
NZ_JJLS01000241.1	Protein Homology	CDS	902	1534	.	+	0	ID=cds-WP_001305805.1;Parent=gene-AC56_RS07610;Dbxref=GenBank:WP_001305805.1;Name=WP_001305805.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=yqeH;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417323.2;locus_tag=AC56_RS07610;product=helix-turn-helix transcriptional regulator;protein_id=WP_001305805.1;transl_table=11
NZ_JJLS01000241.1	RefSeq	pseudogene	1868	1969	.	+	.	ID=gene-AC56_RS31535;Name=AC56_RS31535;end_range=1969,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS31535;old_locus_tag=AC56_3221;partial=true;pseudo=true
NZ_JJLS01000241.1	Protein Homology	CDS	1868	1969	.	+	0	ID=cds-AC56_RS31535;Parent=gene-AC56_RS31535;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1969,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311731.1;locus_tag=AC56_RS31535;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_JJLS01000241.1	RefSeq	pseudogene	2026	2432	.	-	.	ID=gene-AC56_RS07605;Name=AC56_RS07605;end_range=2432,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS07605;old_locus_tag=AC56_3222;partial=true;pseudo=true
NZ_JJLS01000241.1	Protein Homology	CDS	2026	2432	.	-	2	ID=cds-AC56_RS07605;Parent=gene-AC56_RS07605;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=2432,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS07605;partial=true;product=IS5-like element IS903B family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000242.1 1 2664
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000242.1	RefSeq	region	1	2664	.	+	.	ID=NZ_JJLS01000242.1:1..2664;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000242.1	RefSeq	gene	1	460	.	+	.	ID=gene-AC56_RS07600;Name=AC56_RS07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS07600;old_locus_tag=AC56_3223;partial=true;start_range=.,1
NZ_JJLS01000242.1	Protein Homology	CDS	1	460	.	+	1	ID=cds-WP_032282705.1-2;Parent=gene-AC56_RS07600;Dbxref=GenBank:WP_032282705.1;Name=WP_032282705.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=AC56_RS07600;partial=true;product=IS1 family transposase;protein_id=WP_032282705.1;start_range=.,1;transl_table=11
NZ_JJLS01000242.1	RefSeq	gene	646	2103	.	+	.	ID=gene-AC56_RS07595;Name=trkG;gbkey=Gene;gene=trkG;gene_biotype=protein_coding;locus_tag=AC56_RS07595;old_locus_tag=AC56_3224
NZ_JJLS01000242.1	Protein Homology	CDS	646	2103	.	+	0	ID=cds-WP_001097895.1;Parent=gene-AC56_RS07595;Dbxref=GenBank:WP_001097895.1;Name=WP_001097895.1;gbkey=CDS;gene=trkG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415881.1;locus_tag=AC56_RS07595;product=Trk system potassium transporter TrkG;protein_id=WP_001097895.1;transl_table=11
NZ_JJLS01000242.1	RefSeq	gene	2216	2664	.	+	.	ID=gene-AC56_RS07590;Name=AC56_RS07590;end_range=2664,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS07590;old_locus_tag=AC56_3225;partial=true
NZ_JJLS01000242.1	Protein Homology	CDS	2216	2664	.	+	0	ID=cds-WP_032282547.1-2;Parent=gene-AC56_RS07590;Dbxref=GenBank:WP_032282547.1;Name=WP_032282547.1;Ontology_term=GO:0004803;end_range=2664,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS07590;partial=true;product=IS5 family transposase;protein_id=WP_032282547.1;transl_table=11
##sequence-region NZ_JJLS01000243.1 1 2838
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000243.1	RefSeq	region	1	2838	.	+	.	ID=NZ_JJLS01000243.1:1..2838;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000243.1	RefSeq	gene	1	438	.	-	.	ID=gene-AC56_RS07585;Name=AC56_RS07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS07585;old_locus_tag=AC56_3226;partial=true;start_range=.,1
NZ_JJLS01000243.1	Protein Homology	CDS	1	438	.	-	0	ID=cds-WP_032278941.1-2;Parent=gene-AC56_RS07585;Dbxref=GenBank:WP_032278941.1;Name=WP_032278941.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS07585;partial=true;product=IS5 family transposase;protein_id=WP_032278941.1;start_range=.,1;transl_table=11
NZ_JJLS01000243.1	RefSeq	pseudogene	471	1079	.	-	.	ID=gene-AC56_RS07580;Name=ygeQ;gbkey=Gene;gene=ygeQ;gene_biotype=pseudogene;locus_tag=AC56_RS07580;old_locus_tag=AC56_3227;partial=true;pseudo=true;start_range=.,471
NZ_JJLS01000243.1	Protein Homology	CDS	471	1079	.	-	0	ID=cds-AC56_RS07580;Parent=gene-AC56_RS07580;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=ygeQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001338841.1;locus_tag=AC56_RS07580;partial=true;product=protein YgeQ;pseudo=true;start_range=.,471;transl_table=11
NZ_JJLS01000243.1	RefSeq	gene	1301	1374	.	-	.	ID=gene-AC56_RS07575;Name=AC56_RS07575;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS07575;old_locus_tag=AC56_3228
NZ_JJLS01000243.1	tRNAscan-SE	tRNA	1301	1374	.	-	.	ID=rna-AC56_RS07575;Parent=gene-AC56_RS07575;anticodon=(pos:complement(1340..1342));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS07575;product=tRNA-Gly
NZ_JJLS01000243.1	tRNAscan-SE	exon	1301	1374	.	-	.	ID=exon-AC56_RS07575-1;Parent=rna-AC56_RS07575;anticodon=(pos:complement(1340..1342));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS07575;product=tRNA-Gly
NZ_JJLS01000243.1	RefSeq	gene	1453	2208	.	-	.	ID=gene-AC56_RS07570;Name=actS;gbkey=Gene;gene=actS;gene_biotype=protein_coding;locus_tag=AC56_RS07570;old_locus_tag=AC56_3229
NZ_JJLS01000243.1	Protein Homology	CDS	1453	2208	.	-	0	ID=cds-WP_001301085.1;Parent=gene-AC56_RS07570;Dbxref=GenBank:WP_001301085.1;Name=WP_001301085.1;gbkey=CDS;gene=actS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417341.4;locus_tag=AC56_RS07570;product=amidase activator ActS;protein_id=WP_001301085.1;transl_table=11
NZ_JJLS01000243.1	RefSeq	gene	2530	2838	.	+	.	ID=gene-AC56_RS0126815;Name=AC56_RS0126815;end_range=2838,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0126815;old_locus_tag=AC56_3230;partial=true
NZ_JJLS01000243.1	Protein Homology	CDS	2530	2838	.	+	0	ID=cds-WP_032255384.1-2;Parent=gene-AC56_RS0126815;Dbxref=GenBank:WP_032255384.1;Name=WP_032255384.1;end_range=2838,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS0126815;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032255384.1;transl_table=11
##sequence-region NZ_JJLS01000244.1 1 29658
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000244.1	RefSeq	region	1	29658	.	+	.	ID=NZ_JJLS01000244.1:1..29658;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000244.1	RefSeq	pseudogene	1	420	.	+	.	ID=gene-AC56_RS07565;Name=AC56_RS07565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS07565;old_locus_tag=AC56_3231;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000244.1	Protein Homology	CDS	1	420	.	+	0	ID=cds-AC56_RS07565;Parent=gene-AC56_RS07565;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS07565;partial=true;product=IS5-like element IS903B family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000244.1	RefSeq	pseudogene	476	802	.	-	.	ID=gene-AC56_RS07560;Name=AC56_RS07560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS07560;old_locus_tag=AC56_3232;partial=true;pseudo=true;start_range=.,476
NZ_JJLS01000244.1	Protein Homology	CDS	476	802	.	-	0	ID=cds-AC56_RS07560;Parent=gene-AC56_RS07560;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417363.2;locus_tag=AC56_RS07560;partial=true;product=4Fe-4S dicluster domain-containing protein;pseudo=true;start_range=.,476;transl_table=11
NZ_JJLS01000244.1	RefSeq	gene	1238	2686	.	+	.	ID=gene-AC56_RS07555;Name=uacT;gbkey=Gene;gene=uacT;gene_biotype=protein_coding;locus_tag=AC56_RS07555;old_locus_tag=AC56_3233
NZ_JJLS01000244.1	Protein Homology	CDS	1238	2686	.	+	0	ID=cds-WP_001295374.1;Parent=gene-AC56_RS07555;Dbxref=GenBank:WP_001295374.1;Name=WP_001295374.1;gbkey=CDS;gene=uacT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417364.2;locus_tag=AC56_RS07555;product=urate/proton symporter UacT;protein_id=WP_001295374.1;transl_table=11
NZ_JJLS01000244.1	RefSeq	gene	2688	2813	.	+	.	ID=gene-AC56_RS07550;Name=yqfG;gbkey=Gene;gene=yqfG;gene_biotype=protein_coding;locus_tag=AC56_RS07550;old_locus_tag=AC56_3234
NZ_JJLS01000244.1	Protein Homology	CDS	2688	2813	.	+	0	ID=cds-WP_001050745.1;Parent=gene-AC56_RS07550;Dbxref=GenBank:WP_001050745.1;Name=WP_001050745.1;gbkey=CDS;gene=yqfG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791254.1;locus_tag=AC56_RS07550;product=protein YqfG;protein_id=WP_001050745.1;transl_table=11
NZ_JJLS01000244.1	RefSeq	gene	2810	2881	.	-	.	ID=gene-AC56_RS32805;Name=AC56_RS32805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS32805
NZ_JJLS01000244.1	Protein Homology	CDS	2810	2881	.	-	0	ID=cds-WP_120795390.1;Parent=gene-AC56_RS32805;Dbxref=GenBank:WP_120795390.1;Name=WP_120795390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518812.1;locus_tag=AC56_RS32805;product=protein YqfH;protein_id=WP_120795390.1;transl_table=11
NZ_JJLS01000244.1	RefSeq	gene	2936	3484	.	+	.	ID=gene-AC56_RS07545;Name=idi;gbkey=Gene;gene=idi;gene_biotype=protein_coding;locus_tag=AC56_RS07545;old_locus_tag=AC56_3235
NZ_JJLS01000244.1	Protein Homology	CDS	2936	3484	.	+	0	ID=cds-WP_001192790.1;Parent=gene-AC56_RS07545;Dbxref=GenBank:WP_001192790.1;Name=WP_001192790.1;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=idi;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311788.1;locus_tag=AC56_RS07545;product=isopentenyl-diphosphate Delta-isomerase;protein_id=WP_001192790.1;transl_table=11
NZ_JJLS01000244.1	RefSeq	gene	3527	5044	.	-	.	ID=gene-AC56_RS07540;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=AC56_RS07540;old_locus_tag=AC56_3236
NZ_JJLS01000244.1	Protein Homology	CDS	3527	5044	.	-	0	ID=cds-WP_000003071.1;Parent=gene-AC56_RS07540;Dbxref=GenBank:WP_000003071.1;Name=WP_000003071.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=AC56_RS07540;product=lysine--tRNA ligase;protein_id=WP_000003071.1;transl_table=11
NZ_JJLS01000244.1	RefSeq	gene	5054	6152	.	-	.	ID=gene-AC56_RS07535;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=AC56_RS07535;old_locus_tag=AC56_3237
NZ_JJLS01000244.1	Protein Homology	CDS	6078	6152	.	-	0	ID=cds-WP_001701073.1;Parent=gene-AC56_RS07535;Dbxref=GenBank:WP_001701073.1;Name=WP_001701073.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=AC56_RS07535;product=peptide chain release factor 2;protein_id=WP_001701073.1;transl_table=11
NZ_JJLS01000244.1	Protein Homology	CDS	5054	6076	.	-	0	ID=cds-WP_001701073.1;Parent=gene-AC56_RS07535;Dbxref=GenBank:WP_001701073.1;Name=WP_001701073.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=AC56_RS07535;product=peptide chain release factor 2;protein_id=WP_001701073.1;transl_table=11
NZ_JJLS01000244.1	RefSeq	gene	6243	7976	.	-	.	ID=gene-AC56_RS07530;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=AC56_RS07530;old_locus_tag=AC56_3239
NZ_JJLS01000244.1	Protein Homology	CDS	6243	7976	.	-	0	ID=cds-WP_032220756.1;Parent=gene-AC56_RS07530;Dbxref=GenBank:WP_032220756.1;Name=WP_032220756.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311791.1;locus_tag=AC56_RS07530;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_032220756.1;transl_table=11
NZ_JJLS01000244.1	RefSeq	gene	7982	8692	.	-	.	ID=gene-AC56_RS07525;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=AC56_RS07525;old_locus_tag=AC56_3240
NZ_JJLS01000244.1	Protein Homology	CDS	7982	8692	.	-	0	ID=cds-WP_000715214.1;Parent=gene-AC56_RS07525;Dbxref=GenBank:WP_000715214.1;Name=WP_000715214.1;Ontology_term=GO:0042597;gbkey=CDS;gene=dsbC;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311792.1;locus_tag=AC56_RS07525;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=WP_000715214.1;transl_table=11
NZ_JJLS01000244.1	RefSeq	gene	8717	9613	.	-	.	ID=gene-AC56_RS07520;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=AC56_RS07520;old_locus_tag=AC56_3241
NZ_JJLS01000244.1	Protein Homology	CDS	8717	9613	.	-	0	ID=cds-WP_000806638.1;Parent=gene-AC56_RS07520;Dbxref=GenBank:WP_000806638.1;Name=WP_000806638.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417370.1;locus_tag=AC56_RS07520;product=site-specific tyrosine recombinase XerD;protein_id=WP_000806638.1;transl_table=11
NZ_JJLS01000244.1	RefSeq	gene	9725	10246	.	+	.	ID=gene-AC56_RS07515;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;locus_tag=AC56_RS07515;old_locus_tag=AC56_3242
NZ_JJLS01000244.1	Protein Homology	CDS	9725	10246	.	+	0	ID=cds-WP_001055874.1;Parent=gene-AC56_RS07515;Dbxref=GenBank:WP_001055874.1;Name=WP_001055874.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;gene=fldB;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311794.1;locus_tag=AC56_RS07515;product=flavodoxin FldB;protein_id=WP_001055874.1;transl_table=11
NZ_JJLS01000244.1	RefSeq	gene	10286	10693	.	-	.	ID=gene-AC56_RS07510;Name=ygfX;gbkey=Gene;gene=ygfX;gene_biotype=protein_coding;locus_tag=AC56_RS07510;old_locus_tag=AC56_3243
NZ_JJLS01000244.1	Protein Homology	CDS	10286	10693	.	-	0	ID=cds-WP_000244781.1;Parent=gene-AC56_RS07510;Dbxref=GenBank:WP_000244781.1;Name=WP_000244781.1;gbkey=CDS;gene=ygfX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311795.1;locus_tag=AC56_RS07510;product=protein YgfX;protein_id=WP_000244781.1;transl_table=11
NZ_JJLS01000244.1	RefSeq	gene	10674	10940	.	-	.	ID=gene-AC56_RS07505;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;locus_tag=AC56_RS07505;old_locus_tag=AC56_3244
NZ_JJLS01000244.1	Protein Homology	CDS	10674	10940	.	-	0	ID=cds-WP_000354046.1;Parent=gene-AC56_RS07505;Dbxref=GenBank:WP_000354046.1;Name=WP_000354046.1;gbkey=CDS;gene=sdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354044.1;locus_tag=AC56_RS07505;product=FAD assembly factor SdhE;protein_id=WP_000354046.1;transl_table=11
NZ_JJLS01000244.1	RefSeq	gene	11183	12163	.	+	.	ID=gene-AC56_RS07500;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=AC56_RS07500;old_locus_tag=AC56_3246
NZ_JJLS01000244.1	Protein Homology	CDS	11183	12163	.	+	0	ID=cds-WP_000886083.1;Parent=gene-AC56_RS07500;Dbxref=GenBank:WP_000886083.1;Name=WP_000886083.1;Ontology_term=GO:0009451,GO:0005542;gbkey=CDS;gene=ygfZ;go_function=folic acid binding|0005542||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417374.1;locus_tag=AC56_RS07500;product=tRNA-modifying protein YgfZ;protein_id=WP_000886083.1;transl_table=11
NZ_JJLS01000244.1	RefSeq	gene	12359	13018	.	-	.	ID=gene-AC56_RS07495;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=AC56_RS07495;old_locus_tag=AC56_3247
NZ_JJLS01000244.1	Protein Homology	CDS	12359	13018	.	-	0	ID=cds-WP_000250274.1;Parent=gene-AC56_RS07495;Dbxref=GenBank:WP_000250274.1;Name=WP_000250274.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311798.1;locus_tag=AC56_RS07495;product=PAQR family membrane homeostasis protein TrhA;protein_id=WP_000250274.1;transl_table=11
NZ_JJLS01000244.1	RefSeq	gene	13182	13493	.	-	.	ID=gene-AC56_RS07490;Name=yqfB;gbkey=Gene;gene=yqfB;gene_biotype=protein_coding;locus_tag=AC56_RS07490;old_locus_tag=AC56_3248
NZ_JJLS01000244.1	Protein Homology	CDS	13182	13493	.	-	0	ID=cds-WP_001182957.1;Parent=gene-AC56_RS07490;Dbxref=GenBank:WP_001182957.1;Name=WP_001182957.1;gbkey=CDS;gene=yqfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311799.1;locus_tag=AC56_RS07490;product=N(4)-acetylcytidine aminohydrolase;protein_id=WP_001182957.1;transl_table=11
NZ_JJLS01000244.1	RefSeq	gene	13538	14971	.	+	.	ID=gene-AC56_RS07485;Name=bglA;gbkey=Gene;gene=bglA;gene_biotype=protein_coding;locus_tag=AC56_RS07485;old_locus_tag=AC56_3249
NZ_JJLS01000244.1	Protein Homology	CDS	13538	14971	.	+	0	ID=cds-WP_032278899.1;Parent=gene-AC56_RS07485;Dbxref=GenBank:WP_032278899.1;Name=WP_032278899.1;gbkey=CDS;gene=bglA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708664.2;locus_tag=AC56_RS07485;product=6-phospho-beta-glucosidase BglA;protein_id=WP_032278899.1;transl_table=11
NZ_JJLS01000244.1	RefSeq	gene	15028	15771	.	-	.	ID=gene-AC56_RS07480;Name=ygfF;gbkey=Gene;gene=ygfF;gene_biotype=protein_coding;locus_tag=AC56_RS07480;old_locus_tag=AC56_3250
NZ_JJLS01000244.1	Protein Homology	CDS	15028	15771	.	-	0	ID=cds-WP_000951964.1;Parent=gene-AC56_RS07480;Dbxref=GenBank:WP_000951964.1;Name=WP_000951964.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ygfF;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417378.1;locus_tag=AC56_RS07480;product=SDR family oxidoreductase;protein_id=WP_000951964.1;transl_table=11
NZ_JJLS01000244.1	RefSeq	gene	16038	18911	.	-	.	ID=gene-AC56_RS07475;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=AC56_RS07475;old_locus_tag=AC56_3251
NZ_JJLS01000244.1	Protein Homology	CDS	16038	18911	.	-	0	ID=cds-WP_032278897.1;Parent=gene-AC56_RS07475;Dbxref=GenBank:WP_032278897.1;Name=WP_032278897.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417379.1;locus_tag=AC56_RS07475;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_032278897.1;transl_table=11
NZ_JJLS01000244.1	RefSeq	gene	19030	19419	.	-	.	ID=gene-AC56_RS07470;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=AC56_RS07470;old_locus_tag=AC56_3252
NZ_JJLS01000244.1	Protein Homology	CDS	19030	19419	.	-	0	ID=cds-WP_001295377.1;Parent=gene-AC56_RS07470;Dbxref=GenBank:WP_001295377.1;Name=WP_001295377.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123344.1;locus_tag=AC56_RS07470;product=glycine cleavage system protein GcvH;protein_id=WP_001295377.1;transl_table=11
NZ_JJLS01000244.1	RefSeq	gene	19443	20537	.	-	.	ID=gene-AC56_RS07465;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=AC56_RS07465;old_locus_tag=AC56_3253
NZ_JJLS01000244.1	Protein Homology	CDS	19443	20537	.	-	0	ID=cds-WP_000068701.1;Parent=gene-AC56_RS07465;Dbxref=GenBank:WP_000068701.1;Name=WP_000068701.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417381.1;locus_tag=AC56_RS07465;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_000068701.1;transl_table=11
NZ_JJLS01000244.1	RefSeq	gene	20827	20910	.	+	.	ID=gene-AC56_RS32810;Name=AC56_RS32810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS32810
NZ_JJLS01000244.1	Protein Homology	CDS	20827	20910	.	+	0	ID=cds-WP_122056850.1;Parent=gene-AC56_RS32810;Dbxref=GenBank:WP_122056850.1;Name=WP_122056850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518813.1;locus_tag=AC56_RS32810;product=hypothetical protein;protein_id=WP_122056850.1;transl_table=11
NZ_JJLS01000244.1	RefSeq	gene	20984	22186	.	-	.	ID=gene-AC56_RS07460;Name=ubiI;gbkey=Gene;gene=ubiI;gene_biotype=protein_coding;gene_synonym=visC;locus_tag=AC56_RS07460;old_locus_tag=AC56_3254
NZ_JJLS01000244.1	Protein Homology	CDS	20984	22186	.	-	0	ID=cds-WP_001192185.1;Parent=gene-AC56_RS07460;Dbxref=GenBank:WP_001192185.1;Name=WP_001192185.1;Ontology_term=GO:0006744,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiI;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311804.1;locus_tag=AC56_RS07460;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=WP_001192185.1;transl_table=11
NZ_JJLS01000244.1	RefSeq	gene	22209	23387	.	-	.	ID=gene-AC56_RS07455;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=AC56_RS07455;old_locus_tag=AC56_3255
NZ_JJLS01000244.1	Protein Homology	CDS	22209	23387	.	-	0	ID=cds-WP_000111199.1;Parent=gene-AC56_RS07455;Dbxref=GenBank:WP_000111199.1;Name=WP_000111199.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417383.1;locus_tag=AC56_RS07455;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_000111199.1;transl_table=11
NZ_JJLS01000244.1	RefSeq	gene	23384	24709	.	-	.	ID=gene-AC56_RS07450;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=AC56_RS07450;old_locus_tag=AC56_3256
NZ_JJLS01000244.1	Protein Homology	CDS	23384	24709	.	-	0	ID=cds-WP_032278898.1;Parent=gene-AC56_RS07450;Dbxref=GenBank:WP_032278898.1;Name=WP_032278898.1;Ontology_term=GO:0070006;gbkey=CDS;gene=pepP;go_function=metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311806.1;locus_tag=AC56_RS07450;product=Xaa-Pro aminopeptidase;protein_id=WP_032278898.1;transl_table=11
NZ_JJLS01000244.1	RefSeq	gene	24735	25313	.	-	.	ID=gene-AC56_RS07445;Name=ygfB;gbkey=Gene;gene=ygfB;gene_biotype=protein_coding;locus_tag=AC56_RS07445;old_locus_tag=AC56_3257
NZ_JJLS01000244.1	Protein Homology	CDS	24735	25313	.	-	0	ID=cds-WP_001295378.1;Parent=gene-AC56_RS07445;Dbxref=GenBank:WP_001295378.1;Name=WP_001295378.1;gbkey=CDS;gene=ygfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708672.2;locus_tag=AC56_RS07445;product=UPF0149 family protein YgfB;protein_id=WP_001295378.1;transl_table=11
NZ_JJLS01000244.1	RefSeq	gene	25481	25810	.	+	.	ID=gene-AC56_RS07440;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=AC56_RS07440;old_locus_tag=AC56_3258
NZ_JJLS01000244.1	Protein Homology	CDS	25481	25810	.	+	0	ID=cds-WP_001276008.1;Parent=gene-AC56_RS07440;Dbxref=GenBank:WP_001276008.1;Name=WP_001276008.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311808.1;locus_tag=AC56_RS07440;product=cell division protein ZapA;protein_id=WP_001276008.1;transl_table=11
NZ_JJLS01000244.1	RefSeq	gene	25852	26035	.	+	.	ID=gene-AC56_RS27970;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=AC56_RS27970
NZ_JJLS01000244.1	cmsearch	ncRNA	25852	26035	.	+	.	ID=rna-AC56_RS27970;Parent=gene-AC56_RS27970;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS27970;product=6S RNA
NZ_JJLS01000244.1	cmsearch	exon	25852	26035	.	+	.	ID=exon-AC56_RS27970-1;Parent=rna-AC56_RS27970;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS27970;product=6S RNA
NZ_JJLS01000244.1	RefSeq	gene	26056	26658	.	+	.	ID=gene-AC56_RS07435;Name=fau;gbkey=Gene;gene=fau;gene_biotype=protein_coding;locus_tag=AC56_RS07435;old_locus_tag=AC56_3259
NZ_JJLS01000244.1	Protein Homology	CDS	26056	26658	.	+	0	ID=cds-WP_000192742.1;Parent=gene-AC56_RS07435;Dbxref=GenBank:WP_000192742.1;Name=WP_000192742.1;gbkey=CDS;gene=fau;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311809.4;locus_tag=AC56_RS07435;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_000192742.1;transl_table=11
NZ_JJLS01000244.1	RefSeq	gene	26759	26818	.	-	.	ID=gene-AC56_RS30010;Name=ibsC;gbkey=Gene;gene=ibsC;gene_biotype=protein_coding;locus_tag=AC56_RS30010
NZ_JJLS01000244.1	Protein Homology	CDS	26759	26818	.	-	0	ID=cds-WP_010723220.1;Parent=gene-AC56_RS30010;Dbxref=GenBank:WP_010723220.1;Name=WP_010723220.1;gbkey=CDS;gene=ibsC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791255.1;locus_tag=AC56_RS30010;product=type I toxin-antitoxin system toxin IbsC;protein_id=WP_010723220.1;transl_table=11
NZ_JJLS01000244.1	RefSeq	gene	27047	28279	.	-	.	ID=gene-AC56_RS07430;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=AC56_RS07430;old_locus_tag=AC56_3260
NZ_JJLS01000244.1	Protein Homology	CDS	27047	28279	.	-	0	ID=cds-WP_001151604.1;Parent=gene-AC56_RS07430;Dbxref=GenBank:WP_001151604.1;Name=WP_001151604.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311811.1;locus_tag=AC56_RS07430;product=phosphoglycerate dehydrogenase;protein_id=WP_001151604.1;transl_table=11
NZ_JJLS01000244.1	RefSeq	gene	28698	29658	.	-	.	ID=gene-AC56_RS07425;Name=AC56_RS07425;end_range=29658,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS07425;old_locus_tag=AC56_3262;partial=true
NZ_JJLS01000244.1	Protein Homology	CDS	28698	29658	.	-	1	ID=cds-WP_032282478.1-14;Parent=gene-AC56_RS07425;Dbxref=GenBank:WP_032282478.1;Name=WP_032282478.1;Ontology_term=GO:0006313,GO:0004803;end_range=29658,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS07425;partial=true;product=IS4-like element IS421 family transposase;protein_id=WP_032282478.1;transl_table=11
##sequence-region NZ_JJLS01000245.1 1 19276
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000245.1	RefSeq	region	1	19276	.	+	.	ID=NZ_JJLS01000245.1:1..19276;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000245.1	RefSeq	pseudogene	1	401	.	-	.	ID=gene-AC56_RS07420;Name=AC56_RS07420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS07420;old_locus_tag=AC56_3263;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000245.1	Protein Homology	CDS	1	401	.	-	0	ID=cds-AC56_RS07420;Parent=gene-AC56_RS07420;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS07420;partial=true;product=IS4 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000245.1	RefSeq	gene	475	1134	.	-	.	ID=gene-AC56_RS07415;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=AC56_RS07415;old_locus_tag=AC56_3264
NZ_JJLS01000245.1	Protein Homology	CDS	475	1134	.	-	0	ID=cds-WP_000189743.1;Parent=gene-AC56_RS07415;Dbxref=GenBank:WP_000189743.1;Name=WP_000189743.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311812.1;locus_tag=AC56_RS07415;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_000189743.1;transl_table=11
NZ_JJLS01000245.1	RefSeq	gene	1190	1420	.	-	.	ID=gene-AC56_RS07410;Name=AC56_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS07410;old_locus_tag=AC56_3265
NZ_JJLS01000245.1	Protein Homology	CDS	1190	1420	.	-	0	ID=cds-WP_000545308.1;Parent=gene-AC56_RS07410;Dbxref=GenBank:WP_000545308.1;Name=WP_000545308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001328908.1;locus_tag=AC56_RS07410;product=LysR substrate-binding domain-containing protein;protein_id=WP_000545308.1;transl_table=11
NZ_JJLS01000245.1	RefSeq	gene	1562	2455	.	+	.	ID=gene-AC56_RS07405;Name=argP;gbkey=Gene;gene=argP;gene_biotype=protein_coding;locus_tag=AC56_RS07405;old_locus_tag=AC56_3266
NZ_JJLS01000245.1	Protein Homology	CDS	1562	2455	.	+	0	ID=cds-WP_000828351.1;Parent=gene-AC56_RS07405;Dbxref=GenBank:WP_000828351.1;Name=WP_000828351.1;gbkey=CDS;gene=argP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311813.1;locus_tag=AC56_RS07405;product=DNA-binding transcriptional regulator ArgP;protein_id=WP_000828351.1;transl_table=11
NZ_JJLS01000245.1	RefSeq	gene	2659	4803	.	+	.	ID=gene-AC56_RS07400;Name=scpA;gbkey=Gene;gene=scpA;gene_biotype=protein_coding;locus_tag=AC56_RS07400;old_locus_tag=AC56_3267
NZ_JJLS01000245.1	Protein Homology	CDS	2659	4803	.	+	0	ID=cds-WP_000073223.1;Parent=gene-AC56_RS07400;Dbxref=GenBank:WP_000073223.1;Name=WP_000073223.1;Ontology_term=GO:0004494,GO:0031419,GO:0046872;gbkey=CDS;gene=scpA;go_function=methylmalonyl-CoA mutase activity|0004494||IEA,cobalamin binding|0031419||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417392.1;locus_tag=AC56_RS07400;product=methylmalonyl-CoA mutase;protein_id=WP_000073223.1;transl_table=11
NZ_JJLS01000245.1	RefSeq	gene	4796	5791	.	+	.	ID=gene-AC56_RS07395;Name=meaB;gbkey=Gene;gene=meaB;gene_biotype=protein_coding;locus_tag=AC56_RS07395;old_locus_tag=AC56_3268
NZ_JJLS01000245.1	Protein Homology	CDS	4796	5791	.	+	0	ID=cds-WP_000606527.1;Parent=gene-AC56_RS07395;Dbxref=GenBank:WP_000606527.1;Name=WP_000606527.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=meaB;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417393.1;locus_tag=AC56_RS07395;product=methylmalonyl Co-A mutase-associated GTPase MeaB;protein_id=WP_000606527.1;transl_table=11
NZ_JJLS01000245.1	RefSeq	gene	5802	6587	.	+	.	ID=gene-AC56_RS07390;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=AC56_RS07390;old_locus_tag=AC56_3269
NZ_JJLS01000245.1	Protein Homology	CDS	5802	6587	.	+	0	ID=cds-WP_032278900.1;Parent=gene-AC56_RS07390;Dbxref=GenBank:WP_032278900.1;Name=WP_032278900.1;gbkey=CDS;gene=scpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311816.2;locus_tag=AC56_RS07390;product=methylmalonyl-CoA decarboxylase;protein_id=WP_032278900.1;transl_table=11
NZ_JJLS01000245.1	RefSeq	gene	6611	8089	.	+	.	ID=gene-AC56_RS07385;Name=scpC;gbkey=Gene;gene=scpC;gene_biotype=protein_coding;locus_tag=AC56_RS07385;old_locus_tag=AC56_3270
NZ_JJLS01000245.1	Protein Homology	CDS	6611	8089	.	+	0	ID=cds-WP_000449941.1;Parent=gene-AC56_RS07385;Dbxref=GenBank:WP_000449941.1;Name=WP_000449941.1;gbkey=CDS;gene=scpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311817.1;locus_tag=AC56_RS07385;product=propionyl-CoA:succinate CoA transferase;protein_id=WP_000449941.1;transl_table=11
NZ_JJLS01000245.1	RefSeq	gene	8086	8982	.	-	.	ID=gene-AC56_RS07380;Name=srsR;gbkey=Gene;gene=srsR;gene_biotype=protein_coding;gene_synonym=ygfI;locus_tag=AC56_RS07380;old_locus_tag=AC56_3271
NZ_JJLS01000245.1	Protein Homology	CDS	8086	8982	.	-	0	ID=cds-WP_000350807.1;Parent=gene-AC56_RS07380;Dbxref=GenBank:WP_000350807.1;Name=WP_000350807.1;Ontology_term=GO:0003700;gbkey=CDS;gene=srsR;go_function=DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417396.4;locus_tag=AC56_RS07380;product=LysR family transcriptional regulator SrsR;protein_id=WP_000350807.1;transl_table=11
NZ_JJLS01000245.1	RefSeq	gene	9149	9889	.	-	.	ID=gene-AC56_RS07375;Name=yggE;gbkey=Gene;gene=yggE;gene_biotype=protein_coding;locus_tag=AC56_RS07375;old_locus_tag=AC56_3272
NZ_JJLS01000245.1	Protein Homology	CDS	9149	9889	.	-	0	ID=cds-WP_000669834.1;Parent=gene-AC56_RS07375;Dbxref=GenBank:WP_000669834.1;Name=WP_000669834.1;gbkey=CDS;gene=yggE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311820.1;locus_tag=AC56_RS07375;product=oxidative stress defense protein;protein_id=WP_000669834.1;transl_table=11
NZ_JJLS01000245.1	RefSeq	gene	9982	10617	.	-	.	ID=gene-AC56_RS07370;Name=argO;gbkey=Gene;gene=argO;gene_biotype=protein_coding;locus_tag=AC56_RS07370;old_locus_tag=AC56_3273
NZ_JJLS01000245.1	Protein Homology	CDS	9982	10617	.	-	0	ID=cds-WP_000493352.1;Parent=gene-AC56_RS07370;Dbxref=GenBank:WP_000493352.1;Name=WP_000493352.1;Ontology_term=GO:1903826,GO:0061459,GO:0016020;gbkey=CDS;gene=argO;go_component=membrane|0016020||IEA;go_function=L-arginine transmembrane transporter activity|0061459||IEA;go_process=L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417398.1;locus_tag=AC56_RS07370;product=arginine exporter ArgO;protein_id=WP_000493352.1;transl_table=11
NZ_JJLS01000245.1	RefSeq	gene	10756	11616	.	-	.	ID=gene-AC56_RS07365;Name=mscS;gbkey=Gene;gene=mscS;gene_biotype=protein_coding;locus_tag=AC56_RS07365;old_locus_tag=AC56_3274
NZ_JJLS01000245.1	Protein Homology	CDS	10756	11616	.	-	0	ID=cds-WP_000389818.1;Parent=gene-AC56_RS07365;Dbxref=GenBank:WP_000389818.1;Name=WP_000389818.1;gbkey=CDS;gene=mscS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311822.1;locus_tag=AC56_RS07365;product=small-conductance mechanosensitive channel MscS;protein_id=WP_000389818.1;transl_table=11
NZ_JJLS01000245.1	RefSeq	gene	11974	13053	.	-	.	ID=gene-AC56_RS07360;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=AC56_RS07360;old_locus_tag=AC56_3275
NZ_JJLS01000245.1	Protein Homology	CDS	11974	13053	.	-	0	ID=cds-WP_000034372.1;Parent=gene-AC56_RS07360;Dbxref=GenBank:WP_000034372.1;Name=WP_000034372.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505616.1;locus_tag=AC56_RS07360;product=class II fructose-bisphosphate aldolase;protein_id=WP_000034372.1;transl_table=11
NZ_JJLS01000245.1	RefSeq	gene	13268	14431	.	-	.	ID=gene-AC56_RS07355;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=AC56_RS07355;old_locus_tag=AC56_3276
NZ_JJLS01000245.1	Protein Homology	CDS	13268	14431	.	-	0	ID=cds-WP_000111269.1;Parent=gene-AC56_RS07355;Dbxref=GenBank:WP_000111269.1;Name=WP_000111269.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005761248.1;locus_tag=AC56_RS07355;product=phosphoglycerate kinase;protein_id=WP_000111269.1;transl_table=11
NZ_JJLS01000245.1	RefSeq	gene	14481	15500	.	-	.	ID=gene-AC56_RS07350;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;locus_tag=AC56_RS07350;old_locus_tag=AC56_3277
NZ_JJLS01000245.1	Protein Homology	CDS	14481	15500	.	-	0	ID=cds-WP_001428116.1;Parent=gene-AC56_RS07350;Dbxref=GenBank:WP_001428116.1;Name=WP_001428116.1;Ontology_term=GO:0042823,GO:0048001,GO:0051287;gbkey=CDS;gene=epd;go_function=erythrose-4-phosphate dehydrogenase activity|0048001||IEA,NAD binding|0051287||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311825.1;locus_tag=AC56_RS07350;product=erythrose-4-phosphate dehydrogenase;protein_id=WP_001428116.1;transl_table=11
NZ_JJLS01000245.1	RefSeq	gene	15785	16498	.	-	.	ID=gene-AC56_RS07345;Name=yggC;gbkey=Gene;gene=yggC;gene_biotype=protein_coding;locus_tag=AC56_RS07345;old_locus_tag=AC56_3278
NZ_JJLS01000245.1	Protein Homology	CDS	15785	16498	.	-	0	ID=cds-WP_000687705.1;Parent=gene-AC56_RS07345;Dbxref=GenBank:WP_000687705.1;Name=WP_000687705.1;gbkey=CDS;gene=yggC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417403.1;locus_tag=AC56_RS07345;product=nucleoside/nucleotide kinase family protein;protein_id=WP_000687705.1;transl_table=11
NZ_JJLS01000245.1	RefSeq	gene	16495	17004	.	-	.	ID=gene-AC56_RS07340;Name=fumE;gbkey=Gene;gene=fumE;gene_biotype=protein_coding;locus_tag=AC56_RS07340;old_locus_tag=AC56_3279
NZ_JJLS01000245.1	Protein Homology	CDS	16495	17004	.	-	0	ID=cds-WP_000224146.1;Parent=gene-AC56_RS07340;Dbxref=GenBank:WP_000224146.1;Name=WP_000224146.1;gbkey=CDS;gene=fumE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417404.1;locus_tag=AC56_RS07340;product=fumarase E;protein_id=WP_000224146.1;transl_table=11
NZ_JJLS01000245.1	RefSeq	gene	17026	17991	.	-	.	ID=gene-AC56_RS07335;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=AC56_RS07335;old_locus_tag=AC56_3280
NZ_JJLS01000245.1	Protein Homology	CDS	17026	17991	.	-	0	ID=cds-WP_032278902.1;Parent=gene-AC56_RS07335;Dbxref=GenBank:WP_032278902.1;Name=WP_032278902.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417405.1;locus_tag=AC56_RS07335;product=class II fructose-bisphosphatase;protein_id=WP_032278902.1;transl_table=11
NZ_JJLS01000245.1	RefSeq	pseudogene	17988	18926	.	-	.	ID=gene-AC56_RS07330;Name=AC56_RS07330;end_range=18926,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS07330;old_locus_tag=AC56_3281;partial=true;pseudo=true
NZ_JJLS01000245.1	Protein Homology	CDS	17988	18926	.	-	0	ID=cds-AC56_RS07330;Parent=gene-AC56_RS07330;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=18926,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026187.1;locus_tag=AC56_RS07330;partial=true;product=zinc-binding dehydrogenase;pseudo=true;transl_table=11
NZ_JJLS01000245.1	RefSeq	pseudogene	18983	19276	.	+	.	ID=gene-AC56_RS0126830;Name=AC56_RS0126830;end_range=19276,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0126830;partial=true;pseudo=true
NZ_JJLS01000245.1	Protein Homology	CDS	18983	19276	.	+	0	ID=cds-AC56_RS0126830;Parent=gene-AC56_RS0126830;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=19276,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS0126830;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000246.1 1 48756
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000246.1	RefSeq	region	1	48756	.	+	.	ID=NZ_JJLS01000246.1:1..48756;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000246.1	RefSeq	pseudogene	1	482	.	+	.	ID=gene-AC56_RS07325;Name=AC56_RS07325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS07325;old_locus_tag=AC56_3283;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000246.1	Protein Homology	CDS	1	482	.	+	0	ID=cds-AC56_RS07325;Parent=gene-AC56_RS07325;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS07325;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000246.1	RefSeq	gene	729	2720	.	-	.	ID=gene-AC56_RS07320;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=AC56_RS07320;old_locus_tag=AC56_3284
NZ_JJLS01000246.1	Protein Homology	CDS	729	2720	.	-	0	ID=cds-WP_000098614.1;Parent=gene-AC56_RS07320;Dbxref=GenBank:WP_000098614.1;Name=WP_000098614.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026188.1;locus_tag=AC56_RS07320;product=transketolase;protein_id=WP_000098614.1;transl_table=11
NZ_JJLS01000246.1	RefSeq	gene	2998	3756	.	+	.	ID=gene-AC56_RS07315;Name=loiP;gbkey=Gene;gene=loiP;gene_biotype=protein_coding;gene_synonym=yggG;locus_tag=AC56_RS07315;old_locus_tag=AC56_3285
NZ_JJLS01000246.1	Protein Homology	CDS	2998	3756	.	+	0	ID=cds-WP_032278905.1;Parent=gene-AC56_RS07315;Dbxref=GenBank:WP_032278905.1;Name=WP_032278905.1;gbkey=CDS;gene=loiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417411.2;locus_tag=AC56_RS07315;product=metalloprotease LoiP;protein_id=WP_032278905.1;transl_table=11
NZ_JJLS01000246.1	RefSeq	gene	3962	4882	.	-	.	ID=gene-AC56_RS07310;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=AC56_RS07310;old_locus_tag=AC56_3286
NZ_JJLS01000246.1	Protein Homology	CDS	3962	4882	.	-	0	ID=cds-WP_000105566.1;Parent=gene-AC56_RS07310;Dbxref=GenBank:WP_000105566.1;Name=WP_000105566.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311839.1;locus_tag=AC56_RS07310;product=agmatinase;protein_id=WP_000105566.1;transl_table=11
NZ_JJLS01000246.1	RefSeq	gene	5020	6996	.	-	.	ID=gene-AC56_RS07305;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=AC56_RS07305;old_locus_tag=AC56_3287
NZ_JJLS01000246.1	Protein Homology	CDS	5020	6996	.	-	0	ID=cds-WP_001300904.1;Parent=gene-AC56_RS07305;Dbxref=GenBank:WP_001300904.1;Name=WP_001300904.1;Ontology_term=GO:0006527,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417413.1;locus_tag=AC56_RS07305;product=biosynthetic arginine decarboxylase;protein_id=WP_001300904.1;transl_table=11
NZ_JJLS01000246.1	RefSeq	gene	7005	7136	.	-	.	ID=gene-AC56_RS07300;Name=yqgB;gbkey=Gene;gene=yqgB;gene_biotype=protein_coding;locus_tag=AC56_RS07300;old_locus_tag=AC56_3288
NZ_JJLS01000246.1	Protein Homology	CDS	7005	7136	.	-	0	ID=cds-WP_001297406.1;Parent=gene-AC56_RS07300;Dbxref=GenBank:WP_001297406.1;Name=WP_001297406.1;gbkey=CDS;gene=yqgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417414.2;locus_tag=AC56_RS07300;product=acid stress response protein YqgB;protein_id=WP_001297406.1;transl_table=11
NZ_JJLS01000246.1	RefSeq	gene	7230	7373	.	-	.	ID=gene-AC56_RS33585;Name=yqgG;gbkey=Gene;gene=yqgG;gene_biotype=protein_coding;locus_tag=AC56_RS33585
NZ_JJLS01000246.1	Protein Homology	CDS	7230	7373	.	-	0	ID=cds-WP_001297404.1;Parent=gene-AC56_RS33585;Dbxref=GenBank:WP_001297404.1;Name=WP_001297404.1;gbkey=CDS;gene=yqgG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051195.1;locus_tag=AC56_RS33585;product=protein YqgG;protein_id=WP_001297404.1;transl_table=11
NZ_JJLS01000246.1	RefSeq	gene	7484	7735	.	-	.	ID=gene-AC56_RS33590;Name=yqgD;gbkey=Gene;gene=yqgD;gene_biotype=protein_coding;locus_tag=AC56_RS33590;old_locus_tag=AC56_3289
NZ_JJLS01000246.1	Protein Homology	CDS	7484	7735	.	-	0	ID=cds-WP_001326496.1;Parent=gene-AC56_RS33590;Dbxref=GenBank:WP_001326496.1;Name=WP_001326496.1;gbkey=CDS;gene=yqgD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518814.1;locus_tag=AC56_RS33590;product=protein YqgD;protein_id=WP_001326496.1;transl_table=11
NZ_JJLS01000246.1	RefSeq	gene	7791	8945	.	+	.	ID=gene-AC56_RS07295;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=AC56_RS07295;old_locus_tag=AC56_3290
NZ_JJLS01000246.1	Protein Homology	CDS	7791	8945	.	+	0	ID=cds-WP_001062128.1;Parent=gene-AC56_RS07295;Dbxref=GenBank:WP_001062128.1;Name=WP_001062128.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1;locus_tag=AC56_RS07295;product=methionine adenosyltransferase;protein_id=WP_001062128.1;transl_table=11
NZ_JJLS01000246.1	RefSeq	gene	9369	10763	.	+	.	ID=gene-AC56_RS07290;Name=galP;gbkey=Gene;gene=galP;gene_biotype=protein_coding;locus_tag=AC56_RS07290;old_locus_tag=AC56_3291
NZ_JJLS01000246.1	Protein Homology	CDS	9369	10763	.	+	0	ID=cds-WP_001112301.1;Parent=gene-AC56_RS07290;Dbxref=GenBank:WP_001112301.1;Name=WP_001112301.1;gbkey=CDS;gene=galP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417418.1;locus_tag=AC56_RS07290;product=galactose/proton symporter;protein_id=WP_001112301.1;transl_table=11
NZ_JJLS01000246.1	RefSeq	gene	10840	11337	.	+	.	ID=gene-AC56_RS07285;Name=yggI;gbkey=Gene;gene=yggI;gene_biotype=protein_coding;locus_tag=AC56_RS07285;old_locus_tag=AC56_3292
NZ_JJLS01000246.1	Protein Homology	CDS	10840	11337	.	+	0	ID=cds-WP_001300769.1;Parent=gene-AC56_RS07285;Dbxref=GenBank:WP_001300769.1;Name=WP_001300769.1;gbkey=CDS;gene=yggI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417419.1;locus_tag=AC56_RS07285;product=SprT family zinc-dependent metalloprotease;protein_id=WP_001300769.1;transl_table=11
NZ_JJLS01000246.1	RefSeq	gene	11432	12139	.	+	.	ID=gene-AC56_RS07280;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;locus_tag=AC56_RS07280;old_locus_tag=AC56_3293
NZ_JJLS01000246.1	Protein Homology	CDS	11432	12139	.	+	0	ID=cds-WP_000286500.1;Parent=gene-AC56_RS07280;Dbxref=GenBank:WP_000286500.1;Name=WP_000286500.1;Ontology_term=GO:0004518;gbkey=CDS;gene=endA;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417420.1;locus_tag=AC56_RS07280;product=deoxyribonuclease I;protein_id=WP_000286500.1;transl_table=11
NZ_JJLS01000246.1	RefSeq	gene	12219	12950	.	+	.	ID=gene-AC56_RS07275;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=AC56_RS07275;old_locus_tag=AC56_3294
NZ_JJLS01000246.1	Protein Homology	CDS	12219	12950	.	+	0	ID=cds-WP_001300912.1;Parent=gene-AC56_RS07275;Dbxref=GenBank:WP_001300912.1;Name=WP_001300912.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rsmE;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311849.2;locus_tag=AC56_RS07275;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_001300912.1;transl_table=11
NZ_JJLS01000246.1	RefSeq	gene	12963	13913	.	+	.	ID=gene-AC56_RS07270;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=AC56_RS07270;old_locus_tag=AC56_3295
NZ_JJLS01000246.1	Protein Homology	CDS	12963	13913	.	+	0	ID=cds-WP_001413862.1;Parent=gene-AC56_RS07270;Dbxref=GenBank:WP_001413862.1;Name=WP_001413862.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417422.1;locus_tag=AC56_RS07270;product=glutathione synthase;protein_id=WP_001413862.1;transl_table=11
NZ_JJLS01000246.1	RefSeq	gene	14022	14585	.	+	.	ID=gene-AC56_RS07265;Name=yqgE;gbkey=Gene;gene=yqgE;gene_biotype=protein_coding;locus_tag=AC56_RS07265;old_locus_tag=AC56_3296
NZ_JJLS01000246.1	Protein Homology	CDS	14022	14585	.	+	0	ID=cds-WP_001053178.1;Parent=gene-AC56_RS07265;Dbxref=GenBank:WP_001053178.1;Name=WP_001053178.1;gbkey=CDS;gene=yqgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417423.4;locus_tag=AC56_RS07265;product=YqgE/AlgH family protein;protein_id=WP_001053178.1;transl_table=11
NZ_JJLS01000246.1	RefSeq	gene	14585	15001	.	+	.	ID=gene-AC56_RS07260;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=AC56_RS07260;old_locus_tag=AC56_3297
NZ_JJLS01000246.1	Protein Homology	CDS	14585	15001	.	+	0	ID=cds-WP_000017106.1;Parent=gene-AC56_RS07260;Dbxref=GenBank:WP_000017106.1;Name=WP_000017106.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417424.1;locus_tag=AC56_RS07260;product=Holliday junction resolvase RuvX;protein_id=WP_000017106.1;transl_table=11
NZ_JJLS01000246.1	RefSeq	gene	15185	16165	.	-	.	ID=gene-AC56_RS07255;Name=yggR;gbkey=Gene;gene=yggR;gene_biotype=protein_coding;locus_tag=AC56_RS07255;old_locus_tag=AC56_3299
NZ_JJLS01000246.1	Protein Homology	CDS	15185	16165	.	-	0	ID=cds-WP_001326494.1;Parent=gene-AC56_RS07255;Dbxref=GenBank:WP_001326494.1;Name=WP_001326494.1;Ontology_term=GO:0043107,GO:0005524;gbkey=CDS;gene=yggR;go_function=ATP binding|0005524||IEA;go_process=type IV pilus-dependent motility|0043107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417425.2;locus_tag=AC56_RS07255;product=PilT/PilU family type 4a pilus ATPase;protein_id=WP_001326494.1;transl_table=11
NZ_JJLS01000246.1	RefSeq	gene	16183	16887	.	+	.	ID=gene-AC56_RS07250;Name=yggS;gbkey=Gene;gene=yggS;gene_biotype=protein_coding;locus_tag=AC56_RS07250;old_locus_tag=AC56_3300
NZ_JJLS01000246.1	Protein Homology	CDS	16183	16887	.	+	0	ID=cds-WP_032278906.1;Parent=gene-AC56_RS07250;Dbxref=GenBank:WP_032278906.1;Name=WP_032278906.1;gbkey=CDS;gene=yggS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417426.1;locus_tag=AC56_RS07250;product=pyridoxal phosphate homeostasis protein;protein_id=WP_032278906.1;transl_table=11
NZ_JJLS01000246.1	RefSeq	gene	16905	17471	.	+	.	ID=gene-AC56_RS07245;Name=yggT;gbkey=Gene;gene=yggT;gene_biotype=protein_coding;locus_tag=AC56_RS07245;old_locus_tag=AC56_3301
NZ_JJLS01000246.1	Protein Homology	CDS	16905	17471	.	+	0	ID=cds-WP_001094831.1;Parent=gene-AC56_RS07245;Dbxref=GenBank:WP_001094831.1;Name=WP_001094831.1;gbkey=CDS;gene=yggT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311855.1;locus_tag=AC56_RS07245;product=osmotic shock tolerance protein YggT;protein_id=WP_001094831.1;transl_table=11
NZ_JJLS01000246.1	RefSeq	gene	17468	17758	.	+	.	ID=gene-AC56_RS07240;Name=yggU;gbkey=Gene;gene=yggU;gene_biotype=protein_coding;locus_tag=AC56_RS07240;old_locus_tag=AC56_3302
NZ_JJLS01000246.1	Protein Homology	CDS	17468	17758	.	+	0	ID=cds-WP_000994920.1;Parent=gene-AC56_RS07240;Dbxref=GenBank:WP_000994920.1;Name=WP_000994920.1;gbkey=CDS;gene=yggU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417428.2;locus_tag=AC56_RS07240;product=DUF167 family protein YggU;protein_id=WP_000994920.1;transl_table=11
NZ_JJLS01000246.1	RefSeq	gene	17766	18359	.	+	.	ID=gene-AC56_RS07235;Name=rdgB;gbkey=Gene;gene=rdgB;gene_biotype=protein_coding;locus_tag=AC56_RS07235;old_locus_tag=AC56_3303
NZ_JJLS01000246.1	Protein Homology	CDS	17766	18359	.	+	0	ID=cds-WP_001174777.1;Parent=gene-AC56_RS07235;Dbxref=GenBank:WP_001174777.1;Name=WP_001174777.1;Ontology_term=GO:0006281,GO:0035870,GO:0036222;gbkey=CDS;gene=rdgB;go_function=dITP diphosphatase activity|0035870||IEA,XTP diphosphatase activity|0036222||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417429.1;locus_tag=AC56_RS07235;product=RdgB/HAM1 family non-canonical purine NTP pyrophosphatase;protein_id=WP_001174777.1;transl_table=11
NZ_JJLS01000246.1	RefSeq	gene	18352	19488	.	+	.	ID=gene-AC56_RS07230;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=AC56_RS07230;old_locus_tag=AC56_3304
NZ_JJLS01000246.1	Protein Homology	CDS	18352	19488	.	+	0	ID=cds-WP_000239943.1;Parent=gene-AC56_RS07230;Dbxref=GenBank:WP_000239943.1;Name=WP_000239943.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417430.1;locus_tag=AC56_RS07230;product=radical SAM family heme chaperone HemW;protein_id=WP_000239943.1;transl_table=11
NZ_JJLS01000246.1	RefSeq	gene	19643	20650	.	-	.	ID=gene-AC56_RS07225;Name=yggM;gbkey=Gene;gene=yggM;gene_biotype=protein_coding;locus_tag=AC56_RS07225;old_locus_tag=AC56_3305
NZ_JJLS01000246.1	Protein Homology	CDS	19643	20650	.	-	0	ID=cds-WP_000745244.1;Parent=gene-AC56_RS07225;Dbxref=GenBank:WP_000745244.1;Name=WP_000745244.1;gbkey=CDS;gene=yggM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417431.1;locus_tag=AC56_RS07225;product=DUF1202 family protein;protein_id=WP_000745244.1;transl_table=11
NZ_JJLS01000246.1	RefSeq	gene	20767	21813	.	-	.	ID=gene-AC56_RS07220;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=AC56_RS07220;old_locus_tag=AC56_3306
NZ_JJLS01000246.1	Protein Homology	CDS	20767	21813	.	-	0	ID=cds-WP_000394131.1;Parent=gene-AC56_RS07220;Dbxref=GenBank:WP_000394131.1;Name=WP_000394131.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;gene=ansB;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417432.1;locus_tag=AC56_RS07220;product=L-asparaginase 2;protein_id=WP_000394131.1;transl_table=11
NZ_JJLS01000246.1	RefSeq	gene	21989	22708	.	-	.	ID=gene-AC56_RS07215;Name=yggN;gbkey=Gene;gene=yggN;gene_biotype=protein_coding;locus_tag=AC56_RS07215;old_locus_tag=AC56_3307
NZ_JJLS01000246.1	Protein Homology	CDS	21989	22708	.	-	0	ID=cds-WP_000984796.1;Parent=gene-AC56_RS07215;Dbxref=GenBank:WP_000984796.1;Name=WP_000984796.1;gbkey=CDS;gene=yggN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311861.1;locus_tag=AC56_RS07215;product=DUF2884 domain-containing protein;protein_id=WP_000984796.1;transl_table=11
NZ_JJLS01000246.1	RefSeq	gene	22892	23218	.	-	.	ID=gene-AC56_RS07205;Name=yggL;gbkey=Gene;gene=yggL;gene_biotype=protein_coding;locus_tag=AC56_RS07205;old_locus_tag=AC56_3309
NZ_JJLS01000246.1	Protein Homology	CDS	22892	23218	.	-	0	ID=cds-WP_001107564.1;Parent=gene-AC56_RS07205;Dbxref=GenBank:WP_001107564.1;Name=WP_001107564.1;gbkey=CDS;gene=yggL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417434.4;locus_tag=AC56_RS07205;product=YggL family protein;protein_id=WP_001107564.1;transl_table=11
NZ_JJLS01000246.1	RefSeq	gene	23218	23937	.	-	.	ID=gene-AC56_RS07200;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=AC56_RS07200;old_locus_tag=AC56_3310
NZ_JJLS01000246.1	Protein Homology	CDS	23218	23937	.	-	0	ID=cds-WP_000786911.1;Parent=gene-AC56_RS07200;Dbxref=GenBank:WP_000786911.1;Name=WP_000786911.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417435.1;locus_tag=AC56_RS07200;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_000786911.1;transl_table=11
NZ_JJLS01000246.1	RefSeq	gene	24098	25150	.	+	.	ID=gene-AC56_RS07195;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=AC56_RS07195;old_locus_tag=AC56_3312
NZ_JJLS01000246.1	Protein Homology	CDS	24098	25150	.	+	0	ID=cds-WP_001321419.1;Parent=gene-AC56_RS07195;Dbxref=GenBank:WP_001321419.1;Name=WP_001321419.1;Ontology_term=GO:0006281,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417436.1;locus_tag=AC56_RS07195;product=A/G-specific adenine glycosylase;protein_id=WP_001321419.1;transl_table=11
NZ_JJLS01000246.1	RefSeq	gene	25178	25453	.	+	.	ID=gene-AC56_RS07190;Name=yggX;gbkey=Gene;gene=yggX;gene_biotype=protein_coding;locus_tag=AC56_RS07190;old_locus_tag=AC56_3313
NZ_JJLS01000246.1	Protein Homology	CDS	25178	25453	.	+	0	ID=cds-WP_001697398.1;Parent=gene-AC56_RS07190;Dbxref=GenBank:WP_001697398.1;Name=WP_001697398.1;Ontology_term=GO:0005506;gbkey=CDS;gene=yggX;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311865.1;locus_tag=AC56_RS07190;product=oxidative damage protection protein;protein_id=WP_001697398.1;transl_table=11
NZ_JJLS01000246.1	RefSeq	gene	25518	26597	.	+	.	ID=gene-AC56_RS07185;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=AC56_RS07185;old_locus_tag=AC56_3314
NZ_JJLS01000246.1	Protein Homology	CDS	25518	26597	.	+	0	ID=cds-WP_000760323.1;Parent=gene-AC56_RS07185;Dbxref=GenBank:WP_000760323.1;Name=WP_000760323.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltC;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417438.2;locus_tag=AC56_RS07185;product=membrane-bound lytic murein transglycosylase MltC;protein_id=WP_000760323.1;transl_table=11
NZ_JJLS01000246.1	RefSeq	gene	26799	28055	.	+	.	ID=gene-AC56_RS07180;Name=nupG;gbkey=Gene;gene=nupG;gene_biotype=protein_coding;locus_tag=AC56_RS07180;old_locus_tag=AC56_3315
NZ_JJLS01000246.1	Protein Homology	CDS	26799	28055	.	+	0	ID=cds-WP_001049791.1;Parent=gene-AC56_RS07180;Dbxref=GenBank:WP_001049791.1;Name=WP_001049791.1;gbkey=CDS;gene=nupG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311867.2;locus_tag=AC56_RS07180;product=nucleoside permease NupG;protein_id=WP_001049791.1;transl_table=11
NZ_JJLS01000246.1	RefSeq	gene	28105	30240	.	-	.	ID=gene-AC56_RS07175;Name=speC;gbkey=Gene;gene=speC;gene_biotype=protein_coding;locus_tag=AC56_RS07175;old_locus_tag=AC56_3316
NZ_JJLS01000246.1	Protein Homology	CDS	28105	30240	.	-	0	ID=cds-WP_001326492.1;Parent=gene-AC56_RS07175;Dbxref=GenBank:WP_001326492.1;Name=WP_001326492.1;gbkey=CDS;gene=speC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417440.4;locus_tag=AC56_RS07175;product=ornithine decarboxylase;protein_id=WP_001326492.1;transl_table=11
NZ_JJLS01000246.1	RefSeq	gene	30402	30485	.	-	.	ID=gene-AC56_RS33370;Name=yqgH;gbkey=Gene;gene=yqgH;gene_biotype=protein_coding;locus_tag=AC56_RS33370
NZ_JJLS01000246.1	Protein Homology	CDS	30402	30485	.	-	0	ID=cds-WP_211180506.1;Parent=gene-AC56_RS33370;Dbxref=GenBank:WP_211180506.1;Name=WP_211180506.1;gbkey=CDS;gene=yqgH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051196.1;locus_tag=AC56_RS33370;product=protein YqgH;protein_id=WP_211180506.1;transl_table=11
NZ_JJLS01000246.1	RefSeq	gene	30638	31345	.	+	.	ID=gene-AC56_RS07170;Name=yqgA;gbkey=Gene;gene=yqgA;gene_biotype=protein_coding;locus_tag=AC56_RS07170;old_locus_tag=AC56_3317
NZ_JJLS01000246.1	Protein Homology	CDS	30638	31345	.	+	0	ID=cds-WP_032278908.1;Parent=gene-AC56_RS07170;Dbxref=GenBank:WP_032278908.1;Name=WP_032278908.1;gbkey=CDS;gene=yqgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417441.1;locus_tag=AC56_RS07170;product=DUF554 domain-containing protein;protein_id=WP_032278908.1;transl_table=11
NZ_JJLS01000246.1	RefSeq	gene	31451	31526	.	+	.	ID=gene-AC56_RS07165;Name=AC56_RS07165;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS07165;old_locus_tag=AC56_3318
NZ_JJLS01000246.1	tRNAscan-SE	tRNA	31451	31526	.	+	.	ID=rna-AC56_RS07165;Parent=gene-AC56_RS07165;anticodon=(pos:31484..31486);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS07165;product=tRNA-Phe
NZ_JJLS01000246.1	tRNAscan-SE	exon	31451	31526	.	+	.	ID=exon-AC56_RS07165-1;Parent=rna-AC56_RS07165;anticodon=(pos:31484..31486);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS07165;product=tRNA-Phe
NZ_JJLS01000246.1	RefSeq	gene	31724	32989	.	+	.	ID=gene-AC56_RS07160;Name=AC56_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS07160;old_locus_tag=AC56_3319
NZ_JJLS01000246.1	Protein Homology	CDS	31724	32989	.	+	0	ID=cds-WP_032237479.1;Parent=gene-AC56_RS07160;Dbxref=GenBank:WP_032237479.1;Name=WP_032237479.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001218764.1;locus_tag=AC56_RS07160;product=tyrosine-type recombinase/integrase;protein_id=WP_032237479.1;transl_table=11
NZ_JJLS01000246.1	RefSeq	pseudogene	33315	34815	.	-	.	ID=gene-AC56_RS0126845;Name=AC56_RS0126845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0126845;pseudo=true
NZ_JJLS01000246.1	Protein Homology	CDS	33315	34815	.	-	0	ID=cds-AC56_RS0126845;Parent=gene-AC56_RS0126845;Note=frameshifted;Ontology_term=GO:0009244,GO:1900727,GO:0016776;gbkey=CDS;go_function=phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA,osmoregulated periplasmic glucan biosynthetic process|1900727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001535067.1;locus_tag=AC56_RS0126845;product=phosphoethanolamine transferase;pseudo=true;transl_table=11
NZ_JJLS01000246.1	RefSeq	gene	34989	35519	.	-	.	ID=gene-AC56_RS33790;Name=AC56_RS33790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33790;old_locus_tag=AC56_3323
NZ_JJLS01000246.1	Protein Homology	CDS	34989	35519	.	-	0	ID=cds-WP_089674132.1;Parent=gene-AC56_RS33790;Dbxref=GenBank:WP_089674132.1;Name=WP_089674132.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: protein motif:HMM:NF024895.6;locus_tag=AC56_RS33790;product=outer membrane protein;protein_id=WP_089674132.1;transl_table=11
NZ_JJLS01000246.1	RefSeq	pseudogene	35821	36241	.	-	.	ID=gene-AC56_RS0126855;Name=AC56_RS0126855;end_range=36241,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0126855;partial=true;pseudo=true
NZ_JJLS01000246.1	Protein Homology	CDS	35821	36241	.	-	0	ID=cds-AC56_RS0126855;Parent=gene-AC56_RS0126855;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=36241,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611553.1;locus_tag=AC56_RS0126855;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;transl_table=11
NZ_JJLS01000246.1	RefSeq	gene	36225	36353	.	+	.	ID=gene-AC56_RS33595;Name=AC56_RS33595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33595;old_locus_tag=AC56_3324
NZ_JJLS01000246.1	GeneMarkS-2+	CDS	36225	36353	.	+	0	ID=cds-WP_282915996.1;Parent=gene-AC56_RS33595;Dbxref=GenBank:WP_282915996.1;Name=WP_282915996.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS33595;product=hypothetical protein;protein_id=WP_282915996.1;transl_table=11
NZ_JJLS01000246.1	RefSeq	gene	36462	37451	.	-	.	ID=gene-AC56_RS07155;Name=ghrB;gbkey=Gene;gene=ghrB;gene_biotype=protein_coding;locus_tag=AC56_RS07155;old_locus_tag=AC56_3325
NZ_JJLS01000246.1	Protein Homology	CDS	36462	37451	.	-	0	ID=cds-WP_032278757.1;Parent=gene-AC56_RS07155;Dbxref=GenBank:WP_032278757.1;Name=WP_032278757.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=ghrB;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008786430.1;locus_tag=AC56_RS07155;product=glyoxylate/hydroxypyruvate reductase GhrB;protein_id=WP_032278757.1;transl_table=11
NZ_JJLS01000246.1	RefSeq	gene	37473	38753	.	-	.	ID=gene-AC56_RS07150;Name=AC56_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS07150;old_locus_tag=AC56_3326
NZ_JJLS01000246.1	Protein Homology	CDS	37473	38753	.	-	0	ID=cds-WP_032267813.1;Parent=gene-AC56_RS07150;Dbxref=GenBank:WP_032267813.1;Name=WP_032267813.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229373.1;locus_tag=AC56_RS07150;product=MFS transporter;protein_id=WP_032267813.1;transl_table=11
NZ_JJLS01000246.1	RefSeq	gene	38824	39786	.	-	.	ID=gene-AC56_RS07145;Name=AC56_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS07145;old_locus_tag=AC56_3327
NZ_JJLS01000246.1	Protein Homology	CDS	38824	39786	.	-	0	ID=cds-WP_032278756.1;Parent=gene-AC56_RS07145;Dbxref=GenBank:WP_032278756.1;Name=WP_032278756.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003827390.1;locus_tag=AC56_RS07145;product=sugar kinase;protein_id=WP_032278756.1;transl_table=11
NZ_JJLS01000246.1	RefSeq	gene	39791	40540	.	-	.	ID=gene-AC56_RS07140;Name=AC56_RS07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS07140;old_locus_tag=AC56_3328
NZ_JJLS01000246.1	Protein Homology	CDS	39791	40540	.	-	0	ID=cds-WP_032278754.1;Parent=gene-AC56_RS07140;Dbxref=GenBank:WP_032278754.1;Name=WP_032278754.1;Ontology_term=GO:0003824,GO:0016853;gbkey=CDS;go_function=catalytic activity|0003824||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016154912.1;locus_tag=AC56_RS07140;product=sugar phosphate isomerase/epimerase family protein;protein_id=WP_032278754.1;transl_table=11
NZ_JJLS01000246.1	RefSeq	gene	40640	41656	.	-	.	ID=gene-AC56_RS07135;Name=AC56_RS07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS07135;old_locus_tag=AC56_3329
NZ_JJLS01000246.1	Protein Homology	CDS	40640	41656	.	-	0	ID=cds-WP_032237486.1;Parent=gene-AC56_RS07135;Dbxref=GenBank:WP_032237486.1;Name=WP_032237486.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455692.1;locus_tag=AC56_RS07135;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_032237486.1;transl_table=11
NZ_JJLS01000246.1	RefSeq	pseudogene	41677	42199	.	-	.	ID=gene-AC56_RS33375;Name=AC56_RS33375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33375;partial=true;pseudo=true;start_range=.,41677
NZ_JJLS01000246.1	Protein Homology	CDS	41677	42199	.	-	0	ID=cds-AC56_RS33375;Parent=gene-AC56_RS33375;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005017045.1;locus_tag=AC56_RS33375;partial=true;product=reverse transcriptase domain-containing protein;pseudo=true;start_range=.,41677;transl_table=11
NZ_JJLS01000246.1	RefSeq	pseudogene	42169	43256	.	-	.	ID=gene-AC56_RS07130;Name=AC56_RS07130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS07130;old_locus_tag=AC56_3330;partial=true;pseudo=true;start_range=.,42169
NZ_JJLS01000246.1	Protein Homology	CDS	42169	43256	.	-	0	ID=cds-AC56_RS07130;Parent=gene-AC56_RS07130;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AC56_RS07130;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,42169;transl_table=11
NZ_JJLS01000246.1	cmsearch	sequence_feature	42859	42975	.	-	.	ID=id-AC56_RS07130;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS07130;pseudo=true
NZ_JJLS01000246.1	RefSeq	pseudogene	43496	43759	.	+	.	ID=gene-AC56_RS33380;Name=AC56_RS33380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33380;partial=true;pseudo=true;start_range=.,43496
NZ_JJLS01000246.1	Protein Homology	CDS	43496	43759	.	+	0	ID=cds-AC56_RS33380;Parent=gene-AC56_RS33380;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611134.1;locus_tag=AC56_RS33380;partial=true;product=integrase core domain-containing protein;pseudo=true;start_range=.,43496;transl_table=11
NZ_JJLS01000246.1	RefSeq	gene	43694	44391	.	-	.	ID=gene-AC56_RS07120;Name=AC56_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS07120;old_locus_tag=AC56_3332
NZ_JJLS01000246.1	Protein Homology	CDS	44142	44391	.	-	0	ID=cds-WP_223367350.1;Parent=gene-AC56_RS07120;Dbxref=GenBank:WP_223367350.1;Name=WP_223367350.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=AC56_RS07120;product=IS1 family transposase;protein_id=WP_223367350.1;transl_table=11
NZ_JJLS01000246.1	Protein Homology	CDS	43694	44142	.	-	2	ID=cds-WP_223367350.1;Parent=gene-AC56_RS07120;Dbxref=GenBank:WP_223367350.1;Name=WP_223367350.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=AC56_RS07120;product=IS1 family transposase;protein_id=WP_223367350.1;transl_table=11
NZ_JJLS01000246.1	RefSeq	pseudogene	44447	44998	.	+	.	ID=gene-AC56_RS07115;Name=AC56_RS07115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS07115;old_locus_tag=AC56_3333;partial=true;pseudo=true;start_range=.,44447
NZ_JJLS01000246.1	Protein Homology	CDS	44447	44998	.	+	0	ID=cds-AC56_RS07115;Parent=gene-AC56_RS07115;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416205.1;locus_tag=AC56_RS07115;partial=true;product=MFS transporter;pseudo=true;start_range=.,44447;transl_table=11
NZ_JJLS01000246.1	RefSeq	gene	45225	46490	.	+	.	ID=gene-AC56_RS07110;Name=AC56_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS07110;old_locus_tag=AC56_3334
NZ_JJLS01000246.1	Protein Homology	CDS	45225	46490	.	+	0	ID=cds-WP_001297389.1-4;Parent=gene-AC56_RS07110;Dbxref=GenBank:WP_001297389.1;Name=WP_001297389.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310425.2;locus_tag=AC56_RS07110;product=MFS transporter;protein_id=WP_001297389.1;transl_table=11
NZ_JJLS01000246.1	RefSeq	gene	46502	47368	.	+	.	ID=gene-AC56_RS07105;Name=ydiB;gbkey=Gene;gene=ydiB;gene_biotype=protein_coding;locus_tag=AC56_RS07105;old_locus_tag=AC56_3335
NZ_JJLS01000246.1	Protein Homology	CDS	46502	47368	.	+	0	ID=cds-WP_032278339.1-4;Parent=gene-AC56_RS07105;Dbxref=GenBank:WP_032278339.1;Name=WP_032278339.1;gbkey=CDS;gene=ydiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416207.1;locus_tag=AC56_RS07105;product=quinate/shikimate dehydrogenase;protein_id=WP_032278339.1;transl_table=11
NZ_JJLS01000246.1	RefSeq	gene	47399	48157	.	+	.	ID=gene-AC56_RS07100;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=AC56_RS07100;old_locus_tag=AC56_3336
NZ_JJLS01000246.1	Protein Homology	CDS	47399	48157	.	+	0	ID=cds-WP_016242173.1-4;Parent=gene-AC56_RS07100;Dbxref=GenBank:WP_016242173.1;Name=WP_016242173.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416208.1;locus_tag=AC56_RS07100;product=type I 3-dehydroquinate dehydratase;protein_id=WP_016242173.1;transl_table=11
NZ_JJLS01000246.1	RefSeq	pseudogene	48300	48590	.	+	.	ID=gene-AC56_RS07095;Name=AC56_RS07095;end_range=48590,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS07095;old_locus_tag=AC56_3338;partial=true;pseudo=true
NZ_JJLS01000246.1	Protein Homology	CDS	48300	48590	.	+	0	ID=cds-AC56_RS07095;Parent=gene-AC56_RS07095;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0008410;end_range=48590,.;gbkey=CDS;go_function=CoA-transferase activity|0008410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310428.1;locus_tag=AC56_RS07095;partial=true;product=CoA-transferase;pseudo=true;transl_table=11
NZ_JJLS01000246.1	RefSeq	pseudogene	48622	48756	.	+	.	ID=gene-AC56_RS32815;Name=AC56_RS32815;end_range=48756,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS32815;old_locus_tag=AC56_3339;partial=true;pseudo=true
NZ_JJLS01000246.1	Protein Homology	CDS	48622	48756	.	+	0	ID=cds-AC56_RS32815;Parent=gene-AC56_RS32815;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=48756,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS32815;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000247.1 1 11496
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000247.1	RefSeq	region	1	11496	.	+	.	ID=NZ_JJLS01000247.1:1..11496;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000247.1	RefSeq	gene	1	416	.	+	.	ID=gene-AC56_RS07090;Name=AC56_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS07090;old_locus_tag=AC56_3340;partial=true;start_range=.,1
NZ_JJLS01000247.1	Protein Homology	CDS	1	416	.	+	2	ID=cds-WP_032277845.1;Parent=gene-AC56_RS07090;Dbxref=GenBank:WP_032277845.1;Name=WP_032277845.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS07090;partial=true;product=IS1 family transposase;protein_id=WP_032277845.1;start_range=.,1;transl_table=11
NZ_JJLS01000247.1	RefSeq	gene	427	840	.	-	.	ID=gene-AC56_RS07085;Name=AC56_RS07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS07085;old_locus_tag=AC56_3341
NZ_JJLS01000247.1	Protein Homology	CDS	427	840	.	-	0	ID=cds-WP_050439722.1;Parent=gene-AC56_RS07085;Dbxref=GenBank:WP_050439722.1;Name=WP_050439722.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001683480.1;locus_tag=AC56_RS07085;product=PTS sugar transporter subunit IIA;protein_id=WP_050439722.1;transl_table=11
NZ_JJLS01000247.1	RefSeq	gene	851	1135	.	-	.	ID=gene-AC56_RS07080;Name=AC56_RS07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS07080;old_locus_tag=AC56_3342
NZ_JJLS01000247.1	Protein Homology	CDS	851	1135	.	-	0	ID=cds-WP_032277739.1;Parent=gene-AC56_RS07080;Dbxref=GenBank:WP_032277739.1;Name=WP_032277739.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172369.1;locus_tag=AC56_RS07080;product=PTS sugar transporter subunit IIB;protein_id=WP_032277739.1;transl_table=11
NZ_JJLS01000247.1	RefSeq	gene	1159	2529	.	-	.	ID=gene-AC56_RS07075;Name=AC56_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS07075;old_locus_tag=AC56_3343
NZ_JJLS01000247.1	Protein Homology	CDS	1159	2529	.	-	0	ID=cds-WP_000420479.1;Parent=gene-AC56_RS07075;Dbxref=GenBank:WP_000420479.1;Name=WP_000420479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001564759.1;locus_tag=AC56_RS07075;product=PTS galactitol transporter subunit IIC;protein_id=WP_000420479.1;transl_table=11
NZ_JJLS01000247.1	RefSeq	gene	2533	3069	.	-	.	ID=gene-AC56_RS07070;Name=AC56_RS07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS07070;old_locus_tag=AC56_3344
NZ_JJLS01000247.1	Protein Homology	CDS	2533	3069	.	-	0	ID=cds-WP_000850105.1;Parent=gene-AC56_RS07070;Dbxref=GenBank:WP_000850105.1;Name=WP_000850105.1;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000850105.1;locus_tag=AC56_RS07070;product=RpiB/LacA/LacB family sugar-phosphate isomerase;protein_id=WP_000850105.1;transl_table=11
NZ_JJLS01000247.1	RefSeq	gene	3418	4173	.	+	.	ID=gene-AC56_RS07065;Name=AC56_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS07065;old_locus_tag=AC56_3345
NZ_JJLS01000247.1	Protein Homology	CDS	3418	4173	.	+	0	ID=cds-WP_000281586.1;Parent=gene-AC56_RS07065;Dbxref=GenBank:WP_000281586.1;Name=WP_000281586.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000281586.1;locus_tag=AC56_RS07065;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000281586.1;transl_table=11
NZ_JJLS01000247.1	RefSeq	gene	4501	4944	.	+	.	ID=gene-AC56_RS07060;Name=AC56_RS07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS07060;old_locus_tag=AC56_3346
NZ_JJLS01000247.1	Protein Homology	CDS	4501	4944	.	+	0	ID=cds-WP_000623669.1;Parent=gene-AC56_RS07060;Dbxref=GenBank:WP_000623669.1;Name=WP_000623669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001580732.1;locus_tag=AC56_RS07060;product=PTS sugar transporter subunit IIA;protein_id=WP_000623669.1;transl_table=11
NZ_JJLS01000247.1	RefSeq	gene	4963	5256	.	+	.	ID=gene-AC56_RS07055;Name=AC56_RS07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS07055;old_locus_tag=AC56_3347
NZ_JJLS01000247.1	Protein Homology	CDS	4963	5256	.	+	0	ID=cds-WP_000608250.1;Parent=gene-AC56_RS07055;Dbxref=GenBank:WP_000608250.1;Name=WP_000608250.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000608250.1;locus_tag=AC56_RS07055;product=PTS sugar transporter subunit IIB;protein_id=WP_000608250.1;transl_table=11
NZ_JJLS01000247.1	RefSeq	gene	5277	6530	.	+	.	ID=gene-AC56_RS07050;Name=AC56_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS07050;old_locus_tag=AC56_3348
NZ_JJLS01000247.1	Protein Homology	CDS	5277	6530	.	+	0	ID=cds-WP_000425553.1;Parent=gene-AC56_RS07050;Dbxref=GenBank:WP_000425553.1;Name=WP_000425553.1;Ontology_term=GO:0009401,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000425551.1;locus_tag=AC56_RS07050;product=PTS transporter subunit IIC;protein_id=WP_000425553.1;transl_table=11
NZ_JJLS01000247.1	RefSeq	gene	6553	7197	.	+	.	ID=gene-AC56_RS07045;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=AC56_RS07045;old_locus_tag=AC56_3349
NZ_JJLS01000247.1	Protein Homology	CDS	6553	7197	.	+	0	ID=cds-WP_001062777.1;Parent=gene-AC56_RS07045;Dbxref=GenBank:WP_001062777.1;Name=WP_001062777.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001062775.1;locus_tag=AC56_RS07045;product=ribulose-phosphate 3-epimerase;protein_id=WP_001062777.1;transl_table=11
NZ_JJLS01000247.1	RefSeq	gene	7295	8047	.	+	.	ID=gene-AC56_RS07040;Name=AC56_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS07040;old_locus_tag=AC56_3350
NZ_JJLS01000247.1	Protein Homology	CDS	7295	8047	.	+	0	ID=cds-WP_000064390.1;Parent=gene-AC56_RS07040;Dbxref=GenBank:WP_000064390.1;Name=WP_000064390.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000064391.1;locus_tag=AC56_RS07040;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_000064390.1;transl_table=11
NZ_JJLS01000247.1	RefSeq	gene	8063	8623	.	+	.	ID=gene-AC56_RS07035;Name=hxlB;gbkey=Gene;gene=hxlB;gene_biotype=protein_coding;locus_tag=AC56_RS07035;old_locus_tag=AC56_3351
NZ_JJLS01000247.1	Protein Homology	CDS	8063	8623	.	+	0	ID=cds-WP_032277741.1;Parent=gene-AC56_RS07035;Dbxref=GenBank:WP_032277741.1;Name=WP_032277741.1;Ontology_term=GO:1901135,GO:0016853,GO:0043800;gbkey=CDS;gene=hxlB;go_function=isomerase activity|0016853||IEA,6-phospho-3-hexuloisomerase activity|0043800||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000116013.1;locus_tag=AC56_RS07035;product=6-phospho-3-hexuloisomerase;protein_id=WP_032277741.1;transl_table=11
NZ_JJLS01000247.1	RefSeq	gene	9164	9763	.	+	.	ID=gene-AC56_RS33385;Name=AC56_RS33385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33385;old_locus_tag=AC56_3352
NZ_JJLS01000247.1	GeneMarkS-2+	CDS	9164	9763	.	+	0	ID=cds-WP_248784836.1;Parent=gene-AC56_RS33385;Dbxref=GenBank:WP_248784836.1;Name=WP_248784836.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS33385;product=hypothetical protein;protein_id=WP_248784836.1;transl_table=11
NZ_JJLS01000247.1	RefSeq	gene	9787	11112	.	+	.	ID=gene-AC56_RS0126880;Name=AC56_RS0126880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0126880;old_locus_tag=AC56_3353
NZ_JJLS01000247.1	GeneMarkS-2+	CDS	9787	11112	.	+	0	ID=cds-WP_248784837.1;Parent=gene-AC56_RS0126880;Dbxref=GenBank:WP_248784837.1;Name=WP_248784837.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS0126880;product=hypothetical protein;protein_id=WP_248784837.1;transl_table=11
NZ_JJLS01000247.1	RefSeq	gene	11130	11496	.	+	.	ID=gene-AC56_RS07030;Name=AC56_RS07030;end_range=11496,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS07030;old_locus_tag=AC56_3354;partial=true
NZ_JJLS01000247.1	Protein Homology	CDS	11130	11496	.	+	0	ID=cds-WP_032451470.1-2;Parent=gene-AC56_RS07030;Dbxref=GenBank:WP_032451470.1;Name=WP_032451470.1;end_range=11496,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS07030;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032451470.1;transl_table=11
##sequence-region NZ_JJLS01000248.1 1 23350
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000248.1	RefSeq	region	1	23350	.	+	.	ID=NZ_JJLS01000248.1:1..23350;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000248.1	RefSeq	pseudogene	1	557	.	-	.	ID=gene-AC56_RS07025;Name=AC56_RS07025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS07025;old_locus_tag=AC56_3355;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000248.1	Protein Homology	CDS	1	557	.	-	0	ID=cds-AC56_RS07025;Parent=gene-AC56_RS07025;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS07025;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000248.1	RefSeq	gene	949	2808	.	-	.	ID=gene-AC56_RS07020;Name=gss;gbkey=Gene;gene=gss;gene_biotype=protein_coding;locus_tag=AC56_RS07020;old_locus_tag=AC56_3356
NZ_JJLS01000248.1	Protein Homology	CDS	949	2808	.	-	0	ID=cds-WP_001300624.1;Parent=gene-AC56_RS07020;Dbxref=GenBank:WP_001300624.1;Name=WP_001300624.1;gbkey=CDS;gene=gss;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417462.1;locus_tag=AC56_RS07020;product=bifunctional glutathionylspermidine amidase/synthase;protein_id=WP_001300624.1;transl_table=11
NZ_JJLS01000248.1	RefSeq	gene	3013	3879	.	+	.	ID=gene-AC56_RS07015;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=protein_coding;locus_tag=AC56_RS07015;old_locus_tag=AC56_3357
NZ_JJLS01000248.1	Protein Homology	CDS	3013	3879	.	+	0	ID=cds-WP_001295515.1;Parent=gene-AC56_RS07015;Dbxref=GenBank:WP_001295515.1;Name=WP_001295515.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yghU;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311901.2;locus_tag=AC56_RS07015;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=WP_001295515.1;transl_table=11
NZ_JJLS01000248.1	RefSeq	gene	4002	4250	.	-	.	ID=gene-AC56_RS07010;Name=hybG;gbkey=Gene;gene=hybG;gene_biotype=protein_coding;locus_tag=AC56_RS07010;old_locus_tag=AC56_3358
NZ_JJLS01000248.1	Protein Homology	CDS	4002	4250	.	-	0	ID=cds-WP_000334896.1;Parent=gene-AC56_RS07010;Dbxref=GenBank:WP_000334896.1;Name=WP_000334896.1;gbkey=CDS;gene=hybG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311902.1;locus_tag=AC56_RS07010;product=hydrogenase maturation factor HybG;protein_id=WP_000334896.1;transl_table=11
NZ_JJLS01000248.1	RefSeq	gene	4263	4604	.	-	.	ID=gene-AC56_RS07005;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=AC56_RS07005;old_locus_tag=AC56_3359
NZ_JJLS01000248.1	Protein Homology	CDS	4263	4604	.	-	0	ID=cds-WP_000544953.1;Parent=gene-AC56_RS07005;Dbxref=GenBank:WP_000544953.1;Name=WP_000544953.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417465.1;locus_tag=AC56_RS07005;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544953.1;transl_table=11
NZ_JJLS01000248.1	RefSeq	gene	4597	5085	.	-	.	ID=gene-AC56_RS07000;Name=hybE;gbkey=Gene;gene=hybE;gene_biotype=protein_coding;locus_tag=AC56_RS07000;old_locus_tag=AC56_3360
NZ_JJLS01000248.1	Protein Homology	CDS	4597	5085	.	-	0	ID=cds-WP_000134014.1;Parent=gene-AC56_RS07000;Dbxref=GenBank:WP_000134014.1;Name=WP_000134014.1;gbkey=CDS;gene=hybE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417466.1;locus_tag=AC56_RS07000;product=hydrogenase-2 assembly chaperone;protein_id=WP_000134014.1;transl_table=11
NZ_JJLS01000248.1	RefSeq	gene	5078	5572	.	-	.	ID=gene-AC56_RS06995;Name=hybD;gbkey=Gene;gene=hybD;gene_biotype=protein_coding;locus_tag=AC56_RS06995;old_locus_tag=AC56_3361
NZ_JJLS01000248.1	Protein Homology	CDS	5078	5572	.	-	0	ID=cds-WP_001221939.1;Parent=gene-AC56_RS06995;Dbxref=GenBank:WP_001221939.1;Name=WP_001221939.1;gbkey=CDS;gene=hybD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417467.1;locus_tag=AC56_RS06995;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WP_001221939.1;transl_table=11
NZ_JJLS01000248.1	RefSeq	gene	5572	7275	.	-	.	ID=gene-AC56_RS06990;Name=hybC;gbkey=Gene;gene=hybC;gene_biotype=protein_coding;locus_tag=AC56_RS06990;old_locus_tag=AC56_3362
NZ_JJLS01000248.1	Protein Homology	CDS	5572	7275	.	-	0	ID=cds-WP_000083065.1;Parent=gene-AC56_RS06990;Dbxref=GenBank:WP_000083065.1;Name=WP_000083065.1;Ontology_term=GO:0008901;gbkey=CDS;gene=hybC;go_function=ferredoxin hydrogenase activity|0008901||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311906.1;locus_tag=AC56_RS06990;product=hydrogenase 2 large subunit;protein_id=WP_000083065.1;transl_table=11
NZ_JJLS01000248.1	RefSeq	gene	7272	8450	.	-	.	ID=gene-AC56_RS06985;Name=hybB;gbkey=Gene;gene=hybB;gene_biotype=protein_coding;locus_tag=AC56_RS06985;old_locus_tag=AC56_3363
NZ_JJLS01000248.1	Protein Homology	CDS	7272	8450	.	-	0	ID=cds-WP_000017703.1;Parent=gene-AC56_RS06985;Dbxref=GenBank:WP_000017703.1;Name=WP_000017703.1;gbkey=CDS;gene=hybB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417469.1;locus_tag=AC56_RS06985;product=Ni/Fe-hydrogenase cytochrome b subunit;protein_id=WP_000017703.1;transl_table=11
NZ_JJLS01000248.1	RefSeq	gene	8440	9426	.	-	.	ID=gene-AC56_RS06980;Name=hybA;gbkey=Gene;gene=hybA;gene_biotype=protein_coding;locus_tag=AC56_RS06980;old_locus_tag=AC56_3364
NZ_JJLS01000248.1	Protein Homology	CDS	8440	9426	.	-	0	ID=cds-WP_001081870.1;Parent=gene-AC56_RS06980;Dbxref=GenBank:WP_001081870.1;Name=WP_001081870.1;gbkey=CDS;gene=hybA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311908.1;locus_tag=AC56_RS06980;product=hydrogenase 2 operon protein HybA;protein_id=WP_001081870.1;transl_table=11
NZ_JJLS01000248.1	RefSeq	gene	9429	10547	.	-	.	ID=gene-AC56_RS06975;Name=hybO;gbkey=Gene;gene=hybO;gene_biotype=protein_coding;locus_tag=AC56_RS06975;old_locus_tag=AC56_3365
NZ_JJLS01000248.1	Protein Homology	CDS	9429	10547	.	-	0	ID=cds-WP_000145410.1;Parent=gene-AC56_RS06975;Dbxref=GenBank:WP_000145410.1;Name=WP_000145410.1;gbkey=CDS;gene=hybO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311909.1;locus_tag=AC56_RS06975;product=hydrogenase 2 small subunit;protein_id=WP_000145410.1;transl_table=11
NZ_JJLS01000248.1	RefSeq	gene	10736	11023	.	-	.	ID=gene-AC56_RS06965;Name=yghW;gbkey=Gene;gene=yghW;gene_biotype=protein_coding;locus_tag=AC56_RS06965;old_locus_tag=AC56_3367
NZ_JJLS01000248.1	Protein Homology	CDS	10736	11023	.	-	0	ID=cds-WP_001059136.1;Parent=gene-AC56_RS06965;Dbxref=GenBank:WP_001059136.1;Name=WP_001059136.1;gbkey=CDS;gene=yghW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311910.1;locus_tag=AC56_RS06965;product=DUF2623 family protein YghW;protein_id=WP_001059136.1;transl_table=11
NZ_JJLS01000248.1	RefSeq	gene	11142	12029	.	-	.	ID=gene-AC56_RS06960;Name=yghX;gbkey=Gene;gene=yghX;gene_biotype=protein_coding;locus_tag=AC56_RS06960;old_locus_tag=AC56_3368
NZ_JJLS01000248.1	Protein Homology	CDS	11142	12029	.	-	0	ID=cds-WP_001297303.1;Parent=gene-AC56_RS06960;Dbxref=GenBank:WP_001297303.1;Name=WP_001297303.1;gbkey=CDS;gene=yghX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311911.3;locus_tag=AC56_RS06960;product=YghX family hydrolase;protein_id=WP_001297303.1;transl_table=11
NZ_JJLS01000248.1	RefSeq	gene	12187	13227	.	+	.	ID=gene-AC56_RS06955;Name=gpr;gbkey=Gene;gene=gpr;gene_biotype=protein_coding;locus_tag=AC56_RS06955;old_locus_tag=AC56_3369
NZ_JJLS01000248.1	Protein Homology	CDS	12187	13227	.	+	0	ID=cds-WP_000262144.1;Parent=gene-AC56_RS06955;Dbxref=GenBank:WP_000262144.1;Name=WP_000262144.1;gbkey=CDS;gene=gpr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708818.1;locus_tag=AC56_RS06955;product=L-glyceraldehyde 3-phosphate reductase;protein_id=WP_000262144.1;transl_table=11
NZ_JJLS01000248.1	RefSeq	gene	13267	13761	.	-	.	ID=gene-AC56_RS06950;Name=yqhA;gbkey=Gene;gene=yqhA;gene_biotype=protein_coding;locus_tag=AC56_RS06950;old_locus_tag=AC56_3370
NZ_JJLS01000248.1	Protein Homology	CDS	13267	13761	.	-	0	ID=cds-WP_000439331.1;Parent=gene-AC56_RS06950;Dbxref=GenBank:WP_000439331.1;Name=WP_000439331.1;gbkey=CDS;gene=yqhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311913.1;locus_tag=AC56_RS06950;product=TIGR00645 family protein;protein_id=WP_000439331.1;transl_table=11
NZ_JJLS01000248.1	RefSeq	gene	13952	14836	.	+	.	ID=gene-AC56_RS06945;Name=yghA;gbkey=Gene;gene=yghA;gene_biotype=protein_coding;locus_tag=AC56_RS06945;old_locus_tag=AC56_3371
NZ_JJLS01000248.1	Protein Homology	CDS	13952	14836	.	+	0	ID=cds-WP_000018760.1;Parent=gene-AC56_RS06945;Dbxref=GenBank:WP_000018760.1;Name=WP_000018760.1;gbkey=CDS;gene=yghA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311914.1;locus_tag=AC56_RS06945;product=NADP(+)-dependent aldehyde reductase;protein_id=WP_000018760.1;transl_table=11
NZ_JJLS01000248.1	RefSeq	gene	15108	15533	.	-	.	ID=gene-AC56_RS06940;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=AC56_RS06940;old_locus_tag=AC56_3372
NZ_JJLS01000248.1	Protein Homology	CDS	15108	15533	.	-	0	ID=cds-WP_001240712.1;Parent=gene-AC56_RS06940;Dbxref=GenBank:WP_001240712.1;Name=WP_001240712.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbD;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311916.1;locus_tag=AC56_RS06940;product=TonB system transport protein ExbD;protein_id=WP_001240712.1;transl_table=11
NZ_JJLS01000248.1	RefSeq	gene	15540	16274	.	-	.	ID=gene-AC56_RS06935;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=AC56_RS06935;old_locus_tag=AC56_3373
NZ_JJLS01000248.1	Protein Homology	CDS	15540	16274	.	-	0	ID=cds-WP_000527844.1;Parent=gene-AC56_RS06935;Dbxref=GenBank:WP_000527844.1;Name=WP_000527844.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311917.1;locus_tag=AC56_RS06935;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_000527844.1;transl_table=11
NZ_JJLS01000248.1	RefSeq	gene	16526	17713	.	+	.	ID=gene-AC56_RS06930;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=AC56_RS06930;old_locus_tag=AC56_3374
NZ_JJLS01000248.1	Protein Homology	CDS	16526	17713	.	+	0	ID=cds-WP_001320425.1;Parent=gene-AC56_RS06930;Dbxref=GenBank:WP_001320425.1;Name=WP_001320425.1;Ontology_term=GO:0006520,GO:0019346,GO:0030170,GO:0047804;gbkey=CDS;gene=metC;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=amino acid metabolic process|0006520||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311919.1;locus_tag=AC56_RS06930;product=cystathionine beta-lyase;protein_id=WP_001320425.1;transl_table=11
NZ_JJLS01000248.1	RefSeq	gene	17853	18512	.	+	.	ID=gene-AC56_RS06925;Name=yghB;gbkey=Gene;gene=yghB;gene_biotype=protein_coding;locus_tag=AC56_RS06925;old_locus_tag=AC56_3375
NZ_JJLS01000248.1	Protein Homology	CDS	17853	18512	.	+	0	ID=cds-WP_000268419.1;Parent=gene-AC56_RS06925;Dbxref=GenBank:WP_000268419.1;Name=WP_000268419.1;gbkey=CDS;gene=yghB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311920.1;locus_tag=AC56_RS06925;product=DedA family general envelope maintenance protein YghB;protein_id=WP_000268419.1;transl_table=11
NZ_JJLS01000248.1	RefSeq	gene	18552	19451	.	-	.	ID=gene-AC56_RS06920;Name=yqhC;gbkey=Gene;gene=yqhC;gene_biotype=protein_coding;locus_tag=AC56_RS06920;old_locus_tag=AC56_3376
NZ_JJLS01000248.1	Protein Homology	CDS	18552	19451	.	-	0	ID=cds-WP_032278922.1;Parent=gene-AC56_RS06920;Dbxref=GenBank:WP_032278922.1;Name=WP_032278922.1;gbkey=CDS;gene=yqhC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001407451.1;locus_tag=AC56_RS06920;product=DNA-binding transcriptional regulator YqhC;protein_id=WP_032278922.1;transl_table=11
NZ_JJLS01000248.1	RefSeq	gene	19645	20808	.	+	.	ID=gene-AC56_RS06915;Name=yqhD;gbkey=Gene;gene=yqhD;gene_biotype=protein_coding;locus_tag=AC56_RS06915;old_locus_tag=AC56_3378
NZ_JJLS01000248.1	Protein Homology	CDS	19645	20808	.	+	0	ID=cds-WP_001058802.1;Parent=gene-AC56_RS06915;Dbxref=GenBank:WP_001058802.1;Name=WP_001058802.1;Ontology_term=GO:0046872,GO:1990362;gbkey=CDS;gene=yqhD;go_function=metal ion binding|0046872||IEA,butanol dehydrogenase (NAD+) activity|1990362||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417484.1;locus_tag=AC56_RS06915;product=alcohol dehydrogenase;protein_id=WP_001058802.1;transl_table=11
NZ_JJLS01000248.1	RefSeq	gene	20913	21740	.	+	.	ID=gene-AC56_RS06910;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=AC56_RS06910;old_locus_tag=AC56_3379
NZ_JJLS01000248.1	Protein Homology	CDS	20913	21740	.	+	0	ID=cds-WP_000013149.1;Parent=gene-AC56_RS06910;Dbxref=GenBank:WP_000013149.1;Name=WP_000013149.1;Ontology_term=GO:0050580;gbkey=CDS;gene=dkgA;go_function=2%2C5-didehydrogluconate reductase activity|0050580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417485.4;locus_tag=AC56_RS06910;product=2%2C5-didehydrogluconate reductase DkgA;protein_id=WP_000013149.1;transl_table=11
NZ_JJLS01000248.1	RefSeq	gene	21940	22866	.	+	.	ID=gene-AC56_RS06905;Name=yqhG;gbkey=Gene;gene=yqhG;gene_biotype=protein_coding;locus_tag=AC56_RS06905;old_locus_tag=AC56_3381
NZ_JJLS01000248.1	Protein Homology	CDS	21940	22866	.	+	0	ID=cds-WP_000691619.1;Parent=gene-AC56_RS06905;Dbxref=GenBank:WP_000691619.1;Name=WP_000691619.1;gbkey=CDS;gene=yqhG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026195.1;locus_tag=AC56_RS06905;product=YbjP/YqhG family protein;protein_id=WP_000691619.1;transl_table=11
NZ_JJLS01000248.1	RefSeq	gene	22975	23350	.	+	.	ID=gene-AC56_RS06900;Name=AC56_RS06900;end_range=23350,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS06900;old_locus_tag=AC56_3382;partial=true
NZ_JJLS01000248.1	Protein Homology	CDS	22975	23350	.	+	0	ID=cds-WP_141012165.1-2;Parent=gene-AC56_RS06900;Dbxref=GenBank:WP_141012165.1;Name=WP_141012165.1;end_range=23350,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224844.1;locus_tag=AC56_RS06900;partial=true;product=transposase;protein_id=WP_141012165.1;transl_table=11
##sequence-region NZ_JJLS01000249.1 1 14801
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000249.1	RefSeq	region	1	14801	.	+	.	ID=NZ_JJLS01000249.1:1..14801;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000249.1	RefSeq	pseudogene	1	439	.	+	.	ID=gene-AC56_RS06895;Name=AC56_RS06895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS06895;old_locus_tag=AC56_3383;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000249.1	Protein Homology	CDS	1	439	.	+	1	ID=cds-AC56_RS06895;Parent=gene-AC56_RS06895;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS06895;partial=true;product=IS5-like element IS903B family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000249.1	RefSeq	gene	479	736	.	+	.	ID=gene-AC56_RS06890;Name=yqhH;gbkey=Gene;gene=yqhH;gene_biotype=protein_coding;locus_tag=AC56_RS06890;old_locus_tag=AC56_3384
NZ_JJLS01000249.1	Protein Homology	CDS	479	736	.	+	0	ID=cds-WP_032278931.1;Parent=gene-AC56_RS06890;Dbxref=GenBank:WP_032278931.1;Name=WP_032278931.1;gbkey=CDS;gene=yqhH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417487.1;locus_tag=AC56_RS06890;product=lipoprotein YqhH;protein_id=WP_032278931.1;transl_table=11
NZ_JJLS01000249.1	RefSeq	gene	779	2998	.	-	.	ID=gene-AC56_RS06885;Name=ygiQ;gbkey=Gene;gene=ygiQ;gene_biotype=protein_coding;locus_tag=AC56_RS06885;old_locus_tag=AC56_3385
NZ_JJLS01000249.1	Protein Homology	CDS	779	2998	.	-	0	ID=cds-WP_000095154.1;Parent=gene-AC56_RS06885;Dbxref=GenBank:WP_000095154.1;Name=WP_000095154.1;Ontology_term=GO:1904047;gbkey=CDS;gene=ygiQ;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026196.1;locus_tag=AC56_RS06885;product=YgiQ family radical SAM protein;protein_id=WP_000095154.1;transl_table=11
NZ_JJLS01000249.1	RefSeq	gene	3109	4521	.	-	.	ID=gene-AC56_RS06880;Name=ftsP;gbkey=Gene;gene=ftsP;gene_biotype=protein_coding;locus_tag=AC56_RS06880;old_locus_tag=AC56_3386
NZ_JJLS01000249.1	Protein Homology	CDS	3109	4521	.	-	0	ID=cds-WP_032278932.1;Parent=gene-AC56_RS06880;Dbxref=GenBank:WP_032278932.1;Name=WP_032278932.1;Ontology_term=GO:0043093,GO:0016491;gbkey=CDS;gene=ftsP;go_function=oxidoreductase activity|0016491||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417489.1;locus_tag=AC56_RS06880;product=cell division protein FtsP;protein_id=WP_032278932.1;transl_table=11
NZ_JJLS01000249.1	RefSeq	gene	4596	5333	.	-	.	ID=gene-AC56_RS06875;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;gene_synonym=parF;locus_tag=AC56_RS06875;old_locus_tag=AC56_3387
NZ_JJLS01000249.1	Protein Homology	CDS	4596	5333	.	-	0	ID=cds-WP_000965712.1;Parent=gene-AC56_RS06875;Dbxref=GenBank:WP_000965712.1;Name=WP_000965712.1;gbkey=CDS;gene=plsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311929.1;locus_tag=AC56_RS06875;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=WP_000965712.1;transl_table=11
NZ_JJLS01000249.1	RefSeq	gene	5567	7825	.	-	.	ID=gene-AC56_RS06870;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=AC56_RS06870;old_locus_tag=AC56_3388
NZ_JJLS01000249.1	Protein Homology	CDS	5567	7825	.	-	0	ID=cds-WP_001281881.1;Parent=gene-AC56_RS06870;Dbxref=GenBank:WP_001281881.1;Name=WP_001281881.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311930.1;locus_tag=AC56_RS06870;product=DNA topoisomerase IV subunit A;protein_id=WP_001281881.1;transl_table=11
NZ_JJLS01000249.1	RefSeq	gene	7963	9570	.	-	.	ID=gene-AC56_RS06865;Name=ygiS;gbkey=Gene;gene=ygiS;gene_biotype=protein_coding;locus_tag=AC56_RS06865;old_locus_tag=AC56_3389
NZ_JJLS01000249.1	Protein Homology	CDS	7963	9570	.	-	0	ID=cds-WP_032278933.1;Parent=gene-AC56_RS06865;Dbxref=GenBank:WP_032278933.1;Name=WP_032278933.1;gbkey=CDS;gene=ygiS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417492.1;locus_tag=AC56_RS06865;product=ABC transporter substrate-binding protein;protein_id=WP_032278933.1;transl_table=11
NZ_JJLS01000249.1	RefSeq	gene	9703	10098	.	-	.	ID=gene-AC56_RS06860;Name=mqsA;gbkey=Gene;gene=mqsA;gene_biotype=protein_coding;locus_tag=AC56_RS06860;old_locus_tag=AC56_3390
NZ_JJLS01000249.1	Protein Homology	CDS	9703	10098	.	-	0	ID=cds-WP_000650107.1;Parent=gene-AC56_RS06860;Dbxref=GenBank:WP_000650107.1;Name=WP_000650107.1;gbkey=CDS;gene=mqsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417493.1;locus_tag=AC56_RS06860;product=type II toxin-antitoxin system antitoxin MqsA;protein_id=WP_000650107.1;transl_table=11
NZ_JJLS01000249.1	RefSeq	gene	10100	10396	.	-	.	ID=gene-AC56_RS0126895;Name=mqsR;gbkey=Gene;gene=mqsR;gene_biotype=protein_coding;locus_tag=AC56_RS0126895
NZ_JJLS01000249.1	Protein Homology	CDS	10100	10396	.	-	0	ID=cds-WP_000415584.1;Parent=gene-AC56_RS0126895;Dbxref=GenBank:WP_000415584.1;Name=WP_000415584.1;gbkey=CDS;gene=mqsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417494.1;locus_tag=AC56_RS0126895;product=type II toxin-antitoxin system toxin MqsR;protein_id=WP_000415584.1;transl_table=11
NZ_JJLS01000249.1	RefSeq	gene	10601	11083	.	-	.	ID=gene-AC56_RS06855;Name=ygiV;gbkey=Gene;gene=ygiV;gene_biotype=protein_coding;locus_tag=AC56_RS06855;old_locus_tag=AC56_3391
NZ_JJLS01000249.1	Protein Homology	CDS	10601	11083	.	-	0	ID=cds-WP_000183489.1;Parent=gene-AC56_RS06855;Dbxref=GenBank:WP_000183489.1;Name=WP_000183489.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;gene=ygiV;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708835.1;locus_tag=AC56_RS06855;product=AraC family transcriptional regulator;protein_id=WP_000183489.1;transl_table=11
NZ_JJLS01000249.1	RefSeq	gene	11136	11528	.	-	.	ID=gene-AC56_RS06850;Name=ygiW;gbkey=Gene;gene=ygiW;gene_biotype=protein_coding;locus_tag=AC56_RS06850;old_locus_tag=AC56_3392
NZ_JJLS01000249.1	Protein Homology	CDS	11136	11528	.	-	0	ID=cds-WP_000712658.1;Parent=gene-AC56_RS06850;Dbxref=GenBank:WP_000712658.1;Name=WP_000712658.1;gbkey=CDS;gene=ygiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311933.1;locus_tag=AC56_RS06850;product=OB fold stress tolerance protein YgiW;protein_id=WP_000712658.1;transl_table=11
NZ_JJLS01000249.1	RefSeq	gene	11680	12339	.	+	.	ID=gene-AC56_RS06845;Name=qseB;gbkey=Gene;gene=qseB;gene_biotype=protein_coding;locus_tag=AC56_RS06845;old_locus_tag=AC56_3393
NZ_JJLS01000249.1	Protein Homology	CDS	11680	12339	.	+	0	ID=cds-WP_001221502.1;Parent=gene-AC56_RS06845;Dbxref=GenBank:WP_001221502.1;Name=WP_001221502.1;gbkey=CDS;gene=qseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311934.1;locus_tag=AC56_RS06845;product=quorum sensing response regulator transcription factor QseB;protein_id=WP_001221502.1;transl_table=11
NZ_JJLS01000249.1	RefSeq	gene	12336	13685	.	+	.	ID=gene-AC56_RS06840;Name=qseC;gbkey=Gene;gene=qseC;gene_biotype=protein_coding;locus_tag=AC56_RS06840;old_locus_tag=AC56_3394
NZ_JJLS01000249.1	Protein Homology	CDS	12336	13685	.	+	0	ID=cds-WP_000673357.1;Parent=gene-AC56_RS06840;Dbxref=GenBank:WP_000673357.1;Name=WP_000673357.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=qseC;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417498.1;locus_tag=AC56_RS06840;product=quorum sensing histidine kinase QseC;protein_id=WP_000673357.1;transl_table=11
NZ_JJLS01000249.1	RefSeq	gene	13731	14063	.	-	.	ID=gene-AC56_RS0126900;Name=ygiZ;gbkey=Gene;gene=ygiZ;gene_biotype=protein_coding;locus_tag=AC56_RS0126900
NZ_JJLS01000249.1	Protein Homology	CDS	13731	14063	.	-	0	ID=cds-WP_000917684.1;Parent=gene-AC56_RS0126900;Dbxref=GenBank:WP_000917684.1;Name=WP_000917684.1;gbkey=CDS;gene=ygiZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417499.1;locus_tag=AC56_RS0126900;product=DUF2645 family protein;protein_id=WP_000917684.1;transl_table=11
NZ_JJLS01000249.1	RefSeq	pseudogene	14389	14801	.	+	.	ID=gene-AC56_RS06835;Name=AC56_RS06835;end_range=14801,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS06835;old_locus_tag=AC56_3396;partial=true;pseudo=true
NZ_JJLS01000249.1	Protein Homology	CDS	14389	14801	.	+	0	ID=cds-AC56_RS06835;Parent=gene-AC56_RS06835;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=14801,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS06835;partial=true;product=IS5-like element ISKpn26 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000250.1 1 13748
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000250.1	RefSeq	region	1	13748	.	+	.	ID=NZ_JJLS01000250.1:1..13748;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000250.1	RefSeq	gene	1	311	.	+	.	ID=gene-AC56_RS06830;Name=AC56_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS06830;old_locus_tag=AC56_3397;partial=true;start_range=.,1
NZ_JJLS01000250.1	Protein Homology	CDS	1	311	.	+	2	ID=cds-WP_032278430.1;Parent=gene-AC56_RS06830;Dbxref=GenBank:WP_032278430.1;Name=WP_032278430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS06830;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032278430.1;start_range=.,1;transl_table=11
NZ_JJLS01000250.1	RefSeq	gene	293	493	.	+	.	ID=gene-AC56_RS33795;Name=AC56_RS33795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33795
NZ_JJLS01000250.1	Protein Homology	CDS	293	493	.	+	0	ID=cds-WP_349237787.1;Parent=gene-AC56_RS33795;Dbxref=GenBank:WP_349237787.1;Name=WP_349237787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001340336.1;locus_tag=AC56_RS33795;product=hypothetical protein;protein_id=WP_349237787.1;transl_table=11
NZ_JJLS01000250.1	RefSeq	pseudogene	524	1104	.	+	.	ID=gene-AC56_RS32320;Name=mdaB;gbkey=Gene;gene=mdaB;gene_biotype=pseudogene;locus_tag=AC56_RS32320;pseudo=true
NZ_JJLS01000250.1	Protein Homology	CDS	524	1104	.	+	0	ID=cds-AC56_RS32320;Parent=gene-AC56_RS32320;Note=frameshifted;gbkey=CDS;gene=mdaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311937.1;locus_tag=AC56_RS32320;product=NADPH:quinone oxidoreductase MdaB;pseudo=true;transl_table=11
NZ_JJLS01000250.1	RefSeq	gene	1135	1449	.	+	.	ID=gene-AC56_RS06825;Name=AC56_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS06825;old_locus_tag=AC56_3401
NZ_JJLS01000250.1	Protein Homology	CDS	1135	1449	.	+	0	ID=cds-WP_000958598.1;Parent=gene-AC56_RS06825;Dbxref=GenBank:WP_000958598.1;Name=WP_000958598.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311938.1;locus_tag=AC56_RS06825;product=putative quinol monooxygenase;protein_id=WP_000958598.1;transl_table=11
NZ_JJLS01000250.1	RefSeq	gene	1497	3389	.	-	.	ID=gene-AC56_RS06820;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=AC56_RS06820;old_locus_tag=AC56_3402
NZ_JJLS01000250.1	Protein Homology	CDS	1497	3389	.	-	0	ID=cds-WP_000195296.1;Parent=gene-AC56_RS06820;Dbxref=GenBank:WP_000195296.1;Name=WP_000195296.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417502.1;locus_tag=AC56_RS06820;product=DNA topoisomerase IV subunit B;protein_id=WP_000195296.1;transl_table=11
NZ_JJLS01000250.1	RefSeq	gene	3418	3999	.	-	.	ID=gene-AC56_RS06815;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;locus_tag=AC56_RS06815;old_locus_tag=AC56_3403
NZ_JJLS01000250.1	Protein Homology	CDS	3418	3999	.	-	0	ID=cds-WP_000105733.1;Parent=gene-AC56_RS06815;Dbxref=GenBank:WP_000105733.1;Name=WP_000105733.1;gbkey=CDS;gene=yqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311946.1;locus_tag=AC56_RS06815;product=esterase YqiA;protein_id=WP_000105733.1;transl_table=11
NZ_JJLS01000250.1	RefSeq	gene	3999	4826	.	-	.	ID=gene-AC56_RS06810;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=AC56_RS06810;old_locus_tag=AC56_3404
NZ_JJLS01000250.1	Protein Homology	CDS	3999	4826	.	-	0	ID=cds-WP_000444747.1;Parent=gene-AC56_RS06810;Dbxref=GenBank:WP_000444747.1;Name=WP_000444747.1;Ontology_term=GO:0004115;gbkey=CDS;gene=cpdA;go_function=3'%2C5'-cyclic-AMP phosphodiesterase activity|0004115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311947.1;locus_tag=AC56_RS06810;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=WP_000444747.1;transl_table=11
NZ_JJLS01000250.1	RefSeq	gene	4851	5273	.	-	.	ID=gene-AC56_RS06805;Name=AC56_RS06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS06805;old_locus_tag=AC56_3405
NZ_JJLS01000250.1	Protein Homology	CDS	4851	5273	.	-	0	ID=cds-WP_000833393.1;Parent=gene-AC56_RS06805;Dbxref=GenBank:WP_000833393.1;Name=WP_000833393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311948.1;locus_tag=AC56_RS06805;product=DUF1249 family protein;protein_id=WP_000833393.1;transl_table=11
NZ_JJLS01000250.1	RefSeq	gene	5274	5903	.	-	.	ID=gene-AC56_RS06800;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=AC56_RS06800;old_locus_tag=AC56_3406
NZ_JJLS01000250.1	Protein Homology	CDS	5274	5903	.	-	0	ID=cds-WP_000917138.1;Parent=gene-AC56_RS06800;Dbxref=GenBank:WP_000917138.1;Name=WP_000917138.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;gene=nudF;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311949.1;locus_tag=AC56_RS06800;product=ADP-ribose diphosphatase;protein_id=WP_000917138.1;transl_table=11
NZ_JJLS01000250.1	RefSeq	gene	6108	7589	.	+	.	ID=gene-AC56_RS06795;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;locus_tag=AC56_RS06795;old_locus_tag=AC56_3407
NZ_JJLS01000250.1	Protein Homology	CDS	6108	7589	.	+	0	ID=cds-WP_000735278.1;Parent=gene-AC56_RS06795;Dbxref=GenBank:WP_000735278.1;Name=WP_000735278.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;gene=tolC;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417507.2;locus_tag=AC56_RS06795;product=outer membrane channel protein TolC;protein_id=WP_000735278.1;transl_table=11
NZ_JJLS01000250.1	RefSeq	gene	7737	8408	.	+	.	ID=gene-AC56_RS06790;Name=AC56_RS06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS06790;old_locus_tag=AC56_3408
NZ_JJLS01000250.1	Protein Homology	CDS	7737	8408	.	+	0	ID=cds-WP_000831543.1;Parent=gene-AC56_RS06790;Dbxref=GenBank:WP_000831543.1;Name=WP_000831543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417509.3;locus_tag=AC56_RS06790;product=DUF1190 family protein;protein_id=WP_000831543.1;transl_table=11
NZ_JJLS01000250.1	RefSeq	gene	8414	9574	.	+	.	ID=gene-AC56_RS06785;Name=AC56_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS06785;old_locus_tag=AC56_3409
NZ_JJLS01000250.1	Protein Homology	CDS	8414	9574	.	+	0	ID=cds-WP_000442860.1;Parent=gene-AC56_RS06785;Dbxref=GenBank:WP_000442860.1;Name=WP_000442860.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123077.1;locus_tag=AC56_RS06785;product=glutathionylspermidine synthase family protein;protein_id=WP_000442860.1;transl_table=11
NZ_JJLS01000250.1	RefSeq	gene	9612	10400	.	-	.	ID=gene-AC56_RS06780;Name=ygiD;gbkey=Gene;gene=ygiD;gene_biotype=protein_coding;locus_tag=AC56_RS06780;old_locus_tag=AC56_3410
NZ_JJLS01000250.1	Protein Homology	CDS	9612	10400	.	-	0	ID=cds-WP_032278935.1;Parent=gene-AC56_RS06780;Dbxref=GenBank:WP_032278935.1;Name=WP_032278935.1;gbkey=CDS;gene=ygiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001356237.1;locus_tag=AC56_RS06780;product=4%2C5-DOPA dioxygenase extradiol;protein_id=WP_032278935.1;transl_table=11
NZ_JJLS01000250.1	RefSeq	gene	10543	11316	.	+	.	ID=gene-AC56_RS06775;Name=zupT;gbkey=Gene;gene=zupT;gene_biotype=protein_coding;locus_tag=AC56_RS06775;old_locus_tag=AC56_3411
NZ_JJLS01000250.1	Protein Homology	CDS	10543	11316	.	+	0	ID=cds-WP_001295627.1;Parent=gene-AC56_RS06775;Dbxref=GenBank:WP_001295627.1;Name=WP_001295627.1;gbkey=CDS;gene=zupT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311955.1;locus_tag=AC56_RS06775;product=zinc transporter ZupT;protein_id=WP_001295627.1;transl_table=11
NZ_JJLS01000250.1	RefSeq	gene	11374	11544	.	-	.	ID=gene-AC56_RS06770;Name=yqiD;gbkey=Gene;gene=yqiD;gene_biotype=protein_coding;locus_tag=AC56_RS06770;old_locus_tag=AC56_3412
NZ_JJLS01000250.1	Protein Homology	CDS	11374	11544	.	-	0	ID=cds-WP_000469266.1;Parent=gene-AC56_RS06770;Dbxref=GenBank:WP_000469266.1;Name=WP_000469266.1;gbkey=CDS;gene=yqiD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518818.1;locus_tag=AC56_RS06770;product=protein YqiD;protein_id=WP_000469266.1;transl_table=11
NZ_JJLS01000250.1	RefSeq	gene	11806	12459	.	-	.	ID=gene-AC56_RS06765;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=AC56_RS06765;old_locus_tag=AC56_3413
NZ_JJLS01000250.1	Protein Homology	CDS	11806	12459	.	-	0	ID=cds-WP_001076997.1;Parent=gene-AC56_RS06765;Dbxref=GenBank:WP_001076997.1;Name=WP_001076997.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311956.1;locus_tag=AC56_RS06765;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_001076997.1;transl_table=11
NZ_JJLS01000250.1	cmsearch	riboswitch	12563	12711	.	-	.	ID=id-NZ_JJLS01000250.1:12563..12711;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_JJLS01000250.1	RefSeq	gene	12833	13123	.	+	.	ID=gene-AC56_RS06760;Name=ubiK;gbkey=Gene;gene=ubiK;gene_biotype=protein_coding;gene_synonym=yqiC;locus_tag=AC56_RS06760;old_locus_tag=AC56_3414
NZ_JJLS01000250.1	Protein Homology	CDS	12833	13123	.	+	0	ID=cds-WP_001295626.1;Parent=gene-AC56_RS06760;Dbxref=GenBank:WP_001295626.1;Name=WP_001295626.1;Ontology_term=GO:0006744,GO:0042802;gbkey=CDS;gene=ubiK;go_function=identical protein binding|0042802||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417514.4;locus_tag=AC56_RS06760;product=ubiquinone biosynthesis accessory factor UbiK;protein_id=WP_001295626.1;transl_table=11
NZ_JJLS01000250.1	RefSeq	gene	13359	13748	.	+	.	ID=gene-AC56_RS06755;Name=AC56_RS06755;end_range=13748,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS06755;old_locus_tag=AC56_3415;partial=true
NZ_JJLS01000250.1	Protein Homology	CDS	13359	13748	.	+	0	ID=cds-WP_032192161.1;Parent=gene-AC56_RS06755;Dbxref=GenBank:WP_032192161.1;Name=WP_032192161.1;end_range=13748,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS06755;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032192161.1;transl_table=11
##sequence-region NZ_JJLS01000251.1 1 1484
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000251.1	RefSeq	region	1	1484	.	+	.	ID=NZ_JJLS01000251.1:1..1484;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000251.1	RefSeq	gene	1	202	.	+	.	ID=gene-AC56_RS0126915;Name=AC56_RS0126915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0126915;old_locus_tag=AC56_3416;partial=true;start_range=.,1
NZ_JJLS01000251.1	Protein Homology	CDS	1	202	.	+	1	ID=cds-WP_162752776.1;Parent=gene-AC56_RS0126915;Dbxref=GenBank:WP_162752776.1;Name=WP_162752776.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS0126915;partial=true;product=transposase;protein_id=WP_162752776.1;start_range=.,1;transl_table=11
NZ_JJLS01000251.1	RefSeq	pseudogene	351	1007	.	+	.	ID=gene-AC56_RS06750;Name=AC56_RS06750;end_range=1007,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS06750;old_locus_tag=AC56_3418;partial=true;pseudo=true;start_range=.,351
NZ_JJLS01000251.1	Protein Homology	CDS	351	1007	.	+	0	ID=cds-AC56_RS06750;Parent=gene-AC56_RS06750;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0009297,GO:0015473,GO:0016020;end_range=1007,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001480735.1;locus_tag=AC56_RS06750;partial=true;product=fimbria/pilus outer membrane usher protein;pseudo=true;start_range=.,351;transl_table=11
NZ_JJLS01000251.1	RefSeq	gene	1041	1484	.	+	.	ID=gene-AC56_RS06745;Name=AC56_RS06745;end_range=1484,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS06745;old_locus_tag=AC56_3419;partial=true
NZ_JJLS01000251.1	Protein Homology	CDS	1041	1484	.	+	0	ID=cds-WP_032282877.1-2;Parent=gene-AC56_RS06745;Dbxref=GenBank:WP_032282877.1;Name=WP_032282877.1;Ontology_term=GO:0004803;end_range=1484,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS06745;partial=true;product=IS5 family transposase;protein_id=WP_032282877.1;transl_table=11
##sequence-region NZ_JJLS01000252.1 1 2027
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000252.1	RefSeq	region	1	2027	.	+	.	ID=NZ_JJLS01000252.1:1..2027;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000252.1	RefSeq	pseudogene	1	496	.	+	.	ID=gene-AC56_RS06740;Name=AC56_RS06740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS06740;old_locus_tag=AC56_3420;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000252.1	Protein Homology	CDS	1	496	.	+	1	ID=cds-AC56_RS06740;Parent=gene-AC56_RS06740;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS06740;partial=true;product=IS5-like element IS903 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000252.1	RefSeq	gene	625	825	.	-	.	ID=gene-AC56_RS06735;Name=glgS;gbkey=Gene;gene=glgS;gene_biotype=protein_coding;locus_tag=AC56_RS06735;old_locus_tag=AC56_3421
NZ_JJLS01000252.1	Protein Homology	CDS	625	825	.	-	0	ID=cds-WP_000350095.1;Parent=gene-AC56_RS06735;Dbxref=GenBank:WP_000350095.1;Name=WP_000350095.1;gbkey=CDS;gene=glgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417521.1;locus_tag=AC56_RS06735;product=cell surface composition regulator GlgS;protein_id=WP_000350095.1;transl_table=11
NZ_JJLS01000252.1	RefSeq	pseudogene	1094	1564	.	+	.	ID=gene-AC56_RS06730;Name=AC56_RS06730;end_range=1564,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS06730;old_locus_tag=AC56_3422;partial=true;pseudo=true
NZ_JJLS01000252.1	Protein Homology	CDS	1094	1564	.	+	0	ID=cds-AC56_RS06730;Parent=gene-AC56_RS06730;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1564,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417522.1;locus_tag=AC56_RS06730;partial=true;product=OB-fold-containig protein;pseudo=true;transl_table=11
NZ_JJLS01000252.1	RefSeq	pseudogene	1621	2027	.	+	.	ID=gene-AC56_RS0126925;Name=AC56_RS0126925;end_range=2027,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0126925;partial=true;pseudo=true
NZ_JJLS01000252.1	Protein Homology	CDS	1621	2027	.	+	0	ID=cds-AC56_RS0126925;Parent=gene-AC56_RS0126925;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=2027,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS0126925;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000253.1 1 53723
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000253.1	RefSeq	region	1	53723	.	+	.	ID=NZ_JJLS01000253.1:1..53723;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000253.1	RefSeq	gene	1	463	.	+	.	ID=gene-AC56_RS06725;Name=AC56_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS06725;old_locus_tag=AC56_3424;partial=true;start_range=.,1
NZ_JJLS01000253.1	Protein Homology	CDS	1	463	.	+	1	ID=cds-WP_032282853.1;Parent=gene-AC56_RS06725;Dbxref=GenBank:WP_032282853.1;Name=WP_032282853.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=AC56_RS06725;partial=true;product=IS1 family transposase;protein_id=WP_032282853.1;start_range=.,1;transl_table=11
NZ_JJLS01000253.1	RefSeq	pseudogene	478	645	.	+	.	ID=gene-AC56_RS30070;Name=AC56_RS30070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS30070;partial=true;pseudo=true;start_range=.,478
NZ_JJLS01000253.1	Protein Homology	CDS	478	645	.	+	0	ID=cds-AC56_RS30070;Parent=gene-AC56_RS30070;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417522.1;locus_tag=AC56_RS30070;partial=true;product=OB-fold-containig protein;pseudo=true;start_range=.,478;transl_table=11
NZ_JJLS01000253.1	RefSeq	gene	672	2333	.	+	.	ID=gene-AC56_RS06720;Name=yqiK;gbkey=Gene;gene=yqiK;gene_biotype=protein_coding;locus_tag=AC56_RS06720;old_locus_tag=AC56_3425
NZ_JJLS01000253.1	Protein Homology	CDS	672	2333	.	+	0	ID=cds-WP_032278950.1;Parent=gene-AC56_RS06720;Dbxref=GenBank:WP_032278950.1;Name=WP_032278950.1;Ontology_term=GO:0016020,GO:0016600;gbkey=CDS;gene=yqiK;go_component=membrane|0016020||IEA,flotillin complex|0016600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417523.1;locus_tag=AC56_RS06720;product=flotillin family protein;protein_id=WP_032278950.1;transl_table=11
NZ_JJLS01000253.1	RefSeq	gene	2572	2631	.	+	.	ID=gene-AC56_RS32330;Name=AC56_RS32330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS32330
NZ_JJLS01000253.1	Protein Homology	CDS	2572	2631	.	+	0	ID=cds-WP_001387081.1;Parent=gene-AC56_RS32330;Dbxref=GenBank:WP_001387081.1;Name=WP_001387081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791256.1;locus_tag=AC56_RS32330;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_001387081.1;transl_table=11
NZ_JJLS01000253.1	RefSeq	gene	2947	3006	.	+	.	ID=gene-AC56_RS32340;Name=ibsE;gbkey=Gene;gene=ibsE;gene_biotype=protein_coding;locus_tag=AC56_RS32340
NZ_JJLS01000253.1	Protein Homology	CDS	2947	3006	.	+	0	ID=cds-WP_001387082.1;Parent=gene-AC56_RS32340;Dbxref=GenBank:WP_001387082.1;Name=WP_001387082.1;gbkey=CDS;gene=ibsE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791257.1;locus_tag=AC56_RS32340;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_001387082.1;transl_table=11
NZ_JJLS01000253.1	RefSeq	gene	3126	4559	.	-	.	ID=gene-AC56_RS06715;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=AC56_RS06715;old_locus_tag=AC56_3426
NZ_JJLS01000253.1	Protein Homology	CDS	3126	4559	.	-	0	ID=cds-WP_000869178.1;Parent=gene-AC56_RS06715;Dbxref=GenBank:WP_000869178.1;Name=WP_000869178.1;Ontology_term=GO:0005975,GO:0009058,GO:0016779;gbkey=CDS;gene=hldE;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417524.1;locus_tag=AC56_RS06715;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=WP_000869178.1;transl_table=11
NZ_JJLS01000253.1	RefSeq	gene	4607	7447	.	-	.	ID=gene-AC56_RS06710;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=AC56_RS06710;old_locus_tag=AC56_3427
NZ_JJLS01000253.1	Protein Homology	CDS	4607	7447	.	-	0	ID=cds-WP_032278951.1;Parent=gene-AC56_RS06710;Dbxref=GenBank:WP_032278951.1;Name=WP_032278951.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417525.1;locus_tag=AC56_RS06710;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_032278951.1;transl_table=11
NZ_JJLS01000253.1	RefSeq	gene	7470	8771	.	-	.	ID=gene-AC56_RS06705;Name=ygiF;gbkey=Gene;gene=ygiF;gene_biotype=protein_coding;locus_tag=AC56_RS06705;old_locus_tag=AC56_3428
NZ_JJLS01000253.1	Protein Homology	CDS	7470	8771	.	-	0	ID=cds-WP_000046281.1;Parent=gene-AC56_RS06705;Dbxref=GenBank:WP_000046281.1;Name=WP_000046281.1;gbkey=CDS;gene=ygiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417526.1;locus_tag=AC56_RS06705;product=inorganic triphosphatase;protein_id=WP_000046281.1;transl_table=11
NZ_JJLS01000253.1	RefSeq	gene	9013	9633	.	+	.	ID=gene-AC56_RS06695;Name=ygiM;gbkey=Gene;gene=ygiM;gene_biotype=protein_coding;locus_tag=AC56_RS06695;old_locus_tag=AC56_3430
NZ_JJLS01000253.1	Protein Homology	CDS	9013	9633	.	+	0	ID=cds-WP_001125331.1;Parent=gene-AC56_RS06695;Dbxref=GenBank:WP_001125331.1;Name=WP_001125331.1;gbkey=CDS;gene=ygiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311965.1;locus_tag=AC56_RS06695;product=TIGR04211 family SH3 domain-containing protein;protein_id=WP_001125331.1;transl_table=11
NZ_JJLS01000253.1	RefSeq	gene	9697	10935	.	+	.	ID=gene-AC56_RS06690;Name=cca;gbkey=Gene;gene=cca;gene_biotype=protein_coding;locus_tag=AC56_RS06690;old_locus_tag=AC56_3431
NZ_JJLS01000253.1	Protein Homology	CDS	9697	10935	.	+	0	ID=cds-WP_000708487.1;Parent=gene-AC56_RS06690;Dbxref=GenBank:WP_000708487.1;Name=WP_000708487.1;gbkey=CDS;gene=cca;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417528.1;locus_tag=AC56_RS06690;product=fused tRNA nucleotidyltransferase/2'%2C3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase Cca;protein_id=WP_000708487.1;transl_table=11
NZ_JJLS01000253.1	RefSeq	gene	11116	11937	.	-	.	ID=gene-AC56_RS06685;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=AC56_RS06685;old_locus_tag=AC56_3432
NZ_JJLS01000253.1	Protein Homology	CDS	11116	11937	.	-	0	ID=cds-WP_001281927.1;Parent=gene-AC56_RS06685;Dbxref=GenBank:WP_001281927.1;Name=WP_001281927.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;gene=bacA;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311967.1;locus_tag=AC56_RS06685;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001281927.1;transl_table=11
NZ_JJLS01000253.1	RefSeq	gene	12027	12395	.	-	.	ID=gene-AC56_RS06680;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=AC56_RS06680;old_locus_tag=AC56_3433
NZ_JJLS01000253.1	Protein Homology	CDS	12027	12395	.	-	0	ID=cds-WP_001295541.1;Parent=gene-AC56_RS06680;Dbxref=GenBank:WP_001295541.1;Name=WP_001295541.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708868.2;locus_tag=AC56_RS06680;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;protein_id=WP_001295541.1;transl_table=11
NZ_JJLS01000253.1	RefSeq	gene	12500	13117	.	+	.	ID=gene-AC56_RS06675;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=AC56_RS06675;old_locus_tag=AC56_3434
NZ_JJLS01000253.1	Protein Homology	CDS	12500	13117	.	+	0	ID=cds-WP_001272796.1;Parent=gene-AC56_RS06675;Dbxref=GenBank:WP_001272796.1;Name=WP_001272796.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311969.1;locus_tag=AC56_RS06675;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_001272796.1;transl_table=11
NZ_JJLS01000253.1	RefSeq	gene	13130	14062	.	-	.	ID=gene-AC56_RS06670;Name=ttdR;gbkey=Gene;gene=ttdR;gene_biotype=protein_coding;locus_tag=AC56_RS06670;old_locus_tag=AC56_3435
NZ_JJLS01000253.1	Protein Homology	CDS	13130	14062	.	-	0	ID=cds-WP_000935206.1;Parent=gene-AC56_RS06670;Dbxref=GenBank:WP_000935206.1;Name=WP_000935206.1;Ontology_term=GO:0045893,GO:0003700,GO:0043565;gbkey=CDS;gene=ttdR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417532.1;locus_tag=AC56_RS06670;product=L-tartrate utilization transcriptional activator TtdR;protein_id=WP_000935206.1;transl_table=11
NZ_JJLS01000253.1	RefSeq	gene	14269	15180	.	+	.	ID=gene-AC56_RS06665;Name=ttdA;gbkey=Gene;gene=ttdA;gene_biotype=protein_coding;locus_tag=AC56_RS06665;old_locus_tag=AC56_3437
NZ_JJLS01000253.1	Protein Homology	CDS	14269	15180	.	+	0	ID=cds-WP_000986797.1;Parent=gene-AC56_RS06665;Dbxref=GenBank:WP_000986797.1;Name=WP_000986797.1;Ontology_term=GO:0008730;gbkey=CDS;gene=ttdA;go_function=L(+)-tartrate dehydratase activity|0008730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417533.1;locus_tag=AC56_RS06665;product=L(+)-tartrate dehydratase subunit alpha;protein_id=WP_000986797.1;transl_table=11
NZ_JJLS01000253.1	RefSeq	gene	15177	15782	.	+	.	ID=gene-AC56_RS06660;Name=ttdB;gbkey=Gene;gene=ttdB;gene_biotype=protein_coding;locus_tag=AC56_RS06660;old_locus_tag=AC56_3438
NZ_JJLS01000253.1	Protein Homology	CDS	15177	15782	.	+	0	ID=cds-WP_000722957.1;Parent=gene-AC56_RS06660;Dbxref=GenBank:WP_000722957.1;Name=WP_000722957.1;Ontology_term=GO:0016836;gbkey=CDS;gene=ttdB;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417534.1;locus_tag=AC56_RS06660;product=L(+)-tartrate dehydratase subunit beta;protein_id=WP_000722957.1;transl_table=11
NZ_JJLS01000253.1	RefSeq	gene	15830	17293	.	+	.	ID=gene-AC56_RS06655;Name=ttdT;gbkey=Gene;gene=ttdT;gene_biotype=protein_coding;locus_tag=AC56_RS06655;old_locus_tag=AC56_3439
NZ_JJLS01000253.1	Protein Homology	CDS	15830	17293	.	+	0	ID=cds-WP_000804973.1;Parent=gene-AC56_RS06655;Dbxref=GenBank:WP_000804973.1;Name=WP_000804973.1;gbkey=CDS;gene=ttdT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417535.1;locus_tag=AC56_RS06655;product=L-tartrate/succinate antiporter;protein_id=WP_000804973.1;transl_table=11
NZ_JJLS01000253.1	RefSeq	gene	17336	18349	.	-	.	ID=gene-AC56_RS06650;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=AC56_RS06650;old_locus_tag=AC56_3440
NZ_JJLS01000253.1	Protein Homology	CDS	17336	18349	.	-	0	ID=cds-WP_032173538.1;Parent=gene-AC56_RS06650;Dbxref=GenBank:WP_032173538.1;Name=WP_032173538.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001264383.1;locus_tag=AC56_RS06650;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_032173538.1;transl_table=11
NZ_JJLS01000253.1	RefSeq	gene	18587	18802	.	+	.	ID=gene-AC56_RS06645;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=AC56_RS06645;old_locus_tag=AC56_3441
NZ_JJLS01000253.1	Protein Homology	CDS	18587	18802	.	+	0	ID=cds-WP_001144069.1;Parent=gene-AC56_RS06645;Dbxref=GenBank:WP_001144069.1;Name=WP_001144069.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311975.1;locus_tag=AC56_RS06645;product=30S ribosomal protein S21;protein_id=WP_001144069.1;transl_table=11
NZ_JJLS01000253.1	RefSeq	gene	18913	20658	.	+	.	ID=gene-AC56_RS06640;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=AC56_RS06640;old_locus_tag=AC56_3442
NZ_JJLS01000253.1	Protein Homology	CDS	18913	20658	.	+	0	ID=cds-WP_000918827.1;Parent=gene-AC56_RS06640;Dbxref=GenBank:WP_000918827.1;Name=WP_000918827.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311976.1;locus_tag=AC56_RS06640;product=DNA primase;protein_id=WP_000918827.1;transl_table=11
NZ_JJLS01000253.1	RefSeq	gene	20853	22694	.	+	.	ID=gene-AC56_RS06635;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=AC56_RS06635;old_locus_tag=AC56_3443
NZ_JJLS01000253.1	Protein Homology	CDS	20853	22694	.	+	0	ID=cds-WP_000437375.1;Parent=gene-AC56_RS06635;Dbxref=GenBank:WP_000437375.1;Name=WP_000437375.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311977.1;locus_tag=AC56_RS06635;product=RNA polymerase sigma factor RpoD;protein_id=WP_000437375.1;transl_table=11
NZ_JJLS01000253.1	RefSeq	gene	22773	23279	.	-	.	ID=gene-AC56_RS06630;Name=mug;gbkey=Gene;gene=mug;gene_biotype=protein_coding;locus_tag=AC56_RS06630;old_locus_tag=AC56_3444
NZ_JJLS01000253.1	Protein Homology	CDS	22773	23279	.	-	0	ID=cds-WP_000228937.1;Parent=gene-AC56_RS06630;Dbxref=GenBank:WP_000228937.1;Name=WP_000228937.1;Ontology_term=GO:0006285,GO:0000700;gbkey=CDS;gene=mug;go_function=mismatch base pair DNA N-glycosylase activity|0000700||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417540.1;locus_tag=AC56_RS06630;product=G/U mismatch-specific DNA glycosylase;protein_id=WP_000228937.1;transl_table=11
NZ_JJLS01000253.1	RefSeq	gene	23404	23479	.	+	.	ID=gene-AC56_RS06625;Name=AC56_RS06625;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS06625;old_locus_tag=AC56_3445
NZ_JJLS01000253.1	tRNAscan-SE	tRNA	23404	23479	.	+	.	ID=rna-AC56_RS06625;Parent=gene-AC56_RS06625;anticodon=(pos:23437..23439);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS06625;product=tRNA-Ile
NZ_JJLS01000253.1	tRNAscan-SE	exon	23404	23479	.	+	.	ID=exon-AC56_RS06625-1;Parent=rna-AC56_RS06625;anticodon=(pos:23437..23439);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS06625;product=tRNA-Ile
NZ_JJLS01000253.1	RefSeq	gene	23533	24297	.	-	.	ID=gene-AC56_RS06620;Name=nfeF;gbkey=Gene;gene=nfeF;gene_biotype=protein_coding;gene_synonym=yqjH;locus_tag=AC56_RS06620;old_locus_tag=AC56_3446
NZ_JJLS01000253.1	Protein Homology	CDS	23533	24297	.	-	0	ID=cds-WP_001066494.1;Parent=gene-AC56_RS06620;Dbxref=GenBank:WP_001066494.1;Name=WP_001066494.1;gbkey=CDS;gene=nfeF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417541.1;locus_tag=AC56_RS06620;product=NADPH-dependent ferric chelate reductase NfeF;protein_id=WP_001066494.1;transl_table=11
NZ_JJLS01000253.1	RefSeq	gene	24585	25208	.	+	.	ID=gene-AC56_RS06615;Name=nfeR;gbkey=Gene;gene=nfeR;gene_biotype=protein_coding;gene_synonym=yqjI;locus_tag=AC56_RS06615;old_locus_tag=AC56_3447
NZ_JJLS01000253.1	Protein Homology	CDS	24585	25208	.	+	0	ID=cds-WP_000018003.1;Parent=gene-AC56_RS06615;Dbxref=GenBank:WP_000018003.1;Name=WP_000018003.1;gbkey=CDS;gene=nfeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417542.1;locus_tag=AC56_RS06615;product=DNA-binding transcriptional regulator NfeR;protein_id=WP_000018003.1;transl_table=11
NZ_JJLS01000253.1	RefSeq	gene	25362	26882	.	-	.	ID=gene-AC56_RS06610;Name=aer;gbkey=Gene;gene=aer;gene_biotype=protein_coding;locus_tag=AC56_RS06610;old_locus_tag=AC56_3448
NZ_JJLS01000253.1	Protein Homology	CDS	25362	26882	.	-	0	ID=cds-WP_032278954.1;Parent=gene-AC56_RS06610;Dbxref=GenBank:WP_032278954.1;Name=WP_032278954.1;gbkey=CDS;gene=aer;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417543.1;locus_tag=AC56_RS06610;product=aerotaxis sensor receptor Aer;protein_id=WP_032278954.1;transl_table=11
NZ_JJLS01000253.1	RefSeq	gene	27300	28679	.	+	.	ID=gene-AC56_RS06605;Name=ygjG;gbkey=Gene;gene=ygjG;gene_biotype=protein_coding;locus_tag=AC56_RS06605;old_locus_tag=AC56_3450
NZ_JJLS01000253.1	Protein Homology	CDS	27300	28679	.	+	0	ID=cds-WP_032152130.1;Parent=gene-AC56_RS06605;Dbxref=GenBank:WP_032152130.1;Name=WP_032152130.1;Ontology_term=GO:0009447,GO:0030170,GO:0033094;gbkey=CDS;gene=ygjG;go_function=pyridoxal phosphate binding|0030170||IEA,putrescine--2-oxoglutarate transaminase activity|0033094||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417544.5;locus_tag=AC56_RS06605;product=putrescine aminotransferase;protein_id=WP_032152130.1;transl_table=11
NZ_JJLS01000253.1	RefSeq	gene	28721	29053	.	-	.	ID=gene-AC56_RS06600;Name=ygjH;gbkey=Gene;gene=ygjH;gene_biotype=protein_coding;locus_tag=AC56_RS06600;old_locus_tag=AC56_3451
NZ_JJLS01000253.1	Protein Homology	CDS	28721	29053	.	-	0	ID=cds-WP_000450588.1;Parent=gene-AC56_RS06600;Dbxref=GenBank:WP_000450588.1;Name=WP_000450588.1;gbkey=CDS;gene=ygjH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311983.1;locus_tag=AC56_RS06600;product=tRNA-binding protein;protein_id=WP_000450588.1;transl_table=11
NZ_JJLS01000253.1	RefSeq	gene	29272	30255	.	+	.	ID=gene-AC56_RS06595;Name=ebgR;gbkey=Gene;gene=ebgR;gene_biotype=protein_coding;locus_tag=AC56_RS06595;old_locus_tag=AC56_3453
NZ_JJLS01000253.1	Protein Homology	CDS	29272	30255	.	+	0	ID=cds-WP_000212477.1;Parent=gene-AC56_RS06595;Dbxref=GenBank:WP_000212477.1;Name=WP_000212477.1;gbkey=CDS;gene=ebgR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417546.1;locus_tag=AC56_RS06595;product=transcriptional regulator EbgR;protein_id=WP_000212477.1;transl_table=11
NZ_JJLS01000253.1	RefSeq	gene	30439	33531	.	+	.	ID=gene-AC56_RS06590;Name=ebgA;gbkey=Gene;gene=ebgA;gene_biotype=protein_coding;locus_tag=AC56_RS06590;old_locus_tag=AC56_3454
NZ_JJLS01000253.1	Protein Homology	CDS	30439	33531	.	+	0	ID=cds-WP_032278955.1;Parent=gene-AC56_RS06590;Dbxref=GenBank:WP_032278955.1;Name=WP_032278955.1;Ontology_term=GO:0004565;gbkey=CDS;gene=ebgA;go_function=beta-galactosidase activity|0004565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311985.2;locus_tag=AC56_RS06590;product=beta-galactosidase subunit alpha;protein_id=WP_032278955.1;transl_table=11
NZ_JJLS01000253.1	RefSeq	gene	33528	33977	.	+	.	ID=gene-AC56_RS06585;Name=ebgC;gbkey=Gene;gene=ebgC;gene_biotype=protein_coding;locus_tag=AC56_RS06585;old_locus_tag=AC56_3455
NZ_JJLS01000253.1	Protein Homology	CDS	33528	33977	.	+	0	ID=cds-WP_001219954.1;Parent=gene-AC56_RS06585;Dbxref=GenBank:WP_001219954.1;Name=WP_001219954.1;gbkey=CDS;gene=ebgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417548.1;locus_tag=AC56_RS06585;product=beta-galactosidase subunit beta;protein_id=WP_001219954.1;transl_table=11
NZ_JJLS01000253.1	RefSeq	gene	34040	35125	.	+	.	ID=gene-AC56_RS0126940;Name=ygjJ;gbkey=Gene;gene=ygjJ;gene_biotype=protein_coding;locus_tag=AC56_RS0126940;old_locus_tag=AC56_3456
NZ_JJLS01000253.1	Protein Homology	CDS	34040	35125	.	+	0	ID=cds-WP_050439705.1;Parent=gene-AC56_RS0126940;Dbxref=GenBank:WP_050439705.1;Name=WP_050439705.1;gbkey=CDS;gene=ygjJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417550.1;locus_tag=AC56_RS0126940;product=protein YgjJ;protein_id=WP_050439705.1;transl_table=11
NZ_JJLS01000253.1	RefSeq	pseudogene	35142	37493	.	+	.	ID=gene-AC56_RS0126945;Name=ygjK;gbkey=Gene;gene=ygjK;gene_biotype=pseudogene;locus_tag=AC56_RS0126945;old_locus_tag=AC56_3457;pseudo=true
NZ_JJLS01000253.1	Protein Homology	CDS	35142	37493	.	+	0	ID=cds-AC56_RS0126945;Parent=gene-AC56_RS0126945;Note=internal stop;Ontology_term=GO:0005991,GO:0004555;gbkey=CDS;gene=ygjK;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417551.1;locus_tag=AC56_RS0126945;product=alpha-glucosidase;pseudo=true;transl_table=11
NZ_JJLS01000253.1	RefSeq	gene	37919	39937	.	+	.	ID=gene-AC56_RS06580;Name=fadH;gbkey=Gene;gene=fadH;gene_biotype=protein_coding;locus_tag=AC56_RS06580;old_locus_tag=AC56_3460
NZ_JJLS01000253.1	Protein Homology	CDS	37919	39937	.	+	0	ID=cds-WP_000121433.1;Parent=gene-AC56_RS06580;Dbxref=GenBank:WP_000121433.1;Name=WP_000121433.1;gbkey=CDS;gene=fadH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417552.1;locus_tag=AC56_RS06580;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WP_000121433.1;transl_table=11
NZ_JJLS01000253.1	RefSeq	gene	39982	40398	.	-	.	ID=gene-AC56_RS06575;Name=higA;gbkey=Gene;gene=higA;gene_biotype=protein_coding;locus_tag=AC56_RS06575;old_locus_tag=AC56_3461
NZ_JJLS01000253.1	Protein Homology	CDS	39982	40398	.	-	0	ID=cds-WP_000560266.1;Parent=gene-AC56_RS06575;Dbxref=GenBank:WP_000560266.1;Name=WP_000560266.1;gbkey=CDS;gene=higA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417553.1;locus_tag=AC56_RS06575;product=type II toxin-antitoxin system antitoxin HigA;protein_id=WP_000560266.1;transl_table=11
NZ_JJLS01000253.1	RefSeq	gene	40395	40709	.	-	.	ID=gene-AC56_RS06570;Name=higB;gbkey=Gene;gene=higB;gene_biotype=protein_coding;locus_tag=AC56_RS06570;old_locus_tag=AC56_3462
NZ_JJLS01000253.1	Protein Homology	CDS	40395	40709	.	-	0	ID=cds-WP_000550189.1;Parent=gene-AC56_RS06570;Dbxref=GenBank:WP_000550189.1;Name=WP_000550189.1;gbkey=CDS;gene=higB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311992.1;locus_tag=AC56_RS06570;product=type II toxin-antitoxin system toxin HigB;protein_id=WP_000550189.1;transl_table=11
NZ_JJLS01000253.1	RefSeq	gene	40993	42129	.	-	.	ID=gene-AC56_RS06565;Name=rlmG;gbkey=Gene;gene=rlmG;gene_biotype=protein_coding;locus_tag=AC56_RS06565;old_locus_tag=AC56_3463
NZ_JJLS01000253.1	Protein Homology	CDS	40993	42129	.	-	0	ID=cds-WP_000018695.1;Parent=gene-AC56_RS06565;Dbxref=GenBank:WP_000018695.1;Name=WP_000018695.1;Ontology_term=GO:0031167,GO:0003676,GO:0008990;gbkey=CDS;gene=rlmG;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417555.4;locus_tag=AC56_RS06565;product=23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG;protein_id=WP_000018695.1;transl_table=11
NZ_JJLS01000253.1	RefSeq	gene	42214	42717	.	+	.	ID=gene-AC56_RS06560;Name=ygjP;gbkey=Gene;gene=ygjP;gene_biotype=protein_coding;locus_tag=AC56_RS06560;old_locus_tag=AC56_3464
NZ_JJLS01000253.1	Protein Homology	CDS	42214	42717	.	+	0	ID=cds-WP_001300832.1;Parent=gene-AC56_RS06560;Dbxref=GenBank:WP_001300832.1;Name=WP_001300832.1;Ontology_term=GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;gene=ygjP;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417556.2;locus_tag=AC56_RS06560;product=M48 metallopeptidase family protein;protein_id=WP_001300832.1;transl_table=11
NZ_JJLS01000253.1	RefSeq	gene	42794	43486	.	+	.	ID=gene-AC56_RS06555;Name=ygjQ;gbkey=Gene;gene=ygjQ;gene_biotype=protein_coding;locus_tag=AC56_RS06555;old_locus_tag=AC56_3465
NZ_JJLS01000253.1	Protein Homology	CDS	42794	43486	.	+	0	ID=cds-WP_000942548.1;Parent=gene-AC56_RS06555;Dbxref=GenBank:WP_000942548.1;Name=WP_000942548.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ygjQ;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417557.1;locus_tag=AC56_RS06555;product=SanA/YdcF family protein;protein_id=WP_000942548.1;transl_table=11
NZ_JJLS01000253.1	RefSeq	gene	43565	44551	.	+	.	ID=gene-AC56_RS06550;Name=ygjR;gbkey=Gene;gene=ygjR;gene_biotype=protein_coding;locus_tag=AC56_RS06550;old_locus_tag=AC56_3466
NZ_JJLS01000253.1	Protein Homology	CDS	43565	44551	.	+	0	ID=cds-WP_032278963.1;Parent=gene-AC56_RS06550;Dbxref=GenBank:WP_032278963.1;Name=WP_032278963.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;gene=ygjR;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417558.2;locus_tag=AC56_RS06550;product=Gfo/Idh/MocA family protein;protein_id=WP_032278963.1;transl_table=11
NZ_JJLS01000253.1	RefSeq	gene	44834	45799	.	+	.	ID=gene-AC56_RS06545;Name=alx;gbkey=Gene;gene=alx;gene_biotype=protein_coding;locus_tag=AC56_RS06545;old_locus_tag=AC56_3467
NZ_JJLS01000253.1	Protein Homology	CDS	44834	45799	.	+	0	ID=cds-WP_001098805.1;Parent=gene-AC56_RS06545;Dbxref=GenBank:WP_001098805.1;Name=WP_001098805.1;gbkey=CDS;gene=alx;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001098790.1;locus_tag=AC56_RS06545;product=TerC family membrane protein Alx;protein_id=WP_001098805.1;transl_table=11
NZ_JJLS01000253.1	RefSeq	gene	46415	47659	.	+	.	ID=gene-AC56_RS06540;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=AC56_RS06540;old_locus_tag=AC56_3468
NZ_JJLS01000253.1	Protein Homology	CDS	46415	47659	.	+	0	ID=cds-WP_032278956.1;Parent=gene-AC56_RS06540;Dbxref=GenBank:WP_032278956.1;Name=WP_032278956.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311998.1;locus_tag=AC56_RS06540;product=serine/threonine transporter SstT;protein_id=WP_032278956.1;transl_table=11
NZ_JJLS01000253.1	RefSeq	gene	47664	48215	.	-	.	ID=gene-AC56_RS06535;Name=ygjV;gbkey=Gene;gene=ygjV;gene_biotype=protein_coding;locus_tag=AC56_RS06535;old_locus_tag=AC56_3469
NZ_JJLS01000253.1	Protein Homology	CDS	47664	48215	.	-	0	ID=cds-WP_001513270.1;Parent=gene-AC56_RS06535;Dbxref=GenBank:WP_001513270.1;Name=WP_001513270.1;gbkey=CDS;gene=ygjV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311999.1;locus_tag=AC56_RS06535;product=YgjV family protein;protein_id=WP_001513270.1;transl_table=11
NZ_JJLS01000253.1	RefSeq	gene	48298	49785	.	-	.	ID=gene-AC56_RS06530;Name=uxaA;gbkey=Gene;gene=uxaA;gene_biotype=protein_coding;locus_tag=AC56_RS06530;old_locus_tag=AC56_3470
NZ_JJLS01000253.1	Protein Homology	CDS	48298	49785	.	-	0	ID=cds-WP_001199390.1;Parent=gene-AC56_RS06530;Dbxref=GenBank:WP_001199390.1;Name=WP_001199390.1;gbkey=CDS;gene=uxaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199350.1;locus_tag=AC56_RS06530;product=altronate dehydratase;protein_id=WP_001199390.1;transl_table=11
NZ_JJLS01000253.1	RefSeq	gene	49800	51212	.	-	.	ID=gene-AC56_RS06525;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=AC56_RS06525;old_locus_tag=AC56_3471
NZ_JJLS01000253.1	Protein Homology	CDS	49800	51212	.	-	0	ID=cds-WP_000187442.1;Parent=gene-AC56_RS06525;Dbxref=GenBank:WP_000187442.1;Name=WP_000187442.1;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077755.1;locus_tag=AC56_RS06525;product=glucuronate isomerase;protein_id=WP_000187442.1;transl_table=11
NZ_JJLS01000253.1	RefSeq	gene	51695	52993	.	+	.	ID=gene-AC56_RS06520;Name=exuT;gbkey=Gene;gene=exuT;gene_biotype=protein_coding;locus_tag=AC56_RS06520;old_locus_tag=AC56_3472
NZ_JJLS01000253.1	Protein Homology	CDS	51695	52993	.	+	0	ID=cds-WP_001226463.1;Parent=gene-AC56_RS06520;Dbxref=GenBank:WP_001226463.1;Name=WP_001226463.1;gbkey=CDS;gene=exuT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708898.2;locus_tag=AC56_RS06520;product=hexuronate transporter ExuT;protein_id=WP_001226463.1;transl_table=11
NZ_JJLS01000253.1	RefSeq	pseudogene	53167	53723	.	+	.	ID=gene-AC56_RS06515;Name=AC56_RS06515;end_range=53723,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS06515;old_locus_tag=AC56_3473;partial=true;pseudo=true
NZ_JJLS01000253.1	Protein Homology	CDS	53167	53723	.	+	0	ID=cds-AC56_RS06515;Parent=gene-AC56_RS06515;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;end_range=53723,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS06515;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000254.1 1 29363
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000254.1	RefSeq	region	1	29363	.	+	.	ID=NZ_JJLS01000254.1:1..29363;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000254.1	RefSeq	pseudogene	1	530	.	+	.	ID=gene-AC56_RS06510;Name=AC56_RS06510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS06510;old_locus_tag=AC56_3474;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000254.1	Protein Homology	CDS	1	530	.	+	0	ID=cds-AC56_RS06510;Parent=gene-AC56_RS06510;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS06510;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000254.1	RefSeq	gene	541	1617	.	-	.	ID=gene-AC56_RS06505;Name=AC56_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS06505;old_locus_tag=AC56_3475
NZ_JJLS01000254.1	Protein Homology	CDS	541	1617	.	-	0	ID=cds-WP_032278964.1;Parent=gene-AC56_RS06505;Dbxref=GenBank:WP_032278964.1;Name=WP_032278964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001352146.1;locus_tag=AC56_RS06505;product=CfaE/CblD family pilus tip adhesin;protein_id=WP_032278964.1;transl_table=11
NZ_JJLS01000254.1	RefSeq	gene	1614	4298	.	-	.	ID=gene-AC56_RS06500;Name=AC56_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS06500;old_locus_tag=AC56_3476
NZ_JJLS01000254.1	Protein Homology	CDS	1614	4298	.	-	0	ID=cds-WP_000358646.1;Parent=gene-AC56_RS06500;Dbxref=GenBank:WP_000358646.1;Name=WP_000358646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666746.1;locus_tag=AC56_RS06500;product=TcfC E-set like domain-containing protein;protein_id=WP_000358646.1;transl_table=11
NZ_JJLS01000254.1	RefSeq	gene	4389	4889	.	-	.	ID=gene-AC56_RS06495;Name=AC56_RS06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS06495;old_locus_tag=AC56_3477
NZ_JJLS01000254.1	Protein Homology	CDS	4389	4889	.	-	0	ID=cds-WP_000755097.1;Parent=gene-AC56_RS06495;Dbxref=GenBank:WP_000755097.1;Name=WP_000755097.1;Ontology_term=GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000755097.1;locus_tag=AC56_RS06495;product=CS1 type fimbrial major subunit;protein_id=WP_000755097.1;transl_table=11
NZ_JJLS01000254.1	RefSeq	gene	4919	5635	.	-	.	ID=gene-AC56_RS06490;Name=AC56_RS06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS06490;old_locus_tag=AC56_3478
NZ_JJLS01000254.1	Protein Homology	CDS	4919	5635	.	-	0	ID=cds-WP_000225857.1;Parent=gene-AC56_RS06490;Dbxref=GenBank:WP_000225857.1;Name=WP_000225857.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000225871.1;locus_tag=AC56_RS06490;product=fimbria/pilus periplasmic chaperone;protein_id=WP_000225857.1;transl_table=11
NZ_JJLS01000254.1	RefSeq	gene	5931	6707	.	+	.	ID=gene-AC56_RS06485;Name=exuR;gbkey=Gene;gene=exuR;gene_biotype=protein_coding;locus_tag=AC56_RS06485;old_locus_tag=AC56_3479
NZ_JJLS01000254.1	Protein Homology	CDS	5931	6707	.	+	0	ID=cds-WP_000406493.1;Parent=gene-AC56_RS06485;Dbxref=GenBank:WP_000406493.1;Name=WP_000406493.1;gbkey=CDS;gene=exuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708902.1;locus_tag=AC56_RS06485;product=transcriptional regulator ExuR;protein_id=WP_000406493.1;transl_table=11
NZ_JJLS01000254.1	RefSeq	gene	6947	7030	.	+	.	ID=gene-AC56_RS33390;Name=yqiM;gbkey=Gene;gene=yqiM;gene_biotype=protein_coding;locus_tag=AC56_RS33390
NZ_JJLS01000254.1	Protein Homology	CDS	6947	7030	.	+	0	ID=cds-WP_211180508.1;Parent=gene-AC56_RS33390;Dbxref=GenBank:WP_211180508.1;Name=WP_211180508.1;gbkey=CDS;gene=yqiM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051200.1;locus_tag=AC56_RS33390;product=protein YqiM;protein_id=WP_211180508.1;transl_table=11
NZ_JJLS01000254.1	RefSeq	gene	7052	7714	.	+	.	ID=gene-AC56_RS06480;Name=yqjA;gbkey=Gene;gene=yqjA;gene_biotype=protein_coding;locus_tag=AC56_RS06480;old_locus_tag=AC56_3481
NZ_JJLS01000254.1	Protein Homology	CDS	7052	7714	.	+	0	ID=cds-WP_000422149.1;Parent=gene-AC56_RS06480;Dbxref=GenBank:WP_000422149.1;Name=WP_000422149.1;gbkey=CDS;gene=yqjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312004.1;locus_tag=AC56_RS06480;product=DedA family general envelope maintenance protein YqjA;protein_id=WP_000422149.1;transl_table=11
NZ_JJLS01000254.1	RefSeq	gene	7718	8101	.	+	.	ID=gene-AC56_RS06475;Name=mzrA;gbkey=Gene;gene=mzrA;gene_biotype=protein_coding;locus_tag=AC56_RS06475;old_locus_tag=AC56_3482
NZ_JJLS01000254.1	Protein Homology	CDS	7718	8101	.	+	0	ID=cds-WP_001166761.1;Parent=gene-AC56_RS06475;Dbxref=GenBank:WP_001166761.1;Name=WP_001166761.1;gbkey=CDS;gene=mzrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312005.1;locus_tag=AC56_RS06475;product=EnvZ/OmpR regulon moderator MzrA;protein_id=WP_001166761.1;transl_table=11
NZ_JJLS01000254.1	RefSeq	gene	8248	8616	.	+	.	ID=gene-AC56_RS06470;Name=yqjC;gbkey=Gene;gene=yqjC;gene_biotype=protein_coding;locus_tag=AC56_RS06470;old_locus_tag=AC56_3483
NZ_JJLS01000254.1	Protein Homology	CDS	8248	8616	.	+	0	ID=cds-WP_001295543.1;Parent=gene-AC56_RS06470;Dbxref=GenBank:WP_001295543.1;Name=WP_001295543.1;gbkey=CDS;gene=yqjC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417568.2;locus_tag=AC56_RS06470;product=DUF1090 family protein YqjC;protein_id=WP_001295543.1;transl_table=11
NZ_JJLS01000254.1	RefSeq	gene	8654	8959	.	+	.	ID=gene-AC56_RS06465;Name=yqjD;gbkey=Gene;gene=yqjD;gene_biotype=protein_coding;locus_tag=AC56_RS06465;old_locus_tag=AC56_3484
NZ_JJLS01000254.1	Protein Homology	CDS	8654	8959	.	+	0	ID=cds-WP_000031415.1;Parent=gene-AC56_RS06465;Dbxref=GenBank:WP_000031415.1;Name=WP_000031415.1;Ontology_term=GO:0043022,GO:0005886;gbkey=CDS;gene=yqjD;go_component=plasma membrane|0005886||IEA;go_function=ribosome binding|0043022||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312007.1;locus_tag=AC56_RS06465;product=DUF883 family protein;protein_id=WP_000031415.1;transl_table=11
NZ_JJLS01000254.1	RefSeq	gene	8962	9366	.	+	.	ID=gene-AC56_RS06460;Name=yqjE;gbkey=Gene;gene=yqjE;gene_biotype=protein_coding;locus_tag=AC56_RS06460;old_locus_tag=AC56_3485
NZ_JJLS01000254.1	Protein Homology	CDS	8962	9366	.	+	0	ID=cds-WP_000785722.1;Parent=gene-AC56_RS06460;Dbxref=GenBank:WP_000785722.1;Name=WP_000785722.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yqjE;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312008.1;locus_tag=AC56_RS06460;product=phage holin family protein;protein_id=WP_000785722.1;transl_table=11
NZ_JJLS01000254.1	RefSeq	gene	9356	9655	.	+	.	ID=gene-AC56_RS06455;Name=yqjK;gbkey=Gene;gene=yqjK;gene_biotype=protein_coding;locus_tag=AC56_RS06455;old_locus_tag=AC56_3486
NZ_JJLS01000254.1	Protein Homology	CDS	9356	9655	.	+	0	ID=cds-WP_000096086.1;Parent=gene-AC56_RS06455;Dbxref=GenBank:WP_000096086.1;Name=WP_000096086.1;gbkey=CDS;gene=yqjK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312009.1;locus_tag=AC56_RS06455;product=YqjK-like family protein;protein_id=WP_000096086.1;transl_table=11
NZ_JJLS01000254.1	RefSeq	gene	9841	10233	.	+	.	ID=gene-AC56_RS06450;Name=yqjF;gbkey=Gene;gene=yqjF;gene_biotype=protein_coding;locus_tag=AC56_RS06450;old_locus_tag=AC56_3487
NZ_JJLS01000254.1	Protein Homology	CDS	9841	10233	.	+	0	ID=cds-WP_000732240.1;Parent=gene-AC56_RS06450;Dbxref=GenBank:WP_000732240.1;Name=WP_000732240.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yqjF;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503138.1;locus_tag=AC56_RS06450;product=DoxX family protein;protein_id=WP_000732240.1;transl_table=11
NZ_JJLS01000254.1	RefSeq	gene	10303	11289	.	+	.	ID=gene-AC56_RS06445;Name=yqjG;gbkey=Gene;gene=yqjG;gene_biotype=protein_coding;locus_tag=AC56_RS06445;old_locus_tag=AC56_3488
NZ_JJLS01000254.1	Protein Homology	CDS	10303	11289	.	+	0	ID=cds-WP_000531205.1;Parent=gene-AC56_RS06445;Dbxref=GenBank:WP_000531205.1;Name=WP_000531205.1;gbkey=CDS;gene=yqjG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708909.2;locus_tag=AC56_RS06445;product=glutathionyl-hydroquinone reductase YqjG;protein_id=WP_000531205.1;transl_table=11
NZ_JJLS01000254.1	RefSeq	gene	11582	11947	.	+	.	ID=gene-AC56_RS06440;Name=yhaH;gbkey=Gene;gene=yhaH;gene_biotype=protein_coding;locus_tag=AC56_RS06440;old_locus_tag=AC56_3489
NZ_JJLS01000254.1	Protein Homology	CDS	11582	11947	.	+	0	ID=cds-WP_000384145.1;Parent=gene-AC56_RS06440;Dbxref=GenBank:WP_000384145.1;Name=WP_000384145.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yhaH;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312012.1;locus_tag=AC56_RS06440;product=DUF805 domain-containing protein;protein_id=WP_000384145.1;transl_table=11
NZ_JJLS01000254.1	RefSeq	pseudogene	12189	12545	.	+	.	ID=gene-AC56_RS0126965;Name=yhaI;gbkey=Gene;gene=yhaI;gene_biotype=pseudogene;locus_tag=AC56_RS0126965;old_locus_tag=AC56_3490;pseudo=true
NZ_JJLS01000254.1	Protein Homology	CDS	12189	12545	.	+	0	ID=cds-AC56_RS0126965;Parent=gene-AC56_RS0126965;Note=internal stop;Ontology_term=GO:0016020;gbkey=CDS;gene=yhaI;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312013.1;locus_tag=AC56_RS0126965;product=DUF805 domain-containing protein;pseudo=true;transl_table=11
NZ_JJLS01000254.1	RefSeq	gene	12596	13492	.	-	.	ID=gene-AC56_RS06435;Name=yhaJ;gbkey=Gene;gene=yhaJ;gene_biotype=protein_coding;locus_tag=AC56_RS06435;old_locus_tag=AC56_3492
NZ_JJLS01000254.1	Protein Homology	CDS	12596	13492	.	-	0	ID=cds-WP_001041009.1;Parent=gene-AC56_RS06435;Dbxref=GenBank:WP_001041009.1;Name=WP_001041009.1;gbkey=CDS;gene=yhaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312014.1;locus_tag=AC56_RS06435;product=DNA-binding transcriptional regulator YhaJ;protein_id=WP_001041009.1;transl_table=11
NZ_JJLS01000254.1	RefSeq	gene	13597	14298	.	+	.	ID=gene-AC56_RS06430;Name=yhaK;gbkey=Gene;gene=yhaK;gene_biotype=protein_coding;locus_tag=AC56_RS06430;old_locus_tag=AC56_3493
NZ_JJLS01000254.1	Protein Homology	CDS	13597	14298	.	+	0	ID=cds-WP_000633576.1;Parent=gene-AC56_RS06430;Dbxref=GenBank:WP_000633576.1;Name=WP_000633576.1;gbkey=CDS;gene=yhaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417577.1;locus_tag=AC56_RS06430;product=pirin family protein;protein_id=WP_000633576.1;transl_table=11
NZ_JJLS01000254.1	RefSeq	gene	14321	14485	.	+	.	ID=gene-AC56_RS06425;Name=yhaL;gbkey=Gene;gene=yhaL;gene_biotype=protein_coding;locus_tag=AC56_RS06425;old_locus_tag=AC56_3494
NZ_JJLS01000254.1	Protein Homology	CDS	14321	14485	.	+	0	ID=cds-WP_001300823.1;Parent=gene-AC56_RS06425;Dbxref=GenBank:WP_001300823.1;Name=WP_001300823.1;gbkey=CDS;gene=yhaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417578.2;locus_tag=AC56_RS06425;product=protein YhaL;protein_id=WP_001300823.1;transl_table=11
NZ_JJLS01000254.1	RefSeq	gene	14546	15856	.	-	.	ID=gene-AC56_RS06420;Name=cyuA;gbkey=Gene;gene=cyuA;gene_biotype=protein_coding;locus_tag=AC56_RS06420;old_locus_tag=AC56_3495
NZ_JJLS01000254.1	Protein Homology	CDS	14546	15856	.	-	0	ID=cds-WP_000460514.1;Parent=gene-AC56_RS06420;Dbxref=GenBank:WP_000460514.1;Name=WP_000460514.1;gbkey=CDS;gene=cyuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312017.1;locus_tag=AC56_RS06420;product=cysteine desulfidase;protein_id=WP_000460514.1;transl_table=11
NZ_JJLS01000254.1	RefSeq	gene	15884	17215	.	-	.	ID=gene-AC56_RS06415;Name=cyuP;gbkey=Gene;gene=cyuP;gene_biotype=protein_coding;locus_tag=AC56_RS06415;old_locus_tag=AC56_3496
NZ_JJLS01000254.1	Protein Homology	CDS	15884	17215	.	-	0	ID=cds-WP_000401598.1;Parent=gene-AC56_RS06415;Dbxref=GenBank:WP_000401598.1;Name=WP_000401598.1;gbkey=CDS;gene=cyuP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026203.3;locus_tag=AC56_RS06415;product=amino acid permease;protein_id=WP_000401598.1;transl_table=11
NZ_JJLS01000254.1	RefSeq	gene	17490	18854	.	-	.	ID=gene-AC56_RS06410;Name=tdcG;gbkey=Gene;gene=tdcG;gene_biotype=protein_coding;locus_tag=AC56_RS06410;old_locus_tag=AC56_3497
NZ_JJLS01000254.1	Protein Homology	CDS	17490	18854	.	-	0	ID=cds-WP_000622126.1;Parent=gene-AC56_RS06410;Dbxref=GenBank:WP_000622126.1;Name=WP_000622126.1;gbkey=CDS;gene=tdcG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026204.1;locus_tag=AC56_RS06410;product=L-serine ammonia-lyase;protein_id=WP_000622126.1;transl_table=11
NZ_JJLS01000254.1	RefSeq	gene	18926	19315	.	-	.	ID=gene-AC56_RS06405;Name=tdcF;gbkey=Gene;gene=tdcF;gene_biotype=protein_coding;locus_tag=AC56_RS06405;old_locus_tag=AC56_3498
NZ_JJLS01000254.1	Protein Homology	CDS	18926	19315	.	-	0	ID=cds-WP_000719990.1;Parent=gene-AC56_RS06405;Dbxref=GenBank:WP_000719990.1;Name=WP_000719990.1;gbkey=CDS;gene=tdcF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312020.2;locus_tag=AC56_RS06405;product=enamine/imine deaminase;protein_id=WP_000719990.1;transl_table=11
NZ_JJLS01000254.1	RefSeq	gene	19329	21623	.	-	.	ID=gene-AC56_RS06400;Name=tdcE;gbkey=Gene;gene=tdcE;gene_biotype=protein_coding;locus_tag=AC56_RS06400;old_locus_tag=AC56_3499
NZ_JJLS01000254.1	Protein Homology	CDS	19329	21623	.	-	0	ID=cds-WP_003987236.1;Parent=gene-AC56_RS06400;Dbxref=GenBank:WP_003987236.1;Name=WP_003987236.1;gbkey=CDS;gene=tdcE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026205.1;locus_tag=AC56_RS06400;product=2-ketobutyrate formate-lyase/pyruvate formate-lyase;protein_id=WP_003987236.1;transl_table=11
NZ_JJLS01000254.1	RefSeq	gene	21657	22865	.	-	.	ID=gene-AC56_RS06395;Name=tdcD;gbkey=Gene;gene=tdcD;gene_biotype=protein_coding;locus_tag=AC56_RS06395;old_locus_tag=AC56_3500
NZ_JJLS01000254.1	Protein Homology	CDS	21657	22865	.	-	0	ID=cds-WP_032282858.1;Parent=gene-AC56_RS06395;Dbxref=GenBank:WP_032282858.1;Name=WP_032282858.1;Ontology_term=GO:0006082,GO:0016310,GO:0016301;gbkey=CDS;gene=tdcD;go_function=kinase activity|0016301||IEA;go_process=organic acid metabolic process|0006082||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312022.2;locus_tag=AC56_RS06395;product=propionate kinase;protein_id=WP_032282858.1;transl_table=11
NZ_JJLS01000254.1	RefSeq	gene	22891	24222	.	-	.	ID=gene-AC56_RS06390;Name=tdcC;gbkey=Gene;gene=tdcC;gene_biotype=protein_coding;locus_tag=AC56_RS06390;old_locus_tag=AC56_3501
NZ_JJLS01000254.1	Protein Homology	CDS	22891	24222	.	-	0	ID=cds-WP_000107721.1;Parent=gene-AC56_RS06390;Dbxref=GenBank:WP_000107721.1;Name=WP_000107721.1;gbkey=CDS;gene=tdcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708920.1;locus_tag=AC56_RS06390;product=threonine/serine transporter TdcC;protein_id=WP_000107721.1;transl_table=11
NZ_JJLS01000254.1	RefSeq	gene	24244	25233	.	-	.	ID=gene-AC56_RS06385;Name=tdcB;gbkey=Gene;gene=tdcB;gene_biotype=protein_coding;locus_tag=AC56_RS06385;old_locus_tag=AC56_3502
NZ_JJLS01000254.1	Protein Homology	CDS	24244	25233	.	-	0	ID=cds-WP_000548347.1;Parent=gene-AC56_RS06385;Dbxref=GenBank:WP_000548347.1;Name=WP_000548347.1;Ontology_term=GO:0006567,GO:0004794,GO:0030170;gbkey=CDS;gene=tdcB;go_function=threonine deaminase activity|0004794||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312024.1;locus_tag=AC56_RS06385;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;protein_id=WP_000548347.1;transl_table=11
NZ_JJLS01000254.1	RefSeq	gene	25332	26270	.	-	.	ID=gene-AC56_RS06380;Name=tdcA;gbkey=Gene;gene=tdcA;gene_biotype=protein_coding;locus_tag=AC56_RS06380;old_locus_tag=AC56_3503
NZ_JJLS01000254.1	Protein Homology	CDS	25332	26270	.	-	0	ID=cds-WP_000104211.1;Parent=gene-AC56_RS06380;Dbxref=GenBank:WP_000104211.1;Name=WP_000104211.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=tdcA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312025.1;locus_tag=AC56_RS06380;product=transcriptional regulator TdcA;protein_id=WP_000104211.1;transl_table=11
NZ_JJLS01000254.1	RefSeq	gene	26585	26803	.	+	.	ID=gene-AC56_RS33060;Name=tdcR;gbkey=Gene;gene=tdcR;gene_biotype=protein_coding;locus_tag=AC56_RS33060
NZ_JJLS01000254.1	Protein Homology	CDS	26585	26803	.	+	0	ID=cds-WP_001301311.1;Parent=gene-AC56_RS33060;Dbxref=GenBank:WP_001301311.1;Name=WP_001301311.1;gbkey=CDS;gene=tdcR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417589.4;locus_tag=AC56_RS33060;product=transcriptional activator TdcR;protein_id=WP_001301311.1;transl_table=11
NZ_JJLS01000254.1	RefSeq	gene	27059	27598	.	+	.	ID=gene-AC56_RS06370;Name=yhaB;gbkey=Gene;gene=yhaB;gene_biotype=protein_coding;locus_tag=AC56_RS06370;old_locus_tag=AC56_3506
NZ_JJLS01000254.1	Protein Homology	CDS	27059	27598	.	+	0	ID=cds-WP_000675733.1;Parent=gene-AC56_RS06370;Dbxref=GenBank:WP_000675733.1;Name=WP_000675733.1;gbkey=CDS;gene=yhaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417590.2;locus_tag=AC56_RS06370;product=protein YhaB;protein_id=WP_000675733.1;transl_table=11
NZ_JJLS01000254.1	RefSeq	pseudogene	27620	28808	.	+	.	ID=gene-AC56_RS06365;Name=yhaC;gbkey=Gene;gene=yhaC;gene_biotype=pseudogene;locus_tag=AC56_RS06365;old_locus_tag=AC56_3507;pseudo=true
NZ_JJLS01000254.1	Protein Homology	CDS	27620	28808	.	+	0	ID=cds-AC56_RS06365;Parent=gene-AC56_RS06365;Note=frameshifted;gbkey=CDS;gene=yhaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417591.1;locus_tag=AC56_RS06365;product=YhaC family protein;pseudo=true;transl_table=11
NZ_JJLS01000254.1	RefSeq	gene	28907	29363	.	+	.	ID=gene-AC56_RS06360;Name=AC56_RS06360;end_range=29363,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS06360;old_locus_tag=AC56_3508;partial=true
NZ_JJLS01000254.1	Protein Homology	CDS	28907	29363	.	+	0	ID=cds-WP_032278556.1;Parent=gene-AC56_RS06360;Dbxref=GenBank:WP_032278556.1;Name=WP_032278556.1;Ontology_term=GO:0004803;end_range=29363,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS06360;partial=true;product=IS5 family transposase;protein_id=WP_032278556.1;transl_table=11
##sequence-region NZ_JJLS01000255.1 1 6573
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000255.1	RefSeq	region	1	6573	.	+	.	ID=NZ_JJLS01000255.1:1..6573;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000255.1	RefSeq	pseudogene	1	512	.	+	.	ID=gene-AC56_RS06355;Name=AC56_RS06355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS06355;old_locus_tag=AC56_3509;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000255.1	Protein Homology	CDS	1	512	.	+	2	ID=cds-AC56_RS06355;Parent=gene-AC56_RS06355;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS06355;partial=true;product=IS5-like element IS903 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000255.1	RefSeq	gene	1019	1395	.	-	.	ID=gene-AC56_RS27825;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=AC56_RS27825
NZ_JJLS01000255.1	cmsearch	RNase_P_RNA	1019	1395	.	-	.	ID=rna-AC56_RS27825;Parent=gene-AC56_RS27825;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS27825;product=RNase P RNA component class A
NZ_JJLS01000255.1	cmsearch	exon	1019	1395	.	-	.	ID=exon-AC56_RS27825-1;Parent=rna-AC56_RS27825;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS27825;product=RNase P RNA component class A
NZ_JJLS01000255.1	RefSeq	gene	1428	2573	.	-	.	ID=gene-AC56_RS06350;Name=garK;gbkey=Gene;gene=garK;gene_biotype=protein_coding;locus_tag=AC56_RS06350;old_locus_tag=AC56_3510
NZ_JJLS01000255.1	Protein Homology	CDS	1428	2573	.	-	0	ID=cds-WP_001300387.1;Parent=gene-AC56_RS06350;Dbxref=GenBank:WP_001300387.1;Name=WP_001300387.1;Ontology_term=GO:0031388,GO:0008887;gbkey=CDS;gene=garK;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417593.4;locus_tag=AC56_RS06350;product=glycerate 2-kinase;protein_id=WP_001300387.1;transl_table=11
NZ_JJLS01000255.1	RefSeq	gene	2670	3560	.	-	.	ID=gene-AC56_RS06345;Name=garR;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=AC56_RS06345;old_locus_tag=AC56_3511
NZ_JJLS01000255.1	Protein Homology	CDS	2670	3560	.	-	0	ID=cds-WP_001303675.1;Parent=gene-AC56_RS06345;Dbxref=GenBank:WP_001303675.1;Name=WP_001303675.1;Ontology_term=GO:0046487,GO:0008679;gbkey=CDS;gene=garR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312030.2;locus_tag=AC56_RS06345;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_001303675.1;transl_table=11
NZ_JJLS01000255.1	RefSeq	gene	3590	4360	.	-	.	ID=gene-AC56_RS06340;Name=garL;gbkey=Gene;gene=garL;gene_biotype=protein_coding;locus_tag=AC56_RS06340;old_locus_tag=AC56_3512
NZ_JJLS01000255.1	Protein Homology	CDS	3590	4360	.	-	0	ID=cds-WP_001058209.1;Parent=gene-AC56_RS06340;Dbxref=GenBank:WP_001058209.1;Name=WP_001058209.1;Ontology_term=GO:0019394,GO:0008672;gbkey=CDS;gene=garL;go_function=2-dehydro-3-deoxyglucarate aldolase activity|0008672||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417595.1;locus_tag=AC56_RS06340;product=2-dehydro-3-deoxyglucarate aldolase;protein_id=WP_001058209.1;transl_table=11
NZ_JJLS01000255.1	RefSeq	gene	4376	5710	.	-	.	ID=gene-AC56_RS06335;Name=garP;gbkey=Gene;gene=garP;gene_biotype=protein_coding;locus_tag=AC56_RS06335;old_locus_tag=AC56_3513
NZ_JJLS01000255.1	Protein Homology	CDS	4376	5710	.	-	0	ID=cds-WP_000599636.1;Parent=gene-AC56_RS06335;Dbxref=GenBank:WP_000599636.1;Name=WP_000599636.1;gbkey=CDS;gene=garP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312032.1;locus_tag=AC56_RS06335;product=galactarate/glucarate/glycerate transporter GarP;protein_id=WP_000599636.1;transl_table=11
NZ_JJLS01000255.1	RefSeq	pseudogene	6085	6180	.	+	.	ID=gene-AC56_RS33395;Name=AC56_RS33395;end_range=6180,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33395;partial=true;pseudo=true
NZ_JJLS01000255.1	Protein Homology	CDS	6085	6180	.	+	0	ID=cds-AC56_RS33395;Parent=gene-AC56_RS33395;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=6180,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312033.1;locus_tag=AC56_RS33395;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_JJLS01000255.1	RefSeq	gene	6213	6573	.	+	.	ID=gene-AC56_RS06330;Name=AC56_RS06330;end_range=6573,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS06330;old_locus_tag=AC56_3516;partial=true
NZ_JJLS01000255.1	Protein Homology	CDS	6213	6573	.	+	0	ID=cds-WP_131142095.1-2;Parent=gene-AC56_RS06330;Dbxref=GenBank:WP_131142095.1;Name=WP_131142095.1;end_range=6573,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS06330;partial=true;product=transposase;protein_id=WP_131142095.1;transl_table=11
##sequence-region NZ_JJLS01000256.1 1 76641
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000256.1	RefSeq	region	1	76641	.	+	.	ID=NZ_JJLS01000256.1:1..76641;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000256.1	RefSeq	pseudogene	1	530	.	+	.	ID=gene-AC56_RS06325;Name=AC56_RS06325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS06325;old_locus_tag=AC56_3517;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000256.1	Protein Homology	CDS	1	530	.	+	2	ID=cds-AC56_RS06325;Parent=gene-AC56_RS06325;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS06325;partial=true;product=IS5-like element IS903 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000256.1	RefSeq	pseudogene	589	771	.	+	.	ID=gene-AC56_RS0126975;Name=AC56_RS0126975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0126975;partial=true;pseudo=true;start_range=.,589
NZ_JJLS01000256.1	Protein Homology	CDS	589	771	.	+	0	ID=cds-AC56_RS0126975;Parent=gene-AC56_RS0126975;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417614.1;locus_tag=AC56_RS0126975;partial=true;product=fimbrial protein;pseudo=true;start_range=.,589;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	814	1674	.	-	.	ID=gene-AC56_RS06320;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=AC56_RS06320;old_locus_tag=AC56_3518
NZ_JJLS01000256.1	Protein Homology	CDS	814	1674	.	-	0	ID=cds-WP_000809262.1;Parent=gene-AC56_RS06320;Dbxref=GenBank:WP_000809262.1;Name=WP_000809262.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rsmI;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312054.1;locus_tag=AC56_RS06320;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_000809262.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	1739	3775	.	+	.	ID=gene-AC56_RS06315;Name=lpoA;gbkey=Gene;gene=lpoA;gene_biotype=protein_coding;locus_tag=AC56_RS06315;old_locus_tag=AC56_3519
NZ_JJLS01000256.1	Protein Homology	CDS	1739	3775	.	+	0	ID=cds-WP_000249103.1;Parent=gene-AC56_RS06315;Dbxref=GenBank:WP_000249103.1;Name=WP_000249103.1;gbkey=CDS;gene=lpoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417616.1;locus_tag=AC56_RS06315;product=penicillin-binding protein activator LpoA;protein_id=WP_000249103.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	3733	4128	.	+	.	ID=gene-AC56_RS06310;Name=yraN;gbkey=Gene;gene=yraN;gene_biotype=protein_coding;locus_tag=AC56_RS06310;old_locus_tag=AC56_3520
NZ_JJLS01000256.1	Protein Homology	CDS	3733	4128	.	+	0	ID=cds-WP_032219244.1;Parent=gene-AC56_RS06310;Dbxref=GenBank:WP_032219244.1;Name=WP_032219244.1;gbkey=CDS;gene=yraN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417617.1;locus_tag=AC56_RS06310;product=YraN family protein;protein_id=WP_032219244.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	4148	4738	.	+	.	ID=gene-AC56_RS06305;Name=diaA;gbkey=Gene;gene=diaA;gene_biotype=protein_coding;locus_tag=AC56_RS06305;old_locus_tag=AC56_3521
NZ_JJLS01000256.1	Protein Homology	CDS	4148	4738	.	+	0	ID=cds-WP_001158034.1;Parent=gene-AC56_RS06305;Dbxref=GenBank:WP_001158034.1;Name=WP_001158034.1;gbkey=CDS;gene=diaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312057.1;locus_tag=AC56_RS06305;product=DnaA initiator-associating protein DiaA;protein_id=WP_001158034.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	4748	5323	.	+	.	ID=gene-AC56_RS06300;Name=dolP;gbkey=Gene;gene=dolP;gene_biotype=protein_coding;locus_tag=AC56_RS06300;old_locus_tag=AC56_3522
NZ_JJLS01000256.1	Protein Homology	CDS	4748	5323	.	+	0	ID=cds-WP_000646033.1;Parent=gene-AC56_RS06300;Dbxref=GenBank:WP_000646033.1;Name=WP_000646033.1;Ontology_term=GO:0006970;gbkey=CDS;gene=dolP;go_process=response to osmotic stress|0006970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312058.1;locus_tag=AC56_RS06300;product=division/outer membrane stress-associated lipid-binding lipoprotein;protein_id=WP_000646033.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	5437	6477	.	-	.	ID=gene-AC56_RS06295;Name=yraQ;gbkey=Gene;gene=yraQ;gene_biotype=protein_coding;locus_tag=AC56_RS06295;old_locus_tag=AC56_3523
NZ_JJLS01000256.1	Protein Homology	CDS	5437	6477	.	-	0	ID=cds-WP_032277665.1;Parent=gene-AC56_RS06295;Dbxref=GenBank:WP_032277665.1;Name=WP_032277665.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yraQ;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417620.1;locus_tag=AC56_RS06295;product=permease;protein_id=WP_032277665.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	6550	7185	.	-	.	ID=gene-AC56_RS06290;Name=yraR;gbkey=Gene;gene=yraR;gene_biotype=protein_coding;locus_tag=AC56_RS06290;old_locus_tag=AC56_3524
NZ_JJLS01000256.1	Protein Homology	CDS	6550	7185	.	-	0	ID=cds-WP_001300423.1;Parent=gene-AC56_RS06290;Dbxref=GenBank:WP_001300423.1;Name=WP_001300423.1;gbkey=CDS;gene=yraR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417621.2;locus_tag=AC56_RS06290;product=NAD(P)H-binding protein;protein_id=WP_001300423.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	7313	7831	.	+	.	ID=gene-AC56_RS06285;Name=yhbO;gbkey=Gene;gene=yhbO;gene_biotype=protein_coding;locus_tag=AC56_RS06285;old_locus_tag=AC56_3525
NZ_JJLS01000256.1	Protein Homology	CDS	7313	7831	.	+	0	ID=cds-WP_032277664.1;Parent=gene-AC56_RS06285;Dbxref=GenBank:WP_032277664.1;Name=WP_032277664.1;gbkey=CDS;gene=yhbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417622.2;locus_tag=AC56_RS06285;product=protein/nucleic acid deglycase;protein_id=WP_032277664.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	7811	8254	.	-	.	ID=gene-AC56_RS06280;Name=yhbP;gbkey=Gene;gene=yhbP;gene_biotype=protein_coding;locus_tag=AC56_RS06280;old_locus_tag=AC56_3526
NZ_JJLS01000256.1	Protein Homology	CDS	7811	8254	.	-	0	ID=cds-WP_000449030.1;Parent=gene-AC56_RS06280;Dbxref=GenBank:WP_000449030.1;Name=WP_000449030.1;gbkey=CDS;gene=yhbP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417623.1;locus_tag=AC56_RS06280;product=YhbP family protein;protein_id=WP_000449030.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	8305	8607	.	+	.	ID=gene-AC56_RS06275;Name=yhbQ;gbkey=Gene;gene=yhbQ;gene_biotype=protein_coding;locus_tag=AC56_RS06275;old_locus_tag=AC56_3527
NZ_JJLS01000256.1	Protein Homology	CDS	8305	8607	.	+	0	ID=cds-WP_000189314.1;Parent=gene-AC56_RS06275;Dbxref=GenBank:WP_000189314.1;Name=WP_000189314.1;gbkey=CDS;gene=yhbQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708956.2;locus_tag=AC56_RS06275;product=DNA damage response exodeoxyribonuclease YhbQ;protein_id=WP_000189314.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	8594	9097	.	-	.	ID=gene-AC56_RS06270;Name=yhbS;gbkey=Gene;gene=yhbS;gene_biotype=protein_coding;locus_tag=AC56_RS06270;old_locus_tag=AC56_3528
NZ_JJLS01000256.1	Protein Homology	CDS	8594	9097	.	-	0	ID=cds-WP_000908554.1;Parent=gene-AC56_RS06270;Dbxref=GenBank:WP_000908554.1;Name=WP_000908554.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;gene=yhbS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312064.1;locus_tag=AC56_RS06270;product=GNAT family N-acetyltransferase;protein_id=WP_000908554.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	9091	9615	.	-	.	ID=gene-AC56_RS06265;Name=ubiT;gbkey=Gene;gene=ubiT;gene_biotype=protein_coding;locus_tag=AC56_RS06265;old_locus_tag=AC56_3529
NZ_JJLS01000256.1	Protein Homology	CDS	9091	9615	.	-	0	ID=cds-WP_001295552.1;Parent=gene-AC56_RS06265;Dbxref=GenBank:WP_001295552.1;Name=WP_001295552.1;Ontology_term=GO:0006744,GO:0110142;gbkey=CDS;gene=ubiT;go_component=ubiquinone biosynthesis complex|0110142||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312065.1;locus_tag=AC56_RS06265;product=ubiquinone anaerobic biosynthesis accessory factor UbiT;protein_id=WP_001295552.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	9824	10819	.	+	.	ID=gene-AC56_RS06260;Name=ubiU;gbkey=Gene;gene=ubiU;gene_biotype=protein_coding;locus_tag=AC56_RS06260;old_locus_tag=AC56_3531
NZ_JJLS01000256.1	Protein Homology	CDS	9824	10819	.	+	0	ID=cds-WP_000421305.1;Parent=gene-AC56_RS06260;Dbxref=GenBank:WP_000421305.1;Name=WP_000421305.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiU;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=AC56_RS06260;product=ubiquinone anaerobic biosynthesis protein UbiU;protein_id=WP_000421305.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	10828	11706	.	+	.	ID=gene-AC56_RS06255;Name=ubiV;gbkey=Gene;gene=ubiV;gene_biotype=protein_coding;locus_tag=AC56_RS06255;old_locus_tag=AC56_3532
NZ_JJLS01000256.1	Protein Homology	CDS	10828	11706	.	+	0	ID=cds-WP_032277663.1;Parent=gene-AC56_RS06255;Dbxref=GenBank:WP_032277663.1;Name=WP_032277663.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiV;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417628.2;locus_tag=AC56_RS06255;product=U32 family peptidase;protein_id=WP_032277663.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	11787	12794	.	+	.	ID=gene-AC56_RS06250;Name=yhbW;gbkey=Gene;gene=yhbW;gene_biotype=protein_coding;locus_tag=AC56_RS06250;old_locus_tag=AC56_3533
NZ_JJLS01000256.1	Protein Homology	CDS	11787	12794	.	+	0	ID=cds-WP_000130380.1;Parent=gene-AC56_RS06250;Dbxref=GenBank:WP_000130380.1;Name=WP_000130380.1;Ontology_term=GO:0016705;gbkey=CDS;gene=yhbW;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417629.1;locus_tag=AC56_RS06250;product=luciferase-like monooxygenase;protein_id=WP_000130380.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	12912	14156	.	-	.	ID=gene-AC56_RS06245;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=AC56_RS06245;old_locus_tag=AC56_3534
NZ_JJLS01000256.1	Protein Homology	CDS	12912	14156	.	-	0	ID=cds-WP_000224351.1;Parent=gene-AC56_RS06245;Dbxref=GenBank:WP_000224351.1;Name=WP_000224351.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=mtr;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417630.1;locus_tag=AC56_RS06245;product=tryptophan permease;protein_id=WP_000224351.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	14310	16199	.	-	.	ID=gene-AC56_RS06235;Name=deaD;gbkey=Gene;gene=deaD;gene_biotype=protein_coding;locus_tag=AC56_RS06235;old_locus_tag=AC56_3536
NZ_JJLS01000256.1	Protein Homology	CDS	14310	16199	.	-	0	ID=cds-WP_001295553.1;Parent=gene-AC56_RS06235;Dbxref=GenBank:WP_001295553.1;Name=WP_001295553.1;gbkey=CDS;gene=deaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417631.2;locus_tag=AC56_RS06235;product=ATP-dependent RNA helicase DeaD;protein_id=WP_001295553.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	16192	16272	.	-	.	ID=gene-AC56_RS31595;Name=yrbN;gbkey=Gene;gene=yrbN;gene_biotype=protein_coding;locus_tag=AC56_RS31595
NZ_JJLS01000256.1	Protein Homology	CDS	16192	16272	.	-	0	ID=cds-WP_010723222.1;Parent=gene-AC56_RS31595;Dbxref=GenBank:WP_010723222.1;Name=WP_010723222.1;gbkey=CDS;gene=yrbN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791258.1;locus_tag=AC56_RS31595;product=protein YrbN;protein_id=WP_010723222.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	16379	17263	.	-	.	ID=gene-AC56_RS06230;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=AC56_RS06230;old_locus_tag=AC56_3537
NZ_JJLS01000256.1	Protein Homology	CDS	16379	17263	.	-	0	ID=cds-WP_000802080.1;Parent=gene-AC56_RS06230;Dbxref=GenBank:WP_000802080.1;Name=WP_000802080.1;Ontology_term=GO:0005515;gbkey=CDS;gene=nlpI;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802045.1;locus_tag=AC56_RS06230;product=lipoprotein NlpI;protein_id=WP_000802080.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	17372	19507	.	-	.	ID=gene-AC56_RS06225;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=AC56_RS06225;old_locus_tag=AC56_3538
NZ_JJLS01000256.1	Protein Homology	CDS	17372	19507	.	-	0	ID=cds-WP_001295554.1;Parent=gene-AC56_RS06225;Dbxref=GenBank:WP_001295554.1;Name=WP_001295554.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417633.4;locus_tag=AC56_RS06225;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_001295554.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	19754	20023	.	-	.	ID=gene-AC56_RS06220;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=AC56_RS06220;old_locus_tag=AC56_3539
NZ_JJLS01000256.1	Protein Homology	CDS	19754	20023	.	-	0	ID=cds-WP_000059466.1;Parent=gene-AC56_RS06220;Dbxref=GenBank:WP_000059466.1;Name=WP_000059466.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=AC56_RS06220;product=30S ribosomal protein S15;protein_id=WP_000059466.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	20172	21116	.	-	.	ID=gene-AC56_RS06215;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=AC56_RS06215;old_locus_tag=AC56_3540
NZ_JJLS01000256.1	Protein Homology	CDS	20172	21116	.	-	0	ID=cds-WP_000089698.1;Parent=gene-AC56_RS06215;Dbxref=GenBank:WP_000089698.1;Name=WP_000089698.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312074.1;locus_tag=AC56_RS06215;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_000089698.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	21116	21517	.	-	.	ID=gene-AC56_RS06210;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=AC56_RS06210;old_locus_tag=AC56_3541
NZ_JJLS01000256.1	Protein Homology	CDS	21116	21517	.	-	0	ID=cds-WP_001040205.1;Parent=gene-AC56_RS06210;Dbxref=GenBank:WP_001040205.1;Name=WP_001040205.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001712908.1;locus_tag=AC56_RS06210;product=30S ribosome-binding factor RbfA;protein_id=WP_001040205.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	21681	24353	.	-	.	ID=gene-AC56_RS06205;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=AC56_RS06205;old_locus_tag=AC56_3542
NZ_JJLS01000256.1	Protein Homology	CDS	21681	24353	.	-	0	ID=cds-WP_000133044.1;Parent=gene-AC56_RS06205;Dbxref=GenBank:WP_000133044.1;Name=WP_000133044.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312076.1;locus_tag=AC56_RS06205;product=translation initiation factor IF-2;protein_id=WP_000133044.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	24378	25865	.	-	.	ID=gene-AC56_RS06200;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=AC56_RS06200;old_locus_tag=AC56_3543
NZ_JJLS01000256.1	Protein Homology	CDS	24378	25865	.	-	0	ID=cds-WP_001031057.1;Parent=gene-AC56_RS06200;Dbxref=GenBank:WP_001031057.1;Name=WP_001031057.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1;locus_tag=AC56_RS06200;product=transcription termination factor NusA;protein_id=WP_001031057.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	25893	26345	.	-	.	ID=gene-AC56_RS06195;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=AC56_RS06195;old_locus_tag=AC56_3544
NZ_JJLS01000256.1	Protein Homology	CDS	25893	26345	.	-	0	ID=cds-WP_001300397.1;Parent=gene-AC56_RS06195;Dbxref=GenBank:WP_001300397.1;Name=WP_001300397.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1;locus_tag=AC56_RS06195;product=ribosome maturation factor RimP;protein_id=WP_001300397.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	26552	26628	.	-	.	ID=gene-AC56_RS06190;Name=AC56_RS06190;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS06190;old_locus_tag=AC56_3545
NZ_JJLS01000256.1	tRNAscan-SE	tRNA	26552	26628	.	-	.	ID=rna-AC56_RS06190;Parent=gene-AC56_RS06190;anticodon=(pos:complement(26592..26594));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS06190;product=tRNA-Met
NZ_JJLS01000256.1	tRNAscan-SE	exon	26552	26628	.	-	.	ID=exon-AC56_RS06190-1;Parent=rna-AC56_RS06190;anticodon=(pos:complement(26592..26594));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS06190;product=tRNA-Met
NZ_JJLS01000256.1	RefSeq	gene	26976	28319	.	+	.	ID=gene-AC56_RS06185;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=AC56_RS06185;old_locus_tag=AC56_3547
NZ_JJLS01000256.1	Protein Homology	CDS	26976	28319	.	+	0	ID=cds-WP_000207680.1;Parent=gene-AC56_RS06185;Dbxref=GenBank:WP_000207680.1;Name=WP_000207680.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524,GO:0042803;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417640.1;locus_tag=AC56_RS06185;product=argininosuccinate synthase;protein_id=WP_000207680.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	28327	29952	.	-	.	ID=gene-AC56_RS06180;Name=yhbX;gbkey=Gene;gene=yhbX;gene_biotype=protein_coding;locus_tag=AC56_RS06180;old_locus_tag=AC56_3548
NZ_JJLS01000256.1	Protein Homology	CDS	28327	29952	.	-	0	ID=cds-WP_074015627.1;Parent=gene-AC56_RS06180;Dbxref=GenBank:WP_074015627.1;Name=WP_074015627.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yhbX;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417641.4;locus_tag=AC56_RS06180;product=phosphoethanolamine transferase;protein_id=WP_074015627.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	30411	30497	.	-	.	ID=gene-AC56_RS06175;Name=AC56_RS06175;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS06175;old_locus_tag=AC56_3549
NZ_JJLS01000256.1	tRNAscan-SE	tRNA	30411	30497	.	-	.	ID=rna-AC56_RS06175;Parent=gene-AC56_RS06175;anticodon=(pos:complement(30461..30463));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS06175;product=tRNA-Leu
NZ_JJLS01000256.1	tRNAscan-SE	exon	30411	30497	.	-	.	ID=exon-AC56_RS06175-1;Parent=rna-AC56_RS06175;anticodon=(pos:complement(30461..30463));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS06175;product=tRNA-Leu
NZ_JJLS01000256.1	RefSeq	gene	30512	30844	.	-	.	ID=gene-AC56_RS06170;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=AC56_RS06170;old_locus_tag=AC56_3550
NZ_JJLS01000256.1	Protein Homology	CDS	30512	30844	.	-	0	ID=cds-WP_001297427.1;Parent=gene-AC56_RS06170;Dbxref=GenBank:WP_001297427.1;Name=WP_001297427.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312081.1;locus_tag=AC56_RS06170;product=preprotein translocase subunit SecG;protein_id=WP_001297427.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	31072	32409	.	-	.	ID=gene-AC56_RS06165;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=AC56_RS06165;old_locus_tag=AC56_3551
NZ_JJLS01000256.1	Protein Homology	CDS	31072	32409	.	-	0	ID=cds-WP_032278972.1;Parent=gene-AC56_RS06165;Dbxref=GenBank:WP_032278972.1;Name=WP_032278972.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular phosphotransferase activity|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417643.1;locus_tag=AC56_RS06165;product=phosphoglucosamine mutase;protein_id=WP_032278972.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	32402	33250	.	-	.	ID=gene-AC56_RS06160;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=AC56_RS06160;old_locus_tag=AC56_3552
NZ_JJLS01000256.1	Protein Homology	CDS	32402	33250	.	-	0	ID=cds-WP_000764731.1;Parent=gene-AC56_RS06160;Dbxref=GenBank:WP_000764731.1;Name=WP_000764731.1;Ontology_term=GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312083.2;locus_tag=AC56_RS06160;product=dihydropteroate synthase;protein_id=WP_000764731.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	33340	35274	.	-	.	ID=gene-AC56_RS06155;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=AC56_RS06155;old_locus_tag=AC56_3553
NZ_JJLS01000256.1	Protein Homology	CDS	33340	35274	.	-	0	ID=cds-WP_001107467.1;Parent=gene-AC56_RS06155;Dbxref=GenBank:WP_001107467.1;Name=WP_001107467.1;Ontology_term=GO:0006508,GO:0004176,GO:0004222;gbkey=CDS;gene=ftsH;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833437.1;locus_tag=AC56_RS06155;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_001107467.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	35374	36003	.	-	.	ID=gene-AC56_RS06150;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=AC56_RS06150;old_locus_tag=AC56_3554
NZ_JJLS01000256.1	Protein Homology	CDS	35374	36003	.	-	0	ID=cds-WP_000145975.1;Parent=gene-AC56_RS06150;Dbxref=GenBank:WP_000145975.1;Name=WP_000145975.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312085.1;locus_tag=AC56_RS06150;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WP_000145975.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	36129	36422	.	+	.	ID=gene-AC56_RS06145;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=AC56_RS06145;old_locus_tag=AC56_3555
NZ_JJLS01000256.1	Protein Homology	CDS	36129	36422	.	+	0	ID=cds-WP_001054420.1;Parent=gene-AC56_RS06145;Dbxref=GenBank:WP_001054420.1;Name=WP_001054420.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1;locus_tag=AC56_RS06145;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_001054420.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	36578	37054	.	-	.	ID=gene-AC56_RS06140;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=AC56_RS06140;old_locus_tag=AC56_3556
NZ_JJLS01000256.1	Protein Homology	CDS	36578	37054	.	-	0	ID=cds-WP_001148001.1;Parent=gene-AC56_RS06140;Dbxref=GenBank:WP_001148001.1;Name=WP_001148001.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1;locus_tag=AC56_RS06140;product=transcription elongation factor GreA;protein_id=WP_001148001.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	37302	38735	.	+	.	ID=gene-AC56_RS06135;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=AC56_RS06135;old_locus_tag=AC56_3557
NZ_JJLS01000256.1	Protein Homology	CDS	37302	38735	.	+	0	ID=cds-WP_032278975.1;Parent=gene-AC56_RS06135;Dbxref=GenBank:WP_032278975.1;Name=WP_032278975.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;gene=dacB;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001212660.1;locus_tag=AC56_RS06135;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_032278975.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	38921	40093	.	-	.	ID=gene-AC56_RS06130;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=AC56_RS06130;old_locus_tag=AC56_3559
NZ_JJLS01000256.1	Protein Homology	CDS	38921	40093	.	-	0	ID=cds-WP_000673572.1;Parent=gene-AC56_RS06130;Dbxref=GenBank:WP_000673572.1;Name=WP_000673572.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=cgtA;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312089.1;locus_tag=AC56_RS06130;product=Obg family GTPase CgtA;protein_id=WP_000673572.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	40109	41074	.	-	.	ID=gene-AC56_RS06125;Name=yhbE;gbkey=Gene;gene=yhbE;gene_biotype=protein_coding;locus_tag=AC56_RS06125;old_locus_tag=AC56_3560
NZ_JJLS01000256.1	Protein Homology	CDS	40109	41074	.	-	0	ID=cds-WP_000813037.1;Parent=gene-AC56_RS06125;Dbxref=GenBank:WP_000813037.1;Name=WP_000813037.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yhbE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135318.1;locus_tag=AC56_RS06125;product=DMT family transporter;protein_id=WP_000813037.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	41201	41458	.	-	.	ID=gene-AC56_RS06120;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=AC56_RS06120;old_locus_tag=AC56_3561
NZ_JJLS01000256.1	Protein Homology	CDS	41201	41458	.	-	0	ID=cds-WP_000940595.1;Parent=gene-AC56_RS06120;Dbxref=GenBank:WP_000940595.1;Name=WP_000940595.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1;locus_tag=AC56_RS06120;product=50S ribosomal protein L27;protein_id=WP_000940595.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	41479	41790	.	-	.	ID=gene-AC56_RS06115;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=AC56_RS06115;old_locus_tag=AC56_3562
NZ_JJLS01000256.1	Protein Homology	CDS	41479	41790	.	-	0	ID=cds-WP_000271401.1;Parent=gene-AC56_RS06115;Dbxref=GenBank:WP_000271401.1;Name=WP_000271401.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=AC56_RS06115;product=50S ribosomal protein L21;protein_id=WP_000271401.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	42048	43019	.	+	.	ID=gene-AC56_RS06110;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=AC56_RS06110;old_locus_tag=AC56_3563
NZ_JJLS01000256.1	Protein Homology	CDS	42048	43019	.	+	0	ID=cds-WP_001047336.1;Parent=gene-AC56_RS06110;Dbxref=GenBank:WP_001047336.1;Name=WP_001047336.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispB;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417654.1;locus_tag=AC56_RS06110;product=octaprenyl diphosphate synthase;protein_id=WP_001047336.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	43248	43526	.	+	.	ID=gene-AC56_RS06105;Name=sfsB;gbkey=Gene;gene=sfsB;gene_biotype=protein_coding;locus_tag=AC56_RS06105;old_locus_tag=AC56_3564
NZ_JJLS01000256.1	Protein Homology	CDS	43248	43526	.	+	0	ID=cds-WP_000445413.1;Parent=gene-AC56_RS06105;Dbxref=GenBank:WP_000445413.1;Name=WP_000445413.1;gbkey=CDS;gene=sfsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417655.1;locus_tag=AC56_RS06105;product=DNA-binding transcriptional regulator SfsB;protein_id=WP_000445413.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	43574	44833	.	-	.	ID=gene-AC56_RS06100;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=AC56_RS06100;old_locus_tag=AC56_3565
NZ_JJLS01000256.1	Protein Homology	CDS	43574	44833	.	-	0	ID=cds-WP_000357259.1;Parent=gene-AC56_RS06100;Dbxref=GenBank:WP_000357259.1;Name=WP_000357259.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417656.1;locus_tag=AC56_RS06100;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_000357259.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	44888	45142	.	-	.	ID=gene-AC56_RS06095;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=protein_coding;locus_tag=AC56_RS06095;old_locus_tag=AC56_3566
NZ_JJLS01000256.1	Protein Homology	CDS	44888	45142	.	-	0	ID=cds-WP_000429656.1;Parent=gene-AC56_RS06095;Dbxref=GenBank:WP_000429656.1;Name=WP_000429656.1;gbkey=CDS;gene=ibaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417657.2;locus_tag=AC56_RS06095;product=BolA family iron metabolism protein IbaG;protein_id=WP_000429656.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	45302	45595	.	-	.	ID=gene-AC56_RS06090;Name=mlaB;gbkey=Gene;gene=mlaB;gene_biotype=protein_coding;locus_tag=AC56_RS06090;old_locus_tag=AC56_3567
NZ_JJLS01000256.1	Protein Homology	CDS	45302	45595	.	-	0	ID=cds-WP_000004488.1;Parent=gene-AC56_RS06090;Dbxref=GenBank:WP_000004488.1;Name=WP_000004488.1;gbkey=CDS;gene=mlaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312097.2;locus_tag=AC56_RS06090;product=lipid asymmetry maintenance protein MlaB;protein_id=WP_000004488.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	45595	46230	.	-	.	ID=gene-AC56_RS06085;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=AC56_RS06085;old_locus_tag=AC56_3568
NZ_JJLS01000256.1	Protein Homology	CDS	45595	46230	.	-	0	ID=cds-WP_000476487.1;Parent=gene-AC56_RS06085;Dbxref=GenBank:WP_000476487.1;Name=WP_000476487.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417659.1;locus_tag=AC56_RS06085;product=phospholipid-binding protein MlaC;protein_id=WP_000476487.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	46249	46800	.	-	.	ID=gene-AC56_RS06080;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=AC56_RS06080;old_locus_tag=AC56_3569
NZ_JJLS01000256.1	Protein Homology	CDS	46249	46800	.	-	0	ID=cds-WP_001296448.1;Parent=gene-AC56_RS06080;Dbxref=GenBank:WP_001296448.1;Name=WP_001296448.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312099.1;locus_tag=AC56_RS06080;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_001296448.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	46805	47587	.	-	.	ID=gene-AC56_RS06075;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=AC56_RS06075;old_locus_tag=AC56_3570
NZ_JJLS01000256.1	Protein Homology	CDS	46805	47587	.	-	0	ID=cds-WP_000925795.1;Parent=gene-AC56_RS06075;Dbxref=GenBank:WP_000925795.1;Name=WP_000925795.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071945.1;locus_tag=AC56_RS06075;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WP_000925795.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	47595	48404	.	-	.	ID=gene-AC56_RS06070;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;locus_tag=AC56_RS06070;old_locus_tag=AC56_3571
NZ_JJLS01000256.1	Protein Homology	CDS	47595	48404	.	-	0	ID=cds-WP_032278977.1;Parent=gene-AC56_RS06070;Dbxref=GenBank:WP_032278977.1;Name=WP_032278977.1;Ontology_term=GO:0005524;gbkey=CDS;gene=mlaF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312101.1;locus_tag=AC56_RS06070;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=WP_032278977.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	48614	49591	.	+	.	ID=gene-AC56_RS06065;Name=yrbG;gbkey=Gene;gene=yrbG;gene_biotype=protein_coding;locus_tag=AC56_RS06065;old_locus_tag=AC56_3572
NZ_JJLS01000256.1	Protein Homology	CDS	48614	49591	.	+	0	ID=cds-WP_000922901.1;Parent=gene-AC56_RS06065;Dbxref=GenBank:WP_000922901.1;Name=WP_000922901.1;gbkey=CDS;gene=yrbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417663.1;locus_tag=AC56_RS06065;product=calcium/sodium antiporter;protein_id=WP_000922901.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	49605	50591	.	+	.	ID=gene-AC56_RS06060;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=AC56_RS06060;old_locus_tag=AC56_3573
NZ_JJLS01000256.1	Protein Homology	CDS	49605	50591	.	+	0	ID=cds-WP_001295557.1;Parent=gene-AC56_RS06060;Dbxref=GenBank:WP_001295557.1;Name=WP_001295557.1;Ontology_term=GO:1901135,GO:0016853,GO:0097367;gbkey=CDS;gene=kdsD;go_function=isomerase activity|0016853||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417664.1;locus_tag=AC56_RS06060;product=arabinose-5-phosphate isomerase KdsD;protein_id=WP_001295557.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	50612	51178	.	+	.	ID=gene-AC56_RS06055;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=AC56_RS06055;old_locus_tag=AC56_3574
NZ_JJLS01000256.1	Protein Homology	CDS	50612	51178	.	+	0	ID=cds-WP_000030016.1;Parent=gene-AC56_RS06055;Dbxref=GenBank:WP_000030016.1;Name=WP_000030016.1;Ontology_term=GO:0016788;gbkey=CDS;gene=kdsC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708997.1;locus_tag=AC56_RS06055;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;protein_id=WP_000030016.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	51175	51750	.	+	.	ID=gene-AC56_RS06050;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=AC56_RS06050;old_locus_tag=AC56_3575
NZ_JJLS01000256.1	Protein Homology	CDS	51175	51750	.	+	0	ID=cds-WP_000030537.1;Parent=gene-AC56_RS06050;Dbxref=GenBank:WP_000030537.1;Name=WP_000030537.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312105.1;locus_tag=AC56_RS06050;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_000030537.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	51719	52276	.	+	.	ID=gene-AC56_RS06045;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=AC56_RS06045;old_locus_tag=AC56_3576
NZ_JJLS01000256.1	Protein Homology	CDS	51719	52276	.	+	0	ID=cds-WP_000669785.1;Parent=gene-AC56_RS06045;Dbxref=GenBank:WP_000669785.1;Name=WP_000669785.1;gbkey=CDS;gene=lptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312106.1;locus_tag=AC56_RS06045;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;protein_id=WP_000669785.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	52283	53008	.	+	.	ID=gene-AC56_RS06040;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=AC56_RS06040;old_locus_tag=AC56_3577
NZ_JJLS01000256.1	Protein Homology	CDS	52283	53008	.	+	0	ID=cds-WP_032278980.1;Parent=gene-AC56_RS06040;Dbxref=GenBank:WP_032278980.1;Name=WP_032278980.1;Ontology_term=GO:0055085,GO:0005524,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1;locus_tag=AC56_RS06040;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_032278980.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	53056	54489	.	+	.	ID=gene-AC56_RS06035;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=AC56_RS06035;old_locus_tag=AC56_3578
NZ_JJLS01000256.1	Protein Homology	CDS	53056	54489	.	+	0	ID=cds-WP_000809051.1;Parent=gene-AC56_RS06035;Dbxref=GenBank:WP_000809051.1;Name=WP_000809051.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoN;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312108.1;locus_tag=AC56_RS06035;product=RNA polymerase factor sigma-54;protein_id=WP_000809051.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	54512	54799	.	+	.	ID=gene-AC56_RS06030;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=AC56_RS06030;old_locus_tag=AC56_3579
NZ_JJLS01000256.1	Protein Homology	CDS	54512	54799	.	+	0	ID=cds-WP_001176599.1;Parent=gene-AC56_RS06030;Dbxref=GenBank:WP_001176599.1;Name=WP_001176599.1;Ontology_term=GO:0044238;gbkey=CDS;gene=hpf;go_process=primary metabolic process|0044238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312109.1;locus_tag=AC56_RS06030;product=ribosome hibernation promoting factor;protein_id=WP_001176599.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	54917	55408	.	+	.	ID=gene-AC56_RS06025;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=AC56_RS06025;old_locus_tag=AC56_3580
NZ_JJLS01000256.1	Protein Homology	CDS	54917	55408	.	+	0	ID=cds-WP_000183676.1;Parent=gene-AC56_RS06025;Dbxref=GenBank:WP_000183676.1;Name=WP_000183676.1;gbkey=CDS;gene=ptsN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417671.1;locus_tag=AC56_RS06025;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=WP_000183676.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	55454	56308	.	+	.	ID=gene-AC56_RS06020;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=AC56_RS06020;old_locus_tag=AC56_3581
NZ_JJLS01000256.1	Protein Homology	CDS	55454	56308	.	+	0	ID=cds-WP_000243741.1;Parent=gene-AC56_RS06020;Dbxref=GenBank:WP_000243741.1;Name=WP_000243741.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312111.1;locus_tag=AC56_RS06020;product=RNase adapter RapZ;protein_id=WP_000243741.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	56305	56577	.	+	.	ID=gene-AC56_RS06015;Name=npr;gbkey=Gene;gene=npr;gene_biotype=protein_coding;locus_tag=AC56_RS06015;old_locus_tag=AC56_3582
NZ_JJLS01000256.1	Protein Homology	CDS	56305	56577	.	+	0	ID=cds-WP_000216791.1;Parent=gene-AC56_RS06015;Dbxref=GenBank:WP_000216791.1;Name=WP_000216791.1;gbkey=CDS;gene=npr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1;locus_tag=AC56_RS06015;product=PTS phosphocarrier protein NPr;protein_id=WP_000216791.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	56791	57423	.	+	.	ID=gene-AC56_RS06010;Name=yrbL;gbkey=Gene;gene=yrbL;gene_biotype=protein_coding;locus_tag=AC56_RS06010;old_locus_tag=AC56_3583
NZ_JJLS01000256.1	Protein Homology	CDS	56791	57423	.	+	0	ID=cds-WP_000620405.1;Parent=gene-AC56_RS06010;Dbxref=GenBank:WP_000620405.1;Name=WP_000620405.1;gbkey=CDS;gene=yrbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417674.1;locus_tag=AC56_RS06010;product=PhoP regulatory network protein YrbL;protein_id=WP_000620405.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	57420	58148	.	-	.	ID=gene-AC56_RS06005;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=AC56_RS06005;old_locus_tag=AC56_3584
NZ_JJLS01000256.1	Protein Homology	CDS	57420	58148	.	-	0	ID=cds-WP_000047091.1;Parent=gene-AC56_RS06005;Dbxref=GenBank:WP_000047091.1;Name=WP_000047091.1;Ontology_term=GO:0009252,GO:0016763,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_function=pentosyltransferase activity|0016763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417675.1;locus_tag=AC56_RS06005;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_000047091.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	58145	58798	.	-	.	ID=gene-AC56_RS06000;Name=elbB;gbkey=Gene;gene=elbB;gene_biotype=protein_coding;locus_tag=AC56_RS06000;old_locus_tag=AC56_3585
NZ_JJLS01000256.1	Protein Homology	CDS	58145	58798	.	-	0	ID=cds-WP_001300411.1;Parent=gene-AC56_RS06000;Dbxref=GenBank:WP_001300411.1;Name=WP_001300411.1;gbkey=CDS;gene=elbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709007.2;locus_tag=AC56_RS06000;product=isoprenoid biosynthesis glyoxalase ElbB;protein_id=WP_001300411.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	59028	61364	.	-	.	ID=gene-AC56_RS05995;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=protein_coding;locus_tag=AC56_RS05995;old_locus_tag=AC56_3586
NZ_JJLS01000256.1	Protein Homology	CDS	59028	61364	.	-	0	ID=cds-WP_032278982.1;Parent=gene-AC56_RS05995;Dbxref=GenBank:WP_032278982.1;Name=WP_032278982.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=arcB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709008.1;locus_tag=AC56_RS05995;product=aerobic respiration two-component sensor histidine kinase ArcB;protein_id=WP_032278982.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	61460	62389	.	-	.	ID=gene-AC56_RS05990;Name=yhcC;gbkey=Gene;gene=yhcC;gene_biotype=protein_coding;locus_tag=AC56_RS05990;old_locus_tag=AC56_3587
NZ_JJLS01000256.1	Protein Homology	CDS	61460	62389	.	-	0	ID=cds-WP_001299745.1;Parent=gene-AC56_RS05990;Dbxref=GenBank:WP_001299745.1;Name=WP_001299745.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:0051536,GO:1904047;gbkey=CDS;gene=yhcC;go_function=iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312117.1;locus_tag=AC56_RS05990;product=TIGR01212 family radical SAM protein;protein_id=WP_001299745.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	63064	67524	.	+	.	ID=gene-AC56_RS05985;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=AC56_RS05985;old_locus_tag=AC56_3588
NZ_JJLS01000256.1	Protein Homology	CDS	63064	67524	.	+	0	ID=cds-WP_032278984.1;Parent=gene-AC56_RS05985;Dbxref=GenBank:WP_032278984.1;Name=WP_032278984.1;Ontology_term=GO:0006537,GO:0008152,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=AC56_RS05985;product=glutamate synthase large subunit;protein_id=WP_032278984.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	67537	68955	.	+	.	ID=gene-AC56_RS05980;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;locus_tag=AC56_RS05980;old_locus_tag=AC56_3589
NZ_JJLS01000256.1	Protein Homology	CDS	67537	68955	.	+	0	ID=cds-WP_032278983.1;Parent=gene-AC56_RS05980;Dbxref=GenBank:WP_032278983.1;Name=WP_032278983.1;gbkey=CDS;gene=gltD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1;locus_tag=AC56_RS05980;product=glutamate synthase subunit GltD;protein_id=WP_032278983.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	pseudogene	69139	69543	.	+	.	ID=gene-AC56_RS0126980;Name=AC56_RS0126980;end_range=69543,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0126980;partial=true;pseudo=true
NZ_JJLS01000256.1	Protein Homology	CDS	69139	69543	.	+	0	ID=cds-AC56_RS0126980;Parent=gene-AC56_RS0126980;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=69543,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417687.1;locus_tag=AC56_RS0126980;partial=true;product=DUF1016 N-terminal domain-containing protein;pseudo=true;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	69635	69898	.	+	.	ID=gene-AC56_RS0126985;Name=AC56_RS0126985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0126985
NZ_JJLS01000256.1	Protein Homology	CDS	69635	69898	.	+	0	ID=cds-WP_050439706.1;Parent=gene-AC56_RS0126985;Dbxref=GenBank:WP_050439706.1;Name=WP_050439706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079601.1;locus_tag=AC56_RS0126985;product=hypothetical protein;protein_id=WP_050439706.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	70016	70480	.	-	.	ID=gene-AC56_RS05975;Name=nanQ;gbkey=Gene;gene=nanQ;gene_biotype=protein_coding;locus_tag=AC56_RS05975;old_locus_tag=AC56_3593
NZ_JJLS01000256.1	Protein Homology	CDS	70016	70480	.	-	0	ID=cds-WP_000979881.1;Parent=gene-AC56_RS05975;Dbxref=GenBank:WP_000979881.1;Name=WP_000979881.1;Ontology_term=GO:0006974;gbkey=CDS;gene=nanQ;go_process=DNA damage response|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709014.1;locus_tag=AC56_RS05975;product=N-acetylneuraminate anomerase;protein_id=WP_000979881.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	70477	71352	.	-	.	ID=gene-AC56_RS05970;Name=nanK;gbkey=Gene;gene=nanK;gene_biotype=protein_coding;locus_tag=AC56_RS05970;old_locus_tag=AC56_3594
NZ_JJLS01000256.1	Protein Homology	CDS	70477	71352	.	-	0	ID=cds-WP_000209020.1;Parent=gene-AC56_RS05970;Dbxref=GenBank:WP_000209020.1;Name=WP_000209020.1;Ontology_term=GO:0019262,GO:0005524,GO:0009384;gbkey=CDS;gene=nanK;go_function=ATP binding|0005524||IEA,N-acylmannosamine kinase activity|0009384||IEA;go_process=N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417689.4;locus_tag=AC56_RS05970;product=N-acetylmannosamine kinase;protein_id=WP_000209020.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	71349	72038	.	-	.	ID=gene-AC56_RS05965;Name=nanE;gbkey=Gene;gene=nanE;gene_biotype=protein_coding;locus_tag=AC56_RS05965;old_locus_tag=AC56_3595
NZ_JJLS01000256.1	Protein Homology	CDS	71349	72038	.	-	0	ID=cds-WP_001300570.1;Parent=gene-AC56_RS05965;Dbxref=GenBank:WP_001300570.1;Name=WP_001300570.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;gene=nanE;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709016.2;locus_tag=AC56_RS05965;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_001300570.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	72086	73576	.	-	.	ID=gene-AC56_RS05960;Name=nanT;gbkey=Gene;gene=nanT;gene_biotype=protein_coding;locus_tag=AC56_RS05960;old_locus_tag=AC56_3596
NZ_JJLS01000256.1	Protein Homology	CDS	72086	73576	.	-	0	ID=cds-WP_000108459.1;Parent=gene-AC56_RS05960;Dbxref=GenBank:WP_000108459.1;Name=WP_000108459.1;gbkey=CDS;gene=nanT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312124.2;locus_tag=AC56_RS05960;product=sialic acid transporter NanT;protein_id=WP_000108459.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	73685	74578	.	-	.	ID=gene-AC56_RS05955;Name=nanA;gbkey=Gene;gene=nanA;gene_biotype=protein_coding;locus_tag=AC56_RS05955;old_locus_tag=AC56_3597
NZ_JJLS01000256.1	Protein Homology	CDS	73685	74578	.	-	0	ID=cds-WP_000224714.1;Parent=gene-AC56_RS05955;Dbxref=GenBank:WP_000224714.1;Name=WP_000224714.1;Ontology_term=GO:0005975,GO:0008747;gbkey=CDS;gene=nanA;go_function=N-acetylneuraminate lyase activity|0008747||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312125.1;locus_tag=AC56_RS05955;product=N-acetylneuraminate lyase;protein_id=WP_000224714.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	74700	75491	.	-	.	ID=gene-AC56_RS05950;Name=nanR;gbkey=Gene;gene=nanR;gene_biotype=protein_coding;locus_tag=AC56_RS05950;old_locus_tag=AC56_3598
NZ_JJLS01000256.1	Protein Homology	CDS	74700	75491	.	-	0	ID=cds-WP_000523845.1;Parent=gene-AC56_RS05950;Dbxref=GenBank:WP_000523845.1;Name=WP_000523845.1;gbkey=CDS;gene=nanR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417693.3;locus_tag=AC56_RS05950;product=transcriptional regulator NanR;protein_id=WP_000523845.1;transl_table=11
NZ_JJLS01000256.1	RefSeq	gene	75932	76629	.	-	.	ID=gene-AC56_RS05945;Name=AC56_RS05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS05945;old_locus_tag=AC56_3599
NZ_JJLS01000256.1	Protein Homology	CDS	76380	76629	.	-	0	ID=cds-WP_225321517.1;Parent=gene-AC56_RS05945;Dbxref=GenBank:WP_225321517.1;Name=WP_225321517.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=AC56_RS05945;product=IS1 family transposase;protein_id=WP_225321517.1;transl_table=11
NZ_JJLS01000256.1	Protein Homology	CDS	75932	76380	.	-	2	ID=cds-WP_225321517.1;Parent=gene-AC56_RS05945;Dbxref=GenBank:WP_225321517.1;Name=WP_225321517.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=AC56_RS05945;product=IS1 family transposase;protein_id=WP_225321517.1;transl_table=11
##sequence-region NZ_JJLS01000257.1 1 52685
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000257.1	RefSeq	region	1	52685	.	+	.	ID=NZ_JJLS01000257.1:1..52685;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000257.1	RefSeq	pseudogene	1	579	.	-	.	ID=gene-AC56_RS0126990;Name=AC56_RS0126990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0126990;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000257.1	Protein Homology	CDS	1	579	.	-	0	ID=cds-AC56_RS0126990;Parent=gene-AC56_RS0126990;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS0126990;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000257.1	RefSeq	gene	637	1965	.	+	.	ID=gene-AC56_RS05940;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=AC56_RS05940;old_locus_tag=AC56_3602
NZ_JJLS01000257.1	Protein Homology	CDS	637	1965	.	+	0	ID=cds-WP_001338760.1-2;Parent=gene-AC56_RS05940;Dbxref=GenBank:WP_001338760.1;Name=WP_001338760.1;gbkey=CDS;gene=dcuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417694.1;locus_tag=AC56_RS05940;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WP_001338760.1;transl_table=11
NZ_JJLS01000257.1	RefSeq	gene	2008	2505	.	-	.	ID=gene-AC56_RS05935;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=AC56_RS05935;old_locus_tag=AC56_3603
NZ_JJLS01000257.1	Protein Homology	CDS	2008	2505	.	-	0	ID=cds-WP_000366129.1;Parent=gene-AC56_RS05935;Dbxref=GenBank:WP_000366129.1;Name=WP_000366129.1;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312128.1;locus_tag=AC56_RS05935;product=ClpXP protease specificity-enhancing factor;protein_id=WP_000366129.1;transl_table=11
NZ_JJLS01000257.1	RefSeq	gene	2511	3149	.	-	.	ID=gene-AC56_RS05930;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=AC56_RS05930;old_locus_tag=AC56_3604
NZ_JJLS01000257.1	Protein Homology	CDS	2511	3149	.	-	0	ID=cds-WP_000257293.1;Parent=gene-AC56_RS05930;Dbxref=GenBank:WP_000257293.1;Name=WP_000257293.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=sspA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312129.1;locus_tag=AC56_RS05930;product=stringent starvation protein SspA;protein_id=WP_000257293.1;transl_table=11
NZ_JJLS01000257.1	RefSeq	gene	3544	3936	.	-	.	ID=gene-AC56_RS05925;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=AC56_RS05925;old_locus_tag=AC56_3605
NZ_JJLS01000257.1	Protein Homology	CDS	3544	3936	.	-	0	ID=cds-WP_000829818.1;Parent=gene-AC56_RS05925;Dbxref=GenBank:WP_000829818.1;Name=WP_000829818.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=AC56_RS05925;product=30S ribosomal protein S9;protein_id=WP_000829818.1;transl_table=11
NZ_JJLS01000257.1	RefSeq	gene	3952	4380	.	-	.	ID=gene-AC56_RS05920;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=AC56_RS05920;old_locus_tag=AC56_3606
NZ_JJLS01000257.1	Protein Homology	CDS	3952	4380	.	-	0	ID=cds-WP_000847559.1;Parent=gene-AC56_RS05920;Dbxref=GenBank:WP_000847559.1;Name=WP_000847559.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=AC56_RS05920;product=50S ribosomal protein L13;protein_id=WP_000847559.1;transl_table=11
NZ_JJLS01000257.1	RefSeq	gene	4599	5726	.	-	.	ID=gene-AC56_RS05915;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=AC56_RS05915;old_locus_tag=AC56_3607
NZ_JJLS01000257.1	Protein Homology	CDS	4599	5726	.	-	0	ID=cds-WP_032278992.1;Parent=gene-AC56_RS05915;Dbxref=GenBank:WP_032278992.1;Name=WP_032278992.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312132.1;locus_tag=AC56_RS05915;product=cell division protein ZapE;protein_id=WP_032278992.1;transl_table=11
NZ_JJLS01000257.1	RefSeq	gene	5920	6318	.	+	.	ID=gene-AC56_RS05910;Name=zapG;gbkey=Gene;gene=zapG;gene_biotype=protein_coding;locus_tag=AC56_RS05910;old_locus_tag=AC56_3608
NZ_JJLS01000257.1	Protein Homology	CDS	5920	6318	.	+	0	ID=cds-WP_001295270.1;Parent=gene-AC56_RS05910;Dbxref=GenBank:WP_001295270.1;Name=WP_001295270.1;gbkey=CDS;gene=zapG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121352.1;locus_tag=AC56_RS05910;product=Z-ring associated protein ZapG;protein_id=WP_001295270.1;transl_table=11
NZ_JJLS01000257.1	RefSeq	gene	6472	7839	.	+	.	ID=gene-AC56_RS05905;Name=degQ;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;locus_tag=AC56_RS05905;old_locus_tag=AC56_3609
NZ_JJLS01000257.1	Protein Homology	CDS	6472	7839	.	+	0	ID=cds-WP_001295271.1;Parent=gene-AC56_RS05905;Dbxref=GenBank:WP_001295271.1;Name=WP_001295271.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;gene=degQ;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417701.1;locus_tag=AC56_RS05905;product=serine endoprotease DegQ;protein_id=WP_001295271.1;transl_table=11
NZ_JJLS01000257.1	RefSeq	gene	7929	8996	.	+	.	ID=gene-AC56_RS05900;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=AC56_RS05900;old_locus_tag=AC56_3610
NZ_JJLS01000257.1	Protein Homology	CDS	7929	8996	.	+	0	ID=cds-WP_000497723.1;Parent=gene-AC56_RS05900;Dbxref=GenBank:WP_000497723.1;Name=WP_000497723.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;gene=degS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312135.1;locus_tag=AC56_RS05900;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=WP_000497723.1;transl_table=11
NZ_JJLS01000257.1	RefSeq	gene	9059	9997	.	-	.	ID=gene-AC56_RS05895;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=AC56_RS05895;old_locus_tag=AC56_3611
NZ_JJLS01000257.1	Protein Homology	CDS	9059	9997	.	-	0	ID=cds-WP_001295272.1;Parent=gene-AC56_RS05895;Dbxref=GenBank:WP_001295272.1;Name=WP_001295272.1;Ontology_term=GO:0006099,GO:0030060;gbkey=CDS;gene=mdh;go_function=L-malate dehydrogenase (NAD+) activity|0030060||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1;locus_tag=AC56_RS05895;product=malate dehydrogenase;protein_id=WP_001295272.1;transl_table=11
NZ_JJLS01000257.1	RefSeq	gene	10432	10902	.	+	.	ID=gene-AC56_RS05890;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=AC56_RS05890;old_locus_tag=AC56_3612
NZ_JJLS01000257.1	Protein Homology	CDS	10432	10902	.	+	0	ID=cds-WP_001257846.1;Parent=gene-AC56_RS05890;Dbxref=GenBank:WP_001257846.1;Name=WP_001257846.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257852.1;locus_tag=AC56_RS05890;product=transcriptional regulator ArgR;protein_id=WP_001257846.1;transl_table=11
NZ_JJLS01000257.1	RefSeq	gene	11267	11530	.	+	.	ID=gene-AC56_RS05885;Name=yhcN;gbkey=Gene;gene=yhcN;gene_biotype=protein_coding;locus_tag=AC56_RS05885;old_locus_tag=AC56_3613
NZ_JJLS01000257.1	Protein Homology	CDS	11267	11530	.	+	0	ID=cds-WP_000695690.1;Parent=gene-AC56_RS05885;Dbxref=GenBank:WP_000695690.1;Name=WP_000695690.1;gbkey=CDS;gene=yhcN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417705.2;locus_tag=AC56_RS05885;product=peroxide/acid stress response protein YhcN;protein_id=WP_000695690.1;transl_table=11
NZ_JJLS01000257.1	RefSeq	gene	11586	11858	.	-	.	ID=gene-AC56_RS05880;Name=yhcO;gbkey=Gene;gene=yhcO;gene_biotype=protein_coding;locus_tag=AC56_RS05880;old_locus_tag=AC56_3614
NZ_JJLS01000257.1	Protein Homology	CDS	11586	11858	.	-	0	ID=cds-WP_001029013.1;Parent=gene-AC56_RS05880;Dbxref=GenBank:WP_001029013.1;Name=WP_001029013.1;gbkey=CDS;gene=yhcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312139.1;locus_tag=AC56_RS05880;product=barstar family protein;protein_id=WP_001029013.1;transl_table=11
NZ_JJLS01000257.1	RefSeq	gene	11950	13917	.	-	.	ID=gene-AC56_RS05875;Name=aaeB;gbkey=Gene;gene=aaeB;gene_biotype=protein_coding;locus_tag=AC56_RS05875;old_locus_tag=AC56_3615
NZ_JJLS01000257.1	Protein Homology	CDS	11950	13917	.	-	0	ID=cds-WP_032278994.1;Parent=gene-AC56_RS05875;Dbxref=GenBank:WP_032278994.1;Name=WP_032278994.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709037.1;locus_tag=AC56_RS05875;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WP_032278994.1;transl_table=11
NZ_JJLS01000257.1	RefSeq	gene	13923	14855	.	-	.	ID=gene-AC56_RS05870;Name=aaeA;gbkey=Gene;gene=aaeA;gene_biotype=protein_coding;locus_tag=AC56_RS05870;old_locus_tag=AC56_3616
NZ_JJLS01000257.1	Protein Homology	CDS	13923	14855	.	-	0	ID=cds-WP_000854033.1;Parent=gene-AC56_RS05870;Dbxref=GenBank:WP_000854033.1;Name=WP_000854033.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417708.1;locus_tag=AC56_RS05870;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WP_000854033.1;transl_table=11
NZ_JJLS01000257.1	RefSeq	gene	14863	15066	.	-	.	ID=gene-AC56_RS05865;Name=aaeX;gbkey=Gene;gene=aaeX;gene_biotype=protein_coding;locus_tag=AC56_RS05865;old_locus_tag=AC56_3617
NZ_JJLS01000257.1	Protein Homology	CDS	14863	15066	.	-	0	ID=cds-WP_000051841.1;Parent=gene-AC56_RS05865;Dbxref=GenBank:WP_000051841.1;Name=WP_000051841.1;gbkey=CDS;gene=aaeX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051842.1;locus_tag=AC56_RS05865;product=p-hydroxybenzoic acid efflux pump operon protein AaeX;protein_id=WP_000051841.1;transl_table=11
NZ_JJLS01000257.1	RefSeq	gene	15249	16178	.	+	.	ID=gene-AC56_RS05860;Name=aaeR;gbkey=Gene;gene=aaeR;gene_biotype=protein_coding;locus_tag=AC56_RS05860;old_locus_tag=AC56_3618
NZ_JJLS01000257.1	Protein Homology	CDS	15249	16178	.	+	0	ID=cds-WP_001507975.1;Parent=gene-AC56_RS05860;Dbxref=GenBank:WP_001507975.1;Name=WP_001507975.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=aaeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312143.1;locus_tag=AC56_RS05860;product=HTH-type transcriptional activator AaeR;protein_id=WP_001507975.1;transl_table=11
NZ_JJLS01000257.1	RefSeq	gene	16312	17757	.	-	.	ID=gene-AC56_RS05855;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=AC56_RS05855;old_locus_tag=AC56_3619
NZ_JJLS01000257.1	Protein Homology	CDS	16312	17757	.	-	0	ID=cds-WP_000055909.1;Parent=gene-AC56_RS05855;Dbxref=GenBank:WP_000055909.1;Name=WP_000055909.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417711.1;locus_tag=AC56_RS05855;product=metalloprotease TldD;protein_id=WP_000055909.1;transl_table=11
NZ_JJLS01000257.1	RefSeq	gene	18369	22169	.	-	.	ID=gene-AC56_RS05850;Name=yhdP;gbkey=Gene;gene=yhdP;gene_biotype=protein_coding;locus_tag=AC56_RS05850;old_locus_tag=AC56_3620
NZ_JJLS01000257.1	Protein Homology	CDS	18369	22169	.	-	0	ID=cds-WP_032278997.1;Parent=gene-AC56_RS05850;Dbxref=GenBank:WP_032278997.1;Name=WP_032278997.1;gbkey=CDS;gene=yhdP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026208.1;locus_tag=AC56_RS05850;product=AsmA2 domain-containing protein YhdP;protein_id=WP_032278997.1;transl_table=11
NZ_JJLS01000257.1	RefSeq	gene	22237	23706	.	-	.	ID=gene-AC56_RS05845;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=AC56_RS05845;old_locus_tag=AC56_3621
NZ_JJLS01000257.1	Protein Homology	CDS	22237	23706	.	-	0	ID=cds-WP_000123197.1;Parent=gene-AC56_RS05845;Dbxref=GenBank:WP_000123197.1;Name=WP_000123197.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1;locus_tag=AC56_RS05845;product=ribonuclease G;protein_id=WP_000123197.1;transl_table=11
NZ_JJLS01000257.1	RefSeq	gene	23696	24289	.	-	.	ID=gene-AC56_RS05840;Name=yhdE;gbkey=Gene;gene=yhdE;gene_biotype=protein_coding;locus_tag=AC56_RS05840;old_locus_tag=AC56_3622
NZ_JJLS01000257.1	Protein Homology	CDS	23696	24289	.	-	0	ID=cds-WP_000203096.1;Parent=gene-AC56_RS05840;Dbxref=GenBank:WP_000203096.1;Name=WP_000203096.1;gbkey=CDS;gene=yhdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709043.1;locus_tag=AC56_RS05840;product=nucleoside triphosphate pyrophosphatase YhdE;protein_id=WP_000203096.1;transl_table=11
NZ_JJLS01000257.1	RefSeq	gene	24298	24786	.	-	.	ID=gene-AC56_RS05835;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=AC56_RS05835;old_locus_tag=AC56_3623
NZ_JJLS01000257.1	Protein Homology	CDS	24298	24786	.	-	0	ID=cds-WP_032278998.1;Parent=gene-AC56_RS05835;Dbxref=GenBank:WP_032278998.1;Name=WP_032278998.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001487551.1;locus_tag=AC56_RS05835;product=rod shape-determining protein MreD;protein_id=WP_032278998.1;transl_table=11
NZ_JJLS01000257.1	RefSeq	gene	24786	25889	.	-	.	ID=gene-AC56_RS05830;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=AC56_RS05830;old_locus_tag=AC56_3624
NZ_JJLS01000257.1	Protein Homology	CDS	24786	25889	.	-	0	ID=cds-WP_000802516.1;Parent=gene-AC56_RS05830;Dbxref=GenBank:WP_000802516.1;Name=WP_000802516.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312149.1;locus_tag=AC56_RS05830;product=rod shape-determining protein MreC;protein_id=WP_000802516.1;transl_table=11
NZ_JJLS01000257.1	RefSeq	gene	25955	26998	.	-	.	ID=gene-AC56_RS05825;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=AC56_RS05825;old_locus_tag=AC56_3625
NZ_JJLS01000257.1	Protein Homology	CDS	25955	26998	.	-	0	ID=cds-WP_000913396.1;Parent=gene-AC56_RS05825;Dbxref=GenBank:WP_000913396.1;Name=WP_000913396.1;gbkey=CDS;gene=mreB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=AC56_RS05825;product=rod shape-determining protein MreB;protein_id=WP_000913396.1;transl_table=11
NZ_JJLS01000257.1	RefSeq	gene	26955	27158	.	+	.	ID=gene-AC56_RS30175;Name=AC56_RS30175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS30175
NZ_JJLS01000257.1	GeneMarkS-2+	CDS	26955	27158	.	+	0	ID=cds-WP_001416321.1;Parent=gene-AC56_RS30175;Dbxref=GenBank:WP_001416321.1;Name=WP_001416321.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS30175;product=hypothetical protein;protein_id=WP_001416321.1;transl_table=11
NZ_JJLS01000257.1	RefSeq	gene	27303	29243	.	-	.	ID=gene-AC56_RS05820;Name=csrD;gbkey=Gene;gene=csrD;gene_biotype=protein_coding;locus_tag=AC56_RS05820;old_locus_tag=AC56_3626
NZ_JJLS01000257.1	Protein Homology	CDS	27303	29243	.	-	0	ID=cds-WP_001241469.1;Parent=gene-AC56_RS05820;Dbxref=GenBank:WP_001241469.1;Name=WP_001241469.1;gbkey=CDS;gene=csrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417718.1;locus_tag=AC56_RS05820;product=RNase E specificity factor CsrD;protein_id=WP_001241469.1;transl_table=11
NZ_JJLS01000257.1	RefSeq	gene	29395	30369	.	+	.	ID=gene-AC56_RS05815;Name=yhdH;gbkey=Gene;gene=yhdH;gene_biotype=protein_coding;locus_tag=AC56_RS05815;old_locus_tag=AC56_3627
NZ_JJLS01000257.1	Protein Homology	CDS	29395	30369	.	+	0	ID=cds-WP_032278999.1;Parent=gene-AC56_RS05815;Dbxref=GenBank:WP_032278999.1;Name=WP_032278999.1;Ontology_term=GO:0004022,GO:0008270,GO:0030554;gbkey=CDS;gene=yhdH;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417719.1;locus_tag=AC56_RS05815;product=MDR family oxidoreductase;protein_id=WP_032278999.1;transl_table=11
NZ_JJLS01000257.1	RefSeq	gene	31347	31817	.	+	.	ID=gene-AC56_RS05805;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=AC56_RS05805;old_locus_tag=AC56_3630
NZ_JJLS01000257.1	Protein Homology	CDS	31347	31817	.	+	0	ID=cds-WP_000354622.1;Parent=gene-AC56_RS05805;Dbxref=GenBank:WP_000354622.1;Name=WP_000354622.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312154.1;locus_tag=AC56_RS05805;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_000354622.1;transl_table=11
NZ_JJLS01000257.1	RefSeq	gene	31828	33177	.	+	.	ID=gene-AC56_RS05800;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=AC56_RS05800;old_locus_tag=AC56_3631
NZ_JJLS01000257.1	Protein Homology	CDS	31828	33177	.	+	0	ID=cds-WP_000884622.1;Parent=gene-AC56_RS05800;Dbxref=GenBank:WP_000884622.1;Name=WP_000884622.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009483995.1;locus_tag=AC56_RS05800;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_000884622.1;transl_table=11
NZ_JJLS01000257.1	RefSeq	gene	33286	33528	.	+	.	ID=gene-AC56_RS05795;Name=yhdT;gbkey=Gene;gene=yhdT;gene_biotype=protein_coding;locus_tag=AC56_RS05795;old_locus_tag=AC56_3632
NZ_JJLS01000257.1	Protein Homology	CDS	33286	33528	.	+	0	ID=cds-WP_000381173.1;Parent=gene-AC56_RS05795;Dbxref=GenBank:WP_000381173.1;Name=WP_000381173.1;gbkey=CDS;gene=yhdT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417723.1;locus_tag=AC56_RS05795;product=YhdT family protein;protein_id=WP_000381173.1;transl_table=11
NZ_JJLS01000257.1	RefSeq	gene	33518	34969	.	+	.	ID=gene-AC56_RS05790;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=AC56_RS05790;old_locus_tag=AC56_3633
NZ_JJLS01000257.1	Protein Homology	CDS	33518	34969	.	+	0	ID=cds-WP_001428262.1;Parent=gene-AC56_RS05790;Dbxref=GenBank:WP_001428262.1;Name=WP_001428262.1;Ontology_term=GO:0015887,GO:0036376,GO:0015081,GO:0015233,GO:0016020;gbkey=CDS;gene=panF;go_component=membrane|0016020||IEA;go_function=sodium ion transmembrane transporter activity|0015081||IEA,pantothenate transmembrane transporter activity|0015233||IEA;go_process=pantothenate transmembrane transport|0015887||IEA,sodium ion export across plasma membrane|0036376||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312157.2;locus_tag=AC56_RS05790;product=sodium/pantothenate symporter;protein_id=WP_001428262.1;transl_table=11
NZ_JJLS01000257.1	RefSeq	gene	34981	35862	.	+	.	ID=gene-AC56_RS05785;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=AC56_RS05785;old_locus_tag=AC56_3634
NZ_JJLS01000257.1	Protein Homology	CDS	34981	35862	.	+	0	ID=cds-WP_001145827.1;Parent=gene-AC56_RS05785;Dbxref=GenBank:WP_001145827.1;Name=WP_001145827.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312158.1;locus_tag=AC56_RS05785;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_001145827.1;transl_table=11
NZ_JJLS01000257.1	RefSeq	gene	36191	37156	.	+	.	ID=gene-AC56_RS05780;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=AC56_RS05780;old_locus_tag=AC56_3635
NZ_JJLS01000257.1	Protein Homology	CDS	36191	37156	.	+	0	ID=cds-WP_001219652.1;Parent=gene-AC56_RS05780;Dbxref=GenBank:WP_001219652.1;Name=WP_001219652.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785970.1;locus_tag=AC56_RS05780;product=tRNA dihydrouridine synthase DusB;protein_id=WP_001219652.1;transl_table=11
NZ_JJLS01000257.1	RefSeq	gene	37182	37478	.	+	.	ID=gene-AC56_RS05775;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=AC56_RS05775;old_locus_tag=AC56_3636
NZ_JJLS01000257.1	Protein Homology	CDS	37182	37478	.	+	0	ID=cds-WP_000462905.1;Parent=gene-AC56_RS05775;Dbxref=GenBank:WP_000462905.1;Name=WP_000462905.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=AC56_RS05775;product=DNA-binding transcriptional regulator Fis;protein_id=WP_000462905.1;transl_table=11
NZ_JJLS01000257.1	RefSeq	gene	37564	38448	.	+	.	ID=gene-AC56_RS05770;Name=yhdJ;gbkey=Gene;gene=yhdJ;gene_biotype=protein_coding;locus_tag=AC56_RS05770;old_locus_tag=AC56_3637
NZ_JJLS01000257.1	Protein Homology	CDS	37564	38448	.	+	0	ID=cds-WP_001258917.1;Parent=gene-AC56_RS05770;Dbxref=GenBank:WP_001258917.1;Name=WP_001258917.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;gene=yhdJ;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312161.2;locus_tag=AC56_RS05770;product=adenine-specific DNA-methyltransferase;protein_id=WP_001258917.1;transl_table=11
NZ_JJLS01000257.1	RefSeq	gene	38532	38711	.	+	.	ID=gene-AC56_RS0127015;Name=yhdU;gbkey=Gene;gene=yhdU;gene_biotype=protein_coding;locus_tag=AC56_RS0127015
NZ_JJLS01000257.1	Protein Homology	CDS	38532	38711	.	+	0	ID=cds-WP_001295275.1;Parent=gene-AC56_RS0127015;Dbxref=GenBank:WP_001295275.1;Name=WP_001295275.1;gbkey=CDS;gene=yhdU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312162.1;locus_tag=AC56_RS0127015;product=DUF2556 family protein;protein_id=WP_001295275.1;transl_table=11
NZ_JJLS01000257.1	RefSeq	gene	38714	39376	.	-	.	ID=gene-AC56_RS05765;Name=acrS;gbkey=Gene;gene=acrS;gene_biotype=protein_coding;locus_tag=AC56_RS05765;old_locus_tag=AC56_3639
NZ_JJLS01000257.1	Protein Homology	CDS	38714	39376	.	-	0	ID=cds-WP_022581509.1;Parent=gene-AC56_RS05765;Dbxref=GenBank:WP_022581509.1;Name=WP_022581509.1;gbkey=CDS;gene=acrS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312163.1;locus_tag=AC56_RS05765;product=multidrug efflux transporter transcriptional repressor AcrS;protein_id=WP_022581509.1;transl_table=11
NZ_JJLS01000257.1	RefSeq	gene	39775	40932	.	+	.	ID=gene-AC56_RS05760;Name=acrE;gbkey=Gene;gene=acrE;gene_biotype=protein_coding;locus_tag=AC56_RS05760;old_locus_tag=AC56_3640
NZ_JJLS01000257.1	Protein Homology	CDS	39775	40932	.	+	0	ID=cds-WP_032279003.1;Parent=gene-AC56_RS05760;Dbxref=GenBank:WP_032279003.1;Name=WP_032279003.1;gbkey=CDS;gene=acrE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417731.1;locus_tag=AC56_RS05760;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrE;protein_id=WP_032279003.1;transl_table=11
NZ_JJLS01000257.1	RefSeq	gene	40944	44048	.	+	.	ID=gene-AC56_RS05755;Name=acrF;gbkey=Gene;gene=acrF;gene_biotype=protein_coding;locus_tag=AC56_RS05755;old_locus_tag=AC56_3641
NZ_JJLS01000257.1	Protein Homology	CDS	40944	44048	.	+	0	ID=cds-WP_001273221.1;Parent=gene-AC56_RS05755;Dbxref=GenBank:WP_001273221.1;Name=WP_001273221.1;gbkey=CDS;gene=acrF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417732.1;locus_tag=AC56_RS05755;product=multidrug efflux RND transporter permease subunit AcrF;protein_id=WP_001273221.1;transl_table=11
NZ_JJLS01000257.1	RefSeq	gene	44301	44522	.	+	.	ID=gene-AC56_RS05750;Name=AC56_RS05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS05750;old_locus_tag=AC56_3642
NZ_JJLS01000257.1	Protein Homology	CDS	44301	44522	.	+	0	ID=cds-WP_000825639.1;Parent=gene-AC56_RS05750;Dbxref=GenBank:WP_000825639.1;Name=WP_000825639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312167.1;locus_tag=AC56_RS05750;product=membrane protein;protein_id=WP_000825639.1;transl_table=11
NZ_JJLS01000257.1	RefSeq	gene	44953	45978	.	+	.	ID=gene-AC56_RS05745;Name=AC56_RS05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS05745;old_locus_tag=AC56_3644
NZ_JJLS01000257.1	Protein Homology	CDS	44953	45978	.	+	0	ID=cds-WP_000738568.1;Parent=gene-AC56_RS05745;Dbxref=GenBank:WP_000738568.1;Name=WP_000738568.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121390.1;locus_tag=AC56_RS05745;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_000738568.1;transl_table=11
NZ_JJLS01000257.1	RefSeq	gene	46046	47227	.	+	.	ID=gene-AC56_RS05740;Name=yhdX;gbkey=Gene;gene=yhdX;gene_biotype=protein_coding;locus_tag=AC56_RS05740;old_locus_tag=AC56_3645
NZ_JJLS01000257.1	Protein Homology	CDS	46046	47227	.	+	0	ID=cds-WP_000019655.1;Parent=gene-AC56_RS05740;Dbxref=GenBank:WP_000019655.1;Name=WP_000019655.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;gene=yhdX;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026209.1;locus_tag=AC56_RS05740;product=amino acid ABC transporter permease;protein_id=WP_000019655.1;transl_table=11
NZ_JJLS01000257.1	RefSeq	gene	47237	48340	.	+	.	ID=gene-AC56_RS05735;Name=yhdY;gbkey=Gene;gene=yhdY;gene_biotype=protein_coding;locus_tag=AC56_RS05735;old_locus_tag=AC56_3646
NZ_JJLS01000257.1	Protein Homology	CDS	47237	48340	.	+	0	ID=cds-WP_001301413.1;Parent=gene-AC56_RS05735;Dbxref=GenBank:WP_001301413.1;Name=WP_001301413.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;gene=yhdY;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417736.2;locus_tag=AC56_RS05735;product=amino acid ABC transporter permease;protein_id=WP_001301413.1;transl_table=11
NZ_JJLS01000257.1	RefSeq	gene	48348	49106	.	+	.	ID=gene-AC56_RS05730;Name=yhdZ;gbkey=Gene;gene=yhdZ;gene_biotype=protein_coding;locus_tag=AC56_RS05730;old_locus_tag=AC56_3647
NZ_JJLS01000257.1	Protein Homology	CDS	48348	49106	.	+	0	ID=cds-WP_000078349.1;Parent=gene-AC56_RS05730;Dbxref=GenBank:WP_000078349.1;Name=WP_000078349.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=yhdZ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417737.1;locus_tag=AC56_RS05730;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_000078349.1;transl_table=11
NZ_JJLS01000257.1	RefSeq	gene	49337	49452	.	-	.	ID=gene-AC56_RS05725;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AC56_RS05725;old_locus_tag=AC56_3648
NZ_JJLS01000257.1	cmsearch	rRNA	49337	49452	.	-	.	ID=rna-AC56_RS05725;Parent=gene-AC56_RS05725;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS05725;product=5S ribosomal RNA
NZ_JJLS01000257.1	cmsearch	exon	49337	49452	.	-	.	ID=exon-AC56_RS05725-1;Parent=rna-AC56_RS05725;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS05725;product=5S ribosomal RNA
NZ_JJLS01000257.1	RefSeq	gene	49492	49567	.	-	.	ID=gene-AC56_RS05720;Name=AC56_RS05720;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS05720;old_locus_tag=AC56_3649
NZ_JJLS01000257.1	tRNAscan-SE	tRNA	49492	49567	.	-	.	ID=rna-AC56_RS05720;Parent=gene-AC56_RS05720;anticodon=(pos:complement(49532..49534));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS05720;product=tRNA-Thr
NZ_JJLS01000257.1	tRNAscan-SE	exon	49492	49567	.	-	.	ID=exon-AC56_RS05720-1;Parent=rna-AC56_RS05720;anticodon=(pos:complement(49532..49534));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS05720;product=tRNA-Thr
NZ_JJLS01000257.1	RefSeq	gene	49582	49697	.	-	.	ID=gene-AC56_RS05715;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AC56_RS05715;old_locus_tag=AC56_3650
NZ_JJLS01000257.1	cmsearch	rRNA	49582	49697	.	-	.	ID=rna-AC56_RS05715;Parent=gene-AC56_RS05715;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS05715;product=5S ribosomal RNA
NZ_JJLS01000257.1	cmsearch	exon	49582	49697	.	-	.	ID=exon-AC56_RS05715-1;Parent=rna-AC56_RS05715;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS05715;product=5S ribosomal RNA
NZ_JJLS01000257.1	RefSeq	gene	49793	52685	.	-	.	ID=gene-AC56_RS0127025;Name=AC56_RS0127025;end_range=52685,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC56_RS0127025;partial=true
NZ_JJLS01000257.1	cmsearch	rRNA	49793	52685	.	-	.	ID=rna-AC56_RS0127025;Parent=gene-AC56_RS0127025;Dbxref=RFAM:RF02541;end_range=52685,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS0127025;partial=true;product=23S ribosomal RNA
NZ_JJLS01000257.1	cmsearch	exon	49793	52685	.	-	.	ID=exon-AC56_RS0127025-1;Parent=rna-AC56_RS0127025;Dbxref=RFAM:RF02541;end_range=52685,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS0127025;partial=true;product=23S ribosomal RNA
##sequence-region NZ_JJLS01000258.1 1 29092
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000258.1	RefSeq	region	1	29092	.	+	.	ID=NZ_JJLS01000258.1:1..29092;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000258.1	RefSeq	gene	1	1489	.	-	.	ID=gene-AC56_RS0127030;Name=AC56_RS0127030;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC56_RS0127030;partial=true;start_range=.,1
NZ_JJLS01000258.1	cmsearch	rRNA	1	1489	.	-	.	ID=rna-AC56_RS0127030;Parent=gene-AC56_RS0127030;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS0127030;partial=true;product=16S ribosomal RNA;start_range=.,1
NZ_JJLS01000258.1	cmsearch	exon	1	1489	.	-	.	ID=exon-AC56_RS0127030-1;Parent=rna-AC56_RS0127030;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS0127030;partial=true;product=16S ribosomal RNA;start_range=.,1
NZ_JJLS01000258.1	RefSeq	gene	1963	2517	.	+	.	ID=gene-AC56_RS05710;Name=yrdA;gbkey=Gene;gene=yrdA;gene_biotype=protein_coding;locus_tag=AC56_RS05710;old_locus_tag=AC56_3655
NZ_JJLS01000258.1	Protein Homology	CDS	1963	2517	.	+	0	ID=cds-WP_001286216.1;Parent=gene-AC56_RS05710;Dbxref=GenBank:WP_001286216.1;Name=WP_001286216.1;Ontology_term=GO:0046872;gbkey=CDS;gene=yrdA;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417738.4;locus_tag=AC56_RS05710;product=gamma carbonic anhydrase family protein;protein_id=WP_001286216.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	2493	2750	.	-	.	ID=gene-AC56_RS0127035;Name=yrdB;gbkey=Gene;gene=yrdB;gene_biotype=protein_coding;locus_tag=AC56_RS0127035;old_locus_tag=AC56_3656
NZ_JJLS01000258.1	Protein Homology	CDS	2493	2750	.	-	0	ID=cds-WP_001070563.1;Parent=gene-AC56_RS0127035;Dbxref=GenBank:WP_001070563.1;Name=WP_001070563.1;gbkey=CDS;gene=yrdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417739.1;locus_tag=AC56_RS0127035;product=DUF1488 domain-containing protein;protein_id=WP_001070563.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	2747	3565	.	-	.	ID=gene-AC56_RS05705;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=AC56_RS05705;old_locus_tag=AC56_3657
NZ_JJLS01000258.1	Protein Homology	CDS	2747	3565	.	-	0	ID=cds-WP_000451243.1;Parent=gene-AC56_RS05705;Dbxref=GenBank:WP_000451243.1;Name=WP_000451243.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417740.1;locus_tag=AC56_RS05705;product=shikimate dehydrogenase;protein_id=WP_000451243.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	3570	4142	.	-	.	ID=gene-AC56_RS05700;Name=tsaC;gbkey=Gene;gene=tsaC;gene_biotype=protein_coding;locus_tag=AC56_RS05700;old_locus_tag=AC56_3658
NZ_JJLS01000258.1	Protein Homology	CDS	3570	4142	.	-	0	ID=cds-WP_001301412.1;Parent=gene-AC56_RS05700;Dbxref=GenBank:WP_001301412.1;Name=WP_001301412.1;Ontology_term=GO:0002949,GO:0003725,GO:0005524;gbkey=CDS;gene=tsaC;go_function=double-stranded RNA binding|0003725||IEA,ATP binding|0005524||IEA;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417741.1;locus_tag=AC56_RS05700;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=WP_001301412.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	4147	4689	.	-	.	ID=gene-AC56_RS0127040;Name=yrdD;gbkey=Gene;gene=yrdD;gene_biotype=protein_coding;locus_tag=AC56_RS0127040
NZ_JJLS01000258.1	Protein Homology	CDS	4147	4689	.	-	0	ID=cds-WP_001129722.1;Parent=gene-AC56_RS0127040;Dbxref=GenBank:WP_001129722.1;Name=WP_001129722.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916,GO:0005694;gbkey=CDS;gene=yrdD;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026210.1;locus_tag=AC56_RS0127040;product=DNA topoisomerase family protein;protein_id=WP_001129722.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	4718	5191	.	-	.	ID=gene-AC56_RS05695;Name=smg;gbkey=Gene;gene=smg;gene_biotype=protein_coding;locus_tag=AC56_RS05695;old_locus_tag=AC56_3659
NZ_JJLS01000258.1	Protein Homology	CDS	4718	5191	.	-	0	ID=cds-WP_000460680.1;Parent=gene-AC56_RS05695;Dbxref=GenBank:WP_000460680.1;Name=WP_000460680.1;gbkey=CDS;gene=smg;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134083.1;locus_tag=AC56_RS05695;product=DUF494 family protein Smg;protein_id=WP_000460680.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	5163	6287	.	-	.	ID=gene-AC56_RS05690;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=AC56_RS05690;old_locus_tag=AC56_3660
NZ_JJLS01000258.1	Protein Homology	CDS	5163	6287	.	-	0	ID=cds-WP_000228551.1;Parent=gene-AC56_RS05690;Dbxref=GenBank:WP_000228551.1;Name=WP_000228551.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026211.1;locus_tag=AC56_RS05690;product=DNA-protecting protein DprA;protein_id=WP_000228551.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	6417	6926	.	+	.	ID=gene-AC56_RS05685;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=AC56_RS05685;old_locus_tag=AC56_3661
NZ_JJLS01000258.1	Protein Homology	CDS	6417	6926	.	+	0	ID=cds-WP_000114984.1;Parent=gene-AC56_RS05685;Dbxref=GenBank:WP_000114984.1;Name=WP_000114984.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312179.1;locus_tag=AC56_RS05685;product=peptide deformylase;protein_id=WP_000114984.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	6941	7888	.	+	.	ID=gene-AC56_RS05680;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=AC56_RS05680;old_locus_tag=AC56_3662
NZ_JJLS01000258.1	Protein Homology	CDS	6941	7888	.	+	0	ID=cds-WP_032279008.1;Parent=gene-AC56_RS05680;Dbxref=GenBank:WP_032279008.1;Name=WP_032279008.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417746.1;locus_tag=AC56_RS05680;product=methionyl-tRNA formyltransferase;protein_id=WP_032279008.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	7934	9223	.	+	.	ID=gene-AC56_RS05675;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=AC56_RS05675;old_locus_tag=AC56_3663
NZ_JJLS01000258.1	Protein Homology	CDS	7934	9223	.	+	0	ID=cds-WP_001544132.1;Parent=gene-AC56_RS05675;Dbxref=GenBank:WP_001544132.1;Name=WP_001544132.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417747.1;locus_tag=AC56_RS05675;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_001544132.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	9245	10621	.	+	.	ID=gene-AC56_RS05670;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=AC56_RS05670;old_locus_tag=AC56_3664
NZ_JJLS01000258.1	Protein Homology	CDS	9245	10621	.	+	0	ID=cds-WP_000691382.1;Parent=gene-AC56_RS05670;Dbxref=GenBank:WP_000691382.1;Name=WP_000691382.1;Ontology_term=GO:0006813,GO:0015079,GO:0016020;gbkey=CDS;gene=trkA;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=AC56_RS05670;product=Trk system potassium transporter TrkA;protein_id=WP_000691382.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	10751	11161	.	+	.	ID=gene-AC56_RS05665;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=AC56_RS05665;old_locus_tag=AC56_3665
NZ_JJLS01000258.1	Protein Homology	CDS	10751	11161	.	+	0	ID=cds-WP_000022442.1;Parent=gene-AC56_RS05665;Dbxref=GenBank:WP_000022442.1;Name=WP_000022442.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312183.1;locus_tag=AC56_RS05665;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_000022442.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	11158	11376	.	-	.	ID=gene-AC56_RS0127045;Name=arfA;gbkey=Gene;gene=arfA;gene_biotype=protein_coding;locus_tag=AC56_RS0127045
NZ_JJLS01000258.1	Protein Homology	CDS	11158	11376	.	-	0	ID=cds-WP_000092696.1;Parent=gene-AC56_RS0127045;Dbxref=GenBank:WP_000092696.1;Name=WP_000092696.1;gbkey=CDS;gene=arfA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588467.1;locus_tag=AC56_RS0127045;product=alternative ribosome-rescue factor ArfA;protein_id=WP_000092696.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	11432	11857	.	-	.	ID=gene-AC56_RS05660;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=AC56_RS05660;old_locus_tag=AC56_3666
NZ_JJLS01000258.1	Protein Homology	CDS	11432	11857	.	-	0	ID=cds-WP_032279010.1;Parent=gene-AC56_RS05660;Dbxref=GenBank:WP_032279010.1;Name=WP_032279010.1;Ontology_term=GO:0006355,GO:0003677,GO:0008270;gbkey=CDS;gene=zntR;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312184.1;locus_tag=AC56_RS05660;product=Zn(2+)-responsive transcriptional regulator;protein_id=WP_032279010.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	11868	12236	.	-	.	ID=gene-AC56_RS05655;Name=yhdN;gbkey=Gene;gene=yhdN;gene_biotype=protein_coding;locus_tag=AC56_RS05655;old_locus_tag=AC56_3667
NZ_JJLS01000258.1	Protein Homology	CDS	11868	12236	.	-	0	ID=cds-WP_000266486.1;Parent=gene-AC56_RS05655;Dbxref=GenBank:WP_000266486.1;Name=WP_000266486.1;gbkey=CDS;gene=yhdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417752.1;locus_tag=AC56_RS05655;product=DUF1992 domain-containing protein;protein_id=WP_000266486.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	12343	12726	.	-	.	ID=gene-AC56_RS05650;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=AC56_RS05650;old_locus_tag=AC56_3668
NZ_JJLS01000258.1	Protein Homology	CDS	12343	12726	.	-	0	ID=cds-WP_001216368.1;Parent=gene-AC56_RS05650;Dbxref=GenBank:WP_001216368.1;Name=WP_001216368.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312186.1;locus_tag=AC56_RS05650;product=50S ribosomal protein L17;protein_id=WP_001216368.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	12767	13756	.	-	.	ID=gene-AC56_RS05645;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=AC56_RS05645;old_locus_tag=AC56_3669
NZ_JJLS01000258.1	Protein Homology	CDS	12767	13756	.	-	0	ID=cds-WP_001162094.1;Parent=gene-AC56_RS05645;Dbxref=GenBank:WP_001162094.1;Name=WP_001162094.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoA;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=AC56_RS05645;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_001162094.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	13782	14402	.	-	.	ID=gene-AC56_RS05640;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=AC56_RS05640;old_locus_tag=AC56_3670
NZ_JJLS01000258.1	Protein Homology	CDS	13782	14402	.	-	0	ID=cds-WP_000135224.1;Parent=gene-AC56_RS05640;Dbxref=GenBank:WP_000135224.1;Name=WP_000135224.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=AC56_RS05640;product=30S ribosomal protein S4;protein_id=WP_000135224.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	14436	14825	.	-	.	ID=gene-AC56_RS05635;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=AC56_RS05635;old_locus_tag=AC56_3671
NZ_JJLS01000258.1	Protein Homology	CDS	14436	14825	.	-	0	ID=cds-WP_001029684.1;Parent=gene-AC56_RS05635;Dbxref=GenBank:WP_001029684.1;Name=WP_001029684.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=AC56_RS05635;product=30S ribosomal protein S11;protein_id=WP_001029684.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	14842	15198	.	-	.	ID=gene-AC56_RS05630;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=AC56_RS05630;old_locus_tag=AC56_3672
NZ_JJLS01000258.1	Protein Homology	CDS	14842	15198	.	-	0	ID=cds-WP_000090775.1;Parent=gene-AC56_RS05630;Dbxref=GenBank:WP_000090775.1;Name=WP_000090775.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1;locus_tag=AC56_RS05630;product=30S ribosomal protein S13;protein_id=WP_000090775.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	15345	15461	.	-	.	ID=gene-AC56_RS0127050;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=AC56_RS0127050
NZ_JJLS01000258.1	Protein Homology	CDS	15345	15461	.	-	0	ID=cds-WP_000868187.1;Parent=gene-AC56_RS0127050;Dbxref=GenBank:WP_000868187.1;Name=WP_000868187.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=AC56_RS0127050;product=50S ribosomal protein L36;protein_id=WP_000868187.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	15493	16824	.	-	.	ID=gene-AC56_RS05625;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=AC56_RS05625;old_locus_tag=AC56_3673
NZ_JJLS01000258.1	Protein Homology	CDS	15493	16824	.	-	0	ID=cds-WP_001464713.1;Parent=gene-AC56_RS05625;Dbxref=GenBank:WP_001464713.1;Name=WP_001464713.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1;locus_tag=AC56_RS05625;product=preprotein translocase subunit SecY;protein_id=WP_001464713.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	16832	17266	.	-	.	ID=gene-AC56_RS05620;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=AC56_RS05620;old_locus_tag=AC56_3674
NZ_JJLS01000258.1	Protein Homology	CDS	16832	17266	.	-	0	ID=cds-WP_001238914.1;Parent=gene-AC56_RS05620;Dbxref=GenBank:WP_001238914.1;Name=WP_001238914.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=AC56_RS05620;product=50S ribosomal protein L15;protein_id=WP_001238914.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	17270	17449	.	-	.	ID=gene-AC56_RS05615;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=AC56_RS05615;old_locus_tag=AC56_3675
NZ_JJLS01000258.1	Protein Homology	CDS	17270	17449	.	-	0	ID=cds-WP_001140433.1;Parent=gene-AC56_RS05615;Dbxref=GenBank:WP_001140433.1;Name=WP_001140433.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=AC56_RS05615;product=50S ribosomal protein L30;protein_id=WP_001140433.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	17453	17956	.	-	.	ID=gene-AC56_RS05610;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=AC56_RS05610;old_locus_tag=AC56_3676
NZ_JJLS01000258.1	Protein Homology	CDS	17453	17956	.	-	0	ID=cds-WP_000940121.1;Parent=gene-AC56_RS05610;Dbxref=GenBank:WP_000940121.1;Name=WP_000940121.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106339.1;locus_tag=AC56_RS05610;product=30S ribosomal protein S5;protein_id=WP_000940121.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	17971	18324	.	-	.	ID=gene-AC56_RS05605;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=AC56_RS05605;old_locus_tag=AC56_3677
NZ_JJLS01000258.1	Protein Homology	CDS	17971	18324	.	-	0	ID=cds-WP_000358960.1;Parent=gene-AC56_RS05605;Dbxref=GenBank:WP_000358960.1;Name=WP_000358960.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=AC56_RS05605;product=50S ribosomal protein L18;protein_id=WP_000358960.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	18334	18867	.	-	.	ID=gene-AC56_RS05600;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=AC56_RS05600;old_locus_tag=AC56_3678
NZ_JJLS01000258.1	Protein Homology	CDS	18334	18867	.	-	0	ID=cds-WP_000091945.1;Parent=gene-AC56_RS05600;Dbxref=GenBank:WP_000091945.1;Name=WP_000091945.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=AC56_RS05600;product=50S ribosomal protein L6;protein_id=WP_000091945.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	18880	19272	.	-	.	ID=gene-AC56_RS05595;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=AC56_RS05595;old_locus_tag=AC56_3679
NZ_JJLS01000258.1	Protein Homology	CDS	18880	19272	.	-	0	ID=cds-WP_000062611.1;Parent=gene-AC56_RS05595;Dbxref=GenBank:WP_000062611.1;Name=WP_000062611.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=AC56_RS05595;product=30S ribosomal protein S8;protein_id=WP_000062611.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	19306	19611	.	-	.	ID=gene-AC56_RS05590;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=AC56_RS05590;old_locus_tag=AC56_3680
NZ_JJLS01000258.1	Protein Homology	CDS	19306	19611	.	-	0	ID=cds-WP_001118930.1;Parent=gene-AC56_RS05590;Dbxref=GenBank:WP_001118930.1;Name=WP_001118930.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1;locus_tag=AC56_RS05590;product=30S ribosomal protein S14;protein_id=WP_001118930.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	19626	20165	.	-	.	ID=gene-AC56_RS05585;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=AC56_RS05585;old_locus_tag=AC56_3681
NZ_JJLS01000258.1	Protein Homology	CDS	19626	20165	.	-	0	ID=cds-WP_001096200.1;Parent=gene-AC56_RS05585;Dbxref=GenBank:WP_001096200.1;Name=WP_001096200.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=AC56_RS05585;product=50S ribosomal protein L5;protein_id=WP_001096200.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	20180	20494	.	-	.	ID=gene-AC56_RS05580;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=AC56_RS05580;old_locus_tag=AC56_3682
NZ_JJLS01000258.1	Protein Homology	CDS	20180	20494	.	-	0	ID=cds-WP_000729185.1;Parent=gene-AC56_RS05580;Dbxref=GenBank:WP_000729185.1;Name=WP_000729185.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=AC56_RS05580;product=50S ribosomal protein L24;protein_id=WP_000729185.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	20505	20876	.	-	.	ID=gene-AC56_RS05575;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=AC56_RS05575;old_locus_tag=AC56_3683
NZ_JJLS01000258.1	Protein Homology	CDS	20505	20876	.	-	0	ID=cds-WP_000613955.1;Parent=gene-AC56_RS05575;Dbxref=GenBank:WP_000613955.1;Name=WP_000613955.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=AC56_RS05575;product=50S ribosomal protein L14;protein_id=WP_000613955.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	21041	21295	.	-	.	ID=gene-AC56_RS05570;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=AC56_RS05570;old_locus_tag=AC56_3684
NZ_JJLS01000258.1	Protein Homology	CDS	21041	21295	.	-	0	ID=cds-WP_000130100.1;Parent=gene-AC56_RS05570;Dbxref=GenBank:WP_000130100.1;Name=WP_000130100.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=AC56_RS05570;product=30S ribosomal protein S17;protein_id=WP_000130100.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	21295	21486	.	-	.	ID=gene-AC56_RS05565;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=AC56_RS05565;old_locus_tag=AC56_3685
NZ_JJLS01000258.1	Protein Homology	CDS	21295	21486	.	-	0	ID=cds-WP_000644741.1;Parent=gene-AC56_RS05565;Dbxref=GenBank:WP_000644741.1;Name=WP_000644741.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1;locus_tag=AC56_RS05565;product=50S ribosomal protein L29;protein_id=WP_000644741.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	21486	21896	.	-	.	ID=gene-AC56_RS05560;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=AC56_RS05560;old_locus_tag=AC56_3686
NZ_JJLS01000258.1	Protein Homology	CDS	21486	21896	.	-	0	ID=cds-WP_000941212.1;Parent=gene-AC56_RS05560;Dbxref=GenBank:WP_000941212.1;Name=WP_000941212.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=AC56_RS05560;product=50S ribosomal protein L16;protein_id=WP_000941212.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	21909	22610	.	-	.	ID=gene-AC56_RS05555;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=AC56_RS05555;old_locus_tag=AC56_3687
NZ_JJLS01000258.1	Protein Homology	CDS	21909	22610	.	-	0	ID=cds-WP_000529945.1;Parent=gene-AC56_RS05555;Dbxref=GenBank:WP_000529945.1;Name=WP_000529945.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1;locus_tag=AC56_RS05555;product=30S ribosomal protein S3;protein_id=WP_000529945.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	22628	22960	.	-	.	ID=gene-AC56_RS05550;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=AC56_RS05550;old_locus_tag=AC56_3688
NZ_JJLS01000258.1	Protein Homology	CDS	22628	22960	.	-	0	ID=cds-WP_000447527.1;Parent=gene-AC56_RS05550;Dbxref=GenBank:WP_000447527.1;Name=WP_000447527.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=AC56_RS05550;product=50S ribosomal protein L22;protein_id=WP_000447527.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	22975	23253	.	-	.	ID=gene-AC56_RS0127055;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=AC56_RS0127055
NZ_JJLS01000258.1	Protein Homology	CDS	22975	23253	.	-	0	ID=cds-WP_001138117.1;Parent=gene-AC56_RS0127055;Dbxref=GenBank:WP_001138117.1;Name=WP_001138117.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=AC56_RS0127055;product=30S ribosomal protein S19;protein_id=WP_001138117.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	23270	24091	.	-	.	ID=gene-AC56_RS05545;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=AC56_RS05545;old_locus_tag=AC56_3690
NZ_JJLS01000258.1	Protein Homology	CDS	23270	24091	.	-	0	ID=cds-WP_000301864.1;Parent=gene-AC56_RS05545;Dbxref=GenBank:WP_000301864.1;Name=WP_000301864.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1;locus_tag=AC56_RS05545;product=50S ribosomal protein L2;protein_id=WP_000301864.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	24109	24411	.	-	.	ID=gene-AC56_RS05540;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=AC56_RS05540;old_locus_tag=AC56_3691
NZ_JJLS01000258.1	Protein Homology	CDS	24109	24411	.	-	0	ID=cds-WP_000617544.1;Parent=gene-AC56_RS05540;Dbxref=GenBank:WP_000617544.1;Name=WP_000617544.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=AC56_RS05540;product=50S ribosomal protein L23;protein_id=WP_000617544.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	24408	25013	.	-	.	ID=gene-AC56_RS05535;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=AC56_RS05535;old_locus_tag=AC56_3692
NZ_JJLS01000258.1	Protein Homology	CDS	24408	25013	.	-	0	ID=cds-WP_000424395.1;Parent=gene-AC56_RS05535;Dbxref=GenBank:WP_000424395.1;Name=WP_000424395.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=AC56_RS05535;product=50S ribosomal protein L4;protein_id=WP_000424395.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	25024	25653	.	-	.	ID=gene-AC56_RS05530;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=AC56_RS05530;old_locus_tag=AC56_3693
NZ_JJLS01000258.1	Protein Homology	CDS	25024	25653	.	-	0	ID=cds-WP_000579833.1;Parent=gene-AC56_RS05530;Dbxref=GenBank:WP_000579833.1;Name=WP_000579833.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=AC56_RS05530;product=50S ribosomal protein L3;protein_id=WP_000579833.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	25686	25997	.	-	.	ID=gene-AC56_RS05525;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=AC56_RS05525;old_locus_tag=AC56_3694
NZ_JJLS01000258.1	Protein Homology	CDS	25686	25997	.	-	0	ID=cds-WP_001181004.1;Parent=gene-AC56_RS05525;Dbxref=GenBank:WP_001181004.1;Name=WP_001181004.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=AC56_RS05525;product=30S ribosomal protein S10;protein_id=WP_001181004.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	26235	26654	.	-	.	ID=gene-AC56_RS05520;Name=gspB;gbkey=Gene;gene=gspB;gene_biotype=protein_coding;locus_tag=AC56_RS05520;old_locus_tag=AC56_3695
NZ_JJLS01000258.1	Protein Homology	CDS	26235	26654	.	-	0	ID=cds-WP_000461449.1;Parent=gene-AC56_RS05520;Dbxref=GenBank:WP_000461449.1;Name=WP_000461449.1;gbkey=CDS;gene=gspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417781.1;locus_tag=AC56_RS05520;product=putative general secretion pathway protein GspB;protein_id=WP_000461449.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	26656	28125	.	-	.	ID=gene-AC56_RS05515;Name=gspA;gbkey=Gene;gene=gspA;gene_biotype=protein_coding;locus_tag=AC56_RS05515;old_locus_tag=AC56_3696
NZ_JJLS01000258.1	Protein Homology	CDS	26656	28125	.	-	0	ID=cds-WP_000107577.1;Parent=gene-AC56_RS05515;Dbxref=GenBank:WP_000107577.1;Name=WP_000107577.1;gbkey=CDS;gene=gspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417782.1;locus_tag=AC56_RS05515;product=type II secretion system protein GspA;protein_id=WP_000107577.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	pseudogene	28305	28568	.	+	.	ID=gene-AC56_RS0127060;Name=AC56_RS0127060;end_range=28568,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0127060;partial=true;pseudo=true
NZ_JJLS01000258.1	Protein Homology	CDS	28305	28568	.	+	0	ID=cds-AC56_RS0127060;Parent=gene-AC56_RS0127060;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=28568,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417783.1;locus_tag=AC56_RS0127060;partial=true;product=type II secretion system protein GspC;pseudo=true;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	28497	28733	.	-	.	ID=gene-AC56_RS33800;Name=AC56_RS33800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33800
NZ_JJLS01000258.1	Protein Homology	CDS	28497	28733	.	-	0	ID=cds-WP_309543538.1;Parent=gene-AC56_RS33800;Dbxref=GenBank:WP_309543538.1;Name=WP_309543538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001340454.1;locus_tag=AC56_RS33800;product=hypothetical protein;protein_id=WP_309543538.1;transl_table=11
NZ_JJLS01000258.1	RefSeq	gene	28715	29092	.	-	.	ID=gene-AC56_RS0127065;Name=AC56_RS0127065;end_range=29092,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0127065;old_locus_tag=AC56_3699;partial=true
NZ_JJLS01000258.1	Protein Homology	CDS	28715	29092	.	-	0	ID=cds-WP_032277684.1-2;Parent=gene-AC56_RS0127065;Dbxref=GenBank:WP_032277684.1;Name=WP_032277684.1;end_range=29092,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS0127065;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032277684.1;transl_table=11
##sequence-region NZ_JJLS01000259.1 1 15360
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000259.1	RefSeq	region	1	15360	.	+	.	ID=NZ_JJLS01000259.1:1..15360;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000259.1	RefSeq	pseudogene	1	396	.	-	.	ID=gene-AC56_RS05505;Name=AC56_RS05505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS05505;old_locus_tag=AC56_3700;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000259.1	Protein Homology	CDS	1	396	.	-	0	ID=cds-AC56_RS05505;Parent=gene-AC56_RS05505;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS05505;partial=true;product=IS5-like element ISKpn26 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000259.1	RefSeq	pseudogene	464	1021	.	+	.	ID=gene-AC56_RS05500;Name=gspC;gbkey=Gene;gene=gspC;gene_biotype=pseudogene;locus_tag=AC56_RS05500;old_locus_tag=AC56_3701;partial=true;pseudo=true;start_range=.,464
NZ_JJLS01000259.1	Protein Homology	CDS	464	1021	.	+	0	ID=cds-AC56_RS05500;Parent=gene-AC56_RS05500;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspC;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417783.1;locus_tag=AC56_RS05500;partial=true;product=type II secretion system protein GspC;pseudo=true;start_range=.,464;transl_table=11
NZ_JJLS01000259.1	RefSeq	gene	1005	2957	.	+	.	ID=gene-AC56_RS05495;Name=gspD;gbkey=Gene;gene=gspD;gene_biotype=protein_coding;locus_tag=AC56_RS05495;old_locus_tag=AC56_3702
NZ_JJLS01000259.1	Protein Homology	CDS	1005	2957	.	+	0	ID=cds-WP_032279021.1;Parent=gene-AC56_RS05495;Dbxref=GenBank:WP_032279021.1;Name=WP_032279021.1;Ontology_term=GO:0015628,GO:0015627,GO:0019867;gbkey=CDS;gene=gspD;go_component=type II protein secretion system complex|0015627||IEA,outer membrane|0019867||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417784.4;locus_tag=AC56_RS05495;product=type II secretion system secretin GspD;protein_id=WP_032279021.1;transl_table=11
NZ_JJLS01000259.1	RefSeq	gene	2967	4448	.	+	.	ID=gene-AC56_RS05490;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=AC56_RS05490;old_locus_tag=AC56_3703
NZ_JJLS01000259.1	Protein Homology	CDS	2967	4448	.	+	0	ID=cds-WP_032279022.1;Parent=gene-AC56_RS05490;Dbxref=GenBank:WP_032279022.1;Name=WP_032279022.1;Ontology_term=GO:0015628,GO:0005524,GO:0015627;gbkey=CDS;gene=gspE;go_component=type II protein secretion system complex|0015627||IEA;go_function=ATP binding|0005524||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417785.1;locus_tag=AC56_RS05490;product=type II secretion system ATPase GspE;protein_id=WP_032279022.1;transl_table=11
NZ_JJLS01000259.1	RefSeq	gene	4445	5641	.	+	.	ID=gene-AC56_RS05485;Name=gspF;gbkey=Gene;gene=gspF;gene_biotype=protein_coding;locus_tag=AC56_RS05485;old_locus_tag=AC56_3704
NZ_JJLS01000259.1	Protein Homology	CDS	4445	5641	.	+	0	ID=cds-WP_032279023.1;Parent=gene-AC56_RS05485;Dbxref=GenBank:WP_032279023.1;Name=WP_032279023.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspF;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417786.1;locus_tag=AC56_RS05485;product=type II secretion system inner membrane protein GspF;protein_id=WP_032279023.1;transl_table=11
NZ_JJLS01000259.1	RefSeq	gene	5651	6088	.	+	.	ID=gene-AC56_RS05480;Name=gspG;gbkey=Gene;gene=gspG;gene_biotype=protein_coding;locus_tag=AC56_RS05480;old_locus_tag=AC56_3705
NZ_JJLS01000259.1	Protein Homology	CDS	5651	6088	.	+	0	ID=cds-WP_001202874.1;Parent=gene-AC56_RS05480;Dbxref=GenBank:WP_001202874.1;Name=WP_001202874.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspG;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417787.1;locus_tag=AC56_RS05480;product=type II secretion system major pseudopilin GspG;protein_id=WP_001202874.1;transl_table=11
NZ_JJLS01000259.1	RefSeq	gene	6096	6605	.	+	.	ID=gene-AC56_RS05475;Name=gspH;gbkey=Gene;gene=gspH;gene_biotype=protein_coding;locus_tag=AC56_RS05475;old_locus_tag=AC56_3706
NZ_JJLS01000259.1	Protein Homology	CDS	6096	6605	.	+	0	ID=cds-WP_001076044.1;Parent=gene-AC56_RS05475;Dbxref=GenBank:WP_001076044.1;Name=WP_001076044.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspH;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417788.1;locus_tag=AC56_RS05475;product=type II secretion system minor pseudopilin GspH;protein_id=WP_001076044.1;transl_table=11
NZ_JJLS01000259.1	RefSeq	gene	6602	6979	.	+	.	ID=gene-AC56_RS05470;Name=gspI;gbkey=Gene;gene=gspI;gene_biotype=protein_coding;locus_tag=AC56_RS05470;old_locus_tag=AC56_3707
NZ_JJLS01000259.1	Protein Homology	CDS	6602	6979	.	+	0	ID=cds-WP_001041743.1;Parent=gene-AC56_RS05470;Dbxref=GenBank:WP_001041743.1;Name=WP_001041743.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspI;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417789.4;locus_tag=AC56_RS05470;product=type II secretion system minor pseudopilin GspI;protein_id=WP_001041743.1;transl_table=11
NZ_JJLS01000259.1	RefSeq	gene	6972	7559	.	+	.	ID=gene-AC56_RS05465;Name=gspJ;gbkey=Gene;gene=gspJ;gene_biotype=protein_coding;locus_tag=AC56_RS05465;old_locus_tag=AC56_3708
NZ_JJLS01000259.1	Protein Homology	CDS	6972	7559	.	+	0	ID=cds-WP_000610634.1;Parent=gene-AC56_RS05465;Dbxref=GenBank:WP_000610634.1;Name=WP_000610634.1;gbkey=CDS;gene=gspJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417790.1;locus_tag=AC56_RS05465;product=type II secretion system minor pseudopilin GspJ;protein_id=WP_000610634.1;transl_table=11
NZ_JJLS01000259.1	RefSeq	gene	7552	8535	.	+	.	ID=gene-AC56_RS05460;Name=gspK;gbkey=Gene;gene=gspK;gene_biotype=protein_coding;locus_tag=AC56_RS05460;old_locus_tag=AC56_3709
NZ_JJLS01000259.1	Protein Homology	CDS	7552	8535	.	+	0	ID=cds-WP_001058522.1;Parent=gene-AC56_RS05460;Dbxref=GenBank:WP_001058522.1;Name=WP_001058522.1;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=gspK;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417791.1;locus_tag=AC56_RS05460;product=type II secretion system minor pseudopilin GspK;protein_id=WP_001058522.1;transl_table=11
NZ_JJLS01000259.1	RefSeq	gene	8550	9713	.	+	.	ID=gene-AC56_RS05455;Name=gspL;gbkey=Gene;gene=gspL;gene_biotype=protein_coding;locus_tag=AC56_RS05455;old_locus_tag=AC56_3710
NZ_JJLS01000259.1	Protein Homology	CDS	8550	9713	.	+	0	ID=cds-WP_001115235.1;Parent=gene-AC56_RS05455;Dbxref=GenBank:WP_001115235.1;Name=WP_001115235.1;Ontology_term=GO:0015628,GO:0009276,GO:0015627;gbkey=CDS;gene=gspL;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417792.2;locus_tag=AC56_RS05455;product=type II secretion system protein GspL;protein_id=WP_001115235.1;transl_table=11
NZ_JJLS01000259.1	RefSeq	gene	9710	10171	.	+	.	ID=gene-AC56_RS05450;Name=gspM;gbkey=Gene;gene=gspM;gene_biotype=protein_coding;locus_tag=AC56_RS05450;old_locus_tag=AC56_3711
NZ_JJLS01000259.1	Protein Homology	CDS	9710	10171	.	+	0	ID=cds-WP_001295161.1;Parent=gene-AC56_RS05450;Dbxref=GenBank:WP_001295161.1;Name=WP_001295161.1;gbkey=CDS;gene=gspM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417793.2;locus_tag=AC56_RS05450;product=type II secretion system protein GspM;protein_id=WP_001295161.1;transl_table=11
NZ_JJLS01000259.1	RefSeq	gene	10171	10848	.	+	.	ID=gene-AC56_RS05445;Name=gspO;gbkey=Gene;gene=gspO;gene_biotype=protein_coding;locus_tag=AC56_RS05445;old_locus_tag=AC56_3712
NZ_JJLS01000259.1	Protein Homology	CDS	10171	10848	.	+	0	ID=cds-WP_000178161.1;Parent=gene-AC56_RS05445;Dbxref=GenBank:WP_000178161.1;Name=WP_000178161.1;gbkey=CDS;gene=gspO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417794.1;locus_tag=AC56_RS05445;product=prepilin peptidase GspO;protein_id=WP_000178161.1;transl_table=11
NZ_JJLS01000259.1	RefSeq	gene	10877	11353	.	-	.	ID=gene-AC56_RS05440;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=AC56_RS05440;old_locus_tag=AC56_3713
NZ_JJLS01000259.1	Protein Homology	CDS	10877	11353	.	-	0	ID=cds-WP_000675504.1;Parent=gene-AC56_RS05440;Dbxref=GenBank:WP_000675504.1;Name=WP_000675504.1;Ontology_term=GO:0006879,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417795.1;locus_tag=AC56_RS05440;product=bacterioferritin;protein_id=WP_000675504.1;transl_table=11
NZ_JJLS01000259.1	RefSeq	gene	11425	11619	.	-	.	ID=gene-AC56_RS05435;Name=bfd;gbkey=Gene;gene=bfd;gene_biotype=protein_coding;locus_tag=AC56_RS05435;old_locus_tag=AC56_3714
NZ_JJLS01000259.1	Protein Homology	CDS	11425	11619	.	-	0	ID=cds-WP_000289085.1;Parent=gene-AC56_RS05435;Dbxref=GenBank:WP_000289085.1;Name=WP_000289085.1;gbkey=CDS;gene=bfd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417796.1;locus_tag=AC56_RS05435;product=bacterioferritin-associated ferredoxin;protein_id=WP_000289085.1;transl_table=11
NZ_JJLS01000259.1	RefSeq	gene	11788	14481	.	-	.	ID=gene-AC56_RS05430;Name=chiA;gbkey=Gene;gene=chiA;gene_biotype=protein_coding;locus_tag=AC56_RS05430;old_locus_tag=AC56_3715
NZ_JJLS01000259.1	Protein Homology	CDS	11788	14481	.	-	0	ID=cds-WP_032279025.1;Parent=gene-AC56_RS05430;Dbxref=GenBank:WP_032279025.1;Name=WP_032279025.1;gbkey=CDS;gene=chiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417797.1;locus_tag=AC56_RS05430;product=bifunctional chitinase/lysozyme;protein_id=WP_032279025.1;transl_table=11
NZ_JJLS01000259.1	RefSeq	gene	14773	15360	.	-	.	ID=gene-AC56_RS05425;Name=AC56_RS05425;end_range=15360,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS05425;old_locus_tag=AC56_3716;partial=true
NZ_JJLS01000259.1	Protein Homology	CDS	14773	15360	.	-	0	ID=cds-WP_019842912.1;Parent=gene-AC56_RS05425;Dbxref=GenBank:WP_019842912.1;Name=WP_019842912.1;Ontology_term=GO:0005525;end_range=15360,.;gbkey=CDS;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=AC56_RS05425;partial=true;product=EF-Tu/IF-2/RF-3 family GTPase;protein_id=WP_019842912.1;transl_table=11
##sequence-region NZ_JJLS01000260.1 1 27790
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000260.1	RefSeq	region	1	27790	.	+	.	ID=NZ_JJLS01000260.1:1..27790;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000260.1	RefSeq	gene	33	845	.	-	.	ID=gene-AC56_RS05420;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=AC56_RS05420;old_locus_tag=AC56_3717
NZ_JJLS01000260.1	Protein Homology	CDS	33	845	.	-	0	ID=cds-WP_000838261.1-2;Parent=gene-AC56_RS05420;Dbxref=GenBank:WP_000838261.1;Name=WP_000838261.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;gene=fkpA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312225.1;locus_tag=AC56_RS05420;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000838261.1;transl_table=11
NZ_JJLS01000260.1	RefSeq	gene	1066	1284	.	+	.	ID=gene-AC56_RS05415;Name=slyX;gbkey=Gene;gene=slyX;gene_biotype=protein_coding;locus_tag=AC56_RS05415;old_locus_tag=AC56_3718
NZ_JJLS01000260.1	Protein Homology	CDS	1066	1284	.	+	0	ID=cds-WP_001153619.1;Parent=gene-AC56_RS05415;Dbxref=GenBank:WP_001153619.1;Name=WP_001153619.1;gbkey=CDS;gene=slyX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312226.1;locus_tag=AC56_RS05415;product=protein SlyX;protein_id=WP_001153619.1;transl_table=11
NZ_JJLS01000260.1	RefSeq	gene	1333	1923	.	-	.	ID=gene-AC56_RS05410;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=AC56_RS05410;old_locus_tag=AC56_3719
NZ_JJLS01000260.1	Protein Homology	CDS	1333	1923	.	-	0	ID=cds-WP_000861334.1;Parent=gene-AC56_RS05410;Dbxref=GenBank:WP_000861334.1;Name=WP_000861334.1;Ontology_term=GO:0003755;gbkey=CDS;gene=slyD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312227.1;locus_tag=AC56_RS05410;product=peptidylprolyl isomerase;protein_id=WP_000861334.1;transl_table=11
NZ_JJLS01000260.1	RefSeq	gene	2018	2218	.	-	.	ID=gene-AC56_RS05405;Name=yheV;gbkey=Gene;gene=yheV;gene_biotype=protein_coding;locus_tag=AC56_RS05405;old_locus_tag=AC56_3720
NZ_JJLS01000260.1	Protein Homology	CDS	2018	2218	.	-	0	ID=cds-WP_001007730.1;Parent=gene-AC56_RS05405;Dbxref=GenBank:WP_001007730.1;Name=WP_001007730.1;gbkey=CDS;gene=yheV;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588468.1;locus_tag=AC56_RS05405;product=YheV family putative zinc ribbon protein;protein_id=WP_001007730.1;transl_table=11
NZ_JJLS01000260.1	RefSeq	gene	2228	4033	.	-	.	ID=gene-AC56_RS05400;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=protein_coding;locus_tag=AC56_RS05400;old_locus_tag=AC56_3721
NZ_JJLS01000260.1	Protein Homology	CDS	2228	4033	.	-	0	ID=cds-WP_000399122.1;Parent=gene-AC56_RS05400;Dbxref=GenBank:WP_000399122.1;Name=WP_000399122.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefB;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417809.1;locus_tag=AC56_RS05400;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=WP_000399122.1;transl_table=11
NZ_JJLS01000260.1	RefSeq	gene	4033	4584	.	-	.	ID=gene-AC56_RS05395;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=protein_coding;locus_tag=AC56_RS05395;old_locus_tag=AC56_3722
NZ_JJLS01000260.1	Protein Homology	CDS	4033	4584	.	-	0	ID=cds-WP_032279041.1;Parent=gene-AC56_RS05395;Dbxref=GenBank:WP_032279041.1;Name=WP_032279041.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefG;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312229.2;locus_tag=AC56_RS05395;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WP_032279041.1;transl_table=11
NZ_JJLS01000260.1	RefSeq	gene	4715	6628	.	+	.	ID=gene-AC56_RS05390;Name=yheS;gbkey=Gene;gene=yheS;gene_biotype=protein_coding;locus_tag=AC56_RS05390;old_locus_tag=AC56_3723
NZ_JJLS01000260.1	Protein Homology	CDS	4715	6628	.	+	0	ID=cds-WP_032279032.1;Parent=gene-AC56_RS05390;Dbxref=GenBank:WP_032279032.1;Name=WP_032279032.1;Ontology_term=GO:0005524;gbkey=CDS;gene=yheS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312230.1;locus_tag=AC56_RS05390;product=ABC transporter ATP-binding protein;protein_id=WP_032279032.1;transl_table=11
NZ_JJLS01000260.1	RefSeq	gene	6628	7650	.	+	.	ID=gene-AC56_RS05385;Name=yheT;gbkey=Gene;gene=yheT;gene_biotype=protein_coding;locus_tag=AC56_RS05385;old_locus_tag=AC56_3724
NZ_JJLS01000260.1	Protein Homology	CDS	6628	7650	.	+	0	ID=cds-WP_000057356.1;Parent=gene-AC56_RS05385;Dbxref=GenBank:WP_000057356.1;Name=WP_000057356.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yheT;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417812.1;locus_tag=AC56_RS05385;product=hydrolase;protein_id=WP_000057356.1;transl_table=11
NZ_JJLS01000260.1	RefSeq	gene	7644	7862	.	+	.	ID=gene-AC56_RS05380;Name=yheU;gbkey=Gene;gene=yheU;gene_biotype=protein_coding;locus_tag=AC56_RS05380;old_locus_tag=AC56_3725
NZ_JJLS01000260.1	Protein Homology	CDS	7644	7862	.	+	0	ID=cds-WP_000907085.1;Parent=gene-AC56_RS05380;Dbxref=GenBank:WP_000907085.1;Name=WP_000907085.1;gbkey=CDS;gene=yheU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312232.1;locus_tag=AC56_RS05380;product=YheU family protein;protein_id=WP_000907085.1;transl_table=11
NZ_JJLS01000260.1	RefSeq	gene	7916	8785	.	+	.	ID=gene-AC56_RS05375;Name=prkB;gbkey=Gene;gene=prkB;gene_biotype=protein_coding;locus_tag=AC56_RS05375;old_locus_tag=AC56_3726
NZ_JJLS01000260.1	Protein Homology	CDS	7916	8785	.	+	0	ID=cds-WP_001274680.1;Parent=gene-AC56_RS05375;Dbxref=GenBank:WP_001274680.1;Name=WP_001274680.1;Ontology_term=GO:0005975,GO:0005524,GO:0008974;gbkey=CDS;gene=prkB;go_function=ATP binding|0005524||IEA,phosphoribulokinase activity|0008974||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417814.1;locus_tag=AC56_RS05375;product=phosphoribulokinase;protein_id=WP_001274680.1;transl_table=11
NZ_JJLS01000260.1	RefSeq	gene	8840	9244	.	-	.	ID=gene-AC56_RS05370;Name=yhfA;gbkey=Gene;gene=yhfA;gene_biotype=protein_coding;locus_tag=AC56_RS05370;old_locus_tag=AC56_3727
NZ_JJLS01000260.1	Protein Homology	CDS	8840	9244	.	-	0	ID=cds-WP_001148908.1;Parent=gene-AC56_RS05370;Dbxref=GenBank:WP_001148908.1;Name=WP_001148908.1;gbkey=CDS;gene=yhfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312234.1;locus_tag=AC56_RS05370;product=OsmC family protein;protein_id=WP_001148908.1;transl_table=11
NZ_JJLS01000260.1	RefSeq	gene	9546	10178	.	+	.	ID=gene-AC56_RS05365;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=AC56_RS05365;old_locus_tag=AC56_3728
NZ_JJLS01000260.1	Protein Homology	CDS	9546	10178	.	+	0	ID=cds-WP_000242755.1;Parent=gene-AC56_RS05365;Dbxref=GenBank:WP_000242755.1;Name=WP_000242755.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312235.1;locus_tag=AC56_RS05365;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_000242755.1;transl_table=11
NZ_JJLS01000260.1	RefSeq	gene	10229	12319	.	+	.	ID=gene-AC56_RS05360;Name=yhfK;gbkey=Gene;gene=yhfK;gene_biotype=protein_coding;locus_tag=AC56_RS05360;old_locus_tag=AC56_3729
NZ_JJLS01000260.1	Protein Homology	CDS	10229	12319	.	+	0	ID=cds-WP_001295162.1;Parent=gene-AC56_RS05360;Dbxref=GenBank:WP_001295162.1;Name=WP_001295162.1;gbkey=CDS;gene=yhfK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312236.3;locus_tag=AC56_RS05360;product=YccS/YhfK family putative transporter;protein_id=WP_001295162.1;transl_table=11
NZ_JJLS01000260.1	RefSeq	gene	12386	13606	.	-	.	ID=gene-AC56_RS05355;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;gene_synonym=dapC;locus_tag=AC56_RS05355;old_locus_tag=AC56_3730
NZ_JJLS01000260.1	Protein Homology	CDS	12386	13606	.	-	0	ID=cds-WP_000963792.1;Parent=gene-AC56_RS05355;Dbxref=GenBank:WP_000963792.1;Name=WP_000963792.1;gbkey=CDS;gene=argD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417818.1;locus_tag=AC56_RS05355;product=bifunctional acetylornithine/succinyldiaminopimelate transaminase;protein_id=WP_000963792.1;transl_table=11
NZ_JJLS01000260.1	RefSeq	gene	13692	14255	.	-	.	ID=gene-AC56_RS05350;Name=pabA;gbkey=Gene;gene=pabA;gene_biotype=protein_coding;locus_tag=AC56_RS05350;old_locus_tag=AC56_3731
NZ_JJLS01000260.1	Protein Homology	CDS	13692	14255	.	-	0	ID=cds-WP_000601847.1;Parent=gene-AC56_RS05350;Dbxref=GenBank:WP_000601847.1;Name=WP_000601847.1;gbkey=CDS;gene=pabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417819.1;locus_tag=AC56_RS05350;product=aminodeoxychorismate synthase component 2;protein_id=WP_000601847.1;transl_table=11
NZ_JJLS01000260.1	RefSeq	gene	14287	14889	.	-	.	ID=gene-AC56_RS05345;Name=fic;gbkey=Gene;gene=fic;gene_biotype=protein_coding;locus_tag=AC56_RS05345;old_locus_tag=AC56_3732
NZ_JJLS01000260.1	Protein Homology	CDS	14287	14889	.	-	0	ID=cds-WP_001280624.1;Parent=gene-AC56_RS05345;Dbxref=GenBank:WP_001280624.1;Name=WP_001280624.1;gbkey=CDS;gene=fic;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417820.1;locus_tag=AC56_RS05345;product=putative adenosine monophosphate-protein transferase Fic;protein_id=WP_001280624.1;transl_table=11
NZ_JJLS01000260.1	RefSeq	gene	14879	15046	.	-	.	ID=gene-AC56_RS0127075;Name=yhfG;gbkey=Gene;gene=yhfG;gene_biotype=protein_coding;locus_tag=AC56_RS0127075
NZ_JJLS01000260.1	Protein Homology	CDS	14879	15046	.	-	0	ID=cds-WP_032279039.1;Parent=gene-AC56_RS0127075;Dbxref=GenBank:WP_032279039.1;Name=WP_032279039.1;gbkey=CDS;gene=yhfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709137.1;locus_tag=AC56_RS0127075;product=YhfG family protein;protein_id=WP_032279039.1;transl_table=11
NZ_JJLS01000260.1	RefSeq	gene	15151	15723	.	-	.	ID=gene-AC56_RS05340;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;gene_synonym=rotA;locus_tag=AC56_RS05340;old_locus_tag=AC56_3733
NZ_JJLS01000260.1	Protein Homology	CDS	15151	15723	.	-	0	ID=cds-WP_000477225.1;Parent=gene-AC56_RS05340;Dbxref=GenBank:WP_000477225.1;Name=WP_000477225.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312241.1;locus_tag=AC56_RS05340;product=peptidylprolyl isomerase A;protein_id=WP_000477225.1;transl_table=11
NZ_JJLS01000260.1	RefSeq	gene	15994	17175	.	+	.	ID=gene-AC56_RS05335;Name=tsgA;gbkey=Gene;gene=tsgA;gene_biotype=protein_coding;locus_tag=AC56_RS05335;old_locus_tag=AC56_3735
NZ_JJLS01000260.1	Protein Homology	CDS	15994	17175	.	+	0	ID=cds-WP_000185258.1;Parent=gene-AC56_RS05335;Dbxref=GenBank:WP_000185258.1;Name=WP_000185258.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=tsgA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417823.1;locus_tag=AC56_RS05335;product=MFS transporter TsgA;protein_id=WP_000185258.1;transl_table=11
NZ_JJLS01000260.1	RefSeq	gene	17437	19980	.	+	.	ID=gene-AC56_RS05330;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=AC56_RS05330;old_locus_tag=AC56_3737
NZ_JJLS01000260.1	Protein Homology	CDS	17437	19980	.	+	0	ID=cds-WP_000049213.1;Parent=gene-AC56_RS05330;Dbxref=GenBank:WP_000049213.1;Name=WP_000049213.1;gbkey=CDS;gene=nirB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709140.2;locus_tag=AC56_RS05330;product=NADPH-nitrite reductase large subunit;protein_id=WP_000049213.1;transl_table=11
NZ_JJLS01000260.1	RefSeq	gene	19977	20303	.	+	.	ID=gene-AC56_RS05325;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=AC56_RS05325;old_locus_tag=AC56_3738
NZ_JJLS01000260.1	Protein Homology	CDS	19977	20303	.	+	0	ID=cds-WP_000084764.1;Parent=gene-AC56_RS05325;Dbxref=GenBank:WP_000084764.1;Name=WP_000084764.1;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312244.1;locus_tag=AC56_RS05325;product=nitrite reductase small subunit NirD;protein_id=WP_000084764.1;transl_table=11
NZ_JJLS01000260.1	RefSeq	gene	20430	21236	.	+	.	ID=gene-AC56_RS05320;Name=nirC;gbkey=Gene;gene=nirC;gene_biotype=protein_coding;locus_tag=AC56_RS05320;old_locus_tag=AC56_3739
NZ_JJLS01000260.1	Protein Homology	CDS	20430	21236	.	+	0	ID=cds-WP_001364262.1;Parent=gene-AC56_RS05320;Dbxref=GenBank:WP_001364262.1;Name=WP_001364262.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=nirC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026212.2;locus_tag=AC56_RS05320;product=nitrite transporter NirC;protein_id=WP_001364262.1;transl_table=11
NZ_JJLS01000260.1	RefSeq	gene	21255	22628	.	+	.	ID=gene-AC56_RS05315;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=AC56_RS05315;old_locus_tag=AC56_3740
NZ_JJLS01000260.1	Protein Homology	CDS	21255	22628	.	+	0	ID=cds-WP_032279040.1;Parent=gene-AC56_RS05315;Dbxref=GenBank:WP_032279040.1;Name=WP_032279040.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312246.1;locus_tag=AC56_RS05315;product=siroheme synthase CysG;protein_id=WP_032279040.1;transl_table=11
NZ_JJLS01000260.1	RefSeq	gene	22728	23425	.	-	.	ID=gene-AC56_RS05310;Name=AC56_RS05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS05310;old_locus_tag=AC56_3741
NZ_JJLS01000260.1	Protein Homology	CDS	23176	23425	.	-	0	ID=cds-WP_103215986.1-2;Parent=gene-AC56_RS05310;Dbxref=GenBank:WP_103215986.1;Name=WP_103215986.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS05310;product=IS1-like element IS1A family transposase;protein_id=WP_103215986.1;transl_table=11
NZ_JJLS01000260.1	Protein Homology	CDS	22728	23176	.	-	2	ID=cds-WP_103215986.1-2;Parent=gene-AC56_RS05310;Dbxref=GenBank:WP_103215986.1;Name=WP_103215986.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS05310;product=IS1-like element IS1A family transposase;protein_id=WP_103215986.1;transl_table=11
NZ_JJLS01000260.1	RefSeq	pseudogene	23481	24032	.	+	.	ID=gene-AC56_RS05305;Name=AC56_RS05305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS05305;old_locus_tag=AC56_3742;partial=true;pseudo=true;start_range=.,23481
NZ_JJLS01000260.1	Protein Homology	CDS	23481	24032	.	+	0	ID=cds-AC56_RS05305;Parent=gene-AC56_RS05305;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416205.1;locus_tag=AC56_RS05305;partial=true;product=MFS transporter;pseudo=true;start_range=.,23481;transl_table=11
NZ_JJLS01000260.1	RefSeq	gene	24259	25524	.	+	.	ID=gene-AC56_RS05300;Name=AC56_RS05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS05300;old_locus_tag=AC56_3743
NZ_JJLS01000260.1	Protein Homology	CDS	24259	25524	.	+	0	ID=cds-WP_001297389.1-5;Parent=gene-AC56_RS05300;Dbxref=GenBank:WP_001297389.1;Name=WP_001297389.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310425.2;locus_tag=AC56_RS05300;product=MFS transporter;protein_id=WP_001297389.1;transl_table=11
NZ_JJLS01000260.1	RefSeq	gene	25536	26402	.	+	.	ID=gene-AC56_RS05295;Name=ydiB;gbkey=Gene;gene=ydiB;gene_biotype=protein_coding;locus_tag=AC56_RS05295;old_locus_tag=AC56_3744
NZ_JJLS01000260.1	Protein Homology	CDS	25536	26402	.	+	0	ID=cds-WP_032278339.1-5;Parent=gene-AC56_RS05295;Dbxref=GenBank:WP_032278339.1;Name=WP_032278339.1;gbkey=CDS;gene=ydiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416207.1;locus_tag=AC56_RS05295;product=quinate/shikimate dehydrogenase;protein_id=WP_032278339.1;transl_table=11
NZ_JJLS01000260.1	RefSeq	gene	26433	27191	.	+	.	ID=gene-AC56_RS05290;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=AC56_RS05290;old_locus_tag=AC56_3745
NZ_JJLS01000260.1	Protein Homology	CDS	26433	27191	.	+	0	ID=cds-WP_016242173.1-5;Parent=gene-AC56_RS05290;Dbxref=GenBank:WP_016242173.1;Name=WP_016242173.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416208.1;locus_tag=AC56_RS05290;product=type I 3-dehydroquinate dehydratase;protein_id=WP_016242173.1;transl_table=11
NZ_JJLS01000260.1	RefSeq	pseudogene	27334	27624	.	+	.	ID=gene-AC56_RS05285;Name=AC56_RS05285;end_range=27624,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS05285;old_locus_tag=AC56_3747;partial=true;pseudo=true
NZ_JJLS01000260.1	Protein Homology	CDS	27334	27624	.	+	0	ID=cds-AC56_RS05285;Parent=gene-AC56_RS05285;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0008410;end_range=27624,.;gbkey=CDS;go_function=CoA-transferase activity|0008410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310428.1;locus_tag=AC56_RS05285;partial=true;product=CoA-transferase;pseudo=true;transl_table=11
NZ_JJLS01000260.1	RefSeq	pseudogene	27656	27790	.	+	.	ID=gene-AC56_RS32820;Name=AC56_RS32820;end_range=27790,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS32820;old_locus_tag=AC56_3748;partial=true;pseudo=true
NZ_JJLS01000260.1	Protein Homology	CDS	27656	27790	.	+	0	ID=cds-AC56_RS32820;Parent=gene-AC56_RS32820;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=27790,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS32820;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000261.1 1 44157
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000261.1	RefSeq	region	1	44157	.	+	.	ID=NZ_JJLS01000261.1:1..44157;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000261.1	RefSeq	pseudogene	1	476	.	-	.	ID=gene-AC56_RS31615;Name=AC56_RS31615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS31615;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000261.1	Protein Homology	CDS	1	476	.	-	0	ID=cds-AC56_RS31615;Parent=gene-AC56_RS31615;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS31615;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000261.1	RefSeq	pseudogene	511	669	.	-	.	ID=gene-AC56_RS30210;Name=AC56_RS30210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS30210;old_locus_tag=AC56_3750;partial=true;pseudo=true;start_range=.,511
NZ_JJLS01000261.1	Protein Homology	CDS	511	669	.	-	0	ID=cds-AC56_RS30210;Parent=gene-AC56_RS30210;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026214.1;locus_tag=AC56_RS30210;partial=true;product=GntR family transcriptional regulator YhfZ;pseudo=true;start_range=.,511;transl_table=11
NZ_JJLS01000261.1	RefSeq	gene	959	1963	.	-	.	ID=gene-AC56_RS05275;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=AC56_RS05275;old_locus_tag=AC56_3752
NZ_JJLS01000261.1	Protein Homology	CDS	959	1963	.	-	0	ID=cds-WP_000165552.1-2;Parent=gene-AC56_RS05275;Dbxref=GenBank:WP_000165552.1;Name=WP_000165552.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417843.1;locus_tag=AC56_RS05275;product=tryptophan--tRNA ligase;protein_id=WP_000165552.1;transl_table=11
NZ_JJLS01000261.1	RefSeq	gene	1956	2714	.	-	.	ID=gene-AC56_RS05270;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=AC56_RS05270;old_locus_tag=AC56_3753
NZ_JJLS01000261.1	Protein Homology	CDS	1956	2714	.	-	0	ID=cds-WP_000032691.1;Parent=gene-AC56_RS05270;Dbxref=GenBank:WP_000032691.1;Name=WP_000032691.1;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;gene=gph;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312254.1;locus_tag=AC56_RS05270;product=phosphoglycolate phosphatase;protein_id=WP_000032691.1;transl_table=11
NZ_JJLS01000261.1	RefSeq	gene	2707	3384	.	-	.	ID=gene-AC56_RS05265;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=AC56_RS05265;old_locus_tag=AC56_3754
NZ_JJLS01000261.1	Protein Homology	CDS	2707	3384	.	-	0	ID=cds-WP_000816280.1;Parent=gene-AC56_RS05265;Dbxref=GenBank:WP_000816280.1;Name=WP_000816280.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312255.1;locus_tag=AC56_RS05265;product=ribulose-phosphate 3-epimerase;protein_id=WP_000816280.1;transl_table=11
NZ_JJLS01000261.1	RefSeq	gene	3402	4238	.	-	.	ID=gene-AC56_RS05260;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=AC56_RS05260;old_locus_tag=AC56_3755
NZ_JJLS01000261.1	Protein Homology	CDS	3402	4238	.	-	0	ID=cds-WP_000742141.1;Parent=gene-AC56_RS05260;Dbxref=GenBank:WP_000742141.1;Name=WP_000742141.1;Ontology_term=GO:0003676,GO:0009007;gbkey=CDS;gene=dam;go_function=nucleic acid binding|0003676||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312256.1;locus_tag=AC56_RS05260;product=adenine-specific DNA-methyltransferase;protein_id=WP_000742141.1;transl_table=11
NZ_JJLS01000261.1	RefSeq	gene	4345	5631	.	-	.	ID=gene-AC56_RS05255;Name=damX;gbkey=Gene;gene=damX;gene_biotype=protein_coding;locus_tag=AC56_RS05255;old_locus_tag=AC56_3756
NZ_JJLS01000261.1	Protein Homology	CDS	4345	5631	.	-	0	ID=cds-WP_000343195.1;Parent=gene-AC56_RS05255;Dbxref=GenBank:WP_000343195.1;Name=WP_000343195.1;Ontology_term=GO:0032506,GO:0042834;gbkey=CDS;gene=damX;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312257.1;locus_tag=AC56_RS05255;product=cell division protein DamX;protein_id=WP_000343195.1;transl_table=11
NZ_JJLS01000261.1	RefSeq	gene	5723	6811	.	-	.	ID=gene-AC56_RS05250;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=AC56_RS05250;old_locus_tag=AC56_3757
NZ_JJLS01000261.1	Protein Homology	CDS	5723	6811	.	-	0	ID=cds-WP_000439850.1;Parent=gene-AC56_RS05250;Dbxref=GenBank:WP_000439850.1;Name=WP_000439850.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312258.1;locus_tag=AC56_RS05250;product=3-dehydroquinate synthase;protein_id=WP_000439850.1;transl_table=11
NZ_JJLS01000261.1	RefSeq	gene	6868	7389	.	-	.	ID=gene-AC56_RS05245;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=AC56_RS05245;old_locus_tag=AC56_3758
NZ_JJLS01000261.1	Protein Homology	CDS	6868	7389	.	-	0	ID=cds-WP_000818618.1;Parent=gene-AC56_RS05245;Dbxref=GenBank:WP_000818618.1;Name=WP_000818618.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1;locus_tag=AC56_RS05245;product=shikimate kinase AroK;protein_id=WP_000818618.1;transl_table=11
NZ_JJLS01000261.1	RefSeq	gene	7790	9028	.	-	.	ID=gene-AC56_RS05240;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=protein_coding;locus_tag=AC56_RS05240;old_locus_tag=AC56_3759
NZ_JJLS01000261.1	Protein Homology	CDS	7790	9028	.	-	0	ID=cds-WP_071998969.1;Parent=gene-AC56_RS05240;Dbxref=GenBank:WP_071998969.1;Name=WP_071998969.1;Ontology_term=GO:0009306,GO:0019867;gbkey=CDS;gene=hofQ;go_component=outer membrane|0019867||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417850.1;locus_tag=AC56_RS05240;product=DNA uptake porin HofQ;protein_id=WP_071998969.1;transl_table=11
NZ_JJLS01000261.1	RefSeq	gene	8940	9344	.	-	.	ID=gene-AC56_RS05235;Name=hofP;gbkey=Gene;gene=hofP;gene_biotype=protein_coding;locus_tag=AC56_RS05235;old_locus_tag=AC56_3760
NZ_JJLS01000261.1	Protein Homology	CDS	8940	9344	.	-	0	ID=cds-WP_001338740.1;Parent=gene-AC56_RS05235;Dbxref=GenBank:WP_001338740.1;Name=WP_001338740.1;gbkey=CDS;gene=hofP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417851.4;locus_tag=AC56_RS05235;product=DNA utilization protein HofP;protein_id=WP_001338740.1;transl_table=11
NZ_JJLS01000261.1	RefSeq	gene	9334	9774	.	-	.	ID=gene-AC56_RS05230;Name=hofO;gbkey=Gene;gene=hofO;gene_biotype=protein_coding;locus_tag=AC56_RS05230;old_locus_tag=AC56_3761
NZ_JJLS01000261.1	Protein Homology	CDS	9334	9774	.	-	0	ID=cds-WP_001055768.1;Parent=gene-AC56_RS05230;Dbxref=GenBank:WP_001055768.1;Name=WP_001055768.1;gbkey=CDS;gene=hofO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417852.1;locus_tag=AC56_RS05230;product=DNA utilization protein HofO;protein_id=WP_001055768.1;transl_table=11
NZ_JJLS01000261.1	RefSeq	gene	9758	10297	.	-	.	ID=gene-AC56_RS05225;Name=hofN;gbkey=Gene;gene=hofN;gene_biotype=protein_coding;locus_tag=AC56_RS05225;old_locus_tag=AC56_3762
NZ_JJLS01000261.1	Protein Homology	CDS	9758	10297	.	-	0	ID=cds-WP_001069320.1;Parent=gene-AC56_RS05225;Dbxref=GenBank:WP_001069320.1;Name=WP_001069320.1;gbkey=CDS;gene=hofN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417853.1;locus_tag=AC56_RS05225;product=DNA utilization protein HofN;protein_id=WP_001069320.1;transl_table=11
NZ_JJLS01000261.1	RefSeq	gene	10297	11076	.	-	.	ID=gene-AC56_RS05220;Name=hofM;gbkey=Gene;gene=hofM;gene_biotype=protein_coding;locus_tag=AC56_RS05220;old_locus_tag=AC56_3763
NZ_JJLS01000261.1	Protein Homology	CDS	10297	11076	.	-	0	ID=cds-WP_032279044.1;Parent=gene-AC56_RS05220;Dbxref=GenBank:WP_032279044.1;Name=WP_032279044.1;gbkey=CDS;gene=hofM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417854.4;locus_tag=AC56_RS05220;product=DNA utilization protein HofM;protein_id=WP_032279044.1;transl_table=11
NZ_JJLS01000261.1	RefSeq	gene	11196	13748	.	+	.	ID=gene-AC56_RS05215;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=AC56_RS05215;old_locus_tag=AC56_3764
NZ_JJLS01000261.1	Protein Homology	CDS	11196	13748	.	+	0	ID=cds-WP_001300707.1;Parent=gene-AC56_RS05215;Dbxref=GenBank:WP_001300707.1;Name=WP_001300707.1;Ontology_term=GO:0008658;gbkey=CDS;gene=mrcA;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312265.2;locus_tag=AC56_RS05215;product=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;protein_id=WP_001300707.1;transl_table=11
NZ_JJLS01000261.1	RefSeq	gene	13914	14474	.	-	.	ID=gene-AC56_RS05210;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=AC56_RS05210;old_locus_tag=AC56_3765
NZ_JJLS01000261.1	Protein Homology	CDS	13914	14474	.	-	0	ID=cds-WP_000045744.1;Parent=gene-AC56_RS05210;Dbxref=GenBank:WP_000045744.1;Name=WP_000045744.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417856.1;locus_tag=AC56_RS05210;product=ADP compounds hydrolase NudE;protein_id=WP_000045744.1;transl_table=11
NZ_JJLS01000261.1	RefSeq	gene	14794	16929	.	+	.	ID=gene-AC56_RS05205;Name=igaA;gbkey=Gene;gene=igaA;gene_biotype=protein_coding;locus_tag=AC56_RS05205;old_locus_tag=AC56_3766
NZ_JJLS01000261.1	Protein Homology	CDS	14794	16929	.	+	0	ID=cds-WP_000104533.1;Parent=gene-AC56_RS05205;Dbxref=GenBank:WP_000104533.1;Name=WP_000104533.1;gbkey=CDS;gene=igaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417857.1;locus_tag=AC56_RS05205;product=intracellular growth attenuator protein IgaA;protein_id=WP_000104533.1;transl_table=11
NZ_JJLS01000261.1	RefSeq	gene	16994	17662	.	+	.	ID=gene-AC56_RS05200;Name=yrfG;gbkey=Gene;gene=yrfG;gene_biotype=protein_coding;locus_tag=AC56_RS05200;old_locus_tag=AC56_3767
NZ_JJLS01000261.1	Protein Homology	CDS	16994	17662	.	+	0	ID=cds-WP_001295168.1;Parent=gene-AC56_RS05200;Dbxref=GenBank:WP_001295168.1;Name=WP_001295168.1;gbkey=CDS;gene=yrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312268.2;locus_tag=AC56_RS05200;product=GMP/IMP nucleotidase;protein_id=WP_001295168.1;transl_table=11
NZ_JJLS01000261.1	RefSeq	gene	17673	18074	.	+	.	ID=gene-AC56_RS05195;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=AC56_RS05195;old_locus_tag=AC56_3768
NZ_JJLS01000261.1	Protein Homology	CDS	17673	18074	.	+	0	ID=cds-WP_000660483.1;Parent=gene-AC56_RS05195;Dbxref=GenBank:WP_000660483.1;Name=WP_000660483.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312269.1;locus_tag=AC56_RS05195;product=ribosome-associated heat shock protein Hsp15;protein_id=WP_000660483.1;transl_table=11
NZ_JJLS01000261.1	RefSeq	gene	18099	18977	.	+	.	ID=gene-AC56_RS05190;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=AC56_RS05190;old_locus_tag=AC56_3769
NZ_JJLS01000261.1	Protein Homology	CDS	18099	18977	.	+	0	ID=cds-WP_001135574.1;Parent=gene-AC56_RS05190;Dbxref=GenBank:WP_001135574.1;Name=WP_001135574.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417860.2;locus_tag=AC56_RS05190;product=Hsp33 family molecular chaperone HslO;protein_id=WP_001135574.1;transl_table=11
NZ_JJLS01000261.1	RefSeq	gene	19040	20764	.	-	.	ID=gene-AC56_RS05185;Name=yhgE;gbkey=Gene;gene=yhgE;gene_biotype=protein_coding;locus_tag=AC56_RS05185;old_locus_tag=AC56_3770
NZ_JJLS01000261.1	Protein Homology	CDS	19040	20764	.	-	0	ID=cds-WP_032279046.1;Parent=gene-AC56_RS05185;Dbxref=GenBank:WP_032279046.1;Name=WP_032279046.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yhgE;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312271.1;locus_tag=AC56_RS05185;product=DUF4153 domain-containing protein;protein_id=WP_032279046.1;transl_table=11
NZ_JJLS01000261.1	RefSeq	gene	21143	22765	.	+	.	ID=gene-AC56_RS05180;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=AC56_RS05180;old_locus_tag=AC56_3772
NZ_JJLS01000261.1	Protein Homology	CDS	21143	22765	.	+	0	ID=cds-WP_032279047.1;Parent=gene-AC56_RS05180;Dbxref=GenBank:WP_032279047.1;Name=WP_032279047.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417862.1;locus_tag=AC56_RS05180;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_032279047.1;transl_table=11
NZ_JJLS01000261.1	RefSeq	gene	22841	24193	.	-	.	ID=gene-AC56_RS05175;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;locus_tag=AC56_RS05175;old_locus_tag=AC56_3773
NZ_JJLS01000261.1	Protein Homology	CDS	22841	24193	.	-	0	ID=cds-WP_001253696.1;Parent=gene-AC56_RS05175;Dbxref=GenBank:WP_001253696.1;Name=WP_001253696.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=envZ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417863.1;locus_tag=AC56_RS05175;product=two-component system sensor histidine kinase EnvZ;protein_id=WP_001253696.1;transl_table=11
NZ_JJLS01000261.1	RefSeq	gene	24190	24909	.	-	.	ID=gene-AC56_RS05170;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=AC56_RS05170;old_locus_tag=AC56_3774
NZ_JJLS01000261.1	Protein Homology	CDS	24190	24909	.	-	0	ID=cds-WP_001157751.1;Parent=gene-AC56_RS05170;Dbxref=GenBank:WP_001157751.1;Name=WP_001157751.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=ompR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007374840.1;locus_tag=AC56_RS05170;product=osmolarity response regulator transcription factor OmpR;protein_id=WP_001157751.1;transl_table=11
NZ_JJLS01000261.1	RefSeq	gene	25137	25613	.	+	.	ID=gene-AC56_RS05165;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=AC56_RS05165;old_locus_tag=AC56_3775
NZ_JJLS01000261.1	Protein Homology	CDS	25137	25613	.	+	0	ID=cds-WP_000856737.1;Parent=gene-AC56_RS05165;Dbxref=GenBank:WP_000856737.1;Name=WP_000856737.1;Ontology_term=GO:0032784,GO:0003677;gbkey=CDS;gene=greB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026216.2;locus_tag=AC56_RS05165;product=transcription elongation factor GreB;protein_id=WP_000856737.1;transl_table=11
NZ_JJLS01000261.1	RefSeq	gene	25710	28031	.	+	.	ID=gene-AC56_RS05160;Name=yhgF;gbkey=Gene;gene=yhgF;gene_biotype=protein_coding;locus_tag=AC56_RS05160;old_locus_tag=AC56_3776
NZ_JJLS01000261.1	Protein Homology	CDS	25710	28031	.	+	0	ID=cds-WP_000980706.1;Parent=gene-AC56_RS05160;Dbxref=GenBank:WP_000980706.1;Name=WP_000980706.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;gene=yhgF;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417866.4;locus_tag=AC56_RS05160;product=Tex family protein;protein_id=WP_000980706.1;transl_table=11
NZ_JJLS01000261.1	RefSeq	gene	28469	28696	.	+	.	ID=gene-AC56_RS05155;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=AC56_RS05155;old_locus_tag=AC56_3777
NZ_JJLS01000261.1	Protein Homology	CDS	28469	28696	.	+	0	ID=cds-WP_001200455.1;Parent=gene-AC56_RS05155;Dbxref=GenBank:WP_001200455.1;Name=WP_001200455.1;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312277.1;locus_tag=AC56_RS05155;product=ferrous iron transporter A;protein_id=WP_001200455.1;transl_table=11
NZ_JJLS01000261.1	RefSeq	gene	28713	31034	.	+	.	ID=gene-AC56_RS05150;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=AC56_RS05150;old_locus_tag=AC56_3778
NZ_JJLS01000261.1	Protein Homology	CDS	28713	31034	.	+	0	ID=cds-WP_000737014.1;Parent=gene-AC56_RS05150;Dbxref=GenBank:WP_000737014.1;Name=WP_000737014.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312278.2;locus_tag=AC56_RS05150;product=Fe(2+) transporter permease subunit FeoB;protein_id=WP_000737014.1;transl_table=11
NZ_JJLS01000261.1	RefSeq	gene	31034	31270	.	+	.	ID=gene-AC56_RS05145;Name=feoC;gbkey=Gene;gene=feoC;gene_biotype=protein_coding;locus_tag=AC56_RS05145;old_locus_tag=AC56_3779
NZ_JJLS01000261.1	Protein Homology	CDS	31034	31270	.	+	0	ID=cds-WP_001295699.1;Parent=gene-AC56_RS05145;Dbxref=GenBank:WP_001295699.1;Name=WP_001295699.1;gbkey=CDS;gene=feoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709183.2;locus_tag=AC56_RS05145;product=[Fe-S]-dependent transcriptional repressor FeoC;protein_id=WP_001295699.1;transl_table=11
NZ_JJLS01000261.1	RefSeq	gene	31473	32351	.	+	.	ID=gene-AC56_RS05140;Name=rpnA;gbkey=Gene;gene=rpnA;gene_biotype=protein_coding;locus_tag=AC56_RS05140;old_locus_tag=AC56_3780
NZ_JJLS01000261.1	Protein Homology	CDS	31473	32351	.	+	0	ID=cds-WP_000039090.1;Parent=gene-AC56_RS05140;Dbxref=GenBank:WP_000039090.1;Name=WP_000039090.1;gbkey=CDS;gene=rpnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417870.1;locus_tag=AC56_RS05140;product=recombination-promoting nuclease RpnA;protein_id=WP_000039090.1;transl_table=11
NZ_JJLS01000261.1	RefSeq	gene	32380	33150	.	-	.	ID=gene-AC56_RS05135;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=AC56_RS05135;old_locus_tag=AC56_3781
NZ_JJLS01000261.1	Protein Homology	CDS	32380	33150	.	-	0	ID=cds-WP_001060071.1;Parent=gene-AC56_RS05135;Dbxref=GenBank:WP_001060071.1;Name=WP_001060071.1;Ontology_term=GO:0052689;gbkey=CDS;gene=bioH;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417871.1;locus_tag=AC56_RS05135;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=WP_001060071.1;transl_table=11
NZ_JJLS01000261.1	RefSeq	gene	33414	33620	.	+	.	ID=gene-AC56_RS32825;Name=AC56_RS32825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS32825;old_locus_tag=AC56_3783
NZ_JJLS01000261.1	GeneMarkS-2+	CDS	33414	33620	.	+	0	ID=cds-WP_032279048.1;Parent=gene-AC56_RS32825;Dbxref=GenBank:WP_032279048.1;Name=WP_032279048.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS32825;product=hypothetical protein;protein_id=WP_032279048.1;transl_table=11
NZ_JJLS01000261.1	RefSeq	gene	33686	34843	.	-	.	ID=gene-AC56_RS0127085;Name=AC56_RS0127085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0127085;old_locus_tag=AC56_3784
NZ_JJLS01000261.1	Protein Homology	CDS	33686	34843	.	-	0	ID=cds-WP_248790151.1;Parent=gene-AC56_RS0127085;Dbxref=GenBank:WP_248790151.1;Name=WP_248790151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000183248.1;locus_tag=AC56_RS0127085;product=type II secretion system protein GspD;protein_id=WP_248790151.1;transl_table=11
NZ_JJLS01000261.1	RefSeq	gene	35623	35874	.	+	.	ID=gene-AC56_RS32830;Name=AC56_RS32830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS32830
NZ_JJLS01000261.1	GeneMarkS-2+	CDS	35623	35874	.	+	0	ID=cds-WP_126722546.1;Parent=gene-AC56_RS32830;Dbxref=GenBank:WP_126722546.1;Name=WP_126722546.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS32830;product=hypothetical protein;protein_id=WP_126722546.1;transl_table=11
NZ_JJLS01000261.1	RefSeq	gene	36273	37034	.	-	.	ID=gene-AC56_RS05125;Name=traX;gbkey=Gene;gene=traX;gene_biotype=protein_coding;locus_tag=AC56_RS05125;old_locus_tag=AC56_3787
NZ_JJLS01000261.1	Protein Homology	CDS	36273	37034	.	-	0	ID=cds-WP_162752777.1;Parent=gene-AC56_RS05125;Dbxref=GenBank:WP_162752777.1;Name=WP_162752777.1;gbkey=CDS;gene=traX;inference=COORDINATES: protein motif:HMM:TIGR02755.1;locus_tag=AC56_RS05125;product=type-F conjugative transfer system pilin acetylase TraX;protein_id=WP_162752777.1;transl_table=11
NZ_JJLS01000261.1	RefSeq	gene	37063	38421	.	-	.	ID=gene-AC56_RS31625;Name=AC56_RS31625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS31625;old_locus_tag=AC56_3788
NZ_JJLS01000261.1	Protein Homology	CDS	37063	38421	.	-	0	ID=cds-WP_032279049.1;Parent=gene-AC56_RS31625;Dbxref=GenBank:WP_032279049.1;Name=WP_032279049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001144182.1;locus_tag=AC56_RS31625;product=zonular occludens toxin domain-containing protein;protein_id=WP_032279049.1;transl_table=11
NZ_JJLS01000261.1	RefSeq	gene	38435	38782	.	-	.	ID=gene-AC56_RS05115;Name=AC56_RS05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS05115;old_locus_tag=AC56_3789
NZ_JJLS01000261.1	Protein Homology	CDS	38435	38782	.	-	0	ID=cds-WP_032279050.1;Parent=gene-AC56_RS05115;Dbxref=GenBank:WP_032279050.1;Name=WP_032279050.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037579.6;locus_tag=AC56_RS05115;product=DUF5455 family protein;protein_id=WP_032279050.1;transl_table=11
NZ_JJLS01000261.1	RefSeq	gene	38806	40305	.	-	.	ID=gene-AC56_RS32835;Name=AC56_RS32835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS32835;old_locus_tag=AC56_3790
NZ_JJLS01000261.1	GeneMarkS-2+	CDS	38806	40305	.	-	0	ID=cds-WP_032279051.1;Parent=gene-AC56_RS32835;Dbxref=GenBank:WP_032279051.1;Name=WP_032279051.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS32835;product=hypothetical protein;protein_id=WP_032279051.1;transl_table=11
NZ_JJLS01000261.1	RefSeq	gene	40351	40659	.	-	.	ID=gene-AC56_RS32840;Name=AC56_RS32840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS32840;old_locus_tag=AC56_3791
NZ_JJLS01000261.1	GeneMarkS-2+	CDS	40351	40659	.	-	0	ID=cds-WP_126722543.1;Parent=gene-AC56_RS32840;Dbxref=GenBank:WP_126722543.1;Name=WP_126722543.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS32840;product=hypothetical protein;protein_id=WP_126722543.1;transl_table=11
NZ_JJLS01000261.1	RefSeq	gene	40950	41387	.	-	.	ID=gene-AC56_RS05100;Name=AC56_RS05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS05100;old_locus_tag=AC56_3793
NZ_JJLS01000261.1	Protein Homology	CDS	40950	41387	.	-	0	ID=cds-WP_032279052.1;Parent=gene-AC56_RS05100;Dbxref=GenBank:WP_032279052.1;Name=WP_032279052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575773.1;locus_tag=AC56_RS05100;product=hypothetical protein;protein_id=WP_032279052.1;transl_table=11
NZ_JJLS01000261.1	RefSeq	gene	41398	42897	.	-	.	ID=gene-AC56_RS05095;Name=AC56_RS05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS05095;old_locus_tag=AC56_3794
NZ_JJLS01000261.1	Protein Homology	CDS	41398	42897	.	-	0	ID=cds-WP_248790152.1;Parent=gene-AC56_RS05095;Dbxref=GenBank:WP_248790152.1;Name=WP_248790152.1;Ontology_term=GO:0006260;gbkey=CDS;go_process=DNA replication|0006260||IEA;inference=COORDINATES: protein motif:HMM:NF017640.6;locus_tag=AC56_RS05095;product=replication endonuclease;protein_id=WP_248790152.1;transl_table=11
NZ_JJLS01000261.1	RefSeq	gene	43298	44157	.	-	.	ID=gene-AC56_RS05090;Name=AC56_RS05090;end_range=44157,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS05090;old_locus_tag=AC56_3795;partial=true
NZ_JJLS01000261.1	Protein Homology	CDS	43298	44157	.	-	2	ID=cds-WP_032282484.1-3;Parent=gene-AC56_RS05090;Dbxref=GenBank:WP_032282484.1;Name=WP_032282484.1;Ontology_term=GO:0004803;end_range=44157,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AC56_RS05090;partial=true;product=IS3 family transposase;protein_id=WP_032282484.1;transl_table=11
##sequence-region NZ_JJLS01000262.1 1 23031
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000262.1	RefSeq	region	1	23031	.	+	.	ID=NZ_JJLS01000262.1:1..23031;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000262.1	RefSeq	pseudogene	1	573	.	-	.	ID=gene-AC56_RS32380;Name=AC56_RS32380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS32380;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000262.1	Protein Homology	CDS	1	573	.	-	0	ID=cds-AC56_RS32380;Parent=gene-AC56_RS32380;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AC56_RS32380;partial=true;product=transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000262.1	cmsearch	sequence_feature	176	292	.	-	.	ID=id-AC56_RS32380;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS32380;pseudo=true
NZ_JJLS01000262.1	RefSeq	gene	878	1831	.	-	.	ID=gene-AC56_RS05075;Name=AC56_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS05075;old_locus_tag=AC56_3798
NZ_JJLS01000262.1	Protein Homology	CDS	878	1831	.	-	0	ID=cds-WP_032279062.1;Parent=gene-AC56_RS05075;Dbxref=GenBank:WP_032279062.1;Name=WP_032279062.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001288309.1;locus_tag=AC56_RS05075;product=IS110 family transposase;protein_id=WP_032279062.1;transl_table=11
NZ_JJLS01000262.1	RefSeq	gene	2029	2712	.	+	.	ID=gene-AC56_RS05070;Name=gntX;gbkey=Gene;gene=gntX;gene_biotype=protein_coding;locus_tag=AC56_RS05070;old_locus_tag=AC56_3799
NZ_JJLS01000262.1	Protein Homology	CDS	2029	2712	.	+	0	ID=cds-WP_001333371.1;Parent=gene-AC56_RS05070;Dbxref=GenBank:WP_001333371.1;Name=WP_001333371.1;Ontology_term=GO:0009116;gbkey=CDS;gene=gntX;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417872.2;locus_tag=AC56_RS05070;product=DNA utilization protein GntX;protein_id=WP_001333371.1;transl_table=11
NZ_JJLS01000262.1	RefSeq	gene	2771	3346	.	+	.	ID=gene-AC56_RS05065;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=AC56_RS05065;old_locus_tag=AC56_3800
NZ_JJLS01000262.1	Protein Homology	CDS	2771	3346	.	+	0	ID=cds-WP_000619389.1;Parent=gene-AC56_RS05065;Dbxref=GenBank:WP_000619389.1;Name=WP_000619389.1;Ontology_term=GO:0016226,GO:0051604,GO:0051539;gbkey=CDS;gene=nfuA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=AC56_RS05065;product=Fe-S biogenesis protein NfuA;protein_id=WP_000619389.1;transl_table=11
NZ_JJLS01000262.1	RefSeq	gene	3706	5022	.	+	.	ID=gene-AC56_RS05060;Name=gntT;gbkey=Gene;gene=gntT;gene_biotype=protein_coding;locus_tag=AC56_RS05060;old_locus_tag=AC56_3801
NZ_JJLS01000262.1	Protein Homology	CDS	3706	5022	.	+	0	ID=cds-WP_001131758.1;Parent=gene-AC56_RS05060;Dbxref=GenBank:WP_001131758.1;Name=WP_001131758.1;gbkey=CDS;gene=gntT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312284.1;locus_tag=AC56_RS05060;product=gluconate transporter;protein_id=WP_001131758.1;transl_table=11
NZ_JJLS01000262.1	RefSeq	gene	5067	7151	.	-	.	ID=gene-AC56_RS05055;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=AC56_RS05055;old_locus_tag=AC56_3802
NZ_JJLS01000262.1	Protein Homology	CDS	5067	7151	.	-	0	ID=cds-WP_000444340.1;Parent=gene-AC56_RS05055;Dbxref=GenBank:WP_000444340.1;Name=WP_000444340.1;Ontology_term=GO:0005975,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417875.1;locus_tag=AC56_RS05055;product=4-alpha-glucanotransferase;protein_id=WP_000444340.1;transl_table=11
NZ_JJLS01000262.1	RefSeq	gene	7161	9554	.	-	.	ID=gene-AC56_RS05050;Name=malP;gbkey=Gene;gene=malP;gene_biotype=protein_coding;locus_tag=AC56_RS05050;old_locus_tag=AC56_3803
NZ_JJLS01000262.1	Protein Homology	CDS	7161	9554	.	-	0	ID=cds-WP_000081903.1;Parent=gene-AC56_RS05050;Dbxref=GenBank:WP_000081903.1;Name=WP_000081903.1;Ontology_term=GO:0005975,GO:0008184,GO:0030170;gbkey=CDS;gene=malP;go_function=glycogen phosphorylase activity|0008184||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312286.1;locus_tag=AC56_RS05050;product=maltodextrin phosphorylase;protein_id=WP_000081903.1;transl_table=11
NZ_JJLS01000262.1	RefSeq	gene	10166	12871	.	+	.	ID=gene-AC56_RS05045;Name=malT;gbkey=Gene;gene=malT;gene_biotype=protein_coding;locus_tag=AC56_RS05045;old_locus_tag=AC56_3804
NZ_JJLS01000262.1	Protein Homology	CDS	10166	12871	.	+	0	ID=cds-WP_000906961.1;Parent=gene-AC56_RS05045;Dbxref=GenBank:WP_000906961.1;Name=WP_000906961.1;Ontology_term=GO:0006355,GO:0003677,GO:0005515;gbkey=CDS;gene=malT;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417877.1;locus_tag=AC56_RS05045;product=HTH-type transcriptional regulator MalT;protein_id=WP_000906961.1;transl_table=11
NZ_JJLS01000262.1	RefSeq	gene	12914	13930	.	-	.	ID=gene-AC56_RS05040;Name=rtcA;gbkey=Gene;gene=rtcA;gene_biotype=protein_coding;locus_tag=AC56_RS05040;old_locus_tag=AC56_3805
NZ_JJLS01000262.1	Protein Homology	CDS	12914	13930	.	-	0	ID=cds-WP_001411463.1;Parent=gene-AC56_RS05040;Dbxref=GenBank:WP_001411463.1;Name=WP_001411463.1;Ontology_term=GO:0006396,GO:0003963;gbkey=CDS;gene=rtcA;go_function=RNA-3'-phosphate cyclase activity|0003963||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026219.1;locus_tag=AC56_RS05040;product=RNA 3'-terminal phosphate cyclase;protein_id=WP_001411463.1;transl_table=11
NZ_JJLS01000262.1	RefSeq	gene	13934	15160	.	-	.	ID=gene-AC56_RS05035;Name=rtcB;gbkey=Gene;gene=rtcB;gene_biotype=protein_coding;locus_tag=AC56_RS05035;old_locus_tag=AC56_3806
NZ_JJLS01000262.1	Protein Homology	CDS	13934	15160	.	-	0	ID=cds-WP_001105504.1;Parent=gene-AC56_RS05035;Dbxref=GenBank:WP_001105504.1;Name=WP_001105504.1;gbkey=CDS;gene=rtcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417879.1;locus_tag=AC56_RS05035;product=RNA-splicing ligase RtcB;protein_id=WP_001105504.1;transl_table=11
NZ_JJLS01000262.1	RefSeq	pseudogene	15349	16947	.	+	.	ID=gene-AC56_RS0127090;Name=rtcR;gbkey=Gene;gene=rtcR;gene_biotype=pseudogene;locus_tag=AC56_RS0127090;old_locus_tag=AC56_3807;pseudo=true
NZ_JJLS01000262.1	Protein Homology	CDS	15349	16947	.	+	0	ID=cds-AC56_RS0127090;Parent=gene-AC56_RS0127090;Note=internal stop;gbkey=CDS;gene=rtcR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417880.1;locus_tag=AC56_RS0127090;product=DNA-binding transcriptional regulator RtcR;pseudo=true;transl_table=11
NZ_JJLS01000262.1	RefSeq	gene	16929	17687	.	-	.	ID=gene-AC56_RS05030;Name=AC56_RS05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS05030;old_locus_tag=AC56_3809
NZ_JJLS01000262.1	Protein Homology	CDS	16929	17687	.	-	0	ID=cds-WP_000815099.1;Parent=gene-AC56_RS05030;Dbxref=GenBank:WP_000815099.1;Name=WP_000815099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815090.1;locus_tag=AC56_RS05030;product=DeoR/GlpR family transcriptional regulator;protein_id=WP_000815099.1;transl_table=11
NZ_JJLS01000262.1	RefSeq	gene	17704	18534	.	-	.	ID=gene-AC56_RS05025;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=AC56_RS05025;old_locus_tag=AC56_3810
NZ_JJLS01000262.1	Protein Homology	CDS	17704	18534	.	-	0	ID=cds-WP_000928723.1;Parent=gene-AC56_RS05025;Dbxref=GenBank:WP_000928723.1;Name=WP_000928723.1;Ontology_term=GO:0006508,GO:0004252,GO:0016020;gbkey=CDS;gene=glpG;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026220.1;locus_tag=AC56_RS05025;product=rhomboid family intramembrane serine protease GlpG;protein_id=WP_000928723.1;transl_table=11
NZ_JJLS01000262.1	RefSeq	gene	18579	18905	.	-	.	ID=gene-AC56_RS05020;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=AC56_RS05020;old_locus_tag=AC56_3811
NZ_JJLS01000262.1	Protein Homology	CDS	18579	18905	.	-	0	ID=cds-WP_000371928.1;Parent=gene-AC56_RS05020;Dbxref=GenBank:WP_000371928.1;Name=WP_000371928.1;Ontology_term=GO:0004792;gbkey=CDS;gene=glpE;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417883.1;locus_tag=AC56_RS05020;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_000371928.1;transl_table=11
NZ_JJLS01000262.1	RefSeq	gene	19095	20600	.	+	.	ID=gene-AC56_RS05015;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=AC56_RS05015;old_locus_tag=AC56_3812
NZ_JJLS01000262.1	Protein Homology	CDS	19095	20600	.	+	0	ID=cds-WP_001401234.1;Parent=gene-AC56_RS05015;Dbxref=GenBank:WP_001401234.1;Name=WP_001401234.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312296.1;locus_tag=AC56_RS05015;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_001401234.1;transl_table=11
NZ_JJLS01000262.1	RefSeq	gene	20652	21257	.	-	.	ID=gene-AC56_RS05010;Name=AC56_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS05010;old_locus_tag=AC56_3813
NZ_JJLS01000262.1	Protein Homology	CDS	20652	21257	.	-	0	ID=cds-WP_032279064.1;Parent=gene-AC56_RS05010;Dbxref=GenBank:WP_032279064.1;Name=WP_032279064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000589351.1;locus_tag=AC56_RS05010;product=hypothetical protein;protein_id=WP_032279064.1;transl_table=11
NZ_JJLS01000262.1	RefSeq	gene	21260	22027	.	-	.	ID=gene-AC56_RS05005;Name=AC56_RS05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS05005;old_locus_tag=AC56_3814
NZ_JJLS01000262.1	Protein Homology	CDS	21260	22027	.	-	0	ID=cds-WP_032279066.1;Parent=gene-AC56_RS05005;Dbxref=GenBank:WP_032279066.1;Name=WP_032279066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001182130.1;locus_tag=AC56_RS05005;product=hypothetical protein;protein_id=WP_032279066.1;transl_table=11
NZ_JJLS01000262.1	RefSeq	pseudogene	22030	22560	.	-	.	ID=gene-AC56_RS0127095;Name=AC56_RS0127095;end_range=22560,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0127095;partial=true;pseudo=true
NZ_JJLS01000262.1	Protein Homology	CDS	22030	22560	.	-	0	ID=cds-AC56_RS0127095;Parent=gene-AC56_RS0127095;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=22560,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000424214.1;locus_tag=AC56_RS0127095;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_JJLS01000262.1	RefSeq	pseudogene	22608	23031	.	-	.	ID=gene-AC56_RS05000;Name=AC56_RS05000;end_range=23031,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS05000;old_locus_tag=AC56_3816;partial=true;pseudo=true
NZ_JJLS01000262.1	Protein Homology	CDS	22608	23031	.	-	1	ID=cds-AC56_RS05000;Parent=gene-AC56_RS05000;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=23031,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS05000;partial=true;product=IS5-like element IS903B family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000263.1 1 21448
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000263.1	RefSeq	region	1	21448	.	+	.	ID=NZ_JJLS01000263.1:1..21448;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000263.1	RefSeq	gene	1	528	.	-	.	ID=gene-AC56_RS04995;Name=AC56_RS04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS04995;old_locus_tag=AC56_3817;partial=true;start_range=.,1
NZ_JJLS01000263.1	Protein Homology	CDS	1	528	.	-	0	ID=cds-WP_162752778.1;Parent=gene-AC56_RS04995;Dbxref=GenBank:WP_162752778.1;Name=WP_162752778.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS04995;partial=true;product=IS5 family transposase;protein_id=WP_162752778.1;start_range=.,1;transl_table=11
NZ_JJLS01000263.1	RefSeq	pseudogene	561	758	.	-	.	ID=gene-AC56_RS04990;Name=AC56_RS04990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS04990;old_locus_tag=AC56_3818;partial=true;pseudo=true;start_range=.,561
NZ_JJLS01000263.1	Protein Homology	CDS	561	758	.	-	0	ID=cds-AC56_RS04990;Parent=gene-AC56_RS04990;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000424214.1;locus_tag=AC56_RS04990;partial=true;product=hypothetical protein;pseudo=true;start_range=.,561;transl_table=11
NZ_JJLS01000263.1	RefSeq	gene	774	2282	.	-	.	ID=gene-AC56_RS04985;Name=AC56_RS04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS04985;old_locus_tag=AC56_3819
NZ_JJLS01000263.1	Protein Homology	CDS	774	2282	.	-	0	ID=cds-WP_122985426.1;Parent=gene-AC56_RS04985;Dbxref=GenBank:WP_122985426.1;Name=WP_122985426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001443257.1;locus_tag=AC56_RS04985;product=PstS family phosphate ABC transporter substrate-binding protein;protein_id=WP_122985426.1;transl_table=11
NZ_JJLS01000263.1	RefSeq	gene	2407	4854	.	-	.	ID=gene-AC56_RS04980;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=AC56_RS04980;old_locus_tag=AC56_3820
NZ_JJLS01000263.1	Protein Homology	CDS	2407	4854	.	-	0	ID=cds-WP_000993449.1;Parent=gene-AC56_RS04980;Dbxref=GenBank:WP_000993449.1;Name=WP_000993449.1;Ontology_term=GO:0005975,GO:0008184;gbkey=CDS;gene=glgP;go_function=glycogen phosphorylase activity|0008184||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417886.1;locus_tag=AC56_RS04980;product=glycogen phosphorylase;protein_id=WP_000993449.1;transl_table=11
NZ_JJLS01000263.1	RefSeq	gene	4873	6306	.	-	.	ID=gene-AC56_RS04975;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=AC56_RS04975;old_locus_tag=AC56_3821
NZ_JJLS01000263.1	Protein Homology	CDS	4873	6306	.	-	0	ID=cds-WP_023140658.1;Parent=gene-AC56_RS04975;Dbxref=GenBank:WP_023140658.1;Name=WP_023140658.1;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=alpha-1%2C4-glucan glucosyltransferase (UDP-glucose donor) activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312301.1;locus_tag=AC56_RS04975;product=glycogen synthase GlgA;protein_id=WP_023140658.1;transl_table=11
NZ_JJLS01000263.1	RefSeq	gene	6306	7601	.	-	.	ID=gene-AC56_RS04970;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=AC56_RS04970;old_locus_tag=AC56_3822
NZ_JJLS01000263.1	Protein Homology	CDS	6306	7601	.	-	0	ID=cds-WP_032177643.1;Parent=gene-AC56_RS04970;Dbxref=GenBank:WP_032177643.1;Name=WP_032177643.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312302.1;locus_tag=AC56_RS04970;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_032177643.1;transl_table=11
NZ_JJLS01000263.1	RefSeq	gene	7619	9592	.	-	.	ID=gene-AC56_RS04965;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=AC56_RS04965;old_locus_tag=AC56_3823
NZ_JJLS01000263.1	Protein Homology	CDS	7619	9592	.	-	0	ID=cds-WP_000192559.1;Parent=gene-AC56_RS04965;Dbxref=GenBank:WP_000192559.1;Name=WP_000192559.1;Ontology_term=GO:0005980,GO:0120549;gbkey=CDS;gene=glgX;go_function=limit dextrin alpha-1%2C6-maltotetraose-hydrolase activity|0120549||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417889.1;locus_tag=AC56_RS04965;product=glycogen debranching protein GlgX;protein_id=WP_000192559.1;transl_table=11
NZ_JJLS01000263.1	RefSeq	gene	9589	11775	.	-	.	ID=gene-AC56_RS04960;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=AC56_RS04960;old_locus_tag=AC56_3824
NZ_JJLS01000263.1	Protein Homology	CDS	9589	11775	.	-	0	ID=cds-WP_001283723.1;Parent=gene-AC56_RS04960;Dbxref=GenBank:WP_001283723.1;Name=WP_001283723.1;Ontology_term=GO:0005978,GO:0003844;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417890.1;locus_tag=AC56_RS04960;product=1%2C4-alpha-glucan branching enzyme;protein_id=WP_001283723.1;transl_table=11
NZ_JJLS01000263.1	RefSeq	gene	12048	13151	.	-	.	ID=gene-AC56_RS04955;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=AC56_RS04955;old_locus_tag=AC56_3825
NZ_JJLS01000263.1	Protein Homology	CDS	12048	13151	.	-	0	ID=cds-WP_000799956.1;Parent=gene-AC56_RS04955;Dbxref=GenBank:WP_000799956.1;Name=WP_000799956.1;Ontology_term=GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0004073,GO:0050661;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,NADP binding|0050661||IEA;go_process=methionine biosynthetic process|0009086||IEA,threonine biosynthetic process|0009088||IEA,lysine biosynthetic process via diaminopimelate|0009089||IEA,isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312305.1;locus_tag=AC56_RS04955;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_000799956.1;transl_table=11
NZ_JJLS01000263.1	RefSeq	gene	13343	13936	.	+	.	ID=gene-AC56_RS04950;Name=yhgN;gbkey=Gene;gene=yhgN;gene_biotype=protein_coding;locus_tag=AC56_RS04950;old_locus_tag=AC56_3826
NZ_JJLS01000263.1	Protein Homology	CDS	13343	13936	.	+	0	ID=cds-WP_001002544.1;Parent=gene-AC56_RS04950;Dbxref=GenBank:WP_001002544.1;Name=WP_001002544.1;gbkey=CDS;gene=yhgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312306.1;locus_tag=AC56_RS04950;product=NAAT family transporter YhgN;protein_id=WP_001002544.1;transl_table=11
NZ_JJLS01000263.1	RefSeq	gene	13993	15333	.	-	.	ID=gene-AC56_RS04945;Name=gntU;gbkey=Gene;gene=gntU;gene_biotype=protein_coding;locus_tag=AC56_RS04945;old_locus_tag=AC56_3827
NZ_JJLS01000263.1	Protein Homology	CDS	13993	15333	.	-	0	ID=cds-WP_000210111.1;Parent=gene-AC56_RS04945;Dbxref=GenBank:WP_000210111.1;Name=WP_000210111.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=gntU;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312312.1;locus_tag=AC56_RS04945;product=gluconate transporter;protein_id=WP_000210111.1;transl_table=11
NZ_JJLS01000263.1	RefSeq	gene	15337	15864	.	-	.	ID=gene-AC56_RS04940;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=AC56_RS04940;old_locus_tag=AC56_3828
NZ_JJLS01000263.1	Protein Homology	CDS	15337	15864	.	-	0	ID=cds-WP_000108330.1;Parent=gene-AC56_RS04940;Dbxref=GenBank:WP_000108330.1;Name=WP_000108330.1;gbkey=CDS;gene=gntK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417894.2;locus_tag=AC56_RS04940;product=gluconokinase;protein_id=WP_000108330.1;transl_table=11
NZ_JJLS01000263.1	RefSeq	gene	16003	16998	.	-	.	ID=gene-AC56_RS04935;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=AC56_RS04935;old_locus_tag=AC56_3829
NZ_JJLS01000263.1	Protein Homology	CDS	16003	16998	.	-	0	ID=cds-WP_000730252.1;Parent=gene-AC56_RS04935;Dbxref=GenBank:WP_000730252.1;Name=WP_000730252.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=gntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001693277.1;locus_tag=AC56_RS04935;product=gluconate operon transcriptional repressor GntR;protein_id=WP_000730252.1;transl_table=11
NZ_JJLS01000263.1	RefSeq	gene	17222	17917	.	-	.	ID=gene-AC56_RS04930;Name=yhhW;gbkey=Gene;gene=yhhW;gene_biotype=protein_coding;locus_tag=AC56_RS04930;old_locus_tag=AC56_3831
NZ_JJLS01000263.1	Protein Homology	CDS	17222	17917	.	-	0	ID=cds-WP_000639811.1;Parent=gene-AC56_RS04930;Dbxref=GenBank:WP_000639811.1;Name=WP_000639811.1;gbkey=CDS;gene=yhhW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213399.1;locus_tag=AC56_RS04930;product=quercetin 2%2C3-dioxygenase;protein_id=WP_000639811.1;transl_table=11
NZ_JJLS01000263.1	RefSeq	gene	18040	19077	.	-	.	ID=gene-AC56_RS04925;Name=yhhX;gbkey=Gene;gene=yhhX;gene_biotype=protein_coding;locus_tag=AC56_RS04925;old_locus_tag=AC56_3832
NZ_JJLS01000263.1	Protein Homology	CDS	18040	19077	.	-	0	ID=cds-WP_000236306.1;Parent=gene-AC56_RS04925;Dbxref=GenBank:WP_000236306.1;Name=WP_000236306.1;Ontology_term=GO:0000166;gbkey=CDS;gene=yhhX;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417897.1;locus_tag=AC56_RS04925;product=oxidoreductase;protein_id=WP_000236306.1;transl_table=11
NZ_JJLS01000263.1	RefSeq	gene	19410	19898	.	+	.	ID=gene-AC56_RS04920;Name=yhhY;gbkey=Gene;gene=yhhY;gene_biotype=protein_coding;locus_tag=AC56_RS04920;old_locus_tag=AC56_3833
NZ_JJLS01000263.1	Protein Homology	CDS	19410	19898	.	+	0	ID=cds-WP_001300398.1;Parent=gene-AC56_RS04920;Dbxref=GenBank:WP_001300398.1;Name=WP_001300398.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yhhY;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417898.1;locus_tag=AC56_RS04920;product=N-acetyltransferase;protein_id=WP_001300398.1;transl_table=11
NZ_JJLS01000263.1	RefSeq	pseudogene	20135	20971	.	+	.	ID=gene-AC56_RS04915;Name=tssD;end_range=20971,.;gbkey=Gene;gene=tssD;gene_biotype=pseudogene;locus_tag=AC56_RS04915;old_locus_tag=AC56_3834;partial=true;pseudo=true
NZ_JJLS01000263.1	Protein Homology	CDS	20135	20971	.	+	0	ID=cds-AC56_RS04915;Parent=gene-AC56_RS04915;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=20971,.;gbkey=CDS;gene=tssD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417899.1;locus_tag=AC56_RS04915;partial=true;product=type VI secretion system tube protein TssD;pseudo=true;transl_table=11
NZ_JJLS01000263.1	RefSeq	gene	21004	21448	.	+	.	ID=gene-AC56_RS04910;Name=AC56_RS04910;end_range=21448,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS04910;old_locus_tag=AC56_3835;partial=true
NZ_JJLS01000263.1	Protein Homology	CDS	21004	21448	.	+	0	ID=cds-WP_032282877.1-3;Parent=gene-AC56_RS04910;Dbxref=GenBank:WP_032282877.1;Name=WP_032282877.1;Ontology_term=GO:0004803;end_range=21448,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS04910;partial=true;product=IS5 family transposase;protein_id=WP_032282877.1;transl_table=11
##sequence-region NZ_JJLS01000264.1 1 38651
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000264.1	RefSeq	region	1	38651	.	+	.	ID=NZ_JJLS01000264.1:1..38651;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000264.1	RefSeq	pseudogene	1	442	.	-	.	ID=gene-AC56_RS04905;Name=AC56_RS04905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS04905;old_locus_tag=AC56_3836;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000264.1	Protein Homology	CDS	1	442	.	-	0	ID=cds-AC56_RS04905;Parent=gene-AC56_RS04905;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS04905;partial=true;product=IS5-like element ISKpn26 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000264.1	RefSeq	pseudogene	511	867	.	+	.	ID=gene-AC56_RS0127100;Name=AC56_RS0127100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0127100;partial=true;pseudo=true;start_range=.,511
NZ_JJLS01000264.1	Protein Homology	CDS	511	867	.	+	0	ID=cds-AC56_RS0127100;Parent=gene-AC56_RS0127100;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417899.1;locus_tag=AC56_RS0127100;partial=true;product=type VI secretion system tube protein Hcp;pseudo=true;start_range=.,511;transl_table=11
NZ_JJLS01000264.1	RefSeq	gene	864	1358	.	+	.	ID=gene-AC56_RS04900;Name=yrhA;gbkey=Gene;gene=yrhA;gene_biotype=protein_coding;locus_tag=AC56_RS04900;old_locus_tag=AC56_3837
NZ_JJLS01000264.1	Protein Homology	CDS	864	1358	.	+	0	ID=cds-WP_000988496.1;Parent=gene-AC56_RS04900;Dbxref=GenBank:WP_000988496.1;Name=WP_000988496.1;gbkey=CDS;gene=yrhA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000988499.1;locus_tag=AC56_RS04900;product=protein YrhA;protein_id=WP_000988496.1;transl_table=11
NZ_JJLS01000264.1	RefSeq	gene	1453	1608	.	+	.	ID=gene-AC56_RS32845;Name=yrhD;gbkey=Gene;gene=yrhD;gene_biotype=protein_coding;locus_tag=AC56_RS32845
NZ_JJLS01000264.1	Protein Homology	CDS	1453	1608	.	+	0	ID=cds-WP_001307436.1;Parent=gene-AC56_RS32845;Dbxref=GenBank:WP_001307436.1;Name=WP_001307436.1;gbkey=CDS;gene=yrhD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518820.1;locus_tag=AC56_RS32845;product=protein YrhD;protein_id=WP_001307436.1;transl_table=11
NZ_JJLS01000264.1	RefSeq	gene	1808	2092	.	+	.	ID=gene-AC56_RS04895;Name=yrhB;gbkey=Gene;gene=yrhB;gene_biotype=protein_coding;locus_tag=AC56_RS04895;old_locus_tag=AC56_3838
NZ_JJLS01000264.1	Protein Homology	CDS	1808	2092	.	+	0	ID=cds-WP_000634159.1;Parent=gene-AC56_RS04895;Dbxref=GenBank:WP_000634159.1;Name=WP_000634159.1;gbkey=CDS;gene=yrhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417903.1;locus_tag=AC56_RS04895;product=YrhB family protein;protein_id=WP_000634159.1;transl_table=11
NZ_JJLS01000264.1	RefSeq	gene	2130	3872	.	-	.	ID=gene-AC56_RS04890;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=AC56_RS04890;old_locus_tag=AC56_3839
NZ_JJLS01000264.1	Protein Homology	CDS	2130	3872	.	-	0	ID=cds-WP_001508014.1;Parent=gene-AC56_RS04890;Dbxref=GenBank:WP_001508014.1;Name=WP_001508014.1;Ontology_term=GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001486198.1;locus_tag=AC56_RS04890;product=gamma-glutamyltransferase;protein_id=WP_001508014.1;transl_table=11
NZ_JJLS01000264.1	RefSeq	gene	3992	4432	.	+	.	ID=gene-AC56_RS04885;Name=yhhA;gbkey=Gene;gene=yhhA;gene_biotype=protein_coding;locus_tag=AC56_RS04885;old_locus_tag=AC56_3840
NZ_JJLS01000264.1	Protein Homology	CDS	3992	4432	.	+	0	ID=cds-WP_000825996.1;Parent=gene-AC56_RS04885;Dbxref=GenBank:WP_000825996.1;Name=WP_000825996.1;gbkey=CDS;gene=yhhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417905.1;locus_tag=AC56_RS04885;product=DUF2756 family protein;protein_id=WP_000825996.1;transl_table=11
NZ_JJLS01000264.1	RefSeq	gene	4419	5162	.	-	.	ID=gene-AC56_RS04880;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=AC56_RS04880;old_locus_tag=AC56_3841
NZ_JJLS01000264.1	Protein Homology	CDS	4419	5162	.	-	0	ID=cds-WP_000073599.1;Parent=gene-AC56_RS04880;Dbxref=GenBank:WP_000073599.1;Name=WP_000073599.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=ugpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312322.1;locus_tag=AC56_RS04880;product=glycerophosphodiester phosphodiesterase;protein_id=WP_000073599.1;transl_table=11
NZ_JJLS01000264.1	RefSeq	gene	5159	6229	.	-	.	ID=gene-AC56_RS04875;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=AC56_RS04875;old_locus_tag=AC56_3842
NZ_JJLS01000264.1	Protein Homology	CDS	5159	6229	.	-	0	ID=cds-WP_000907790.1;Parent=gene-AC56_RS04875;Dbxref=GenBank:WP_000907790.1;Name=WP_000907790.1;gbkey=CDS;gene=ugpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417907.2;locus_tag=AC56_RS04875;product=sn-glycerol 3-phosphate ABC transporter ATP binding protein UgpC;protein_id=WP_000907790.1;transl_table=11
NZ_JJLS01000264.1	RefSeq	gene	6231	7076	.	-	.	ID=gene-AC56_RS04870;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=AC56_RS04870;old_locus_tag=AC56_3843
NZ_JJLS01000264.1	Protein Homology	CDS	6231	7076	.	-	0	ID=cds-WP_000572164.1;Parent=gene-AC56_RS04870;Dbxref=GenBank:WP_000572164.1;Name=WP_000572164.1;Ontology_term=GO:0015794,GO:0005886,GO:0055052;gbkey=CDS;gene=ugpE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572177.1;locus_tag=AC56_RS04870;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=WP_000572164.1;transl_table=11
NZ_JJLS01000264.1	RefSeq	gene	7073	7960	.	-	.	ID=gene-AC56_RS04865;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=AC56_RS04865;old_locus_tag=AC56_3844
NZ_JJLS01000264.1	Protein Homology	CDS	7073	7960	.	-	0	ID=cds-WP_000099289.1;Parent=gene-AC56_RS04865;Dbxref=GenBank:WP_000099289.1;Name=WP_000099289.1;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099274.1;locus_tag=AC56_RS04865;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=WP_000099289.1;transl_table=11
NZ_JJLS01000264.1	RefSeq	gene	8058	9374	.	-	.	ID=gene-AC56_RS04860;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=AC56_RS04860;old_locus_tag=AC56_3845
NZ_JJLS01000264.1	Protein Homology	CDS	8058	9374	.	-	0	ID=cds-WP_000803190.1;Parent=gene-AC56_RS04860;Dbxref=GenBank:WP_000803190.1;Name=WP_000803190.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ugpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312326.1;locus_tag=AC56_RS04860;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=WP_000803190.1;transl_table=11
NZ_JJLS01000264.1	RefSeq	gene	9771	10484	.	-	.	ID=gene-AC56_RS04855;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=AC56_RS04855;old_locus_tag=AC56_3847
NZ_JJLS01000264.1	Protein Homology	CDS	9771	10484	.	-	0	ID=cds-WP_000416900.1;Parent=gene-AC56_RS04855;Dbxref=GenBank:WP_000416900.1;Name=WP_000416900.1;gbkey=CDS;gene=livF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312328.2;locus_tag=AC56_RS04855;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF;protein_id=WP_000416900.1;transl_table=11
NZ_JJLS01000264.1	RefSeq	gene	10486	11253	.	-	.	ID=gene-AC56_RS04850;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=AC56_RS04850;old_locus_tag=AC56_3848
NZ_JJLS01000264.1	Protein Homology	CDS	10486	11253	.	-	0	ID=cds-WP_000082101.1;Parent=gene-AC56_RS04850;Dbxref=GenBank:WP_000082101.1;Name=WP_000082101.1;gbkey=CDS;gene=livG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084170.1;locus_tag=AC56_RS04850;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=WP_000082101.1;transl_table=11
NZ_JJLS01000264.1	RefSeq	gene	11250	12527	.	-	.	ID=gene-AC56_RS04845;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=AC56_RS04845;old_locus_tag=AC56_3849
NZ_JJLS01000264.1	Protein Homology	CDS	11250	12527	.	-	0	ID=cds-WP_000803782.1;Parent=gene-AC56_RS04845;Dbxref=GenBank:WP_000803782.1;Name=WP_000803782.1;gbkey=CDS;gene=livM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312330.1;locus_tag=AC56_RS04845;product=branched chain amino acid ABC transporter permease LivM;protein_id=WP_000803782.1;transl_table=11
NZ_JJLS01000264.1	RefSeq	gene	12524	13450	.	-	.	ID=gene-AC56_RS04840;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=AC56_RS04840;old_locus_tag=AC56_3850
NZ_JJLS01000264.1	Protein Homology	CDS	12524	13450	.	-	0	ID=cds-WP_032279081.1;Parent=gene-AC56_RS04840;Dbxref=GenBank:WP_032279081.1;Name=WP_032279081.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=livH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1;locus_tag=AC56_RS04840;product=high-affinity branched-chain amino acid ABC transporter permease LivH;protein_id=WP_032279081.1;transl_table=11
NZ_JJLS01000264.1	RefSeq	gene	13498	14607	.	-	.	ID=gene-AC56_RS04835;Name=livK;gbkey=Gene;gene=livK;gene_biotype=protein_coding;locus_tag=AC56_RS04835;old_locus_tag=AC56_3851
NZ_JJLS01000264.1	Protein Homology	CDS	13498	14607	.	-	0	ID=cds-WP_000827696.1;Parent=gene-AC56_RS04835;Dbxref=GenBank:WP_000827696.1;Name=WP_000827696.1;gbkey=CDS;gene=livK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417915.1;locus_tag=AC56_RS04835;product=high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK;protein_id=WP_000827696.1;transl_table=11
NZ_JJLS01000264.1	RefSeq	gene	15031	15414	.	+	.	ID=gene-AC56_RS04830;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=AC56_RS04830;old_locus_tag=AC56_3853
NZ_JJLS01000264.1	Protein Homology	CDS	15031	15414	.	+	0	ID=cds-WP_000778795.1;Parent=gene-AC56_RS04830;Dbxref=GenBank:WP_000778795.1;Name=WP_000778795.1;Ontology_term=GO:0015940,GO:0031638,GO:0008080;gbkey=CDS;gene=panM;go_function=N-acetyltransferase activity|0008080||IEA;go_process=pantothenate biosynthetic process|0015940||IEA,zymogen activation|0031638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709229.1;locus_tag=AC56_RS04830;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=WP_000778795.1;transl_table=11
NZ_JJLS01000264.1	RefSeq	gene	15613	16716	.	-	.	ID=gene-AC56_RS04820;Name=livJ;gbkey=Gene;gene=livJ;gene_biotype=protein_coding;locus_tag=AC56_RS04820;old_locus_tag=AC56_3855
NZ_JJLS01000264.1	Protein Homology	CDS	15613	16716	.	-	0	ID=cds-WP_001022007.1;Parent=gene-AC56_RS04820;Dbxref=GenBank:WP_001022007.1;Name=WP_001022007.1;gbkey=CDS;gene=livJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026223.1;locus_tag=AC56_RS04820;product=branched chain amino acid ABC transporter substrate-binding protein LivJ;protein_id=WP_001022007.1;transl_table=11
NZ_JJLS01000264.1	RefSeq	gene	16987	17841	.	-	.	ID=gene-AC56_RS04815;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=AC56_RS04815;old_locus_tag=AC56_3856
NZ_JJLS01000264.1	Protein Homology	CDS	16987	17841	.	-	0	ID=cds-WP_000130217.1;Parent=gene-AC56_RS04815;Dbxref=GenBank:WP_000130217.1;Name=WP_000130217.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoH;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312337.1;locus_tag=AC56_RS04815;product=RNA polymerase sigma factor RpoH;protein_id=WP_000130217.1;transl_table=11
NZ_JJLS01000264.1	RefSeq	gene	18086	19144	.	-	.	ID=gene-AC56_RS04810;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=AC56_RS04810;old_locus_tag=AC56_3857
NZ_JJLS01000264.1	Protein Homology	CDS	18086	19144	.	-	0	ID=cds-WP_001042003.1;Parent=gene-AC56_RS04810;Dbxref=GenBank:WP_001042003.1;Name=WP_001042003.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417919.1;locus_tag=AC56_RS04810;product=permease-like cell division protein FtsX;protein_id=WP_001042003.1;transl_table=11
NZ_JJLS01000264.1	RefSeq	gene	19137	19805	.	-	.	ID=gene-AC56_RS04805;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=AC56_RS04805;old_locus_tag=AC56_3858
NZ_JJLS01000264.1	Protein Homology	CDS	19137	19805	.	-	0	ID=cds-WP_001397953.1;Parent=gene-AC56_RS04805;Dbxref=GenBank:WP_001397953.1;Name=WP_001397953.1;Ontology_term=GO:0000910,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312339.1;locus_tag=AC56_RS04805;product=cell division ATP-binding protein FtsE;protein_id=WP_001397953.1;transl_table=11
NZ_JJLS01000264.1	RefSeq	gene	19808	21304	.	-	.	ID=gene-AC56_RS04800;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=AC56_RS04800;old_locus_tag=AC56_3859
NZ_JJLS01000264.1	Protein Homology	CDS	19808	21304	.	-	0	ID=cds-WP_001040683.1;Parent=gene-AC56_RS04800;Dbxref=GenBank:WP_001040683.1;Name=WP_001040683.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312340.1;locus_tag=AC56_RS04800;product=signal recognition particle-docking protein FtsY;protein_id=WP_001040683.1;transl_table=11
NZ_JJLS01000264.1	RefSeq	gene	21454	22050	.	+	.	ID=gene-AC56_RS04795;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=AC56_RS04795;old_locus_tag=AC56_3860
NZ_JJLS01000264.1	Protein Homology	CDS	21454	22050	.	+	0	ID=cds-WP_032279083.1;Parent=gene-AC56_RS04795;Dbxref=GenBank:WP_032279083.1;Name=WP_032279083.1;Ontology_term=GO:0031167,GO:0003676,GO:0008168;gbkey=CDS;gene=rsmD;go_function=nucleic acid binding|0003676||IEA,methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417922.1;locus_tag=AC56_RS04795;product=16S rRNA (guanine(966)-N(2))-methyltransferase;protein_id=WP_032279083.1;transl_table=11
NZ_JJLS01000264.1	RefSeq	gene	22040	22309	.	+	.	ID=gene-AC56_RS04790;Name=yhhL;gbkey=Gene;gene=yhhL;gene_biotype=protein_coding;locus_tag=AC56_RS04790;old_locus_tag=AC56_3861
NZ_JJLS01000264.1	Protein Homology	CDS	22040	22309	.	+	0	ID=cds-WP_001384370.1;Parent=gene-AC56_RS04790;Dbxref=GenBank:WP_001384370.1;Name=WP_001384370.1;gbkey=CDS;gene=yhhL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312342.1;locus_tag=AC56_RS04790;product=DUF1145 family protein;protein_id=WP_001384370.1;transl_table=11
NZ_JJLS01000264.1	RefSeq	gene	22312	22671	.	-	.	ID=gene-AC56_RS04785;Name=yhhM;gbkey=Gene;gene=yhhM;gene_biotype=protein_coding;locus_tag=AC56_RS04785;old_locus_tag=AC56_3862
NZ_JJLS01000264.1	Protein Homology	CDS	22312	22671	.	-	0	ID=cds-WP_000042903.1;Parent=gene-AC56_RS04785;Dbxref=GenBank:WP_000042903.1;Name=WP_000042903.1;gbkey=CDS;gene=yhhM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709237.1;locus_tag=AC56_RS04785;product=DUF2500 domain-containing protein;protein_id=WP_000042903.1;transl_table=11
NZ_JJLS01000264.1	RefSeq	gene	22812	23438	.	+	.	ID=gene-AC56_RS04780;Name=yhhN;gbkey=Gene;gene=yhhN;gene_biotype=protein_coding;locus_tag=AC56_RS04780;old_locus_tag=AC56_3863
NZ_JJLS01000264.1	Protein Homology	CDS	22812	23438	.	+	0	ID=cds-WP_000964718.1;Parent=gene-AC56_RS04780;Dbxref=GenBank:WP_000964718.1;Name=WP_000964718.1;gbkey=CDS;gene=yhhN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312344.1;locus_tag=AC56_RS04780;product=lysoplasmalogenase;protein_id=WP_000964718.1;transl_table=11
NZ_JJLS01000264.1	RefSeq	gene	23512	25710	.	+	.	ID=gene-AC56_RS04775;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=AC56_RS04775;old_locus_tag=AC56_3864
NZ_JJLS01000264.1	Protein Homology	CDS	23512	25710	.	+	0	ID=cds-WP_032279086.1;Parent=gene-AC56_RS04775;Dbxref=GenBank:WP_032279086.1;Name=WP_032279086.1;Ontology_term=GO:0006812,GO:0005215,GO:0005524,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;gene=zntA;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312345.1;locus_tag=AC56_RS04775;product=Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA;protein_id=WP_032279086.1;transl_table=11
NZ_JJLS01000264.1	RefSeq	gene	25812	26057	.	-	.	ID=gene-AC56_RS04770;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=AC56_RS04770;old_locus_tag=AC56_3865
NZ_JJLS01000264.1	Protein Homology	CDS	25812	26057	.	-	0	ID=cds-WP_000130621.1;Parent=gene-AC56_RS04770;Dbxref=GenBank:WP_000130621.1;Name=WP_000130621.1;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312346.1;locus_tag=AC56_RS04770;product=sulfurtransferase TusA;protein_id=WP_000130621.1;transl_table=11
NZ_JJLS01000264.1	RefSeq	gene	26278	26943	.	+	.	ID=gene-AC56_RS04765;Name=yhhQ;gbkey=Gene;gene=yhhQ;gene_biotype=protein_coding;locus_tag=AC56_RS04765;old_locus_tag=AC56_3866
NZ_JJLS01000264.1	Protein Homology	CDS	26278	26943	.	+	0	ID=cds-WP_001100469.1;Parent=gene-AC56_RS04765;Dbxref=GenBank:WP_001100469.1;Name=WP_001100469.1;Ontology_term=GO:1990397;gbkey=CDS;gene=yhhQ;go_process=queuosine salvage|1990397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417928.1;locus_tag=AC56_RS04765;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=WP_001100469.1;transl_table=11
NZ_JJLS01000264.1	RefSeq	gene	27016	27573	.	+	.	ID=gene-AC56_RS04760;Name=dcrB;gbkey=Gene;gene=dcrB;gene_biotype=protein_coding;locus_tag=AC56_RS04760;old_locus_tag=AC56_3867
NZ_JJLS01000264.1	Protein Homology	CDS	27016	27573	.	+	0	ID=cds-WP_001245295.1;Parent=gene-AC56_RS04760;Dbxref=GenBank:WP_001245295.1;Name=WP_001245295.1;gbkey=CDS;gene=dcrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417929.4;locus_tag=AC56_RS04760;product=phage sensitivity protein DcrB;protein_id=WP_001245295.1;transl_table=11
NZ_JJLS01000264.1	RefSeq	gene	27577	28794	.	-	.	ID=gene-AC56_RS04755;Name=yhhS;gbkey=Gene;gene=yhhS;gene_biotype=protein_coding;locus_tag=AC56_RS04755;old_locus_tag=AC56_3868
NZ_JJLS01000264.1	Protein Homology	CDS	27577	28794	.	-	0	ID=cds-WP_001300943.1;Parent=gene-AC56_RS04755;Dbxref=GenBank:WP_001300943.1;Name=WP_001300943.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=yhhS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417930.2;locus_tag=AC56_RS04755;product=MFS transporter;protein_id=WP_001300943.1;transl_table=11
NZ_JJLS01000264.1	RefSeq	gene	28926	29975	.	+	.	ID=gene-AC56_RS04750;Name=yhhT;gbkey=Gene;gene=yhhT;gene_biotype=protein_coding;locus_tag=AC56_RS04750;old_locus_tag=AC56_3869
NZ_JJLS01000264.1	Protein Homology	CDS	28926	29975	.	+	0	ID=cds-WP_001300885.1;Parent=gene-AC56_RS04750;Dbxref=GenBank:WP_001300885.1;Name=WP_001300885.1;gbkey=CDS;gene=yhhT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312350.2;locus_tag=AC56_RS04750;product=AI-2E family transporter;protein_id=WP_001300885.1;transl_table=11
NZ_JJLS01000264.1	RefSeq	gene	30030	30617	.	+	.	ID=gene-AC56_RS04745;Name=acpT;gbkey=Gene;gene=acpT;gene_biotype=protein_coding;locus_tag=AC56_RS04745;old_locus_tag=AC56_3870
NZ_JJLS01000264.1	Protein Homology	CDS	30030	30617	.	+	0	ID=cds-WP_000285774.1;Parent=gene-AC56_RS04745;Dbxref=GenBank:WP_000285774.1;Name=WP_000285774.1;gbkey=CDS;gene=acpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417932.1;locus_tag=AC56_RS04745;product=4'-phosphopantetheinyl transferase AcpT;protein_id=WP_000285774.1;transl_table=11
NZ_JJLS01000264.1	RefSeq	gene	30728	32302	.	+	.	ID=gene-AC56_RS04740;Name=nikA;gbkey=Gene;gene=nikA;gene_biotype=protein_coding;locus_tag=AC56_RS04740;old_locus_tag=AC56_3871
NZ_JJLS01000264.1	Protein Homology	CDS	30728	32302	.	+	0	ID=cds-WP_000953353.1;Parent=gene-AC56_RS04740;Dbxref=GenBank:WP_000953353.1;Name=WP_000953353.1;Ontology_term=GO:0015675,GO:0015413,GO:0016151,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=nikA;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type nickel transporter activity|0015413||IEA,nickel cation binding|0016151||IEA;go_process=nickel cation transport|0015675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417933.1;locus_tag=AC56_RS04740;product=nickel ABC transporter substrate-binding protein;protein_id=WP_000953353.1;transl_table=11
NZ_JJLS01000264.1	RefSeq	gene	32302	33246	.	+	.	ID=gene-AC56_RS04735;Name=nikB;gbkey=Gene;gene=nikB;gene_biotype=protein_coding;locus_tag=AC56_RS04735;old_locus_tag=AC56_3872
NZ_JJLS01000264.1	Protein Homology	CDS	32302	33246	.	+	0	ID=cds-WP_000947068.1;Parent=gene-AC56_RS04735;Dbxref=GenBank:WP_000947068.1;Name=WP_000947068.1;gbkey=CDS;gene=nikB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417934.1;locus_tag=AC56_RS04735;product=nickel ABC transporter permease subunit NikB;protein_id=WP_000947068.1;transl_table=11
NZ_JJLS01000264.1	RefSeq	gene	33243	34076	.	+	.	ID=gene-AC56_RS04730;Name=nikC;gbkey=Gene;gene=nikC;gene_biotype=protein_coding;locus_tag=AC56_RS04730;old_locus_tag=AC56_3873
NZ_JJLS01000264.1	Protein Homology	CDS	33243	34076	.	+	0	ID=cds-WP_001008963.1;Parent=gene-AC56_RS04730;Dbxref=GenBank:WP_001008963.1;Name=WP_001008963.1;Ontology_term=GO:0055085,GO:0015099,GO:0016020;gbkey=CDS;gene=nikC;go_component=membrane|0016020||IEA;go_function=nickel cation transmembrane transporter activity|0015099||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312372.1;locus_tag=AC56_RS04730;product=nickel ABC transporter permease subunit NikC;protein_id=WP_001008963.1;transl_table=11
NZ_JJLS01000264.1	RefSeq	gene	34076	34840	.	+	.	ID=gene-AC56_RS04725;Name=nikD;gbkey=Gene;gene=nikD;gene_biotype=protein_coding;locus_tag=AC56_RS04725;old_locus_tag=AC56_3874
NZ_JJLS01000264.1	Protein Homology	CDS	34076	34840	.	+	0	ID=cds-WP_001136229.1;Parent=gene-AC56_RS04725;Dbxref=GenBank:WP_001136229.1;Name=WP_001136229.1;Ontology_term=GO:0015675,GO:0015413,GO:0016151,GO:0005886,GO:0043190;gbkey=CDS;gene=nikD;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type nickel transporter activity|0015413||IEA,nickel cation binding|0016151||IEA;go_process=nickel cation transport|0015675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417936.1;locus_tag=AC56_RS04725;product=nickel import ATP-binding protein NikD;protein_id=WP_001136229.1;transl_table=11
NZ_JJLS01000264.1	RefSeq	gene	34837	35643	.	+	.	ID=gene-AC56_RS04720;Name=nikE;gbkey=Gene;gene=nikE;gene_biotype=protein_coding;locus_tag=AC56_RS04720;old_locus_tag=AC56_3875
NZ_JJLS01000264.1	Protein Homology	CDS	34837	35643	.	+	0	ID=cds-WP_000173631.1;Parent=gene-AC56_RS04720;Dbxref=GenBank:WP_000173631.1;Name=WP_000173631.1;Ontology_term=GO:0015675,GO:0005524,GO:0015413,GO:0005886,GO:0043190;gbkey=CDS;gene=nikE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type nickel transporter activity|0015413||IEA;go_process=nickel cation transport|0015675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417937.1;locus_tag=AC56_RS04720;product=nickel import ATP-binding protein NikE;protein_id=WP_000173631.1;transl_table=11
NZ_JJLS01000264.1	RefSeq	gene	35649	36050	.	+	.	ID=gene-AC56_RS04715;Name=nikR;gbkey=Gene;gene=nikR;gene_biotype=protein_coding;locus_tag=AC56_RS04715;old_locus_tag=AC56_3876
NZ_JJLS01000264.1	Protein Homology	CDS	35649	36050	.	+	0	ID=cds-WP_001190062.1;Parent=gene-AC56_RS04715;Dbxref=GenBank:WP_001190062.1;Name=WP_001190062.1;Ontology_term=GO:0006355,GO:0010045,GO:0003677,GO:0016151;gbkey=CDS;gene=nikR;go_function=DNA binding|0003677||IEA,nickel cation binding|0016151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to nickel cation|0010045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312375.1;locus_tag=AC56_RS04715;product=nickel-responsive transcriptional regulator NikR;protein_id=WP_001190062.1;transl_table=11
NZ_JJLS01000264.1	RefSeq	pseudogene	36253	38651	.	+	.	ID=gene-AC56_RS04710;Name=rhsB;end_range=38651,.;gbkey=Gene;gene=rhsB;gene_biotype=pseudogene;locus_tag=AC56_RS04710;old_locus_tag=AC56_3877;partial=true;pseudo=true
NZ_JJLS01000264.1	Protein Homology	CDS	36253	38651	.	+	0	ID=cds-AC56_RS04710;Parent=gene-AC56_RS04710;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=38651,.;gbkey=CDS;gene=rhsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418050.1;locus_tag=AC56_RS04710;partial=true;product=rhs element protein RhsB;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000265.1 1 1683
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000265.1	RefSeq	region	1	1683	.	+	.	ID=NZ_JJLS01000265.1:1..1683;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000265.1	RefSeq	pseudogene	1	1082	.	+	.	ID=gene-AC56_RS04705;Name=rhsC;end_range=1082,.;gbkey=Gene;gene=rhsC;gene_biotype=pseudogene;locus_tag=AC56_RS04705;old_locus_tag=AC56_3878;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000265.1	Protein Homology	CDS	1	1082	.	+	2	ID=cds-AC56_RS04705;Parent=gene-AC56_RS04705;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1082,.;gbkey=CDS;gene=rhsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308756.1;locus_tag=AC56_RS04705;partial=true;product=rhs element protein RhsC;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000265.1	RefSeq	gene	1256	1683	.	+	.	ID=gene-AC56_RS04700;Name=AC56_RS04700;end_range=1683,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS04700;old_locus_tag=AC56_3879;partial=true
NZ_JJLS01000265.1	Protein Homology	CDS	1256	1683	.	+	0	ID=cds-WP_032282800.1-2;Parent=gene-AC56_RS04700;Dbxref=GenBank:WP_032282800.1;Name=WP_032282800.1;Ontology_term=GO:0004803;end_range=1683,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS04700;partial=true;product=IS5 family transposase;protein_id=WP_032282800.1;transl_table=11
##sequence-region NZ_JJLS01000266.1 1 766
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000266.1	RefSeq	region	1	766	.	+	.	ID=NZ_JJLS01000266.1:1..766;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000266.1	RefSeq	gene	1	477	.	-	.	ID=gene-AC56_RS04695;Name=AC56_RS04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS04695;old_locus_tag=AC56_3880;partial=true;start_range=.,1
NZ_JJLS01000266.1	Protein Homology	CDS	1	477	.	-	0	ID=cds-WP_032282888.1;Parent=gene-AC56_RS04695;Dbxref=GenBank:WP_032282888.1;Name=WP_032282888.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS04695;partial=true;product=IS5 family transposase;protein_id=WP_032282888.1;start_range=.,1;transl_table=11
NZ_JJLS01000266.1	RefSeq	gene	643	766	.	+	.	ID=gene-AC56_RS30260;Name=AC56_RS30260;end_range=766,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS30260;old_locus_tag=AC56_3881;partial=true
NZ_JJLS01000266.1	Protein Homology	CDS	643	766	.	+	0	ID=cds-WP_148897254.1;Parent=gene-AC56_RS30260;Dbxref=GenBank:WP_148897254.1;Name=WP_148897254.1;Ontology_term=GO:0006310,GO:0006313,GO:0015074,GO:0032196,GO:0003677,GO:0004803;end_range=766,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA recombination|0006310||IEA,DNA transposition|0006313||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AC56_RS30260;partial=true;product=transposase family protein;protein_id=WP_148897254.1;transl_table=11
##sequence-region NZ_JJLS01000267.1 1 14592
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000267.1	RefSeq	region	1	14592	.	+	.	ID=NZ_JJLS01000267.1:1..14592;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000267.1	RefSeq	gene	1	769	.	+	.	ID=gene-AC56_RS04690;Name=AC56_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS04690;old_locus_tag=AC56_3882;partial=true;start_range=.,1
NZ_JJLS01000267.1	Protein Homology	CDS	1	769	.	+	1	ID=cds-WP_032282891.1;Parent=gene-AC56_RS04690;Dbxref=GenBank:WP_032282891.1;Name=WP_032282891.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AC56_RS04690;partial=true;product=ISAs1-like element ISEc1 family transposase;protein_id=WP_032282891.1;start_range=.,1;transl_table=11
NZ_JJLS01000267.1	RefSeq	gene	934	2058	.	-	.	ID=gene-AC56_RS04685;Name=yhhJ;gbkey=Gene;gene=yhhJ;gene_biotype=protein_coding;locus_tag=AC56_RS04685;old_locus_tag=AC56_3883
NZ_JJLS01000267.1	Protein Homology	CDS	934	2058	.	-	0	ID=cds-WP_001216257.1;Parent=gene-AC56_RS04685;Dbxref=GenBank:WP_001216257.1;Name=WP_001216257.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;gene=yhhJ;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709253.2;locus_tag=AC56_RS04685;product=ABC transporter permease;protein_id=WP_001216257.1;transl_table=11
NZ_JJLS01000267.1	RefSeq	gene	2058	4793	.	-	.	ID=gene-AC56_RS04680;Name=rbbA;gbkey=Gene;gene=rbbA;gene_biotype=protein_coding;locus_tag=AC56_RS04680;old_locus_tag=AC56_3884
NZ_JJLS01000267.1	Protein Homology	CDS	2058	4793	.	-	0	ID=cds-WP_032279093.1;Parent=gene-AC56_RS04680;Dbxref=GenBank:WP_032279093.1;Name=WP_032279093.1;gbkey=CDS;gene=rbbA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026225.1;locus_tag=AC56_RS04680;product=ribosome-associated ATPase/putative transporter RbbA;protein_id=WP_032279093.1;transl_table=11
NZ_JJLS01000267.1	RefSeq	gene	4790	5857	.	-	.	ID=gene-AC56_RS04675;Name=yhiI;gbkey=Gene;gene=yhiI;gene_biotype=protein_coding;locus_tag=AC56_RS04675;old_locus_tag=AC56_3885
NZ_JJLS01000267.1	Protein Homology	CDS	4790	5857	.	-	0	ID=cds-WP_001652214.1;Parent=gene-AC56_RS04675;Dbxref=GenBank:WP_001652214.1;Name=WP_001652214.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yhiI;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312387.1;locus_tag=AC56_RS04675;product=HlyD family secretion protein;protein_id=WP_001652214.1;transl_table=11
NZ_JJLS01000267.1	RefSeq	gene	5920	6033	.	-	.	ID=gene-AC56_RS33405;Name=yhiY;gbkey=Gene;gene=yhiY;gene_biotype=protein_coding;locus_tag=AC56_RS33405;old_locus_tag=AC56_3886
NZ_JJLS01000267.1	Protein Homology	CDS	5920	6033	.	-	0	ID=cds-WP_001296785.1;Parent=gene-AC56_RS33405;Dbxref=GenBank:WP_001296785.1;Name=WP_001296785.1;gbkey=CDS;gene=yhiY;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051203.1;locus_tag=AC56_RS33405;product=protein YhiY;protein_id=WP_001296785.1;transl_table=11
NZ_JJLS01000267.1	RefSeq	gene	6223	7845	.	-	.	ID=gene-AC56_RS04670;Name=yhiJ;gbkey=Gene;gene=yhiJ;gene_biotype=protein_coding;locus_tag=AC56_RS04670;old_locus_tag=AC56_3887
NZ_JJLS01000267.1	Protein Homology	CDS	6223	7845	.	-	0	ID=cds-WP_001300550.1;Parent=gene-AC56_RS04670;Dbxref=GenBank:WP_001300550.1;Name=WP_001300550.1;gbkey=CDS;gene=yhiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417945.1;locus_tag=AC56_RS04670;product=YhiJ/YhiL family protein;protein_id=WP_001300550.1;transl_table=11
NZ_JJLS01000267.1	RefSeq	pseudogene	8107	9713	.	-	.	ID=gene-AC56_RS04665;Name=AC56_RS04665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS04665;old_locus_tag=AC56_3888;pseudo=true
NZ_JJLS01000267.1	Protein Homology	CDS	8107	9713	.	-	0	ID=cds-AC56_RS04665;Parent=gene-AC56_RS04665;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016248132.1;locus_tag=AC56_RS04665;product=YhiJ/YhiL family protein;pseudo=true;transl_table=11
NZ_JJLS01000267.1	RefSeq	gene	10096	11148	.	+	.	ID=gene-AC56_RS04655;Name=yhiM;gbkey=Gene;gene=yhiM;gene_biotype=protein_coding;locus_tag=AC56_RS04655;old_locus_tag=AC56_3890
NZ_JJLS01000267.1	Protein Homology	CDS	10096	11148	.	+	0	ID=cds-WP_032279094.1;Parent=gene-AC56_RS04655;Dbxref=GenBank:WP_032279094.1;Name=WP_032279094.1;gbkey=CDS;gene=yhiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417948.4;locus_tag=AC56_RS04655;product=DUF2776 domain-containing protein;protein_id=WP_032279094.1;transl_table=11
NZ_JJLS01000267.1	RefSeq	gene	11463	12665	.	-	.	ID=gene-AC56_RS04650;Name=yhiN;gbkey=Gene;gene=yhiN;gene_biotype=protein_coding;locus_tag=AC56_RS04650;old_locus_tag=AC56_3891
NZ_JJLS01000267.1	Protein Homology	CDS	11463	12665	.	-	0	ID=cds-WP_000439197.1;Parent=gene-AC56_RS04650;Dbxref=GenBank:WP_000439197.1;Name=WP_000439197.1;Ontology_term=GO:0050660,GO:0050661;gbkey=CDS;gene=yhiN;go_function=flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417949.1;locus_tag=AC56_RS04650;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_000439197.1;transl_table=11
NZ_JJLS01000267.1	RefSeq	gene	12897	14396	.	+	.	ID=gene-AC56_RS04645;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=AC56_RS04645;old_locus_tag=AC56_3892
NZ_JJLS01000267.1	Protein Homology	CDS	12897	14396	.	+	0	ID=cds-WP_001397239.1;Parent=gene-AC56_RS04645;Dbxref=GenBank:WP_001397239.1;Name=WP_001397239.1;Ontology_term=GO:0006817,GO:0016020;gbkey=CDS;gene=pitA;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312392.1;locus_tag=AC56_RS04645;product=inorganic phosphate transporter PitA;protein_id=WP_001397239.1;transl_table=11
##sequence-region NZ_JJLS01000268.1 1 14403
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000268.1	RefSeq	region	1	14403	.	+	.	ID=NZ_JJLS01000268.1:1..14403;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000268.1	RefSeq	gene	1	1394	.	+	.	ID=gene-AC56_RS04640;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=AC56_RS04640;old_locus_tag=AC56_3894;partial=true;start_range=.,1
NZ_JJLS01000268.1	Protein Homology	CDS	1	1394	.	+	2	ID=cds-WP_032282892.1;Parent=gene-AC56_RS04640;Dbxref=GenBank:WP_032282892.1;Name=WP_032282892.1;Ontology_term=GO:0006817,GO:0016020;gbkey=CDS;gene=pitA;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312392.1;locus_tag=AC56_RS04640;partial=true;product=inorganic phosphate transporter PitA;protein_id=WP_032282892.1;start_range=.,1;transl_table=11
NZ_JJLS01000268.1	RefSeq	gene	1638	1973	.	-	.	ID=gene-AC56_RS0127115;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=AC56_RS0127115;old_locus_tag=AC56_3896
NZ_JJLS01000268.1	Protein Homology	CDS	1638	1973	.	-	0	ID=cds-WP_000626187.1;Parent=gene-AC56_RS0127115;Dbxref=GenBank:WP_000626187.1;Name=WP_000626187.1;gbkey=CDS;gene=uspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312393.1;locus_tag=AC56_RS0127115;product=universal stress protein UspB;protein_id=WP_000626187.1;transl_table=11
NZ_JJLS01000268.1	RefSeq	gene	2364	2798	.	+	.	ID=gene-AC56_RS04635;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=AC56_RS04635;old_locus_tag=AC56_3897
NZ_JJLS01000268.1	Protein Homology	CDS	2364	2798	.	+	0	ID=cds-WP_000323571.1;Parent=gene-AC56_RS04635;Dbxref=GenBank:WP_000323571.1;Name=WP_000323571.1;gbkey=CDS;gene=uspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312394.1;locus_tag=AC56_RS04635;product=universal stress protein UspA;protein_id=WP_000323571.1;transl_table=11
NZ_JJLS01000268.1	RefSeq	gene	2897	2950	.	-	.	ID=gene-AC56_RS33410;Name=AC56_RS33410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33410
NZ_JJLS01000268.1	Protein Homology	CDS	2897	2950	.	-	0	ID=cds-WP_212591402.1;Parent=gene-AC56_RS33410;Dbxref=GenBank:WP_212591402.1;Name=WP_212591402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051205.1;locus_tag=AC56_RS33410;product=hypothetical protein;protein_id=WP_212591402.1;transl_table=11
NZ_JJLS01000268.1	RefSeq	gene	3116	4585	.	+	.	ID=gene-AC56_RS04630;Name=dtpB;gbkey=Gene;gene=dtpB;gene_biotype=protein_coding;locus_tag=AC56_RS04630;old_locus_tag=AC56_3898
NZ_JJLS01000268.1	Protein Homology	CDS	3116	4585	.	+	0	ID=cds-WP_032279096.1;Parent=gene-AC56_RS04630;Dbxref=GenBank:WP_032279096.1;Name=WP_032279096.1;gbkey=CDS;gene=dtpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417953.1;locus_tag=AC56_RS04630;product=dipeptide/tripeptide permease DtpB;protein_id=WP_032279096.1;transl_table=11
NZ_JJLS01000268.1	RefSeq	gene	4634	5386	.	-	.	ID=gene-AC56_RS04625;Name=rsmJ;gbkey=Gene;gene=rsmJ;gene_biotype=protein_coding;locus_tag=AC56_RS04625;old_locus_tag=AC56_3899
NZ_JJLS01000268.1	Protein Homology	CDS	4634	5386	.	-	0	ID=cds-WP_000686627.1;Parent=gene-AC56_RS04625;Dbxref=GenBank:WP_000686627.1;Name=WP_000686627.1;Ontology_term=GO:0031167,GO:0008990;gbkey=CDS;gene=rsmJ;go_function=rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312396.1;locus_tag=AC56_RS04625;product=16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ;protein_id=WP_000686627.1;transl_table=11
NZ_JJLS01000268.1	RefSeq	gene	5394	7436	.	-	.	ID=gene-AC56_RS04620;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=protein_coding;locus_tag=AC56_RS04620;old_locus_tag=AC56_3900
NZ_JJLS01000268.1	Protein Homology	CDS	5394	7436	.	-	0	ID=cds-WP_001295214.1;Parent=gene-AC56_RS04620;Dbxref=GenBank:WP_001295214.1;Name=WP_001295214.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=prlC;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020317218.1;locus_tag=AC56_RS04620;product=oligopeptidase A;protein_id=WP_001295214.1;transl_table=11
NZ_JJLS01000268.1	RefSeq	gene	7639	8481	.	+	.	ID=gene-AC56_RS04615;Name=rlmJ;gbkey=Gene;gene=rlmJ;gene_biotype=protein_coding;locus_tag=AC56_RS04615;old_locus_tag=AC56_3901
NZ_JJLS01000268.1	Protein Homology	CDS	7639	8481	.	+	0	ID=cds-WP_000954225.1;Parent=gene-AC56_RS04615;Dbxref=GenBank:WP_000954225.1;Name=WP_000954225.1;gbkey=CDS;gene=rlmJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312398.1;locus_tag=AC56_RS04615;product=23S rRNA (adenine(2030)-N(6))-methyltransferase;protein_id=WP_000954225.1;transl_table=11
NZ_JJLS01000268.1	RefSeq	gene	8553	9905	.	+	.	ID=gene-AC56_RS04610;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=AC56_RS04610;old_locus_tag=AC56_3902
NZ_JJLS01000268.1	Protein Homology	CDS	8553	9905	.	+	0	ID=cds-WP_016241686.1;Parent=gene-AC56_RS04610;Dbxref=GenBank:WP_016241686.1;Name=WP_016241686.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=AC56_RS04610;product=glutathione-disulfide reductase;protein_id=WP_016241686.1;transl_table=11
NZ_JJLS01000268.1	RefSeq	gene	9959	10042	.	-	.	ID=gene-AC56_RS04605;Name=dinQ;gbkey=Gene;gene=dinQ;gene_biotype=protein_coding;locus_tag=AC56_RS04605;old_locus_tag=AC56_3903
NZ_JJLS01000268.1	Protein Homology	CDS	9959	10042	.	-	0	ID=cds-WP_001295215.1;Parent=gene-AC56_RS04605;Dbxref=GenBank:WP_001295215.1;Name=WP_001295215.1;gbkey=CDS;gene=dinQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165328.2;locus_tag=AC56_RS04605;product=damage-inducible type I toxin DinQ;protein_id=WP_001295215.1;transl_table=11
NZ_JJLS01000268.1	RefSeq	gene	10782	11135	.	+	.	ID=gene-AC56_RS04595;Name=arsR;gbkey=Gene;gene=arsR;gene_biotype=protein_coding;locus_tag=AC56_RS04595;old_locus_tag=AC56_3905
NZ_JJLS01000268.1	Protein Homology	CDS	10782	11135	.	+	0	ID=cds-WP_000008955.1;Parent=gene-AC56_RS04595;Dbxref=GenBank:WP_000008955.1;Name=WP_000008955.1;gbkey=CDS;gene=arsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417958.1;locus_tag=AC56_RS04595;product=As(III)-sensing metalloregulatory transcriptional repressor ArsR;protein_id=WP_000008955.1;transl_table=11
NZ_JJLS01000268.1	RefSeq	gene	11190	12479	.	+	.	ID=gene-AC56_RS04590;Name=arsB;gbkey=Gene;gene=arsB;gene_biotype=protein_coding;locus_tag=AC56_RS04590;old_locus_tag=AC56_3906
NZ_JJLS01000268.1	Protein Homology	CDS	11190	12479	.	+	0	ID=cds-WP_021575396.1;Parent=gene-AC56_RS04590;Dbxref=GenBank:WP_021575396.1;Name=WP_021575396.1;gbkey=CDS;gene=arsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312401.1;locus_tag=AC56_RS04590;product=arsenite/antimonite:H(+) antiporter ArsB;protein_id=WP_021575396.1;transl_table=11
NZ_JJLS01000268.1	RefSeq	gene	12492	12917	.	+	.	ID=gene-AC56_RS04585;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=AC56_RS04585;old_locus_tag=AC56_3907
NZ_JJLS01000268.1	Protein Homology	CDS	12492	12917	.	+	0	ID=cds-WP_000065769.1;Parent=gene-AC56_RS04585;Dbxref=GenBank:WP_000065769.1;Name=WP_000065769.1;Ontology_term=GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417960.1;locus_tag=AC56_RS04585;product=glutaredoxin-dependent arsenate reductase;protein_id=WP_000065769.1;transl_table=11
NZ_JJLS01000268.1	RefSeq	pseudogene	13546	13990	.	+	.	ID=gene-AC56_RS0127120;Name=AC56_RS0127120;end_range=13990,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0127120;partial=true;pseudo=true
NZ_JJLS01000268.1	Protein Homology	CDS	13546	13990	.	+	0	ID=cds-AC56_RS0127120;Parent=gene-AC56_RS0127120;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=13990,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709288.1;locus_tag=AC56_RS0127120;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_JJLS01000268.1	RefSeq	gene	14140	14403	.	-	.	ID=gene-AC56_RS04580;Name=AC56_RS04580;end_range=14403,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS04580;old_locus_tag=AC56_3910;partial=true
NZ_JJLS01000268.1	Protein Homology	CDS	14140	14403	.	-	0	ID=cds-WP_032282893.1;Parent=gene-AC56_RS04580;Dbxref=GenBank:WP_032282893.1;Name=WP_032282893.1;end_range=14403,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS04580;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032282893.1;transl_table=11
##sequence-region NZ_JJLS01000269.1 1 2705
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000269.1	RefSeq	region	1	2705	.	+	.	ID=NZ_JJLS01000269.1:1..2705;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000269.1	RefSeq	pseudogene	1	413	.	-	.	ID=gene-AC56_RS04575;Name=AC56_RS04575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS04575;old_locus_tag=AC56_3911;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000269.1	Protein Homology	CDS	1	413	.	-	0	ID=cds-AC56_RS04575;Parent=gene-AC56_RS04575;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS04575;partial=true;product=IS5-like element ISKpn26 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000269.1	RefSeq	pseudogene	473	917	.	+	.	ID=gene-AC56_RS04570;Name=AC56_RS04570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS04570;old_locus_tag=AC56_3912;partial=true;pseudo=true;start_range=.,473
NZ_JJLS01000269.1	Protein Homology	CDS	473	917	.	+	0	ID=cds-AC56_RS04570;Parent=gene-AC56_RS04570;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312403.1;locus_tag=AC56_RS04570;partial=true;product=hypothetical protein;pseudo=true;start_range=.,473;transl_table=11
NZ_JJLS01000269.1	RefSeq	gene	1272	1838	.	+	.	ID=gene-AC56_RS04565;Name=slp;gbkey=Gene;gene=slp;gene_biotype=protein_coding;locus_tag=AC56_RS04565;old_locus_tag=AC56_3913
NZ_JJLS01000269.1	Protein Homology	CDS	1272	1838	.	+	0	ID=cds-WP_001057453.1-2;Parent=gene-AC56_RS04565;Dbxref=GenBank:WP_001057453.1;Name=WP_001057453.1;gbkey=CDS;gene=slp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312404.2;locus_tag=AC56_RS04565;product=outer membrane lipoprotein Slp;protein_id=WP_001057453.1;transl_table=11
NZ_JJLS01000269.1	RefSeq	pseudogene	1994	2353	.	+	.	ID=gene-AC56_RS04560;Name=AC56_RS04560;end_range=2353,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS04560;old_locus_tag=AC56_3914;partial=true;pseudo=true
NZ_JJLS01000269.1	Protein Homology	CDS	1994	2353	.	+	0	ID=cds-AC56_RS04560;Parent=gene-AC56_RS04560;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2353,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417964.1;locus_tag=AC56_RS04560;partial=true;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11
NZ_JJLS01000269.1	RefSeq	gene	2387	2705	.	+	.	ID=gene-AC56_RS0127125;Name=AC56_RS0127125;end_range=2705,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0127125;old_locus_tag=AC56_3915;partial=true
NZ_JJLS01000269.1	Protein Homology	CDS	2387	2705	.	+	0	ID=cds-WP_032287951.1;Parent=gene-AC56_RS0127125;Dbxref=GenBank:WP_032287951.1;Name=WP_032287951.1;end_range=2705,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS0127125;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032287951.1;transl_table=11
##sequence-region NZ_JJLS01000270.1 1 30814
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000270.1	RefSeq	region	1	30814	.	+	.	ID=NZ_JJLS01000270.1:1..30814;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000270.1	RefSeq	gene	1	625	.	-	.	ID=gene-AC56_RS04555;Name=AC56_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS04555;old_locus_tag=AC56_3916;partial=true;start_range=.,1
NZ_JJLS01000270.1	Protein Homology	CDS	1	625	.	-	0	ID=cds-WP_032282676.1-2;Parent=gene-AC56_RS04555;Dbxref=GenBank:WP_032282676.1;Name=WP_032282676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417965.1;locus_tag=AC56_RS04555;partial=true;product=MgtC/SapB family protein;protein_id=WP_032282676.1;start_range=.,1;transl_table=11
NZ_JJLS01000270.1	RefSeq	gene	689	1015	.	-	.	ID=gene-AC56_RS04550;Name=hdeB;gbkey=Gene;gene=hdeB;gene_biotype=protein_coding;locus_tag=AC56_RS04550;old_locus_tag=AC56_3917
NZ_JJLS01000270.1	Protein Homology	CDS	689	1015	.	-	0	ID=cds-WP_001298717.1-4;Parent=gene-AC56_RS04550;Dbxref=GenBank:WP_001298717.1;Name=WP_001298717.1;gbkey=CDS;gene=hdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417966.4;locus_tag=AC56_RS04550;product=acid-activated periplasmic chaperone HdeB;protein_id=WP_001298717.1;transl_table=11
NZ_JJLS01000270.1	RefSeq	gene	1131	1463	.	-	.	ID=gene-AC56_RS04545;Name=hdeA;gbkey=Gene;gene=hdeA;gene_biotype=protein_coding;locus_tag=AC56_RS04545;old_locus_tag=AC56_3918
NZ_JJLS01000270.1	Protein Homology	CDS	1131	1463	.	-	0	ID=cds-WP_000756550.1-4;Parent=gene-AC56_RS04545;Dbxref=GenBank:WP_000756550.1;Name=WP_000756550.1;gbkey=CDS;gene=hdeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312417.1;locus_tag=AC56_RS04545;product=acid-activated periplasmic chaperone HdeA;protein_id=WP_000756550.1;transl_table=11
NZ_JJLS01000270.1	RefSeq	gene	1718	2290	.	+	.	ID=gene-AC56_RS04540;Name=hdeD;gbkey=Gene;gene=hdeD;gene_biotype=protein_coding;locus_tag=AC56_RS04540;old_locus_tag=AC56_3919
NZ_JJLS01000270.1	Protein Homology	CDS	1718	2290	.	+	0	ID=cds-WP_000965672.1-4;Parent=gene-AC56_RS04540;Dbxref=GenBank:WP_000965672.1;Name=WP_000965672.1;gbkey=CDS;gene=hdeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312418.1;locus_tag=AC56_RS04540;product=acid-resistance protein HdeD;protein_id=WP_000965672.1;transl_table=11
NZ_JJLS01000270.1	RefSeq	gene	3089	3616	.	+	.	ID=gene-AC56_RS04535;Name=gadE;gbkey=Gene;gene=gadE;gene_biotype=protein_coding;locus_tag=AC56_RS04535;old_locus_tag=AC56_3920
NZ_JJLS01000270.1	Protein Homology	CDS	3089	3616	.	+	0	ID=cds-WP_000576690.1-4;Parent=gene-AC56_RS04535;Dbxref=GenBank:WP_000576690.1;Name=WP_000576690.1;gbkey=CDS;gene=gadE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312419.1;locus_tag=AC56_RS04535;product=acid resistance transcriptional activator GadE;protein_id=WP_000576690.1;transl_table=11
NZ_JJLS01000270.1	RefSeq	gene	3617	3895	.	-	.	ID=gene-AC56_RS0127130;Name=AC56_RS0127130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0127130
NZ_JJLS01000270.1	Protein Homology	CDS	3617	3895	.	-	0	ID=cds-WP_001205329.1-4;Parent=gene-AC56_RS0127130;Dbxref=GenBank:WP_001205329.1;Name=WP_001205329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439288.1;locus_tag=AC56_RS0127130;product=hypothetical protein;protein_id=WP_001205329.1;transl_table=11
NZ_JJLS01000270.1	RefSeq	gene	4003	5112	.	+	.	ID=gene-AC56_RS04530;Name=mdtE;gbkey=Gene;gene=mdtE;gene_biotype=protein_coding;locus_tag=AC56_RS04530;old_locus_tag=AC56_3921
NZ_JJLS01000270.1	Protein Homology	CDS	4003	5112	.	+	0	ID=cds-WP_001340474.1-4;Parent=gene-AC56_RS04530;Dbxref=GenBank:WP_001340474.1;Name=WP_001340474.1;gbkey=CDS;gene=mdtE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001081792.1;locus_tag=AC56_RS04530;product=multidrug transporter subunit MdtE;protein_id=WP_001340474.1;transl_table=11
NZ_JJLS01000270.1	RefSeq	gene	5137	8250	.	+	.	ID=gene-AC56_RS04525;Name=mdtF;gbkey=Gene;gene=mdtF;gene_biotype=protein_coding;locus_tag=AC56_RS04525;old_locus_tag=AC56_3922
NZ_JJLS01000270.1	Protein Homology	CDS	5137	8250	.	+	0	ID=cds-WP_001506351.1-4;Parent=gene-AC56_RS04525;Dbxref=GenBank:WP_001506351.1;Name=WP_001506351.1;gbkey=CDS;gene=mdtF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417971.1;locus_tag=AC56_RS04525;product=multidrug efflux pump RND permease MdtF;protein_id=WP_001506351.1;transl_table=11
NZ_JJLS01000270.1	RefSeq	gene	8613	9341	.	-	.	ID=gene-AC56_RS04520;Name=gadW;gbkey=Gene;gene=gadW;gene_biotype=protein_coding;locus_tag=AC56_RS04520;old_locus_tag=AC56_3923
NZ_JJLS01000270.1	Protein Homology	CDS	8613	9341	.	-	0	ID=cds-WP_000149999.1-4;Parent=gene-AC56_RS04520;Dbxref=GenBank:WP_000149999.1;Name=WP_000149999.1;gbkey=CDS;gene=gadW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312422.1;locus_tag=AC56_RS04520;product=acid resistance transcriptional activator GadW;protein_id=WP_000149999.1;transl_table=11
NZ_JJLS01000270.1	RefSeq	gene	9709	10533	.	-	.	ID=gene-AC56_RS04515;Name=gadX;gbkey=Gene;gene=gadX;gene_biotype=protein_coding;locus_tag=AC56_RS04515;old_locus_tag=AC56_3924
NZ_JJLS01000270.1	Protein Homology	CDS	9709	10533	.	-	0	ID=cds-WP_001191059.1-4;Parent=gene-AC56_RS04515;Dbxref=GenBank:WP_001191059.1;Name=WP_001191059.1;gbkey=CDS;gene=gadX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417973.1;locus_tag=AC56_RS04515;product=acid resistance transcriptional activator GadX;protein_id=WP_001191059.1;transl_table=11
NZ_JJLS01000270.1	RefSeq	gene	10903	12303	.	-	.	ID=gene-AC56_RS04510;Name=AC56_RS04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS04510;old_locus_tag=AC56_3925
NZ_JJLS01000270.1	Protein Homology	CDS	10903	12303	.	-	0	ID=cds-WP_000372240.1;Parent=gene-AC56_RS04510;Dbxref=GenBank:WP_000372240.1;Name=WP_000372240.1;Ontology_term=GO:0006540,GO:0004351,GO:0030170;gbkey=CDS;go_function=glutamate decarboxylase activity|0004351||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyrate shunt|0006540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417974.1;locus_tag=AC56_RS04510;product=glutamate decarboxylase;protein_id=WP_000372240.1;transl_table=11
NZ_JJLS01000270.1	RefSeq	gene	12514	13911	.	-	.	ID=gene-AC56_RS04505;Name=ccp;gbkey=Gene;gene=ccp;gene_biotype=protein_coding;locus_tag=AC56_RS04505;old_locus_tag=AC56_3926
NZ_JJLS01000270.1	Protein Homology	CDS	12514	13911	.	-	0	ID=cds-WP_000784825.1;Parent=gene-AC56_RS04505;Dbxref=GenBank:WP_000784825.1;Name=WP_000784825.1;gbkey=CDS;gene=ccp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312425.1;locus_tag=AC56_RS04505;product=cytochrome c peroxidase;protein_id=WP_000784825.1;transl_table=11
NZ_JJLS01000270.1	RefSeq	gene	14316	15965	.	+	.	ID=gene-AC56_RS04500;Name=AC56_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS04500;old_locus_tag=AC56_3927
NZ_JJLS01000270.1	Protein Homology	CDS	14316	15965	.	+	0	ID=cds-WP_032279103.1;Parent=gene-AC56_RS04500;Dbxref=GenBank:WP_032279103.1;Name=WP_032279103.1;Ontology_term=GO:0005993,GO:0004555;gbkey=CDS;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose catabolic process|0005993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709297.1;locus_tag=AC56_RS04500;product=alpha%2Calpha-trehalase;protein_id=WP_032279103.1;transl_table=11
NZ_JJLS01000270.1	RefSeq	gene	16016	16618	.	-	.	ID=gene-AC56_RS04495;Name=AC56_RS04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS04495;old_locus_tag=AC56_3928
NZ_JJLS01000270.1	Protein Homology	CDS	16016	16618	.	-	0	ID=cds-WP_001167676.1;Parent=gene-AC56_RS04495;Dbxref=GenBank:WP_001167676.1;Name=WP_001167676.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417977.1;locus_tag=AC56_RS04495;product=helix-turn-helix transcriptional regulator;protein_id=WP_001167676.1;transl_table=11
NZ_JJLS01000270.1	RefSeq	gene	17138	18037	.	+	.	ID=gene-AC56_RS04490;Name=AC56_RS04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS04490;old_locus_tag=AC56_3929
NZ_JJLS01000270.1	Protein Homology	CDS	17138	18037	.	+	0	ID=cds-WP_001338712.1;Parent=gene-AC56_RS04490;Dbxref=GenBank:WP_001338712.1;Name=WP_001338712.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417978.2;locus_tag=AC56_RS04490;product=LysR family transcriptional regulator;protein_id=WP_001338712.1;transl_table=11
NZ_JJLS01000270.1	RefSeq	gene	18086	19099	.	+	.	ID=gene-AC56_RS04485;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=AC56_RS04485;old_locus_tag=AC56_3930
NZ_JJLS01000270.1	Protein Homology	CDS	18086	19099	.	+	0	ID=cds-WP_000191237.1;Parent=gene-AC56_RS04485;Dbxref=GenBank:WP_000191237.1;Name=WP_000191237.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417979.1;locus_tag=AC56_RS04485;product=inner membrane protein YhjD;protein_id=WP_000191237.1;transl_table=11
NZ_JJLS01000270.1	RefSeq	gene	19510	20832	.	+	.	ID=gene-AC56_RS04480;Name=AC56_RS04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS04480;old_locus_tag=AC56_3931
NZ_JJLS01000270.1	Protein Homology	CDS	19510	20832	.	+	0	ID=cds-WP_001149003.1;Parent=gene-AC56_RS04480;Dbxref=GenBank:WP_001149003.1;Name=WP_001149003.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417980.1;locus_tag=AC56_RS04480;product=MFS transporter;protein_id=WP_001149003.1;transl_table=11
NZ_JJLS01000270.1	RefSeq	gene	21014	23074	.	-	.	ID=gene-AC56_RS04475;Name=AC56_RS04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS04475;old_locus_tag=AC56_3932
NZ_JJLS01000270.1	Protein Homology	CDS	21014	23074	.	-	0	ID=cds-WP_032279104.1;Parent=gene-AC56_RS04475;Dbxref=GenBank:WP_032279104.1;Name=WP_032279104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417981.2;locus_tag=AC56_RS04475;product=AsmA family protein;protein_id=WP_032279104.1;transl_table=11
NZ_JJLS01000270.1	RefSeq	gene	23144	23911	.	-	.	ID=gene-AC56_RS0127135;Name=pdeH;gbkey=Gene;gene=pdeH;gene_biotype=protein_coding;locus_tag=AC56_RS0127135;old_locus_tag=AC56_3933
NZ_JJLS01000270.1	Protein Homology	CDS	23144	23911	.	-	0	ID=cds-WP_032279105.1;Parent=gene-AC56_RS0127135;Dbxref=GenBank:WP_032279105.1;Name=WP_032279105.1;gbkey=CDS;gene=pdeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417982.2;locus_tag=AC56_RS0127135;product=cyclic-guanylate-specific phosphodiesterase;protein_id=WP_032279105.1;transl_table=11
NZ_JJLS01000270.1	RefSeq	gene	24143	25072	.	+	.	ID=gene-AC56_RS04470;Name=kdgK;gbkey=Gene;gene=kdgK;gene_biotype=protein_coding;locus_tag=AC56_RS04470;old_locus_tag=AC56_3935
NZ_JJLS01000270.1	Protein Homology	CDS	24143	25072	.	+	0	ID=cds-WP_001370183.1;Parent=gene-AC56_RS04470;Dbxref=GenBank:WP_001370183.1;Name=WP_001370183.1;gbkey=CDS;gene=kdgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417983.2;locus_tag=AC56_RS04470;product=2-dehydro-3-deoxygluconokinase;protein_id=WP_001370183.1;transl_table=11
NZ_JJLS01000270.1	RefSeq	gene	25168	26664	.	-	.	ID=gene-AC56_RS04465;Name=AC56_RS04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS04465;old_locus_tag=AC56_3936
NZ_JJLS01000270.1	Protein Homology	CDS	25168	26664	.	-	0	ID=cds-WP_001163135.1;Parent=gene-AC56_RS04465;Dbxref=GenBank:WP_001163135.1;Name=WP_001163135.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312434.1;locus_tag=AC56_RS04465;product=M16 family metallopeptidase;protein_id=WP_001163135.1;transl_table=11
NZ_JJLS01000270.1	RefSeq	gene	26885	28171	.	-	.	ID=gene-AC56_RS04460;Name=dctA;gbkey=Gene;gene=dctA;gene_biotype=protein_coding;locus_tag=AC56_RS04460;old_locus_tag=AC56_3937
NZ_JJLS01000270.1	Protein Homology	CDS	26885	28171	.	-	0	ID=cds-WP_000858214.1;Parent=gene-AC56_RS04460;Dbxref=GenBank:WP_000858214.1;Name=WP_000858214.1;gbkey=CDS;gene=dctA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417985.1;locus_tag=AC56_RS04460;product=C4-dicarboxylate transporter DctC;protein_id=WP_000858214.1;transl_table=11
NZ_JJLS01000270.1	RefSeq	gene	28354	30342	.	-	.	ID=gene-AC56_RS04455;Name=hmsP;gbkey=Gene;gene=hmsP;gene_biotype=protein_coding;locus_tag=AC56_RS04455;old_locus_tag=AC56_3939
NZ_JJLS01000270.1	Protein Homology	CDS	28354	30342	.	-	0	ID=cds-WP_001266293.1;Parent=gene-AC56_RS04455;Dbxref=GenBank:WP_001266293.1;Name=WP_001266293.1;Ontology_term=GO:0007165;gbkey=CDS;gene=hmsP;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417986.4;locus_tag=AC56_RS04455;product=biofilm formation regulator HmsP;protein_id=WP_001266293.1;transl_table=11
NZ_JJLS01000270.1	RefSeq	gene	30424	30814	.	-	.	ID=gene-AC56_RS04450;Name=AC56_RS04450;end_range=30814,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS04450;old_locus_tag=AC56_3940;partial=true
NZ_JJLS01000270.1	Protein Homology	CDS	30424	30814	.	-	1	ID=cds-WP_077756668.1;Parent=gene-AC56_RS04450;Dbxref=GenBank:WP_077756668.1;Name=WP_077756668.1;Ontology_term=GO:0030244,GO:0019867;end_range=30814,.;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026226.4;locus_tag=AC56_RS04450;partial=true;product=cellulose synthase subunit BcsC-related outer membrane protein;protein_id=WP_077756668.1;transl_table=11
##sequence-region NZ_JJLS01000271.1 1 56808
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000271.1	RefSeq	region	1	56808	.	+	.	ID=NZ_JJLS01000271.1:1..56808;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000271.1	RefSeq	gene	1	3294	.	-	.	ID=gene-AC56_RS04445;Name=bcsC;gbkey=Gene;gene=bcsC;gene_biotype=protein_coding;locus_tag=AC56_RS04445;old_locus_tag=AC56_3941;partial=true;start_range=.,1
NZ_JJLS01000271.1	Protein Homology	CDS	1	3294	.	-	0	ID=cds-WP_032282899.1;Parent=gene-AC56_RS04445;Dbxref=GenBank:WP_032282899.1;Name=WP_032282899.1;Ontology_term=GO:0030244,GO:0005515,GO:0019867;gbkey=CDS;gene=bcsC;go_component=outer membrane|0019867||IEA;go_function=protein binding|0005515||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026226.4;locus_tag=AC56_RS04445;partial=true;product=cellulose synthase complex outer membrane protein BcsC;protein_id=WP_032282899.1;start_range=.,1;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	3276	4382	.	-	.	ID=gene-AC56_RS04440;Name=bcsZ;gbkey=Gene;gene=bcsZ;gene_biotype=protein_coding;locus_tag=AC56_RS04440;old_locus_tag=AC56_3942
NZ_JJLS01000271.1	Protein Homology	CDS	3276	4382	.	-	0	ID=cds-WP_032279108.1;Parent=gene-AC56_RS04440;Dbxref=GenBank:WP_032279108.1;Name=WP_032279108.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bcsZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312438.1;locus_tag=AC56_RS04440;product=cellulose synthase complex periplasmic endoglucanase BcsZ;protein_id=WP_032279108.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	4389	6728	.	-	.	ID=gene-AC56_RS04435;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=AC56_RS04435;old_locus_tag=AC56_3943
NZ_JJLS01000271.1	Protein Homology	CDS	4389	6728	.	-	0	ID=cds-WP_032279109.1;Parent=gene-AC56_RS04435;Dbxref=GenBank:WP_032279109.1;Name=WP_032279109.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417989.1;locus_tag=AC56_RS04435;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WP_032279109.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	6739	9357	.	-	.	ID=gene-AC56_RS04430;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=AC56_RS04430;old_locus_tag=AC56_3944
NZ_JJLS01000271.1	Protein Homology	CDS	6739	9357	.	-	0	ID=cds-WP_032279110.1;Parent=gene-AC56_RS04430;Dbxref=GenBank:WP_032279110.1;Name=WP_032279110.1;Ontology_term=GO:0006011,GO:0030244,GO:0016760,GO:0035438,GO:0016020;gbkey=CDS;gene=bcsA;go_component=membrane|0016020||IEA;go_function=cellulose synthase (UDP-forming) activity|0016760||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417990.4;locus_tag=AC56_RS04430;product=UDP-forming cellulose synthase catalytic subunit;protein_id=WP_032279110.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	9354	10106	.	-	.	ID=gene-AC56_RS04425;Name=bcsQ;gbkey=Gene;gene=bcsQ;gene_biotype=protein_coding;locus_tag=AC56_RS04425;old_locus_tag=AC56_3945
NZ_JJLS01000271.1	Protein Homology	CDS	9354	10106	.	-	0	ID=cds-WP_000279528.1;Parent=gene-AC56_RS04425;Dbxref=GenBank:WP_000279528.1;Name=WP_000279528.1;gbkey=CDS;gene=bcsQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709309.1;locus_tag=AC56_RS04425;product=cellulose biosynthesis protein BcsQ;protein_id=WP_000279528.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	10118	10306	.	-	.	ID=gene-AC56_RS04420;Name=bcsR;gbkey=Gene;gene=bcsR;gene_biotype=protein_coding;locus_tag=AC56_RS04420;old_locus_tag=AC56_3946
NZ_JJLS01000271.1	Protein Homology	CDS	10118	10306	.	-	0	ID=cds-WP_001063318.1;Parent=gene-AC56_RS04420;Dbxref=GenBank:WP_001063318.1;Name=WP_001063318.1;gbkey=CDS;gene=bcsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417992.1;locus_tag=AC56_RS04420;product=cellulose biosynthesis protein BcsR;protein_id=WP_001063318.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	10579	12150	.	+	.	ID=gene-AC56_RS04415;Name=bcsE;gbkey=Gene;gene=bcsE;gene_biotype=protein_coding;locus_tag=AC56_RS04415;old_locus_tag=AC56_3947
NZ_JJLS01000271.1	Protein Homology	CDS	10579	12150	.	+	0	ID=cds-WP_001204942.1;Parent=gene-AC56_RS04415;Dbxref=GenBank:WP_001204942.1;Name=WP_001204942.1;Ontology_term=GO:0035438;gbkey=CDS;gene=bcsE;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417993.1;locus_tag=AC56_RS04415;product=cellulose biosynthesis c-di-GMP-binding protein BcsE;protein_id=WP_001204942.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	12147	12338	.	+	.	ID=gene-AC56_RS04410;Name=bcsF;gbkey=Gene;gene=bcsF;gene_biotype=protein_coding;locus_tag=AC56_RS04410;old_locus_tag=AC56_3948
NZ_JJLS01000271.1	Protein Homology	CDS	12147	12338	.	+	0	ID=cds-WP_000988308.1;Parent=gene-AC56_RS04410;Dbxref=GenBank:WP_000988308.1;Name=WP_000988308.1;Ontology_term=GO:0052324;gbkey=CDS;gene=bcsF;go_process=plant-type cell wall cellulose biosynthetic process|0052324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417994.2;locus_tag=AC56_RS04410;product=cellulose biosynthesis protein BcsF;protein_id=WP_000988308.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	pseudogene	12335	14013	.	+	.	ID=gene-AC56_RS0127145;Name=bcsG;gbkey=Gene;gene=bcsG;gene_biotype=pseudogene;locus_tag=AC56_RS0127145;pseudo=true
NZ_JJLS01000271.1	Protein Homology	CDS	12335	14013	.	+	0	ID=cds-AC56_RS0127145;Parent=gene-AC56_RS0127145;Note=frameshifted;Ontology_term=GO:0030244;gbkey=CDS;gene=bcsG;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417995.1;locus_tag=AC56_RS0127145;product=cellulose biosynthesis protein BcsG;pseudo=true;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	14100	14207	.	-	.	ID=gene-AC56_RS27835;Name=ldrD;gbkey=Gene;gene=ldrD;gene_biotype=protein_coding;locus_tag=AC56_RS27835
NZ_JJLS01000271.1	Protein Homology	CDS	14100	14207	.	-	0	ID=cds-WP_000141634.1;Parent=gene-AC56_RS27835;Dbxref=GenBank:WP_000141634.1;Name=WP_000141634.1;gbkey=CDS;gene=ldrD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026227.1;locus_tag=AC56_RS27835;product=type I toxin-antitoxin system toxic polypeptide LdrD;protein_id=WP_000141634.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	14683	15954	.	+	.	ID=gene-AC56_RS04405;Name=yhjV;gbkey=Gene;gene=yhjV;gene_biotype=protein_coding;locus_tag=AC56_RS04405;old_locus_tag=AC56_3953
NZ_JJLS01000271.1	Protein Homology	CDS	14683	15954	.	+	0	ID=cds-WP_001295225.1;Parent=gene-AC56_RS04405;Dbxref=GenBank:WP_001295225.1;Name=WP_001295225.1;Ontology_term=GO:0003333;gbkey=CDS;gene=yhjV;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417996.1;locus_tag=AC56_RS04405;product=aromatic amino acid transport family protein;protein_id=WP_001295225.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	15984	16988	.	-	.	ID=gene-AC56_RS04400;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=AC56_RS04400;old_locus_tag=AC56_3954
NZ_JJLS01000271.1	Protein Homology	CDS	15984	16988	.	-	0	ID=cds-WP_000107012.1;Parent=gene-AC56_RS04400;Dbxref=GenBank:WP_000107012.1;Name=WP_000107012.1;gbkey=CDS;gene=dppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417997.1;locus_tag=AC56_RS04400;product=dipeptide ABC transporter ATP-binding subunit DppF;protein_id=WP_000107012.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	16985	17968	.	-	.	ID=gene-AC56_RS04395;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=AC56_RS04395;old_locus_tag=AC56_3955
NZ_JJLS01000271.1	Protein Homology	CDS	16985	17968	.	-	0	ID=cds-WP_001196486.1;Parent=gene-AC56_RS04395;Dbxref=GenBank:WP_001196486.1;Name=WP_001196486.1;Ontology_term=GO:0015833,GO:0000166,GO:0005524;gbkey=CDS;gene=dppD;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312448.1;locus_tag=AC56_RS04395;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_001196486.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	17979	18881	.	-	.	ID=gene-AC56_RS04390;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=AC56_RS04390;old_locus_tag=AC56_3956
NZ_JJLS01000271.1	Protein Homology	CDS	17979	18881	.	-	0	ID=cds-WP_000084677.1;Parent=gene-AC56_RS04390;Dbxref=GenBank:WP_000084677.1;Name=WP_000084677.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426221.1;locus_tag=AC56_RS04390;product=dipeptide ABC transporter permease DppC;protein_id=WP_000084677.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	18891	19910	.	-	.	ID=gene-AC56_RS04385;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=AC56_RS04385;old_locus_tag=AC56_3957
NZ_JJLS01000271.1	Protein Homology	CDS	18891	19910	.	-	0	ID=cds-WP_000938855.1;Parent=gene-AC56_RS04385;Dbxref=GenBank:WP_000938855.1;Name=WP_000938855.1;gbkey=CDS;gene=dppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=AC56_RS04385;product=dipeptide ABC transporter permease DppB;protein_id=WP_000938855.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	19928	20155	.	+	.	ID=gene-AC56_RS33960;Name=AC56_RS33960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33960
NZ_JJLS01000271.1	GeneMarkS-2+	CDS	19928	20155	.	+	0	ID=cds-WP_000198578.1;Parent=gene-AC56_RS33960;Dbxref=GenBank:WP_000198578.1;Name=WP_000198578.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS33960;product=hypothetical protein;protein_id=WP_000198578.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	20218	21825	.	-	.	ID=gene-AC56_RS04380;Name=dppA;gbkey=Gene;gene=dppA;gene_biotype=protein_coding;locus_tag=AC56_RS04380;old_locus_tag=AC56_3959
NZ_JJLS01000271.1	Protein Homology	CDS	20218	21825	.	-	0	ID=cds-WP_001222883.1;Parent=gene-AC56_RS04380;Dbxref=GenBank:WP_001222883.1;Name=WP_001222883.1;gbkey=CDS;gene=dppA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418001.1;locus_tag=AC56_RS04380;product=dipeptide ABC transporter substrate-binding protein DppA;protein_id=WP_001222883.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	22568	22644	.	-	.	ID=gene-AC56_RS04375;Name=AC56_RS04375;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS04375;old_locus_tag=AC56_3961
NZ_JJLS01000271.1	tRNAscan-SE	tRNA	22568	22644	.	-	.	ID=rna-AC56_RS04375;Parent=gene-AC56_RS04375;anticodon=(pos:complement(22608..22610));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS04375;product=tRNA-Pro
NZ_JJLS01000271.1	tRNAscan-SE	exon	22568	22644	.	-	.	ID=exon-AC56_RS04375-1;Parent=rna-AC56_RS04375;anticodon=(pos:complement(22608..22610));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS04375;product=tRNA-Pro
NZ_JJLS01000271.1	RefSeq	gene	22736	24427	.	-	.	ID=gene-AC56_RS04370;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=protein_coding;locus_tag=AC56_RS04370;old_locus_tag=AC56_3962
NZ_JJLS01000271.1	Protein Homology	CDS	22736	24427	.	-	0	ID=cds-WP_001269197.1;Parent=gene-AC56_RS04370;Dbxref=GenBank:WP_001269197.1;Name=WP_001269197.1;Ontology_term=GO:0008484;gbkey=CDS;gene=eptB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418002.2;locus_tag=AC56_RS04370;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;protein_id=WP_001269197.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	24751	25959	.	-	.	ID=gene-AC56_RS04365;Name=yhjX;gbkey=Gene;gene=yhjX;gene_biotype=protein_coding;locus_tag=AC56_RS04365;old_locus_tag=AC56_3963
NZ_JJLS01000271.1	Protein Homology	CDS	24751	25959	.	-	0	ID=cds-WP_016241697.1;Parent=gene-AC56_RS04365;Dbxref=GenBank:WP_016241697.1;Name=WP_016241697.1;Ontology_term=GO:0015129;gbkey=CDS;gene=yhjX;go_function=lactate transmembrane transporter activity|0015129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418003.1;locus_tag=AC56_RS04365;product=L-lactate MFS transporter;protein_id=WP_016241697.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	26188	26886	.	-	.	ID=gene-AC56_RS04360;Name=yhjY;gbkey=Gene;gene=yhjY;gene_biotype=protein_coding;locus_tag=AC56_RS04360;old_locus_tag=AC56_3964
NZ_JJLS01000271.1	Protein Homology	CDS	26188	26886	.	-	0	ID=cds-WP_032279114.1;Parent=gene-AC56_RS04360;Dbxref=GenBank:WP_032279114.1;Name=WP_032279114.1;gbkey=CDS;gene=yhjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418004.4;locus_tag=AC56_RS04360;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_032279114.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	27044	27607	.	+	.	ID=gene-AC56_RS04355;Name=tag;gbkey=Gene;gene=tag;gene_biotype=protein_coding;locus_tag=AC56_RS04355;old_locus_tag=AC56_3965
NZ_JJLS01000271.1	Protein Homology	CDS	27044	27607	.	+	0	ID=cds-WP_000438953.1;Parent=gene-AC56_RS04355;Dbxref=GenBank:WP_000438953.1;Name=WP_000438953.1;gbkey=CDS;gene=tag;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418005.1;locus_tag=AC56_RS04355;product=DNA-3-methyladenine glycosylase I;protein_id=WP_000438953.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	27604	28044	.	+	.	ID=gene-AC56_RS04350;Name=yiaC;gbkey=Gene;gene=yiaC;gene_biotype=protein_coding;locus_tag=AC56_RS04350;old_locus_tag=AC56_3966
NZ_JJLS01000271.1	Protein Homology	CDS	27604	28044	.	+	0	ID=cds-WP_000617478.1;Parent=gene-AC56_RS04350;Dbxref=GenBank:WP_000617478.1;Name=WP_000617478.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yiaC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709328.1;locus_tag=AC56_RS04350;product=N-acetyltransferase;protein_id=WP_000617478.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	28013	30346	.	-	.	ID=gene-AC56_RS04345;Name=bisC;gbkey=Gene;gene=bisC;gene_biotype=protein_coding;locus_tag=AC56_RS04345;old_locus_tag=AC56_3967
NZ_JJLS01000271.1	Protein Homology	CDS	28013	30346	.	-	0	ID=cds-WP_000013947.1;Parent=gene-AC56_RS04345;Dbxref=GenBank:WP_000013947.1;Name=WP_000013947.1;gbkey=CDS;gene=bisC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418007.3;locus_tag=AC56_RS04345;product=biotin sulfoxide reductase;protein_id=WP_000013947.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	30499	31158	.	+	.	ID=gene-AC56_RS04340;Name=yiaD;gbkey=Gene;gene=yiaD;gene_biotype=protein_coding;locus_tag=AC56_RS04340;old_locus_tag=AC56_3968
NZ_JJLS01000271.1	Protein Homology	CDS	30499	31158	.	+	0	ID=cds-WP_000747625.1;Parent=gene-AC56_RS04340;Dbxref=GenBank:WP_000747625.1;Name=WP_000747625.1;Ontology_term=GO:0009279;gbkey=CDS;gene=yiaD;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312464.1;locus_tag=AC56_RS04340;product=OmpA family lipoprotein;protein_id=WP_000747625.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	31262	32236	.	+	.	ID=gene-AC56_RS04335;Name=ghrB;gbkey=Gene;gene=ghrB;gene_biotype=protein_coding;locus_tag=AC56_RS04335;old_locus_tag=AC56_3969
NZ_JJLS01000271.1	Protein Homology	CDS	31262	32236	.	+	0	ID=cds-WP_032279116.1;Parent=gene-AC56_RS04335;Dbxref=GenBank:WP_032279116.1;Name=WP_032279116.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=ghrB;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312465.2;locus_tag=AC56_RS04335;product=glyoxylate/hydroxypyruvate reductase GhrB;protein_id=WP_032279116.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	32286	32996	.	-	.	ID=gene-AC56_RS04330;Name=yiaF;gbkey=Gene;gene=yiaF;gene_biotype=protein_coding;locus_tag=AC56_RS04330;old_locus_tag=AC56_3970
NZ_JJLS01000271.1	Protein Homology	CDS	32286	32996	.	-	0	ID=cds-WP_000190516.1;Parent=gene-AC56_RS04330;Dbxref=GenBank:WP_000190516.1;Name=WP_000190516.1;gbkey=CDS;gene=yiaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418010.2;locus_tag=AC56_RS04330;product=DUF3053 domain-containing protein;protein_id=WP_000190516.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	33430	33720	.	+	.	ID=gene-AC56_RS04325;Name=yiaG;gbkey=Gene;gene=yiaG;gene_biotype=protein_coding;locus_tag=AC56_RS04325;old_locus_tag=AC56_3971
NZ_JJLS01000271.1	Protein Homology	CDS	33430	33720	.	+	0	ID=cds-WP_000455798.1;Parent=gene-AC56_RS04325;Dbxref=GenBank:WP_000455798.1;Name=WP_000455798.1;gbkey=CDS;gene=yiaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312467.1;locus_tag=AC56_RS04325;product=HTH-type transcriptional regulator;protein_id=WP_000455798.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	34001	34213	.	+	.	ID=gene-AC56_RS04320;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=AC56_RS04320;old_locus_tag=AC56_3972
NZ_JJLS01000271.1	Protein Homology	CDS	34001	34213	.	+	0	ID=cds-WP_000014594.1;Parent=gene-AC56_RS04320;Dbxref=GenBank:WP_000014594.1;Name=WP_000014594.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312468.1;locus_tag=AC56_RS04320;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000014594.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	34352	34423	.	+	.	ID=gene-AC56_RS33415;Name=ysaE;gbkey=Gene;gene=ysaE;gene_biotype=protein_coding;locus_tag=AC56_RS33415
NZ_JJLS01000271.1	Protein Homology	CDS	34352	34423	.	+	0	ID=cds-WP_211180513.1;Parent=gene-AC56_RS33415;Dbxref=GenBank:WP_211180513.1;Name=WP_211180513.1;gbkey=CDS;gene=ysaE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051206.1;locus_tag=AC56_RS33415;product=protein YsaE;protein_id=WP_211180513.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	34400	34552	.	-	.	ID=gene-AC56_RS04315;Name=hokA;gbkey=Gene;gene=hokA;gene_biotype=protein_coding;locus_tag=AC56_RS04315;old_locus_tag=AC56_3973
NZ_JJLS01000271.1	Protein Homology	CDS	34400	34552	.	-	0	ID=cds-WP_001135732.1;Parent=gene-AC56_RS04315;Dbxref=GenBank:WP_001135732.1;Name=WP_001135732.1;gbkey=CDS;gene=hokA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540334.1;locus_tag=AC56_RS04315;product=type I toxin-antitoxin system toxin HokA;protein_id=WP_001135732.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	34833	36902	.	-	.	ID=gene-AC56_RS04310;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=AC56_RS04310;old_locus_tag=AC56_3974
NZ_JJLS01000271.1	Protein Homology	CDS	34833	36902	.	-	0	ID=cds-WP_001291772.1;Parent=gene-AC56_RS04310;Dbxref=GenBank:WP_001291772.1;Name=WP_001291772.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=AC56_RS04310;product=glycine--tRNA ligase subunit beta;protein_id=WP_001291772.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	36912	37823	.	-	.	ID=gene-AC56_RS04305;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=AC56_RS04305;old_locus_tag=AC56_3975
NZ_JJLS01000271.1	Protein Homology	CDS	36912	37823	.	-	0	ID=cds-WP_001168544.1;Parent=gene-AC56_RS04305;Dbxref=GenBank:WP_001168544.1;Name=WP_001168544.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyQ;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312470.1;locus_tag=AC56_RS04305;product=glycine--tRNA ligase subunit alpha;protein_id=WP_001168544.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	37918	38217	.	-	.	ID=gene-AC56_RS04300;Name=ysaB;gbkey=Gene;gene=ysaB;gene_biotype=protein_coding;locus_tag=AC56_RS04300;old_locus_tag=AC56_3976
NZ_JJLS01000271.1	Protein Homology	CDS	37918	38217	.	-	0	ID=cds-WP_000980107.1;Parent=gene-AC56_RS04300;Dbxref=GenBank:WP_000980107.1;Name=WP_000980107.1;gbkey=CDS;gene=ysaB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588469.1;locus_tag=AC56_RS04300;product=YsaB family lipoprotein;protein_id=WP_000980107.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	38392	39387	.	+	.	ID=gene-AC56_RS04295;Name=wecH;gbkey=Gene;gene=wecH;gene_biotype=protein_coding;locus_tag=AC56_RS04295;old_locus_tag=AC56_3977
NZ_JJLS01000271.1	Protein Homology	CDS	38392	39387	.	+	0	ID=cds-WP_032279117.1;Parent=gene-AC56_RS04295;Dbxref=GenBank:WP_032279117.1;Name=WP_032279117.1;gbkey=CDS;gene=wecH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709348.1;locus_tag=AC56_RS04295;product=O-acetyltransferase WecH;protein_id=WP_032279117.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	39429	39866	.	-	.	ID=gene-AC56_RS04290;Name=yiaA;gbkey=Gene;gene=yiaA;gene_biotype=protein_coding;locus_tag=AC56_RS04290;old_locus_tag=AC56_3978
NZ_JJLS01000271.1	Protein Homology	CDS	39429	39866	.	-	0	ID=cds-WP_001296808.1;Parent=gene-AC56_RS04290;Dbxref=GenBank:WP_001296808.1;Name=WP_001296808.1;gbkey=CDS;gene=yiaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312472.2;locus_tag=AC56_RS04290;product=inner membrane protein YiaA;protein_id=WP_001296808.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	39912	40253	.	-	.	ID=gene-AC56_RS04285;Name=yiaB;gbkey=Gene;gene=yiaB;gene_biotype=protein_coding;locus_tag=AC56_RS04285;old_locus_tag=AC56_3979
NZ_JJLS01000271.1	Protein Homology	CDS	39912	40253	.	-	0	ID=cds-WP_001295228.1;Parent=gene-AC56_RS04285;Dbxref=GenBank:WP_001295228.1;Name=WP_001295228.1;gbkey=CDS;gene=yiaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418020.2;locus_tag=AC56_RS04285;product=inner membrane protein YiaB;protein_id=WP_001295228.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	40422	41876	.	-	.	ID=gene-AC56_RS04280;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=AC56_RS04280;old_locus_tag=AC56_3980
NZ_JJLS01000271.1	Protein Homology	CDS	40422	41876	.	-	0	ID=cds-WP_000275381.1;Parent=gene-AC56_RS04280;Dbxref=GenBank:WP_000275381.1;Name=WP_000275381.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418021.1;locus_tag=AC56_RS04280;product=xylulokinase;protein_id=WP_000275381.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	41948	43270	.	-	.	ID=gene-AC56_RS04275;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=AC56_RS04275;old_locus_tag=AC56_3981
NZ_JJLS01000271.1	Protein Homology	CDS	41948	43270	.	-	0	ID=cds-WP_001426367.1;Parent=gene-AC56_RS04275;Dbxref=GenBank:WP_001426367.1;Name=WP_001426367.1;Ontology_term=GO:0042732,GO:0009045;gbkey=CDS;gene=xylA;go_function=xylose isomerase activity|0009045||IEA;go_process=D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312475.1;locus_tag=AC56_RS04275;product=xylose isomerase;protein_id=WP_001426367.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	43636	44628	.	+	.	ID=gene-AC56_RS04270;Name=xylF;gbkey=Gene;gene=xylF;gene_biotype=protein_coding;locus_tag=AC56_RS04270;old_locus_tag=AC56_3982
NZ_JJLS01000271.1	Protein Homology	CDS	43636	44628	.	+	0	ID=cds-WP_032279119.1;Parent=gene-AC56_RS04270;Dbxref=GenBank:WP_032279119.1;Name=WP_032279119.1;Ontology_term=GO:0015753;gbkey=CDS;gene=xylF;go_process=D-xylose transmembrane transport|0015753||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312476.1;locus_tag=AC56_RS04270;product=D-xylose ABC transporter substrate-binding protein;protein_id=WP_032279119.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	44706	46247	.	+	.	ID=gene-AC56_RS04265;Name=xylG;gbkey=Gene;gene=xylG;gene_biotype=protein_coding;locus_tag=AC56_RS04265;old_locus_tag=AC56_3983
NZ_JJLS01000271.1	Protein Homology	CDS	44706	46247	.	+	0	ID=cds-WP_032279121.1;Parent=gene-AC56_RS04265;Dbxref=GenBank:WP_032279121.1;Name=WP_032279121.1;Ontology_term=GO:0015753,GO:0005524,GO:0015614,GO:0016020;gbkey=CDS;gene=xylG;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-xylose transporter activity|0015614||IEA;go_process=D-xylose transmembrane transport|0015753||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312477.1;locus_tag=AC56_RS04265;product=D-xylose ABC transporter ATP-binding protein;protein_id=WP_032279121.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	46225	47406	.	+	.	ID=gene-AC56_RS04260;Name=xylH;gbkey=Gene;gene=xylH;gene_biotype=protein_coding;locus_tag=AC56_RS04260;old_locus_tag=AC56_3984
NZ_JJLS01000271.1	Protein Homology	CDS	46225	47406	.	+	0	ID=cds-WP_000045978.1;Parent=gene-AC56_RS04260;Dbxref=GenBank:WP_000045978.1;Name=WP_000045978.1;gbkey=CDS;gene=xylH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312478.1;locus_tag=AC56_RS04260;product=xylose ABC transporter permease XylH;protein_id=WP_000045978.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	47484	48662	.	+	.	ID=gene-AC56_RS04255;Name=xylR;gbkey=Gene;gene=xylR;gene_biotype=protein_coding;locus_tag=AC56_RS04255;old_locus_tag=AC56_3985
NZ_JJLS01000271.1	Protein Homology	CDS	47484	48662	.	+	0	ID=cds-WP_000494484.1;Parent=gene-AC56_RS04255;Dbxref=GenBank:WP_000494484.1;Name=WP_000494484.1;Note=D-xylose enhances binding of XylR to the xyl promoter and activates transcription.;gbkey=CDS;gene=xylR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312479.1;locus_tag=AC56_RS04255;product=D-xylose utilization transcriptional activator XylR;protein_id=WP_000494484.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	48858	49682	.	-	.	ID=gene-AC56_RS0127170;Name=bax;gbkey=Gene;gene=bax;gene_biotype=protein_coding;locus_tag=AC56_RS0127170;old_locus_tag=AC56_3986
NZ_JJLS01000271.1	Protein Homology	CDS	48858	49682	.	-	0	ID=cds-WP_001297957.1;Parent=gene-AC56_RS0127170;Dbxref=GenBank:WP_001297957.1;Name=WP_001297957.1;gbkey=CDS;gene=bax;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026230.1;locus_tag=AC56_RS0127170;product=protein bax;protein_id=WP_001297957.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	50002	52032	.	+	.	ID=gene-AC56_RS04250;Name=malS;gbkey=Gene;gene=malS;gene_biotype=protein_coding;locus_tag=AC56_RS04250;old_locus_tag=AC56_3987
NZ_JJLS01000271.1	Protein Homology	CDS	50002	52032	.	+	0	ID=cds-WP_032279122.1;Parent=gene-AC56_RS04250;Dbxref=GenBank:WP_032279122.1;Name=WP_032279122.1;Ontology_term=GO:0004556;gbkey=CDS;gene=malS;go_function=alpha-amylase activity|0004556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418028.1;locus_tag=AC56_RS04250;product=alpha-amylase;protein_id=WP_032279122.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	52210	53463	.	+	.	ID=gene-AC56_RS04245;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=AC56_RS04245;old_locus_tag=AC56_3988
NZ_JJLS01000271.1	Protein Homology	CDS	52210	53463	.	+	0	ID=cds-WP_000144361.1;Parent=gene-AC56_RS04245;Dbxref=GenBank:WP_000144361.1;Name=WP_000144361.1;gbkey=CDS;gene=avtA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026231.1;locus_tag=AC56_RS04245;product=valine--pyruvate transaminase;protein_id=WP_000144361.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	53614	54087	.	-	.	ID=gene-AC56_RS04240;Name=ysaA;gbkey=Gene;gene=ysaA;gene_biotype=protein_coding;locus_tag=AC56_RS04240;old_locus_tag=AC56_3989
NZ_JJLS01000271.1	Protein Homology	CDS	53614	54087	.	-	0	ID=cds-WP_001295229.1;Parent=gene-AC56_RS04240;Dbxref=GenBank:WP_001295229.1;Name=WP_001295229.1;gbkey=CDS;gene=ysaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312483.1;locus_tag=AC56_RS04240;product=4Fe-4S binding protein;protein_id=WP_001295229.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	54189	55037	.	-	.	ID=gene-AC56_RS04235;Name=yiaJ;gbkey=Gene;gene=yiaJ;gene_biotype=protein_coding;locus_tag=AC56_RS04235;old_locus_tag=AC56_3990
NZ_JJLS01000271.1	Protein Homology	CDS	54189	55037	.	-	0	ID=cds-WP_000514240.1;Parent=gene-AC56_RS04235;Dbxref=GenBank:WP_000514240.1;Name=WP_000514240.1;gbkey=CDS;gene=yiaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418031.1;locus_tag=AC56_RS04235;product=IclR family transcriptional regulator YiaJ;protein_id=WP_000514240.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	gene	55239	56237	.	+	.	ID=gene-AC56_RS04230;Name=yiaK;gbkey=Gene;gene=yiaK;gene_biotype=protein_coding;locus_tag=AC56_RS04230;old_locus_tag=AC56_3991
NZ_JJLS01000271.1	Protein Homology	CDS	55239	56237	.	+	0	ID=cds-WP_032279124.1;Parent=gene-AC56_RS04230;Dbxref=GenBank:WP_032279124.1;Name=WP_032279124.1;Ontology_term=GO:0047559,GO:0070403;gbkey=CDS;gene=yiaK;go_function=3-dehydro-L-gulonate 2-dehydrogenase activity|0047559||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418032.1;locus_tag=AC56_RS04230;product=3-dehydro-L-gulonate 2-dehydrogenase;protein_id=WP_032279124.1;transl_table=11
NZ_JJLS01000271.1	RefSeq	pseudogene	56249	56419	.	+	.	ID=gene-AC56_RS04225;Name=AC56_RS04225;end_range=56419,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS04225;old_locus_tag=AC56_3992;partial=true;pseudo=true
NZ_JJLS01000271.1	Protein Homology	CDS	56249	56419	.	+	0	ID=cds-AC56_RS04225;Parent=gene-AC56_RS04225;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=56419,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418033.1;locus_tag=AC56_RS04225;partial=true;product=YhcH/YjgK/YiaL family protein;pseudo=true;transl_table=11
NZ_JJLS01000271.1	RefSeq	pseudogene	56475	56808	.	+	.	ID=gene-AC56_RS0127180;Name=AC56_RS0127180;end_range=56808,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0127180;partial=true;pseudo=true
NZ_JJLS01000271.1	Protein Homology	CDS	56475	56808	.	+	0	ID=cds-AC56_RS0127180;Parent=gene-AC56_RS0127180;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=56808,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS0127180;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000272.1 1 7340
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000272.1	RefSeq	region	1	7340	.	+	.	ID=NZ_JJLS01000272.1:1..7340;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000272.1	RefSeq	gene	1	378	.	+	.	ID=gene-AC56_RS04220;Name=AC56_RS04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS04220;old_locus_tag=AC56_3994;partial=true;start_range=.,1
NZ_JJLS01000272.1	Protein Homology	CDS	1	378	.	+	0	ID=cds-WP_001513096.1;Parent=gene-AC56_RS04220;Dbxref=GenBank:WP_001513096.1;Name=WP_001513096.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS04220;partial=true;product=IS1 family transposase;protein_id=WP_001513096.1;start_range=.,1;transl_table=11
NZ_JJLS01000272.1	RefSeq	pseudogene	394	585	.	-	.	ID=gene-AC56_RS30300;Name=AC56_RS30300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS30300;partial=true;pseudo=true;start_range=.,394
NZ_JJLS01000272.1	Protein Homology	CDS	394	585	.	-	0	ID=cds-AC56_RS30300;Parent=gene-AC56_RS30300;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709367.1;locus_tag=AC56_RS30300;partial=true;product=L-threonine dehydrogenase;pseudo=true;start_range=.,394;transl_table=11
NZ_JJLS01000272.1	RefSeq	gene	775	2619	.	-	.	ID=gene-AC56_RS04215;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=AC56_RS04215;old_locus_tag=AC56_3995
NZ_JJLS01000272.1	Protein Homology	CDS	775	2619	.	-	0	ID=cds-WP_032279128.1;Parent=gene-AC56_RS04215;Dbxref=GenBank:WP_032279128.1;Name=WP_032279128.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=selB;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418047.1;locus_tag=AC56_RS04215;product=selenocysteine-specific translation elongation factor;protein_id=WP_032279128.1;transl_table=11
NZ_JJLS01000272.1	RefSeq	gene	2616	4007	.	-	.	ID=gene-AC56_RS04210;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=AC56_RS04210;old_locus_tag=AC56_3996
NZ_JJLS01000272.1	Protein Homology	CDS	2616	4007	.	-	0	ID=cds-WP_032279129.1;Parent=gene-AC56_RS04210;Dbxref=GenBank:WP_032279129.1;Name=WP_032279129.1;Ontology_term=GO:0001514,GO:0004125,GO:0005737;gbkey=CDS;gene=selA;go_component=cytoplasm|0005737||IEA;go_function=L-seryl-tRNA(Sec) selenium transferase activity|0004125||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312495.1;locus_tag=AC56_RS04210;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_032279129.1;transl_table=11
NZ_JJLS01000272.1	RefSeq	gene	4105	4713	.	-	.	ID=gene-AC56_RS04205;Name=yibF;gbkey=Gene;gene=yibF;gene_biotype=protein_coding;locus_tag=AC56_RS04205;old_locus_tag=AC56_3997
NZ_JJLS01000272.1	Protein Homology	CDS	4105	4713	.	-	0	ID=cds-WP_000779792.1;Parent=gene-AC56_RS04205;Dbxref=GenBank:WP_000779792.1;Name=WP_000779792.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yibF;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418049.1;locus_tag=AC56_RS04205;product=glutathione S-transferase;protein_id=WP_000779792.1;transl_table=11
NZ_JJLS01000272.1	RefSeq	pseudogene	4942	7340	.	+	.	ID=gene-AC56_RS04200;Name=rhsB;end_range=7340,.;gbkey=Gene;gene=rhsB;gene_biotype=pseudogene;locus_tag=AC56_RS04200;old_locus_tag=AC56_3999;partial=true;pseudo=true
NZ_JJLS01000272.1	Protein Homology	CDS	4942	7340	.	+	0	ID=cds-AC56_RS04200;Parent=gene-AC56_RS04200;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=7340,.;gbkey=CDS;gene=rhsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418050.1;locus_tag=AC56_RS04200;partial=true;product=rhs element protein RhsB;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000273.1 1 375
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000273.1	RefSeq	region	1	375	.	+	.	ID=NZ_JJLS01000273.1:1..375;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000273.1	RefSeq	gene	1	375	.	+	.	ID=gene-AC56_RS04195;Name=AC56_RS04195;end_range=375,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS04195;old_locus_tag=AC56_4000;partial=true;start_range=.,1
NZ_JJLS01000273.1	Protein Homology	CDS	1	375	.	+	1	ID=cds-WP_032282903.1;Parent=gene-AC56_RS04195;Dbxref=GenBank:WP_032282903.1;Name=WP_032282903.1;end_range=375,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418050.1;locus_tag=AC56_RS04195;partial=true;product=RHS repeat-associated core domain-containing protein;protein_id=WP_032282903.1;start_range=.,1;transl_table=11
##sequence-region NZ_JJLS01000274.1 1 12280
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000274.1	RefSeq	region	1	12280	.	+	.	ID=NZ_JJLS01000274.1:1..12280;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000274.1	RefSeq	pseudogene	1	391	.	+	.	ID=gene-AC56_RS04190;Name=AC56_RS04190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS04190;old_locus_tag=AC56_4001;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000274.1	Protein Homology	CDS	1	391	.	+	1	ID=cds-AC56_RS04190;Parent=gene-AC56_RS04190;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS04190;partial=true;product=IS5-like element IS903B family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000274.1	RefSeq	pseudogene	448	708	.	+	.	ID=gene-AC56_RS30305;Name=AC56_RS30305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS30305;partial=true;pseudo=true;start_range=.,448
NZ_JJLS01000274.1	Protein Homology	CDS	448	708	.	+	0	ID=cds-AC56_RS30305;Parent=gene-AC56_RS30305;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418050.1;locus_tag=AC56_RS30305;partial=true;product=polymorphic toxin type 34 domain-containing protein;pseudo=true;start_range=.,448;transl_table=11
NZ_JJLS01000274.1	RefSeq	gene	729	1571	.	+	.	ID=gene-AC56_RS04185;Name=yibA;gbkey=Gene;gene=yibA;gene_biotype=protein_coding;locus_tag=AC56_RS04185;old_locus_tag=AC56_4002
NZ_JJLS01000274.1	Protein Homology	CDS	729	1571	.	+	0	ID=cds-WP_000072850.1;Parent=gene-AC56_RS04185;Dbxref=GenBank:WP_000072850.1;Name=WP_000072850.1;gbkey=CDS;gene=yibA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418051.1;locus_tag=AC56_RS04185;product=HEAT repeat domain-containing protein;protein_id=WP_000072850.1;transl_table=11
NZ_JJLS01000274.1	RefSeq	pseudogene	1601	2557	.	+	.	ID=gene-AC56_RS32850;Name=AC56_RS32850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS32850;old_locus_tag=AC56_4003;partial=true;pseudo=true;start_range=.,1601
NZ_JJLS01000274.1	Protein Homology	CDS	1601	2557	.	+	0	ID=cds-AC56_RS32850;Parent=gene-AC56_RS32850;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312497.1;locus_tag=AC56_RS32850;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,1601;transl_table=11
NZ_JJLS01000274.1	RefSeq	gene	2569	3030	.	+	.	ID=gene-AC56_RS0127185;Name=yibG;gbkey=Gene;gene=yibG;gene_biotype=protein_coding;locus_tag=AC56_RS0127185
NZ_JJLS01000274.1	Protein Homology	CDS	2569	3030	.	+	0	ID=cds-WP_000642482.1;Parent=gene-AC56_RS0127185;Dbxref=GenBank:WP_000642482.1;Name=WP_000642482.1;gbkey=CDS;gene=yibG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418053.1;locus_tag=AC56_RS0127185;product=sel1 repeat family protein;protein_id=WP_000642482.1;transl_table=11
NZ_JJLS01000274.1	RefSeq	pseudogene	3064	3282	.	+	.	ID=gene-AC56_RS33965;Name=AC56_RS33965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33965;partial=true;pseudo=true;start_range=.,3064
NZ_JJLS01000274.1	Protein Homology	CDS	3064	3282	.	+	0	ID=cds-AC56_RS33965;Parent=gene-AC56_RS33965;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016235166.1;locus_tag=AC56_RS33965;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,3064;transl_table=11
NZ_JJLS01000274.1	RefSeq	pseudogene	3654	4174	.	+	.	ID=gene-AC56_RS0127190;Name=AC56_RS0127190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0127190;pseudo=true
NZ_JJLS01000274.1	Protein Homology	CDS	3654	4174	.	+	0	ID=cds-AC56_RS0127190;Parent=gene-AC56_RS0127190;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001626253.1;locus_tag=AC56_RS0127190;product=Imm57 family immunity protein;pseudo=true;transl_table=11
NZ_JJLS01000274.1	RefSeq	gene	4633	5769	.	-	.	ID=gene-AC56_RS04175;Name=yibH;gbkey=Gene;gene=yibH;gene_biotype=protein_coding;locus_tag=AC56_RS04175;old_locus_tag=AC56_4004
NZ_JJLS01000274.1	Protein Homology	CDS	4633	5769	.	-	0	ID=cds-WP_000364939.1;Parent=gene-AC56_RS04175;Dbxref=GenBank:WP_000364939.1;Name=WP_000364939.1;gbkey=CDS;gene=yibH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312500.1;locus_tag=AC56_RS04175;product=HlyD family secretion protein;protein_id=WP_000364939.1;transl_table=11
NZ_JJLS01000274.1	RefSeq	gene	5772	6134	.	-	.	ID=gene-AC56_RS04170;Name=yibI;gbkey=Gene;gene=yibI;gene_biotype=protein_coding;locus_tag=AC56_RS04170;old_locus_tag=AC56_4005
NZ_JJLS01000274.1	Protein Homology	CDS	5772	6134	.	-	0	ID=cds-WP_001375533.1;Parent=gene-AC56_RS04170;Dbxref=GenBank:WP_001375533.1;Name=WP_001375533.1;gbkey=CDS;gene=yibI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312501.1;locus_tag=AC56_RS04170;product=DUF3302 domain-containing protein;protein_id=WP_001375533.1;transl_table=11
NZ_JJLS01000274.1	RefSeq	gene	6671	8584	.	+	.	ID=gene-AC56_RS04165;Name=mtlA;gbkey=Gene;gene=mtlA;gene_biotype=protein_coding;locus_tag=AC56_RS04165;old_locus_tag=AC56_4006
NZ_JJLS01000274.1	Protein Homology	CDS	6671	8584	.	+	0	ID=cds-WP_000093258.1;Parent=gene-AC56_RS04165;Dbxref=GenBank:WP_000093258.1;Name=WP_000093258.1;gbkey=CDS;gene=mtlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709373.1;locus_tag=AC56_RS04165;product=PTS mannitol transporter subunit IICBA;protein_id=WP_000093258.1;transl_table=11
NZ_JJLS01000274.1	RefSeq	gene	8814	9962	.	+	.	ID=gene-AC56_RS04160;Name=mtlD;gbkey=Gene;gene=mtlD;gene_biotype=protein_coding;locus_tag=AC56_RS04160;old_locus_tag=AC56_4007
NZ_JJLS01000274.1	Protein Homology	CDS	8814	9962	.	+	0	ID=cds-WP_000645405.1;Parent=gene-AC56_RS04160;Dbxref=GenBank:WP_000645405.1;Name=WP_000645405.1;Ontology_term=GO:0019594,GO:0008926;gbkey=CDS;gene=mtlD;go_function=mannitol-1-phosphate 5-dehydrogenase activity|0008926||IEA;go_process=mannitol metabolic process|0019594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312503.1;locus_tag=AC56_RS04160;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_000645405.1;transl_table=11
NZ_JJLS01000274.1	RefSeq	gene	9962	10549	.	+	.	ID=gene-AC56_RS04155;Name=mtlR;gbkey=Gene;gene=mtlR;gene_biotype=protein_coding;locus_tag=AC56_RS04155;old_locus_tag=AC56_4008
NZ_JJLS01000274.1	Protein Homology	CDS	9962	10549	.	+	0	ID=cds-WP_000228271.1;Parent=gene-AC56_RS04155;Dbxref=GenBank:WP_000228271.1;Name=WP_000228271.1;gbkey=CDS;gene=mtlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312504.1;locus_tag=AC56_RS04155;product=mannitol operon repressor MtlR;protein_id=WP_000228271.1;transl_table=11
NZ_JJLS01000274.1	RefSeq	gene	10561	10770	.	-	.	ID=gene-AC56_RS04150;Name=yibT;gbkey=Gene;gene=yibT;gene_biotype=protein_coding;locus_tag=AC56_RS04150;old_locus_tag=AC56_4009
NZ_JJLS01000274.1	Protein Homology	CDS	10561	10770	.	-	0	ID=cds-WP_000517100.1;Parent=gene-AC56_RS04150;Dbxref=GenBank:WP_000517100.1;Name=WP_000517100.1;gbkey=CDS;gene=yibT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588470.1;locus_tag=AC56_RS04150;product=protein YibT;protein_id=WP_000517100.1;transl_table=11
NZ_JJLS01000274.1	RefSeq	gene	11055	11417	.	+	.	ID=gene-AC56_RS04145;Name=yibL;gbkey=Gene;gene=yibL;gene_biotype=protein_coding;locus_tag=AC56_RS04145;old_locus_tag=AC56_4010
NZ_JJLS01000274.1	Protein Homology	CDS	11055	11417	.	+	0	ID=cds-WP_000665676.1;Parent=gene-AC56_RS04145;Dbxref=GenBank:WP_000665676.1;Name=WP_000665676.1;gbkey=CDS;gene=yibL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312505.1;locus_tag=AC56_RS04145;product=YibL family ribosome-associated protein;protein_id=WP_000665676.1;transl_table=11
NZ_JJLS01000274.1	RefSeq	gene	11585	12280	.	-	.	ID=gene-AC56_RS04140;Name=AC56_RS04140;end_range=12280,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS04140;old_locus_tag=AC56_4011;partial=true
NZ_JJLS01000274.1	Protein Homology	CDS	12033	12280	.	-	1	ID=cds-WP_248790153.1;Parent=gene-AC56_RS04140;Dbxref=GenBank:WP_248790153.1;Name=WP_248790153.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;end_range=12280,.;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS04140;partial=true;product=IS1-like element IS1B family transposase;protein_id=WP_248790153.1;transl_table=11
NZ_JJLS01000274.1	Protein Homology	CDS	11585	12033	.	-	2	ID=cds-WP_248790153.1;Parent=gene-AC56_RS04140;Dbxref=GenBank:WP_248790153.1;Name=WP_248790153.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS04140;partial=true;product=IS1-like element IS1B family transposase;protein_id=WP_248790153.1;transl_table=11
##sequence-region NZ_JJLS01000275.1 1 65957
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000275.1	RefSeq	region	1	65957	.	+	.	ID=NZ_JJLS01000275.1:1..65957;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000275.1	RefSeq	pseudogene	1	572	.	-	.	ID=gene-AC56_RS04135;Name=AC56_RS04135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS04135;old_locus_tag=AC56_4012;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000275.1	Protein Homology	CDS	1	572	.	-	0	ID=cds-AC56_RS04135;Parent=gene-AC56_RS04135;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=AC56_RS04135;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000275.1	RefSeq	pseudogene	630	5453	.	+	.	ID=gene-AC56_RS04130;Name=AC56_RS04130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS04130;old_locus_tag=AC56_4013;partial=true;pseudo=true;start_range=.,630
NZ_JJLS01000275.1	Protein Homology	CDS	630	5453	.	+	0	ID=cds-AC56_RS04130;Parent=gene-AC56_RS04130;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033266.1;locus_tag=AC56_RS04130;partial=true;product=YadA-like family protein;pseudo=true;start_range=.,630;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	5880	7535	.	+	.	ID=gene-AC56_RS04125;Name=lldP;gbkey=Gene;gene=lldP;gene_biotype=protein_coding;locus_tag=AC56_RS04125;old_locus_tag=AC56_4014
NZ_JJLS01000275.1	Protein Homology	CDS	5880	7535	.	+	0	ID=cds-WP_001297977.1;Parent=gene-AC56_RS04125;Dbxref=GenBank:WP_001297977.1;Name=WP_001297977.1;Ontology_term=GO:0015727,GO:0015129,GO:0005886;gbkey=CDS;gene=lldP;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312508.1;locus_tag=AC56_RS04125;product=L-lactate permease;protein_id=WP_001297977.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	7535	8311	.	+	.	ID=gene-AC56_RS04120;Name=lldR;gbkey=Gene;gene=lldR;gene_biotype=protein_coding;locus_tag=AC56_RS04120;old_locus_tag=AC56_4015
NZ_JJLS01000275.1	Protein Homology	CDS	7535	8311	.	+	0	ID=cds-WP_032279138.1;Parent=gene-AC56_RS04120;Dbxref=GenBank:WP_032279138.1;Name=WP_032279138.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lldR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418061.1;locus_tag=AC56_RS04120;product=transcriptional regulator LldR;protein_id=WP_032279138.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	8308	9498	.	+	.	ID=gene-AC56_RS04115;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=AC56_RS04115;old_locus_tag=AC56_4016
NZ_JJLS01000275.1	Protein Homology	CDS	8308	9498	.	+	0	ID=cds-WP_000586962.1;Parent=gene-AC56_RS04115;Dbxref=GenBank:WP_000586962.1;Name=WP_000586962.1;gbkey=CDS;gene=lldD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418062.1;locus_tag=AC56_RS04115;product=quinone-dependent L-lactate dehydrogenase;protein_id=WP_000586962.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	9684	10157	.	+	.	ID=gene-AC56_RS04110;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=AC56_RS04110;old_locus_tag=AC56_4017
NZ_JJLS01000275.1	Protein Homology	CDS	9684	10157	.	+	0	ID=cds-WP_000932346.1;Parent=gene-AC56_RS04110;Dbxref=GenBank:WP_000932346.1;Name=WP_000932346.1;Ontology_term=GO:0001510,GO:0008173;gbkey=CDS;gene=trmL;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709385.1;locus_tag=AC56_RS04110;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_000932346.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	10210	11031	.	-	.	ID=gene-AC56_RS04105;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=AC56_RS04105;old_locus_tag=AC56_4018
NZ_JJLS01000275.1	Protein Homology	CDS	10210	11031	.	-	0	ID=cds-WP_001277561.1;Parent=gene-AC56_RS04105;Dbxref=GenBank:WP_001277561.1;Name=WP_001277561.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112113.1;locus_tag=AC56_RS04105;product=serine O-acetyltransferase;protein_id=WP_001277561.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	11111	12130	.	-	.	ID=gene-AC56_RS04100;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=AC56_RS04100;old_locus_tag=AC56_4019
NZ_JJLS01000275.1	Protein Homology	CDS	11111	12130	.	-	0	ID=cds-WP_001076194.1;Parent=gene-AC56_RS04100;Dbxref=GenBank:WP_001076194.1;Name=WP_001076194.1;Ontology_term=GO:0006072,GO:0047952;gbkey=CDS;gene=gpsA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312513.1;locus_tag=AC56_RS04100;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_001076194.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	12130	12597	.	-	.	ID=gene-AC56_RS04095;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=AC56_RS04095;old_locus_tag=AC56_4020
NZ_JJLS01000275.1	Protein Homology	CDS	12130	12597	.	-	0	ID=cds-WP_000003382.1;Parent=gene-AC56_RS04095;Dbxref=GenBank:WP_000003382.1;Name=WP_000003382.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015369180.1;locus_tag=AC56_RS04095;product=protein-export chaperone SecB;protein_id=WP_000003382.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	12660	12911	.	-	.	ID=gene-AC56_RS04090;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=AC56_RS04090;old_locus_tag=AC56_4021
NZ_JJLS01000275.1	Protein Homology	CDS	12660	12911	.	-	0	ID=cds-WP_000024392.1;Parent=gene-AC56_RS04090;Dbxref=GenBank:WP_000024392.1;Name=WP_000024392.1;gbkey=CDS;gene=grxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312515.1;locus_tag=AC56_RS04090;product=glutaredoxin 3;protein_id=WP_000024392.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	13053	13484	.	-	.	ID=gene-AC56_RS04085;Name=yibN;gbkey=Gene;gene=yibN;gene_biotype=protein_coding;locus_tag=AC56_RS04085;old_locus_tag=AC56_4022
NZ_JJLS01000275.1	Protein Homology	CDS	13053	13484	.	-	0	ID=cds-WP_001156181.1;Parent=gene-AC56_RS04085;Dbxref=GenBank:WP_001156181.1;Name=WP_001156181.1;gbkey=CDS;gene=yibN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312516.1;locus_tag=AC56_RS04085;product=rhodanese-like domain-containing protein;protein_id=WP_001156181.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	13729	15273	.	+	.	ID=gene-AC56_RS04080;Name=gpmM;gbkey=Gene;gene=gpmM;gene_biotype=protein_coding;gene_synonym=pgmI;locus_tag=AC56_RS04080;old_locus_tag=AC56_4023
NZ_JJLS01000275.1	Protein Homology	CDS	13729	15273	.	+	0	ID=cds-WP_000116566.1;Parent=gene-AC56_RS04080;Dbxref=GenBank:WP_000116566.1;Name=WP_000116566.1;Ontology_term=GO:0006007,GO:0004619;gbkey=CDS;gene=gpmM;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glucose catabolic process|0006007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312517.1;locus_tag=AC56_RS04080;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_000116566.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	15307	16566	.	+	.	ID=gene-AC56_RS04075;Name=envC;gbkey=Gene;gene=envC;gene_biotype=protein_coding;locus_tag=AC56_RS04075;old_locus_tag=AC56_4024
NZ_JJLS01000275.1	Protein Homology	CDS	15307	16566	.	+	0	ID=cds-WP_001713670.1;Parent=gene-AC56_RS04075;Dbxref=GenBank:WP_001713670.1;Name=WP_001713670.1;gbkey=CDS;gene=envC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418070.6;locus_tag=AC56_RS04075;product=murein hydrolase activator EnvC;protein_id=WP_001713670.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	16570	17529	.	+	.	ID=gene-AC56_RS04070;Name=yibQ;gbkey=Gene;gene=yibQ;gene_biotype=protein_coding;locus_tag=AC56_RS04070;old_locus_tag=AC56_4025
NZ_JJLS01000275.1	Protein Homology	CDS	16570	17529	.	+	0	ID=cds-WP_032279140.1;Parent=gene-AC56_RS04070;Dbxref=GenBank:WP_032279140.1;Name=WP_032279140.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;gene=yibQ;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312519.2;locus_tag=AC56_RS04070;product=divergent polysaccharide deacetylase family protein;protein_id=WP_032279140.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	17516	18550	.	-	.	ID=gene-AC56_RS04065;Name=waaH;gbkey=Gene;gene=waaH;gene_biotype=protein_coding;locus_tag=AC56_RS04065;old_locus_tag=AC56_4026
NZ_JJLS01000275.1	Protein Homology	CDS	17516	18550	.	-	0	ID=cds-WP_000982090.1;Parent=gene-AC56_RS04065;Dbxref=GenBank:WP_000982090.1;Name=WP_000982090.1;gbkey=CDS;gene=waaH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000982090.1;locus_tag=AC56_RS04065;product=UDP-glucuronate:LPS(HepIII) glycosyltransferase;protein_id=WP_000982090.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	18789	19814	.	-	.	ID=gene-AC56_RS04060;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=AC56_RS04060;old_locus_tag=AC56_4027
NZ_JJLS01000275.1	Protein Homology	CDS	18789	19814	.	-	0	ID=cds-WP_032279141.1;Parent=gene-AC56_RS04060;Dbxref=GenBank:WP_032279141.1;Name=WP_032279141.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120462.1;locus_tag=AC56_RS04060;product=L-threonine 3-dehydrogenase;protein_id=WP_032279141.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	19824	21020	.	-	.	ID=gene-AC56_RS04055;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=AC56_RS04055;old_locus_tag=AC56_4028
NZ_JJLS01000275.1	Protein Homology	CDS	19824	21020	.	-	0	ID=cds-WP_001213834.1;Parent=gene-AC56_RS04055;Dbxref=GenBank:WP_001213834.1;Name=WP_001213834.1;Ontology_term=GO:0006567,GO:0008890;gbkey=CDS;gene=kbl;go_function=glycine C-acetyltransferase activity|0008890||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239151.1;locus_tag=AC56_RS04055;product=glycine C-acetyltransferase;protein_id=WP_001213834.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	21234	22166	.	+	.	ID=gene-AC56_RS04050;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=AC56_RS04050;old_locus_tag=AC56_4029
NZ_JJLS01000275.1	Protein Homology	CDS	21234	22166	.	+	0	ID=cds-WP_032279142.1;Parent=gene-AC56_RS04050;Dbxref=GenBank:WP_032279142.1;Name=WP_032279142.1;Ontology_term=GO:0005975,GO:0008712;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233050.1;locus_tag=AC56_RS04050;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_032279142.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	22176	23222	.	+	.	ID=gene-AC56_RS04045;Name=rfaF;gbkey=Gene;gene=rfaF;gene_biotype=protein_coding;locus_tag=AC56_RS04045;old_locus_tag=AC56_4030
NZ_JJLS01000275.1	Protein Homology	CDS	22176	23222	.	+	0	ID=cds-WP_001469520.1;Parent=gene-AC56_RS04045;Dbxref=GenBank:WP_001469520.1;Name=WP_001469520.1;Ontology_term=GO:0009103,GO:0016757;gbkey=CDS;gene=rfaF;go_function=glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709400.1;locus_tag=AC56_RS04045;product=ADP-heptose--LPS heptosyltransferase RfaF;protein_id=WP_001469520.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	23226	24185	.	+	.	ID=gene-AC56_RS04040;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=AC56_RS04040;old_locus_tag=AC56_4031
NZ_JJLS01000275.1	Protein Homology	CDS	23226	24185	.	+	0	ID=cds-WP_021553964.1;Parent=gene-AC56_RS04040;Dbxref=GenBank:WP_021553964.1;Name=WP_021553964.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=rfaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016241715.1;locus_tag=AC56_RS04040;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=WP_021553964.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	24233	25486	.	-	.	ID=gene-AC56_RS04035;Name=AC56_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS04035;old_locus_tag=AC56_4032
NZ_JJLS01000275.1	Protein Homology	CDS	24233	25486	.	-	0	ID=cds-WP_000453195.1;Parent=gene-AC56_RS04035;Dbxref=GenBank:WP_000453195.1;Name=WP_000453195.1;Ontology_term=GO:0009103,GO:0008754,GO:0008755,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=O-antigen ligase activity|0008754||IEA,O antigen polymerase activity|0008755||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000453195.1;locus_tag=AC56_RS04035;product=O-antigen ligase family protein;protein_id=WP_000453195.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	25521	26294	.	-	.	ID=gene-AC56_RS04030;Name=AC56_RS04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS04030;old_locus_tag=AC56_4033
NZ_JJLS01000275.1	Protein Homology	CDS	25521	26294	.	-	0	ID=cds-WP_001052918.1;Parent=gene-AC56_RS04030;Dbxref=GenBank:WP_001052918.1;Name=WP_001052918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052917.1;locus_tag=AC56_RS04030;product=glycosyltransferase family 25 protein;protein_id=WP_001052918.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	26326	27354	.	-	.	ID=gene-AC56_RS04025;Name=AC56_RS04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS04025;old_locus_tag=AC56_4034
NZ_JJLS01000275.1	Protein Homology	CDS	26326	27354	.	-	0	ID=cds-WP_001469522.1;Parent=gene-AC56_RS04025;Dbxref=GenBank:WP_001469522.1;Name=WP_001469522.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001626264.1;locus_tag=AC56_RS04025;product=glycosyltransferase family 8 protein;protein_id=WP_001469522.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	27380	28072	.	-	.	ID=gene-AC56_RS04020;Name=rfaY;gbkey=Gene;gene=rfaY;gene_biotype=protein_coding;locus_tag=AC56_RS04020;old_locus_tag=AC56_4035
NZ_JJLS01000275.1	Protein Homology	CDS	27380	28072	.	-	0	ID=cds-WP_001469523.1;Parent=gene-AC56_RS04020;Dbxref=GenBank:WP_001469523.1;Name=WP_001469523.1;gbkey=CDS;gene=rfaY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000633080.1;locus_tag=AC56_RS04020;product=lipopolysaccharide core heptose(II) kinase RfaY;protein_id=WP_001469523.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	28082	29077	.	-	.	ID=gene-AC56_RS04015;Name=AC56_RS04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS04015;old_locus_tag=AC56_4036
NZ_JJLS01000275.1	Protein Homology	CDS	28082	29077	.	-	0	ID=cds-WP_001469524.1;Parent=gene-AC56_RS04015;Dbxref=GenBank:WP_001469524.1;Name=WP_001469524.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001001722.1;locus_tag=AC56_RS04015;product=glycosyltransferase family 8 protein;protein_id=WP_001469524.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	29094	30110	.	-	.	ID=gene-AC56_RS04010;Name=waaO;gbkey=Gene;gene=waaO;gene_biotype=protein_coding;gene_synonym=rfaI;locus_tag=AC56_RS04010;old_locus_tag=AC56_4037
NZ_JJLS01000275.1	Protein Homology	CDS	29094	30110	.	-	0	ID=cds-WP_001272734.1;Parent=gene-AC56_RS04010;Dbxref=GenBank:WP_001272734.1;Name=WP_001272734.1;Ontology_term=GO:0009103,GO:0008918;gbkey=CDS;gene=waaO;go_function=lipopolysaccharide 3-alpha-galactosyltransferase activity|0008918||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540083.1;locus_tag=AC56_RS04010;product=lipopolysaccharide 3-alpha-galactosyltransferase;protein_id=WP_001272734.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	30126	30923	.	-	.	ID=gene-AC56_RS04005;Name=rfaP;gbkey=Gene;gene=rfaP;gene_biotype=protein_coding;locus_tag=AC56_RS04005;old_locus_tag=AC56_4038
NZ_JJLS01000275.1	Protein Homology	CDS	30126	30923	.	-	0	ID=cds-WP_032279143.1;Parent=gene-AC56_RS04005;Dbxref=GenBank:WP_032279143.1;Name=WP_032279143.1;Ontology_term=GO:0009103,GO:0016301;gbkey=CDS;gene=rfaP;go_function=kinase activity|0016301||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312532.2;locus_tag=AC56_RS04005;product=lipopolysaccharide core heptose(I) kinase RfaP;protein_id=WP_032279143.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	30916	32040	.	-	.	ID=gene-AC56_RS04000;Name=waaG;gbkey=Gene;gene=waaG;gene_biotype=protein_coding;locus_tag=AC56_RS04000;old_locus_tag=AC56_4039
NZ_JJLS01000275.1	Protein Homology	CDS	30916	32040	.	-	0	ID=cds-WP_000634246.1;Parent=gene-AC56_RS04000;Dbxref=GenBank:WP_000634246.1;Name=WP_000634246.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;gene=waaG;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312533.1;locus_tag=AC56_RS04000;product=glycosyltransferase family 4 protein;protein_id=WP_000634246.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	32037	33095	.	-	.	ID=gene-AC56_RS03995;Name=rfaQ;gbkey=Gene;gene=rfaQ;gene_biotype=protein_coding;locus_tag=AC56_RS03995;old_locus_tag=AC56_4040
NZ_JJLS01000275.1	Protein Homology	CDS	32037	33095	.	-	0	ID=cds-WP_000360402.1;Parent=gene-AC56_RS03995;Dbxref=GenBank:WP_000360402.1;Name=WP_000360402.1;Ontology_term=GO:0016757;gbkey=CDS;gene=rfaQ;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709409.1;locus_tag=AC56_RS03995;product=lipopolysaccharide core heptosyltransferase RfaQ;protein_id=WP_000360402.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	33508	34785	.	+	.	ID=gene-AC56_RS03990;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=AC56_RS03990;old_locus_tag=AC56_4041
NZ_JJLS01000275.1	Protein Homology	CDS	33508	34785	.	+	0	ID=cds-WP_032279144.1;Parent=gene-AC56_RS03990;Dbxref=GenBank:WP_032279144.1;Name=WP_032279144.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312535.1;locus_tag=AC56_RS03990;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_032279144.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	34793	35272	.	+	.	ID=gene-AC56_RS03985;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=AC56_RS03985;old_locus_tag=AC56_4042
NZ_JJLS01000275.1	Protein Homology	CDS	34793	35272	.	+	0	ID=cds-WP_001171873.1;Parent=gene-AC56_RS03985;Dbxref=GenBank:WP_001171873.1;Name=WP_001171873.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312536.1;locus_tag=AC56_RS03985;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_001171873.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	35311	36120	.	-	.	ID=gene-AC56_RS03980;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=AC56_RS03980;old_locus_tag=AC56_4043
NZ_JJLS01000275.1	Protein Homology	CDS	35311	36120	.	-	0	ID=cds-WP_001114529.1;Parent=gene-AC56_RS03980;Dbxref=GenBank:WP_001114529.1;Name=WP_001114529.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312537.1;locus_tag=AC56_RS03980;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_001114529.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	36218	36385	.	-	.	ID=gene-AC56_RS03975;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=AC56_RS03975;old_locus_tag=AC56_4044
NZ_JJLS01000275.1	Protein Homology	CDS	36218	36385	.	-	0	ID=cds-WP_001051798.1;Parent=gene-AC56_RS03975;Dbxref=GenBank:WP_001051798.1;Name=WP_001051798.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=AC56_RS03975;product=50S ribosomal protein L33;protein_id=WP_001051798.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	36406	36642	.	-	.	ID=gene-AC56_RS03970;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=AC56_RS03970;old_locus_tag=AC56_4045
NZ_JJLS01000275.1	Protein Homology	CDS	36406	36642	.	-	0	ID=cds-WP_000091955.1;Parent=gene-AC56_RS03970;Dbxref=GenBank:WP_000091955.1;Name=WP_000091955.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=AC56_RS03970;product=50S ribosomal protein L28;protein_id=WP_000091955.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	36859	37527	.	-	.	ID=gene-AC56_RS03965;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=AC56_RS03965;old_locus_tag=AC56_4046
NZ_JJLS01000275.1	Protein Homology	CDS	36859	37527	.	-	0	ID=cds-WP_001297375.1;Parent=gene-AC56_RS03965;Dbxref=GenBank:WP_001297375.1;Name=WP_001297375.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709417.4;locus_tag=AC56_RS03965;product=RadC family protein;protein_id=WP_001297375.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	37699	38919	.	+	.	ID=gene-AC56_RS03960;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=AC56_RS03960;old_locus_tag=AC56_4047
NZ_JJLS01000275.1	Protein Homology	CDS	37699	38919	.	+	0	ID=cds-WP_000050139.1;Parent=gene-AC56_RS03960;Dbxref=GenBank:WP_000050139.1;Name=WP_000050139.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418096.4;locus_tag=AC56_RS03960;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_000050139.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	38897	39355	.	+	.	ID=gene-AC56_RS03955;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=AC56_RS03955;old_locus_tag=AC56_4048
NZ_JJLS01000275.1	Protein Homology	CDS	38897	39355	.	+	0	ID=cds-WP_000976070.1;Parent=gene-AC56_RS03955;Dbxref=GenBank:WP_000976070.1;Name=WP_000976070.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1;locus_tag=AC56_RS03955;product=dUTP diphosphatase;protein_id=WP_000976070.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	39462	40058	.	+	.	ID=gene-AC56_RS03950;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=AC56_RS03950;old_locus_tag=AC56_4049
NZ_JJLS01000275.1	Protein Homology	CDS	39462	40058	.	+	0	ID=cds-WP_000818601.1;Parent=gene-AC56_RS03950;Dbxref=GenBank:WP_000818601.1;Name=WP_000818601.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818604.1;locus_tag=AC56_RS03950;product=nucleoid occlusion factor SlmA;protein_id=WP_000818601.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	40095	40736	.	-	.	ID=gene-AC56_RS03945;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=AC56_RS03945;old_locus_tag=AC56_4050
NZ_JJLS01000275.1	Protein Homology	CDS	40095	40736	.	-	0	ID=cds-WP_000806177.1;Parent=gene-AC56_RS03945;Dbxref=GenBank:WP_000806177.1;Name=WP_000806177.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418099.1;locus_tag=AC56_RS03945;product=orotate phosphoribosyltransferase;protein_id=WP_000806177.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	40802	41518	.	-	.	ID=gene-AC56_RS03940;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=AC56_RS03940;old_locus_tag=AC56_4051
NZ_JJLS01000275.1	Protein Homology	CDS	40802	41518	.	-	0	ID=cds-WP_032279149.1;Parent=gene-AC56_RS03940;Dbxref=GenBank:WP_032279149.1;Name=WP_032279149.1;Ontology_term=GO:0008033,GO:0000049,GO:0009022;gbkey=CDS;gene=rph;go_function=tRNA binding|0000049||IEA,tRNA nucleotidyltransferase activity|0009022||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006803115.1;locus_tag=AC56_RS03940;product=ribonuclease PH;protein_id=WP_032279149.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	41645	42508	.	+	.	ID=gene-AC56_RS03935;Name=yicC;gbkey=Gene;gene=yicC;gene_biotype=protein_coding;locus_tag=AC56_RS03935;old_locus_tag=AC56_4052
NZ_JJLS01000275.1	Protein Homology	CDS	41645	42508	.	+	0	ID=cds-WP_000621336.1;Parent=gene-AC56_RS03935;Dbxref=GenBank:WP_000621336.1;Name=WP_000621336.1;Ontology_term=GO:0016788;gbkey=CDS;gene=yicC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=AC56_RS03935;product=YicC/YloC family endoribonuclease;protein_id=WP_000621336.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	pseudogene	42729	43553	.	+	.	ID=gene-AC56_RS33005;Name=dinD;gbkey=Gene;gene=dinD;gene_biotype=pseudogene;locus_tag=AC56_RS33005;pseudo=true
NZ_JJLS01000275.1	Protein Homology	CDS	42729	43553	.	+	0	ID=cds-AC56_RS33005;Parent=gene-AC56_RS33005;Note=internal stop;gbkey=CDS;gene=dinD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312547.2;locus_tag=AC56_RS33005;product=DNA damage-inducible protein D;pseudo=true;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	43844	44461	.	+	.	ID=gene-AC56_RS03930;Name=yicG;gbkey=Gene;gene=yicG;gene_biotype=protein_coding;locus_tag=AC56_RS03930;old_locus_tag=AC56_4056
NZ_JJLS01000275.1	Protein Homology	CDS	43844	44461	.	+	0	ID=cds-WP_000924289.1;Parent=gene-AC56_RS03930;Dbxref=GenBank:WP_000924289.1;Name=WP_000924289.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yicG;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312548.2;locus_tag=AC56_RS03930;product=trimeric intracellular cation channel family protein;protein_id=WP_000924289.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	44458	46140	.	-	.	ID=gene-AC56_RS03925;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;locus_tag=AC56_RS03925;old_locus_tag=AC56_4057
NZ_JJLS01000275.1	Protein Homology	CDS	44458	46140	.	-	0	ID=cds-WP_032279151.1;Parent=gene-AC56_RS03925;Dbxref=GenBank:WP_032279151.1;Name=WP_032279151.1;Ontology_term=GO:0006260,GO:0006281,GO:0003911;gbkey=CDS;gene=ligB;go_function=DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418104.2;locus_tag=AC56_RS03925;product=NAD-dependent DNA ligase LigB;protein_id=WP_032279151.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	46398	47021	.	+	.	ID=gene-AC56_RS03920;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=AC56_RS03920;old_locus_tag=AC56_4058
NZ_JJLS01000275.1	Protein Homology	CDS	46398	47021	.	+	0	ID=cds-WP_001295237.1;Parent=gene-AC56_RS03920;Dbxref=GenBank:WP_001295237.1;Name=WP_001295237.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=AC56_RS03920;product=guanylate kinase;protein_id=WP_001295237.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	47076	47351	.	+	.	ID=gene-AC56_RS03915;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=AC56_RS03915;old_locus_tag=AC56_4059
NZ_JJLS01000275.1	Protein Homology	CDS	47076	47351	.	+	0	ID=cds-WP_000135058.1;Parent=gene-AC56_RS03915;Dbxref=GenBank:WP_000135058.1;Name=WP_000135058.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=AC56_RS03915;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_000135058.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	47370	49478	.	+	.	ID=gene-AC56_RS03910;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=AC56_RS03910;old_locus_tag=AC56_4060
NZ_JJLS01000275.1	Protein Homology	CDS	47370	49478	.	+	0	ID=cds-WP_000280488.1;Parent=gene-AC56_RS03910;Dbxref=GenBank:WP_000280488.1;Name=WP_000280488.1;Ontology_term=GO:0015969,GO:0008728,GO:0008893;gbkey=CDS;gene=spoT;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312552.1;locus_tag=AC56_RS03910;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_000280488.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	49485	50174	.	+	.	ID=gene-AC56_RS03905;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=AC56_RS03905;old_locus_tag=AC56_4061
NZ_JJLS01000275.1	Protein Homology	CDS	49485	50174	.	+	0	ID=cds-WP_001070177.1;Parent=gene-AC56_RS03905;Dbxref=GenBank:WP_001070177.1;Name=WP_001070177.1;Ontology_term=GO:0030488,GO:0141100;gbkey=CDS;gene=trmH;go_function=tRNA (guanine(18)-2'-O)-methyltransferase activity|0141100||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418108.1;locus_tag=AC56_RS03905;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=WP_001070177.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	50180	52261	.	+	.	ID=gene-AC56_RS03900;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=AC56_RS03900;old_locus_tag=AC56_4062
NZ_JJLS01000275.1	Protein Homology	CDS	50180	52261	.	+	0	ID=cds-WP_000678417.1;Parent=gene-AC56_RS03900;Dbxref=GenBank:WP_000678417.1;Name=WP_000678417.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418109.1;locus_tag=AC56_RS03900;product=ATP-dependent DNA helicase RecG;protein_id=WP_000678417.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	52430	53635	.	-	.	ID=gene-AC56_RS03895;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=AC56_RS03895;old_locus_tag=AC56_4063
NZ_JJLS01000275.1	Protein Homology	CDS	52430	53635	.	-	0	ID=cds-WP_000468836.1;Parent=gene-AC56_RS03895;Dbxref=GenBank:WP_000468836.1;Name=WP_000468836.1;Ontology_term=GO:0015813,GO:0015501,GO:0016020;gbkey=CDS;gene=gltS;go_component=membrane|0016020||IEA;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312556.1;locus_tag=AC56_RS03895;product=sodium/glutamate symporter;protein_id=WP_000468836.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	53915	55306	.	+	.	ID=gene-AC56_RS03890;Name=xanP;gbkey=Gene;gene=xanP;gene_biotype=protein_coding;locus_tag=AC56_RS03890;old_locus_tag=AC56_4064
NZ_JJLS01000275.1	Protein Homology	CDS	53915	55306	.	+	0	ID=cds-WP_001295238.1;Parent=gene-AC56_RS03890;Dbxref=GenBank:WP_001295238.1;Name=WP_001295238.1;gbkey=CDS;gene=xanP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312557.1;locus_tag=AC56_RS03890;product=xanthine/proton symporter XanP;protein_id=WP_001295238.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	55427	57136	.	+	.	ID=gene-AC56_RS03885;Name=yicH;gbkey=Gene;gene=yicH;gene_biotype=protein_coding;locus_tag=AC56_RS03885;old_locus_tag=AC56_4065
NZ_JJLS01000275.1	Protein Homology	CDS	55427	57136	.	+	0	ID=cds-WP_001295239.1;Parent=gene-AC56_RS03885;Dbxref=GenBank:WP_001295239.1;Name=WP_001295239.1;gbkey=CDS;gene=yicH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418112.1;locus_tag=AC56_RS03885;product=AsmA family protein;protein_id=WP_001295239.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	57189	59507	.	-	.	ID=gene-AC56_RS03880;Name=yicI;gbkey=Gene;gene=yicI;gene_biotype=protein_coding;locus_tag=AC56_RS03880;old_locus_tag=AC56_4066
NZ_JJLS01000275.1	Protein Homology	CDS	57189	59507	.	-	0	ID=cds-WP_032279153.1;Parent=gene-AC56_RS03880;Dbxref=GenBank:WP_032279153.1;Name=WP_032279153.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=yicI;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418113.1;locus_tag=AC56_RS03880;product=alpha-xylosidase;protein_id=WP_032279153.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	59517	60899	.	-	.	ID=gene-AC56_RS03875;Name=yicJ;gbkey=Gene;gene=yicJ;gene_biotype=protein_coding;locus_tag=AC56_RS03875;old_locus_tag=AC56_4067
NZ_JJLS01000275.1	Protein Homology	CDS	59517	60899	.	-	0	ID=cds-WP_000834439.1;Parent=gene-AC56_RS03875;Dbxref=GenBank:WP_000834439.1;Name=WP_000834439.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0016020;gbkey=CDS;gene=yicJ;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418114.4;locus_tag=AC56_RS03875;product=glycoside-pentoside-hexuronide family transporter;protein_id=WP_000834439.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	61192	61286	.	+	.	ID=gene-AC56_RS03870;Name=AC56_RS03870;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS03870;old_locus_tag=AC56_4068
NZ_JJLS01000275.1	tRNAscan-SE	tRNA	61192	61286	.	+	.	ID=rna-AC56_RS03870;Parent=gene-AC56_RS03870;anticodon=(pos:61226..61228);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS03870;product=tRNA-Sec
NZ_JJLS01000275.1	tRNAscan-SE	exon	61192	61286	.	+	.	ID=exon-AC56_RS03870-1;Parent=rna-AC56_RS03870;anticodon=(pos:61226..61228);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS03870;product=tRNA-Sec
NZ_JJLS01000275.1	RefSeq	gene	61449	62612	.	+	.	ID=gene-AC56_RS03865;Name=AC56_RS03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS03865;old_locus_tag=AC56_4069
NZ_JJLS01000275.1	Protein Homology	CDS	61449	62612	.	+	0	ID=cds-WP_001218976.1;Parent=gene-AC56_RS03865;Dbxref=GenBank:WP_001218976.1;Name=WP_001218976.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001218976.1;locus_tag=AC56_RS03865;product=tyrosine-type recombinase/integrase;protein_id=WP_001218976.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	62625	64157	.	+	.	ID=gene-AC56_RS33420;Name=AC56_RS33420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33420;old_locus_tag=AC56_4070
NZ_JJLS01000275.1	Protein Homology	CDS	62625	64157	.	+	0	ID=cds-WP_023146727.1;Parent=gene-AC56_RS33420;Dbxref=GenBank:WP_023146727.1;Name=WP_023146727.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024685.6;locus_tag=AC56_RS33420;product=SIR2 family protein;protein_id=WP_023146727.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	gene	64364	65344	.	+	.	ID=gene-AC56_RS33425;Name=AC56_RS33425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33425;old_locus_tag=AC56_4071
NZ_JJLS01000275.1	GeneMarkS-2+	CDS	64364	65344	.	+	0	ID=cds-WP_248784854.1;Parent=gene-AC56_RS33425;Dbxref=GenBank:WP_248784854.1;Name=WP_248784854.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS33425;product=hypothetical protein;protein_id=WP_248784854.1;transl_table=11
NZ_JJLS01000275.1	RefSeq	pseudogene	65552	65957	.	-	.	ID=gene-AC56_RS03860;Name=AC56_RS03860;end_range=65957,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS03860;old_locus_tag=AC56_4072;partial=true;pseudo=true
NZ_JJLS01000275.1	Protein Homology	CDS	65552	65957	.	-	1	ID=cds-AC56_RS03860;Parent=gene-AC56_RS03860;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=65957,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS03860;partial=true;product=IS5-like element IS903B family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000276.1 1 14814
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000276.1	RefSeq	region	1	14814	.	+	.	ID=NZ_JJLS01000276.1:1..14814;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000276.1	RefSeq	gene	1	440	.	-	.	ID=gene-AC56_RS03855;Name=AC56_RS03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS03855;old_locus_tag=AC56_4073;partial=true;start_range=.,1
NZ_JJLS01000276.1	Protein Homology	CDS	1	440	.	-	0	ID=cds-WP_032278941.1-3;Parent=gene-AC56_RS03855;Dbxref=GenBank:WP_032278941.1;Name=WP_032278941.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS03855;partial=true;product=IS5 family transposase;protein_id=WP_032278941.1;start_range=.,1;transl_table=11
NZ_JJLS01000276.1	RefSeq	gene	532	1104	.	-	.	ID=gene-AC56_RS03850;Name=AC56_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS03850;old_locus_tag=AC56_4074
NZ_JJLS01000276.1	Protein Homology	CDS	532	1104	.	-	0	ID=cds-WP_000446128.1;Parent=gene-AC56_RS03850;Dbxref=GenBank:WP_000446128.1;Name=WP_000446128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774583.1;locus_tag=AC56_RS03850;product=phage polarity suppression protein;protein_id=WP_000446128.1;transl_table=11
NZ_JJLS01000276.1	RefSeq	gene	1178	1678	.	-	.	ID=gene-AC56_RS0127210;Name=AC56_RS0127210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0127210;old_locus_tag=AC56_4075
NZ_JJLS01000276.1	Protein Homology	CDS	1178	1678	.	-	0	ID=cds-WP_032176525.1;Parent=gene-AC56_RS0127210;Dbxref=GenBank:WP_032176525.1;Name=WP_032176525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001405508.1;locus_tag=AC56_RS0127210;product=ogr/Delta-like zinc finger family protein;protein_id=WP_032176525.1;transl_table=11
NZ_JJLS01000276.1	RefSeq	gene	1675	2409	.	-	.	ID=gene-AC56_RS03845;Name=AC56_RS03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS03845;old_locus_tag=AC56_4077
NZ_JJLS01000276.1	Protein Homology	CDS	1675	2409	.	-	0	ID=cds-WP_001283015.1;Parent=gene-AC56_RS03845;Dbxref=GenBank:WP_001283015.1;Name=WP_001283015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001600374.1;locus_tag=AC56_RS03845;product=hypothetical protein;protein_id=WP_001283015.1;transl_table=11
NZ_JJLS01000276.1	RefSeq	gene	2961	3227	.	+	.	ID=gene-AC56_RS03840;Name=AC56_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS03840;old_locus_tag=AC56_4079
NZ_JJLS01000276.1	Protein Homology	CDS	2961	3227	.	+	0	ID=cds-WP_001613634.1;Parent=gene-AC56_RS03840;Dbxref=GenBank:WP_001613634.1;Name=WP_001613634.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015979398.1;locus_tag=AC56_RS03840;product=helix-turn-helix transcriptional regulator;protein_id=WP_001613634.1;transl_table=11
NZ_JJLS01000276.1	RefSeq	gene	3224	3814	.	+	.	ID=gene-AC56_RS03835;Name=AC56_RS03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS03835;old_locus_tag=AC56_4080
NZ_JJLS01000276.1	Protein Homology	CDS	3224	3814	.	+	0	ID=cds-WP_032279155.1;Parent=gene-AC56_RS03835;Dbxref=GenBank:WP_032279155.1;Name=WP_032279155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000980235.1;locus_tag=AC56_RS03835;product=host cell division inhibitor Icd-like protein;protein_id=WP_032279155.1;transl_table=11
NZ_JJLS01000276.1	RefSeq	gene	3807	4094	.	+	.	ID=gene-AC56_RS03830;Name=AC56_RS03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS03830;old_locus_tag=AC56_4081
NZ_JJLS01000276.1	Protein Homology	CDS	3807	4094	.	+	0	ID=cds-WP_001244664.1;Parent=gene-AC56_RS03830;Dbxref=GenBank:WP_001244664.1;Name=WP_001244664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001244665.1;locus_tag=AC56_RS03830;product=hypothetical protein;protein_id=WP_001244664.1;transl_table=11
NZ_JJLS01000276.1	RefSeq	gene	4087	4542	.	+	.	ID=gene-AC56_RS03825;Name=AC56_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS03825;old_locus_tag=AC56_4082
NZ_JJLS01000276.1	Protein Homology	CDS	4087	4542	.	+	0	ID=cds-WP_032279157.1;Parent=gene-AC56_RS03825;Dbxref=GenBank:WP_032279157.1;Name=WP_032279157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016569899.1;locus_tag=AC56_RS03825;product=hypothetical protein;protein_id=WP_032279157.1;transl_table=11
NZ_JJLS01000276.1	RefSeq	gene	4678	4998	.	+	.	ID=gene-AC56_RS03820;Name=AC56_RS03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS03820;old_locus_tag=AC56_4083
NZ_JJLS01000276.1	Protein Homology	CDS	4678	4998	.	+	0	ID=cds-WP_000856729.1;Parent=gene-AC56_RS03820;Dbxref=GenBank:WP_000856729.1;Name=WP_000856729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224852.1;locus_tag=AC56_RS03820;product=DUF5375 domain-containing protein;protein_id=WP_000856729.1;transl_table=11
NZ_JJLS01000276.1	RefSeq	gene	5013	7346	.	+	.	ID=gene-AC56_RS03815;Name=AC56_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS03815;old_locus_tag=AC56_4084
NZ_JJLS01000276.1	Protein Homology	CDS	5013	7346	.	+	0	ID=cds-WP_032279159.1;Parent=gene-AC56_RS03815;Dbxref=GenBank:WP_032279159.1;Name=WP_032279159.1;Ontology_term=GO:0003899,GO:0004386,GO:0008270;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA,helicase activity|0004386||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000783677.1;locus_tag=AC56_RS03815;product=primase-helicase zinc-binding domain-containing protein;protein_id=WP_032279159.1;transl_table=11
NZ_JJLS01000276.1	RefSeq	pseudogene	7922	8083	.	+	.	ID=gene-AC56_RS33430;Name=rhuM;end_range=8083,.;gbkey=Gene;gene=rhuM;gene_biotype=pseudogene;locus_tag=AC56_RS33430;old_locus_tag=AC56_4085;partial=true;pseudo=true;start_range=.,7922
NZ_JJLS01000276.1	Protein Homology	CDS	7922	8083	.	+	0	ID=cds-AC56_RS33430;Parent=gene-AC56_RS33430;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=8083,.;gbkey=CDS;gene=rhuM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000774140.1;locus_tag=AC56_RS33430;partial=true;product=RhuM family protein;pseudo=true;start_range=.,7922;transl_table=11
NZ_JJLS01000276.1	RefSeq	gene	8480	9664	.	+	.	ID=gene-AC56_RS03805;Name=setC;gbkey=Gene;gene=setC;gene_biotype=protein_coding;locus_tag=AC56_RS03805;old_locus_tag=AC56_4086
NZ_JJLS01000276.1	Protein Homology	CDS	8480	9664	.	+	0	ID=cds-WP_001172876.1;Parent=gene-AC56_RS03805;Dbxref=GenBank:WP_001172876.1;Name=WP_001172876.1;Ontology_term=GO:0008643,GO:0005351,GO:0016020;gbkey=CDS;gene=setC;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418115.1;locus_tag=AC56_RS03805;product=sugar efflux transporter;protein_id=WP_001172876.1;transl_table=11
NZ_JJLS01000276.1	RefSeq	gene	9775	10698	.	+	.	ID=gene-AC56_RS03800;Name=yicL;gbkey=Gene;gene=yicL;gene_biotype=protein_coding;locus_tag=AC56_RS03800;old_locus_tag=AC56_4087
NZ_JJLS01000276.1	Protein Homology	CDS	9775	10698	.	+	0	ID=cds-WP_000535963.1;Parent=gene-AC56_RS03800;Dbxref=GenBank:WP_000535963.1;Name=WP_000535963.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yicL;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312621.1;locus_tag=AC56_RS03800;product=carboxylate/amino acid/amine transporter;protein_id=WP_000535963.1;transl_table=11
NZ_JJLS01000276.1	RefSeq	gene	10702	11520	.	-	.	ID=gene-AC56_RS03795;Name=nlpA;gbkey=Gene;gene=nlpA;gene_biotype=protein_coding;locus_tag=AC56_RS03795;old_locus_tag=AC56_4088
NZ_JJLS01000276.1	Protein Homology	CDS	10702	11520	.	-	0	ID=cds-WP_000779429.1;Parent=gene-AC56_RS03795;Dbxref=GenBank:WP_000779429.1;Name=WP_000779429.1;gbkey=CDS;gene=nlpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418117.1;locus_tag=AC56_RS03795;product=lipoprotein NlpA;protein_id=WP_000779429.1;transl_table=11
NZ_JJLS01000276.1	RefSeq	gene	11742	12035	.	+	.	ID=gene-AC56_RS03785;Name=yicS;gbkey=Gene;gene=yicS;gene_biotype=protein_coding;locus_tag=AC56_RS03785;old_locus_tag=AC56_4090
NZ_JJLS01000276.1	Protein Homology	CDS	11742	12035	.	+	0	ID=cds-WP_000805509.1;Parent=gene-AC56_RS03785;Dbxref=GenBank:WP_000805509.1;Name=WP_000805509.1;gbkey=CDS;gene=yicS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588471.1;locus_tag=AC56_RS03785;product=protein YicS;protein_id=WP_000805509.1;transl_table=11
NZ_JJLS01000276.1	RefSeq	gene	12076	13266	.	-	.	ID=gene-AC56_RS03780;Name=nepI;gbkey=Gene;gene=nepI;gene_biotype=protein_coding;locus_tag=AC56_RS03780;old_locus_tag=AC56_4091
NZ_JJLS01000276.1	Protein Homology	CDS	12076	13266	.	-	0	ID=cds-WP_001288549.1;Parent=gene-AC56_RS03780;Dbxref=GenBank:WP_001288549.1;Name=WP_001288549.1;Ontology_term=GO:0015860,GO:0015211,GO:0016020;gbkey=CDS;gene=nepI;go_component=membrane|0016020||IEA;go_function=purine nucleoside transmembrane transporter activity|0015211||IEA;go_process=purine nucleoside transmembrane transport|0015860||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418118.2;locus_tag=AC56_RS03780;product=purine ribonucleoside efflux pump NepI;protein_id=WP_001288549.1;transl_table=11
NZ_JJLS01000276.1	RefSeq	gene	13477	13929	.	-	.	ID=gene-AC56_RS03775;Name=yicN;gbkey=Gene;gene=yicN;gene_biotype=protein_coding;locus_tag=AC56_RS03775;old_locus_tag=AC56_4092
NZ_JJLS01000276.1	Protein Homology	CDS	13477	13929	.	-	0	ID=cds-WP_001295241.1;Parent=gene-AC56_RS03775;Dbxref=GenBank:WP_001295241.1;Name=WP_001295241.1;gbkey=CDS;gene=yicN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418119.2;locus_tag=AC56_RS03775;product=DUF1198 domain-containing protein;protein_id=WP_001295241.1;transl_table=11
NZ_JJLS01000276.1	RefSeq	pseudogene	13982	14383	.	-	.	ID=gene-AC56_RS03770;Name=adeQ;end_range=14383,.;gbkey=Gene;gene=adeQ;gene_biotype=pseudogene;gene_synonym=yicO;locus_tag=AC56_RS03770;old_locus_tag=AC56_4093;partial=true;pseudo=true
NZ_JJLS01000276.1	Protein Homology	CDS	13982	14383	.	-	0	ID=cds-AC56_RS03770;Parent=gene-AC56_RS03770;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=14383,.;gbkey=CDS;gene=adeQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418120.2;locus_tag=AC56_RS03770;partial=true;product=adenine permease AdeQ;pseudo=true;transl_table=11
NZ_JJLS01000276.1	RefSeq	pseudogene	14440	14814	.	+	.	ID=gene-AC56_RS0127215;Name=AC56_RS0127215;end_range=14814,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0127215;partial=true;pseudo=true
NZ_JJLS01000276.1	Protein Homology	CDS	14440	14814	.	+	0	ID=cds-AC56_RS0127215;Parent=gene-AC56_RS0127215;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=14814,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS0127215;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000277.1 1 14645
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000277.1	RefSeq	region	1	14645	.	+	.	ID=NZ_JJLS01000277.1:1..14645;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000277.1	RefSeq	gene	1	405	.	+	.	ID=gene-AC56_RS03765;Name=AC56_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS03765;old_locus_tag=AC56_4095;partial=true;start_range=.,1
NZ_JJLS01000277.1	Protein Homology	CDS	1	405	.	+	0	ID=cds-WP_032282906.1;Parent=gene-AC56_RS03765;Dbxref=GenBank:WP_032282906.1;Name=WP_032282906.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS03765;partial=true;product=IS1 family transposase;protein_id=WP_032282906.1;start_range=.,1;transl_table=11
NZ_JJLS01000277.1	RefSeq	pseudogene	420	1361	.	-	.	ID=gene-AC56_RS0127225;Name=adeQ;gbkey=Gene;gene=adeQ;gene_biotype=pseudogene;gene_synonym=yicO;locus_tag=AC56_RS0127225;old_locus_tag=AC56_4096;partial=true;pseudo=true;start_range=.,420
NZ_JJLS01000277.1	Protein Homology	CDS	420	1361	.	-	0	ID=cds-AC56_RS0127225;Parent=gene-AC56_RS0127225;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=adeQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418120.2;locus_tag=AC56_RS0127225;partial=true;product=adenine permease AdeQ;pseudo=true;start_range=.,420;transl_table=11
NZ_JJLS01000277.1	RefSeq	pseudogene	1536	3301	.	+	.	ID=gene-AC56_RS0127230;Name=adeD;gbkey=Gene;gene=adeD;gene_biotype=pseudogene;locus_tag=AC56_RS0127230;pseudo=true
NZ_JJLS01000277.1	Protein Homology	CDS	1536	3301	.	+	0	ID=cds-AC56_RS0127230;Parent=gene-AC56_RS0127230;Note=frameshifted;gbkey=CDS;gene=adeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418121.1;locus_tag=AC56_RS0127230;product=adenine deaminase;pseudo=true;transl_table=11
NZ_JJLS01000277.1	RefSeq	gene	3346	4737	.	-	.	ID=gene-AC56_RS03760;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=AC56_RS03760;old_locus_tag=AC56_4101
NZ_JJLS01000277.1	Protein Homology	CDS	3346	4737	.	-	0	ID=cds-WP_001665827.1;Parent=gene-AC56_RS03760;Dbxref=GenBank:WP_001665827.1;Name=WP_001665827.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312630.1;locus_tag=AC56_RS03760;product=hexose-6-phosphate:phosphate antiporter;protein_id=WP_001665827.1;transl_table=11
NZ_JJLS01000277.1	RefSeq	gene	4875	6194	.	-	.	ID=gene-AC56_RS03755;Name=uhpC;gbkey=Gene;gene=uhpC;gene_biotype=protein_coding;locus_tag=AC56_RS03755;old_locus_tag=AC56_4102
NZ_JJLS01000277.1	Protein Homology	CDS	4875	6194	.	-	0	ID=cds-WP_000936566.1;Parent=gene-AC56_RS03755;Dbxref=GenBank:WP_000936566.1;Name=WP_000936566.1;gbkey=CDS;gene=uhpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418123.2;locus_tag=AC56_RS03755;product=MFS transporter family glucose-6-phosphate receptor UhpC;protein_id=WP_000936566.1;transl_table=11
NZ_JJLS01000277.1	RefSeq	gene	6204	7706	.	-	.	ID=gene-AC56_RS03750;Name=uhpB;gbkey=Gene;gene=uhpB;gene_biotype=protein_coding;locus_tag=AC56_RS03750;old_locus_tag=AC56_4103
NZ_JJLS01000277.1	Protein Homology	CDS	6204	7706	.	-	0	ID=cds-WP_032279164.1;Parent=gene-AC56_RS03750;Dbxref=GenBank:WP_032279164.1;Name=WP_032279164.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=uhpB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418124.4;locus_tag=AC56_RS03750;product=signal transduction histidine-protein kinase/phosphatase UhpB;protein_id=WP_032279164.1;transl_table=11
NZ_JJLS01000277.1	RefSeq	gene	7706	8296	.	-	.	ID=gene-AC56_RS03745;Name=uhpA;gbkey=Gene;gene=uhpA;gene_biotype=protein_coding;locus_tag=AC56_RS03745;old_locus_tag=AC56_4104
NZ_JJLS01000277.1	Protein Homology	CDS	7706	8296	.	-	0	ID=cds-WP_032279166.1;Parent=gene-AC56_RS03745;Dbxref=GenBank:WP_032279166.1;Name=WP_032279166.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=uhpA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312633.1;locus_tag=AC56_RS03745;product=transcriptional regulator UhpA;protein_id=WP_032279166.1;transl_table=11
NZ_JJLS01000277.1	RefSeq	gene	8371	8661	.	-	.	ID=gene-AC56_RS03740;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=AC56_RS03740;old_locus_tag=AC56_4105
NZ_JJLS01000277.1	Protein Homology	CDS	8371	8661	.	-	0	ID=cds-WP_001181706.1;Parent=gene-AC56_RS03740;Dbxref=GenBank:WP_001181706.1;Name=WP_001181706.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312638.1;locus_tag=AC56_RS03740;product=acetolactate synthase small subunit;protein_id=WP_001181706.1;transl_table=11
NZ_JJLS01000277.1	RefSeq	gene	8665	10353	.	-	.	ID=gene-AC56_RS03735;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=AC56_RS03735;old_locus_tag=AC56_4106
NZ_JJLS01000277.1	Protein Homology	CDS	8665	10353	.	-	0	ID=cds-WP_032279167.1;Parent=gene-AC56_RS03735;Dbxref=GenBank:WP_032279167.1;Name=WP_032279167.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418127.1;locus_tag=AC56_RS03735;product=acetolactate synthase large subunit;protein_id=WP_032279167.1;transl_table=11
NZ_JJLS01000277.1	RefSeq	gene	10459	10557	.	-	.	ID=gene-AC56_RS0127235;Name=ivbL;gbkey=Gene;gene=ivbL;gene_biotype=protein_coding;locus_tag=AC56_RS0127235
NZ_JJLS01000277.1	Protein Homology	CDS	10459	10557	.	-	0	ID=cds-WP_001300753.1;Parent=gene-AC56_RS0127235;Dbxref=GenBank:WP_001300753.1;Name=WP_001300753.1;gbkey=CDS;gene=ivbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418128.1;locus_tag=AC56_RS0127235;product=ilvB operon leader peptide IvbL;protein_id=WP_001300753.1;transl_table=11
NZ_JJLS01000277.1	RefSeq	gene	11122	11211	.	+	.	ID=gene-AC56_RS0127250;Name=tisB;gbkey=Gene;gene=tisB;gene_biotype=protein_coding;locus_tag=AC56_RS0127250
NZ_JJLS01000277.1	Protein Homology	CDS	11122	11211	.	+	0	ID=cds-WP_000060506.1;Parent=gene-AC56_RS0127250;Dbxref=GenBank:WP_000060506.1;Name=WP_000060506.1;gbkey=CDS;gene=tisB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502662.1;locus_tag=AC56_RS0127250;product=type I toxin-antitoxin system toxin TisB;protein_id=WP_000060506.1;transl_table=11
NZ_JJLS01000277.1	RefSeq	gene	11335	11409	.	-	.	ID=gene-AC56_RS33435;Name=ysdE;gbkey=Gene;gene=ysdE;gene_biotype=protein_coding;locus_tag=AC56_RS33435
NZ_JJLS01000277.1	Protein Homology	CDS	11335	11409	.	-	0	ID=cds-WP_211180519.1;Parent=gene-AC56_RS33435;Dbxref=GenBank:WP_211180519.1;Name=WP_211180519.1;gbkey=CDS;gene=ysdE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051212.1;locus_tag=AC56_RS33435;product=protein YsdE;protein_id=WP_211180519.1;transl_table=11
NZ_JJLS01000277.1	RefSeq	gene	11491	12675	.	+	.	ID=gene-AC56_RS03730;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=AC56_RS03730;old_locus_tag=AC56_4108
NZ_JJLS01000277.1	Protein Homology	CDS	11491	12675	.	+	0	ID=cds-WP_000828746.1;Parent=gene-AC56_RS03730;Dbxref=GenBank:WP_000828746.1;Name=WP_000828746.1;gbkey=CDS;gene=emrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418129.2;locus_tag=AC56_RS03730;product=multidrug efflux MFS transporter EmrD;protein_id=WP_000828746.1;transl_table=11
NZ_JJLS01000277.1	RefSeq	gene	12683	13180	.	-	.	ID=gene-AC56_RS03725;Name=yidF;gbkey=Gene;gene=yidF;gene_biotype=protein_coding;locus_tag=AC56_RS03725;old_locus_tag=AC56_4109
NZ_JJLS01000277.1	Protein Homology	CDS	12683	13180	.	-	0	ID=cds-WP_000148063.1;Parent=gene-AC56_RS03725;Dbxref=GenBank:WP_000148063.1;Name=WP_000148063.1;gbkey=CDS;gene=yidF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709521.1;locus_tag=AC56_RS03725;product=radical SAM protein;protein_id=WP_000148063.1;transl_table=11
NZ_JJLS01000277.1	RefSeq	gene	13177	13539	.	-	.	ID=gene-AC56_RS03720;Name=yidG;gbkey=Gene;gene=yidG;gene_biotype=protein_coding;locus_tag=AC56_RS03720;old_locus_tag=AC56_4110
NZ_JJLS01000277.1	Protein Homology	CDS	13177	13539	.	-	0	ID=cds-WP_001113432.1;Parent=gene-AC56_RS03720;Dbxref=GenBank:WP_001113432.1;Name=WP_001113432.1;gbkey=CDS;gene=yidG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312643.1;locus_tag=AC56_RS03720;product=DUF202 domain-containing protein;protein_id=WP_001113432.1;transl_table=11
NZ_JJLS01000277.1	RefSeq	gene	13529	13876	.	-	.	ID=gene-AC56_RS03715;Name=yidH;gbkey=Gene;gene=yidH;gene_biotype=protein_coding;locus_tag=AC56_RS03715;old_locus_tag=AC56_4111
NZ_JJLS01000277.1	Protein Homology	CDS	13529	13876	.	-	0	ID=cds-WP_001027452.1;Parent=gene-AC56_RS03715;Dbxref=GenBank:WP_001027452.1;Name=WP_001027452.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yidH;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312644.1;locus_tag=AC56_RS03715;product=YidH family protein;protein_id=WP_001027452.1;transl_table=11
NZ_JJLS01000277.1	RefSeq	gene	14047	14645	.	-	.	ID=gene-AC56_RS0127255;Name=AC56_RS0127255;end_range=14645,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0127255;old_locus_tag=AC56_4112;partial=true
NZ_JJLS01000277.1	Protein Homology	CDS	14047	14645	.	-	2	ID=cds-WP_032282907.1;Parent=gene-AC56_RS0127255;Dbxref=GenBank:WP_032282907.1;Name=WP_032282907.1;Ontology_term=GO:0006310,GO:0032196,GO:0003677,GO:0004519,GO:0046872;end_range=14645,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415949.3;locus_tag=AC56_RS0127255;partial=true;product=RNA-guided endonuclease InsQ/TnpB family protein;protein_id=WP_032282907.1;transl_table=11
##sequence-region NZ_JJLS01000278.1 1 38231
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000278.1	RefSeq	region	1	38231	.	+	.	ID=NZ_JJLS01000278.1:1..38231;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000278.1	RefSeq	pseudogene	1	408	.	-	.	ID=gene-AC56_RS03710;Name=AC56_RS03710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS03710;old_locus_tag=AC56_4114;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000278.1	Protein Homology	CDS	1	408	.	-	0	ID=cds-AC56_RS03710;Parent=gene-AC56_RS03710;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS03710;partial=true;product=IS4 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000278.1	RefSeq	pseudogene	510	584	.	+	.	ID=gene-AC56_RS33440;Name=AC56_RS33440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33440;partial=true;pseudo=true;start_range=.,510
NZ_JJLS01000278.1	Protein Homology	CDS	510	584	.	+	0	ID=cds-AC56_RS33440;Parent=gene-AC56_RS33440;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709516.1;locus_tag=AC56_RS33440;partial=true;product=hypothetical protein;pseudo=true;start_range=.,510;transl_table=11
NZ_JJLS01000278.1	RefSeq	gene	581	1903	.	-	.	ID=gene-AC56_RS03705;Name=AC56_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS03705;old_locus_tag=AC56_4115
NZ_JJLS01000278.1	Protein Homology	CDS	581	1903	.	-	0	ID=cds-WP_000160104.1;Parent=gene-AC56_RS03705;Dbxref=GenBank:WP_000160104.1;Name=WP_000160104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312649.2;locus_tag=AC56_RS03705;product=6-phospho-alpha-glucosidase;protein_id=WP_000160104.1;transl_table=11
NZ_JJLS01000278.1	RefSeq	gene	1903	3519	.	-	.	ID=gene-AC56_RS03700;Name=AC56_RS03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS03700;old_locus_tag=AC56_4116
NZ_JJLS01000278.1	Protein Homology	CDS	1903	3519	.	-	0	ID=cds-WP_032279171.1;Parent=gene-AC56_RS03700;Dbxref=GenBank:WP_032279171.1;Name=WP_032279171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312650.2;locus_tag=AC56_RS03700;product=PTS sugar transporter subunit IIB;protein_id=WP_032279171.1;transl_table=11
NZ_JJLS01000278.1	RefSeq	gene	3815	4531	.	+	.	ID=gene-AC56_RS03695;Name=yidP;gbkey=Gene;gene=yidP;gene_biotype=protein_coding;locus_tag=AC56_RS03695;old_locus_tag=AC56_4117
NZ_JJLS01000278.1	Protein Homology	CDS	3815	4531	.	+	0	ID=cds-WP_032279173.1;Parent=gene-AC56_RS03695;Dbxref=GenBank:WP_032279173.1;Name=WP_032279173.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=yidP;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418139.1;locus_tag=AC56_RS03695;product=GntR family transcriptional regulator;protein_id=WP_032279173.1;transl_table=11
NZ_JJLS01000278.1	RefSeq	gene	4528	6189	.	-	.	ID=gene-AC56_RS03690;Name=yidE;gbkey=Gene;gene=yidE;gene_biotype=protein_coding;locus_tag=AC56_RS03690;old_locus_tag=AC56_4118
NZ_JJLS01000278.1	Protein Homology	CDS	4528	6189	.	-	0	ID=cds-WP_032279174.1;Parent=gene-AC56_RS03690;Dbxref=GenBank:WP_032279174.1;Name=WP_032279174.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;gene=yidE;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312652.2;locus_tag=AC56_RS03690;product=putative transporter;protein_id=WP_032279174.1;transl_table=11
NZ_JJLS01000278.1	RefSeq	gene	6385	6813	.	-	.	ID=gene-AC56_RS03680;Name=ibpB;gbkey=Gene;gene=ibpB;gene_biotype=protein_coding;locus_tag=AC56_RS03680;old_locus_tag=AC56_4120
NZ_JJLS01000278.1	Protein Homology	CDS	6385	6813	.	-	0	ID=cds-WP_001243431.1;Parent=gene-AC56_RS03680;Dbxref=GenBank:WP_001243431.1;Name=WP_001243431.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpB;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709512.2;locus_tag=AC56_RS03680;product=small heat shock chaperone IbpB;protein_id=WP_001243431.1;transl_table=11
NZ_JJLS01000278.1	RefSeq	gene	6925	7338	.	-	.	ID=gene-AC56_RS03675;Name=ibpA;gbkey=Gene;gene=ibpA;gene_biotype=protein_coding;locus_tag=AC56_RS03675;old_locus_tag=AC56_4121
NZ_JJLS01000278.1	Protein Homology	CDS	6925	7338	.	-	0	ID=cds-WP_001243437.1;Parent=gene-AC56_RS03675;Dbxref=GenBank:WP_001243437.1;Name=WP_001243437.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpA;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687722.1;locus_tag=AC56_RS03675;product=small heat shock chaperone IbpA;protein_id=WP_001243437.1;transl_table=11
NZ_JJLS01000278.1	cmsearch	sequence_feature	7332	7404	.	-	.	ID=id-NZ_JJLS01000278.1:7332..7404;Dbxref=RFAM:RF01832;Note=ROSE (Repression Of Heat Shock gene Expression) occurs in the 5'-region of heat shock genes and acts as an RNA thermometer to modulate expression.;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5
NZ_JJLS01000278.1	RefSeq	gene	7644	7976	.	+	.	ID=gene-AC56_RS03670;Name=yidQ;gbkey=Gene;gene=yidQ;gene_biotype=protein_coding;locus_tag=AC56_RS03670;old_locus_tag=AC56_4122
NZ_JJLS01000278.1	Protein Homology	CDS	7644	7976	.	+	0	ID=cds-WP_000620888.1;Parent=gene-AC56_RS03670;Dbxref=GenBank:WP_000620888.1;Name=WP_000620888.1;gbkey=CDS;gene=yidQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418143.2;locus_tag=AC56_RS03670;product=YceK/YidQ family lipoprotein;protein_id=WP_000620888.1;transl_table=11
NZ_JJLS01000278.1	RefSeq	gene	7978	9192	.	-	.	ID=gene-AC56_RS03665;Name=yidR;gbkey=Gene;gene=yidR;gene_biotype=protein_coding;locus_tag=AC56_RS03665;old_locus_tag=AC56_4123
NZ_JJLS01000278.1	Protein Homology	CDS	7978	9192	.	-	0	ID=cds-WP_032279175.1;Parent=gene-AC56_RS03665;Dbxref=GenBank:WP_032279175.1;Name=WP_032279175.1;gbkey=CDS;gene=yidR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312656.3;locus_tag=AC56_RS03665;product=DUF3748 domain-containing protein;protein_id=WP_032279175.1;transl_table=11
NZ_JJLS01000278.1	RefSeq	gene	9293	10357	.	+	.	ID=gene-AC56_RS03660;Name=cbrA;gbkey=Gene;gene=cbrA;gene_biotype=protein_coding;locus_tag=AC56_RS03660;old_locus_tag=AC56_4124
NZ_JJLS01000278.1	Protein Homology	CDS	9293	10357	.	+	0	ID=cds-WP_032279182.1;Parent=gene-AC56_RS03660;Dbxref=GenBank:WP_032279182.1;Name=WP_032279182.1;gbkey=CDS;gene=cbrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418145.2;locus_tag=AC56_RS03660;product=colicin M resistance lipid reductase CbrA;protein_id=WP_032279182.1;transl_table=11
NZ_JJLS01000278.1	RefSeq	gene	10354	11691	.	-	.	ID=gene-AC56_RS03655;Name=dgoT;gbkey=Gene;gene=dgoT;gene_biotype=protein_coding;locus_tag=AC56_RS03655;old_locus_tag=AC56_4125
NZ_JJLS01000278.1	Protein Homology	CDS	10354	11691	.	-	0	ID=cds-WP_000253455.1;Parent=gene-AC56_RS03655;Dbxref=GenBank:WP_000253455.1;Name=WP_000253455.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=dgoT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709507.1;locus_tag=AC56_RS03655;product=MFS transporter;protein_id=WP_000253455.1;transl_table=11
NZ_JJLS01000278.1	RefSeq	gene	11766	12914	.	-	.	ID=gene-AC56_RS03650;Name=dgoD;gbkey=Gene;gene=dgoD;gene_biotype=protein_coding;locus_tag=AC56_RS03650;old_locus_tag=AC56_4126
NZ_JJLS01000278.1	Protein Homology	CDS	11766	12914	.	-	0	ID=cds-WP_000705001.1;Parent=gene-AC56_RS03650;Dbxref=GenBank:WP_000705001.1;Name=WP_000705001.1;Ontology_term=GO:0009063,GO:0008869;gbkey=CDS;gene=dgoD;go_function=galactonate dehydratase activity|0008869||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020077623.1;locus_tag=AC56_RS03650;product=galactonate dehydratase;protein_id=WP_000705001.1;transl_table=11
NZ_JJLS01000278.1	RefSeq	gene	12911	13528	.	-	.	ID=gene-AC56_RS03645;Name=dgoA;gbkey=Gene;gene=dgoA;gene_biotype=protein_coding;locus_tag=AC56_RS03645;old_locus_tag=AC56_4127
NZ_JJLS01000278.1	Protein Homology	CDS	12911	13528	.	-	0	ID=cds-WP_001198722.1;Parent=gene-AC56_RS03645;Dbxref=GenBank:WP_001198722.1;Name=WP_001198722.1;gbkey=CDS;gene=dgoA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026238.1;locus_tag=AC56_RS03645;product=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;protein_id=WP_001198722.1;transl_table=11
NZ_JJLS01000278.1	RefSeq	gene	13512	14390	.	-	.	ID=gene-AC56_RS03640;Name=dgoK;gbkey=Gene;gene=dgoK;gene_biotype=protein_coding;locus_tag=AC56_RS03640;old_locus_tag=AC56_4128
NZ_JJLS01000278.1	Protein Homology	CDS	13512	14390	.	-	0	ID=cds-WP_000127091.1;Parent=gene-AC56_RS03640;Dbxref=GenBank:WP_000127091.1;Name=WP_000127091.1;gbkey=CDS;gene=dgoK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418148.1;locus_tag=AC56_RS03640;product=2-dehydro-3-deoxygalactonokinase;protein_id=WP_000127091.1;transl_table=11
NZ_JJLS01000278.1	RefSeq	gene	14387	15076	.	-	.	ID=gene-AC56_RS03635;Name=dgoR;gbkey=Gene;gene=dgoR;gene_biotype=protein_coding;locus_tag=AC56_RS03635;old_locus_tag=AC56_4129
NZ_JJLS01000278.1	Protein Homology	CDS	14387	15076	.	-	0	ID=cds-WP_000174305.1;Parent=gene-AC56_RS03635;Dbxref=GenBank:WP_000174305.1;Name=WP_000174305.1;gbkey=CDS;gene=dgoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709505.1;locus_tag=AC56_RS03635;product=D-galactonate utilization transcriptional regulator DgoR;protein_id=WP_000174305.1;transl_table=11
NZ_JJLS01000278.1	RefSeq	gene	15354	16010	.	+	.	ID=gene-AC56_RS03630;Name=yidX;gbkey=Gene;gene=yidX;gene_biotype=protein_coding;locus_tag=AC56_RS03630;old_locus_tag=AC56_4130
NZ_JJLS01000278.1	Protein Homology	CDS	15354	16010	.	+	0	ID=cds-WP_032279176.1;Parent=gene-AC56_RS03630;Dbxref=GenBank:WP_032279176.1;Name=WP_032279176.1;gbkey=CDS;gene=yidX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709504.1;locus_tag=AC56_RS03630;product=protein YidX;protein_id=WP_032279176.1;transl_table=11
NZ_JJLS01000278.1	RefSeq	gene	16056	16868	.	-	.	ID=gene-AC56_RS03625;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=AC56_RS03625;old_locus_tag=AC56_4131
NZ_JJLS01000278.1	Protein Homology	CDS	16056	16868	.	-	0	ID=cds-WP_000985541.1;Parent=gene-AC56_RS03625;Dbxref=GenBank:WP_000985541.1;Name=WP_000985541.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418152.1;locus_tag=AC56_RS03625;product=sugar-phosphatase;protein_id=WP_000985541.1;transl_table=11
NZ_JJLS01000278.1	RefSeq	gene	16983	17381	.	-	.	ID=gene-AC56_RS03620;Name=yidB;gbkey=Gene;gene=yidB;gene_biotype=protein_coding;locus_tag=AC56_RS03620;old_locus_tag=AC56_4132
NZ_JJLS01000278.1	Protein Homology	CDS	16983	17381	.	-	0	ID=cds-WP_000522210.1;Parent=gene-AC56_RS03620;Dbxref=GenBank:WP_000522210.1;Name=WP_000522210.1;gbkey=CDS;gene=yidB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418153.4;locus_tag=AC56_RS03620;product=YidB family protein;protein_id=WP_000522210.1;transl_table=11
NZ_JJLS01000278.1	RefSeq	gene	17621	20035	.	-	.	ID=gene-AC56_RS03615;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=AC56_RS03615;old_locus_tag=AC56_4133
NZ_JJLS01000278.1	Protein Homology	CDS	17621	20035	.	-	0	ID=cds-WP_000072067.1;Parent=gene-AC56_RS03615;Dbxref=GenBank:WP_000072067.1;Name=WP_000072067.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1;locus_tag=AC56_RS03615;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_000072067.1;transl_table=11
NZ_JJLS01000278.1	RefSeq	gene	20064	21137	.	-	.	ID=gene-AC56_RS03610;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=AC56_RS03610;old_locus_tag=AC56_4134
NZ_JJLS01000278.1	Protein Homology	CDS	20064	21137	.	-	0	ID=cds-WP_000060112.1;Parent=gene-AC56_RS03610;Dbxref=GenBank:WP_000060112.1;Name=WP_000060112.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121479.1;locus_tag=AC56_RS03610;product=DNA replication/repair protein RecF;protein_id=WP_000060112.1;transl_table=11
NZ_JJLS01000278.1	RefSeq	gene	21137	22237	.	-	.	ID=gene-AC56_RS03605;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=AC56_RS03605;old_locus_tag=AC56_4135
NZ_JJLS01000278.1	Protein Homology	CDS	21137	22237	.	-	0	ID=cds-WP_000673464.1;Parent=gene-AC56_RS03605;Dbxref=GenBank:WP_000673464.1;Name=WP_000673464.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=AC56_RS03605;product=DNA polymerase III subunit beta;protein_id=WP_000673464.1;transl_table=11
NZ_JJLS01000278.1	RefSeq	gene	22242	23645	.	-	.	ID=gene-AC56_RS03600;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=AC56_RS03600;old_locus_tag=AC56_4136
NZ_JJLS01000278.1	Protein Homology	CDS	22242	23645	.	-	0	ID=cds-WP_000059111.1;Parent=gene-AC56_RS03600;Dbxref=GenBank:WP_000059111.1;Name=WP_000059111.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418157.1;locus_tag=AC56_RS03600;product=chromosomal replication initiator protein DnaA;protein_id=WP_000059111.1;transl_table=11
NZ_JJLS01000278.1	RefSeq	gene	23942	24022	.	+	.	ID=gene-AC56_RS32855;Name=AC56_RS32855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS32855
NZ_JJLS01000278.1	Protein Homology	CDS	23942	24022	.	+	0	ID=cds-WP_120795392.1;Parent=gene-AC56_RS32855;Dbxref=GenBank:WP_120795392.1;Name=WP_120795392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518826.1;locus_tag=AC56_RS32855;product=protein YsdD;protein_id=WP_120795392.1;transl_table=11
NZ_JJLS01000278.1	RefSeq	gene	24252	24392	.	+	.	ID=gene-AC56_RS03595;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=AC56_RS03595;old_locus_tag=AC56_4137
NZ_JJLS01000278.1	Protein Homology	CDS	24252	24392	.	+	0	ID=cds-WP_000831330.1;Parent=gene-AC56_RS03595;Dbxref=GenBank:WP_000831330.1;Name=WP_000831330.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1;locus_tag=AC56_RS03595;product=50S ribosomal protein L34;protein_id=WP_000831330.1;transl_table=11
NZ_JJLS01000278.1	RefSeq	gene	24409	24768	.	+	.	ID=gene-AC56_RS0127265;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=AC56_RS0127265
NZ_JJLS01000278.1	Protein Homology	CDS	24409	24768	.	+	0	ID=cds-WP_000239730.1;Parent=gene-AC56_RS0127265;Dbxref=GenBank:WP_000239730.1;Name=WP_000239730.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172301.1;locus_tag=AC56_RS0127265;product=ribonuclease P protein component;protein_id=WP_000239730.1;transl_table=11
NZ_JJLS01000278.1	RefSeq	gene	24732	24989	.	+	.	ID=gene-AC56_RS0127270;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=AC56_RS0127270
NZ_JJLS01000278.1	Protein Homology	CDS	24732	24989	.	+	0	ID=cds-WP_001307474.1;Parent=gene-AC56_RS0127270;Dbxref=GenBank:WP_001307474.1;Name=WP_001307474.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462741.1;locus_tag=AC56_RS0127270;product=membrane protein insertion efficiency factor YidD;protein_id=WP_001307474.1;transl_table=11
NZ_JJLS01000278.1	RefSeq	gene	24992	26638	.	+	.	ID=gene-AC56_RS03590;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=AC56_RS03590;old_locus_tag=AC56_4139
NZ_JJLS01000278.1	Protein Homology	CDS	24992	26638	.	+	0	ID=cds-WP_000378250.1;Parent=gene-AC56_RS03590;Dbxref=GenBank:WP_000378250.1;Name=WP_000378250.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418161.1;locus_tag=AC56_RS03590;product=membrane protein insertase YidC;protein_id=WP_000378250.1;transl_table=11
NZ_JJLS01000278.1	RefSeq	gene	26744	28108	.	+	.	ID=gene-AC56_RS03585;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=AC56_RS03585;old_locus_tag=AC56_4140
NZ_JJLS01000278.1	Protein Homology	CDS	26744	28108	.	+	0	ID=cds-WP_001282346.1;Parent=gene-AC56_RS03585;Dbxref=GenBank:WP_001282346.1;Name=WP_001282346.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418162.1;locus_tag=AC56_RS03585;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_001282346.1;transl_table=11
NZ_JJLS01000278.1	RefSeq	gene	28351	28425	.	+	.	ID=gene-AC56_RS0127275;Name=tnaC;gbkey=Gene;gene=tnaC;gene_biotype=protein_coding;locus_tag=AC56_RS0127275
NZ_JJLS01000278.1	Protein Homology	CDS	28351	28425	.	+	0	ID=cds-WP_001364348.1;Parent=gene-AC56_RS0127275;Dbxref=GenBank:WP_001364348.1;Name=WP_001364348.1;Ontology_term=GO:0006569,GO:0031554,GO:0031556;gbkey=CDS;gene=tnaC;go_process=L-tryptophan catabolic process|0006569||IEA,regulation of termination of DNA-templated transcription|0031554||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312671.1;locus_tag=AC56_RS0127275;product=tryptophanase leader peptide;protein_id=WP_001364348.1;transl_table=11
NZ_JJLS01000278.1	RefSeq	gene	28646	30061	.	+	.	ID=gene-AC56_RS03580;Name=tnaA;gbkey=Gene;gene=tnaA;gene_biotype=protein_coding;locus_tag=AC56_RS03580;old_locus_tag=AC56_4141
NZ_JJLS01000278.1	Protein Homology	CDS	28646	30061	.	+	0	ID=cds-WP_001295247.1;Parent=gene-AC56_RS03580;Dbxref=GenBank:WP_001295247.1;Name=WP_001295247.1;Ontology_term=GO:0006568,GO:0009034;gbkey=CDS;gene=tnaA;go_function=tryptophanase activity|0009034||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709490.2;locus_tag=AC56_RS03580;product=tryptophanase;protein_id=WP_001295247.1;transl_table=11
NZ_JJLS01000278.1	RefSeq	gene	30152	31399	.	+	.	ID=gene-AC56_RS03575;Name=tnaB;gbkey=Gene;gene=tnaB;gene_biotype=protein_coding;locus_tag=AC56_RS03575;old_locus_tag=AC56_4142
NZ_JJLS01000278.1	Protein Homology	CDS	30152	31399	.	+	0	ID=cds-WP_000131911.1;Parent=gene-AC56_RS03575;Dbxref=GenBank:WP_000131911.1;Name=WP_000131911.1;gbkey=CDS;gene=tnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312673.1;locus_tag=AC56_RS03575;product=low affinity tryptophan permease TnaB;protein_id=WP_000131911.1;transl_table=11
NZ_JJLS01000278.1	RefSeq	gene	31532	32707	.	+	.	ID=gene-AC56_RS03570;Name=mdtL;gbkey=Gene;gene=mdtL;gene_biotype=protein_coding;locus_tag=AC56_RS03570;old_locus_tag=AC56_4143
NZ_JJLS01000278.1	Protein Homology	CDS	31532	32707	.	+	0	ID=cds-WP_000085987.1;Parent=gene-AC56_RS03570;Dbxref=GenBank:WP_000085987.1;Name=WP_000085987.1;gbkey=CDS;gene=mdtL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418166.1;locus_tag=AC56_RS03570;product=multidrug efflux MFS transporter MdtL;protein_id=WP_000085987.1;transl_table=11
NZ_JJLS01000278.1	RefSeq	gene	32682	33641	.	+	.	ID=gene-AC56_RS03565;Name=yidZ;gbkey=Gene;gene=yidZ;gene_biotype=protein_coding;locus_tag=AC56_RS03565;old_locus_tag=AC56_4144
NZ_JJLS01000278.1	Protein Homology	CDS	32682	33641	.	+	0	ID=cds-WP_000748502.1;Parent=gene-AC56_RS03565;Dbxref=GenBank:WP_000748502.1;Name=WP_000748502.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yidZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418167.1;locus_tag=AC56_RS03565;product=HTH-type transcriptional regulator YidZ;protein_id=WP_000748502.1;transl_table=11
NZ_JJLS01000278.1	RefSeq	gene	33798	34547	.	+	.	ID=gene-AC56_RS0127280;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=AC56_RS0127280;old_locus_tag=AC56_4145
NZ_JJLS01000278.1	Protein Homology	CDS	33798	34547	.	+	0	ID=cds-WP_000190670.1;Parent=gene-AC56_RS0127280;Dbxref=GenBank:WP_000190670.1;Name=WP_000190670.1;Ontology_term=GO:0008897;gbkey=CDS;gene=yieE;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709485.2;locus_tag=AC56_RS0127280;product=4'-phosphopantetheinyl transferase family protein;protein_id=WP_000190670.1;transl_table=11
NZ_JJLS01000278.1	RefSeq	gene	34569	35135	.	+	.	ID=gene-AC56_RS03560;Name=yieF;gbkey=Gene;gene=yieF;gene_biotype=protein_coding;gene_synonym=chrR;locus_tag=AC56_RS03560;old_locus_tag=AC56_4146
NZ_JJLS01000278.1	Protein Homology	CDS	34569	35135	.	+	0	ID=cds-WP_032204283.1;Parent=gene-AC56_RS03560;Dbxref=GenBank:WP_032204283.1;Name=WP_032204283.1;gbkey=CDS;gene=yieF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312677.1;locus_tag=AC56_RS03560;product=class I chromate reductase YieF;protein_id=WP_032204283.1;transl_table=11
NZ_JJLS01000278.1	RefSeq	gene	35189	36526	.	-	.	ID=gene-AC56_RS03555;Name=adeP;gbkey=Gene;gene=adeP;gene_biotype=protein_coding;locus_tag=AC56_RS03555;old_locus_tag=AC56_4147
NZ_JJLS01000278.1	Protein Homology	CDS	35189	36526	.	-	0	ID=cds-WP_000019348.1;Parent=gene-AC56_RS03555;Dbxref=GenBank:WP_000019348.1;Name=WP_000019348.1;gbkey=CDS;gene=adeP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418170.1;locus_tag=AC56_RS03555;product=adenine permease AdeP;protein_id=WP_000019348.1;transl_table=11
NZ_JJLS01000278.1	RefSeq	gene	36691	37356	.	+	.	ID=gene-AC56_RS03550;Name=yieH;gbkey=Gene;gene=yieH;gene_biotype=protein_coding;locus_tag=AC56_RS03550;old_locus_tag=AC56_4148
NZ_JJLS01000278.1	Protein Homology	CDS	36691	37356	.	+	0	ID=cds-WP_032279181.1;Parent=gene-AC56_RS03550;Dbxref=GenBank:WP_032279181.1;Name=WP_032279181.1;gbkey=CDS;gene=yieH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418171.1;locus_tag=AC56_RS03550;product=6-phosphogluconate phosphatase;protein_id=WP_032279181.1;transl_table=11
NZ_JJLS01000278.1	RefSeq	pseudogene	37423	37797	.	+	.	ID=gene-AC56_RS0127285;Name=AC56_RS0127285;end_range=37797,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0127285;partial=true;pseudo=true
NZ_JJLS01000278.1	Protein Homology	CDS	37423	37797	.	+	0	ID=cds-AC56_RS0127285;Parent=gene-AC56_RS0127285;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=37797,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709481.1;locus_tag=AC56_RS0127285;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_JJLS01000278.1	RefSeq	gene	37830	38231	.	+	.	ID=gene-AC56_RS03545;Name=AC56_RS03545;end_range=38231,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS03545;old_locus_tag=AC56_4150;partial=true
NZ_JJLS01000278.1	Protein Homology	CDS	37830	38231	.	+	0	ID=cds-WP_131127677.1;Parent=gene-AC56_RS03545;Dbxref=GenBank:WP_131127677.1;Name=WP_131127677.1;end_range=38231,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS03545;partial=true;product=transposase;protein_id=WP_131127677.1;transl_table=11
##sequence-region NZ_JJLS01000279.1 1 45179
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000279.1	RefSeq	region	1	45179	.	+	.	ID=NZ_JJLS01000279.1:1..45179;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000279.1	RefSeq	gene	1	323	.	+	.	ID=gene-AC56_RS0127290;Name=AC56_RS0127290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0127290;old_locus_tag=AC56_4151;partial=true;start_range=.,1
NZ_JJLS01000279.1	Protein Homology	CDS	1	323	.	+	2	ID=cds-WP_032278219.1;Parent=gene-AC56_RS0127290;Dbxref=GenBank:WP_032278219.1;Name=WP_032278219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS0127290;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032278219.1;start_range=.,1;transl_table=11
NZ_JJLS01000279.1	RefSeq	pseudogene	380	487	.	+	.	ID=gene-AC56_RS33445;Name=AC56_RS33445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33445;partial=true;pseudo=true;start_range=.,380
NZ_JJLS01000279.1	Protein Homology	CDS	380	487	.	+	0	ID=cds-AC56_RS33445;Parent=gene-AC56_RS33445;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709481.1;locus_tag=AC56_RS33445;partial=true;product=hypothetical protein;pseudo=true;start_range=.,380;transl_table=11
NZ_JJLS01000279.1	RefSeq	gene	564	1280	.	-	.	ID=gene-AC56_RS03540;Name=yieK;gbkey=Gene;gene=yieK;gene_biotype=protein_coding;locus_tag=AC56_RS03540;old_locus_tag=AC56_4152
NZ_JJLS01000279.1	Protein Homology	CDS	564	1280	.	-	0	ID=cds-WP_032279185.1;Parent=gene-AC56_RS03540;Dbxref=GenBank:WP_032279185.1;Name=WP_032279185.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=yieK;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001384841.1;locus_tag=AC56_RS03540;product=glucosamine-6-phosphate deaminase;protein_id=WP_032279185.1;transl_table=11
NZ_JJLS01000279.1	RefSeq	gene	1295	2464	.	-	.	ID=gene-AC56_RS03535;Name=yieL;gbkey=Gene;gene=yieL;gene_biotype=protein_coding;locus_tag=AC56_RS03535;old_locus_tag=AC56_4153
NZ_JJLS01000279.1	Protein Homology	CDS	1295	2464	.	-	0	ID=cds-WP_032279186.1;Parent=gene-AC56_RS03535;Dbxref=GenBank:WP_032279186.1;Name=WP_032279186.1;gbkey=CDS;gene=yieL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418175.3;locus_tag=AC56_RS03535;product=esterase;protein_id=WP_032279186.1;transl_table=11
NZ_JJLS01000279.1	RefSeq	gene	2491	4107	.	-	.	ID=gene-AC56_RS03530;Name=bglH;gbkey=Gene;gene=bglH;gene_biotype=protein_coding;locus_tag=AC56_RS03530;old_locus_tag=AC56_4154
NZ_JJLS01000279.1	Protein Homology	CDS	2491	4107	.	-	0	ID=cds-WP_000489871.1;Parent=gene-AC56_RS03530;Dbxref=GenBank:WP_000489871.1;Name=WP_000489871.1;gbkey=CDS;gene=bglH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418176.1;locus_tag=AC56_RS03530;product=carbohydrate-specific porin BglH;protein_id=WP_000489871.1;transl_table=11
NZ_JJLS01000279.1	RefSeq	gene	4193	5587	.	-	.	ID=gene-AC56_RS03525;Name=bglB;gbkey=Gene;gene=bglB;gene_biotype=protein_coding;locus_tag=AC56_RS03525;old_locus_tag=AC56_4155
NZ_JJLS01000279.1	Protein Homology	CDS	4193	5587	.	-	0	ID=cds-WP_000643218.1;Parent=gene-AC56_RS03525;Dbxref=GenBank:WP_000643218.1;Name=WP_000643218.1;gbkey=CDS;gene=bglB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469563.1;locus_tag=AC56_RS03525;product=6-phospho-beta-glucosidase BglB;protein_id=WP_000643218.1;transl_table=11
NZ_JJLS01000279.1	RefSeq	gene	5606	7483	.	-	.	ID=gene-AC56_RS03520;Name=bglF;gbkey=Gene;gene=bglF;gene_biotype=protein_coding;locus_tag=AC56_RS03520;old_locus_tag=AC56_4156
NZ_JJLS01000279.1	Protein Homology	CDS	5606	7483	.	-	0	ID=cds-WP_032279187.1;Parent=gene-AC56_RS03520;Dbxref=GenBank:WP_032279187.1;Name=WP_032279187.1;gbkey=CDS;gene=bglF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418178.1;locus_tag=AC56_RS03520;product=PTS beta-glucoside transporter subunit IIABC;protein_id=WP_032279187.1;transl_table=11
NZ_JJLS01000279.1	RefSeq	gene	7617	8453	.	-	.	ID=gene-AC56_RS03515;Name=bglG;gbkey=Gene;gene=bglG;gene_biotype=protein_coding;locus_tag=AC56_RS03515;old_locus_tag=AC56_4157
NZ_JJLS01000279.1	Protein Homology	CDS	7617	8453	.	-	0	ID=cds-WP_001295251.1;Parent=gene-AC56_RS03515;Dbxref=GenBank:WP_001295251.1;Name=WP_001295251.1;Ontology_term=GO:0006355;gbkey=CDS;gene=bglG;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418179.1;locus_tag=AC56_RS03515;product=transcriptional antiterminator BglG;protein_id=WP_001295251.1;transl_table=11
NZ_JJLS01000279.1	RefSeq	gene	8739	9464	.	-	.	ID=gene-AC56_RS03510;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=AC56_RS03510;old_locus_tag=AC56_4159
NZ_JJLS01000279.1	Protein Homology	CDS	8739	9464	.	-	0	ID=cds-WP_032279188.1;Parent=gene-AC56_RS03510;Dbxref=GenBank:WP_032279188.1;Name=WP_032279188.1;Ontology_term=GO:0030643;gbkey=CDS;gene=phoU;go_process=intracellular phosphate ion homeostasis|0030643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418180.1;locus_tag=AC56_RS03510;product=phosphate signaling complex protein PhoU;protein_id=WP_032279188.1;transl_table=11
NZ_JJLS01000279.1	RefSeq	gene	9479	10252	.	-	.	ID=gene-AC56_RS03505;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=AC56_RS03505;old_locus_tag=AC56_4160
NZ_JJLS01000279.1	Protein Homology	CDS	9479	10252	.	-	0	ID=cds-WP_000063125.1;Parent=gene-AC56_RS03505;Dbxref=GenBank:WP_000063125.1;Name=WP_000063125.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063125.1;locus_tag=AC56_RS03505;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_000063125.1;transl_table=11
NZ_JJLS01000279.1	RefSeq	gene	10435	11325	.	-	.	ID=gene-AC56_RS03500;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=AC56_RS03500;old_locus_tag=AC56_4161
NZ_JJLS01000279.1	Protein Homology	CDS	10435	11325	.	-	0	ID=cds-WP_001251991.1;Parent=gene-AC56_RS03500;Dbxref=GenBank:WP_001251991.1;Name=WP_001251991.1;Ontology_term=GO:0035435,GO:0005886;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312689.1;locus_tag=AC56_RS03500;product=phosphate ABC transporter permease PstA;protein_id=WP_001251991.1;transl_table=11
NZ_JJLS01000279.1	RefSeq	gene	11325	12284	.	-	.	ID=gene-AC56_RS03495;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=AC56_RS03495;old_locus_tag=AC56_4162
NZ_JJLS01000279.1	Protein Homology	CDS	11325	12284	.	-	0	ID=cds-WP_000741620.1;Parent=gene-AC56_RS03495;Dbxref=GenBank:WP_000741620.1;Name=WP_000741620.1;Ontology_term=GO:0006817,GO:0055085,GO:0016020;gbkey=CDS;gene=pstC;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806729.1;locus_tag=AC56_RS03495;product=phosphate ABC transporter permease PstC;protein_id=WP_000741620.1;transl_table=11
NZ_JJLS01000279.1	RefSeq	gene	12370	13410	.	-	.	ID=gene-AC56_RS03490;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=AC56_RS03490;old_locus_tag=AC56_4163
NZ_JJLS01000279.1	Protein Homology	CDS	12370	13410	.	-	0	ID=cds-WP_000867146.1;Parent=gene-AC56_RS03490;Dbxref=GenBank:WP_000867146.1;Name=WP_000867146.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418184.1;locus_tag=AC56_RS03490;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_000867146.1;transl_table=11
NZ_JJLS01000279.1	RefSeq	gene	13724	15553	.	-	.	ID=gene-AC56_RS03485;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=AC56_RS03485;old_locus_tag=AC56_4164
NZ_JJLS01000279.1	Protein Homology	CDS	13724	15553	.	-	0	ID=cds-WP_000334086.1;Parent=gene-AC56_RS03485;Dbxref=GenBank:WP_000334086.1;Name=WP_000334086.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=AC56_RS03485;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_000334086.1;transl_table=11
NZ_JJLS01000279.1	RefSeq	gene	15715	17085	.	-	.	ID=gene-AC56_RS03480;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=AC56_RS03480;old_locus_tag=AC56_4165
NZ_JJLS01000279.1	Protein Homology	CDS	15715	17085	.	-	0	ID=cds-WP_000933719.1;Parent=gene-AC56_RS03480;Dbxref=GenBank:WP_000933719.1;Name=WP_000933719.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312699.1;locus_tag=AC56_RS03480;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_000933719.1;transl_table=11
NZ_JJLS01000279.1	RefSeq	gene	17436	17855	.	-	.	ID=gene-AC56_RS03475;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=AC56_RS03475;old_locus_tag=AC56_4166
NZ_JJLS01000279.1	Protein Homology	CDS	17436	17855	.	-	0	ID=cds-WP_001251965.1;Parent=gene-AC56_RS03475;Dbxref=GenBank:WP_001251965.1;Name=WP_001251965.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;gene=atpC;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251972.1;locus_tag=AC56_RS03475;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_001251965.1;transl_table=11
NZ_JJLS01000279.1	RefSeq	gene	17876	19258	.	-	.	ID=gene-AC56_RS03470;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=AC56_RS03470;old_locus_tag=AC56_4167
NZ_JJLS01000279.1	Protein Homology	CDS	17876	19258	.	-	0	ID=cds-WP_000190506.1;Parent=gene-AC56_RS03470;Dbxref=GenBank:WP_000190506.1;Name=WP_000190506.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800291.1;locus_tag=AC56_RS03470;product=F0F1 ATP synthase subunit beta;protein_id=WP_000190506.1;transl_table=11
NZ_JJLS01000279.1	RefSeq	gene	19285	20148	.	-	.	ID=gene-AC56_RS03465;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=AC56_RS03465;old_locus_tag=AC56_4168
NZ_JJLS01000279.1	Protein Homology	CDS	19285	20148	.	-	0	ID=cds-WP_000896498.1;Parent=gene-AC56_RS03465;Dbxref=GenBank:WP_000896498.1;Name=WP_000896498.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882764.1;locus_tag=AC56_RS03465;product=F0F1 ATP synthase subunit gamma;protein_id=WP_000896498.1;transl_table=11
NZ_JJLS01000279.1	RefSeq	gene	20199	21740	.	-	.	ID=gene-AC56_RS03460;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=AC56_RS03460;old_locus_tag=AC56_4169
NZ_JJLS01000279.1	Protein Homology	CDS	20199	21740	.	-	0	ID=cds-WP_001176745.1;Parent=gene-AC56_RS03460;Dbxref=GenBank:WP_001176745.1;Name=WP_001176745.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=AC56_RS03460;product=F0F1 ATP synthase subunit alpha;protein_id=WP_001176745.1;transl_table=11
NZ_JJLS01000279.1	RefSeq	gene	21753	22286	.	-	.	ID=gene-AC56_RS03455;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=AC56_RS03455;old_locus_tag=AC56_4170
NZ_JJLS01000279.1	Protein Homology	CDS	21753	22286	.	-	0	ID=cds-WP_001288587.1;Parent=gene-AC56_RS03455;Dbxref=GenBank:WP_001288587.1;Name=WP_001288587.1;Ontology_term=GO:0015986,GO:0046933,GO:0016020;gbkey=CDS;gene=atpH;go_component=membrane|0016020||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1;locus_tag=AC56_RS03455;product=F0F1 ATP synthase subunit delta;protein_id=WP_001288587.1;transl_table=11
NZ_JJLS01000279.1	RefSeq	gene	22301	22771	.	-	.	ID=gene-AC56_RS03450;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=AC56_RS03450;old_locus_tag=AC56_4171
NZ_JJLS01000279.1	Protein Homology	CDS	22301	22771	.	-	0	ID=cds-WP_001052219.1;Parent=gene-AC56_RS03450;Dbxref=GenBank:WP_001052219.1;Name=WP_001052219.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpF;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=AC56_RS03450;product=F0F1 ATP synthase subunit B;protein_id=WP_001052219.1;transl_table=11
NZ_JJLS01000279.1	RefSeq	gene	22833	23072	.	-	.	ID=gene-AC56_RS03445;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=AC56_RS03445;old_locus_tag=AC56_4172
NZ_JJLS01000279.1	Protein Homology	CDS	22833	23072	.	-	0	ID=cds-WP_000429386.1;Parent=gene-AC56_RS03445;Dbxref=GenBank:WP_000429386.1;Name=WP_000429386.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246596.1;locus_tag=AC56_RS03445;product=F0F1 ATP synthase subunit C;protein_id=WP_000429386.1;transl_table=11
NZ_JJLS01000279.1	RefSeq	gene	23119	23934	.	-	.	ID=gene-AC56_RS03440;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=AC56_RS03440;old_locus_tag=AC56_4173
NZ_JJLS01000279.1	Protein Homology	CDS	23119	23934	.	-	0	ID=cds-WP_032279191.1;Parent=gene-AC56_RS03440;Dbxref=GenBank:WP_032279191.1;Name=WP_032279191.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121454.1;locus_tag=AC56_RS03440;product=F0F1 ATP synthase subunit A;protein_id=WP_032279191.1;transl_table=11
NZ_JJLS01000279.1	RefSeq	gene	23943	24323	.	-	.	ID=gene-AC56_RS0127295;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=AC56_RS0127295
NZ_JJLS01000279.1	Protein Homology	CDS	23943	24323	.	-	0	ID=cds-WP_000116695.1;Parent=gene-AC56_RS0127295;Dbxref=GenBank:WP_000116695.1;Name=WP_000116695.1;gbkey=CDS;gene=atpI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418195.2;locus_tag=AC56_RS0127295;product=F0F1 ATP synthase subunit I;protein_id=WP_000116695.1;transl_table=11
NZ_JJLS01000279.1	RefSeq	gene	24940	25563	.	-	.	ID=gene-AC56_RS03435;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=AC56_RS03435;old_locus_tag=AC56_4175
NZ_JJLS01000279.1	Protein Homology	CDS	24940	25563	.	-	0	ID=cds-WP_000932839.1;Parent=gene-AC56_RS03435;Dbxref=GenBank:WP_000932839.1;Name=WP_000932839.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312709.1;locus_tag=AC56_RS03435;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_000932839.1;transl_table=11
NZ_JJLS01000279.1	RefSeq	gene	25627	27516	.	-	.	ID=gene-AC56_RS03430;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=AC56_RS03430;old_locus_tag=AC56_4176
NZ_JJLS01000279.1	Protein Homology	CDS	25627	27516	.	-	0	ID=cds-WP_032279192.1;Parent=gene-AC56_RS03430;Dbxref=GenBank:WP_032279192.1;Name=WP_032279192.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499793.1;locus_tag=AC56_RS03430;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_032279192.1;transl_table=11
NZ_JJLS01000279.1	RefSeq	gene	27895	28338	.	-	.	ID=gene-AC56_RS03425;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=AC56_RS03425;old_locus_tag=AC56_4177
NZ_JJLS01000279.1	Protein Homology	CDS	27895	28338	.	-	0	ID=cds-WP_000763731.1;Parent=gene-AC56_RS03425;Dbxref=GenBank:WP_000763731.1;Name=WP_000763731.1;Ontology_term=GO:0010181;gbkey=CDS;gene=mioC;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312711.1;locus_tag=AC56_RS03425;product=FMN-binding protein MioC;protein_id=WP_000763731.1;transl_table=11
NZ_JJLS01000279.1	RefSeq	gene	28428	28886	.	-	.	ID=gene-AC56_RS03420;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=AC56_RS03420;old_locus_tag=AC56_4178
NZ_JJLS01000279.1	Protein Homology	CDS	28428	28886	.	-	0	ID=cds-WP_000432970.1;Parent=gene-AC56_RS03420;Dbxref=GenBank:WP_000432970.1;Name=WP_000432970.1;Ontology_term=GO:0043565;gbkey=CDS;gene=asnC;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312712.1;locus_tag=AC56_RS03420;product=transcriptional regulator AsnC;protein_id=WP_000432970.1;transl_table=11
NZ_JJLS01000279.1	RefSeq	gene	29038	30030	.	+	.	ID=gene-AC56_RS03415;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=AC56_RS03415;old_locus_tag=AC56_4179
NZ_JJLS01000279.1	Protein Homology	CDS	29038	30030	.	+	0	ID=cds-WP_000845104.1;Parent=gene-AC56_RS03415;Dbxref=GenBank:WP_000845104.1;Name=WP_000845104.1;Ontology_term=GO:0006529,GO:0004071,GO:0005737;gbkey=CDS;gene=asnA;go_component=cytoplasm|0005737||IEA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418200.1;locus_tag=AC56_RS03415;product=aspartate--ammonia ligase;protein_id=WP_000845104.1;transl_table=11
NZ_JJLS01000279.1	RefSeq	gene	30035	31486	.	-	.	ID=gene-AC56_RS03410;Name=viaA;gbkey=Gene;gene=viaA;gene_biotype=protein_coding;locus_tag=AC56_RS03410;old_locus_tag=AC56_4180
NZ_JJLS01000279.1	Protein Homology	CDS	30035	31486	.	-	0	ID=cds-WP_000956609.1;Parent=gene-AC56_RS03410;Dbxref=GenBank:WP_000956609.1;Name=WP_000956609.1;gbkey=CDS;gene=viaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312714.1;locus_tag=AC56_RS03410;product=ATPase RavA stimulator ViaA;protein_id=WP_000956609.1;transl_table=11
NZ_JJLS01000279.1	RefSeq	gene	31480	32976	.	-	.	ID=gene-AC56_RS03405;Name=ravA;gbkey=Gene;gene=ravA;gene_biotype=protein_coding;locus_tag=AC56_RS03405;old_locus_tag=AC56_4181
NZ_JJLS01000279.1	Protein Homology	CDS	31480	32976	.	-	0	ID=cds-WP_032279193.1;Parent=gene-AC56_RS03405;Dbxref=GenBank:WP_032279193.1;Name=WP_032279193.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ravA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418202.4;locus_tag=AC56_RS03405;product=ATPase RavA;protein_id=WP_032279193.1;transl_table=11
NZ_JJLS01000279.1	RefSeq	gene	33199	35067	.	+	.	ID=gene-AC56_RS03400;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;locus_tag=AC56_RS03400;old_locus_tag=AC56_4182
NZ_JJLS01000279.1	Protein Homology	CDS	33199	35067	.	+	0	ID=cds-WP_000102319.1;Parent=gene-AC56_RS03400;Dbxref=GenBank:WP_000102319.1;Name=WP_000102319.1;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;gene=kup;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102304.1;locus_tag=AC56_RS03400;product=low affinity potassium transporter Kup;protein_id=WP_000102319.1;transl_table=11
NZ_JJLS01000279.1	RefSeq	gene	35234	35653	.	+	.	ID=gene-AC56_RS03395;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=AC56_RS03395;old_locus_tag=AC56_4183
NZ_JJLS01000279.1	Protein Homology	CDS	35234	35653	.	+	0	ID=cds-WP_000715936.1;Parent=gene-AC56_RS03395;Dbxref=GenBank:WP_000715936.1;Name=WP_000715936.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709562.2;locus_tag=AC56_RS03395;product=D-ribose pyranase;protein_id=WP_000715936.1;transl_table=11
NZ_JJLS01000279.1	RefSeq	gene	35661	37166	.	+	.	ID=gene-AC56_RS03390;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=protein_coding;locus_tag=AC56_RS03390;old_locus_tag=AC56_4184
NZ_JJLS01000279.1	Protein Homology	CDS	35661	37166	.	+	0	ID=cds-WP_032279194.1;Parent=gene-AC56_RS03390;Dbxref=GenBank:WP_032279194.1;Name=WP_032279194.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rbsA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418205.1;locus_tag=AC56_RS03390;product=ribose ABC transporter ATP-binding protein RbsA;protein_id=WP_032279194.1;transl_table=11
NZ_JJLS01000279.1	RefSeq	gene	37171	38136	.	+	.	ID=gene-AC56_RS03385;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=AC56_RS03385;old_locus_tag=AC56_4185
NZ_JJLS01000279.1	Protein Homology	CDS	37171	38136	.	+	0	ID=cds-WP_000211858.1;Parent=gene-AC56_RS03385;Dbxref=GenBank:WP_000211858.1;Name=WP_000211858.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=rbsC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002882531.1;locus_tag=AC56_RS03385;product=ribose ABC transporter permease;protein_id=WP_000211858.1;transl_table=11
NZ_JJLS01000279.1	RefSeq	gene	38161	39051	.	+	.	ID=gene-AC56_RS03380;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=protein_coding;locus_tag=AC56_RS03380;old_locus_tag=AC56_4186
NZ_JJLS01000279.1	Protein Homology	CDS	38161	39051	.	+	0	ID=cds-WP_001056273.1;Parent=gene-AC56_RS03380;Dbxref=GenBank:WP_001056273.1;Name=WP_001056273.1;gbkey=CDS;gene=rbsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312720.1;locus_tag=AC56_RS03380;product=ribose ABC transporter substrate-binding protein RbsB;protein_id=WP_001056273.1;transl_table=11
NZ_JJLS01000279.1	RefSeq	gene	39177	40106	.	+	.	ID=gene-AC56_RS03375;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=AC56_RS03375;old_locus_tag=AC56_4187
NZ_JJLS01000279.1	Protein Homology	CDS	39177	40106	.	+	0	ID=cds-WP_032279195.1;Parent=gene-AC56_RS03375;Dbxref=GenBank:WP_032279195.1;Name=WP_032279195.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312721.1;locus_tag=AC56_RS03375;product=ribokinase;protein_id=WP_032279195.1;transl_table=11
NZ_JJLS01000279.1	RefSeq	pseudogene	40110	41102	.	+	.	ID=gene-AC56_RS0127300;Name=rbsR;gbkey=Gene;gene=rbsR;gene_biotype=pseudogene;locus_tag=AC56_RS0127300;pseudo=true
NZ_JJLS01000279.1	Protein Homology	CDS	40110	41102	.	+	0	ID=cds-AC56_RS0127300;Parent=gene-AC56_RS0127300;Note=internal stop;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rbsR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312722.1;locus_tag=AC56_RS0127300;product=ribose operon transcriptional repressor RbsR;pseudo=true;transl_table=11
NZ_JJLS01000279.1	RefSeq	gene	41068	42495	.	-	.	ID=gene-AC56_RS03370;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=AC56_RS03370;old_locus_tag=AC56_4190
NZ_JJLS01000279.1	Protein Homology	CDS	41068	42495	.	-	0	ID=cds-WP_001280843.1;Parent=gene-AC56_RS03370;Dbxref=GenBank:WP_001280843.1;Name=WP_001280843.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418210.1;locus_tag=AC56_RS03370;product=multidrug transporter subunit MdtD;protein_id=WP_001280843.1;transl_table=11
NZ_JJLS01000279.1	RefSeq	gene	42518	43210	.	-	.	ID=gene-AC56_RS03365;Name=yieP;gbkey=Gene;gene=yieP;gene_biotype=protein_coding;locus_tag=AC56_RS03365;old_locus_tag=AC56_4191
NZ_JJLS01000279.1	Protein Homology	CDS	42518	43210	.	-	0	ID=cds-WP_001131164.1;Parent=gene-AC56_RS03365;Dbxref=GenBank:WP_001131164.1;Name=WP_001131164.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=yieP;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312724.2;locus_tag=AC56_RS03365;product=FadR/GntR family transcriptional regulator;protein_id=WP_001131164.1;transl_table=11
NZ_JJLS01000279.1	RefSeq	gene	43691	45179	.	+	.	ID=gene-AC56_RS03360;Name=AC56_RS03360;end_range=45179,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC56_RS03360;old_locus_tag=AC56_4192;partial=true
NZ_JJLS01000279.1	cmsearch	rRNA	43691	45179	.	+	.	ID=rna-AC56_RS03360;Parent=gene-AC56_RS03360;Dbxref=RFAM:RF00177;end_range=45179,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS03360;partial=true;product=16S ribosomal RNA
NZ_JJLS01000279.1	cmsearch	exon	43691	45179	.	+	.	ID=exon-AC56_RS03360-1;Parent=rna-AC56_RS03360;Dbxref=RFAM:RF00177;end_range=45179,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS03360;partial=true;product=16S ribosomal RNA
##sequence-region NZ_JJLS01000280.1 1 15746
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000280.1	RefSeq	region	1	15746	.	+	.	ID=NZ_JJLS01000280.1:1..15746;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000280.1	RefSeq	gene	1	2893	.	+	.	ID=gene-AC56_RS03355;Name=AC56_RS03355;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC56_RS03355;old_locus_tag=AC56_4193;partial=true;start_range=.,1
NZ_JJLS01000280.1	cmsearch	rRNA	1	2893	.	+	.	ID=rna-AC56_RS03355;Parent=gene-AC56_RS03355;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS03355;partial=true;product=23S ribosomal RNA;start_range=.,1
NZ_JJLS01000280.1	cmsearch	exon	1	2893	.	+	.	ID=exon-AC56_RS03355-1;Parent=rna-AC56_RS03355;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS03355;partial=true;product=23S ribosomal RNA;start_range=.,1
NZ_JJLS01000280.1	RefSeq	gene	2989	3104	.	+	.	ID=gene-AC56_RS03350;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AC56_RS03350;old_locus_tag=AC56_4196
NZ_JJLS01000280.1	cmsearch	rRNA	2989	3104	.	+	.	ID=rna-AC56_RS03350;Parent=gene-AC56_RS03350;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS03350;product=5S ribosomal RNA
NZ_JJLS01000280.1	cmsearch	exon	2989	3104	.	+	.	ID=exon-AC56_RS03350-1;Parent=rna-AC56_RS03350;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS03350;product=5S ribosomal RNA
NZ_JJLS01000280.1	RefSeq	gene	3159	3235	.	+	.	ID=gene-AC56_RS03345;Name=AC56_RS03345;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS03345;old_locus_tag=AC56_4197
NZ_JJLS01000280.1	tRNAscan-SE	tRNA	3159	3235	.	+	.	ID=rna-AC56_RS03345;Parent=gene-AC56_RS03345;anticodon=(pos:3193..3195);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS03345;product=tRNA-Asp
NZ_JJLS01000280.1	tRNAscan-SE	exon	3159	3235	.	+	.	ID=exon-AC56_RS03345-1;Parent=rna-AC56_RS03345;anticodon=(pos:3193..3195);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS03345;product=tRNA-Asp
NZ_JJLS01000280.1	RefSeq	gene	3244	3319	.	+	.	ID=gene-AC56_RS03340;Name=AC56_RS03340;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS03340;old_locus_tag=AC56_4198
NZ_JJLS01000280.1	tRNAscan-SE	tRNA	3244	3319	.	+	.	ID=rna-AC56_RS03340;Parent=gene-AC56_RS03340;anticodon=(pos:3277..3279);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS03340;product=tRNA-Trp
NZ_JJLS01000280.1	tRNAscan-SE	exon	3244	3319	.	+	.	ID=exon-AC56_RS03340-1;Parent=rna-AC56_RS03340;anticodon=(pos:3277..3279);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS03340;product=tRNA-Trp
NZ_JJLS01000280.1	RefSeq	gene	3415	4254	.	-	.	ID=gene-AC56_RS03335;Name=hdfR;gbkey=Gene;gene=hdfR;gene_biotype=protein_coding;locus_tag=AC56_RS03335;old_locus_tag=AC56_4199
NZ_JJLS01000280.1	Protein Homology	CDS	3415	4254	.	-	0	ID=cds-WP_000379245.1;Parent=gene-AC56_RS03335;Dbxref=GenBank:WP_000379245.1;Name=WP_000379245.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hdfR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709570.1;locus_tag=AC56_RS03335;product=HTH-type transcriptional regulator HdfR;protein_id=WP_000379245.1;transl_table=11
NZ_JJLS01000280.1	RefSeq	gene	4373	4711	.	+	.	ID=gene-AC56_RS03330;Name=maoP;gbkey=Gene;gene=maoP;gene_biotype=protein_coding;locus_tag=AC56_RS03330;old_locus_tag=AC56_4200
NZ_JJLS01000280.1	Protein Homology	CDS	4373	4711	.	+	0	ID=cds-WP_000841001.1;Parent=gene-AC56_RS03330;Dbxref=GenBank:WP_000841001.1;Name=WP_000841001.1;gbkey=CDS;gene=maoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312726.1;locus_tag=AC56_RS03330;product=macrodomain Ori organization protein MaoP;protein_id=WP_000841001.1;transl_table=11
NZ_JJLS01000280.1	RefSeq	pseudogene	4736	6256	.	-	.	ID=gene-AC56_RS0127305;Name=yifB;gbkey=Gene;gene=yifB;gene_biotype=pseudogene;locus_tag=AC56_RS0127305;pseudo=true
NZ_JJLS01000280.1	Protein Homology	CDS	4736	6256	.	-	0	ID=cds-AC56_RS0127305;Parent=gene-AC56_RS0127305;Note=internal stop;Ontology_term=GO:0005524;gbkey=CDS;gene=yifB;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418214.2;locus_tag=AC56_RS0127305;product=YifB family Mg chelatase-like AAA ATPase;pseudo=true;transl_table=11
NZ_JJLS01000280.1	RefSeq	gene	6609	6707	.	+	.	ID=gene-AC56_RS0127310;Name=ilvL;gbkey=Gene;gene=ilvL;gene_biotype=protein_coding;locus_tag=AC56_RS0127310
NZ_JJLS01000280.1	Protein Homology	CDS	6609	6707	.	+	0	ID=cds-WP_001311244.1;Parent=gene-AC56_RS0127310;Dbxref=GenBank:WP_001311244.1;Name=WP_001311244.1;Ontology_term=GO:0031556;gbkey=CDS;gene=ilvL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312728.1;locus_tag=AC56_RS0127310;product=ilv operon leader peptide;protein_id=WP_001311244.1;transl_table=11
NZ_JJLS01000280.1	RefSeq	gene	6794	6844	.	+	.	ID=gene-AC56_RS32430;Name=ilvX;gbkey=Gene;gene=ilvX;gene_biotype=protein_coding;locus_tag=AC56_RS32430
NZ_JJLS01000280.1	Protein Homology	CDS	6794	6844	.	+	0	ID=cds-WP_001387183.1;Parent=gene-AC56_RS32430;Dbxref=GenBank:WP_001387183.1;Name=WP_001387183.1;gbkey=CDS;gene=ilvX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791259.1;locus_tag=AC56_RS32430;product=peptide IlvX;protein_id=WP_001387183.1;transl_table=11
NZ_JJLS01000280.1	RefSeq	gene	6847	8493	.	+	.	ID=gene-AC56_RS03325;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=AC56_RS03325;old_locus_tag=AC56_4203
NZ_JJLS01000280.1	Protein Homology	CDS	6847	8493	.	+	0	ID=cds-WP_001012620.1;Parent=gene-AC56_RS03325;Dbxref=GenBank:WP_001012620.1;Name=WP_001012620.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001012636.1;locus_tag=AC56_RS03325;product=acetolactate synthase 2 catalytic subunit;protein_id=WP_001012620.1;transl_table=11
NZ_JJLS01000280.1	RefSeq	gene	8490	8753	.	+	.	ID=gene-AC56_RS03320;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=AC56_RS03320;old_locus_tag=AC56_4204
NZ_JJLS01000280.1	Protein Homology	CDS	8490	8753	.	+	0	ID=cds-WP_000983255.1;Parent=gene-AC56_RS03320;Dbxref=GenBank:WP_000983255.1;Name=WP_000983255.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312730.1;locus_tag=AC56_RS03320;product=acetolactate synthase 2 small subunit;protein_id=WP_000983255.1;transl_table=11
NZ_JJLS01000280.1	RefSeq	gene	8773	9702	.	+	.	ID=gene-AC56_RS03315;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=AC56_RS03315;old_locus_tag=AC56_4205
NZ_JJLS01000280.1	Protein Homology	CDS	8773	9702	.	+	0	ID=cds-WP_000208520.1;Parent=gene-AC56_RS03315;Dbxref=GenBank:WP_000208520.1;Name=WP_000208520.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;gene=ilvE;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312731.1;locus_tag=AC56_RS03315;product=branched-chain-amino-acid transaminase;protein_id=WP_000208520.1;transl_table=11
NZ_JJLS01000280.1	RefSeq	gene	9767	11617	.	+	.	ID=gene-AC56_RS03310;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=AC56_RS03310;old_locus_tag=AC56_4206
NZ_JJLS01000280.1	Protein Homology	CDS	9767	11617	.	+	0	ID=cds-WP_001127419.1;Parent=gene-AC56_RS03310;Dbxref=GenBank:WP_001127419.1;Name=WP_001127419.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=AC56_RS03310;product=dihydroxy-acid dehydratase;protein_id=WP_001127419.1;transl_table=11
NZ_JJLS01000280.1	RefSeq	gene	11620	13164	.	+	.	ID=gene-AC56_RS03305;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=AC56_RS03305;old_locus_tag=AC56_4207
NZ_JJLS01000280.1	Protein Homology	CDS	11620	13164	.	+	0	ID=cds-WP_001338652.1;Parent=gene-AC56_RS03305;Dbxref=GenBank:WP_001338652.1;Name=WP_001338652.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418220.1;locus_tag=AC56_RS03305;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_001338652.1;transl_table=11
NZ_JJLS01000280.1	RefSeq	gene	13216	14109	.	-	.	ID=gene-AC56_RS03300;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=AC56_RS03300;old_locus_tag=AC56_4208
NZ_JJLS01000280.1	Protein Homology	CDS	13216	14109	.	-	0	ID=cds-WP_000365791.1;Parent=gene-AC56_RS03300;Dbxref=GenBank:WP_000365791.1;Name=WP_000365791.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ilvY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418221.1;locus_tag=AC56_RS03300;product=HTH-type transcriptional activator IlvY;protein_id=WP_000365791.1;transl_table=11
NZ_JJLS01000280.1	RefSeq	gene	14259	15734	.	+	.	ID=gene-AC56_RS03295;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=AC56_RS03295;old_locus_tag=AC56_4209
NZ_JJLS01000280.1	Protein Homology	CDS	14259	15734	.	+	0	ID=cds-WP_000024939.1-3;Parent=gene-AC56_RS03295;Dbxref=GenBank:WP_000024939.1;Name=WP_000024939.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=AC56_RS03295;product=ketol-acid reductoisomerase;protein_id=WP_000024939.1;transl_table=11
##sequence-region NZ_JJLS01000281.1 1 8492
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000281.1	RefSeq	region	1	8492	.	+	.	ID=NZ_JJLS01000281.1:1..8492;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000281.1	RefSeq	pseudogene	1	532	.	-	.	ID=gene-AC56_RS31670;Name=AC56_RS31670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS31670;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000281.1	Protein Homology	CDS	1	532	.	-	0	ID=cds-AC56_RS31670;Parent=gene-AC56_RS31670;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=AC56_RS31670;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000281.1	RefSeq	pseudogene	584	819	.	-	.	ID=gene-AC56_RS03285;Name=AC56_RS03285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS03285;old_locus_tag=AC56_4211;partial=true;pseudo=true;start_range=.,584
NZ_JJLS01000281.1	Protein Homology	CDS	584	819	.	-	0	ID=cds-AC56_RS03285;Parent=gene-AC56_RS03285;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312737.1;locus_tag=AC56_RS03285;partial=true;product=type II toxin-antitoxin system PemK/MazF family toxin;pseudo=true;start_range=.,584;transl_table=11
NZ_JJLS01000281.1	RefSeq	gene	1036	3057	.	+	.	ID=gene-AC56_RS03280;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=AC56_RS03280;old_locus_tag=AC56_4212
NZ_JJLS01000281.1	Protein Homology	CDS	1036	3057	.	+	0	ID=cds-WP_032279196.1;Parent=gene-AC56_RS03280;Dbxref=GenBank:WP_032279196.1;Name=WP_032279196.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;gene=rep;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026251.1;locus_tag=AC56_RS03280;product=DNA helicase Rep;protein_id=WP_032279196.1;transl_table=11
NZ_JJLS01000281.1	RefSeq	gene	3104	4588	.	-	.	ID=gene-AC56_RS03275;Name=gppA;gbkey=Gene;gene=gppA;gene_biotype=protein_coding;locus_tag=AC56_RS03275;old_locus_tag=AC56_4213
NZ_JJLS01000281.1	Protein Homology	CDS	3104	4588	.	-	0	ID=cds-WP_032279198.1;Parent=gene-AC56_RS03275;Dbxref=GenBank:WP_032279198.1;Name=WP_032279198.1;Ontology_term=GO:0015974,GO:0008894;gbkey=CDS;gene=gppA;go_function=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase activity|0008894||IEA;go_process=guanosine pentaphosphate catabolic process|0015974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312739.1;locus_tag=AC56_RS03275;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;protein_id=WP_032279198.1;transl_table=11
NZ_JJLS01000281.1	RefSeq	gene	4724	5989	.	-	.	ID=gene-AC56_RS03270;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=AC56_RS03270;old_locus_tag=AC56_4214
NZ_JJLS01000281.1	Protein Homology	CDS	4724	5989	.	-	0	ID=cds-WP_000047499.1;Parent=gene-AC56_RS03270;Dbxref=GenBank:WP_000047499.1;Name=WP_000047499.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=rhlB;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418227.1;locus_tag=AC56_RS03270;product=ATP-dependent RNA helicase RhlB;protein_id=WP_000047499.1;transl_table=11
NZ_JJLS01000281.1	RefSeq	gene	6120	6449	.	+	.	ID=gene-AC56_RS03265;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=AC56_RS03265;old_locus_tag=AC56_4215
NZ_JJLS01000281.1	Protein Homology	CDS	6120	6449	.	+	0	ID=cds-WP_001280776.1;Parent=gene-AC56_RS03265;Dbxref=GenBank:WP_001280776.1;Name=WP_001280776.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017375425.1;locus_tag=AC56_RS03265;product=thioredoxin TrxA;protein_id=WP_001280776.1;transl_table=11
NZ_JJLS01000281.1	RefSeq	gene	6590	6691	.	+	.	ID=gene-AC56_RS0127315;Name=rhoL;gbkey=Gene;gene=rhoL;gene_biotype=protein_coding;locus_tag=AC56_RS0127315
NZ_JJLS01000281.1	Protein Homology	CDS	6590	6691	.	+	0	ID=cds-WP_001295255.1;Parent=gene-AC56_RS0127315;Dbxref=GenBank:WP_001295255.1;Name=WP_001295255.1;gbkey=CDS;gene=rhoL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312742.1;locus_tag=AC56_RS0127315;product=rho operon leader peptide RhoL;protein_id=WP_001295255.1;transl_table=11
NZ_JJLS01000281.1	RefSeq	gene	6776	8035	.	+	.	ID=gene-AC56_RS03260;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=AC56_RS03260;old_locus_tag=AC56_4216
NZ_JJLS01000281.1	Protein Homology	CDS	6776	8035	.	+	0	ID=cds-WP_001054527.1;Parent=gene-AC56_RS03260;Dbxref=GenBank:WP_001054527.1;Name=WP_001054527.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1;locus_tag=AC56_RS03260;product=transcription termination factor Rho;protein_id=WP_001054527.1;transl_table=11
NZ_JJLS01000281.1	RefSeq	gene	8145	8492	.	-	.	ID=gene-AC56_RS0127320;Name=AC56_RS0127320;end_range=8492,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0127320;partial=true
NZ_JJLS01000281.1	Protein Homology	CDS	8145	8492	.	-	0	ID=cds-WP_032175380.1;Parent=gene-AC56_RS0127320;Dbxref=GenBank:WP_032175380.1;Name=WP_032175380.1;end_range=8492,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS0127320;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032175380.1;transl_table=11
##sequence-region NZ_JJLS01000282.1 1 22525
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000282.1	RefSeq	region	1	22525	.	+	.	ID=NZ_JJLS01000282.1:1..22525;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000282.1	RefSeq	gene	1	411	.	-	.	ID=gene-AC56_RS03255;Name=AC56_RS03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS03255;old_locus_tag=AC56_4218;partial=true;start_range=.,1
NZ_JJLS01000282.1	Protein Homology	CDS	1	411	.	-	0	ID=cds-WP_032277831.1;Parent=gene-AC56_RS03255;Dbxref=GenBank:WP_032277831.1;Name=WP_032277831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS03255;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032277831.1;start_range=.,1;transl_table=11
NZ_JJLS01000282.1	RefSeq	gene	391	627	.	+	.	ID=gene-AC56_RS33010;Name=AC56_RS33010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33010;old_locus_tag=AC56_4219
NZ_JJLS01000282.1	GeneMarkS-2+	CDS	391	627	.	+	0	ID=cds-WP_032279200.1;Parent=gene-AC56_RS33010;Dbxref=GenBank:WP_032279200.1;Name=WP_032279200.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS33010;product=hypothetical protein;protein_id=WP_032279200.1;transl_table=11
NZ_JJLS01000282.1	RefSeq	gene	639	1742	.	+	.	ID=gene-AC56_RS03245;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=AC56_RS03245;old_locus_tag=AC56_4220
NZ_JJLS01000282.1	Protein Homology	CDS	639	1742	.	+	0	ID=cds-WP_001050960.1;Parent=gene-AC56_RS03245;Dbxref=GenBank:WP_001050960.1;Name=WP_001050960.1;Ontology_term=GO:0009103,GO:0009246,GO:0000287,GO:0016780,GO:0030145,GO:0036380,GO:0009276,GO:0016020;gbkey=CDS;gene=wecA;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,manganese ion binding|0030145||IEA,UDP-N-acetylglucosamine-undecaprenyl-phosphate N-acetylglucosaminephosphotransferase activity|0036380||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418231.1;locus_tag=AC56_RS03245;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WP_001050960.1;transl_table=11
NZ_JJLS01000282.1	RefSeq	gene	1754	2800	.	+	.	ID=gene-AC56_RS03240;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;locus_tag=AC56_RS03240;old_locus_tag=AC56_4221
NZ_JJLS01000282.1	Protein Homology	CDS	1754	2800	.	+	0	ID=cds-WP_032279201.1;Parent=gene-AC56_RS03240;Dbxref=GenBank:WP_032279201.1;Name=WP_032279201.1;Ontology_term=GO:0009103,GO:0009246,GO:0016020;gbkey=CDS;gene=wzzE;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709589.2;locus_tag=AC56_RS03240;product=ECA polysaccharide chain length modulation protein;protein_id=WP_032279201.1;transl_table=11
NZ_JJLS01000282.1	RefSeq	gene	2856	3986	.	+	.	ID=gene-AC56_RS03235;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=AC56_RS03235;old_locus_tag=AC56_4222
NZ_JJLS01000282.1	Protein Homology	CDS	2856	3986	.	+	0	ID=cds-WP_032279202.1;Parent=gene-AC56_RS03235;Dbxref=GenBank:WP_032279202.1;Name=WP_032279202.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026253.1;locus_tag=AC56_RS03235;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_032279202.1;transl_table=11
NZ_JJLS01000282.1	RefSeq	gene	3983	5245	.	+	.	ID=gene-AC56_RS03230;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=AC56_RS03230;old_locus_tag=AC56_4223
NZ_JJLS01000282.1	Protein Homology	CDS	3983	5245	.	+	0	ID=cds-WP_032279205.1;Parent=gene-AC56_RS03230;Dbxref=GenBank:WP_032279205.1;Name=WP_032279205.1;Ontology_term=GO:0009246,GO:0051287,GO:0089714;gbkey=CDS;gene=wecC;go_function=NAD binding|0051287||IEA,UDP-N-acetyl-D-mannosamine dehydrogenase activity|0089714||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312747.1;locus_tag=AC56_RS03230;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_032279205.1;transl_table=11
NZ_JJLS01000282.1	RefSeq	gene	5245	6312	.	+	.	ID=gene-AC56_RS03225;Name=rffG;gbkey=Gene;gene=rffG;gene_biotype=protein_coding;locus_tag=AC56_RS03225;old_locus_tag=AC56_4224
NZ_JJLS01000282.1	Protein Homology	CDS	5245	6312	.	+	0	ID=cds-WP_001226588.1;Parent=gene-AC56_RS03225;Dbxref=GenBank:WP_001226588.1;Name=WP_001226588.1;Ontology_term=GO:0009225,GO:0008460;gbkey=CDS;gene=rffG;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312748.1;locus_tag=AC56_RS03225;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_001226588.1;transl_table=11
NZ_JJLS01000282.1	RefSeq	gene	6331	7212	.	+	.	ID=gene-AC56_RS03220;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=AC56_RS03220;old_locus_tag=AC56_4225
NZ_JJLS01000282.1	Protein Homology	CDS	6331	7212	.	+	0	ID=cds-WP_032279206.1;Parent=gene-AC56_RS03220;Dbxref=GenBank:WP_032279206.1;Name=WP_032279206.1;Ontology_term=GO:0000271,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133346.1;locus_tag=AC56_RS03220;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_032279206.1;transl_table=11
NZ_JJLS01000282.1	RefSeq	gene	7190	7864	.	+	.	ID=gene-AC56_RS03215;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=protein_coding;gene_synonym=wecD;locus_tag=AC56_RS03215;old_locus_tag=AC56_4226
NZ_JJLS01000282.1	Protein Homology	CDS	7190	7864	.	+	0	ID=cds-WP_001145183.1;Parent=gene-AC56_RS03215;Dbxref=GenBank:WP_001145183.1;Name=WP_001145183.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rffC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026256.2;locus_tag=AC56_RS03215;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=WP_001145183.1;transl_table=11
NZ_JJLS01000282.1	RefSeq	gene	7869	8999	.	+	.	ID=gene-AC56_RS03210;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=AC56_RS03210;old_locus_tag=AC56_4227
NZ_JJLS01000282.1	Protein Homology	CDS	7869	8999	.	+	0	ID=cds-WP_000612043.1;Parent=gene-AC56_RS03210;Dbxref=GenBank:WP_000612043.1;Name=WP_000612043.1;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418238.1;locus_tag=AC56_RS03210;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=WP_000612043.1;transl_table=11
NZ_JJLS01000282.1	RefSeq	gene	9001	10251	.	+	.	ID=gene-AC56_RS03205;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;locus_tag=AC56_RS03205;old_locus_tag=AC56_4228
NZ_JJLS01000282.1	Protein Homology	CDS	9001	10251	.	+	0	ID=cds-WP_000050265.1;Parent=gene-AC56_RS03205;Dbxref=GenBank:WP_000050265.1;Name=WP_000050265.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzxE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418239.1;locus_tag=AC56_RS03205;product=lipid III flippase WzxE;protein_id=WP_000050265.1;transl_table=11
NZ_JJLS01000282.1	RefSeq	gene	10248	11327	.	+	.	ID=gene-AC56_RS03200;Name=rffT;gbkey=Gene;gene=rffT;gene_biotype=protein_coding;gene_synonym=wecF;locus_tag=AC56_RS03200;old_locus_tag=AC56_4229
NZ_JJLS01000282.1	Protein Homology	CDS	10248	11327	.	+	0	ID=cds-WP_032279207.1;Parent=gene-AC56_RS03200;Dbxref=GenBank:WP_032279207.1;Name=WP_032279207.1;gbkey=CDS;gene=rffT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709597.1;locus_tag=AC56_RS03200;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=WP_032279207.1;transl_table=11
NZ_JJLS01000282.1	RefSeq	gene	11324	12676	.	+	.	ID=gene-AC56_RS03195;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;locus_tag=AC56_RS03195;old_locus_tag=AC56_4230
NZ_JJLS01000282.1	Protein Homology	CDS	11324	12676	.	+	0	ID=cds-WP_000055132.1;Parent=gene-AC56_RS03195;Dbxref=GenBank:WP_000055132.1;Name=WP_000055132.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzyE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312754.1;locus_tag=AC56_RS03195;product=ECA oligosaccharide polymerase;protein_id=WP_000055132.1;transl_table=11
NZ_JJLS01000282.1	RefSeq	gene	12679	13419	.	+	.	ID=gene-AC56_RS03190;Name=wecG;gbkey=Gene;gene=wecG;gene_biotype=protein_coding;locus_tag=AC56_RS03190;old_locus_tag=AC56_4231
NZ_JJLS01000282.1	Protein Homology	CDS	12679	13419	.	+	0	ID=cds-WP_001064025.1;Parent=gene-AC56_RS03190;Dbxref=GenBank:WP_001064025.1;Name=WP_001064025.1;Ontology_term=GO:0047241;gbkey=CDS;gene=wecG;go_function=lipopolysaccharide N-acetylmannosaminouronosyltransferase activity|0047241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418242.1;locus_tag=AC56_RS03190;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=WP_001064025.1;transl_table=11
NZ_JJLS01000282.1	RefSeq	gene	13610	14995	.	+	.	ID=gene-AC56_RS03185;Name=thrP;gbkey=Gene;gene=thrP;gene_biotype=protein_coding;gene_synonym=yifK;locus_tag=AC56_RS03185;old_locus_tag=AC56_4232
NZ_JJLS01000282.1	Protein Homology	CDS	13610	14995	.	+	0	ID=cds-WP_000774731.1;Parent=gene-AC56_RS03185;Dbxref=GenBank:WP_000774731.1;Name=WP_000774731.1;Ontology_term=GO:0015194,GO:0015195;gbkey=CDS;gene=thrP;go_function=L-serine transmembrane transporter activity|0015194||IEA,L-threonine transmembrane transporter activity|0015195||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312756.1;locus_tag=AC56_RS03185;product=bifunctional threonine/serine APC transporter ThrP;protein_id=WP_000774731.1;transl_table=11
NZ_JJLS01000282.1	RefSeq	gene	15098	15174	.	+	.	ID=gene-AC56_RS03180;Name=AC56_RS03180;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS03180;old_locus_tag=AC56_4233
NZ_JJLS01000282.1	tRNAscan-SE	tRNA	15098	15174	.	+	.	ID=rna-AC56_RS03180;Parent=gene-AC56_RS03180;anticodon=(pos:15132..15134);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS03180;product=tRNA-Arg
NZ_JJLS01000282.1	tRNAscan-SE	exon	15098	15174	.	+	.	ID=exon-AC56_RS03180-1;Parent=rna-AC56_RS03180;anticodon=(pos:15132..15134);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS03180;product=tRNA-Arg
NZ_JJLS01000282.1	RefSeq	gene	15233	15308	.	+	.	ID=gene-AC56_RS03175;Name=AC56_RS03175;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS03175;old_locus_tag=AC56_4234
NZ_JJLS01000282.1	tRNAscan-SE	tRNA	15233	15308	.	+	.	ID=rna-AC56_RS03175;Parent=gene-AC56_RS03175;anticodon=(pos:15266..15268);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS03175;product=tRNA-His
NZ_JJLS01000282.1	tRNAscan-SE	exon	15233	15308	.	+	.	ID=exon-AC56_RS03175-1;Parent=rna-AC56_RS03175;anticodon=(pos:15266..15268);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS03175;product=tRNA-His
NZ_JJLS01000282.1	RefSeq	gene	15329	15415	.	+	.	ID=gene-AC56_RS03170;Name=AC56_RS03170;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS03170;old_locus_tag=AC56_4235
NZ_JJLS01000282.1	tRNAscan-SE	tRNA	15329	15415	.	+	.	ID=rna-AC56_RS03170;Parent=gene-AC56_RS03170;anticodon=(pos:15363..15365);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS03170;product=tRNA-Leu
NZ_JJLS01000282.1	tRNAscan-SE	exon	15329	15415	.	+	.	ID=exon-AC56_RS03170-1;Parent=rna-AC56_RS03170;anticodon=(pos:15363..15365);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS03170;product=tRNA-Leu
NZ_JJLS01000282.1	RefSeq	gene	15458	15534	.	+	.	ID=gene-AC56_RS03165;Name=AC56_RS03165;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS03165;old_locus_tag=AC56_4236
NZ_JJLS01000282.1	tRNAscan-SE	tRNA	15458	15534	.	+	.	ID=rna-AC56_RS03165;Parent=gene-AC56_RS03165;anticodon=(pos:15492..15494);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS03165;product=tRNA-Pro
NZ_JJLS01000282.1	tRNAscan-SE	exon	15458	15534	.	+	.	ID=exon-AC56_RS03165-1;Parent=rna-AC56_RS03165;anticodon=(pos:15492..15494);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS03165;product=tRNA-Pro
NZ_JJLS01000282.1	RefSeq	gene	15681	16916	.	+	.	ID=gene-AC56_RS03160;Name=aslB;gbkey=Gene;gene=aslB;gene_biotype=protein_coding;locus_tag=AC56_RS03160;old_locus_tag=AC56_4237
NZ_JJLS01000282.1	Protein Homology	CDS	15681	16916	.	+	0	ID=cds-WP_000941509.1;Parent=gene-AC56_RS03160;Dbxref=GenBank:WP_000941509.1;Name=WP_000941509.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;gene=aslB;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026259.1;locus_tag=AC56_RS03160;product=anaerobic sulfatase maturase;protein_id=WP_000941509.1;transl_table=11
NZ_JJLS01000282.1	RefSeq	pseudogene	17024	17161	.	-	.	ID=gene-AC56_RS33015;Name=AC56_RS33015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33015;old_locus_tag=AC56_4238;partial=true;pseudo=true;start_range=.,17024
NZ_JJLS01000282.1	Protein Homology	CDS	17024	17161	.	-	0	ID=cds-AC56_RS33015;Parent=gene-AC56_RS33015;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418245.1;locus_tag=AC56_RS33015;partial=true;product=hypothetical protein;pseudo=true;start_range=.,17024;transl_table=11
NZ_JJLS01000282.1	RefSeq	gene	17463	18160	.	-	.	ID=gene-AC56_RS0127325;Name=AC56_RS0127325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0127325;old_locus_tag=AC56_4240
NZ_JJLS01000282.1	Protein Homology	CDS	17911	18160	.	-	0	ID=cds-WP_101780539.1-2;Parent=gene-AC56_RS0127325;Dbxref=GenBank:WP_101780539.1;Name=WP_101780539.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=AC56_RS0127325;product=IS1 family transposase;protein_id=WP_101780539.1;transl_table=11
NZ_JJLS01000282.1	Protein Homology	CDS	17463	17911	.	-	2	ID=cds-WP_101780539.1-2;Parent=gene-AC56_RS0127325;Dbxref=GenBank:WP_101780539.1;Name=WP_101780539.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=AC56_RS0127325;product=IS1 family transposase;protein_id=WP_101780539.1;transl_table=11
NZ_JJLS01000282.1	RefSeq	pseudogene	18216	18767	.	+	.	ID=gene-AC56_RS03150;Name=AC56_RS03150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS03150;old_locus_tag=AC56_4241;partial=true;pseudo=true;start_range=.,18216
NZ_JJLS01000282.1	Protein Homology	CDS	18216	18767	.	+	0	ID=cds-AC56_RS03150;Parent=gene-AC56_RS03150;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416205.1;locus_tag=AC56_RS03150;partial=true;product=MFS transporter;pseudo=true;start_range=.,18216;transl_table=11
NZ_JJLS01000282.1	RefSeq	gene	18994	20259	.	+	.	ID=gene-AC56_RS03145;Name=AC56_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS03145;old_locus_tag=AC56_4242
NZ_JJLS01000282.1	Protein Homology	CDS	18994	20259	.	+	0	ID=cds-WP_001297389.1-6;Parent=gene-AC56_RS03145;Dbxref=GenBank:WP_001297389.1;Name=WP_001297389.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310425.2;locus_tag=AC56_RS03145;product=MFS transporter;protein_id=WP_001297389.1;transl_table=11
NZ_JJLS01000282.1	RefSeq	gene	20271	21137	.	+	.	ID=gene-AC56_RS03140;Name=ydiB;gbkey=Gene;gene=ydiB;gene_biotype=protein_coding;locus_tag=AC56_RS03140;old_locus_tag=AC56_4243
NZ_JJLS01000282.1	Protein Homology	CDS	20271	21137	.	+	0	ID=cds-WP_032278339.1-6;Parent=gene-AC56_RS03140;Dbxref=GenBank:WP_032278339.1;Name=WP_032278339.1;gbkey=CDS;gene=ydiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416207.1;locus_tag=AC56_RS03140;product=quinate/shikimate dehydrogenase;protein_id=WP_032278339.1;transl_table=11
NZ_JJLS01000282.1	RefSeq	gene	21168	21926	.	+	.	ID=gene-AC56_RS03135;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=AC56_RS03135;old_locus_tag=AC56_4244
NZ_JJLS01000282.1	Protein Homology	CDS	21168	21926	.	+	0	ID=cds-WP_016242173.1-6;Parent=gene-AC56_RS03135;Dbxref=GenBank:WP_016242173.1;Name=WP_016242173.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416208.1;locus_tag=AC56_RS03135;product=type I 3-dehydroquinate dehydratase;protein_id=WP_016242173.1;transl_table=11
NZ_JJLS01000282.1	RefSeq	pseudogene	22069	22359	.	+	.	ID=gene-AC56_RS03130;Name=AC56_RS03130;end_range=22359,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS03130;old_locus_tag=AC56_4246;partial=true;pseudo=true
NZ_JJLS01000282.1	Protein Homology	CDS	22069	22359	.	+	0	ID=cds-AC56_RS03130;Parent=gene-AC56_RS03130;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0008410;end_range=22359,.;gbkey=CDS;go_function=CoA-transferase activity|0008410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310428.1;locus_tag=AC56_RS03130;partial=true;product=CoA-transferase;pseudo=true;transl_table=11
NZ_JJLS01000282.1	RefSeq	pseudogene	22391	22525	.	+	.	ID=gene-AC56_RS32860;Name=AC56_RS32860;end_range=22525,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS32860;old_locus_tag=AC56_4247;partial=true;pseudo=true
NZ_JJLS01000282.1	Protein Homology	CDS	22391	22525	.	+	0	ID=cds-AC56_RS32860;Parent=gene-AC56_RS32860;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=22525,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS32860;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000283.1 1 51431
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000283.1	RefSeq	region	1	51431	.	+	.	ID=NZ_JJLS01000283.1:1..51431;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000283.1	RefSeq	gene	1	692	.	-	.	ID=gene-AC56_RS03125;Name=AC56_RS03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS03125;old_locus_tag=AC56_4248;partial=true;start_range=.,1
NZ_JJLS01000283.1	Protein Homology	CDS	443	692	.	-	0	ID=cds-WP_248790154.1;Parent=gene-AC56_RS03125;Dbxref=GenBank:WP_248790154.1;Name=WP_248790154.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558270.1;locus_tag=AC56_RS03125;partial=true;product=IS1 family transposase;protein_id=WP_248790154.1;transl_table=11
NZ_JJLS01000283.1	Protein Homology	CDS	1	443	.	-	2	ID=cds-WP_248790154.1;Parent=gene-AC56_RS03125;Dbxref=GenBank:WP_248790154.1;Name=WP_248790154.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558270.1;locus_tag=AC56_RS03125;partial=true;product=IS1 family transposase;protein_id=WP_248790154.1;start_range=.,1;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	1149	2345	.	-	.	ID=gene-AC56_RS03120;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=AC56_RS03120;old_locus_tag=AC56_4249
NZ_JJLS01000283.1	Protein Homology	CDS	1149	2345	.	-	0	ID=cds-WP_000921789.1;Parent=gene-AC56_RS03120;Dbxref=GenBank:WP_000921789.1;Name=WP_000921789.1;Ontology_term=GO:0042168,GO:0005515,GO:0016020;gbkey=CDS;gene=hemY;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=heme metabolic process|0042168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312759.1;locus_tag=AC56_RS03120;product=protoheme IX biogenesis protein HemY;protein_id=WP_000921789.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	2348	3589	.	-	.	ID=gene-AC56_RS03115;Name=hemX;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;locus_tag=AC56_RS03115;old_locus_tag=AC56_4250
NZ_JJLS01000283.1	Protein Homology	CDS	2348	3589	.	-	0	ID=cds-WP_000139039.1;Parent=gene-AC56_RS03115;Dbxref=GenBank:WP_000139039.1;Name=WP_000139039.1;gbkey=CDS;gene=hemX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418247.1;locus_tag=AC56_RS03115;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_000139039.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	3611	4351	.	-	.	ID=gene-AC56_RS03110;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=AC56_RS03110;old_locus_tag=AC56_4251
NZ_JJLS01000283.1	Protein Homology	CDS	3611	4351	.	-	0	ID=cds-WP_000026047.1;Parent=gene-AC56_RS03110;Dbxref=GenBank:WP_000026047.1;Name=WP_000026047.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;gene=hemD;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418248.1;locus_tag=AC56_RS03110;product=uroporphyrinogen-III synthase;protein_id=WP_000026047.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	4348	5289	.	-	.	ID=gene-AC56_RS03105;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=AC56_RS03105;old_locus_tag=AC56_4252
NZ_JJLS01000283.1	Protein Homology	CDS	4348	5289	.	-	0	ID=cds-WP_001338644.1;Parent=gene-AC56_RS03105;Dbxref=GenBank:WP_001338644.1;Name=WP_001338644.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026260.1;locus_tag=AC56_RS03105;product=hydroxymethylbilane synthase;protein_id=WP_001338644.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	5676	8222	.	+	.	ID=gene-AC56_RS03100;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=AC56_RS03100;old_locus_tag=AC56_4253
NZ_JJLS01000283.1	Protein Homology	CDS	5676	8222	.	+	0	ID=cds-WP_000281668.1;Parent=gene-AC56_RS03100;Dbxref=GenBank:WP_000281668.1;Name=WP_000281668.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cyaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418250.1;locus_tag=AC56_RS03100;product=class I adenylate cyclase;protein_id=WP_000281668.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	8262	8582	.	-	.	ID=gene-AC56_RS03095;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=AC56_RS03095;old_locus_tag=AC56_4254
NZ_JJLS01000283.1	Protein Homology	CDS	8262	8582	.	-	0	ID=cds-WP_000999947.1;Parent=gene-AC56_RS03095;Dbxref=GenBank:WP_000999947.1;Name=WP_000999947.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999950.1;locus_tag=AC56_RS03095;product=iron donor protein CyaY;protein_id=WP_000999947.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	pseudogene	8708	8886	.	-	.	ID=gene-AC56_RS33450;Name=AC56_RS33450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33450;partial=true;pseudo=true;start_range=.,8708
NZ_JJLS01000283.1	Protein Homology	CDS	8708	8886	.	-	0	ID=cds-AC56_RS33450;Parent=gene-AC56_RS33450;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000580503.1;locus_tag=AC56_RS33450;partial=true;product=DKNYY family protein;pseudo=true;start_range=.,8708;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	9045	9248	.	+	.	ID=gene-AC56_RS03090;Name=lptM;gbkey=Gene;gene=lptM;gene_biotype=protein_coding;gene_synonym=yifL;locus_tag=AC56_RS03090;old_locus_tag=AC56_4256
NZ_JJLS01000283.1	Protein Homology	CDS	9045	9248	.	+	0	ID=cds-WP_000799889.1;Parent=gene-AC56_RS03090;Dbxref=GenBank:WP_000799889.1;Name=WP_000799889.1;gbkey=CDS;gene=lptM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709615.1;locus_tag=AC56_RS03090;product=LPS translocon maturation chaperone LptM;protein_id=WP_000799889.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	9285	10109	.	+	.	ID=gene-AC56_RS03085;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=AC56_RS03085;old_locus_tag=AC56_4257
NZ_JJLS01000283.1	Protein Homology	CDS	9285	10109	.	+	0	ID=cds-WP_001160654.1;Parent=gene-AC56_RS03085;Dbxref=GenBank:WP_001160654.1;Name=WP_001160654.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1;locus_tag=AC56_RS03085;product=diaminopimelate epimerase;protein_id=WP_001160654.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	10106	10813	.	+	.	ID=gene-AC56_RS03080;Name=yigA;gbkey=Gene;gene=yigA;gene_biotype=protein_coding;locus_tag=AC56_RS03080;old_locus_tag=AC56_4258
NZ_JJLS01000283.1	Protein Homology	CDS	10106	10813	.	+	0	ID=cds-WP_032279208.1;Parent=gene-AC56_RS03080;Dbxref=GenBank:WP_032279208.1;Name=WP_032279208.1;gbkey=CDS;gene=yigA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418255.1;locus_tag=AC56_RS03080;product=DUF484 domain-containing protein;protein_id=WP_032279208.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	10810	11706	.	+	.	ID=gene-AC56_RS03075;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=AC56_RS03075;old_locus_tag=AC56_4259
NZ_JJLS01000283.1	Protein Homology	CDS	10810	11706	.	+	0	ID=cds-WP_000130691.1;Parent=gene-AC56_RS03075;Dbxref=GenBank:WP_000130691.1;Name=WP_000130691.1;Ontology_term=GO:0006310,GO:0007059,GO:0015074,GO:0051301,GO:0003677;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,chromosome segregation|0007059||IEA,DNA integration|0015074||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418256.1;locus_tag=AC56_RS03075;product=tyrosine recombinase XerC;protein_id=WP_000130691.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	11706	12422	.	+	.	ID=gene-AC56_RS03070;Name=yigB;gbkey=Gene;gene=yigB;gene_biotype=protein_coding;locus_tag=AC56_RS03070;old_locus_tag=AC56_4260
NZ_JJLS01000283.1	Protein Homology	CDS	11706	12422	.	+	0	ID=cds-WP_032279209.1;Parent=gene-AC56_RS03070;Dbxref=GenBank:WP_032279209.1;Name=WP_032279209.1;gbkey=CDS;gene=yigB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418257.1;locus_tag=AC56_RS03070;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;protein_id=WP_032279209.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	12506	14668	.	+	.	ID=gene-AC56_RS03065;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=AC56_RS03065;old_locus_tag=AC56_4261
NZ_JJLS01000283.1	Protein Homology	CDS	12506	14668	.	+	0	ID=cds-WP_032279210.1;Parent=gene-AC56_RS03065;Dbxref=GenBank:WP_032279210.1;Name=WP_032279210.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524,GO:0016787;gbkey=CDS;gene=uvrD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418258.1;locus_tag=AC56_RS03065;product=DNA helicase II;protein_id=WP_032279210.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	14815	15579	.	-	.	ID=gene-AC56_RS03060;Name=yigE;gbkey=Gene;gene=yigE;gene_biotype=protein_coding;locus_tag=AC56_RS03060;old_locus_tag=AC56_4262
NZ_JJLS01000283.1	Protein Homology	CDS	14815	15579	.	-	0	ID=cds-WP_000951162.1;Parent=gene-AC56_RS03060;Dbxref=GenBank:WP_000951162.1;Name=WP_000951162.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=yigE;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312772.1;locus_tag=AC56_RS03060;product=phosphodiester glycosidase family protein;protein_id=WP_000951162.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	15741	15797	.	+	.	ID=gene-AC56_RS33455;Name=ysgD;gbkey=Gene;gene=ysgD;gene_biotype=protein_coding;locus_tag=AC56_RS33455
NZ_JJLS01000283.1	Protein Homology	CDS	15741	15797	.	+	0	ID=cds-WP_211180520.1;Parent=gene-AC56_RS33455;Dbxref=GenBank:WP_211180520.1;Name=WP_211180520.1;gbkey=CDS;gene=ysgD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051213.1;locus_tag=AC56_RS33455;product=protein YsgD;protein_id=WP_211180520.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	15949	16899	.	+	.	ID=gene-AC56_RS03050;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=AC56_RS03050;old_locus_tag=AC56_4264
NZ_JJLS01000283.1	Protein Homology	CDS	15949	16899	.	+	0	ID=cds-WP_000947159.1;Parent=gene-AC56_RS03050;Dbxref=GenBank:WP_000947159.1;Name=WP_000947159.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095,GO:0016020;gbkey=CDS;gene=corA;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=AC56_RS03050;product=magnesium/cobalt transporter CorA;protein_id=WP_000947159.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	16942	17322	.	-	.	ID=gene-AC56_RS03045;Name=yigF;gbkey=Gene;gene=yigF;gene_biotype=protein_coding;locus_tag=AC56_RS03045;old_locus_tag=AC56_4265
NZ_JJLS01000283.1	Protein Homology	CDS	16942	17322	.	-	0	ID=cds-WP_000032581.1;Parent=gene-AC56_RS03045;Dbxref=GenBank:WP_000032581.1;Name=WP_000032581.1;gbkey=CDS;gene=yigF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418261.1;locus_tag=AC56_RS03045;product=DUF2628 domain-containing protein;protein_id=WP_000032581.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	17336	17716	.	-	.	ID=gene-AC56_RS03040;Name=yigG;gbkey=Gene;gene=yigG;gene_biotype=protein_coding;locus_tag=AC56_RS03040;old_locus_tag=AC56_4266
NZ_JJLS01000283.1	Protein Homology	CDS	17336	17716	.	-	0	ID=cds-WP_000944218.1;Parent=gene-AC56_RS03040;Dbxref=GenBank:WP_000944218.1;Name=WP_000944218.1;gbkey=CDS;gene=yigG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418262.2;locus_tag=AC56_RS03040;product=protein YigG;protein_id=WP_000944218.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	17811	18701	.	-	.	ID=gene-AC56_RS03035;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=AC56_RS03035;old_locus_tag=AC56_4267
NZ_JJLS01000283.1	Protein Homology	CDS	17811	18701	.	-	0	ID=cds-WP_000339104.1;Parent=gene-AC56_RS03035;Dbxref=GenBank:WP_000339104.1;Name=WP_000339104.1;Ontology_term=GO:0016020;gbkey=CDS;gene=rarD;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026262.1;locus_tag=AC56_RS03035;product=EamA family transporter RarD;protein_id=WP_000339104.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	18753	19220	.	-	.	ID=gene-AC56_RS03030;Name=yigI;gbkey=Gene;gene=yigI;gene_biotype=protein_coding;locus_tag=AC56_RS03030;old_locus_tag=AC56_4268
NZ_JJLS01000283.1	Protein Homology	CDS	18753	19220	.	-	0	ID=cds-WP_001277142.1;Parent=gene-AC56_RS03030;Dbxref=GenBank:WP_001277142.1;Name=WP_001277142.1;gbkey=CDS;gene=yigI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312777.2;locus_tag=AC56_RS03030;product=acyl-CoA thioesterase YigI;protein_id=WP_001277142.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	19385	20254	.	+	.	ID=gene-AC56_RS03025;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=protein_coding;locus_tag=AC56_RS03025;old_locus_tag=AC56_4269
NZ_JJLS01000283.1	Protein Homology	CDS	19385	20254	.	+	0	ID=cds-WP_001259700.1;Parent=gene-AC56_RS03025;Dbxref=GenBank:WP_001259700.1;Name=WP_001259700.1;Ontology_term=GO:0006629,GO:0004620;gbkey=CDS;gene=pldA;go_function=phospholipase activity|0004620||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312778.1;locus_tag=AC56_RS03025;product=phospholipase A;protein_id=WP_001259700.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	20387	22216	.	+	.	ID=gene-AC56_RS03020;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=AC56_RS03020;old_locus_tag=AC56_4270
NZ_JJLS01000283.1	Protein Homology	CDS	20387	22216	.	+	0	ID=cds-WP_001395096.1;Parent=gene-AC56_RS03020;Dbxref=GenBank:WP_001395096.1;Name=WP_001395096.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026263.3;locus_tag=AC56_RS03020;product=ATP-dependent DNA helicase RecQ;protein_id=WP_001395096.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	22280	22900	.	+	.	ID=gene-AC56_RS03015;Name=rhtC;gbkey=Gene;gene=rhtC;gene_biotype=protein_coding;locus_tag=AC56_RS03015;old_locus_tag=AC56_4271
NZ_JJLS01000283.1	Protein Homology	CDS	22280	22900	.	+	0	ID=cds-WP_000928821.1;Parent=gene-AC56_RS03015;Dbxref=GenBank:WP_000928821.1;Name=WP_000928821.1;Ontology_term=GO:0006865;gbkey=CDS;gene=rhtC;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312780.1;locus_tag=AC56_RS03015;product=threonine export protein RhtC;protein_id=WP_000928821.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	22962	23582	.	-	.	ID=gene-AC56_RS03010;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=AC56_RS03010;old_locus_tag=AC56_4272
NZ_JJLS01000283.1	Protein Homology	CDS	22962	23582	.	-	0	ID=cds-WP_000171710.1;Parent=gene-AC56_RS03010;Dbxref=GenBank:WP_000171710.1;Name=WP_000171710.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=rhtB;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312781.1;locus_tag=AC56_RS03010;product=homoserine/homoserine lactone efflux protein;protein_id=WP_000171710.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	23693	24715	.	+	.	ID=gene-AC56_RS03005;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=AC56_RS03005;old_locus_tag=AC56_4273
NZ_JJLS01000283.1	Protein Homology	CDS	23693	24715	.	+	0	ID=cds-WP_000487640.1;Parent=gene-AC56_RS03005;Dbxref=GenBank:WP_000487640.1;Name=WP_000487640.1;gbkey=CDS;gene=pldB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026266.1;locus_tag=AC56_RS03005;product=lysophospholipase L2;protein_id=WP_000487640.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	24723	25523	.	+	.	ID=gene-AC56_RS03000;Name=yigL;gbkey=Gene;gene=yigL;gene_biotype=protein_coding;locus_tag=AC56_RS03000;old_locus_tag=AC56_4274
NZ_JJLS01000283.1	Protein Homology	CDS	24723	25523	.	+	0	ID=cds-WP_000285353.1;Parent=gene-AC56_RS03000;Dbxref=GenBank:WP_000285353.1;Name=WP_000285353.1;gbkey=CDS;gene=yigL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312783.1;locus_tag=AC56_RS03000;product=sugar/pyridoxal phosphate phosphatase YigL;protein_id=WP_000285353.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	25599	26498	.	+	.	ID=gene-AC56_RS02995;Name=bioP;gbkey=Gene;gene=bioP;gene_biotype=protein_coding;locus_tag=AC56_RS02995;old_locus_tag=AC56_4275
NZ_JJLS01000283.1	Protein Homology	CDS	25599	26498	.	+	0	ID=cds-WP_001196238.1;Parent=gene-AC56_RS02995;Dbxref=GenBank:WP_001196238.1;Name=WP_001196238.1;gbkey=CDS;gene=bioP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312784.1;locus_tag=AC56_RS02995;product=biotin transporter;protein_id=WP_001196238.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	26386	27339	.	-	.	ID=gene-AC56_RS0127335;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=AC56_RS0127335
NZ_JJLS01000283.1	Protein Homology	CDS	26386	27339	.	-	0	ID=cds-WP_000573621.1;Parent=gene-AC56_RS0127335;Dbxref=GenBank:WP_000573621.1;Name=WP_000573621.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=metR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312785.1;locus_tag=AC56_RS0127335;product=HTH-type transcriptional regulator MetR;protein_id=WP_000573621.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	27576	29837	.	+	.	ID=gene-AC56_RS02990;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=AC56_RS02990;old_locus_tag=AC56_4276
NZ_JJLS01000283.1	Protein Homology	CDS	27576	29837	.	+	0	ID=cds-WP_000153910.1;Parent=gene-AC56_RS02990;Dbxref=GenBank:WP_000153910.1;Name=WP_000153910.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418273.1;locus_tag=AC56_RS02990;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_000153910.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	29877	30692	.	-	.	ID=gene-AC56_RS02985;Name=ysgA;gbkey=Gene;gene=ysgA;gene_biotype=protein_coding;locus_tag=AC56_RS02985;old_locus_tag=AC56_4277
NZ_JJLS01000283.1	Protein Homology	CDS	29877	30692	.	-	0	ID=cds-WP_012304928.1;Parent=gene-AC56_RS02985;Dbxref=GenBank:WP_012304928.1;Name=WP_012304928.1;Ontology_term=GO:0016787,GO:0005829;gbkey=CDS;gene=ysgA;go_component=cytosol|0005829||IEA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312787.2;locus_tag=AC56_RS02985;product=dienelactone hydrolase family protein;protein_id=WP_012304928.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	30954	31715	.	+	.	ID=gene-AC56_RS02980;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=AC56_RS02980;old_locus_tag=AC56_4278
NZ_JJLS01000283.1	Protein Homology	CDS	30954	31715	.	+	0	ID=cds-WP_000045180.1;Parent=gene-AC56_RS02980;Dbxref=GenBank:WP_000045180.1;Name=WP_000045180.1;Ontology_term=GO:0009116,GO:0016763;gbkey=CDS;gene=udp;go_function=pentosyltransferase activity|0016763||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312788.1;locus_tag=AC56_RS02980;product=uridine phosphorylase;protein_id=WP_000045180.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	31856	33283	.	+	.	ID=gene-AC56_RS02975;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=AC56_RS02975;old_locus_tag=AC56_4279
NZ_JJLS01000283.1	Protein Homology	CDS	31856	33283	.	+	0	ID=cds-WP_000347717.1;Parent=gene-AC56_RS02975;Dbxref=GenBank:WP_000347717.1;Name=WP_000347717.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312789.1;locus_tag=AC56_RS02975;product=DNA recombination protein RmuC;protein_id=WP_000347717.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	33378	34133	.	+	.	ID=gene-AC56_RS02970;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=AC56_RS02970;old_locus_tag=AC56_4280
NZ_JJLS01000283.1	Protein Homology	CDS	33378	34133	.	+	0	ID=cds-WP_000227958.1;Parent=gene-AC56_RS02970;Dbxref=GenBank:WP_000227958.1;Name=WP_000227958.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312790.1;locus_tag=AC56_RS02970;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_000227958.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	34147	34752	.	+	.	ID=gene-AC56_RS02965;Name=ubiJ;gbkey=Gene;gene=ubiJ;gene_biotype=protein_coding;locus_tag=AC56_RS02965;old_locus_tag=AC56_4281
NZ_JJLS01000283.1	Protein Homology	CDS	34147	34752	.	+	0	ID=cds-WP_001295259.1;Parent=gene-AC56_RS02965;Dbxref=GenBank:WP_001295259.1;Name=WP_001295259.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiJ;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418278.1;locus_tag=AC56_RS02965;product=ubiquinone biosynthesis protein UbiJ;protein_id=WP_001295259.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	34749	36389	.	+	.	ID=gene-AC56_RS02960;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=AC56_RS02960;old_locus_tag=AC56_4282
NZ_JJLS01000283.1	Protein Homology	CDS	34749	36389	.	+	0	ID=cds-WP_000187530.1;Parent=gene-AC56_RS02960;Dbxref=GenBank:WP_000187530.1;Name=WP_000187530.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312792.1;locus_tag=AC56_RS02960;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_000187530.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	36468	36737	.	+	.	ID=gene-AC56_RS02955;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=AC56_RS02955;old_locus_tag=AC56_4283
NZ_JJLS01000283.1	Protein Homology	CDS	36468	36737	.	+	0	ID=cds-WP_001295260.1;Parent=gene-AC56_RS02955;Dbxref=GenBank:WP_001295260.1;Name=WP_001295260.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312793.1;locus_tag=AC56_RS02955;product=Sec-independent protein translocase subunit TatA;protein_id=WP_001295260.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	36741	37256	.	+	.	ID=gene-AC56_RS02950;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=AC56_RS02950;old_locus_tag=AC56_4284
NZ_JJLS01000283.1	Protein Homology	CDS	36741	37256	.	+	0	ID=cds-WP_000459594.1;Parent=gene-AC56_RS02950;Dbxref=GenBank:WP_000459594.1;Name=WP_000459594.1;Ontology_term=GO:0015628,GO:0008320,GO:0016020;gbkey=CDS;gene=tatB;go_component=membrane|0016020||IEA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312794.1;locus_tag=AC56_RS02950;product=Sec-independent protein translocase protein TatB;protein_id=WP_000459594.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	37259	38035	.	+	.	ID=gene-AC56_RS02945;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=AC56_RS02945;old_locus_tag=AC56_4285
NZ_JJLS01000283.1	Protein Homology	CDS	37259	38035	.	+	0	ID=cds-WP_000109943.1;Parent=gene-AC56_RS02945;Dbxref=GenBank:WP_000109943.1;Name=WP_000109943.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312795.1;locus_tag=AC56_RS02945;product=Sec-independent protein translocase subunit TatC;protein_id=WP_000109943.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	38077	38859	.	+	.	ID=gene-AC56_RS02940;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=AC56_RS02940;old_locus_tag=AC56_4286
NZ_JJLS01000283.1	Protein Homology	CDS	38077	38859	.	+	0	ID=cds-WP_001301305.1;Parent=gene-AC56_RS02940;Dbxref=GenBank:WP_001301305.1;Name=WP_001301305.1;Ontology_term=GO:0008408;gbkey=CDS;gene=tatD;go_function=3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312796.1;locus_tag=AC56_RS02940;product=3'-5' ssDNA/RNA exonuclease TatD;protein_id=WP_001301305.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	38856	39344	.	-	.	ID=gene-AC56_RS02935;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=AC56_RS02935;old_locus_tag=AC56_4287
NZ_JJLS01000283.1	Protein Homology	CDS	38856	39344	.	-	0	ID=cds-WP_001192396.1;Parent=gene-AC56_RS02935;Dbxref=GenBank:WP_001192396.1;Name=WP_001192396.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rfaH;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312797.1;locus_tag=AC56_RS02935;product=transcription/translation regulatory transformer protein RfaH;protein_id=WP_001192396.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	39511	41004	.	+	.	ID=gene-AC56_RS02930;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=AC56_RS02930;old_locus_tag=AC56_4288
NZ_JJLS01000283.1	Protein Homology	CDS	39511	41004	.	+	0	ID=cds-WP_000339804.1;Parent=gene-AC56_RS02930;Dbxref=GenBank:WP_000339804.1;Name=WP_000339804.1;Ontology_term=GO:0016831;gbkey=CDS;gene=ubiD;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418285.1;locus_tag=AC56_RS02930;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=WP_000339804.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	41050	41751	.	+	.	ID=gene-AC56_RS02925;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;locus_tag=AC56_RS02925;old_locus_tag=AC56_4289
NZ_JJLS01000283.1	Protein Homology	CDS	41050	41751	.	+	0	ID=cds-WP_000209826.1;Parent=gene-AC56_RS02925;Dbxref=GenBank:WP_000209826.1;Name=WP_000209826.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fre;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312799.1;locus_tag=AC56_RS02925;product=NAD(P)H-flavin reductase;protein_id=WP_000209826.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	42034	43197	.	-	.	ID=gene-AC56_RS02920;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=AC56_RS02920;old_locus_tag=AC56_4290
NZ_JJLS01000283.1	Protein Homology	CDS	42034	43197	.	-	0	ID=cds-WP_000438725.1;Parent=gene-AC56_RS02920;Dbxref=GenBank:WP_000438725.1;Name=WP_000438725.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadA;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026272.1;locus_tag=AC56_RS02920;product=acetyl-CoA C-acyltransferase FadA;protein_id=WP_000438725.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	43207	45396	.	-	.	ID=gene-AC56_RS02915;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=AC56_RS02915;old_locus_tag=AC56_4291
NZ_JJLS01000283.1	Protein Homology	CDS	43207	45396	.	-	0	ID=cds-WP_000965936.1;Parent=gene-AC56_RS02915;Dbxref=GenBank:WP_000965936.1;Name=WP_000965936.1;Ontology_term=GO:0009062,GO:0003857,GO:0004165,GO:0004300,GO:0008692,GO:0036125;gbkey=CDS;gene=fadB;go_component=fatty acid beta-oxidation multienzyme complex|0036125||IEA;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,delta(3)-delta(2)-enoyl-CoA isomerase activity|0004165||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418288.1;locus_tag=AC56_RS02915;product=fatty acid oxidation complex subunit alpha FadB;protein_id=WP_000965936.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	45586	46917	.	+	.	ID=gene-AC56_RS02910;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=AC56_RS02910;old_locus_tag=AC56_4292
NZ_JJLS01000283.1	Protein Homology	CDS	45586	46917	.	+	0	ID=cds-WP_000444561.1;Parent=gene-AC56_RS02910;Dbxref=GenBank:WP_000444561.1;Name=WP_000444561.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418289.1;locus_tag=AC56_RS02910;product=Xaa-Pro dipeptidase;protein_id=WP_000444561.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	pseudogene	46917	47518	.	+	.	ID=gene-AC56_RS02905;Name=yigZ;gbkey=Gene;gene=yigZ;gene_biotype=pseudogene;locus_tag=AC56_RS02905;old_locus_tag=AC56_4293;pseudo=true
NZ_JJLS01000283.1	Protein Homology	CDS	46917	47518	.	+	0	ID=cds-AC56_RS02905;Parent=gene-AC56_RS02905;Note=frameshifted;gbkey=CDS;gene=yigZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418290.4;locus_tag=AC56_RS02905;product=IMPACT family protein;pseudo=true;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	47557	49008	.	+	.	ID=gene-AC56_RS02900;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=AC56_RS02900;old_locus_tag=AC56_4294
NZ_JJLS01000283.1	Protein Homology	CDS	47557	49008	.	+	0	ID=cds-WP_000545677.1;Parent=gene-AC56_RS02900;Dbxref=GenBank:WP_000545677.1;Name=WP_000545677.1;gbkey=CDS;gene=trkH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146450.1;locus_tag=AC56_RS02900;product=Trk system potassium transporter TrkH;protein_id=WP_000545677.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	49020	49565	.	+	.	ID=gene-AC56_RS02895;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=AC56_RS02895;old_locus_tag=AC56_4295
NZ_JJLS01000283.1	Protein Homology	CDS	49020	49565	.	+	0	ID=cds-WP_000853959.1;Parent=gene-AC56_RS02895;Dbxref=GenBank:WP_000853959.1;Name=WP_000853959.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312805.1;locus_tag=AC56_RS02895;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=WP_000853959.1;transl_table=11
NZ_JJLS01000283.1	RefSeq	gene	49943	51431	.	+	.	ID=gene-AC56_RS02890;Name=AC56_RS02890;end_range=51431,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC56_RS02890;old_locus_tag=AC56_4296;partial=true
NZ_JJLS01000283.1	cmsearch	rRNA	49943	51431	.	+	.	ID=rna-AC56_RS02890;Parent=gene-AC56_RS02890;Dbxref=RFAM:RF00177;end_range=51431,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS02890;partial=true;product=16S ribosomal RNA
NZ_JJLS01000283.1	cmsearch	exon	49943	51431	.	+	.	ID=exon-AC56_RS02890-1;Parent=rna-AC56_RS02890;Dbxref=RFAM:RF00177;end_range=51431,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS02890;partial=true;product=16S ribosomal RNA
##sequence-region NZ_JJLS01000284.1 1 3360
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000284.1	RefSeq	region	1	3360	.	+	.	ID=NZ_JJLS01000284.1:1..3360;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000284.1	RefSeq	gene	249	3151	.	+	.	ID=gene-AC56_RS02885;Name=AC56_RS02885;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC56_RS02885;old_locus_tag=AC56_4297
NZ_JJLS01000284.1	cmsearch	rRNA	249	3151	.	+	.	ID=rna-AC56_RS02885;Parent=gene-AC56_RS02885;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS02885;product=23S ribosomal RNA
NZ_JJLS01000284.1	cmsearch	exon	249	3151	.	+	.	ID=exon-AC56_RS02885-1;Parent=rna-AC56_RS02885;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS02885;product=23S ribosomal RNA
NZ_JJLS01000284.1	RefSeq	gene	3247	3360	.	+	.	ID=gene-AC56_RS02880;Name=rrf;end_range=3360,.;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AC56_RS02880;old_locus_tag=AC56_4300;partial=true
NZ_JJLS01000284.1	cmsearch	rRNA	3247	3360	.	+	.	ID=rna-AC56_RS02880;Parent=gene-AC56_RS02880;Dbxref=RFAM:RF00001;end_range=3360,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS02880;partial=true;product=5S ribosomal RNA
NZ_JJLS01000284.1	cmsearch	exon	3247	3360	.	+	.	ID=exon-AC56_RS02880-1;Parent=rna-AC56_RS02880;Dbxref=RFAM:RF00001;end_range=3360,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS02880;partial=true;product=5S ribosomal RNA
##sequence-region NZ_JJLS01000285.1 1 7495
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000285.1	RefSeq	region	1	7495	.	+	.	ID=NZ_JJLS01000285.1:1..7495;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000285.1	RefSeq	gene	1	2893	.	+	.	ID=gene-AC56_RS02875;Name=AC56_RS02875;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC56_RS02875;old_locus_tag=AC56_4301;partial=true;start_range=.,1
NZ_JJLS01000285.1	cmsearch	rRNA	1	2893	.	+	.	ID=rna-AC56_RS02875;Parent=gene-AC56_RS02875;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS02875;partial=true;product=23S ribosomal RNA;start_range=.,1
NZ_JJLS01000285.1	cmsearch	exon	1	2893	.	+	.	ID=exon-AC56_RS02875-1;Parent=rna-AC56_RS02875;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS02875;partial=true;product=23S ribosomal RNA;start_range=.,1
NZ_JJLS01000285.1	RefSeq	gene	2989	3104	.	+	.	ID=gene-AC56_RS02870;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AC56_RS02870;old_locus_tag=AC56_4304
NZ_JJLS01000285.1	cmsearch	rRNA	2989	3104	.	+	.	ID=rna-AC56_RS02870;Parent=gene-AC56_RS02870;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS02870;product=5S ribosomal RNA
NZ_JJLS01000285.1	cmsearch	exon	2989	3104	.	+	.	ID=exon-AC56_RS02870-1;Parent=rna-AC56_RS02870;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS02870;product=5S ribosomal RNA
NZ_JJLS01000285.1	RefSeq	gene	3208	3735	.	-	.	ID=gene-AC56_RS02865;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=AC56_RS02865;old_locus_tag=AC56_4305
NZ_JJLS01000285.1	Protein Homology	CDS	3208	3735	.	-	0	ID=cds-WP_000907622.1;Parent=gene-AC56_RS02865;Dbxref=GenBank:WP_000907622.1;Name=WP_000907622.1;Ontology_term=GO:0006777,GO:0005525;gbkey=CDS;gene=mobB;go_function=GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418293.2;locus_tag=AC56_RS02865;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;protein_id=WP_000907622.1;transl_table=11
NZ_JJLS01000285.1	RefSeq	gene	3717	4301	.	-	.	ID=gene-AC56_RS02860;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=AC56_RS02860;old_locus_tag=AC56_4306
NZ_JJLS01000285.1	Protein Homology	CDS	3717	4301	.	-	0	ID=cds-WP_001052181.1;Parent=gene-AC56_RS02860;Dbxref=GenBank:WP_001052181.1;Name=WP_001052181.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=mobA;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418294.1;locus_tag=AC56_RS02860;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_001052181.1;transl_table=11
NZ_JJLS01000285.1	RefSeq	gene	4371	4640	.	+	.	ID=gene-AC56_RS02855;Name=yihD;gbkey=Gene;gene=yihD;gene_biotype=protein_coding;locus_tag=AC56_RS02855;old_locus_tag=AC56_4307
NZ_JJLS01000285.1	Protein Homology	CDS	4371	4640	.	+	0	ID=cds-WP_001295263.1;Parent=gene-AC56_RS02855;Dbxref=GenBank:WP_001295263.1;Name=WP_001295263.1;gbkey=CDS;gene=yihD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966571.1;locus_tag=AC56_RS02855;product=YihD family protein;protein_id=WP_001295263.1;transl_table=11
NZ_JJLS01000285.1	RefSeq	gene	4717	5703	.	+	.	ID=gene-AC56_RS02850;Name=srkA;gbkey=Gene;gene=srkA;gene_biotype=protein_coding;locus_tag=AC56_RS02850;old_locus_tag=AC56_4308
NZ_JJLS01000285.1	Protein Homology	CDS	4717	5703	.	+	0	ID=cds-WP_001065497.1;Parent=gene-AC56_RS02850;Dbxref=GenBank:WP_001065497.1;Name=WP_001065497.1;gbkey=CDS;gene=srkA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418296.1;locus_tag=AC56_RS02850;product=stress response kinase SrkA;protein_id=WP_001065497.1;transl_table=11
NZ_JJLS01000285.1	RefSeq	gene	5720	6346	.	+	.	ID=gene-AC56_RS02845;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=AC56_RS02845;old_locus_tag=AC56_4309
NZ_JJLS01000285.1	Protein Homology	CDS	5720	6346	.	+	0	ID=cds-WP_000725337.1;Parent=gene-AC56_RS02845;Dbxref=GenBank:WP_000725337.1;Name=WP_000725337.1;Ontology_term=GO:0016491;gbkey=CDS;gene=dsbA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312810.1;locus_tag=AC56_RS02845;product=thiol:disulfide interchange protein DsbA;protein_id=WP_000725337.1;transl_table=11
NZ_JJLS01000285.1	RefSeq	pseudogene	6501	7055	.	+	.	ID=gene-AC56_RS02840;Name=AC56_RS02840;end_range=7055,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS02840;old_locus_tag=AC56_4310;partial=true;pseudo=true
NZ_JJLS01000285.1	Protein Homology	CDS	6501	7055	.	+	0	ID=cds-AC56_RS02840;Parent=gene-AC56_RS02840;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=7055,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418298.4;locus_tag=AC56_RS02840;partial=true;product=DUF945 family protein;pseudo=true;transl_table=11
NZ_JJLS01000285.1	RefSeq	pseudogene	7110	7495	.	+	.	ID=gene-AC56_RS0127340;Name=AC56_RS0127340;end_range=7495,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0127340;partial=true;pseudo=true
NZ_JJLS01000285.1	Protein Homology	CDS	7110	7495	.	+	0	ID=cds-AC56_RS0127340;Parent=gene-AC56_RS0127340;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=7495,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS0127340;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000286.1 1 17633
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000286.1	RefSeq	region	1	17633	.	+	.	ID=NZ_JJLS01000286.1:1..17633;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000286.1	RefSeq	gene	1	434	.	+	.	ID=gene-AC56_RS02835;Name=AC56_RS02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS02835;old_locus_tag=AC56_4312;partial=true;start_range=.,1
NZ_JJLS01000286.1	Protein Homology	CDS	1	434	.	+	2	ID=cds-WP_023351554.1;Parent=gene-AC56_RS02835;Dbxref=GenBank:WP_023351554.1;Name=WP_023351554.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS02835;partial=true;product=IS1 family transposase;protein_id=WP_023351554.1;start_range=.,1;transl_table=11
NZ_JJLS01000286.1	RefSeq	pseudogene	451	1335	.	+	.	ID=gene-AC56_RS02830;Name=AC56_RS02830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS02830;old_locus_tag=AC56_4313;partial=true;pseudo=true;start_range=.,451
NZ_JJLS01000286.1	Protein Homology	CDS	451	1335	.	+	0	ID=cds-AC56_RS02830;Parent=gene-AC56_RS02830;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418298.4;locus_tag=AC56_RS02830;partial=true;product=DUF945 family protein;pseudo=true;start_range=.,451;transl_table=11
NZ_JJLS01000286.1	RefSeq	gene	1376	2308	.	-	.	ID=gene-AC56_RS02825;Name=yihG;gbkey=Gene;gene=yihG;gene_biotype=protein_coding;locus_tag=AC56_RS02825;old_locus_tag=AC56_4314
NZ_JJLS01000286.1	Protein Homology	CDS	1376	2308	.	-	0	ID=cds-WP_001303740.1;Parent=gene-AC56_RS02825;Dbxref=GenBank:WP_001303740.1;Name=WP_001303740.1;Ontology_term=GO:0016746;gbkey=CDS;gene=yihG;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312812.1;locus_tag=AC56_RS02825;product=acyltransferase;protein_id=WP_001303740.1;transl_table=11
NZ_JJLS01000286.1	RefSeq	gene	2672	5458	.	+	.	ID=gene-AC56_RS02820;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=AC56_RS02820;old_locus_tag=AC56_4316
NZ_JJLS01000286.1	Protein Homology	CDS	2672	5458	.	+	0	ID=cds-WP_000250006.1;Parent=gene-AC56_RS02820;Dbxref=GenBank:WP_000250006.1;Name=WP_000250006.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418300.1;locus_tag=AC56_RS02820;product=DNA polymerase I;protein_id=WP_000250006.1;transl_table=11
NZ_JJLS01000286.1	RefSeq	gene	5840	6472	.	-	.	ID=gene-AC56_RS02815;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=AC56_RS02815;old_locus_tag=AC56_4317
NZ_JJLS01000286.1	Protein Homology	CDS	5840	6472	.	-	0	ID=cds-WP_000183349.1;Parent=gene-AC56_RS02815;Dbxref=GenBank:WP_000183349.1;Name=WP_000183349.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418301.3;locus_tag=AC56_RS02815;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_000183349.1;transl_table=11
NZ_JJLS01000286.1	RefSeq	pseudogene	6769	6935	.	+	.	ID=gene-AC56_RS33460;Name=AC56_RS33460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33460;pseudo=true
NZ_JJLS01000286.1	Protein Homology	CDS	6769	6935	.	+	0	ID=cds-AC56_RS33460;Parent=gene-AC56_RS33460;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000546704.1;locus_tag=AC56_RS33460;product=hypothetical protein;pseudo=true;transl_table=11
NZ_JJLS01000286.1	RefSeq	gene	7054	7560	.	+	.	ID=gene-AC56_RS02810;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=protein_coding;locus_tag=AC56_RS02810;old_locus_tag=AC56_4318
NZ_JJLS01000286.1	Protein Homology	CDS	7054	7560	.	+	0	ID=cds-WP_001300530.1;Parent=gene-AC56_RS02810;Dbxref=GenBank:WP_001300530.1;Name=WP_001300530.1;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312815.1;locus_tag=AC56_RS02810;product=Der GTPase-activating protein YihI;protein_id=WP_001300530.1;transl_table=11
NZ_JJLS01000286.1	RefSeq	gene	7749	9122	.	+	.	ID=gene-AC56_RS02805;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=AC56_RS02805;old_locus_tag=AC56_4320
NZ_JJLS01000286.1	Protein Homology	CDS	7749	9122	.	+	0	ID=cds-WP_032279217.1;Parent=gene-AC56_RS02805;Dbxref=GenBank:WP_032279217.1;Name=WP_032279217.1;Ontology_term=GO:0006779,GO:0004109,GO:0005737;gbkey=CDS;gene=hemN;go_component=cytoplasm|0005737||IEA;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312816.2;locus_tag=AC56_RS02805;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_032279217.1;transl_table=11
NZ_JJLS01000286.1	RefSeq	gene	9312	9422	.	-	.	ID=gene-AC56_RS0127350;Name=yshB;gbkey=Gene;gene=yshB;gene_biotype=protein_coding;locus_tag=AC56_RS0127350
NZ_JJLS01000286.1	Protein Homology	CDS	9312	9422	.	-	0	ID=cds-WP_032279218.1;Parent=gene-AC56_RS0127350;Dbxref=GenBank:WP_032279218.1;Name=WP_032279218.1;gbkey=CDS;gene=yshB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791260.1;locus_tag=AC56_RS0127350;product=YshB family small membrane protein;protein_id=WP_032279218.1;transl_table=11
NZ_JJLS01000286.1	RefSeq	gene	9534	10943	.	-	.	ID=gene-AC56_RS02800;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=AC56_RS02800;old_locus_tag=AC56_4322
NZ_JJLS01000286.1	Protein Homology	CDS	9534	10943	.	-	0	ID=cds-WP_001188775.1;Parent=gene-AC56_RS02800;Dbxref=GenBank:WP_001188775.1;Name=WP_001188775.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=glnG;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133942.1;locus_tag=AC56_RS02800;product=nitrogen regulation protein NR(I);protein_id=WP_001188775.1;transl_table=11
NZ_JJLS01000286.1	RefSeq	gene	10955	12004	.	-	.	ID=gene-AC56_RS02795;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=AC56_RS02795;old_locus_tag=AC56_4323
NZ_JJLS01000286.1	Protein Homology	CDS	10955	12004	.	-	0	ID=cds-WP_000190577.1;Parent=gene-AC56_RS02795;Dbxref=GenBank:WP_000190577.1;Name=WP_000190577.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312818.1;locus_tag=AC56_RS02795;product=nitrogen regulation protein NR(II);protein_id=WP_000190577.1;transl_table=11
NZ_JJLS01000286.1	RefSeq	gene	12290	13699	.	-	.	ID=gene-AC56_RS02790;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=AC56_RS02790;old_locus_tag=AC56_4324
NZ_JJLS01000286.1	Protein Homology	CDS	12290	13699	.	-	0	ID=cds-WP_001271717.1;Parent=gene-AC56_RS02790;Dbxref=GenBank:WP_001271717.1;Name=WP_001271717.1;Ontology_term=GO:0006542,GO:0008152,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233234.1;locus_tag=AC56_RS02790;product=glutamate--ammonia ligase;protein_id=WP_001271717.1;transl_table=11
NZ_JJLS01000286.1	RefSeq	gene	14072	15895	.	+	.	ID=gene-AC56_RS02785;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=AC56_RS02785;old_locus_tag=AC56_4325
NZ_JJLS01000286.1	Protein Homology	CDS	14072	15895	.	+	0	ID=cds-WP_000570668.1;Parent=gene-AC56_RS02785;Dbxref=GenBank:WP_000570668.1;Name=WP_000570668.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312820.1;locus_tag=AC56_RS02785;product=ribosome-dependent GTPase TypA;protein_id=WP_000570668.1;transl_table=11
NZ_JJLS01000286.1	RefSeq	gene	16112	16822	.	+	.	ID=gene-AC56_RS02780;Name=yihL;gbkey=Gene;gene=yihL;gene_biotype=protein_coding;locus_tag=AC56_RS02780;old_locus_tag=AC56_4326
NZ_JJLS01000286.1	Protein Homology	CDS	16112	16822	.	+	0	ID=cds-WP_000829798.1;Parent=gene-AC56_RS02780;Dbxref=GenBank:WP_000829798.1;Name=WP_000829798.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=yihL;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312821.1;locus_tag=AC56_RS02780;product=GntR family transcriptional regulator;protein_id=WP_000829798.1;transl_table=11
NZ_JJLS01000286.1	RefSeq	pseudogene	16857	17294	.	+	.	ID=gene-AC56_RS02775;Name=AC56_RS02775;end_range=17294,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS02775;old_locus_tag=AC56_4327;partial=true;pseudo=true
NZ_JJLS01000286.1	Protein Homology	CDS	16857	17294	.	+	0	ID=cds-AC56_RS02775;Parent=gene-AC56_RS02775;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=17294,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001309101.1;locus_tag=AC56_RS02775;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_JJLS01000286.1	RefSeq	gene	17351	17633	.	-	.	ID=gene-AC56_RS02770;Name=AC56_RS02770;end_range=17633,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS02770;old_locus_tag=AC56_4328;partial=true
NZ_JJLS01000286.1	Protein Homology	CDS	17351	17633	.	-	1	ID=cds-WP_032175684.1-2;Parent=gene-AC56_RS02770;Dbxref=GenBank:WP_032175684.1;Name=WP_032175684.1;end_range=17633,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS02770;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032175684.1;transl_table=11
##sequence-region NZ_JJLS01000287.1 1 17711
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000287.1	RefSeq	region	1	17711	.	+	.	ID=NZ_JJLS01000287.1:1..17711;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000287.1	RefSeq	gene	28	1269	.	-	.	ID=gene-AC56_RS02765;Name=yihS;gbkey=Gene;gene=yihS;gene_biotype=protein_coding;locus_tag=AC56_RS02765;old_locus_tag=AC56_4329
NZ_JJLS01000287.1	Protein Homology	CDS	28	1269	.	-	0	ID=cds-WP_000870916.1-2;Parent=gene-AC56_RS02765;Dbxref=GenBank:WP_000870916.1;Name=WP_000870916.1;gbkey=CDS;gene=yihS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418316.4;locus_tag=AC56_RS02765;product=sulfoquinovose isomerase;protein_id=WP_000870916.1;transl_table=11
NZ_JJLS01000287.1	RefSeq	gene	1286	2164	.	-	.	ID=gene-AC56_RS02760;Name=yihT;gbkey=Gene;gene=yihT;gene_biotype=protein_coding;locus_tag=AC56_RS02760;old_locus_tag=AC56_4330
NZ_JJLS01000287.1	Protein Homology	CDS	1286	2164	.	-	0	ID=cds-WP_001046453.1;Parent=gene-AC56_RS02760;Dbxref=GenBank:WP_001046453.1;Name=WP_001046453.1;gbkey=CDS;gene=yihT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418317.1;locus_tag=AC56_RS02760;product=sulfofructosephosphate aldolase;protein_id=WP_001046453.1;transl_table=11
NZ_JJLS01000287.1	RefSeq	gene	2188	3084	.	-	.	ID=gene-AC56_RS02755;Name=yihU;gbkey=Gene;gene=yihU;gene_biotype=protein_coding;locus_tag=AC56_RS02755;old_locus_tag=AC56_4331
NZ_JJLS01000287.1	Protein Homology	CDS	2188	3084	.	-	0	ID=cds-WP_000718893.1;Parent=gene-AC56_RS02755;Dbxref=GenBank:WP_000718893.1;Name=WP_000718893.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yihU;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418318.1;locus_tag=AC56_RS02755;product=sulfolactaldehyde 3-reductase;protein_id=WP_000718893.1;transl_table=11
NZ_JJLS01000287.1	RefSeq	gene	3252	4148	.	+	.	ID=gene-AC56_RS02750;Name=yihV;gbkey=Gene;gene=yihV;gene_biotype=protein_coding;locus_tag=AC56_RS02750;old_locus_tag=AC56_4332
NZ_JJLS01000287.1	Protein Homology	CDS	3252	4148	.	+	0	ID=cds-WP_001461830.1;Parent=gene-AC56_RS02750;Dbxref=GenBank:WP_001461830.1;Name=WP_001461830.1;gbkey=CDS;gene=yihV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418319.2;locus_tag=AC56_RS02750;product=sulfofructose kinase;protein_id=WP_001461830.1;transl_table=11
NZ_JJLS01000287.1	RefSeq	gene	4182	4967	.	+	.	ID=gene-AC56_RS02745;Name=csqR;gbkey=Gene;gene=csqR;gene_biotype=protein_coding;locus_tag=AC56_RS02745;old_locus_tag=AC56_4333
NZ_JJLS01000287.1	Protein Homology	CDS	4182	4967	.	+	0	ID=cds-WP_000059678.1;Parent=gene-AC56_RS02745;Dbxref=GenBank:WP_000059678.1;Name=WP_000059678.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=csqR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418320.2;locus_tag=AC56_RS02745;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000059678.1;transl_table=11
NZ_JJLS01000287.1	RefSeq	gene	5066	5665	.	+	.	ID=gene-AC56_RS02740;Name=yihX;gbkey=Gene;gene=yihX;gene_biotype=protein_coding;locus_tag=AC56_RS02740;old_locus_tag=AC56_4334
NZ_JJLS01000287.1	Protein Homology	CDS	5066	5665	.	+	0	ID=cds-WP_001295269.1;Parent=gene-AC56_RS02740;Dbxref=GenBank:WP_001295269.1;Name=WP_001295269.1;gbkey=CDS;gene=yihX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709685.2;locus_tag=AC56_RS02740;product=glucose-1-phosphatase;protein_id=WP_001295269.1;transl_table=11
NZ_JJLS01000287.1	RefSeq	gene	5659	6531	.	+	.	ID=gene-AC56_RS02735;Name=yihY;gbkey=Gene;gene=yihY;gene_biotype=protein_coding;locus_tag=AC56_RS02735;old_locus_tag=AC56_4335
NZ_JJLS01000287.1	Protein Homology	CDS	5659	6531	.	+	0	ID=cds-WP_000920762.1;Parent=gene-AC56_RS02735;Dbxref=GenBank:WP_000920762.1;Name=WP_000920762.1;gbkey=CDS;gene=yihY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312836.1;locus_tag=AC56_RS02735;product=virulence factor BrkB family protein;protein_id=WP_000920762.1;transl_table=11
NZ_JJLS01000287.1	RefSeq	gene	6528	6965	.	+	.	ID=gene-AC56_RS02730;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=AC56_RS02730;old_locus_tag=AC56_4336
NZ_JJLS01000287.1	Protein Homology	CDS	6528	6965	.	+	0	ID=cds-WP_000560983.1;Parent=gene-AC56_RS02730;Dbxref=GenBank:WP_000560983.1;Name=WP_000560983.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560980.1;locus_tag=AC56_RS02730;product=D-aminoacyl-tRNA deacylase;protein_id=WP_000560983.1;transl_table=11
NZ_JJLS01000287.1	RefSeq	gene	7010	7951	.	+	.	ID=gene-AC56_RS02725;Name=fabY;gbkey=Gene;gene=fabY;gene_biotype=protein_coding;gene_synonym=yiiD;locus_tag=AC56_RS02725;old_locus_tag=AC56_4337
NZ_JJLS01000287.1	Protein Homology	CDS	7010	7951	.	+	0	ID=cds-WP_001297068.1;Parent=gene-AC56_RS02725;Dbxref=GenBank:WP_001297068.1;Name=WP_001297068.1;gbkey=CDS;gene=fabY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666856.1;locus_tag=AC56_RS02725;product=fatty acid biosynthesis protein FabY;protein_id=WP_001297068.1;transl_table=11
NZ_JJLS01000287.1	RefSeq	pseudogene	8311	8427	.	+	.	ID=gene-AC56_RS33970;Name=AC56_RS33970;end_range=8427,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33970;partial=true;pseudo=true
NZ_JJLS01000287.1	Protein Homology	CDS	8311	8427	.	+	0	ID=cds-AC56_RS33970;Parent=gene-AC56_RS33970;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=8427,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010904967.1;locus_tag=AC56_RS33970;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_JJLS01000287.1	RefSeq	gene	8804	9022	.	+	.	ID=gene-AC56_RS02720;Name=yiiE;gbkey=Gene;gene=yiiE;gene_biotype=protein_coding;locus_tag=AC56_RS02720;old_locus_tag=AC56_4338
NZ_JJLS01000287.1	Protein Homology	CDS	8804	9022	.	+	0	ID=cds-WP_001295676.1;Parent=gene-AC56_RS02720;Dbxref=GenBank:WP_001295676.1;Name=WP_001295676.1;Ontology_term=GO:0006276,GO:0006355,GO:0032993;gbkey=CDS;gene=yiiE;go_component=protein-DNA complex|0032993||IEA;go_process=plasmid maintenance|0006276||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312842.3;locus_tag=AC56_RS02720;product=CopG family transcriptional regulator;protein_id=WP_001295676.1;transl_table=11
NZ_JJLS01000287.1	RefSeq	gene	9240	9482	.	+	.	ID=gene-AC56_RS02715;Name=yiiF;gbkey=Gene;gene=yiiF;gene_biotype=protein_coding;locus_tag=AC56_RS02715;old_locus_tag=AC56_4339
NZ_JJLS01000287.1	Protein Homology	CDS	9240	9482	.	+	0	ID=cds-WP_001086388.1;Parent=gene-AC56_RS02715;Dbxref=GenBank:WP_001086388.1;Name=WP_001086388.1;gbkey=CDS;gene=yiiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709694.2;locus_tag=AC56_RS02715;product=protein YiiF;protein_id=WP_001086388.1;transl_table=11
NZ_JJLS01000287.1	RefSeq	gene	9812	10741	.	-	.	ID=gene-AC56_RS02710;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=AC56_RS02710;old_locus_tag=AC56_4340
NZ_JJLS01000287.1	Protein Homology	CDS	9812	10741	.	-	0	ID=cds-WP_032279221.1;Parent=gene-AC56_RS02710;Dbxref=GenBank:WP_032279221.1;Name=WP_032279221.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121819.1;locus_tag=AC56_RS02710;product=formate dehydrogenase accessory protein FdhE;protein_id=WP_032279221.1;transl_table=11
NZ_JJLS01000287.1	RefSeq	gene	10738	11373	.	-	.	ID=gene-AC56_RS02705;Name=fdoI;gbkey=Gene;gene=fdoI;gene_biotype=protein_coding;locus_tag=AC56_RS02705;old_locus_tag=AC56_4341
NZ_JJLS01000287.1	Protein Homology	CDS	10738	11373	.	-	0	ID=cds-WP_000829013.1;Parent=gene-AC56_RS02705;Dbxref=GenBank:WP_000829013.1;Name=WP_000829013.1;gbkey=CDS;gene=fdoI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312845.1;locus_tag=AC56_RS02705;product=formate dehydrogenase cytochrome b556 subunit;protein_id=WP_000829013.1;transl_table=11
NZ_JJLS01000287.1	RefSeq	gene	11370	12272	.	-	.	ID=gene-AC56_RS02700;Name=fdoH;gbkey=Gene;gene=fdoH;gene_biotype=protein_coding;locus_tag=AC56_RS02700;old_locus_tag=AC56_4342
NZ_JJLS01000287.1	Protein Homology	CDS	11370	12272	.	-	0	ID=cds-WP_032282922.1;Parent=gene-AC56_RS02700;Dbxref=GenBank:WP_032282922.1;Name=WP_032282922.1;gbkey=CDS;gene=fdoH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418329.1;locus_tag=AC56_RS02700;product=formate dehydrogenase O subunit beta;protein_id=WP_032282922.1;transl_table=11
NZ_JJLS01000287.1	RefSeq	gene	12285	15335	.	-	.	ID=gene-AC56_RS02695;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=AC56_RS02695;old_locus_tag=AC56_4343
NZ_JJLS01000287.1	Protein Homology	CDS	12285	15335	.	-	0	ID=cds-WP_010723259.1;Parent=gene-AC56_RS02695;Dbxref=GenBank:WP_010723259.1;Name=WP_010723259.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418330.1;locus_tag=AC56_RS02695;product=formate dehydrogenase-N subunit alpha;protein_id=WP_010723259.1;transl_except=(pos:complement(14748..14750)%2Caa:Sec);transl_table=11
NZ_JJLS01000287.1	RefSeq	gene	15529	16362	.	+	.	ID=gene-AC56_RS02685;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=AC56_RS02685;old_locus_tag=AC56_4346
NZ_JJLS01000287.1	Protein Homology	CDS	15529	16362	.	+	0	ID=cds-WP_000753617.1;Parent=gene-AC56_RS02685;Dbxref=GenBank:WP_000753617.1;Name=WP_000753617.1;Ontology_term=GO:0009061,GO:0015942,GO:0016783,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=sulfurtransferase activity|0016783||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418331.1;locus_tag=AC56_RS02685;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_000753617.1;transl_table=11
NZ_JJLS01000287.1	RefSeq	pseudogene	16515	17255	.	+	.	ID=gene-AC56_RS02680;Name=AC56_RS02680;end_range=17255,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS02680;old_locus_tag=AC56_4347;partial=true;pseudo=true
NZ_JJLS01000287.1	Protein Homology	CDS	16515	17255	.	+	0	ID=cds-AC56_RS02680;Parent=gene-AC56_RS02680;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=17255,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418332.1;locus_tag=AC56_RS02680;partial=true;product=YiiG family protein;pseudo=true;transl_table=11
NZ_JJLS01000287.1	RefSeq	pseudogene	17309	17711	.	+	.	ID=gene-AC56_RS0127365;Name=AC56_RS0127365;end_range=17711,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0127365;partial=true;pseudo=true
NZ_JJLS01000287.1	Protein Homology	CDS	17309	17711	.	+	0	ID=cds-AC56_RS0127365;Parent=gene-AC56_RS0127365;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=17711,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS0127365;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000288.1 1 28314
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000288.1	RefSeq	region	1	28314	.	+	.	ID=NZ_JJLS01000288.1:1..28314;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000288.1	RefSeq	gene	1	458	.	+	.	ID=gene-AC56_RS02675;Name=AC56_RS02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS02675;old_locus_tag=AC56_4349;partial=true;start_range=.,1
NZ_JJLS01000288.1	Protein Homology	CDS	1	458	.	+	2	ID=cds-WP_032282925.1;Parent=gene-AC56_RS02675;Dbxref=GenBank:WP_032282925.1;Name=WP_032282925.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014654019.1;locus_tag=AC56_RS02675;partial=true;product=IS1 family transposase;protein_id=WP_032282925.1;start_range=.,1;transl_table=11
NZ_JJLS01000288.1	RefSeq	pseudogene	470	1744	.	-	.	ID=gene-AC56_RS02670;Name=AC56_RS02670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS02670;old_locus_tag=AC56_4350;partial=true;pseudo=true;start_range=.,470
NZ_JJLS01000288.1	Protein Homology	CDS	470	1744	.	-	0	ID=cds-AC56_RS02670;Parent=gene-AC56_RS02670;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418333.1;locus_tag=AC56_RS02670;partial=true;product=putative frv operon regulatory protein;pseudo=true;start_range=.,470;transl_table=11
NZ_JJLS01000288.1	RefSeq	gene	1744	2814	.	-	.	ID=gene-AC56_RS02665;Name=frvX;gbkey=Gene;gene=frvX;gene_biotype=protein_coding;locus_tag=AC56_RS02665;old_locus_tag=AC56_4351
NZ_JJLS01000288.1	Protein Homology	CDS	1744	2814	.	-	0	ID=cds-WP_032279223.1;Parent=gene-AC56_RS02665;Dbxref=GenBank:WP_032279223.1;Name=WP_032279223.1;gbkey=CDS;gene=frvX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418334.1;locus_tag=AC56_RS02665;product=aminopeptidase;protein_id=WP_032279223.1;transl_table=11
NZ_JJLS01000288.1	RefSeq	gene	2804	4255	.	-	.	ID=gene-AC56_RS02660;Name=frvB;gbkey=Gene;gene=frvB;gene_biotype=protein_coding;locus_tag=AC56_RS02660;old_locus_tag=AC56_4352
NZ_JJLS01000288.1	Protein Homology	CDS	2804	4255	.	-	0	ID=cds-WP_032279224.1;Parent=gene-AC56_RS02660;Dbxref=GenBank:WP_032279224.1;Name=WP_032279224.1;gbkey=CDS;gene=frvB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418335.4;locus_tag=AC56_RS02660;product=PTS fructose-like transporter subunit IIBC;protein_id=WP_032279224.1;transl_table=11
NZ_JJLS01000288.1	RefSeq	gene	4266	4712	.	-	.	ID=gene-AC56_RS02655;Name=frvA;gbkey=Gene;gene=frvA;gene_biotype=protein_coding;locus_tag=AC56_RS02655;old_locus_tag=AC56_4353
NZ_JJLS01000288.1	Protein Homology	CDS	4266	4712	.	-	0	ID=cds-WP_000729595.1;Parent=gene-AC56_RS02655;Dbxref=GenBank:WP_000729595.1;Name=WP_000729595.1;gbkey=CDS;gene=frvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418336.1;locus_tag=AC56_RS02655;product=PTS fructose transporter subunit IIA;protein_id=WP_000729595.1;transl_table=11
NZ_JJLS01000288.1	RefSeq	gene	5013	5327	.	-	.	ID=gene-AC56_RS02650;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=protein_coding;locus_tag=AC56_RS02650;old_locus_tag=AC56_4354
NZ_JJLS01000288.1	Protein Homology	CDS	5013	5327	.	-	0	ID=cds-WP_001411948.1;Parent=gene-AC56_RS02650;Dbxref=GenBank:WP_001411948.1;Name=WP_001411948.1;Ontology_term=GO:0019299,GO:0016857,GO:0062192,GO:0005737;gbkey=CDS;gene=rhaM;go_component=cytoplasm|0005737||IEA;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA,L-rhamnose mutarotase activity|0062192||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709705.1;locus_tag=AC56_RS02650;product=L-rhamnose mutarotase;protein_id=WP_001411948.1;transl_table=11
NZ_JJLS01000288.1	RefSeq	gene	5337	6161	.	-	.	ID=gene-AC56_RS02645;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=protein_coding;locus_tag=AC56_RS02645;old_locus_tag=AC56_4355
NZ_JJLS01000288.1	Protein Homology	CDS	5337	6161	.	-	0	ID=cds-WP_001411949.1;Parent=gene-AC56_RS02645;Dbxref=GenBank:WP_001411949.1;Name=WP_001411949.1;gbkey=CDS;gene=rhaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418338.1;locus_tag=AC56_RS02645;product=rhamnulose-1-phosphate aldolase;protein_id=WP_001411949.1;transl_table=11
NZ_JJLS01000288.1	RefSeq	gene	6244	7503	.	-	.	ID=gene-AC56_RS02640;Name=rhaA;gbkey=Gene;gene=rhaA;gene_biotype=protein_coding;locus_tag=AC56_RS02640;old_locus_tag=AC56_4356
NZ_JJLS01000288.1	Protein Homology	CDS	6244	7503	.	-	0	ID=cds-WP_004019365.1;Parent=gene-AC56_RS02640;Dbxref=GenBank:WP_004019365.1;Name=WP_004019365.1;Ontology_term=GO:0019299,GO:0008740,GO:0030145;gbkey=CDS;gene=rhaA;go_function=L-rhamnose isomerase activity|0008740||IEA,manganese ion binding|0030145||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026276.1;locus_tag=AC56_RS02640;product=L-rhamnose isomerase;protein_id=WP_004019365.1;transl_table=11
NZ_JJLS01000288.1	RefSeq	gene	7500	8969	.	-	.	ID=gene-AC56_RS02635;Name=rhaB;gbkey=Gene;gene=rhaB;gene_biotype=protein_coding;locus_tag=AC56_RS02635;old_locus_tag=AC56_4357
NZ_JJLS01000288.1	Protein Homology	CDS	7500	8969	.	-	0	ID=cds-WP_000144042.1;Parent=gene-AC56_RS02635;Dbxref=GenBank:WP_000144042.1;Name=WP_000144042.1;Ontology_term=GO:0005975,GO:0019301,GO:0008993;gbkey=CDS;gene=rhaB;go_function=rhamnulokinase activity|0008993||IEA;go_process=carbohydrate metabolic process|0005975||IEA,rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312858.1;locus_tag=AC56_RS02635;product=rhamnulokinase;protein_id=WP_000144042.1;transl_table=11
NZ_JJLS01000288.1	RefSeq	gene	9048	9197	.	+	.	ID=gene-AC56_RS33020;Name=AC56_RS33020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33020;old_locus_tag=AC56_4358
NZ_JJLS01000288.1	Protein Homology	CDS	9048	9197	.	+	0	ID=cds-WP_000510367.1;Parent=gene-AC56_RS33020;Dbxref=GenBank:WP_000510367.1;Name=WP_000510367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000510376.1;locus_tag=AC56_RS33020;product=hypothetical protein;protein_id=WP_000510367.1;transl_table=11
NZ_JJLS01000288.1	RefSeq	gene	9257	10093	.	+	.	ID=gene-AC56_RS02625;Name=rhaS;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;locus_tag=AC56_RS02625;old_locus_tag=AC56_4360
NZ_JJLS01000288.1	Protein Homology	CDS	9257	10093	.	+	0	ID=cds-WP_000217137.1;Parent=gene-AC56_RS02625;Dbxref=GenBank:WP_000217137.1;Name=WP_000217137.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418341.1;locus_tag=AC56_RS02625;product=HTH-type transcriptional activator RhaS;protein_id=WP_000217137.1;transl_table=11
NZ_JJLS01000288.1	RefSeq	gene	10167	11015	.	+	.	ID=gene-AC56_RS02620;Name=rhaR;gbkey=Gene;gene=rhaR;gene_biotype=protein_coding;locus_tag=AC56_RS02620;old_locus_tag=AC56_4361
NZ_JJLS01000288.1	Protein Homology	CDS	10167	11015	.	+	0	ID=cds-WP_001336056.1;Parent=gene-AC56_RS02620;Dbxref=GenBank:WP_001336056.1;Name=WP_001336056.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418342.2;locus_tag=AC56_RS02620;product=HTH-type transcriptional activator RhaR;protein_id=WP_001336056.1;transl_table=11
NZ_JJLS01000288.1	RefSeq	gene	11012	12046	.	-	.	ID=gene-AC56_RS02615;Name=rhaT;gbkey=Gene;gene=rhaT;gene_biotype=protein_coding;locus_tag=AC56_RS02615;old_locus_tag=AC56_4362
NZ_JJLS01000288.1	Protein Homology	CDS	11012	12046	.	-	0	ID=cds-WP_032177701.1;Parent=gene-AC56_RS02615;Dbxref=GenBank:WP_032177701.1;Name=WP_032177701.1;Ontology_term=GO:0008645,GO:0015153;gbkey=CDS;gene=rhaT;go_function=rhamnose transmembrane transporter activity|0015153||IEA;go_process=hexose transmembrane transport|0008645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418343.1;locus_tag=AC56_RS02615;product=L-rhamnose/proton symporter RhaT;protein_id=WP_032177701.1;transl_table=11
NZ_JJLS01000288.1	RefSeq	gene	12331	12951	.	+	.	ID=gene-AC56_RS02610;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=AC56_RS02610;old_locus_tag=AC56_4363
NZ_JJLS01000288.1	Protein Homology	CDS	12331	12951	.	+	0	ID=cds-WP_032279231.1;Parent=gene-AC56_RS02610;Dbxref=GenBank:WP_032279231.1;Name=WP_032279231.1;Ontology_term=GO:0006801,GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010345169.1;locus_tag=AC56_RS02610;product=superoxide dismutase [Mn];protein_id=WP_032279231.1;transl_table=11
NZ_JJLS01000288.1	RefSeq	gene	13211	14194	.	+	.	ID=gene-AC56_RS02600;Name=kdgT;gbkey=Gene;gene=kdgT;gene_biotype=protein_coding;locus_tag=AC56_RS02600;old_locus_tag=AC56_4365
NZ_JJLS01000288.1	Protein Homology	CDS	13211	14194	.	+	0	ID=cds-WP_032282926.1;Parent=gene-AC56_RS02600;Dbxref=GenBank:WP_032282926.1;Name=WP_032282926.1;Ontology_term=GO:0046411,GO:0015649,GO:0016020;gbkey=CDS;gene=kdgT;go_component=membrane|0016020||IEA;go_function=2-keto-3-deoxygluconate:proton symporter activity|0015649||IEA;go_process=2-keto-3-deoxygluconate transmembrane transport|0046411||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709713.2;locus_tag=AC56_RS02600;product=2-keto-3-deoxygluconate transporter;protein_id=WP_032282926.1;transl_table=11
NZ_JJLS01000288.1	RefSeq	gene	14343	15017	.	+	.	ID=gene-AC56_RS02595;Name=yiiM;gbkey=Gene;gene=yiiM;gene_biotype=protein_coding;locus_tag=AC56_RS02595;old_locus_tag=AC56_4366
NZ_JJLS01000288.1	Protein Homology	CDS	14343	15017	.	+	0	ID=cds-WP_032279225.1;Parent=gene-AC56_RS02595;Dbxref=GenBank:WP_032279225.1;Name=WP_032279225.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;gene=yiiM;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418346.2;locus_tag=AC56_RS02595;product=6-hydroxyaminopurine reductase;protein_id=WP_032279225.1;transl_table=11
NZ_JJLS01000288.1	RefSeq	gene	15123	16496	.	-	.	ID=gene-AC56_RS02590;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=AC56_RS02590;old_locus_tag=AC56_4367
NZ_JJLS01000288.1	Protein Homology	CDS	15123	16496	.	-	0	ID=cds-WP_000580424.1;Parent=gene-AC56_RS02590;Dbxref=GenBank:WP_000580424.1;Name=WP_000580424.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=cpxA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312864.1;locus_tag=AC56_RS02590;product=envelope stress sensor histidine kinase CpxA;protein_id=WP_000580424.1;transl_table=11
NZ_JJLS01000288.1	RefSeq	gene	16493	17191	.	-	.	ID=gene-AC56_RS02585;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;locus_tag=AC56_RS02585;old_locus_tag=AC56_4368
NZ_JJLS01000288.1	Protein Homology	CDS	16493	17191	.	-	0	ID=cds-WP_001033722.1;Parent=gene-AC56_RS02585;Dbxref=GenBank:WP_001033722.1;Name=WP_001033722.1;gbkey=CDS;gene=cpxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033718.1;locus_tag=AC56_RS02585;product=envelope stress response regulator transcription factor CpxR;protein_id=WP_001033722.1;transl_table=11
NZ_JJLS01000288.1	RefSeq	gene	17341	17841	.	+	.	ID=gene-AC56_RS02580;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=AC56_RS02580;old_locus_tag=AC56_4369
NZ_JJLS01000288.1	Protein Homology	CDS	17341	17841	.	+	0	ID=cds-WP_001354478.1;Parent=gene-AC56_RS02580;Dbxref=GenBank:WP_001354478.1;Name=WP_001354478.1;gbkey=CDS;gene=cpxP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026277.1;locus_tag=AC56_RS02580;product=cell-envelope stress modulator CpxP;protein_id=WP_001354478.1;transl_table=11
NZ_JJLS01000288.1	RefSeq	gene	17990	18892	.	+	.	ID=gene-AC56_RS02575;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;locus_tag=AC56_RS02575;old_locus_tag=AC56_4370
NZ_JJLS01000288.1	Protein Homology	CDS	17990	18892	.	+	0	ID=cds-WP_001076748.1;Parent=gene-AC56_RS02575;Dbxref=GenBank:WP_001076748.1;Name=WP_001076748.1;Note=FieF%2C a metal efflux transporter%2C is a member of the CDF (cation diffusion facilitator) family of transporters.;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;gene=fieF;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709720.2;locus_tag=AC56_RS02575;product=CDF family cation-efflux transporter FieF;protein_id=WP_001076748.1;transl_table=11
NZ_JJLS01000288.1	RefSeq	gene	19073	20035	.	+	.	ID=gene-AC56_RS02570;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=AC56_RS02570;old_locus_tag=AC56_4371
NZ_JJLS01000288.1	Protein Homology	CDS	19073	20035	.	+	0	ID=cds-WP_032279226.1;Parent=gene-AC56_RS02570;Dbxref=GenBank:WP_032279226.1;Name=WP_032279226.1;Ontology_term=GO:0006002,GO:0006096,GO:0005524;gbkey=CDS;gene=pfkA;go_function=ATP binding|0005524||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072359.1;locus_tag=AC56_RS02570;product=6-phosphofructokinase;protein_id=WP_032279226.1;transl_table=11
NZ_JJLS01000288.1	RefSeq	gene	20355	21344	.	+	.	ID=gene-AC56_RS02565;Name=sbp;gbkey=Gene;gene=sbp;gene_biotype=protein_coding;locus_tag=AC56_RS02565;old_locus_tag=AC56_4372
NZ_JJLS01000288.1	Protein Homology	CDS	20355	21344	.	+	0	ID=cds-WP_032279227.1;Parent=gene-AC56_RS02565;Dbxref=GenBank:WP_032279227.1;Name=WP_032279227.1;gbkey=CDS;gene=sbp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133064.1;locus_tag=AC56_RS02565;product=sulfate/thiosulfate ABC transporter substrate-binding protein Sbp;protein_id=WP_032279227.1;transl_table=11
NZ_JJLS01000288.1	RefSeq	gene	21451	22206	.	+	.	ID=gene-AC56_RS02560;Name=cdh;gbkey=Gene;gene=cdh;gene_biotype=protein_coding;locus_tag=AC56_RS02560;old_locus_tag=AC56_4373
NZ_JJLS01000288.1	Protein Homology	CDS	21451	22206	.	+	0	ID=cds-WP_000708998.1;Parent=gene-AC56_RS02560;Dbxref=GenBank:WP_000708998.1;Name=WP_000708998.1;Ontology_term=GO:0008654,GO:0008715,GO:0016020;gbkey=CDS;gene=cdh;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol diphosphatase activity|0008715||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312870.1;locus_tag=AC56_RS02560;product=CDP-diacylglycerol diphosphatase;protein_id=WP_000708998.1;transl_table=11
NZ_JJLS01000288.1	RefSeq	gene	22261	23028	.	-	.	ID=gene-AC56_RS02555;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=AC56_RS02555;old_locus_tag=AC56_4374
NZ_JJLS01000288.1	Protein Homology	CDS	22261	23028	.	-	0	ID=cds-WP_001216325.1;Parent=gene-AC56_RS02555;Dbxref=GenBank:WP_001216325.1;Name=WP_001216325.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312871.1;locus_tag=AC56_RS02555;product=triose-phosphate isomerase;protein_id=WP_001216325.1;transl_table=11
NZ_JJLS01000288.1	RefSeq	gene	23136	23735	.	-	.	ID=gene-AC56_RS02550;Name=yiiQ;gbkey=Gene;gene=yiiQ;gene_biotype=protein_coding;locus_tag=AC56_RS02550;old_locus_tag=AC56_4375
NZ_JJLS01000288.1	Protein Homology	CDS	23136	23735	.	-	0	ID=cds-WP_000802226.1;Parent=gene-AC56_RS02550;Dbxref=GenBank:WP_000802226.1;Name=WP_000802226.1;gbkey=CDS;gene=yiiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312872.1;locus_tag=AC56_RS02550;product=YiiQ family protein;protein_id=WP_000802226.1;transl_table=11
NZ_JJLS01000288.1	RefSeq	gene	23836	24276	.	+	.	ID=gene-AC56_RS02545;Name=yiiR;gbkey=Gene;gene=yiiR;gene_biotype=protein_coding;locus_tag=AC56_RS02545;old_locus_tag=AC56_4376
NZ_JJLS01000288.1	Protein Homology	CDS	23836	24276	.	+	0	ID=cds-WP_000155257.1;Parent=gene-AC56_RS02545;Dbxref=GenBank:WP_000155257.1;Name=WP_000155257.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yiiR;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312873.1;locus_tag=AC56_RS02545;product=DUF805 domain-containing protein;protein_id=WP_000155257.1;transl_table=11
NZ_JJLS01000288.1	RefSeq	gene	24488	24787	.	+	.	ID=gene-AC56_RS02540;Name=yiiS;gbkey=Gene;gene=yiiS;gene_biotype=protein_coding;locus_tag=AC56_RS02540;old_locus_tag=AC56_4377
NZ_JJLS01000288.1	Protein Homology	CDS	24488	24787	.	+	0	ID=cds-WP_000655989.1;Parent=gene-AC56_RS02540;Dbxref=GenBank:WP_000655989.1;Name=WP_000655989.1;gbkey=CDS;gene=yiiS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418357.1;locus_tag=AC56_RS02540;product=DUF406 domain-containing protein;protein_id=WP_000655989.1;transl_table=11
NZ_JJLS01000288.1	RefSeq	gene	24814	25242	.	+	.	ID=gene-AC56_RS02535;Name=uspD;gbkey=Gene;gene=uspD;gene_biotype=protein_coding;locus_tag=AC56_RS02535;old_locus_tag=AC56_4378
NZ_JJLS01000288.1	Protein Homology	CDS	24814	25242	.	+	0	ID=cds-WP_000323556.1;Parent=gene-AC56_RS02535;Dbxref=GenBank:WP_000323556.1;Name=WP_000323556.1;gbkey=CDS;gene=uspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418358.1;locus_tag=AC56_RS02535;product=universal stress protein UspD;protein_id=WP_000323556.1;transl_table=11
NZ_JJLS01000288.1	RefSeq	gene	25247	25993	.	-	.	ID=gene-AC56_RS02530;Name=fpr;gbkey=Gene;gene=fpr;gene_biotype=protein_coding;locus_tag=AC56_RS02530;old_locus_tag=AC56_4379
NZ_JJLS01000288.1	Protein Homology	CDS	25247	25993	.	-	0	ID=cds-WP_000796332.1;Parent=gene-AC56_RS02530;Dbxref=GenBank:WP_000796332.1;Name=WP_000796332.1;Ontology_term=GO:0004324;gbkey=CDS;gene=fpr;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418359.1;locus_tag=AC56_RS02530;product=ferredoxin--NADP(+) reductase;protein_id=WP_000796332.1;transl_table=11
NZ_JJLS01000288.1	RefSeq	gene	26090	27100	.	-	.	ID=gene-AC56_RS02525;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=AC56_RS02525;old_locus_tag=AC56_4380
NZ_JJLS01000288.1	Protein Homology	CDS	26090	27100	.	-	0	ID=cds-WP_001250644.1;Parent=gene-AC56_RS02525;Dbxref=GenBank:WP_001250644.1;Name=WP_001250644.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418360.1;locus_tag=AC56_RS02525;product=class II fructose-bisphosphatase;protein_id=WP_001250644.1;transl_table=11
NZ_JJLS01000288.1	RefSeq	gene	27354	28314	.	-	.	ID=gene-AC56_RS02520;Name=AC56_RS02520;end_range=28314,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS02520;old_locus_tag=AC56_4381;partial=true
NZ_JJLS01000288.1	Protein Homology	CDS	27354	28314	.	-	1	ID=cds-WP_032282478.1-15;Parent=gene-AC56_RS02520;Dbxref=GenBank:WP_032282478.1;Name=WP_032282478.1;Ontology_term=GO:0006313,GO:0004803;end_range=28314,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS02520;partial=true;product=IS4-like element IS421 family transposase;protein_id=WP_032282478.1;transl_table=11
##sequence-region NZ_JJLS01000289.1 1 52040
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000289.1	RefSeq	region	1	52040	.	+	.	ID=NZ_JJLS01000289.1:1..52040;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000289.1	RefSeq	pseudogene	1	316	.	-	.	ID=gene-AC56_RS02515;Name=AC56_RS02515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS02515;old_locus_tag=AC56_4382;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000289.1	Protein Homology	CDS	1	316	.	-	0	ID=cds-AC56_RS02515;Parent=gene-AC56_RS02515;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS02515;partial=true;product=IS4 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000289.1	RefSeq	gene	434	1942	.	-	.	ID=gene-AC56_RS02510;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=AC56_RS02510;old_locus_tag=AC56_4383
NZ_JJLS01000289.1	Protein Homology	CDS	434	1942	.	-	0	ID=cds-WP_000136788.1;Parent=gene-AC56_RS02510;Dbxref=GenBank:WP_000136788.1;Name=WP_000136788.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312878.1;locus_tag=AC56_RS02510;product=glycerol kinase GlpK;protein_id=WP_000136788.1;transl_table=11
NZ_JJLS01000289.1	RefSeq	gene	1965	2810	.	-	.	ID=gene-AC56_RS02505;Name=glpF;gbkey=Gene;gene=glpF;gene_biotype=protein_coding;locus_tag=AC56_RS02505;old_locus_tag=AC56_4384
NZ_JJLS01000289.1	Protein Homology	CDS	1965	2810	.	-	0	ID=cds-WP_000084268.1;Parent=gene-AC56_RS02505;Dbxref=GenBank:WP_000084268.1;Name=WP_000084268.1;gbkey=CDS;gene=glpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312879.1;locus_tag=AC56_RS02505;product=glycerol uptake facilitator protein GlpF;protein_id=WP_000084268.1;transl_table=11
NZ_JJLS01000289.1	RefSeq	gene	3235	3480	.	+	.	ID=gene-AC56_RS02500;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=AC56_RS02500;old_locus_tag=AC56_4385
NZ_JJLS01000289.1	Protein Homology	CDS	3235	3480	.	+	0	ID=cds-WP_001296623.1;Parent=gene-AC56_RS02500;Dbxref=GenBank:WP_001296623.1;Name=WP_001296623.1;gbkey=CDS;gene=zapB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418363.1;locus_tag=AC56_RS02500;product=septal ring assembly protein ZapB;protein_id=WP_001296623.1;transl_table=11
NZ_JJLS01000289.1	RefSeq	gene	3565	4050	.	-	.	ID=gene-AC56_RS02495;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=AC56_RS02495;old_locus_tag=AC56_4386
NZ_JJLS01000289.1	Protein Homology	CDS	3565	4050	.	-	0	ID=cds-WP_000872908.1;Parent=gene-AC56_RS02495;Dbxref=GenBank:WP_000872908.1;Name=WP_000872908.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1;locus_tag=AC56_RS02495;product=ribonuclease E activity regulator RraA;protein_id=WP_000872908.1;transl_table=11
NZ_JJLS01000289.1	RefSeq	gene	4143	5069	.	-	.	ID=gene-AC56_RS02490;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=AC56_RS02490;old_locus_tag=AC56_4387
NZ_JJLS01000289.1	Protein Homology	CDS	4143	5069	.	-	0	ID=cds-WP_000139496.1;Parent=gene-AC56_RS02490;Dbxref=GenBank:WP_000139496.1;Name=WP_000139496.1;gbkey=CDS;gene=menA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418365.1;locus_tag=AC56_RS02490;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_000139496.1;transl_table=11
NZ_JJLS01000289.1	RefSeq	gene	5136	6467	.	-	.	ID=gene-AC56_RS02485;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=AC56_RS02485;old_locus_tag=AC56_4388
NZ_JJLS01000289.1	Protein Homology	CDS	5136	6467	.	-	0	ID=cds-WP_001293341.1;Parent=gene-AC56_RS02485;Dbxref=GenBank:WP_001293341.1;Name=WP_001293341.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=AC56_RS02485;product=HslU--HslV peptidase ATPase subunit;protein_id=WP_001293341.1;transl_table=11
NZ_JJLS01000289.1	RefSeq	gene	6477	7007	.	-	.	ID=gene-AC56_RS02480;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=AC56_RS02480;old_locus_tag=AC56_4389
NZ_JJLS01000289.1	Protein Homology	CDS	6477	7007	.	-	0	ID=cds-WP_000208242.1;Parent=gene-AC56_RS02480;Dbxref=GenBank:WP_000208242.1;Name=WP_000208242.1;Ontology_term=GO:0051603,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312886.1;locus_tag=AC56_RS02480;product=ATP-dependent protease subunit HslV;protein_id=WP_000208242.1;transl_table=11
NZ_JJLS01000289.1	RefSeq	gene	7100	8059	.	-	.	ID=gene-AC56_RS02475;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=AC56_RS02475;old_locus_tag=AC56_4390
NZ_JJLS01000289.1	Protein Homology	CDS	7100	8059	.	-	0	ID=cds-WP_000068828.1;Parent=gene-AC56_RS02475;Dbxref=GenBank:WP_000068828.1;Name=WP_000068828.1;Ontology_term=GO:0042834;gbkey=CDS;gene=ftsN;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418368.1;locus_tag=AC56_RS02475;product=cell division protein FtsN;protein_id=WP_000068828.1;transl_table=11
NZ_JJLS01000289.1	RefSeq	gene	8151	9176	.	-	.	ID=gene-AC56_RS02470;Name=cytR;gbkey=Gene;gene=cytR;gene_biotype=protein_coding;locus_tag=AC56_RS02470;old_locus_tag=AC56_4391
NZ_JJLS01000289.1	Protein Homology	CDS	8151	9176	.	-	0	ID=cds-WP_000644904.1;Parent=gene-AC56_RS02470;Dbxref=GenBank:WP_000644904.1;Name=WP_000644904.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=cytR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312888.1;locus_tag=AC56_RS02470;product=DNA-binding transcriptional regulator CytR;protein_id=WP_000644904.1;transl_table=11
NZ_JJLS01000289.1	RefSeq	gene	9332	11530	.	-	.	ID=gene-AC56_RS02465;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=AC56_RS02465;old_locus_tag=AC56_4392
NZ_JJLS01000289.1	Protein Homology	CDS	9332	11530	.	-	0	ID=cds-WP_032279233.1;Parent=gene-AC56_RS02465;Dbxref=GenBank:WP_032279233.1;Name=WP_032279233.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418370.1;locus_tag=AC56_RS02465;product=primosomal protein N';protein_id=WP_032279233.1;transl_table=11
NZ_JJLS01000289.1	RefSeq	gene	11733	11945	.	+	.	ID=gene-AC56_RS02460;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=AC56_RS02460;old_locus_tag=AC56_4393
NZ_JJLS01000289.1	Protein Homology	CDS	11733	11945	.	+	0	ID=cds-WP_000710769.1;Parent=gene-AC56_RS02460;Dbxref=GenBank:WP_000710769.1;Name=WP_000710769.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312890.1;locus_tag=AC56_RS02460;product=50S ribosomal protein L31;protein_id=WP_000710769.1;transl_table=11
NZ_JJLS01000289.1	RefSeq	gene	12000	12623	.	-	.	ID=gene-AC56_RS02455;Name=AC56_RS02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS02455;old_locus_tag=AC56_4394
NZ_JJLS01000289.1	Protein Homology	CDS	12000	12623	.	-	0	ID=cds-WP_000720774.1;Parent=gene-AC56_RS02455;Dbxref=GenBank:WP_000720774.1;Name=WP_000720774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001402674.1;locus_tag=AC56_RS02455;product=TIGR02117 family protein;protein_id=WP_000720774.1;transl_table=11
NZ_JJLS01000289.1	RefSeq	gene	12630	13238	.	-	.	ID=gene-AC56_RS02450;Name=yiiX;gbkey=Gene;gene=yiiX;gene_biotype=protein_coding;locus_tag=AC56_RS02450;old_locus_tag=AC56_4395
NZ_JJLS01000289.1	Protein Homology	CDS	12630	13238	.	-	0	ID=cds-WP_000797341.1;Parent=gene-AC56_RS02450;Dbxref=GenBank:WP_000797341.1;Name=WP_000797341.1;gbkey=CDS;gene=yiiX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312893.1;locus_tag=AC56_RS02450;product=YiiX family permuted papain-like enzyme;protein_id=WP_000797341.1;transl_table=11
NZ_JJLS01000289.1	RefSeq	gene	13422	13739	.	-	.	ID=gene-AC56_RS02445;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=AC56_RS02445;old_locus_tag=AC56_4397
NZ_JJLS01000289.1	Protein Homology	CDS	13422	13739	.	-	0	ID=cds-WP_000852812.1;Parent=gene-AC56_RS02445;Dbxref=GenBank:WP_000852812.1;Name=WP_000852812.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1;locus_tag=AC56_RS02445;product=met regulon transcriptional regulator MetJ;protein_id=WP_000852812.1;transl_table=11
NZ_JJLS01000289.1	RefSeq	gene	14016	15176	.	+	.	ID=gene-AC56_RS02440;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=AC56_RS02440;old_locus_tag=AC56_4398
NZ_JJLS01000289.1	Protein Homology	CDS	14016	15176	.	+	0	ID=cds-WP_001295694.1;Parent=gene-AC56_RS02440;Dbxref=GenBank:WP_001295694.1;Name=WP_001295694.1;Ontology_term=GO:0019346,GO:0003824,GO:0030170;gbkey=CDS;gene=metB;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418374.1;locus_tag=AC56_RS02440;product=cystathionine gamma-synthase;protein_id=WP_001295694.1;transl_table=11
NZ_JJLS01000289.1	RefSeq	gene	15179	17611	.	+	.	ID=gene-AC56_RS02435;Name=metL;gbkey=Gene;gene=metL;gene_biotype=protein_coding;locus_tag=AC56_RS02435;old_locus_tag=AC56_4399
NZ_JJLS01000289.1	Protein Homology	CDS	15179	17611	.	+	0	ID=cds-WP_000110772.1;Parent=gene-AC56_RS02435;Dbxref=GenBank:WP_000110772.1;Name=WP_000110772.1;gbkey=CDS;gene=metL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110794.1;locus_tag=AC56_RS02435;product=bifunctional aspartate kinase/homoserine dehydrogenase II;protein_id=WP_000110772.1;transl_table=11
NZ_JJLS01000289.1	RefSeq	gene	17750	17974	.	-	.	ID=gene-AC56_RS33025;Name=AC56_RS33025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33025
NZ_JJLS01000289.1	GeneMarkS-2+	CDS	17750	17974	.	-	0	ID=cds-WP_124841249.1;Parent=gene-AC56_RS33025;Dbxref=GenBank:WP_124841249.1;Name=WP_124841249.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS33025;product=hypothetical protein;protein_id=WP_124841249.1;transl_table=11
NZ_JJLS01000289.1	RefSeq	gene	17960	18850	.	+	.	ID=gene-AC56_RS02425;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=AC56_RS02425;old_locus_tag=AC56_4401
NZ_JJLS01000289.1	Protein Homology	CDS	17960	18850	.	+	0	ID=cds-WP_000007523.1;Parent=gene-AC56_RS02425;Dbxref=GenBank:WP_000007523.1;Name=WP_000007523.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418376.1;locus_tag=AC56_RS02425;product=methylenetetrahydrofolate reductase;protein_id=WP_000007523.1;transl_table=11
NZ_JJLS01000289.1	RefSeq	gene	19179	21359	.	+	.	ID=gene-AC56_RS02420;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=AC56_RS02420;old_locus_tag=AC56_4402
NZ_JJLS01000289.1	Protein Homology	CDS	19179	21359	.	+	0	ID=cds-WP_001295695.1;Parent=gene-AC56_RS02420;Dbxref=GenBank:WP_001295695.1;Name=WP_001295695.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601,GO:0020037;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418377.1;locus_tag=AC56_RS02420;product=catalase/peroxidase HPI;protein_id=WP_001295695.1;transl_table=11
NZ_JJLS01000289.1	RefSeq	gene	21452	22357	.	+	.	ID=gene-AC56_RS02415;Name=yijE;gbkey=Gene;gene=yijE;gene_biotype=protein_coding;locus_tag=AC56_RS02415;old_locus_tag=AC56_4403
NZ_JJLS01000289.1	Protein Homology	CDS	21452	22357	.	+	0	ID=cds-WP_001411974.1;Parent=gene-AC56_RS02415;Dbxref=GenBank:WP_001411974.1;Name=WP_001411974.1;gbkey=CDS;gene=yijE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418378.4;locus_tag=AC56_RS02415;product=cystine transporter YijE;protein_id=WP_001411974.1;transl_table=11
NZ_JJLS01000289.1	RefSeq	gene	22384	23001	.	-	.	ID=gene-AC56_RS02410;Name=yijF;gbkey=Gene;gene=yijF;gene_biotype=protein_coding;locus_tag=AC56_RS02410;old_locus_tag=AC56_4404
NZ_JJLS01000289.1	Protein Homology	CDS	22384	23001	.	-	0	ID=cds-WP_032282928.1;Parent=gene-AC56_RS02410;Dbxref=GenBank:WP_032282928.1;Name=WP_032282928.1;gbkey=CDS;gene=yijF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418379.1;locus_tag=AC56_RS02410;product=DUF1287 domain-containing protein;protein_id=WP_032282928.1;transl_table=11
NZ_JJLS01000289.1	RefSeq	gene	23276	24379	.	-	.	ID=gene-AC56_RS02405;Name=gldA;gbkey=Gene;gene=gldA;gene_biotype=protein_coding;locus_tag=AC56_RS02405;old_locus_tag=AC56_4405
NZ_JJLS01000289.1	Protein Homology	CDS	23276	24379	.	-	0	ID=cds-WP_032279236.1;Parent=gene-AC56_RS02405;Dbxref=GenBank:WP_032279236.1;Name=WP_032279236.1;Ontology_term=GO:0019588,GO:0051596,GO:0008888,GO:0019147;gbkey=CDS;gene=gldA;go_function=glycerol dehydrogenase (NAD+) activity|0008888||IEA,(R)-aminopropanol dehydrogenase activity|0019147||IEA;go_process=anaerobic glycerol catabolic process|0019588||IEA,methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418380.4;locus_tag=AC56_RS02405;product=bifunctional L-1%2C2-propanediol dehydrogenase/glycerol dehydrogenase;protein_id=WP_032279236.1;transl_table=11
NZ_JJLS01000289.1	RefSeq	gene	24390	25052	.	-	.	ID=gene-AC56_RS02400;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=AC56_RS02400;old_locus_tag=AC56_4406
NZ_JJLS01000289.1	Protein Homology	CDS	24390	25052	.	-	0	ID=cds-WP_000424839.1;Parent=gene-AC56_RS02400;Dbxref=GenBank:WP_000424839.1;Name=WP_000424839.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418381.1;locus_tag=AC56_RS02400;product=fructose-6-phosphate aldolase;protein_id=WP_000424839.1;transl_table=11
NZ_JJLS01000289.1	RefSeq	gene	25064	27565	.	-	.	ID=gene-AC56_RS02395;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=AC56_RS02395;old_locus_tag=AC56_4407
NZ_JJLS01000289.1	Protein Homology	CDS	25064	27565	.	-	0	ID=cds-WP_032279237.1;Parent=gene-AC56_RS02395;Dbxref=GenBank:WP_032279237.1;Name=WP_032279237.1;Ontology_term=GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026278.1;locus_tag=AC56_RS02395;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_032279237.1;transl_table=11
NZ_JJLS01000289.1	RefSeq	gene	27874	28953	.	+	.	ID=gene-AC56_RS02390;Name=frwC;gbkey=Gene;gene=frwC;gene_biotype=protein_coding;locus_tag=AC56_RS02390;old_locus_tag=AC56_4408
NZ_JJLS01000289.1	Protein Homology	CDS	27874	28953	.	+	0	ID=cds-WP_032279238.1;Parent=gene-AC56_RS02390;Dbxref=GenBank:WP_032279238.1;Name=WP_032279238.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=frwC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418384.1;locus_tag=AC56_RS02390;product=PTS fructose transporter subunit EIIC;protein_id=WP_032279238.1;transl_table=11
NZ_JJLS01000289.1	RefSeq	gene	28968	29288	.	+	.	ID=gene-AC56_RS02385;Name=frwB;gbkey=Gene;gene=frwB;gene_biotype=protein_coding;locus_tag=AC56_RS02385;old_locus_tag=AC56_4409
NZ_JJLS01000289.1	Protein Homology	CDS	28968	29288	.	+	0	ID=cds-WP_000161265.1;Parent=gene-AC56_RS02385;Dbxref=GenBank:WP_000161265.1;Name=WP_000161265.1;Ontology_term=GO:0009401,GO:0022877;gbkey=CDS;gene=frwB;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312906.1;locus_tag=AC56_RS02385;product=PTS fructose-like transporter subunit IIB;protein_id=WP_000161265.1;transl_table=11
NZ_JJLS01000289.1	RefSeq	gene	29339	31636	.	+	.	ID=gene-AC56_RS02380;Name=pflD;gbkey=Gene;gene=pflD;gene_biotype=protein_coding;locus_tag=AC56_RS02380;old_locus_tag=AC56_4410
NZ_JJLS01000289.1	Protein Homology	CDS	29339	31636	.	+	0	ID=cds-WP_032279239.1;Parent=gene-AC56_RS02380;Dbxref=GenBank:WP_032279239.1;Name=WP_032279239.1;Ontology_term=GO:0003824;gbkey=CDS;gene=pflD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418386.1;locus_tag=AC56_RS02380;product=formate C-acetyltransferase;protein_id=WP_032279239.1;transl_table=11
NZ_JJLS01000289.1	RefSeq	pseudogene	31602	32479	.	+	.	ID=gene-AC56_RS0127375;Name=pflC;gbkey=Gene;gene=pflC;gene_biotype=pseudogene;locus_tag=AC56_RS0127375;pseudo=true
NZ_JJLS01000289.1	Protein Homology	CDS	31602	32479	.	+	0	ID=cds-AC56_RS0127375;Parent=gene-AC56_RS0127375;Note=frameshifted;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=pflC;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418387.3;locus_tag=AC56_RS0127375;product=[formate-C-acetyltransferase]-activating enzyme;pseudo=true;transl_table=11
NZ_JJLS01000289.1	RefSeq	gene	32481	32822	.	+	.	ID=gene-AC56_RS02375;Name=frwD;gbkey=Gene;gene=frwD;gene_biotype=protein_coding;locus_tag=AC56_RS02375;old_locus_tag=AC56_4413
NZ_JJLS01000289.1	Protein Homology	CDS	32481	32822	.	+	0	ID=cds-WP_000323846.1;Parent=gene-AC56_RS02375;Dbxref=GenBank:WP_000323846.1;Name=WP_000323846.1;gbkey=CDS;gene=frwD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418388.1;locus_tag=AC56_RS02375;product=PTS fructose-like transporter subunit IIB;protein_id=WP_000323846.1;transl_table=11
NZ_JJLS01000289.1	RefSeq	gene	32809	33660	.	-	.	ID=gene-AC56_RS02370;Name=yijO;gbkey=Gene;gene=yijO;gene_biotype=protein_coding;locus_tag=AC56_RS02370;old_locus_tag=AC56_4414
NZ_JJLS01000289.1	Protein Homology	CDS	32809	33660	.	-	0	ID=cds-WP_032279240.1;Parent=gene-AC56_RS02370;Dbxref=GenBank:WP_032279240.1;Name=WP_032279240.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=yijO;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709754.1;locus_tag=AC56_RS02370;product=helix-turn-helix transcriptional regulator;protein_id=WP_032279240.1;transl_table=11
NZ_JJLS01000289.1	RefSeq	gene	33875	35608	.	-	.	ID=gene-AC56_RS02365;Name=eptC;gbkey=Gene;gene=eptC;gene_biotype=protein_coding;locus_tag=AC56_RS02365;old_locus_tag=AC56_4415
NZ_JJLS01000289.1	Protein Homology	CDS	33875	35608	.	-	0	ID=cds-WP_000556295.1;Parent=gene-AC56_RS02365;Dbxref=GenBank:WP_000556295.1;Name=WP_000556295.1;gbkey=CDS;gene=eptC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709755.2;locus_tag=AC56_RS02365;product=phosphoethanolamine transferase CptA;protein_id=WP_000556295.1;transl_table=11
NZ_JJLS01000289.1	RefSeq	gene	35790	38441	.	-	.	ID=gene-AC56_RS02360;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=AC56_RS02360;old_locus_tag=AC56_4416
NZ_JJLS01000289.1	Protein Homology	CDS	35790	38441	.	-	0	ID=cds-WP_001388743.1;Parent=gene-AC56_RS02360;Dbxref=GenBank:WP_001388743.1;Name=WP_001388743.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203687.1;locus_tag=AC56_RS02360;product=phosphoenolpyruvate carboxylase;protein_id=WP_001388743.1;transl_table=11
NZ_JJLS01000289.1	RefSeq	gene	39162	40313	.	-	.	ID=gene-AC56_RS02355;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=AC56_RS02355;old_locus_tag=AC56_4417
NZ_JJLS01000289.1	Protein Homology	CDS	39162	40313	.	-	0	ID=cds-WP_032279241.1;Parent=gene-AC56_RS02355;Dbxref=GenBank:WP_032279241.1;Name=WP_032279241.1;Ontology_term=GO:0006526,GO:0019213;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418392.1;locus_tag=AC56_RS02355;product=acetylornithine deacetylase;protein_id=WP_032279241.1;transl_table=11
NZ_JJLS01000289.1	RefSeq	gene	40467	41471	.	+	.	ID=gene-AC56_RS02350;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=AC56_RS02350;old_locus_tag=AC56_4418
NZ_JJLS01000289.1	Protein Homology	CDS	40467	41471	.	+	0	ID=cds-WP_000935370.1;Parent=gene-AC56_RS02350;Dbxref=GenBank:WP_000935370.1;Name=WP_000935370.1;Ontology_term=GO:0006526,GO:0006592,GO:0003942,GO:0070401;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA,NADP+ binding|0070401||IEA;go_process=L-arginine biosynthetic process|0006526||IEA,ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122770.1;locus_tag=AC56_RS02350;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_000935370.1;transl_table=11
NZ_JJLS01000289.1	RefSeq	gene	41479	42255	.	+	.	ID=gene-AC56_RS02345;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=AC56_RS02345;old_locus_tag=AC56_4419
NZ_JJLS01000289.1	Protein Homology	CDS	41479	42255	.	+	0	ID=cds-WP_001302318.1;Parent=gene-AC56_RS02345;Dbxref=GenBank:WP_001302318.1;Name=WP_001302318.1;Ontology_term=GO:0006592,GO:0003991,GO:0005737;gbkey=CDS;gene=argB;go_component=cytoplasm|0005737||IEA;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418394.3;locus_tag=AC56_RS02345;product=acetylglutamate kinase;protein_id=WP_001302318.1;transl_table=11
NZ_JJLS01000289.1	RefSeq	gene	42316	43689	.	+	.	ID=gene-AC56_RS02340;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=AC56_RS02340;old_locus_tag=AC56_4420
NZ_JJLS01000289.1	Protein Homology	CDS	42316	43689	.	+	0	ID=cds-WP_001230087.1;Parent=gene-AC56_RS02340;Dbxref=GenBank:WP_001230087.1;Name=WP_001230087.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418395.1;locus_tag=AC56_RS02340;product=argininosuccinate lyase;protein_id=WP_001230087.1;transl_table=11
NZ_JJLS01000289.1	RefSeq	gene	43956	44873	.	+	.	ID=gene-AC56_RS02335;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=AC56_RS02335;old_locus_tag=AC56_4421
NZ_JJLS01000289.1	Protein Homology	CDS	43956	44873	.	+	0	ID=cds-WP_001025939.1;Parent=gene-AC56_RS02335;Dbxref=GenBank:WP_001025939.1;Name=WP_001025939.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=oxyR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831323.1;locus_tag=AC56_RS02335;product=DNA-binding transcriptional regulator OxyR;protein_id=WP_001025939.1;transl_table=11
NZ_JJLS01000289.1	RefSeq	gene	44856	46256	.	-	.	ID=gene-AC56_RS02330;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=AC56_RS02330;old_locus_tag=AC56_4422
NZ_JJLS01000289.1	Protein Homology	CDS	44856	46256	.	-	0	ID=cds-WP_001120800.1;Parent=gene-AC56_RS02330;Dbxref=GenBank:WP_001120800.1;Name=WP_001120800.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (Si-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418397.2;locus_tag=AC56_RS02330;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=WP_001120800.1;transl_table=11
NZ_JJLS01000289.1	RefSeq	gene	46587	47237	.	+	.	ID=gene-AC56_RS02325;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=AC56_RS02325;old_locus_tag=AC56_4424
NZ_JJLS01000289.1	Protein Homology	CDS	46587	47237	.	+	0	ID=cds-WP_139299918.1;Parent=gene-AC56_RS02325;Dbxref=GenBank:WP_139299918.1;Name=WP_139299918.1;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460670.1;locus_tag=AC56_RS02325;product=HTH-type transcriptional repressor FabR;protein_id=WP_139299918.1;transl_table=11
NZ_JJLS01000289.1	RefSeq	gene	47237	47596	.	+	.	ID=gene-AC56_RS02320;Name=yijD;gbkey=Gene;gene=yijD;gene_biotype=protein_coding;locus_tag=AC56_RS02320;old_locus_tag=AC56_4425
NZ_JJLS01000289.1	Protein Homology	CDS	47237	47596	.	+	0	ID=cds-WP_000806411.1;Parent=gene-AC56_RS02320;Dbxref=GenBank:WP_000806411.1;Name=WP_000806411.1;gbkey=CDS;gene=yijD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312922.1;locus_tag=AC56_RS02320;product=YijD family membrane protein;protein_id=WP_000806411.1;transl_table=11
NZ_JJLS01000289.1	RefSeq	gene	47636	48736	.	-	.	ID=gene-AC56_RS02315;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=AC56_RS02315;old_locus_tag=AC56_4426
NZ_JJLS01000289.1	Protein Homology	CDS	47636	48736	.	-	0	ID=cds-WP_000187022.1;Parent=gene-AC56_RS02315;Dbxref=GenBank:WP_000187022.1;Name=WP_000187022.1;Ontology_term=GO:0006396,GO:0030697;gbkey=CDS;gene=trmA;go_function=tRNA (uracil(54)-C5)-methyltransferase activity%2C S-adenosyl methionine-dependent|0030697||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418400.1;locus_tag=AC56_RS02315;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=WP_000187022.1;transl_table=11
NZ_JJLS01000289.1	cmsearch	riboswitch	48850	49039	.	+	.	ID=id-NZ_JJLS01000289.1:48850..49039;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_JJLS01000289.1	RefSeq	gene	49105	50949	.	+	.	ID=gene-AC56_RS02310;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=AC56_RS02310;old_locus_tag=AC56_4427
NZ_JJLS01000289.1	Protein Homology	CDS	49105	50949	.	+	0	ID=cds-WP_032279243.1;Parent=gene-AC56_RS02310;Dbxref=GenBank:WP_032279243.1;Name=WP_032279243.1;Ontology_term=GO:0015889,GO:0015420;gbkey=CDS;gene=btuB;go_function=ABC-type vitamin B12 transporter activity|0015420||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418401.1;locus_tag=AC56_RS02310;product=TonB-dependent vitamin B12 receptor BtuB;protein_id=WP_032279243.1;transl_table=11
NZ_JJLS01000289.1	RefSeq	gene	50894	51751	.	+	.	ID=gene-AC56_RS02305;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=AC56_RS02305;old_locus_tag=AC56_4428
NZ_JJLS01000289.1	Protein Homology	CDS	50894	51751	.	+	0	ID=cds-WP_000201819.1;Parent=gene-AC56_RS02305;Dbxref=GenBank:WP_000201819.1;Name=WP_000201819.1;Ontology_term=GO:0008152,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312925.2;locus_tag=AC56_RS02305;product=glutamate racemase;protein_id=WP_000201819.1;transl_table=11
##sequence-region NZ_JJLS01000290.1 1 1772
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000290.1	RefSeq	region	1	1772	.	+	.	ID=NZ_JJLS01000290.1:1..1772;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000290.1	RefSeq	gene	284	1772	.	+	.	ID=gene-AC56_RS02300;Name=AC56_RS02300;end_range=1772,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC56_RS02300;old_locus_tag=AC56_4429;partial=true
NZ_JJLS01000290.1	cmsearch	rRNA	284	1772	.	+	.	ID=rna-AC56_RS02300;Parent=gene-AC56_RS02300;Dbxref=RFAM:RF00177;end_range=1772,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS02300;partial=true;product=16S ribosomal RNA
NZ_JJLS01000290.1	cmsearch	exon	284	1772	.	+	.	ID=exon-AC56_RS02300-1;Parent=rna-AC56_RS02300;Dbxref=RFAM:RF00177;end_range=1772,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS02300;partial=true;product=16S ribosomal RNA
##sequence-region NZ_JJLS01000291.1 1 38187
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000291.1	RefSeq	region	1	38187	.	+	.	ID=NZ_JJLS01000291.1:1..38187;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000291.1	RefSeq	gene	1	121	.	+	.	ID=gene-AC56_RS0127385;Name=AC56_RS0127385;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC56_RS0127385;partial=true;start_range=.,1
NZ_JJLS01000291.1	cmsearch	rRNA	1	121	.	+	.	ID=rna-AC56_RS0127385;Parent=gene-AC56_RS0127385;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS0127385;partial=true;product=23S ribosomal RNA;start_range=.,1
NZ_JJLS01000291.1	cmsearch	exon	1	121	.	+	.	ID=exon-AC56_RS0127385-1;Parent=rna-AC56_RS0127385;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS0127385;partial=true;product=23S ribosomal RNA;start_range=.,1
NZ_JJLS01000291.1	RefSeq	gene	217	332	.	+	.	ID=gene-AC56_RS02295;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AC56_RS02295;old_locus_tag=AC56_4430
NZ_JJLS01000291.1	cmsearch	rRNA	217	332	.	+	.	ID=rna-AC56_RS02295;Parent=gene-AC56_RS02295;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS02295;product=5S ribosomal RNA
NZ_JJLS01000291.1	cmsearch	exon	217	332	.	+	.	ID=exon-AC56_RS02295-1;Parent=rna-AC56_RS02295;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS02295;product=5S ribosomal RNA
NZ_JJLS01000291.1	RefSeq	gene	635	1663	.	+	.	ID=gene-AC56_RS02290;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=AC56_RS02290;old_locus_tag=AC56_4431
NZ_JJLS01000291.1	Protein Homology	CDS	635	1663	.	+	0	ID=cds-WP_001016699.1;Parent=gene-AC56_RS02290;Dbxref=GenBank:WP_001016699.1;Name=WP_001016699.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418403.1;locus_tag=AC56_RS02290;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_001016699.1;transl_table=11
NZ_JJLS01000291.1	RefSeq	gene	1660	2625	.	+	.	ID=gene-AC56_RS02285;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=AC56_RS02285;old_locus_tag=AC56_4432
NZ_JJLS01000291.1	Protein Homology	CDS	1660	2625	.	+	0	ID=cds-WP_032279245.1;Parent=gene-AC56_RS02285;Dbxref=GenBank:WP_032279245.1;Name=WP_032279245.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418404.1;locus_tag=AC56_RS02285;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WP_032279245.1;transl_table=11
NZ_JJLS01000291.1	RefSeq	gene	2654	3604	.	-	.	ID=gene-AC56_RS02280;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=AC56_RS02280;old_locus_tag=AC56_4433
NZ_JJLS01000291.1	Protein Homology	CDS	2654	3604	.	-	0	ID=cds-WP_000023081.1;Parent=gene-AC56_RS02280;Dbxref=GenBank:WP_000023081.1;Name=WP_000023081.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418405.1;locus_tag=AC56_RS02280;product=type I pantothenate kinase;protein_id=WP_000023081.1;transl_table=11
NZ_JJLS01000291.1	RefSeq	gene	3966	4041	.	+	.	ID=gene-AC56_RS02275;Name=AC56_RS02275;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS02275;old_locus_tag=AC56_4435
NZ_JJLS01000291.1	tRNAscan-SE	tRNA	3966	4041	.	+	.	ID=rna-AC56_RS02275;Parent=gene-AC56_RS02275;anticodon=(pos:3999..4001);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS02275;product=tRNA-Thr
NZ_JJLS01000291.1	tRNAscan-SE	exon	3966	4041	.	+	.	ID=exon-AC56_RS02275-1;Parent=rna-AC56_RS02275;anticodon=(pos:3999..4001);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS02275;product=tRNA-Thr
NZ_JJLS01000291.1	RefSeq	gene	4050	4134	.	+	.	ID=gene-AC56_RS02270;Name=AC56_RS02270;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS02270;old_locus_tag=AC56_4436
NZ_JJLS01000291.1	tRNAscan-SE	tRNA	4050	4134	.	+	.	ID=rna-AC56_RS02270;Parent=gene-AC56_RS02270;anticodon=(pos:4084..4086);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS02270;product=tRNA-Tyr
NZ_JJLS01000291.1	tRNAscan-SE	exon	4050	4134	.	+	.	ID=exon-AC56_RS02270-1;Parent=rna-AC56_RS02270;anticodon=(pos:4084..4086);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS02270;product=tRNA-Tyr
NZ_JJLS01000291.1	RefSeq	gene	4251	4325	.	+	.	ID=gene-AC56_RS02265;Name=AC56_RS02265;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS02265;old_locus_tag=AC56_4437
NZ_JJLS01000291.1	tRNAscan-SE	tRNA	4251	4325	.	+	.	ID=rna-AC56_RS02265;Parent=gene-AC56_RS02265;anticodon=(pos:4284..4286);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS02265;product=tRNA-Gly
NZ_JJLS01000291.1	tRNAscan-SE	exon	4251	4325	.	+	.	ID=exon-AC56_RS02265-1;Parent=rna-AC56_RS02265;anticodon=(pos:4284..4286);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS02265;product=tRNA-Gly
NZ_JJLS01000291.1	RefSeq	gene	4332	4407	.	+	.	ID=gene-AC56_RS02260;Name=AC56_RS02260;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS02260;old_locus_tag=AC56_4438
NZ_JJLS01000291.1	tRNAscan-SE	tRNA	4332	4407	.	+	.	ID=rna-AC56_RS02260;Parent=gene-AC56_RS02260;anticodon=(pos:4365..4367);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS02260;product=tRNA-Thr
NZ_JJLS01000291.1	tRNAscan-SE	exon	4332	4407	.	+	.	ID=exon-AC56_RS02260-1;Parent=rna-AC56_RS02260;anticodon=(pos:4365..4367);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS02260;product=tRNA-Thr
NZ_JJLS01000291.1	RefSeq	gene	4522	5706	.	+	.	ID=gene-AC56_RS02255;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=AC56_RS02255;old_locus_tag=AC56_4439
NZ_JJLS01000291.1	Protein Homology	CDS	4522	5706	.	+	0	ID=cds-WP_000031784.1;Parent=gene-AC56_RS02255;Dbxref=GenBank:WP_000031784.1;Name=WP_000031784.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312930.1;locus_tag=AC56_RS02255;product=elongation factor Tu;protein_id=WP_000031784.1;transl_table=11
NZ_JJLS01000291.1	RefSeq	gene	5936	6319	.	+	.	ID=gene-AC56_RS02250;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=AC56_RS02250;old_locus_tag=AC56_4440
NZ_JJLS01000291.1	Protein Homology	CDS	5936	6319	.	+	0	ID=cds-WP_001275702.1;Parent=gene-AC56_RS02250;Dbxref=GenBank:WP_001275702.1;Name=WP_001275702.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1;locus_tag=AC56_RS02250;product=preprotein translocase subunit SecE;protein_id=WP_001275702.1;transl_table=11
NZ_JJLS01000291.1	RefSeq	gene	6321	6866	.	+	.	ID=gene-AC56_RS02245;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=AC56_RS02245;old_locus_tag=AC56_4441
NZ_JJLS01000291.1	Protein Homology	CDS	6321	6866	.	+	0	ID=cds-WP_001287516.1;Parent=gene-AC56_RS02245;Dbxref=GenBank:WP_001287516.1;Name=WP_001287516.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280494.1;locus_tag=AC56_RS02245;product=transcription termination/antitermination protein NusG;protein_id=WP_001287516.1;transl_table=11
NZ_JJLS01000291.1	RefSeq	gene	7025	7453	.	+	.	ID=gene-AC56_RS02240;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=AC56_RS02240;old_locus_tag=AC56_4442
NZ_JJLS01000291.1	Protein Homology	CDS	7025	7453	.	+	0	ID=cds-WP_001085926.1;Parent=gene-AC56_RS02240;Dbxref=GenBank:WP_001085926.1;Name=WP_001085926.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1;locus_tag=AC56_RS02240;product=50S ribosomal protein L11;protein_id=WP_001085926.1;transl_table=11
NZ_JJLS01000291.1	RefSeq	gene	7457	8161	.	+	.	ID=gene-AC56_RS02235;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=AC56_RS02235;old_locus_tag=AC56_4443
NZ_JJLS01000291.1	Protein Homology	CDS	7457	8161	.	+	0	ID=cds-WP_001096684.1;Parent=gene-AC56_RS02235;Dbxref=GenBank:WP_001096684.1;Name=WP_001096684.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312934.1;locus_tag=AC56_RS02235;product=50S ribosomal protein L1;protein_id=WP_001096684.1;transl_table=11
NZ_JJLS01000291.1	RefSeq	gene	8574	9071	.	+	.	ID=gene-AC56_RS02230;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=AC56_RS02230;old_locus_tag=AC56_4444
NZ_JJLS01000291.1	Protein Homology	CDS	8574	9071	.	+	0	ID=cds-WP_001207201.1;Parent=gene-AC56_RS02230;Dbxref=GenBank:WP_001207201.1;Name=WP_001207201.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=AC56_RS02230;product=50S ribosomal protein L10;protein_id=WP_001207201.1;transl_table=11
NZ_JJLS01000291.1	RefSeq	gene	9138	9503	.	+	.	ID=gene-AC56_RS02225;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=AC56_RS02225;old_locus_tag=AC56_4445
NZ_JJLS01000291.1	Protein Homology	CDS	9138	9503	.	+	0	ID=cds-WP_000028878.1;Parent=gene-AC56_RS02225;Dbxref=GenBank:WP_000028878.1;Name=WP_000028878.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1;locus_tag=AC56_RS02225;product=50S ribosomal protein L7/L12;protein_id=WP_000028878.1;transl_table=11
NZ_JJLS01000291.1	RefSeq	gene	9823	13851	.	+	.	ID=gene-AC56_RS02220;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=AC56_RS02220;old_locus_tag=AC56_4446
NZ_JJLS01000291.1	Protein Homology	CDS	9823	13851	.	+	0	ID=cds-WP_032279247.1;Parent=gene-AC56_RS02220;Dbxref=GenBank:WP_032279247.1;Name=WP_032279247.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1;locus_tag=AC56_RS02220;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_032279247.1;transl_table=11
NZ_JJLS01000291.1	RefSeq	gene	13928	18151	.	+	.	ID=gene-AC56_RS02215;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=AC56_RS02215;old_locus_tag=AC56_4447
NZ_JJLS01000291.1	Protein Homology	CDS	13928	18151	.	+	0	ID=cds-WP_032279249.1;Parent=gene-AC56_RS02215;Dbxref=GenBank:WP_032279249.1;Name=WP_032279249.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312938.1;locus_tag=AC56_RS02215;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_032279249.1;transl_table=11
NZ_JJLS01000291.1	RefSeq	gene	18364	18903	.	+	.	ID=gene-AC56_RS02210;Name=yjaZ;gbkey=Gene;gene=yjaZ;gene_biotype=protein_coding;locus_tag=AC56_RS02210;old_locus_tag=AC56_4448
NZ_JJLS01000291.1	Protein Homology	CDS	18364	18903	.	+	0	ID=cds-WP_001307500.1;Parent=gene-AC56_RS02210;Dbxref=GenBank:WP_001307500.1;Name=WP_001307500.1;gbkey=CDS;gene=yjaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418416.1;locus_tag=AC56_RS02210;product=heat-shock protein C;protein_id=WP_001307500.1;transl_table=11
NZ_JJLS01000291.1	RefSeq	gene	19313	20446	.	-	.	ID=gene-AC56_RS02205;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=AC56_RS02205;old_locus_tag=AC56_4449
NZ_JJLS01000291.1	Protein Homology	CDS	19313	20446	.	-	0	ID=cds-WP_032279250.1;Parent=gene-AC56_RS02205;Dbxref=GenBank:WP_032279250.1;Name=WP_032279250.1;Ontology_term=GO:0009228,GO:0005506,GO:0016829,GO:0051539,GO:1904047;gbkey=CDS;gene=thiH;go_function=iron ion binding|0005506||IEA,lyase activity|0016829||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418417.1;locus_tag=AC56_RS02205;product=2-iminoacetate synthase ThiH;protein_id=WP_032279250.1;transl_table=11
NZ_JJLS01000291.1	RefSeq	gene	20443	21213	.	-	.	ID=gene-AC56_RS02200;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=AC56_RS02200;old_locus_tag=AC56_4450
NZ_JJLS01000291.1	Protein Homology	CDS	20443	21213	.	-	0	ID=cds-WP_032279252.1;Parent=gene-AC56_RS02200;Dbxref=GenBank:WP_032279252.1;Name=WP_032279252.1;gbkey=CDS;gene=thiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418418.2;locus_tag=AC56_RS02200;product=thiazole synthase;protein_id=WP_032279252.1;transl_table=11
NZ_JJLS01000291.1	RefSeq	gene	21215	21415	.	-	.	ID=gene-AC56_RS02195;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=AC56_RS02195;old_locus_tag=AC56_4451
NZ_JJLS01000291.1	Protein Homology	CDS	21215	21415	.	-	0	ID=cds-WP_001166232.1;Parent=gene-AC56_RS02195;Dbxref=GenBank:WP_001166232.1;Name=WP_001166232.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502668.1;locus_tag=AC56_RS02195;product=sulfur carrier protein ThiS;protein_id=WP_001166232.1;transl_table=11
NZ_JJLS01000291.1	RefSeq	gene	21399	22154	.	-	.	ID=gene-AC56_RS02190;Name=thiF;gbkey=Gene;gene=thiF;gene_biotype=protein_coding;locus_tag=AC56_RS02190;old_locus_tag=AC56_4452
NZ_JJLS01000291.1	Protein Homology	CDS	21399	22154	.	-	0	ID=cds-WP_000999743.1;Parent=gene-AC56_RS02190;Dbxref=GenBank:WP_000999743.1;Name=WP_000999743.1;Ontology_term=GO:0009228,GO:0016779;gbkey=CDS;gene=thiF;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418420.4;locus_tag=AC56_RS02190;product=thiazole biosynthesis adenylyltransferase ThiF;protein_id=WP_000999743.1;transl_table=11
NZ_JJLS01000291.1	RefSeq	gene	22147	22782	.	-	.	ID=gene-AC56_RS02185;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=AC56_RS02185;old_locus_tag=AC56_4453
NZ_JJLS01000291.1	Protein Homology	CDS	22147	22782	.	-	0	ID=cds-WP_000284615.1;Parent=gene-AC56_RS02185;Dbxref=GenBank:WP_000284615.1;Name=WP_000284615.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418421.1;locus_tag=AC56_RS02185;product=thiamine phosphate synthase;protein_id=WP_000284615.1;transl_table=11
NZ_JJLS01000291.1	RefSeq	gene	22782	24677	.	-	.	ID=gene-AC56_RS02180;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=AC56_RS02180;old_locus_tag=AC56_4454
NZ_JJLS01000291.1	Protein Homology	CDS	22782	24677	.	-	0	ID=cds-WP_001276903.1;Parent=gene-AC56_RS02180;Dbxref=GenBank:WP_001276903.1;Name=WP_001276903.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312944.1;locus_tag=AC56_RS02180;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_001276903.1;transl_table=11
NZ_JJLS01000291.1	cmsearch	riboswitch	24758	24858	.	-	.	ID=id-NZ_JJLS01000291.1:24758..24858;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_JJLS01000291.1	RefSeq	gene	24911	25387	.	-	.	ID=gene-AC56_RS02175;Name=rsd;gbkey=Gene;gene=rsd;gene_biotype=protein_coding;locus_tag=AC56_RS02175;old_locus_tag=AC56_4455
NZ_JJLS01000291.1	Protein Homology	CDS	24911	25387	.	-	0	ID=cds-WP_000934302.1;Parent=gene-AC56_RS02175;Dbxref=GenBank:WP_000934302.1;Name=WP_000934302.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rsd;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312945.1;locus_tag=AC56_RS02175;product=sigma D regulator;protein_id=WP_000934302.1;transl_table=11
NZ_JJLS01000291.1	RefSeq	gene	25482	26255	.	+	.	ID=gene-AC56_RS02170;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=AC56_RS02170;old_locus_tag=AC56_4456
NZ_JJLS01000291.1	Protein Homology	CDS	25482	26255	.	+	0	ID=cds-WP_000373940.1;Parent=gene-AC56_RS02170;Dbxref=GenBank:WP_000373940.1;Name=WP_000373940.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026280.1;locus_tag=AC56_RS02170;product=NAD(+) diphosphatase;protein_id=WP_000373940.1;transl_table=11
NZ_JJLS01000291.1	RefSeq	gene	26295	27359	.	+	.	ID=gene-AC56_RS02165;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=AC56_RS02165;old_locus_tag=AC56_4457
NZ_JJLS01000291.1	Protein Homology	CDS	26295	27359	.	+	0	ID=cds-WP_032279253.1;Parent=gene-AC56_RS02165;Dbxref=GenBank:WP_032279253.1;Name=WP_032279253.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418425.1;locus_tag=AC56_RS02165;product=uroporphyrinogen decarboxylase;protein_id=WP_032279253.1;transl_table=11
NZ_JJLS01000291.1	RefSeq	gene	27369	28040	.	+	.	ID=gene-AC56_RS02160;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=AC56_RS02160;old_locus_tag=AC56_4458
NZ_JJLS01000291.1	Protein Homology	CDS	27369	28040	.	+	0	ID=cds-WP_000362388.1;Parent=gene-AC56_RS02160;Dbxref=GenBank:WP_000362388.1;Name=WP_000362388.1;Note=cleaves DNA at apurinic or apyrimidinic sites;Ontology_term=GO:0006281,GO:0004519;gbkey=CDS;gene=nfi;go_function=endonuclease activity|0004519||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312948.1;locus_tag=AC56_RS02160;product=deoxyribonuclease V;protein_id=WP_000362388.1;transl_table=11
NZ_JJLS01000291.1	RefSeq	gene	28083	28673	.	+	.	ID=gene-AC56_RS02155;Name=yjaG;gbkey=Gene;gene=yjaG;gene_biotype=protein_coding;locus_tag=AC56_RS02155;old_locus_tag=AC56_4459
NZ_JJLS01000291.1	Protein Homology	CDS	28083	28673	.	+	0	ID=cds-WP_000940106.1;Parent=gene-AC56_RS02155;Dbxref=GenBank:WP_000940106.1;Name=WP_000940106.1;gbkey=CDS;gene=yjaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418427.1;locus_tag=AC56_RS02155;product=YjaG family protein;protein_id=WP_000940106.1;transl_table=11
NZ_JJLS01000291.1	RefSeq	gene	28860	29132	.	+	.	ID=gene-AC56_RS02150;Name=hupA;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;locus_tag=AC56_RS02150;old_locus_tag=AC56_4460
NZ_JJLS01000291.1	Protein Homology	CDS	28860	29132	.	+	0	ID=cds-WP_001044513.1;Parent=gene-AC56_RS02150;Dbxref=GenBank:WP_001044513.1;Name=WP_001044513.1;gbkey=CDS;gene=hupA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1;locus_tag=AC56_RS02150;product=nucleoid-associated protein HU-alpha;protein_id=WP_001044513.1;transl_table=11
NZ_JJLS01000291.1	RefSeq	gene	29145	29840	.	+	.	ID=gene-AC56_RS02145;Name=yjaH;gbkey=Gene;gene=yjaH;gene_biotype=protein_coding;locus_tag=AC56_RS02145;old_locus_tag=AC56_4461
NZ_JJLS01000291.1	Protein Homology	CDS	29145	29840	.	+	0	ID=cds-WP_001300651.1;Parent=gene-AC56_RS02145;Dbxref=GenBank:WP_001300651.1;Name=WP_001300651.1;gbkey=CDS;gene=yjaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709795.2;locus_tag=AC56_RS02145;product=DUF1481 domain-containing protein;protein_id=WP_001300651.1;transl_table=11
NZ_JJLS01000291.1	RefSeq	gene	29842	30261	.	-	.	ID=gene-AC56_RS02140;Name=zraP;gbkey=Gene;gene=zraP;gene_biotype=protein_coding;locus_tag=AC56_RS02140;old_locus_tag=AC56_4462
NZ_JJLS01000291.1	Protein Homology	CDS	29842	30261	.	-	0	ID=cds-WP_001296714.1;Parent=gene-AC56_RS02140;Dbxref=GenBank:WP_001296714.1;Name=WP_001296714.1;gbkey=CDS;gene=zraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312952.2;locus_tag=AC56_RS02140;product=zinc resistance sensor/chaperone ZraP;protein_id=WP_001296714.1;transl_table=11
NZ_JJLS01000291.1	RefSeq	gene	30499	31875	.	+	.	ID=gene-AC56_RS02135;Name=zraS;gbkey=Gene;gene=zraS;gene_biotype=protein_coding;locus_tag=AC56_RS02135;old_locus_tag=AC56_4464
NZ_JJLS01000291.1	Protein Homology	CDS	30499	31875	.	+	0	ID=cds-WP_001211923.1;Parent=gene-AC56_RS02135;Dbxref=GenBank:WP_001211923.1;Name=WP_001211923.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=zraS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709797.1;locus_tag=AC56_RS02135;product=two-component system sensor histidine kinase ZraS;protein_id=WP_001211923.1;transl_table=11
NZ_JJLS01000291.1	RefSeq	gene	31872	33197	.	+	.	ID=gene-AC56_RS02130;Name=zraR;gbkey=Gene;gene=zraR;gene_biotype=protein_coding;locus_tag=AC56_RS02130;old_locus_tag=AC56_4465
NZ_JJLS01000291.1	Protein Homology	CDS	31872	33197	.	+	0	ID=cds-WP_032279255.1;Parent=gene-AC56_RS02130;Dbxref=GenBank:WP_032279255.1;Name=WP_032279255.1;Ontology_term=GO:0000160,GO:0006355,GO:0043565;gbkey=CDS;gene=zraR;go_function=sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418432.1;locus_tag=AC56_RS02130;product=sigma-54-dependent response regulator transcription factor ZraR;protein_id=WP_032279255.1;transl_table=11
NZ_JJLS01000291.1	RefSeq	gene	33194	34483	.	-	.	ID=gene-AC56_RS02125;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=AC56_RS02125;old_locus_tag=AC56_4466
NZ_JJLS01000291.1	Protein Homology	CDS	33194	34483	.	-	0	ID=cds-WP_000866800.1;Parent=gene-AC56_RS02125;Dbxref=GenBank:WP_000866800.1;Name=WP_000866800.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418433.1;locus_tag=AC56_RS02125;product=phosphoribosylamine--glycine ligase;protein_id=WP_000866800.1;transl_table=11
NZ_JJLS01000291.1	RefSeq	gene	34495	36084	.	-	.	ID=gene-AC56_RS02120;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=AC56_RS02120;old_locus_tag=AC56_4467
NZ_JJLS01000291.1	Protein Homology	CDS	34495	36084	.	-	0	ID=cds-WP_032279256.1;Parent=gene-AC56_RS02120;Dbxref=GenBank:WP_032279256.1;Name=WP_032279256.1;Ontology_term=GO:0009152,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=AC56_RS02120;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_032279256.1;transl_table=11
NZ_JJLS01000291.1	RefSeq	gene	36699	38187	.	+	.	ID=gene-AC56_RS02115;Name=AC56_RS02115;end_range=38187,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC56_RS02115;old_locus_tag=AC56_4469;partial=true
NZ_JJLS01000291.1	cmsearch	rRNA	36699	38187	.	+	.	ID=rna-AC56_RS02115;Parent=gene-AC56_RS02115;Dbxref=RFAM:RF00177;end_range=38187,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS02115;partial=true;product=16S ribosomal RNA
NZ_JJLS01000291.1	cmsearch	exon	36699	38187	.	+	.	ID=exon-AC56_RS02115-1;Parent=rna-AC56_RS02115;Dbxref=RFAM:RF00177;end_range=38187,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS02115;partial=true;product=16S ribosomal RNA
##sequence-region NZ_JJLS01000292.1 1 3954
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000292.1	RefSeq	region	1	3954	.	+	.	ID=NZ_JJLS01000292.1:1..3954;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000292.1	RefSeq	gene	1	396	.	+	.	ID=gene-AC56_RS0127395;Name=AC56_RS0127395;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC56_RS0127395;partial=true;start_range=.,1
NZ_JJLS01000292.1	cmsearch	rRNA	1	396	.	+	.	ID=rna-AC56_RS0127395;Parent=gene-AC56_RS0127395;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS0127395;partial=true;product=16S ribosomal RNA;start_range=.,1
NZ_JJLS01000292.1	cmsearch	exon	1	396	.	+	.	ID=exon-AC56_RS0127395-1;Parent=rna-AC56_RS0127395;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS0127395;partial=true;product=16S ribosomal RNA;start_range=.,1
NZ_JJLS01000292.1	RefSeq	gene	465	541	.	+	.	ID=gene-AC56_RS02110;Name=AC56_RS02110;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS02110;old_locus_tag=AC56_4470
NZ_JJLS01000292.1	tRNAscan-SE	tRNA	465	541	.	+	.	ID=rna-AC56_RS02110;Parent=gene-AC56_RS02110;anticodon=(pos:499..501);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS02110;product=tRNA-Ile
NZ_JJLS01000292.1	tRNAscan-SE	exon	465	541	.	+	.	ID=exon-AC56_RS02110-1;Parent=rna-AC56_RS02110;anticodon=(pos:499..501);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS02110;product=tRNA-Ile
NZ_JJLS01000292.1	RefSeq	gene	584	659	.	+	.	ID=gene-AC56_RS02105;Name=AC56_RS02105;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS02105;old_locus_tag=AC56_4471
NZ_JJLS01000292.1	tRNAscan-SE	tRNA	584	659	.	+	.	ID=rna-AC56_RS02105;Parent=gene-AC56_RS02105;anticodon=(pos:617..619);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS02105;product=tRNA-Ala
NZ_JJLS01000292.1	tRNAscan-SE	exon	584	659	.	+	.	ID=exon-AC56_RS02105-1;Parent=rna-AC56_RS02105;anticodon=(pos:617..619);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS02105;product=tRNA-Ala
NZ_JJLS01000292.1	RefSeq	gene	843	3745	.	+	.	ID=gene-AC56_RS02100;Name=AC56_RS02100;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC56_RS02100;old_locus_tag=AC56_4472
NZ_JJLS01000292.1	cmsearch	rRNA	843	3745	.	+	.	ID=rna-AC56_RS02100;Parent=gene-AC56_RS02100;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS02100;product=23S ribosomal RNA
NZ_JJLS01000292.1	cmsearch	exon	843	3745	.	+	.	ID=exon-AC56_RS02100-1;Parent=rna-AC56_RS02100;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS02100;product=23S ribosomal RNA
NZ_JJLS01000292.1	RefSeq	gene	3841	3954	.	+	.	ID=gene-AC56_RS02095;Name=rrf;end_range=3954,.;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AC56_RS02095;old_locus_tag=AC56_4475;partial=true
NZ_JJLS01000292.1	cmsearch	rRNA	3841	3954	.	+	.	ID=rna-AC56_RS02095;Parent=gene-AC56_RS02095;Dbxref=RFAM:RF00001;end_range=3954,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS02095;partial=true;product=5S ribosomal RNA
NZ_JJLS01000292.1	cmsearch	exon	3841	3954	.	+	.	ID=exon-AC56_RS02095-1;Parent=rna-AC56_RS02095;Dbxref=RFAM:RF00001;end_range=3954,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS02095;partial=true;product=5S ribosomal RNA
##sequence-region NZ_JJLS01000293.1 1 27678
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000293.1	RefSeq	region	1	27678	.	+	.	ID=NZ_JJLS01000293.1:1..27678;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000293.1	RefSeq	gene	1	2893	.	+	.	ID=gene-AC56_RS02090;Name=AC56_RS02090;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC56_RS02090;old_locus_tag=AC56_4476;partial=true;start_range=.,1
NZ_JJLS01000293.1	cmsearch	rRNA	1	2893	.	+	.	ID=rna-AC56_RS02090;Parent=gene-AC56_RS02090;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS02090;partial=true;product=23S ribosomal RNA;start_range=.,1
NZ_JJLS01000293.1	cmsearch	exon	1	2893	.	+	.	ID=exon-AC56_RS02090-1;Parent=rna-AC56_RS02090;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS02090;partial=true;product=23S ribosomal RNA;start_range=.,1
NZ_JJLS01000293.1	RefSeq	gene	2989	3104	.	+	.	ID=gene-AC56_RS02085;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AC56_RS02085;old_locus_tag=AC56_4479
NZ_JJLS01000293.1	cmsearch	rRNA	2989	3104	.	+	.	ID=rna-AC56_RS02085;Parent=gene-AC56_RS02085;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS02085;product=5S ribosomal RNA
NZ_JJLS01000293.1	cmsearch	exon	2989	3104	.	+	.	ID=exon-AC56_RS02085-1;Parent=rna-AC56_RS02085;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC56_RS02085;product=5S ribosomal RNA
NZ_JJLS01000293.1	RefSeq	gene	3181	3564	.	+	.	ID=gene-AC56_RS02080;Name=yjaA;gbkey=Gene;gene=yjaA;gene_biotype=protein_coding;locus_tag=AC56_RS02080;old_locus_tag=AC56_4480
NZ_JJLS01000293.1	Protein Homology	CDS	3181	3564	.	+	0	ID=cds-WP_001326558.1;Parent=gene-AC56_RS02080;Dbxref=GenBank:WP_001326558.1;Name=WP_001326558.1;gbkey=CDS;gene=yjaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418435.1;locus_tag=AC56_RS02080;product=YjaA family stress response protein;protein_id=WP_001326558.1;transl_table=11
NZ_JJLS01000293.1	RefSeq	gene	3627	4070	.	-	.	ID=gene-AC56_RS02075;Name=yjaB;gbkey=Gene;gene=yjaB;gene_biotype=protein_coding;locus_tag=AC56_RS02075;old_locus_tag=AC56_4481
NZ_JJLS01000293.1	Protein Homology	CDS	3627	4070	.	-	0	ID=cds-WP_000237004.1;Parent=gene-AC56_RS02075;Dbxref=GenBank:WP_000237004.1;Name=WP_000237004.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yjaB;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418436.1;locus_tag=AC56_RS02075;product=acetyltransferase;protein_id=WP_000237004.1;transl_table=11
NZ_JJLS01000293.1	RefSeq	gene	4227	5156	.	+	.	ID=gene-AC56_RS02070;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=AC56_RS02070;old_locus_tag=AC56_4482
NZ_JJLS01000293.1	Protein Homology	CDS	4227	5156	.	+	0	ID=cds-WP_001122778.1;Parent=gene-AC56_RS02070;Dbxref=GenBank:WP_001122778.1;Name=WP_001122778.1;Ontology_term=GO:0019281,GO:0008899,GO:0005737;gbkey=CDS;gene=metA;go_component=cytoplasm|0005737||IEA;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine|0019281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132837.1;locus_tag=AC56_RS02070;product=homoserine O-acetyltransferase MetA;protein_id=WP_001122778.1;transl_table=11
NZ_JJLS01000293.1	RefSeq	gene	5425	7026	.	+	.	ID=gene-AC56_RS02065;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=AC56_RS02065;old_locus_tag=AC56_4483
NZ_JJLS01000293.1	Protein Homology	CDS	5425	7026	.	+	0	ID=cds-WP_032247970.1;Parent=gene-AC56_RS02065;Dbxref=GenBank:WP_032247970.1;Name=WP_032247970.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;gene=aceB;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418438.1;locus_tag=AC56_RS02065;product=malate synthase A;protein_id=WP_032247970.1;transl_table=11
NZ_JJLS01000293.1	RefSeq	gene	7056	8360	.	+	.	ID=gene-AC56_RS02060;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=AC56_RS02060;old_locus_tag=AC56_4484
NZ_JJLS01000293.1	Protein Homology	CDS	7056	8360	.	+	0	ID=cds-WP_000857856.1;Parent=gene-AC56_RS02060;Dbxref=GenBank:WP_000857856.1;Name=WP_000857856.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418439.1;locus_tag=AC56_RS02060;product=isocitrate lyase;protein_id=WP_000857856.1;transl_table=11
NZ_JJLS01000293.1	RefSeq	gene	8641	10377	.	+	.	ID=gene-AC56_RS02055;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=AC56_RS02055;old_locus_tag=AC56_4485
NZ_JJLS01000293.1	Protein Homology	CDS	8641	10377	.	+	0	ID=cds-WP_001137205.1;Parent=gene-AC56_RS02055;Dbxref=GenBank:WP_001137205.1;Name=WP_001137205.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418440.1;locus_tag=AC56_RS02055;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WP_001137205.1;transl_table=11
NZ_JJLS01000293.1	RefSeq	gene	10346	11920	.	-	.	ID=gene-AC56_RS02050;Name=AC56_RS02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS02050;old_locus_tag=AC56_4486
NZ_JJLS01000293.1	Protein Homology	CDS	10346	11920	.	-	0	ID=cds-WP_032279257.1;Parent=gene-AC56_RS02050;Dbxref=GenBank:WP_032279257.1;Name=WP_032279257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418441.1;locus_tag=AC56_RS02050;product=ShET2/EspL2 family type III secretion system effector toxin;protein_id=WP_032279257.1;transl_table=11
NZ_JJLS01000293.1	RefSeq	gene	12237	13061	.	-	.	ID=gene-AC56_RS02045;Name=iclR;gbkey=Gene;gene=iclR;gene_biotype=protein_coding;locus_tag=AC56_RS02045;old_locus_tag=AC56_4487
NZ_JJLS01000293.1	Protein Homology	CDS	12237	13061	.	-	0	ID=cds-WP_000226403.1;Parent=gene-AC56_RS02045;Dbxref=GenBank:WP_000226403.1;Name=WP_000226403.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=iclR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418442.2;locus_tag=AC56_RS02045;product=glyoxylate bypass operon transcriptional repressor IclR;protein_id=WP_000226403.1;transl_table=11
NZ_JJLS01000293.1	RefSeq	gene	13261	16944	.	+	.	ID=gene-AC56_RS02040;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=AC56_RS02040;old_locus_tag=AC56_4488
NZ_JJLS01000293.1	Protein Homology	CDS	13261	16944	.	+	0	ID=cds-WP_000096011.1;Parent=gene-AC56_RS02040;Dbxref=GenBank:WP_000096011.1;Name=WP_000096011.1;Ontology_term=GO:0009086,GO:0008270,GO:0008705,GO:0031419;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA,cobalamin binding|0031419||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418443.1;locus_tag=AC56_RS02040;product=methionine synthase;protein_id=WP_000096011.1;transl_table=11
NZ_JJLS01000293.1	RefSeq	gene	17164	18795	.	+	.	ID=gene-AC56_RS02035;Name=yjbB;gbkey=Gene;gene=yjbB;gene_biotype=protein_coding;locus_tag=AC56_RS02035;old_locus_tag=AC56_4489
NZ_JJLS01000293.1	Protein Homology	CDS	17164	18795	.	+	0	ID=cds-WP_032279258.1;Parent=gene-AC56_RS02035;Dbxref=GenBank:WP_032279258.1;Name=WP_032279258.1;Ontology_term=GO:0044341,GO:0005436,GO:0005886;gbkey=CDS;gene=yjbB;go_component=plasma membrane|0005886||IEA;go_function=sodium:phosphate symporter activity|0005436||IEA;go_process=sodium-dependent phosphate transport|0044341||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418444.1;locus_tag=AC56_RS02035;product=Na/Pi cotransporter family protein;protein_id=WP_032279258.1;transl_table=11
NZ_JJLS01000293.1	RefSeq	gene	18885	19574	.	-	.	ID=gene-AC56_RS02030;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=AC56_RS02030;old_locus_tag=AC56_4490
NZ_JJLS01000293.1	Protein Homology	CDS	18885	19574	.	-	0	ID=cds-WP_000421772.1;Parent=gene-AC56_RS02030;Dbxref=GenBank:WP_000421772.1;Name=WP_000421772.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=pepE;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709805.1;locus_tag=AC56_RS02030;product=dipeptidase PepE;protein_id=WP_000421772.1;transl_table=11
NZ_JJLS01000293.1	RefSeq	gene	19786	20658	.	+	.	ID=gene-AC56_RS02025;Name=rluF;gbkey=Gene;gene=rluF;gene_biotype=protein_coding;locus_tag=AC56_RS02025;old_locus_tag=AC56_4491
NZ_JJLS01000293.1	Protein Homology	CDS	19786	20658	.	+	0	ID=cds-WP_032279259.1;Parent=gene-AC56_RS02025;Dbxref=GenBank:WP_032279259.1;Name=WP_032279259.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluF;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709813.1;locus_tag=AC56_RS02025;product=23S rRNA pseudouridine(2604) synthase RluF;protein_id=WP_032279259.1;transl_table=11
NZ_JJLS01000293.1	RefSeq	gene	20791	21063	.	-	.	ID=gene-AC56_RS02020;Name=yjbD;gbkey=Gene;gene=yjbD;gene_biotype=protein_coding;locus_tag=AC56_RS02020;old_locus_tag=AC56_4492
NZ_JJLS01000293.1	Protein Homology	CDS	20791	21063	.	-	0	ID=cds-WP_001207638.1;Parent=gene-AC56_RS02020;Dbxref=GenBank:WP_001207638.1;Name=WP_001207638.1;gbkey=CDS;gene=yjbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313033.1;locus_tag=AC56_RS02020;product=DUF3811 domain-containing protein;protein_id=WP_001207638.1;transl_table=11
NZ_JJLS01000293.1	RefSeq	gene	21315	22664	.	-	.	ID=gene-AC56_RS02015;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=AC56_RS02015;old_locus_tag=AC56_4493
NZ_JJLS01000293.1	Protein Homology	CDS	21315	22664	.	-	0	ID=cds-WP_001290322.1;Parent=gene-AC56_RS02015;Dbxref=GenBank:WP_001290322.1;Name=WP_001290322.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;gene=lysC;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313034.1;locus_tag=AC56_RS02015;product=lysine-sensitive aspartokinase 3;protein_id=WP_001290322.1;transl_table=11
NZ_JJLS01000293.1	cmsearch	riboswitch	22756	22952	.	-	.	ID=id-NZ_JJLS01000293.1:22756..22952;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_JJLS01000293.1	RefSeq	gene	23189	24838	.	+	.	ID=gene-AC56_RS02010;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=AC56_RS02010;old_locus_tag=AC56_4495
NZ_JJLS01000293.1	Protein Homology	CDS	23189	24838	.	+	0	ID=cds-WP_000789986.1;Parent=gene-AC56_RS02010;Dbxref=GenBank:WP_000789986.1;Name=WP_000789986.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313035.1;locus_tag=AC56_RS02010;product=glucose-6-phosphate isomerase;protein_id=WP_000789986.1;transl_table=11
NZ_JJLS01000293.1	RefSeq	gene	25337	25579	.	+	.	ID=gene-AC56_RS02005;Name=yjbE;gbkey=Gene;gene=yjbE;gene_biotype=protein_coding;locus_tag=AC56_RS02005;old_locus_tag=AC56_4496
NZ_JJLS01000293.1	Protein Homology	CDS	25337	25579	.	+	0	ID=cds-WP_000757333.1;Parent=gene-AC56_RS02005;Dbxref=GenBank:WP_000757333.1;Name=WP_000757333.1;gbkey=CDS;gene=yjbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313036.1;locus_tag=AC56_RS02005;product=exopolysaccharide production protein YjbE;protein_id=WP_000757333.1;transl_table=11
NZ_JJLS01000293.1	RefSeq	gene	25693	26331	.	+	.	ID=gene-AC56_RS02000;Name=yjbF;gbkey=Gene;gene=yjbF;gene_biotype=protein_coding;locus_tag=AC56_RS02000;old_locus_tag=AC56_4497
NZ_JJLS01000293.1	Protein Homology	CDS	25693	26331	.	+	0	ID=cds-WP_032279261.1;Parent=gene-AC56_RS02000;Dbxref=GenBank:WP_032279261.1;Name=WP_032279261.1;gbkey=CDS;gene=yjbF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418451.4;locus_tag=AC56_RS02000;product=YjbF family lipoprotein;protein_id=WP_032279261.1;transl_table=11
NZ_JJLS01000293.1	RefSeq	gene	26328	27065	.	+	.	ID=gene-AC56_RS01995;Name=yjbG;gbkey=Gene;gene=yjbG;gene_biotype=protein_coding;locus_tag=AC56_RS01995;old_locus_tag=AC56_4498
NZ_JJLS01000293.1	Protein Homology	CDS	26328	27065	.	+	0	ID=cds-WP_000595558.1;Parent=gene-AC56_RS01995;Dbxref=GenBank:WP_000595558.1;Name=WP_000595558.1;gbkey=CDS;gene=yjbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418452.1;locus_tag=AC56_RS01995;product=capsule biosynthesis GfcC family protein;protein_id=WP_000595558.1;transl_table=11
NZ_JJLS01000293.1	RefSeq	pseudogene	27065	27187	.	+	.	ID=gene-AC56_RS33470;Name=AC56_RS33470;end_range=27187,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33470;old_locus_tag=AC56_4499;partial=true;pseudo=true
NZ_JJLS01000293.1	Protein Homology	CDS	27065	27187	.	+	0	ID=cds-AC56_RS33470;Parent=gene-AC56_RS33470;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=27187,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313039.1;locus_tag=AC56_RS33470;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_JJLS01000293.1	RefSeq	pseudogene	27242	27678	.	-	.	ID=gene-AC56_RS01990;Name=AC56_RS01990;end_range=27678,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS01990;old_locus_tag=AC56_4500;partial=true;pseudo=true
NZ_JJLS01000293.1	Protein Homology	CDS	27242	27678	.	-	2	ID=cds-AC56_RS01990;Parent=gene-AC56_RS01990;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=27678,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS01990;partial=true;product=IS5-like element IS903B family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000294.1 1 48107
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000294.1	RefSeq	region	1	48107	.	+	.	ID=NZ_JJLS01000294.1:1..48107;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000294.1	RefSeq	gene	1	491	.	-	.	ID=gene-AC56_RS01985;Name=AC56_RS01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS01985;old_locus_tag=AC56_4501;partial=true;start_range=.,1
NZ_JJLS01000294.1	Protein Homology	CDS	1	491	.	-	0	ID=cds-WP_162720866.1-2;Parent=gene-AC56_RS01985;Dbxref=GenBank:WP_162720866.1;Name=WP_162720866.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS01985;partial=true;product=IS5 family transposase;protein_id=WP_162720866.1;start_range=.,1;transl_table=11
NZ_JJLS01000294.1	RefSeq	pseudogene	509	1711	.	+	.	ID=gene-AC56_RS01980;Name=AC56_RS01980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS01980;old_locus_tag=AC56_4502;partial=true;pseudo=true;start_range=.,509
NZ_JJLS01000294.1	Protein Homology	CDS	509	1711	.	+	0	ID=cds-AC56_RS01980;Parent=gene-AC56_RS01980;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418453.1;locus_tag=AC56_RS01980;partial=true;product=YjbH domain-containing protein;pseudo=true;start_range=.,509;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	1758	2036	.	-	.	ID=gene-AC56_RS0127400;Name=AC56_RS0127400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0127400
NZ_JJLS01000294.1	Protein Homology	CDS	1758	2036	.	-	0	ID=cds-WP_001295279.1;Parent=gene-AC56_RS0127400;Dbxref=GenBank:WP_001295279.1;Name=WP_001295279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165332.1;locus_tag=AC56_RS0127400;product=periplasmic protein;protein_id=WP_001295279.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	2037	2180	.	+	.	ID=gene-AC56_RS32865;Name=AC56_RS32865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS32865;old_locus_tag=AC56_4504
NZ_JJLS01000294.1	GeneMarkS-2+	CDS	2037	2180	.	+	0	ID=cds-WP_000487766.1;Parent=gene-AC56_RS32865;Dbxref=GenBank:WP_000487766.1;Name=WP_000487766.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS32865;product=hypothetical protein;protein_id=WP_000487766.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	2306	2716	.	+	.	ID=gene-AC56_RS01970;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=AC56_RS01970;old_locus_tag=AC56_4505
NZ_JJLS01000294.1	Protein Homology	CDS	2306	2716	.	+	0	ID=cds-WP_000202902.1;Parent=gene-AC56_RS01970;Dbxref=GenBank:WP_000202902.1;Name=WP_000202902.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418454.1;locus_tag=AC56_RS01970;product=phosphate-starvation-inducible protein PsiE;protein_id=WP_000202902.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	pseudogene	2760	4236	.	-	.	ID=gene-AC56_RS01965;Name=xylE;gbkey=Gene;gene=xylE;gene_biotype=pseudogene;locus_tag=AC56_RS01965;old_locus_tag=AC56_4506;pseudo=true
NZ_JJLS01000294.1	Protein Homology	CDS	2760	4236	.	-	0	ID=cds-AC56_RS01965;Parent=gene-AC56_RS01965;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=xylE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313041.1;locus_tag=AC56_RS01965;product=D-xylose transporter XylE;pseudo=true;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	4608	5498	.	-	.	ID=gene-AC56_RS01960;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=AC56_RS01960;old_locus_tag=AC56_4507
NZ_JJLS01000294.1	Protein Homology	CDS	4608	5498	.	-	0	ID=cds-WP_001252058.1;Parent=gene-AC56_RS01960;Dbxref=GenBank:WP_001252058.1;Name=WP_001252058.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=malG;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001252048.1;locus_tag=AC56_RS01960;product=maltose ABC transporter permease MalG;protein_id=WP_001252058.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	5513	7057	.	-	.	ID=gene-AC56_RS01955;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=AC56_RS01955;old_locus_tag=AC56_4508
NZ_JJLS01000294.1	Protein Homology	CDS	5513	7057	.	-	0	ID=cds-WP_001365426.1;Parent=gene-AC56_RS01955;Dbxref=GenBank:WP_001365426.1;Name=WP_001365426.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=malF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418457.1;locus_tag=AC56_RS01955;product=maltose ABC transporter permease MalF;protein_id=WP_001365426.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	7211	8401	.	-	.	ID=gene-AC56_RS01950;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=AC56_RS01950;old_locus_tag=AC56_4509
NZ_JJLS01000294.1	Protein Homology	CDS	7211	8401	.	-	0	ID=cds-WP_000695387.1;Parent=gene-AC56_RS01950;Dbxref=GenBank:WP_000695387.1;Name=WP_000695387.1;Ontology_term=GO:0008643,GO:0055085,GO:0015144;gbkey=CDS;gene=malE;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000695396.1;locus_tag=AC56_RS01950;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;protein_id=WP_000695387.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	8766	9881	.	+	.	ID=gene-AC56_RS01945;Name=malK;gbkey=Gene;gene=malK;gene_biotype=protein_coding;locus_tag=AC56_RS01945;old_locus_tag=AC56_4510
NZ_JJLS01000294.1	Protein Homology	CDS	8766	9881	.	+	0	ID=cds-WP_000179165.1;Parent=gene-AC56_RS01945;Dbxref=GenBank:WP_000179165.1;Name=WP_000179165.1;Ontology_term=GO:0008643,GO:0055085,GO:0005524,GO:0140359,GO:0043190;gbkey=CDS;gene=malK;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011915502.1;locus_tag=AC56_RS01945;product=maltose/maltodextrin ABC transporter ATP-binding protein MalK;protein_id=WP_000179165.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	9953	11293	.	+	.	ID=gene-AC56_RS01940;Name=lamB;gbkey=Gene;gene=lamB;gene_biotype=protein_coding;locus_tag=AC56_RS01940;old_locus_tag=AC56_4511
NZ_JJLS01000294.1	Protein Homology	CDS	9953	11293	.	+	0	ID=cds-WP_000973658.1;Parent=gene-AC56_RS01940;Dbxref=GenBank:WP_000973658.1;Name=WP_000973658.1;gbkey=CDS;gene=lamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313046.1;locus_tag=AC56_RS01940;product=maltoporin LamB;protein_id=WP_000973658.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	11445	12365	.	+	.	ID=gene-AC56_RS01935;Name=malM;gbkey=Gene;gene=malM;gene_biotype=protein_coding;locus_tag=AC56_RS01935;old_locus_tag=AC56_4512
NZ_JJLS01000294.1	Protein Homology	CDS	11445	12365	.	+	0	ID=cds-WP_000783444.1;Parent=gene-AC56_RS01935;Dbxref=GenBank:WP_000783444.1;Name=WP_000783444.1;Ontology_term=GO:0008643,GO:0042597;gbkey=CDS;gene=malM;go_component=periplasmic space|0042597||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313047.1;locus_tag=AC56_RS01935;product=maltose operon protein MalM;protein_id=WP_000783444.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	pseudogene	12594	14173	.	+	.	ID=gene-AC56_RS01930;Name=AC56_RS01930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS01930;old_locus_tag=AC56_4515;pseudo=true
NZ_JJLS01000294.1	Protein Homology	CDS	12594	14173	.	+	0	ID=cds-AC56_RS01930;Parent=gene-AC56_RS01930;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579104.1;locus_tag=AC56_RS01930;product=SopA family protein;pseudo=true;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	14396	14893	.	+	.	ID=gene-AC56_RS01925;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=AC56_RS01925;old_locus_tag=AC56_4516
NZ_JJLS01000294.1	Protein Homology	CDS	14396	14893	.	+	0	ID=cds-WP_001295693.1;Parent=gene-AC56_RS01925;Dbxref=GenBank:WP_001295693.1;Name=WP_001295693.1;Ontology_term=GO:0008813;gbkey=CDS;gene=ubiC;go_function=chorismate lyase activity|0008813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709881.2;locus_tag=AC56_RS01925;product=chorismate lyase;protein_id=WP_001295693.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	14906	15778	.	+	.	ID=gene-AC56_RS01920;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=AC56_RS01920;old_locus_tag=AC56_4517
NZ_JJLS01000294.1	Protein Homology	CDS	14906	15778	.	+	0	ID=cds-WP_000455227.1;Parent=gene-AC56_RS01920;Dbxref=GenBank:WP_000455227.1;Name=WP_000455227.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate polyprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313050.1;locus_tag=AC56_RS01920;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_000455227.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	15933	18356	.	-	.	ID=gene-AC56_RS01915;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=AC56_RS01915;old_locus_tag=AC56_4518
NZ_JJLS01000294.1	Protein Homology	CDS	15933	18356	.	-	0	ID=cds-WP_001385068.1;Parent=gene-AC56_RS01915;Dbxref=GenBank:WP_001385068.1;Name=WP_001385068.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418465.4;locus_tag=AC56_RS01915;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WP_001385068.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	18527	18895	.	+	.	ID=gene-AC56_RS01910;Name=dgkA;gbkey=Gene;gene=dgkA;gene_biotype=protein_coding;locus_tag=AC56_RS01910;old_locus_tag=AC56_4519
NZ_JJLS01000294.1	Protein Homology	CDS	18527	18895	.	+	0	ID=cds-WP_000002907.1;Parent=gene-AC56_RS01910;Dbxref=GenBank:WP_000002907.1;Name=WP_000002907.1;gbkey=CDS;gene=dgkA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313052.1;locus_tag=AC56_RS01910;product=diacylglycerol kinase;protein_id=WP_000002907.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	19005	19613	.	+	.	ID=gene-AC56_RS01905;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=AC56_RS01905;old_locus_tag=AC56_4520
NZ_JJLS01000294.1	Protein Homology	CDS	19005	19613	.	+	0	ID=cds-WP_000646078.1;Parent=gene-AC56_RS01905;Dbxref=GenBank:WP_000646078.1;Name=WP_000646078.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646075.1;locus_tag=AC56_RS01905;product=transcriptional repressor LexA;protein_id=WP_000646078.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	19686	21011	.	+	.	ID=gene-AC56_RS01900;Name=dinF;gbkey=Gene;gene=dinF;gene_biotype=protein_coding;locus_tag=AC56_RS01900;old_locus_tag=AC56_4521
NZ_JJLS01000294.1	Protein Homology	CDS	19686	21011	.	+	0	ID=cds-WP_001301116.1;Parent=gene-AC56_RS01900;Dbxref=GenBank:WP_001301116.1;Name=WP_001301116.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;gene=dinF;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313054.4;locus_tag=AC56_RS01900;product=MATE family efflux transporter DinF;protein_id=WP_001301116.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	21127	21336	.	+	.	ID=gene-AC56_RS01895;Name=yjbJ;gbkey=Gene;gene=yjbJ;gene_biotype=protein_coding;locus_tag=AC56_RS01895;old_locus_tag=AC56_4522
NZ_JJLS01000294.1	Protein Homology	CDS	21127	21336	.	+	0	ID=cds-WP_001030593.1;Parent=gene-AC56_RS01895;Dbxref=GenBank:WP_001030593.1;Name=WP_001030593.1;gbkey=CDS;gene=yjbJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313055.1;locus_tag=AC56_RS01895;product=CsbD family protein;protein_id=WP_001030593.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	21378	21893	.	-	.	ID=gene-AC56_RS01890;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=AC56_RS01890;old_locus_tag=AC56_4523
NZ_JJLS01000294.1	Protein Homology	CDS	21378	21893	.	-	0	ID=cds-WP_001295691.1;Parent=gene-AC56_RS01890;Dbxref=GenBank:WP_001295691.1;Name=WP_001295691.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=zur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418470.4;locus_tag=AC56_RS01890;product=zinc uptake transcriptional repressor Zur;protein_id=WP_001295691.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	pseudogene	22212	23232	.	+	.	ID=gene-AC56_RS0127420;Name=AC56_RS0127420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0127420;pseudo=true
NZ_JJLS01000294.1	Protein Homology	CDS	22212	23232	.	+	0	ID=cds-AC56_RS0127420;Parent=gene-AC56_RS0127420;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_105478490.1;locus_tag=AC56_RS0127420;product=DUF2713 family protein;pseudo=true;transl_table=11
NZ_JJLS01000294.1	RefSeq	pseudogene	23595	23699	.	+	.	ID=gene-AC56_RS30515;Name=AC56_RS30515;end_range=23699,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS30515;old_locus_tag=AC56_4526;partial=true;pseudo=true
NZ_JJLS01000294.1	Protein Homology	CDS	23595	23699	.	+	0	ID=cds-AC56_RS30515;Parent=gene-AC56_RS30515;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=23699,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313058.1;locus_tag=AC56_RS30515;partial=true;product=tRNA-dihydrouridine synthase;pseudo=true;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	23953	24525	.	+	.	ID=gene-AC56_RS01880;Name=AC56_RS01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS01880;old_locus_tag=AC56_4527
NZ_JJLS01000294.1	Protein Homology	CDS	23953	24525	.	+	0	ID=cds-WP_000458584.1;Parent=gene-AC56_RS01880;Dbxref=GenBank:WP_000458584.1;Name=WP_000458584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458583.1;locus_tag=AC56_RS01880;product=Panacea domain-containing protein;protein_id=WP_000458584.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	24522	24941	.	+	.	ID=gene-AC56_RS0127425;Name=AC56_RS0127425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0127425
NZ_JJLS01000294.1	Protein Homology	CDS	24522	24941	.	+	0	ID=cds-WP_000133216.1;Parent=gene-AC56_RS0127425;Dbxref=GenBank:WP_000133216.1;Name=WP_000133216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000133216.1;locus_tag=AC56_RS0127425;product=hypothetical protein;protein_id=WP_000133216.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	24981	25154	.	+	.	ID=gene-AC56_RS33030;Name=AC56_RS33030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33030;old_locus_tag=AC56_4529
NZ_JJLS01000294.1	Protein Homology	CDS	24981	25154	.	+	0	ID=cds-WP_000390072.1;Parent=gene-AC56_RS33030;Dbxref=GenBank:WP_000390072.1;Name=WP_000390072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000654815.1;locus_tag=AC56_RS33030;product=hypothetical protein;protein_id=WP_000390072.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	25202	25483	.	-	.	ID=gene-AC56_RS0127430;Name=AC56_RS0127430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0127430
NZ_JJLS01000294.1	Protein Homology	CDS	25202	25483	.	-	0	ID=cds-WP_001093917.1;Parent=gene-AC56_RS0127430;Dbxref=GenBank:WP_001093917.1;Name=WP_001093917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001093916.1;locus_tag=AC56_RS0127430;product=pyocin activator PrtN family protein;protein_id=WP_001093917.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	25520	26092	.	-	.	ID=gene-AC56_RS01875;Name=AC56_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS01875;old_locus_tag=AC56_4531
NZ_JJLS01000294.1	Protein Homology	CDS	25520	26092	.	-	0	ID=cds-WP_001061348.1;Parent=gene-AC56_RS01875;Dbxref=GenBank:WP_001061348.1;Name=WP_001061348.1;Ontology_term=GO:0003676,GO:0008408;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001061350.1;locus_tag=AC56_RS01875;product=3'-5' exonuclease;protein_id=WP_001061348.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	26092	26901	.	-	.	ID=gene-AC56_RS01870;Name=AC56_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS01870;old_locus_tag=AC56_4532
NZ_JJLS01000294.1	Protein Homology	CDS	26092	26901	.	-	0	ID=cds-WP_000206745.1;Parent=gene-AC56_RS01870;Dbxref=GenBank:WP_000206745.1;Name=WP_000206745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000206748.1;locus_tag=AC56_RS01870;product=hypothetical protein;protein_id=WP_000206745.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	26901	27263	.	-	.	ID=gene-AC56_RS01865;Name=AC56_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS01865;old_locus_tag=AC56_4533
NZ_JJLS01000294.1	Protein Homology	CDS	26901	27263	.	-	0	ID=cds-WP_001565177.1;Parent=gene-AC56_RS01865;Dbxref=GenBank:WP_001565177.1;Name=WP_001565177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416863.1;locus_tag=AC56_RS01865;product=phage protein;protein_id=WP_001565177.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	27254	27790	.	-	.	ID=gene-AC56_RS01860;Name=yfdR;gbkey=Gene;gene=yfdR;gene_biotype=protein_coding;locus_tag=AC56_RS01860;old_locus_tag=AC56_4534
NZ_JJLS01000294.1	Protein Homology	CDS	27254	27790	.	-	0	ID=cds-WP_000008210.1;Parent=gene-AC56_RS01860;Dbxref=GenBank:WP_000008210.1;Name=WP_000008210.1;gbkey=CDS;gene=yfdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416862.2;locus_tag=AC56_RS01860;product=5'-deoxynucleotidase;protein_id=WP_000008210.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	27918	28742	.	-	.	ID=gene-AC56_RS01855;Name=yfdQ;gbkey=Gene;gene=yfdQ;gene_biotype=protein_coding;locus_tag=AC56_RS01855;old_locus_tag=AC56_4535
NZ_JJLS01000294.1	Protein Homology	CDS	27918	28742	.	-	0	ID=cds-WP_001569327.1;Parent=gene-AC56_RS01855;Dbxref=GenBank:WP_001569327.1;Name=WP_001569327.1;gbkey=CDS;gene=yfdQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416861.1;locus_tag=AC56_RS01855;product=YfdQ family protein;protein_id=WP_001569327.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	28808	29170	.	-	.	ID=gene-AC56_RS01850;Name=yfdP;gbkey=Gene;gene=yfdP;gene_biotype=protein_coding;locus_tag=AC56_RS01850;old_locus_tag=AC56_4536
NZ_JJLS01000294.1	Protein Homology	CDS	28808	29170	.	-	0	ID=cds-WP_000135691.1;Parent=gene-AC56_RS01850;Dbxref=GenBank:WP_000135691.1;Name=WP_000135691.1;gbkey=CDS;gene=yfdP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416860.4;locus_tag=AC56_RS01850;product=protein YfdP;protein_id=WP_000135691.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	29873	30565	.	-	.	ID=gene-AC56_RS01845;Name=AC56_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS01845;old_locus_tag=AC56_4537
NZ_JJLS01000294.1	Protein Homology	CDS	29873	30565	.	-	0	ID=cds-WP_001345148.1;Parent=gene-AC56_RS01845;Dbxref=GenBank:WP_001345148.1;Name=WP_001345148.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001358750.1;locus_tag=AC56_RS01845;product=XRE family transcriptional regulator;protein_id=WP_001345148.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	30663	30923	.	+	.	ID=gene-AC56_RS01840;Name=AC56_RS01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS01840;old_locus_tag=AC56_4538
NZ_JJLS01000294.1	Protein Homology	CDS	30663	30923	.	+	0	ID=cds-WP_001191669.1;Parent=gene-AC56_RS01840;Dbxref=GenBank:WP_001191669.1;Name=WP_001191669.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001191680.1;locus_tag=AC56_RS01840;product=helix-turn-helix domain-containing protein;protein_id=WP_001191669.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	30916	31467	.	+	.	ID=gene-AC56_RS01835;Name=ymfL;gbkey=Gene;gene=ymfL;gene_biotype=protein_coding;locus_tag=AC56_RS01835;old_locus_tag=AC56_4539
NZ_JJLS01000294.1	Protein Homology	CDS	30916	31467	.	+	0	ID=cds-WP_032279270.1;Parent=gene-AC56_RS01835;Dbxref=GenBank:WP_032279270.1;Name=WP_032279270.1;gbkey=CDS;gene=ymfL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415665.2;locus_tag=AC56_RS01835;product=protein YmfL;protein_id=WP_032279270.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	31643	31855	.	+	.	ID=gene-AC56_RS30530;Name=AC56_RS30530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS30530
NZ_JJLS01000294.1	Protein Homology	CDS	31643	31855	.	+	0	ID=cds-WP_001250270.1;Parent=gene-AC56_RS30530;Dbxref=GenBank:WP_001250270.1;Name=WP_001250270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001761574.1;locus_tag=AC56_RS30530;product=DUF4222 domain-containing protein;protein_id=WP_001250270.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	31812	32804	.	+	.	ID=gene-AC56_RS33035;Name=AC56_RS33035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33035
NZ_JJLS01000294.1	Protein Homology	CDS	31812	32804	.	+	0	ID=cds-WP_024224482.1;Parent=gene-AC56_RS33035;Dbxref=GenBank:WP_024224482.1;Name=WP_024224482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001373617.1;locus_tag=AC56_RS33035;product=hypothetical protein;protein_id=WP_024224482.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	32801	33295	.	+	.	ID=gene-AC56_RS0127450;Name=yfdN;gbkey=Gene;gene=yfdN;gene_biotype=protein_coding;locus_tag=AC56_RS0127450
NZ_JJLS01000294.1	Protein Homology	CDS	32801	33295	.	+	0	ID=cds-WP_072126958.1;Parent=gene-AC56_RS0127450;Dbxref=GenBank:WP_072126958.1;Name=WP_072126958.1;gbkey=CDS;gene=yfdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416858.1;locus_tag=AC56_RS0127450;product=PerC family transcriptional regulator;protein_id=WP_072126958.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	33295	33948	.	+	.	ID=gene-AC56_RS01830;Name=AC56_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS01830;old_locus_tag=AC56_4542
NZ_JJLS01000294.1	Protein Homology	CDS	33295	33948	.	+	0	ID=cds-WP_024249645.1;Parent=gene-AC56_RS01830;Dbxref=GenBank:WP_024249645.1;Name=WP_024249645.1;Ontology_term=GO:0009307,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001378271.1;locus_tag=AC56_RS01830;product=phage N-6-adenine-methyltransferase;protein_id=WP_024249645.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	33945	34271	.	+	.	ID=gene-AC56_RS01825;Name=AC56_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS01825;old_locus_tag=AC56_4543
NZ_JJLS01000294.1	Protein Homology	CDS	33945	34271	.	+	0	ID=cds-WP_000210155.1;Parent=gene-AC56_RS01825;Dbxref=GenBank:WP_000210155.1;Name=WP_000210155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003878599.1;locus_tag=AC56_RS01825;product=LexA family transcriptional regulator;protein_id=WP_000210155.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	34268	34657	.	+	.	ID=gene-AC56_RS0127455;Name=AC56_RS0127455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0127455
NZ_JJLS01000294.1	Protein Homology	CDS	34268	34657	.	+	0	ID=cds-WP_032279272.1;Parent=gene-AC56_RS0127455;Dbxref=GenBank:WP_032279272.1;Name=WP_032279272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000767134.1;locus_tag=AC56_RS0127455;product=RusA family crossover junction endodeoxyribonuclease;protein_id=WP_032279272.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	34677	35486	.	+	.	ID=gene-AC56_RS01820;Name=AC56_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS01820;old_locus_tag=AC56_4545
NZ_JJLS01000294.1	Protein Homology	CDS	34677	35486	.	+	0	ID=cds-WP_001061444.1;Parent=gene-AC56_RS01820;Dbxref=GenBank:WP_001061444.1;Name=WP_001061444.1;Ontology_term=GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001061418.1;locus_tag=AC56_RS01820;product=KilA-N domain-containing protein;protein_id=WP_001061444.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	35494	36483	.	+	.	ID=gene-AC56_RS01815;Name=AC56_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS01815;old_locus_tag=AC56_4546
NZ_JJLS01000294.1	Protein Homology	CDS	35494	36483	.	+	0	ID=cds-WP_032279273.1;Parent=gene-AC56_RS01815;Dbxref=GenBank:WP_032279273.1;Name=WP_032279273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001764249.1;locus_tag=AC56_RS01815;product=DUF968 domain-containing protein;protein_id=WP_032279273.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	36497	37249	.	+	.	ID=gene-AC56_RS01810;Name=AC56_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS01810;old_locus_tag=AC56_4547
NZ_JJLS01000294.1	Protein Homology	CDS	36497	37249	.	+	0	ID=cds-WP_032279275.1;Parent=gene-AC56_RS01810;Dbxref=GenBank:WP_032279275.1;Name=WP_032279275.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416077.4;locus_tag=AC56_RS01810;product=antitermination protein;protein_id=WP_032279275.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	37502	37705	.	+	.	ID=gene-AC56_RS0127460;Name=AC56_RS0127460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0127460
NZ_JJLS01000294.1	Protein Homology	CDS	37502	37705	.	+	0	ID=cds-WP_000917724.1;Parent=gene-AC56_RS0127460;Dbxref=GenBank:WP_000917724.1;Name=WP_000917724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000917730.1;locus_tag=AC56_RS0127460;product=hypothetical protein;protein_id=WP_000917724.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	37856	38908	.	+	.	ID=gene-AC56_RS01805;Name=AC56_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS01805;old_locus_tag=AC56_4549
NZ_JJLS01000294.1	Protein Homology	CDS	37856	38908	.	+	0	ID=cds-WP_032279276.1;Parent=gene-AC56_RS01805;Dbxref=GenBank:WP_032279276.1;Name=WP_032279276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000799668.1;locus_tag=AC56_RS01805;product=DNA-methyltransferase;protein_id=WP_032279276.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	38985	39320	.	+	.	ID=gene-AC56_RS01800;Name=AC56_RS01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS01800;old_locus_tag=AC56_4550
NZ_JJLS01000294.1	Protein Homology	CDS	38985	39320	.	+	0	ID=cds-WP_001120502.1;Parent=gene-AC56_RS01800;Dbxref=GenBank:WP_001120502.1;Name=WP_001120502.1;Ontology_term=GO:0019835;gbkey=CDS;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001120497.1;locus_tag=AC56_RS01800;product=phage holin%2C lambda family;protein_id=WP_001120502.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	39324	39800	.	+	.	ID=gene-AC56_RS01795;Name=AC56_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS01795;old_locus_tag=AC56_4551
NZ_JJLS01000294.1	Protein Homology	CDS	39324	39800	.	+	0	ID=cds-WP_016244989.1;Parent=gene-AC56_RS01795;Dbxref=GenBank:WP_016244989.1;Name=WP_016244989.1;Ontology_term=GO:0005975,GO:0003796,GO:0004553;gbkey=CDS;go_function=lysozyme activity|0003796||IEA,hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309649.1;locus_tag=AC56_RS01795;product=glycoside hydrolase family 24 protein;protein_id=WP_016244989.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	39995	40333	.	+	.	ID=gene-AC56_RS33975;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=AC56_RS33975
NZ_JJLS01000294.1	Protein Homology	CDS	39995	40333	.	+	0	ID=cds-WP_420209736.1;Parent=gene-AC56_RS33975;Dbxref=GenBank:WP_420209736.1;Name=WP_420209736.1;gbkey=CDS;gene=lysC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001603269.1;locus_tag=AC56_RS33975;product=Rz1-like lysis system protein LysC;protein_id=WP_420209736.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	40360	40710	.	+	.	ID=gene-AC56_RS01785;Name=AC56_RS01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS01785;old_locus_tag=AC56_4554
NZ_JJLS01000294.1	Protein Homology	CDS	40360	40710	.	+	0	ID=cds-WP_032172868.1;Parent=gene-AC56_RS01785;Dbxref=GenBank:WP_032172868.1;Name=WP_032172868.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001135225.1;locus_tag=AC56_RS01785;product=HNH endonuclease;protein_id=WP_032172868.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	40836	41321	.	+	.	ID=gene-AC56_RS01780;Name=AC56_RS01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS01780;old_locus_tag=AC56_4555
NZ_JJLS01000294.1	Protein Homology	CDS	40836	41321	.	+	0	ID=cds-WP_000929174.1;Parent=gene-AC56_RS01780;Dbxref=GenBank:WP_000929174.1;Name=WP_000929174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001569331.1;locus_tag=AC56_RS01780;product=phage terminase small subunit P27 family;protein_id=WP_000929174.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	41335	43068	.	+	.	ID=gene-AC56_RS01775;Name=AC56_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS01775;old_locus_tag=AC56_4557
NZ_JJLS01000294.1	Protein Homology	CDS	41335	43068	.	+	0	ID=cds-WP_000088153.1;Parent=gene-AC56_RS01775;Dbxref=GenBank:WP_000088153.1;Name=WP_000088153.1;Ontology_term=GO:0004519,GO:0005524,GO:0140657;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP binding|0005524||IEA,ATP-dependent activity|0140657||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000088170.1;locus_tag=AC56_RS01775;product=terminase large subunit;protein_id=WP_000088153.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	43080	43262	.	+	.	ID=gene-AC56_RS01770;Name=ymfR;gbkey=Gene;gene=ymfR;gene_biotype=protein_coding;locus_tag=AC56_RS01770;old_locus_tag=AC56_4558
NZ_JJLS01000294.1	Protein Homology	CDS	43080	43262	.	+	0	ID=cds-WP_000605604.1;Parent=gene-AC56_RS01770;Dbxref=GenBank:WP_000605604.1;Name=WP_000605604.1;gbkey=CDS;gene=ymfR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415668.1;locus_tag=AC56_RS01770;product=protein YmfR;protein_id=WP_000605604.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	43262	44503	.	+	.	ID=gene-AC56_RS01765;Name=AC56_RS01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS01765;old_locus_tag=AC56_4559
NZ_JJLS01000294.1	Protein Homology	CDS	43262	44503	.	+	0	ID=cds-WP_000466250.1;Parent=gene-AC56_RS01765;Dbxref=GenBank:WP_000466250.1;Name=WP_000466250.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000466237.1;locus_tag=AC56_RS01765;product=phage portal protein;protein_id=WP_000466250.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	44481	45131	.	+	.	ID=gene-AC56_RS01760;Name=AC56_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS01760;old_locus_tag=AC56_4560
NZ_JJLS01000294.1	Protein Homology	CDS	44481	45131	.	+	0	ID=cds-WP_001193632.1;Parent=gene-AC56_RS01760;Dbxref=GenBank:WP_001193632.1;Name=WP_001193632.1;Ontology_term=GO:0019068,GO:0019082,GO:0005198,GO:0008233;gbkey=CDS;go_function=structural molecule activity|0005198||IEA,peptidase activity|0008233||IEA;go_process=virion assembly|0019068||IEA,viral protein processing|0019082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001193639.1;locus_tag=AC56_RS01760;product=HK97 family phage prohead protease;protein_id=WP_001193632.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	45146	46351	.	+	.	ID=gene-AC56_RS01755;Name=AC56_RS01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS01755;old_locus_tag=AC56_4561
NZ_JJLS01000294.1	Protein Homology	CDS	45146	46351	.	+	0	ID=cds-WP_000257507.1;Parent=gene-AC56_RS01755;Dbxref=GenBank:WP_000257507.1;Name=WP_000257507.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559678.1;locus_tag=AC56_RS01755;product=phage major capsid protein;protein_id=WP_000257507.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	46401	46601	.	+	.	ID=gene-AC56_RS01750;Name=AC56_RS01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS01750;old_locus_tag=AC56_4562
NZ_JJLS01000294.1	Protein Homology	CDS	46401	46601	.	+	0	ID=cds-WP_000601360.1;Parent=gene-AC56_RS01750;Dbxref=GenBank:WP_000601360.1;Name=WP_000601360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001735262.1;locus_tag=AC56_RS01750;product=hypothetical protein;protein_id=WP_000601360.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	46604	46927	.	+	.	ID=gene-AC56_RS01745;Name=AC56_RS01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS01745;old_locus_tag=AC56_4563
NZ_JJLS01000294.1	Protein Homology	CDS	46604	46927	.	+	0	ID=cds-WP_000927719.1;Parent=gene-AC56_RS01745;Dbxref=GenBank:WP_000927719.1;Name=WP_000927719.1;Ontology_term=GO:0016032;gbkey=CDS;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001492759.1;locus_tag=AC56_RS01745;product=head-tail connector protein;protein_id=WP_000927719.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	46924	47334	.	+	.	ID=gene-AC56_RS01740;Name=AC56_RS01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS01740;old_locus_tag=AC56_4564
NZ_JJLS01000294.1	Protein Homology	CDS	46924	47334	.	+	0	ID=cds-WP_000702401.1;Parent=gene-AC56_RS01740;Dbxref=GenBank:WP_000702401.1;Name=WP_000702401.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000702387.1;locus_tag=AC56_RS01740;product=phage head closure protein;protein_id=WP_000702401.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	47309	47815	.	+	.	ID=gene-AC56_RS01735;Name=AC56_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS01735;old_locus_tag=AC56_4565
NZ_JJLS01000294.1	Protein Homology	CDS	47309	47815	.	+	0	ID=cds-WP_000224835.1;Parent=gene-AC56_RS01735;Dbxref=GenBank:WP_000224835.1;Name=WP_000224835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001501060.1;locus_tag=AC56_RS01735;product=hypothetical protein;protein_id=WP_000224835.1;transl_table=11
NZ_JJLS01000294.1	RefSeq	gene	47812	48107	.	+	.	ID=gene-AC56_RS01730;Name=AC56_RS01730;end_range=48107,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS01730;old_locus_tag=AC56_4566;partial=true
NZ_JJLS01000294.1	Protein Homology	CDS	47812	48107	.	+	0	ID=cds-WP_032279281.1;Parent=gene-AC56_RS01730;Dbxref=GenBank:WP_032279281.1;Name=WP_032279281.1;end_range=48107,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016244984.1;locus_tag=AC56_RS01730;partial=true;product=phage tail terminator protein;protein_id=WP_032279281.1;transl_table=11
##sequence-region NZ_JJLS01000295.1 1 2196
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000295.1	RefSeq	region	1	2196	.	+	.	ID=NZ_JJLS01000295.1:1..2196;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000295.1	RefSeq	pseudogene	1	515	.	+	.	ID=gene-AC56_RS01725;Name=AC56_RS01725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS01725;old_locus_tag=AC56_4567;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000295.1	Protein Homology	CDS	1	515	.	+	0	ID=cds-AC56_RS01725;Parent=gene-AC56_RS01725;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS01725;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000295.1	RefSeq	pseudogene	577	799	.	-	.	ID=gene-AC56_RS01720;Name=AC56_RS01720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS01720;old_locus_tag=AC56_4568;pseudo=true
NZ_JJLS01000295.1	Protein Homology	CDS	577	799	.	-	0	ID=cds-AC56_RS01720;Parent=gene-AC56_RS01720;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165333.1;locus_tag=AC56_RS01720;product=hypothetical protein;pseudo=true;transl_table=11
NZ_JJLS01000295.1	RefSeq	pseudogene	1201	1674	.	+	.	ID=gene-AC56_RS01715;Name=aphA;end_range=1674,.;gbkey=Gene;gene=aphA;gene_biotype=pseudogene;locus_tag=AC56_RS01715;old_locus_tag=AC56_4569;partial=true;pseudo=true
NZ_JJLS01000295.1	Protein Homology	CDS	1201	1674	.	+	0	ID=cds-AC56_RS01715;Parent=gene-AC56_RS01715;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003993,GO:0030288;end_range=1674,.;gbkey=CDS;gene=aphA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=acid phosphatase activity|0003993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418479.1;locus_tag=AC56_RS01715;partial=true;product=acid phosphatase AphA;pseudo=true;transl_table=11
NZ_JJLS01000295.1	RefSeq	pseudogene	1689	2196	.	-	.	ID=gene-AC56_RS01710;Name=AC56_RS01710;end_range=2196,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS01710;old_locus_tag=AC56_4570;partial=true;pseudo=true
NZ_JJLS01000295.1	Protein Homology	CDS	1689	2196	.	-	2	ID=cds-AC56_RS01710;Parent=gene-AC56_RS01710;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0004803;end_range=2196,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS01710;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000296.1 1 34732
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000296.1	RefSeq	region	1	34732	.	+	.	ID=NZ_JJLS01000296.1:1..34732;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000296.1	RefSeq	pseudogene	1	362	.	-	.	ID=gene-AC56_RS0127465;Name=AC56_RS0127465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0127465;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000296.1	Protein Homology	CDS	1	362	.	-	0	ID=cds-AC56_RS0127465;Parent=gene-AC56_RS0127465;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS0127465;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000296.1	RefSeq	pseudogene	417	668	.	+	.	ID=gene-AC56_RS33620;Name=AC56_RS33620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33620;old_locus_tag=AC56_4572;partial=true;pseudo=true;start_range=.,417
NZ_JJLS01000296.1	Protein Homology	CDS	417	668	.	+	0	ID=cds-AC56_RS33620;Parent=gene-AC56_RS33620;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418479.1;locus_tag=AC56_RS33620;partial=true;product=HAD family acid phosphatase;pseudo=true;start_range=.,417;transl_table=11
NZ_JJLS01000296.1	RefSeq	gene	779	1195	.	+	.	ID=gene-AC56_RS01705;Name=yjbQ;gbkey=Gene;gene=yjbQ;gene_biotype=protein_coding;locus_tag=AC56_RS01705;old_locus_tag=AC56_4573
NZ_JJLS01000296.1	Protein Homology	CDS	779	1195	.	+	0	ID=cds-WP_000270375.1;Parent=gene-AC56_RS01705;Dbxref=GenBank:WP_000270375.1;Name=WP_000270375.1;Ontology_term=GO:0003824,GO:0005737;gbkey=CDS;gene=yjbQ;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313065.1;locus_tag=AC56_RS01705;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WP_000270375.1;transl_table=11
NZ_JJLS01000296.1	RefSeq	gene	1199	1555	.	+	.	ID=gene-AC56_RS01700;Name=yjbR;gbkey=Gene;gene=yjbR;gene_biotype=protein_coding;locus_tag=AC56_RS01700;old_locus_tag=AC56_4574
NZ_JJLS01000296.1	Protein Homology	CDS	1199	1555	.	+	0	ID=cds-WP_000155657.1;Parent=gene-AC56_RS01700;Dbxref=GenBank:WP_000155657.1;Name=WP_000155657.1;Ontology_term=GO:0003677;gbkey=CDS;gene=yjbR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313066.1;locus_tag=AC56_RS01700;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000155657.1;transl_table=11
NZ_JJLS01000296.1	RefSeq	gene	1590	4412	.	-	.	ID=gene-AC56_RS01695;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=AC56_RS01695;old_locus_tag=AC56_4575
NZ_JJLS01000296.1	Protein Homology	CDS	1590	4412	.	-	0	ID=cds-WP_000357740.1;Parent=gene-AC56_RS01695;Dbxref=GenBank:WP_000357740.1;Name=WP_000357740.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418482.1;locus_tag=AC56_RS01695;product=excinuclease ABC subunit UvrA;protein_id=WP_000357740.1;transl_table=11
NZ_JJLS01000296.1	RefSeq	gene	4667	5203	.	+	.	ID=gene-AC56_RS01690;Name=ssb1;gbkey=Gene;gene=ssb1;gene_biotype=protein_coding;locus_tag=AC56_RS01690;old_locus_tag=AC56_4576
NZ_JJLS01000296.1	Protein Homology	CDS	4667	5203	.	+	0	ID=cds-WP_000168305.1;Parent=gene-AC56_RS01690;Dbxref=GenBank:WP_000168305.1;Name=WP_000168305.1;gbkey=CDS;gene=ssb1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313068.1;locus_tag=AC56_RS01690;product=single-stranded DNA-binding protein SSB1;protein_id=WP_000168305.1;transl_table=11
NZ_JJLS01000296.1	RefSeq	gene	5302	5583	.	-	.	ID=gene-AC56_RS01685;Name=yjcB;gbkey=Gene;gene=yjcB;gene_biotype=protein_coding;locus_tag=AC56_RS01685;old_locus_tag=AC56_4577
NZ_JJLS01000296.1	Protein Homology	CDS	5302	5583	.	-	0	ID=cds-WP_001295689.1;Parent=gene-AC56_RS01685;Dbxref=GenBank:WP_001295689.1;Name=WP_001295689.1;gbkey=CDS;gene=yjcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313069.2;locus_tag=AC56_RS01685;product=YjcB family protein;protein_id=WP_001295689.1;transl_table=11
NZ_JJLS01000296.1	RefSeq	gene	6013	7599	.	+	.	ID=gene-AC56_RS01680;Name=pdeC;gbkey=Gene;gene=pdeC;gene_biotype=protein_coding;locus_tag=AC56_RS01680;old_locus_tag=AC56_4578
NZ_JJLS01000296.1	Protein Homology	CDS	6013	7599	.	+	0	ID=cds-WP_000019548.1;Parent=gene-AC56_RS01680;Dbxref=GenBank:WP_000019548.1;Name=WP_000019548.1;gbkey=CDS;gene=pdeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418485.1;locus_tag=AC56_RS01680;product=c-di-GMP phosphodiesterase PdeC;protein_id=WP_000019548.1;transl_table=11
NZ_JJLS01000296.1	RefSeq	gene	7602	7925	.	-	.	ID=gene-AC56_RS01675;Name=soxS;gbkey=Gene;gene=soxS;gene_biotype=protein_coding;locus_tag=AC56_RS01675;old_locus_tag=AC56_4579
NZ_JJLS01000296.1	Protein Homology	CDS	7602	7925	.	-	0	ID=cds-WP_000019358.1;Parent=gene-AC56_RS01675;Dbxref=GenBank:WP_000019358.1;Name=WP_000019358.1;gbkey=CDS;gene=soxS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313071.1;locus_tag=AC56_RS01675;product=superoxide response transcriptional regulator SoxS;protein_id=WP_000019358.1;transl_table=11
NZ_JJLS01000296.1	RefSeq	gene	8011	8475	.	+	.	ID=gene-AC56_RS01670;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;locus_tag=AC56_RS01670;old_locus_tag=AC56_4580
NZ_JJLS01000296.1	Protein Homology	CDS	8011	8475	.	+	0	ID=cds-WP_000412428.1;Parent=gene-AC56_RS01670;Dbxref=GenBank:WP_000412428.1;Name=WP_000412428.1;Ontology_term=GO:0006355,GO:0006979,GO:0003700,GO:0051537;gbkey=CDS;gene=soxR;go_function=DNA-binding transcription factor activity|0003700||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313072.1;locus_tag=AC56_RS01670;product=redox-sensitive transcriptional activator SoxR;protein_id=WP_000412428.1;transl_table=11
NZ_JJLS01000296.1	RefSeq	gene	9021	10370	.	+	.	ID=gene-AC56_RS01665;Name=ghxP;gbkey=Gene;gene=ghxP;gene_biotype=protein_coding;gene_synonym=yjcD;locus_tag=AC56_RS01665;old_locus_tag=AC56_4582
NZ_JJLS01000296.1	Protein Homology	CDS	9021	10370	.	+	0	ID=cds-WP_000106882.1;Parent=gene-AC56_RS01665;Dbxref=GenBank:WP_000106882.1;Name=WP_000106882.1;gbkey=CDS;gene=ghxP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132609.1;locus_tag=AC56_RS01665;product=guanine/hypoxanthine transporter GhxP;protein_id=WP_000106882.1;transl_table=11
NZ_JJLS01000296.1	RefSeq	gene	10522	12171	.	+	.	ID=gene-AC56_RS01660;Name=yjcE;gbkey=Gene;gene=yjcE;gene_biotype=protein_coding;locus_tag=AC56_RS01660;old_locus_tag=AC56_4584
NZ_JJLS01000296.1	Protein Homology	CDS	10522	12171	.	+	0	ID=cds-WP_000402207.1;Parent=gene-AC56_RS01660;Dbxref=GenBank:WP_000402207.1;Name=WP_000402207.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385,GO:0016020;gbkey=CDS;gene=yjcE;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313074.1;locus_tag=AC56_RS01660;product=Na+/H+ antiporter;protein_id=WP_000402207.1;transl_table=11
NZ_JJLS01000296.1	RefSeq	gene	12325	13617	.	-	.	ID=gene-AC56_RS01655;Name=espX5;gbkey=Gene;gene=espX5;gene_biotype=protein_coding;locus_tag=AC56_RS01655;old_locus_tag=AC56_4585
NZ_JJLS01000296.1	Protein Homology	CDS	12325	13617	.	-	0	ID=cds-WP_032279289.1;Parent=gene-AC56_RS01655;Dbxref=GenBank:WP_032279289.1;Name=WP_032279289.1;gbkey=CDS;gene=espX5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418490.1;locus_tag=AC56_RS01655;product=T3SS effector pentapeptide repeat protein EspX5;protein_id=WP_032279289.1;transl_table=11
NZ_JJLS01000296.1	RefSeq	gene	13795	15444	.	-	.	ID=gene-AC56_RS01650;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=AC56_RS01650;old_locus_tag=AC56_4586
NZ_JJLS01000296.1	Protein Homology	CDS	13795	15444	.	-	0	ID=cds-WP_032279290.1;Parent=gene-AC56_RS01650;Dbxref=GenBank:WP_032279290.1;Name=WP_032279290.1;Ontology_term=GO:0006814,GO:0015123,GO:0015370,GO:0031402,GO:0005886;gbkey=CDS;gene=actP;go_component=plasma membrane|0005886||IEA;go_function=acetate transmembrane transporter activity|0015123||IEA,solute:sodium symporter activity|0015370||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418491.1;locus_tag=AC56_RS01650;product=cation/acetate symporter ActP;protein_id=WP_032279290.1;transl_table=11
NZ_JJLS01000296.1	RefSeq	gene	15441	15755	.	-	.	ID=gene-AC56_RS01645;Name=yjcH;gbkey=Gene;gene=yjcH;gene_biotype=protein_coding;locus_tag=AC56_RS01645;old_locus_tag=AC56_4587
NZ_JJLS01000296.1	Protein Homology	CDS	15441	15755	.	-	0	ID=cds-WP_001014565.1;Parent=gene-AC56_RS01645;Dbxref=GenBank:WP_001014565.1;Name=WP_001014565.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yjcH;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418492.1;locus_tag=AC56_RS01645;product=DUF485 domain-containing protein;protein_id=WP_001014565.1;transl_table=11
NZ_JJLS01000296.1	RefSeq	gene	15955	17913	.	-	.	ID=gene-AC56_RS01640;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=AC56_RS01640;old_locus_tag=AC56_4588
NZ_JJLS01000296.1	Protein Homology	CDS	15955	17913	.	-	0	ID=cds-WP_000078209.1;Parent=gene-AC56_RS01640;Dbxref=GenBank:WP_000078209.1;Name=WP_000078209.1;Ontology_term=GO:0019427,GO:0003987,GO:0016208;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA,AMP binding|0016208||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418493.1;locus_tag=AC56_RS01640;product=acetate--CoA ligase;protein_id=WP_000078209.1;transl_table=11
NZ_JJLS01000296.1	RefSeq	gene	18306	19742	.	+	.	ID=gene-AC56_RS01635;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;locus_tag=AC56_RS01635;old_locus_tag=AC56_4589
NZ_JJLS01000296.1	Protein Homology	CDS	18306	19742	.	+	0	ID=cds-WP_032279291.1;Parent=gene-AC56_RS01635;Dbxref=GenBank:WP_032279291.1;Name=WP_032279291.1;Ontology_term=GO:0008152,GO:0005509,GO:0020037,GO:0042279,GO:0042597;gbkey=CDS;gene=nrfA;go_component=periplasmic space|0042597||IEA;go_function=calcium ion binding|0005509||IEA,heme binding|0020037||IEA,nitrite reductase (cytochrome%2C ammonia-forming) activity|0042279||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313079.1;locus_tag=AC56_RS01635;product=ammonia-forming nitrite reductase cytochrome c552 subunit;protein_id=WP_032279291.1;transl_table=11
NZ_JJLS01000296.1	RefSeq	gene	19787	20353	.	+	.	ID=gene-AC56_RS01630;Name=nrfB;gbkey=Gene;gene=nrfB;gene_biotype=protein_coding;locus_tag=AC56_RS01630;old_locus_tag=AC56_4590
NZ_JJLS01000296.1	Protein Homology	CDS	19787	20353	.	+	0	ID=cds-WP_001295391.1;Parent=gene-AC56_RS01630;Dbxref=GenBank:WP_001295391.1;Name=WP_001295391.1;Ontology_term=GO:0008152,GO:0042597;gbkey=CDS;gene=nrfB;go_component=periplasmic space|0042597||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418495.2;locus_tag=AC56_RS01630;product=cytochrome c nitrite reductase pentaheme subunit;protein_id=WP_001295391.1;transl_table=11
NZ_JJLS01000296.1	RefSeq	gene	20350	21021	.	+	.	ID=gene-AC56_RS01625;Name=nrfC;gbkey=Gene;gene=nrfC;gene_biotype=protein_coding;locus_tag=AC56_RS01625;old_locus_tag=AC56_4591
NZ_JJLS01000296.1	Protein Homology	CDS	20350	21021	.	+	0	ID=cds-WP_000220296.1;Parent=gene-AC56_RS01625;Dbxref=GenBank:WP_000220296.1;Name=WP_000220296.1;gbkey=CDS;gene=nrfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313081.1;locus_tag=AC56_RS01625;product=cytochrome c nitrite reductase Fe-S protein;protein_id=WP_000220296.1;transl_table=11
NZ_JJLS01000296.1	RefSeq	gene	21018	21974	.	+	.	ID=gene-AC56_RS01620;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=AC56_RS01620;old_locus_tag=AC56_4592
NZ_JJLS01000296.1	Protein Homology	CDS	21018	21974	.	+	0	ID=cds-WP_000195154.1;Parent=gene-AC56_RS01620;Dbxref=GenBank:WP_000195154.1;Name=WP_000195154.1;gbkey=CDS;gene=nrfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418497.1;locus_tag=AC56_RS01620;product=cytochrome c nitrite reductase subunit NrfD;protein_id=WP_000195154.1;transl_table=11
NZ_JJLS01000296.1	RefSeq	gene	21994	23712	.	+	.	ID=gene-AC56_RS01615;Name=nrfE;gbkey=Gene;gene=nrfE;gene_biotype=protein_coding;locus_tag=AC56_RS01615;old_locus_tag=AC56_4593
NZ_JJLS01000296.1	Protein Homology	CDS	21994	23712	.	+	0	ID=cds-WP_071998977.1;Parent=gene-AC56_RS01615;Dbxref=GenBank:WP_071998977.1;Name=WP_071998977.1;gbkey=CDS;gene=nrfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014640253.1;locus_tag=AC56_RS01615;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_071998977.1;transl_table=11
NZ_JJLS01000296.1	RefSeq	gene	23705	24088	.	+	.	ID=gene-AC56_RS01610;Name=nrfF;gbkey=Gene;gene=nrfF;gene_biotype=protein_coding;locus_tag=AC56_RS01610;old_locus_tag=AC56_4594
NZ_JJLS01000296.1	Protein Homology	CDS	23705	24088	.	+	0	ID=cds-WP_000033487.1;Parent=gene-AC56_RS01610;Dbxref=GenBank:WP_000033487.1;Name=WP_000033487.1;gbkey=CDS;gene=nrfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313084.1;locus_tag=AC56_RS01610;product=heme lyase NrfEFG subunit NrfF;protein_id=WP_000033487.1;transl_table=11
NZ_JJLS01000296.1	RefSeq	gene	24085	24681	.	+	.	ID=gene-AC56_RS01605;Name=nrfG;gbkey=Gene;gene=nrfG;gene_biotype=protein_coding;locus_tag=AC56_RS01605;old_locus_tag=AC56_4595
NZ_JJLS01000296.1	Protein Homology	CDS	24085	24681	.	+	0	ID=cds-WP_000812892.1;Parent=gene-AC56_RS01605;Dbxref=GenBank:WP_000812892.1;Name=WP_000812892.1;gbkey=CDS;gene=nrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709852.1;locus_tag=AC56_RS01605;product=heme lyase NrfEFG subunit NrfG;protein_id=WP_000812892.1;transl_table=11
NZ_JJLS01000296.1	RefSeq	gene	25023	26336	.	+	.	ID=gene-AC56_RS01600;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;locus_tag=AC56_RS01600;old_locus_tag=AC56_4597
NZ_JJLS01000296.1	Protein Homology	CDS	25023	26336	.	+	0	ID=cds-WP_000835799.1;Parent=gene-AC56_RS01600;Dbxref=GenBank:WP_000835799.1;Name=WP_000835799.1;Ontology_term=GO:0006835,GO:0015293,GO:0016020;gbkey=CDS;gene=gltP;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313086.1;locus_tag=AC56_RS01600;product=glutamate/aspartate:proton symporter GltP;protein_id=WP_000835799.1;transl_table=11
NZ_JJLS01000296.1	RefSeq	gene	26527	27216	.	-	.	ID=gene-AC56_RS01595;Name=yjcO;gbkey=Gene;gene=yjcO;gene_biotype=protein_coding;locus_tag=AC56_RS01595;old_locus_tag=AC56_4598
NZ_JJLS01000296.1	Protein Homology	CDS	26527	27216	.	-	0	ID=cds-WP_000719886.1;Parent=gene-AC56_RS01595;Dbxref=GenBank:WP_000719886.1;Name=WP_000719886.1;gbkey=CDS;gene=yjcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313087.1;locus_tag=AC56_RS01595;product=Sel1 family TPR-like repeat protein YjcO;protein_id=WP_000719886.1;transl_table=11
NZ_JJLS01000296.1	RefSeq	gene	27310	29457	.	-	.	ID=gene-AC56_RS01590;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=AC56_RS01590;old_locus_tag=AC56_4599
NZ_JJLS01000296.1	Protein Homology	CDS	27310	29457	.	-	0	ID=cds-WP_001300547.1;Parent=gene-AC56_RS01590;Dbxref=GenBank:WP_001300547.1;Name=WP_001300547.1;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418503.1;locus_tag=AC56_RS01590;product=formate dehydrogenase subunit alpha;protein_id=WP_001300547.1;transl_except=(pos:complement(29038..29040)%2Caa:Sec);transl_table=11
NZ_JJLS01000296.1	RefSeq	gene	29655	31121	.	-	.	ID=gene-AC56_RS01580;Name=mdtP;gbkey=Gene;gene=mdtP;gene_biotype=protein_coding;locus_tag=AC56_RS01580;old_locus_tag=AC56_4602
NZ_JJLS01000296.1	Protein Homology	CDS	29655	31121	.	-	0	ID=cds-WP_000610564.1;Parent=gene-AC56_RS01580;Dbxref=GenBank:WP_000610564.1;Name=WP_000610564.1;gbkey=CDS;gene=mdtP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709855.1;locus_tag=AC56_RS01580;product=multidrug efflux transporter outer membrane subunit MdtP;protein_id=WP_000610564.1;transl_table=11
NZ_JJLS01000296.1	RefSeq	gene	31118	33169	.	-	.	ID=gene-AC56_RS01575;Name=mdtO;gbkey=Gene;gene=mdtO;gene_biotype=protein_coding;locus_tag=AC56_RS01575;old_locus_tag=AC56_4603
NZ_JJLS01000296.1	Protein Homology	CDS	31118	33169	.	-	0	ID=cds-WP_032279295.1;Parent=gene-AC56_RS01575;Dbxref=GenBank:WP_032279295.1;Name=WP_032279295.1;gbkey=CDS;gene=mdtO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418505.2;locus_tag=AC56_RS01575;product=multidrug efflux transporter permease subunit MdtO;protein_id=WP_032279295.1;transl_table=11
NZ_JJLS01000296.1	RefSeq	gene	33169	34200	.	-	.	ID=gene-AC56_RS01570;Name=mdtN;gbkey=Gene;gene=mdtN;gene_biotype=protein_coding;locus_tag=AC56_RS01570;old_locus_tag=AC56_4604
NZ_JJLS01000296.1	Protein Homology	CDS	33169	34200	.	-	0	ID=cds-WP_000446378.1;Parent=gene-AC56_RS01570;Dbxref=GenBank:WP_000446378.1;Name=WP_000446378.1;gbkey=CDS;gene=mdtN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418506.1;locus_tag=AC56_RS01570;product=multidrug efflux transporter periplasmic adaptor subunit MdtN;protein_id=WP_000446378.1;transl_table=11
NZ_JJLS01000296.1	RefSeq	gene	34149	34388	.	-	.	ID=gene-AC56_RS33805;Name=AC56_RS33805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33805
NZ_JJLS01000296.1	Protein Homology	CDS	34149	34388	.	-	0	ID=cds-WP_349237789.1;Parent=gene-AC56_RS33805;Dbxref=GenBank:WP_349237789.1;Name=WP_349237789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001340384.1;locus_tag=AC56_RS33805;product=hypothetical protein;protein_id=WP_349237789.1;transl_table=11
NZ_JJLS01000296.1	RefSeq	gene	34370	34732	.	-	.	ID=gene-AC56_RS0127475;Name=AC56_RS0127475;end_range=34732,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0127475;old_locus_tag=AC56_4605;partial=true
NZ_JJLS01000296.1	Protein Homology	CDS	34370	34732	.	-	0	ID=cds-WP_032282764.1-2;Parent=gene-AC56_RS0127475;Dbxref=GenBank:WP_032282764.1;Name=WP_032282764.1;end_range=34732,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS0127475;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032282764.1;transl_table=11
##sequence-region NZ_JJLS01000297.1 1 14042
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000297.1	RefSeq	region	1	14042	.	+	.	ID=NZ_JJLS01000297.1:1..14042;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000297.1	RefSeq	gene	23	781	.	-	.	ID=gene-AC56_RS01565;Name=phnP;gbkey=Gene;gene=phnP;gene_biotype=protein_coding;locus_tag=AC56_RS01565;old_locus_tag=AC56_4606
NZ_JJLS01000297.1	Protein Homology	CDS	23	781	.	-	0	ID=cds-WP_000059908.1-3;Parent=gene-AC56_RS01565;Dbxref=GenBank:WP_000059908.1;Name=WP_000059908.1;Ontology_term=GO:0019700,GO:0008081;gbkey=CDS;gene=phnP;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418516.1;locus_tag=AC56_RS01565;product=phosphonate metabolism protein PhnP;protein_id=WP_000059908.1;transl_table=11
NZ_JJLS01000297.1	RefSeq	gene	783	1217	.	-	.	ID=gene-AC56_RS01560;Name=phnO;gbkey=Gene;gene=phnO;gene_biotype=protein_coding;locus_tag=AC56_RS01560;old_locus_tag=AC56_4607
NZ_JJLS01000297.1	Protein Homology	CDS	783	1217	.	-	0	ID=cds-WP_001110490.1-3;Parent=gene-AC56_RS01560;Dbxref=GenBank:WP_001110490.1;Name=WP_001110490.1;gbkey=CDS;gene=phnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418517.1;locus_tag=AC56_RS01560;product=aminoalkylphosphonate N-acetyltransferase;protein_id=WP_001110490.1;transl_table=11
NZ_JJLS01000297.1	RefSeq	gene	1204	1761	.	-	.	ID=gene-AC56_RS01555;Name=phnN;gbkey=Gene;gene=phnN;gene_biotype=protein_coding;locus_tag=AC56_RS01555;old_locus_tag=AC56_4608
NZ_JJLS01000297.1	Protein Homology	CDS	1204	1761	.	-	0	ID=cds-WP_000971883.1-3;Parent=gene-AC56_RS01555;Dbxref=GenBank:WP_000971883.1;Name=WP_000971883.1;Ontology_term=GO:0006015,GO:0033863;gbkey=CDS;gene=phnN;go_function=ribose 1%2C5-bisphosphate phosphokinase activity|0033863||IEA;go_process=5-phosphoribose 1-diphosphate biosynthetic process|0006015||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313104.1;locus_tag=AC56_RS01555;product=ribose 1%2C5-bisphosphokinase;protein_id=WP_000971883.1;transl_table=11
NZ_JJLS01000297.1	RefSeq	gene	1761	2897	.	-	.	ID=gene-AC56_RS01550;Name=phnM;gbkey=Gene;gene=phnM;gene_biotype=protein_coding;locus_tag=AC56_RS01550;old_locus_tag=AC56_4609
NZ_JJLS01000297.1	Protein Homology	CDS	1761	2897	.	-	0	ID=cds-WP_016241774.1;Parent=gene-AC56_RS01550;Dbxref=GenBank:WP_016241774.1;Name=WP_016241774.1;Ontology_term=GO:0019700,GO:0016810;gbkey=CDS;gene=phnM;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418519.1;locus_tag=AC56_RS01550;product=alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase;protein_id=WP_016241774.1;transl_table=11
NZ_JJLS01000297.1	RefSeq	gene	2894	3574	.	-	.	ID=gene-AC56_RS01545;Name=phnL;gbkey=Gene;gene=phnL;gene_biotype=protein_coding;locus_tag=AC56_RS01545;old_locus_tag=AC56_4610
NZ_JJLS01000297.1	Protein Homology	CDS	2894	3574	.	-	0	ID=cds-WP_000611405.1;Parent=gene-AC56_RS01545;Dbxref=GenBank:WP_000611405.1;Name=WP_000611405.1;Ontology_term=GO:0019634,GO:0018835;gbkey=CDS;gene=phnL;go_function=carbon phosphorus lyase activity|0018835||IEA;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418520.1;locus_tag=AC56_RS01545;product=phosphonate C-P lyase system protein PhnL;protein_id=WP_000611405.1;transl_table=11
NZ_JJLS01000297.1	RefSeq	gene	3685	4443	.	-	.	ID=gene-AC56_RS01540;Name=phnK;gbkey=Gene;gene=phnK;gene_biotype=protein_coding;locus_tag=AC56_RS01540;old_locus_tag=AC56_4611
NZ_JJLS01000297.1	Protein Homology	CDS	3685	4443	.	-	0	ID=cds-WP_032279299.1;Parent=gene-AC56_RS01540;Dbxref=GenBank:WP_032279299.1;Name=WP_032279299.1;Ontology_term=GO:0019634,GO:0018835;gbkey=CDS;gene=phnK;go_function=carbon phosphorus lyase activity|0018835||IEA;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026282.1;locus_tag=AC56_RS01540;product=phosphonate C-P lyase system protein PhnK;protein_id=WP_032279299.1;transl_table=11
NZ_JJLS01000297.1	RefSeq	gene	4440	5285	.	-	.	ID=gene-AC56_RS01535;Name=phnJ;gbkey=Gene;gene=phnJ;gene_biotype=protein_coding;locus_tag=AC56_RS01535;old_locus_tag=AC56_4612
NZ_JJLS01000297.1	Protein Homology	CDS	4440	5285	.	-	0	ID=cds-WP_016241775.1;Parent=gene-AC56_RS01535;Dbxref=GenBank:WP_016241775.1;Name=WP_016241775.1;gbkey=CDS;gene=phnJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313108.1;locus_tag=AC56_RS01535;product=alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ;protein_id=WP_016241775.1;transl_table=11
NZ_JJLS01000297.1	RefSeq	gene	5278	6342	.	-	.	ID=gene-AC56_RS01530;Name=phnI;gbkey=Gene;gene=phnI;gene_biotype=protein_coding;locus_tag=AC56_RS01530;old_locus_tag=AC56_4613
NZ_JJLS01000297.1	Protein Homology	CDS	5278	6342	.	-	0	ID=cds-WP_001300601.1;Parent=gene-AC56_RS01530;Dbxref=GenBank:WP_001300601.1;Name=WP_001300601.1;gbkey=CDS;gene=phnI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418523.1;locus_tag=AC56_RS01530;product=alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI;protein_id=WP_001300601.1;transl_table=11
NZ_JJLS01000297.1	RefSeq	gene	6342	6926	.	-	.	ID=gene-AC56_RS01525;Name=phnH;gbkey=Gene;gene=phnH;gene_biotype=protein_coding;locus_tag=AC56_RS01525;old_locus_tag=AC56_4614
NZ_JJLS01000297.1	Protein Homology	CDS	6342	6926	.	-	0	ID=cds-WP_000171628.1;Parent=gene-AC56_RS01525;Dbxref=GenBank:WP_000171628.1;Name=WP_000171628.1;Ontology_term=GO:0019634;gbkey=CDS;gene=phnH;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418524.1;locus_tag=AC56_RS01525;product=phosphonate C-P lyase system protein PhnH;protein_id=WP_000171628.1;transl_table=11
NZ_JJLS01000297.1	RefSeq	gene	6923	7375	.	-	.	ID=gene-AC56_RS01520;Name=phnG;gbkey=Gene;gene=phnG;gene_biotype=protein_coding;locus_tag=AC56_RS01520;old_locus_tag=AC56_4615
NZ_JJLS01000297.1	Protein Homology	CDS	6923	7375	.	-	0	ID=cds-WP_000542785.1;Parent=gene-AC56_RS01520;Dbxref=GenBank:WP_000542785.1;Name=WP_000542785.1;Ontology_term=GO:0015716,GO:0019634;gbkey=CDS;gene=phnG;go_process=organic phosphonate transport|0015716||IEA,organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418525.1;locus_tag=AC56_RS01520;product=phosphonate C-P lyase system protein PhnG;protein_id=WP_000542785.1;transl_table=11
NZ_JJLS01000297.1	RefSeq	gene	7376	8053	.	-	.	ID=gene-AC56_RS01515;Name=phnF;gbkey=Gene;gene=phnF;gene_biotype=protein_coding;locus_tag=AC56_RS01515;old_locus_tag=AC56_4616
NZ_JJLS01000297.1	Protein Homology	CDS	7376	8053	.	-	0	ID=cds-WP_248784855.1;Parent=gene-AC56_RS01515;Dbxref=GenBank:WP_248784855.1;Name=WP_248784855.1;gbkey=CDS;gene=phnF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001381590.1;locus_tag=AC56_RS01515;product=phosphonate metabolism transcriptional regulator PhnF;protein_id=WP_248784855.1;transl_table=11
NZ_JJLS01000297.1	RefSeq	gene	8122	8901	.	-	.	ID=gene-AC56_RS01510;Name=phnE;gbkey=Gene;gene=phnE;gene_biotype=protein_coding;locus_tag=AC56_RS01510;old_locus_tag=AC56_4617
NZ_JJLS01000297.1	Protein Homology	CDS	8122	8901	.	-	0	ID=cds-WP_001193500.1;Parent=gene-AC56_RS01510;Dbxref=GenBank:WP_001193500.1;Name=WP_001193500.1;Ontology_term=GO:0015716,GO:0015416,GO:0005886,GO:0055052;gbkey=CDS;gene=phnE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type phosphonate transporter activity|0015416||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313113.2;locus_tag=AC56_RS01510;product=phosphonate ABC transporter%2C permease protein PhnE;protein_id=WP_001193500.1;transl_table=11
NZ_JJLS01000297.1	RefSeq	gene	9007	10023	.	-	.	ID=gene-AC56_RS01505;Name=phnD;gbkey=Gene;gene=phnD;gene_biotype=protein_coding;locus_tag=AC56_RS01505;old_locus_tag=AC56_4618
NZ_JJLS01000297.1	Protein Homology	CDS	9007	10023	.	-	0	ID=cds-WP_000992000.1;Parent=gene-AC56_RS01505;Dbxref=GenBank:WP_000992000.1;Name=WP_000992000.1;Ontology_term=GO:0015716,GO:0043190;gbkey=CDS;gene=phnD;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418529.1;locus_tag=AC56_RS01505;product=phosphonate ABC transporter substrate-binding protein;protein_id=WP_000992000.1;transl_table=11
NZ_JJLS01000297.1	RefSeq	gene	10048	10836	.	-	.	ID=gene-AC56_RS01500;Name=phnC;gbkey=Gene;gene=phnC;gene_biotype=protein_coding;locus_tag=AC56_RS01500;old_locus_tag=AC56_4619
NZ_JJLS01000297.1	Protein Homology	CDS	10048	10836	.	-	0	ID=cds-WP_001193397.1;Parent=gene-AC56_RS01500;Dbxref=GenBank:WP_001193397.1;Name=WP_001193397.1;gbkey=CDS;gene=phnC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709835.2;locus_tag=AC56_RS01500;product=phosphonate ABC transporter ATP-binding protein;protein_id=WP_001193397.1;transl_table=11
NZ_JJLS01000297.1	RefSeq	gene	10969	11412	.	-	.	ID=gene-AC56_RS01495;Name=yjdN;gbkey=Gene;gene=yjdN;gene_biotype=protein_coding;locus_tag=AC56_RS01495;old_locus_tag=AC56_4620
NZ_JJLS01000297.1	Protein Homology	CDS	10969	11412	.	-	0	ID=cds-WP_001131318.1;Parent=gene-AC56_RS01495;Dbxref=GenBank:WP_001131318.1;Name=WP_001131318.1;gbkey=CDS;gene=yjdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313116.1;locus_tag=AC56_RS01495;product=VOC family metalloprotein YjdN;protein_id=WP_001131318.1;transl_table=11
NZ_JJLS01000297.1	RefSeq	gene	12072	12407	.	-	.	ID=gene-AC56_RS01490;Name=yjdM;gbkey=Gene;gene=yjdM;gene_biotype=protein_coding;locus_tag=AC56_RS01490;old_locus_tag=AC56_4621
NZ_JJLS01000297.1	Protein Homology	CDS	12072	12407	.	-	0	ID=cds-WP_001300891.1;Parent=gene-AC56_RS01490;Dbxref=GenBank:WP_001300891.1;Name=WP_001300891.1;gbkey=CDS;gene=yjdM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313117.1;locus_tag=AC56_RS01490;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_001300891.1;transl_table=11
NZ_JJLS01000297.1	RefSeq	pseudogene	12809	13522	.	+	.	ID=gene-AC56_RS01485;Name=AC56_RS01485;end_range=13522,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS01485;old_locus_tag=AC56_4622;partial=true;pseudo=true
NZ_JJLS01000297.1	Protein Homology	CDS	12809	13522	.	+	0	ID=cds-AC56_RS01485;Parent=gene-AC56_RS01485;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=13522,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418533.1;locus_tag=AC56_RS01485;partial=true;product=dynamin family protein;pseudo=true;transl_table=11
NZ_JJLS01000297.1	RefSeq	pseudogene	13576	14042	.	+	.	ID=gene-AC56_RS01480;Name=AC56_RS01480;end_range=14042,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS01480;old_locus_tag=AC56_4623;partial=true;pseudo=true
NZ_JJLS01000297.1	Protein Homology	CDS	13576	14042	.	+	0	ID=cds-AC56_RS01480;Parent=gene-AC56_RS01480;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=14042,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS01480;partial=true;product=IS4-like element IS186A family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000298.1 1 26915
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000298.1	RefSeq	region	1	26915	.	+	.	ID=NZ_JJLS01000298.1:1..26915;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000298.1	RefSeq	gene	1	961	.	+	.	ID=gene-AC56_RS01475;Name=AC56_RS01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS01475;old_locus_tag=AC56_4624;partial=true;start_range=.,1
NZ_JJLS01000298.1	Protein Homology	CDS	1	961	.	+	1	ID=cds-WP_032282478.1-16;Parent=gene-AC56_RS01475;Dbxref=GenBank:WP_032282478.1;Name=WP_032282478.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS01475;partial=true;product=IS4-like element IS421 family transposase;protein_id=WP_032282478.1;start_range=.,1;transl_table=11
NZ_JJLS01000298.1	RefSeq	pseudogene	1130	2659	.	+	.	ID=gene-AC56_RS01470;Name=AC56_RS01470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS01470;old_locus_tag=AC56_4625;partial=true;pseudo=true;start_range=.,1130
NZ_JJLS01000298.1	Protein Homology	CDS	1130	2659	.	+	0	ID=cds-AC56_RS01470;Parent=gene-AC56_RS01470;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709832.1;locus_tag=AC56_RS01470;partial=true;product=clamp-binding protein CrfC;pseudo=true;start_range=.,1130;transl_table=11
NZ_JJLS01000298.1	RefSeq	gene	2656	3534	.	+	.	ID=gene-AC56_RS01465;Name=rdcB;gbkey=Gene;gene=rdcB;gene_biotype=protein_coding;locus_tag=AC56_RS01465;old_locus_tag=AC56_4626
NZ_JJLS01000298.1	Protein Homology	CDS	2656	3534	.	+	0	ID=cds-WP_016241778.1;Parent=gene-AC56_RS01465;Dbxref=GenBank:WP_016241778.1;Name=WP_016241778.1;gbkey=CDS;gene=rdcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313119.2;locus_tag=AC56_RS01465;product=YjcZ-like family protein;protein_id=WP_016241778.1;transl_table=11
NZ_JJLS01000298.1	RefSeq	gene	3798	5300	.	+	.	ID=gene-AC56_RS01460;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=AC56_RS01460;old_locus_tag=AC56_4627
NZ_JJLS01000298.1	Protein Homology	CDS	3798	5300	.	+	0	ID=cds-WP_001295385.1;Parent=gene-AC56_RS01460;Dbxref=GenBank:WP_001295385.1;Name=WP_001295385.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=proP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709830.2;locus_tag=AC56_RS01460;product=glycine betaine/L-proline transporter ProP;protein_id=WP_001295385.1;transl_table=11
NZ_JJLS01000298.1	RefSeq	gene	5412	5501	.	+	.	ID=gene-AC56_RS0127480;Name=pmrR;gbkey=Gene;gene=pmrR;gene_biotype=protein_coding;locus_tag=AC56_RS0127480
NZ_JJLS01000298.1	Protein Homology	CDS	5412	5501	.	+	0	ID=cds-WP_000797657.1;Parent=gene-AC56_RS0127480;Dbxref=GenBank:WP_000797657.1;Name=WP_000797657.1;gbkey=CDS;gene=pmrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000797656.1;locus_tag=AC56_RS0127480;product=LpxT activity modulator PmrR;protein_id=WP_000797657.1;transl_table=11
NZ_JJLS01000298.1	RefSeq	gene	5477	6577	.	-	.	ID=gene-AC56_RS01455;Name=pmrB;gbkey=Gene;gene=pmrB;gene_biotype=protein_coding;locus_tag=AC56_RS01455;old_locus_tag=AC56_4628
NZ_JJLS01000298.1	Protein Homology	CDS	5477	6577	.	-	0	ID=cds-WP_162752779.1;Parent=gene-AC56_RS01455;Dbxref=GenBank:WP_162752779.1;Name=WP_162752779.1;gbkey=CDS;gene=pmrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709829.1;locus_tag=AC56_RS01455;product=two-component system sensor histidine kinase PmrB;protein_id=WP_162752779.1;transl_table=11
NZ_JJLS01000298.1	RefSeq	gene	6578	7246	.	-	.	ID=gene-AC56_RS01450;Name=basR;gbkey=Gene;gene=basR;gene_biotype=protein_coding;locus_tag=AC56_RS01450;old_locus_tag=AC56_4629
NZ_JJLS01000298.1	Protein Homology	CDS	6578	7246	.	-	0	ID=cds-WP_000697915.1;Parent=gene-AC56_RS01450;Dbxref=GenBank:WP_000697915.1;Name=WP_000697915.1;gbkey=CDS;gene=basR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313122.1;locus_tag=AC56_RS01450;product=two-component system response regulator BasR;protein_id=WP_000697915.1;transl_table=11
NZ_JJLS01000298.1	RefSeq	gene	7243	8886	.	-	.	ID=gene-AC56_RS01445;Name=eptA;gbkey=Gene;gene=eptA;gene_biotype=protein_coding;locus_tag=AC56_RS01445;old_locus_tag=AC56_4630
NZ_JJLS01000298.1	Protein Homology	CDS	7243	8886	.	-	0	ID=cds-WP_001295384.1;Parent=gene-AC56_RS01445;Dbxref=GenBank:WP_001295384.1;Name=WP_001295384.1;Ontology_term=GO:0016772;gbkey=CDS;gene=eptA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418538.2;locus_tag=AC56_RS01445;product=phosphoethanolamine transferase EptA;protein_id=WP_001295384.1;transl_table=11
NZ_JJLS01000298.1	RefSeq	gene	8990	10327	.	-	.	ID=gene-AC56_RS01440;Name=adiC;gbkey=Gene;gene=adiC;gene_biotype=protein_coding;locus_tag=AC56_RS01440;old_locus_tag=AC56_4631
NZ_JJLS01000298.1	Protein Homology	CDS	8990	10327	.	-	0	ID=cds-WP_000093154.1;Parent=gene-AC56_RS01440;Dbxref=GenBank:WP_000093154.1;Name=WP_000093154.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=adiC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313124.1;locus_tag=AC56_RS01440;product=arginine/agmatine antiporter;protein_id=WP_000093154.1;transl_table=11
NZ_JJLS01000298.1	RefSeq	gene	10464	11225	.	-	.	ID=gene-AC56_RS01435;Name=adiY;gbkey=Gene;gene=adiY;gene_biotype=protein_coding;locus_tag=AC56_RS01435;old_locus_tag=AC56_4632
NZ_JJLS01000298.1	Protein Homology	CDS	10464	11225	.	-	0	ID=cds-WP_001217060.1;Parent=gene-AC56_RS01435;Dbxref=GenBank:WP_001217060.1;Name=WP_001217060.1;gbkey=CDS;gene=adiY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418540.1;locus_tag=AC56_RS01435;product=DNA-binding transcriptional activator AdiY;protein_id=WP_001217060.1;transl_table=11
NZ_JJLS01000298.1	RefSeq	gene	11550	13817	.	-	.	ID=gene-AC56_RS01430;Name=adiA;gbkey=Gene;gene=adiA;gene_biotype=protein_coding;locus_tag=AC56_RS01430;old_locus_tag=AC56_4633
NZ_JJLS01000298.1	Protein Homology	CDS	11550	13817	.	-	0	ID=cds-WP_077746231.1;Parent=gene-AC56_RS01430;Dbxref=GenBank:WP_077746231.1;Name=WP_077746231.1;Ontology_term=GO:0006520,GO:0016831;gbkey=CDS;gene=adiA;go_function=carboxy-lyase activity|0016831||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418541.2;locus_tag=AC56_RS01430;product=arginine decarboxylase;protein_id=WP_077746231.1;transl_table=11
NZ_JJLS01000298.1	RefSeq	gene	14015	14923	.	-	.	ID=gene-AC56_RS01425;Name=melR;gbkey=Gene;gene=melR;gene_biotype=protein_coding;locus_tag=AC56_RS01425;old_locus_tag=AC56_4634
NZ_JJLS01000298.1	Protein Homology	CDS	14015	14923	.	-	0	ID=cds-WP_001090758.1;Parent=gene-AC56_RS01425;Dbxref=GenBank:WP_001090758.1;Name=WP_001090758.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=melR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418542.1;locus_tag=AC56_RS01425;product=transcriptional regulator MelR;protein_id=WP_001090758.1;transl_table=11
NZ_JJLS01000298.1	RefSeq	gene	15206	16561	.	+	.	ID=gene-AC56_RS01420;Name=melA;gbkey=Gene;gene=melA;gene_biotype=protein_coding;locus_tag=AC56_RS01420;old_locus_tag=AC56_4635
NZ_JJLS01000298.1	Protein Homology	CDS	15206	16561	.	+	0	ID=cds-WP_001522378.1;Parent=gene-AC56_RS01420;Dbxref=GenBank:WP_001522378.1;Name=WP_001522378.1;gbkey=CDS;gene=melA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313128.1;locus_tag=AC56_RS01420;product=alpha-galactosidase;protein_id=WP_001522378.1;transl_table=11
NZ_JJLS01000298.1	RefSeq	gene	16664	18085	.	+	.	ID=gene-AC56_RS01415;Name=melB;gbkey=Gene;gene=melB;gene_biotype=protein_coding;locus_tag=AC56_RS01415;old_locus_tag=AC56_4636
NZ_JJLS01000298.1	Protein Homology	CDS	16664	18085	.	+	0	ID=cds-WP_000028114.1;Parent=gene-AC56_RS01415;Dbxref=GenBank:WP_000028114.1;Name=WP_000028114.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;gene=melB;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418544.2;locus_tag=AC56_RS01415;product=melibiose:sodium transporter MelB;protein_id=WP_000028114.1;transl_table=11
NZ_JJLS01000298.1	RefSeq	gene	18224	18853	.	-	.	ID=gene-AC56_RS01410;Name=yjdF;gbkey=Gene;gene=yjdF;gene_biotype=protein_coding;locus_tag=AC56_RS01410;old_locus_tag=AC56_4637
NZ_JJLS01000298.1	Protein Homology	CDS	18224	18853	.	-	0	ID=cds-WP_000198740.1;Parent=gene-AC56_RS01410;Dbxref=GenBank:WP_000198740.1;Name=WP_000198740.1;gbkey=CDS;gene=yjdF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313130.1;locus_tag=AC56_RS01410;product=DUF2238 domain-containing protein;protein_id=WP_000198740.1;transl_table=11
NZ_JJLS01000298.1	RefSeq	gene	18976	20622	.	-	.	ID=gene-AC56_RS01405;Name=fumB;gbkey=Gene;gene=fumB;gene_biotype=protein_coding;locus_tag=AC56_RS01405;old_locus_tag=AC56_4638
NZ_JJLS01000298.1	Protein Homology	CDS	18976	20622	.	-	0	ID=cds-WP_032267995.1;Parent=gene-AC56_RS01405;Dbxref=GenBank:WP_032267995.1;Name=WP_032267995.1;gbkey=CDS;gene=fumB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418546.1;locus_tag=AC56_RS01405;product=class I fumarate hydratase;protein_id=WP_032267995.1;transl_table=11
NZ_JJLS01000298.1	RefSeq	gene	20700	22040	.	-	.	ID=gene-AC56_RS01400;Name=dcuB;gbkey=Gene;gene=dcuB;gene_biotype=protein_coding;locus_tag=AC56_RS01400;old_locus_tag=AC56_4639
NZ_JJLS01000298.1	Protein Homology	CDS	20700	22040	.	-	0	ID=cds-WP_032279305.1;Parent=gene-AC56_RS01400;Dbxref=GenBank:WP_032279305.1;Name=WP_032279305.1;gbkey=CDS;gene=dcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313132.1;locus_tag=AC56_RS01400;product=anaerobic C4-dicarboxylate transporter DcuB;protein_id=WP_032279305.1;transl_table=11
NZ_JJLS01000298.1	RefSeq	gene	22611	23330	.	-	.	ID=gene-AC56_RS01395;Name=dcuR;gbkey=Gene;gene=dcuR;gene_biotype=protein_coding;locus_tag=AC56_RS01395;old_locus_tag=AC56_4640
NZ_JJLS01000298.1	Protein Homology	CDS	22611	23330	.	-	0	ID=cds-WP_000611288.1;Parent=gene-AC56_RS01395;Dbxref=GenBank:WP_000611288.1;Name=WP_000611288.1;Ontology_term=GO:0000160,GO:0003700;gbkey=CDS;gene=dcuR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313133.1;locus_tag=AC56_RS01395;product=two-component system response regulator DcuR;protein_id=WP_000611288.1;transl_table=11
NZ_JJLS01000298.1	RefSeq	gene	23327	24958	.	-	.	ID=gene-AC56_RS01390;Name=dcuS;gbkey=Gene;gene=dcuS;gene_biotype=protein_coding;locus_tag=AC56_RS01390;old_locus_tag=AC56_4641
NZ_JJLS01000298.1	Protein Homology	CDS	23327	24958	.	-	0	ID=cds-WP_001216486.1;Parent=gene-AC56_RS01390;Dbxref=GenBank:WP_001216486.1;Name=WP_001216486.1;gbkey=CDS;gene=dcuS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313134.1;locus_tag=AC56_RS01390;product=sensor histidine kinase;protein_id=WP_001216486.1;transl_table=11
NZ_JJLS01000298.1	RefSeq	gene	25139	25369	.	+	.	ID=gene-AC56_RS01385;Name=yjdI;gbkey=Gene;gene=yjdI;gene_biotype=protein_coding;locus_tag=AC56_RS01385;old_locus_tag=AC56_4643
NZ_JJLS01000298.1	Protein Homology	CDS	25139	25369	.	+	0	ID=cds-WP_016241784.1;Parent=gene-AC56_RS01385;Dbxref=GenBank:WP_016241784.1;Name=WP_016241784.1;gbkey=CDS;gene=yjdI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313135.1;locus_tag=AC56_RS01385;product=4Fe-4S mono-cluster protein YjdI;protein_id=WP_016241784.1;transl_table=11
NZ_JJLS01000298.1	RefSeq	gene	25381	25653	.	+	.	ID=gene-AC56_RS01380;Name=yjdJ;gbkey=Gene;gene=yjdJ;gene_biotype=protein_coding;locus_tag=AC56_RS01380;old_locus_tag=AC56_4644
NZ_JJLS01000298.1	Protein Homology	CDS	25381	25653	.	+	0	ID=cds-WP_000405647.1;Parent=gene-AC56_RS01380;Dbxref=GenBank:WP_000405647.1;Name=WP_000405647.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;gene=yjdJ;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313136.1;locus_tag=AC56_RS01380;product=GNAT family N-acetyltransferase;protein_id=WP_000405647.1;transl_table=11
NZ_JJLS01000298.1	RefSeq	gene	25880	26176	.	+	.	ID=gene-AC56_RS01375;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;locus_tag=AC56_RS01375;old_locus_tag=AC56_4645
NZ_JJLS01000298.1	Protein Homology	CDS	25880	26176	.	+	0	ID=cds-WP_000398619.1;Parent=gene-AC56_RS01375;Dbxref=GenBank:WP_000398619.1;Name=WP_000398619.1;gbkey=CDS;gene=ghoS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313137.1;locus_tag=AC56_RS01375;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=WP_000398619.1;transl_table=11
NZ_JJLS01000298.1	RefSeq	gene	26204	26377	.	+	.	ID=gene-AC56_RS01370;Name=ghoT;gbkey=Gene;gene=ghoT;gene_biotype=protein_coding;locus_tag=AC56_RS01370;old_locus_tag=AC56_4646
NZ_JJLS01000298.1	Protein Homology	CDS	26204	26377	.	+	0	ID=cds-WP_001173343.1;Parent=gene-AC56_RS01370;Dbxref=GenBank:WP_001173343.1;Name=WP_001173343.1;gbkey=CDS;gene=ghoT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588474.1;locus_tag=AC56_RS01370;product=type V toxin-antitoxin system toxin GhoT;protein_id=WP_001173343.1;transl_table=11
NZ_JJLS01000298.1	RefSeq	pseudogene	26391	26915	.	-	.	ID=gene-AC56_RS01365;Name=AC56_RS01365;end_range=26915,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS01365;old_locus_tag=AC56_4647;partial=true;pseudo=true
NZ_JJLS01000298.1	Protein Homology	CDS	26391	26915	.	-	1	ID=cds-AC56_RS01365;Parent=gene-AC56_RS01365;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0004803;end_range=26915,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS01365;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000299.1 1 36663
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000299.1	RefSeq	region	1	36663	.	+	.	ID=NZ_JJLS01000299.1:1..36663;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000299.1	RefSeq	gene	1	217	.	+	.	ID=gene-AC56_RS01360;Name=AC56_RS01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS01360;old_locus_tag=AC56_4648;partial=true;start_range=.,1
NZ_JJLS01000299.1	Protein Homology	CDS	1	217	.	+	1	ID=cds-WP_000326218.1;Parent=gene-AC56_RS01360;Dbxref=GenBank:WP_000326218.1;Name=WP_000326218.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS01360;partial=true;product=IS1 family transposase;protein_id=WP_000326218.1;start_range=.,1;transl_table=11
NZ_JJLS01000299.1	RefSeq	pseudogene	232	306	.	+	.	ID=gene-AC56_RS33980;Name=AC56_RS33980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33980;partial=true;pseudo=true;start_range=.,232
NZ_JJLS01000299.1	Protein Homology	CDS	232	306	.	+	0	ID=cds-AC56_RS33980;Parent=gene-AC56_RS33980;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001398269.1;locus_tag=AC56_RS33980;partial=true;product=phosphoethanolamine transferase;pseudo=true;start_range=.,232;transl_table=11
NZ_JJLS01000299.1	RefSeq	gene	403	1665	.	-	.	ID=gene-AC56_RS01355;Name=AC56_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS01355;old_locus_tag=AC56_4649
NZ_JJLS01000299.1	Protein Homology	CDS	403	1665	.	-	0	ID=cds-WP_032277756.1;Parent=gene-AC56_RS01355;Dbxref=GenBank:WP_032277756.1;Name=WP_032277756.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708738.1;locus_tag=AC56_RS01355;product=tyrosine-type recombinase/integrase;protein_id=WP_032277756.1;transl_table=11
NZ_JJLS01000299.1	RefSeq	gene	1863	1938	.	-	.	ID=gene-AC56_RS01350;Name=AC56_RS01350;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS01350;old_locus_tag=AC56_4650
NZ_JJLS01000299.1	tRNAscan-SE	tRNA	1863	1938	.	-	.	ID=rna-AC56_RS01350;Parent=gene-AC56_RS01350;anticodon=(pos:complement(1903..1905));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS01350;product=tRNA-Phe
NZ_JJLS01000299.1	tRNAscan-SE	exon	1863	1938	.	-	.	ID=exon-AC56_RS01350-1;Parent=rna-AC56_RS01350;anticodon=(pos:complement(1903..1905));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS01350;product=tRNA-Phe
NZ_JJLS01000299.1	RefSeq	gene	2045	2620	.	-	.	ID=gene-AC56_RS01345;Name=dicD;gbkey=Gene;gene=dicD;gene_biotype=protein_coding;locus_tag=AC56_RS01345;old_locus_tag=AC56_4651
NZ_JJLS01000299.1	Protein Homology	CDS	2045	2620	.	-	0	ID=cds-WP_001188520.1;Parent=gene-AC56_RS01345;Dbxref=GenBank:WP_001188520.1;Name=WP_001188520.1;Ontology_term=GO:0003677;gbkey=CDS;gene=dicD;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710000.1;locus_tag=AC56_RS01345;product=transcriptional regulator;protein_id=WP_001188520.1;transl_table=11
NZ_JJLS01000299.1	RefSeq	gene	2657	4354	.	-	.	ID=gene-AC56_RS01340;Name=dsbD;gbkey=Gene;gene=dsbD;gene_biotype=protein_coding;locus_tag=AC56_RS01340;old_locus_tag=AC56_4652
NZ_JJLS01000299.1	Protein Homology	CDS	2657	4354	.	-	0	ID=cds-WP_000068902.1;Parent=gene-AC56_RS01340;Dbxref=GenBank:WP_000068902.1;Name=WP_000068902.1;gbkey=CDS;gene=dsbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418559.1;locus_tag=AC56_RS01340;product=protein-disulfide reductase DsbD;protein_id=WP_000068902.1;transl_table=11
NZ_JJLS01000299.1	RefSeq	gene	4330	4668	.	-	.	ID=gene-AC56_RS01335;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=AC56_RS01335;old_locus_tag=AC56_4653
NZ_JJLS01000299.1	Protein Homology	CDS	4330	4668	.	-	0	ID=cds-WP_000883400.1;Parent=gene-AC56_RS01335;Dbxref=GenBank:WP_000883400.1;Name=WP_000883400.1;gbkey=CDS;gene=cutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313145.1;locus_tag=AC56_RS01335;product=divalent cation tolerance protein CutA;protein_id=WP_000883400.1;transl_table=11
NZ_JJLS01000299.1	RefSeq	gene	4784	6085	.	-	.	ID=gene-AC56_RS01330;Name=dcuA;gbkey=Gene;gene=dcuA;gene_biotype=protein_coding;locus_tag=AC56_RS01330;old_locus_tag=AC56_4654
NZ_JJLS01000299.1	Protein Homology	CDS	4784	6085	.	-	0	ID=cds-WP_000961959.1;Parent=gene-AC56_RS01330;Dbxref=GenBank:WP_000961959.1;Name=WP_000961959.1;gbkey=CDS;gene=dcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313146.1;locus_tag=AC56_RS01330;product=anaerobic C4-dicarboxylate transporter DcuA;protein_id=WP_000961959.1;transl_table=11
NZ_JJLS01000299.1	RefSeq	gene	6203	7639	.	-	.	ID=gene-AC56_RS01325;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=AC56_RS01325;old_locus_tag=AC56_4655
NZ_JJLS01000299.1	Protein Homology	CDS	6203	7639	.	-	0	ID=cds-WP_000069437.1;Parent=gene-AC56_RS01325;Dbxref=GenBank:WP_000069437.1;Name=WP_000069437.1;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313147.2;locus_tag=AC56_RS01325;product=aspartate ammonia-lyase;protein_id=WP_000069437.1;transl_table=11
NZ_JJLS01000299.1	RefSeq	gene	7976	8452	.	+	.	ID=gene-AC56_RS01320;Name=fxsA;gbkey=Gene;gene=fxsA;gene_biotype=protein_coding;locus_tag=AC56_RS01320;old_locus_tag=AC56_4656
NZ_JJLS01000299.1	Protein Homology	CDS	7976	8452	.	+	0	ID=cds-WP_001267448.1;Parent=gene-AC56_RS01320;Dbxref=GenBank:WP_001267448.1;Name=WP_001267448.1;Ontology_term=GO:0005886;gbkey=CDS;gene=fxsA;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418564.2;locus_tag=AC56_RS01320;product=FxsA family protein;protein_id=WP_001267448.1;transl_table=11
NZ_JJLS01000299.1	RefSeq	gene	8468	9724	.	-	.	ID=gene-AC56_RS01315;Name=yjeH;gbkey=Gene;gene=yjeH;gene_biotype=protein_coding;locus_tag=AC56_RS01315;old_locus_tag=AC56_4657
NZ_JJLS01000299.1	Protein Homology	CDS	8468	9724	.	-	0	ID=cds-WP_000015837.1;Parent=gene-AC56_RS01315;Dbxref=GenBank:WP_000015837.1;Name=WP_000015837.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjeH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418565.1;locus_tag=AC56_RS01315;product=L-methionine/branched-chain amino acid transporter;protein_id=WP_000015837.1;transl_table=11
NZ_JJLS01000299.1	RefSeq	gene	10000	10293	.	+	.	ID=gene-AC56_RS01310;Name=groS;gbkey=Gene;gene=groS;gene_biotype=protein_coding;locus_tag=AC56_RS01310;old_locus_tag=AC56_4658
NZ_JJLS01000299.1	Protein Homology	CDS	10000	10293	.	+	0	ID=cds-WP_001026276.1;Parent=gene-AC56_RS01310;Dbxref=GenBank:WP_001026276.1;Name=WP_001026276.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;gene=groS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027827.1;locus_tag=AC56_RS01310;product=co-chaperone GroES;protein_id=WP_001026276.1;transl_table=11
NZ_JJLS01000299.1	RefSeq	gene	10337	11983	.	+	.	ID=gene-AC56_RS01305;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=AC56_RS01305;old_locus_tag=AC56_4659
NZ_JJLS01000299.1	Protein Homology	CDS	10337	11983	.	+	0	ID=cds-WP_000729117.1;Parent=gene-AC56_RS01305;Dbxref=GenBank:WP_000729117.1;Name=WP_000729117.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1;locus_tag=AC56_RS01305;product=chaperonin GroEL;protein_id=WP_000729117.1;transl_table=11
NZ_JJLS01000299.1	RefSeq	gene	13095	14753	.	+	.	ID=gene-AC56_RS01300;Name=ltrA;gbkey=Gene;gene=ltrA;gene_biotype=protein_coding;locus_tag=AC56_RS01300;old_locus_tag=AC56_4660
NZ_JJLS01000299.1	Protein Homology	CDS	13095	14753	.	+	0	ID=cds-WP_001556378.1;Parent=gene-AC56_RS01300;Dbxref=GenBank:WP_001556378.1;Name=WP_001556378.1;Ontology_term=GO:0000373,GO:0003964;gbkey=CDS;gene=ltrA;go_function=RNA-directed DNA polymerase activity|0003964||IEA;go_process=Group II intron splicing|0000373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001556378.1;locus_tag=AC56_RS01300;product=group II intron reverse transcriptase/maturase;protein_id=WP_001556378.1;transl_table=11
NZ_JJLS01000299.1	RefSeq	gene	14857	15081	.	+	.	ID=gene-AC56_RS01295;Name=AC56_RS01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS01295;old_locus_tag=AC56_4661
NZ_JJLS01000299.1	Protein Homology	CDS	14857	15081	.	+	0	ID=cds-WP_001556379.1;Parent=gene-AC56_RS01295;Dbxref=GenBank:WP_001556379.1;Name=WP_001556379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001556379.1;locus_tag=AC56_RS01295;product=DUF2188 domain-containing protein;protein_id=WP_001556379.1;transl_table=11
NZ_JJLS01000299.1	RefSeq	gene	15349	15702	.	+	.	ID=gene-AC56_RS01290;Name=yjeI;gbkey=Gene;gene=yjeI;gene_biotype=protein_coding;locus_tag=AC56_RS01290;old_locus_tag=AC56_4662
NZ_JJLS01000299.1	Protein Homology	CDS	15349	15702	.	+	0	ID=cds-WP_000558209.1;Parent=gene-AC56_RS01290;Dbxref=GenBank:WP_000558209.1;Name=WP_000558209.1;gbkey=CDS;gene=yjeI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418568.2;locus_tag=AC56_RS01290;product=DUF4156 domain-containing protein;protein_id=WP_000558209.1;transl_table=11
NZ_JJLS01000299.1	RefSeq	gene	15895	16764	.	-	.	ID=gene-AC56_RS01285;Name=yjeJ;gbkey=Gene;gene=yjeJ;gene_biotype=protein_coding;locus_tag=AC56_RS01285;old_locus_tag=AC56_4664
NZ_JJLS01000299.1	Protein Homology	CDS	15895	16764	.	-	0	ID=cds-WP_001008049.1;Parent=gene-AC56_RS01285;Dbxref=GenBank:WP_001008049.1;Name=WP_001008049.1;gbkey=CDS;gene=yjeJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710010.2;locus_tag=AC56_RS01285;product=YjeJ family protein;protein_id=WP_001008049.1;transl_table=11
NZ_JJLS01000299.1	RefSeq	gene	17159	18187	.	-	.	ID=gene-AC56_RS01280;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=AC56_RS01280;old_locus_tag=AC56_4665
NZ_JJLS01000299.1	Protein Homology	CDS	17159	18187	.	-	0	ID=cds-WP_000940526.1;Parent=gene-AC56_RS01280;Dbxref=GenBank:WP_000940526.1;Name=WP_000940526.1;gbkey=CDS;gene=epmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313154.1;locus_tag=AC56_RS01280;product=EF-P beta-lysylation protein EpmB;protein_id=WP_000940526.1;transl_table=11
NZ_JJLS01000299.1	RefSeq	gene	18229	18795	.	+	.	ID=gene-AC56_RS01275;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=AC56_RS01275;old_locus_tag=AC56_4666
NZ_JJLS01000299.1	Protein Homology	CDS	18229	18795	.	+	0	ID=cds-WP_000257278.1;Parent=gene-AC56_RS01275;Dbxref=GenBank:WP_000257278.1;Name=WP_000257278.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=AC56_RS01275;product=elongation factor P;protein_id=WP_000257278.1;transl_table=11
NZ_JJLS01000299.1	RefSeq	gene	18847	18972	.	+	.	ID=gene-AC56_RS01270;Name=ecnA;gbkey=Gene;gene=ecnA;gene_biotype=protein_coding;locus_tag=AC56_RS01270;old_locus_tag=AC56_4667
NZ_JJLS01000299.1	Protein Homology	CDS	18847	18972	.	+	0	ID=cds-WP_000977757.1;Parent=gene-AC56_RS01270;Dbxref=GenBank:WP_000977757.1;Name=WP_000977757.1;gbkey=CDS;gene=ecnA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026283.1;locus_tag=AC56_RS01270;product=lipoprotein antitoxin entericidin A;protein_id=WP_000977757.1;transl_table=11
NZ_JJLS01000299.1	RefSeq	gene	19083	19229	.	+	.	ID=gene-AC56_RS01265;Name=ecnB;gbkey=Gene;gene=ecnB;gene_biotype=protein_coding;locus_tag=AC56_RS01265;old_locus_tag=AC56_4668
NZ_JJLS01000299.1	Protein Homology	CDS	19083	19229	.	+	0	ID=cds-WP_000239596.1;Parent=gene-AC56_RS01265;Dbxref=GenBank:WP_000239596.1;Name=WP_000239596.1;gbkey=CDS;gene=ecnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710016.1;locus_tag=AC56_RS01265;product=lipoprotein toxin entericidin B;protein_id=WP_000239596.1;transl_table=11
NZ_JJLS01000299.1	RefSeq	gene	19411	19728	.	+	.	ID=gene-AC56_RS01260;Name=sugE;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;locus_tag=AC56_RS01260;old_locus_tag=AC56_4669
NZ_JJLS01000299.1	Protein Homology	CDS	19411	19728	.	+	0	ID=cds-WP_000118482.1;Parent=gene-AC56_RS01260;Dbxref=GenBank:WP_000118482.1;Name=WP_000118482.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=sugE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418572.4;locus_tag=AC56_RS01260;product=quaternary ammonium compound efflux SMR transporter SugE;protein_id=WP_000118482.1;transl_table=11
NZ_JJLS01000299.1	RefSeq	gene	19725	20258	.	-	.	ID=gene-AC56_RS01255;Name=blc;gbkey=Gene;gene=blc;gene_biotype=protein_coding;locus_tag=AC56_RS01255;old_locus_tag=AC56_4670
NZ_JJLS01000299.1	Protein Homology	CDS	19725	20258	.	-	0	ID=cds-WP_001238369.1;Parent=gene-AC56_RS01255;Dbxref=GenBank:WP_001238369.1;Name=WP_001238369.1;gbkey=CDS;gene=blc;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313157.1;locus_tag=AC56_RS01255;product=lipocalin Blc;protein_id=WP_001238369.1;transl_table=11
NZ_JJLS01000299.1	RefSeq	gene	20347	21480	.	-	.	ID=gene-AC56_RS01250;Name=ampC;gbkey=Gene;gene=ampC;gene_biotype=protein_coding;locus_tag=AC56_RS01250;old_locus_tag=AC56_4671
NZ_JJLS01000299.1	Protein Homology	CDS	20347	21480	.	-	0	ID=cds-WP_001556381.1;Parent=gene-AC56_RS01250;Dbxref=GenBank:WP_001556381.1;Name=WP_001556381.1;Ontology_term=GO:0008800;gbkey=CDS;gene=ampC;go_function=beta-lactamase activity|0008800||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001336292.1;locus_tag=AC56_RS01250;product=BlaEC family class C beta-lactamase;protein_id=WP_001556381.1;transl_table=11
NZ_JJLS01000299.1	RefSeq	gene	21543	21902	.	-	.	ID=gene-AC56_RS01245;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=AC56_RS01245;old_locus_tag=AC56_4672
NZ_JJLS01000299.1	Protein Homology	CDS	21543	21902	.	-	0	ID=cds-WP_000609663.1;Parent=gene-AC56_RS01245;Dbxref=GenBank:WP_000609663.1;Name=WP_000609663.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313159.1;locus_tag=AC56_RS01245;product=fumarate reductase subunit FrdD;protein_id=WP_000609663.1;transl_table=11
NZ_JJLS01000299.1	RefSeq	gene	21913	22308	.	-	.	ID=gene-AC56_RS01240;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=AC56_RS01240;old_locus_tag=AC56_4673
NZ_JJLS01000299.1	Protein Homology	CDS	21913	22308	.	-	0	ID=cds-WP_000208757.1;Parent=gene-AC56_RS01240;Dbxref=GenBank:WP_000208757.1;Name=WP_000208757.1;Ontology_term=GO:0016020;gbkey=CDS;gene=frdC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313160.1;locus_tag=AC56_RS01240;product=fumarate reductase subunit FrdC;protein_id=WP_000208757.1;transl_table=11
NZ_JJLS01000299.1	RefSeq	gene	22319	23053	.	-	.	ID=gene-AC56_RS01235;Name=frdB;gbkey=Gene;gene=frdB;gene_biotype=protein_coding;locus_tag=AC56_RS01235;old_locus_tag=AC56_4674
NZ_JJLS01000299.1	Protein Homology	CDS	22319	23053	.	-	0	ID=cds-WP_000829498.1;Parent=gene-AC56_RS01235;Dbxref=GenBank:WP_000829498.1;Name=WP_000829498.1;gbkey=CDS;gene=frdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882957.1;locus_tag=AC56_RS01235;product=fumarate reductase iron-sulfur protein;protein_id=WP_000829498.1;transl_table=11
NZ_JJLS01000299.1	RefSeq	gene	23046	24854	.	-	.	ID=gene-AC56_RS01230;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=AC56_RS01230;old_locus_tag=AC56_4675
NZ_JJLS01000299.1	Protein Homology	CDS	23046	24854	.	-	0	ID=cds-WP_001192984.1;Parent=gene-AC56_RS01230;Dbxref=GenBank:WP_001192984.1;Name=WP_001192984.1;Ontology_term=GO:0009061,GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;gene=frdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=anaerobic respiration|0009061||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418578.1;locus_tag=AC56_RS01230;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=WP_001192984.1;transl_table=11
NZ_JJLS01000299.1	RefSeq	gene	25179	26156	.	+	.	ID=gene-AC56_RS01225;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=AC56_RS01225;old_locus_tag=AC56_4676
NZ_JJLS01000299.1	Protein Homology	CDS	25179	26156	.	+	0	ID=cds-WP_000004771.1;Parent=gene-AC56_RS01225;Dbxref=GenBank:WP_000004771.1;Name=WP_000004771.1;Ontology_term=GO:0006418,GO:0004812;gbkey=CDS;gene=epmA;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004771.1;locus_tag=AC56_RS01225;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_000004771.1;transl_table=11
NZ_JJLS01000299.1	RefSeq	gene	26375	27877	.	+	.	ID=gene-AC56_RS01220;Name=yjeM;gbkey=Gene;gene=yjeM;gene_biotype=protein_coding;locus_tag=AC56_RS01220;old_locus_tag=AC56_4677
NZ_JJLS01000299.1	Protein Homology	CDS	26375	27877	.	+	0	ID=cds-WP_001336293.1;Parent=gene-AC56_RS01220;Dbxref=GenBank:WP_001336293.1;Name=WP_001336293.1;Ontology_term=GO:0022857;gbkey=CDS;gene=yjeM;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418580.2;locus_tag=AC56_RS01220;product=glutamate/gamma-aminobutyrate family transporter YjeM;protein_id=WP_001336293.1;transl_table=11
NZ_JJLS01000299.1	RefSeq	gene	27929	28243	.	+	.	ID=gene-AC56_RS01215;Name=yjeN;gbkey=Gene;gene=yjeN;gene_biotype=protein_coding;locus_tag=AC56_RS01215;old_locus_tag=AC56_4678
NZ_JJLS01000299.1	Protein Homology	CDS	27929	28243	.	+	0	ID=cds-WP_000342867.1;Parent=gene-AC56_RS01215;Dbxref=GenBank:WP_000342867.1;Name=WP_000342867.1;gbkey=CDS;gene=yjeN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418581.1;locus_tag=AC56_RS01215;product=protein YjeN;protein_id=WP_000342867.1;transl_table=11
NZ_JJLS01000299.1	RefSeq	gene	28240	28554	.	+	.	ID=gene-AC56_RS01210;Name=yjeO;gbkey=Gene;gene=yjeO;gene_biotype=protein_coding;locus_tag=AC56_RS01210;old_locus_tag=AC56_4679
NZ_JJLS01000299.1	Protein Homology	CDS	28240	28554	.	+	0	ID=cds-WP_001276180.1;Parent=gene-AC56_RS01210;Dbxref=GenBank:WP_001276180.1;Name=WP_001276180.1;gbkey=CDS;gene=yjeO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418582.1;locus_tag=AC56_RS01210;product=YjeO family protein;protein_id=WP_001276180.1;transl_table=11
NZ_JJLS01000299.1	RefSeq	gene	28583	31906	.	-	.	ID=gene-AC56_RS01205;Name=mscM;gbkey=Gene;gene=mscM;gene_biotype=protein_coding;locus_tag=AC56_RS01205;old_locus_tag=AC56_4680
NZ_JJLS01000299.1	Protein Homology	CDS	28583	31906	.	-	0	ID=cds-WP_001236847.1;Parent=gene-AC56_RS01205;Dbxref=GenBank:WP_001236847.1;Name=WP_001236847.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscM;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418583.1;locus_tag=AC56_RS01205;product=miniconductance mechanosensitive channel MscM;protein_id=WP_001236847.1;transl_table=11
NZ_JJLS01000299.1	RefSeq	gene	31928	32896	.	-	.	ID=gene-AC56_RS01200;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=AC56_RS01200;old_locus_tag=AC56_4681
NZ_JJLS01000299.1	Protein Homology	CDS	31928	32896	.	-	0	ID=cds-WP_000934920.1;Parent=gene-AC56_RS01200;Dbxref=GenBank:WP_000934920.1;Name=WP_000934920.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313166.1;locus_tag=AC56_RS01200;product=archaetidylserine decarboxylase;protein_id=WP_000934920.1;transl_table=11
NZ_JJLS01000299.1	RefSeq	gene	32993	34045	.	-	.	ID=gene-AC56_RS01195;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=AC56_RS01195;old_locus_tag=AC56_4682
NZ_JJLS01000299.1	Protein Homology	CDS	32993	34045	.	-	0	ID=cds-WP_000041970.1;Parent=gene-AC56_RS01195;Dbxref=GenBank:WP_000041970.1;Name=WP_000041970.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313167.2;locus_tag=AC56_RS01195;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WP_000041970.1;transl_table=11
NZ_JJLS01000299.1	RefSeq	gene	34140	34685	.	+	.	ID=gene-AC56_RS01190;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=AC56_RS01190;old_locus_tag=AC56_4683
NZ_JJLS01000299.1	Protein Homology	CDS	34140	34685	.	+	0	ID=cds-WP_001295188.1;Parent=gene-AC56_RS01190;Dbxref=GenBank:WP_001295188.1;Name=WP_001295188.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882950.1;locus_tag=AC56_RS01190;product=oligoribonuclease;protein_id=WP_001295188.1;transl_table=11
NZ_JJLS01000299.1	RefSeq	gene	34882	34957	.	+	.	ID=gene-AC56_RS01185;Name=AC56_RS01185;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS01185;old_locus_tag=AC56_4684
NZ_JJLS01000299.1	tRNAscan-SE	tRNA	34882	34957	.	+	.	ID=rna-AC56_RS01185;Parent=gene-AC56_RS01185;anticodon=(pos:34915..34917);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS01185;product=tRNA-Gly
NZ_JJLS01000299.1	tRNAscan-SE	exon	34882	34957	.	+	.	ID=exon-AC56_RS01185-1;Parent=rna-AC56_RS01185;anticodon=(pos:34915..34917);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS01185;product=tRNA-Gly
NZ_JJLS01000299.1	RefSeq	gene	34993	35068	.	+	.	ID=gene-AC56_RS01180;Name=AC56_RS01180;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS01180;old_locus_tag=AC56_4685
NZ_JJLS01000299.1	tRNAscan-SE	tRNA	34993	35068	.	+	.	ID=rna-AC56_RS01180;Parent=gene-AC56_RS01180;anticodon=(pos:35026..35028);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS01180;product=tRNA-Gly
NZ_JJLS01000299.1	tRNAscan-SE	exon	34993	35068	.	+	.	ID=exon-AC56_RS01180-1;Parent=rna-AC56_RS01180;anticodon=(pos:35026..35028);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS01180;product=tRNA-Gly
NZ_JJLS01000299.1	RefSeq	gene	35302	35355	.	+	.	ID=gene-AC56_RS32455;Name=AC56_RS32455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS32455
NZ_JJLS01000299.1	Protein Homology	CDS	35302	35355	.	+	0	ID=cds-WP_010723271.1;Parent=gene-AC56_RS32455;Dbxref=GenBank:WP_010723271.1;Name=WP_010723271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791261.1;locus_tag=AC56_RS32455;product=hypothetical protein;protein_id=WP_010723271.1;transl_table=11
NZ_JJLS01000299.1	RefSeq	gene	35338	36477	.	-	.	ID=gene-AC56_RS01175;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=AC56_RS01175;old_locus_tag=AC56_4686
NZ_JJLS01000299.1	Protein Homology	CDS	35338	36477	.	-	0	ID=cds-WP_001294219.1;Parent=gene-AC56_RS01175;Dbxref=GenBank:WP_001294219.1;Name=WP_001294219.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418587.1;locus_tag=AC56_RS01175;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_001294219.1;transl_table=11
NZ_JJLS01000299.1	RefSeq	pseudogene	36476	36663	.	+	.	ID=gene-AC56_RS01170;Name=AC56_RS01170;end_range=36663,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS01170;old_locus_tag=AC56_4687;partial=true;pseudo=true
NZ_JJLS01000299.1	Protein Homology	CDS	36476	36663	.	+	0	ID=cds-AC56_RS01170;Parent=gene-AC56_RS01170;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=36663,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418588.1;locus_tag=AC56_RS01170;partial=true;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000300.1 1 51316
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000300.1	RefSeq	region	1	51316	.	+	.	ID=NZ_JJLS01000300.1:1..51316;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000300.1	RefSeq	gene	34	109	.	+	.	ID=gene-AC56_RS01165;Name=AC56_RS01165;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS01165;old_locus_tag=AC56_4688
NZ_JJLS01000300.1	tRNAscan-SE	tRNA	34	109	.	+	.	ID=rna-AC56_RS01165;Parent=gene-AC56_RS01165;anticodon=(pos:67..69);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS01165;product=tRNA-Gly
NZ_JJLS01000300.1	tRNAscan-SE	exon	34	109	.	+	.	ID=exon-AC56_RS01165-1;Parent=rna-AC56_RS01165;anticodon=(pos:67..69);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS01165;product=tRNA-Gly
NZ_JJLS01000300.1	RefSeq	gene	343	396	.	+	.	ID=gene-AC56_RS32460;Name=AC56_RS32460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS32460
NZ_JJLS01000300.1	Protein Homology	CDS	343	396	.	+	0	ID=cds-WP_010723271.1-2;Parent=gene-AC56_RS32460;Dbxref=GenBank:WP_010723271.1;Name=WP_010723271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791261.1;locus_tag=AC56_RS32460;product=hypothetical protein;protein_id=WP_010723271.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	379	1518	.	-	.	ID=gene-AC56_RS01160;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=AC56_RS01160;old_locus_tag=AC56_4689
NZ_JJLS01000300.1	Protein Homology	CDS	379	1518	.	-	0	ID=cds-WP_001294219.1-2;Parent=gene-AC56_RS01160;Dbxref=GenBank:WP_001294219.1;Name=WP_001294219.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418587.1;locus_tag=AC56_RS01160;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_001294219.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	1517	3064	.	+	.	ID=gene-AC56_RS01155;Name=nnr;gbkey=Gene;gene=nnr;gene_biotype=protein_coding;locus_tag=AC56_RS01155;old_locus_tag=AC56_4690
NZ_JJLS01000300.1	Protein Homology	CDS	1517	3064	.	+	0	ID=cds-WP_001351889.1;Parent=gene-AC56_RS01155;Dbxref=GenBank:WP_001351889.1;Name=WP_001351889.1;Ontology_term=GO:0052855;gbkey=CDS;gene=nnr;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418588.1;locus_tag=AC56_RS01155;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=WP_001351889.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	3036	3497	.	+	.	ID=gene-AC56_RS01150;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=AC56_RS01150;old_locus_tag=AC56_4691
NZ_JJLS01000300.1	Protein Homology	CDS	3036	3497	.	+	0	ID=cds-WP_000981977.1;Parent=gene-AC56_RS01150;Dbxref=GenBank:WP_000981977.1;Name=WP_000981977.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313171.1;locus_tag=AC56_RS01150;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_000981977.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	3516	4853	.	+	.	ID=gene-AC56_RS01145;Name=amiB;gbkey=Gene;gene=amiB;gene_biotype=protein_coding;locus_tag=AC56_RS01145;old_locus_tag=AC56_4692
NZ_JJLS01000300.1	Protein Homology	CDS	3516	4853	.	+	0	ID=cds-WP_000640382.1;Parent=gene-AC56_RS01145;Dbxref=GenBank:WP_000640382.1;Name=WP_000640382.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiB;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418590.1;locus_tag=AC56_RS01145;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=WP_000640382.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	4863	6710	.	+	.	ID=gene-AC56_RS01140;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=AC56_RS01140;old_locus_tag=AC56_4693
NZ_JJLS01000300.1	Protein Homology	CDS	4863	6710	.	+	0	ID=cds-WP_001122505.1;Parent=gene-AC56_RS01140;Dbxref=GenBank:WP_001122505.1;Name=WP_001122505.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418591.1;locus_tag=AC56_RS01140;product=DNA mismatch repair endonuclease MutL;protein_id=WP_001122505.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	6703	7653	.	+	.	ID=gene-AC56_RS01135;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=AC56_RS01135;old_locus_tag=AC56_4694
NZ_JJLS01000300.1	Protein Homology	CDS	6703	7653	.	+	0	ID=cds-WP_001280345.1;Parent=gene-AC56_RS01135;Dbxref=GenBank:WP_001280345.1;Name=WP_001280345.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418592.1;locus_tag=AC56_RS01135;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_001280345.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	7739	8047	.	+	.	ID=gene-AC56_RS01130;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=AC56_RS01130;old_locus_tag=AC56_4695
NZ_JJLS01000300.1	Protein Homology	CDS	7739	8047	.	+	0	ID=cds-WP_001051883.1;Parent=gene-AC56_RS01130;Dbxref=GenBank:WP_001051883.1;Name=WP_001051883.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313175.1;locus_tag=AC56_RS01130;product=RNA chaperone Hfq;protein_id=WP_001051883.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	8123	9403	.	+	.	ID=gene-AC56_RS01125;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=AC56_RS01125;old_locus_tag=AC56_4696
NZ_JJLS01000300.1	Protein Homology	CDS	8123	9403	.	+	0	ID=cds-WP_000460360.1;Parent=gene-AC56_RS01125;Dbxref=GenBank:WP_000460360.1;Name=WP_000460360.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313176.1;locus_tag=AC56_RS01125;product=ribosome rescue GTPase HflX;protein_id=WP_000460360.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	9489	10748	.	+	.	ID=gene-AC56_RS01120;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=AC56_RS01120;old_locus_tag=AC56_4697
NZ_JJLS01000300.1	Protein Homology	CDS	9489	10748	.	+	0	ID=cds-WP_000312488.1;Parent=gene-AC56_RS01120;Dbxref=GenBank:WP_000312488.1;Name=WP_000312488.1;Ontology_term=GO:0016020;gbkey=CDS;gene=hflK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313177.1;locus_tag=AC56_RS01120;product=FtsH protease activity modulator HflK;protein_id=WP_000312488.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	10751	11755	.	+	.	ID=gene-AC56_RS01115;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=AC56_RS01115;old_locus_tag=AC56_4698
NZ_JJLS01000300.1	Protein Homology	CDS	10751	11755	.	+	0	ID=cds-WP_001232412.1;Parent=gene-AC56_RS01115;Dbxref=GenBank:WP_001232412.1;Name=WP_001232412.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313178.1;locus_tag=AC56_RS01115;product=protease modulator HflC;protein_id=WP_001232412.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	11837	12034	.	+	.	ID=gene-AC56_RS01110;Name=yjeT;gbkey=Gene;gene=yjeT;gene_biotype=protein_coding;locus_tag=AC56_RS01110;old_locus_tag=AC56_4699
NZ_JJLS01000300.1	Protein Homology	CDS	11837	12034	.	+	0	ID=cds-WP_001089295.1;Parent=gene-AC56_RS01110;Dbxref=GenBank:WP_001089295.1;Name=WP_001089295.1;gbkey=CDS;gene=yjeT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313179.1;locus_tag=AC56_RS01110;product=DUF2065 domain-containing protein;protein_id=WP_001089295.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	12138	13436	.	+	.	ID=gene-AC56_RS01105;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=AC56_RS01105;old_locus_tag=AC56_4700
NZ_JJLS01000300.1	Protein Homology	CDS	12138	13436	.	+	0	ID=cds-WP_000527955.1;Parent=gene-AC56_RS01105;Dbxref=GenBank:WP_000527955.1;Name=WP_000527955.1;Ontology_term=GO:0009152,GO:0004019;gbkey=CDS;gene=purA;go_function=adenylosuccinate synthase activity|0004019||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842885.1;locus_tag=AC56_RS01105;product=adenylosuccinate synthase;protein_id=WP_000527955.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	13641	14066	.	+	.	ID=gene-AC56_RS01100;Name=nsrR;gbkey=Gene;gene=nsrR;gene_biotype=protein_coding;locus_tag=AC56_RS01100;old_locus_tag=AC56_4701
NZ_JJLS01000300.1	Protein Homology	CDS	13641	14066	.	+	0	ID=cds-WP_001177639.1;Parent=gene-AC56_RS01100;Dbxref=GenBank:WP_001177639.1;Name=WP_001177639.1;gbkey=CDS;gene=nsrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134424.1;locus_tag=AC56_RS01100;product=nitric oxide-sensing transcriptional repressor NsrR;protein_id=WP_001177639.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	14105	16546	.	+	.	ID=gene-AC56_RS01095;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=AC56_RS01095;old_locus_tag=AC56_4702
NZ_JJLS01000300.1	Protein Homology	CDS	14105	16546	.	+	0	ID=cds-WP_000076332.1;Parent=gene-AC56_RS01095;Dbxref=GenBank:WP_000076332.1;Name=WP_000076332.1;Ontology_term=GO:0016070,GO:0004540;gbkey=CDS;gene=rnr;go_function=RNA nuclease activity|0004540||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418600.4;locus_tag=AC56_RS01095;product=ribonuclease R;protein_id=WP_000076332.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	16726	17457	.	+	.	ID=gene-AC56_RS01090;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=AC56_RS01090;old_locus_tag=AC56_4703
NZ_JJLS01000300.1	Protein Homology	CDS	16726	17457	.	+	0	ID=cds-WP_001293282.1;Parent=gene-AC56_RS01090;Dbxref=GenBank:WP_001293282.1;Name=WP_001293282.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313183.1;locus_tag=AC56_RS01090;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_001293282.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	17584	17985	.	+	.	ID=gene-AC56_RS01085;Name=yjfI;gbkey=Gene;gene=yjfI;gene_biotype=protein_coding;locus_tag=AC56_RS01085;old_locus_tag=AC56_4704
NZ_JJLS01000300.1	Protein Homology	CDS	17584	17985	.	+	0	ID=cds-WP_000220128.1;Parent=gene-AC56_RS01085;Dbxref=GenBank:WP_000220128.1;Name=WP_000220128.1;gbkey=CDS;gene=yjfI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313184.1;locus_tag=AC56_RS01085;product=YjfI family protein;protein_id=WP_000220128.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	18004	18702	.	+	.	ID=gene-AC56_RS01080;Name=yjfJ;gbkey=Gene;gene=yjfJ;gene_biotype=protein_coding;locus_tag=AC56_RS01080;old_locus_tag=AC56_4705
NZ_JJLS01000300.1	Protein Homology	CDS	18004	18702	.	+	0	ID=cds-WP_000511955.1;Parent=gene-AC56_RS01080;Dbxref=GenBank:WP_000511955.1;Name=WP_000511955.1;gbkey=CDS;gene=yjfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418603.1;locus_tag=AC56_RS01080;product=PspA/IM30 family protein;protein_id=WP_000511955.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	18753	19412	.	+	.	ID=gene-AC56_RS01075;Name=yjfK;gbkey=Gene;gene=yjfK;gene_biotype=protein_coding;locus_tag=AC56_RS01075;old_locus_tag=AC56_4706
NZ_JJLS01000300.1	Protein Homology	CDS	18753	19412	.	+	0	ID=cds-WP_000012550.1;Parent=gene-AC56_RS01075;Dbxref=GenBank:WP_000012550.1;Name=WP_000012550.1;gbkey=CDS;gene=yjfK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418604.1;locus_tag=AC56_RS01075;product=YjfK family protein;protein_id=WP_000012550.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	19430	19828	.	+	.	ID=gene-AC56_RS01070;Name=yjfL;gbkey=Gene;gene=yjfL;gene_biotype=protein_coding;locus_tag=AC56_RS01070;old_locus_tag=AC56_4707
NZ_JJLS01000300.1	Protein Homology	CDS	19430	19828	.	+	0	ID=cds-WP_000547760.1;Parent=gene-AC56_RS01070;Dbxref=GenBank:WP_000547760.1;Name=WP_000547760.1;gbkey=CDS;gene=yjfL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313187.1;locus_tag=AC56_RS01070;product=DUF350 domain-containing protein;protein_id=WP_000547760.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	19838	20476	.	+	.	ID=gene-AC56_RS01065;Name=yjfM;gbkey=Gene;gene=yjfM;gene_biotype=protein_coding;locus_tag=AC56_RS01065;old_locus_tag=AC56_4708
NZ_JJLS01000300.1	Protein Homology	CDS	19838	20476	.	+	0	ID=cds-WP_000101685.1;Parent=gene-AC56_RS01065;Dbxref=GenBank:WP_000101685.1;Name=WP_000101685.1;gbkey=CDS;gene=yjfM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418606.1;locus_tag=AC56_RS01065;product=DUF1190 domain-containing protein;protein_id=WP_000101685.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	20479	21642	.	+	.	ID=gene-AC56_RS01060;Name=yjfC;gbkey=Gene;gene=yjfC;gene_biotype=protein_coding;locus_tag=AC56_RS01060;old_locus_tag=AC56_4709
NZ_JJLS01000300.1	Protein Homology	CDS	20479	21642	.	+	0	ID=cds-WP_000943964.1;Parent=gene-AC56_RS01060;Dbxref=GenBank:WP_000943964.1;Name=WP_000943964.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;gene=yjfC;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313189.1;locus_tag=AC56_RS01060;product=glutathionylspermidine synthase family protein;protein_id=WP_000943964.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	21726	23351	.	+	.	ID=gene-AC56_RS01055;Name=aidB;gbkey=Gene;gene=aidB;gene_biotype=protein_coding;locus_tag=AC56_RS01055;old_locus_tag=AC56_4710
NZ_JJLS01000300.1	Protein Homology	CDS	21726	23351	.	+	0	ID=cds-WP_001295190.1;Parent=gene-AC56_RS01055;Dbxref=GenBank:WP_001295190.1;Name=WP_001295190.1;Ontology_term=GO:0003995;gbkey=CDS;gene=aidB;go_function=acyl-CoA dehydrogenase activity|0003995||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418608.6;locus_tag=AC56_RS01055;product=isovaleryl-CoA dehydrogenase;protein_id=WP_001295190.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	23468	23743	.	-	.	ID=gene-AC56_RS01050;Name=yjfN;gbkey=Gene;gene=yjfN;gene_biotype=protein_coding;locus_tag=AC56_RS01050;old_locus_tag=AC56_4711
NZ_JJLS01000300.1	Protein Homology	CDS	23468	23743	.	-	0	ID=cds-WP_000811566.1;Parent=gene-AC56_RS01050;Dbxref=GenBank:WP_000811566.1;Name=WP_000811566.1;gbkey=CDS;gene=yjfN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418609.4;locus_tag=AC56_RS01050;product=DUF1471 family protease activator YjfN;protein_id=WP_000811566.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	23892	24221	.	-	.	ID=gene-AC56_RS01045;Name=bsmA;gbkey=Gene;gene=bsmA;gene_biotype=protein_coding;locus_tag=AC56_RS01045;old_locus_tag=AC56_4712
NZ_JJLS01000300.1	Protein Homology	CDS	23892	24221	.	-	0	ID=cds-WP_000254633.1;Parent=gene-AC56_RS01045;Dbxref=GenBank:WP_000254633.1;Name=WP_000254633.1;gbkey=CDS;gene=bsmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418610.4;locus_tag=AC56_RS01045;product=biofilm peroxide resistance protein BsmA;protein_id=WP_000254633.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	24403	25152	.	+	.	ID=gene-AC56_RS01040;Name=yjfP;gbkey=Gene;gene=yjfP;gene_biotype=protein_coding;locus_tag=AC56_RS01040;old_locus_tag=AC56_4713
NZ_JJLS01000300.1	Protein Homology	CDS	24403	25152	.	+	0	ID=cds-WP_000569679.1;Parent=gene-AC56_RS01040;Dbxref=GenBank:WP_000569679.1;Name=WP_000569679.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=yjfP;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313193.1;locus_tag=AC56_RS01040;product=esterase;protein_id=WP_000569679.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	25149	25904	.	-	.	ID=gene-AC56_RS01035;Name=ulaR;gbkey=Gene;gene=ulaR;gene_biotype=protein_coding;locus_tag=AC56_RS01035;old_locus_tag=AC56_4714
NZ_JJLS01000300.1	Protein Homology	CDS	25149	25904	.	-	0	ID=cds-WP_000133631.1;Parent=gene-AC56_RS01035;Dbxref=GenBank:WP_000133631.1;Name=WP_000133631.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ulaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313194.1;locus_tag=AC56_RS01035;product=HTH-type transcriptional regulator UlaR;protein_id=WP_000133631.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	26012	27076	.	-	.	ID=gene-AC56_RS01030;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=AC56_RS01030;old_locus_tag=AC56_4715
NZ_JJLS01000300.1	Protein Homology	CDS	26012	27076	.	-	0	ID=cds-WP_001301370.1;Parent=gene-AC56_RS01030;Dbxref=GenBank:WP_001301370.1;Name=WP_001301370.1;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856017.1;locus_tag=AC56_RS01030;product=L-ascorbate 6-phosphate lactonase;protein_id=WP_001301370.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	27431	28828	.	+	.	ID=gene-AC56_RS01025;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;locus_tag=AC56_RS01025;old_locus_tag=AC56_4716
NZ_JJLS01000300.1	Protein Homology	CDS	27431	28828	.	+	0	ID=cds-WP_001351893.1;Parent=gene-AC56_RS01025;Dbxref=GenBank:WP_001351893.1;Name=WP_001351893.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418614.4;locus_tag=AC56_RS01025;product=PTS ascorbate transporter subunit IIC;protein_id=WP_001351893.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	28844	29149	.	+	.	ID=gene-AC56_RS01020;Name=ulaB;gbkey=Gene;gene=ulaB;gene_biotype=protein_coding;locus_tag=AC56_RS01020;old_locus_tag=AC56_4717
NZ_JJLS01000300.1	Protein Homology	CDS	28844	29149	.	+	0	ID=cds-WP_000218362.1;Parent=gene-AC56_RS01020;Dbxref=GenBank:WP_000218362.1;Name=WP_000218362.1;gbkey=CDS;gene=ulaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313197.1;locus_tag=AC56_RS01020;product=PTS ascorbate transporter subunit IIB;protein_id=WP_000218362.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	29159	29623	.	+	.	ID=gene-AC56_RS01015;Name=ulaC;gbkey=Gene;gene=ulaC;gene_biotype=protein_coding;locus_tag=AC56_RS01015;old_locus_tag=AC56_4718
NZ_JJLS01000300.1	Protein Homology	CDS	29159	29623	.	+	0	ID=cds-WP_000776505.1;Parent=gene-AC56_RS01015;Dbxref=GenBank:WP_000776505.1;Name=WP_000776505.1;gbkey=CDS;gene=ulaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710060.1;locus_tag=AC56_RS01015;product=PTS ascorbate transporter subunit IIA;protein_id=WP_000776505.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	29637	30287	.	+	.	ID=gene-AC56_RS01010;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=AC56_RS01010;old_locus_tag=AC56_4719
NZ_JJLS01000300.1	Protein Homology	CDS	29637	30287	.	+	0	ID=cds-WP_000056760.1;Parent=gene-AC56_RS01010;Dbxref=GenBank:WP_000056760.1;Name=WP_000056760.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313199.1;locus_tag=AC56_RS01010;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_000056760.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	30297	31151	.	+	.	ID=gene-AC56_RS01005;Name=ulaE;gbkey=Gene;gene=ulaE;gene_biotype=protein_coding;locus_tag=AC56_RS01005;old_locus_tag=AC56_4720
NZ_JJLS01000300.1	Protein Homology	CDS	30297	31151	.	+	0	ID=cds-WP_000949504.1;Parent=gene-AC56_RS01005;Dbxref=GenBank:WP_000949504.1;Name=WP_000949504.1;gbkey=CDS;gene=ulaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313200.1;locus_tag=AC56_RS01005;product=L-ribulose-5-phosphate 3-epimerase UlaE;protein_id=WP_000949504.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	31151	31837	.	+	.	ID=gene-AC56_RS01000;Name=ulaF;gbkey=Gene;gene=ulaF;gene_biotype=protein_coding;locus_tag=AC56_RS01000;old_locus_tag=AC56_4721
NZ_JJLS01000300.1	Protein Homology	CDS	31151	31837	.	+	0	ID=cds-WP_001170848.1;Parent=gene-AC56_RS01000;Dbxref=GenBank:WP_001170848.1;Name=WP_001170848.1;gbkey=CDS;gene=ulaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418619.1;locus_tag=AC56_RS01000;product=L-ribulose-5-phosphate 4-epimerase UlaF;protein_id=WP_001170848.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	31966	32241	.	-	.	ID=gene-AC56_RS00995;Name=yjfY;gbkey=Gene;gene=yjfY;gene_biotype=protein_coding;locus_tag=AC56_RS00995;old_locus_tag=AC56_4722
NZ_JJLS01000300.1	Protein Homology	CDS	31966	32241	.	-	0	ID=cds-WP_000492914.1;Parent=gene-AC56_RS00995;Dbxref=GenBank:WP_000492914.1;Name=WP_000492914.1;gbkey=CDS;gene=yjfY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313202.1;locus_tag=AC56_RS00995;product=DUF1471 family protein YjfY;protein_id=WP_000492914.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	32568	32963	.	+	.	ID=gene-AC56_RS00990;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=AC56_RS00990;old_locus_tag=AC56_4723
NZ_JJLS01000300.1	Protein Homology	CDS	32568	32963	.	+	0	ID=cds-WP_001216676.1;Parent=gene-AC56_RS00990;Dbxref=GenBank:WP_001216676.1;Name=WP_001216676.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1;locus_tag=AC56_RS00990;product=30S ribosomal protein S6;protein_id=WP_001216676.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	32970	33284	.	+	.	ID=gene-AC56_RS0127500;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=AC56_RS0127500
NZ_JJLS01000300.1	Protein Homology	CDS	32970	33284	.	+	0	ID=cds-WP_001296681.1;Parent=gene-AC56_RS0127500;Dbxref=GenBank:WP_001296681.1;Name=WP_001296681.1;Ontology_term=GO:0006260,GO:0003697,GO:0030894;gbkey=CDS;gene=priB;go_component=replisome|0030894||IEA;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313204.1;locus_tag=AC56_RS0127500;product=primosomal replication protein N;protein_id=WP_001296681.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	33289	33516	.	+	.	ID=gene-AC56_RS00985;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=AC56_RS00985;old_locus_tag=AC56_4724
NZ_JJLS01000300.1	Protein Homology	CDS	33289	33516	.	+	0	ID=cds-WP_000135199.1;Parent=gene-AC56_RS00985;Dbxref=GenBank:WP_000135199.1;Name=WP_000135199.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=AC56_RS00985;product=30S ribosomal protein S18;protein_id=WP_000135199.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	33558	34007	.	+	.	ID=gene-AC56_RS00980;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=AC56_RS00980;old_locus_tag=AC56_4725
NZ_JJLS01000300.1	Protein Homology	CDS	33558	34007	.	+	0	ID=cds-WP_001196062.1;Parent=gene-AC56_RS00980;Dbxref=GenBank:WP_001196062.1;Name=WP_001196062.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134442.1;locus_tag=AC56_RS00980;product=50S ribosomal protein L9;protein_id=WP_001196062.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	34109	35386	.	-	.	ID=gene-AC56_RS00975;Name=AC56_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS00975;old_locus_tag=AC56_4726
NZ_JJLS01000300.1	Protein Homology	CDS	34109	35386	.	-	0	ID=cds-WP_001033615.1;Parent=gene-AC56_RS00975;Dbxref=GenBank:WP_001033615.1;Name=WP_001033615.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033602.1;locus_tag=AC56_RS00975;product=MFS transporter;protein_id=WP_001033615.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	35479	37551	.	-	.	ID=gene-AC56_RS00970;Name=AC56_RS00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS00970;old_locus_tag=AC56_4727
NZ_JJLS01000300.1	Protein Homology	CDS	35479	37551	.	-	0	ID=cds-WP_000080350.1;Parent=gene-AC56_RS00970;Dbxref=GenBank:WP_000080350.1;Name=WP_000080350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001591423.1;locus_tag=AC56_RS00970;product=FAD-dependent oxidoreductase;protein_id=WP_000080350.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	37548	39089	.	-	.	ID=gene-AC56_RS00965;Name=AC56_RS00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS00965;old_locus_tag=AC56_4728
NZ_JJLS01000300.1	Protein Homology	CDS	37548	39089	.	-	0	ID=cds-WP_032279315.1;Parent=gene-AC56_RS00965;Dbxref=GenBank:WP_032279315.1;Name=WP_032279315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001226973.1;locus_tag=AC56_RS00965;product=acyl CoA:acetate/3-ketoacid CoA transferase;protein_id=WP_032279315.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	39099	39875	.	-	.	ID=gene-AC56_RS00960;Name=AC56_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS00960;old_locus_tag=AC56_4729
NZ_JJLS01000300.1	Protein Homology	CDS	39099	39875	.	-	0	ID=cds-WP_032279316.1;Parent=gene-AC56_RS00960;Dbxref=GenBank:WP_032279316.1;Name=WP_032279316.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001283531.1;locus_tag=AC56_RS00960;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_032279316.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	39885	40727	.	-	.	ID=gene-AC56_RS00955;Name=AC56_RS00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS00955;old_locus_tag=AC56_4730
NZ_JJLS01000300.1	Protein Homology	CDS	39885	40727	.	-	0	ID=cds-WP_032187782.1;Parent=gene-AC56_RS00955;Dbxref=GenBank:WP_032187782.1;Name=WP_032187782.1;Ontology_term=GO:0003824,GO:0016853;gbkey=CDS;go_function=catalytic activity|0003824||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001205218.1;locus_tag=AC56_RS00955;product=sugar phosphate isomerase/epimerase family protein;protein_id=WP_032187782.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	40737	41528	.	-	.	ID=gene-AC56_RS00950;Name=AC56_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS00950;old_locus_tag=AC56_4731
NZ_JJLS01000300.1	Protein Homology	CDS	40737	41528	.	-	0	ID=cds-WP_000843384.1;Parent=gene-AC56_RS00950;Dbxref=GenBank:WP_000843384.1;Name=WP_000843384.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709993.2;locus_tag=AC56_RS00950;product=3-ketoacyl-ACP reductase;protein_id=WP_000843384.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	41741	42388	.	+	.	ID=gene-AC56_RS00945;Name=AC56_RS00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS00945;old_locus_tag=AC56_4732
NZ_JJLS01000300.1	Protein Homology	CDS	41741	42388	.	+	0	ID=cds-WP_032279319.1;Parent=gene-AC56_RS00945;Dbxref=GenBank:WP_032279319.1;Name=WP_032279319.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709992.3;locus_tag=AC56_RS00945;product=TetR/AcrR family transcriptional regulator;protein_id=WP_032279319.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	42372	43010	.	-	.	ID=gene-AC56_RS00940;Name=ytfB;gbkey=Gene;gene=ytfB;gene_biotype=protein_coding;locus_tag=AC56_RS00940;old_locus_tag=AC56_4733
NZ_JJLS01000300.1	Protein Homology	CDS	42372	43010	.	-	0	ID=cds-WP_001556389.1;Parent=gene-AC56_RS00940;Dbxref=GenBank:WP_001556389.1;Name=WP_001556389.1;gbkey=CDS;gene=ytfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418627.4;locus_tag=AC56_RS00940;product=cell division protein YtfB;protein_id=WP_001556389.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	43229	43849	.	+	.	ID=gene-AC56_RS00935;Name=fklB;gbkey=Gene;gene=fklB;gene_biotype=protein_coding;locus_tag=AC56_RS00935;old_locus_tag=AC56_4734
NZ_JJLS01000300.1	Protein Homology	CDS	43229	43849	.	+	0	ID=cds-WP_000211237.1;Parent=gene-AC56_RS00935;Dbxref=GenBank:WP_000211237.1;Name=WP_000211237.1;gbkey=CDS;gene=fklB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015742582.1;locus_tag=AC56_RS00935;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000211237.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	44158	45570	.	+	.	ID=gene-AC56_RS00930;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=AC56_RS00930;old_locus_tag=AC56_4735
NZ_JJLS01000300.1	Protein Homology	CDS	44158	45570	.	+	0	ID=cds-WP_000228346.1;Parent=gene-AC56_RS00930;Dbxref=GenBank:WP_000228346.1;Name=WP_000228346.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=cycA;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313213.1;locus_tag=AC56_RS00930;product=D-serine/D-alanine/glycine transporter;protein_id=WP_000228346.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	45615	46277	.	-	.	ID=gene-AC56_RS00925;Name=ytfE;gbkey=Gene;gene=ytfE;gene_biotype=protein_coding;locus_tag=AC56_RS00925;old_locus_tag=AC56_4736
NZ_JJLS01000300.1	Protein Homology	CDS	45615	46277	.	-	0	ID=cds-WP_000331456.1;Parent=gene-AC56_RS00925;Dbxref=GenBank:WP_000331456.1;Name=WP_000331456.1;gbkey=CDS;gene=ytfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418630.1;locus_tag=AC56_RS00925;product=iron-sulfur cluster repair protein YtfE;protein_id=WP_000331456.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	46385	47350	.	-	.	ID=gene-AC56_RS00920;Name=ytfF;gbkey=Gene;gene=ytfF;gene_biotype=protein_coding;locus_tag=AC56_RS00920;old_locus_tag=AC56_4737
NZ_JJLS01000300.1	Protein Homology	CDS	46385	47350	.	-	0	ID=cds-WP_001295194.1;Parent=gene-AC56_RS00920;Dbxref=GenBank:WP_001295194.1;Name=WP_001295194.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ytfF;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709987.2;locus_tag=AC56_RS00920;product=DMT family transporter;protein_id=WP_001295194.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	47459	48319	.	-	.	ID=gene-AC56_RS00915;Name=qorB;gbkey=Gene;gene=qorB;gene_biotype=protein_coding;locus_tag=AC56_RS00915;old_locus_tag=AC56_4738
NZ_JJLS01000300.1	Protein Homology	CDS	47459	48319	.	-	0	ID=cds-WP_032279320.1;Parent=gene-AC56_RS00915;Dbxref=GenBank:WP_032279320.1;Name=WP_032279320.1;gbkey=CDS;gene=qorB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001491469.1;locus_tag=AC56_RS00915;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_032279320.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	48408	48788	.	+	.	ID=gene-AC56_RS00910;Name=ytfH;gbkey=Gene;gene=ytfH;gene_biotype=protein_coding;locus_tag=AC56_RS00910;old_locus_tag=AC56_4739
NZ_JJLS01000300.1	Protein Homology	CDS	48408	48788	.	+	0	ID=cds-WP_000084622.1;Parent=gene-AC56_RS00910;Dbxref=GenBank:WP_000084622.1;Name=WP_000084622.1;Ontology_term=GO:0003677;gbkey=CDS;gene=ytfH;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418633.4;locus_tag=AC56_RS00910;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_000084622.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	48911	50854	.	-	.	ID=gene-AC56_RS00905;Name=cpdB;gbkey=Gene;gene=cpdB;gene_biotype=protein_coding;locus_tag=AC56_RS00905;old_locus_tag=AC56_4740
NZ_JJLS01000300.1	Protein Homology	CDS	48911	50854	.	-	0	ID=cds-WP_000589409.1;Parent=gene-AC56_RS00905;Dbxref=GenBank:WP_000589409.1;Name=WP_000589409.1;Ontology_term=GO:0009117,GO:0008663;gbkey=CDS;gene=cpdB;go_function=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418634.1;locus_tag=AC56_RS00905;product=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase;protein_id=WP_000589409.1;transl_table=11
NZ_JJLS01000300.1	RefSeq	gene	50958	51316	.	-	.	ID=gene-AC56_RS00900;Name=AC56_RS00900;end_range=51316,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS00900;old_locus_tag=AC56_4741;partial=true
NZ_JJLS01000300.1	Protein Homology	CDS	50958	51316	.	-	2	ID=cds-WP_021551997.1;Parent=gene-AC56_RS00900;Dbxref=GenBank:WP_021551997.1;Name=WP_021551997.1;Ontology_term=GO:0004803;end_range=51316,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS00900;partial=true;product=IS1 family transposase;protein_id=WP_021551997.1;transl_table=11
##sequence-region NZ_JJLS01000301.1 1 64728
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000301.1	RefSeq	region	1	64728	.	+	.	ID=NZ_JJLS01000301.1:1..64728;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000301.1	RefSeq	pseudogene	1	398	.	-	.	ID=gene-AC56_RS0127505;Name=AC56_RS0127505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0127505;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000301.1	Protein Homology	CDS	1	398	.	-	0	ID=cds-AC56_RS0127505;Parent=gene-AC56_RS0127505;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC56_RS0127505;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	563	1303	.	+	.	ID=gene-AC56_RS00895;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=AC56_RS00895;old_locus_tag=AC56_4743
NZ_JJLS01000301.1	Protein Homology	CDS	563	1303	.	+	0	ID=cds-WP_000886900.1;Parent=gene-AC56_RS00895;Dbxref=GenBank:WP_000886900.1;Name=WP_000886900.1;Ontology_term=GO:0000287,GO:0008441;gbkey=CDS;gene=cysQ;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313219.1;locus_tag=AC56_RS00895;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_000886900.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	1293	1850	.	-	.	ID=gene-AC56_RS00890;Name=ytfJ;gbkey=Gene;gene=ytfJ;gene_biotype=protein_coding;locus_tag=AC56_RS00890;old_locus_tag=AC56_4744
NZ_JJLS01000301.1	Protein Homology	CDS	1293	1850	.	-	0	ID=cds-WP_000175286.1;Parent=gene-AC56_RS00890;Dbxref=GenBank:WP_000175286.1;Name=WP_000175286.1;gbkey=CDS;gene=ytfJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001498728.1;locus_tag=AC56_RS00890;product=YtfJ family protein;protein_id=WP_000175286.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	2175	2381	.	+	.	ID=gene-AC56_RS00885;Name=ytfK;gbkey=Gene;gene=ytfK;gene_biotype=protein_coding;locus_tag=AC56_RS00885;old_locus_tag=AC56_4745
NZ_JJLS01000301.1	Protein Homology	CDS	2175	2381	.	+	0	ID=cds-WP_000689228.1;Parent=gene-AC56_RS00885;Dbxref=GenBank:WP_000689228.1;Name=WP_000689228.1;gbkey=CDS;gene=ytfK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966176.1;locus_tag=AC56_RS00885;product=DUF1107 domain-containing protein;protein_id=WP_000689228.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	2443	3786	.	-	.	ID=gene-AC56_RS00880;Name=paeA;gbkey=Gene;gene=paeA;gene_biotype=protein_coding;locus_tag=AC56_RS00880;old_locus_tag=AC56_4746
NZ_JJLS01000301.1	Protein Homology	CDS	2443	3786	.	-	0	ID=cds-WP_000935036.1;Parent=gene-AC56_RS00880;Dbxref=GenBank:WP_000935036.1;Name=WP_000935036.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;gene=paeA;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313223.1;locus_tag=AC56_RS00880;product=hemolysin family protein;protein_id=WP_000935036.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	4109	4747	.	-	.	ID=gene-AC56_RS00875;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=AC56_RS00875;old_locus_tag=AC56_4747
NZ_JJLS01000301.1	Protein Homology	CDS	4109	4747	.	-	0	ID=cds-WP_001295196.1;Parent=gene-AC56_RS00875;Dbxref=GenBank:WP_001295196.1;Name=WP_001295196.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418640.1;locus_tag=AC56_RS00875;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_001295196.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	4953	6686	.	+	.	ID=gene-AC56_RS00865;Name=tamA;gbkey=Gene;gene=tamA;gene_biotype=protein_coding;locus_tag=AC56_RS00865;old_locus_tag=AC56_4749
NZ_JJLS01000301.1	Protein Homology	CDS	4953	6686	.	+	0	ID=cds-WP_001269316.1;Parent=gene-AC56_RS00865;Dbxref=GenBank:WP_001269316.1;Name=WP_001269316.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamA;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313225.1;locus_tag=AC56_RS00865;product=autotransporter assembly complex protein TamA;protein_id=WP_001269316.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	6683	10462	.	+	.	ID=gene-AC56_RS00860;Name=tamB;gbkey=Gene;gene=tamB;gene_biotype=protein_coding;locus_tag=AC56_RS00860;old_locus_tag=AC56_4750
NZ_JJLS01000301.1	Protein Homology	CDS	6683	10462	.	+	0	ID=cds-WP_000060911.1;Parent=gene-AC56_RS00860;Dbxref=GenBank:WP_000060911.1;Name=WP_000060911.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamB;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418642.1;locus_tag=AC56_RS00860;product=autotransporter assembly complex protein TamB;protein_id=WP_000060911.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	10465	10806	.	+	.	ID=gene-AC56_RS00855;Name=ytfP;gbkey=Gene;gene=ytfP;gene_biotype=protein_coding;locus_tag=AC56_RS00855;old_locus_tag=AC56_4751
NZ_JJLS01000301.1	Protein Homology	CDS	10465	10806	.	+	0	ID=cds-WP_001219160.1;Parent=gene-AC56_RS00855;Dbxref=GenBank:WP_001219160.1;Name=WP_001219160.1;Ontology_term=GO:0061929;gbkey=CDS;gene=ytfP;go_function=gamma-glutamylaminecyclotransferase activity|0061929||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313227.1;locus_tag=AC56_RS00855;product=gamma-glutamylcyclotransferase family protein;protein_id=WP_001219160.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	11018	11269	.	+	.	ID=gene-AC56_RS00850;Name=chpS;gbkey=Gene;gene=chpS;gene_biotype=protein_coding;locus_tag=AC56_RS00850;old_locus_tag=AC56_4752
NZ_JJLS01000301.1	Protein Homology	CDS	11018	11269	.	+	0	ID=cds-WP_001223208.1;Parent=gene-AC56_RS00850;Dbxref=GenBank:WP_001223208.1;Name=WP_001223208.1;gbkey=CDS;gene=chpS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418645.2;locus_tag=AC56_RS00850;product=type II toxin-antitoxin system antitoxin ChpS;protein_id=WP_001223208.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	11263	11613	.	+	.	ID=gene-AC56_RS00845;Name=chpB;gbkey=Gene;gene=chpB;gene_biotype=protein_coding;locus_tag=AC56_RS00845;old_locus_tag=AC56_4753
NZ_JJLS01000301.1	Protein Homology	CDS	11263	11613	.	+	0	ID=cds-WP_000239577.1;Parent=gene-AC56_RS00845;Dbxref=GenBank:WP_000239577.1;Name=WP_000239577.1;gbkey=CDS;gene=chpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418646.1;locus_tag=AC56_RS00845;product=endoribonuclease toxin ChpB;protein_id=WP_000239577.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	11693	12223	.	-	.	ID=gene-AC56_RS00840;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=AC56_RS00840;old_locus_tag=AC56_4754
NZ_JJLS01000301.1	Protein Homology	CDS	11693	12223	.	-	0	ID=cds-WP_000055075.1;Parent=gene-AC56_RS00840;Dbxref=GenBank:WP_000055075.1;Name=WP_000055075.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739810.1;locus_tag=AC56_RS00840;product=inorganic diphosphatase;protein_id=WP_000055075.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	12533	13489	.	+	.	ID=gene-AC56_RS00835;Name=ytfQ;gbkey=Gene;gene=ytfQ;gene_biotype=protein_coding;locus_tag=AC56_RS00835;old_locus_tag=AC56_4756
NZ_JJLS01000301.1	Protein Homology	CDS	12533	13489	.	+	0	ID=cds-WP_000265913.1;Parent=gene-AC56_RS00835;Dbxref=GenBank:WP_000265913.1;Name=WP_000265913.1;gbkey=CDS;gene=ytfQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418648.1;locus_tag=AC56_RS00835;product=galactofuranose ABC transporter substrate-binding protein YtfQ;protein_id=WP_000265913.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	13629	15131	.	+	.	ID=gene-AC56_RS00830;Name=ytfR;gbkey=Gene;gene=ytfR;gene_biotype=protein_coding;locus_tag=AC56_RS00830;old_locus_tag=AC56_4757
NZ_JJLS01000301.1	Protein Homology	CDS	13629	15131	.	+	0	ID=cds-WP_000205805.1;Parent=gene-AC56_RS00830;Dbxref=GenBank:WP_000205805.1;Name=WP_000205805.1;Ontology_term=GO:0042875,GO:0103116;gbkey=CDS;gene=ytfR;go_function=ABC-type D-galactofuranose transporter|0103116||IEA;go_process=D-galactonate transmembrane transport|0042875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026286.1;locus_tag=AC56_RS00830;product=galactofuranose ABC transporter%2C ATP-binding protein YtfR;protein_id=WP_000205805.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	15145	16167	.	+	.	ID=gene-AC56_RS00825;Name=ytfT;gbkey=Gene;gene=ytfT;gene_biotype=protein_coding;locus_tag=AC56_RS00825;old_locus_tag=AC56_4758
NZ_JJLS01000301.1	Protein Homology	CDS	15145	16167	.	+	0	ID=cds-WP_032279325.1;Parent=gene-AC56_RS00825;Dbxref=GenBank:WP_032279325.1;Name=WP_032279325.1;Ontology_term=GO:0042875,GO:0103116;gbkey=CDS;gene=ytfT;go_function=ABC-type D-galactofuranose transporter|0103116||IEA;go_process=D-galactonate transmembrane transport|0042875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313234.2;locus_tag=AC56_RS00825;product=galactofuranose ABC transporter%2C ATP-binding protein YtfT;protein_id=WP_032279325.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	16154	17149	.	+	.	ID=gene-AC56_RS00820;Name=yjfF;gbkey=Gene;gene=yjfF;gene_biotype=protein_coding;locus_tag=AC56_RS00820;old_locus_tag=AC56_4759
NZ_JJLS01000301.1	Protein Homology	CDS	16154	17149	.	+	0	ID=cds-WP_000596015.1;Parent=gene-AC56_RS00820;Dbxref=GenBank:WP_000596015.1;Name=WP_000596015.1;Ontology_term=GO:0042875,GO:0103116,GO:0016020;gbkey=CDS;gene=yjfF;go_component=membrane|0016020||IEA;go_function=ABC-type D-galactofuranose transporter|0103116||IEA;go_process=D-galactonate transmembrane transport|0042875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418652.2;locus_tag=AC56_RS00820;product=galactofuranose ABC transporter%2C permease protein YjfF;protein_id=WP_000596015.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	17182	18180	.	-	.	ID=gene-AC56_RS00815;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=AC56_RS00815;old_locus_tag=AC56_4760
NZ_JJLS01000301.1	Protein Homology	CDS	17182	18180	.	-	0	ID=cds-WP_000853753.1;Parent=gene-AC56_RS00815;Dbxref=GenBank:WP_000853753.1;Name=WP_000853753.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;gene=fbp;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233757.1;locus_tag=AC56_RS00815;product=class 1 fructose-bisphosphatase;protein_id=WP_000853753.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	18356	19729	.	+	.	ID=gene-AC56_RS00810;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=AC56_RS00810;old_locus_tag=AC56_4762
NZ_JJLS01000301.1	Protein Homology	CDS	18356	19729	.	+	0	ID=cds-WP_001219814.1;Parent=gene-AC56_RS00810;Dbxref=GenBank:WP_001219814.1;Name=WP_001219814.1;Ontology_term=GO:0009252,GO:0071555,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709968.1;locus_tag=AC56_RS00810;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_001219814.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	19885	20436	.	-	.	ID=gene-AC56_RS00805;Name=yjgA;gbkey=Gene;gene=yjgA;gene_biotype=protein_coding;locus_tag=AC56_RS00805;old_locus_tag=AC56_4763
NZ_JJLS01000301.1	Protein Homology	CDS	19885	20436	.	-	0	ID=cds-WP_000166270.1;Parent=gene-AC56_RS00805;Dbxref=GenBank:WP_000166270.1;Name=WP_000166270.1;Ontology_term=GO:0042254;gbkey=CDS;gene=yjgA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313238.1;locus_tag=AC56_RS00805;product=ribosome biogenesis factor YjgA;protein_id=WP_000166270.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	20530	21882	.	+	.	ID=gene-AC56_RS00800;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=AC56_RS00800;old_locus_tag=AC56_4764
NZ_JJLS01000301.1	Protein Homology	CDS	20530	21882	.	+	0	ID=cds-WP_001162171.1;Parent=gene-AC56_RS00800;Dbxref=GenBank:WP_001162171.1;Name=WP_001162171.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313239.1;locus_tag=AC56_RS00800;product=metalloprotease PmbA;protein_id=WP_001162171.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	22066	22452	.	+	.	ID=gene-AC56_RS00795;Name=cybC;gbkey=Gene;gene=cybC;gene_biotype=protein_coding;locus_tag=AC56_RS00795;old_locus_tag=AC56_4765
NZ_JJLS01000301.1	Protein Homology	CDS	22066	22452	.	+	0	ID=cds-WP_001232245.1;Parent=gene-AC56_RS00795;Dbxref=GenBank:WP_001232245.1;Name=WP_001232245.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0042597;gbkey=CDS;gene=cybC;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313240.2;locus_tag=AC56_RS00795;product=cytochrome b562;protein_id=WP_001232245.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	22497	22961	.	-	.	ID=gene-AC56_RS00790;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=AC56_RS00790;old_locus_tag=AC56_4766
NZ_JJLS01000301.1	Protein Homology	CDS	22497	22961	.	-	0	ID=cds-WP_001106233.1;Parent=gene-AC56_RS00790;Dbxref=GenBank:WP_001106233.1;Name=WP_001106233.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313241.1;locus_tag=AC56_RS00790;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=WP_001106233.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	23119	25257	.	-	.	ID=gene-AC56_RS00785;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=AC56_RS00785;old_locus_tag=AC56_4767
NZ_JJLS01000301.1	Protein Homology	CDS	23119	25257	.	-	0	ID=cds-WP_000187777.1;Parent=gene-AC56_RS00785;Dbxref=GenBank:WP_000187777.1;Name=WP_000187777.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase (thioredoxin) activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418659.1;locus_tag=AC56_RS00785;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_000187777.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	25651	27306	.	-	.	ID=gene-AC56_RS00780;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=AC56_RS00780;old_locus_tag=AC56_4769
NZ_JJLS01000301.1	Protein Homology	CDS	25651	27306	.	-	0	ID=cds-WP_001336303.1;Parent=gene-AC56_RS00780;Dbxref=GenBank:WP_001336303.1;Name=WP_001336303.1;Ontology_term=GO:0005991,GO:0008788,GO:0005737;gbkey=CDS;gene=treC;go_component=cytoplasm|0005737||IEA;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418660.1;locus_tag=AC56_RS00780;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_001336303.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	27356	28777	.	-	.	ID=gene-AC56_RS00775;Name=treB;gbkey=Gene;gene=treB;gene_biotype=protein_coding;locus_tag=AC56_RS00775;old_locus_tag=AC56_4770
NZ_JJLS01000301.1	Protein Homology	CDS	27356	28777	.	-	0	ID=cds-WP_001299664.1;Parent=gene-AC56_RS00775;Dbxref=GenBank:WP_001299664.1;Name=WP_001299664.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treB;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313244.1;locus_tag=AC56_RS00775;product=PTS trehalose transporter subunit IIBC;protein_id=WP_001299664.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	28896	29843	.	-	.	ID=gene-AC56_RS00770;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=AC56_RS00770;old_locus_tag=AC56_4771
NZ_JJLS01000301.1	Protein Homology	CDS	28896	29843	.	-	0	ID=cds-WP_032279327.1;Parent=gene-AC56_RS00770;Dbxref=GenBank:WP_032279327.1;Name=WP_032279327.1;Ontology_term=GO:0005991,GO:0006355,GO:0045892,GO:0003677;gbkey=CDS;gene=treR;go_function=DNA binding|0003677||IEA;go_process=trehalose metabolic process|0005991||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418662.1;locus_tag=AC56_RS00770;product=trehalose operon repressor TreR;protein_id=WP_032279327.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	30028	30081	.	+	.	ID=gene-AC56_RS32470;Name=mgtL;gbkey=Gene;gene=mgtL;gene_biotype=protein_coding;locus_tag=AC56_RS32470
NZ_JJLS01000301.1	Protein Homology	CDS	30028	30081	.	+	0	ID=cds-WP_001387276.1;Parent=gene-AC56_RS32470;Dbxref=GenBank:WP_001387276.1;Name=WP_001387276.1;gbkey=CDS;gene=mgtL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003933616.1;locus_tag=AC56_RS32470;product=mgtA regulatory leader peptide MgtL;protein_id=WP_001387276.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	30222	32918	.	+	.	ID=gene-AC56_RS00765;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=AC56_RS00765;old_locus_tag=AC56_4772
NZ_JJLS01000301.1	Protein Homology	CDS	30222	32918	.	+	0	ID=cds-WP_000471897.1;Parent=gene-AC56_RS00765;Dbxref=GenBank:WP_000471897.1;Name=WP_000471897.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313246.1;locus_tag=AC56_RS00765;product=magnesium-translocating P-type ATPase;protein_id=WP_000471897.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	33124	33510	.	-	.	ID=gene-AC56_RS00760;Name=ridA;gbkey=Gene;gene=ridA;gene_biotype=protein_coding;locus_tag=AC56_RS00760;old_locus_tag=AC56_4773
NZ_JJLS01000301.1	Protein Homology	CDS	33124	33510	.	-	0	ID=cds-WP_000047538.1;Parent=gene-AC56_RS00760;Dbxref=GenBank:WP_000047538.1;Name=WP_000047538.1;gbkey=CDS;gene=ridA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418664.2;locus_tag=AC56_RS00760;product=2-iminobutanoate/2-iminopropanoate deaminase;protein_id=WP_000047538.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	33583	34044	.	-	.	ID=gene-AC56_RS00755;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=AC56_RS00755;old_locus_tag=AC56_4774
NZ_JJLS01000301.1	Protein Homology	CDS	33583	34044	.	-	0	ID=cds-WP_000148581.1;Parent=gene-AC56_RS00755;Dbxref=GenBank:WP_000148581.1;Name=WP_000148581.1;Ontology_term=GO:0006207,GO:0009347;gbkey=CDS;gene=pyrI;go_component=aspartate carbamoyltransferase complex|0009347||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000148566.1;locus_tag=AC56_RS00755;product=aspartate carbamoyltransferase regulatory subunit;protein_id=WP_000148581.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	34057	34992	.	-	.	ID=gene-AC56_RS00750;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=AC56_RS00750;old_locus_tag=AC56_4775
NZ_JJLS01000301.1	Protein Homology	CDS	34057	34992	.	-	0	ID=cds-WP_032179348.1;Parent=gene-AC56_RS00750;Dbxref=GenBank:WP_032179348.1;Name=WP_032179348.1;Ontology_term=GO:0006207,GO:0004070;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313249.1;locus_tag=AC56_RS00750;product=aspartate carbamoyltransferase;protein_id=WP_032179348.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	34996	35130	.	-	.	ID=gene-AC56_RS0127510;Name=pyrL;gbkey=Gene;gene=pyrL;gene_biotype=protein_coding;locus_tag=AC56_RS0127510
NZ_JJLS01000301.1	Protein Homology	CDS	34996	35130	.	-	0	ID=cds-WP_001296693.1;Parent=gene-AC56_RS0127510;Dbxref=GenBank:WP_001296693.1;Name=WP_001296693.1;gbkey=CDS;gene=pyrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313250.1;locus_tag=AC56_RS0127510;product=pyr operon leader peptide;protein_id=WP_001296693.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	35411	35806	.	-	.	ID=gene-AC56_RS00745;Name=yjgH;gbkey=Gene;gene=yjgH;gene_biotype=protein_coding;locus_tag=AC56_RS00745;old_locus_tag=AC56_4776
NZ_JJLS01000301.1	Protein Homology	CDS	35411	35806	.	-	0	ID=cds-WP_000230274.1;Parent=gene-AC56_RS00745;Dbxref=GenBank:WP_000230274.1;Name=WP_000230274.1;gbkey=CDS;gene=yjgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418669.1;locus_tag=AC56_RS00745;product=RidA family protein;protein_id=WP_000230274.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	35937	36650	.	-	.	ID=gene-AC56_RS00740;Name=bdcA;gbkey=Gene;gene=bdcA;gene_biotype=protein_coding;locus_tag=AC56_RS00740;old_locus_tag=AC56_4778
NZ_JJLS01000301.1	Protein Homology	CDS	35937	36650	.	-	0	ID=cds-WP_000500685.1;Parent=gene-AC56_RS00740;Dbxref=GenBank:WP_000500685.1;Name=WP_000500685.1;Ontology_term=GO:0016491;gbkey=CDS;gene=bdcA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313253.1;locus_tag=AC56_RS00740;product=SDR family oxidoreductase;protein_id=WP_000500685.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	36721	37314	.	+	.	ID=gene-AC56_RS00735;Name=bdcR;gbkey=Gene;gene=bdcR;gene_biotype=protein_coding;locus_tag=AC56_RS00735;old_locus_tag=AC56_4779
NZ_JJLS01000301.1	Protein Homology	CDS	36721	37314	.	+	0	ID=cds-WP_000256663.1;Parent=gene-AC56_RS00735;Dbxref=GenBank:WP_000256663.1;Name=WP_000256663.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=bdcR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313255.2;locus_tag=AC56_RS00735;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000256663.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	37459	37911	.	+	.	ID=gene-AC56_RS00730;Name=tabA;gbkey=Gene;gene=tabA;gene_biotype=protein_coding;locus_tag=AC56_RS00730;old_locus_tag=AC56_4780
NZ_JJLS01000301.1	Protein Homology	CDS	37459	37911	.	+	0	ID=cds-WP_001336307.1;Parent=gene-AC56_RS00730;Dbxref=GenBank:WP_001336307.1;Name=WP_001336307.1;gbkey=CDS;gene=tabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313256.2;locus_tag=AC56_RS00730;product=toxin-antitoxin biofilm protein TabA;protein_id=WP_001336307.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	38034	39686	.	+	.	ID=gene-AC56_RS00725;Name=AC56_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS00725;old_locus_tag=AC56_4781
NZ_JJLS01000301.1	Protein Homology	CDS	38034	39686	.	+	0	ID=cds-WP_000036440.1;Parent=gene-AC56_RS00725;Dbxref=GenBank:WP_000036440.1;Name=WP_000036440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036417.1;locus_tag=AC56_RS00725;product=hypothetical protein;protein_id=WP_000036440.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	39759	40763	.	-	.	ID=gene-AC56_RS00720;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=AC56_RS00720;old_locus_tag=AC56_4782
NZ_JJLS01000301.1	Protein Homology	CDS	39759	40763	.	-	0	ID=cds-WP_000012907.1;Parent=gene-AC56_RS00720;Dbxref=GenBank:WP_000012907.1;Name=WP_000012907.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313258.1;locus_tag=AC56_RS00720;product=ornithine carbamoyltransferase;protein_id=WP_000012907.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	40925	41341	.	+	.	ID=gene-AC56_RS00715;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=AC56_RS00715;old_locus_tag=AC56_4783
NZ_JJLS01000301.1	Protein Homology	CDS	40925	41341	.	+	0	ID=cds-WP_000002953.1;Parent=gene-AC56_RS00715;Dbxref=GenBank:WP_000002953.1;Name=WP_000002953.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313259.1;locus_tag=AC56_RS00715;product=ribonuclease E inhibitor RraB;protein_id=WP_000002953.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	41387	41890	.	-	.	ID=gene-AC56_RS00710;Name=yjgM;gbkey=Gene;gene=yjgM;gene_biotype=protein_coding;locus_tag=AC56_RS00710;old_locus_tag=AC56_4784
NZ_JJLS01000301.1	Protein Homology	CDS	41387	41890	.	-	0	ID=cds-WP_001059397.1;Parent=gene-AC56_RS00710;Dbxref=GenBank:WP_001059397.1;Name=WP_001059397.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;gene=yjgM;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313260.2;locus_tag=AC56_RS00710;product=GNAT family N-acetyltransferase;protein_id=WP_001059397.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	42083	43279	.	+	.	ID=gene-AC56_RS00705;Name=yjgN;gbkey=Gene;gene=yjgN;gene_biotype=protein_coding;locus_tag=AC56_RS00705;old_locus_tag=AC56_4785
NZ_JJLS01000301.1	Protein Homology	CDS	42083	43279	.	+	0	ID=cds-WP_000079628.1;Parent=gene-AC56_RS00705;Dbxref=GenBank:WP_000079628.1;Name=WP_000079628.1;gbkey=CDS;gene=yjgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313261.1;locus_tag=AC56_RS00705;product=YjgN family protein;protein_id=WP_000079628.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	43335	46190	.	-	.	ID=gene-AC56_RS00700;Name=valS;gbkey=Gene;gene=valS;gene_biotype=protein_coding;locus_tag=AC56_RS00700;old_locus_tag=AC56_4786
NZ_JJLS01000301.1	Protein Homology	CDS	43335	46190	.	-	0	ID=cds-WP_032241292.1;Parent=gene-AC56_RS00700;Dbxref=GenBank:WP_032241292.1;Name=WP_032241292.1;Ontology_term=GO:0006438,GO:0000166,GO:0004832,GO:0005524;gbkey=CDS;gene=valS;go_function=nucleotide binding|0000166||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=AC56_RS00700;product=valine--tRNA ligase;protein_id=WP_032241292.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	46190	46633	.	-	.	ID=gene-AC56_RS00695;Name=holC;gbkey=Gene;gene=holC;gene_biotype=protein_coding;locus_tag=AC56_RS00695;old_locus_tag=AC56_4787
NZ_JJLS01000301.1	Protein Homology	CDS	46190	46633	.	-	0	ID=cds-WP_000786393.1;Parent=gene-AC56_RS00695;Dbxref=GenBank:WP_000786393.1;Name=WP_000786393.1;gbkey=CDS;gene=holC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098129.1;locus_tag=AC56_RS00695;product=DNA polymerase III subunit chi;protein_id=WP_000786393.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	46987	48498	.	-	.	ID=gene-AC56_RS00690;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=AC56_RS00690;old_locus_tag=AC56_4788
NZ_JJLS01000301.1	Protein Homology	CDS	46987	48498	.	-	0	ID=cds-WP_000397144.1;Parent=gene-AC56_RS00690;Dbxref=GenBank:WP_000397144.1;Name=WP_000397144.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepA;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313264.1;locus_tag=AC56_RS00690;product=leucyl aminopeptidase;protein_id=WP_000397144.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	48652	48702	.	+	.	ID=gene-AC56_RS33475;Name=ytgA;gbkey=Gene;gene=ytgA;gene_biotype=protein_coding;locus_tag=AC56_RS33475
NZ_JJLS01000301.1	Protein Homology	CDS	48652	48702	.	+	0	ID=cds-WP_211180521.1;Parent=gene-AC56_RS33475;Dbxref=GenBank:WP_211180521.1;Name=WP_211180521.1;gbkey=CDS;gene=ytgA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051214.1;locus_tag=AC56_RS33475;product=protein YtgA;protein_id=WP_211180521.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	48765	49865	.	+	.	ID=gene-AC56_RS00685;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=AC56_RS00685;old_locus_tag=AC56_4790
NZ_JJLS01000301.1	Protein Homology	CDS	48765	49865	.	+	0	ID=cds-WP_000584114.1;Parent=gene-AC56_RS00685;Dbxref=GenBank:WP_000584114.1;Name=WP_000584114.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313265.1;locus_tag=AC56_RS00685;product=LPS export ABC transporter permease LptF;protein_id=WP_000584114.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	49865	50947	.	+	.	ID=gene-AC56_RS00680;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=AC56_RS00680;old_locus_tag=AC56_4791
NZ_JJLS01000301.1	Protein Homology	CDS	49865	50947	.	+	0	ID=cds-WP_001295681.1;Parent=gene-AC56_RS00680;Dbxref=GenBank:WP_001295681.1;Name=WP_001295681.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313266.2;locus_tag=AC56_RS00680;product=LPS export ABC transporter permease LptG;protein_id=WP_001295681.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	51082	52611	.	-	.	ID=gene-AC56_RS00675;Name=yjgR;gbkey=Gene;gene=yjgR;gene_biotype=protein_coding;locus_tag=AC56_RS00675;old_locus_tag=AC56_4792
NZ_JJLS01000301.1	Protein Homology	CDS	51082	52611	.	-	0	ID=cds-WP_032279331.1;Parent=gene-AC56_RS00675;Dbxref=GenBank:WP_032279331.1;Name=WP_032279331.1;Ontology_term=GO:0005524;gbkey=CDS;gene=yjgR;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016244212.1;locus_tag=AC56_RS00675;product=helicase HerA-like C-terminal domain-containing protein;protein_id=WP_032279331.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	52689	53687	.	-	.	ID=gene-AC56_RS00670;Name=idnR;gbkey=Gene;gene=idnR;gene_biotype=protein_coding;gene_synonym=gntH,yjgS;locus_tag=AC56_RS00670;old_locus_tag=AC56_4793
NZ_JJLS01000301.1	Protein Homology	CDS	52689	53687	.	-	0	ID=cds-WP_001309159.1;Parent=gene-AC56_RS00670;Dbxref=GenBank:WP_001309159.1;Name=WP_001309159.1;Ontology_term=GO:0006355,GO:0019521,GO:0003700;gbkey=CDS;gene=idnR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,D-gluconate metabolic process|0019521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418685.1;locus_tag=AC56_RS00670;product=DNA-binding transcriptional regulator IdnR;protein_id=WP_001309159.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	53754	55073	.	-	.	ID=gene-AC56_RS00665;Name=idnT;gbkey=Gene;gene=idnT;gene_biotype=protein_coding;locus_tag=AC56_RS00665;old_locus_tag=AC56_4794
NZ_JJLS01000301.1	Protein Homology	CDS	53754	55073	.	-	0	ID=cds-WP_001128347.1;Parent=gene-AC56_RS00665;Dbxref=GenBank:WP_001128347.1;Name=WP_001128347.1;gbkey=CDS;gene=idnT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418686.1;locus_tag=AC56_RS00665;product=gnt-II system L-idonate transporter;protein_id=WP_001128347.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	55136	55900	.	-	.	ID=gene-AC56_RS00660;Name=idnO;gbkey=Gene;gene=idnO;gene_biotype=protein_coding;locus_tag=AC56_RS00660;old_locus_tag=AC56_4795
NZ_JJLS01000301.1	Protein Homology	CDS	55136	55900	.	-	0	ID=cds-WP_000998695.1;Parent=gene-AC56_RS00660;Dbxref=GenBank:WP_000998695.1;Name=WP_000998695.1;gbkey=CDS;gene=idnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418687.1;locus_tag=AC56_RS00660;product=gluconate 5-dehydrogenase;protein_id=WP_000998695.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	55924	56955	.	-	.	ID=gene-AC56_RS00655;Name=idnD;gbkey=Gene;gene=idnD;gene_biotype=protein_coding;locus_tag=AC56_RS00655;old_locus_tag=AC56_4796
NZ_JJLS01000301.1	Protein Homology	CDS	55924	56955	.	-	0	ID=cds-WP_001197411.1;Parent=gene-AC56_RS00655;Dbxref=GenBank:WP_001197411.1;Name=WP_001197411.1;gbkey=CDS;gene=idnD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418688.1;locus_tag=AC56_RS00655;product=L-idonate 5-dehydrogenase;protein_id=WP_001197411.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	57172	57735	.	+	.	ID=gene-AC56_RS00650;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=AC56_RS00650;old_locus_tag=AC56_4797
NZ_JJLS01000301.1	Protein Homology	CDS	57172	57735	.	+	0	ID=cds-WP_000896738.1;Parent=gene-AC56_RS00650;Dbxref=GenBank:WP_000896738.1;Name=WP_000896738.1;gbkey=CDS;gene=idnK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418689.1;locus_tag=AC56_RS00650;product=gluconokinase;protein_id=WP_000896738.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	57739	58758	.	-	.	ID=gene-AC56_RS00645;Name=ahr;gbkey=Gene;gene=ahr;gene_biotype=protein_coding;locus_tag=AC56_RS00645;old_locus_tag=AC56_4798
NZ_JJLS01000301.1	Protein Homology	CDS	57739	58758	.	-	0	ID=cds-WP_001318460.1;Parent=gene-AC56_RS00645;Dbxref=GenBank:WP_001318460.1;Name=WP_001318460.1;Ontology_term=GO:0006631,GO:0008106,GO:0016616;gbkey=CDS;gene=ahr;go_function=alcohol dehydrogenase (NADP+) activity|0008106||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418690.4;locus_tag=AC56_RS00645;product=NADPH-dependent aldehyde reductase Ahr;protein_id=WP_001318460.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	58954	59038	.	+	.	ID=gene-AC56_RS00640;Name=AC56_RS00640;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC56_RS00640;old_locus_tag=AC56_4800
NZ_JJLS01000301.1	tRNAscan-SE	tRNA	58954	59038	.	+	.	ID=rna-AC56_RS00640;Parent=gene-AC56_RS00640;anticodon=(pos:58988..58990);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS00640;product=tRNA-Leu
NZ_JJLS01000301.1	tRNAscan-SE	exon	58954	59038	.	+	.	ID=exon-AC56_RS00640-1;Parent=rna-AC56_RS00640;anticodon=(pos:58988..58990);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC56_RS00640;product=tRNA-Leu
NZ_JJLS01000301.1	RefSeq	gene	59281	60489	.	+	.	ID=gene-AC56_RS00635;Name=AC56_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS00635;old_locus_tag=AC56_4801
NZ_JJLS01000301.1	Protein Homology	CDS	59281	60489	.	+	0	ID=cds-WP_248698492.1;Parent=gene-AC56_RS00635;Dbxref=GenBank:WP_248698492.1;Name=WP_248698492.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001642584.1;locus_tag=AC56_RS00635;product=tyrosine-type recombinase/integrase;protein_id=WP_248698492.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	pseudogene	60806	61989	.	-	.	ID=gene-AC56_RS30680;Name=AC56_RS30680;end_range=61989,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS30680;partial=true;pseudo=true
NZ_JJLS01000301.1	Protein Homology	CDS	60806	61989	.	-	0	ID=cds-AC56_RS30680;Parent=gene-AC56_RS30680;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009244,GO:1900727,GO:0016776;end_range=61989,.;gbkey=CDS;go_function=phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA,osmoregulated periplasmic glucan biosynthetic process|1900727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001535067.1;locus_tag=AC56_RS30680;partial=true;product=phosphoethanolamine transferase;pseudo=true;transl_table=11
NZ_JJLS01000301.1	RefSeq	pseudogene	62573	62802	.	+	.	ID=gene-AC56_RS30690;Name=AC56_RS30690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS30690;partial=true;pseudo=true;start_range=.,62573
NZ_JJLS01000301.1	Protein Homology	CDS	62573	62802	.	+	0	ID=cds-AC56_RS30690;Parent=gene-AC56_RS30690;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354984.1;locus_tag=AC56_RS30690;partial=true;product=transposase domain-containing protein;pseudo=true;start_range=.,62573;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	63145	63288	.	+	.	ID=gene-AC56_RS00620;Name=AC56_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS00620;old_locus_tag=AC56_4805
NZ_JJLS01000301.1	GeneMarkS-2+	CDS	63145	63288	.	+	0	ID=cds-WP_000050905.1;Parent=gene-AC56_RS00620;Dbxref=GenBank:WP_000050905.1;Name=WP_000050905.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS00620;product=hypothetical protein;protein_id=WP_000050905.1;transl_table=11
NZ_JJLS01000301.1	RefSeq	gene	63316	64662	.	-	.	ID=gene-AC56_RS00615;Name=AC56_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS00615;old_locus_tag=AC56_4806
NZ_JJLS01000301.1	Protein Homology	CDS	63316	64662	.	-	0	ID=cds-WP_000483767.1-3;Parent=gene-AC56_RS00615;Dbxref=GenBank:WP_000483767.1;Name=WP_000483767.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707145.1;locus_tag=AC56_RS00615;product=IS4-like element IS4 family transposase;protein_id=WP_000483767.1;transl_table=11
##sequence-region NZ_JJLS01000302.1 1 37786
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000302.1	RefSeq	region	1	37786	.	+	.	ID=NZ_JJLS01000302.1:1..37786;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000302.1	RefSeq	pseudogene	1	295	.	+	.	ID=gene-AC56_RS00610;Name=AC56_RS00610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS00610;old_locus_tag=AC56_4807;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000302.1	Protein Homology	CDS	1	295	.	+	1	ID=cds-AC56_RS00610;Parent=gene-AC56_RS00610;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309422.1;locus_tag=AC56_RS00610;partial=true;product=GTPase family protein;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000302.1	RefSeq	gene	667	3786	.	+	.	ID=gene-AC56_RS00605;Name=agn43;gbkey=Gene;gene=agn43;gene_biotype=protein_coding;gene_synonym=flu;locus_tag=AC56_RS00605;old_locus_tag=AC56_4809
NZ_JJLS01000302.1	Protein Homology	CDS	667	3786	.	+	0	ID=cds-WP_000820500.1;Parent=gene-AC56_RS00605;Dbxref=GenBank:WP_000820500.1;Name=WP_000820500.1;gbkey=CDS;gene=agn43;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026164.1;locus_tag=AC56_RS00605;product=autotransporter adhesin Ag43;protein_id=WP_000820500.1;transl_table=11
NZ_JJLS01000302.1	RefSeq	pseudogene	3857	4052	.	+	.	ID=gene-AC56_RS00600;Name=AC56_RS00600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS00600;old_locus_tag=AC56_4810;pseudo=true
NZ_JJLS01000302.1	Protein Homology	CDS	3857	4052	.	+	0	ID=cds-AC56_RS00600;Parent=gene-AC56_RS00600;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117568.1;locus_tag=AC56_RS00600;product=DUF905 family protein;pseudo=true;transl_table=11
NZ_JJLS01000302.1	RefSeq	gene	4170	4988	.	+	.	ID=gene-AC56_RS00595;Name=AC56_RS00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS00595;old_locus_tag=AC56_4811
NZ_JJLS01000302.1	Protein Homology	CDS	4170	4988	.	+	0	ID=cds-WP_001234656.1;Parent=gene-AC56_RS00595;Dbxref=GenBank:WP_001234656.1;Name=WP_001234656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310828.1;locus_tag=AC56_RS00595;product=DUF932 domain-containing protein;protein_id=WP_001234656.1;transl_table=11
NZ_JJLS01000302.1	RefSeq	gene	5330	5803	.	+	.	ID=gene-AC56_RS00590;Name=AC56_RS00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS00590;old_locus_tag=AC56_4812
NZ_JJLS01000302.1	Protein Homology	CDS	5330	5803	.	+	0	ID=cds-WP_001350782.1;Parent=gene-AC56_RS00590;Dbxref=GenBank:WP_001350782.1;Name=WP_001350782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708769.2;locus_tag=AC56_RS00590;product=antirestriction protein;protein_id=WP_001350782.1;transl_table=11
NZ_JJLS01000302.1	RefSeq	gene	5819	6295	.	+	.	ID=gene-AC56_RS00585;Name=AC56_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS00585;old_locus_tag=AC56_4813
NZ_JJLS01000302.1	Protein Homology	CDS	5819	6295	.	+	0	ID=cds-WP_001186775.1;Parent=gene-AC56_RS00585;Dbxref=GenBank:WP_001186775.1;Name=WP_001186775.1;Ontology_term=GO:0006508,GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310830.1;locus_tag=AC56_RS00585;product=JAB domain-containing protein;protein_id=WP_001186775.1;transl_table=11
NZ_JJLS01000302.1	RefSeq	gene	6358	6579	.	+	.	ID=gene-AC56_RS00580;Name=AC56_RS00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS00580;old_locus_tag=AC56_4814
NZ_JJLS01000302.1	Protein Homology	CDS	6358	6579	.	+	0	ID=cds-WP_000692345.1;Parent=gene-AC56_RS00580;Dbxref=GenBank:WP_000692345.1;Name=WP_000692345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309431.1;locus_tag=AC56_RS00580;product=DUF987 domain-containing protein;protein_id=WP_000692345.1;transl_table=11
NZ_JJLS01000302.1	RefSeq	gene	6742	7110	.	+	.	ID=gene-AC56_RS0127535;Name=AC56_RS0127535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS0127535;old_locus_tag=AC56_4816
NZ_JJLS01000302.1	Protein Homology	CDS	6742	7110	.	+	0	ID=cds-WP_001295723.1;Parent=gene-AC56_RS0127535;Dbxref=GenBank:WP_001295723.1;Name=WP_001295723.1;Ontology_term=GO:0051495;gbkey=CDS;go_process=positive regulation of cytoskeleton organization|0051495||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280950.1;locus_tag=AC56_RS0127535;product=type IV toxin-antitoxin system YeeU family antitoxin;protein_id=WP_001295723.1;transl_table=11
NZ_JJLS01000302.1	RefSeq	pseudogene	7200	7298	.	+	.	ID=gene-AC56_RS30705;Name=AC56_RS30705;end_range=7298,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS30705;partial=true;pseudo=true
NZ_JJLS01000302.1	Protein Homology	CDS	7200	7298	.	+	0	ID=cds-AC56_RS30705;Parent=gene-AC56_RS30705;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=7298,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309433.1;locus_tag=AC56_RS30705;partial=true;product=TA system toxin CbtA family protein;pseudo=true;transl_table=11
NZ_JJLS01000302.1	RefSeq	gene	8038	9297	.	+	.	ID=gene-AC56_RS00570;Name=mtnK;gbkey=Gene;gene=mtnK;gene_biotype=protein_coding;locus_tag=AC56_RS00570;old_locus_tag=AC56_4817
NZ_JJLS01000302.1	Protein Homology	CDS	8038	9297	.	+	0	ID=cds-WP_000132327.1;Parent=gene-AC56_RS00570;Dbxref=GenBank:WP_000132327.1;Name=WP_000132327.1;Ontology_term=GO:0009086,GO:0046522;gbkey=CDS;gene=mtnK;go_function=S-methyl-5-thioribose kinase activity|0046522||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000132329.1;locus_tag=AC56_RS00570;product=S-methyl-5-thioribose kinase;protein_id=WP_000132327.1;transl_table=11
NZ_JJLS01000302.1	RefSeq	gene	9307	10422	.	+	.	ID=gene-AC56_RS00565;Name=mtnA;gbkey=Gene;gene=mtnA;gene_biotype=protein_coding;locus_tag=AC56_RS00565;old_locus_tag=AC56_4818
NZ_JJLS01000302.1	Protein Homology	CDS	9307	10422	.	+	0	ID=cds-WP_001022014.1;Parent=gene-AC56_RS00565;Dbxref=GenBank:WP_001022014.1;Name=WP_001022014.1;Ontology_term=GO:0019509,GO:0046523;gbkey=CDS;gene=mtnA;go_function=S-methyl-5-thioribose-1-phosphate isomerase activity|0046523||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001022014.1;locus_tag=AC56_RS00565;product=S-methyl-5-thioribose-1-phosphate isomerase;protein_id=WP_001022014.1;transl_table=11
NZ_JJLS01000302.1	RefSeq	gene	10453	11094	.	+	.	ID=gene-AC56_RS00560;Name=AC56_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS00560;old_locus_tag=AC56_4819
NZ_JJLS01000302.1	Protein Homology	CDS	10453	11094	.	+	0	ID=cds-WP_000439687.1;Parent=gene-AC56_RS00560;Dbxref=GenBank:WP_000439687.1;Name=WP_000439687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000439687.1;locus_tag=AC56_RS00560;product=L-fuculose-phosphate aldolase;protein_id=WP_000439687.1;transl_table=11
NZ_JJLS01000302.1	RefSeq	gene	11356	12201	.	+	.	ID=gene-AC56_RS00555;Name=AC56_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS00555;old_locus_tag=AC56_4820
NZ_JJLS01000302.1	Protein Homology	CDS	11356	12201	.	+	0	ID=cds-WP_016247886.1;Parent=gene-AC56_RS00555;Dbxref=GenBank:WP_016247886.1;Name=WP_016247886.1;Ontology_term=GO:0034219,GO:0015144,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016247886.1;locus_tag=AC56_RS00555;product=GRP family sugar transporter;protein_id=WP_016247886.1;transl_table=11
NZ_JJLS01000302.1	RefSeq	gene	12242	13228	.	-	.	ID=gene-AC56_RS00550;Name=yjhU;gbkey=Gene;gene=yjhU;gene_biotype=protein_coding;locus_tag=AC56_RS00550;old_locus_tag=AC56_4821
NZ_JJLS01000302.1	Protein Homology	CDS	12242	13228	.	-	0	ID=cds-WP_000373366.1;Parent=gene-AC56_RS00550;Dbxref=GenBank:WP_000373366.1;Name=WP_000373366.1;Ontology_term=GO:0006355,GO:0003677,GO:0030246;gbkey=CDS;gene=yjhU;go_function=DNA binding|0003677||IEA,carbohydrate binding|0030246||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418715.2;locus_tag=AC56_RS00550;product=sugar-binding transcriptional regulator;protein_id=WP_000373366.1;transl_table=11
NZ_JJLS01000302.1	RefSeq	gene	13575	14924	.	-	.	ID=gene-AC56_RS00545;Name=yjhF;gbkey=Gene;gene=yjhF;gene_biotype=protein_coding;locus_tag=AC56_RS00545;old_locus_tag=AC56_4823
NZ_JJLS01000302.1	Protein Homology	CDS	13575	14924	.	-	0	ID=cds-WP_001128363.1;Parent=gene-AC56_RS00545;Dbxref=GenBank:WP_001128363.1;Name=WP_001128363.1;gbkey=CDS;gene=yjhF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418716.1;locus_tag=AC56_RS00545;product=GntP family permease;protein_id=WP_001128363.1;transl_table=11
NZ_JJLS01000302.1	RefSeq	gene	15031	16998	.	-	.	ID=gene-AC56_RS00540;Name=yjhG;gbkey=Gene;gene=yjhG;gene_biotype=protein_coding;locus_tag=AC56_RS00540;old_locus_tag=AC56_4824
NZ_JJLS01000302.1	Protein Homology	CDS	15031	16998	.	-	0	ID=cds-WP_000116326.1;Parent=gene-AC56_RS00540;Dbxref=GenBank:WP_000116326.1;Name=WP_000116326.1;gbkey=CDS;gene=yjhG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418717.1;locus_tag=AC56_RS00540;product=xylonate dehydratase YjhG;protein_id=WP_000116326.1;transl_table=11
NZ_JJLS01000302.1	RefSeq	gene	17009	17914	.	-	.	ID=gene-AC56_RS00535;Name=yjhH;gbkey=Gene;gene=yjhH;gene_biotype=protein_coding;locus_tag=AC56_RS00535;old_locus_tag=AC56_4825
NZ_JJLS01000302.1	Protein Homology	CDS	17009	17914	.	-	0	ID=cds-WP_001335841.1;Parent=gene-AC56_RS00535;Dbxref=GenBank:WP_001335841.1;Name=WP_001335841.1;gbkey=CDS;gene=yjhH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418718.4;locus_tag=AC56_RS00535;product=dihydrodipicolinate synthase family protein;protein_id=WP_001335841.1;transl_table=11
NZ_JJLS01000302.1	RefSeq	gene	17919	18707	.	-	.	ID=gene-AC56_RS00530;Name=yjhI;gbkey=Gene;gene=yjhI;gene_biotype=protein_coding;locus_tag=AC56_RS00530;old_locus_tag=AC56_4826
NZ_JJLS01000302.1	Protein Homology	CDS	17919	18707	.	-	0	ID=cds-WP_000251798.1;Parent=gene-AC56_RS00530;Dbxref=GenBank:WP_000251798.1;Name=WP_000251798.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=yjhI;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418719.1;locus_tag=AC56_RS00530;product=IclR family transcriptional regulator;protein_id=WP_000251798.1;transl_table=11
NZ_JJLS01000302.1	RefSeq	gene	19010	19792	.	-	.	ID=gene-AC56_RS00525;Name=sgcR;gbkey=Gene;gene=sgcR;gene_biotype=protein_coding;locus_tag=AC56_RS00525;old_locus_tag=AC56_4828
NZ_JJLS01000302.1	Protein Homology	CDS	19010	19792	.	-	0	ID=cds-WP_000082780.1;Parent=gene-AC56_RS00525;Dbxref=GenBank:WP_000082780.1;Name=WP_000082780.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=sgcR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418720.1;locus_tag=AC56_RS00525;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000082780.1;transl_table=11
NZ_JJLS01000302.1	RefSeq	gene	19809	20441	.	-	.	ID=gene-AC56_RS00520;Name=sgcE;gbkey=Gene;gene=sgcE;gene_biotype=protein_coding;locus_tag=AC56_RS00520;old_locus_tag=AC56_4829
NZ_JJLS01000302.1	Protein Homology	CDS	19809	20441	.	-	0	ID=cds-WP_000600622.1;Parent=gene-AC56_RS00520;Dbxref=GenBank:WP_000600622.1;Name=WP_000600622.1;gbkey=CDS;gene=sgcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418721.1;locus_tag=AC56_RS00520;product=ribulose-phosphate 3 epimerase family protein;protein_id=WP_000600622.1;transl_table=11
NZ_JJLS01000302.1	RefSeq	gene	20453	20884	.	-	.	ID=gene-AC56_RS00515;Name=sgcA;gbkey=Gene;gene=sgcA;gene_biotype=protein_coding;locus_tag=AC56_RS00515;old_locus_tag=AC56_4830
NZ_JJLS01000302.1	Protein Homology	CDS	20453	20884	.	-	0	ID=cds-WP_000606406.1;Parent=gene-AC56_RS00515;Dbxref=GenBank:WP_000606406.1;Name=WP_000606406.1;gbkey=CDS;gene=sgcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418722.1;locus_tag=AC56_RS00515;product=SgcA family PTS sugar transporter subunit IIA;protein_id=WP_000606406.1;transl_table=11
NZ_JJLS01000302.1	RefSeq	gene	21015	21821	.	-	.	ID=gene-AC56_RS00510;Name=sgcQ;gbkey=Gene;gene=sgcQ;gene_biotype=protein_coding;locus_tag=AC56_RS00510;old_locus_tag=AC56_4831
NZ_JJLS01000302.1	Protein Homology	CDS	21015	21821	.	-	0	ID=cds-WP_000118626.1;Parent=gene-AC56_RS00510;Dbxref=GenBank:WP_000118626.1;Name=WP_000118626.1;gbkey=CDS;gene=sgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418723.1;locus_tag=AC56_RS00510;product=BtpA family protein SgcQ;protein_id=WP_000118626.1;transl_table=11
NZ_JJLS01000302.1	RefSeq	gene	21834	23147	.	-	.	ID=gene-AC56_RS00505;Name=sgcC;gbkey=Gene;gene=sgcC;gene_biotype=protein_coding;locus_tag=AC56_RS00505;old_locus_tag=AC56_4832
NZ_JJLS01000302.1	Protein Homology	CDS	21834	23147	.	-	0	ID=cds-WP_032171615.1;Parent=gene-AC56_RS00505;Dbxref=GenBank:WP_032171615.1;Name=WP_032171615.1;gbkey=CDS;gene=sgcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418724.1;locus_tag=AC56_RS00505;product=PTS sugar transporter subunit IIC SgcC;protein_id=WP_032171615.1;transl_table=11
NZ_JJLS01000302.1	RefSeq	gene	23159	23437	.	-	.	ID=gene-AC56_RS00500;Name=sgcB;gbkey=Gene;gene=sgcB;gene_biotype=protein_coding;locus_tag=AC56_RS00500;old_locus_tag=AC56_4833
NZ_JJLS01000302.1	Protein Homology	CDS	23159	23437	.	-	0	ID=cds-WP_000722973.1;Parent=gene-AC56_RS00500;Dbxref=GenBank:WP_000722973.1;Name=WP_000722973.1;gbkey=CDS;gene=sgcB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588476.1;locus_tag=AC56_RS00500;product=PTS sugar transporter subunit IIB SgcB;protein_id=WP_000722973.1;transl_table=11
NZ_JJLS01000302.1	RefSeq	gene	23434	24555	.	-	.	ID=gene-AC56_RS00495;Name=sgcX;gbkey=Gene;gene=sgcX;gene_biotype=protein_coding;locus_tag=AC56_RS00495;old_locus_tag=AC56_4834
NZ_JJLS01000302.1	Protein Homology	CDS	23434	24555	.	-	0	ID=cds-WP_000010829.1;Parent=gene-AC56_RS00495;Dbxref=GenBank:WP_000010829.1;Name=WP_000010829.1;gbkey=CDS;gene=sgcX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418725.4;locus_tag=AC56_RS00495;product=M42 family metallopeptidase;protein_id=WP_000010829.1;transl_table=11
NZ_JJLS01000302.1	RefSeq	pseudogene	24800	24916	.	-	.	ID=gene-AC56_RS33040;Name=AC56_RS33040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33040;partial=true;pseudo=true;start_range=.,24800
NZ_JJLS01000302.1	Protein Homology	CDS	24800	24916	.	-	0	ID=cds-AC56_RS33040;Parent=gene-AC56_RS33040;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227376.1;locus_tag=AC56_RS33040;partial=true;product=VOC family protein;pseudo=true;start_range=.,24800;transl_table=11
NZ_JJLS01000302.1	RefSeq	pseudogene	24954	25172	.	-	.	ID=gene-AC56_RS31715;Name=AC56_RS31715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS31715;pseudo=true
NZ_JJLS01000302.1	Protein Homology	CDS	24954	25172	.	-	0	ID=cds-AC56_RS31715;Parent=gene-AC56_RS31715;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001348444.1;locus_tag=AC56_RS31715;product=hypothetical protein;pseudo=true;transl_table=11
NZ_JJLS01000302.1	RefSeq	gene	25341	26087	.	-	.	ID=gene-AC56_RS00490;Name=yjhP;gbkey=Gene;gene=yjhP;gene_biotype=protein_coding;locus_tag=AC56_RS00490;old_locus_tag=AC56_4835
NZ_JJLS01000302.1	Protein Homology	CDS	25341	26087	.	-	0	ID=cds-WP_000354251.1;Parent=gene-AC56_RS00490;Dbxref=GenBank:WP_000354251.1;Name=WP_000354251.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;gene=yjhP;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418726.1;locus_tag=AC56_RS00490;product=SAM-dependent methyltransferase;protein_id=WP_000354251.1;transl_table=11
NZ_JJLS01000302.1	RefSeq	gene	26143	26688	.	-	.	ID=gene-AC56_RS00485;Name=yjhQ;gbkey=Gene;gene=yjhQ;gene_biotype=protein_coding;locus_tag=AC56_RS00485;old_locus_tag=AC56_4836
NZ_JJLS01000302.1	Protein Homology	CDS	26143	26688	.	-	0	ID=cds-WP_001309181.1;Parent=gene-AC56_RS00485;Dbxref=GenBank:WP_001309181.1;Name=WP_001309181.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;gene=yjhQ;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418727.1;locus_tag=AC56_RS00485;product=GNAT family N-acetyltransferase;protein_id=WP_001309181.1;transl_table=11
NZ_JJLS01000302.1	RefSeq	gene	26700	26957	.	-	.	ID=gene-AC56_RS00480;Name=topAI;gbkey=Gene;gene=topAI;gene_biotype=protein_coding;locus_tag=AC56_RS00480;old_locus_tag=AC56_4837
NZ_JJLS01000302.1	Protein Homology	CDS	26700	26957	.	-	0	ID=cds-WP_001054376.1;Parent=gene-AC56_RS00480;Dbxref=GenBank:WP_001054376.1;Name=WP_001054376.1;gbkey=CDS;gene=topAI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588477.1;locus_tag=AC56_RS00480;product=YjhX family toxin;protein_id=WP_001054376.1;transl_table=11
NZ_JJLS01000302.1	RefSeq	gene	27448	27579	.	-	.	ID=gene-AC56_RS33480;Name=AC56_RS33480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33480;old_locus_tag=AC56_4838
NZ_JJLS01000302.1	GeneMarkS-2+	CDS	27448	27579	.	-	0	ID=cds-WP_001309182.1;Parent=gene-AC56_RS33480;Dbxref=GenBank:WP_001309182.1;Name=WP_001309182.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC56_RS33480;product=hypothetical protein;protein_id=WP_001309182.1;transl_table=11
NZ_JJLS01000302.1	RefSeq	pseudogene	27695	28935	.	+	.	ID=gene-AC56_RS0127545;Name=yjhR;gbkey=Gene;gene=yjhR;gene_biotype=pseudogene;locus_tag=AC56_RS0127545;partial=true;pseudo=true;start_range=.,27695
NZ_JJLS01000302.1	Protein Homology	CDS	27695	28935	.	+	0	ID=cds-AC56_RS0127545;Parent=gene-AC56_RS0127545;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=yjhR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_176259710.1;locus_tag=AC56_RS0127545;partial=true;product=helicase YjhR;pseudo=true;start_range=.,27695;transl_table=11
NZ_JJLS01000302.1	RefSeq	pseudogene	29203	29408	.	-	.	ID=gene-AC56_RS33485;Name=AC56_RS33485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33485;partial=true;pseudo=true;start_range=.,29203
NZ_JJLS01000302.1	Protein Homology	CDS	29203	29408	.	-	0	ID=cds-AC56_RS33485;Parent=gene-AC56_RS33485;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000168579.1;locus_tag=AC56_RS33485;partial=true;product=phosphorothioated DNA-binding restriction endonuclease;pseudo=true;start_range=.,29203;transl_table=11
NZ_JJLS01000302.1	RefSeq	gene	29501	29599	.	+	.	ID=gene-AC56_RS33985;Name=AC56_RS33985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33985
NZ_JJLS01000302.1	Protein Homology	CDS	29501	29599	.	+	0	ID=cds-WP_211180523.1;Parent=gene-AC56_RS33985;Dbxref=GenBank:WP_211180523.1;Name=WP_211180523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051216.1;locus_tag=AC56_RS33985;product=protein YthB;protein_id=WP_211180523.1;transl_table=11
NZ_JJLS01000302.1	RefSeq	pseudogene	29884	30498	.	-	.	ID=gene-AC56_RS33990;Name=AC56_RS33990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33990;partial=true;pseudo=true;start_range=.,29884
NZ_JJLS01000302.1	Protein Homology	CDS	29884	30498	.	-	0	ID=cds-AC56_RS33990;Parent=gene-AC56_RS33990;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015585.6;locus_tag=AC56_RS33990;partial=true;product=sialate O-acetylesterase;pseudo=true;start_range=.,29884;transl_table=11
NZ_JJLS01000302.1	RefSeq	gene	30563	31669	.	-	.	ID=gene-AC56_RS00460;Name=nanM;gbkey=Gene;gene=nanM;gene_biotype=protein_coding;locus_tag=AC56_RS00460;old_locus_tag=AC56_4842
NZ_JJLS01000302.1	Protein Homology	CDS	30563	31669	.	-	0	ID=cds-WP_001309184.1;Parent=gene-AC56_RS00460;Dbxref=GenBank:WP_001309184.1;Name=WP_001309184.1;gbkey=CDS;gene=nanM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418730.4;locus_tag=AC56_RS00460;product=N-acetylneuraminate epimerase;protein_id=WP_001309184.1;transl_table=11
NZ_JJLS01000302.1	RefSeq	gene	31689	32405	.	-	.	ID=gene-AC56_RS00455;Name=nanC;gbkey=Gene;gene=nanC;gene_biotype=protein_coding;locus_tag=AC56_RS00455;old_locus_tag=AC56_4843
NZ_JJLS01000302.1	Protein Homology	CDS	31689	32405	.	-	0	ID=cds-WP_001295734.1;Parent=gene-AC56_RS00455;Dbxref=GenBank:WP_001295734.1;Name=WP_001295734.1;gbkey=CDS;gene=nanC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313297.2;locus_tag=AC56_RS00455;product=N-acetylneuraminic acid outer membrane channel NanC;protein_id=WP_001295734.1;transl_table=11
NZ_JJLS01000302.1	RefSeq	gene	33862	34464	.	+	.	ID=gene-AC56_RS00450;Name=fimB;gbkey=Gene;gene=fimB;gene_biotype=protein_coding;locus_tag=AC56_RS00450;old_locus_tag=AC56_4845
NZ_JJLS01000302.1	Protein Homology	CDS	33862	34464	.	+	0	ID=cds-WP_000790583.1;Parent=gene-AC56_RS00450;Dbxref=GenBank:WP_000790583.1;Name=WP_000790583.1;gbkey=CDS;gene=fimB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313298.1;locus_tag=AC56_RS00450;product=type 1 fimbria switch DNA invertase FimB;protein_id=WP_000790583.1;transl_table=11
NZ_JJLS01000302.1	RefSeq	gene	34942	35538	.	+	.	ID=gene-AC56_RS00445;Name=fimE;gbkey=Gene;gene=fimE;gene_biotype=protein_coding;locus_tag=AC56_RS00445;old_locus_tag=AC56_4846
NZ_JJLS01000302.1	Protein Homology	CDS	34942	35538	.	+	0	ID=cds-WP_000044711.1;Parent=gene-AC56_RS00445;Dbxref=GenBank:WP_000044711.1;Name=WP_000044711.1;Note=upgraded from regulatory protein to switch DNA invertase;gbkey=CDS;gene=fimE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418733.1;locus_tag=AC56_RS00445;product=type 1 fimbria switch DNA invertase FimE;protein_id=WP_000044711.1;transl_table=11
NZ_JJLS01000302.1	RefSeq	gene	36021	36533	.	+	.	ID=gene-AC56_RS00440;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=AC56_RS00440;old_locus_tag=AC56_4847
NZ_JJLS01000302.1	Protein Homology	CDS	36021	36533	.	+	0	ID=cds-WP_001554667.1;Parent=gene-AC56_RS00440;Dbxref=GenBank:WP_001554667.1;Name=WP_001554667.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=fimA;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418734.1;locus_tag=AC56_RS00440;product=type 1 fimbrial major subunit FimA;protein_id=WP_001554667.1;transl_table=11
NZ_JJLS01000302.1	RefSeq	gene	36577	37689	.	+	.	ID=gene-AC56_RS00435;Name=AC56_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS00435;old_locus_tag=AC56_4848
NZ_JJLS01000302.1	Protein Homology	CDS	36577	37689	.	+	0	ID=cds-WP_001300563.1;Parent=gene-AC56_RS00435;Dbxref=GenBank:WP_001300563.1;Name=WP_001300563.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS00435;product=IS4-like element IS421 family transposase;protein_id=WP_001300563.1;transl_table=11
##sequence-region NZ_JJLS01000303.1 1 13345
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000303.1	RefSeq	region	1	13345	.	+	.	ID=NZ_JJLS01000303.1:1..13345;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000303.1	RefSeq	gene	1	961	.	+	.	ID=gene-AC56_RS00430;Name=AC56_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS00430;old_locus_tag=AC56_4850;partial=true;start_range=.,1
NZ_JJLS01000303.1	Protein Homology	CDS	1	961	.	+	1	ID=cds-WP_032282478.1-17;Parent=gene-AC56_RS00430;Dbxref=GenBank:WP_032282478.1;Name=WP_032282478.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC56_RS00430;partial=true;product=IS4-like element IS421 family transposase;protein_id=WP_032282478.1;start_range=.,1;transl_table=11
NZ_JJLS01000303.1	RefSeq	gene	1255	1794	.	+	.	ID=gene-AC56_RS00425;Name=fimI;gbkey=Gene;gene=fimI;gene_biotype=protein_coding;locus_tag=AC56_RS00425;old_locus_tag=AC56_4851
NZ_JJLS01000303.1	Protein Homology	CDS	1255	1794	.	+	0	ID=cds-WP_000824114.1;Parent=gene-AC56_RS00425;Dbxref=GenBank:WP_000824114.1;Name=WP_000824114.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=fimI;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418735.2;locus_tag=AC56_RS00425;product=fimbrial protein;protein_id=WP_000824114.1;transl_table=11
NZ_JJLS01000303.1	RefSeq	gene	1831	2556	.	+	.	ID=gene-AC56_RS00420;Name=fimC;gbkey=Gene;gene=fimC;gene_biotype=protein_coding;locus_tag=AC56_RS00420;old_locus_tag=AC56_4852
NZ_JJLS01000303.1	Protein Homology	CDS	1831	2556	.	+	0	ID=cds-WP_000066560.1;Parent=gene-AC56_RS00420;Dbxref=GenBank:WP_000066560.1;Name=WP_000066560.1;gbkey=CDS;gene=fimC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418736.3;locus_tag=AC56_RS00420;product=type 1 fimbria chaperone FimC;protein_id=WP_000066560.1;transl_table=11
NZ_JJLS01000303.1	RefSeq	gene	2623	5259	.	+	.	ID=gene-AC56_RS00415;Name=fimD;gbkey=Gene;gene=fimD;gene_biotype=protein_coding;locus_tag=AC56_RS00415;old_locus_tag=AC56_4853
NZ_JJLS01000303.1	Protein Homology	CDS	2623	5259	.	+	0	ID=cds-WP_000121002.1;Parent=gene-AC56_RS00415;Dbxref=GenBank:WP_000121002.1;Name=WP_000121002.1;gbkey=CDS;gene=fimD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418737.1;locus_tag=AC56_RS00415;product=fimbrial usher FimD;protein_id=WP_000121002.1;transl_table=11
NZ_JJLS01000303.1	RefSeq	gene	5269	5799	.	+	.	ID=gene-AC56_RS00410;Name=fimF;gbkey=Gene;gene=fimF;gene_biotype=protein_coding;locus_tag=AC56_RS00410;old_locus_tag=AC56_4854
NZ_JJLS01000303.1	Protein Homology	CDS	5269	5799	.	+	0	ID=cds-WP_001244827.1;Parent=gene-AC56_RS00410;Dbxref=GenBank:WP_001244827.1;Name=WP_001244827.1;gbkey=CDS;gene=fimF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418738.1;locus_tag=AC56_RS00410;product=type 1 fimbria minor subunit FimF;protein_id=WP_001244827.1;transl_table=11
NZ_JJLS01000303.1	RefSeq	gene	5872	6315	.	+	.	ID=gene-AC56_RS00405;Name=AC56_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS00405;old_locus_tag=AC56_4855
NZ_JJLS01000303.1	Protein Homology	CDS	5872	6315	.	+	0	ID=cds-WP_077897989.1;Parent=gene-AC56_RS00405;Dbxref=GenBank:WP_077897989.1;Name=WP_077897989.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418739.1;locus_tag=AC56_RS00405;product=fimbrial protein;protein_id=WP_077897989.1;transl_table=11
NZ_JJLS01000303.1	RefSeq	gene	6335	7237	.	+	.	ID=gene-AC56_RS00400;Name=fimH;gbkey=Gene;gene=fimH;gene_biotype=protein_coding;locus_tag=AC56_RS00400;old_locus_tag=AC56_4856
NZ_JJLS01000303.1	Protein Homology	CDS	6335	7237	.	+	0	ID=cds-WP_000832247.1;Parent=gene-AC56_RS00400;Dbxref=GenBank:WP_000832247.1;Name=WP_000832247.1;gbkey=CDS;gene=fimH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418740.1;locus_tag=AC56_RS00400;product=type 1 fimbria D-mannose specific adhesin FimH;protein_id=WP_000832247.1;transl_table=11
NZ_JJLS01000303.1	RefSeq	gene	7410	8753	.	-	.	ID=gene-AC56_RS00395;Name=gntP;gbkey=Gene;gene=gntP;gene_biotype=protein_coding;locus_tag=AC56_RS00395;old_locus_tag=AC56_4857
NZ_JJLS01000303.1	Protein Homology	CDS	7410	8753	.	-	0	ID=cds-WP_000558251.1;Parent=gene-AC56_RS00395;Dbxref=GenBank:WP_000558251.1;Name=WP_000558251.1;gbkey=CDS;gene=gntP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313307.1;locus_tag=AC56_RS00395;product=gluconate permease GntP;protein_id=WP_000558251.1;transl_table=11
NZ_JJLS01000303.1	RefSeq	gene	9093	10277	.	+	.	ID=gene-AC56_RS00390;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=AC56_RS00390;old_locus_tag=AC56_4859
NZ_JJLS01000303.1	Protein Homology	CDS	9093	10277	.	+	0	ID=cds-WP_000438582.1;Parent=gene-AC56_RS00390;Dbxref=GenBank:WP_000438582.1;Name=WP_000438582.1;Ontology_term=GO:0006064,GO:0008927;gbkey=CDS;gene=uxuA;go_function=mannonate dehydratase activity|0008927||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709912.2;locus_tag=AC56_RS00390;product=mannonate dehydratase;protein_id=WP_000438582.1;transl_table=11
NZ_JJLS01000303.1	RefSeq	gene	10358	11818	.	+	.	ID=gene-AC56_RS00385;Name=uxuB;gbkey=Gene;gene=uxuB;gene_biotype=protein_coding;locus_tag=AC56_RS00385;old_locus_tag=AC56_4860
NZ_JJLS01000303.1	Protein Homology	CDS	10358	11818	.	+	0	ID=cds-WP_000208194.1;Parent=gene-AC56_RS00385;Dbxref=GenBank:WP_000208194.1;Name=WP_000208194.1;gbkey=CDS;gene=uxuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313309.1;locus_tag=AC56_RS00385;product=fructuronate reductase;protein_id=WP_000208194.1;transl_table=11
NZ_JJLS01000303.1	RefSeq	gene	12033	12806	.	+	.	ID=gene-AC56_RS00375;Name=uxuR;gbkey=Gene;gene=uxuR;gene_biotype=protein_coding;locus_tag=AC56_RS00375;old_locus_tag=AC56_4862
NZ_JJLS01000303.1	Protein Homology	CDS	12033	12806	.	+	0	ID=cds-WP_000833691.1;Parent=gene-AC56_RS00375;Dbxref=GenBank:WP_000833691.1;Name=WP_000833691.1;gbkey=CDS;gene=uxuR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000833692.1;locus_tag=AC56_RS00375;product=Uxu operon transcriptional regulator;protein_id=WP_000833691.1;transl_table=11
NZ_JJLS01000303.1	RefSeq	gene	12982	13345	.	-	.	ID=gene-AC56_RS00370;Name=AC56_RS00370;end_range=13345,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS00370;old_locus_tag=AC56_4863;partial=true
NZ_JJLS01000303.1	Protein Homology	CDS	12982	13345	.	-	1	ID=cds-WP_032282945.1;Parent=gene-AC56_RS00370;Dbxref=GenBank:WP_032282945.1;Name=WP_032282945.1;end_range=13345,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC56_RS00370;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032282945.1;transl_table=11
##sequence-region NZ_JJLS01000304.1 1 14977
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000304.1	RefSeq	region	1	14977	.	+	.	ID=NZ_JJLS01000304.1:1..14977;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000304.1	RefSeq	pseudogene	1	510	.	+	.	ID=gene-AC56_RS00365;Name=AC56_RS00365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS00365;old_locus_tag=AC56_4864;partial=true;pseudo=true;start_range=.,1
NZ_JJLS01000304.1	Protein Homology	CDS	1	510	.	+	1	ID=cds-AC56_RS00365;Parent=gene-AC56_RS00365;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS00365;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JJLS01000304.1	RefSeq	gene	593	1423	.	-	.	ID=gene-AC56_RS00360;Name=yjiC;gbkey=Gene;gene=yjiC;gene_biotype=protein_coding;locus_tag=AC56_RS00360;old_locus_tag=AC56_4865
NZ_JJLS01000304.1	Protein Homology	CDS	593	1423	.	-	0	ID=cds-WP_000062589.1;Parent=gene-AC56_RS00360;Dbxref=GenBank:WP_000062589.1;Name=WP_000062589.1;gbkey=CDS;gene=yjiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313311.3;locus_tag=AC56_RS00360;product=DUF2686 family protein;protein_id=WP_000062589.1;transl_table=11
NZ_JJLS01000304.1	RefSeq	gene	1710	1778	.	+	.	ID=gene-AC56_RS33995;Name=AC56_RS33995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS33995
NZ_JJLS01000304.1	Protein Homology	CDS	1710	1778	.	+	0	ID=cds-WP_418267939.1;Parent=gene-AC56_RS33995;Dbxref=GenBank:WP_418267939.1;Name=WP_418267939.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048182.1;locus_tag=AC56_RS33995;product=hypothetical protein;protein_id=WP_418267939.1;transl_table=11
NZ_JJLS01000304.1	RefSeq	gene	1757	1900	.	+	.	ID=gene-AC56_RS33625;Name=ytiD;gbkey=Gene;gene=ytiD;gene_biotype=protein_coding;locus_tag=AC56_RS33625;old_locus_tag=AC56_4867
NZ_JJLS01000304.1	Protein Homology	CDS	1757	1900	.	+	0	ID=cds-WP_001297228.1;Parent=gene-AC56_RS33625;Dbxref=GenBank:WP_001297228.1;Name=WP_001297228.1;gbkey=CDS;gene=ytiD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518831.1;locus_tag=AC56_RS33625;product=protein YtiD;protein_id=WP_001297228.1;transl_table=11
NZ_JJLS01000304.1	RefSeq	gene	2016	2099	.	+	.	ID=gene-AC56_RS32880;Name=idlP;gbkey=Gene;gene=idlP;gene_biotype=protein_coding;locus_tag=AC56_RS32880
NZ_JJLS01000304.1	Protein Homology	CDS	2016	2099	.	+	0	ID=cds-WP_120795393.1;Parent=gene-AC56_RS32880;Dbxref=GenBank:WP_120795393.1;Name=WP_120795393.1;gbkey=CDS;gene=idlP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518832.1;locus_tag=AC56_RS32880;product=iraD leader peptide IdlP;protein_id=WP_120795393.1;transl_table=11
NZ_JJLS01000304.1	RefSeq	gene	2096	2488	.	+	.	ID=gene-AC56_RS00350;Name=iraD;gbkey=Gene;gene=iraD;gene_biotype=protein_coding;locus_tag=AC56_RS00350;old_locus_tag=AC56_4869
NZ_JJLS01000304.1	Protein Homology	CDS	2096	2488	.	+	0	ID=cds-WP_001297236.1;Parent=gene-AC56_RS00350;Dbxref=GenBank:WP_001297236.1;Name=WP_001297236.1;gbkey=CDS;gene=iraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418746.4;locus_tag=AC56_RS00350;product=anti-adapter protein IraD;protein_id=WP_001297236.1;transl_table=11
NZ_JJLS01000304.1	RefSeq	gene	2481	3392	.	-	.	ID=gene-AC56_RS00345;Name=hypT;gbkey=Gene;gene=hypT;gene_biotype=protein_coding;gene_synonym=qseD;locus_tag=AC56_RS00345;old_locus_tag=AC56_4870
NZ_JJLS01000304.1	Protein Homology	CDS	2481	3392	.	-	0	ID=cds-WP_032279338.1;Parent=gene-AC56_RS00345;Dbxref=GenBank:WP_032279338.1;Name=WP_032279338.1;gbkey=CDS;gene=hypT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418747.1;locus_tag=AC56_RS00345;product=hypochlorite stress DNA-binding transcriptional regulator HypT;protein_id=WP_032279338.1;transl_table=11
NZ_JJLS01000304.1	RefSeq	gene	3457	4629	.	-	.	ID=gene-AC56_RS00340;Name=iadA;gbkey=Gene;gene=iadA;gene_biotype=protein_coding;locus_tag=AC56_RS00340;old_locus_tag=AC56_4871
NZ_JJLS01000304.1	Protein Homology	CDS	3457	4629	.	-	0	ID=cds-WP_000568416.1;Parent=gene-AC56_RS00340;Dbxref=GenBank:WP_000568416.1;Name=WP_000568416.1;Ontology_term=GO:0008798;gbkey=CDS;gene=iadA;go_function=beta-aspartyl-peptidase activity|0008798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313313.1;locus_tag=AC56_RS00340;product=beta-aspartyl-peptidase;protein_id=WP_000568416.1;transl_table=11
NZ_JJLS01000304.1	RefSeq	gene	4642	5103	.	-	.	ID=gene-AC56_RS00335;Name=yjiG;gbkey=Gene;gene=yjiG;gene_biotype=protein_coding;locus_tag=AC56_RS00335;old_locus_tag=AC56_4872
NZ_JJLS01000304.1	Protein Homology	CDS	4642	5103	.	-	0	ID=cds-WP_000211971.1;Parent=gene-AC56_RS00335;Dbxref=GenBank:WP_000211971.1;Name=WP_000211971.1;gbkey=CDS;gene=yjiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313314.1;locus_tag=AC56_RS00335;product=YjiG family protein;protein_id=WP_000211971.1;transl_table=11
NZ_JJLS01000304.1	RefSeq	gene	5100	5783	.	-	.	ID=gene-AC56_RS00330;Name=yjiH;gbkey=Gene;gene=yjiH;gene_biotype=protein_coding;locus_tag=AC56_RS00330;old_locus_tag=AC56_4873
NZ_JJLS01000304.1	Protein Homology	CDS	5100	5783	.	-	0	ID=cds-WP_001295597.1;Parent=gene-AC56_RS00330;Dbxref=GenBank:WP_001295597.1;Name=WP_001295597.1;gbkey=CDS;gene=yjiH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418750.2;locus_tag=AC56_RS00330;product=nucleoside recognition domain-containing protein;protein_id=WP_001295597.1;transl_table=11
NZ_JJLS01000304.1	RefSeq	gene	6033	6587	.	+	.	ID=gene-AC56_RS00325;Name=kptA;gbkey=Gene;gene=kptA;gene_biotype=protein_coding;locus_tag=AC56_RS00325;old_locus_tag=AC56_4874
NZ_JJLS01000304.1	Protein Homology	CDS	6033	6587	.	+	0	ID=cds-WP_001151855.1;Parent=gene-AC56_RS00325;Dbxref=GenBank:WP_001151855.1;Name=WP_001151855.1;gbkey=CDS;gene=kptA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151849.1;locus_tag=AC56_RS00325;product=RNA 2'-phosphotransferase;protein_id=WP_001151855.1;transl_table=11
NZ_JJLS01000304.1	RefSeq	gene	6600	7778	.	-	.	ID=gene-AC56_RS00320;Name=yjiJ;gbkey=Gene;gene=yjiJ;gene_biotype=protein_coding;locus_tag=AC56_RS00320;old_locus_tag=AC56_4875
NZ_JJLS01000304.1	Protein Homology	CDS	6600	7778	.	-	0	ID=cds-WP_001141196.1;Parent=gene-AC56_RS00320;Dbxref=GenBank:WP_001141196.1;Name=WP_001141196.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjiJ;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418752.1;locus_tag=AC56_RS00320;product=MFS transporter;protein_id=WP_001141196.1;transl_table=11
NZ_JJLS01000304.1	RefSeq	gene	7846	8706	.	-	.	ID=gene-AC56_RS00315;Name=yjiK;gbkey=Gene;gene=yjiK;gene_biotype=protein_coding;locus_tag=AC56_RS00315;old_locus_tag=AC56_4876
NZ_JJLS01000304.1	Protein Homology	CDS	7846	8706	.	-	0	ID=cds-WP_001298932.1;Parent=gene-AC56_RS00315;Dbxref=GenBank:WP_001298932.1;Name=WP_001298932.1;gbkey=CDS;gene=yjiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418753.3;locus_tag=AC56_RS00315;product=SdiA-regulated domain-containing protein;protein_id=WP_001298932.1;transl_table=11
NZ_JJLS01000304.1	RefSeq	gene	8771	9028	.	-	.	ID=gene-AC56_RS00310;Name=ytiA;gbkey=Gene;gene=ytiA;gene_biotype=protein_coding;locus_tag=AC56_RS00310;old_locus_tag=AC56_4877
NZ_JJLS01000304.1	Protein Homology	CDS	8771	9028	.	-	0	ID=cds-WP_000657676.1;Parent=gene-AC56_RS00310;Dbxref=GenBank:WP_000657676.1;Name=WP_000657676.1;gbkey=CDS;gene=ytiA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518833.1;locus_tag=AC56_RS00310;product=DUF3343 domain-containing protein;protein_id=WP_000657676.1;transl_table=11
NZ_JJLS01000304.1	RefSeq	gene	9025	9792	.	-	.	ID=gene-AC56_RS00305;Name=yjiL;gbkey=Gene;gene=yjiL;gene_biotype=protein_coding;locus_tag=AC56_RS00305;old_locus_tag=AC56_4878
NZ_JJLS01000304.1	Protein Homology	CDS	9025	9792	.	-	0	ID=cds-WP_000222495.1;Parent=gene-AC56_RS00305;Dbxref=GenBank:WP_000222495.1;Name=WP_000222495.1;Note=YjiL%2C as found in Escherichia coli%2C is a homolog of the activator ATPases of enzymes such as lactoyl-CoA dehydratase%2C (R)-phenyllactate dehydratase%2C and 2-hydroxyisocaproyl-CoA dehydratase. The typical substrate of those enzymes is acyl-CoA with an OH at the beta-position. YjiL is the putative activator for the cognate protein YjiM%2C a putative 2-hydroxyacyl-CoA dehydratase with unknown specificity%2C encoded by the adjacent gene.;gbkey=CDS;gene=yjiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313324.1;locus_tag=AC56_RS00305;product=putative 2-hydroxyacyl-CoA dehydratase activator YjiL;protein_id=WP_000222495.1;transl_table=11
NZ_JJLS01000304.1	RefSeq	gene	9802	10953	.	-	.	ID=gene-AC56_RS00300;Name=yjiM;gbkey=Gene;gene=yjiM;gene_biotype=protein_coding;locus_tag=AC56_RS00300;old_locus_tag=AC56_4879
NZ_JJLS01000304.1	Protein Homology	CDS	9802	10953	.	-	0	ID=cds-WP_001298064.1;Parent=gene-AC56_RS00300;Dbxref=GenBank:WP_001298064.1;Name=WP_001298064.1;gbkey=CDS;gene=yjiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418755.4;locus_tag=AC56_RS00300;product=double-cubane-cluster-containing anaerobic reductase;protein_id=WP_001298064.1;transl_table=11
NZ_JJLS01000304.1	RefSeq	gene	11069	12349	.	-	.	ID=gene-AC56_RS00295;Name=yjiN;gbkey=Gene;gene=yjiN;gene_biotype=protein_coding;locus_tag=AC56_RS00295;old_locus_tag=AC56_4880
NZ_JJLS01000304.1	Protein Homology	CDS	11069	12349	.	-	0	ID=cds-WP_001037400.1;Parent=gene-AC56_RS00295;Dbxref=GenBank:WP_001037400.1;Name=WP_001037400.1;gbkey=CDS;gene=yjiN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418756.1;locus_tag=AC56_RS00295;product=DUF445 domain-containing protein;protein_id=WP_001037400.1;transl_table=11
NZ_JJLS01000304.1	RefSeq	gene	12390	13622	.	-	.	ID=gene-AC56_RS00290;Name=mdtM;gbkey=Gene;gene=mdtM;gene_biotype=protein_coding;locus_tag=AC56_RS00290;old_locus_tag=AC56_4881
NZ_JJLS01000304.1	Protein Homology	CDS	12390	13622	.	-	0	ID=cds-WP_024186283.1;Parent=gene-AC56_RS00290;Dbxref=GenBank:WP_024186283.1;Name=WP_024186283.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtM;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001420685.1;locus_tag=AC56_RS00290;product=multidrug efflux MFS transporter MdtM;protein_id=WP_024186283.1;transl_table=11
NZ_JJLS01000304.1	RefSeq	pseudogene	13768	13863	.	-	.	ID=gene-AC56_RS30730;Name=AC56_RS30730;end_range=13863,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS30730;partial=true;pseudo=true
NZ_JJLS01000304.1	Protein Homology	CDS	13768	13863	.	-	0	ID=cds-AC56_RS30730;Parent=gene-AC56_RS30730;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016787;end_range=13863,.;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311911.3;locus_tag=AC56_RS30730;partial=true;product=dienelactone hydrolase family protein;pseudo=true;transl_table=11
NZ_JJLS01000304.1	RefSeq	pseudogene	13920	14617	.	+	.	ID=gene-AC56_RS0127580;Name=AC56_RS0127580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS0127580;pseudo=true
NZ_JJLS01000304.1	Protein Homology	CDS	13920	14617	.	+	0	ID=cds-AC56_RS0127580;Parent=gene-AC56_RS0127580;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558153.1;locus_tag=AC56_RS0127580;product=IS1 family transposase;pseudo=true;transl_table=11
NZ_JJLS01000304.1	RefSeq	pseudogene	14628	14699	.	-	.	ID=gene-AC56_RS33810;Name=AC56_RS33810;end_range=14699,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33810;partial=true;pseudo=true
NZ_JJLS01000304.1	Protein Homology	CDS	14628	14699	.	-	0	ID=cds-AC56_RS33810;Parent=gene-AC56_RS33810;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=14699,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013446.6;locus_tag=AC56_RS33810;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_JJLS01000304.1	RefSeq	pseudogene	14737	14977	.	+	.	ID=gene-AC56_RS33045;Name=AC56_RS33045;end_range=14977,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC56_RS33045;partial=true;pseudo=true
NZ_JJLS01000304.1	Protein Homology	CDS	14737	14977	.	+	0	ID=cds-AC56_RS33045;Parent=gene-AC56_RS33045;Note=frameshifted%3B internal stop%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=14977,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AC56_RS33045;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_JJLS01000305.1 1 18456
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000305.1	RefSeq	region	1	18456	.	+	.	ID=NZ_JJLS01000305.1:1..18456;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000305.1	RefSeq	gene	1	206	.	+	.	ID=gene-AC56_RS00285;Name=AC56_RS00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS00285;old_locus_tag=AC56_4885;partial=true;start_range=.,1
NZ_JJLS01000305.1	Protein Homology	CDS	1	206	.	+	2	ID=cds-WP_000001233.1;Parent=gene-AC56_RS00285;Dbxref=GenBank:WP_000001233.1;Name=WP_000001233.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC56_RS00285;partial=true;product=IS1 family transposase;protein_id=WP_000001233.1;start_range=.,1;transl_table=11
NZ_JJLS01000305.1	RefSeq	gene	405	692	.	+	.	ID=gene-AC56_RS00280;Name=AC56_RS00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS00280;old_locus_tag=AC56_4886
NZ_JJLS01000305.1	Protein Homology	CDS	405	692	.	+	0	ID=cds-WP_001297643.1;Parent=gene-AC56_RS00280;Dbxref=GenBank:WP_001297643.1;Name=WP_001297643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463387.1;locus_tag=AC56_RS00280;product=BrnT family toxin;protein_id=WP_001297643.1;transl_table=11
NZ_JJLS01000305.1	RefSeq	gene	679	981	.	+	.	ID=gene-AC56_RS00275;Name=AC56_RS00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS00275;old_locus_tag=AC56_4887
NZ_JJLS01000305.1	Protein Homology	CDS	679	981	.	+	0	ID=cds-WP_000063156.1;Parent=gene-AC56_RS00275;Dbxref=GenBank:WP_000063156.1;Name=WP_000063156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004020443.1;locus_tag=AC56_RS00275;product=BrnA antitoxin family protein;protein_id=WP_000063156.1;transl_table=11
NZ_JJLS01000305.1	RefSeq	gene	1015	1971	.	-	.	ID=gene-AC56_RS00270;Name=yjiA;gbkey=Gene;gene=yjiA;gene_biotype=protein_coding;locus_tag=AC56_RS00270;old_locus_tag=AC56_4888
NZ_JJLS01000305.1	Protein Homology	CDS	1015	1971	.	-	0	ID=cds-WP_001297640.1;Parent=gene-AC56_RS00270;Dbxref=GenBank:WP_001297640.1;Name=WP_001297640.1;gbkey=CDS;gene=yjiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313338.2;locus_tag=AC56_RS00270;product=GTPase;protein_id=WP_001297640.1;transl_table=11
NZ_JJLS01000305.1	RefSeq	gene	1982	2185	.	-	.	ID=gene-AC56_RS00265;Name=yjiX;gbkey=Gene;gene=yjiX;gene_biotype=protein_coding;locus_tag=AC56_RS00265;old_locus_tag=AC56_4889
NZ_JJLS01000305.1	Protein Homology	CDS	1982	2185	.	-	0	ID=cds-WP_000467859.1;Parent=gene-AC56_RS00265;Dbxref=GenBank:WP_000467859.1;Name=WP_000467859.1;gbkey=CDS;gene=yjiX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313339.1;locus_tag=AC56_RS00265;product=YbdD/YjiX family protein;protein_id=WP_000467859.1;transl_table=11
NZ_JJLS01000305.1	RefSeq	gene	2235	4385	.	-	.	ID=gene-AC56_RS00260;Name=btsT;gbkey=Gene;gene=btsT;gene_biotype=protein_coding;locus_tag=AC56_RS00260;old_locus_tag=AC56_4890
NZ_JJLS01000305.1	Protein Homology	CDS	2235	4385	.	-	0	ID=cds-WP_001295524.1;Parent=gene-AC56_RS00260;Dbxref=GenBank:WP_001295524.1;Name=WP_001295524.1;gbkey=CDS;gene=btsT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418774.2;locus_tag=AC56_RS00260;product=pyruvate/proton symporter BtsT;protein_id=WP_001295524.1;transl_table=11
NZ_JJLS01000305.1	RefSeq	gene	4762	6420	.	+	.	ID=gene-AC56_RS00255;Name=tsr;gbkey=Gene;gene=tsr;gene_biotype=protein_coding;locus_tag=AC56_RS00255;old_locus_tag=AC56_4891
NZ_JJLS01000305.1	Protein Homology	CDS	4762	6420	.	+	0	ID=cds-WP_032279340.1;Parent=gene-AC56_RS00255;Dbxref=GenBank:WP_032279340.1;Name=WP_032279340.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tsr;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313342.1;locus_tag=AC56_RS00255;product=methyl-accepting chemotaxis protein;protein_id=WP_032279340.1;transl_table=11
NZ_JJLS01000305.1	RefSeq	gene	6469	7830	.	-	.	ID=gene-AC56_RS00250;Name=lgoT;gbkey=Gene;gene=lgoT;gene_biotype=protein_coding;locus_tag=AC56_RS00250;old_locus_tag=AC56_4892
NZ_JJLS01000305.1	Protein Homology	CDS	6469	7830	.	-	0	ID=cds-WP_032279341.1;Parent=gene-AC56_RS00250;Dbxref=GenBank:WP_032279341.1;Name=WP_032279341.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lgoT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313343.1;locus_tag=AC56_RS00250;product=MFS transporter;protein_id=WP_032279341.1;transl_table=11
NZ_JJLS01000305.1	RefSeq	gene	8047	8961	.	-	.	ID=gene-AC56_RS00245;Name=lgoR;gbkey=Gene;gene=lgoR;gene_biotype=protein_coding;locus_tag=AC56_RS00245;old_locus_tag=AC56_4893
NZ_JJLS01000305.1	Protein Homology	CDS	8047	8961	.	-	0	ID=cds-WP_000091573.1;Parent=gene-AC56_RS00245;Dbxref=GenBank:WP_000091573.1;Name=WP_000091573.1;gbkey=CDS;gene=lgoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313344.2;locus_tag=AC56_RS00245;product=GntR family transcriptional regulator;protein_id=WP_000091573.1;transl_table=11
NZ_JJLS01000305.1	RefSeq	gene	9100	10122	.	+	.	ID=gene-AC56_RS00240;Name=lgoD;gbkey=Gene;gene=lgoD;gene_biotype=protein_coding;locus_tag=AC56_RS00240;old_locus_tag=AC56_4894
NZ_JJLS01000305.1	Protein Homology	CDS	9100	10122	.	+	0	ID=cds-WP_000106021.1;Parent=gene-AC56_RS00240;Dbxref=GenBank:WP_000106021.1;Name=WP_000106021.1;gbkey=CDS;gene=lgoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418778.4;locus_tag=AC56_RS00240;product=L-galactonate oxidoreductase;protein_id=WP_000106021.1;transl_table=11
NZ_JJLS01000305.1	RefSeq	gene	10262	12553	.	-	.	ID=gene-AC56_RS00235;Name=opgB;gbkey=Gene;gene=opgB;gene_biotype=protein_coding;locus_tag=AC56_RS00235;old_locus_tag=AC56_4895
NZ_JJLS01000305.1	Protein Homology	CDS	10262	12553	.	-	0	ID=cds-WP_001292676.1;Parent=gene-AC56_RS00235;Dbxref=GenBank:WP_001292676.1;Name=WP_001292676.1;Ontology_term=GO:0008484;gbkey=CDS;gene=opgB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313346.2;locus_tag=AC56_RS00235;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;protein_id=WP_001292676.1;transl_table=11
NZ_JJLS01000305.1	RefSeq	gene	12807	13301	.	-	.	ID=gene-AC56_RS00230;Name=yjjA;gbkey=Gene;gene=yjjA;gene_biotype=protein_coding;locus_tag=AC56_RS00230;old_locus_tag=AC56_4896
NZ_JJLS01000305.1	Protein Homology	CDS	12807	13301	.	-	0	ID=cds-WP_001308243.1;Parent=gene-AC56_RS00230;Dbxref=GenBank:WP_001308243.1;Name=WP_001308243.1;gbkey=CDS;gene=yjjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418780.2;locus_tag=AC56_RS00230;product=DUF2501 domain-containing protein YjjA;protein_id=WP_001308243.1;transl_table=11
NZ_JJLS01000305.1	RefSeq	gene	13350	14087	.	-	.	ID=gene-AC56_RS00225;Name=dnaC;gbkey=Gene;gene=dnaC;gene_biotype=protein_coding;locus_tag=AC56_RS00225;old_locus_tag=AC56_4897
NZ_JJLS01000305.1	Protein Homology	CDS	13350	14087	.	-	0	ID=cds-WP_000799911.1;Parent=gene-AC56_RS00225;Dbxref=GenBank:WP_000799911.1;Name=WP_000799911.1;gbkey=CDS;gene=dnaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313348.1;locus_tag=AC56_RS00225;product=DNA replication protein DnaC;protein_id=WP_000799911.1;transl_table=11
NZ_JJLS01000305.1	RefSeq	gene	14090	14629	.	-	.	ID=gene-AC56_RS00220;Name=dnaT;gbkey=Gene;gene=dnaT;gene_biotype=protein_coding;locus_tag=AC56_RS00220;old_locus_tag=AC56_4898
NZ_JJLS01000305.1	Protein Homology	CDS	14090	14629	.	-	0	ID=cds-WP_000098830.1;Parent=gene-AC56_RS00220;Dbxref=GenBank:WP_000098830.1;Name=WP_000098830.1;gbkey=CDS;gene=dnaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418782.1;locus_tag=AC56_RS00220;product=primosomal protein DnaT;protein_id=WP_000098830.1;transl_table=11
NZ_JJLS01000305.1	RefSeq	gene	14737	15210	.	-	.	ID=gene-AC56_RS00215;Name=yjjB;gbkey=Gene;gene=yjjB;gene_biotype=protein_coding;locus_tag=AC56_RS00215;old_locus_tag=AC56_4899
NZ_JJLS01000305.1	Protein Homology	CDS	14737	15210	.	-	0	ID=cds-WP_000538176.1;Parent=gene-AC56_RS00215;Dbxref=GenBank:WP_000538176.1;Name=WP_000538176.1;gbkey=CDS;gene=yjjB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418783.2;locus_tag=AC56_RS00215;product=threonine/serine exporter;protein_id=WP_000538176.1;transl_table=11
NZ_JJLS01000305.1	RefSeq	gene	15201	15971	.	-	.	ID=gene-AC56_RS00210;Name=yjjP;gbkey=Gene;gene=yjjP;gene_biotype=protein_coding;locus_tag=AC56_RS00210;old_locus_tag=AC56_4900
NZ_JJLS01000305.1	Protein Homology	CDS	15201	15971	.	-	0	ID=cds-WP_001361172.1;Parent=gene-AC56_RS00210;Dbxref=GenBank:WP_001361172.1;Name=WP_001361172.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;gene=yjjP;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418784.4;locus_tag=AC56_RS00210;product=threonine/serine ThrE exporter family protein;protein_id=WP_001361172.1;transl_table=11
NZ_JJLS01000305.1	RefSeq	gene	16590	17315	.	+	.	ID=gene-AC56_RS00205;Name=yjjQ;gbkey=Gene;gene=yjjQ;gene_biotype=protein_coding;locus_tag=AC56_RS00205;old_locus_tag=AC56_4902
NZ_JJLS01000305.1	Protein Homology	CDS	16590	17315	.	+	0	ID=cds-WP_000936614.1;Parent=gene-AC56_RS00205;Dbxref=GenBank:WP_000936614.1;Name=WP_000936614.1;gbkey=CDS;gene=yjjQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313352.1;locus_tag=AC56_RS00205;product=helix-turn-helix domain-containing protein;protein_id=WP_000936614.1;transl_table=11
NZ_JJLS01000305.1	RefSeq	gene	17273	17950	.	+	.	ID=gene-AC56_RS00200;Name=bglJ;gbkey=Gene;gene=bglJ;gene_biotype=protein_coding;locus_tag=AC56_RS00200;old_locus_tag=AC56_4903
NZ_JJLS01000305.1	Protein Homology	CDS	17273	17950	.	+	0	ID=cds-WP_001300509.1;Parent=gene-AC56_RS00200;Dbxref=GenBank:WP_001300509.1;Name=WP_001300509.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=bglJ;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418786.4;locus_tag=AC56_RS00200;product=DNA-binding transcriptional activator BglJ;protein_id=WP_001300509.1;transl_table=11
NZ_JJLS01000305.1	RefSeq	gene	17988	18456	.	-	.	ID=gene-AC56_RS00195;Name=fhuF;end_range=18456,.;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=AC56_RS00195;old_locus_tag=AC56_4904;partial=true
NZ_JJLS01000305.1	Protein Homology	CDS	17988	18456	.	-	1	ID=cds-WP_032282947.1;Parent=gene-AC56_RS00195;Dbxref=GenBank:WP_032282947.1;Name=WP_032282947.1;Ontology_term=GO:0033214,GO:0008199,GO:0016491,GO:0051537;end_range=18456,.;gbkey=CDS;gene=fhuF;go_function=ferric iron binding|0008199||IEA,oxidoreductase activity|0016491||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=siderophore-dependent iron import into cell|0033214||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313354.1;locus_tag=AC56_RS00195;partial=true;product=siderophore-iron reductase FhuF;protein_id=WP_032282947.1;transl_table=11
##sequence-region NZ_JJLS01000306.1 1 39807
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444191
NZ_JJLS01000306.1	RefSeq	region	1	39807	.	+	.	ID=NZ_JJLS01000306.1:1..39807;Dbxref=taxon:1444191;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-182-04_S3_C3
NZ_JJLS01000306.1	RefSeq	gene	158	1189	.	-	.	ID=gene-AC56_RS00190;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=AC56_RS00190;old_locus_tag=AC56_4905
NZ_JJLS01000306.1	Protein Homology	CDS	158	1189	.	-	0	ID=cds-WP_001272323.1-3;Parent=gene-AC56_RS00190;Dbxref=GenBank:WP_001272323.1;Name=WP_001272323.1;Ontology_term=GO:0006364,GO:0003676,GO:0008990;gbkey=CDS;gene=rsmC;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313356.1;locus_tag=AC56_RS00190;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=WP_001272323.1;transl_table=11
NZ_JJLS01000306.1	RefSeq	gene	1292	1705	.	+	.	ID=gene-AC56_RS00185;Name=holD;gbkey=Gene;gene=holD;gene_biotype=protein_coding;locus_tag=AC56_RS00185;old_locus_tag=AC56_4906
NZ_JJLS01000306.1	Protein Homology	CDS	1292	1705	.	+	0	ID=cds-WP_000204018.1;Parent=gene-AC56_RS00185;Dbxref=GenBank:WP_000204018.1;Name=WP_000204018.1;gbkey=CDS;gene=holD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313357.1;locus_tag=AC56_RS00185;product=DNA polymerase III subunit psi;protein_id=WP_000204018.1;transl_table=11
NZ_JJLS01000306.1	RefSeq	gene	1674	2120	.	+	.	ID=gene-AC56_RS00180;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=AC56_RS00180;old_locus_tag=AC56_4907
NZ_JJLS01000306.1	Protein Homology	CDS	1674	2120	.	+	0	ID=cds-WP_001092461.1;Parent=gene-AC56_RS00180;Dbxref=GenBank:WP_001092461.1;Name=WP_001092461.1;Ontology_term=GO:0006474,GO:0008080;gbkey=CDS;gene=rimI;go_function=N-acetyltransferase activity|0008080||IEA;go_process=N-terminal protein amino acid acetylation|0006474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313358.1;locus_tag=AC56_RS00180;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_001092461.1;transl_table=11
NZ_JJLS01000306.1	RefSeq	gene	2135	2812	.	+	.	ID=gene-AC56_RS00175;Name=yjjG;gbkey=Gene;gene=yjjG;gene_biotype=protein_coding;locus_tag=AC56_RS00175;old_locus_tag=AC56_4908
NZ_JJLS01000306.1	Protein Homology	CDS	2135	2812	.	+	0	ID=cds-WP_000870712.1;Parent=gene-AC56_RS00175;Dbxref=GenBank:WP_000870712.1;Name=WP_000870712.1;Ontology_term=GO:0008253;gbkey=CDS;gene=yjjG;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313359.1;locus_tag=AC56_RS00175;product=pyrimidine 5'-nucleotidase;protein_id=WP_000870712.1;transl_table=11
NZ_JJLS01000306.1	RefSeq	gene	2903	4492	.	+	.	ID=gene-AC56_RS00170;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=AC56_RS00170;old_locus_tag=AC56_4909
NZ_JJLS01000306.1	Protein Homology	CDS	2903	4492	.	+	0	ID=cds-WP_000175943.1;Parent=gene-AC56_RS00170;Dbxref=GenBank:WP_000175943.1;Name=WP_000175943.1;Ontology_term=GO:0006415,GO:0003747,GO:0003924,GO:0005525;gbkey=CDS;gene=prfC;go_function=translation release factor activity|0003747||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313360.1;locus_tag=AC56_RS00170;product=peptide chain release factor 3;protein_id=WP_000175943.1;transl_table=11
NZ_JJLS01000306.1	RefSeq	gene	4885	5490	.	+	.	ID=gene-AC56_RS00165;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=AC56_RS00165;old_locus_tag=AC56_4910
NZ_JJLS01000306.1	Protein Homology	CDS	4885	5490	.	+	0	ID=cds-WP_001295748.1;Parent=gene-AC56_RS00165;Dbxref=GenBank:WP_001295748.1;Name=WP_001295748.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418793.1;locus_tag=AC56_RS00165;product=molecular chaperone OsmY;protein_id=WP_001295748.1;transl_table=11
NZ_JJLS01000306.1	RefSeq	gene	5617	5778	.	+	.	ID=gene-AC56_RS00160;Name=ytjA;gbkey=Gene;gene=ytjA;gene_biotype=protein_coding;locus_tag=AC56_RS00160;old_locus_tag=AC56_4911
NZ_JJLS01000306.1	Protein Homology	CDS	5617	5778	.	+	0	ID=cds-WP_000490275.1;Parent=gene-AC56_RS00160;Dbxref=GenBank:WP_000490275.1;Name=WP_000490275.1;gbkey=CDS;gene=ytjA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887716.1;locus_tag=AC56_RS00160;product=DUF1328 domain-containing protein;protein_id=WP_000490275.1;transl_table=11
NZ_JJLS01000306.1	RefSeq	gene	5900	6973	.	+	.	ID=gene-AC56_RS00155;Name=yjjU;gbkey=Gene;gene=yjjU;gene_biotype=protein_coding;locus_tag=AC56_RS00155;old_locus_tag=AC56_4912
NZ_JJLS01000306.1	Protein Homology	CDS	5900	6973	.	+	0	ID=cds-WP_001300357.1;Parent=gene-AC56_RS00155;Dbxref=GenBank:WP_001300357.1;Name=WP_001300357.1;gbkey=CDS;gene=yjjU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418794.1;locus_tag=AC56_RS00155;product=patatin-like phospholipase family protein;protein_id=WP_001300357.1;transl_table=11
NZ_JJLS01000306.1	RefSeq	gene	6970	7752	.	+	.	ID=gene-AC56_RS00150;Name=yjjV;gbkey=Gene;gene=yjjV;gene_biotype=protein_coding;locus_tag=AC56_RS00150;old_locus_tag=AC56_4913
NZ_JJLS01000306.1	Protein Homology	CDS	6970	7752	.	+	0	ID=cds-WP_000563058.1-2;Parent=gene-AC56_RS00150;Dbxref=GenBank:WP_000563058.1;Name=WP_000563058.1;Ontology_term=GO:0016788;gbkey=CDS;gene=yjjV;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313363.2;locus_tag=AC56_RS00150;product=metal-dependent hydrolase;protein_id=WP_000563058.1;transl_table=11
NZ_JJLS01000306.1	RefSeq	gene	8269	9132	.	-	.	ID=gene-AC56_RS00145;Name=yjjW;gbkey=Gene;gene=yjjW;gene_biotype=protein_coding;locus_tag=AC56_RS00145;old_locus_tag=AC56_4914
NZ_JJLS01000306.1	Protein Homology	CDS	8269	9132	.	-	0	ID=cds-WP_032279342.1;Parent=gene-AC56_RS00145;Dbxref=GenBank:WP_032279342.1;Name=WP_032279342.1;Ontology_term=GO:0051539,GO:1904047;gbkey=CDS;gene=yjjW;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418796.1;locus_tag=AC56_RS00145;product=YjjW family glycine radical enzyme activase;protein_id=WP_032279342.1;transl_table=11
NZ_JJLS01000306.1	RefSeq	gene	9104	10654	.	-	.	ID=gene-AC56_RS00140;Name=yjjI;gbkey=Gene;gene=yjjI;gene_biotype=protein_coding;locus_tag=AC56_RS00140;old_locus_tag=AC56_4915
NZ_JJLS01000306.1	Protein Homology	CDS	9104	10654	.	-	0	ID=cds-WP_001143194.1;Parent=gene-AC56_RS00140;Dbxref=GenBank:WP_001143194.1;Name=WP_001143194.1;Ontology_term=GO:0003824;gbkey=CDS;gene=yjjI;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418797.1;locus_tag=AC56_RS00140;product=YjjI family glycine radical enzyme;protein_id=WP_001143194.1;transl_table=11
NZ_JJLS01000306.1	RefSeq	gene	10912	11691	.	+	.	ID=gene-AC56_RS00135;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=AC56_RS00135;old_locus_tag=AC56_4917
NZ_JJLS01000306.1	Protein Homology	CDS	10912	11691	.	+	0	ID=cds-WP_001295412.1;Parent=gene-AC56_RS00135;Dbxref=GenBank:WP_001295412.1;Name=WP_001295412.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005097947.1;locus_tag=AC56_RS00135;product=deoxyribose-phosphate aldolase;protein_id=WP_001295412.1;transl_table=11
NZ_JJLS01000306.1	RefSeq	gene	11818	13140	.	+	.	ID=gene-AC56_RS00130;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=AC56_RS00130;old_locus_tag=AC56_4918
NZ_JJLS01000306.1	Protein Homology	CDS	11818	13140	.	+	0	ID=cds-WP_000477811.1;Parent=gene-AC56_RS00130;Dbxref=GenBank:WP_000477811.1;Name=WP_000477811.1;Ontology_term=GO:0006213,GO:0009032;gbkey=CDS;gene=deoA;go_function=thymidine phosphorylase activity|0009032||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123902.1;locus_tag=AC56_RS00130;product=thymidine phosphorylase;protein_id=WP_000477811.1;transl_table=11
NZ_JJLS01000306.1	RefSeq	gene	13192	14415	.	+	.	ID=gene-AC56_RS00125;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=AC56_RS00125;old_locus_tag=AC56_4919
NZ_JJLS01000306.1	Protein Homology	CDS	13192	14415	.	+	0	ID=cds-WP_000816471.1;Parent=gene-AC56_RS00125;Dbxref=GenBank:WP_000816471.1;Name=WP_000816471.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973,GO:0005737;gbkey=CDS;gene=deoB;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313369.1;locus_tag=AC56_RS00125;product=phosphopentomutase;protein_id=WP_000816471.1;transl_table=11
NZ_JJLS01000306.1	RefSeq	gene	14495	15214	.	+	.	ID=gene-AC56_RS00120;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=AC56_RS00120;old_locus_tag=AC56_4920
NZ_JJLS01000306.1	Protein Homology	CDS	14495	15214	.	+	0	ID=cds-WP_000224879.1;Parent=gene-AC56_RS00120;Dbxref=GenBank:WP_000224879.1;Name=WP_000224879.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710124.2;locus_tag=AC56_RS00120;product=purine-nucleoside phosphorylase;protein_id=WP_000224879.1;transl_table=11
NZ_JJLS01000306.1	RefSeq	gene	15374	15637	.	-	.	ID=gene-AC56_RS00115;Name=AC56_RS00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS00115;old_locus_tag=AC56_4921
NZ_JJLS01000306.1	Protein Homology	CDS	15374	15637	.	-	0	ID=cds-WP_000566150.1;Parent=gene-AC56_RS00115;Dbxref=GenBank:WP_000566150.1;Name=WP_000566150.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313371.1;locus_tag=AC56_RS00115;product=helix-turn-helix domain-containing protein;protein_id=WP_000566150.1;transl_table=11
NZ_JJLS01000306.1	RefSeq	gene	15669	16685	.	-	.	ID=gene-AC56_RS32510;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=AC56_RS32510;old_locus_tag=AC56_4922
NZ_JJLS01000306.1	Protein Homology	CDS	15669	16685	.	-	0	ID=cds-WP_000105862.1;Parent=gene-AC56_RS32510;Dbxref=GenBank:WP_000105862.1;Name=WP_000105862.1;gbkey=CDS;gene=lplA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418803.1;locus_tag=AC56_RS32510;product=lipoate--protein ligase LplA;protein_id=WP_000105862.1;transl_table=11
NZ_JJLS01000306.1	RefSeq	gene	16713	17357	.	-	.	ID=gene-AC56_RS32515;Name=ytjB;gbkey=Gene;gene=ytjB;gene_biotype=protein_coding;locus_tag=AC56_RS32515;old_locus_tag=AC56_4923
NZ_JJLS01000306.1	Protein Homology	CDS	16713	17357	.	-	0	ID=cds-WP_000124615.1;Parent=gene-AC56_RS32515;Dbxref=GenBank:WP_000124615.1;Name=WP_000124615.1;gbkey=CDS;gene=ytjB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418804.1;locus_tag=AC56_RS32515;product=YtjB family periplasmic protein;protein_id=WP_000124615.1;transl_table=11
NZ_JJLS01000306.1	RefSeq	gene	17463	18431	.	+	.	ID=gene-AC56_RS00100;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=AC56_RS00100;old_locus_tag=AC56_4924
NZ_JJLS01000306.1	Protein Homology	CDS	17463	18431	.	+	0	ID=cds-WP_001132955.1;Parent=gene-AC56_RS00100;Dbxref=GenBank:WP_001132955.1;Name=WP_001132955.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313373.1;locus_tag=AC56_RS00100;product=phosphoserine phosphatase;protein_id=WP_001132955.1;transl_table=11
NZ_JJLS01000306.1	RefSeq	gene	18480	19862	.	+	.	ID=gene-AC56_RS00095;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=AC56_RS00095;old_locus_tag=AC56_4925
NZ_JJLS01000306.1	Protein Homology	CDS	18480	19862	.	+	0	ID=cds-WP_001029698.1;Parent=gene-AC56_RS00095;Dbxref=GenBank:WP_001029698.1;Name=WP_001029698.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399683.1;locus_tag=AC56_RS00095;product=DNA repair protein RadA;protein_id=WP_001029698.1;transl_table=11
NZ_JJLS01000306.1	RefSeq	gene	19883	21115	.	+	.	ID=gene-AC56_RS00090;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=AC56_RS00090;old_locus_tag=AC56_4926
NZ_JJLS01000306.1	Protein Homology	CDS	19883	21115	.	+	0	ID=cds-WP_000093810.1;Parent=gene-AC56_RS00090;Dbxref=GenBank:WP_000093810.1;Name=WP_000093810.1;Ontology_term=GO:0009058,GO:0000309,GO:0003677,GO:0050262;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,DNA binding|0003677||IEA,ribosylnicotinamide kinase activity|0050262||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418807.4;locus_tag=AC56_RS00090;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;protein_id=WP_000093810.1;transl_table=11
NZ_JJLS01000306.1	RefSeq	pseudogene	21154	21261	.	+	.	ID=gene-AC56_RS33630;Name=nadS;end_range=21261,.;gbkey=Gene;gene=nadS;gene_biotype=pseudogene;locus_tag=AC56_RS33630;partial=true;pseudo=true;start_range=.,21154
NZ_JJLS01000306.1	Protein Homology	CDS	21154	21261	.	+	0	ID=cds-AC56_RS33630;Parent=gene-AC56_RS33630;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=21261,.;gbkey=CDS;gene=nadS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007431.1;locus_tag=AC56_RS33630;partial=true;product=NadS family protein;pseudo=true;start_range=.,21154;transl_table=11
NZ_JJLS01000306.1	RefSeq	gene	21422	23089	.	-	.	ID=gene-AC56_RS00080;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=AC56_RS00080;old_locus_tag=AC56_4928
NZ_JJLS01000306.1	Protein Homology	CDS	21422	23089	.	-	0	ID=cds-WP_000046749.1;Parent=gene-AC56_RS00080;Dbxref=GenBank:WP_000046749.1;Name=WP_000046749.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145039.1;locus_tag=AC56_RS00080;product=energy-dependent translational throttle protein EttA;protein_id=WP_000046749.1;transl_table=11
NZ_JJLS01000306.1	RefSeq	gene	23300	25237	.	+	.	ID=gene-AC56_RS00075;Name=sltY;gbkey=Gene;gene=sltY;gene_biotype=protein_coding;locus_tag=AC56_RS00075;old_locus_tag=AC56_4929
NZ_JJLS01000306.1	Protein Homology	CDS	23300	25237	.	+	0	ID=cds-WP_000409456.1;Parent=gene-AC56_RS00075;Dbxref=GenBank:WP_000409456.1;Name=WP_000409456.1;Ontology_term=GO:0000270,GO:0004553,GO:0008933,GO:0016020,GO:0042597;gbkey=CDS;gene=sltY;go_component=membrane|0016020||IEA,periplasmic space|0042597||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418809.4;locus_tag=AC56_RS00075;product=murein transglycosylase;protein_id=WP_000409456.1;transl_table=11
NZ_JJLS01000306.1	RefSeq	gene	25327	25653	.	+	.	ID=gene-AC56_RS00070;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=AC56_RS00070;old_locus_tag=AC56_4930
NZ_JJLS01000306.1	Protein Homology	CDS	25327	25653	.	+	0	ID=cds-WP_000068679.1;Parent=gene-AC56_RS00070;Dbxref=GenBank:WP_000068679.1;Name=WP_000068679.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=trpR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418810.1;locus_tag=AC56_RS00070;product=trp operon repressor;protein_id=WP_000068679.1;transl_table=11
NZ_JJLS01000306.1	RefSeq	gene	25738	26259	.	-	.	ID=gene-AC56_RS00065;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=AC56_RS00065;old_locus_tag=AC56_4931
NZ_JJLS01000306.1	Protein Homology	CDS	25738	26259	.	-	0	ID=cds-WP_001341279.1;Parent=gene-AC56_RS00065;Dbxref=GenBank:WP_001341279.1;Name=WP_001341279.1;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001649724.1;locus_tag=AC56_RS00065;product=inosine/xanthosine triphosphatase;protein_id=WP_001341279.1;transl_table=11
NZ_JJLS01000306.1	RefSeq	gene	26311	26958	.	+	.	ID=gene-AC56_RS00060;Name=gpmB;gbkey=Gene;gene=gpmB;gene_biotype=protein_coding;locus_tag=AC56_RS00060;old_locus_tag=AC56_4932
NZ_JJLS01000306.1	Protein Homology	CDS	26311	26958	.	+	0	ID=cds-WP_000942344.1;Parent=gene-AC56_RS00060;Dbxref=GenBank:WP_000942344.1;Name=WP_000942344.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmB;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313380.1;locus_tag=AC56_RS00060;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB;protein_id=WP_000942344.1;transl_table=11
NZ_JJLS01000306.1	RefSeq	gene	26955	27824	.	-	.	ID=gene-AC56_RS00055;Name=robA;gbkey=Gene;gene=robA;gene_biotype=protein_coding;locus_tag=AC56_RS00055;old_locus_tag=AC56_4933
NZ_JJLS01000306.1	Protein Homology	CDS	26955	27824	.	-	0	ID=cds-WP_000371666.1;Parent=gene-AC56_RS00055;Dbxref=GenBank:WP_000371666.1;Name=WP_000371666.1;gbkey=CDS;gene=robA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313381.1;locus_tag=AC56_RS00055;product=MDR efflux pump AcrAB transcriptional activator RobA;protein_id=WP_000371666.1;transl_table=11
NZ_JJLS01000306.1	RefSeq	gene	28035	28508	.	+	.	ID=gene-AC56_RS00050;Name=creA;gbkey=Gene;gene=creA;gene_biotype=protein_coding;locus_tag=AC56_RS00050;old_locus_tag=AC56_4934
NZ_JJLS01000306.1	Protein Homology	CDS	28035	28508	.	+	0	ID=cds-WP_000875487.1;Parent=gene-AC56_RS00050;Dbxref=GenBank:WP_000875487.1;Name=WP_000875487.1;gbkey=CDS;gene=creA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313382.1;locus_tag=AC56_RS00050;product=protein CreA;protein_id=WP_000875487.1;transl_table=11
NZ_JJLS01000306.1	RefSeq	gene	28521	29210	.	+	.	ID=gene-AC56_RS00045;Name=creB;gbkey=Gene;gene=creB;gene_biotype=protein_coding;locus_tag=AC56_RS00045;old_locus_tag=AC56_4935
NZ_JJLS01000306.1	Protein Homology	CDS	28521	29210	.	+	0	ID=cds-WP_001188664.1;Parent=gene-AC56_RS00045;Dbxref=GenBank:WP_001188664.1;Name=WP_001188664.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=creB;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710136.1;locus_tag=AC56_RS00045;product=two-component system response regulator CreB;protein_id=WP_001188664.1;transl_table=11
NZ_JJLS01000306.1	RefSeq	gene	29210	30634	.	+	.	ID=gene-AC56_RS00040;Name=creC;gbkey=Gene;gene=creC;gene_biotype=protein_coding;locus_tag=AC56_RS00040;old_locus_tag=AC56_4936
NZ_JJLS01000306.1	Protein Homology	CDS	29210	30634	.	+	0	ID=cds-WP_001219615.1;Parent=gene-AC56_RS00040;Dbxref=GenBank:WP_001219615.1;Name=WP_001219615.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=creC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313384.1;locus_tag=AC56_RS00040;product=two-component system sensor histidine kinase CreC;protein_id=WP_001219615.1;transl_table=11
NZ_JJLS01000306.1	RefSeq	gene	30692	32044	.	+	.	ID=gene-AC56_RS00035;Name=creD;gbkey=Gene;gene=creD;gene_biotype=protein_coding;locus_tag=AC56_RS00035;old_locus_tag=AC56_4937
NZ_JJLS01000306.1	Protein Homology	CDS	30692	32044	.	+	0	ID=cds-WP_032279350.1;Parent=gene-AC56_RS00035;Dbxref=GenBank:WP_032279350.1;Name=WP_032279350.1;gbkey=CDS;gene=creD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313385.1;locus_tag=AC56_RS00035;product=cell envelope integrity protein CreD;protein_id=WP_032279350.1;transl_table=11
NZ_JJLS01000306.1	RefSeq	gene	32104	32820	.	-	.	ID=gene-AC56_RS00030;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=AC56_RS00030;old_locus_tag=AC56_4938
NZ_JJLS01000306.1	Protein Homology	CDS	32104	32820	.	-	0	ID=cds-WP_001194358.1;Parent=gene-AC56_RS00030;Dbxref=GenBank:WP_001194358.1;Name=WP_001194358.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003621071.1;locus_tag=AC56_RS00030;product=two-component system response regulator ArcA;protein_id=WP_001194358.1;transl_table=11
NZ_JJLS01000306.1	RefSeq	gene	32916	33056	.	+	.	ID=gene-AC56_RS0127595;Name=yjjY;gbkey=Gene;gene=yjjY;gene_biotype=protein_coding;locus_tag=AC56_RS0127595
NZ_JJLS01000306.1	Protein Homology	CDS	32916	33056	.	+	0	ID=cds-WP_001303782.1;Parent=gene-AC56_RS0127595;Dbxref=GenBank:WP_001303782.1;Name=WP_001303782.1;gbkey=CDS;gene=yjjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418819.1;locus_tag=AC56_RS0127595;product=protein YjjY;protein_id=WP_001303782.1;transl_table=11
NZ_JJLS01000306.1	RefSeq	gene	33456	34142	.	+	.	ID=gene-AC56_RS00025;Name=yjtD;gbkey=Gene;gene=yjtD;gene_biotype=protein_coding;locus_tag=AC56_RS00025;old_locus_tag=AC56_4939
NZ_JJLS01000306.1	Protein Homology	CDS	33456	34142	.	+	0	ID=cds-WP_001223182.1;Parent=gene-AC56_RS00025;Dbxref=GenBank:WP_001223182.1;Name=WP_001223182.1;gbkey=CDS;gene=yjtD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710140.2;locus_tag=AC56_RS00025;product=tRNA/rRNA methyltransferase;protein_id=WP_001223182.1;transl_table=11
NZ_JJLS01000306.1	RefSeq	gene	34356	34421	.	+	.	ID=gene-AC56_RS0127600;Name=thrL;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;locus_tag=AC56_RS0127600
NZ_JJLS01000306.1	Protein Homology	CDS	34356	34421	.	+	0	ID=cds-WP_001386572.1;Parent=gene-AC56_RS0127600;Dbxref=GenBank:WP_001386572.1;Name=WP_001386572.1;gbkey=CDS;gene=thrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414542.1;locus_tag=AC56_RS0127600;product=thr operon leader peptide;protein_id=WP_001386572.1;transl_table=11
NZ_JJLS01000306.1	cmsearch	sequence_feature	34357	34476	.	+	.	ID=id-NZ_JJLS01000306.1:34357..34476;Dbxref=RFAM:RF00506;Note=Thr leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5
NZ_JJLS01000306.1	RefSeq	gene	34503	36965	.	+	.	ID=gene-AC56_RS00020;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=AC56_RS00020;old_locus_tag=AC56_4940
NZ_JJLS01000306.1	Protein Homology	CDS	34503	36965	.	+	0	ID=cds-WP_001264726.1;Parent=gene-AC56_RS00020;Dbxref=GenBank:WP_001264726.1;Name=WP_001264726.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=AC56_RS00020;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_001264726.1;transl_table=11
NZ_JJLS01000306.1	RefSeq	gene	36967	37899	.	+	.	ID=gene-AC56_RS00015;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=AC56_RS00015;old_locus_tag=AC56_4941
NZ_JJLS01000306.1	Protein Homology	CDS	36967	37899	.	+	0	ID=cds-WP_000241660.1;Parent=gene-AC56_RS00015;Dbxref=GenBank:WP_000241660.1;Name=WP_000241660.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308030.1;locus_tag=AC56_RS00015;product=homoserine kinase;protein_id=WP_000241660.1;transl_table=11
NZ_JJLS01000306.1	RefSeq	gene	37900	39186	.	+	.	ID=gene-AC56_RS00010;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=AC56_RS00010;old_locus_tag=AC56_4942
NZ_JJLS01000306.1	Protein Homology	CDS	37900	39186	.	+	0	ID=cds-WP_000781063.1;Parent=gene-AC56_RS00010;Dbxref=GenBank:WP_000781063.1;Name=WP_000781063.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308031.1;locus_tag=AC56_RS00010;product=threonine synthase;protein_id=WP_000781063.1;transl_table=11
NZ_JJLS01000306.1	RefSeq	gene	39463	39807	.	-	.	ID=gene-AC56_RS00005;Name=AC56_RS00005;end_range=39807,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC56_RS00005;old_locus_tag=AC56_4944;partial=true
NZ_JJLS01000306.1	Protein Homology	CDS	39463	39807	.	-	0	ID=cds-WP_032282948.1;Parent=gene-AC56_RS00005;Dbxref=GenBank:WP_032282948.1;Name=WP_032282948.1;end_range=39807,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC56_RS00005;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032282948.1;transl_table=11
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