##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM62798v1 #!genome-build-accession NCBI_Assembly:GCF_000627985.1 #!annotation-date 06/15/2025 09:38:16 #!annotation-source NCBI RefSeq GCF_000627985.1-RS_2025_06_15 ##sequence-region NZ_JJMC01000001.1 1 252302 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000001.1 RefSeq region 1 252302 . + . ID=NZ_JJMC01000001.1:1..252302;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000001.1 RefSeq gene 1 835 . + . ID=gene-AB25_RS24310;Name=AB25_RS24310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS24310;old_locus_tag=AB25_0001;partial=true;start_range=.,1 NZ_JJMC01000001.1 Protein Homology CDS 1 835 . + 1 ID=cds-WP_032261529.1;Parent=gene-AB25_RS24310;Dbxref=GenBank:WP_032261529.1;Name=WP_032261529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313362.1;locus_tag=AB25_RS24310;partial=true;product=patatin-like phospholipase family protein;protein_id=WP_032261529.1;start_range=.,1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 832 1614 . + . ID=gene-AB25_RS24305;Name=yjjV;gbkey=Gene;gene=yjjV;gene_biotype=protein_coding;locus_tag=AB25_RS24305;old_locus_tag=AB25_0002 NZ_JJMC01000001.1 Protein Homology CDS 832 1614 . + 0 ID=cds-WP_000563058.1;Parent=gene-AB25_RS24305;Dbxref=GenBank:WP_000563058.1;Name=WP_000563058.1;Ontology_term=GO:0016788;gbkey=CDS;gene=yjjV;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313363.2;locus_tag=AB25_RS24305;product=metal-dependent hydrolase;protein_id=WP_000563058.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 2131 2994 . - . ID=gene-AB25_RS24300;Name=yjjW;gbkey=Gene;gene=yjjW;gene_biotype=protein_coding;locus_tag=AB25_RS24300;old_locus_tag=AB25_0003 NZ_JJMC01000001.1 Protein Homology CDS 2131 2994 . - 0 ID=cds-WP_001088379.1;Parent=gene-AB25_RS24300;Dbxref=GenBank:WP_001088379.1;Name=WP_001088379.1;Ontology_term=GO:0051539,GO:1904047;gbkey=CDS;gene=yjjW;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418796.1;locus_tag=AB25_RS24300;product=YjjW family glycine radical enzyme activase;protein_id=WP_001088379.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 2966 4516 . - . ID=gene-AB25_RS24295;Name=yjjI;gbkey=Gene;gene=yjjI;gene_biotype=protein_coding;locus_tag=AB25_RS24295;old_locus_tag=AB25_0004 NZ_JJMC01000001.1 Protein Homology CDS 2966 4516 . - 0 ID=cds-WP_001143253.1;Parent=gene-AB25_RS24295;Dbxref=GenBank:WP_001143253.1;Name=WP_001143253.1;Ontology_term=GO:0003824;gbkey=CDS;gene=yjjI;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418797.1;locus_tag=AB25_RS24295;product=YjjI family glycine radical enzyme;protein_id=WP_001143253.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 4774 5553 . + . ID=gene-AB25_RS24290;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=AB25_RS24290;old_locus_tag=AB25_0006 NZ_JJMC01000001.1 Protein Homology CDS 4774 5553 . + 0 ID=cds-WP_001295412.1;Parent=gene-AB25_RS24290;Dbxref=GenBank:WP_001295412.1;Name=WP_001295412.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005097947.1;locus_tag=AB25_RS24290;product=deoxyribose-phosphate aldolase;protein_id=WP_001295412.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 5680 7002 . + . ID=gene-AB25_RS24285;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=AB25_RS24285;old_locus_tag=AB25_0007 NZ_JJMC01000001.1 Protein Homology CDS 5680 7002 . + 0 ID=cds-WP_000477811.1;Parent=gene-AB25_RS24285;Dbxref=GenBank:WP_000477811.1;Name=WP_000477811.1;Ontology_term=GO:0006213,GO:0009032;gbkey=CDS;gene=deoA;go_function=thymidine phosphorylase activity|0009032||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123902.1;locus_tag=AB25_RS24285;product=thymidine phosphorylase;protein_id=WP_000477811.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 7054 8277 . + . ID=gene-AB25_RS24280;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=AB25_RS24280;old_locus_tag=AB25_0008 NZ_JJMC01000001.1 Protein Homology CDS 7054 8277 . + 0 ID=cds-WP_000816471.1;Parent=gene-AB25_RS24280;Dbxref=GenBank:WP_000816471.1;Name=WP_000816471.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973,GO:0005737;gbkey=CDS;gene=deoB;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313369.1;locus_tag=AB25_RS24280;product=phosphopentomutase;protein_id=WP_000816471.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 8357 9076 . + . ID=gene-AB25_RS24275;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=AB25_RS24275;old_locus_tag=AB25_0009 NZ_JJMC01000001.1 Protein Homology CDS 8357 9076 . + 0 ID=cds-WP_000224877.1;Parent=gene-AB25_RS24275;Dbxref=GenBank:WP_000224877.1;Name=WP_000224877.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313370.1;locus_tag=AB25_RS24275;product=purine-nucleoside phosphorylase;protein_id=WP_000224877.1;transl_table=11 NZ_JJMC01000001.1 RefSeq pseudogene 9237 9500 . - . ID=gene-AB25_RS32345;Name=AB25_RS32345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32345;pseudo=true NZ_JJMC01000001.1 Protein Homology CDS 9237 9500 . - 0 ID=cds-AB25_RS32345;Parent=gene-AB25_RS32345;Note=internal stop;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313371.1;locus_tag=AB25_RS32345;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 9532 10548 . - . ID=gene-AB25_RS30915;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=AB25_RS30915;old_locus_tag=AB25_0011 NZ_JJMC01000001.1 Protein Homology CDS 9532 10548 . - 0 ID=cds-WP_000105889.1;Parent=gene-AB25_RS30915;Dbxref=GenBank:WP_000105889.1;Name=WP_000105889.1;gbkey=CDS;gene=lplA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418803.1;locus_tag=AB25_RS30915;product=lipoate--protein ligase LplA;protein_id=WP_000105889.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 10576 11220 . - . ID=gene-AB25_RS30920;Name=ytjB;gbkey=Gene;gene=ytjB;gene_biotype=protein_coding;locus_tag=AB25_RS30920;old_locus_tag=AB25_0012 NZ_JJMC01000001.1 Protein Homology CDS 10576 11220 . - 0 ID=cds-WP_000124615.1;Parent=gene-AB25_RS30920;Dbxref=GenBank:WP_000124615.1;Name=WP_000124615.1;gbkey=CDS;gene=ytjB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418804.1;locus_tag=AB25_RS30920;product=YtjB family periplasmic protein;protein_id=WP_000124615.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 11326 12294 . + . ID=gene-AB25_RS24255;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=AB25_RS24255;old_locus_tag=AB25_0013 NZ_JJMC01000001.1 Protein Homology CDS 11326 12294 . + 0 ID=cds-WP_001132956.1;Parent=gene-AB25_RS24255;Dbxref=GenBank:WP_001132956.1;Name=WP_001132956.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313373.1;locus_tag=AB25_RS24255;product=phosphoserine phosphatase;protein_id=WP_001132956.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 12343 13725 . + . ID=gene-AB25_RS24250;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=AB25_RS24250;old_locus_tag=AB25_0014 NZ_JJMC01000001.1 Protein Homology CDS 12343 13725 . + 0 ID=cds-WP_001029698.1;Parent=gene-AB25_RS24250;Dbxref=GenBank:WP_001029698.1;Name=WP_001029698.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399683.1;locus_tag=AB25_RS24250;product=DNA repair protein RadA;protein_id=WP_001029698.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 13746 14978 . + . ID=gene-AB25_RS24245;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=AB25_RS24245;old_locus_tag=AB25_0015 NZ_JJMC01000001.1 Protein Homology CDS 13746 14978 . + 0 ID=cds-WP_000093810.1;Parent=gene-AB25_RS24245;Dbxref=GenBank:WP_000093810.1;Name=WP_000093810.1;Ontology_term=GO:0009058,GO:0000309,GO:0003677,GO:0050262;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,DNA binding|0003677||IEA,ribosylnicotinamide kinase activity|0050262||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418807.4;locus_tag=AB25_RS24245;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;protein_id=WP_000093810.1;transl_table=11 NZ_JJMC01000001.1 RefSeq pseudogene 15029 15124 . + . ID=gene-AB25_RS32885;Name=AB25_RS32885;end_range=15124,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32885;partial=true;pseudo=true NZ_JJMC01000001.1 Protein Homology CDS 15029 15124 . + 0 ID=cds-AB25_RS32885;Parent=gene-AB25_RS32885;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=15124,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013097645.1;locus_tag=AB25_RS32885;partial=true;product=NadS family protein;pseudo=true;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 15285 16952 . - . ID=gene-AB25_RS24240;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=AB25_RS24240;old_locus_tag=AB25_0016 NZ_JJMC01000001.1 Protein Homology CDS 15285 16952 . - 0 ID=cds-WP_000046749.1;Parent=gene-AB25_RS24240;Dbxref=GenBank:WP_000046749.1;Name=WP_000046749.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145039.1;locus_tag=AB25_RS24240;product=energy-dependent translational throttle protein EttA;protein_id=WP_000046749.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 17163 19100 . + . ID=gene-AB25_RS24235;Name=sltY;gbkey=Gene;gene=sltY;gene_biotype=protein_coding;locus_tag=AB25_RS24235;old_locus_tag=AB25_0017 NZ_JJMC01000001.1 Protein Homology CDS 17163 19100 . + 0 ID=cds-WP_032206580.1;Parent=gene-AB25_RS24235;Dbxref=GenBank:WP_032206580.1;Name=WP_032206580.1;Ontology_term=GO:0000270,GO:0004553,GO:0008933,GO:0016020,GO:0042597;gbkey=CDS;gene=sltY;go_component=membrane|0016020||IEA,periplasmic space|0042597||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418809.4;locus_tag=AB25_RS24235;product=murein transglycosylase;protein_id=WP_032206580.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 19190 19516 . + . ID=gene-AB25_RS24230;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=AB25_RS24230;old_locus_tag=AB25_0018 NZ_JJMC01000001.1 Protein Homology CDS 19190 19516 . + 0 ID=cds-WP_000068679.1;Parent=gene-AB25_RS24230;Dbxref=GenBank:WP_000068679.1;Name=WP_000068679.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=trpR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418810.1;locus_tag=AB25_RS24230;product=trp operon repressor;protein_id=WP_000068679.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 19559 20071 . - . ID=gene-AB25_RS24225;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=AB25_RS24225;old_locus_tag=AB25_0019 NZ_JJMC01000001.1 Protein Homology CDS 19559 20071 . - 0 ID=cds-WP_001346116.1;Parent=gene-AB25_RS24225;Dbxref=GenBank:WP_001346116.1;Name=WP_001346116.1;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418811.2;locus_tag=AB25_RS24225;product=inosine/xanthosine triphosphatase;protein_id=WP_001346116.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 20123 20770 . + . ID=gene-AB25_RS24220;Name=gpmB;gbkey=Gene;gene=gpmB;gene_biotype=protein_coding;locus_tag=AB25_RS24220;old_locus_tag=AB25_0020 NZ_JJMC01000001.1 Protein Homology CDS 20123 20770 . + 0 ID=cds-WP_000942344.1;Parent=gene-AB25_RS24220;Dbxref=GenBank:WP_000942344.1;Name=WP_000942344.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmB;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313380.1;locus_tag=AB25_RS24220;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB;protein_id=WP_000942344.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 20767 21636 . - . ID=gene-AB25_RS24215;Name=robA;gbkey=Gene;gene=robA;gene_biotype=protein_coding;locus_tag=AB25_RS24215;old_locus_tag=AB25_0021 NZ_JJMC01000001.1 Protein Homology CDS 20767 21636 . - 0 ID=cds-WP_000371666.1;Parent=gene-AB25_RS24215;Dbxref=GenBank:WP_000371666.1;Name=WP_000371666.1;gbkey=CDS;gene=robA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313381.1;locus_tag=AB25_RS24215;product=MDR efflux pump AcrAB transcriptional activator RobA;protein_id=WP_000371666.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 21847 22320 . + . ID=gene-AB25_RS24210;Name=creA;gbkey=Gene;gene=creA;gene_biotype=protein_coding;locus_tag=AB25_RS24210;old_locus_tag=AB25_0022 NZ_JJMC01000001.1 Protein Homology CDS 21847 22320 . + 0 ID=cds-WP_000875487.1;Parent=gene-AB25_RS24210;Dbxref=GenBank:WP_000875487.1;Name=WP_000875487.1;gbkey=CDS;gene=creA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313382.1;locus_tag=AB25_RS24210;product=protein CreA;protein_id=WP_000875487.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 22333 23022 . + . ID=gene-AB25_RS24205;Name=creB;gbkey=Gene;gene=creB;gene_biotype=protein_coding;locus_tag=AB25_RS24205;old_locus_tag=AB25_0023 NZ_JJMC01000001.1 Protein Homology CDS 22333 23022 . + 0 ID=cds-WP_001188666.1;Parent=gene-AB25_RS24205;Dbxref=GenBank:WP_001188666.1;Name=WP_001188666.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=creB;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710136.1;locus_tag=AB25_RS24205;product=two-component system response regulator CreB;protein_id=WP_001188666.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 23022 24446 . + . ID=gene-AB25_RS24200;Name=creC;gbkey=Gene;gene=creC;gene_biotype=protein_coding;locus_tag=AB25_RS24200;old_locus_tag=AB25_0024 NZ_JJMC01000001.1 Protein Homology CDS 23022 24446 . + 0 ID=cds-WP_001219614.1;Parent=gene-AB25_RS24200;Dbxref=GenBank:WP_001219614.1;Name=WP_001219614.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=creC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313384.1;locus_tag=AB25_RS24200;product=two-component system sensor histidine kinase CreC;protein_id=WP_001219614.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 24504 25856 . + . ID=gene-AB25_RS24195;Name=creD;gbkey=Gene;gene=creD;gene_biotype=protein_coding;locus_tag=AB25_RS24195;old_locus_tag=AB25_0025 NZ_JJMC01000001.1 Protein Homology CDS 24504 25856 . + 0 ID=cds-WP_000920307.1;Parent=gene-AB25_RS24195;Dbxref=GenBank:WP_000920307.1;Name=WP_000920307.1;gbkey=CDS;gene=creD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313385.1;locus_tag=AB25_RS24195;product=cell envelope integrity protein CreD;protein_id=WP_000920307.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 25915 26631 . - . ID=gene-AB25_RS24190;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=AB25_RS24190;old_locus_tag=AB25_0026 NZ_JJMC01000001.1 Protein Homology CDS 25915 26631 . - 0 ID=cds-WP_001194358.1;Parent=gene-AB25_RS24190;Dbxref=GenBank:WP_001194358.1;Name=WP_001194358.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003621071.1;locus_tag=AB25_RS24190;product=two-component system response regulator ArcA;protein_id=WP_001194358.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 26727 26867 . + . ID=gene-AB25_RS0124325;Name=yjjY;gbkey=Gene;gene=yjjY;gene_biotype=protein_coding;locus_tag=AB25_RS0124325 NZ_JJMC01000001.1 Protein Homology CDS 26727 26867 . + 0 ID=cds-WP_001303782.1;Parent=gene-AB25_RS0124325;Dbxref=GenBank:WP_001303782.1;Name=WP_001303782.1;gbkey=CDS;gene=yjjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418819.1;locus_tag=AB25_RS0124325;product=protein YjjY;protein_id=WP_001303782.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 27267 27953 . + . ID=gene-AB25_RS24185;Name=yjtD;gbkey=Gene;gene=yjtD;gene_biotype=protein_coding;locus_tag=AB25_RS24185;old_locus_tag=AB25_0027 NZ_JJMC01000001.1 Protein Homology CDS 27267 27953 . + 0 ID=cds-WP_001223186.1;Parent=gene-AB25_RS24185;Dbxref=GenBank:WP_001223186.1;Name=WP_001223186.1;gbkey=CDS;gene=yjtD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710140.2;locus_tag=AB25_RS24185;product=tRNA/rRNA methyltransferase;protein_id=WP_001223186.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 28167 28232 . + . ID=gene-AB25_RS0124330;Name=thrL;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;locus_tag=AB25_RS0124330 NZ_JJMC01000001.1 Protein Homology CDS 28167 28232 . + 0 ID=cds-WP_001386572.1;Parent=gene-AB25_RS0124330;Dbxref=GenBank:WP_001386572.1;Name=WP_001386572.1;gbkey=CDS;gene=thrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414542.1;locus_tag=AB25_RS0124330;product=thr operon leader peptide;protein_id=WP_001386572.1;transl_table=11 NZ_JJMC01000001.1 cmsearch sequence_feature 28168 28287 . + . ID=id-NZ_JJMC01000001.1:28168..28287;Dbxref=RFAM:RF00506;Note=Thr leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JJMC01000001.1 RefSeq gene 28313 30775 . + . ID=gene-AB25_RS24180;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=AB25_RS24180;old_locus_tag=AB25_0028 NZ_JJMC01000001.1 Protein Homology CDS 28313 30775 . + 0 ID=cds-WP_032284615.1;Parent=gene-AB25_RS24180;Dbxref=GenBank:WP_032284615.1;Name=WP_032284615.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=AB25_RS24180;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_032284615.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 30777 31709 . + . ID=gene-AB25_RS24175;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=AB25_RS24175;old_locus_tag=AB25_0029 NZ_JJMC01000001.1 Protein Homology CDS 30777 31709 . + 0 ID=cds-WP_000241660.1;Parent=gene-AB25_RS24175;Dbxref=GenBank:WP_000241660.1;Name=WP_000241660.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308030.1;locus_tag=AB25_RS24175;product=homoserine kinase;protein_id=WP_000241660.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 31710 32996 . + . ID=gene-AB25_RS24170;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=AB25_RS24170;old_locus_tag=AB25_0030 NZ_JJMC01000001.1 Protein Homology CDS 31710 32996 . + 0 ID=cds-WP_000781063.1;Parent=gene-AB25_RS24170;Dbxref=GenBank:WP_000781063.1;Name=WP_000781063.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308031.1;locus_tag=AB25_RS24170;product=threonine synthase;protein_id=WP_000781063.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 33210 33506 . + . ID=gene-AB25_RS24165;Name=yaaX;gbkey=Gene;gene=yaaX;gene_biotype=protein_coding;locus_tag=AB25_RS24165;old_locus_tag=AB25_0031 NZ_JJMC01000001.1 Protein Homology CDS 33210 33506 . + 0 ID=cds-WP_000738723.1;Parent=gene-AB25_RS24165;Dbxref=GenBank:WP_000738723.1;Name=WP_000738723.1;gbkey=CDS;gene=yaaX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414546.1;locus_tag=AB25_RS24165;product=DUF2502 domain-containing protein;protein_id=WP_000738723.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 33659 34435 . - . ID=gene-AB25_RS24160;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=AB25_RS24160;old_locus_tag=AB25_0032 NZ_JJMC01000001.1 Protein Homology CDS 33659 34435 . - 0 ID=cds-WP_000906183.1;Parent=gene-AB25_RS24160;Dbxref=GenBank:WP_000906183.1;Name=WP_000906183.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308033.1;locus_tag=AB25_RS24160;product=peroxide stress protein YaaA;protein_id=WP_000906183.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 34505 35935 . - . ID=gene-AB25_RS24155;Name=yaaJ;gbkey=Gene;gene=yaaJ;gene_biotype=protein_coding;locus_tag=AB25_RS24155;old_locus_tag=AB25_0033 NZ_JJMC01000001.1 Protein Homology CDS 34505 35935 . - 0 ID=cds-WP_001112597.1;Parent=gene-AB25_RS24155;Dbxref=GenBank:WP_001112597.1;Name=WP_001112597.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;gene=yaaJ;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414548.1;locus_tag=AB25_RS24155;product=alanine/glycine:cation symporter family protein;protein_id=WP_001112597.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 36214 37167 . + . ID=gene-AB25_RS24150;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=AB25_RS24150;old_locus_tag=AB25_0034 NZ_JJMC01000001.1 Protein Homology CDS 36214 37167 . + 0 ID=cds-WP_000130185.1;Parent=gene-AB25_RS24150;Dbxref=GenBank:WP_000130185.1;Name=WP_000130185.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308035.1;locus_tag=AB25_RS24150;product=transaldolase;protein_id=WP_000130185.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 37282 37869 . + . ID=gene-AB25_RS24145;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=AB25_RS24145;old_locus_tag=AB25_0035 NZ_JJMC01000001.1 Protein Homology CDS 37282 37869 . + 0 ID=cds-WP_001094682.1;Parent=gene-AB25_RS24145;Dbxref=GenBank:WP_001094682.1;Name=WP_001094682.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308036.1;locus_tag=AB25_RS24145;product=molybdopterin adenylyltransferase;protein_id=WP_001094682.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 37904 38470 . - . ID=gene-AB25_RS24140;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;locus_tag=AB25_RS24140;old_locus_tag=AB25_0036 NZ_JJMC01000001.1 Protein Homology CDS 37904 38470 . - 0 ID=cds-WP_000528538.1;Parent=gene-AB25_RS24140;Dbxref=GenBank:WP_000528538.1;Name=WP_000528538.1;Ontology_term=GO:0016020;gbkey=CDS;gene=satP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308037.1;locus_tag=AB25_RS24140;product=acetate uptake transporter;protein_id=WP_000528538.1;transl_table=11 NZ_JJMC01000001.1 RefSeq pseudogene 38619 39331 . - . ID=gene-AB25_RS0124340;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=pseudogene;locus_tag=AB25_RS0124340;old_locus_tag=AB25_0038;pseudo=true NZ_JJMC01000001.1 Protein Homology CDS 38619 39331 . - 0 ID=cds-AB25_RS0124340;Parent=gene-AB25_RS0124340;Note=frameshifted;gbkey=CDS;gene=msyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414552.1;locus_tag=AB25_RS0124340;product=acidic protein MsyB;pseudo=true;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 39357 39761 . - . ID=gene-AB25_RS24135;Name=yaaI;gbkey=Gene;gene=yaaI;gene_biotype=protein_coding;locus_tag=AB25_RS24135;old_locus_tag=AB25_0039 NZ_JJMC01000001.1 Protein Homology CDS 39357 39761 . - 0 ID=cds-WP_000843559.1;Parent=gene-AB25_RS24135;Dbxref=GenBank:WP_000843559.1;Name=WP_000843559.1;gbkey=CDS;gene=yaaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_705972.1;locus_tag=AB25_RS24135;product=DUF2541 family protein;protein_id=WP_000843559.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 40138 42054 . + . ID=gene-AB25_RS24130;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=AB25_RS24130;old_locus_tag=AB25_0040 NZ_JJMC01000001.1 Protein Homology CDS 40138 42054 . + 0 ID=cds-WP_000516131.1;Parent=gene-AB25_RS24130;Dbxref=GenBank:WP_000516131.1;Name=WP_000516131.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=AB25_RS24130;product=molecular chaperone DnaK;protein_id=WP_000516131.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 42143 43273 . + . ID=gene-AB25_RS24125;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=AB25_RS24125;old_locus_tag=AB25_0041 NZ_JJMC01000001.1 Protein Homology CDS 42143 43273 . + 0 ID=cds-WP_001118464.1;Parent=gene-AB25_RS24125;Dbxref=GenBank:WP_001118464.1;Name=WP_001118464.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308042.1;locus_tag=AB25_RS24125;product=molecular chaperone DnaJ;protein_id=WP_001118464.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 43377 43529 . - . ID=gene-AB25_RS0124345;Name=mokC;gbkey=Gene;gene=mokC;gene_biotype=protein_coding;locus_tag=AB25_RS0124345 NZ_JJMC01000001.1 Protein Homology CDS 43377 43529 . - 0 ID=cds-WP_000809168.1;Parent=gene-AB25_RS0124345;Dbxref=GenBank:WP_000809168.1;Name=WP_000809168.1;gbkey=CDS;gene=mokC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025292.1;locus_tag=AB25_RS0124345;product=type I toxin-antitoxin system toxin MokC;protein_id=WP_000809168.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 44115 45281 . + . ID=gene-AB25_RS24120;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=AB25_RS24120;old_locus_tag=AB25_0042 NZ_JJMC01000001.1 Protein Homology CDS 44115 45281 . + 0 ID=cds-WP_000681360.1;Parent=gene-AB25_RS24120;Dbxref=GenBank:WP_000681360.1;Name=WP_000681360.1;Ontology_term=GO:0006814,GO:0006885,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaA;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308044.1;locus_tag=AB25_RS24120;product=Na+/H+ antiporter NhaA;protein_id=WP_000681360.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 45347 46246 . + . ID=gene-AB25_RS24115;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=AB25_RS24115;old_locus_tag=AB25_0043 NZ_JJMC01000001.1 Protein Homology CDS 45347 46246 . + 0 ID=cds-WP_001300855.1;Parent=gene-AB25_RS24115;Dbxref=GenBank:WP_001300855.1;Name=WP_001300855.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_705976.2;locus_tag=AB25_RS24115;product=transcriptional activator NhaR;protein_id=WP_001300855.1;transl_table=11 NZ_JJMC01000001.1 RefSeq pseudogene 46285 47243 . - . ID=gene-AB25_RS31575;Name=AB25_RS31575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS31575;old_locus_tag=AB25_0044;pseudo=true NZ_JJMC01000001.1 Protein Homology CDS 46285 47243 . - 0 ID=cds-AB25_RS31575;Parent=gene-AB25_RS31575;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000871680.1;locus_tag=AB25_RS31575;product=fimbrial family protein;pseudo=true;transl_table=11 NZ_JJMC01000001.1 RefSeq pseudogene 47256 48587 . - . ID=gene-AB25_RS0124360;Name=AB25_RS0124360;end_range=48587,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS0124360;partial=true;pseudo=true NZ_JJMC01000001.1 Protein Homology CDS 47256 48587 . - 0 ID=cds-AB25_RS0124360;Parent=gene-AB25_RS0124360;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009297,GO:0015473,GO:0016020;end_range=48587,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308049.1;locus_tag=AB25_RS0124360;partial=true;product=fimbria/pilus outer membrane usher protein;pseudo=true;transl_table=11 NZ_JJMC01000001.1 RefSeq pseudogene 48834 50254 . - . ID=gene-AB25_RS0124365;Name=espX1;gbkey=Gene;gene=espX1;gene_biotype=pseudogene;locus_tag=AB25_RS0124365;old_locus_tag=AB25_0048;pseudo=true NZ_JJMC01000001.1 Protein Homology CDS 48834 50254 . - 0 ID=cds-AB25_RS0124365;Parent=gene-AB25_RS0124365;Note=frameshifted;gbkey=CDS;gene=espX1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308052.1;locus_tag=AB25_RS0124365;product=type III secretion system effector EspX1;pseudo=true;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 50738 51001 . - . ID=gene-AB25_RS0124370;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=AB25_RS0124370;old_locus_tag=AB25_0049 NZ_JJMC01000001.1 Protein Homology CDS 50738 51001 . - 0 ID=cds-WP_001274021.1;Parent=gene-AB25_RS0124370;Dbxref=GenBank:WP_001274021.1;Name=WP_001274021.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117633.1;locus_tag=AB25_RS0124370;product=30S ribosomal protein S20;protein_id=WP_001274021.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 51104 51322 . + . ID=gene-AB25_RS0124375;Name=yaaY;gbkey=Gene;gene=yaaY;gene_biotype=protein_coding;locus_tag=AB25_RS0124375 NZ_JJMC01000001.1 Protein Homology CDS 51104 51322 . + 0 ID=cds-WP_001295417.1;Parent=gene-AB25_RS0124375;Dbxref=GenBank:WP_001295417.1;Name=WP_001295417.1;gbkey=CDS;gene=yaaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414565.1;locus_tag=AB25_RS0124375;product=DUF2575 family protein;protein_id=WP_001295417.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 51330 52271 . + . ID=gene-AB25_RS24110;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=AB25_RS24110;old_locus_tag=AB25_0050 NZ_JJMC01000001.1 Protein Homology CDS 51330 52271 . + 0 ID=cds-WP_000767329.1;Parent=gene-AB25_RS24110;Dbxref=GenBank:WP_000767329.1;Name=WP_000767329.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308055.1;locus_tag=AB25_RS24110;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_000767329.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 52314 55130 . + . ID=gene-AB25_RS24105;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=AB25_RS24105;old_locus_tag=AB25_0051 NZ_JJMC01000001.1 Protein Homology CDS 52314 55130 . + 0 ID=cds-WP_032170551.1;Parent=gene-AB25_RS24105;Dbxref=GenBank:WP_032170551.1;Name=WP_032170551.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124083.1;locus_tag=AB25_RS24105;product=isoleucine--tRNA ligase;protein_id=WP_032170551.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 55130 55624 . + . ID=gene-AB25_RS24100;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=AB25_RS24100;old_locus_tag=AB25_0052 NZ_JJMC01000001.1 Protein Homology CDS 55130 55624 . + 0 ID=cds-WP_000083369.1;Parent=gene-AB25_RS24100;Dbxref=GenBank:WP_000083369.1;Name=WP_000083369.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414568.1;locus_tag=AB25_RS24100;product=signal peptidase II;protein_id=WP_000083369.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 55749 56198 . + . ID=gene-AB25_RS24095;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;locus_tag=AB25_RS24095;old_locus_tag=AB25_0053 NZ_JJMC01000001.1 Protein Homology CDS 55749 56198 . + 0 ID=cds-WP_000004655.1;Parent=gene-AB25_RS24095;Dbxref=GenBank:WP_000004655.1;Name=WP_000004655.1;Ontology_term=GO:0003755;gbkey=CDS;gene=fkpB;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308058.1;locus_tag=AB25_RS24095;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000004655.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 56200 57150 . + . ID=gene-AB25_RS24090;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=AB25_RS24090;old_locus_tag=AB25_0054 NZ_JJMC01000001.1 Protein Homology CDS 56200 57150 . + 0 ID=cds-WP_001166404.1;Parent=gene-AB25_RS24090;Dbxref=GenBank:WP_001166404.1;Name=WP_001166404.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124087.1;locus_tag=AB25_RS24090;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_001166404.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 57216 58130 . + . ID=gene-AB25_RS24085;Name=rihC;gbkey=Gene;gene=rihC;gene_biotype=protein_coding;locus_tag=AB25_RS24085;old_locus_tag=AB25_0055 NZ_JJMC01000001.1 Protein Homology CDS 57216 58130 . + 0 ID=cds-WP_001239133.1;Parent=gene-AB25_RS24085;Dbxref=GenBank:WP_001239133.1;Name=WP_001239133.1;Ontology_term=GO:0016799;gbkey=CDS;gene=rihC;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414571.1;locus_tag=AB25_RS24085;product=ribonucleoside hydrolase RihC;protein_id=WP_001239133.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 58297 59118 . + . ID=gene-AB25_RS24080;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=AB25_RS24080;old_locus_tag=AB25_0056 NZ_JJMC01000001.1 Protein Homology CDS 58297 59118 . + 0 ID=cds-WP_000543597.1;Parent=gene-AB25_RS24080;Dbxref=GenBank:WP_000543597.1;Name=WP_000543597.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414572.1;locus_tag=AB25_RS24080;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_000543597.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 59574 60722 . + . ID=gene-AB25_RS24070;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=AB25_RS24070;old_locus_tag=AB25_0059 NZ_JJMC01000001.1 Protein Homology CDS 59574 60722 . + 0 ID=cds-WP_000597260.1;Parent=gene-AB25_RS24070;Dbxref=GenBank:WP_000597260.1;Name=WP_000597260.1;Ontology_term=GO:0006207,GO:0006541,GO:0004088;gbkey=CDS;gene=carA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308062.1;locus_tag=AB25_RS24070;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_000597260.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 60740 63961 . + . ID=gene-AB25_RS24065;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=AB25_RS24065;old_locus_tag=AB25_0060 NZ_JJMC01000001.1 Protein Homology CDS 60740 63961 . + 0 ID=cds-WP_001126376.1;Parent=gene-AB25_RS24065;Dbxref=GenBank:WP_001126376.1;Name=WP_001126376.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308063.1;locus_tag=AB25_RS24065;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_001126376.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 64222 64617 . + . ID=gene-AB25_RS24055;Name=caiF;gbkey=Gene;gene=caiF;gene_biotype=protein_coding;locus_tag=AB25_RS24055;old_locus_tag=AB25_0062 NZ_JJMC01000001.1 Protein Homology CDS 64222 64617 . + 0 ID=cds-WP_032170553.1;Parent=gene-AB25_RS24055;Dbxref=GenBank:WP_032170553.1;Name=WP_032170553.1;gbkey=CDS;gene=caiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414576.4;locus_tag=AB25_RS24055;product=carnitine metabolism transcriptional regulator CaiF;protein_id=WP_032170553.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 64703 65293 . - . ID=gene-AB25_RS24050;Name=caiE;gbkey=Gene;gene=caiE;gene_biotype=protein_coding;locus_tag=AB25_RS24050;old_locus_tag=AB25_0063 NZ_JJMC01000001.1 Protein Homology CDS 64703 65293 . - 0 ID=cds-WP_000122876.1;Parent=gene-AB25_RS24050;Dbxref=GenBank:WP_000122876.1;Name=WP_000122876.1;gbkey=CDS;gene=caiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308065.2;locus_tag=AB25_RS24050;product=carnitine operon protein CaiE;protein_id=WP_000122876.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 65299 66084 . - . ID=gene-AB25_RS24045;Name=caiD;gbkey=Gene;gene=caiD;gene_biotype=protein_coding;locus_tag=AB25_RS24045;old_locus_tag=AB25_0064 NZ_JJMC01000001.1 Protein Homology CDS 65299 66084 . - 0 ID=cds-WP_000004404.1;Parent=gene-AB25_RS24045;Dbxref=GenBank:WP_000004404.1;Name=WP_000004404.1;Ontology_term=GO:0016836;gbkey=CDS;gene=caiD;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414578.2;locus_tag=AB25_RS24045;product=crotonobetainyl-CoA hydratase;protein_id=WP_000004404.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 66193 67746 . - . ID=gene-AB25_RS24040;Name=caiC;gbkey=Gene;gene=caiC;gene_biotype=protein_coding;locus_tag=AB25_RS24040;old_locus_tag=AB25_0065 NZ_JJMC01000001.1 Protein Homology CDS 66193 67746 . - 0 ID=cds-WP_000351348.1;Parent=gene-AB25_RS24040;Dbxref=GenBank:WP_000351348.1;Name=WP_000351348.1;Ontology_term=GO:0009437,GO:0016405;gbkey=CDS;gene=caiC;go_function=CoA-ligase activity|0016405||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308067.2;locus_tag=AB25_RS24040;product=crotonobetaine/carnitine-CoA ligase;protein_id=WP_000351348.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 67820 69037 . - . ID=gene-AB25_RS24035;Name=caiB;gbkey=Gene;gene=caiB;gene_biotype=protein_coding;locus_tag=AB25_RS24035;old_locus_tag=AB25_0066 NZ_JJMC01000001.1 Protein Homology CDS 67820 69037 . - 0 ID=cds-WP_032173347.1;Parent=gene-AB25_RS24035;Dbxref=GenBank:WP_032173347.1;Name=WP_032173347.1;Ontology_term=GO:0009437,GO:0016782;gbkey=CDS;gene=caiB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308068.1;locus_tag=AB25_RS24035;product=L-carnitine CoA-transferase;protein_id=WP_032173347.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 69166 70308 . - . ID=gene-AB25_RS24030;Name=caiA;gbkey=Gene;gene=caiA;gene_biotype=protein_coding;locus_tag=AB25_RS24030;old_locus_tag=AB25_0067 NZ_JJMC01000001.1 Protein Homology CDS 69166 70308 . - 0 ID=cds-WP_001381342.1;Parent=gene-AB25_RS24030;Dbxref=GenBank:WP_001381342.1;Name=WP_001381342.1;Ontology_term=GO:0009437,GO:0003995,GO:0016627;gbkey=CDS;gene=caiA;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124373.1;locus_tag=AB25_RS24030;product=crotonobetainyl-CoA dehydrogenase;protein_id=WP_001381342.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 70339 71853 . - . ID=gene-AB25_RS24025;Name=caiT;gbkey=Gene;gene=caiT;gene_biotype=protein_coding;locus_tag=AB25_RS24025;old_locus_tag=AB25_0068 NZ_JJMC01000001.1 Protein Homology CDS 70339 71853 . - 0 ID=cds-WP_000787103.1;Parent=gene-AB25_RS24025;Dbxref=GenBank:WP_000787103.1;Name=WP_000787103.1;gbkey=CDS;gene=caiT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414582.1;locus_tag=AB25_RS24025;product=L-carnitine/gamma-butyrobetaine antiporter;protein_id=WP_000787103.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 72327 73097 . + . ID=gene-AB25_RS24020;Name=fixA;gbkey=Gene;gene=fixA;gene_biotype=protein_coding;locus_tag=AB25_RS24020;old_locus_tag=AB25_0069 NZ_JJMC01000001.1 Protein Homology CDS 72327 73097 . + 0 ID=cds-WP_000692204.1;Parent=gene-AB25_RS24020;Dbxref=GenBank:WP_000692204.1;Name=WP_000692204.1;gbkey=CDS;gene=fixA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414583.2;locus_tag=AB25_RS24020;product=electron transfer flavoprotein FixA;protein_id=WP_000692204.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 73112 74053 . + . ID=gene-AB25_RS24015;Name=fixB;gbkey=Gene;gene=fixB;gene_biotype=protein_coding;locus_tag=AB25_RS24015;old_locus_tag=AB25_0070 NZ_JJMC01000001.1 Protein Homology CDS 73112 74053 . + 0 ID=cds-WP_001091506.1;Parent=gene-AB25_RS24015;Dbxref=GenBank:WP_001091506.1;Name=WP_001091506.1;gbkey=CDS;gene=fixB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308072.1;locus_tag=AB25_RS24015;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_001091506.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 74104 75390 . + . ID=gene-AB25_RS24010;Name=fixC;gbkey=Gene;gene=fixC;gene_biotype=protein_coding;locus_tag=AB25_RS24010;old_locus_tag=AB25_0071 NZ_JJMC01000001.1 Protein Homology CDS 74104 75390 . + 0 ID=cds-WP_001287715.1;Parent=gene-AB25_RS24010;Dbxref=GenBank:WP_001287715.1;Name=WP_001287715.1;gbkey=CDS;gene=fixC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414585.1;locus_tag=AB25_RS24010;product=FAD-dependent oxidoreductase;protein_id=WP_001287715.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 75387 75674 . + . ID=gene-AB25_RS24005;Name=fixX;gbkey=Gene;gene=fixX;gene_biotype=protein_coding;locus_tag=AB25_RS24005;old_locus_tag=AB25_0072 NZ_JJMC01000001.1 Protein Homology CDS 75387 75674 . + 0 ID=cds-WP_000203747.1;Parent=gene-AB25_RS24005;Dbxref=GenBank:WP_000203747.1;Name=WP_000203747.1;gbkey=CDS;gene=fixX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706000.1;locus_tag=AB25_RS24005;product=ferredoxin-like protein FixX;protein_id=WP_000203747.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 75732 77063 . + . ID=gene-AB25_RS24000;Name=yaaU;gbkey=Gene;gene=yaaU;gene_biotype=protein_coding;locus_tag=AB25_RS24000;old_locus_tag=AB25_0073 NZ_JJMC01000001.1 Protein Homology CDS 75732 77063 . + 0 ID=cds-WP_001183198.1;Parent=gene-AB25_RS24000;Dbxref=GenBank:WP_001183198.1;Name=WP_001183198.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yaaU;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414587.1;locus_tag=AB25_RS24000;product=MFS transporter;protein_id=WP_001183198.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 77171 77701 . + . ID=gene-AB25_RS23995;Name=kefF;gbkey=Gene;gene=kefF;gene_biotype=protein_coding;locus_tag=AB25_RS23995;old_locus_tag=AB25_0074 NZ_JJMC01000001.1 Protein Homology CDS 77171 77701 . + 0 ID=cds-WP_000600725.1;Parent=gene-AB25_RS23995;Dbxref=GenBank:WP_000600725.1;Name=WP_000600725.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefF;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414588.1;locus_tag=AB25_RS23995;product=glutathione-regulated potassium-efflux system oxidoreductase KefF;protein_id=WP_000600725.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 77694 79556 . + . ID=gene-AB25_RS23990;Name=kefC;gbkey=Gene;gene=kefC;gene_biotype=protein_coding;locus_tag=AB25_RS23990;old_locus_tag=AB25_0075 NZ_JJMC01000001.1 Protein Homology CDS 77694 79556 . + 0 ID=cds-WP_000377129.1;Parent=gene-AB25_RS23990;Dbxref=GenBank:WP_000377129.1;Name=WP_000377129.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefC;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414589.1;locus_tag=AB25_RS23990;product=glutathione-regulated potassium-efflux system protein KefC;protein_id=WP_000377129.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 79748 80227 . + . ID=gene-AB25_RS23985;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=AB25_RS23985;old_locus_tag=AB25_0076 NZ_JJMC01000001.1 Protein Homology CDS 79748 80227 . + 0 ID=cds-WP_000624375.1;Parent=gene-AB25_RS23985;Dbxref=GenBank:WP_000624375.1;Name=WP_000624375.1;Ontology_term=GO:0046654,GO:0004146;gbkey=CDS;gene=folA;go_function=dihydrofolate reductase activity|0004146||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456510.1;locus_tag=AB25_RS23985;product=type 3 dihydrofolate reductase;protein_id=WP_000624375.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 80305 81147 . - . ID=gene-AB25_RS23980;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=AB25_RS23980;old_locus_tag=AB25_0077 NZ_JJMC01000001.1 Protein Homology CDS 80305 81147 . - 0 ID=cds-WP_000257192.1;Parent=gene-AB25_RS23980;Dbxref=GenBank:WP_000257192.1;Name=WP_000257192.1;Ontology_term=GO:0008803;gbkey=CDS;gene=apaH;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414591.1;locus_tag=AB25_RS23980;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;protein_id=WP_000257192.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 81154 81531 . - . ID=gene-AB25_RS23975;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=AB25_RS23975;old_locus_tag=AB25_0078 NZ_JJMC01000001.1 Protein Homology CDS 81154 81531 . - 0 ID=cds-WP_000610901.1;Parent=gene-AB25_RS23975;Dbxref=GenBank:WP_000610901.1;Name=WP_000610901.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308082.1;locus_tag=AB25_RS23975;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WP_000610901.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 81534 82355 . - . ID=gene-AB25_RS23970;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=AB25_RS23970;old_locus_tag=AB25_0079 NZ_JJMC01000001.1 Protein Homology CDS 81534 82355 . - 0 ID=cds-WP_001065381.1;Parent=gene-AB25_RS23970;Dbxref=GenBank:WP_001065381.1;Name=WP_001065381.1;Ontology_term=GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414593.1;locus_tag=AB25_RS23970;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_001065381.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 82352 83341 . - . ID=gene-AB25_RS23965;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=AB25_RS23965;old_locus_tag=AB25_0080 NZ_JJMC01000001.1 Protein Homology CDS 82352 83341 . - 0 ID=cds-WP_000241271.1;Parent=gene-AB25_RS23965;Dbxref=GenBank:WP_000241271.1;Name=WP_000241271.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308084.1;locus_tag=AB25_RS23965;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_000241271.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 83341 84627 . - . ID=gene-AB25_RS23960;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=AB25_RS23960;old_locus_tag=AB25_0081 NZ_JJMC01000001.1 Protein Homology CDS 83341 84627 . - 0 ID=cds-WP_000800453.1;Parent=gene-AB25_RS23960;Dbxref=GenBank:WP_000800453.1;Name=WP_000800453.1;Ontology_term=GO:0006457,GO:0043165,GO:0050821,GO:0060274,GO:0003755,GO:0042277,GO:0051082,GO:0030288;gbkey=CDS;gene=surA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,peptide binding|0042277||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA,protein stabilization|0050821||IEA,maintenance of stationary phase|0060274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308085.1;locus_tag=AB25_RS23960;product=peptidylprolyl isomerase SurA;protein_id=WP_000800453.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 84680 87034 . - . ID=gene-AB25_RS23955;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=AB25_RS23955;old_locus_tag=AB25_0082 NZ_JJMC01000001.1 Protein Homology CDS 84680 87034 . - 0 ID=cds-WP_000746150.1;Parent=gene-AB25_RS23955;Dbxref=GenBank:WP_000746150.1;Name=WP_000746150.1;Ontology_term=GO:0015920,GO:0043165,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414596.1;locus_tag=AB25_RS23955;product=LPS assembly protein LptD;protein_id=WP_000746150.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 87289 88104 . + . ID=gene-AB25_RS23950;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=AB25_RS23950;old_locus_tag=AB25_0083 NZ_JJMC01000001.1 Protein Homology CDS 87289 88104 . + 0 ID=cds-WP_001200579.1;Parent=gene-AB25_RS23950;Dbxref=GenBank:WP_001200579.1;Name=WP_001200579.1;Ontology_term=GO:0051087;gbkey=CDS;gene=djlA;go_function=protein-folding chaperone binding|0051087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414597.1;locus_tag=AB25_RS23950;product=co-chaperone DjlA;protein_id=WP_001200579.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 88221 88880 . - . ID=gene-AB25_RS23945;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=AB25_RS23945;old_locus_tag=AB25_0084 NZ_JJMC01000001.1 Protein Homology CDS 88221 88880 . - 0 ID=cds-WP_000525176.1;Parent=gene-AB25_RS23945;Dbxref=GenBank:WP_000525176.1;Name=WP_000525176.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414600.1;locus_tag=AB25_RS23945;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=WP_000525176.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 88892 91798 . - . ID=gene-AB25_RS23940;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=AB25_RS23940;old_locus_tag=AB25_0085 NZ_JJMC01000001.1 Protein Homology CDS 88892 91798 . - 0 ID=cds-WP_032173349.1;Parent=gene-AB25_RS23940;Dbxref=GenBank:WP_032173349.1;Name=WP_032173349.1;Ontology_term=GO:0006355,GO:0005524,GO:0016817,GO:0140658;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides|0016817||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1;locus_tag=AB25_RS23940;product=RNA polymerase-associated protein RapA;protein_id=WP_032173349.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 91963 94314 . - . ID=gene-AB25_RS23935;Name=polB;gbkey=Gene;gene=polB;gene_biotype=protein_coding;locus_tag=AB25_RS23935;old_locus_tag=AB25_0086 NZ_JJMC01000001.1 Protein Homology CDS 91963 94314 . - 0 ID=cds-WP_032178025.1;Parent=gene-AB25_RS23935;Dbxref=GenBank:WP_032178025.1;Name=WP_032178025.1;Ontology_term=GO:0003677,GO:0003887;gbkey=CDS;gene=polB;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414602.1;locus_tag=AB25_RS23935;product=DNA polymerase II;protein_id=WP_032178025.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 94389 95084 . - . ID=gene-AB25_RS23930;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=AB25_RS23930;old_locus_tag=AB25_0087 NZ_JJMC01000001.1 Protein Homology CDS 94389 95084 . - 0 ID=cds-WP_000888642.1;Parent=gene-AB25_RS23930;Dbxref=GenBank:WP_000888642.1;Name=WP_000888642.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414603.1;locus_tag=AB25_RS23930;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_000888642.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 95284 96786 . - . ID=gene-AB25_RS23925;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=AB25_RS23925;old_locus_tag=AB25_0088 NZ_JJMC01000001.1 Protein Homology CDS 95284 96786 . - 0 ID=cds-WP_000151734.1;Parent=gene-AB25_RS23925;Dbxref=GenBank:WP_000151734.1;Name=WP_000151734.1;Ontology_term=GO:0005996,GO:0008733;gbkey=CDS;gene=araA;go_function=L-arabinose isomerase activity|0008733||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308093.1;locus_tag=AB25_RS23925;product=L-arabinose isomerase;protein_id=WP_000151734.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 96797 98497 . - . ID=gene-AB25_RS23920;Name=araB;gbkey=Gene;gene=araB;gene_biotype=protein_coding;locus_tag=AB25_RS23920;old_locus_tag=AB25_0089 NZ_JJMC01000001.1 Protein Homology CDS 96797 98497 . - 0 ID=cds-WP_000951786.1;Parent=gene-AB25_RS23920;Dbxref=GenBank:WP_000951786.1;Name=WP_000951786.1;Ontology_term=GO:0019568,GO:0005524,GO:0008741;gbkey=CDS;gene=araB;go_function=ATP binding|0005524||IEA,ribulokinase activity|0008741||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414605.1;locus_tag=AB25_RS23920;product=ribulokinase;protein_id=WP_000951786.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 98836 99714 . + . ID=gene-AB25_RS23915;Name=araC;gbkey=Gene;gene=araC;gene_biotype=protein_coding;locus_tag=AB25_RS23915;old_locus_tag=AB25_0090 NZ_JJMC01000001.1 Protein Homology CDS 98836 99714 . + 0 ID=cds-WP_001300811.1;Parent=gene-AB25_RS23915;Dbxref=GenBank:WP_001300811.1;Name=WP_001300811.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=araC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308095.1;locus_tag=AB25_RS23915;product=arabinose operon transcriptional regulator AraC;protein_id=WP_001300811.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 99800 100564 . + . ID=gene-AB25_RS23910;Name=yabI;gbkey=Gene;gene=yabI;gene_biotype=protein_coding;locus_tag=AB25_RS23910;old_locus_tag=AB25_0091 NZ_JJMC01000001.1 Protein Homology CDS 99800 100564 . + 0 ID=cds-WP_001148402.1;Parent=gene-AB25_RS23910;Dbxref=GenBank:WP_001148402.1;Name=WP_001148402.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yabI;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001148402.1;locus_tag=AB25_RS23910;product=DedA family protein;protein_id=WP_001148402.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 100678 101376 . - . ID=gene-AB25_RS23905;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=AB25_RS23905;old_locus_tag=AB25_0092 NZ_JJMC01000001.1 Protein Homology CDS 100678 101376 . - 0 ID=cds-WP_000916291.1;Parent=gene-AB25_RS23905;Dbxref=GenBank:WP_000916291.1;Name=WP_000916291.1;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308097.1;locus_tag=AB25_RS23905;product=thiamine ABC transporter ATP-binding protein ThiQ;protein_id=WP_000916291.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 101360 102970 . - . ID=gene-AB25_RS23900;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=AB25_RS23900;old_locus_tag=AB25_0093 NZ_JJMC01000001.1 Protein Homology CDS 101360 102970 . - 0 ID=cds-WP_000235700.1;Parent=gene-AB25_RS23900;Dbxref=GenBank:WP_000235700.1;Name=WP_000235700.1;gbkey=CDS;gene=thiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706020.1;locus_tag=AB25_RS23900;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=WP_000235700.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 102946 103929 . - . ID=gene-AB25_RS23895;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=AB25_RS23895;old_locus_tag=AB25_0094 NZ_JJMC01000001.1 Protein Homology CDS 102946 103929 . - 0 ID=cds-WP_001295536.1;Parent=gene-AB25_RS23895;Dbxref=GenBank:WP_001295536.1;Name=WP_001295536.1;Ontology_term=GO:0015888,GO:0030975,GO:0048502,GO:0030288,GO:0055052;gbkey=CDS;gene=thiB;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=thiamine binding|0030975||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706021.2;locus_tag=AB25_RS23895;product=thiamine ABC transporter substrate binding subunit;protein_id=WP_001295536.1;transl_table=11 NZ_JJMC01000001.1 cmsearch riboswitch 103960 104059 . - . ID=id-NZ_JJMC01000001.1:103960..104059;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JJMC01000001.1 RefSeq gene 104093 105748 . - . ID=gene-AB25_RS23890;Name=sgrR;gbkey=Gene;gene=sgrR;gene_biotype=protein_coding;locus_tag=AB25_RS23890;old_locus_tag=AB25_0096 NZ_JJMC01000001.1 Protein Homology CDS 104093 105748 . - 0 ID=cds-WP_001297366.1;Parent=gene-AB25_RS23890;Dbxref=GenBank:WP_001297366.1;Name=WP_001297366.1;gbkey=CDS;gene=sgrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706022.2;locus_tag=AB25_RS23890;product=DNA-binding transcriptional regulator SgrR;protein_id=WP_001297366.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 105837 105968 . + . ID=gene-AB25_RS23885;Name=sgrT;gbkey=Gene;gene=sgrT;gene_biotype=protein_coding;locus_tag=AB25_RS23885;old_locus_tag=AB25_0097 NZ_JJMC01000001.1 Protein Homology CDS 105837 105968 . + 0 ID=cds-WP_001248770.1;Parent=gene-AB25_RS23885;Dbxref=GenBank:WP_001248770.1;Name=WP_001248770.1;Ontology_term=GO:0046325;gbkey=CDS;gene=sgrT;go_process=negative regulation of D-glucose import|0046325||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791237.1;locus_tag=AB25_RS23885;product=glucose uptake inhibitor SgrT;protein_id=WP_001248770.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 106070 107248 . + . ID=gene-AB25_RS23880;Name=setA;gbkey=Gene;gene=setA;gene_biotype=protein_coding;locus_tag=AB25_RS23880;old_locus_tag=AB25_0098 NZ_JJMC01000001.1 Protein Homology CDS 106070 107248 . + 0 ID=cds-WP_000637846.1;Parent=gene-AB25_RS23880;Dbxref=GenBank:WP_000637846.1;Name=WP_000637846.1;gbkey=CDS;gene=setA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025293.1;locus_tag=AB25_RS23880;product=sugar efflux transporter SetA;protein_id=WP_000637846.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 107297 107902 . - . ID=gene-AB25_RS23875;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=AB25_RS23875;old_locus_tag=AB25_0099 NZ_JJMC01000001.1 Protein Homology CDS 107297 107902 . - 0 ID=cds-WP_001390976.1;Parent=gene-AB25_RS23875;Dbxref=GenBank:WP_001390976.1;Name=WP_001390976.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414613.1;locus_tag=AB25_RS23875;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_001390976.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 107913 109313 . - . ID=gene-AB25_RS23870;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=AB25_RS23870;old_locus_tag=AB25_0100 NZ_JJMC01000001.1 Protein Homology CDS 107913 109313 . - 0 ID=cds-WP_001140652.1;Parent=gene-AB25_RS23870;Dbxref=GenBank:WP_001140652.1;Name=WP_001140652.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414614.1;locus_tag=AB25_RS23870;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_001140652.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 109316 110407 . - . ID=gene-AB25_RS23865;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=AB25_RS23865;old_locus_tag=AB25_0101 NZ_JJMC01000001.1 Protein Homology CDS 109316 110407 . - 0 ID=cds-WP_032170555.1;Parent=gene-AB25_RS23865;Dbxref=GenBank:WP_032170555.1;Name=WP_032170555.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124544.1;locus_tag=AB25_RS23865;product=3-isopropylmalate dehydrogenase;protein_id=WP_032170555.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 110407 111978 . - . ID=gene-AB25_RS23860;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=AB25_RS23860;old_locus_tag=AB25_0102 NZ_JJMC01000001.1 Protein Homology CDS 110407 111978 . - 0 ID=cds-WP_000082846.1;Parent=gene-AB25_RS23860;Dbxref=GenBank:WP_000082846.1;Name=WP_000082846.1;Ontology_term=GO:0019752,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831521.1;locus_tag=AB25_RS23860;product=2-isopropylmalate synthase;protein_id=WP_000082846.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 112071 112157 . - . ID=gene-AB25_RS0124385;Name=leuL;gbkey=Gene;gene=leuL;gene_biotype=protein_coding;locus_tag=AB25_RS0124385 NZ_JJMC01000001.1 Protein Homology CDS 112071 112157 . - 0 ID=cds-WP_001300467.1;Parent=gene-AB25_RS0124385;Dbxref=GenBank:WP_001300467.1;Name=WP_001300467.1;gbkey=CDS;gene=leuL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308106.1;locus_tag=AB25_RS0124385;product=leu operon leader peptide;protein_id=WP_001300467.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 112817 113761 . + . ID=gene-AB25_RS23855;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=AB25_RS23855;old_locus_tag=AB25_0104 NZ_JJMC01000001.1 Protein Homology CDS 112817 113761 . + 0 ID=cds-WP_001297362.1;Parent=gene-AB25_RS23855;Dbxref=GenBank:WP_001297362.1;Name=WP_001297362.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=leuO;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414618.4;locus_tag=AB25_RS23855;product=transcriptional regulator LeuO;protein_id=WP_001297362.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 113916 113960 . - . ID=gene-AB25_RS31915;Name=AB25_RS31915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31915 NZ_JJMC01000001.1 Protein Homology CDS 113916 113960 . - 0 ID=cds-WP_128566915.1;Parent=gene-AB25_RS31915;Dbxref=GenBank:WP_128566915.1;Name=WP_128566915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518736.1;locus_tag=AB25_RS31915;product=hypothetical protein;protein_id=WP_128566915.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 114079 115803 . + . ID=gene-AB25_RS23850;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=AB25_RS23850;old_locus_tag=AB25_0107 NZ_JJMC01000001.1 Protein Homology CDS 114079 115803 . + 0 ID=cds-WP_000425657.1;Parent=gene-AB25_RS23850;Dbxref=GenBank:WP_000425657.1;Name=WP_000425657.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvI;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079613.1;locus_tag=AB25_RS23850;product=acetolactate synthase 3 large subunit;protein_id=WP_000425657.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 115806 116297 . + . ID=gene-AB25_RS23845;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=AB25_RS23845;old_locus_tag=AB25_0108 NZ_JJMC01000001.1 Protein Homology CDS 115806 116297 . + 0 ID=cds-WP_001252744.1;Parent=gene-AB25_RS23845;Dbxref=GenBank:WP_001252744.1;Name=WP_001252744.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563086.1;locus_tag=AB25_RS23845;product=acetolactate synthase small subunit;protein_id=WP_001252744.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 116309 116395 . + . ID=gene-AB25_RS0124390;Name=AB25_RS0124390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0124390 NZ_JJMC01000001.1 Protein Homology CDS 116309 116395 . + 0 ID=cds-WP_001303787.1;Parent=gene-AB25_RS0124390;Dbxref=GenBank:WP_001303787.1;Name=WP_001303787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308110.1;locus_tag=AB25_RS0124390;product=fruR/shl operon leader peptide;protein_id=WP_001303787.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 116477 117481 . + . ID=gene-AB25_RS23840;Name=cra;gbkey=Gene;gene=cra;gene_biotype=protein_coding;locus_tag=AB25_RS23840;old_locus_tag=AB25_0109 NZ_JJMC01000001.1 Protein Homology CDS 116477 117481 . + 0 ID=cds-WP_000762401.1;Parent=gene-AB25_RS23840;Dbxref=GenBank:WP_000762401.1;Name=WP_000762401.1;Ontology_term=GO:0006355,GO:0009750,GO:0003677;gbkey=CDS;gene=cra;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to fructose|0009750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308111.1;locus_tag=AB25_RS23840;product=catabolite repressor/activator;protein_id=WP_000762401.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 118083 118541 . + . ID=gene-AB25_RS23835;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=AB25_RS23835;old_locus_tag=AB25_0111 NZ_JJMC01000001.1 Protein Homology CDS 118083 118541 . + 0 ID=cds-WP_001295770.1;Parent=gene-AB25_RS23835;Dbxref=GenBank:WP_001295770.1;Name=WP_001295770.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020325403.1;locus_tag=AB25_RS23835;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_001295770.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 118543 119484 . + . ID=gene-AB25_RS23830;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=AB25_RS23830;old_locus_tag=AB25_0112 NZ_JJMC01000001.1 Protein Homology CDS 118543 119484 . + 0 ID=cds-WP_000970479.1;Parent=gene-AB25_RS23830;Dbxref=GenBank:WP_000970479.1;Name=WP_000970479.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124563.1;locus_tag=AB25_RS23830;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_000970479.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 119481 119846 . + . ID=gene-AB25_RS23825;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=AB25_RS23825;old_locus_tag=AB25_0113 NZ_JJMC01000001.1 Protein Homology CDS 119481 119846 . + 0 ID=cds-WP_024169351.1;Parent=gene-AB25_RS23825;Dbxref=GenBank:WP_024169351.1;Name=WP_024169351.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625658.1;locus_tag=AB25_RS23825;product=cell division protein FtsL;protein_id=WP_024169351.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 119862 121628 . + . ID=gene-AB25_RS23820;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=AB25_RS23820;old_locus_tag=AB25_0114 NZ_JJMC01000001.1 Protein Homology CDS 119862 121628 . + 0 ID=cds-WP_000642196.1;Parent=gene-AB25_RS23820;Dbxref=GenBank:WP_000642196.1;Name=WP_000642196.1;gbkey=CDS;gene=ftsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642204.1;locus_tag=AB25_RS23820;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_000642196.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 121615 123102 . + . ID=gene-AB25_RS23815;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=AB25_RS23815;old_locus_tag=AB25_0115 NZ_JJMC01000001.1 Protein Homology CDS 121615 123102 . + 0 ID=cds-WP_000785152.1;Parent=gene-AB25_RS23815;Dbxref=GenBank:WP_000785152.1;Name=WP_000785152.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308116.1;locus_tag=AB25_RS23815;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_000785152.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 123099 124457 . + . ID=gene-AB25_RS23810;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=AB25_RS23810;old_locus_tag=AB25_0116 NZ_JJMC01000001.1 Protein Homology CDS 123099 124457 . + 0 ID=cds-WP_000626688.1;Parent=gene-AB25_RS23810;Dbxref=GenBank:WP_000626688.1;Name=WP_000626688.1;Ontology_term=GO:0009058,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=biosynthetic process|0009058||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414628.1;locus_tag=AB25_RS23810;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_000626688.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 124451 125533 . + . ID=gene-AB25_RS23805;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=AB25_RS23805;old_locus_tag=AB25_0117 NZ_JJMC01000001.1 Protein Homology CDS 124451 125533 . + 0 ID=cds-WP_000964131.1;Parent=gene-AB25_RS23805;Dbxref=GenBank:WP_000964131.1;Name=WP_000964131.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=AB25_RS23805;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_000964131.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 125536 126852 . + . ID=gene-AB25_RS23800;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=AB25_RS23800;old_locus_tag=AB25_0118 NZ_JJMC01000001.1 Protein Homology CDS 125536 126852 . + 0 ID=cds-WP_000796480.1;Parent=gene-AB25_RS23800;Dbxref=GenBank:WP_000796480.1;Name=WP_000796480.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124612.1;locus_tag=AB25_RS23800;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_000796480.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 126852 128096 . + . ID=gene-AB25_RS23795;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=AB25_RS23795;old_locus_tag=AB25_0119 NZ_JJMC01000001.1 Protein Homology CDS 126852 128096 . + 0 ID=cds-WP_001295532.1;Parent=gene-AB25_RS23795;Dbxref=GenBank:WP_001295532.1;Name=WP_001295532.1;Ontology_term=GO:0051301;gbkey=CDS;gene=ftsW;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308120.1;locus_tag=AB25_RS23795;product=cell division protein FtsW;protein_id=WP_001295532.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 128093 129160 . + . ID=gene-AB25_RS23790;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=AB25_RS23790;old_locus_tag=AB25_0120 NZ_JJMC01000001.1 Protein Homology CDS 128093 129160 . + 0 ID=cds-WP_000016559.1;Parent=gene-AB25_RS23790;Dbxref=GenBank:WP_000016559.1;Name=WP_000016559.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308121.1;locus_tag=AB25_RS23790;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_000016559.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 129214 130689 . + . ID=gene-AB25_RS23785;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=AB25_RS23785;old_locus_tag=AB25_0121 NZ_JJMC01000001.1 Protein Homology CDS 129214 130689 . + 0 ID=cds-WP_001096049.1;Parent=gene-AB25_RS23785;Dbxref=GenBank:WP_001096049.1;Name=WP_001096049.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414633.1;locus_tag=AB25_RS23785;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_001096049.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 130682 131602 . + . ID=gene-AB25_RS23780;Name=ddlB;gbkey=Gene;gene=ddlB;gene_biotype=protein_coding;locus_tag=AB25_RS23780;old_locus_tag=AB25_0122 NZ_JJMC01000001.1 Protein Homology CDS 130682 131602 . + 0 ID=cds-WP_000130056.1;Parent=gene-AB25_RS23780;Dbxref=GenBank:WP_000130056.1;Name=WP_000130056.1;gbkey=CDS;gene=ddlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414634.1;locus_tag=AB25_RS23780;product=D-alanine--D-alanine ligase;protein_id=WP_000130056.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 131604 132434 . + . ID=gene-AB25_RS23775;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=AB25_RS23775;old_locus_tag=AB25_0123 NZ_JJMC01000001.1 Protein Homology CDS 131604 132434 . + 0 ID=cds-WP_000075748.1;Parent=gene-AB25_RS23775;Dbxref=GenBank:WP_000075748.1;Name=WP_000075748.1;Ontology_term=GO:0090529;gbkey=CDS;gene=ftsQ;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414635.1;locus_tag=AB25_RS23775;product=cell division protein FtsQ;protein_id=WP_000075748.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 132431 133693 . + . ID=gene-AB25_RS23770;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=AB25_RS23770;old_locus_tag=AB25_0124 NZ_JJMC01000001.1 Protein Homology CDS 132431 133693 . + 0 ID=cds-WP_000588474.1;Parent=gene-AB25_RS23770;Dbxref=GenBank:WP_000588474.1;Name=WP_000588474.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308125.1;locus_tag=AB25_RS23770;product=cell division protein FtsA;protein_id=WP_000588474.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 133754 134905 . + . ID=gene-AB25_RS23765;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=AB25_RS23765;old_locus_tag=AB25_0125 NZ_JJMC01000001.1 Protein Homology CDS 133754 134905 . + 0 ID=cds-WP_000462776.1;Parent=gene-AB25_RS23765;Dbxref=GenBank:WP_000462776.1;Name=WP_000462776.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=AB25_RS23765;product=cell division protein FtsZ;protein_id=WP_000462776.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 135006 135923 . + . ID=gene-AB25_RS23760;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=AB25_RS23760;old_locus_tag=AB25_0126 NZ_JJMC01000001.1 Protein Homology CDS 135006 135923 . + 0 ID=cds-WP_000595482.1;Parent=gene-AB25_RS23760;Dbxref=GenBank:WP_000595482.1;Name=WP_000595482.1;Ontology_term=GO:0009245,GO:0103117;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-acyl-N-acetylglucosamine deacetylase activity|0103117||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308127.1;locus_tag=AB25_RS23760;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_000595482.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 136154 136666 . + . ID=gene-AB25_RS23755;Name=secM;gbkey=Gene;gene=secM;gene_biotype=protein_coding;locus_tag=AB25_RS23755;old_locus_tag=AB25_0127 NZ_JJMC01000001.1 Protein Homology CDS 136154 136666 . + 0 ID=cds-WP_000014321.1;Parent=gene-AB25_RS23755;Dbxref=GenBank:WP_000014321.1;Name=WP_000014321.1;Ontology_term=GO:0045182;gbkey=CDS;gene=secM;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414639.2;locus_tag=AB25_RS23755;product=secA translation cis-regulator SecM;protein_id=WP_000014321.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 136728 139433 . + . ID=gene-AB25_RS23750;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=AB25_RS23750;old_locus_tag=AB25_0128 NZ_JJMC01000001.1 Protein Homology CDS 136728 139433 . + 0 ID=cds-WP_000905780.1;Parent=gene-AB25_RS23750;Dbxref=GenBank:WP_000905780.1;Name=WP_000905780.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308129.1;locus_tag=AB25_RS23750;product=preprotein translocase subunit SecA;protein_id=WP_000905780.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 139493 139882 . + . ID=gene-AB25_RS23745;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=AB25_RS23745;old_locus_tag=AB25_0129 NZ_JJMC01000001.1 Protein Homology CDS 139493 139882 . + 0 ID=cds-WP_000736009.1;Parent=gene-AB25_RS23745;Dbxref=GenBank:WP_000736009.1;Name=WP_000736009.1;Ontology_term=GO:0006281,GO:0008413;gbkey=CDS;gene=mutT;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414641.1;locus_tag=AB25_RS23745;product=8-oxo-dGTP diphosphatase MutT;protein_id=WP_000736009.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 140098 140295 . - . ID=gene-AB25_RS23740;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=AB25_RS23740;old_locus_tag=AB25_0130 NZ_JJMC01000001.1 Protein Homology CDS 140098 140295 . - 0 ID=cds-WP_000005042.1;Parent=gene-AB25_RS23740;Dbxref=GenBank:WP_000005042.1;Name=WP_000005042.1;Ontology_term=GO:0006355,GO:0008270;gbkey=CDS;gene=yacG;go_function=zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308132.1;locus_tag=AB25_RS23740;product=DNA gyrase inhibitor YacG;protein_id=WP_000005042.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 140305 141048 . - . ID=gene-AB25_RS23735;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=AB25_RS23735;old_locus_tag=AB25_0131 NZ_JJMC01000001.1 Protein Homology CDS 140305 141048 . - 0 ID=cds-WP_001194734.1;Parent=gene-AB25_RS23735;Dbxref=GenBank:WP_001194734.1;Name=WP_001194734.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414644.1;locus_tag=AB25_RS23735;product=cell division protein ZapD;protein_id=WP_001194734.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 141048 141668 . - . ID=gene-AB25_RS23730;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=AB25_RS23730;old_locus_tag=AB25_0132 NZ_JJMC01000001.1 Protein Homology CDS 141048 141668 . - 0 ID=cds-WP_001269520.1;Parent=gene-AB25_RS23730;Dbxref=GenBank:WP_001269520.1;Name=WP_001269520.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308134.1;locus_tag=AB25_RS23730;product=dephospho-CoA kinase;protein_id=WP_001269520.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 141693 141737 . + . ID=gene-AB25_RS31920;Name=AB25_RS31920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31920 NZ_JJMC01000001.1 Protein Homology CDS 141693 141737 . + 0 ID=cds-WP_120795372.1;Parent=gene-AB25_RS31920;Dbxref=GenBank:WP_120795372.1;Name=WP_120795372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518737.1;locus_tag=AB25_RS31920;product=protein YacM;protein_id=WP_120795372.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 141893 142936 . + . ID=gene-AB25_RS23725;Name=guaC;gbkey=Gene;gene=guaC;gene_biotype=protein_coding;locus_tag=AB25_RS23725;old_locus_tag=AB25_0133 NZ_JJMC01000001.1 Protein Homology CDS 141893 142936 . + 0 ID=cds-WP_001217342.1;Parent=gene-AB25_RS23725;Dbxref=GenBank:WP_001217342.1;Name=WP_001217342.1;Ontology_term=GO:0009117,GO:0003920,GO:1902560;gbkey=CDS;gene=guaC;go_component=GMP reductase complex|1902560||IEA;go_function=GMP reductase activity|0003920||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008461816.1;locus_tag=AB25_RS23725;product=GMP reductase;protein_id=WP_001217342.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 142971 144173 . - . ID=gene-AB25_RS23720;Name=hofC;gbkey=Gene;gene=hofC;gene_biotype=protein_coding;locus_tag=AB25_RS23720;old_locus_tag=AB25_0134 NZ_JJMC01000001.1 Protein Homology CDS 142971 144173 . - 0 ID=cds-WP_000157227.1;Parent=gene-AB25_RS23720;Dbxref=GenBank:WP_000157227.1;Name=WP_000157227.1;Ontology_term=GO:0004827;gbkey=CDS;gene=hofC;go_function=proline-tRNA ligase activity|0004827||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706061.1;locus_tag=AB25_RS23720;product=protein transport protein HofC;protein_id=WP_000157227.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 144163 145548 . - . ID=gene-AB25_RS23715;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=AB25_RS23715;old_locus_tag=AB25_0135 NZ_JJMC01000001.1 Protein Homology CDS 144163 145548 . - 0 ID=cds-WP_001025173.1;Parent=gene-AB25_RS23715;Dbxref=GenBank:WP_001025173.1;Name=WP_001025173.1;gbkey=CDS;gene=gspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308138.1;locus_tag=AB25_RS23715;product=type II secretion system protein GspE;protein_id=WP_001025173.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 145558 145998 . - . ID=gene-AB25_RS23710;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=AB25_RS23710;old_locus_tag=AB25_0136 NZ_JJMC01000001.1 Protein Homology CDS 145558 145998 . - 0 ID=cds-WP_000360895.1;Parent=gene-AB25_RS23710;Dbxref=GenBank:WP_000360895.1;Name=WP_000360895.1;gbkey=CDS;gene=ppdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414650.1;locus_tag=AB25_RS23710;product=prepilin peptidase-dependent pilin;protein_id=WP_000360895.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 146201 147094 . - . ID=gene-AB25_RS23705;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=AB25_RS23705;old_locus_tag=AB25_0137 NZ_JJMC01000001.1 Protein Homology CDS 146201 147094 . - 0 ID=cds-WP_001135174.1;Parent=gene-AB25_RS23705;Dbxref=GenBank:WP_001135174.1;Name=WP_001135174.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414651.1;locus_tag=AB25_RS23705;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_001135174.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 147182 147733 . + . ID=gene-AB25_RS23700;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=AB25_RS23700;old_locus_tag=AB25_0138 NZ_JJMC01000001.1 Protein Homology CDS 147182 147733 . + 0 ID=cds-WP_000923721.1;Parent=gene-AB25_RS23700;Dbxref=GenBank:WP_000923721.1;Name=WP_000923721.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414652.1;locus_tag=AB25_RS23700;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WP_000923721.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 147730 148584 . + . ID=gene-AB25_RS23695;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;locus_tag=AB25_RS23695;old_locus_tag=AB25_0139 NZ_JJMC01000001.1 Protein Homology CDS 147730 148584 . + 0 ID=cds-WP_000172005.1;Parent=gene-AB25_RS23695;Dbxref=GenBank:WP_000172005.1;Name=WP_000172005.1;gbkey=CDS;gene=ampE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414653.1;locus_tag=AB25_RS23695;product=beta-lactamase regulator AmpE;protein_id=WP_000172005.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 148627 150000 . - . ID=gene-AB25_RS23690;Name=aroP;gbkey=Gene;gene=aroP;gene_biotype=protein_coding;locus_tag=AB25_RS23690;old_locus_tag=AB25_0140 NZ_JJMC01000001.1 Protein Homology CDS 148627 150000 . - 0 ID=cds-WP_000969915.1;Parent=gene-AB25_RS23690;Dbxref=GenBank:WP_000969915.1;Name=WP_000969915.1;Ontology_term=GO:0006865;gbkey=CDS;gene=aroP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414654.1;locus_tag=AB25_RS23690;product=aromatic amino acid transporter AroP;protein_id=WP_000969915.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 150541 151305 . + . ID=gene-AB25_RS23685;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=AB25_RS23685;old_locus_tag=AB25_0141 NZ_JJMC01000001.1 Protein Homology CDS 150541 151305 . + 0 ID=cds-WP_000331776.1;Parent=gene-AB25_RS23685;Dbxref=GenBank:WP_000331776.1;Name=WP_000331776.1;gbkey=CDS;gene=pdhR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308144.1;locus_tag=AB25_RS23685;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=WP_000331776.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 151466 154129 . + . ID=gene-AB25_RS23680;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=AB25_RS23680;old_locus_tag=AB25_0142 NZ_JJMC01000001.1 Protein Homology CDS 151466 154129 . + 0 ID=cds-WP_000003820.1;Parent=gene-AB25_RS23680;Dbxref=GenBank:WP_000003820.1;Name=WP_000003820.1;Ontology_term=GO:0006086,GO:0004738,GO:0045254;gbkey=CDS;gene=aceE;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase activity|0004738||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814576.1;locus_tag=AB25_RS23680;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_000003820.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 154144 156036 . + . ID=gene-AB25_RS23675;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=AB25_RS23675;old_locus_tag=AB25_0143 NZ_JJMC01000001.1 Protein Homology CDS 154144 156036 . + 0 ID=cds-WP_000963518.1;Parent=gene-AB25_RS23675;Dbxref=GenBank:WP_000963518.1;Name=WP_000963518.1;Ontology_term=GO:0006096,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414657.1;locus_tag=AB25_RS23675;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_000963518.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 156244 157668 . + . ID=gene-AB25_RS23670;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=AB25_RS23670;old_locus_tag=AB25_0144 NZ_JJMC01000001.1 Protein Homology CDS 156244 157668 . + 0 ID=cds-WP_000102485.1;Parent=gene-AB25_RS23670;Dbxref=GenBank:WP_000102485.1;Name=WP_000102485.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738005.1;locus_tag=AB25_RS23670;product=dihydrolipoyl dehydrogenase;protein_id=WP_000102485.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 157739 159841 . - . ID=gene-AB25_RS23665;Name=AB25_RS23665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS23665;old_locus_tag=AB25_0145 NZ_JJMC01000001.1 Protein Homology CDS 157739 159841 . - 0 ID=cds-WP_032170557.1;Parent=gene-AB25_RS23665;Dbxref=GenBank:WP_032170557.1;Name=WP_032170557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016569928.1;locus_tag=AB25_RS23665;product=DUF3300 domain-containing protein;protein_id=WP_032170557.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 160196 162793 . + . ID=gene-AB25_RS23660;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=AB25_RS23660;old_locus_tag=AB25_0147 NZ_JJMC01000001.1 Protein Homology CDS 160196 162793 . + 0 ID=cds-WP_001307570.1;Parent=gene-AB25_RS23660;Dbxref=GenBank:WP_001307570.1;Name=WP_001307570.1;Ontology_term=GO:0006099,GO:0003994,GO:0051539,GO:0005829;gbkey=CDS;gene=acnB;go_component=cytosol|0005829||IEA;go_function=aconitate hydratase activity|0003994||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414660.1;locus_tag=AB25_RS23660;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_001307570.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 162968 163330 . + . ID=gene-AB25_RS23655;Name=yacL;gbkey=Gene;gene=yacL;gene_biotype=protein_coding;locus_tag=AB25_RS23655;old_locus_tag=AB25_0148 NZ_JJMC01000001.1 Protein Homology CDS 162968 163330 . + 0 ID=cds-WP_000384306.1;Parent=gene-AB25_RS23655;Dbxref=GenBank:WP_000384306.1;Name=WP_000384306.1;gbkey=CDS;gene=yacL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414661.2;locus_tag=AB25_RS23655;product=protein YacL;protein_id=WP_000384306.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 163368 164162 . - . ID=gene-AB25_RS23650;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=AB25_RS23650;old_locus_tag=AB25_0149 NZ_JJMC01000001.1 Protein Homology CDS 163368 164162 . - 0 ID=cds-WP_000734287.1;Parent=gene-AB25_RS23650;Dbxref=GenBank:WP_000734287.1;Name=WP_000734287.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308151.1;locus_tag=AB25_RS23650;product=adenosylmethionine decarboxylase;protein_id=WP_000734287.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 164178 165044 . - . ID=gene-AB25_RS23645;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=AB25_RS23645;old_locus_tag=AB25_0150 NZ_JJMC01000001.1 Protein Homology CDS 164178 165044 . - 0 ID=cds-WP_000818428.1;Parent=gene-AB25_RS23645;Dbxref=GenBank:WP_000818428.1;Name=WP_000818428.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414663.1;locus_tag=AB25_RS23645;product=polyamine aminopropyltransferase;protein_id=WP_000818428.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 165150 165497 . - . ID=gene-AB25_RS23640;Name=yacC;gbkey=Gene;gene=yacC;gene_biotype=protein_coding;locus_tag=AB25_RS23640;old_locus_tag=AB25_0151 NZ_JJMC01000001.1 Protein Homology CDS 165150 165497 . - 0 ID=cds-WP_001295568.1;Parent=gene-AB25_RS23640;Dbxref=GenBank:WP_001295568.1;Name=WP_001295568.1;gbkey=CDS;gene=yacC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414664.4;locus_tag=AB25_RS23640;product=YacC family pilotin-like protein;protein_id=WP_001295568.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 165663 167213 . + . ID=gene-AB25_RS23635;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=protein_coding;locus_tag=AB25_RS23635;old_locus_tag=AB25_0152 NZ_JJMC01000001.1 Protein Homology CDS 165663 167213 . + 0 ID=cds-WP_001189623.1;Parent=gene-AB25_RS23635;Dbxref=GenBank:WP_001189623.1;Name=WP_001189623.1;Ontology_term=GO:0005507,GO:0016491;gbkey=CDS;gene=cueO;go_function=copper ion binding|0005507||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414665.1;locus_tag=AB25_RS23635;product=multicopper oxidase CueO;protein_id=WP_001189623.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 167415 169805 . - . ID=gene-AB25_RS23630;Name=gcd;gbkey=Gene;gene=gcd;gene_biotype=protein_coding;locus_tag=AB25_RS23630;old_locus_tag=AB25_0154 NZ_JJMC01000001.1 Protein Homology CDS 167415 169805 . - 0 ID=cds-WP_001324194.1;Parent=gene-AB25_RS23630;Dbxref=GenBank:WP_001324194.1;Name=WP_001324194.1;gbkey=CDS;gene=gcd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414666.1;locus_tag=AB25_RS23630;product=quinoprotein glucose dehydrogenase;protein_id=WP_001324194.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 170011 170547 . + . ID=gene-AB25_RS23625;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=AB25_RS23625;old_locus_tag=AB25_0155 NZ_JJMC01000001.1 Protein Homology CDS 170011 170547 . + 0 ID=cds-WP_000683335.1;Parent=gene-AB25_RS23625;Dbxref=GenBank:WP_000683335.1;Name=WP_000683335.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204384.1;locus_tag=AB25_RS23625;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_000683335.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 170588 171250 . - . ID=gene-AB25_RS23620;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=AB25_RS23620;old_locus_tag=AB25_0156 NZ_JJMC01000001.1 Protein Homology CDS 170588 171250 . - 0 ID=cds-WP_000651599.1;Parent=gene-AB25_RS23620;Dbxref=GenBank:WP_000651599.1;Name=WP_000651599.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414668.1;locus_tag=AB25_RS23620;product=carbonate dehydratase;protein_id=WP_000651599.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 171359 172285 . + . ID=gene-AB25_RS23615;Name=yadG;gbkey=Gene;gene=yadG;gene_biotype=protein_coding;locus_tag=AB25_RS23615;old_locus_tag=AB25_0157 NZ_JJMC01000001.1 Protein Homology CDS 171359 172285 . + 0 ID=cds-WP_000150637.1;Parent=gene-AB25_RS23615;Dbxref=GenBank:WP_000150637.1;Name=WP_000150637.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;gene=yadG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414669.1;locus_tag=AB25_RS23615;product=ABC transporter ATP-binding protein;protein_id=WP_000150637.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 172282 173052 . + . ID=gene-AB25_RS23610;Name=yadH;gbkey=Gene;gene=yadH;gene_biotype=protein_coding;locus_tag=AB25_RS23610;old_locus_tag=AB25_0158 NZ_JJMC01000001.1 Protein Homology CDS 172282 173052 . + 0 ID=cds-WP_000972203.1;Parent=gene-AB25_RS23610;Dbxref=GenBank:WP_000972203.1;Name=WP_000972203.1;Ontology_term=GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;gene=yadH;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747261.1;locus_tag=AB25_RS23610;product=ABC transporter permease;protein_id=WP_000972203.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 173157 173597 . + . ID=gene-AB25_RS23605;Name=yadI;gbkey=Gene;gene=yadI;gene_biotype=protein_coding;locus_tag=AB25_RS23605;old_locus_tag=AB25_0159 NZ_JJMC01000001.1 Protein Homology CDS 173157 173597 . + 0 ID=cds-WP_000901987.1;Parent=gene-AB25_RS23605;Dbxref=GenBank:WP_000901987.1;Name=WP_000901987.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;gene=yadI;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414671.1;locus_tag=AB25_RS23605;product=PTS sugar transporter subunit IIA;protein_id=WP_000901987.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 173661 174890 . + . ID=gene-AB25_RS23600;Name=yadE;gbkey=Gene;gene=yadE;gene_biotype=protein_coding;locus_tag=AB25_RS23600;old_locus_tag=AB25_0160 NZ_JJMC01000001.1 Protein Homology CDS 173661 174890 . + 0 ID=cds-WP_000277872.1;Parent=gene-AB25_RS23600;Dbxref=GenBank:WP_000277872.1;Name=WP_000277872.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;gene=yadE;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414672.1;locus_tag=AB25_RS23600;product=polysaccharide deacetylase family protein;protein_id=WP_000277872.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 174894 175274 . - . ID=gene-AB25_RS23595;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=AB25_RS23595;old_locus_tag=AB25_0161 NZ_JJMC01000001.1 Protein Homology CDS 174894 175274 . - 0 ID=cds-WP_000621515.1;Parent=gene-AB25_RS23595;Dbxref=GenBank:WP_000621515.1;Name=WP_000621515.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124704.1;locus_tag=AB25_RS23595;product=aspartate 1-decarboxylase;protein_id=WP_000621515.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 175548 176450 . + . ID=gene-AB25_RS23590;Name=rpnC;gbkey=Gene;gene=rpnC;gene_biotype=protein_coding;locus_tag=AB25_RS23590;old_locus_tag=AB25_0163 NZ_JJMC01000001.1 Protein Homology CDS 175548 176450 . + 0 ID=cds-WP_000339944.1;Parent=gene-AB25_RS23590;Dbxref=GenBank:WP_000339944.1;Name=WP_000339944.1;gbkey=CDS;gene=rpnC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414674.1;locus_tag=AB25_RS23590;product=recombination-promoting nuclease RpnC;protein_id=WP_000339944.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 176524 177375 . - . ID=gene-AB25_RS23585;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=AB25_RS23585;old_locus_tag=AB25_0164 NZ_JJMC01000001.1 Protein Homology CDS 176524 177375 . - 0 ID=cds-WP_000905383.1;Parent=gene-AB25_RS23585;Dbxref=GenBank:WP_000905383.1;Name=WP_000905383.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414675.1;locus_tag=AB25_RS23585;product=pantoate--beta-alanine ligase;protein_id=WP_000905383.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 177387 178181 . - . ID=gene-AB25_RS23580;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=AB25_RS23580;old_locus_tag=AB25_0165 NZ_JJMC01000001.1 Protein Homology CDS 177387 178181 . - 0 ID=cds-WP_000805445.1;Parent=gene-AB25_RS23580;Dbxref=GenBank:WP_000805445.1;Name=WP_000805445.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000805487.1;locus_tag=AB25_RS23580;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_000805445.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 178294 179637 . - . ID=gene-AB25_RS23575;Name=AB25_RS23575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS23575;old_locus_tag=AB25_0166 NZ_JJMC01000001.1 Protein Homology CDS 178294 179637 . - 0 ID=cds-WP_001331232.1;Parent=gene-AB25_RS23575;Dbxref=GenBank:WP_001331232.1;Name=WP_001331232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001462196.1;locus_tag=AB25_RS23575;product=fimbrial-like adhesin;protein_id=WP_001331232.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 179621 180217 . - . ID=gene-AB25_RS23570;Name=AB25_RS23570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS23570;old_locus_tag=AB25_0167 NZ_JJMC01000001.1 Protein Homology CDS 179621 180217 . - 0 ID=cds-WP_000553764.1;Parent=gene-AB25_RS23570;Dbxref=GenBank:WP_000553764.1;Name=WP_000553764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414678.1;locus_tag=AB25_RS23570;product=fimbrial-like protein;protein_id=WP_000553764.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 180244 180846 . - . ID=gene-AB25_RS23565;Name=yadL;gbkey=Gene;gene=yadL;gene_biotype=protein_coding;locus_tag=AB25_RS23565;old_locus_tag=AB25_0168 NZ_JJMC01000001.1 Protein Homology CDS 180244 180846 . - 0 ID=cds-WP_000143205.1;Parent=gene-AB25_RS23565;Dbxref=GenBank:WP_000143205.1;Name=WP_000143205.1;gbkey=CDS;gene=yadL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000143198.1;locus_tag=AB25_RS23565;product=fimbrial-like protein YadL;protein_id=WP_000143205.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 180861 181430 . - . ID=gene-AB25_RS23560;Name=yadM;gbkey=Gene;gene=yadM;gene_biotype=protein_coding;locus_tag=AB25_RS23560;old_locus_tag=AB25_0169 NZ_JJMC01000001.1 Protein Homology CDS 180861 181430 . - 0 ID=cds-WP_000591057.1;Parent=gene-AB25_RS23560;Dbxref=GenBank:WP_000591057.1;Name=WP_000591057.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=yadM;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414680.4;locus_tag=AB25_RS23560;product=fimbrial protein;protein_id=WP_000591057.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 181447 184047 . - . ID=gene-AB25_RS23555;Name=htrE;gbkey=Gene;gene=htrE;gene_biotype=protein_coding;locus_tag=AB25_RS23555;old_locus_tag=AB25_0170 NZ_JJMC01000001.1 Protein Homology CDS 181447 184047 . - 0 ID=cds-WP_001739066.1;Parent=gene-AB25_RS23555;Dbxref=GenBank:WP_001739066.1;Name=WP_001739066.1;gbkey=CDS;gene=htrE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414681.1;locus_tag=AB25_RS23555;product=Yad fimbria usher protein HtrE;protein_id=WP_001739066.1;transl_table=11 NZ_JJMC01000001.1 RefSeq pseudogene 184082 184821 . - . ID=gene-AB25_RS0124405;Name=yadV;gbkey=Gene;gene=yadV;gene_biotype=pseudogene;locus_tag=AB25_RS0124405;pseudo=true NZ_JJMC01000001.1 Protein Homology CDS 184082 184821 . - 0 ID=cds-AB25_RS0124405;Parent=gene-AB25_RS0124405;Note=frameshifted;gbkey=CDS;gene=yadV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414682.1;locus_tag=AB25_RS0124405;product=fimbrial chaperone;pseudo=true;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 184926 185510 . - . ID=gene-AB25_RS23550;Name=yadN;gbkey=Gene;gene=yadN;gene_biotype=protein_coding;locus_tag=AB25_RS23550;old_locus_tag=AB25_0173 NZ_JJMC01000001.1 Protein Homology CDS 184926 185510 . - 0 ID=cds-WP_000038438.1;Parent=gene-AB25_RS23550;Dbxref=GenBank:WP_000038438.1;Name=WP_000038438.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=yadN;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414683.1;locus_tag=AB25_RS23550;product=fimbrial protein;protein_id=WP_000038438.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 185880 186359 . - . ID=gene-AB25_RS23545;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=AB25_RS23545;old_locus_tag=AB25_0175 NZ_JJMC01000001.1 Protein Homology CDS 185880 186359 . - 0 ID=cds-WP_000215124.1;Parent=gene-AB25_RS23545;Dbxref=GenBank:WP_000215124.1;Name=WP_000215124.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706090.1;locus_tag=AB25_RS23545;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_000215124.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 186356 187753 . - . ID=gene-AB25_RS23540;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=AB25_RS23540;old_locus_tag=AB25_0176 NZ_JJMC01000001.1 Protein Homology CDS 186356 187753 . - 0 ID=cds-WP_203226324.1;Parent=gene-AB25_RS23540;Dbxref=GenBank:WP_203226324.1;Name=WP_203226324.1;Ontology_term=GO:0003723,GO:1990817;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,poly(A) RNA polymerase activity|1990817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414685.4;locus_tag=AB25_RS23540;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_203226324.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 187813 188709 . - . ID=gene-AB25_RS23535;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=AB25_RS23535;old_locus_tag=AB25_0177 NZ_JJMC01000001.1 Protein Homology CDS 187813 188709 . - 0 ID=cds-WP_000132715.1;Parent=gene-AB25_RS23535;Dbxref=GenBank:WP_000132715.1;Name=WP_000132715.1;Ontology_term=GO:0006400,GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;gene=gluQRS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA modification|0006400||IEA,tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001432381.1;locus_tag=AB25_RS23535;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WP_000132715.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 188776 189231 . - . ID=gene-AB25_RS23530;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=AB25_RS23530;old_locus_tag=AB25_0178 NZ_JJMC01000001.1 Protein Homology CDS 188776 189231 . - 0 ID=cds-WP_001155227.1;Parent=gene-AB25_RS23530;Dbxref=GenBank:WP_001155227.1;Name=WP_001155227.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209354.1;locus_tag=AB25_RS23530;product=RNA polymerase-binding protein DksA;protein_id=WP_001155227.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 189409 190113 . - . ID=gene-AB25_RS23525;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=AB25_RS23525;old_locus_tag=AB25_0179 NZ_JJMC01000001.1 Protein Homology CDS 189409 190113 . - 0 ID=cds-WP_000396036.1;Parent=gene-AB25_RS23525;Dbxref=GenBank:WP_000396036.1;Name=WP_000396036.1;Ontology_term=GO:0003677;gbkey=CDS;gene=sfsA;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308177.1;locus_tag=AB25_RS23525;product=DNA/RNA nuclease SfsA;protein_id=WP_000396036.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 190128 190658 . - . ID=gene-AB25_RS23520;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=AB25_RS23520;old_locus_tag=AB25_0180 NZ_JJMC01000001.1 Protein Homology CDS 190128 190658 . - 0 ID=cds-WP_001294700.1;Parent=gene-AB25_RS23520;Dbxref=GenBank:WP_001294700.1;Name=WP_001294700.1;Ontology_term=GO:0004113,GO:0008664;gbkey=CDS;gene=thpR;go_function=2'%2C3'-cyclic-nucleotide 3'-phosphodiesterase activity|0004113||IEA,RNA 2'%2C3'-cyclic 3'-phosphodiesterase activity|0008664||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414689.4;locus_tag=AB25_RS23520;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WP_001294700.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 190732 193161 . + . ID=gene-AB25_RS23515;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=AB25_RS23515;old_locus_tag=AB25_0181 NZ_JJMC01000001.1 Protein Homology CDS 190732 193161 . + 0 ID=cds-WP_001356280.1;Parent=gene-AB25_RS23515;Dbxref=GenBank:WP_001356280.1;Name=WP_001356280.1;Ontology_term=GO:0004386,GO:0005524;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414690.4;locus_tag=AB25_RS23515;product=ATP-dependent helicase HrpB;protein_id=WP_001356280.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 193357 195891 . + . ID=gene-AB25_RS23510;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=AB25_RS23510;old_locus_tag=AB25_0182 NZ_JJMC01000001.1 Protein Homology CDS 193357 195891 . + 0 ID=cds-WP_000918166.1;Parent=gene-AB25_RS23510;Dbxref=GenBank:WP_000918166.1;Name=WP_000918166.1;Ontology_term=GO:0009252,GO:0046677,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706097.2;locus_tag=AB25_RS23510;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_000918166.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 196111 198300 . + . ID=gene-AB25_RS23505;Name=fhuA;gbkey=Gene;gene=fhuA;gene_biotype=protein_coding;locus_tag=AB25_RS23505;old_locus_tag=AB25_0184 NZ_JJMC01000001.1 Protein Homology CDS 196111 198300 . + 0 ID=cds-WP_000124383.1;Parent=gene-AB25_RS23505;Dbxref=GenBank:WP_000124383.1;Name=WP_000124383.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuA;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459196.1;locus_tag=AB25_RS23505;product=ferrichrome porin FhuA;protein_id=WP_000124383.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 198351 199148 . + . ID=gene-AB25_RS23500;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;locus_tag=AB25_RS23500;old_locus_tag=AB25_0185 NZ_JJMC01000001.1 Protein Homology CDS 198351 199148 . + 0 ID=cds-WP_001158933.1;Parent=gene-AB25_RS23500;Dbxref=GenBank:WP_001158933.1;Name=WP_001158933.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fhuC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308182.1;locus_tag=AB25_RS23500;product=Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC;protein_id=WP_001158933.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 199148 200038 . + . ID=gene-AB25_RS23495;Name=fhuD;gbkey=Gene;gene=fhuD;gene_biotype=protein_coding;locus_tag=AB25_RS23495;old_locus_tag=AB25_0186 NZ_JJMC01000001.1 Protein Homology CDS 199148 200038 . + 0 ID=cds-WP_000015998.1;Parent=gene-AB25_RS23495;Dbxref=GenBank:WP_000015998.1;Name=WP_000015998.1;gbkey=CDS;gene=fhuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706100.2;locus_tag=AB25_RS23495;product=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;protein_id=WP_000015998.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 200035 202017 . + . ID=gene-AB25_RS23490;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=protein_coding;locus_tag=AB25_RS23490;old_locus_tag=AB25_0187 NZ_JJMC01000001.1 Protein Homology CDS 200035 202017 . + 0 ID=cds-WP_001506879.1;Parent=gene-AB25_RS23490;Dbxref=GenBank:WP_001506879.1;Name=WP_001506879.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fhuB;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414695.1;locus_tag=AB25_RS23490;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;protein_id=WP_001506879.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 202052 203332 . - . ID=gene-AB25_RS23485;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=AB25_RS23485;old_locus_tag=AB25_0188 NZ_JJMC01000001.1 Protein Homology CDS 202052 203332 . - 0 ID=cds-WP_000045304.1;Parent=gene-AB25_RS23485;Dbxref=GenBank:WP_000045304.1;Name=WP_000045304.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233394.1;locus_tag=AB25_RS23485;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_000045304.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 203498 203545 . + . ID=gene-AB25_RS32220;Name=yadX;gbkey=Gene;gene=yadX;gene_biotype=protein_coding;locus_tag=AB25_RS32220 NZ_JJMC01000001.1 Protein Homology CDS 203498 203545 . + 0 ID=cds-WP_211180485.1;Parent=gene-AB25_RS32220;Dbxref=GenBank:WP_211180485.1;Name=WP_211180485.1;gbkey=CDS;gene=yadX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051173.1;locus_tag=AB25_RS32220;product=protein YadX;protein_id=WP_211180485.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 203557 204978 . + . ID=gene-AB25_RS23480;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=protein_coding;locus_tag=AB25_RS23480;old_locus_tag=AB25_0189 NZ_JJMC01000001.1 Protein Homology CDS 203557 204978 . + 0 ID=cds-WP_000845394.1;Parent=gene-AB25_RS23480;Dbxref=GenBank:WP_000845394.1;Name=WP_000845394.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0005886;gbkey=CDS;gene=clcA;go_component=plasma membrane|0005886||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414697.1;locus_tag=AB25_RS23480;product=H(+)/Cl(-) exchange transporter ClcA;protein_id=WP_000845394.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 205002 205067 . + . ID=gene-AB25_RS31580;Name=yadW;gbkey=Gene;gene=yadW;gene_biotype=protein_coding;locus_tag=AB25_RS31580 NZ_JJMC01000001.1 Protein Homology CDS 205002 205067 . + 0 ID=cds-WP_120795373.1;Parent=gene-AB25_RS31580;Dbxref=GenBank:WP_120795373.1;Name=WP_120795373.1;gbkey=CDS;gene=yadW;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518738.1;locus_tag=AB25_RS31580;product=small protein YadW;protein_id=WP_120795373.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 205060 205404 . + . ID=gene-AB25_RS23475;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=AB25_RS23475;old_locus_tag=AB25_0190 NZ_JJMC01000001.1 Protein Homology CDS 205060 205404 . + 0 ID=cds-WP_001295564.1;Parent=gene-AB25_RS23475;Dbxref=GenBank:WP_001295564.1;Name=WP_001295564.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295564.1;locus_tag=AB25_RS23475;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_001295564.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 205451 206074 . - . ID=gene-AB25_RS23470;Name=yadS;gbkey=Gene;gene=yadS;gene_biotype=protein_coding;locus_tag=AB25_RS23470;old_locus_tag=AB25_0191 NZ_JJMC01000001.1 Protein Homology CDS 205451 206074 . - 0 ID=cds-WP_000964221.1;Parent=gene-AB25_RS23470;Dbxref=GenBank:WP_000964221.1;Name=WP_000964221.1;gbkey=CDS;gene=yadS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414699.1;locus_tag=AB25_RS23470;product=TRIC cation channel family protein;protein_id=WP_000964221.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 206112 206912 . - . ID=gene-AB25_RS23465;Name=btuF;gbkey=Gene;gene=btuF;gene_biotype=protein_coding;locus_tag=AB25_RS23465;old_locus_tag=AB25_0192 NZ_JJMC01000001.1 Protein Homology CDS 206112 206912 . - 0 ID=cds-WP_001129927.1;Parent=gene-AB25_RS23465;Dbxref=GenBank:WP_001129927.1;Name=WP_001129927.1;Ontology_term=GO:0005524,GO:0031419;gbkey=CDS;gene=btuF;go_function=ATP binding|0005524||IEA,cobalamin binding|0031419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414700.1;locus_tag=AB25_RS23465;product=vitamin B12 ABC transporter substrate-binding protein BtuF;protein_id=WP_001129927.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 206905 207603 . - . ID=gene-AB25_RS23460;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=AB25_RS23460;old_locus_tag=AB25_0193 NZ_JJMC01000001.1 Protein Homology CDS 206905 207603 . - 0 ID=cds-WP_000689833.1;Parent=gene-AB25_RS23460;Dbxref=GenBank:WP_000689833.1;Name=WP_000689833.1;Ontology_term=GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308190.1;locus_tag=AB25_RS23460;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_000689833.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 207687 209204 . + . ID=gene-AB25_RS23455;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=AB25_RS23455;old_locus_tag=AB25_0194 NZ_JJMC01000001.1 Protein Homology CDS 207687 209204 . + 0 ID=cds-WP_000057099.1;Parent=gene-AB25_RS23455;Dbxref=GenBank:WP_000057099.1;Name=WP_000057099.1;Ontology_term=GO:0006203,GO:0000287,GO:0008832;gbkey=CDS;gene=dgt;go_function=magnesium ion binding|0000287||IEA,dGTPase activity|0008832||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414702.1;locus_tag=AB25_RS23455;product=dGTPase;protein_id=WP_000057099.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 209334 210758 . + . ID=gene-AB25_RS23450;Name=degP;gbkey=Gene;gene=degP;gene_biotype=protein_coding;locus_tag=AB25_RS23450;old_locus_tag=AB25_0195 NZ_JJMC01000001.1 Protein Homology CDS 209334 210758 . + 0 ID=cds-WP_000753945.1;Parent=gene-AB25_RS23450;Dbxref=GenBank:WP_000753945.1;Name=WP_000753945.1;gbkey=CDS;gene=degP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308192.1;locus_tag=AB25_RS23450;product=serine endoprotease DegP;protein_id=WP_000753945.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 210913 212070 . + . ID=gene-AB25_RS23445;Name=cdaR;gbkey=Gene;gene=cdaR;gene_biotype=protein_coding;locus_tag=AB25_RS23445;old_locus_tag=AB25_0196 NZ_JJMC01000001.1 Protein Homology CDS 210913 212070 . + 0 ID=cds-WP_000929439.1;Parent=gene-AB25_RS23445;Dbxref=GenBank:WP_000929439.1;Name=WP_000929439.1;gbkey=CDS;gene=cdaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308193.1;locus_tag=AB25_RS23445;product=DNA-binding transcriptional regulator CdaR;protein_id=WP_000929439.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 212159 212545 . - . ID=gene-AB25_RS23440;Name=yaeH;gbkey=Gene;gene=yaeH;gene_biotype=protein_coding;locus_tag=AB25_RS23440;old_locus_tag=AB25_0197 NZ_JJMC01000001.1 Protein Homology CDS 212159 212545 . - 0 ID=cds-WP_000272188.1;Parent=gene-AB25_RS23440;Dbxref=GenBank:WP_000272188.1;Name=WP_000272188.1;gbkey=CDS;gene=yaeH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272186.1;locus_tag=AB25_RS23440;product=DUF3461 family protein;protein_id=WP_000272188.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 212860 213684 . - . ID=gene-AB25_RS23435;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=AB25_RS23435;old_locus_tag=AB25_0198 NZ_JJMC01000001.1 Protein Homology CDS 212860 213684 . - 0 ID=cds-WP_001186650.1;Parent=gene-AB25_RS23435;Dbxref=GenBank:WP_001186650.1;Name=WP_001186650.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132123.1;locus_tag=AB25_RS23435;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_001186650.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 213715 216387 . - . ID=gene-AB25_RS23430;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=AB25_RS23430;old_locus_tag=AB25_0199 NZ_JJMC01000001.1 Protein Homology CDS 213715 216387 . - 0 ID=cds-WP_001094571.1;Parent=gene-AB25_RS23430;Dbxref=GenBank:WP_001094571.1;Name=WP_001094571.1;Ontology_term=GO:0008152,GO:0016779;gbkey=CDS;gene=glnD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308196.1;locus_tag=AB25_RS23430;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=WP_001094571.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 216449 217243 . - . ID=gene-AB25_RS23425;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=AB25_RS23425;old_locus_tag=AB25_0200 NZ_JJMC01000001.1 Protein Homology CDS 216449 217243 . - 0 ID=cds-WP_001018194.1;Parent=gene-AB25_RS23425;Dbxref=GenBank:WP_001018194.1;Name=WP_001018194.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308197.1;locus_tag=AB25_RS23425;product=type I methionyl aminopeptidase;protein_id=WP_001018194.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 217611 218336 . + . ID=gene-AB25_RS23420;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=AB25_RS23420;old_locus_tag=AB25_0201 NZ_JJMC01000001.1 Protein Homology CDS 217611 218336 . + 0 ID=cds-WP_000246884.1;Parent=gene-AB25_RS23420;Dbxref=GenBank:WP_000246884.1;Name=WP_000246884.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=AB25_RS23420;product=30S ribosomal protein S2;protein_id=WP_000246884.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 218594 219445 . + . ID=gene-AB25_RS23415;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=AB25_RS23415;old_locus_tag=AB25_0203 NZ_JJMC01000001.1 Protein Homology CDS 218594 219445 . + 0 ID=cds-WP_000818114.1;Parent=gene-AB25_RS23415;Dbxref=GenBank:WP_000818114.1;Name=WP_000818114.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132116.1;locus_tag=AB25_RS23415;product=translation elongation factor Ts;protein_id=WP_000818114.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 219592 220317 . + . ID=gene-AB25_RS23410;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=AB25_RS23410;old_locus_tag=AB25_0204 NZ_JJMC01000001.1 Protein Homology CDS 219592 220317 . + 0 ID=cds-WP_000224573.1;Parent=gene-AB25_RS23410;Dbxref=GenBank:WP_000224573.1;Name=WP_000224573.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000224576.1;locus_tag=AB25_RS23410;product=UMP kinase;protein_id=WP_000224573.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 220467 221024 . + . ID=gene-AB25_RS23405;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=AB25_RS23405;old_locus_tag=AB25_0205 NZ_JJMC01000001.1 Protein Homology CDS 220467 221024 . + 0 ID=cds-WP_000622418.1;Parent=gene-AB25_RS23405;Dbxref=GenBank:WP_000622418.1;Name=WP_000622418.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622421.1;locus_tag=AB25_RS23405;product=ribosome recycling factor;protein_id=WP_000622418.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 221116 222312 . + . ID=gene-AB25_RS23400;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=AB25_RS23400;old_locus_tag=AB25_0206 NZ_JJMC01000001.1 Protein Homology CDS 221116 222312 . + 0 ID=cds-WP_000811917.1;Parent=gene-AB25_RS23400;Dbxref=GenBank:WP_000811917.1;Name=WP_000811917.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;gene=ispC;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414715.1;locus_tag=AB25_RS23400;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_000811917.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 222501 223259 . + . ID=gene-AB25_RS23395;Name=ispU;gbkey=Gene;gene=ispU;gene_biotype=protein_coding;gene_synonym=uppS;locus_tag=AB25_RS23395;old_locus_tag=AB25_0207 NZ_JJMC01000001.1 Protein Homology CDS 222501 223259 . + 0 ID=cds-WP_001295562.1;Parent=gene-AB25_RS23395;Dbxref=GenBank:WP_001295562.1;Name=WP_001295562.1;Ontology_term=GO:0043164,GO:0004659,GO:0008834;gbkey=CDS;gene=ispU;go_function=prenyltransferase activity|0004659||IEA,ditrans%2Cpolycis-undecaprenyl-diphosphate synthase [(2E%2C6E)-farnesyl-diphosphate specific] activity|0008834||IEA;go_process=Gram-negative-bacterium-type cell wall biogenesis|0043164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308203.2;locus_tag=AB25_RS23395;product=(2E%2C6E)-farnesyl-diphosphate-specific ditrans%2Cpolycis-undecaprenyl-diphosphate synthase;protein_id=WP_001295562.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 223272 224129 . + . ID=gene-AB25_RS23390;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=AB25_RS23390;old_locus_tag=AB25_0209 NZ_JJMC01000001.1 Protein Homology CDS 223272 224129 . + 0 ID=cds-WP_000922446.1;Parent=gene-AB25_RS23390;Dbxref=GenBank:WP_000922446.1;Name=WP_000922446.1;Ontology_term=GO:0016772;gbkey=CDS;gene=cdsA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414717.2;locus_tag=AB25_RS23390;product=phosphatidate cytidylyltransferase;protein_id=WP_000922446.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 224141 225493 . + . ID=gene-AB25_RS23385;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=AB25_RS23385;old_locus_tag=AB25_0210 NZ_JJMC01000001.1 Protein Homology CDS 224141 225493 . + 0 ID=cds-WP_001295561.1;Parent=gene-AB25_RS23385;Dbxref=GenBank:WP_001295561.1;Name=WP_001295561.1;Ontology_term=GO:0006508,GO:0004222,GO:0005515,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308205.1;locus_tag=AB25_RS23385;product=sigma E protease regulator RseP;protein_id=WP_001295561.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 225523 227955 . + . ID=gene-AB25_RS23380;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=AB25_RS23380;old_locus_tag=AB25_0211 NZ_JJMC01000001.1 Protein Homology CDS 225523 227955 . + 0 ID=cds-WP_001240896.1;Parent=gene-AB25_RS23380;Dbxref=GenBank:WP_001240896.1;Name=WP_001240896.1;Ontology_term=GO:0071709,GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;go_process=membrane assembly|0071709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308206.1;locus_tag=AB25_RS23380;product=outer membrane protein assembly factor BamA;protein_id=WP_001240896.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 228077 228562 . + . ID=gene-AB25_RS23375;Name=skp;gbkey=Gene;gene=skp;gene_biotype=protein_coding;gene_synonym=hlpA,ompH;locus_tag=AB25_RS23375;old_locus_tag=AB25_0212 NZ_JJMC01000001.1 Protein Homology CDS 228077 228562 . + 0 ID=cds-WP_000758956.1;Parent=gene-AB25_RS23375;Dbxref=GenBank:WP_000758956.1;Name=WP_000758956.1;gbkey=CDS;gene=skp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308207.1;locus_tag=AB25_RS23375;product=molecular chaperone Skp;protein_id=WP_000758956.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 228566 229591 . + . ID=gene-AB25_RS23370;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=AB25_RS23370;old_locus_tag=AB25_0213 NZ_JJMC01000001.1 Protein Homology CDS 228566 229591 . + 0 ID=cds-WP_001139279.1;Parent=gene-AB25_RS23370;Dbxref=GenBank:WP_001139279.1;Name=WP_001139279.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132101.1;locus_tag=AB25_RS23370;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_001139279.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 229696 230151 . + . ID=gene-AB25_RS23365;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=AB25_RS23365;old_locus_tag=AB25_0214 NZ_JJMC01000001.1 Protein Homology CDS 229696 230151 . + 0 ID=cds-WP_000210739.1;Parent=gene-AB25_RS23365;Dbxref=GenBank:WP_000210739.1;Name=WP_000210739.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210741.1;locus_tag=AB25_RS23365;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_000210739.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 230155 230943 . + . ID=gene-AB25_RS23360;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=AB25_RS23360;old_locus_tag=AB25_0215 NZ_JJMC01000001.1 Protein Homology CDS 230155 230943 . + 0 ID=cds-WP_000565966.1;Parent=gene-AB25_RS23360;Dbxref=GenBank:WP_000565966.1;Name=WP_000565966.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132096.1;locus_tag=AB25_RS23360;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_000565966.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 230943 232091 . + . ID=gene-AB25_RS23355;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=AB25_RS23355;old_locus_tag=AB25_0216 NZ_JJMC01000001.1 Protein Homology CDS 230943 232091 . + 0 ID=cds-WP_000166360.1;Parent=gene-AB25_RS23355;Dbxref=GenBank:WP_000166360.1;Name=WP_000166360.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414724.1;locus_tag=AB25_RS23355;product=lipid-A-disaccharide synthase;protein_id=WP_000166360.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 232088 232684 . + . ID=gene-AB25_RS23350;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=AB25_RS23350;old_locus_tag=AB25_0217 NZ_JJMC01000001.1 Protein Homology CDS 232088 232684 . + 0 ID=cds-WP_000569401.1;Parent=gene-AB25_RS23350;Dbxref=GenBank:WP_000569401.1;Name=WP_000569401.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308212.1;locus_tag=AB25_RS23350;product=ribonuclease HII;protein_id=WP_000569401.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 232719 236201 . + . ID=gene-AB25_RS23345;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=AB25_RS23345;old_locus_tag=AB25_0218 NZ_JJMC01000001.1 Protein Homology CDS 232719 236201 . + 0 ID=cds-WP_001294757.1;Parent=gene-AB25_RS23345;Dbxref=GenBank:WP_001294757.1;Name=WP_001294757.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414726.1;locus_tag=AB25_RS23345;product=DNA polymerase III subunit alpha;protein_id=WP_001294757.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 236214 237173 . + . ID=gene-AB25_RS23340;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=AB25_RS23340;old_locus_tag=AB25_0219 NZ_JJMC01000001.1 Protein Homology CDS 236214 237173 . + 0 ID=cds-WP_000055741.1;Parent=gene-AB25_RS23340;Dbxref=GenBank:WP_000055741.1;Name=WP_000055741.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132091.1;locus_tag=AB25_RS23340;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WP_000055741.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 237272 239413 . + . ID=gene-AB25_RS23335;Name=ldcC;gbkey=Gene;gene=ldcC;gene_biotype=protein_coding;locus_tag=AB25_RS23335;old_locus_tag=AB25_0220 NZ_JJMC01000001.1 Protein Homology CDS 237272 239413 . + 0 ID=cds-WP_001020973.1;Parent=gene-AB25_RS23335;Dbxref=GenBank:WP_001020973.1;Name=WP_001020973.1;gbkey=CDS;gene=ldcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414728.1;locus_tag=AB25_RS23335;product=lysine decarboxylase LdcC;protein_id=WP_001020973.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 239470 239859 . + . ID=gene-AB25_RS23330;Name=yaeR;gbkey=Gene;gene=yaeR;gene_biotype=protein_coding;locus_tag=AB25_RS23330;old_locus_tag=AB25_0221 NZ_JJMC01000001.1 Protein Homology CDS 239470 239859 . + 0 ID=cds-WP_000901098.1;Parent=gene-AB25_RS23330;Dbxref=GenBank:WP_000901098.1;Name=WP_000901098.1;gbkey=CDS;gene=yaeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308216.2;locus_tag=AB25_RS23330;product=VOC family protein;protein_id=WP_000901098.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 239924 241222 . + . ID=gene-AB25_RS23325;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=AB25_RS23325;old_locus_tag=AB25_0222 NZ_JJMC01000001.1 Protein Homology CDS 239924 241222 . + 0 ID=cds-WP_000176526.1;Parent=gene-AB25_RS23325;Dbxref=GenBank:WP_000176526.1;Name=WP_000176526.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706133.1;locus_tag=AB25_RS23325;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_000176526.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 241271 241531 . - . ID=gene-AB25_RS23320;Name=rof;gbkey=Gene;gene=rof;gene_biotype=protein_coding;locus_tag=AB25_RS23320;old_locus_tag=AB25_0223 NZ_JJMC01000001.1 Protein Homology CDS 241271 241531 . - 0 ID=cds-WP_000062312.1;Parent=gene-AB25_RS23320;Dbxref=GenBank:WP_000062312.1;Name=WP_000062312.1;gbkey=CDS;gene=rof;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706134.1;locus_tag=AB25_RS23320;product=Rho-binding antiterminator;protein_id=WP_000062312.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 241518 241718 . - . ID=gene-AB25_RS23315;Name=yaeP;gbkey=Gene;gene=yaeP;gene_biotype=protein_coding;locus_tag=AB25_RS23315;old_locus_tag=AB25_0224 NZ_JJMC01000001.1 Protein Homology CDS 241518 241718 . - 0 ID=cds-WP_000417058.1;Parent=gene-AB25_RS23315;Dbxref=GenBank:WP_000417058.1;Name=WP_000417058.1;gbkey=CDS;gene=yaeP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133967.1;locus_tag=AB25_RS23315;product=YaeP family protein;protein_id=WP_000417058.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 241884 242429 . + . ID=gene-AB25_RS23310;Name=yaeQ;gbkey=Gene;gene=yaeQ;gene_biotype=protein_coding;locus_tag=AB25_RS23310;old_locus_tag=AB25_0225 NZ_JJMC01000001.1 Protein Homology CDS 241884 242429 . + 0 ID=cds-WP_001185293.1;Parent=gene-AB25_RS23310;Dbxref=GenBank:WP_001185293.1;Name=WP_001185293.1;gbkey=CDS;gene=yaeQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414732.1;locus_tag=AB25_RS23310;product=YaeQ family protein;protein_id=WP_001185293.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 242426 242848 . + . ID=gene-AB25_RS23305;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=AB25_RS23305;old_locus_tag=AB25_0226 NZ_JJMC01000001.1 Protein Homology CDS 242426 242848 . + 0 ID=cds-WP_000635545.1;Parent=gene-AB25_RS23305;Dbxref=GenBank:WP_000635545.1;Name=WP_000635545.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308220.1;locus_tag=AB25_RS23305;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=WP_000635545.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 242862 243572 . + . ID=gene-AB25_RS23300;Name=nlpE;gbkey=Gene;gene=nlpE;gene_biotype=protein_coding;gene_synonym=cutF;locus_tag=AB25_RS23300;old_locus_tag=AB25_0227 NZ_JJMC01000001.1 Protein Homology CDS 242862 243572 . + 0 ID=cds-WP_000239154.1;Parent=gene-AB25_RS23300;Dbxref=GenBank:WP_000239154.1;Name=WP_000239154.1;Note=NlpE%2C an outer membrane lipoprotein%2C interacts directly with CpxA%2C the sensor histidine kinase of the Cpx system for response to envelope stress.;gbkey=CDS;gene=nlpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706138.1;locus_tag=AB25_RS23300;product=envelope stress response activation lipoprotein NlpE;protein_id=WP_000239154.1;transl_table=11 NZ_JJMC01000001.1 RefSeq pseudogene 243727 244550 . - . ID=gene-AB25_RS23290;Name=yaeF;gbkey=Gene;gene=yaeF;gene_biotype=pseudogene;locus_tag=AB25_RS23290;old_locus_tag=AB25_0229;pseudo=true NZ_JJMC01000001.1 Protein Homology CDS 243727 244550 . - 0 ID=cds-AB25_RS23290;Parent=gene-AB25_RS23290;Note=frameshifted;gbkey=CDS;gene=yaeF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414735.4;locus_tag=AB25_RS23290;product=YaeF family permuted papain-like enzyme;pseudo=true;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 244603 246321 . - . ID=gene-AB25_RS23285;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=AB25_RS23285;old_locus_tag=AB25_0230 NZ_JJMC01000001.1 Protein Homology CDS 244603 246321 . - 0 ID=cds-WP_001260716.1;Parent=gene-AB25_RS23285;Dbxref=GenBank:WP_001260716.1;Name=WP_001260716.1;Ontology_term=GO:0006433,GO:0004827,GO:0005524,GO:0005737;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||IEA;go_function=proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133963.1;locus_tag=AB25_RS23285;product=proline--tRNA ligase;protein_id=WP_001260716.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 246433 247140 . - . ID=gene-AB25_RS23280;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=AB25_RS23280;old_locus_tag=AB25_0231 NZ_JJMC01000001.1 Protein Homology CDS 246433 247140 . - 0 ID=cds-WP_000094011.1;Parent=gene-AB25_RS23280;Dbxref=GenBank:WP_000094011.1;Name=WP_000094011.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414737.1;locus_tag=AB25_RS23280;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WP_000094011.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 247137 247541 . - . ID=gene-AB25_RS23275;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=AB25_RS23275;old_locus_tag=AB25_0232 NZ_JJMC01000001.1 Protein Homology CDS 247137 247541 . - 0 ID=cds-WP_001202329.1;Parent=gene-AB25_RS23275;Dbxref=GenBank:WP_001202329.1;Name=WP_001202329.1;gbkey=CDS;gene=rcsF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414738.1;locus_tag=AB25_RS23275;product=Rcs stress response system protein RcsF;protein_id=WP_001202329.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 247659 248474 . - . ID=gene-AB25_RS23270;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=AB25_RS23270;old_locus_tag=AB25_0233 NZ_JJMC01000001.1 Protein Homology CDS 247659 248474 . - 0 ID=cds-WP_000874224.1;Parent=gene-AB25_RS23270;Dbxref=GenBank:WP_000874224.1;Name=WP_000874224.1;gbkey=CDS;gene=metQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706143.1;locus_tag=AB25_RS23270;product=methionine ABC transporter substrate-binding lipoprotein MetQ;protein_id=WP_000874224.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 248514 249167 . - . ID=gene-AB25_RS23265;Name=metI;gbkey=Gene;gene=metI;gene_biotype=protein_coding;locus_tag=AB25_RS23265;old_locus_tag=AB25_0234 NZ_JJMC01000001.1 Protein Homology CDS 248514 249167 . - 0 ID=cds-WP_001294600.1;Parent=gene-AB25_RS23265;Dbxref=GenBank:WP_001294600.1;Name=WP_001294600.1;gbkey=CDS;gene=metI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=AB25_RS23265;product=methionine ABC transporter permease MetI;protein_id=WP_001294600.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 249160 250191 . - . ID=gene-AB25_RS23260;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=AB25_RS23260;old_locus_tag=AB25_0235 NZ_JJMC01000001.1 Protein Homology CDS 249160 250191 . - 0 ID=cds-WP_000593994.1;Parent=gene-AB25_RS23260;Dbxref=GenBank:WP_000593994.1;Name=WP_000593994.1;Ontology_term=GO:0048473,GO:0005524,GO:0033232,GO:0009276;gbkey=CDS;gene=metN;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-methionine transporter activity|0033232||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168731.1;locus_tag=AB25_RS23260;product=methionine ABC transporter ATP-binding protein MetN;protein_id=WP_000593994.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 250379 250954 . + . ID=gene-AB25_RS23255;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=AB25_RS23255;old_locus_tag=AB25_0236 NZ_JJMC01000001.1 Protein Homology CDS 250379 250954 . + 0 ID=cds-WP_001140187.1;Parent=gene-AB25_RS23255;Dbxref=GenBank:WP_001140187.1;Name=WP_001140187.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308229.1;locus_tag=AB25_RS23255;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_001140187.1;transl_table=11 NZ_JJMC01000001.1 RefSeq gene 251318 252302 . + . ID=gene-AB25_RS23250;Name=AB25_RS23250;end_range=252302,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB25_RS23250;old_locus_tag=AB25_0237;partial=true NZ_JJMC01000001.1 cmsearch rRNA 251318 252302 . + . ID=rna-AB25_RS23250;Parent=gene-AB25_RS23250;Dbxref=RFAM:RF00177;end_range=252302,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS23250;partial=true;product=16S ribosomal RNA NZ_JJMC01000001.1 cmsearch exon 251318 252302 . + . ID=exon-AB25_RS23250-1;Parent=rna-AB25_RS23250;Dbxref=RFAM:RF00177;end_range=252302,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS23250;partial=true;product=16S ribosomal RNA ##sequence-region NZ_JJMC01000002.1 1 23703 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000002.1 RefSeq region 1 23703 . + . ID=NZ_JJMC01000002.1:1..23703;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000002.1 RefSeq gene 23 2926 . + . ID=gene-AB25_RS23245;Name=AB25_RS23245;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB25_RS23245;old_locus_tag=AB25_0238 NZ_JJMC01000002.1 cmsearch rRNA 23 2926 . + . ID=rna-AB25_RS23245;Parent=gene-AB25_RS23245;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS23245;product=23S ribosomal RNA NZ_JJMC01000002.1 cmsearch exon 23 2926 . + . ID=exon-AB25_RS23245-1;Parent=rna-AB25_RS23245;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS23245;product=23S ribosomal RNA NZ_JJMC01000002.1 RefSeq gene 3021 3136 . + . ID=gene-AB25_RS23240;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AB25_RS23240;old_locus_tag=AB25_0240 NZ_JJMC01000002.1 cmsearch rRNA 3021 3136 . + . ID=rna-AB25_RS23240;Parent=gene-AB25_RS23240;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS23240;product=5S ribosomal RNA NZ_JJMC01000002.1 cmsearch exon 3021 3136 . + . ID=exon-AB25_RS23240-1;Parent=rna-AB25_RS23240;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS23240;product=5S ribosomal RNA NZ_JJMC01000002.1 RefSeq gene 3191 3267 . + . ID=gene-AB25_RS23235;Name=AB25_RS23235;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS23235;old_locus_tag=AB25_0241 NZ_JJMC01000002.1 tRNAscan-SE tRNA 3191 3267 . + . ID=rna-AB25_RS23235;Parent=gene-AB25_RS23235;anticodon=(pos:3225..3227);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS23235;product=tRNA-Asp NZ_JJMC01000002.1 tRNAscan-SE exon 3191 3267 . + . ID=exon-AB25_RS23235-1;Parent=rna-AB25_RS23235;anticodon=(pos:3225..3227);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS23235;product=tRNA-Asp NZ_JJMC01000002.1 RefSeq gene 3430 4233 . + . ID=gene-AB25_RS23230;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=AB25_RS23230;old_locus_tag=AB25_0242 NZ_JJMC01000002.1 Protein Homology CDS 3430 4233 . + 0 ID=cds-WP_000997010.1;Parent=gene-AB25_RS23230;Dbxref=GenBank:WP_000997010.1;Name=WP_000997010.1;Ontology_term=GO:0047834;gbkey=CDS;gene=dkgB;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414743.1;locus_tag=AB25_RS23230;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=WP_000997010.1;transl_table=11 NZ_JJMC01000002.1 RefSeq gene 4230 5144 . - . ID=gene-AB25_RS23225;Name=yafC;gbkey=Gene;gene=yafC;gene_biotype=protein_coding;locus_tag=AB25_RS23225;old_locus_tag=AB25_0243 NZ_JJMC01000002.1 Protein Homology CDS 4230 5144 . - 0 ID=cds-WP_000648601.1;Parent=gene-AB25_RS23225;Dbxref=GenBank:WP_000648601.1;Name=WP_000648601.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yafC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414744.1;locus_tag=AB25_RS23225;product=DNA-binding transcriptional regulator YafC;protein_id=WP_000648601.1;transl_table=11 NZ_JJMC01000002.1 RefSeq gene 5385 6185 . + . ID=gene-AB25_RS23220;Name=yafD;gbkey=Gene;gene=yafD;gene_biotype=protein_coding;locus_tag=AB25_RS23220;old_locus_tag=AB25_0244 NZ_JJMC01000002.1 Protein Homology CDS 5385 6185 . + 0 ID=cds-WP_001230983.1;Parent=gene-AB25_RS23220;Dbxref=GenBank:WP_001230983.1;Name=WP_001230983.1;gbkey=CDS;gene=yafD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414745.1;locus_tag=AB25_RS23220;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_001230983.1;transl_table=11 NZ_JJMC01000002.1 RefSeq gene 6263 7033 . + . ID=gene-AB25_RS23215;Name=AB25_RS23215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS23215;old_locus_tag=AB25_0245 NZ_JJMC01000002.1 Protein Homology CDS 6263 7033 . + 0 ID=cds-WP_001591216.1;Parent=gene-AB25_RS23215;Dbxref=GenBank:WP_001591216.1;Name=WP_001591216.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308233.1;locus_tag=AB25_RS23215;product=class I SAM-dependent methyltransferase;protein_id=WP_001591216.1;transl_table=11 NZ_JJMC01000002.1 RefSeq gene 7081 8439 . - . ID=gene-AB25_RS23210;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;locus_tag=AB25_RS23210;old_locus_tag=AB25_0246 NZ_JJMC01000002.1 Protein Homology CDS 7081 8439 . - 0 ID=cds-WP_000644685.1;Parent=gene-AB25_RS23210;Dbxref=GenBank:WP_000644685.1;Name=WP_000644685.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltD;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414747.1;locus_tag=AB25_RS23210;product=murein transglycosylase D;protein_id=WP_000644685.1;transl_table=11 NZ_JJMC01000002.1 RefSeq gene 8511 9266 . - . ID=gene-AB25_RS23205;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=AB25_RS23205;old_locus_tag=AB25_0247 NZ_JJMC01000002.1 Protein Homology CDS 8511 9266 . - 0 ID=cds-WP_001052721.1;Parent=gene-AB25_RS23205;Dbxref=GenBank:WP_001052721.1;Name=WP_001052721.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308235.1;locus_tag=AB25_RS23205;product=hydroxyacylglutathione hydrolase;protein_id=WP_001052721.1;transl_table=11 NZ_JJMC01000002.1 RefSeq gene 9300 10022 . + . ID=gene-AB25_RS23200;Name=yafS;gbkey=Gene;gene=yafS;gene_biotype=protein_coding;locus_tag=AB25_RS23200;old_locus_tag=AB25_0248 NZ_JJMC01000002.1 Protein Homology CDS 9300 10022 . + 0 ID=cds-WP_001295200.1;Parent=gene-AB25_RS23200;Dbxref=GenBank:WP_001295200.1;Name=WP_001295200.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;gene=yafS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414749.2;locus_tag=AB25_RS23200;product=class I SAM-dependent methyltransferase;protein_id=WP_001295200.1;transl_table=11 NZ_JJMC01000002.1 RefSeq gene 10019 10486 . - . ID=gene-AB25_RS23195;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=AB25_RS23195;old_locus_tag=AB25_0249 NZ_JJMC01000002.1 Protein Homology CDS 10019 10486 . - 0 ID=cds-WP_000917883.1;Parent=gene-AB25_RS23195;Dbxref=GenBank:WP_000917883.1;Name=WP_000917883.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308237.1;locus_tag=AB25_RS23195;product=ribonuclease HI;protein_id=WP_000917883.1;transl_table=11 NZ_JJMC01000002.1 RefSeq gene 10551 11282 . + . ID=gene-AB25_RS23190;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=AB25_RS23190;old_locus_tag=AB25_0250 NZ_JJMC01000002.1 Protein Homology CDS 10551 11282 . + 0 ID=cds-WP_001300756.1;Parent=gene-AB25_RS23190;Dbxref=GenBank:WP_001300756.1;Name=WP_001300756.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706156.2;locus_tag=AB25_RS23190;product=DNA polymerase III subunit epsilon;protein_id=WP_001300756.1;transl_table=11 NZ_JJMC01000002.1 RefSeq gene 11415 11491 . + . ID=gene-AB25_RS23185;Name=AB25_RS23185;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS23185;old_locus_tag=AB25_0251 NZ_JJMC01000002.1 tRNAscan-SE tRNA 11415 11491 . + . ID=rna-AB25_RS23185;Parent=gene-AB25_RS23185;anticodon=(pos:11449..11451);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS23185;product=tRNA-Asp NZ_JJMC01000002.1 tRNAscan-SE exon 11415 11491 . + . ID=exon-AB25_RS23185-1;Parent=rna-AB25_RS23185;anticodon=(pos:11449..11451);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS23185;product=tRNA-Asp NZ_JJMC01000002.1 RefSeq gene 11819 12604 . + . ID=gene-AB25_RS23180;Name=yafT;gbkey=Gene;gene=yafT;gene_biotype=protein_coding;locus_tag=AB25_RS23180;old_locus_tag=AB25_0252 NZ_JJMC01000002.1 Protein Homology CDS 11819 12604 . + 0 ID=cds-WP_001086142.1;Parent=gene-AB25_RS23180;Dbxref=GenBank:WP_001086142.1;Name=WP_001086142.1;gbkey=CDS;gene=yafT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414752.1;locus_tag=AB25_RS23180;product=aminopeptidase;protein_id=WP_001086142.1;transl_table=11 NZ_JJMC01000002.1 RefSeq gene 12741 13220 . - . ID=gene-AB25_RS0124415;Name=ykfM;gbkey=Gene;gene=ykfM;gene_biotype=protein_coding;locus_tag=AB25_RS0124415 NZ_JJMC01000002.1 Protein Homology CDS 12741 13220 . - 0 ID=cds-WP_001236652.1;Parent=gene-AB25_RS0124415;Dbxref=GenBank:WP_001236652.1;Name=WP_001236652.1;gbkey=CDS;gene=ykfM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165307.1;locus_tag=AB25_RS0124415;product=protein YkfM;protein_id=WP_001236652.1;transl_table=11 NZ_JJMC01000002.1 RefSeq gene 13230 14144 . - . ID=gene-AB25_RS23175;Name=AB25_RS23175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS23175;old_locus_tag=AB25_0253 NZ_JJMC01000002.1 Protein Homology CDS 13230 14144 . - 0 ID=cds-WP_000908057.1;Parent=gene-AB25_RS23175;Dbxref=GenBank:WP_000908057.1;Name=WP_000908057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000908053.1;locus_tag=AB25_RS23175;product=hypothetical protein;protein_id=WP_000908057.1;transl_table=11 NZ_JJMC01000002.1 RefSeq gene 14188 14670 . - . ID=gene-AB25_RS23170;Name=AB25_RS23170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS23170;old_locus_tag=AB25_0254 NZ_JJMC01000002.1 Protein Homology CDS 14188 14670 . - 0 ID=cds-WP_001284199.1;Parent=gene-AB25_RS23170;Dbxref=GenBank:WP_001284199.1;Name=WP_001284199.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001284197.1;locus_tag=AB25_RS23170;product=Hcp family type VI secretion system effector;protein_id=WP_001284199.1;transl_table=11 NZ_JJMC01000002.1 RefSeq pseudogene 14694 15134 . - . ID=gene-AB25_RS23165;Name=AB25_RS23165;end_range=15134,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS23165;old_locus_tag=AB25_0255;partial=true;pseudo=true NZ_JJMC01000002.1 Protein Homology CDS 14694 15134 . - 0 ID=cds-AB25_RS23165;Parent=gene-AB25_RS23165;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=15134,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001087757.1;locus_tag=AB25_RS23165;partial=true;product=VasL domain-containing protein;pseudo=true;transl_table=11 NZ_JJMC01000002.1 RefSeq pseudogene 15137 16714 . - . ID=gene-AB25_RS23160;Name=tssM;gbkey=Gene;gene=tssM;gene_biotype=pseudogene;locus_tag=AB25_RS23160;old_locus_tag=AB25_0256;partial=true;pseudo=true;start_range=.,15137 NZ_JJMC01000002.1 Protein Homology CDS 15137 16714 . - 0 ID=cds-AB25_RS23160;Parent=gene-AB25_RS23160;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0033103;gbkey=CDS;gene=tssM;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308245.2;locus_tag=AB25_RS23160;partial=true;product=type VI secretion system membrane subunit TssM;pseudo=true;start_range=.,15137;transl_table=11 NZ_JJMC01000002.1 RefSeq gene 16823 18235 . - . ID=gene-AB25_RS23155;Name=tssA;gbkey=Gene;gene=tssA;gene_biotype=protein_coding;locus_tag=AB25_RS23155;old_locus_tag=AB25_0257 NZ_JJMC01000002.1 Protein Homology CDS 16823 18235 . - 0 ID=cds-WP_001240524.1;Parent=gene-AB25_RS23155;Dbxref=GenBank:WP_001240524.1;Name=WP_001240524.1;gbkey=CDS;gene=tssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743361.1;locus_tag=AB25_RS23155;product=type VI secretion system protein TssA;protein_id=WP_001240524.1;transl_table=11 NZ_JJMC01000002.1 RefSeq pseudogene 18240 18344 . - . ID=gene-AB25_RS32890;Name=AB25_RS32890;end_range=18344,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32890;partial=true;pseudo=true NZ_JJMC01000002.1 Protein Homology CDS 18240 18344 . - 0 ID=cds-AB25_RS32890;Parent=gene-AB25_RS32890;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=18344,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308249.1;locus_tag=AB25_RS32890;partial=true;product=type VI secretion system-associated protein VasI;pseudo=true;transl_table=11 NZ_JJMC01000002.1 RefSeq pseudogene 18335 19712 . - . ID=gene-AB25_RS23150;Name=AB25_RS23150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS23150;old_locus_tag=AB25_0258;partial=true;pseudo=true;start_range=.,18335 NZ_JJMC01000002.1 Protein Homology CDS 18335 19712 . - 0 ID=cds-AB25_RS23150;Parent=gene-AB25_RS23150;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308250.1;locus_tag=AB25_RS23150;partial=true;product=AAA family ATPase;pseudo=true;start_range=.,18335;transl_table=11 NZ_JJMC01000002.1 RefSeq gene 19721 20638 . - . ID=gene-AB25_RS0124420;Name=icmH;gbkey=Gene;gene=icmH;gene_biotype=protein_coding;locus_tag=AB25_RS0124420;old_locus_tag=AB25_0259 NZ_JJMC01000002.1 Protein Homology CDS 19721 20638 . - 0 ID=cds-WP_001391007.1;Parent=gene-AB25_RS0124420;Dbxref=GenBank:WP_001391007.1;Name=WP_001391007.1;gbkey=CDS;gene=icmH;inference=COORDINATES: protein motif:HMM:NF038228.1;locus_tag=AB25_RS0124420;product=type IVB secretion system protein IcmH/DotU;protein_id=WP_001391007.1;transl_table=11 NZ_JJMC01000002.1 RefSeq pseudogene 20635 21480 . - . ID=gene-AB25_RS23145;Name=tagH;end_range=21480,.;gbkey=Gene;gene=tagH;gene_biotype=pseudogene;locus_tag=AB25_RS23145;old_locus_tag=AB25_0260;partial=true;pseudo=true NZ_JJMC01000002.1 Protein Homology CDS 20635 21480 . - 0 ID=cds-AB25_RS23145;Parent=gene-AB25_RS23145;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0033103;end_range=21480,.;gbkey=CDS;gene=tagH;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308254.1;locus_tag=AB25_RS23145;partial=true;product=type VI secretion system-associated FHA domain protein TagH;pseudo=true;transl_table=11 NZ_JJMC01000002.1 RefSeq pseudogene 21479 22054 . + . ID=gene-AB25_RS29990;Name=AB25_RS29990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS29990;partial=true;pseudo=true;start_range=.,21479 NZ_JJMC01000002.1 Protein Homology CDS 21479 22054 . + 0 ID=cds-AB25_RS29990;Parent=gene-AB25_RS29990;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000509087.1;locus_tag=AB25_RS29990;partial=true;product=type IV secretion protein Rhs;pseudo=true;start_range=.,21479;transl_table=11 NZ_JJMC01000002.1 RefSeq gene 22066 22515 . + . ID=gene-AB25_RS23135;Name=AB25_RS23135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS23135;old_locus_tag=AB25_0262 NZ_JJMC01000002.1 Protein Homology CDS 22066 22515 . + 0 ID=cds-WP_000978828.1;Parent=gene-AB25_RS23135;Dbxref=GenBank:WP_000978828.1;Name=WP_000978828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000978828.1;locus_tag=AB25_RS23135;product=RHS element protein dsORF-h1;protein_id=WP_000978828.1;transl_table=11 NZ_JJMC01000002.1 RefSeq pseudogene 22776 23703 . + . ID=gene-AB25_RS23130;Name=AB25_RS23130;end_range=23703,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS23130;old_locus_tag=AB25_0263;partial=true;pseudo=true NZ_JJMC01000002.1 Protein Homology CDS 22776 23703 . + 0 ID=cds-AB25_RS23130;Parent=gene-AB25_RS23130;Note=internal stop%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;end_range=23703,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AB25_RS23130;partial=true;product=ISAs1 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJMC01000003.1 1 12170 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000003.1 RefSeq region 1 12170 . + . ID=NZ_JJMC01000003.1:1..12170;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000003.1 RefSeq gene 1 249 . - . ID=gene-AB25_RS27530;Name=AB25_RS27530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS27530;old_locus_tag=AB25_0264;partial=true;start_range=.,1 NZ_JJMC01000003.1 Protein Homology CDS 1 249 . - 0 ID=cds-WP_001395527.1;Parent=gene-AB25_RS27530;Dbxref=GenBank:WP_001395527.1;Name=WP_001395527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AB25_RS27530;partial=true;product=IS1-like element transposase;protein_id=WP_001395527.1;start_range=.,1;transl_table=11 NZ_JJMC01000003.1 RefSeq pseudogene 461 562 . + . ID=gene-AB25_RS31930;Name=AB25_RS31930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS31930;old_locus_tag=AB25_0265;partial=true;pseudo=true;start_range=.,461 NZ_JJMC01000003.1 Protein Homology CDS 461 562 . + 0 ID=cds-AB25_RS31930;Parent=gene-AB25_RS31930;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=AB25_RS31930;partial=true;product=IS6 family transposase;pseudo=true;start_range=.,461;transl_table=11 NZ_JJMC01000003.1 RefSeq pseudogene 700 870 . + . ID=gene-AB25_RS23125;Name=AB25_RS23125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS23125;old_locus_tag=AB25_0266;partial=true;pseudo=true;start_range=.,700 NZ_JJMC01000003.1 Protein Homology CDS 700 870 . + 0 ID=cds-AB25_RS23125;Parent=gene-AB25_RS23125;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003846857.1;locus_tag=AB25_RS23125;partial=true;product=DsbA family protein;pseudo=true;start_range=.,700;transl_table=11 NZ_JJMC01000003.1 RefSeq gene 860 1366 . + . ID=gene-AB25_RS23120;Name=AB25_RS23120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS23120;old_locus_tag=AB25_0267 NZ_JJMC01000003.1 Protein Homology CDS 860 1366 . + 0 ID=cds-WP_000949452.1;Parent=gene-AB25_RS23120;Dbxref=GenBank:WP_000949452.1;Name=WP_000949452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001529108.1;locus_tag=AB25_RS23120;product=protein disulfide oxidoreductase;protein_id=WP_000949452.1;transl_table=11 NZ_JJMC01000003.1 RefSeq gene 1549 2364 . + . ID=gene-AB25_RS23115;Name=AB25_RS23115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS23115;old_locus_tag=AB25_0268 NZ_JJMC01000003.1 Protein Homology CDS 1549 2364 . + 0 ID=cds-WP_012372823.1;Parent=gene-AB25_RS23115;Dbxref=GenBank:WP_012372823.1;Name=WP_012372823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014640325.1;locus_tag=AB25_RS23115;product=Na(+)-translocating NADH-quinone reductase subunit C;protein_id=WP_012372823.1;transl_table=11 NZ_JJMC01000003.1 RefSeq gene 2711 4597 . + . ID=gene-AB25_RS23110;Name=AB25_RS23110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS23110;old_locus_tag=AB25_0271 NZ_JJMC01000003.1 Protein Homology CDS 2711 4597 . + 0 ID=cds-WP_000118029.1;Parent=gene-AB25_RS23110;Dbxref=GenBank:WP_000118029.1;Name=WP_000118029.1;Ontology_term=GO:0034755,GO:0005381,GO:0016020,GO:0033573;gbkey=CDS;go_component=membrane|0016020||IEA,high-affinity iron permease complex|0033573||IEA;go_function=iron ion transmembrane transporter activity|0005381||IEA;go_process=iron ion transmembrane transport|0034755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001495622.1;locus_tag=AB25_RS23110;product=FTR1 family iron permease;protein_id=WP_000118029.1;transl_table=11 NZ_JJMC01000003.1 RefSeq gene 4638 5165 . + . ID=gene-AB25_RS23105;Name=AB25_RS23105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS23105;old_locus_tag=AB25_0272 NZ_JJMC01000003.1 Protein Homology CDS 4638 5165 . + 0 ID=cds-WP_000178050.1;Parent=gene-AB25_RS23105;Dbxref=GenBank:WP_000178050.1;Name=WP_000178050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016674077.1;locus_tag=AB25_RS23105;product=iron transporter;protein_id=WP_000178050.1;transl_table=11 NZ_JJMC01000003.1 RefSeq gene 5269 6648 . + . ID=gene-AB25_RS23100;Name=AB25_RS23100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS23100;old_locus_tag=AB25_0273 NZ_JJMC01000003.1 Protein Homology CDS 5269 6648 . + 0 ID=cds-WP_000119836.1;Parent=gene-AB25_RS23100;Dbxref=GenBank:WP_000119836.1;Name=WP_000119836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003836820.1;locus_tag=AB25_RS23100;product=Fe-S-containing protein;protein_id=WP_000119836.1;transl_table=11 NZ_JJMC01000003.1 RefSeq gene 6651 7934 . + . ID=gene-AB25_RS23095;Name=AB25_RS23095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS23095;old_locus_tag=AB25_0274 NZ_JJMC01000003.1 Protein Homology CDS 6651 7934 . + 0 ID=cds-WP_000964653.1;Parent=gene-AB25_RS23095;Dbxref=GenBank:WP_000964653.1;Name=WP_000964653.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906231.1;locus_tag=AB25_RS23095;product=ABC transporter permease;protein_id=WP_000964653.1;transl_table=11 NZ_JJMC01000003.1 RefSeq gene 7924 9054 . + . ID=gene-AB25_RS23090;Name=AB25_RS23090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS23090;old_locus_tag=AB25_0275 NZ_JJMC01000003.1 Protein Homology CDS 7924 9054 . + 0 ID=cds-WP_000729220.1;Parent=gene-AB25_RS23090;Dbxref=GenBank:WP_000729220.1;Name=WP_000729220.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729219.1;locus_tag=AB25_RS23090;product=ABC transporter permease;protein_id=WP_000729220.1;transl_table=11 NZ_JJMC01000003.1 RefSeq gene 9059 9754 . + . ID=gene-AB25_RS23085;Name=AB25_RS23085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS23085;old_locus_tag=AB25_0276 NZ_JJMC01000003.1 Protein Homology CDS 9059 9754 . + 0 ID=cds-WP_000117262.1;Parent=gene-AB25_RS23085;Dbxref=GenBank:WP_000117262.1;Name=WP_000117262.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004863043.1;locus_tag=AB25_RS23085;product=ABC transporter ATP-binding protein;protein_id=WP_000117262.1;transl_table=11 NZ_JJMC01000003.1 RefSeq gene 9741 10226 . + . ID=gene-AB25_RS23080;Name=AB25_RS23080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS23080;old_locus_tag=AB25_0277 NZ_JJMC01000003.1 Protein Homology CDS 9741 10226 . + 0 ID=cds-WP_001267177.1;Parent=gene-AB25_RS23080;Dbxref=GenBank:WP_001267177.1;Name=WP_001267177.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122129.1;locus_tag=AB25_RS23080;product=TlpA family protein disulfide reductase;protein_id=WP_001267177.1;transl_table=11 NZ_JJMC01000003.1 RefSeq gene 10251 10736 . + . ID=gene-AB25_RS23075;Name=AB25_RS23075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS23075;old_locus_tag=AB25_0278 NZ_JJMC01000003.1 Protein Homology CDS 10251 10736 . + 0 ID=cds-WP_000874189.1;Parent=gene-AB25_RS23075;Dbxref=GenBank:WP_000874189.1;Name=WP_000874189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122128.1;locus_tag=AB25_RS23075;product=hypothetical protein;protein_id=WP_000874189.1;transl_table=11 NZ_JJMC01000003.1 RefSeq pseudogene 10858 11397 . + . ID=gene-AB25_RS23070;Name=AB25_RS23070;end_range=11397,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS23070;old_locus_tag=AB25_0279;partial=true;pseudo=true NZ_JJMC01000003.1 Protein Homology CDS 10858 11397 . + 0 ID=cds-AB25_RS23070;Parent=gene-AB25_RS23070;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=11397,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309185.1;locus_tag=AB25_RS23070;partial=true;product=histidine-type phosphatase;pseudo=true;transl_table=11 NZ_JJMC01000003.1 RefSeq gene 11446 12150 . - . ID=gene-AB25_RS23065;Name=AB25_RS23065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS23065;old_locus_tag=AB25_0280 NZ_JJMC01000003.1 Protein Homology CDS 11446 12150 . - 0 ID=cds-WP_001067834.1;Parent=gene-AB25_RS23065;Dbxref=GenBank:WP_001067834.1;Name=WP_001067834.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=AB25_RS23065;product=IS6-like element IS26 family transposase;protein_id=WP_001067834.1;transl_table=11 ##sequence-region NZ_JJMC01000004.1 1 1008 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000004.1 RefSeq region 1 1008 . + . ID=NZ_JJMC01000004.1:1..1008;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000004.1 RefSeq gene 1 458 . + . ID=gene-AB25_RS23060;Name=AB25_RS23060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS23060;old_locus_tag=AB25_0281;partial=true;start_range=.,1 NZ_JJMC01000004.1 Protein Homology CDS 1 458 . + 2 ID=cds-WP_032295834.1;Parent=gene-AB25_RS23060;Dbxref=GenBank:WP_032295834.1;Name=WP_032295834.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309326.1;locus_tag=AB25_RS23060;partial=true;product=tyrosine-type recombinase/integrase;protein_id=WP_032295834.1;start_range=.,1;transl_table=11 NZ_JJMC01000004.1 RefSeq pseudogene 469 1008 . - . ID=gene-AB25_RS23055;Name=AB25_RS23055;end_range=1008,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS23055;old_locus_tag=AB25_0282;partial=true;pseudo=true NZ_JJMC01000004.1 Protein Homology CDS 469 1008 . - 1 ID=cds-AB25_RS23055;Parent=gene-AB25_RS23055;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=1008,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AB25_RS23055;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJMC01000005.1 1 9891 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000005.1 RefSeq region 1 9891 . + . ID=NZ_JJMC01000005.1:1..9891;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000005.1 RefSeq gene 1 249 . - . ID=gene-AB25_RS23050;Name=AB25_RS23050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS23050;old_locus_tag=AB25_0283;partial=true;start_range=.,1 NZ_JJMC01000005.1 Protein Homology CDS 1 249 . - 0 ID=cds-WP_001395527.1-2;Parent=gene-AB25_RS23050;Dbxref=GenBank:WP_001395527.1;Name=WP_001395527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AB25_RS23050;partial=true;product=IS1-like element transposase;protein_id=WP_001395527.1;start_range=.,1;transl_table=11 NZ_JJMC01000005.1 RefSeq gene 278 1588 . - . ID=gene-AB25_RS23045;Name=AB25_RS23045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS23045;old_locus_tag=AB25_0284 NZ_JJMC01000005.1 Protein Homology CDS 278 1588 . - 0 ID=cds-WP_001262765.1;Parent=gene-AB25_RS23045;Dbxref=GenBank:WP_001262765.1;Name=WP_001262765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001262762.1;locus_tag=AB25_RS23045;product=GmrSD restriction endonuclease domain-containing protein;protein_id=WP_001262765.1;transl_table=11 NZ_JJMC01000005.1 RefSeq gene 1873 2205 . - . ID=gene-AB25_RS23040;Name=pemK-mt;gbkey=Gene;gene=pemK-mt;gene_biotype=protein_coding;locus_tag=AB25_RS23040;old_locus_tag=AB25_0285 NZ_JJMC01000005.1 Protein Homology CDS 1873 2205 . - 0 ID=cds-WP_000439434.1;Parent=gene-AB25_RS23040;Dbxref=GenBank:WP_000439434.1;Name=WP_000439434.1;gbkey=CDS;gene=pemK-mt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004206891.1;locus_tag=AB25_RS23040;product=type II toxin-antitoxin system toxin endoribonuclease PemK-mt;protein_id=WP_000439434.1;transl_table=11 NZ_JJMC01000005.1 RefSeq gene 2207 2464 . - . ID=gene-AB25_RS31585;Name=pemI;gbkey=Gene;gene=pemI;gene_biotype=protein_coding;locus_tag=AB25_RS31585;old_locus_tag=AB25_0286 NZ_JJMC01000005.1 Protein Homology CDS 2207 2464 . - 0 ID=cds-WP_000557619.1;Parent=gene-AB25_RS31585;Dbxref=GenBank:WP_000557619.1;Name=WP_000557619.1;gbkey=CDS;gene=pemI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000557619.1;locus_tag=AB25_RS31585;product=type II toxin-antitoxin system antitoxin PemI;protein_id=WP_000557619.1;transl_table=11 NZ_JJMC01000005.1 RefSeq gene 2557 3210 . - . ID=gene-AB25_RS23030;Name=AB25_RS23030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS23030;old_locus_tag=AB25_0287 NZ_JJMC01000005.1 Protein Homology CDS 2557 3210 . - 0 ID=cds-WP_000616807.1;Parent=gene-AB25_RS23030;Dbxref=GenBank:WP_000616807.1;Name=WP_000616807.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001757010.1;locus_tag=AB25_RS23030;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_000616807.1;transl_table=11 NZ_JJMC01000005.1 RefSeq gene 4149 5006 . - . ID=gene-AB25_RS23025;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=AB25_RS23025;old_locus_tag=AB25_0290 NZ_JJMC01000005.1 Protein Homology CDS 4149 5006 . - 0 ID=cds-WP_000774296.1;Parent=gene-AB25_RS23025;Dbxref=GenBank:WP_000774296.1;Name=WP_000774296.1;Ontology_term=GO:0006276;gbkey=CDS;gene=repA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052675.1;locus_tag=AB25_RS23025;product=incFII family plasmid replication initiator RepA;protein_id=WP_000774296.1;transl_table=11 NZ_JJMC01000005.1 RefSeq gene 4999 5481 . - . ID=gene-AB25_RS0124440;Name=AB25_RS0124440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0124440 NZ_JJMC01000005.1 Protein Homology CDS 4999 5481 . - 0 ID=cds-WP_001273588.1;Parent=gene-AB25_RS0124440;Dbxref=GenBank:WP_001273588.1;Name=WP_001273588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001273588.1;locus_tag=AB25_RS0124440;product=hypothetical protein;protein_id=WP_001273588.1;transl_table=11 NZ_JJMC01000005.1 RefSeq gene 5474 5548 . - . ID=gene-AB25_RS32785;Name=tap;gbkey=Gene;gene=tap;gene_biotype=protein_coding;locus_tag=AB25_RS32785 NZ_JJMC01000005.1 Protein Homology CDS 5474 5548 . - 0 ID=cds-WP_001442103.1;Parent=gene-AB25_RS32785;Dbxref=GenBank:WP_001442103.1;Name=WP_001442103.1;Ontology_term=GO:0006276,GO:0031556;gbkey=CDS;gene=tap;go_process=plasmid maintenance|0006276||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001442103.1;locus_tag=AB25_RS32785;product=RepA leader peptide Tap;protein_id=WP_001442103.1;transl_table=11 NZ_JJMC01000005.1 RefSeq gene 5780 6037 . - . ID=gene-AB25_RS23020;Name=AB25_RS23020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS23020;old_locus_tag=AB25_0291 NZ_JJMC01000005.1 Protein Homology CDS 5780 6037 . - 0 ID=cds-WP_000083845.1;Parent=gene-AB25_RS23020;Dbxref=GenBank:WP_000083845.1;Name=WP_000083845.1;Ontology_term=GO:0006276;gbkey=CDS;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001297746.1;locus_tag=AB25_RS23020;product=replication regulatory protein RepA;protein_id=WP_000083845.1;transl_table=11 NZ_JJMC01000005.1 RefSeq gene 6321 6527 . - . ID=gene-AB25_RS0124450;Name=AB25_RS0124450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0124450;old_locus_tag=AB25_0292 NZ_JJMC01000005.1 Protein Homology CDS 6321 6527 . - 0 ID=cds-WP_001351576.1;Parent=gene-AB25_RS0124450;Dbxref=GenBank:WP_001351576.1;Name=WP_001351576.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF013968.6;locus_tag=AB25_RS0124450;product=Hok/Gef family protein;protein_id=WP_001351576.1;transl_table=11 NZ_JJMC01000005.1 RefSeq pseudogene 6831 6905 . - . ID=gene-AB25_RS31935;Name=AB25_RS31935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS31935;partial=true;pseudo=true;start_range=.,6831 NZ_JJMC01000005.1 Protein Homology CDS 6831 6905 . - 0 ID=cds-AB25_RS31935;Parent=gene-AB25_RS31935;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052672.1;locus_tag=AB25_RS31935;partial=true;product=thermonuclease family protein;pseudo=true;start_range=.,6831;transl_table=11 NZ_JJMC01000005.1 RefSeq gene 7151 7363 . - . ID=gene-AB25_RS0124455;Name=AB25_RS0124455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0124455 NZ_JJMC01000005.1 Protein Homology CDS 7151 7363 . - 0 ID=cds-WP_001299730.1;Parent=gene-AB25_RS0124455;Dbxref=GenBank:WP_001299730.1;Name=WP_001299730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858385.1;locus_tag=AB25_RS0124455;product=ANR family transcriptional regulator;protein_id=WP_001299730.1;transl_table=11 NZ_JJMC01000005.1 RefSeq gene 7499 8059 . - . ID=gene-AB25_RS23015;Name=AB25_RS23015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS23015;old_locus_tag=AB25_0294 NZ_JJMC01000005.1 Protein Homology CDS 7499 8059 . - 0 ID=cds-WP_000139315.1;Parent=gene-AB25_RS23015;Dbxref=GenBank:WP_000139315.1;Name=WP_000139315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052671.1;locus_tag=AB25_RS23015;product=fertility inhibition protein FinO;protein_id=WP_000139315.1;transl_table=11 NZ_JJMC01000005.1 RefSeq gene 8162 9022 . - . ID=gene-AB25_RS23010;Name=uilS;gbkey=Gene;gene=uilS;gene_biotype=protein_coding;locus_tag=AB25_RS23010;old_locus_tag=AB25_0295 NZ_JJMC01000005.1 Protein Homology CDS 8162 9022 . - 0 ID=cds-WP_000704513.1;Parent=gene-AB25_RS23010;Dbxref=GenBank:WP_000704513.1;Name=WP_000704513.1;gbkey=CDS;gene=uilS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052670.1;locus_tag=AB25_RS23010;product=UilS family quorum-quenching N-acyl-homoserine lactonase;protein_id=WP_000704513.1;transl_table=11 NZ_JJMC01000005.1 RefSeq pseudogene 9081 9221 . - . ID=gene-AB25_RS30945;Name=AB25_RS30945;end_range=9221,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS30945;old_locus_tag=AB25_0296;partial=true;pseudo=true NZ_JJMC01000005.1 Protein Homology CDS 9081 9221 . - 0 ID=cds-AB25_RS30945;Parent=gene-AB25_RS30945;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=9221,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052669.1;locus_tag=AB25_RS30945;partial=true;product=TraX family protein;pseudo=true;transl_table=11 NZ_JJMC01000005.1 RefSeq pseudogene 9242 9646 . - . ID=gene-AB25_RS23005;Name=AB25_RS23005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS23005;old_locus_tag=AB25_0297;partial=true;pseudo=true;start_range=.,9242 NZ_JJMC01000005.1 Protein Homology CDS 9242 9646 . - 0 ID=cds-AB25_RS23005;Parent=gene-AB25_RS23005;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001553749.1;locus_tag=AB25_RS23005;partial=true;product=F-type conjugal transfer pilus assembly protein TraB;pseudo=true;start_range=.,9242;transl_table=11 NZ_JJMC01000005.1 RefSeq pseudogene 9646 9891 . - . ID=gene-AB25_RS0124460;Name=AB25_RS0124460;end_range=9891,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS0124460;old_locus_tag=AB25_0298;partial=true;pseudo=true NZ_JJMC01000005.1 Protein Homology CDS 9646 9891 . - 0 ID=cds-AB25_RS0124460;Parent=gene-AB25_RS0124460;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=9891,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490566.1;locus_tag=AB25_RS0124460;partial=true;product=TraK domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_JJMC01000006.1 1 302130 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000006.1 RefSeq region 1 302130 . + . ID=NZ_JJMC01000006.1:1..302130;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000006.1 RefSeq gene 64 1200 . + . ID=gene-AB25_RS23000;Name=AB25_RS23000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS23000;old_locus_tag=AB25_0299 NZ_JJMC01000006.1 Protein Homology CDS 64 1200 . + 0 ID=cds-WP_032295836.1;Parent=gene-AB25_RS23000;Dbxref=GenBank:WP_032295836.1;Name=WP_032295836.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AB25_RS23000;product=ISAs1-like element ISEc1 family transposase;protein_id=WP_032295836.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 1242 2012 . - . ID=gene-AB25_RS22995;Name=yafV;gbkey=Gene;gene=yafV;gene_biotype=protein_coding;locus_tag=AB25_RS22995;old_locus_tag=AB25_0300 NZ_JJMC01000006.1 Protein Homology CDS 1242 2012 . - 0 ID=cds-WP_001118055.1;Parent=gene-AB25_RS22995;Dbxref=GenBank:WP_001118055.1;Name=WP_001118055.1;gbkey=CDS;gene=yafV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308273.1;locus_tag=AB25_RS22995;product=2-oxoglutaramate amidase;protein_id=WP_001118055.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 2193 2639 . + . ID=gene-AB25_RS22990;Name=ivy;gbkey=Gene;gene=ivy;gene_biotype=protein_coding;locus_tag=AB25_RS22990;old_locus_tag=AB25_0301 NZ_JJMC01000006.1 Protein Homology CDS 2193 2639 . + 0 ID=cds-WP_001308392.1;Parent=gene-AB25_RS22990;Dbxref=GenBank:WP_001308392.1;Name=WP_001308392.1;gbkey=CDS;gene=ivy;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308274.2;locus_tag=AB25_RS22990;product=Ivy family C-type lysozyme inhibitor;protein_id=WP_001308392.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 2682 5126 . - . ID=gene-AB25_RS22985;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=AB25_RS22985;old_locus_tag=AB25_0302 NZ_JJMC01000006.1 Protein Homology CDS 2682 5126 . - 0 ID=cds-WP_000973093.1;Parent=gene-AB25_RS22985;Dbxref=GenBank:WP_000973093.1;Name=WP_000973093.1;Ontology_term=GO:0033539,GO:0003995,GO:0050660;gbkey=CDS;gene=fadE;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid beta-oxidation using acyl-CoA dehydrogenase|0033539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414756.2;locus_tag=AB25_RS22985;product=acyl-CoA dehydrogenase FadE;protein_id=WP_000973093.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 5366 5944 . + . ID=gene-AB25_RS22980;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;locus_tag=AB25_RS22980;old_locus_tag=AB25_0303 NZ_JJMC01000006.1 Protein Homology CDS 5366 5944 . + 0 ID=cds-WP_000284050.1;Parent=gene-AB25_RS22980;Dbxref=GenBank:WP_000284050.1;Name=WP_000284050.1;Ontology_term=GO:1901135,GO:0008968;gbkey=CDS;gene=lpcA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308276.1;locus_tag=AB25_RS22980;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_000284050.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 6150 6917 . + . ID=gene-AB25_RS22975;Name=yafJ;gbkey=Gene;gene=yafJ;gene_biotype=protein_coding;locus_tag=AB25_RS22975;old_locus_tag=AB25_0304 NZ_JJMC01000006.1 Protein Homology CDS 6150 6917 . + 0 ID=cds-WP_000333380.1;Parent=gene-AB25_RS22975;Dbxref=GenBank:WP_000333380.1;Name=WP_000333380.1;Ontology_term=GO:0006541,GO:0016740;gbkey=CDS;gene=yafJ;go_function=transferase activity|0016740||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414758.1;locus_tag=AB25_RS22975;product=class II glutamine amidotransferase;protein_id=WP_000333380.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 6888 7628 . - . ID=gene-AB25_RS22970;Name=dpaA;gbkey=Gene;gene=dpaA;gene_biotype=protein_coding;locus_tag=AB25_RS22970;old_locus_tag=AB25_0305 NZ_JJMC01000006.1 Protein Homology CDS 6888 7628 . - 0 ID=cds-WP_001225679.1;Parent=gene-AB25_RS22970;Dbxref=GenBank:WP_001225679.1;Name=WP_001225679.1;gbkey=CDS;gene=dpaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308278.1;locus_tag=AB25_RS22970;product=peptidoglycan meso-diaminopimelic acid protein amidase;protein_id=WP_001225679.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 7920 8678 . + . ID=gene-AB25_RS22965;Name=yafL;gbkey=Gene;gene=yafL;gene_biotype=protein_coding;locus_tag=AB25_RS22965;old_locus_tag=AB25_0306 NZ_JJMC01000006.1 Protein Homology CDS 7920 8678 . + 0 ID=cds-WP_000009291.1;Parent=gene-AB25_RS22965;Dbxref=GenBank:WP_000009291.1;Name=WP_000009291.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;gene=yafL;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012599877.1;locus_tag=AB25_RS22965;product=C40 family peptidase;protein_id=WP_000009291.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 8854 9351 . + . ID=gene-AB25_RS22960;Name=rayT;gbkey=Gene;gene=rayT;gene_biotype=protein_coding;locus_tag=AB25_RS22960;old_locus_tag=AB25_0307 NZ_JJMC01000006.1 Protein Homology CDS 8854 9351 . + 0 ID=cds-WP_000006256.1;Parent=gene-AB25_RS22960;Dbxref=GenBank:WP_000006256.1;Name=WP_000006256.1;gbkey=CDS;gene=rayT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706228.1;locus_tag=AB25_RS22960;product=REP-associated tyrosine transposase RayT;protein_id=WP_000006256.1;transl_table=11 NZ_JJMC01000006.1 RefSeq pseudogene 9669 11387 . - . ID=gene-AB25_RS22955;Name=AB25_RS22955;end_range=11387,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS22955;old_locus_tag=AB25_0310;partial=true;pseudo=true NZ_JJMC01000006.1 Protein Homology CDS 9669 11387 . - 0 ID=cds-AB25_RS22955;Parent=gene-AB25_RS22955;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009306,GO:0044780,GO:0071978;end_range=11387,.;gbkey=CDS;go_process=protein secretion|0009306||IEA,bacterial-type flagellum assembly|0044780||IEA,bacterial-type flagellum-dependent swarming motility|0071978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001140833.1;locus_tag=AB25_RS22955;partial=true;product=flagellar biosynthesis protein FlhA;pseudo=true;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 11353 12138 . + . ID=gene-AB25_RS22950;Name=lafU;gbkey=Gene;gene=lafU;gene_biotype=protein_coding;locus_tag=AB25_RS22950;old_locus_tag=AB25_0311 NZ_JJMC01000006.1 Protein Homology CDS 11353 12138 . + 0 ID=cds-WP_000207589.1;Parent=gene-AB25_RS22950;Dbxref=GenBank:WP_000207589.1;Name=WP_000207589.1;gbkey=CDS;gene=lafU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706230.2;locus_tag=AB25_RS22950;product=putative lateral flagellar export/assembly protein LafU;protein_id=WP_000207589.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 12209 13264 . + . ID=gene-AB25_RS22945;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=AB25_RS22945;old_locus_tag=AB25_0312 NZ_JJMC01000006.1 Protein Homology CDS 12209 13264 . + 0 ID=cds-WP_001226155.1;Parent=gene-AB25_RS22945;Dbxref=GenBank:WP_001226155.1;Name=WP_001226155.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414766.1;locus_tag=AB25_RS22945;product=DNA polymerase IV;protein_id=WP_001226155.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 13261 13713 . + . ID=gene-AB25_RS22940;Name=yafP;gbkey=Gene;gene=yafP;gene_biotype=protein_coding;locus_tag=AB25_RS22940;old_locus_tag=AB25_0313 NZ_JJMC01000006.1 Protein Homology CDS 13261 13713 . + 0 ID=cds-WP_001059874.1;Parent=gene-AB25_RS22940;Dbxref=GenBank:WP_001059874.1;Name=WP_001059874.1;gbkey=CDS;gene=yafP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414769.1;locus_tag=AB25_RS22940;product=GNAT family N-acetyltransferase;protein_id=WP_001059874.1;transl_table=11 NZ_JJMC01000006.1 RefSeq pseudogene 14032 14238 . + . ID=gene-AB25_RS22935;Name=AB25_RS22935;end_range=14238,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS22935;old_locus_tag=AB25_0314;partial=true;pseudo=true NZ_JJMC01000006.1 Protein Homology CDS 14032 14238 . + 0 ID=cds-AB25_RS22935;Parent=gene-AB25_RS22935;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=14238,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706235.2;locus_tag=AB25_RS22935;partial=true;product=RtcB family protein;pseudo=true;transl_table=11 NZ_JJMC01000006.1 RefSeq pseudogene 14177 14586 . + . ID=gene-AB25_RS0124465;Name=AB25_RS0124465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS0124465;pseudo=true NZ_JJMC01000006.1 Protein Homology CDS 14177 14586 . + 0 ID=cds-AB25_RS0124465;Parent=gene-AB25_RS0124465;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000602105.1;locus_tag=AB25_RS0124465;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 14643 16100 . - . ID=gene-AB25_RS22930;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=AB25_RS22930;old_locus_tag=AB25_0317 NZ_JJMC01000006.1 Protein Homology CDS 14643 16100 . - 0 ID=cds-WP_001293003.1;Parent=gene-AB25_RS22930;Dbxref=GenBank:WP_001293003.1;Name=WP_001293003.1;Ontology_term=GO:0006508,GO:0016787;gbkey=CDS;gene=pepD;go_function=hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308291.1;locus_tag=AB25_RS22930;product=cytosol nonspecific dipeptidase;protein_id=WP_001293003.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 16361 16819 . + . ID=gene-AB25_RS22925;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=AB25_RS22925;old_locus_tag=AB25_0318 NZ_JJMC01000006.1 Protein Homology CDS 16361 16819 . + 0 ID=cds-WP_001291992.1;Parent=gene-AB25_RS22925;Dbxref=GenBank:WP_001291992.1;Name=WP_001291992.1;Ontology_term=GO:0009116,GO:0000310;gbkey=CDS;gene=gpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308292.1;locus_tag=AB25_RS22925;product=xanthine phosphoribosyltransferase;protein_id=WP_001291992.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 16911 18155 . + . ID=gene-AB25_RS22920;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=AB25_RS22920;old_locus_tag=AB25_0319 NZ_JJMC01000006.1 Protein Homology CDS 16911 18155 . + 0 ID=cds-WP_000189539.1;Parent=gene-AB25_RS22920;Dbxref=GenBank:WP_000189539.1;Name=WP_000189539.1;Ontology_term=GO:0016788;gbkey=CDS;gene=frsA;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706239.1;locus_tag=AB25_RS22920;product=esterase FrsA;protein_id=WP_000189539.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 18213 18614 . + . ID=gene-AB25_RS22915;Name=crl;gbkey=Gene;gene=crl;gene_biotype=protein_coding;locus_tag=AB25_RS22915;old_locus_tag=AB25_0320 NZ_JJMC01000006.1 Protein Homology CDS 18213 18614 . + 0 ID=cds-WP_000174677.1;Parent=gene-AB25_RS22915;Dbxref=GenBank:WP_000174677.1;Name=WP_000174677.1;Ontology_term=GO:0045893;gbkey=CDS;gene=crl;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308294.1;locus_tag=AB25_RS22915;product=sigma factor-binding protein Crl;protein_id=WP_000174677.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 18653 19708 . - . ID=gene-AB25_RS22910;Name=phoE;gbkey=Gene;gene=phoE;gene_biotype=protein_coding;locus_tag=AB25_RS22910;old_locus_tag=AB25_0321 NZ_JJMC01000006.1 Protein Homology CDS 18653 19708 . - 0 ID=cds-WP_000749881.1;Parent=gene-AB25_RS22910;Dbxref=GenBank:WP_000749881.1;Name=WP_000749881.1;Ontology_term=GO:0034220,GO:0015288,GO:0016020;gbkey=CDS;gene=phoE;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308295.1;locus_tag=AB25_RS22910;product=phosphoporin PhoE;protein_id=WP_000749881.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 19996 21099 . + . ID=gene-AB25_RS22905;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=AB25_RS22905;old_locus_tag=AB25_0322 NZ_JJMC01000006.1 Protein Homology CDS 19996 21099 . + 0 ID=cds-WP_001285288.1;Parent=gene-AB25_RS22905;Dbxref=GenBank:WP_001285288.1;Name=WP_001285288.1;Ontology_term=GO:0006561,GO:0004349,GO:0005737;gbkey=CDS;gene=proB;go_component=cytoplasm|0005737||IEA;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308296.1;locus_tag=AB25_RS22905;product=glutamate 5-kinase;protein_id=WP_001285288.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 21111 22364 . + . ID=gene-AB25_RS22900;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=AB25_RS22900;old_locus_tag=AB25_0323 NZ_JJMC01000006.1 Protein Homology CDS 21111 22364 . + 0 ID=cds-WP_000893260.1;Parent=gene-AB25_RS22900;Dbxref=GenBank:WP_000893260.1;Name=WP_000893260.1;Ontology_term=GO:0006561,GO:0004350;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414778.1;locus_tag=AB25_RS22900;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_000893260.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 22479 22554 . + . ID=gene-AB25_RS22895;Name=AB25_RS22895;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS22895;old_locus_tag=AB25_0324 NZ_JJMC01000006.1 tRNAscan-SE tRNA 22479 22554 . + . ID=rna-AB25_RS22895;Parent=gene-AB25_RS22895;anticodon=(pos:22512..22514);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS22895;product=tRNA-Thr NZ_JJMC01000006.1 tRNAscan-SE exon 22479 22554 . + . ID=exon-AB25_RS22895-1;Parent=rna-AB25_RS22895;anticodon=(pos:22512..22514);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS22895;product=tRNA-Thr NZ_JJMC01000006.1 RefSeq gene 23161 23319 . + . ID=gene-AB25_RS31940;Name=AB25_RS31940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31940;old_locus_tag=AB25_0325 NZ_JJMC01000006.1 Protein Homology CDS 23161 23319 . + 0 ID=cds-WP_000788777.1;Parent=gene-AB25_RS31940;Dbxref=GenBank:WP_000788777.1;Name=WP_000788777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001570982.1;locus_tag=AB25_RS31940;product=hypothetical protein;protein_id=WP_000788777.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 25569 25745 . + . ID=gene-AB25_RS31945;Name=AB25_RS31945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31945;old_locus_tag=AB25_0326 NZ_JJMC01000006.1 Protein Homology CDS 25569 25745 . + 0 ID=cds-WP_000873434.1;Parent=gene-AB25_RS31945;Dbxref=GenBank:WP_000873434.1;Name=WP_000873434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000873435.1;locus_tag=AB25_RS31945;product=hypothetical protein;protein_id=WP_000873434.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 25767 25937 . + . ID=gene-AB25_RS31950;Name=AB25_RS31950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31950;old_locus_tag=AB25_0327 NZ_JJMC01000006.1 Protein Homology CDS 25767 25937 . + 0 ID=cds-WP_000005468.1;Parent=gene-AB25_RS31950;Dbxref=GenBank:WP_000005468.1;Name=WP_000005468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000005469.1;locus_tag=AB25_RS31950;product=hypothetical protein;protein_id=WP_000005468.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 25991 26560 . + . ID=gene-AB25_RS22885;Name=AB25_RS22885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS22885;old_locus_tag=AB25_0328 NZ_JJMC01000006.1 Protein Homology CDS 25991 26560 . + 0 ID=cds-WP_032170577.1;Parent=gene-AB25_RS22885;Dbxref=GenBank:WP_032170577.1;Name=WP_032170577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005766820.1;locus_tag=AB25_RS22885;product=transcriptional regulator;protein_id=WP_032170577.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 26570 26839 . + . ID=gene-AB25_RS22880;Name=AB25_RS22880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS22880;old_locus_tag=AB25_0329 NZ_JJMC01000006.1 Protein Homology CDS 26570 26839 . + 0 ID=cds-WP_000221927.1;Parent=gene-AB25_RS22880;Dbxref=GenBank:WP_000221927.1;Name=WP_000221927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001581993.1;locus_tag=AB25_RS22880;product=hypothetical protein;protein_id=WP_000221927.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 26936 27319 . + . ID=gene-AB25_RS0124475;Name=AB25_RS0124475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0124475 NZ_JJMC01000006.1 Protein Homology CDS 26936 27319 . + 0 ID=cds-WP_000516769.1;Parent=gene-AB25_RS0124475;Dbxref=GenBank:WP_000516769.1;Name=WP_000516769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000532779.1;locus_tag=AB25_RS0124475;product=hypothetical protein;protein_id=WP_000516769.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 27378 27608 . + . ID=gene-AB25_RS22875;Name=AB25_RS22875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS22875;old_locus_tag=AB25_0331 NZ_JJMC01000006.1 Protein Homology CDS 27378 27608 . + 0 ID=cds-WP_000611636.1;Parent=gene-AB25_RS22875;Dbxref=GenBank:WP_000611636.1;Name=WP_000611636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000611636.1;locus_tag=AB25_RS22875;product=hypothetical protein;protein_id=WP_000611636.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 27605 27913 . + . ID=gene-AB25_RS0124480;Name=AB25_RS0124480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0124480 NZ_JJMC01000006.1 Protein Homology CDS 27605 27913 . + 0 ID=cds-WP_032170579.1;Parent=gene-AB25_RS0124480;Dbxref=GenBank:WP_032170579.1;Name=WP_032170579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000131517.1;locus_tag=AB25_RS0124480;product=hypothetical protein;protein_id=WP_032170579.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 28920 29129 . + . ID=gene-AB25_RS22870;Name=AB25_RS22870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS22870;old_locus_tag=AB25_0333 NZ_JJMC01000006.1 Protein Homology CDS 28920 29129 . + 0 ID=cds-WP_000806868.1;Parent=gene-AB25_RS22870;Dbxref=GenBank:WP_000806868.1;Name=WP_000806868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000806869.1;locus_tag=AB25_RS22870;product=hypothetical protein;protein_id=WP_000806868.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 29129 29503 . + . ID=gene-AB25_RS22865;Name=AB25_RS22865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS22865;old_locus_tag=AB25_0334 NZ_JJMC01000006.1 Protein Homology CDS 29129 29503 . + 0 ID=cds-WP_000996198.1;Parent=gene-AB25_RS22865;Dbxref=GenBank:WP_000996198.1;Name=WP_000996198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996198.1;locus_tag=AB25_RS22865;product=hypothetical protein;protein_id=WP_000996198.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 29520 30548 . + . ID=gene-AB25_RS22860;Name=AB25_RS22860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS22860;old_locus_tag=AB25_0335 NZ_JJMC01000006.1 Protein Homology CDS 29520 30548 . + 0 ID=cds-WP_001730429.1;Parent=gene-AB25_RS22860;Dbxref=GenBank:WP_001730429.1;Name=WP_001730429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001730429.1;locus_tag=AB25_RS22860;product=major capsid protein;protein_id=WP_001730429.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 30713 30910 . + . ID=gene-AB25_RS32790;Name=AB25_RS32790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32790;old_locus_tag=AB25_0336 NZ_JJMC01000006.1 Protein Homology CDS 30713 30910 . + 0 ID=cds-WP_001091092.1;Parent=gene-AB25_RS32790;Dbxref=GenBank:WP_001091092.1;Name=WP_001091092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001091092.1;locus_tag=AB25_RS32790;product=hypothetical protein;protein_id=WP_001091092.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 30945 32786 . + . ID=gene-AB25_RS22850;Name=AB25_RS22850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS22850;old_locus_tag=AB25_0337 NZ_JJMC01000006.1 Protein Homology CDS 30945 32786 . + 0 ID=cds-WP_032170580.1;Parent=gene-AB25_RS22850;Dbxref=GenBank:WP_032170580.1;Name=WP_032170580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000891724.1;locus_tag=AB25_RS22850;product=hypothetical protein;protein_id=WP_032170580.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 32834 33511 . + . ID=gene-AB25_RS22845;Name=AB25_RS22845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS22845;old_locus_tag=AB25_0338 NZ_JJMC01000006.1 Protein Homology CDS 32834 33511 . + 0 ID=cds-WP_032170581.1;Parent=gene-AB25_RS22845;Dbxref=GenBank:WP_032170581.1;Name=WP_032170581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001240680.1;locus_tag=AB25_RS22845;product=phage baseplate protein;protein_id=WP_032170581.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 33593 34870 . - . ID=gene-AB25_RS22840;Name=AB25_RS22840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS22840;old_locus_tag=AB25_0339 NZ_JJMC01000006.1 Protein Homology CDS 33593 34870 . - 0 ID=cds-WP_172904515.1;Parent=gene-AB25_RS22840;Dbxref=GenBank:WP_172904515.1;Name=WP_172904515.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001730433.1;locus_tag=AB25_RS22840;product=tyrosine-type recombinase/integrase;protein_id=WP_172904515.1;transl_table=11 NZ_JJMC01000006.1 RefSeq pseudogene 35158 35496 . - . ID=gene-AB25_RS22835;Name=AB25_RS22835;end_range=35496,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS22835;old_locus_tag=AB25_0341;partial=true;pseudo=true NZ_JJMC01000006.1 Protein Homology CDS 35158 35496 . - 0 ID=cds-AB25_RS22835;Parent=gene-AB25_RS22835;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=35496,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308332.2;locus_tag=AB25_RS22835;partial=true;product=LysR substrate-binding domain-containing protein;pseudo=true;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 35547 36503 . - . ID=gene-AB25_RS22830;Name=paoD;gbkey=Gene;gene=paoD;gene_biotype=protein_coding;locus_tag=AB25_RS22830;old_locus_tag=AB25_0342 NZ_JJMC01000006.1 Protein Homology CDS 35547 36503 . - 0 ID=cds-WP_000121355.1;Parent=gene-AB25_RS22830;Dbxref=GenBank:WP_000121355.1;Name=WP_000121355.1;gbkey=CDS;gene=paoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414817.1;locus_tag=AB25_RS22830;product=molybdenum cofactor insertion chaperone PaoD;protein_id=WP_000121355.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 36513 38711 . - . ID=gene-AB25_RS22825;Name=paoC;gbkey=Gene;gene=paoC;gene_biotype=protein_coding;locus_tag=AB25_RS22825;old_locus_tag=AB25_0343 NZ_JJMC01000006.1 Protein Homology CDS 36513 38711 . - 0 ID=cds-WP_000667031.1;Parent=gene-AB25_RS22825;Dbxref=GenBank:WP_000667031.1;Name=WP_000667031.1;gbkey=CDS;gene=paoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414818.1;locus_tag=AB25_RS22825;product=aldehyde oxidoreductase molybdenum-binding subunit PaoC;protein_id=WP_000667031.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 38708 39664 . - . ID=gene-AB25_RS22820;Name=paoB;gbkey=Gene;gene=paoB;gene_biotype=protein_coding;locus_tag=AB25_RS22820;old_locus_tag=AB25_0344 NZ_JJMC01000006.1 Protein Homology CDS 38708 39664 . - 0 ID=cds-WP_000643336.1;Parent=gene-AB25_RS22820;Dbxref=GenBank:WP_000643336.1;Name=WP_000643336.1;gbkey=CDS;gene=paoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414819.1;locus_tag=AB25_RS22820;product=aldehyde oxidoreductase FAD-binding subunit PaoB;protein_id=WP_000643336.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 39661 40350 . - . ID=gene-AB25_RS22815;Name=paoA;gbkey=Gene;gene=paoA;gene_biotype=protein_coding;locus_tag=AB25_RS22815;old_locus_tag=AB25_0345 NZ_JJMC01000006.1 Protein Homology CDS 39661 40350 . - 0 ID=cds-WP_000070694.1;Parent=gene-AB25_RS22815;Dbxref=GenBank:WP_000070694.1;Name=WP_000070694.1;Ontology_term=GO:0046872,GO:0047770,GO:0051536;gbkey=CDS;gene=paoA;go_function=metal ion binding|0046872||IEA,carboxylate reductase activity|0047770||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414820.1;locus_tag=AB25_RS22815;product=aldehyde dehydrogenase iron-sulfur subunit PaoA;protein_id=WP_000070694.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 40768 41382 . + . ID=gene-AB25_RS22810;Name=yagU;gbkey=Gene;gene=yagU;gene_biotype=protein_coding;locus_tag=AB25_RS22810;old_locus_tag=AB25_0347 NZ_JJMC01000006.1 Protein Homology CDS 40768 41382 . + 0 ID=cds-WP_001019920.1;Parent=gene-AB25_RS22810;Dbxref=GenBank:WP_001019920.1;Name=WP_001019920.1;gbkey=CDS;gene=yagU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308344.1;locus_tag=AB25_RS22810;product=YagU family protein;protein_id=WP_001019920.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 41630 41959 . - . ID=gene-AB25_RS0124485;Name=ykgJ;gbkey=Gene;gene=ykgJ;gene_biotype=protein_coding;locus_tag=AB25_RS0124485 NZ_JJMC01000006.1 Protein Homology CDS 41630 41959 . - 0 ID=cds-WP_001303809.1;Parent=gene-AB25_RS0124485;Dbxref=GenBank:WP_001303809.1;Name=WP_001303809.1;Ontology_term=GO:0046872,GO:0051536;gbkey=CDS;gene=ykgJ;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414822.1;locus_tag=AB25_RS0124485;product=YkgJ family cysteine cluster protein;protein_id=WP_001303809.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 42272 42982 . - . ID=gene-AB25_RS22805;Name=ecpE;gbkey=Gene;gene=ecpE;gene_biotype=protein_coding;locus_tag=AB25_RS22805;old_locus_tag=AB25_0349 NZ_JJMC01000006.1 Protein Homology CDS 42272 42982 . - 0 ID=cds-WP_001305432.1;Parent=gene-AB25_RS22805;Dbxref=GenBank:WP_001305432.1;Name=WP_001305432.1;gbkey=CDS;gene=ecpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414823.2;locus_tag=AB25_RS22805;product=fimbrial chaperone EcpE;protein_id=WP_001305432.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 42951 44594 . - . ID=gene-AB25_RS22800;Name=ecpD;gbkey=Gene;gene=ecpD;gene_biotype=protein_coding;locus_tag=AB25_RS22800;old_locus_tag=AB25_0350 NZ_JJMC01000006.1 Protein Homology CDS 42951 44594 . - 0 ID=cds-WP_001323478.1;Parent=gene-AB25_RS22800;Dbxref=GenBank:WP_001323478.1;Name=WP_001323478.1;gbkey=CDS;gene=ecpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414824.1;locus_tag=AB25_RS22800;product=fimbrial adhesin EcpD;protein_id=WP_001323478.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 44584 47109 . - . ID=gene-AB25_RS22795;Name=ecpC;gbkey=Gene;gene=ecpC;gene_biotype=protein_coding;gene_synonym=yagX;locus_tag=AB25_RS22795;old_locus_tag=AB25_0351 NZ_JJMC01000006.1 Protein Homology CDS 44584 47109 . - 0 ID=cds-WP_001131091.1;Parent=gene-AB25_RS22795;Dbxref=GenBank:WP_001131091.1;Name=WP_001131091.1;gbkey=CDS;gene=ecpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414825.1;locus_tag=AB25_RS22795;product=fimbrial usher EcpC;protein_id=WP_001131091.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 47135 47803 . - . ID=gene-AB25_RS22790;Name=ecpB;gbkey=Gene;gene=ecpB;gene_biotype=protein_coding;gene_synonym=yagY;locus_tag=AB25_RS22790;old_locus_tag=AB25_0352 NZ_JJMC01000006.1 Protein Homology CDS 47135 47803 . - 0 ID=cds-WP_000716398.1;Parent=gene-AB25_RS22790;Dbxref=GenBank:WP_000716398.1;Name=WP_000716398.1;gbkey=CDS;gene=ecpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414826.1;locus_tag=AB25_RS22790;product=fimbrial chaperone EcpB;protein_id=WP_000716398.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 47861 48448 . - . ID=gene-AB25_RS22785;Name=ecpA;gbkey=Gene;gene=ecpA;gene_biotype=protein_coding;gene_synonym=matB;locus_tag=AB25_RS22785;old_locus_tag=AB25_0353 NZ_JJMC01000006.1 Protein Homology CDS 47861 48448 . - 0 ID=cds-WP_000730974.1;Parent=gene-AB25_RS22785;Dbxref=GenBank:WP_000730974.1;Name=WP_000730974.1;gbkey=CDS;gene=ecpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308350.1;locus_tag=AB25_RS22785;product=common pilus major fimbrillin subunit EcpA;protein_id=WP_000730974.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 48523 49065 . - . ID=gene-AB25_RS22780;Name=ecpR;gbkey=Gene;gene=ecpR;gene_biotype=protein_coding;gene_synonym=matA;locus_tag=AB25_RS22780;old_locus_tag=AB25_0354 NZ_JJMC01000006.1 Protein Homology CDS 48523 49065 . - 0 ID=cds-WP_001323479.1;Parent=gene-AB25_RS22780;Dbxref=GenBank:WP_001323479.1;Name=WP_001323479.1;Ontology_term=GO:0006355,GO:1902021,GO:0003677;gbkey=CDS;gene=ecpR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of bacterial-type flagellum-dependent cell motility|1902021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308351.2;locus_tag=AB25_RS22780;product=ECP biosynthesis operon DNA-binding transcriptional regulator EcpR;protein_id=WP_001323479.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 49888 50115 . + . ID=gene-AB25_RS0124490;Name=ykgL;gbkey=Gene;gene=ykgL;gene_biotype=protein_coding;locus_tag=AB25_RS0124490 NZ_JJMC01000006.1 Protein Homology CDS 49888 50115 . + 0 ID=cds-WP_001147279.1;Parent=gene-AB25_RS0124490;Dbxref=GenBank:WP_001147279.1;Name=WP_001147279.1;gbkey=CDS;gene=ykgL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414829.1;locus_tag=AB25_RS0124490;product=protein YkgL;protein_id=WP_001147279.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 50150 50290 . - . ID=gene-AB25_RS22775;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;locus_tag=AB25_RS22775;old_locus_tag=AB25_0355 NZ_JJMC01000006.1 Protein Homology CDS 50150 50290 . - 0 ID=cds-WP_000866436.1;Parent=gene-AB25_RS22775;Dbxref=GenBank:WP_000866436.1;Name=WP_000866436.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588437.1;locus_tag=AB25_RS22775;product=type B 50S ribosomal protein L36;protein_id=WP_000866436.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 50290 50553 . - . ID=gene-AB25_RS22770;Name=ykgM;gbkey=Gene;gene=ykgM;gene_biotype=protein_coding;locus_tag=AB25_RS22770;old_locus_tag=AB25_0356 NZ_JJMC01000006.1 Protein Homology CDS 50290 50553 . - 0 ID=cds-WP_000803998.1;Parent=gene-AB25_RS22770;Dbxref=GenBank:WP_000803998.1;Name=WP_000803998.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414830.1;locus_tag=AB25_RS22770;product=type B 50S ribosomal protein L31;protein_id=WP_000803998.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 50917 51018 . - . ID=gene-AB25_RS32795;Name=ykgR;gbkey=Gene;gene=ykgR;gene_biotype=protein_coding;locus_tag=AB25_RS32795 NZ_JJMC01000006.1 Protein Homology CDS 50917 51018 . - 0 ID=cds-WP_000662258.1;Parent=gene-AB25_RS32795;Dbxref=GenBank:WP_000662258.1;Name=WP_000662258.1;gbkey=CDS;gene=ykgR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791238.1;locus_tag=AB25_RS32795;product=small membrane protein YkgR;protein_id=WP_000662258.1;transl_table=11 NZ_JJMC01000006.1 RefSeq pseudogene 51492 51581 . - . ID=gene-AB25_RS32360;Name=AB25_RS32360;end_range=51581,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32360;partial=true;pseudo=true NZ_JJMC01000006.1 Protein Homology CDS 51492 51581 . - 0 ID=cds-AB25_RS32360;Parent=gene-AB25_RS32360;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=51581,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308358.1;locus_tag=AB25_RS32360;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 52133 56389 . + . ID=gene-AB25_RS22765;Name=fdeC;gbkey=Gene;gene=fdeC;gene_biotype=protein_coding;locus_tag=AB25_RS22765;old_locus_tag=AB25_0358 NZ_JJMC01000006.1 Protein Homology CDS 52133 56389 . + 0 ID=cds-WP_000020229.1;Parent=gene-AB25_RS22765;Dbxref=GenBank:WP_000020229.1;Name=WP_000020229.1;gbkey=CDS;gene=fdeC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001635811.1;locus_tag=AB25_RS22765;product=inverse autotransporter adhesin FdeC;protein_id=WP_000020229.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 56529 57380 . - . ID=gene-AB25_RS0124500;Name=AB25_RS0124500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0124500;old_locus_tag=AB25_0360 NZ_JJMC01000006.1 Protein Homology CDS 56529 57380 . - 0 ID=cds-WP_000621009.1;Parent=gene-AB25_RS0124500;Dbxref=GenBank:WP_000621009.1;Name=WP_000621009.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308364.2;locus_tag=AB25_RS0124500;product=helix-turn-helix domain-containing protein;protein_id=WP_000621009.1;transl_table=11 NZ_JJMC01000006.1 RefSeq pseudogene 57683 57811 . + . ID=gene-AB25_RS31590;Name=AB25_RS31590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS31590;partial=true;pseudo=true;start_range=.,57683 NZ_JJMC01000006.1 Protein Homology CDS 57683 57811 . + 0 ID=cds-AB25_RS31590;Parent=gene-AB25_RS31590;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308365.3;locus_tag=AB25_RS31590;partial=true;product=aldo/keto reductase;pseudo=true;start_range=.,57683;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 57971 58564 . - . ID=gene-AB25_RS22760;Name=rclC;gbkey=Gene;gene=rclC;gene_biotype=protein_coding;locus_tag=AB25_RS22760;old_locus_tag=AB25_0361 NZ_JJMC01000006.1 Protein Homology CDS 57971 58564 . - 0 ID=cds-WP_001306921.1;Parent=gene-AB25_RS22760;Dbxref=GenBank:WP_001306921.1;Name=WP_001306921.1;gbkey=CDS;gene=rclC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414835.2;locus_tag=AB25_RS22760;product=reactive chlorine species resistance protein RclC;protein_id=WP_001306921.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 58576 58812 . - . ID=gene-AB25_RS22755;Name=rclB;gbkey=Gene;gene=rclB;gene_biotype=protein_coding;locus_tag=AB25_RS22755;old_locus_tag=AB25_0362 NZ_JJMC01000006.1 Protein Homology CDS 58576 58812 . - 0 ID=cds-WP_000474091.1;Parent=gene-AB25_RS22755;Dbxref=GenBank:WP_000474091.1;Name=WP_000474091.1;gbkey=CDS;gene=rclB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414837.2;locus_tag=AB25_RS22755;product=reactive chlorine resistance periplasmic protein RclB;protein_id=WP_000474091.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 58921 60246 . - . ID=gene-AB25_RS22750;Name=rclA;gbkey=Gene;gene=rclA;gene_biotype=protein_coding;locus_tag=AB25_RS22750;old_locus_tag=AB25_0363 NZ_JJMC01000006.1 Protein Homology CDS 58921 60246 . - 0 ID=cds-WP_001046317.1;Parent=gene-AB25_RS22750;Dbxref=GenBank:WP_001046317.1;Name=WP_001046317.1;gbkey=CDS;gene=rclA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308369.2;locus_tag=AB25_RS22750;product=reactive chlorine resistance oxidoreductase RclA;protein_id=WP_001046317.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 60472 61326 . + . ID=gene-AB25_RS22745;Name=rclR;gbkey=Gene;gene=rclR;gene_biotype=protein_coding;locus_tag=AB25_RS22745;old_locus_tag=AB25_0364 NZ_JJMC01000006.1 Protein Homology CDS 60472 61326 . + 0 ID=cds-WP_000339586.1;Parent=gene-AB25_RS22745;Dbxref=GenBank:WP_000339586.1;Name=WP_000339586.1;gbkey=CDS;gene=rclR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308370.1;locus_tag=AB25_RS22745;product=reactive chlorine-specific transcriptional regulator RclR;protein_id=WP_000339586.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 61854 62573 . + . ID=gene-AB25_RS22740;Name=ykgE;gbkey=Gene;gene=ykgE;gene_biotype=protein_coding;locus_tag=AB25_RS22740;old_locus_tag=AB25_0365 NZ_JJMC01000006.1 Protein Homology CDS 61854 62573 . + 0 ID=cds-WP_001102099.1;Parent=gene-AB25_RS22740;Dbxref=GenBank:WP_001102099.1;Name=WP_001102099.1;Ontology_term=GO:0016491,GO:0046872,GO:0051536;gbkey=CDS;gene=ykgE;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414840.1;locus_tag=AB25_RS22740;product=(Fe-S)-binding protein;protein_id=WP_001102099.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 62584 64011 . + . ID=gene-AB25_RS22735;Name=ykgF;gbkey=Gene;gene=ykgF;gene_biotype=protein_coding;locus_tag=AB25_RS22735;old_locus_tag=AB25_0366 NZ_JJMC01000006.1 Protein Homology CDS 62584 64011 . + 0 ID=cds-WP_000023927.1;Parent=gene-AB25_RS22735;Dbxref=GenBank:WP_000023927.1;Name=WP_000023927.1;Ontology_term=GO:0006089,GO:0051536;gbkey=CDS;gene=ykgF;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414841.1;locus_tag=AB25_RS22735;product=LutB/LldF family L-lactate oxidation iron-sulfur protein;protein_id=WP_000023927.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 64004 64699 . + . ID=gene-AB25_RS22730;Name=ykgG;gbkey=Gene;gene=ykgG;gene_biotype=protein_coding;locus_tag=AB25_RS22730;old_locus_tag=AB25_0367 NZ_JJMC01000006.1 Protein Homology CDS 64004 64699 . + 0 ID=cds-WP_001323770.1;Parent=gene-AB25_RS22730;Dbxref=GenBank:WP_001323770.1;Name=WP_001323770.1;Ontology_term=GO:0006089;gbkey=CDS;gene=ykgG;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414842.4;locus_tag=AB25_RS22730;product=LutC/YkgG family protein;protein_id=WP_001323770.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 64942 65610 . - . ID=gene-AB25_RS22725;Name=ykgH;gbkey=Gene;gene=ykgH;gene_biotype=protein_coding;locus_tag=AB25_RS22725;old_locus_tag=AB25_0368 NZ_JJMC01000006.1 Protein Homology CDS 64942 65610 . - 0 ID=cds-WP_001209100.1;Parent=gene-AB25_RS22725;Dbxref=GenBank:WP_001209100.1;Name=WP_001209100.1;gbkey=CDS;gene=ykgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414844.1;locus_tag=AB25_RS22725;product=protein YkgH;protein_id=WP_001209100.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 65823 67493 . - . ID=gene-AB25_RS22720;Name=betA;gbkey=Gene;gene=betA;gene_biotype=protein_coding;locus_tag=AB25_RS22720;old_locus_tag=AB25_0369 NZ_JJMC01000006.1 Protein Homology CDS 65823 67493 . - 0 ID=cds-WP_001159094.1;Parent=gene-AB25_RS22720;Dbxref=GenBank:WP_001159094.1;Name=WP_001159094.1;Ontology_term=GO:0019285,GO:0008812;gbkey=CDS;gene=betA;go_function=choline dehydrogenase activity|0008812||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414845.1;locus_tag=AB25_RS22720;product=choline dehydrogenase;protein_id=WP_001159094.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 67507 68979 . - . ID=gene-AB25_RS22715;Name=betB;gbkey=Gene;gene=betB;gene_biotype=protein_coding;locus_tag=AB25_RS22715;old_locus_tag=AB25_0370 NZ_JJMC01000006.1 Protein Homology CDS 67507 68979 . - 0 ID=cds-WP_000089055.1;Parent=gene-AB25_RS22715;Dbxref=GenBank:WP_000089055.1;Name=WP_000089055.1;Ontology_term=GO:0019285,GO:0008802,GO:0046872;gbkey=CDS;gene=betB;go_function=betaine-aldehyde dehydrogenase (NAD+) activity|0008802||IEA,metal ion binding|0046872||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414846.1;locus_tag=AB25_RS22715;product=betaine-aldehyde dehydrogenase;protein_id=WP_000089055.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 68993 69580 . - . ID=gene-AB25_RS22710;Name=betI;gbkey=Gene;gene=betI;gene_biotype=protein_coding;locus_tag=AB25_RS22710;old_locus_tag=AB25_0371 NZ_JJMC01000006.1 Protein Homology CDS 68993 69580 . - 0 ID=cds-WP_001299022.1;Parent=gene-AB25_RS22710;Dbxref=GenBank:WP_001299022.1;Name=WP_001299022.1;Ontology_term=GO:0003677;gbkey=CDS;gene=betI;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308386.3;locus_tag=AB25_RS22710;product=transcriptional regulator BetI;protein_id=WP_001299022.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 69709 71742 . + . ID=gene-AB25_RS22705;Name=betT;gbkey=Gene;gene=betT;gene_biotype=protein_coding;locus_tag=AB25_RS22705;old_locus_tag=AB25_0372 NZ_JJMC01000006.1 Protein Homology CDS 69709 71742 . + 0 ID=cds-WP_000131044.1;Parent=gene-AB25_RS22705;Dbxref=GenBank:WP_000131044.1;Name=WP_000131044.1;gbkey=CDS;gene=betT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308387.1;locus_tag=AB25_RS22705;product=choline BCCT transporter BetT;protein_id=WP_000131044.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 72048 72122 . + . ID=gene-AB25_RS31595;Name=AB25_RS31595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31595 NZ_JJMC01000006.1 Protein Homology CDS 72048 72122 . + 0 ID=cds-WP_120795374.1;Parent=gene-AB25_RS31595;Dbxref=GenBank:WP_120795374.1;Name=WP_120795374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518747.1;locus_tag=AB25_RS31595;product=protein YahV;protein_id=WP_120795374.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 72617 73705 . + . ID=gene-AB25_RS22700;Name=pdeL;gbkey=Gene;gene=pdeL;gene_biotype=protein_coding;locus_tag=AB25_RS22700;old_locus_tag=AB25_0373 NZ_JJMC01000006.1 Protein Homology CDS 72617 73705 . + 0 ID=cds-WP_001323766.1;Parent=gene-AB25_RS22700;Dbxref=GenBank:WP_001323766.1;Name=WP_001323766.1;gbkey=CDS;gene=pdeL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414849.1;locus_tag=AB25_RS22700;product=DNA-binding transcriptional activator/c-di-GMP phosphodiesterase PdeL;protein_id=WP_001323766.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 73747 74679 . - . ID=gene-AB25_RS22695;Name=yahB;gbkey=Gene;gene=yahB;gene_biotype=protein_coding;locus_tag=AB25_RS22695;old_locus_tag=AB25_0374 NZ_JJMC01000006.1 Protein Homology CDS 73747 74679 . - 0 ID=cds-WP_001084397.1;Parent=gene-AB25_RS22695;Dbxref=GenBank:WP_001084397.1;Name=WP_001084397.1;gbkey=CDS;gene=yahB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414850.1;locus_tag=AB25_RS22695;product=LysR substrate-binding domain-containing protein;protein_id=WP_001084397.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 74771 75268 . - . ID=gene-AB25_RS22690;Name=yahC;gbkey=Gene;gene=yahC;gene_biotype=protein_coding;locus_tag=AB25_RS22690;old_locus_tag=AB25_0375 NZ_JJMC01000006.1 Protein Homology CDS 74771 75268 . - 0 ID=cds-WP_001013877.1;Parent=gene-AB25_RS22690;Dbxref=GenBank:WP_001013877.1;Name=WP_001013877.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yahC;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414851.1;locus_tag=AB25_RS22690;product=DUF1097 domain-containing protein;protein_id=WP_001013877.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 75526 76131 . + . ID=gene-AB25_RS22685;Name=yahD;gbkey=Gene;gene=yahD;gene_biotype=protein_coding;locus_tag=AB25_RS22685;old_locus_tag=AB25_0376 NZ_JJMC01000006.1 Protein Homology CDS 75526 76131 . + 0 ID=cds-WP_000153100.1;Parent=gene-AB25_RS22685;Dbxref=GenBank:WP_000153100.1;Name=WP_000153100.1;Ontology_term=GO:0005515;gbkey=CDS;gene=yahD;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308394.1;locus_tag=AB25_RS22685;product=ankyrin repeat domain-containing protein;protein_id=WP_000153100.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 76171 77034 . + . ID=gene-AB25_RS22680;Name=yahE;gbkey=Gene;gene=yahE;gene_biotype=protein_coding;locus_tag=AB25_RS22680;old_locus_tag=AB25_0377 NZ_JJMC01000006.1 Protein Homology CDS 76171 77034 . + 0 ID=cds-WP_001323764.1;Parent=gene-AB25_RS22680;Dbxref=GenBank:WP_001323764.1;Name=WP_001323764.1;gbkey=CDS;gene=yahE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414853.1;locus_tag=AB25_RS22680;product=DUF2877 domain-containing protein;protein_id=WP_001323764.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 77024 78571 . + . ID=gene-AB25_RS22675;Name=fdrA;gbkey=Gene;gene=fdrA;gene_biotype=protein_coding;locus_tag=AB25_RS22675;old_locus_tag=AB25_0378 NZ_JJMC01000006.1 Protein Homology CDS 77024 78571 . + 0 ID=cds-WP_001391072.1;Parent=gene-AB25_RS22675;Dbxref=GenBank:WP_001391072.1;Name=WP_001391072.1;Ontology_term=GO:0003824;gbkey=CDS;gene=fdrA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414854.1;locus_tag=AB25_RS22675;product=acyl-CoA synthetase FdrA;protein_id=WP_001391072.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 78571 79989 . + . ID=gene-AB25_RS22670;Name=yahG;gbkey=Gene;gene=yahG;gene_biotype=protein_coding;locus_tag=AB25_RS22670;old_locus_tag=AB25_0379 NZ_JJMC01000006.1 Protein Homology CDS 78571 79989 . + 0 ID=cds-WP_000083455.1;Parent=gene-AB25_RS22670;Dbxref=GenBank:WP_000083455.1;Name=WP_000083455.1;gbkey=CDS;gene=yahG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414855.1;locus_tag=AB25_RS22670;product=DUF1116 domain-containing protein;protein_id=WP_000083455.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 80132 81082 . + . ID=gene-AB25_RS22665;Name=yahI;gbkey=Gene;gene=yahI;gene_biotype=protein_coding;locus_tag=AB25_RS22665;old_locus_tag=AB25_0380 NZ_JJMC01000006.1 Protein Homology CDS 80132 81082 . + 0 ID=cds-WP_000661649.1;Parent=gene-AB25_RS22665;Dbxref=GenBank:WP_000661649.1;Name=WP_000661649.1;gbkey=CDS;gene=yahI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414857.1;locus_tag=AB25_RS22665;product=carbamate kinase family protein;protein_id=WP_000661649.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 81092 82474 . + . ID=gene-AB25_RS22660;Name=yahJ;gbkey=Gene;gene=yahJ;gene_biotype=protein_coding;locus_tag=AB25_RS22660;old_locus_tag=AB25_0381 NZ_JJMC01000006.1 Protein Homology CDS 81092 82474 . + 0 ID=cds-WP_000665128.1;Parent=gene-AB25_RS22660;Dbxref=GenBank:WP_000665128.1;Name=WP_000665128.1;gbkey=CDS;gene=yahJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414858.1;locus_tag=AB25_RS22660;product=amidohydrolase family protein;protein_id=WP_000665128.1;transl_table=11 NZ_JJMC01000006.1 RefSeq pseudogene 82690 82764 . + . ID=gene-AB25_RS32365;Name=AB25_RS32365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32365;partial=true;pseudo=true;start_range=.,82690 NZ_JJMC01000006.1 Protein Homology CDS 82690 82764 . + 0 ID=cds-AB25_RS32365;Parent=gene-AB25_RS32365;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308405.1;locus_tag=AB25_RS32365;partial=true;product=hypothetical protein;pseudo=true;start_range=.,82690;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 82851 83900 . + . ID=gene-AB25_RS22655;Name=yahK;gbkey=Gene;gene=yahK;gene_biotype=protein_coding;locus_tag=AB25_RS22655;old_locus_tag=AB25_0383 NZ_JJMC01000006.1 Protein Homology CDS 82851 83900 . + 0 ID=cds-WP_000692742.1;Parent=gene-AB25_RS22655;Dbxref=GenBank:WP_000692742.1;Name=WP_000692742.1;gbkey=CDS;gene=yahK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308406.1;locus_tag=AB25_RS22655;product=NADPH-dependent aldehyde reductase YahK;protein_id=WP_000692742.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 84143 84958 . + . ID=gene-AB25_RS22650;Name=yahL;gbkey=Gene;gene=yahL;gene_biotype=protein_coding;locus_tag=AB25_RS22650;old_locus_tag=AB25_0384 NZ_JJMC01000006.1 Protein Homology CDS 84143 84958 . + 0 ID=cds-WP_001323762.1;Parent=gene-AB25_RS22650;Dbxref=GenBank:WP_001323762.1;Name=WP_001323762.1;gbkey=CDS;gene=yahL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308407.1;locus_tag=AB25_RS22650;product=protein YahL;protein_id=WP_001323762.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 85370 85615 . + . ID=gene-AB25_RS0124515;Name=yahM;gbkey=Gene;gene=yahM;gene_biotype=protein_coding;locus_tag=AB25_RS0124515 NZ_JJMC01000006.1 Protein Homology CDS 85370 85615 . + 0 ID=cds-WP_000290614.1;Parent=gene-AB25_RS0124515;Dbxref=GenBank:WP_000290614.1;Name=WP_000290614.1;gbkey=CDS;gene=yahM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414861.2;locus_tag=AB25_RS0124515;product=protein YahM;protein_id=WP_000290614.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 85632 86303 . - . ID=gene-AB25_RS22645;Name=yahN;gbkey=Gene;gene=yahN;gene_biotype=protein_coding;locus_tag=AB25_RS22645;old_locus_tag=AB25_0386 NZ_JJMC01000006.1 Protein Homology CDS 85632 86303 . - 0 ID=cds-WP_000976984.1;Parent=gene-AB25_RS22645;Dbxref=GenBank:WP_000976984.1;Name=WP_000976984.1;gbkey=CDS;gene=yahN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414862.1;locus_tag=AB25_RS22645;product=LysE family transporter;protein_id=WP_000976984.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 86450 86725 . + . ID=gene-AB25_RS22640;Name=yahO;gbkey=Gene;gene=yahO;gene_biotype=protein_coding;locus_tag=AB25_RS22640;old_locus_tag=AB25_0387 NZ_JJMC01000006.1 Protein Homology CDS 86450 86725 . + 0 ID=cds-WP_000691956.1;Parent=gene-AB25_RS22640;Dbxref=GenBank:WP_000691956.1;Name=WP_000691956.1;gbkey=CDS;gene=yahO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414863.1;locus_tag=AB25_RS22640;product=DUF1471 family periplasmic protein YahO;protein_id=WP_000691956.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 86823 88409 . - . ID=gene-AB25_RS22635;Name=prpR;gbkey=Gene;gene=prpR;gene_biotype=protein_coding;locus_tag=AB25_RS22635;old_locus_tag=AB25_0389 NZ_JJMC01000006.1 Protein Homology CDS 86823 88409 . - 0 ID=cds-WP_000941039.1;Parent=gene-AB25_RS22635;Dbxref=GenBank:WP_000941039.1;Name=WP_000941039.1;gbkey=CDS;gene=prpR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414864.1;locus_tag=AB25_RS22635;product=propionate catabolism operon regulatory protein PrpR;protein_id=WP_000941039.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 88647 89537 . + . ID=gene-AB25_RS22630;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=AB25_RS22630;old_locus_tag=AB25_0390 NZ_JJMC01000006.1 Protein Homology CDS 88647 89537 . + 0 ID=cds-WP_000052202.1;Parent=gene-AB25_RS22630;Dbxref=GenBank:WP_000052202.1;Name=WP_000052202.1;Ontology_term=GO:0019629,GO:0046421;gbkey=CDS;gene=prpB;go_function=methylisocitrate lyase activity|0046421||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414865.1;locus_tag=AB25_RS22630;product=methylisocitrate lyase;protein_id=WP_000052202.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 89582 90751 . + . ID=gene-AB25_RS22625;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=AB25_RS22625;old_locus_tag=AB25_0391 NZ_JJMC01000006.1 Protein Homology CDS 89582 90751 . + 0 ID=cds-WP_001285909.1;Parent=gene-AB25_RS22625;Dbxref=GenBank:WP_001285909.1;Name=WP_001285909.1;Ontology_term=GO:0019679,GO:0004108,GO:0050440;gbkey=CDS;gene=prpC;go_function=citrate (Si)-synthase activity|0004108||IEA,2-methylcitrate synthase activity|0050440||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308413.1;locus_tag=AB25_RS22625;product=bifunctional 2-methylcitrate synthase/citrate synthase;protein_id=WP_001285909.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 90785 92236 . + . ID=gene-AB25_RS22620;Name=prpD;gbkey=Gene;gene=prpD;gene_biotype=protein_coding;locus_tag=AB25_RS22620;old_locus_tag=AB25_0392 NZ_JJMC01000006.1 Protein Homology CDS 90785 92236 . + 0 ID=cds-WP_001275861.1;Parent=gene-AB25_RS22620;Dbxref=GenBank:WP_001275861.1;Name=WP_001275861.1;Ontology_term=GO:0019679,GO:0047547,GO:0051537;gbkey=CDS;gene=prpD;go_function=2-methylcitrate dehydratase activity|0047547||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414868.1;locus_tag=AB25_RS22620;product=2-methylcitrate dehydratase;protein_id=WP_001275861.1;transl_table=11 NZ_JJMC01000006.1 RefSeq pseudogene 92276 94161 . + . ID=gene-AB25_RS0124520;Name=prpE;gbkey=Gene;gene=prpE;gene_biotype=pseudogene;locus_tag=AB25_RS0124520;old_locus_tag=AB25_0393;pseudo=true NZ_JJMC01000006.1 Protein Homology CDS 92276 94161 . + 0 ID=cds-AB25_RS0124520;Parent=gene-AB25_RS0124520;Note=frameshifted;Ontology_term=GO:0019629,GO:0050218;gbkey=CDS;gene=prpE;go_function=propionate-CoA ligase activity|0050218||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308415.1;locus_tag=AB25_RS0124520;product=propionate--CoA ligase;pseudo=true;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 94398 95657 . + . ID=gene-AB25_RS22615;Name=codB;gbkey=Gene;gene=codB;gene_biotype=protein_coding;locus_tag=AB25_RS22615;old_locus_tag=AB25_0395 NZ_JJMC01000006.1 Protein Homology CDS 94398 95657 . + 0 ID=cds-WP_000076236.1;Parent=gene-AB25_RS22615;Dbxref=GenBank:WP_000076236.1;Name=WP_000076236.1;Ontology_term=GO:0055085,GO:0015209,GO:0016020;gbkey=CDS;gene=codB;go_component=membrane|0016020||IEA;go_function=cytosine transmembrane transporter activity|0015209||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414870.1;locus_tag=AB25_RS22615;product=cytosine permease;protein_id=WP_000076236.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 95647 96930 . + . ID=gene-AB25_RS22610;Name=codA;gbkey=Gene;gene=codA;gene_biotype=protein_coding;locus_tag=AB25_RS22610;old_locus_tag=AB25_0396 NZ_JJMC01000006.1 Protein Homology CDS 95647 96930 . + 0 ID=cds-WP_001299008.1;Parent=gene-AB25_RS22610;Dbxref=GenBank:WP_001299008.1;Name=WP_001299008.1;gbkey=CDS;gene=codA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308417.1;locus_tag=AB25_RS22610;product=cytosine/isoguanine deaminase;protein_id=WP_001299008.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 96970 97869 . - . ID=gene-AB25_RS22605;Name=cynR;gbkey=Gene;gene=cynR;gene_biotype=protein_coding;locus_tag=AB25_RS22605;old_locus_tag=AB25_0397 NZ_JJMC01000006.1 Protein Homology CDS 96970 97869 . - 0 ID=cds-WP_000952485.1;Parent=gene-AB25_RS22605;Dbxref=GenBank:WP_000952485.1;Name=WP_000952485.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cynR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308418.1;locus_tag=AB25_RS22605;product=transcriptional regulator CynR;protein_id=WP_000952485.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 97979 98638 . + . ID=gene-AB25_RS22600;Name=cynT;gbkey=Gene;gene=cynT;gene_biotype=protein_coding;locus_tag=AB25_RS22600;old_locus_tag=AB25_0398 NZ_JJMC01000006.1 Protein Homology CDS 97979 98638 . + 0 ID=cds-WP_000658652.1;Parent=gene-AB25_RS22600;Dbxref=GenBank:WP_000658652.1;Name=WP_000658652.1;gbkey=CDS;gene=cynT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414873.1;locus_tag=AB25_RS22600;product=carbonic anhydrase CynT;protein_id=WP_000658652.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 98669 99139 . + . ID=gene-AB25_RS22595;Name=cynS;gbkey=Gene;gene=cynS;gene_biotype=protein_coding;locus_tag=AB25_RS22595;old_locus_tag=AB25_0399 NZ_JJMC01000006.1 Protein Homology CDS 98669 99139 . + 0 ID=cds-WP_000616241.1;Parent=gene-AB25_RS22595;Dbxref=GenBank:WP_000616241.1;Name=WP_000616241.1;Ontology_term=GO:0009439,GO:0008824;gbkey=CDS;gene=cynS;go_function=cyanate hydratase activity|0008824||IEA;go_process=cyanate metabolic process|0009439||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308420.1;locus_tag=AB25_RS22595;product=cyanase;protein_id=WP_000616241.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 99145 100326 . + . ID=gene-AB25_RS22590;Name=cynX;gbkey=Gene;gene=cynX;gene_biotype=protein_coding;locus_tag=AB25_RS22590;old_locus_tag=AB25_0400 NZ_JJMC01000006.1 Protein Homology CDS 99145 100326 . + 0 ID=cds-WP_032179803.1;Parent=gene-AB25_RS22590;Dbxref=GenBank:WP_032179803.1;Name=WP_032179803.1;gbkey=CDS;gene=cynX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308421.2;locus_tag=AB25_RS22590;product=cyanate transporter CynX;protein_id=WP_032179803.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 100429 101040 . - . ID=gene-AB25_RS22585;Name=lacA;gbkey=Gene;gene=lacA;gene_biotype=protein_coding;locus_tag=AB25_RS22585;old_locus_tag=AB25_0401 NZ_JJMC01000006.1 Protein Homology CDS 100429 101040 . - 0 ID=cds-WP_001361018.1;Parent=gene-AB25_RS22585;Dbxref=GenBank:WP_001361018.1;Name=WP_001361018.1;gbkey=CDS;gene=lacA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308422.1;locus_tag=AB25_RS22585;product=galactoside O-acetyltransferase;protein_id=WP_001361018.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 101106 102359 . - . ID=gene-AB25_RS22580;Name=lacY;gbkey=Gene;gene=lacY;gene_biotype=protein_coding;locus_tag=AB25_RS22580;old_locus_tag=AB25_0402 NZ_JJMC01000006.1 Protein Homology CDS 101106 102359 . - 0 ID=cds-WP_032170586.1;Parent=gene-AB25_RS22580;Dbxref=GenBank:WP_032170586.1;Name=WP_032170586.1;gbkey=CDS;gene=lacY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414877.1;locus_tag=AB25_RS22580;product=lactose permease;protein_id=WP_032170586.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 102411 105485 . - . ID=gene-AB25_RS22575;Name=lacZ;gbkey=Gene;gene=lacZ;gene_biotype=protein_coding;locus_tag=AB25_RS22575;old_locus_tag=AB25_0403 NZ_JJMC01000006.1 Protein Homology CDS 102411 105485 . - 0 ID=cds-WP_000177931.1;Parent=gene-AB25_RS22575;Dbxref=GenBank:WP_000177931.1;Name=WP_000177931.1;gbkey=CDS;gene=lacZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414878.1;locus_tag=AB25_RS22575;product=beta-galactosidase;protein_id=WP_000177931.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 105608 106690 . - . ID=gene-AB25_RS22570;Name=lacI;gbkey=Gene;gene=lacI;gene_biotype=protein_coding;locus_tag=AB25_RS22570;old_locus_tag=AB25_0404 NZ_JJMC01000006.1 Protein Homology CDS 105608 106690 . - 0 ID=cds-WP_000805902.1;Parent=gene-AB25_RS22570;Dbxref=GenBank:WP_000805902.1;Name=WP_000805902.1;gbkey=CDS;gene=lacI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414879.3;locus_tag=AB25_RS22570;product=DNA-binding transcriptional repressor LacI;protein_id=WP_000805902.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 106767 107600 . - . ID=gene-AB25_RS22565;Name=mhpR;gbkey=Gene;gene=mhpR;gene_biotype=protein_coding;locus_tag=AB25_RS22565;old_locus_tag=AB25_0405 NZ_JJMC01000006.1 Protein Homology CDS 106767 107600 . - 0 ID=cds-WP_001306931.1;Parent=gene-AB25_RS22565;Dbxref=GenBank:WP_001306931.1;Name=WP_001306931.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=mhpR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414880.2;locus_tag=AB25_RS22565;product=DNA-binding transcriptional regulator;protein_id=WP_001306931.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 107791 109455 . + . ID=gene-AB25_RS22560;Name=mhpA;gbkey=Gene;gene=mhpA;gene_biotype=protein_coding;locus_tag=AB25_RS22560;old_locus_tag=AB25_0406 NZ_JJMC01000006.1 Protein Homology CDS 107791 109455 . + 0 ID=cds-WP_001007454.1;Parent=gene-AB25_RS22560;Dbxref=GenBank:WP_001007454.1;Name=WP_001007454.1;Ontology_term=GO:0019622,GO:0008688;gbkey=CDS;gene=mhpA;go_function=3-(3-hydroxyphenyl)propionate hydroxylase activity|0008688||IEA;go_process=3-(3-hydroxy)phenylpropionate catabolic process|0019622||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308429.1;locus_tag=AB25_RS22560;product=bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;protein_id=WP_001007454.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 109457 110401 . + . ID=gene-AB25_RS22555;Name=mhpB;gbkey=Gene;gene=mhpB;gene_biotype=protein_coding;locus_tag=AB25_RS22555;old_locus_tag=AB25_0407 NZ_JJMC01000006.1 Protein Homology CDS 109457 110401 . + 0 ID=cds-WP_000543459.1;Parent=gene-AB25_RS22555;Dbxref=GenBank:WP_000543459.1;Name=WP_000543459.1;gbkey=CDS;gene=mhpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308430.1;locus_tag=AB25_RS22555;product=2%2C3-dihydroxyphenylpropionate/2%2C3-dihydroxicinnamic acid 1%2C2-dioxygenase;protein_id=WP_000543459.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 110419 111285 . + . ID=gene-AB25_RS22550;Name=mhpC;gbkey=Gene;gene=mhpC;gene_biotype=protein_coding;locus_tag=AB25_RS22550;old_locus_tag=AB25_0408 NZ_JJMC01000006.1 Protein Homology CDS 110419 111285 . + 0 ID=cds-WP_000121889.1;Parent=gene-AB25_RS22550;Dbxref=GenBank:WP_000121889.1;Name=WP_000121889.1;gbkey=CDS;gene=mhpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414883.5;locus_tag=AB25_RS22550;product=2-hydroxy-6-oxonona-2%2C4-dienedioate hydrolase;protein_id=WP_000121889.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 111295 112104 . + . ID=gene-AB25_RS22545;Name=mhpD;gbkey=Gene;gene=mhpD;gene_biotype=protein_coding;locus_tag=AB25_RS22545;old_locus_tag=AB25_0409 NZ_JJMC01000006.1 Protein Homology CDS 111295 112104 . + 0 ID=cds-WP_000160734.1;Parent=gene-AB25_RS22545;Dbxref=GenBank:WP_000160734.1;Name=WP_000160734.1;gbkey=CDS;gene=mhpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308432.2;locus_tag=AB25_RS22545;product=2-keto-4-pentenoate hydratase;protein_id=WP_000160734.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 112101 113051 . + . ID=gene-AB25_RS22540;Name=mhpF;gbkey=Gene;gene=mhpF;gene_biotype=protein_coding;locus_tag=AB25_RS22540;old_locus_tag=AB25_0410 NZ_JJMC01000006.1 Protein Homology CDS 112101 113051 . + 0 ID=cds-WP_032170587.1;Parent=gene-AB25_RS22540;Dbxref=GenBank:WP_032170587.1;Name=WP_032170587.1;gbkey=CDS;gene=mhpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414885.1;locus_tag=AB25_RS22540;product=acetaldehyde dehydrogenase;protein_id=WP_032170587.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 113048 114061 . + . ID=gene-AB25_RS22535;Name=mhpE;gbkey=Gene;gene=mhpE;gene_biotype=protein_coding;locus_tag=AB25_RS22535;old_locus_tag=AB25_0411 NZ_JJMC01000006.1 Protein Homology CDS 113048 114061 . + 0 ID=cds-WP_001013496.1;Parent=gene-AB25_RS22535;Dbxref=GenBank:WP_001013496.1;Name=WP_001013496.1;gbkey=CDS;gene=mhpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414886.1;locus_tag=AB25_RS22535;product=4-hydroxy-2-oxovalerate aldolase;protein_id=WP_001013496.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 114237 115448 . + . ID=gene-AB25_RS22530;Name=mhpT;gbkey=Gene;gene=mhpT;gene_biotype=protein_coding;locus_tag=AB25_RS22530;old_locus_tag=AB25_0412 NZ_JJMC01000006.1 Protein Homology CDS 114237 115448 . + 0 ID=cds-WP_000107624.1;Parent=gene-AB25_RS22530;Dbxref=GenBank:WP_000107624.1;Name=WP_000107624.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mhpT;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308435.2;locus_tag=AB25_RS22530;product=3-(3-hydroxy-phenyl)propionate transporter MhpT;protein_id=WP_000107624.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 115550 116089 . + . ID=gene-AB25_RS22525;Name=yaiL;gbkey=Gene;gene=yaiL;gene_biotype=protein_coding;locus_tag=AB25_RS22525;old_locus_tag=AB25_0413 NZ_JJMC01000006.1 Protein Homology CDS 115550 116089 . + 0 ID=cds-WP_001096705.1;Parent=gene-AB25_RS22525;Dbxref=GenBank:WP_001096705.1;Name=WP_001096705.1;gbkey=CDS;gene=yaiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414888.4;locus_tag=AB25_RS22525;product=DUF2058 domain-containing protein;protein_id=WP_001096705.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 116214 117047 . - . ID=gene-AB25_RS22520;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=AB25_RS22520;old_locus_tag=AB25_0414 NZ_JJMC01000006.1 Protein Homology CDS 116214 117047 . - 0 ID=cds-WP_000419049.1;Parent=gene-AB25_RS22520;Dbxref=GenBank:WP_000419049.1;Name=WP_000419049.1;Ontology_term=GO:0046294,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde catabolic process|0046294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414889.1;locus_tag=AB25_RS22520;product=S-formylglutathione hydrolase;protein_id=WP_000419049.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 117140 118249 . - . ID=gene-AB25_RS22515;Name=frmA;gbkey=Gene;gene=frmA;gene_biotype=protein_coding;locus_tag=AB25_RS22515;old_locus_tag=AB25_0415 NZ_JJMC01000006.1 Protein Homology CDS 117140 118249 . - 0 ID=cds-WP_000842102.1;Parent=gene-AB25_RS22515;Dbxref=GenBank:WP_000842102.1;Name=WP_000842102.1;gbkey=CDS;gene=frmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308438.1;locus_tag=AB25_RS22515;product=S-(hydroxymethyl)glutathione dehydrogenase;protein_id=WP_000842102.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 118284 118559 . - . ID=gene-AB25_RS22510;Name=frmR;gbkey=Gene;gene=frmR;gene_biotype=protein_coding;locus_tag=AB25_RS22510;old_locus_tag=AB25_0416 NZ_JJMC01000006.1 Protein Homology CDS 118284 118559 . - 0 ID=cds-WP_001141271.1;Parent=gene-AB25_RS22510;Dbxref=GenBank:WP_001141271.1;Name=WP_001141271.1;gbkey=CDS;gene=frmR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414891.4;locus_tag=AB25_RS22510;product=formaldehyde-responsive transcriptional repressor FrmR;protein_id=WP_001141271.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 118744 119517 . - . ID=gene-AB25_RS22505;Name=yaiO;gbkey=Gene;gene=yaiO;gene_biotype=protein_coding;locus_tag=AB25_RS22505;old_locus_tag=AB25_0417 NZ_JJMC01000006.1 Protein Homology CDS 118744 119517 . - 0 ID=cds-WP_032170589.1;Parent=gene-AB25_RS22505;Dbxref=GenBank:WP_032170589.1;Name=WP_032170589.1;gbkey=CDS;gene=yaiO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414892.1;locus_tag=AB25_RS22505;product=YaiO family outer membrane beta-barrel protein;protein_id=WP_032170589.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 119519 120100 . - . ID=gene-AB25_RS22500;Name=AB25_RS22500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS22500;old_locus_tag=AB25_0418 NZ_JJMC01000006.1 Protein Homology CDS 119519 120100 . - 0 ID=cds-WP_024194469.1;Parent=gene-AB25_RS22500;Dbxref=GenBank:WP_024194469.1;Name=WP_024194469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001308433.1;locus_tag=AB25_RS22500;product=acetyltransferase;protein_id=WP_024194469.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 120078 121274 . - . ID=gene-AB25_RS22495;Name=yaiP;gbkey=Gene;gene=yaiP;gene_biotype=protein_coding;locus_tag=AB25_RS22495;old_locus_tag=AB25_0419 NZ_JJMC01000006.1 Protein Homology CDS 120078 121274 . - 0 ID=cds-WP_000860446.1;Parent=gene-AB25_RS22495;Dbxref=GenBank:WP_000860446.1;Name=WP_000860446.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;gene=yaiP;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414897.1;locus_tag=AB25_RS22495;product=glycosyltransferase;protein_id=WP_000860446.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 121299 121418 . + . ID=gene-AB25_RS32895;Name=AB25_RS32895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32895 NZ_JJMC01000006.1 Protein Homology CDS 121299 121418 . + 0 ID=cds-WP_123059036.1;Parent=gene-AB25_RS32895;Dbxref=GenBank:WP_123059036.1;Name=WP_123059036.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048625.1;locus_tag=AB25_RS32895;product=hypothetical protein;protein_id=WP_123059036.1;transl_table=11 NZ_JJMC01000006.1 RefSeq pseudogene 121545 121955 . - . ID=gene-AB25_RS32900;Name=AB25_RS32900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32900;partial=true;pseudo=true;start_range=.,121545 NZ_JJMC01000006.1 Protein Homology CDS 121545 121955 . - 0 ID=cds-AB25_RS32900;Parent=gene-AB25_RS32900;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0019213;gbkey=CDS;go_function=deacetylase activity|0019213||IEA;inference=COORDINATES: protein motif:HMM:NF014625.6;locus_tag=AB25_RS32900;partial=true;product=PIG-L deacetylase family protein;pseudo=true;start_range=.,121545;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 122571 123533 . + . ID=gene-AB25_RS22485;Name=tauA;gbkey=Gene;gene=tauA;gene_biotype=protein_coding;locus_tag=AB25_RS22485;old_locus_tag=AB25_0422 NZ_JJMC01000006.1 Protein Homology CDS 122571 123533 . + 0 ID=cds-WP_001306933.1;Parent=gene-AB25_RS22485;Dbxref=GenBank:WP_001306933.1;Name=WP_001306933.1;Ontology_term=GO:0055085,GO:0015411,GO:0042597,GO:0043190;gbkey=CDS;gene=tauA;go_component=periplasmic space|0042597||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type taurine transporter transporter activity|0015411||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414899.2;locus_tag=AB25_RS22485;product=taurine ABC transporter substrate-binding protein;protein_id=WP_001306933.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 123546 124313 . + . ID=gene-AB25_RS22480;Name=tauB;gbkey=Gene;gene=tauB;gene_biotype=protein_coding;locus_tag=AB25_RS22480;old_locus_tag=AB25_0423 NZ_JJMC01000006.1 Protein Homology CDS 123546 124313 . + 0 ID=cds-WP_000939350.1;Parent=gene-AB25_RS22480;Dbxref=GenBank:WP_000939350.1;Name=WP_000939350.1;Ontology_term=GO:0005524,GO:0015411,GO:0016020;gbkey=CDS;gene=tauB;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type taurine transporter transporter activity|0015411||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414900.1;locus_tag=AB25_RS22480;product=taurine ABC transporter ATP-binding subunit;protein_id=WP_000939350.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 124310 125137 . + . ID=gene-AB25_RS22475;Name=tauC;gbkey=Gene;gene=tauC;gene_biotype=protein_coding;locus_tag=AB25_RS22475;old_locus_tag=AB25_0424 NZ_JJMC01000006.1 Protein Homology CDS 124310 125137 . + 0 ID=cds-WP_000114584.1;Parent=gene-AB25_RS22475;Dbxref=GenBank:WP_000114584.1;Name=WP_000114584.1;Ontology_term=GO:0055085,GO:0015411,GO:0016020;gbkey=CDS;gene=tauC;go_component=membrane|0016020||IEA;go_function=ABC-type taurine transporter transporter activity|0015411||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308448.1;locus_tag=AB25_RS22475;product=taurine ABC transporter permease TauC;protein_id=WP_000114584.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 125134 125985 . + . ID=gene-AB25_RS22470;Name=tauD;gbkey=Gene;gene=tauD;gene_biotype=protein_coding;locus_tag=AB25_RS22470;old_locus_tag=AB25_0425 NZ_JJMC01000006.1 Protein Homology CDS 125134 125985 . + 0 ID=cds-WP_000004024.1;Parent=gene-AB25_RS22470;Dbxref=GenBank:WP_000004024.1;Name=WP_000004024.1;Ontology_term=GO:0016491;gbkey=CDS;gene=tauD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308449.1;locus_tag=AB25_RS22470;product=taurine dioxygenase;protein_id=WP_000004024.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 126091 127065 . - . ID=gene-AB25_RS22465;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=AB25_RS22465;old_locus_tag=AB25_0426 NZ_JJMC01000006.1 Protein Homology CDS 126091 127065 . - 0 ID=cds-WP_001295337.1;Parent=gene-AB25_RS22465;Dbxref=GenBank:WP_001295337.1;Name=WP_001295337.1;Ontology_term=GO:0033014,GO:0004655;gbkey=CDS;gene=hemB;go_function=porphobilinogen synthase activity|0004655||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308450.2;locus_tag=AB25_RS22465;product=porphobilinogen synthase;protein_id=WP_001295337.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 127589 130540 . + . ID=gene-AB25_RS22460;Name=AB25_RS22460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS22460;old_locus_tag=AB25_0428 NZ_JJMC01000006.1 Protein Homology CDS 127589 130540 . + 0 ID=cds-WP_000556427.1;Parent=gene-AB25_RS22460;Dbxref=GenBank:WP_000556427.1;Name=WP_000556427.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399980.1;locus_tag=AB25_RS22460;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_000556427.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 130628 131251 . + . ID=gene-AB25_RS22455;Name=iprA;gbkey=Gene;gene=iprA;gene_biotype=protein_coding;locus_tag=AB25_RS22455;old_locus_tag=AB25_0429 NZ_JJMC01000006.1 Protein Homology CDS 130628 131251 . + 0 ID=cds-WP_001295335.1;Parent=gene-AB25_RS22455;Dbxref=GenBank:WP_001295335.1;Name=WP_001295335.1;gbkey=CDS;gene=iprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414909.2;locus_tag=AB25_RS22455;product=hydrogen peroxide resistance inhibitor IprA;protein_id=WP_001295335.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 131252 132409 . - . ID=gene-AB25_RS22450;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=protein_coding;locus_tag=AB25_RS22450;old_locus_tag=AB25_0430 NZ_JJMC01000006.1 Protein Homology CDS 131252 132409 . - 0 ID=cds-WP_000830742.1;Parent=gene-AB25_RS22450;Dbxref=GenBank:WP_000830742.1;Name=WP_000830742.1;gbkey=CDS;gene=ampH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308453.1;locus_tag=AB25_RS22450;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;protein_id=WP_000830742.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 132761 133981 . + . ID=gene-AB25_RS22440;Name=sbmA;gbkey=Gene;gene=sbmA;gene_biotype=protein_coding;locus_tag=AB25_RS22440;old_locus_tag=AB25_0432 NZ_JJMC01000006.1 Protein Homology CDS 132761 133981 . + 0 ID=cds-WP_032170591.1;Parent=gene-AB25_RS22440;Dbxref=GenBank:WP_032170591.1;Name=WP_032170591.1;Ontology_term=GO:0015833,GO:1904680;gbkey=CDS;gene=sbmA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308454.1;locus_tag=AB25_RS22440;product=peptide antibiotic transporter SbmA;protein_id=WP_032170591.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 133994 135088 . + . ID=gene-AB25_RS22435;Name=yaiW;gbkey=Gene;gene=yaiW;gene_biotype=protein_coding;locus_tag=AB25_RS22435;old_locus_tag=AB25_0433 NZ_JJMC01000006.1 Protein Homology CDS 133994 135088 . + 0 ID=cds-WP_000092078.1;Parent=gene-AB25_RS22435;Dbxref=GenBank:WP_000092078.1;Name=WP_000092078.1;gbkey=CDS;gene=yaiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414912.1;locus_tag=AB25_RS22435;product=surface-exposed outer membrane lipoprotein YaiW;protein_id=WP_000092078.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 135147 135455 . - . ID=gene-AB25_RS22430;Name=yaiY;gbkey=Gene;gene=yaiY;gene_biotype=protein_coding;locus_tag=AB25_RS22430;old_locus_tag=AB25_0434 NZ_JJMC01000006.1 Protein Homology CDS 135147 135455 . - 0 ID=cds-WP_000763151.1;Parent=gene-AB25_RS22430;Dbxref=GenBank:WP_000763151.1;Name=WP_000763151.1;gbkey=CDS;gene=yaiY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308456.1;locus_tag=AB25_RS22430;product=YaiY family protein;protein_id=WP_000763151.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 135715 135927 . + . ID=gene-AB25_RS30960;Name=yaiZ;gbkey=Gene;gene=yaiZ;gene_biotype=protein_coding;locus_tag=AB25_RS30960;old_locus_tag=AB25_0435 NZ_JJMC01000006.1 Protein Homology CDS 135715 135927 . + 0 ID=cds-WP_001295334.1;Parent=gene-AB25_RS30960;Dbxref=GenBank:WP_001295334.1;Name=WP_001295334.1;gbkey=CDS;gene=yaiZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414914.2;locus_tag=AB25_RS30960;product=DUF2754 domain-containing protein;protein_id=WP_001295334.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 135951 137045 . - . ID=gene-AB25_RS22420;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=AB25_RS22420;old_locus_tag=AB25_0436 NZ_JJMC01000006.1 Protein Homology CDS 135951 137045 . - 0 ID=cds-WP_000413677.1;Parent=gene-AB25_RS22420;Dbxref=GenBank:WP_000413677.1;Name=WP_000413677.1;Ontology_term=GO:0008716;gbkey=CDS;gene=ddlA;go_function=D-alanine-D-alanine ligase activity|0008716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308458.1;locus_tag=AB25_RS22420;product=D-alanine--D-alanine ligase;protein_id=WP_000413677.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 137123 137326 . + . ID=gene-AB25_RS22415;Name=AB25_RS22415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS22415;old_locus_tag=AB25_0437 NZ_JJMC01000006.1 Protein Homology CDS 137123 137326 . + 0 ID=cds-WP_001300669.1;Parent=gene-AB25_RS22415;Dbxref=GenBank:WP_001300669.1;Name=WP_001300669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439229.1;locus_tag=AB25_RS22415;product=hypothetical protein;protein_id=WP_001300669.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 137508 137768 . + . ID=gene-AB25_RS22410;Name=iraP;gbkey=Gene;gene=iraP;gene_biotype=protein_coding;locus_tag=AB25_RS22410;old_locus_tag=AB25_0438 NZ_JJMC01000006.1 Protein Homology CDS 137508 137768 . + 0 ID=cds-WP_000792970.1;Parent=gene-AB25_RS22410;Dbxref=GenBank:WP_000792970.1;Name=WP_000792970.1;gbkey=CDS;gene=iraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308459.1;locus_tag=AB25_RS22410;product=anti-adapter protein IraP;protein_id=WP_000792970.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 137869 139284 . + . ID=gene-AB25_RS22405;Name=phoA;gbkey=Gene;gene=phoA;gene_biotype=protein_coding;locus_tag=AB25_RS22405;old_locus_tag=AB25_0439 NZ_JJMC01000006.1 Protein Homology CDS 137869 139284 . + 0 ID=cds-WP_001356231.1;Parent=gene-AB25_RS22405;Dbxref=GenBank:WP_001356231.1;Name=WP_001356231.1;Ontology_term=GO:0016791;gbkey=CDS;gene=phoA;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414917.2;locus_tag=AB25_RS22405;product=alkaline phosphatase;protein_id=WP_001356231.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 139403 139723 . + . ID=gene-AB25_RS22400;Name=psiF;gbkey=Gene;gene=psiF;gene_biotype=protein_coding;locus_tag=AB25_RS22400;old_locus_tag=AB25_0440 NZ_JJMC01000006.1 Protein Homology CDS 139403 139723 . + 0 ID=cds-WP_001295332.1;Parent=gene-AB25_RS22400;Dbxref=GenBank:WP_001295332.1;Name=WP_001295332.1;gbkey=CDS;gene=psiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414918.4;locus_tag=AB25_RS22400;product=phosphate starvation-inducible protein PsiF;protein_id=WP_001295332.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 139825 140940 . + . ID=gene-AB25_RS22395;Name=adrA;gbkey=Gene;gene=adrA;gene_biotype=protein_coding;gene_synonym=dgcC;locus_tag=AB25_RS22395;old_locus_tag=AB25_0441 NZ_JJMC01000006.1 Protein Homology CDS 139825 140940 . + 0 ID=cds-WP_000484048.1;Parent=gene-AB25_RS22395;Dbxref=GenBank:WP_000484048.1;Name=WP_000484048.1;gbkey=CDS;gene=adrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414919.1;locus_tag=AB25_RS22395;product=diguanylate cyclase AdrA;protein_id=WP_000484048.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 140957 141766 . - . ID=gene-AB25_RS22390;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=AB25_RS22390;old_locus_tag=AB25_0442 NZ_JJMC01000006.1 Protein Homology CDS 140957 141766 . - 0 ID=cds-WP_001295331.1;Parent=gene-AB25_RS22390;Dbxref=GenBank:WP_001295331.1;Name=WP_001295331.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414920.1;locus_tag=AB25_RS22390;product=pyrroline-5-carboxylate reductase;protein_id=WP_001295331.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 141886 142350 . + . ID=gene-AB25_RS22385;Name=yaiI;gbkey=Gene;gene=yaiI;gene_biotype=protein_coding;locus_tag=AB25_RS22385;old_locus_tag=AB25_0443 NZ_JJMC01000006.1 Protein Homology CDS 141886 142350 . + 0 ID=cds-WP_000158153.1;Parent=gene-AB25_RS22385;Dbxref=GenBank:WP_000158153.1;Name=WP_000158153.1;gbkey=CDS;gene=yaiI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001619195.1;locus_tag=AB25_RS22385;product=YaiI/YqxD family protein;protein_id=WP_000158153.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 142527 143051 . + . ID=gene-AB25_RS22380;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=AB25_RS22380;old_locus_tag=AB25_0444 NZ_JJMC01000006.1 Protein Homology CDS 142527 143051 . + 0 ID=cds-WP_000193393.1;Parent=gene-AB25_RS22380;Dbxref=GenBank:WP_000193393.1;Name=WP_000193393.1;Ontology_term=GO:0009073,GO:0004765;gbkey=CDS;gene=aroL;go_function=shikimate kinase activity|0004765||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308465.1;locus_tag=AB25_RS22380;product=shikimate kinase AroL;protein_id=WP_000193393.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 143101 143292 . + . ID=gene-AB25_RS22375;Name=yaiA;gbkey=Gene;gene=yaiA;gene_biotype=protein_coding;locus_tag=AB25_RS22375;old_locus_tag=AB25_0445 NZ_JJMC01000006.1 Protein Homology CDS 143101 143292 . + 0 ID=cds-WP_001142439.1;Parent=gene-AB25_RS22375;Dbxref=GenBank:WP_001142439.1;Name=WP_001142439.1;gbkey=CDS;gene=yaiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308466.1;locus_tag=AB25_RS22375;product=protein YaiA;protein_id=WP_001142439.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 143550 144227 . + . ID=gene-AB25_RS22370;Name=aroM;gbkey=Gene;gene=aroM;gene_biotype=protein_coding;locus_tag=AB25_RS22370;old_locus_tag=AB25_0446 NZ_JJMC01000006.1 Protein Homology CDS 143550 144227 . + 0 ID=cds-WP_001276425.1;Parent=gene-AB25_RS22370;Dbxref=GenBank:WP_001276425.1;Name=WP_001276425.1;gbkey=CDS;gene=aroM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414924.1;locus_tag=AB25_RS22370;product=AroM family protein;protein_id=WP_001276425.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 144299 144583 . + . ID=gene-AB25_RS22365;Name=ppnP;gbkey=Gene;gene=ppnP;gene_biotype=protein_coding;locus_tag=AB25_RS22365;old_locus_tag=AB25_0447 NZ_JJMC01000006.1 Protein Homology CDS 144299 144583 . + 0 ID=cds-WP_000941942.1;Parent=gene-AB25_RS22365;Dbxref=GenBank:WP_000941942.1;Name=WP_000941942.1;gbkey=CDS;gene=ppnP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308468.1;locus_tag=AB25_RS22365;product=pyrimidine/purine nucleoside phosphorylase;protein_id=WP_000941942.1;transl_table=11 NZ_JJMC01000006.1 RefSeq pseudogene 144738 145073 . + . ID=gene-AB25_RS22360;Name=AB25_RS22360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS22360;old_locus_tag=AB25_0448;partial=true;pseudo=true;start_range=.,144738 NZ_JJMC01000006.1 Protein Homology CDS 144738 145073 . + 0 ID=cds-AB25_RS22360;Parent=gene-AB25_RS22360;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308469.2;locus_tag=AB25_RS22360;partial=true;product=DUF2773 domain-containing protein;pseudo=true;start_range=.,144738;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 145070 145153 . + . ID=gene-AB25_RS31600;Name=AB25_RS31600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31600 NZ_JJMC01000006.1 Protein Homology CDS 145070 145153 . + 0 ID=cds-WP_122633145.1;Parent=gene-AB25_RS31600;Dbxref=GenBank:WP_122633145.1;Name=WP_122633145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518750.1;locus_tag=AB25_RS31600;product=hypothetical protein;protein_id=WP_122633145.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 145231 146142 . - . ID=gene-AB25_RS22355;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=AB25_RS22355;old_locus_tag=AB25_0449 NZ_JJMC01000006.1 Protein Homology CDS 145231 146142 . - 0 ID=cds-WP_001298537.1;Parent=gene-AB25_RS22355;Dbxref=GenBank:WP_001298537.1;Name=WP_001298537.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120935.1;locus_tag=AB25_RS22355;product=recombination-associated protein RdgC;protein_id=WP_001298537.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 146267 147175 . + . ID=gene-AB25_RS22350;Name=mak;gbkey=Gene;gene=mak;gene_biotype=protein_coding;locus_tag=AB25_RS22350;old_locus_tag=AB25_0450 NZ_JJMC01000006.1 Protein Homology CDS 146267 147175 . + 0 ID=cds-WP_001219312.1;Parent=gene-AB25_RS22350;Dbxref=GenBank:WP_001219312.1;Name=WP_001219312.1;gbkey=CDS;gene=mak;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414928.2;locus_tag=AB25_RS22350;product=fructokinase;protein_id=WP_001219312.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 147318 148502 . - . ID=gene-AB25_RS22345;Name=araJ;gbkey=Gene;gene=araJ;gene_biotype=protein_coding;locus_tag=AB25_RS22345;old_locus_tag=AB25_0451 NZ_JJMC01000006.1 Protein Homology CDS 147318 148502 . - 0 ID=cds-WP_000755825.1;Parent=gene-AB25_RS22345;Dbxref=GenBank:WP_000755825.1;Name=WP_000755825.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=araJ;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414930.3;locus_tag=AB25_RS22345;product=MFS transporter AraJ;protein_id=WP_000755825.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 148628 151771 . - . ID=gene-AB25_RS22340;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=AB25_RS22340;old_locus_tag=AB25_0452 NZ_JJMC01000006.1 Protein Homology CDS 148628 151771 . - 0 ID=cds-WP_000698926.1;Parent=gene-AB25_RS22340;Dbxref=GenBank:WP_000698926.1;Name=WP_000698926.1;Ontology_term=GO:0006260,GO:0004527;gbkey=CDS;gene=sbcC;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706285.1;locus_tag=AB25_RS22340;product=exonuclease subunit SbcC;protein_id=WP_000698926.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 151768 152970 . - . ID=gene-AB25_RS22335;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=AB25_RS22335;old_locus_tag=AB25_0453 NZ_JJMC01000006.1 Protein Homology CDS 151768 152970 . - 0 ID=cds-WP_001221319.1;Parent=gene-AB25_RS22335;Dbxref=GenBank:WP_001221319.1;Name=WP_001221319.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcD;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308475.1;locus_tag=AB25_RS22335;product=exonuclease subunit SbcD;protein_id=WP_001221319.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 153160 153849 . + . ID=gene-AB25_RS22330;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=AB25_RS22330;old_locus_tag=AB25_0455 NZ_JJMC01000006.1 Protein Homology CDS 153160 153849 . + 0 ID=cds-WP_000113933.1;Parent=gene-AB25_RS22330;Dbxref=GenBank:WP_000113933.1;Name=WP_000113933.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=AB25_RS22330;product=phosphate response regulator transcription factor PhoB;protein_id=WP_000113933.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 153907 155202 . + . ID=gene-AB25_RS22325;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=AB25_RS22325;old_locus_tag=AB25_0456 NZ_JJMC01000006.1 Protein Homology CDS 153907 155202 . + 0 ID=cds-WP_000893611.1;Parent=gene-AB25_RS22325;Dbxref=GenBank:WP_000893611.1;Name=WP_000893611.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0004721,GO:0016020;gbkey=CDS;gene=phoR;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphoprotein phosphatase activity|0004721||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706288.1;locus_tag=AB25_RS22325;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_000893611.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 155609 156928 . + . ID=gene-AB25_RS22320;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=AB25_RS22320;old_locus_tag=AB25_0458 NZ_JJMC01000006.1 Protein Homology CDS 155609 156928 . + 0 ID=cds-WP_000149639.1;Parent=gene-AB25_RS22320;Dbxref=GenBank:WP_000149639.1;Name=WP_000149639.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308478.1;locus_tag=AB25_RS22320;product=branched-chain amino acid transporter carrier protein BrnQ;protein_id=WP_000149639.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 157004 158377 . + . ID=gene-AB25_RS22315;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=AB25_RS22315;old_locus_tag=AB25_0459 NZ_JJMC01000006.1 Protein Homology CDS 157004 158377 . + 0 ID=cds-WP_032288539.1;Parent=gene-AB25_RS22315;Dbxref=GenBank:WP_032288539.1;Name=WP_032288539.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=proY;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308479.1;locus_tag=AB25_RS22315;product=proline-specific permease ProY;protein_id=WP_032288539.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 158533 160350 . + . ID=gene-AB25_RS22310;Name=malZ;gbkey=Gene;gene=malZ;gene_biotype=protein_coding;locus_tag=AB25_RS22310;old_locus_tag=AB25_0460 NZ_JJMC01000006.1 Protein Homology CDS 158533 160350 . + 0 ID=cds-WP_032170594.1;Parent=gene-AB25_RS22310;Dbxref=GenBank:WP_032170594.1;Name=WP_032170594.1;Ontology_term=GO:0005975,GO:0004558;gbkey=CDS;gene=malZ;go_function=alpha-1%2C4-glucosidase activity|0004558||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706291.1;locus_tag=AB25_RS22310;product=maltodextrin glucosidase;protein_id=WP_032170594.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 160355 160936 . - . ID=gene-AB25_RS22305;Name=acpH;gbkey=Gene;gene=acpH;gene_biotype=protein_coding;locus_tag=AB25_RS22305;old_locus_tag=AB25_0461 NZ_JJMC01000006.1 Protein Homology CDS 160355 160936 . - 0 ID=cds-WP_001009884.1;Parent=gene-AB25_RS22305;Dbxref=GenBank:WP_001009884.1;Name=WP_001009884.1;Ontology_term=GO:0006633,GO:0008770;gbkey=CDS;gene=acpH;go_function=[acyl-carrier-protein] phosphodiesterase activity|0008770||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414938.1;locus_tag=AB25_RS22305;product=ACP phosphodiesterase;protein_id=WP_001009884.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 161029 162099 . + . ID=gene-AB25_RS22300;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=AB25_RS22300;old_locus_tag=AB25_0462 NZ_JJMC01000006.1 Protein Homology CDS 161029 162099 . + 0 ID=cds-WP_001266503.1;Parent=gene-AB25_RS22300;Dbxref=GenBank:WP_001266503.1;Name=WP_001266503.1;Ontology_term=GO:0006400,GO:0008616,GO:0051075,GO:0005737;gbkey=CDS;gene=queA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity|0051075||IEA;go_process=tRNA modification|0006400||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308483.1;locus_tag=AB25_RS22300;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_001266503.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 162155 163282 . + . ID=gene-AB25_RS22295;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=AB25_RS22295;old_locus_tag=AB25_0463 NZ_JJMC01000006.1 Protein Homology CDS 162155 163282 . + 0 ID=cds-WP_000667319.1;Parent=gene-AB25_RS22295;Dbxref=GenBank:WP_000667319.1;Name=WP_000667319.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904808.1;locus_tag=AB25_RS22295;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_000667319.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 163305 163637 . + . ID=gene-AB25_RS22290;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=AB25_RS22290;old_locus_tag=AB25_0464 NZ_JJMC01000006.1 Protein Homology CDS 163305 163637 . + 0 ID=cds-WP_000007629.1;Parent=gene-AB25_RS22290;Dbxref=GenBank:WP_000007629.1;Name=WP_000007629.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=AB25_RS22290;product=preprotein translocase subunit YajC;protein_id=WP_000007629.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 163665 165512 . + . ID=gene-AB25_RS22285;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=AB25_RS22285;old_locus_tag=AB25_0465 NZ_JJMC01000006.1 Protein Homology CDS 163665 165512 . + 0 ID=cds-WP_000934822.1;Parent=gene-AB25_RS22285;Dbxref=GenBank:WP_000934822.1;Name=WP_000934822.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=AB25_RS22285;product=protein translocase subunit SecD;protein_id=WP_000934822.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 165523 166494 . + . ID=gene-AB25_RS22280;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=AB25_RS22280;old_locus_tag=AB25_0466 NZ_JJMC01000006.1 Protein Homology CDS 165523 166494 . + 0 ID=cds-WP_000046637.1;Parent=gene-AB25_RS22280;Dbxref=GenBank:WP_000046637.1;Name=WP_000046637.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308487.1;locus_tag=AB25_RS22280;product=protein translocase subunit SecF;protein_id=WP_000046637.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 166623 166970 . + . ID=gene-AB25_RS22275;Name=yajD;gbkey=Gene;gene=yajD;gene_biotype=protein_coding;locus_tag=AB25_RS22275;old_locus_tag=AB25_0467 NZ_JJMC01000006.1 Protein Homology CDS 166623 166970 . + 0 ID=cds-WP_000974813.1;Parent=gene-AB25_RS22275;Dbxref=GenBank:WP_000974813.1;Name=WP_000974813.1;gbkey=CDS;gene=yajD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308490.1;locus_tag=AB25_RS22275;product=HNH nuclease YajD;protein_id=WP_000974813.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 167147 168031 . - . ID=gene-AB25_RS22270;Name=tsx;gbkey=Gene;gene=tsx;gene_biotype=protein_coding;locus_tag=AB25_RS22270;old_locus_tag=AB25_0468 NZ_JJMC01000006.1 Protein Homology CDS 167147 168031 . - 0 ID=cds-WP_001295328.1;Parent=gene-AB25_RS22270;Dbxref=GenBank:WP_001295328.1;Name=WP_001295328.1;gbkey=CDS;gene=tsx;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308491.1;locus_tag=AB25_RS22270;product=nucleoside-specific channel-forming protein Tsx;protein_id=WP_001295328.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 168330 168869 . - . ID=gene-AB25_RS22265;Name=yajI;gbkey=Gene;gene=yajI;gene_biotype=protein_coding;locus_tag=AB25_RS22265;old_locus_tag=AB25_0469 NZ_JJMC01000006.1 Protein Homology CDS 168330 168869 . - 0 ID=cds-WP_001295327.1;Parent=gene-AB25_RS22265;Dbxref=GenBank:WP_001295327.1;Name=WP_001295327.1;gbkey=CDS;gene=yajI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414946.4;locus_tag=AB25_RS22265;product=DUF3251 domain-containing protein;protein_id=WP_001295327.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 169020 169469 . + . ID=gene-AB25_RS0124540;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=AB25_RS0124540;old_locus_tag=AB25_0470 NZ_JJMC01000006.1 Protein Homology CDS 169020 169469 . + 0 ID=cds-WP_000543535.1;Parent=gene-AB25_RS0124540;Dbxref=GenBank:WP_000543535.1;Name=WP_000543535.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=AB25_RS0124540;product=transcriptional regulator NrdR;protein_id=WP_000543535.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 169473 170576 . + . ID=gene-AB25_RS22260;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=AB25_RS22260;old_locus_tag=AB25_0471 NZ_JJMC01000006.1 Protein Homology CDS 169473 170576 . + 0 ID=cds-WP_032215097.1;Parent=gene-AB25_RS22260;Dbxref=GenBank:WP_032215097.1;Name=WP_032215097.1;Ontology_term=GO:0008270,GO:0008703,GO:0008835,GO:0050661;gbkey=CDS;gene=ribD;go_function=zinc ion binding|0008270||IEA,5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706302.1;locus_tag=AB25_RS22260;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_032215097.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 170665 171135 . + . ID=gene-AB25_RS22255;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=AB25_RS22255;old_locus_tag=AB25_0472 NZ_JJMC01000006.1 Protein Homology CDS 170665 171135 . + 0 ID=cds-WP_001021161.1;Parent=gene-AB25_RS22255;Dbxref=GenBank:WP_001021161.1;Name=WP_001021161.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818760.1;locus_tag=AB25_RS22255;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_001021161.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 171155 171574 . + . ID=gene-AB25_RS22250;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=AB25_RS22250;old_locus_tag=AB25_0473 NZ_JJMC01000006.1 Protein Homology CDS 171155 171574 . + 0 ID=cds-WP_000801125.1;Parent=gene-AB25_RS22250;Dbxref=GenBank:WP_000801125.1;Name=WP_000801125.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308496.1;locus_tag=AB25_RS22250;product=transcription antitermination factor NusB;protein_id=WP_000801125.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 171652 172629 . + . ID=gene-AB25_RS22245;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=AB25_RS22245;old_locus_tag=AB25_0474 NZ_JJMC01000006.1 Protein Homology CDS 171652 172629 . + 0 ID=cds-WP_000742089.1;Parent=gene-AB25_RS22245;Dbxref=GenBank:WP_000742089.1;Name=WP_000742089.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414951.1;locus_tag=AB25_RS22245;product=thiamine-phosphate kinase;protein_id=WP_000742089.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 172607 173125 . + . ID=gene-AB25_RS22240;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=AB25_RS22240;old_locus_tag=AB25_0475 NZ_JJMC01000006.1 Protein Homology CDS 172607 173125 . + 0 ID=cds-WP_000154044.1;Parent=gene-AB25_RS22240;Dbxref=GenBank:WP_000154044.1;Name=WP_000154044.1;Ontology_term=GO:0006629,GO:0008962;gbkey=CDS;gene=pgpA;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414952.1;locus_tag=AB25_RS22240;product=phosphatidylglycerophosphatase A;protein_id=WP_000154044.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 173179 174153 . - . ID=gene-AB25_RS22235;Name=yajO;gbkey=Gene;gene=yajO;gene_biotype=protein_coding;locus_tag=AB25_RS22235;old_locus_tag=AB25_0476 NZ_JJMC01000006.1 Protein Homology CDS 173179 174153 . - 0 ID=cds-WP_001199783.1;Parent=gene-AB25_RS22235;Dbxref=GenBank:WP_001199783.1;Name=WP_001199783.1;gbkey=CDS;gene=yajO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414953.2;locus_tag=AB25_RS22235;product=1-deoxyxylulose-5-phosphate synthase YajO;protein_id=WP_001199783.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 174333 176195 . - . ID=gene-AB25_RS22230;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=AB25_RS22230;old_locus_tag=AB25_0477 NZ_JJMC01000006.1 Protein Homology CDS 174333 176195 . - 0 ID=cds-WP_000006815.1;Parent=gene-AB25_RS22230;Dbxref=GenBank:WP_000006815.1;Name=WP_000006815.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308501.1;locus_tag=AB25_RS22230;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_000006815.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 176220 177119 . - . ID=gene-AB25_RS22225;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=AB25_RS22225;old_locus_tag=AB25_0478 NZ_JJMC01000006.1 Protein Homology CDS 176220 177119 . - 0 ID=cds-WP_000347235.1;Parent=gene-AB25_RS22225;Dbxref=GenBank:WP_000347235.1;Name=WP_000347235.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414955.1;locus_tag=AB25_RS22225;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WP_000347235.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 177119 177361 . - . ID=gene-AB25_RS22220;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=AB25_RS22220;old_locus_tag=AB25_0479 NZ_JJMC01000006.1 Protein Homology CDS 177119 177361 . - 0 ID=cds-WP_001124935.1;Parent=gene-AB25_RS22220;Dbxref=GenBank:WP_001124935.1;Name=WP_001124935.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308503.1;locus_tag=AB25_RS22220;product=exodeoxyribonuclease VII small subunit;protein_id=WP_001124935.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 177567 179015 . + . ID=gene-AB25_RS22215;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=AB25_RS22215;old_locus_tag=AB25_0481 NZ_JJMC01000006.1 Protein Homology CDS 177567 179015 . + 0 ID=cds-WP_000668685.1;Parent=gene-AB25_RS22215;Dbxref=GenBank:WP_000668685.1;Name=WP_000668685.1;Ontology_term=GO:0006400,GO:0009228,GO:0140741;gbkey=CDS;gene=thiI;go_function=tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168857.1;locus_tag=AB25_RS22215;product=tRNA uracil 4-sulfurtransferase ThiI;protein_id=WP_000668685.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 179069 179659 . - . ID=gene-AB25_RS22210;Name=yajL;gbkey=Gene;gene=yajL;gene_biotype=protein_coding;locus_tag=AB25_RS22210;old_locus_tag=AB25_0482 NZ_JJMC01000006.1 Protein Homology CDS 179069 179659 . - 0 ID=cds-WP_001276309.1;Parent=gene-AB25_RS22210;Dbxref=GenBank:WP_001276309.1;Name=WP_001276309.1;gbkey=CDS;gene=yajL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308505.2;locus_tag=AB25_RS22210;product=protein deglycase YajL;protein_id=WP_001276309.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 179622 180533 . - . ID=gene-AB25_RS22205;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=AB25_RS22205;old_locus_tag=AB25_0483 NZ_JJMC01000006.1 Protein Homology CDS 179622 180533 . - 0 ID=cds-WP_000705853.1;Parent=gene-AB25_RS22205;Dbxref=GenBank:WP_000705853.1;Name=WP_000705853.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414959.1;locus_tag=AB25_RS22205;product=2-dehydropantoate 2-reductase;protein_id=WP_000705853.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 180701 181192 . + . ID=gene-AB25_RS22200;Name=yajQ;gbkey=Gene;gene=yajQ;gene_biotype=protein_coding;locus_tag=AB25_RS22200;old_locus_tag=AB25_0484 NZ_JJMC01000006.1 Protein Homology CDS 180701 181192 . + 0 ID=cds-WP_001138904.1;Parent=gene-AB25_RS22200;Dbxref=GenBank:WP_001138904.1;Name=WP_001138904.1;gbkey=CDS;gene=yajQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414960.2;locus_tag=AB25_RS22200;product=nucleotide binding protein YajQ;protein_id=WP_001138904.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 181320 182684 . - . ID=gene-AB25_RS22195;Name=yajR;gbkey=Gene;gene=yajR;gene_biotype=protein_coding;locus_tag=AB25_RS22195;old_locus_tag=AB25_0485 NZ_JJMC01000006.1 Protein Homology CDS 181320 182684 . - 0 ID=cds-WP_001000978.1;Parent=gene-AB25_RS22195;Dbxref=GenBank:WP_001000978.1;Name=WP_001000978.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yajR;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308508.2;locus_tag=AB25_RS22195;product=MFS transporter;protein_id=WP_001000978.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 182833 183723 . - . ID=gene-AB25_RS22190;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=AB25_RS22190;old_locus_tag=AB25_0486 NZ_JJMC01000006.1 Protein Homology CDS 182833 183723 . - 0 ID=cds-WP_000971327.1;Parent=gene-AB25_RS22190;Dbxref=GenBank:WP_000971327.1;Name=WP_000971327.1;Ontology_term=GO:0048034,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308509.1;locus_tag=AB25_RS22190;product=heme o synthase;protein_id=WP_000971327.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 183735 184064 . - . ID=gene-AB25_RS22185;Name=cyoD;gbkey=Gene;gene=cyoD;gene_biotype=protein_coding;locus_tag=AB25_RS22185;old_locus_tag=AB25_0487 NZ_JJMC01000006.1 Protein Homology CDS 183735 184064 . - 0 ID=cds-WP_000019869.1;Parent=gene-AB25_RS22185;Dbxref=GenBank:WP_000019869.1;Name=WP_000019869.1;gbkey=CDS;gene=cyoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308510.1;locus_tag=AB25_RS22185;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_000019869.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 184064 184678 . - . ID=gene-AB25_RS22180;Name=cyoC;gbkey=Gene;gene=cyoC;gene_biotype=protein_coding;locus_tag=AB25_RS22180;old_locus_tag=AB25_0488 NZ_JJMC01000006.1 Protein Homology CDS 184064 184678 . - 0 ID=cds-WP_000179819.1;Parent=gene-AB25_RS22180;Dbxref=GenBank:WP_000179819.1;Name=WP_000179819.1;Ontology_term=GO:0022904,GO:0004129;gbkey=CDS;gene=cyoC;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414964.1;locus_tag=AB25_RS22180;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_000179819.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 184668 186659 . - . ID=gene-AB25_RS22175;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=AB25_RS22175;old_locus_tag=AB25_0489 NZ_JJMC01000006.1 Protein Homology CDS 184668 186659 . - 0 ID=cds-WP_000467180.1;Parent=gene-AB25_RS22175;Dbxref=GenBank:WP_000467180.1;Name=WP_000467180.1;Ontology_term=GO:0004129;gbkey=CDS;gene=cyoB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444673.1;locus_tag=AB25_RS22175;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_000467180.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 186681 187628 . - . ID=gene-AB25_RS22170;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=AB25_RS22170;old_locus_tag=AB25_0490 NZ_JJMC01000006.1 Protein Homology CDS 186681 187628 . - 0 ID=cds-WP_001239434.1;Parent=gene-AB25_RS22170;Dbxref=GenBank:WP_001239434.1;Name=WP_001239434.1;Ontology_term=GO:0022900,GO:0004129;gbkey=CDS;gene=cyoA;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414966.1;locus_tag=AB25_RS22170;product=cytochrome o ubiquinol oxidase subunit II;protein_id=WP_001239434.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 188088 189563 . - . ID=gene-AB25_RS22165;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=AB25_RS22165;old_locus_tag=AB25_0491 NZ_JJMC01000006.1 Protein Homology CDS 188088 189563 . - 0 ID=cds-WP_000098438.1;Parent=gene-AB25_RS22165;Dbxref=GenBank:WP_000098438.1;Name=WP_000098438.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ampG;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706326.1;locus_tag=AB25_RS22165;product=muropeptide MFS transporter AmpG;protein_id=WP_000098438.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 189607 190185 . - . ID=gene-AB25_RS22160;Name=yajG;gbkey=Gene;gene=yajG;gene_biotype=protein_coding;locus_tag=AB25_RS22160;old_locus_tag=AB25_0492 NZ_JJMC01000006.1 Protein Homology CDS 189607 190185 . - 0 ID=cds-WP_001295326.1;Parent=gene-AB25_RS22160;Dbxref=GenBank:WP_001295326.1;Name=WP_001295326.1;gbkey=CDS;gene=yajG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414968.4;locus_tag=AB25_RS22160;product=lipoprotein;protein_id=WP_001295326.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 190490 190807 . + . ID=gene-AB25_RS22155;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=AB25_RS22155;old_locus_tag=AB25_0494 NZ_JJMC01000006.1 Protein Homology CDS 190490 190807 . + 0 ID=cds-WP_000973448.1;Parent=gene-AB25_RS22155;Dbxref=GenBank:WP_000973448.1;Name=WP_000973448.1;gbkey=CDS;gene=bolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414969.4;locus_tag=AB25_RS22155;product=transcriptional regulator BolA;protein_id=WP_000973448.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 191151 192449 . + . ID=gene-AB25_RS22145;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=AB25_RS22145;old_locus_tag=AB25_0496 NZ_JJMC01000006.1 Protein Homology CDS 191151 192449 . + 0 ID=cds-WP_001198386.1;Parent=gene-AB25_RS22145;Dbxref=GenBank:WP_001198386.1;Name=WP_001198386.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001716227.1;locus_tag=AB25_RS22145;product=trigger factor;protein_id=WP_001198386.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 192695 193318 . + . ID=gene-AB25_RS22140;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=AB25_RS22140;old_locus_tag=AB25_0497 NZ_JJMC01000006.1 Protein Homology CDS 192695 193318 . + 0 ID=cds-WP_000122253.1;Parent=gene-AB25_RS22140;Dbxref=GenBank:WP_000122253.1;Name=WP_000122253.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809880.1;locus_tag=AB25_RS22140;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_000122253.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 193444 194718 . + . ID=gene-AB25_RS22135;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=AB25_RS22135;old_locus_tag=AB25_0498 NZ_JJMC01000006.1 Protein Homology CDS 193444 194718 . + 0 ID=cds-WP_000130305.1;Parent=gene-AB25_RS22135;Dbxref=GenBank:WP_000130305.1;Name=WP_000130305.1;Ontology_term=GO:0005524,GO:0051082,GO:0140662,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=AB25_RS22135;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=WP_000130305.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 194906 197260 . + . ID=gene-AB25_RS22130;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=AB25_RS22130;old_locus_tag=AB25_0499 NZ_JJMC01000006.1 Protein Homology CDS 194906 197260 . + 0 ID=cds-WP_001295325.1;Parent=gene-AB25_RS22130;Dbxref=GenBank:WP_001295325.1;Name=WP_001295325.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469947.1;locus_tag=AB25_RS22130;product=endopeptidase La;protein_id=WP_001295325.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 197451 197741 . + . ID=gene-AB25_RS22125;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=AB25_RS22125;old_locus_tag=AB25_0500 NZ_JJMC01000006.1 Protein Homology CDS 197451 197741 . + 0 ID=cds-WP_254892905.1;Parent=gene-AB25_RS22125;Dbxref=GenBank:WP_254892905.1;Name=WP_254892905.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013356995.1;locus_tag=AB25_RS22125;product=nucleoid-associated protein HU-beta;protein_id=WP_254892905.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 197933 199804 . + . ID=gene-AB25_RS22120;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=AB25_RS22120;old_locus_tag=AB25_0501 NZ_JJMC01000006.1 Protein Homology CDS 197933 199804 . + 0 ID=cds-WP_000969380.1;Parent=gene-AB25_RS22120;Dbxref=GenBank:WP_000969380.1;Name=WP_000969380.1;Ontology_term=GO:0003755;gbkey=CDS;gene=ppiD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414975.1;locus_tag=AB25_RS22120;product=peptidylprolyl isomerase;protein_id=WP_000969380.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 199955 200326 . + . ID=gene-AB25_RS22115;Name=ybaV;gbkey=Gene;gene=ybaV;gene_biotype=protein_coding;locus_tag=AB25_RS22115;old_locus_tag=AB25_0502 NZ_JJMC01000006.1 Protein Homology CDS 199955 200326 . + 0 ID=cds-WP_000680294.1;Parent=gene-AB25_RS22115;Dbxref=GenBank:WP_000680294.1;Name=WP_000680294.1;gbkey=CDS;gene=ybaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414976.1;locus_tag=AB25_RS22115;product=helix-hairpin-helix domain-containing protein;protein_id=WP_000680294.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 200420 200818 . + . ID=gene-AB25_RS22110;Name=fadM;gbkey=Gene;gene=fadM;gene_biotype=protein_coding;locus_tag=AB25_RS22110;old_locus_tag=AB25_0503 NZ_JJMC01000006.1 Protein Homology CDS 200420 200818 . + 0 ID=cds-WP_001194534.1;Parent=gene-AB25_RS22110;Dbxref=GenBank:WP_001194534.1;Name=WP_001194534.1;gbkey=CDS;gene=fadM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414977.1;locus_tag=AB25_RS22110;product=long-chain acyl-CoA thioesterase FadM;protein_id=WP_001194534.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 200870 201565 . - . ID=gene-AB25_RS22105;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=AB25_RS22105;old_locus_tag=AB25_0504 NZ_JJMC01000006.1 Protein Homology CDS 200870 201565 . - 0 ID=cds-WP_000817229.1;Parent=gene-AB25_RS22105;Dbxref=GenBank:WP_000817229.1;Name=WP_000817229.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706338.1;locus_tag=AB25_RS22105;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_000817229.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 201630 203330 . - . ID=gene-AB25_RS22100;Name=ybaE;gbkey=Gene;gene=ybaE;gene_biotype=protein_coding;locus_tag=AB25_RS22100;old_locus_tag=AB25_0505 NZ_JJMC01000006.1 Protein Homology CDS 201630 203330 . - 0 ID=cds-WP_001238232.1;Parent=gene-AB25_RS22100;Dbxref=GenBank:WP_001238232.1;Name=WP_001238232.1;gbkey=CDS;gene=ybaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308526.1;locus_tag=AB25_RS22100;product=SgrR family transcriptional regulator;protein_id=WP_001238232.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 203430 204248 . + . ID=gene-AB25_RS22095;Name=cof;gbkey=Gene;gene=cof;gene_biotype=protein_coding;locus_tag=AB25_RS22095;old_locus_tag=AB25_0506 NZ_JJMC01000006.1 Protein Homology CDS 203430 204248 . + 0 ID=cds-WP_000113027.1;Parent=gene-AB25_RS22095;Dbxref=GenBank:WP_000113027.1;Name=WP_000113027.1;Ontology_term=GO:0016818;gbkey=CDS;gene=cof;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414980.2;locus_tag=AB25_RS22095;product=HMP-PP phosphatase;protein_id=WP_000113027.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 204401 204859 . + . ID=gene-AB25_RS22090;Name=decR;gbkey=Gene;gene=decR;gene_biotype=protein_coding;locus_tag=AB25_RS22090;old_locus_tag=AB25_0507 NZ_JJMC01000006.1 Protein Homology CDS 204401 204859 . + 0 ID=cds-WP_000884589.1;Parent=gene-AB25_RS22090;Dbxref=GenBank:WP_000884589.1;Name=WP_000884589.1;gbkey=CDS;gene=decR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308528.2;locus_tag=AB25_RS22090;product=DNA-binding transcriptional regulator DecR;protein_id=WP_000884589.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 204889 206661 . + . ID=gene-AB25_RS22085;Name=mdlA;gbkey=Gene;gene=mdlA;gene_biotype=protein_coding;locus_tag=AB25_RS22085;old_locus_tag=AB25_0508 NZ_JJMC01000006.1 Protein Homology CDS 204889 206661 . + 0 ID=cds-WP_001235609.1;Parent=gene-AB25_RS22085;Dbxref=GenBank:WP_001235609.1;Name=WP_001235609.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=mdlA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706342.1;locus_tag=AB25_RS22085;product=SmdA family multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_001235609.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 206654 208435 . + . ID=gene-AB25_RS22080;Name=mdlB;gbkey=Gene;gene=mdlB;gene_biotype=protein_coding;locus_tag=AB25_RS22080;old_locus_tag=AB25_0509 NZ_JJMC01000006.1 Protein Homology CDS 206654 208435 . + 0 ID=cds-WP_001256174.1;Parent=gene-AB25_RS22080;Dbxref=GenBank:WP_001256174.1;Name=WP_001256174.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=mdlB;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308530.1;locus_tag=AB25_RS22080;product=SmdB family multidrug efflux ABC transporter permease/ATP-binding protein;protein_id=WP_001256174.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 208616 208954 . + . ID=gene-AB25_RS22075;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=AB25_RS22075;old_locus_tag=AB25_0511 NZ_JJMC01000006.1 Protein Homology CDS 208616 208954 . + 0 ID=cds-WP_000780338.1;Parent=gene-AB25_RS22075;Dbxref=GenBank:WP_000780338.1;Name=WP_000780338.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;gene=glnK;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308531.1;locus_tag=AB25_RS22075;product=P-II family nitrogen regulator;protein_id=WP_000780338.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 208984 210270 . + . ID=gene-AB25_RS22070;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;locus_tag=AB25_RS22070;old_locus_tag=AB25_0512 NZ_JJMC01000006.1 Protein Homology CDS 208984 210270 . + 0 ID=cds-WP_000685029.1;Parent=gene-AB25_RS22070;Dbxref=GenBank:WP_000685029.1;Name=WP_000685029.1;Ontology_term=GO:0072488,GO:0008519,GO:0005886;gbkey=CDS;gene=amtB;go_component=plasma membrane|0005886||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308532.1;locus_tag=AB25_RS22070;product=ammonium transporter AmtB;protein_id=WP_000685029.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 210319 211179 . - . ID=gene-AB25_RS22065;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=AB25_RS22065;old_locus_tag=AB25_0513 NZ_JJMC01000006.1 Protein Homology CDS 210319 211179 . - 0 ID=cds-WP_000075876.1;Parent=gene-AB25_RS22065;Dbxref=GenBank:WP_000075876.1;Name=WP_000075876.1;gbkey=CDS;gene=tesB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308533.1;locus_tag=AB25_RS22065;product=acyl-CoA thioesterase II;protein_id=WP_000075876.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 211397 211969 . + . ID=gene-AB25_RS22060;Name=ybaY;gbkey=Gene;gene=ybaY;gene_biotype=protein_coding;locus_tag=AB25_RS22060;old_locus_tag=AB25_0515 NZ_JJMC01000006.1 Protein Homology CDS 211397 211969 . + 0 ID=cds-WP_000779831.1;Parent=gene-AB25_RS22060;Dbxref=GenBank:WP_000779831.1;Name=WP_000779831.1;gbkey=CDS;gene=ybaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706347.1;locus_tag=AB25_RS22060;product=YbaY family lipoprotein;protein_id=WP_000779831.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 212000 212311 . - . ID=gene-AB25_RS22055;Name=AB25_RS22055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS22055;old_locus_tag=AB25_0516 NZ_JJMC01000006.1 Protein Homology CDS 212000 212311 . - 0 ID=cds-WP_000409911.1;Parent=gene-AB25_RS22055;Dbxref=GenBank:WP_000409911.1;Name=WP_000409911.1;Ontology_term=GO:0006281,GO:0003677,GO:0003824,GO:0003908;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706349.2;locus_tag=AB25_RS22055;product=MGMT family protein;protein_id=WP_000409911.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 212474 212570 . + . ID=gene-AB25_RS27290;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=AB25_RS27290 NZ_JJMC01000006.1 cmsearch SRP_RNA 212474 212570 . + . ID=rna-AB25_RS27290;Parent=gene-AB25_RS27290;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS27290;product=signal recognition particle sRNA small type NZ_JJMC01000006.1 cmsearch exon 212474 212570 . + . ID=exon-AB25_RS27290-1;Parent=rna-AB25_RS27290;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS27290;product=signal recognition particle sRNA small type NZ_JJMC01000006.1 RefSeq gene 212690 213043 . + . ID=gene-AB25_RS22050;Name=ybaA;gbkey=Gene;gene=ybaA;gene_biotype=protein_coding;locus_tag=AB25_RS22050;old_locus_tag=AB25_0517 NZ_JJMC01000006.1 Protein Homology CDS 212690 213043 . + 0 ID=cds-WP_000878140.1;Parent=gene-AB25_RS22050;Dbxref=GenBank:WP_000878140.1;Name=WP_000878140.1;gbkey=CDS;gene=ybaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308536.1;locus_tag=AB25_RS22050;product=DUF1428 domain-containing protein;protein_id=WP_000878140.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 213085 214635 . - . ID=gene-AB25_RS22045;Name=pdeB;gbkey=Gene;gene=pdeB;gene_biotype=protein_coding;locus_tag=AB25_RS22045;old_locus_tag=AB25_0518 NZ_JJMC01000006.1 Protein Homology CDS 213085 214635 . - 0 ID=cds-WP_001299455.1;Parent=gene-AB25_RS22045;Dbxref=GenBank:WP_001299455.1;Name=WP_001299455.1;gbkey=CDS;gene=pdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308537.2;locus_tag=AB25_RS22045;product=cyclic-guanylate-specific phosphodiesterase PdeB;protein_id=WP_001299455.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 214799 215269 . - . ID=gene-AB25_RS22040;Name=ylaC;gbkey=Gene;gene=ylaC;gene_biotype=protein_coding;locus_tag=AB25_RS22040;old_locus_tag=AB25_0519 NZ_JJMC01000006.1 Protein Homology CDS 214799 215269 . - 0 ID=cds-WP_000136192.1;Parent=gene-AB25_RS22040;Dbxref=GenBank:WP_000136192.1;Name=WP_000136192.1;gbkey=CDS;gene=ylaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308538.2;locus_tag=AB25_RS22040;product=YlaC family protein;protein_id=WP_000136192.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 215385 215936 . - . ID=gene-AB25_RS22035;Name=maa;gbkey=Gene;gene=maa;gene_biotype=protein_coding;locus_tag=AB25_RS22035;old_locus_tag=AB25_0520 NZ_JJMC01000006.1 Protein Homology CDS 215385 215936 . - 0 ID=cds-WP_000102568.1;Parent=gene-AB25_RS22035;Dbxref=GenBank:WP_000102568.1;Name=WP_000102568.1;Ontology_term=GO:0016407;gbkey=CDS;gene=maa;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414992.1;locus_tag=AB25_RS22035;product=maltose O-acetyltransferase;protein_id=WP_000102568.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 216108 216326 . - . ID=gene-AB25_RS22030;Name=hha;gbkey=Gene;gene=hha;gene_biotype=protein_coding;locus_tag=AB25_RS22030;old_locus_tag=AB25_0521 NZ_JJMC01000006.1 Protein Homology CDS 216108 216326 . - 0 ID=cds-WP_001291435.1;Parent=gene-AB25_RS22030;Dbxref=GenBank:WP_001291435.1;Name=WP_001291435.1;gbkey=CDS;gene=hha;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308540.1;locus_tag=AB25_RS22030;product=HHA domain-containing protein;protein_id=WP_001291435.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 216352 216726 . - . ID=gene-AB25_RS22025;Name=tomB;gbkey=Gene;gene=tomB;gene_biotype=protein_coding;locus_tag=AB25_RS22025;old_locus_tag=AB25_0522 NZ_JJMC01000006.1 Protein Homology CDS 216352 216726 . - 0 ID=cds-WP_032170596.1;Parent=gene-AB25_RS22025;Dbxref=GenBank:WP_032170596.1;Name=WP_032170596.1;gbkey=CDS;gene=tomB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741190.1;locus_tag=AB25_RS22025;product=Hha toxicity modulator TomB;protein_id=WP_032170596.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 217272 220421 . - . ID=gene-AB25_RS22020;Name=acrB;gbkey=Gene;gene=acrB;gene_biotype=protein_coding;locus_tag=AB25_RS22020;old_locus_tag=AB25_0523 NZ_JJMC01000006.1 Protein Homology CDS 217272 220421 . - 0 ID=cds-WP_001132469.1;Parent=gene-AB25_RS22020;Dbxref=GenBank:WP_001132469.1;Name=WP_001132469.1;gbkey=CDS;gene=acrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414995.1;locus_tag=AB25_RS22020;product=efflux RND transporter permease AcrB;protein_id=WP_001132469.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 220444 221637 . - . ID=gene-AB25_RS22015;Name=acrA;gbkey=Gene;gene=acrA;gene_biotype=protein_coding;locus_tag=AB25_RS22015;old_locus_tag=AB25_0524 NZ_JJMC01000006.1 Protein Homology CDS 220444 221637 . - 0 ID=cds-WP_001295324.1;Parent=gene-AB25_RS22015;Dbxref=GenBank:WP_001295324.1;Name=WP_001295324.1;gbkey=CDS;gene=acrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308543.1;locus_tag=AB25_RS22015;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrA;protein_id=WP_001295324.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 221779 222426 . + . ID=gene-AB25_RS22010;Name=acrR;gbkey=Gene;gene=acrR;gene_biotype=protein_coding;locus_tag=AB25_RS22010;old_locus_tag=AB25_0525 NZ_JJMC01000006.1 Protein Homology CDS 221779 222426 . + 0 ID=cds-WP_000101737.1;Parent=gene-AB25_RS22010;Dbxref=GenBank:WP_000101737.1;Name=WP_000101737.1;gbkey=CDS;gene=acrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414997.1;locus_tag=AB25_RS22010;product=multidrug efflux transporter transcriptional repressor AcrR;protein_id=WP_000101737.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 222554 225916 . + . ID=gene-AB25_RS22005;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=protein_coding;locus_tag=AB25_RS22005;old_locus_tag=AB25_0526 NZ_JJMC01000006.1 Protein Homology CDS 222554 225916 . + 0 ID=cds-WP_000177726.1;Parent=gene-AB25_RS22005;Dbxref=GenBank:WP_000177726.1;Name=WP_000177726.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscK;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706358.1;locus_tag=AB25_RS22005;product=mechanosensitive channel MscK;protein_id=WP_000177726.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 226128 226289 . - . ID=gene-AB25_RS22000;Name=rsmS;gbkey=Gene;gene=rsmS;gene_biotype=protein_coding;locus_tag=AB25_RS22000;old_locus_tag=AB25_0527 NZ_JJMC01000006.1 Protein Homology CDS 226128 226289 . - 0 ID=cds-WP_000051146.1;Parent=gene-AB25_RS22000;Dbxref=GenBank:WP_000051146.1;Name=WP_000051146.1;gbkey=CDS;gene=rsmS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414999.1;locus_tag=AB25_RS22000;product=pleiotropic regulatory protein RsmS;protein_id=WP_000051146.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 226303 226830 . - . ID=gene-AB25_RS21995;Name=priC;gbkey=Gene;gene=priC;gene_biotype=protein_coding;locus_tag=AB25_RS21995;old_locus_tag=AB25_0528 NZ_JJMC01000006.1 Protein Homology CDS 226303 226830 . - 0 ID=cds-WP_000844848.1;Parent=gene-AB25_RS21995;Dbxref=GenBank:WP_000844848.1;Name=WP_000844848.1;gbkey=CDS;gene=priC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415000.1;locus_tag=AB25_RS21995;product=primosomal replication protein N'';protein_id=WP_000844848.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 226900 227277 . + . ID=gene-AB25_RS21990;Name=ybaN;gbkey=Gene;gene=ybaN;gene_biotype=protein_coding;locus_tag=AB25_RS21990;old_locus_tag=AB25_0529 NZ_JJMC01000006.1 Protein Homology CDS 226900 227277 . + 0 ID=cds-WP_001188905.1;Parent=gene-AB25_RS21990;Dbxref=GenBank:WP_001188905.1;Name=WP_001188905.1;gbkey=CDS;gene=ybaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308548.1;locus_tag=AB25_RS21990;product=DUF454 family protein;protein_id=WP_001188905.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 227430 227981 . + . ID=gene-AB25_RS21985;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=AB25_RS21985;old_locus_tag=AB25_0530 NZ_JJMC01000006.1 Protein Homology CDS 227430 227981 . + 0 ID=cds-WP_000127356.1;Parent=gene-AB25_RS21985;Dbxref=GenBank:WP_000127356.1;Name=WP_000127356.1;Ontology_term=GO:0006168,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125198.1;locus_tag=AB25_RS21985;product=adenine phosphoribosyltransferase;protein_id=WP_000127356.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 228110 230041 . + . ID=gene-AB25_RS21980;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=AB25_RS21980;old_locus_tag=AB25_0531 NZ_JJMC01000006.1 Protein Homology CDS 228110 230041 . + 0 ID=cds-WP_000122008.1;Parent=gene-AB25_RS21980;Dbxref=GenBank:WP_000122008.1;Name=WP_000122008.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308550.1;locus_tag=AB25_RS21980;product=DNA polymerase III subunit gamma/tau;protein_id=WP_000122008.1;transl_table=11 NZ_JJMC01000006.1 cmsearch sequence_feature 229374 229438 . + . ID=id-AB25_RS21980;Dbxref=RFAM:RF00382;Note=DnaX frameshifting element;gbkey=misc_feature;gene=dnaX;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS21980 NZ_JJMC01000006.1 RefSeq gene 230094 230423 . + . ID=gene-AB25_RS21975;Name=ybaB;gbkey=Gene;gene=ybaB;gene_biotype=protein_coding;locus_tag=AB25_RS21975;old_locus_tag=AB25_0532 NZ_JJMC01000006.1 Protein Homology CDS 230094 230423 . + 0 ID=cds-WP_000467098.1;Parent=gene-AB25_RS21975;Dbxref=GenBank:WP_000467098.1;Name=WP_000467098.1;Ontology_term=GO:0003677;gbkey=CDS;gene=ybaB;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=AB25_RS21975;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_000467098.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 230423 231028 . + . ID=gene-AB25_RS21970;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=AB25_RS21970;old_locus_tag=AB25_0533 NZ_JJMC01000006.1 Protein Homology CDS 230423 231028 . + 0 ID=cds-WP_001195025.1;Parent=gene-AB25_RS21970;Dbxref=GenBank:WP_001195025.1;Name=WP_001195025.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308552.1;locus_tag=AB25_RS21970;product=recombination mediator RecR;protein_id=WP_001195025.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 231138 233012 . + . ID=gene-AB25_RS21965;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=AB25_RS21965;old_locus_tag=AB25_0534 NZ_JJMC01000006.1 Protein Homology CDS 231138 233012 . + 0 ID=cds-WP_000678213.1;Parent=gene-AB25_RS21965;Dbxref=GenBank:WP_000678213.1;Name=WP_000678213.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003903109.1;locus_tag=AB25_RS21965;product=molecular chaperone HtpG;protein_id=WP_000678213.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 233193 233837 . + . ID=gene-AB25_RS21960;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=AB25_RS21960;old_locus_tag=AB25_0535 NZ_JJMC01000006.1 Protein Homology CDS 233193 233837 . + 0 ID=cds-WP_001220233.1;Parent=gene-AB25_RS21960;Dbxref=GenBank:WP_001220233.1;Name=WP_001220233.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=adenylate kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706188.1;locus_tag=AB25_RS21960;product=adenylate kinase;protein_id=WP_001220233.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 234073 235035 . + . ID=gene-AB25_RS21955;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=AB25_RS21955;old_locus_tag=AB25_0536 NZ_JJMC01000006.1 Protein Homology CDS 234073 235035 . + 0 ID=cds-WP_001250088.1;Parent=gene-AB25_RS21955;Dbxref=GenBank:WP_001250088.1;Name=WP_001250088.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308555.1;locus_tag=AB25_RS21955;product=ferrochelatase;protein_id=WP_001250088.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 235032 235991 . - . ID=gene-AB25_RS21950;Name=aes;gbkey=Gene;gene=aes;gene_biotype=protein_coding;locus_tag=AB25_RS21950;old_locus_tag=AB25_0537 NZ_JJMC01000006.1 Protein Homology CDS 235032 235991 . - 0 ID=cds-WP_000801846.1;Parent=gene-AB25_RS21950;Dbxref=GenBank:WP_000801846.1;Name=WP_000801846.1;Ontology_term=GO:0016787;gbkey=CDS;gene=aes;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415009.1;locus_tag=AB25_RS21950;product=acetyl esterase;protein_id=WP_000801846.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 236143 237447 . + . ID=gene-AB25_RS21945;Name=gsk;gbkey=Gene;gene=gsk;gene_biotype=protein_coding;locus_tag=AB25_RS21945;old_locus_tag=AB25_0538 NZ_JJMC01000006.1 Protein Homology CDS 236143 237447 . + 0 ID=cds-WP_000671574.1;Parent=gene-AB25_RS21945;Dbxref=GenBank:WP_000671574.1;Name=WP_000671574.1;gbkey=CDS;gene=gsk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308557.1;locus_tag=AB25_RS21945;product=inosine/guanosine kinase;protein_id=WP_000671574.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 237580 239256 . - . ID=gene-AB25_RS21940;Name=ybaL;gbkey=Gene;gene=ybaL;gene_biotype=protein_coding;locus_tag=AB25_RS21940;old_locus_tag=AB25_0539 NZ_JJMC01000006.1 Protein Homology CDS 237580 239256 . - 0 ID=cds-WP_000546228.1;Parent=gene-AB25_RS21940;Dbxref=GenBank:WP_000546228.1;Name=WP_000546228.1;Ontology_term=GO:0006813,GO:0008324,GO:0051139,GO:0016020;gbkey=CDS;gene=ybaL;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308558.1;locus_tag=AB25_RS21940;product=YbaL family putative K(+) efflux transporter;protein_id=WP_000546228.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 239494 240714 . - . ID=gene-AB25_RS21935;Name=fsr;gbkey=Gene;gene=fsr;gene_biotype=protein_coding;locus_tag=AB25_RS21935;old_locus_tag=AB25_0540 NZ_JJMC01000006.1 Protein Homology CDS 239494 240714 . - 0 ID=cds-WP_032173371.1;Parent=gene-AB25_RS21935;Dbxref=GenBank:WP_032173371.1;Name=WP_032173371.1;gbkey=CDS;gene=fsr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415012.1;locus_tag=AB25_RS21935;product=fosmidomycin MFS transporter;protein_id=WP_032173371.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 240932 242584 . + . ID=gene-AB25_RS21930;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=AB25_RS21930;old_locus_tag=AB25_0541 NZ_JJMC01000006.1 Protein Homology CDS 240932 242584 . + 0 ID=cds-WP_032170599.1;Parent=gene-AB25_RS21930;Dbxref=GenBank:WP_032170599.1;Name=WP_032170599.1;gbkey=CDS;gene=ushA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415013.1;locus_tag=AB25_RS21930;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase;protein_id=WP_032170599.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 242621 243100 . - . ID=gene-AB25_RS21925;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=AB25_RS21925;old_locus_tag=AB25_0542 NZ_JJMC01000006.1 Protein Homology CDS 242621 243100 . - 0 ID=cds-WP_000186631.1;Parent=gene-AB25_RS21925;Dbxref=GenBank:WP_000186631.1;Name=WP_000186631.1;Ontology_term=GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA deacylase activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818871.1;locus_tag=AB25_RS21925;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;protein_id=WP_000186631.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 243304 244098 . - . ID=gene-AB25_RS21920;Name=ybaP;gbkey=Gene;gene=ybaP;gene_biotype=protein_coding;locus_tag=AB25_RS21920;old_locus_tag=AB25_0543 NZ_JJMC01000006.1 Protein Homology CDS 243304 244098 . - 0 ID=cds-WP_000365183.1;Parent=gene-AB25_RS21920;Dbxref=GenBank:WP_000365183.1;Name=WP_000365183.1;Ontology_term=GO:0008233;gbkey=CDS;gene=ybaP;go_function=peptidase activity|0008233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415015.1;locus_tag=AB25_RS21920;product=TraB/GumN family protein;protein_id=WP_000365183.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 244236 244577 . + . ID=gene-AB25_RS21915;Name=ybaQ;gbkey=Gene;gene=ybaQ;gene_biotype=protein_coding;locus_tag=AB25_RS21915;old_locus_tag=AB25_0544 NZ_JJMC01000006.1 Protein Homology CDS 244236 244577 . + 0 ID=cds-WP_001361120.1;Parent=gene-AB25_RS21915;Dbxref=GenBank:WP_001361120.1;Name=WP_001361120.1;Ontology_term=GO:0003677;gbkey=CDS;gene=ybaQ;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415016.4;locus_tag=AB25_RS21915;product=HigA family addiction module antitoxin;protein_id=WP_001361120.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 244691 247195 . - . ID=gene-AB25_RS21910;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=AB25_RS21910;old_locus_tag=AB25_0545 NZ_JJMC01000006.1 Protein Homology CDS 244691 247195 . - 0 ID=cds-WP_000078271.1;Parent=gene-AB25_RS21910;Dbxref=GenBank:WP_000078271.1;Name=WP_000078271.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;gene=copA;go_function=ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415017.1;locus_tag=AB25_RS21910;product=copper-exporting P-type ATPase CopA;protein_id=WP_000078271.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 247457 248389 . + . ID=gene-AB25_RS21905;Name=glsA;gbkey=Gene;gene=glsA;gene_biotype=protein_coding;locus_tag=AB25_RS21905;old_locus_tag=AB25_0546 NZ_JJMC01000006.1 Protein Homology CDS 247457 248389 . + 0 ID=cds-WP_000883016.1;Parent=gene-AB25_RS21905;Dbxref=GenBank:WP_000883016.1;Name=WP_000883016.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsA;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415018.1;locus_tag=AB25_RS21905;product=glutaminase A;protein_id=WP_000883016.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 248392 249684 . + . ID=gene-AB25_RS21900;Name=ybaT;gbkey=Gene;gene=ybaT;gene_biotype=protein_coding;locus_tag=AB25_RS21900;old_locus_tag=AB25_0547 NZ_JJMC01000006.1 Protein Homology CDS 248392 249684 . + 0 ID=cds-WP_000982172.1;Parent=gene-AB25_RS21900;Dbxref=GenBank:WP_000982172.1;Name=WP_000982172.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;gene=ybaT;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415019.1;locus_tag=AB25_RS21900;product=APC family permease;protein_id=WP_000982172.1;transl_table=11 NZ_JJMC01000006.1 RefSeq pseudogene 249715 249812 . + . ID=gene-AB25_RS32370;Name=AB25_RS32370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32370;partial=true;pseudo=true;start_range=.,249715 NZ_JJMC01000006.1 Protein Homology CDS 249715 249812 . + 0 ID=cds-AB25_RS32370;Parent=gene-AB25_RS32370;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308571.1;locus_tag=AB25_RS32370;partial=true;product=hypothetical protein;pseudo=true;start_range=.,249715;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 249809 250216 . + . ID=gene-AB25_RS21895;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=AB25_RS21895;old_locus_tag=AB25_0548 NZ_JJMC01000006.1 Protein Homology CDS 249809 250216 . + 0 ID=cds-WP_001026747.1;Parent=gene-AB25_RS21895;Dbxref=GenBank:WP_001026747.1;Name=WP_001026747.1;gbkey=CDS;gene=cueR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415020.1;locus_tag=AB25_RS21895;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_001026747.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 250217 250675 . - . ID=gene-AB25_RS21890;Name=ybbJ;gbkey=Gene;gene=ybbJ;gene_biotype=protein_coding;locus_tag=AB25_RS21890;old_locus_tag=AB25_0549 NZ_JJMC01000006.1 Protein Homology CDS 250217 250675 . - 0 ID=cds-WP_000970323.1;Parent=gene-AB25_RS21890;Dbxref=GenBank:WP_000970323.1;Name=WP_000970323.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ybbJ;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415021.2;locus_tag=AB25_RS21890;product=NfeD family protein;protein_id=WP_000970323.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 250672 251589 . - . ID=gene-AB25_RS21885;Name=qmcA;gbkey=Gene;gene=qmcA;gene_biotype=protein_coding;locus_tag=AB25_RS21885;old_locus_tag=AB25_0550 NZ_JJMC01000006.1 Protein Homology CDS 250672 251589 . - 0 ID=cds-WP_000904502.1;Parent=gene-AB25_RS21885;Dbxref=GenBank:WP_000904502.1;Name=WP_000904502.1;Ontology_term=GO:0016020;gbkey=CDS;gene=qmcA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308579.1;locus_tag=AB25_RS21885;product=SPFH domain-containing protein;protein_id=WP_000904502.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 251735 252412 . + . ID=gene-AB25_RS21880;Name=fetA;gbkey=Gene;gene=fetA;gene_biotype=protein_coding;gene_synonym=ybbL;locus_tag=AB25_RS21880;old_locus_tag=AB25_0551 NZ_JJMC01000006.1 Protein Homology CDS 251735 252412 . + 0 ID=cds-WP_001157550.1;Parent=gene-AB25_RS21880;Dbxref=GenBank:WP_001157550.1;Name=WP_001157550.1;Ontology_term=GO:1903988,GO:0016887;gbkey=CDS;gene=fetA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308580.1;locus_tag=AB25_RS21880;product=iron efflux ABC transporter ATP-binding subunit FetA;protein_id=WP_001157550.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 252399 253178 . + . ID=gene-AB25_RS21875;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=AB25_RS21875;old_locus_tag=AB25_0552 NZ_JJMC01000006.1 Protein Homology CDS 252399 253178 . + 0 ID=cds-WP_001323739.1;Parent=gene-AB25_RS21875;Dbxref=GenBank:WP_001323739.1;Name=WP_001323739.1;Ontology_term=GO:1903988,GO:0005886;gbkey=CDS;gene=fetB;go_component=plasma membrane|0005886||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308581.2;locus_tag=AB25_RS21875;product=iron efflux ABC transporter permease subunit FetB;protein_id=WP_001323739.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 253241 254095 . - . ID=gene-AB25_RS21870;Name=cnoX;gbkey=Gene;gene=cnoX;gene_biotype=protein_coding;locus_tag=AB25_RS21870;old_locus_tag=AB25_0553 NZ_JJMC01000006.1 Protein Homology CDS 253241 254095 . - 0 ID=cds-WP_001295322.1;Parent=gene-AB25_RS21870;Dbxref=GenBank:WP_001295322.1;Name=WP_001295322.1;gbkey=CDS;gene=cnoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308582.2;locus_tag=AB25_RS21870;product=chaperedoxin;protein_id=WP_001295322.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 254156 254965 . - . ID=gene-AB25_RS21865;Name=ybbO;gbkey=Gene;gene=ybbO;gene_biotype=protein_coding;locus_tag=AB25_RS21865;old_locus_tag=AB25_0554 NZ_JJMC01000006.1 Protein Homology CDS 254156 254965 . - 0 ID=cds-WP_000148959.1;Parent=gene-AB25_RS21865;Dbxref=GenBank:WP_000148959.1;Name=WP_000148959.1;gbkey=CDS;gene=ybbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415026.1;locus_tag=AB25_RS21865;product=NADP(+)-dependent aldehyde reductase;protein_id=WP_000148959.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 254955 255578 . - . ID=gene-AB25_RS21860;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=AB25_RS21860;old_locus_tag=AB25_0555 NZ_JJMC01000006.1 Protein Homology CDS 254955 255578 . - 0 ID=cds-WP_001295836.1;Parent=gene-AB25_RS21860;Dbxref=GenBank:WP_001295836.1;Name=WP_001295836.1;Ontology_term=GO:0006629,GO:0016298;gbkey=CDS;gene=tesA;go_function=lipase activity|0016298||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225520.1;locus_tag=AB25_RS21860;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=WP_001295836.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 255549 256235 . + . ID=gene-AB25_RS21855;Name=ybbA;gbkey=Gene;gene=ybbA;gene_biotype=protein_coding;locus_tag=AB25_RS21855;old_locus_tag=AB25_0556 NZ_JJMC01000006.1 Protein Homology CDS 255549 256235 . + 0 ID=cds-WP_001110573.1;Parent=gene-AB25_RS21855;Dbxref=GenBank:WP_001110573.1;Name=WP_001110573.1;gbkey=CDS;gene=ybbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415028.1;locus_tag=AB25_RS21855;product=putative ABC transporter ATP-binding protein YbbA;protein_id=WP_001110573.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 256232 258646 . + . ID=gene-AB25_RS21850;Name=ybbP;gbkey=Gene;gene=ybbP;gene_biotype=protein_coding;locus_tag=AB25_RS21850;old_locus_tag=AB25_0557 NZ_JJMC01000006.1 Protein Homology CDS 256232 258646 . + 0 ID=cds-WP_000561866.1;Parent=gene-AB25_RS21850;Dbxref=GenBank:WP_000561866.1;Name=WP_000561866.1;gbkey=CDS;gene=ybbP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415029.1;locus_tag=AB25_RS21850;product=putative ABC transporter permease subunit YbbP;protein_id=WP_000561866.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 258864 259019 . - . ID=gene-AB25_RS32905;Name=dinQ;gbkey=Gene;gene=dinQ;gene_biotype=protein_coding;locus_tag=AB25_RS32905;old_locus_tag=AB25_0558 NZ_JJMC01000006.1 Protein Homology CDS 258864 259019 . - 0 ID=cds-WP_001308457.1;Parent=gene-AB25_RS32905;Dbxref=GenBank:WP_001308457.1;Name=WP_001308457.1;gbkey=CDS;gene=dinQ;inference=COORDINATES: protein motif:HMM:NF041472.1;locus_tag=AB25_RS32905;product=damage-inducible type I toxin DinQ;protein_id=WP_001308457.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 259358 260452 . - . ID=gene-AB25_RS21845;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=AB25_RS21845;old_locus_tag=AB25_0559 NZ_JJMC01000006.1 Protein Homology CDS 259358 260452 . - 0 ID=cds-WP_032170600.1;Parent=gene-AB25_RS21845;Dbxref=GenBank:WP_032170600.1;Name=WP_032170600.1;Ontology_term=GO:0002098,GO:0043828;gbkey=CDS;gene=mnmH;go_function=tRNA 2-selenouridine synthase activity|0043828||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308591.1;locus_tag=AB25_RS21845;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=WP_032170600.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 260521 261447 . - . ID=gene-AB25_RS21840;Name=allS;gbkey=Gene;gene=allS;gene_biotype=protein_coding;locus_tag=AB25_RS21840;old_locus_tag=AB25_0560 NZ_JJMC01000006.1 Protein Homology CDS 260521 261447 . - 0 ID=cds-WP_000460145.1;Parent=gene-AB25_RS21840;Dbxref=GenBank:WP_000460145.1;Name=WP_000460145.1;gbkey=CDS;gene=allS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308592.1;locus_tag=AB25_RS21840;product=HTH-type transcriptional activator AllS;protein_id=WP_000460145.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 261677 262159 . + . ID=gene-AB25_RS21835;Name=allA;gbkey=Gene;gene=allA;gene_biotype=protein_coding;locus_tag=AB25_RS21835;old_locus_tag=AB25_0561 NZ_JJMC01000006.1 Protein Homology CDS 261677 262159 . + 0 ID=cds-WP_000776385.1;Parent=gene-AB25_RS21835;Dbxref=GenBank:WP_000776385.1;Name=WP_000776385.1;gbkey=CDS;gene=allA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308593.1;locus_tag=AB25_RS21835;product=ureidoglycolate lyase;protein_id=WP_000776385.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 262237 263052 . + . ID=gene-AB25_RS21830;Name=allR;gbkey=Gene;gene=allR;gene_biotype=protein_coding;locus_tag=AB25_RS21830;old_locus_tag=AB25_0562 NZ_JJMC01000006.1 Protein Homology CDS 262237 263052 . + 0 ID=cds-WP_000141275.1;Parent=gene-AB25_RS21830;Dbxref=GenBank:WP_000141275.1;Name=WP_000141275.1;gbkey=CDS;gene=allR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308594.1;locus_tag=AB25_RS21830;product=HTH-type transcriptional repressor AllR;protein_id=WP_000141275.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 263142 264923 . + . ID=gene-AB25_RS21825;Name=gcl;gbkey=Gene;gene=gcl;gene_biotype=protein_coding;locus_tag=AB25_RS21825;old_locus_tag=AB25_0563 NZ_JJMC01000006.1 Protein Homology CDS 263142 264923 . + 0 ID=cds-WP_001096881.1;Parent=gene-AB25_RS21825;Dbxref=GenBank:WP_001096881.1;Name=WP_001096881.1;Ontology_term=GO:0009436,GO:0009028;gbkey=CDS;gene=gcl;go_function=tartronate-semialdehyde synthase activity|0009028||IEA;go_process=glyoxylate catabolic process|0009436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308595.1;locus_tag=AB25_RS21825;product=glyoxylate carboligase;protein_id=WP_001096881.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 264936 265712 . + . ID=gene-AB25_RS21820;Name=hyi;gbkey=Gene;gene=hyi;gene_biotype=protein_coding;locus_tag=AB25_RS21820;old_locus_tag=AB25_0564 NZ_JJMC01000006.1 Protein Homology CDS 264936 265712 . + 0 ID=cds-WP_032170601.1;Parent=gene-AB25_RS21820;Dbxref=GenBank:WP_032170601.1;Name=WP_032170601.1;gbkey=CDS;gene=hyi;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308596.1;locus_tag=AB25_RS21820;product=hydroxypyruvate isomerase;protein_id=WP_032170601.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 265812 266690 . + . ID=gene-AB25_RS21815;Name=glxR;gbkey=Gene;gene=glxR;gene_biotype=protein_coding;locus_tag=AB25_RS21815;old_locus_tag=AB25_0565 NZ_JJMC01000006.1 Protein Homology CDS 265812 266690 . + 0 ID=cds-WP_000765839.1;Parent=gene-AB25_RS21815;Dbxref=GenBank:WP_000765839.1;Name=WP_000765839.1;Ontology_term=GO:0046487,GO:0008679,GO:0051287;gbkey=CDS;gene=glxR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA,NAD binding|0051287||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415042.1;locus_tag=AB25_RS21815;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_000765839.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 266859 268313 . + . ID=gene-AB25_RS21810;Name=allW;gbkey=Gene;gene=allW;gene_biotype=protein_coding;locus_tag=AB25_RS21810;old_locus_tag=AB25_0566 NZ_JJMC01000006.1 Protein Homology CDS 266859 268313 . + 0 ID=cds-WP_000401133.1;Parent=gene-AB25_RS21810;Dbxref=GenBank:WP_000401133.1;Name=WP_000401133.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=allW;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415044.4;locus_tag=AB25_RS21810;product=allantoin transporter;protein_id=WP_000401133.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 268373 269734 . + . ID=gene-AB25_RS21805;Name=allB;gbkey=Gene;gene=allB;gene_biotype=protein_coding;locus_tag=AB25_RS21805;old_locus_tag=AB25_0567 NZ_JJMC01000006.1 Protein Homology CDS 268373 269734 . + 0 ID=cds-WP_000006887.1;Parent=gene-AB25_RS21805;Dbxref=GenBank:WP_000006887.1;Name=WP_000006887.1;Ontology_term=GO:0000256,GO:0004038;gbkey=CDS;gene=allB;go_function=allantoinase activity|0004038||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415045.1;locus_tag=AB25_RS21805;product=allantoinase AllB;protein_id=WP_000006887.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 269791 271092 . + . ID=gene-AB25_RS21800;Name=ybbY;gbkey=Gene;gene=ybbY;gene_biotype=protein_coding;locus_tag=AB25_RS21800;old_locus_tag=AB25_0568 NZ_JJMC01000006.1 Protein Homology CDS 269791 271092 . + 0 ID=cds-WP_001298987.1;Parent=gene-AB25_RS21800;Dbxref=GenBank:WP_001298987.1;Name=WP_001298987.1;gbkey=CDS;gene=ybbY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308602.2;locus_tag=AB25_RS21800;product=uracil/xanthine transporter;protein_id=WP_001298987.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 271114 272259 . + . ID=gene-AB25_RS21795;Name=glxK;gbkey=Gene;gene=glxK;gene_biotype=protein_coding;locus_tag=AB25_RS21795;old_locus_tag=AB25_0569 NZ_JJMC01000006.1 Protein Homology CDS 271114 272259 . + 0 ID=cds-WP_001299453.1;Parent=gene-AB25_RS21795;Dbxref=GenBank:WP_001299453.1;Name=WP_001299453.1;gbkey=CDS;gene=glxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415047.1;locus_tag=AB25_RS21795;product=glycerate 3-kinase;protein_id=WP_001299453.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 272487 273272 . - . ID=gene-AB25_RS21790;Name=allE;gbkey=Gene;gene=allE;gene_biotype=protein_coding;locus_tag=AB25_RS21790;old_locus_tag=AB25_0570 NZ_JJMC01000006.1 Protein Homology CDS 272487 273272 . - 0 ID=cds-WP_000540949.1;Parent=gene-AB25_RS21790;Dbxref=GenBank:WP_000540949.1;Name=WP_000540949.1;Ontology_term=GO:0010136,GO:0071522;gbkey=CDS;gene=allE;go_function=ureidoglycine aminohydrolase activity|0071522||IEA;go_process=ureide catabolic process|0010136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308604.1;locus_tag=AB25_RS21790;product=(S)-ureidoglycine aminohydrolase;protein_id=WP_000540949.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 273283 274518 . - . ID=gene-AB25_RS21785;Name=allC;gbkey=Gene;gene=allC;gene_biotype=protein_coding;locus_tag=AB25_RS21785;old_locus_tag=AB25_0571 NZ_JJMC01000006.1 Protein Homology CDS 273283 274518 . - 0 ID=cds-WP_001391127.1;Parent=gene-AB25_RS21785;Dbxref=GenBank:WP_001391127.1;Name=WP_001391127.1;Ontology_term=GO:0000256,GO:0009442,GO:0047652;gbkey=CDS;gene=allC;go_function=allantoate deiminase activity|0047652||IEA;go_process=allantoin catabolic process|0000256||IEA,allantoin assimilation pathway|0009442||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415049.1;locus_tag=AB25_RS21785;product=allantoate deiminase;protein_id=WP_001391127.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 274540 275589 . - . ID=gene-AB25_RS21780;Name=allD;gbkey=Gene;gene=allD;gene_biotype=protein_coding;locus_tag=AB25_RS21780;old_locus_tag=AB25_0572 NZ_JJMC01000006.1 Protein Homology CDS 274540 275589 . - 0 ID=cds-WP_000700769.1;Parent=gene-AB25_RS21780;Dbxref=GenBank:WP_000700769.1;Name=WP_000700769.1;Ontology_term=GO:0016491;gbkey=CDS;gene=allD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415050.1;locus_tag=AB25_RS21780;product=ureidoglycolate dehydrogenase;protein_id=WP_000700769.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 275907 277574 . + . ID=gene-AB25_RS21775;Name=fdrA;gbkey=Gene;gene=fdrA;gene_biotype=protein_coding;locus_tag=AB25_RS21775;old_locus_tag=AB25_0573 NZ_JJMC01000006.1 Protein Homology CDS 275907 277574 . + 0 ID=cds-WP_000580861.1;Parent=gene-AB25_RS21775;Dbxref=GenBank:WP_000580861.1;Name=WP_000580861.1;gbkey=CDS;gene=fdrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308607.1;locus_tag=AB25_RS21775;product=acyl-CoA synthetase FdrA;protein_id=WP_000580861.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 277584 278843 . + . ID=gene-AB25_RS21770;Name=ylbE;gbkey=Gene;gene=ylbE;gene_biotype=protein_coding;locus_tag=AB25_RS21770;old_locus_tag=AB25_0574 NZ_JJMC01000006.1 Protein Homology CDS 277584 278843 . + 0 ID=cds-WP_000495365.1;Parent=gene-AB25_RS21770;Dbxref=GenBank:WP_000495365.1;Name=WP_000495365.1;gbkey=CDS;gene=ylbE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009029994.1;locus_tag=AB25_RS21770;product=DUF1116 domain-containing protein;protein_id=WP_000495365.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 278854 279669 . + . ID=gene-AB25_RS21765;Name=ylbF;gbkey=Gene;gene=ylbF;gene_biotype=protein_coding;locus_tag=AB25_RS21765;old_locus_tag=AB25_0575 NZ_JJMC01000006.1 Protein Homology CDS 278854 279669 . + 0 ID=cds-WP_001298986.1;Parent=gene-AB25_RS21765;Dbxref=GenBank:WP_001298986.1;Name=WP_001298986.1;gbkey=CDS;gene=ylbF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308609.1;locus_tag=AB25_RS21765;product=DUF2877 domain-containing protein;protein_id=WP_001298986.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 279666 280559 . + . ID=gene-AB25_RS21760;Name=ybcF;gbkey=Gene;gene=ybcF;gene_biotype=protein_coding;locus_tag=AB25_RS21760;old_locus_tag=AB25_0576 NZ_JJMC01000006.1 Protein Homology CDS 279666 280559 . + 0 ID=cds-WP_000855355.1;Parent=gene-AB25_RS21760;Dbxref=GenBank:WP_000855355.1;Name=WP_000855355.1;Ontology_term=GO:0006525,GO:0008804;gbkey=CDS;gene=ybcF;go_function=carbamate kinase activity|0008804||IEA;go_process=arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706399.1;locus_tag=AB25_RS21760;product=carbamate kinase;protein_id=WP_000855355.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 280696 281763 . - . ID=gene-AB25_RS21755;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=AB25_RS21755;old_locus_tag=AB25_0577 NZ_JJMC01000006.1 Protein Homology CDS 280696 281763 . - 0 ID=cds-WP_032170602.1;Parent=gene-AB25_RS21755;Dbxref=GenBank:WP_032170602.1;Name=WP_032170602.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706400.2;locus_tag=AB25_RS21755;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_032170602.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 281760 282269 . - . ID=gene-AB25_RS21750;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=AB25_RS21750;old_locus_tag=AB25_0578 NZ_JJMC01000006.1 Protein Homology CDS 281760 282269 . - 0 ID=cds-WP_001295318.1;Parent=gene-AB25_RS21750;Dbxref=GenBank:WP_001295318.1;Name=WP_001295318.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308612.1;locus_tag=AB25_RS21750;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_001295318.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 282387 283109 . - . ID=gene-AB25_RS21745;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=AB25_RS21745;old_locus_tag=AB25_0579 NZ_JJMC01000006.1 Protein Homology CDS 282387 283109 . - 0 ID=cds-WP_000212251.1;Parent=gene-AB25_RS21745;Dbxref=GenBank:WP_000212251.1;Name=WP_000212251.1;Ontology_term=GO:0009245,GO:0008758,GO:0016462,GO:0005737;gbkey=CDS;gene=lpxH;go_component=cytoplasm|0005737||IEA;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA,pyrophosphatase activity|0016462||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706402.1;locus_tag=AB25_RS21745;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_000212251.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 283112 283606 . - . ID=gene-AB25_RS21740;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=AB25_RS21740;old_locus_tag=AB25_0580 NZ_JJMC01000006.1 Protein Homology CDS 283112 283606 . - 0 ID=cds-WP_000255997.1;Parent=gene-AB25_RS21740;Dbxref=GenBank:WP_000255997.1;Name=WP_000255997.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465360.1;locus_tag=AB25_RS21740;product=peptidylprolyl isomerase B;protein_id=WP_000255997.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 283780 285165 . + . ID=gene-AB25_RS21735;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=AB25_RS21735;old_locus_tag=AB25_0581 NZ_JJMC01000006.1 Protein Homology CDS 283780 285165 . + 0 ID=cds-WP_000912345.1;Parent=gene-AB25_RS21735;Dbxref=GenBank:WP_000912345.1;Name=WP_000912345.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125243.1;locus_tag=AB25_RS21735;product=cysteine--tRNA ligase;protein_id=WP_000912345.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 285201 285722 . - . ID=gene-AB25_RS21730;Name=ybcI;gbkey=Gene;gene=ybcI;gene_biotype=protein_coding;locus_tag=AB25_RS21730;old_locus_tag=AB25_0582 NZ_JJMC01000006.1 Protein Homology CDS 285201 285722 . - 0 ID=cds-WP_001143558.1;Parent=gene-AB25_RS21730;Dbxref=GenBank:WP_001143558.1;Name=WP_001143558.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;gene=ybcI;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308616.1;locus_tag=AB25_RS21730;product=metal-dependent hydrolase;protein_id=WP_001143558.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 285830 286042 . - . ID=gene-AB25_RS21725;Name=ybcJ;gbkey=Gene;gene=ybcJ;gene_biotype=protein_coding;locus_tag=AB25_RS21725;old_locus_tag=AB25_0583 NZ_JJMC01000006.1 Protein Homology CDS 285830 286042 . - 0 ID=cds-WP_000190288.1;Parent=gene-AB25_RS21725;Dbxref=GenBank:WP_000190288.1;Name=WP_000190288.1;gbkey=CDS;gene=ybcJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308617.2;locus_tag=AB25_RS21725;product=ribosome-associated protein YbcJ;protein_id=WP_000190288.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 286044 286910 . - . ID=gene-AB25_RS21720;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=AB25_RS21720;old_locus_tag=AB25_0584 NZ_JJMC01000006.1 Protein Homology CDS 286044 286910 . - 0 ID=cds-WP_000729160.1;Parent=gene-AB25_RS21720;Dbxref=GenBank:WP_000729160.1;Name=WP_000729160.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415062.1;locus_tag=AB25_RS21720;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_000729160.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 287381 287923 . + . ID=gene-AB25_RS21715;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=AB25_RS21715;old_locus_tag=AB25_0585 NZ_JJMC01000006.1 Protein Homology CDS 287381 287923 . + 0 ID=cds-WP_000776555.1;Parent=gene-AB25_RS21715;Dbxref=GenBank:WP_000776555.1;Name=WP_000776555.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=fimA;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308619.2;locus_tag=AB25_RS21715;product=type 1 fimbrial major subunit FimA;protein_id=WP_000776555.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 288143 288835 . + . ID=gene-AB25_RS21710;Name=fimC;gbkey=Gene;gene=fimC;gene_biotype=protein_coding;locus_tag=AB25_RS21710;old_locus_tag=AB25_0586 NZ_JJMC01000006.1 Protein Homology CDS 288143 288835 . + 0 ID=cds-WP_000988366.1;Parent=gene-AB25_RS21710;Dbxref=GenBank:WP_000988366.1;Name=WP_000988366.1;gbkey=CDS;gene=fimC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415064.1;locus_tag=AB25_RS21710;product=type 1 fimbria chaperone FimC;protein_id=WP_000988366.1;transl_table=11 NZ_JJMC01000006.1 RefSeq pseudogene 288866 291474 . + . ID=gene-AB25_RS30970;Name=sfmD;gbkey=Gene;gene=sfmD;gene_biotype=pseudogene;locus_tag=AB25_RS30970;pseudo=true NZ_JJMC01000006.1 Protein Homology CDS 288866 291474 . + 0 ID=cds-AB25_RS30970;Parent=gene-AB25_RS30970;Note=frameshifted%3B internal stop;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;gene=sfmD;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308621.1;locus_tag=AB25_RS30970;product=fimbrial biogenesis usher protein;pseudo=true;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 291487 292494 . + . ID=gene-AB25_RS21705;Name=fimH;gbkey=Gene;gene=fimH;gene_biotype=protein_coding;locus_tag=AB25_RS21705;old_locus_tag=AB25_0590 NZ_JJMC01000006.1 Protein Homology CDS 291487 292494 . + 0 ID=cds-WP_000691050.1;Parent=gene-AB25_RS21705;Dbxref=GenBank:WP_000691050.1;Name=WP_000691050.1;Ontology_term=GO:0007155;gbkey=CDS;gene=fimH;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308622.2;locus_tag=AB25_RS21705;product=type 1 fimbria D-mannose specific adhesin FimH;protein_id=WP_000691050.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 292505 293020 . + . ID=gene-AB25_RS0124555;Name=sfmF;gbkey=Gene;gene=sfmF;gene_biotype=protein_coding;locus_tag=AB25_RS0124555 NZ_JJMC01000006.1 Protein Homology CDS 292505 293020 . + 0 ID=cds-WP_001323731.1;Parent=gene-AB25_RS0124555;Dbxref=GenBank:WP_001323731.1;Name=WP_001323731.1;gbkey=CDS;gene=sfmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415067.1;locus_tag=AB25_RS0124555;product=fimbria assembly protein;protein_id=WP_001323731.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 293023 293655 . - . ID=gene-AB25_RS21700;Name=fimZ;gbkey=Gene;gene=fimZ;gene_biotype=protein_coding;locus_tag=AB25_RS21700;old_locus_tag=AB25_0592 NZ_JJMC01000006.1 Protein Homology CDS 293023 293655 . - 0 ID=cds-WP_000805432.1;Parent=gene-AB25_RS21700;Dbxref=GenBank:WP_000805432.1;Name=WP_000805432.1;gbkey=CDS;gene=fimZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308624.1;locus_tag=AB25_RS21700;product=fimbria biosynthesis transcriptional regulator FimZ;protein_id=WP_000805432.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 293898 293974 . + . ID=gene-AB25_RS21695;Name=AB25_RS21695;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS21695;old_locus_tag=AB25_0593 NZ_JJMC01000006.1 tRNAscan-SE tRNA 293898 293974 . + . ID=rna-AB25_RS21695;Parent=gene-AB25_RS21695;anticodon=(pos:293932..293934);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21695;product=tRNA-Arg NZ_JJMC01000006.1 tRNAscan-SE exon 293898 293974 . + . ID=exon-AB25_RS21695-1;Parent=rna-AB25_RS21695;anticodon=(pos:293932..293934);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21695;product=tRNA-Arg NZ_JJMC01000006.1 RefSeq gene 294020 294781 . - . ID=gene-AB25_RS21690;Name=envY;gbkey=Gene;gene=envY;gene_biotype=protein_coding;locus_tag=AB25_RS21690;old_locus_tag=AB25_0594 NZ_JJMC01000006.1 Protein Homology CDS 294020 294781 . - 0 ID=cds-WP_001177453.1;Parent=gene-AB25_RS21690;Dbxref=GenBank:WP_001177453.1;Name=WP_001177453.1;gbkey=CDS;gene=envY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308625.1;locus_tag=AB25_RS21690;product=DNA-binding transcriptional regulator EnvY;protein_id=WP_001177453.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 294964 295854 . - . ID=gene-AB25_RS21685;Name=ybcH;gbkey=Gene;gene=ybcH;gene_biotype=protein_coding;locus_tag=AB25_RS21685;old_locus_tag=AB25_0595 NZ_JJMC01000006.1 Protein Homology CDS 294964 295854 . - 0 ID=cds-WP_001224569.1;Parent=gene-AB25_RS21685;Dbxref=GenBank:WP_001224569.1;Name=WP_001224569.1;gbkey=CDS;gene=ybcH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308626.1;locus_tag=AB25_RS21685;product=DUF4434 family protein;protein_id=WP_001224569.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 295855 298827 . - . ID=gene-AB25_RS21680;Name=nfrA;gbkey=Gene;gene=nfrA;gene_biotype=protein_coding;locus_tag=AB25_RS21680;old_locus_tag=AB25_0596 NZ_JJMC01000006.1 Protein Homology CDS 295855 298827 . - 0 ID=cds-WP_032170603.1;Parent=gene-AB25_RS21680;Dbxref=GenBank:WP_032170603.1;Name=WP_032170603.1;gbkey=CDS;gene=nfrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415100.1;locus_tag=AB25_RS21680;product=bacteriophage adsorption protein NfrA;protein_id=WP_032170603.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 298814 301051 . - . ID=gene-AB25_RS21675;Name=nrfB;gbkey=Gene;gene=nrfB;gene_biotype=protein_coding;locus_tag=AB25_RS21675;old_locus_tag=AB25_0597 NZ_JJMC01000006.1 Protein Homology CDS 298814 301051 . - 0 ID=cds-WP_000383951.1;Parent=gene-AB25_RS21675;Dbxref=GenBank:WP_000383951.1;Name=WP_000383951.1;gbkey=CDS;gene=nrfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308628.1;locus_tag=AB25_RS21675;product=cyclic di-3'%2C5'-guanylate-activated glycosyltransferase NrfB;protein_id=WP_000383951.1;transl_table=11 NZ_JJMC01000006.1 RefSeq gene 301320 302130 . - . ID=gene-AB25_RS21670;Name=AB25_RS21670;end_range=302130,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS21670;old_locus_tag=AB25_0598;partial=true NZ_JJMC01000006.1 Protein Homology CDS 301320 302130 . - 1 ID=cds-WP_032295845.1;Parent=gene-AB25_RS21670;Dbxref=GenBank:WP_032295845.1;Name=WP_032295845.1;Ontology_term=GO:0006313,GO:0004803;end_range=302130,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AB25_RS21670;partial=true;product=ISAs1-like element ISEc1 family transposase;protein_id=WP_032295845.1;transl_table=11 ##sequence-region NZ_JJMC01000007.1 1 91593 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000007.1 RefSeq region 1 91593 . + . ID=NZ_JJMC01000007.1:1..91593;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000007.1 RefSeq gene 1 928 . - . ID=gene-AB25_RS21665;Name=AB25_RS21665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS21665;old_locus_tag=AB25_0599;partial=true;start_range=.,1 NZ_JJMC01000007.1 Protein Homology CDS 1 928 . - 0 ID=cds-WP_032295848.1;Parent=gene-AB25_RS21665;Dbxref=GenBank:WP_032295848.1;Name=WP_032295848.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AB25_RS21665;partial=true;product=ISAs1-like element ISEc1 family transposase;protein_id=WP_032295848.1;start_range=.,1;transl_table=11 NZ_JJMC01000007.1 RefSeq pseudogene 1074 1253 . - . ID=gene-AB25_RS32910;Name=AB25_RS32910;end_range=1253,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32910;partial=true;pseudo=true;start_range=.,1074 NZ_JJMC01000007.1 Protein Homology CDS 1074 1253 . - 0 ID=cds-AB25_RS32910;Parent=gene-AB25_RS32910;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1253,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308632.1;locus_tag=AB25_RS32910;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1074;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 1458 1667 . - . ID=gene-AB25_RS21655;Name=AB25_RS21655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS21655;old_locus_tag=AB25_0601 NZ_JJMC01000007.1 Protein Homology CDS 1458 1667 . - 0 ID=cds-WP_001299578.1;Parent=gene-AB25_RS21655;Dbxref=GenBank:WP_001299578.1;Name=WP_001299578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001299578.1;locus_tag=AB25_RS21655;product=hypothetical protein;protein_id=WP_001299578.1;transl_table=11 NZ_JJMC01000007.1 RefSeq pseudogene 1706 6568 . - . ID=gene-AB25_RS27685;Name=AB25_RS27685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS27685;pseudo=true NZ_JJMC01000007.1 Protein Homology CDS 1706 6568 . - 0 ID=cds-AB25_RS27685;Parent=gene-AB25_RS27685;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001616597.1;locus_tag=AB25_RS27685;product=zincin-like metallopeptidase toxin domain-containing protein;pseudo=true;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 6588 7049 . - . ID=gene-AB25_RS21640;Name=AB25_RS21640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS21640;old_locus_tag=AB25_0604 NZ_JJMC01000007.1 Protein Homology CDS 6588 7049 . - 0 ID=cds-WP_001160804.1;Parent=gene-AB25_RS21640;Dbxref=GenBank:WP_001160804.1;Name=WP_001160804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308633.1;locus_tag=AB25_RS21640;product=DcrB-related protein;protein_id=WP_001160804.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 7077 8978 . - . ID=gene-AB25_RS21635;Name=AB25_RS21635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS21635;old_locus_tag=AB25_0605 NZ_JJMC01000007.1 Protein Homology CDS 7077 8978 . - 0 ID=cds-WP_000103231.1;Parent=gene-AB25_RS21635;Dbxref=GenBank:WP_000103231.1;Name=WP_000103231.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308634.1;locus_tag=AB25_RS21635;product=type VI secretion system tip protein VgrG;protein_id=WP_000103231.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 9715 11163 . - . ID=gene-AB25_RS21630;Name=cusS;gbkey=Gene;gene=cusS;gene_biotype=protein_coding;locus_tag=AB25_RS21630;old_locus_tag=AB25_0606 NZ_JJMC01000007.1 Protein Homology CDS 9715 11163 . - 0 ID=cds-WP_000253805.1;Parent=gene-AB25_RS21630;Dbxref=GenBank:WP_000253805.1;Name=WP_000253805.1;gbkey=CDS;gene=cusS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739168.1;locus_tag=AB25_RS21630;product=Cu(+)/Ag(+) sensor histidine kinase CusS;protein_id=WP_000253805.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 11153 11836 . - . ID=gene-AB25_RS21625;Name=cusR;gbkey=Gene;gene=cusR;gene_biotype=protein_coding;locus_tag=AB25_RS21625;old_locus_tag=AB25_0607 NZ_JJMC01000007.1 Protein Homology CDS 11153 11836 . - 0 ID=cds-WP_000770944.1;Parent=gene-AB25_RS21625;Dbxref=GenBank:WP_000770944.1;Name=WP_000770944.1;gbkey=CDS;gene=cusR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308636.1;locus_tag=AB25_RS21625;product=copper response regulator transcription factor CusR;protein_id=WP_000770944.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 11993 13375 . + . ID=gene-AB25_RS21620;Name=cusC;gbkey=Gene;gene=cusC;gene_biotype=protein_coding;locus_tag=AB25_RS21620;old_locus_tag=AB25_0609 NZ_JJMC01000007.1 Protein Homology CDS 11993 13375 . + 0 ID=cds-WP_000074237.1;Parent=gene-AB25_RS21620;Dbxref=GenBank:WP_000074237.1;Name=WP_000074237.1;gbkey=CDS;gene=cusC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308637.1;locus_tag=AB25_RS21620;product=Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC;protein_id=WP_000074237.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 13399 13731 . + . ID=gene-AB25_RS21615;Name=cusF;gbkey=Gene;gene=cusF;gene_biotype=protein_coding;locus_tag=AB25_RS21615;old_locus_tag=AB25_0610 NZ_JJMC01000007.1 Protein Homology CDS 13399 13731 . + 0 ID=cds-WP_000709865.1;Parent=gene-AB25_RS21615;Dbxref=GenBank:WP_000709865.1;Name=WP_000709865.1;gbkey=CDS;gene=cusF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415105.1;locus_tag=AB25_RS21615;product=Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone CusF;protein_id=WP_000709865.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 13747 14970 . + . ID=gene-AB25_RS21610;Name=cusB;gbkey=Gene;gene=cusB;gene_biotype=protein_coding;locus_tag=AB25_RS21610;old_locus_tag=AB25_0611 NZ_JJMC01000007.1 Protein Homology CDS 13747 14970 . + 0 ID=cds-WP_000717157.1;Parent=gene-AB25_RS21610;Dbxref=GenBank:WP_000717157.1;Name=WP_000717157.1;gbkey=CDS;gene=cusB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415106.1;locus_tag=AB25_RS21610;product=Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit CusB;protein_id=WP_000717157.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 14982 18125 . + . ID=gene-AB25_RS21605;Name=cusA;gbkey=Gene;gene=cusA;gene_biotype=protein_coding;locus_tag=AB25_RS21605;old_locus_tag=AB25_0612 NZ_JJMC01000007.1 Protein Homology CDS 14982 18125 . + 0 ID=cds-WP_032179810.1;Parent=gene-AB25_RS21605;Dbxref=GenBank:WP_032179810.1;Name=WP_032179810.1;gbkey=CDS;gene=cusA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415107.1;locus_tag=AB25_RS21605;product=Cu(+)/Ag(+) efflux RND transporter permease subunit CusA;protein_id=WP_032179810.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 18227 19603 . + . ID=gene-AB25_RS21600;Name=pheP;gbkey=Gene;gene=pheP;gene_biotype=protein_coding;locus_tag=AB25_RS21600;old_locus_tag=AB25_0613 NZ_JJMC01000007.1 Protein Homology CDS 18227 19603 . + 0 ID=cds-WP_000786320.1;Parent=gene-AB25_RS21600;Dbxref=GenBank:WP_000786320.1;Name=WP_000786320.1;Ontology_term=GO:0006865;gbkey=CDS;gene=pheP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415108.1;locus_tag=AB25_RS21600;product=phenylalanine transporter;protein_id=WP_000786320.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 19671 20918 . - . ID=gene-AB25_RS21595;Name=ybdG;gbkey=Gene;gene=ybdG;gene_biotype=protein_coding;locus_tag=AB25_RS21595;old_locus_tag=AB25_0614 NZ_JJMC01000007.1 Protein Homology CDS 19671 20918 . - 0 ID=cds-WP_001153146.1;Parent=gene-AB25_RS21595;Dbxref=GenBank:WP_001153146.1;Name=WP_001153146.1;gbkey=CDS;gene=ybdG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415109.1;locus_tag=AB25_RS21595;product=mechanosensitive ion channel YbdG;protein_id=WP_001153146.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 21026 21679 . - . ID=gene-AB25_RS21590;Name=nfsB;gbkey=Gene;gene=nfsB;gene_biotype=protein_coding;locus_tag=AB25_RS21590;old_locus_tag=AB25_0615 NZ_JJMC01000007.1 Protein Homology CDS 21026 21679 . - 0 ID=cds-WP_000351443.1;Parent=gene-AB25_RS21590;Dbxref=GenBank:WP_000351443.1;Name=WP_000351443.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsB;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308643.1;locus_tag=AB25_RS21590;product=oxygen-insensitive NAD(P)H nitroreductase;protein_id=WP_000351443.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 21773 22141 . - . ID=gene-AB25_RS21585;Name=ybdF;gbkey=Gene;gene=ybdF;gene_biotype=protein_coding;locus_tag=AB25_RS21585;old_locus_tag=AB25_0616 NZ_JJMC01000007.1 Protein Homology CDS 21773 22141 . - 0 ID=cds-WP_000360951.1;Parent=gene-AB25_RS21585;Dbxref=GenBank:WP_000360951.1;Name=WP_000360951.1;gbkey=CDS;gene=ybdF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308644.1;locus_tag=AB25_RS21585;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000360951.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 22206 22454 . - . ID=gene-AB25_RS21580;Name=ybdJ;gbkey=Gene;gene=ybdJ;gene_biotype=protein_coding;locus_tag=AB25_RS21580;old_locus_tag=AB25_0617 NZ_JJMC01000007.1 Protein Homology CDS 22206 22454 . - 0 ID=cds-WP_000682515.1;Parent=gene-AB25_RS21580;Dbxref=GenBank:WP_000682515.1;Name=WP_000682515.1;gbkey=CDS;gene=ybdJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308645.1;locus_tag=AB25_RS21580;product=DUF1158 domain-containing protein;protein_id=WP_000682515.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 22520 23638 . - . ID=gene-AB25_RS21575;Name=ybdK;gbkey=Gene;gene=ybdK;gene_biotype=protein_coding;locus_tag=AB25_RS21575;old_locus_tag=AB25_0618 NZ_JJMC01000007.1 Protein Homology CDS 22520 23638 . - 0 ID=cds-WP_001130652.1;Parent=gene-AB25_RS21575;Dbxref=GenBank:WP_001130652.1;Name=WP_001130652.1;Ontology_term=GO:0042398,GO:0004357;gbkey=CDS;gene=ybdK;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415113.1;locus_tag=AB25_RS21575;product=YbdK family carboxylate-amine ligase;protein_id=WP_001130652.1;transl_table=11 NZ_JJMC01000007.1 RefSeq pseudogene 23854 24122 . - . ID=gene-AB25_RS32800;Name=AB25_RS32800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32800;pseudo=true NZ_JJMC01000007.1 Protein Homology CDS 23854 24122 . - 0 ID=cds-AB25_RS32800;Parent=gene-AB25_RS32800;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009008364.1;locus_tag=AB25_RS32800;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 24091 24243 . + . ID=gene-AB25_RS21570;Name=hokE;gbkey=Gene;gene=hokE;gene_biotype=protein_coding;locus_tag=AB25_RS21570;old_locus_tag=AB25_0619 NZ_JJMC01000007.1 Protein Homology CDS 24091 24243 . + 0 ID=cds-WP_000956455.1;Parent=gene-AB25_RS21570;Dbxref=GenBank:WP_000956455.1;Name=WP_000956455.1;gbkey=CDS;gene=hokE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025295.1;locus_tag=AB25_RS21570;product=type I toxin-antitoxin system toxin HokE;protein_id=WP_000956455.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 24365 24985 . - . ID=gene-AB25_RS21565;Name=entD;gbkey=Gene;gene=entD;gene_biotype=protein_coding;locus_tag=AB25_RS21565;old_locus_tag=AB25_0620 NZ_JJMC01000007.1 Protein Homology CDS 24365 24985 . - 0 ID=cds-WP_001749708.1;Parent=gene-AB25_RS21565;Dbxref=GenBank:WP_001749708.1;Name=WP_001749708.1;Ontology_term=GO:0009239,GO:0000287,GO:0008897,GO:0009366;gbkey=CDS;gene=entD;go_component=enterobactin synthetase complex|0009366||IEA;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=enterobactin biosynthetic process|0009239||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415115.2;locus_tag=AB25_RS21565;product=enterobactin synthase subunit EntD;protein_id=WP_001749708.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 25160 27400 . - . ID=gene-AB25_RS21560;Name=fepA;gbkey=Gene;gene=fepA;gene_biotype=protein_coding;locus_tag=AB25_RS21560;old_locus_tag=AB25_0621 NZ_JJMC01000007.1 Protein Homology CDS 25160 27400 . - 0 ID=cds-WP_001034904.1;Parent=gene-AB25_RS21560;Dbxref=GenBank:WP_001034904.1;Name=WP_001034904.1;gbkey=CDS;gene=fepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308650.1;locus_tag=AB25_RS21560;product=siderophore enterobactin receptor FepA;protein_id=WP_001034904.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 27643 28845 . + . ID=gene-AB25_RS21555;Name=fes;gbkey=Gene;gene=fes;gene_biotype=protein_coding;locus_tag=AB25_RS21555;old_locus_tag=AB25_0623 NZ_JJMC01000007.1 Protein Homology CDS 27643 28845 . + 0 ID=cds-WP_000125800.1;Parent=gene-AB25_RS21555;Dbxref=GenBank:WP_000125800.1;Name=WP_000125800.1;Ontology_term=GO:0005506,GO:0008849;gbkey=CDS;gene=fes;go_function=iron ion binding|0005506||IEA,enterochelin esterase activity|0008849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308651.2;locus_tag=AB25_RS21555;product=enterochelin esterase;protein_id=WP_000125800.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 28848 29066 . + . ID=gene-AB25_RS21550;Name=ybdZ;gbkey=Gene;gene=ybdZ;gene_biotype=protein_coding;locus_tag=AB25_RS21550;old_locus_tag=AB25_0624 NZ_JJMC01000007.1 Protein Homology CDS 28848 29066 . + 0 ID=cds-WP_000885779.1;Parent=gene-AB25_RS21550;Dbxref=GenBank:WP_000885779.1;Name=WP_000885779.1;gbkey=CDS;gene=ybdZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588441.1;locus_tag=AB25_RS21550;product=enterobactin biosynthesis protein YbdZ;protein_id=WP_000885779.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 29063 32944 . + . ID=gene-AB25_RS21545;Name=entF;gbkey=Gene;gene=entF;gene_biotype=protein_coding;locus_tag=AB25_RS21545;old_locus_tag=AB25_0625 NZ_JJMC01000007.1 Protein Homology CDS 29063 32944 . + 0 ID=cds-WP_000077801.1;Parent=gene-AB25_RS21545;Dbxref=GenBank:WP_000077801.1;Name=WP_000077801.1;Ontology_term=GO:0009058,GO:0003824,GO:0031177;gbkey=CDS;gene=entF;go_function=catalytic activity|0003824||IEA,phosphopantetheine binding|0031177||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415118.1;locus_tag=AB25_RS21545;product=enterobactin non-ribosomal peptide synthetase EntF;protein_id=WP_000077801.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 33160 34293 . + . ID=gene-AB25_RS21540;Name=wzz(fepE);gbkey=Gene;gene=wzz(fepE);gene_biotype=protein_coding;locus_tag=AB25_RS21540;old_locus_tag=AB25_0626 NZ_JJMC01000007.1 Protein Homology CDS 33160 34293 . + 0 ID=cds-WP_000096719.1;Parent=gene-AB25_RS21540;Dbxref=GenBank:WP_000096719.1;Name=WP_000096719.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzz(fepE);go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415119.1;locus_tag=AB25_RS21540;product=LPS O-antigen length regulator Wzz(fepE);protein_id=WP_000096719.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 34290 35105 . - . ID=gene-AB25_RS21535;Name=fepC;gbkey=Gene;gene=fepC;gene_biotype=protein_coding;locus_tag=AB25_RS21535;old_locus_tag=AB25_0627 NZ_JJMC01000007.1 Protein Homology CDS 34290 35105 . - 0 ID=cds-WP_000140647.1;Parent=gene-AB25_RS21535;Dbxref=GenBank:WP_000140647.1;Name=WP_000140647.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fepC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415120.1;locus_tag=AB25_RS21535;product=iron-enterobactin ABC transporter ATP-binding protein;protein_id=WP_000140647.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 35102 36094 . - . ID=gene-AB25_RS21530;Name=fepG;gbkey=Gene;gene=fepG;gene_biotype=protein_coding;locus_tag=AB25_RS21530;old_locus_tag=AB25_0628 NZ_JJMC01000007.1 Protein Homology CDS 35102 36094 . - 0 ID=cds-WP_000640948.1;Parent=gene-AB25_RS21530;Dbxref=GenBank:WP_000640948.1;Name=WP_000640948.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fepG;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308655.1;locus_tag=AB25_RS21530;product=iron-enterobactin ABC transporter permease;protein_id=WP_000640948.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 36091 37095 . - . ID=gene-AB25_RS21525;Name=fepD;gbkey=Gene;gene=fepD;gene_biotype=protein_coding;locus_tag=AB25_RS21525;old_locus_tag=AB25_0629 NZ_JJMC01000007.1 Protein Homology CDS 36091 37095 . - 0 ID=cds-WP_001295314.1;Parent=gene-AB25_RS21525;Dbxref=GenBank:WP_001295314.1;Name=WP_001295314.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=fepD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308656.1;locus_tag=AB25_RS21525;product=Fe(3+)-siderophore ABC transporter permease;protein_id=WP_001295314.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 37206 38456 . + . ID=gene-AB25_RS21520;Name=entS;gbkey=Gene;gene=entS;gene_biotype=protein_coding;locus_tag=AB25_RS21520;old_locus_tag=AB25_0630 NZ_JJMC01000007.1 Protein Homology CDS 37206 38456 . + 0 ID=cds-WP_001041784.1;Parent=gene-AB25_RS21520;Dbxref=GenBank:WP_001041784.1;Name=WP_001041784.1;Ontology_term=GO:0042930,GO:0042931;gbkey=CDS;gene=entS;go_function=enterobactin transmembrane transporter activity|0042931||IEA;go_process=enterobactin transport|0042930||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415123.1;locus_tag=AB25_RS21520;product=enterobactin transporter EntS;protein_id=WP_001041784.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 38460 39416 . - . ID=gene-AB25_RS21515;Name=fepB;gbkey=Gene;gene=fepB;gene_biotype=protein_coding;locus_tag=AB25_RS21515;old_locus_tag=AB25_0631 NZ_JJMC01000007.1 Protein Homology CDS 38460 39416 . - 0 ID=cds-WP_001234314.1;Parent=gene-AB25_RS21515;Dbxref=GenBank:WP_001234314.1;Name=WP_001234314.1;gbkey=CDS;gene=fepB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415124.1;locus_tag=AB25_RS21515;product=Fe2+-enterobactin ABC transporter substrate-binding protein;protein_id=WP_001234314.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 39791 40966 . + . ID=gene-AB25_RS21510;Name=entC;gbkey=Gene;gene=entC;gene_biotype=protein_coding;locus_tag=AB25_RS21510;old_locus_tag=AB25_0632 NZ_JJMC01000007.1 Protein Homology CDS 39791 40966 . + 0 ID=cds-WP_032221983.1;Parent=gene-AB25_RS21510;Dbxref=GenBank:WP_032221983.1;Name=WP_032221983.1;Ontology_term=GO:0008909;gbkey=CDS;gene=entC;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308659.1;locus_tag=AB25_RS21510;product=isochorismate synthase EntC;protein_id=WP_032221983.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 40976 42586 . + . ID=gene-AB25_RS21505;Name=entE;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=AB25_RS21505;old_locus_tag=AB25_0633 NZ_JJMC01000007.1 Protein Homology CDS 40976 42586 . + 0 ID=cds-WP_000026805.1;Parent=gene-AB25_RS21505;Dbxref=GenBank:WP_000026805.1;Name=WP_000026805.1;gbkey=CDS;gene=entE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415126.1;locus_tag=AB25_RS21505;product=(2%2C3-dihydroxybenzoyl)adenylate synthase EntE;protein_id=WP_000026805.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 42600 43457 . + . ID=gene-AB25_RS21500;Name=entB;gbkey=Gene;gene=entB;gene_biotype=protein_coding;locus_tag=AB25_RS21500;old_locus_tag=AB25_0634 NZ_JJMC01000007.1 Protein Homology CDS 42600 43457 . + 0 ID=cds-WP_001007142.1;Parent=gene-AB25_RS21500;Dbxref=GenBank:WP_001007142.1;Name=WP_001007142.1;gbkey=CDS;gene=entB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308661.1;locus_tag=AB25_RS21500;product=enterobactin biosynthesis bifunctional isochorismatase/aryl carrier protein EntB;protein_id=WP_001007142.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 43457 44203 . + . ID=gene-AB25_RS21495;Name=entA;gbkey=Gene;gene=entA;gene_biotype=protein_coding;locus_tag=AB25_RS21495;old_locus_tag=AB25_0635 NZ_JJMC01000007.1 Protein Homology CDS 43457 44203 . + 0 ID=cds-WP_000347664.1;Parent=gene-AB25_RS21495;Dbxref=GenBank:WP_000347664.1;Name=WP_000347664.1;gbkey=CDS;gene=entA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706451.2;locus_tag=AB25_RS21495;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase EntA;protein_id=WP_000347664.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 44206 44619 . + . ID=gene-AB25_RS21490;Name=entH;gbkey=Gene;gene=entH;gene_biotype=protein_coding;locus_tag=AB25_RS21490;old_locus_tag=AB25_0636 NZ_JJMC01000007.1 Protein Homology CDS 44206 44619 . + 0 ID=cds-WP_000637953.1;Parent=gene-AB25_RS21490;Dbxref=GenBank:WP_000637953.1;Name=WP_000637953.1;gbkey=CDS;gene=entH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415129.1;locus_tag=AB25_RS21490;product=proofreading thioesterase EntH;protein_id=WP_000637953.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 44800 46905 . + . ID=gene-AB25_RS21485;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=AB25_RS21485;old_locus_tag=AB25_0637 NZ_JJMC01000007.1 Protein Homology CDS 44800 46905 . + 0 ID=cds-WP_001043134.1;Parent=gene-AB25_RS21485;Dbxref=GenBank:WP_001043134.1;Name=WP_001043134.1;Ontology_term=GO:0009267;gbkey=CDS;gene=cstA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415130.1;locus_tag=AB25_RS21485;product=pyruvate/proton symporter CstA;protein_id=WP_001043134.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 47087 47284 . + . ID=gene-AB25_RS21480;Name=ybdD;gbkey=Gene;gene=ybdD;gene_biotype=protein_coding;locus_tag=AB25_RS21480;old_locus_tag=AB25_0638 NZ_JJMC01000007.1 Protein Homology CDS 47087 47284 . + 0 ID=cds-WP_000460431.1;Parent=gene-AB25_RS21480;Dbxref=GenBank:WP_000460431.1;Name=WP_000460431.1;gbkey=CDS;gene=ybdD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904950.1;locus_tag=AB25_RS21480;product=YbdD/YjiX family protein;protein_id=WP_000460431.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 47294 48382 . - . ID=gene-AB25_RS21475;Name=hcxA;gbkey=Gene;gene=hcxA;gene_biotype=protein_coding;locus_tag=AB25_RS21475;old_locus_tag=AB25_0639 NZ_JJMC01000007.1 Protein Homology CDS 47294 48382 . - 0 ID=cds-WP_001120434.1;Parent=gene-AB25_RS21475;Dbxref=GenBank:WP_001120434.1;Name=WP_001120434.1;gbkey=CDS;gene=hcxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308665.1;locus_tag=AB25_RS21475;product=hydroxycarboxylate dehydrogenase HcxA;protein_id=WP_001120434.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 48491 49651 . + . ID=gene-AB25_RS21470;Name=ybdL;gbkey=Gene;gene=ybdL;gene_biotype=protein_coding;locus_tag=AB25_RS21470;old_locus_tag=AB25_0640 NZ_JJMC01000007.1 Protein Homology CDS 48491 49651 . + 0 ID=cds-WP_000183939.1;Parent=gene-AB25_RS21470;Dbxref=GenBank:WP_000183939.1;Name=WP_000183939.1;gbkey=CDS;gene=ybdL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706456.1;locus_tag=AB25_RS21470;product=methionine-oxo-acid transaminase;protein_id=WP_000183939.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 49652 50281 . - . ID=gene-AB25_RS21465;Name=ybdM;gbkey=Gene;gene=ybdM;gene_biotype=protein_coding;locus_tag=AB25_RS21465;old_locus_tag=AB25_0641 NZ_JJMC01000007.1 Protein Homology CDS 49652 50281 . - 0 ID=cds-WP_000502952.1;Parent=gene-AB25_RS21465;Dbxref=GenBank:WP_000502952.1;Name=WP_000502952.1;Ontology_term=GO:0071453,GO:0003677;gbkey=CDS;gene=ybdM;go_function=DNA binding|0003677||IEA;go_process=cellular response to oxygen levels|0071453||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308667.1;locus_tag=AB25_RS21465;product=IbrB-like domain-containing protein;protein_id=WP_000502952.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 50254 51474 . - . ID=gene-AB25_RS21460;Name=ybdN;gbkey=Gene;gene=ybdN;gene_biotype=protein_coding;locus_tag=AB25_RS21460;old_locus_tag=AB25_0642 NZ_JJMC01000007.1 Protein Homology CDS 50254 51474 . - 0 ID=cds-WP_000029813.1;Parent=gene-AB25_RS21460;Dbxref=GenBank:WP_000029813.1;Name=WP_000029813.1;gbkey=CDS;gene=ybdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308668.1;locus_tag=AB25_RS21460;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_000029813.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 51621 52523 . - . ID=gene-AB25_RS21455;Name=citR;gbkey=Gene;gene=citR;gene_biotype=protein_coding;gene_synonym=ybdO;locus_tag=AB25_RS21455;old_locus_tag=AB25_0643 NZ_JJMC01000007.1 Protein Homology CDS 51621 52523 . - 0 ID=cds-WP_000002439.1;Parent=gene-AB25_RS21455;Dbxref=GenBank:WP_000002439.1;Name=WP_000002439.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=citR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415136.1;locus_tag=AB25_RS21455;product=DNA-binding transcriptional repressor CitR;protein_id=WP_000002439.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 52732 53478 . - . ID=gene-AB25_RS21450;Name=dsbG;gbkey=Gene;gene=dsbG;gene_biotype=protein_coding;locus_tag=AB25_RS21450;old_locus_tag=AB25_0644 NZ_JJMC01000007.1 Protein Homology CDS 52732 53478 . - 0 ID=cds-WP_000913829.1;Parent=gene-AB25_RS21450;Dbxref=GenBank:WP_000913829.1;Name=WP_000913829.1;gbkey=CDS;gene=dsbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415137.2;locus_tag=AB25_RS21450;product=thiol:disulfide interchange protein DsbG;protein_id=WP_000913829.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 53849 54412 . + . ID=gene-AB25_RS21445;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=AB25_RS21445;old_locus_tag=AB25_0645 NZ_JJMC01000007.1 Protein Homology CDS 53849 54412 . + 0 ID=cds-WP_000052796.1;Parent=gene-AB25_RS21445;Dbxref=GenBank:WP_000052796.1;Name=WP_000052796.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1;locus_tag=AB25_RS21445;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_000052796.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 54583 56148 . + . ID=gene-AB25_RS21440;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=AB25_RS21440;old_locus_tag=AB25_0647 NZ_JJMC01000007.1 Protein Homology CDS 54583 56148 . + 0 ID=cds-WP_000887629.1;Parent=gene-AB25_RS21440;Dbxref=GenBank:WP_000887629.1;Name=WP_000887629.1;Ontology_term=GO:0000302,GO:0008785,GO:0050660,GO:0051287;gbkey=CDS;gene=ahpF;go_function=alkyl hydroperoxide reductase activity|0008785||IEA,flavin adenine dinucleotide binding|0050660||IEA,NAD binding|0051287||IEA;go_process=response to reactive oxygen species|0000302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455864.1;locus_tag=AB25_RS21440;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_000887629.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 56269 56697 . - . ID=gene-AB25_RS21435;Name=uspG;gbkey=Gene;gene=uspG;gene_biotype=protein_coding;locus_tag=AB25_RS21435;old_locus_tag=AB25_0648 NZ_JJMC01000007.1 Protein Homology CDS 56269 56697 . - 0 ID=cds-WP_000278505.1;Parent=gene-AB25_RS21435;Dbxref=GenBank:WP_000278505.1;Name=WP_000278505.1;gbkey=CDS;gene=uspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308673.1;locus_tag=AB25_RS21435;product=universal stress protein UspG;protein_id=WP_000278505.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 56918 58156 . + . ID=gene-AB25_RS21430;Name=ybdR;gbkey=Gene;gene=ybdR;gene_biotype=protein_coding;locus_tag=AB25_RS21430;old_locus_tag=AB25_0649 NZ_JJMC01000007.1 Protein Homology CDS 56918 58156 . + 0 ID=cds-WP_000646150.1;Parent=gene-AB25_RS21430;Dbxref=GenBank:WP_000646150.1;Name=WP_000646150.1;Ontology_term=GO:0008270,GO:0016616,GO:0030554;gbkey=CDS;gene=ybdR;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308674.1;locus_tag=AB25_RS21430;product=zinc-dependent alcohol dehydrogenase;protein_id=WP_000646150.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 58160 58249 . - . ID=gene-AB25_RS32665;Name=yldA;gbkey=Gene;gene=yldA;gene_biotype=protein_coding;locus_tag=AB25_RS32665 NZ_JJMC01000007.1 Protein Homology CDS 58160 58249 . - 0 ID=cds-WP_000796528.1;Parent=gene-AB25_RS32665;Dbxref=GenBank:WP_000796528.1;Name=WP_000796528.1;gbkey=CDS;gene=yldA;inference=COORDINATES: protein motif:HMM:NF041476.1;locus_tag=AB25_RS32665;product=small membrane protein YldA;protein_id=WP_000796528.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 58387 58797 . - . ID=gene-AB25_RS21425;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;locus_tag=AB25_RS21425;old_locus_tag=AB25_0651 NZ_JJMC01000007.1 Protein Homology CDS 58387 58797 . - 0 ID=cds-WP_000089731.1;Parent=gene-AB25_RS21425;Dbxref=GenBank:WP_000089731.1;Name=WP_000089731.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=rnk;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308676.1;locus_tag=AB25_RS21425;product=nucleoside diphosphate kinase regulator;protein_id=WP_000089731.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 59027 59833 . - . ID=gene-AB25_RS21420;Name=rna;gbkey=Gene;gene=rna;gene_biotype=protein_coding;locus_tag=AB25_RS21420;old_locus_tag=AB25_0652 NZ_JJMC01000007.1 Protein Homology CDS 59027 59833 . - 0 ID=cds-WP_001297277.1;Parent=gene-AB25_RS21420;Dbxref=GenBank:WP_001297277.1;Name=WP_001297277.1;gbkey=CDS;gene=rna;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415144.1;locus_tag=AB25_RS21420;product=ribonuclease I;protein_id=WP_001297277.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 59947 61410 . - . ID=gene-AB25_RS21415;Name=citT;gbkey=Gene;gene=citT;gene_biotype=protein_coding;locus_tag=AB25_RS21415;old_locus_tag=AB25_0653 NZ_JJMC01000007.1 Protein Homology CDS 59947 61410 . - 0 ID=cds-WP_000050323.1;Parent=gene-AB25_RS21415;Dbxref=GenBank:WP_000050323.1;Name=WP_000050323.1;gbkey=CDS;gene=citT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308678.1;locus_tag=AB25_RS21415;product=citrate/succinate antiporter CitT;protein_id=WP_000050323.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 61461 62339 . - . ID=gene-AB25_RS21410;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=AB25_RS21410;old_locus_tag=AB25_0654 NZ_JJMC01000007.1 Protein Homology CDS 61461 62339 . - 0 ID=cds-WP_000062457.1;Parent=gene-AB25_RS21410;Dbxref=GenBank:WP_000062457.1;Name=WP_000062457.1;gbkey=CDS;gene=citG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415146.1;locus_tag=AB25_RS21410;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_000062457.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 62314 62865 . - . ID=gene-AB25_RS21405;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=AB25_RS21405;old_locus_tag=AB25_0655 NZ_JJMC01000007.1 Protein Homology CDS 62314 62865 . - 0 ID=cds-WP_000550422.1;Parent=gene-AB25_RS21405;Dbxref=GenBank:WP_000550422.1;Name=WP_000550422.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308680.1;locus_tag=AB25_RS21405;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_000550422.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 62869 64401 . - . ID=gene-AB25_RS21400;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=AB25_RS21400;old_locus_tag=AB25_0656 NZ_JJMC01000007.1 Protein Homology CDS 62869 64401 . - 0 ID=cds-WP_000192245.1;Parent=gene-AB25_RS21400;Dbxref=GenBank:WP_000192245.1;Name=WP_000192245.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415148.1;locus_tag=AB25_RS21400;product=citrate lyase subunit alpha;protein_id=WP_000192245.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 64412 65320 . - . ID=gene-AB25_RS21395;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=AB25_RS21395;old_locus_tag=AB25_0657 NZ_JJMC01000007.1 Protein Homology CDS 64412 65320 . - 0 ID=cds-WP_000622357.1;Parent=gene-AB25_RS21395;Dbxref=GenBank:WP_000622357.1;Name=WP_000622357.1;Ontology_term=GO:0006084,GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citE;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=acetyl-CoA metabolic process|0006084||IEA,fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415149.4;locus_tag=AB25_RS21395;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_000622357.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 65317 65613 . - . ID=gene-AB25_RS21390;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=AB25_RS21390;old_locus_tag=AB25_0658 NZ_JJMC01000007.1 Protein Homology CDS 65317 65613 . - 0 ID=cds-WP_000700703.1;Parent=gene-AB25_RS21390;Dbxref=GenBank:WP_000700703.1;Name=WP_000700703.1;Ontology_term=GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citD;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308683.1;locus_tag=AB25_RS21390;product=citrate lyase acyl carrier protein;protein_id=WP_000700703.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 65628 66686 . - . ID=gene-AB25_RS21385;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=AB25_RS21385;old_locus_tag=AB25_0659 NZ_JJMC01000007.1 Protein Homology CDS 65628 66686 . - 0 ID=cds-WP_000467705.1;Parent=gene-AB25_RS21385;Dbxref=GenBank:WP_000467705.1;Name=WP_000467705.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415151.4;locus_tag=AB25_RS21385;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_000467705.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 67066 68724 . + . ID=gene-AB25_RS21380;Name=dpiB;gbkey=Gene;gene=dpiB;gene_biotype=protein_coding;locus_tag=AB25_RS21380;old_locus_tag=AB25_0660 NZ_JJMC01000007.1 Protein Homology CDS 67066 68724 . + 0 ID=cds-WP_000939766.1;Parent=gene-AB25_RS21380;Dbxref=GenBank:WP_000939766.1;Name=WP_000939766.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=dpiB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308685.1;locus_tag=AB25_RS21380;product=sensor histidine kinase DpiB;protein_id=WP_000939766.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 68693 69373 . + . ID=gene-AB25_RS21375;Name=dpiA;gbkey=Gene;gene=dpiA;gene_biotype=protein_coding;gene_synonym=citB;locus_tag=AB25_RS21375;old_locus_tag=AB25_0661 NZ_JJMC01000007.1 Protein Homology CDS 68693 69373 . + 0 ID=cds-WP_000126500.1;Parent=gene-AB25_RS21375;Dbxref=GenBank:WP_000126500.1;Name=WP_000126500.1;gbkey=CDS;gene=dpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308686.1;locus_tag=AB25_RS21375;product=two-component response regulator DpiA;protein_id=WP_000126500.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 69414 70799 . - . ID=gene-AB25_RS21370;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=AB25_RS21370;old_locus_tag=AB25_0662 NZ_JJMC01000007.1 Protein Homology CDS 69414 70799 . - 0 ID=cds-WP_000955063.1;Parent=gene-AB25_RS21370;Dbxref=GenBank:WP_000955063.1;Name=WP_000955063.1;Ontology_term=GO:0015740,GO:0015556;gbkey=CDS;gene=dcuC;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308687.1;locus_tag=AB25_RS21370;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WP_000955063.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 71388 71948 . + . ID=gene-AB25_RS21365;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=protein_coding;locus_tag=AB25_RS21365;old_locus_tag=AB25_0664 NZ_JJMC01000007.1 Protein Homology CDS 71388 71948 . + 0 ID=cds-WP_001103094.1;Parent=gene-AB25_RS21365;Dbxref=GenBank:WP_001103094.1;Name=WP_001103094.1;gbkey=CDS;gene=pagP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415155.1;locus_tag=AB25_RS21365;product=lipid IV(A) palmitoyltransferase PagP;protein_id=WP_001103094.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 72123 72332 . + . ID=gene-AB25_RS21360;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=AB25_RS21360;old_locus_tag=AB25_0665 NZ_JJMC01000007.1 Protein Homology CDS 72123 72332 . + 0 ID=cds-WP_000034825.1;Parent=gene-AB25_RS21360;Dbxref=GenBank:WP_000034825.1;Name=WP_000034825.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308689.1;locus_tag=AB25_RS21360;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000034825.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 72386 72769 . - . ID=gene-AB25_RS21355;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=AB25_RS21355;old_locus_tag=AB25_0666 NZ_JJMC01000007.1 Protein Homology CDS 72386 72769 . - 0 ID=cds-WP_000939749.1;Parent=gene-AB25_RS21355;Dbxref=GenBank:WP_000939749.1;Name=WP_000939749.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308690.1;locus_tag=AB25_RS21355;product=fluoride efflux transporter CrcB;protein_id=WP_000939749.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 72862 73650 . + . ID=gene-AB25_RS21350;Name=AB25_RS21350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS21350;old_locus_tag=AB25_0667 NZ_JJMC01000007.1 Protein Homology CDS 72862 73650 . + 0 ID=cds-WP_000959109.1;Parent=gene-AB25_RS21350;Dbxref=GenBank:WP_000959109.1;Name=WP_000959109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308691.1;locus_tag=AB25_RS21350;product=deaminated glutathione amidase;protein_id=WP_000959109.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 73779 73982 . + . ID=gene-AB25_RS21345;Name=tatE;gbkey=Gene;gene=tatE;gene_biotype=protein_coding;locus_tag=AB25_RS21345;old_locus_tag=AB25_0668 NZ_JJMC01000007.1 Protein Homology CDS 73779 73982 . + 0 ID=cds-WP_000503931.1;Parent=gene-AB25_RS21345;Dbxref=GenBank:WP_000503931.1;Name=WP_000503931.1;gbkey=CDS;gene=tatE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308692.1;locus_tag=AB25_RS21345;product=twin-arginine translocase subunit TatE;protein_id=WP_000503931.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 74083 75048 . - . ID=gene-AB25_RS21340;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=AB25_RS21340;old_locus_tag=AB25_0669 NZ_JJMC01000007.1 Protein Homology CDS 74083 75048 . - 0 ID=cds-WP_000042622.1;Parent=gene-AB25_RS21340;Dbxref=GenBank:WP_000042622.1;Name=WP_000042622.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1;locus_tag=AB25_RS21340;product=lipoyl synthase;protein_id=WP_000042622.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 75257 76210 . - . ID=gene-AB25_RS21335;Name=ybeF;gbkey=Gene;gene=ybeF;gene_biotype=protein_coding;locus_tag=AB25_RS21335;old_locus_tag=AB25_0670 NZ_JJMC01000007.1 Protein Homology CDS 75257 76210 . - 0 ID=cds-WP_000378019.1;Parent=gene-AB25_RS21335;Dbxref=GenBank:WP_000378019.1;Name=WP_000378019.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ybeF;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415162.4;locus_tag=AB25_RS21335;product=YbeF family transcriptional regulator;protein_id=WP_000378019.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 76469 77110 . - . ID=gene-AB25_RS21330;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=AB25_RS21330;old_locus_tag=AB25_0671 NZ_JJMC01000007.1 Protein Homology CDS 76469 77110 . - 0 ID=cds-WP_000284027.1;Parent=gene-AB25_RS21330;Dbxref=GenBank:WP_000284027.1;Name=WP_000284027.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415163.2;locus_tag=AB25_RS21330;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_000284027.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 77211 77474 . - . ID=gene-AB25_RS21325;Name=ybeD;gbkey=Gene;gene=ybeD;gene_biotype=protein_coding;locus_tag=AB25_RS21325;old_locus_tag=AB25_0672 NZ_JJMC01000007.1 Protein Homology CDS 77211 77474 . - 0 ID=cds-WP_000850550.1;Parent=gene-AB25_RS21325;Dbxref=GenBank:WP_000850550.1;Name=WP_000850550.1;gbkey=CDS;gene=ybeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308696.1;locus_tag=AB25_RS21325;product=DUF493 family protein YbeD;protein_id=WP_000850550.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 77585 78796 . - . ID=gene-AB25_RS21320;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;locus_tag=AB25_RS21320;old_locus_tag=AB25_0673 NZ_JJMC01000007.1 Protein Homology CDS 77585 78796 . - 0 ID=cds-WP_001092082.1;Parent=gene-AB25_RS21320;Dbxref=GenBank:WP_001092082.1;Name=WP_001092082.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacA;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415165.1;locus_tag=AB25_RS21320;product=D-alanyl-D-alanine carboxypeptidase DacA;protein_id=WP_001092082.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 78936 80024 . - . ID=gene-AB25_RS21315;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=AB25_RS21315;old_locus_tag=AB25_0675 NZ_JJMC01000007.1 Protein Homology CDS 78936 80024 . - 0 ID=cds-WP_001481395.1;Parent=gene-AB25_RS21315;Dbxref=GenBank:WP_001481395.1;Name=WP_001481395.1;Ontology_term=GO:0042834;gbkey=CDS;gene=rlpA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415166.1;locus_tag=AB25_RS21315;product=endolytic peptidoglycan transglycosylase RlpA;protein_id=WP_001481395.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 80035 81147 . - . ID=gene-AB25_RS21310;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;gene_synonym=rodA;locus_tag=AB25_RS21310;old_locus_tag=AB25_0676 NZ_JJMC01000007.1 Protein Homology CDS 80035 81147 . - 0 ID=cds-WP_000131719.1;Parent=gene-AB25_RS21310;Dbxref=GenBank:WP_000131719.1;Name=WP_000131719.1;Note=rod shape-determining protein RodA;gbkey=CDS;gene=mrdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004885876.1;locus_tag=AB25_RS21310;product=peptidoglycan glycosyltransferase MrdB;protein_id=WP_000131719.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 81150 83051 . - . ID=gene-AB25_RS21305;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=AB25_RS21305;old_locus_tag=AB25_0677 NZ_JJMC01000007.1 Protein Homology CDS 81150 83051 . - 0 ID=cds-WP_000776191.1;Parent=gene-AB25_RS21305;Dbxref=GenBank:WP_000776191.1;Name=WP_000776191.1;Ontology_term=GO:0009252,GO:0008658,GO:0009002,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308700.1;locus_tag=AB25_RS21305;product=peptidoglycan DD-transpeptidase MrdA;protein_id=WP_000776191.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 83082 83549 . - . ID=gene-AB25_RS21300;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=AB25_RS21300;old_locus_tag=AB25_0678 NZ_JJMC01000007.1 Protein Homology CDS 83082 83549 . - 0 ID=cds-WP_000776104.1;Parent=gene-AB25_RS21300;Dbxref=GenBank:WP_000776104.1;Name=WP_000776104.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245807.1;locus_tag=AB25_RS21300;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_000776104.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 83553 83870 . - . ID=gene-AB25_RS21295;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=AB25_RS21295;old_locus_tag=AB25_0679 NZ_JJMC01000007.1 Protein Homology CDS 83553 83870 . - 0 ID=cds-WP_001161664.1;Parent=gene-AB25_RS21295;Dbxref=GenBank:WP_001161664.1;Name=WP_001161664.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373852.1;locus_tag=AB25_RS21295;product=ribosome silencing factor;protein_id=WP_001161664.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 84130 84741 . - . ID=gene-AB25_RS21290;Name=cobC;gbkey=Gene;gene=cobC;gene_biotype=protein_coding;locus_tag=AB25_RS21290;old_locus_tag=AB25_0680 NZ_JJMC01000007.1 Protein Homology CDS 84130 84741 . - 0 ID=cds-WP_001241899.1;Parent=gene-AB25_RS21290;Dbxref=GenBank:WP_001241899.1;Name=WP_001241899.1;Ontology_term=GO:0009236,GO:0043755;gbkey=CDS;gene=cobC;go_function=alpha-ribazole phosphatase activity|0043755||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415171.1;locus_tag=AB25_RS21290;product=adenosylcobalamin/alpha-ribazole phosphatase;protein_id=WP_001241899.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 84765 85406 . - . ID=gene-AB25_RS21285;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=AB25_RS21285;old_locus_tag=AB25_0681 NZ_JJMC01000007.1 Protein Homology CDS 84765 85406 . - 0 ID=cds-WP_000838889.1;Parent=gene-AB25_RS21285;Dbxref=GenBank:WP_000838889.1;Name=WP_000838889.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415172.1;locus_tag=AB25_RS21285;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_000838889.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 85408 86439 . - . ID=gene-AB25_RS21280;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=AB25_RS21280;old_locus_tag=AB25_0682 NZ_JJMC01000007.1 Protein Homology CDS 85408 86439 . - 0 ID=cds-WP_000620532.1;Parent=gene-AB25_RS21280;Dbxref=GenBank:WP_000620532.1;Name=WP_000620532.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308705.1;locus_tag=AB25_RS21280;product=DNA polymerase III subunit delta;protein_id=WP_000620532.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 86439 87020 . - . ID=gene-AB25_RS21275;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=AB25_RS21275;old_locus_tag=AB25_0683 NZ_JJMC01000007.1 Protein Homology CDS 86439 87020 . - 0 ID=cds-WP_001269673.1;Parent=gene-AB25_RS21275;Dbxref=GenBank:WP_001269673.1;Name=WP_001269673.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415174.1;locus_tag=AB25_RS21275;product=LPS assembly lipoprotein LptE;protein_id=WP_001269673.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 87035 89617 . - . ID=gene-AB25_RS21270;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=AB25_RS21270;old_locus_tag=AB25_0684 NZ_JJMC01000007.1 Protein Homology CDS 87035 89617 . - 0 ID=cds-WP_001157890.1;Parent=gene-AB25_RS21270;Dbxref=GenBank:WP_001157890.1;Name=WP_001157890.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1;locus_tag=AB25_RS21270;product=leucine--tRNA ligase;protein_id=WP_001157890.1;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 89852 90334 . + . ID=gene-AB25_RS21265;Name=ybeL;gbkey=Gene;gene=ybeL;gene_biotype=protein_coding;locus_tag=AB25_RS21265;old_locus_tag=AB25_0685 NZ_JJMC01000007.1 Protein Homology CDS 89852 90334 . + 0 ID=cds-WP_001044880.1;Parent=gene-AB25_RS21265;Dbxref=GenBank:WP_001044880.1;Name=WP_001044880.1;gbkey=CDS;gene=ybeL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308708.1;locus_tag=AB25_RS21265;product=zinc ribbon-containing protein;protein_id=WP_001044880.1;transl_table=11 NZ_JJMC01000007.1 RefSeq pseudogene 90404 90838 . - . ID=gene-AB25_RS0124575;Name=ybeQ;end_range=90838,.;gbkey=Gene;gene=ybeQ;gene_biotype=pseudogene;locus_tag=AB25_RS0124575;old_locus_tag=AB25_0686;partial=true;pseudo=true NZ_JJMC01000007.1 Protein Homology CDS 90404 90838 . - 0 ID=cds-AB25_RS0124575;Parent=gene-AB25_RS0124575;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=90838,.;gbkey=CDS;gene=ybeQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415177.4;locus_tag=AB25_RS0124575;partial=true;product=Sel1 family TPR-like repeat protein YbeQ;pseudo=true;transl_table=11 NZ_JJMC01000007.1 RefSeq gene 90856 91553 . - . ID=gene-AB25_RS21260;Name=AB25_RS21260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS21260;old_locus_tag=AB25_0687 NZ_JJMC01000007.1 Protein Homology CDS 91304 91553 . - 0 ID=cds-WP_103215986.1;Parent=gene-AB25_RS21260;Dbxref=GenBank:WP_103215986.1;Name=WP_103215986.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB25_RS21260;product=IS1-like element IS1A family transposase;protein_id=WP_103215986.1;transl_table=11 NZ_JJMC01000007.1 Protein Homology CDS 90856 91304 . - 2 ID=cds-WP_103215986.1;Parent=gene-AB25_RS21260;Dbxref=GenBank:WP_103215986.1;Name=WP_103215986.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB25_RS21260;product=IS1-like element IS1A family transposase;protein_id=WP_103215986.1;transl_table=11 ##sequence-region NZ_JJMC01000008.1 1 22493 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000008.1 RefSeq region 1 22493 . + . ID=NZ_JJMC01000008.1:1..22493;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000008.1 RefSeq pseudogene 1 566 . - . ID=gene-AB25_RS21255;Name=AB25_RS21255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS21255;old_locus_tag=AB25_0688;partial=true;pseudo=true;start_range=.,1 NZ_JJMC01000008.1 Protein Homology CDS 1 566 . - 0 ID=cds-AB25_RS21255;Parent=gene-AB25_RS21255;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=AB25_RS21255;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJMC01000008.1 RefSeq pseudogene 623 1171 . - . ID=gene-AB25_RS21250;Name=ybeQ;gbkey=Gene;gene=ybeQ;gene_biotype=pseudogene;locus_tag=AB25_RS21250;old_locus_tag=AB25_0689;partial=true;pseudo=true;start_range=.,623 NZ_JJMC01000008.1 Protein Homology CDS 623 1171 . - 0 ID=cds-AB25_RS21250;Parent=gene-AB25_RS21250;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=ybeQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415177.4;locus_tag=AB25_RS21250;partial=true;product=Sel1 family TPR-like repeat protein YbeQ;pseudo=true;start_range=.,623;transl_table=11 NZ_JJMC01000008.1 RefSeq gene 1335 2042 . + . ID=gene-AB25_RS21245;Name=ybeR;gbkey=Gene;gene=ybeR;gene_biotype=protein_coding;locus_tag=AB25_RS21245;old_locus_tag=AB25_0691 NZ_JJMC01000008.1 Protein Homology CDS 1335 2042 . + 0 ID=cds-WP_000367023.1;Parent=gene-AB25_RS21245;Dbxref=GenBank:WP_000367023.1;Name=WP_000367023.1;gbkey=CDS;gene=ybeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415178.1;locus_tag=AB25_RS21245;product=DUF1266 domain-containing protein;protein_id=WP_000367023.1;transl_table=11 NZ_JJMC01000008.1 RefSeq gene 2039 3466 . + . ID=gene-AB25_RS21240;Name=djlB;gbkey=Gene;gene=djlB;gene_biotype=protein_coding;locus_tag=AB25_RS21240;old_locus_tag=AB25_0692 NZ_JJMC01000008.1 Protein Homology CDS 2039 3466 . + 0 ID=cds-WP_000786577.1;Parent=gene-AB25_RS21240;Dbxref=GenBank:WP_000786577.1;Name=WP_000786577.1;Ontology_term=GO:0006457;gbkey=CDS;gene=djlB;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415179.1;locus_tag=AB25_RS21240;product=J domain-containing protein;protein_id=WP_000786577.1;transl_table=11 NZ_JJMC01000008.1 RefSeq gene 3476 4030 . - . ID=gene-AB25_RS21235;Name=ybeT;gbkey=Gene;gene=ybeT;gene_biotype=protein_coding;locus_tag=AB25_RS21235;old_locus_tag=AB25_0693 NZ_JJMC01000008.1 Protein Homology CDS 3476 4030 . - 0 ID=cds-WP_001035666.1;Parent=gene-AB25_RS21235;Dbxref=GenBank:WP_001035666.1;Name=WP_001035666.1;Ontology_term=GO:0005515;gbkey=CDS;gene=ybeT;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308712.1;locus_tag=AB25_RS21235;product=tetratricopeptide repeat protein;protein_id=WP_001035666.1;transl_table=11 NZ_JJMC01000008.1 RefSeq gene 4132 4839 . + . ID=gene-AB25_RS21230;Name=ybeU;gbkey=Gene;gene=ybeU;gene_biotype=protein_coding;locus_tag=AB25_RS21230;old_locus_tag=AB25_0694 NZ_JJMC01000008.1 Protein Homology CDS 4132 4839 . + 0 ID=cds-WP_001030930.1;Parent=gene-AB25_RS21230;Dbxref=GenBank:WP_001030930.1;Name=WP_001030930.1;gbkey=CDS;gene=ybeU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415181.1;locus_tag=AB25_RS21230;product=DUF1266 domain-containing protein;protein_id=WP_001030930.1;transl_table=11 NZ_JJMC01000008.1 RefSeq gene 4836 6287 . + . ID=gene-AB25_RS21225;Name=djlC;gbkey=Gene;gene=djlC;gene_biotype=protein_coding;locus_tag=AB25_RS21225;old_locus_tag=AB25_0695 NZ_JJMC01000008.1 Protein Homology CDS 4836 6287 . + 0 ID=cds-WP_001326405.1;Parent=gene-AB25_RS21225;Dbxref=GenBank:WP_001326405.1;Name=WP_001326405.1;gbkey=CDS;gene=djlC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706561.1;locus_tag=AB25_RS21225;product=co-chaperone DjlC;protein_id=WP_001326405.1;transl_table=11 NZ_JJMC01000008.1 RefSeq pseudogene 6347 8017 . - . ID=gene-AB25_RS0124580;Name=hscC;gbkey=Gene;gene=hscC;gene_biotype=pseudogene;locus_tag=AB25_RS0124580;old_locus_tag=AB25_0697;pseudo=true NZ_JJMC01000008.1 Protein Homology CDS 6347 8017 . - 0 ID=cds-AB25_RS0124580;Parent=gene-AB25_RS0124580;Note=internal stop;gbkey=CDS;gene=hscC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000367910.1;locus_tag=AB25_RS0124580;product=molecular chaperone HscC;pseudo=true;transl_table=11 NZ_JJMC01000008.1 RefSeq gene 8101 9036 . - . ID=gene-AB25_RS21220;Name=rihA;gbkey=Gene;gene=rihA;gene_biotype=protein_coding;locus_tag=AB25_RS21220;old_locus_tag=AB25_0698 NZ_JJMC01000008.1 Protein Homology CDS 8101 9036 . - 0 ID=cds-WP_001207503.1;Parent=gene-AB25_RS21220;Dbxref=GenBank:WP_001207503.1;Name=WP_001207503.1;Ontology_term=GO:0006206,GO:0050263;gbkey=CDS;gene=rihA;go_function=ribosylpyrimidine nucleosidase activity|0050263||IEA;go_process=pyrimidine nucleobase metabolic process|0006206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308717.1;locus_tag=AB25_RS21220;product=pyrimidine-specific ribonucleoside hydrolase RihA;protein_id=WP_001207503.1;transl_table=11 NZ_JJMC01000008.1 RefSeq gene 9154 9879 . - . ID=gene-AB25_RS21215;Name=gltL;gbkey=Gene;gene=gltL;gene_biotype=protein_coding;locus_tag=AB25_RS21215;old_locus_tag=AB25_0699 NZ_JJMC01000008.1 Protein Homology CDS 9154 9879 . - 0 ID=cds-WP_000631384.1;Parent=gene-AB25_RS21215;Dbxref=GenBank:WP_000631384.1;Name=WP_000631384.1;gbkey=CDS;gene=gltL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245804.1;locus_tag=AB25_RS21215;product=glutamate/aspartate ABC transporter ATP-binding protein GltL;protein_id=WP_000631384.1;transl_table=11 NZ_JJMC01000008.1 RefSeq gene 9879 10553 . - . ID=gene-AB25_RS21210;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;locus_tag=AB25_RS21210;old_locus_tag=AB25_0700 NZ_JJMC01000008.1 Protein Homology CDS 9879 10553 . - 0 ID=cds-WP_000272824.1;Parent=gene-AB25_RS21210;Dbxref=GenBank:WP_000272824.1;Name=WP_000272824.1;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308719.1;locus_tag=AB25_RS21210;product=glutamate/aspartate ABC transporter permease GltK;protein_id=WP_000272824.1;transl_table=11 NZ_JJMC01000008.1 RefSeq gene 10553 11293 . - . ID=gene-AB25_RS21205;Name=gltJ;gbkey=Gene;gene=gltJ;gene_biotype=protein_coding;locus_tag=AB25_RS21205;old_locus_tag=AB25_0701 NZ_JJMC01000008.1 Protein Homology CDS 10553 11293 . - 0 ID=cds-WP_000020941.1;Parent=gene-AB25_RS21205;Dbxref=GenBank:WP_000020941.1;Name=WP_000020941.1;gbkey=CDS;gene=gltJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415187.1;locus_tag=AB25_RS21205;product=glutamate/aspartate ABC transporter permease GltJ;protein_id=WP_000020941.1;transl_table=11 NZ_JJMC01000008.1 RefSeq gene 11463 12371 . - . ID=gene-AB25_RS21200;Name=gltI;gbkey=Gene;gene=gltI;gene_biotype=protein_coding;locus_tag=AB25_RS21200;old_locus_tag=AB25_0702 NZ_JJMC01000008.1 Protein Homology CDS 11463 12371 . - 0 ID=cds-WP_001297566.1;Parent=gene-AB25_RS21200;Dbxref=GenBank:WP_001297566.1;Name=WP_001297566.1;gbkey=CDS;gene=gltI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308721.1;locus_tag=AB25_RS21200;product=glutamate/aspartate ABC transporter substrate-binding protein GltI;protein_id=WP_001297566.1;transl_table=11 NZ_JJMC01000008.1 RefSeq gene 12826 14703 . + . ID=gene-AB25_RS21195;Name=AB25_RS21195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS21195;old_locus_tag=AB25_0704 NZ_JJMC01000008.1 Protein Homology CDS 12826 14703 . + 0 ID=cds-WP_001276717.1;Parent=gene-AB25_RS21195;Dbxref=GenBank:WP_001276717.1;Name=WP_001276717.1;Ontology_term=GO:0004252,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001276742.1;locus_tag=AB25_RS21195;product=rhomboid family intramembrane serine protease;protein_id=WP_001276717.1;transl_table=11 NZ_JJMC01000008.1 RefSeq gene 14781 16319 . - . ID=gene-AB25_RS21190;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=AB25_RS21190;old_locus_tag=AB25_0705 NZ_JJMC01000008.1 Protein Homology CDS 14781 16319 . - 0 ID=cds-WP_000853051.1;Parent=gene-AB25_RS21190;Dbxref=GenBank:WP_000853051.1;Name=WP_000853051.1;Ontology_term=GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415190.1;locus_tag=AB25_RS21190;product=apolipoprotein N-acyltransferase;protein_id=WP_000853051.1;transl_table=11 NZ_JJMC01000008.1 RefSeq gene 16344 17222 . - . ID=gene-AB25_RS21185;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=AB25_RS21185;old_locus_tag=AB25_0706 NZ_JJMC01000008.1 Protein Homology CDS 16344 17222 . - 0 ID=cds-WP_001278605.1;Parent=gene-AB25_RS21185;Dbxref=GenBank:WP_001278605.1;Name=WP_001278605.1;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.;Ontology_term=GO:0050660;gbkey=CDS;gene=corC;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308723.1;locus_tag=AB25_RS21185;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=WP_001278605.1;transl_table=11 NZ_JJMC01000008.1 RefSeq gene 17312 17779 . - . ID=gene-AB25_RS21180;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=AB25_RS21180;old_locus_tag=AB25_0707 NZ_JJMC01000008.1 Protein Homology CDS 17312 17779 . - 0 ID=cds-WP_000084473.1;Parent=gene-AB25_RS21180;Dbxref=GenBank:WP_000084473.1;Name=WP_000084473.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014169133.1;locus_tag=AB25_RS21180;product=rRNA maturation RNase YbeY;protein_id=WP_000084473.1;transl_table=11 NZ_JJMC01000008.1 RefSeq gene 17776 18816 . - . ID=gene-AB25_RS21175;Name=ybeZ;gbkey=Gene;gene=ybeZ;gene_biotype=protein_coding;locus_tag=AB25_RS21175;old_locus_tag=AB25_0708 NZ_JJMC01000008.1 Protein Homology CDS 17776 18816 . - 0 ID=cds-WP_032170609.1;Parent=gene-AB25_RS21175;Dbxref=GenBank:WP_032170609.1;Name=WP_032170609.1;Ontology_term=GO:0005524;gbkey=CDS;gene=ybeZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415193.2;locus_tag=AB25_RS21175;product=PhoH family protein;protein_id=WP_032170609.1;transl_table=11 NZ_JJMC01000008.1 RefSeq gene 18969 20393 . - . ID=gene-AB25_RS21170;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=AB25_RS21170;old_locus_tag=AB25_0710 NZ_JJMC01000008.1 Protein Homology CDS 18969 20393 . - 0 ID=cds-WP_000162740.1;Parent=gene-AB25_RS21170;Dbxref=GenBank:WP_000162740.1;Name=WP_000162740.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308726.1;locus_tag=AB25_RS21170;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_000162740.1;transl_table=11 NZ_JJMC01000008.1 RefSeq gene 20539 21714 . + . ID=gene-AB25_RS21165;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=AB25_RS21165;old_locus_tag=AB25_0711 NZ_JJMC01000008.1 Protein Homology CDS 20539 21714 . + 0 ID=cds-WP_000184648.1;Parent=gene-AB25_RS21165;Dbxref=GenBank:WP_000184648.1;Name=WP_000184648.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiF;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415195.1;locus_tag=AB25_RS21165;product=3-demethoxyubiquinol 3-hydroxylase;protein_id=WP_000184648.1;transl_table=11 NZ_JJMC01000008.1 RefSeq gene 21868 21942 . - . ID=gene-AB25_RS21160;Name=AB25_RS21160;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS21160;old_locus_tag=AB25_0712 NZ_JJMC01000008.1 tRNAscan-SE tRNA 21868 21942 . - . ID=rna-AB25_RS21160;Parent=gene-AB25_RS21160;anticodon=(pos:complement(21908..21910));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21160;product=tRNA-Gln NZ_JJMC01000008.1 tRNAscan-SE exon 21868 21942 . - . ID=exon-AB25_RS21160-1;Parent=rna-AB25_RS21160;anticodon=(pos:complement(21908..21910));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21160;product=tRNA-Gln NZ_JJMC01000008.1 RefSeq gene 21980 22054 . - . ID=gene-AB25_RS21155;Name=AB25_RS21155;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS21155;old_locus_tag=AB25_0713 NZ_JJMC01000008.1 tRNAscan-SE tRNA 21980 22054 . - . ID=rna-AB25_RS21155;Parent=gene-AB25_RS21155;anticodon=(pos:complement(22020..22022));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21155;product=tRNA-Gln NZ_JJMC01000008.1 tRNAscan-SE exon 21980 22054 . - . ID=exon-AB25_RS21155-1;Parent=rna-AB25_RS21155;anticodon=(pos:complement(22020..22022));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21155;product=tRNA-Gln NZ_JJMC01000008.1 RefSeq gene 22092 22166 . - . ID=gene-AB25_RS21150;Name=AB25_RS21150;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS21150;old_locus_tag=AB25_0714 NZ_JJMC01000008.1 tRNAscan-SE tRNA 22092 22166 . - . ID=rna-AB25_RS21150;Parent=gene-AB25_RS21150;anticodon=(pos:complement(22132..22134));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21150;product=tRNA-Gln NZ_JJMC01000008.1 tRNAscan-SE exon 22092 22166 . - . ID=exon-AB25_RS21150-1;Parent=rna-AB25_RS21150;anticodon=(pos:complement(22132..22134));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21150;product=tRNA-Gln NZ_JJMC01000008.1 RefSeq gene 22204 22278 . - . ID=gene-AB25_RS21145;Name=AB25_RS21145;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS21145;old_locus_tag=AB25_0715 NZ_JJMC01000008.1 tRNAscan-SE tRNA 22204 22278 . - . ID=rna-AB25_RS21145;Parent=gene-AB25_RS21145;anticodon=(pos:complement(22244..22246));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21145;product=tRNA-Gln NZ_JJMC01000008.1 tRNAscan-SE exon 22204 22278 . - . ID=exon-AB25_RS21145-1;Parent=rna-AB25_RS21145;anticodon=(pos:complement(22244..22246));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21145;product=tRNA-Gln NZ_JJMC01000008.1 RefSeq gene 22327 22403 . - . ID=gene-AB25_RS21140;Name=AB25_RS21140;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS21140;old_locus_tag=AB25_0716 NZ_JJMC01000008.1 tRNAscan-SE tRNA 22327 22403 . - . ID=rna-AB25_RS21140;Parent=gene-AB25_RS21140;anticodon=(pos:complement(22367..22369));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21140;product=tRNA-Met NZ_JJMC01000008.1 tRNAscan-SE exon 22327 22403 . - . ID=exon-AB25_RS21140-1;Parent=rna-AB25_RS21140;anticodon=(pos:complement(22367..22369));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21140;product=tRNA-Met NZ_JJMC01000008.1 RefSeq gene 22419 22493 . - . ID=gene-AB25_RS21135;Name=AB25_RS21135;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS21135;old_locus_tag=AB25_0718 NZ_JJMC01000008.1 tRNAscan-SE tRNA 22419 22493 . - . ID=rna-AB25_RS21135;Parent=gene-AB25_RS21135;anticodon=(pos:complement(22459..22461));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21135;product=tRNA-Gln NZ_JJMC01000008.1 tRNAscan-SE exon 22419 22493 . - . ID=exon-AB25_RS21135-1;Parent=rna-AB25_RS21135;anticodon=(pos:complement(22459..22461));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21135;product=tRNA-Gln ##sequence-region NZ_JJMC01000009.1 1 1680 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000009.1 RefSeq region 1 1680 . + . ID=NZ_JJMC01000009.1:1..1680;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000009.1 RefSeq gene 3 74 . - . ID=gene-AB25_RS21130;Name=AB25_RS21130;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS21130;old_locus_tag=AB25_0719 NZ_JJMC01000009.1 tRNAscan-SE tRNA 3 74 . - . ID=rna-AB25_RS21130;Parent=gene-AB25_RS21130;anticodon=(pos:complement(40..42));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21130;product=tRNA-Gln NZ_JJMC01000009.1 tRNAscan-SE exon 3 74 . - . ID=exon-AB25_RS21130-1;Parent=rna-AB25_RS21130;anticodon=(pos:complement(40..42));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21130;product=tRNA-Gln NZ_JJMC01000009.1 RefSeq gene 112 186 . - . ID=gene-AB25_RS21125;Name=AB25_RS21125;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS21125;old_locus_tag=AB25_0720 NZ_JJMC01000009.1 tRNAscan-SE tRNA 112 186 . - . ID=rna-AB25_RS21125;Parent=gene-AB25_RS21125;anticodon=(pos:complement(152..154));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21125;product=tRNA-Gln NZ_JJMC01000009.1 tRNAscan-SE exon 112 186 . - . ID=exon-AB25_RS21125-1;Parent=rna-AB25_RS21125;anticodon=(pos:complement(152..154));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21125;product=tRNA-Gln NZ_JJMC01000009.1 RefSeq gene 235 311 . - . ID=gene-AB25_RS21120;Name=AB25_RS21120;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS21120;old_locus_tag=AB25_0721 NZ_JJMC01000009.1 tRNAscan-SE tRNA 235 311 . - . ID=rna-AB25_RS21120;Parent=gene-AB25_RS21120;anticodon=(pos:complement(275..277));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21120;product=tRNA-Met NZ_JJMC01000009.1 tRNAscan-SE exon 235 311 . - . ID=exon-AB25_RS21120-1;Parent=rna-AB25_RS21120;anticodon=(pos:complement(275..277));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21120;product=tRNA-Met NZ_JJMC01000009.1 RefSeq gene 327 401 . - . ID=gene-AB25_RS21115;Name=AB25_RS21115;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS21115;old_locus_tag=AB25_0722 NZ_JJMC01000009.1 tRNAscan-SE tRNA 327 401 . - . ID=rna-AB25_RS21115;Parent=gene-AB25_RS21115;anticodon=(pos:complement(367..369));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21115;product=tRNA-Gln NZ_JJMC01000009.1 tRNAscan-SE exon 327 401 . - . ID=exon-AB25_RS21115-1;Parent=rna-AB25_RS21115;anticodon=(pos:complement(367..369));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21115;product=tRNA-Gln NZ_JJMC01000009.1 RefSeq gene 436 510 . - . ID=gene-AB25_RS21110;Name=AB25_RS21110;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS21110;old_locus_tag=AB25_0723 NZ_JJMC01000009.1 tRNAscan-SE tRNA 436 510 . - . ID=rna-AB25_RS21110;Parent=gene-AB25_RS21110;anticodon=(pos:complement(476..478));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21110;product=tRNA-Gln NZ_JJMC01000009.1 tRNAscan-SE exon 436 510 . - . ID=exon-AB25_RS21110-1;Parent=rna-AB25_RS21110;anticodon=(pos:complement(476..478));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21110;product=tRNA-Gln NZ_JJMC01000009.1 RefSeq gene 545 619 . - . ID=gene-AB25_RS21105;Name=AB25_RS21105;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS21105;old_locus_tag=AB25_0724 NZ_JJMC01000009.1 tRNAscan-SE tRNA 545 619 . - . ID=rna-AB25_RS21105;Parent=gene-AB25_RS21105;anticodon=(pos:complement(585..587));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21105;product=tRNA-Gln NZ_JJMC01000009.1 tRNAscan-SE exon 545 619 . - . ID=exon-AB25_RS21105-1;Parent=rna-AB25_RS21105;anticodon=(pos:complement(585..587));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21105;product=tRNA-Gln NZ_JJMC01000009.1 RefSeq gene 654 728 . - . ID=gene-AB25_RS21100;Name=AB25_RS21100;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS21100;old_locus_tag=AB25_0725 NZ_JJMC01000009.1 tRNAscan-SE tRNA 654 728 . - . ID=rna-AB25_RS21100;Parent=gene-AB25_RS21100;anticodon=(pos:complement(694..696));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21100;product=tRNA-Gln NZ_JJMC01000009.1 tRNAscan-SE exon 654 728 . - . ID=exon-AB25_RS21100-1;Parent=rna-AB25_RS21100;anticodon=(pos:complement(694..696));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21100;product=tRNA-Gln NZ_JJMC01000009.1 RefSeq gene 752 836 . - . ID=gene-AB25_RS21095;Name=AB25_RS21095;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS21095;old_locus_tag=AB25_0726 NZ_JJMC01000009.1 tRNAscan-SE tRNA 752 836 . - . ID=rna-AB25_RS21095;Parent=gene-AB25_RS21095;anticodon=(pos:complement(800..802));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21095;product=tRNA-Leu NZ_JJMC01000009.1 tRNAscan-SE exon 752 836 . - . ID=exon-AB25_RS21095-1;Parent=rna-AB25_RS21095;anticodon=(pos:complement(800..802));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21095;product=tRNA-Leu NZ_JJMC01000009.1 RefSeq gene 845 921 . - . ID=gene-AB25_RS21090;Name=AB25_RS21090;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS21090;old_locus_tag=AB25_0727 NZ_JJMC01000009.1 tRNAscan-SE tRNA 845 921 . - . ID=rna-AB25_RS21090;Parent=gene-AB25_RS21090;anticodon=(pos:complement(885..887));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21090;product=tRNA-Met NZ_JJMC01000009.1 tRNAscan-SE exon 845 921 . - . ID=exon-AB25_RS21090-1;Parent=rna-AB25_RS21090;anticodon=(pos:complement(885..887));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21090;product=tRNA-Met NZ_JJMC01000009.1 RefSeq gene 1300 1680 . - . ID=gene-AB25_RS21085;Name=AB25_RS21085;end_range=1680,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS21085;old_locus_tag=AB25_0728;partial=true NZ_JJMC01000009.1 Protein Homology CDS 1300 1680 . - 0 ID=cds-WP_032295854.1;Parent=gene-AB25_RS21085;Dbxref=GenBank:WP_032295854.1;Name=WP_032295854.1;Ontology_term=GO:0006529,GO:0004066;end_range=1680,.;gbkey=CDS;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=AB25_RS21085;partial=true;product=asparagine synthase-related protein;protein_id=WP_032295854.1;transl_table=11 ##sequence-region NZ_JJMC01000010.1 1 1491 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000010.1 RefSeq region 1 1491 . + . ID=NZ_JJMC01000010.1:1..1491;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000010.1 RefSeq gene 90 166 . - . ID=gene-AB25_RS21080;Name=AB25_RS21080;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS21080;old_locus_tag=AB25_0729 NZ_JJMC01000010.1 tRNAscan-SE tRNA 90 166 . - . ID=rna-AB25_RS21080;Parent=gene-AB25_RS21080;anticodon=(pos:complement(130..132));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21080;product=tRNA-Met NZ_JJMC01000010.1 tRNAscan-SE exon 90 166 . - . ID=exon-AB25_RS21080-1;Parent=rna-AB25_RS21080;anticodon=(pos:complement(130..132));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21080;product=tRNA-Met NZ_JJMC01000010.1 RefSeq gene 182 256 . - . ID=gene-AB25_RS21075;Name=AB25_RS21075;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS21075;old_locus_tag=AB25_0730 NZ_JJMC01000010.1 tRNAscan-SE tRNA 182 256 . - . ID=rna-AB25_RS21075;Parent=gene-AB25_RS21075;anticodon=(pos:complement(222..224));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21075;product=tRNA-Gln NZ_JJMC01000010.1 tRNAscan-SE exon 182 256 . - . ID=exon-AB25_RS21075-1;Parent=rna-AB25_RS21075;anticodon=(pos:complement(222..224));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21075;product=tRNA-Gln NZ_JJMC01000010.1 RefSeq gene 280 364 . - . ID=gene-AB25_RS21070;Name=AB25_RS21070;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS21070;old_locus_tag=AB25_0731 NZ_JJMC01000010.1 tRNAscan-SE tRNA 280 364 . - . ID=rna-AB25_RS21070;Parent=gene-AB25_RS21070;anticodon=(pos:complement(328..330));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21070;product=tRNA-Leu NZ_JJMC01000010.1 tRNAscan-SE exon 280 364 . - . ID=exon-AB25_RS21070-1;Parent=rna-AB25_RS21070;anticodon=(pos:complement(328..330));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21070;product=tRNA-Leu NZ_JJMC01000010.1 RefSeq gene 373 449 . - . ID=gene-AB25_RS21065;Name=AB25_RS21065;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS21065;old_locus_tag=AB25_0732 NZ_JJMC01000010.1 tRNAscan-SE tRNA 373 449 . - . ID=rna-AB25_RS21065;Parent=gene-AB25_RS21065;anticodon=(pos:complement(413..415));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21065;product=tRNA-Met NZ_JJMC01000010.1 tRNAscan-SE exon 373 449 . - . ID=exon-AB25_RS21065-1;Parent=rna-AB25_RS21065;anticodon=(pos:complement(413..415));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21065;product=tRNA-Met NZ_JJMC01000010.1 RefSeq gene 465 539 . - . ID=gene-AB25_RS21060;Name=AB25_RS21060;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS21060;old_locus_tag=AB25_0733 NZ_JJMC01000010.1 tRNAscan-SE tRNA 465 539 . - . ID=rna-AB25_RS21060;Parent=gene-AB25_RS21060;anticodon=(pos:complement(505..507));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21060;product=tRNA-Gln NZ_JJMC01000010.1 tRNAscan-SE exon 465 539 . - . ID=exon-AB25_RS21060-1;Parent=rna-AB25_RS21060;anticodon=(pos:complement(505..507));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21060;product=tRNA-Gln NZ_JJMC01000010.1 RefSeq gene 563 647 . - . ID=gene-AB25_RS21055;Name=AB25_RS21055;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS21055;old_locus_tag=AB25_0734 NZ_JJMC01000010.1 tRNAscan-SE tRNA 563 647 . - . ID=rna-AB25_RS21055;Parent=gene-AB25_RS21055;anticodon=(pos:complement(611..613));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21055;product=tRNA-Leu NZ_JJMC01000010.1 tRNAscan-SE exon 563 647 . - . ID=exon-AB25_RS21055-1;Parent=rna-AB25_RS21055;anticodon=(pos:complement(611..613));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21055;product=tRNA-Leu NZ_JJMC01000010.1 RefSeq gene 656 732 . - . ID=gene-AB25_RS21050;Name=AB25_RS21050;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS21050;old_locus_tag=AB25_0735 NZ_JJMC01000010.1 tRNAscan-SE tRNA 656 732 . - . ID=rna-AB25_RS21050;Parent=gene-AB25_RS21050;anticodon=(pos:complement(696..698));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21050;product=tRNA-Met NZ_JJMC01000010.1 tRNAscan-SE exon 656 732 . - . ID=exon-AB25_RS21050-1;Parent=rna-AB25_RS21050;anticodon=(pos:complement(696..698));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS21050;product=tRNA-Met NZ_JJMC01000010.1 RefSeq gene 1111 1491 . - . ID=gene-AB25_RS21045;Name=AB25_RS21045;end_range=1491,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS21045;old_locus_tag=AB25_0736;partial=true NZ_JJMC01000010.1 Protein Homology CDS 1111 1491 . - 0 ID=cds-WP_032295854.1-2;Parent=gene-AB25_RS21045;Dbxref=GenBank:WP_032295854.1;Name=WP_032295854.1;Ontology_term=GO:0006529,GO:0004066;end_range=1491,.;gbkey=CDS;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=AB25_RS21045;partial=true;product=asparagine synthase-related protein;protein_id=WP_032295854.1;transl_table=11 ##sequence-region NZ_JJMC01000011.1 1 31219 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000011.1 RefSeq region 1 31219 . + . ID=NZ_JJMC01000011.1:1..31219;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000011.1 RefSeq gene 427 2091 . - . ID=gene-AB25_RS21040;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=AB25_RS21040;old_locus_tag=AB25_0738 NZ_JJMC01000011.1 Protein Homology CDS 427 2091 . - 0 ID=cds-WP_032170614.1;Parent=gene-AB25_RS21040;Dbxref=GenBank:WP_032170614.1;Name=WP_032170614.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=AB25_RS21040;product=asparagine synthase B;protein_id=WP_032170614.1;transl_table=11 NZ_JJMC01000011.1 RefSeq gene 2488 3240 . - . ID=gene-AB25_RS21035;Name=nagD;gbkey=Gene;gene=nagD;gene_biotype=protein_coding;locus_tag=AB25_RS21035;old_locus_tag=AB25_0740 NZ_JJMC01000011.1 Protein Homology CDS 2488 3240 . - 0 ID=cds-WP_000153129.1;Parent=gene-AB25_RS21035;Dbxref=GenBank:WP_000153129.1;Name=WP_000153129.1;gbkey=CDS;gene=nagD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308732.1;locus_tag=AB25_RS21035;product=ribonucleotide monophosphatase NagD;protein_id=WP_000153129.1;transl_table=11 NZ_JJMC01000011.1 RefSeq gene 3288 4508 . - . ID=gene-AB25_RS21030;Name=nagC;gbkey=Gene;gene=nagC;gene_biotype=protein_coding;gene_synonym=nagR;locus_tag=AB25_RS21030;old_locus_tag=AB25_0741 NZ_JJMC01000011.1 Protein Homology CDS 3288 4508 . - 0 ID=cds-WP_000187594.1;Parent=gene-AB25_RS21030;Dbxref=GenBank:WP_000187594.1;Name=WP_000187594.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=nagC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308733.1;locus_tag=AB25_RS21030;product=DNA-binding transcriptional regulator NagC;protein_id=WP_000187594.1;transl_table=11 NZ_JJMC01000011.1 RefSeq gene 4517 5665 . - . ID=gene-AB25_RS21025;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=AB25_RS21025;old_locus_tag=AB25_0742 NZ_JJMC01000011.1 Protein Homology CDS 4517 5665 . - 0 ID=cds-WP_000271153.1;Parent=gene-AB25_RS21025;Dbxref=GenBank:WP_000271153.1;Name=WP_000271153.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308734.1;locus_tag=AB25_RS21025;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_000271153.1;transl_table=11 NZ_JJMC01000011.1 RefSeq gene 5725 6525 . - . ID=gene-AB25_RS21020;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=AB25_RS21020;old_locus_tag=AB25_0743 NZ_JJMC01000011.1 Protein Homology CDS 5725 6525 . - 0 ID=cds-WP_001237072.1;Parent=gene-AB25_RS21020;Dbxref=GenBank:WP_001237072.1;Name=WP_001237072.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805656.1;locus_tag=AB25_RS21020;product=glucosamine-6-phosphate deaminase;protein_id=WP_001237072.1;transl_table=11 NZ_JJMC01000011.1 RefSeq gene 6858 8804 . + . ID=gene-AB25_RS21015;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=AB25_RS21015;old_locus_tag=AB25_0745 NZ_JJMC01000011.1 Protein Homology CDS 6858 8804 . + 0 ID=cds-WP_032173383.1;Parent=gene-AB25_RS21015;Dbxref=GenBank:WP_032173383.1;Name=WP_032173383.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308736.1;locus_tag=AB25_RS21015;product=PTS N-acetyl glucosamine transporter subunit IIABC;protein_id=WP_032173383.1;transl_table=11 NZ_JJMC01000011.1 RefSeq gene 9072 10736 . + . ID=gene-AB25_RS21010;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=AB25_RS21010;old_locus_tag=AB25_0747 NZ_JJMC01000011.1 Protein Homology CDS 9072 10736 . + 0 ID=cds-WP_001287154.1;Parent=gene-AB25_RS21010;Dbxref=GenBank:WP_001287154.1;Name=WP_001287154.1;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524,GO:0005737;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415206.1;locus_tag=AB25_RS21010;product=glutamine--tRNA ligase;protein_id=WP_001287154.1;transl_table=11 NZ_JJMC01000011.1 RefSeq gene 11316 12722 . + . ID=gene-AB25_RS21005;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=AB25_RS21005;old_locus_tag=AB25_0748 NZ_JJMC01000011.1 Protein Homology CDS 11316 12722 . + 0 ID=cds-WP_001258839.1;Parent=gene-AB25_RS21005;Dbxref=GenBank:WP_001258839.1;Name=WP_001258839.1;Ontology_term=GO:0015774,GO:0052778,GO:0015288;gbkey=CDS;gene=chiP;go_function=porin activity|0015288||IEA;go_process=polysaccharide transport|0015774||IEA,diacetylchitobiose metabolic process|0052778||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415207.1;locus_tag=AB25_RS21005;product=chitoporin ChiP;protein_id=WP_001258839.1;transl_table=11 NZ_JJMC01000011.1 RefSeq gene 12772 13098 . + . ID=gene-AB25_RS21000;Name=chiQ;gbkey=Gene;gene=chiQ;gene_biotype=protein_coding;locus_tag=AB25_RS21000;old_locus_tag=AB25_0749 NZ_JJMC01000011.1 Protein Homology CDS 12772 13098 . + 0 ID=cds-WP_000733588.1;Parent=gene-AB25_RS21000;Dbxref=GenBank:WP_000733588.1;Name=WP_000733588.1;gbkey=CDS;gene=chiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308740.1;locus_tag=AB25_RS21000;product=ChiQ/YbfN family lipoprotein;protein_id=WP_000733588.1;transl_table=11 NZ_JJMC01000011.1 RefSeq gene 13183 13629 . - . ID=gene-AB25_RS20995;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=AB25_RS20995;old_locus_tag=AB25_0750 NZ_JJMC01000011.1 Protein Homology CDS 13183 13629 . - 0 ID=cds-WP_000131702.1;Parent=gene-AB25_RS20995;Dbxref=GenBank:WP_000131702.1;Name=WP_000131702.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308741.1;locus_tag=AB25_RS20995;product=ferric iron uptake transcriptional regulator;protein_id=WP_000131702.1;transl_table=11 NZ_JJMC01000011.1 RefSeq gene 13622 13708 . - . ID=gene-AB25_RS0124590;Name=uof;gbkey=Gene;gene=uof;gene_biotype=protein_coding;locus_tag=AB25_RS0124590 NZ_JJMC01000011.1 Protein Homology CDS 13622 13708 . - 0 ID=cds-WP_001406816.1;Parent=gene-AB25_RS0124590;Dbxref=GenBank:WP_001406816.1;Name=WP_001406816.1;gbkey=CDS;gene=uof;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001491546.1;locus_tag=AB25_RS0124590;product=fur leader peptide;protein_id=WP_001406816.1;transl_table=11 NZ_JJMC01000011.1 RefSeq gene 13918 14448 . - . ID=gene-AB25_RS20990;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=AB25_RS20990;old_locus_tag=AB25_0751 NZ_JJMC01000011.1 Protein Homology CDS 13918 14448 . - 0 ID=cds-WP_001018618.1;Parent=gene-AB25_RS20990;Dbxref=GenBank:WP_001018618.1;Name=WP_001018618.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308742.1;locus_tag=AB25_RS20990;product=flavodoxin FldA;protein_id=WP_001018618.1;transl_table=11 NZ_JJMC01000011.1 RefSeq gene 14588 14881 . - . ID=gene-AB25_RS20985;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;locus_tag=AB25_RS20985;old_locus_tag=AB25_0752 NZ_JJMC01000011.1 Protein Homology CDS 14588 14881 . - 0 ID=cds-WP_001300829.1;Parent=gene-AB25_RS20985;Dbxref=GenBank:WP_001300829.1;Name=WP_001300829.1;gbkey=CDS;gene=ybfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415211.2;locus_tag=AB25_RS20985;product=LexA regulated protein;protein_id=WP_001300829.1;transl_table=11 NZ_JJMC01000011.1 RefSeq gene 15021 15785 . - . ID=gene-AB25_RS20980;Name=ybfF;gbkey=Gene;gene=ybfF;gene_biotype=protein_coding;locus_tag=AB25_RS20980;old_locus_tag=AB25_0753 NZ_JJMC01000011.1 Protein Homology CDS 15021 15785 . - 0 ID=cds-WP_000773301.1;Parent=gene-AB25_RS20980;Dbxref=GenBank:WP_000773301.1;Name=WP_000773301.1;gbkey=CDS;gene=ybfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706538.1;locus_tag=AB25_RS20980;product=esterase;protein_id=WP_000773301.1;transl_table=11 NZ_JJMC01000011.1 RefSeq gene 15970 16515 . + . ID=gene-AB25_RS20975;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=AB25_RS20975;old_locus_tag=AB25_0754 NZ_JJMC01000011.1 Protein Homology CDS 15970 16515 . + 0 ID=cds-WP_000848387.1;Parent=gene-AB25_RS20975;Dbxref=GenBank:WP_000848387.1;Name=WP_000848387.1;Ontology_term=GO:0032297,GO:0003677;gbkey=CDS;gene=seqA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415213.1;locus_tag=AB25_RS20975;product=replication initiation negative regulator SeqA;protein_id=WP_000848387.1;transl_table=11 NZ_JJMC01000011.1 RefSeq gene 16541 18181 . + . ID=gene-AB25_RS20970;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=AB25_RS20970;old_locus_tag=AB25_0755 NZ_JJMC01000011.1 Protein Homology CDS 16541 18181 . + 0 ID=cds-WP_000974363.1;Parent=gene-AB25_RS20970;Dbxref=GenBank:WP_000974363.1;Name=WP_000974363.1;Ontology_term=GO:0005975,GO:0004614;gbkey=CDS;gene=pgm;go_function=phosphoglucomutase activity|0004614||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308746.1;locus_tag=AB25_RS20970;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);protein_id=WP_000974363.1;transl_table=11 NZ_JJMC01000011.1 RefSeq gene 18237 19556 . - . ID=gene-AB25_RS20965;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=AB25_RS20965;old_locus_tag=AB25_0756 NZ_JJMC01000011.1 Protein Homology CDS 18237 19556 . - 0 ID=cds-WP_000075845.1;Parent=gene-AB25_RS20965;Dbxref=GenBank:WP_000075845.1;Name=WP_000075845.1;Ontology_term=GO:0015822,GO:0015847,GO:0055085,GO:0015496,GO:0016020;gbkey=CDS;gene=potE;go_component=membrane|0016020||IEA;go_function=putrescine:ornithine antiporter activity|0015496||IEA;go_process=ornithine transport|0015822||IEA,putrescine transport|0015847||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415219.1;locus_tag=AB25_RS20965;product=putrescine-ornithine antiporter;protein_id=WP_000075845.1;transl_table=11 NZ_JJMC01000011.1 RefSeq gene 19553 21751 . - . ID=gene-AB25_RS20960;Name=speF;gbkey=Gene;gene=speF;gene_biotype=protein_coding;locus_tag=AB25_RS20960;old_locus_tag=AB25_0757 NZ_JJMC01000011.1 Protein Homology CDS 19553 21751 . - 0 ID=cds-WP_001372249.1;Parent=gene-AB25_RS20960;Dbxref=GenBank:WP_001372249.1;Name=WP_001372249.1;Ontology_term=GO:0006520,GO:0004586;gbkey=CDS;gene=speF;go_function=ornithine decarboxylase activity|0004586||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308748.1;locus_tag=AB25_RS20960;product=ornithine decarboxylase SpeF;protein_id=WP_001372249.1;transl_table=11 NZ_JJMC01000011.1 RefSeq gene 22062 22166 . - . ID=gene-AB25_RS30985;Name=speFL;gbkey=Gene;gene=speFL;gene_biotype=protein_coding;locus_tag=AB25_RS30985 NZ_JJMC01000011.1 Protein Homology CDS 22062 22166 . - 0 ID=cds-WP_001312672.1;Parent=gene-AB25_RS30985;Dbxref=GenBank:WP_001312672.1;Name=WP_001312672.1;gbkey=CDS;gene=speFL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051176.1;locus_tag=AB25_RS30985;product=leader peptide SpeFL;protein_id=WP_001312672.1;transl_table=11 NZ_JJMC01000011.1 RefSeq gene 22145 22279 . - . ID=gene-AB25_RS32805;Name=AB25_RS32805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32805 NZ_JJMC01000011.1 Protein Homology CDS 22145 22279 . - 0 ID=cds-WP_001299172.1;Parent=gene-AB25_RS32805;Dbxref=GenBank:WP_001299172.1;Name=WP_001299172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001417766.1;locus_tag=AB25_RS32805;product=hypothetical protein;protein_id=WP_001299172.1;transl_table=11 NZ_JJMC01000011.1 RefSeq gene 22441 23118 . - . ID=gene-AB25_RS20950;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=AB25_RS20950;old_locus_tag=AB25_0759 NZ_JJMC01000011.1 Protein Homology CDS 22441 23118 . - 0 ID=cds-WP_032170615.1;Parent=gene-AB25_RS20950;Dbxref=GenBank:WP_032170615.1;Name=WP_032170615.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=kdpE;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459687.1;locus_tag=AB25_RS20950;product=two-component system response regulator KdpE;protein_id=WP_032170615.1;transl_table=11 NZ_JJMC01000011.1 RefSeq gene 23115 25799 . - . ID=gene-AB25_RS20945;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=protein_coding;locus_tag=AB25_RS20945;old_locus_tag=AB25_0760 NZ_JJMC01000011.1 Protein Homology CDS 23115 25799 . - 0 ID=cds-WP_001324644.1;Parent=gene-AB25_RS20945;Dbxref=GenBank:WP_001324644.1;Name=WP_001324644.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=kdpD;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308750.1;locus_tag=AB25_RS20945;product=two-component system sensor histidine kinase KdpD;protein_id=WP_001324644.1;transl_table=11 NZ_JJMC01000011.1 RefSeq gene 25792 26364 . - . ID=gene-AB25_RS20940;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=AB25_RS20940;old_locus_tag=AB25_0761 NZ_JJMC01000011.1 Protein Homology CDS 25792 26364 . - 0 ID=cds-WP_001324645.1;Parent=gene-AB25_RS20940;Dbxref=GenBank:WP_001324645.1;Name=WP_001324645.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpC;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415224.1;locus_tag=AB25_RS20940;product=K(+)-transporting ATPase subunit C;protein_id=WP_001324645.1;transl_table=11 NZ_JJMC01000011.1 RefSeq gene 26373 28421 . - . ID=gene-AB25_RS20935;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=AB25_RS20935;old_locus_tag=AB25_0762 NZ_JJMC01000011.1 Protein Homology CDS 26373 28421 . - 0 ID=cds-WP_000087966.1;Parent=gene-AB25_RS20935;Dbxref=GenBank:WP_000087966.1;Name=WP_000087966.1;Ontology_term=GO:0006813,GO:0005524,GO:0008556,GO:0016020,GO:0031004;gbkey=CDS;gene=kdpB;go_component=membrane|0016020||IEA,potassium ion-transporting ATPase complex|0031004||IEA;go_function=ATP binding|0005524||IEA,P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415225.1;locus_tag=AB25_RS20935;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_000087966.1;transl_table=11 NZ_JJMC01000011.1 RefSeq gene 28444 30117 . - . ID=gene-AB25_RS20930;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=AB25_RS20930;old_locus_tag=AB25_0763 NZ_JJMC01000011.1 Protein Homology CDS 28444 30117 . - 0 ID=cds-WP_000741137.1;Parent=gene-AB25_RS20930;Dbxref=GenBank:WP_000741137.1;Name=WP_000741137.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415226.1;locus_tag=AB25_RS20930;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_000741137.1;transl_table=11 NZ_JJMC01000011.1 RefSeq gene 30117 30206 . - . ID=gene-AB25_RS0124600;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=AB25_RS0124600 NZ_JJMC01000011.1 Protein Homology CDS 30117 30206 . - 0 ID=cds-WP_001272653.1;Parent=gene-AB25_RS0124600;Dbxref=GenBank:WP_001272653.1;Name=WP_001272653.1;gbkey=CDS;gene=kdpF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588443.1;locus_tag=AB25_RS0124600;product=K(+)-transporting ATPase subunit F;protein_id=WP_001272653.1;transl_table=11 NZ_JJMC01000011.1 RefSeq gene 30519 30725 . + . ID=gene-AB25_RS20925;Name=ybfA;gbkey=Gene;gene=ybfA;gene_biotype=protein_coding;locus_tag=AB25_RS20925;old_locus_tag=AB25_0765 NZ_JJMC01000011.1 Protein Homology CDS 30519 30725 . + 0 ID=cds-WP_000424924.1;Parent=gene-AB25_RS20925;Dbxref=GenBank:WP_000424924.1;Name=WP_000424924.1;gbkey=CDS;gene=ybfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308755.1;locus_tag=AB25_RS20925;product=YbfA family protein;protein_id=WP_000424924.1;transl_table=11 NZ_JJMC01000011.1 RefSeq gene 30968 31219 . + . ID=gene-AB25_RS20920;Name=AB25_RS20920;end_range=31219,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS20920;old_locus_tag=AB25_0766;partial=true NZ_JJMC01000011.1 Protein Homology CDS 30968 31219 . + 0 ID=cds-WP_027661981.1;Parent=gene-AB25_RS20920;Dbxref=GenBank:WP_027661981.1;Name=WP_027661981.1;end_range=31219,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418050.1;locus_tag=AB25_RS20920;partial=true;product=DUF6531 domain-containing protein;protein_id=WP_027661981.1;transl_table=11 ##sequence-region NZ_JJMC01000012.1 1 2810 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000012.1 RefSeq region 1 2810 . + . ID=NZ_JJMC01000012.1:1..2810;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000012.1 RefSeq gene 1 717 . + . ID=gene-AB25_RS20915;Name=AB25_RS20915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS20915;old_locus_tag=AB25_0767;partial=true;start_range=.,1 NZ_JJMC01000012.1 Protein Homology CDS 1 717 . + 0 ID=cds-WP_032170617.1;Parent=gene-AB25_RS20915;Dbxref=GenBank:WP_032170617.1;Name=WP_032170617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308756.1;locus_tag=AB25_RS20915;partial=true;product=RHS repeat-associated core domain-containing protein;protein_id=WP_032170617.1;start_range=.,1;transl_table=11 NZ_JJMC01000012.1 RefSeq gene 714 1283 . + . ID=gene-AB25_RS20910;Name=ybfC;gbkey=Gene;gene=ybfC;gene_biotype=protein_coding;locus_tag=AB25_RS20910;old_locus_tag=AB25_0768 NZ_JJMC01000012.1 Protein Homology CDS 714 1283 . + 0 ID=cds-WP_000832338.1;Parent=gene-AB25_RS20910;Dbxref=GenBank:WP_000832338.1;Name=WP_000832338.1;gbkey=CDS;gene=ybfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415232.1;locus_tag=AB25_RS20910;product=protein YbfC;protein_id=WP_000832338.1;transl_table=11 NZ_JJMC01000012.1 RefSeq pseudogene 1509 1745 . + . ID=gene-AB25_RS20905;Name=ybfQ;end_range=1745,.;gbkey=Gene;gene=ybfQ;gene_biotype=pseudogene;locus_tag=AB25_RS20905;old_locus_tag=AB25_0769;partial=true;pseudo=true NZ_JJMC01000012.1 Protein Homology CDS 1509 1745 . + 0 ID=cds-AB25_RS20905;Parent=gene-AB25_RS20905;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1745,.;gbkey=CDS;gene=ybfQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AB25_RS20905;partial=true;product=ISAs1 family transposase;pseudo=true;transl_table=11 NZ_JJMC01000012.1 RefSeq pseudogene 1889 2810 . + . ID=gene-AB25_RS20900;Name=AB25_RS20900;end_range=2810,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS20900;old_locus_tag=AB25_0770;partial=true;pseudo=true NZ_JJMC01000012.1 Protein Homology CDS 1889 2810 . + 0 ID=cds-AB25_RS20900;Parent=gene-AB25_RS20900;Note=internal stop%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;end_range=2810,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AB25_RS20900;partial=true;product=ISAs1 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJMC01000013.1 1 43295 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000013.1 RefSeq region 1 43295 . + . ID=NZ_JJMC01000013.1:1..43295;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000013.1 RefSeq pseudogene 13 1149 . + . ID=gene-AB25_RS20895;Name=AB25_RS20895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS20895;old_locus_tag=AB25_0771;pseudo=true NZ_JJMC01000013.1 Protein Homology CDS 13 1149 . + 0 ID=cds-AB25_RS20895;Parent=gene-AB25_RS20895;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AB25_RS20895;product=ISAs1 family transposase;pseudo=true;transl_table=11 NZ_JJMC01000013.1 RefSeq gene 1576 2085 . + . ID=gene-AB25_RS20890;Name=AB25_RS20890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS20890;old_locus_tag=AB25_0774 NZ_JJMC01000013.1 Protein Homology CDS 1576 2085 . + 0 ID=cds-WP_001053305.1;Parent=gene-AB25_RS20890;Dbxref=GenBank:WP_001053305.1;Name=WP_001053305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415235.1;locus_tag=AB25_RS20890;product=YbgA family protein;protein_id=WP_001053305.1;transl_table=11 NZ_JJMC01000013.1 RefSeq gene 2082 3500 . + . ID=gene-AB25_RS20885;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;locus_tag=AB25_RS20885;old_locus_tag=AB25_0775 NZ_JJMC01000013.1 Protein Homology CDS 2082 3500 . + 0 ID=cds-WP_000207146.1;Parent=gene-AB25_RS20885;Dbxref=GenBank:WP_000207146.1;Name=WP_000207146.1;gbkey=CDS;gene=phrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740284.1;locus_tag=AB25_RS20885;product=deoxyribodipyrimidine photo-lyase;protein_id=WP_000207146.1;transl_table=11 NZ_JJMC01000013.1 RefSeq gene 3542 5023 . - . ID=gene-AB25_RS20880;Name=dtpD;gbkey=Gene;gene=dtpD;gene_biotype=protein_coding;locus_tag=AB25_RS20880;old_locus_tag=AB25_0776 NZ_JJMC01000013.1 Protein Homology CDS 3542 5023 . - 0 ID=cds-WP_001032695.1;Parent=gene-AB25_RS20880;Dbxref=GenBank:WP_001032695.1;Name=WP_001032695.1;gbkey=CDS;gene=dtpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706523.1;locus_tag=AB25_RS20880;product=dipeptide permease DtpD;protein_id=WP_001032695.1;transl_table=11 NZ_JJMC01000013.1 RefSeq gene 5294 6037 . + . ID=gene-AB25_RS20875;Name=ybgI;gbkey=Gene;gene=ybgI;gene_biotype=protein_coding;locus_tag=AB25_RS20875;old_locus_tag=AB25_0777 NZ_JJMC01000013.1 Protein Homology CDS 5294 6037 . + 0 ID=cds-WP_032170619.1;Parent=gene-AB25_RS20875;Dbxref=GenBank:WP_032170619.1;Name=WP_032170619.1;gbkey=CDS;gene=ybgI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798886.1;locus_tag=AB25_RS20875;product=radiation resistance protein YbgI;protein_id=WP_032170619.1;transl_table=11 NZ_JJMC01000013.1 RefSeq gene 6060 6716 . + . ID=gene-AB25_RS20870;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=AB25_RS20870;old_locus_tag=AB25_0778 NZ_JJMC01000013.1 Protein Homology CDS 6060 6716 . + 0 ID=cds-WP_001188343.1;Parent=gene-AB25_RS20870;Dbxref=GenBank:WP_001188343.1;Name=WP_001188343.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpB;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308763.1;locus_tag=AB25_RS20870;product=5-oxoprolinase subunit PxpB;protein_id=WP_001188343.1;transl_table=11 NZ_JJMC01000013.1 RefSeq gene 6710 7642 . + . ID=gene-AB25_RS20865;Name=pxpC;gbkey=Gene;gene=pxpC;gene_biotype=protein_coding;locus_tag=AB25_RS20865;old_locus_tag=AB25_0779 NZ_JJMC01000013.1 Protein Homology CDS 6710 7642 . + 0 ID=cds-WP_000912736.1;Parent=gene-AB25_RS20865;Dbxref=GenBank:WP_000912736.1;Name=WP_000912736.1;gbkey=CDS;gene=pxpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308764.1;locus_tag=AB25_RS20865;product=5-oxoprolinase subunit PxpC;protein_id=WP_000912736.1;transl_table=11 NZ_JJMC01000013.1 RefSeq gene 7632 8366 . + . ID=gene-AB25_RS20860;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=AB25_RS20860;old_locus_tag=AB25_0780 NZ_JJMC01000013.1 Protein Homology CDS 7632 8366 . + 0 ID=cds-WP_000687114.1;Parent=gene-AB25_RS20860;Dbxref=GenBank:WP_000687114.1;Name=WP_000687114.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706520.1;locus_tag=AB25_RS20860;product=5-oxoprolinase subunit PxpA;protein_id=WP_000687114.1;transl_table=11 NZ_JJMC01000013.1 RefSeq gene 8402 9193 . + . ID=gene-AB25_RS20855;Name=nei;gbkey=Gene;gene=nei;gene_biotype=protein_coding;locus_tag=AB25_RS20855;old_locus_tag=AB25_0781 NZ_JJMC01000013.1 Protein Homology CDS 8402 9193 . + 0 ID=cds-WP_001114028.1;Parent=gene-AB25_RS20855;Dbxref=GenBank:WP_001114028.1;Name=WP_001114028.1;Ontology_term=GO:0006281,GO:0000703,GO:0003677,GO:0008270,GO:0140078;gbkey=CDS;gene=nei;go_function=oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity|0000703||IEA,DNA binding|0003677||IEA,zinc ion binding|0008270||IEA,class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308766.1;locus_tag=AB25_RS20855;product=endonuclease VIII;protein_id=WP_001114028.1;transl_table=11 NZ_JJMC01000013.1 RefSeq gene 9190 10236 . - . ID=gene-AB25_RS20850;Name=AB25_RS20850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS20850;old_locus_tag=AB25_0782 NZ_JJMC01000013.1 Protein Homology CDS 9190 10236 . - 0 ID=cds-WP_001297246.1;Parent=gene-AB25_RS20850;Dbxref=GenBank:WP_001297246.1;Name=WP_001297246.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415243.4;locus_tag=AB25_RS20850;product=AbrB family transcriptional regulator;protein_id=WP_001297246.1;transl_table=11 NZ_JJMC01000013.1 RefSeq gene 10388 11449 . - . ID=gene-AB25_RS20845;Name=AB25_RS20845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS20845;old_locus_tag=AB25_0783 NZ_JJMC01000013.1 Protein Homology CDS 10388 11449 . - 0 ID=cds-WP_001272421.1;Parent=gene-AB25_RS20845;Dbxref=GenBank:WP_001272421.1;Name=WP_001272421.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415244.4;locus_tag=AB25_RS20845;product=fimbrial protein;protein_id=WP_001272421.1;transl_table=11 NZ_JJMC01000013.1 RefSeq gene 11446 12177 . - . ID=gene-AB25_RS20840;Name=AB25_RS20840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS20840;old_locus_tag=AB25_0784 NZ_JJMC01000013.1 Protein Homology CDS 11446 12177 . - 0 ID=cds-WP_032170620.1;Parent=gene-AB25_RS20840;Dbxref=GenBank:WP_032170620.1;Name=WP_032170620.1;Ontology_term=GO:0043711,GO:0061077,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=pilus organization|0043711||IEA,chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706517.2;locus_tag=AB25_RS20840;product=fimbrial biogenesis chaperone;protein_id=WP_032170620.1;transl_table=11 NZ_JJMC01000013.1 RefSeq pseudogene 12192 14650 . - . ID=gene-AB25_RS20835;Name=AB25_RS20835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS20835;old_locus_tag=AB25_0785;pseudo=true NZ_JJMC01000013.1 Protein Homology CDS 12192 14650 . - 0 ID=cds-AB25_RS20835;Parent=gene-AB25_RS20835;Note=frameshifted;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706516.2;locus_tag=AB25_RS20835;product=fimbria/pilus outer membrane usher protein;pseudo=true;transl_table=11 NZ_JJMC01000013.1 RefSeq gene 14701 15267 . - . ID=gene-AB25_RS20830;Name=AB25_RS20830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS20830;old_locus_tag=AB25_0787 NZ_JJMC01000013.1 Protein Homology CDS 14701 15267 . - 0 ID=cds-WP_000472422.1;Parent=gene-AB25_RS20830;Dbxref=GenBank:WP_000472422.1;Name=WP_000472422.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706515.1;locus_tag=AB25_RS20830;product=fimbrial protein;protein_id=WP_000472422.1;transl_table=11 NZ_JJMC01000013.1 RefSeq gene 15658 16941 . - . ID=gene-AB25_RS20825;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=AB25_RS20825;old_locus_tag=AB25_0788 NZ_JJMC01000013.1 Protein Homology CDS 15658 16941 . - 0 ID=cds-WP_000785834.1;Parent=gene-AB25_RS20825;Dbxref=GenBank:WP_000785834.1;Name=WP_000785834.1;Ontology_term=GO:0006099,GO:0004108,GO:0005737;gbkey=CDS;gene=gltA;go_component=cytoplasm|0005737||IEA;go_function=citrate (Si)-synthase activity|0004108||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415248.1;locus_tag=AB25_RS20825;product=citrate synthase;protein_id=WP_000785834.1;transl_table=11 NZ_JJMC01000013.1 RefSeq gene 17147 17254 . - . ID=gene-AB25_RS31610;Name=AB25_RS31610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31610 NZ_JJMC01000013.1 Protein Homology CDS 17147 17254 . - 0 ID=cds-WP_001305582.1;Parent=gene-AB25_RS31610;Dbxref=GenBank:WP_001305582.1;Name=WP_001305582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518759.1;locus_tag=AB25_RS31610;product=hypothetical protein;protein_id=WP_001305582.1;transl_table=11 NZ_JJMC01000013.1 RefSeq gene 17635 18039 . + . ID=gene-AB25_RS0124610;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA,dhsC;locus_tag=AB25_RS0124610;old_locus_tag=AB25_0789 NZ_JJMC01000013.1 Protein Homology CDS 17635 18039 . + 0 ID=cds-WP_000263347.1;Parent=gene-AB25_RS0124610;Dbxref=GenBank:WP_000263347.1;Name=WP_000263347.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0016020,GO:0045273;gbkey=CDS;gene=sdhC;go_component=membrane|0016020||IEA,respiratory chain complex II (succinate dehydrogenase)|0045273||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000263334.1;locus_tag=AB25_RS0124610;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=WP_000263347.1;transl_table=11 NZ_JJMC01000013.1 RefSeq gene 18033 18380 . + . ID=gene-AB25_RS20820;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;gene_synonym=cybS,dhsD;locus_tag=AB25_RS20820;old_locus_tag=AB25_0790 NZ_JJMC01000013.1 Protein Homology CDS 18033 18380 . + 0 ID=cds-WP_000254365.1;Parent=gene-AB25_RS20820;Dbxref=GenBank:WP_000254365.1;Name=WP_000254365.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415250.1;locus_tag=AB25_RS20820;product=succinate dehydrogenase membrane anchor subunit;protein_id=WP_000254365.1;transl_table=11 NZ_JJMC01000013.1 RefSeq gene 18380 20146 . + . ID=gene-AB25_RS20815;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=AB25_RS20815;old_locus_tag=AB25_0791 NZ_JJMC01000013.1 Protein Homology CDS 18380 20146 . + 0 ID=cds-WP_000775540.1;Parent=gene-AB25_RS20815;Dbxref=GenBank:WP_000775540.1;Name=WP_000775540.1;Ontology_term=GO:0006099,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122549.1;locus_tag=AB25_RS20815;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_000775540.1;transl_table=11 NZ_JJMC01000013.1 RefSeq gene 20162 20878 . + . ID=gene-AB25_RS20810;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=AB25_RS20810;old_locus_tag=AB25_0792 NZ_JJMC01000013.1 Protein Homology CDS 20162 20878 . + 0 ID=cds-WP_001235263.1;Parent=gene-AB25_RS20810;Dbxref=GenBank:WP_001235263.1;Name=WP_001235263.1;gbkey=CDS;gene=sdhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133276.1;locus_tag=AB25_RS20810;product=succinate dehydrogenase iron-sulfur subunit SdhB;protein_id=WP_001235263.1;transl_table=11 NZ_JJMC01000013.1 RefSeq gene 21179 23980 . + . ID=gene-AB25_RS20805;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=AB25_RS20805;old_locus_tag=AB25_0794 NZ_JJMC01000013.1 Protein Homology CDS 21179 23980 . + 0 ID=cds-WP_001181473.1;Parent=gene-AB25_RS20805;Dbxref=GenBank:WP_001181473.1;Name=WP_001181473.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976,GO:0045252;gbkey=CDS;gene=sucA;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308778.1;locus_tag=AB25_RS20805;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_001181473.1;transl_table=11 NZ_JJMC01000013.1 RefSeq gene 23995 25212 . + . ID=gene-AB25_RS20800;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=AB25_RS20800;old_locus_tag=AB25_0795 NZ_JJMC01000013.1 Protein Homology CDS 23995 25212 . + 0 ID=cds-WP_000099823.1;Parent=gene-AB25_RS20800;Dbxref=GenBank:WP_000099823.1;Name=WP_000099823.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308779.1;locus_tag=AB25_RS20800;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_000099823.1;transl_table=11 NZ_JJMC01000013.1 RefSeq gene 25306 26472 . + . ID=gene-AB25_RS20795;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=AB25_RS20795;old_locus_tag=AB25_0796 NZ_JJMC01000013.1 Protein Homology CDS 25306 26472 . + 0 ID=cds-WP_001048602.1;Parent=gene-AB25_RS20795;Dbxref=GenBank:WP_001048602.1;Name=WP_001048602.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=AB25_RS20795;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_001048602.1;transl_table=11 NZ_JJMC01000013.1 RefSeq gene 26472 27341 . + . ID=gene-AB25_RS20790;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=AB25_RS20790;old_locus_tag=AB25_0797 NZ_JJMC01000013.1 Protein Homology CDS 26472 27341 . + 0 ID=cds-WP_000025458.1;Parent=gene-AB25_RS20790;Dbxref=GenBank:WP_000025458.1;Name=WP_000025458.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308781.1;locus_tag=AB25_RS20790;product=succinate--CoA ligase subunit alpha;protein_id=WP_000025458.1;transl_table=11 NZ_JJMC01000013.1 RefSeq gene 27445 28167 . - . ID=gene-AB25_RS20785;Name=mngR;gbkey=Gene;gene=mngR;gene_biotype=protein_coding;locus_tag=AB25_RS20785;old_locus_tag=AB25_0798 NZ_JJMC01000013.1 Protein Homology CDS 27445 28167 . - 0 ID=cds-WP_000509899.1;Parent=gene-AB25_RS20785;Dbxref=GenBank:WP_000509899.1;Name=WP_000509899.1;gbkey=CDS;gene=mngR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415258.1;locus_tag=AB25_RS20785;product=mannosyl-D-glycerate transport/metabolism system transcriptional repressor MngR;protein_id=WP_000509899.1;transl_table=11 NZ_JJMC01000013.1 RefSeq gene 28336 30252 . + . ID=gene-AB25_RS20780;Name=mngA;gbkey=Gene;gene=mngA;gene_biotype=protein_coding;locus_tag=AB25_RS20780;old_locus_tag=AB25_0799 NZ_JJMC01000013.1 Protein Homology CDS 28336 30252 . + 0 ID=cds-WP_001054863.1;Parent=gene-AB25_RS20780;Dbxref=GenBank:WP_001054863.1;Name=WP_001054863.1;Ontology_term=GO:0009401,GO:0005351,GO:0022877,GO:0016020;gbkey=CDS;gene=mngA;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001393949.1;locus_tag=AB25_RS20780;product=PTS 2-O-a-mannosyl-D-glycerate transporter subunit IIABC;protein_id=WP_001054863.1;transl_table=11 NZ_JJMC01000013.1 RefSeq gene 30270 32903 . + . ID=gene-AB25_RS20775;Name=mngB;gbkey=Gene;gene=mngB;gene_biotype=protein_coding;locus_tag=AB25_RS20775;old_locus_tag=AB25_0800 NZ_JJMC01000013.1 Protein Homology CDS 30270 32903 . + 0 ID=cds-WP_000649007.1;Parent=gene-AB25_RS20775;Dbxref=GenBank:WP_000649007.1;Name=WP_000649007.1;Ontology_term=GO:0006013,GO:0004559;gbkey=CDS;gene=mngB;go_function=alpha-mannosidase activity|0004559||IEA;go_process=mannose metabolic process|0006013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415260.1;locus_tag=AB25_RS20775;product=mannosylglycerate hydrolase;protein_id=WP_000649007.1;transl_table=11 NZ_JJMC01000013.1 RefSeq gene 33750 35318 . + . ID=gene-AB25_RS20765;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=AB25_RS20765;old_locus_tag=AB25_0802 NZ_JJMC01000013.1 Protein Homology CDS 33750 35318 . + 0 ID=cds-WP_001356183.1;Parent=gene-AB25_RS20765;Dbxref=GenBank:WP_001356183.1;Name=WP_001356183.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;gene=cydA;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415261.2;locus_tag=AB25_RS20765;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_001356183.1;transl_table=11 NZ_JJMC01000013.1 RefSeq gene 35334 36473 . + . ID=gene-AB25_RS20760;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=AB25_RS20760;old_locus_tag=AB25_0803 NZ_JJMC01000013.1 Protein Homology CDS 35334 36473 . + 0 ID=cds-WP_000568275.1;Parent=gene-AB25_RS20760;Dbxref=GenBank:WP_000568275.1;Name=WP_000568275.1;Ontology_term=GO:0016020;gbkey=CDS;gene=cydB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568269.1;locus_tag=AB25_RS20760;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000568275.1;transl_table=11 NZ_JJMC01000013.1 RefSeq gene 36488 36601 . + . ID=gene-AB25_RS20755;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;locus_tag=AB25_RS20755;old_locus_tag=AB25_0804 NZ_JJMC01000013.1 Protein Homology CDS 36488 36601 . + 0 ID=cds-WP_000270282.1;Parent=gene-AB25_RS20755;Dbxref=GenBank:WP_000270282.1;Name=WP_000270282.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588444.1;locus_tag=AB25_RS20755;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_000270282.1;transl_table=11 NZ_JJMC01000013.1 RefSeq gene 36601 36894 . + . ID=gene-AB25_RS20750;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=protein_coding;locus_tag=AB25_RS20750;old_locus_tag=AB25_0805 NZ_JJMC01000013.1 Protein Homology CDS 36601 36894 . + 0 ID=cds-WP_000034602.1;Parent=gene-AB25_RS20750;Dbxref=GenBank:WP_000034602.1;Name=WP_000034602.1;gbkey=CDS;gene=ybgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308797.1;locus_tag=AB25_RS20750;product=cyd operon protein YbgE;protein_id=WP_000034602.1;transl_table=11 NZ_JJMC01000013.1 RefSeq gene 37044 37448 . + . ID=gene-AB25_RS20745;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=AB25_RS20745;old_locus_tag=AB25_0806 NZ_JJMC01000013.1 Protein Homology CDS 37044 37448 . + 0 ID=cds-WP_001098384.1;Parent=gene-AB25_RS20745;Dbxref=GenBank:WP_001098384.1;Name=WP_001098384.1;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308798.1;locus_tag=AB25_RS20745;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_001098384.1;transl_table=11 NZ_JJMC01000013.1 RefSeq gene 37445 38137 . + . ID=gene-AB25_RS20740;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=AB25_RS20740;old_locus_tag=AB25_0807 NZ_JJMC01000013.1 Protein Homology CDS 37445 38137 . + 0 ID=cds-WP_000131314.1;Parent=gene-AB25_RS20740;Dbxref=GenBank:WP_000131314.1;Name=WP_000131314.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308799.1;locus_tag=AB25_RS20740;product=Tol-Pal system protein TolQ;protein_id=WP_000131314.1;transl_table=11 NZ_JJMC01000013.1 RefSeq gene 38141 38569 . + . ID=gene-AB25_RS20735;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=AB25_RS20735;old_locus_tag=AB25_0808 NZ_JJMC01000013.1 Protein Homology CDS 38141 38569 . + 0 ID=cds-WP_000090097.1;Parent=gene-AB25_RS20735;Dbxref=GenBank:WP_000090097.1;Name=WP_000090097.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965300.1;locus_tag=AB25_RS20735;product=colicin uptake protein TolR;protein_id=WP_000090097.1;transl_table=11 NZ_JJMC01000013.1 RefSeq gene 38634 39899 . + . ID=gene-AB25_RS20730;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=AB25_RS20730;old_locus_tag=AB25_0809 NZ_JJMC01000013.1 Protein Homology CDS 38634 39899 . + 0 ID=cds-WP_000030637.1;Parent=gene-AB25_RS20730;Dbxref=GenBank:WP_000030637.1;Name=WP_000030637.1;Ontology_term=GO:0043213,GO:0019534,GO:0016020;gbkey=CDS;gene=tolA;go_component=membrane|0016020||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415267.1;locus_tag=AB25_RS20730;product=cell envelope integrity protein TolA;protein_id=WP_000030637.1;transl_table=11 NZ_JJMC01000013.1 RefSeq gene 40032 41324 . + . ID=gene-AB25_RS20725;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=AB25_RS20725;old_locus_tag=AB25_0810 NZ_JJMC01000013.1 Protein Homology CDS 40032 41324 . + 0 ID=cds-WP_001295307.1;Parent=gene-AB25_RS20725;Dbxref=GenBank:WP_001295307.1;Name=WP_001295307.1;Ontology_term=GO:0017038,GO:0005215,GO:0042597;gbkey=CDS;gene=tolB;go_component=periplasmic space|0042597||IEA;go_function=transporter activity|0005215||IEA;go_process=protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001646851.1;locus_tag=AB25_RS20725;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_001295307.1;transl_table=11 NZ_JJMC01000013.1 RefSeq gene 41359 41880 . + . ID=gene-AB25_RS20720;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=AB25_RS20720;old_locus_tag=AB25_0811 NZ_JJMC01000013.1 Protein Homology CDS 41359 41880 . + 0 ID=cds-WP_001295306.1;Parent=gene-AB25_RS20720;Dbxref=GenBank:WP_001295306.1;Name=WP_001295306.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308803.1;locus_tag=AB25_RS20720;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_001295306.1;transl_table=11 NZ_JJMC01000013.1 RefSeq gene 41890 42681 . + . ID=gene-AB25_RS20715;Name=cpoB;gbkey=Gene;gene=cpoB;gene_biotype=protein_coding;locus_tag=AB25_RS20715;old_locus_tag=AB25_0812 NZ_JJMC01000013.1 Protein Homology CDS 41890 42681 . + 0 ID=cds-WP_032170621.1;Parent=gene-AB25_RS20715;Dbxref=GenBank:WP_032170621.1;Name=WP_032170621.1;Ontology_term=GO:0051301,GO:0070206,GO:0005515;gbkey=CDS;gene=cpoB;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA,protein trimerization|0070206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308804.1;locus_tag=AB25_RS20715;product=cell division protein CpoB;protein_id=WP_032170621.1;transl_table=11 NZ_JJMC01000013.1 RefSeq gene 42846 42921 . + . ID=gene-AB25_RS20710;Name=AB25_RS20710;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS20710;old_locus_tag=AB25_0813 NZ_JJMC01000013.1 tRNAscan-SE tRNA 42846 42921 . + . ID=rna-AB25_RS20710;Parent=gene-AB25_RS20710;anticodon=(pos:42879..42881);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS20710;product=tRNA-Lys NZ_JJMC01000013.1 tRNAscan-SE exon 42846 42921 . + . ID=exon-AB25_RS20710-1;Parent=rna-AB25_RS20710;anticodon=(pos:42879..42881);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS20710;product=tRNA-Lys NZ_JJMC01000013.1 RefSeq gene 43057 43132 . + . ID=gene-AB25_RS20705;Name=AB25_RS20705;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS20705;old_locus_tag=AB25_0814 NZ_JJMC01000013.1 tRNAscan-SE tRNA 43057 43132 . + . ID=rna-AB25_RS20705;Parent=gene-AB25_RS20705;anticodon=(pos:43090..43092);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS20705;product=tRNA-Val NZ_JJMC01000013.1 tRNAscan-SE exon 43057 43132 . + . ID=exon-AB25_RS20705-1;Parent=rna-AB25_RS20705;anticodon=(pos:43090..43092);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS20705;product=tRNA-Val NZ_JJMC01000013.1 RefSeq gene 43135 43210 . + . ID=gene-AB25_RS20700;Name=AB25_RS20700;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS20700;old_locus_tag=AB25_0815 NZ_JJMC01000013.1 tRNAscan-SE tRNA 43135 43210 . + . ID=rna-AB25_RS20700;Parent=gene-AB25_RS20700;anticodon=(pos:43168..43170);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS20700;product=tRNA-Lys NZ_JJMC01000013.1 tRNAscan-SE exon 43135 43210 . + . ID=exon-AB25_RS20700-1;Parent=rna-AB25_RS20700;anticodon=(pos:43168..43170);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS20700;product=tRNA-Lys ##sequence-region NZ_JJMC01000014.1 1 842 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000014.1 RefSeq region 1 842 . + . ID=NZ_JJMC01000014.1:1..842;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000014.1 RefSeq gene 104 179 . + . ID=gene-AB25_RS20695;Name=AB25_RS20695;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS20695;old_locus_tag=AB25_0818 NZ_JJMC01000014.1 tRNAscan-SE tRNA 104 179 . + . ID=rna-AB25_RS20695;Parent=gene-AB25_RS20695;anticodon=(pos:137..139);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS20695;product=tRNA-Val NZ_JJMC01000014.1 tRNAscan-SE exon 104 179 . + . ID=exon-AB25_RS20695-1;Parent=rna-AB25_RS20695;anticodon=(pos:137..139);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS20695;product=tRNA-Val NZ_JJMC01000014.1 RefSeq gene 224 299 . + . ID=gene-AB25_RS20690;Name=AB25_RS20690;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS20690;old_locus_tag=AB25_0819 NZ_JJMC01000014.1 tRNAscan-SE tRNA 224 299 . + . ID=rna-AB25_RS20690;Parent=gene-AB25_RS20690;anticodon=(pos:257..259);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS20690;product=tRNA-Val NZ_JJMC01000014.1 tRNAscan-SE exon 224 299 . + . ID=exon-AB25_RS20690-1;Parent=rna-AB25_RS20690;anticodon=(pos:257..259);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS20690;product=tRNA-Val NZ_JJMC01000014.1 RefSeq gene 344 419 . + . ID=gene-AB25_RS20685;Name=AB25_RS20685;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS20685;old_locus_tag=AB25_0820 NZ_JJMC01000014.1 tRNAscan-SE tRNA 344 419 . + . ID=rna-AB25_RS20685;Parent=gene-AB25_RS20685;anticodon=(pos:377..379);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS20685;product=tRNA-Val NZ_JJMC01000014.1 tRNAscan-SE exon 344 419 . + . ID=exon-AB25_RS20685-1;Parent=rna-AB25_RS20685;anticodon=(pos:377..379);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS20685;product=tRNA-Val NZ_JJMC01000014.1 RefSeq gene 424 499 . + . ID=gene-AB25_RS20680;Name=AB25_RS20680;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS20680;old_locus_tag=AB25_0821 NZ_JJMC01000014.1 tRNAscan-SE tRNA 424 499 . + . ID=rna-AB25_RS20680;Parent=gene-AB25_RS20680;anticodon=(pos:457..459);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS20680;product=tRNA-Lys NZ_JJMC01000014.1 tRNAscan-SE exon 424 499 . + . ID=exon-AB25_RS20680-1;Parent=rna-AB25_RS20680;anticodon=(pos:457..459);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS20680;product=tRNA-Lys NZ_JJMC01000014.1 RefSeq gene 530 655 . + . ID=gene-AB25_RS27300;Name=AB25_RS27300;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AB25_RS27300 NZ_JJMC01000014.1 cmsearch ncRNA 530 655 . + . ID=rna-AB25_RS27300;Parent=gene-AB25_RS27300;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS27300;product=RtT sRNA NZ_JJMC01000014.1 cmsearch exon 530 655 . + . ID=exon-AB25_RS27300-1;Parent=rna-AB25_RS27300;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS27300;product=RtT sRNA NZ_JJMC01000014.1 RefSeq gene 686 811 . + . ID=gene-AB25_RS27305;Name=AB25_RS27305;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AB25_RS27305 NZ_JJMC01000014.1 cmsearch ncRNA 686 811 . + . ID=rna-AB25_RS27305;Parent=gene-AB25_RS27305;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS27305;product=RtT sRNA NZ_JJMC01000014.1 cmsearch exon 686 811 . + . ID=exon-AB25_RS27305-1;Parent=rna-AB25_RS27305;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS27305;product=RtT sRNA ##sequence-region NZ_JJMC01000015.1 1 1544 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000015.1 RefSeq region 1 1544 . + . ID=NZ_JJMC01000015.1:1..1544;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000015.1 RefSeq gene 51 126 . + . ID=gene-AB25_RS20675;Name=AB25_RS20675;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS20675;old_locus_tag=AB25_0823 NZ_JJMC01000015.1 tRNAscan-SE tRNA 51 126 . + . ID=rna-AB25_RS20675;Parent=gene-AB25_RS20675;anticodon=(pos:84..86);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS20675;product=tRNA-Lys NZ_JJMC01000015.1 tRNAscan-SE exon 51 126 . + . ID=exon-AB25_RS20675-1;Parent=rna-AB25_RS20675;anticodon=(pos:84..86);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS20675;product=tRNA-Lys NZ_JJMC01000015.1 RefSeq gene 276 351 . + . ID=gene-AB25_RS20670;Name=AB25_RS20670;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS20670;old_locus_tag=AB25_0824 NZ_JJMC01000015.1 tRNAscan-SE tRNA 276 351 . + . ID=rna-AB25_RS20670;Parent=gene-AB25_RS20670;anticodon=(pos:309..311);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS20670;product=tRNA-Val NZ_JJMC01000015.1 tRNAscan-SE exon 276 351 . + . ID=exon-AB25_RS20670-1;Parent=rna-AB25_RS20670;anticodon=(pos:309..311);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS20670;product=tRNA-Val NZ_JJMC01000015.1 RefSeq gene 355 430 . + . ID=gene-AB25_RS20665;Name=AB25_RS20665;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS20665;old_locus_tag=AB25_0825 NZ_JJMC01000015.1 tRNAscan-SE tRNA 355 430 . + . ID=rna-AB25_RS20665;Parent=gene-AB25_RS20665;anticodon=(pos:388..390);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS20665;product=tRNA-Lys NZ_JJMC01000015.1 tRNAscan-SE exon 355 430 . + . ID=exon-AB25_RS20665-1;Parent=rna-AB25_RS20665;anticodon=(pos:388..390);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS20665;product=tRNA-Lys NZ_JJMC01000015.1 RefSeq gene 577 652 . + . ID=gene-AB25_RS20660;Name=AB25_RS20660;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS20660;old_locus_tag=AB25_0826 NZ_JJMC01000015.1 tRNAscan-SE tRNA 577 652 . + . ID=rna-AB25_RS20660;Parent=gene-AB25_RS20660;anticodon=(pos:610..612);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS20660;product=tRNA-Lys NZ_JJMC01000015.1 tRNAscan-SE exon 577 652 . + . ID=exon-AB25_RS20660-1;Parent=rna-AB25_RS20660;anticodon=(pos:610..612);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS20660;product=tRNA-Lys NZ_JJMC01000015.1 RefSeq gene 799 874 . + . ID=gene-AB25_RS20655;Name=AB25_RS20655;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS20655;old_locus_tag=AB25_0827 NZ_JJMC01000015.1 tRNAscan-SE tRNA 799 874 . + . ID=rna-AB25_RS20655;Parent=gene-AB25_RS20655;anticodon=(pos:832..834);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS20655;product=tRNA-Lys NZ_JJMC01000015.1 tRNAscan-SE exon 799 874 . + . ID=exon-AB25_RS20655-1;Parent=rna-AB25_RS20655;anticodon=(pos:832..834);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS20655;product=tRNA-Lys NZ_JJMC01000015.1 RefSeq gene 908 983 . + . ID=gene-AB25_RS20650;Name=AB25_RS20650;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS20650;old_locus_tag=AB25_0828 NZ_JJMC01000015.1 tRNAscan-SE tRNA 908 983 . + . ID=rna-AB25_RS20650;Parent=gene-AB25_RS20650;anticodon=(pos:941..943);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS20650;product=tRNA-Lys NZ_JJMC01000015.1 tRNAscan-SE exon 908 983 . + . ID=exon-AB25_RS20650-1;Parent=rna-AB25_RS20650;anticodon=(pos:941..943);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS20650;product=tRNA-Lys NZ_JJMC01000015.1 RefSeq gene 1017 1092 . + . ID=gene-AB25_RS20645;Name=AB25_RS20645;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS20645;old_locus_tag=AB25_0829 NZ_JJMC01000015.1 tRNAscan-SE tRNA 1017 1092 . + . ID=rna-AB25_RS20645;Parent=gene-AB25_RS20645;anticodon=(pos:1050..1052);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS20645;product=tRNA-Lys NZ_JJMC01000015.1 tRNAscan-SE exon 1017 1092 . + . ID=exon-AB25_RS20645-1;Parent=rna-AB25_RS20645;anticodon=(pos:1050..1052);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS20645;product=tRNA-Lys NZ_JJMC01000015.1 RefSeq gene 1126 1201 . + . ID=gene-AB25_RS20640;Name=AB25_RS20640;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS20640;old_locus_tag=AB25_0830 NZ_JJMC01000015.1 tRNAscan-SE tRNA 1126 1201 . + . ID=rna-AB25_RS20640;Parent=gene-AB25_RS20640;anticodon=(pos:1159..1161);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS20640;product=tRNA-Lys NZ_JJMC01000015.1 tRNAscan-SE exon 1126 1201 . + . ID=exon-AB25_RS20640-1;Parent=rna-AB25_RS20640;anticodon=(pos:1159..1161);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS20640;product=tRNA-Lys NZ_JJMC01000015.1 RefSeq gene 1232 1357 . + . ID=gene-AB25_RS27325;Name=AB25_RS27325;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AB25_RS27325 NZ_JJMC01000015.1 cmsearch ncRNA 1232 1357 . + . ID=rna-AB25_RS27325;Parent=gene-AB25_RS27325;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS27325;product=RtT sRNA NZ_JJMC01000015.1 cmsearch exon 1232 1357 . + . ID=exon-AB25_RS27325-1;Parent=rna-AB25_RS27325;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS27325;product=RtT sRNA NZ_JJMC01000015.1 RefSeq gene 1388 1513 . + . ID=gene-AB25_RS27330;Name=AB25_RS27330;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AB25_RS27330 NZ_JJMC01000015.1 cmsearch ncRNA 1388 1513 . + . ID=rna-AB25_RS27330;Parent=gene-AB25_RS27330;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS27330;product=RtT sRNA NZ_JJMC01000015.1 cmsearch exon 1388 1513 . + . ID=exon-AB25_RS27330-1;Parent=rna-AB25_RS27330;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS27330;product=RtT sRNA ##sequence-region NZ_JJMC01000016.1 1 168423 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000016.1 RefSeq region 1 168423 . + . ID=NZ_JJMC01000016.1:1..168423;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000016.1 RefSeq gene 1 847 . + . ID=gene-AB25_RS20635;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=AB25_RS20635;old_locus_tag=AB25_0831;partial=true;start_range=.,1 NZ_JJMC01000016.1 Protein Homology CDS 1 847 . + 1 ID=cds-WP_032295861.1;Parent=gene-AB25_RS20635;Dbxref=GenBank:WP_032295861.1;Name=WP_032295861.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415271.1;locus_tag=AB25_RS20635;partial=true;product=quinolinate synthase NadA;protein_id=WP_032295861.1;start_range=.,1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 885 1604 . + . ID=gene-AB25_RS20630;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=AB25_RS20630;old_locus_tag=AB25_0832 NZ_JJMC01000016.1 Protein Homology CDS 885 1604 . + 0 ID=cds-WP_000345410.1;Parent=gene-AB25_RS20630;Dbxref=GenBank:WP_000345410.1;Name=WP_000345410.1;gbkey=CDS;gene=pnuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415272.1;locus_tag=AB25_RS20630;product=nicotinamide riboside transporter PnuC;protein_id=WP_000345410.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 1601 2542 . - . ID=gene-AB25_RS20625;Name=zitB;gbkey=Gene;gene=zitB;gene_biotype=protein_coding;locus_tag=AB25_RS20625;old_locus_tag=AB25_0833 NZ_JJMC01000016.1 Protein Homology CDS 1601 2542 . - 0 ID=cds-WP_000951290.1;Parent=gene-AB25_RS20625;Dbxref=GenBank:WP_000951290.1;Name=WP_000951290.1;Ontology_term=GO:0006829,GO:0055085,GO:0005385,GO:0016020;gbkey=CDS;gene=zitB;go_component=membrane|0016020||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transport|0006829||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415273.1;locus_tag=AB25_RS20625;product=CDF family zinc transporter ZitB;protein_id=WP_000951290.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 2656 3036 . - . ID=gene-AB25_RS20620;Name=ybgS;gbkey=Gene;gene=ybgS;gene_biotype=protein_coding;locus_tag=AB25_RS20620;old_locus_tag=AB25_0834 NZ_JJMC01000016.1 Protein Homology CDS 2656 3036 . - 0 ID=cds-WP_000784351.1;Parent=gene-AB25_RS20620;Dbxref=GenBank:WP_000784351.1;Name=WP_000784351.1;gbkey=CDS;gene=ybgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415274.1;locus_tag=AB25_RS20620;product=YbgS-like family protein;protein_id=WP_000784351.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 3352 4404 . + . ID=gene-AB25_RS20615;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=AB25_RS20615;old_locus_tag=AB25_0835 NZ_JJMC01000016.1 Protein Homology CDS 3352 4404 . + 0 ID=cds-WP_001109192.1;Parent=gene-AB25_RS20615;Dbxref=GenBank:WP_001109192.1;Name=WP_001109192.1;gbkey=CDS;gene=aroG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109196.1;locus_tag=AB25_RS20615;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=WP_001109192.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 4562 5314 . - . ID=gene-AB25_RS20610;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=AB25_RS20610;old_locus_tag=AB25_0836 NZ_JJMC01000016.1 Protein Homology CDS 4562 5314 . - 0 ID=cds-WP_001295305.1;Parent=gene-AB25_RS20610;Dbxref=GenBank:WP_001295305.1;Name=WP_001295305.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=AB25_RS20610;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_001295305.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 5519 6559 . - . ID=gene-AB25_RS20605;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=AB25_RS20605;old_locus_tag=AB25_0837 NZ_JJMC01000016.1 Protein Homology CDS 5519 6559 . - 0 ID=cds-WP_000931389.1;Parent=gene-AB25_RS20605;Dbxref=GenBank:WP_000931389.1;Name=WP_000931389.1;Ontology_term=GO:0006012,GO:0004034;gbkey=CDS;gene=galM;go_function=aldose 1-epimerase activity|0004034||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415277.1;locus_tag=AB25_RS20605;product=galactose-1-epimerase;protein_id=WP_000931389.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 6553 7701 . - . ID=gene-AB25_RS20600;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=AB25_RS20600;old_locus_tag=AB25_0838 NZ_JJMC01000016.1 Protein Homology CDS 6553 7701 . - 0 ID=cds-WP_000053419.1;Parent=gene-AB25_RS20600;Dbxref=GenBank:WP_000053419.1;Name=WP_000053419.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001713229.1;locus_tag=AB25_RS20600;product=galactokinase;protein_id=WP_000053419.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 7705 8751 . - . ID=gene-AB25_RS20595;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=AB25_RS20595;old_locus_tag=AB25_0839 NZ_JJMC01000016.1 Protein Homology CDS 7705 8751 . - 0 ID=cds-WP_000191508.1;Parent=gene-AB25_RS20595;Dbxref=GenBank:WP_000191508.1;Name=WP_000191508.1;Ontology_term=GO:0006012,GO:0008108,GO:0008270;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA,zinc ion binding|0008270||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308813.1;locus_tag=AB25_RS20595;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_000191508.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 8761 9777 . - . ID=gene-AB25_RS20590;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=AB25_RS20590;old_locus_tag=AB25_0840 NZ_JJMC01000016.1 Protein Homology CDS 8761 9777 . - 0 ID=cds-WP_001265438.1;Parent=gene-AB25_RS20590;Dbxref=GenBank:WP_001265438.1;Name=WP_001265438.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415280.3;locus_tag=AB25_RS20590;product=UDP-glucose 4-epimerase GalE;protein_id=WP_001265438.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 10038 11510 . - . ID=gene-AB25_RS20585;Name=modF;gbkey=Gene;gene=modF;gene_biotype=protein_coding;locus_tag=AB25_RS20585;old_locus_tag=AB25_0841 NZ_JJMC01000016.1 Protein Homology CDS 10038 11510 . - 0 ID=cds-WP_032170624.1;Parent=gene-AB25_RS20585;Dbxref=GenBank:WP_032170624.1;Name=WP_032170624.1;Ontology_term=GO:0005524;gbkey=CDS;gene=modF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415281.1;locus_tag=AB25_RS20585;product=molybdate ABC transporter ATP-binding protein ModF;protein_id=WP_032170624.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 11578 12366 . - . ID=gene-AB25_RS20580;Name=modE;gbkey=Gene;gene=modE;gene_biotype=protein_coding;locus_tag=AB25_RS20580;old_locus_tag=AB25_0842 NZ_JJMC01000016.1 Protein Homology CDS 11578 12366 . - 0 ID=cds-WP_001147436.1;Parent=gene-AB25_RS20580;Dbxref=GenBank:WP_001147436.1;Name=WP_001147436.1;Ontology_term=GO:0006355,GO:0015689,GO:0003700,GO:0030151;gbkey=CDS;gene=modE;go_function=DNA-binding transcription factor activity|0003700||IEA,molybdenum ion binding|0030151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308816.1;locus_tag=AB25_RS20580;product=molybdenum-dependent transcriptional regulator;protein_id=WP_001147436.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 12495 12644 . + . ID=gene-AB25_RS20575;Name=acrZ;gbkey=Gene;gene=acrZ;gene_biotype=protein_coding;locus_tag=AB25_RS20575;old_locus_tag=AB25_0843 NZ_JJMC01000016.1 Protein Homology CDS 12495 12644 . + 0 ID=cds-WP_000891515.1;Parent=gene-AB25_RS20575;Dbxref=GenBank:WP_000891515.1;Name=WP_000891515.1;gbkey=CDS;gene=acrZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308817.1;locus_tag=AB25_RS20575;product=multidrug efflux pump accessory protein AcrZ;protein_id=WP_000891515.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 12811 13584 . + . ID=gene-AB25_RS20570;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=AB25_RS20570;old_locus_tag=AB25_0844 NZ_JJMC01000016.1 Protein Homology CDS 12811 13584 . + 0 ID=cds-WP_000101993.1;Parent=gene-AB25_RS20570;Dbxref=GenBank:WP_000101993.1;Name=WP_000101993.1;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308818.1;locus_tag=AB25_RS20570;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_000101993.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 13584 14273 . + . ID=gene-AB25_RS20565;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=AB25_RS20565;old_locus_tag=AB25_0845 NZ_JJMC01000016.1 Protein Homology CDS 13584 14273 . + 0 ID=cds-WP_000604034.1;Parent=gene-AB25_RS20565;Dbxref=GenBank:WP_000604034.1;Name=WP_000604034.1;Ontology_term=GO:0015689,GO:0015098,GO:0016020;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308819.1;locus_tag=AB25_RS20565;product=molybdate ABC transporter permease subunit;protein_id=WP_000604034.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 14276 15334 . + . ID=gene-AB25_RS20560;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=AB25_RS20560;old_locus_tag=AB25_0846 NZ_JJMC01000016.1 Protein Homology CDS 14276 15334 . + 0 ID=cds-WP_000891692.1;Parent=gene-AB25_RS20560;Dbxref=GenBank:WP_000891692.1;Name=WP_000891692.1;Ontology_term=GO:0015689,GO:0005524,GO:0015098,GO:0016020;gbkey=CDS;gene=modC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415286.1;locus_tag=AB25_RS20560;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=WP_000891692.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 15335 16153 . - . ID=gene-AB25_RS20555;Name=ybhA;gbkey=Gene;gene=ybhA;gene_biotype=protein_coding;locus_tag=AB25_RS20555;old_locus_tag=AB25_0847 NZ_JJMC01000016.1 Protein Homology CDS 15335 16153 . - 0 ID=cds-WP_000213425.1;Parent=gene-AB25_RS20555;Dbxref=GenBank:WP_000213425.1;Name=WP_000213425.1;gbkey=CDS;gene=ybhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308821.1;locus_tag=AB25_RS20555;product=bifunctional pyridoxal phosphate/fructose-1%2C6-bisphosphate phosphatase;protein_id=WP_000213425.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 16308 17303 . + . ID=gene-AB25_RS20550;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;gene_synonym=ybhE;locus_tag=AB25_RS20550;old_locus_tag=AB25_0848 NZ_JJMC01000016.1 Protein Homology CDS 16308 17303 . + 0 ID=cds-WP_000815449.1;Parent=gene-AB25_RS20550;Dbxref=GenBank:WP_000815449.1;Name=WP_000815449.1;Ontology_term=GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415288.1;locus_tag=AB25_RS20550;product=6-phosphogluconolactonase;protein_id=WP_000815449.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 17344 18297 . - . ID=gene-AB25_RS20545;Name=ybhD;gbkey=Gene;gene=ybhD;gene_biotype=protein_coding;locus_tag=AB25_RS20545;old_locus_tag=AB25_0849 NZ_JJMC01000016.1 Protein Homology CDS 17344 18297 . - 0 ID=cds-WP_000679972.1;Parent=gene-AB25_RS20545;Dbxref=GenBank:WP_000679972.1;Name=WP_000679972.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;gene=ybhD;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308823.3;locus_tag=AB25_RS20545;product=LysR family transcriptional regulator;protein_id=WP_000679972.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 18481 19533 . + . ID=gene-AB25_RS20540;Name=ybhH;gbkey=Gene;gene=ybhH;gene_biotype=protein_coding;locus_tag=AB25_RS20540;old_locus_tag=AB25_0851 NZ_JJMC01000016.1 Protein Homology CDS 18481 19533 . + 0 ID=cds-WP_000723652.1;Parent=gene-AB25_RS20540;Dbxref=GenBank:WP_000723652.1;Name=WP_000723652.1;gbkey=CDS;gene=ybhH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415290.1;locus_tag=AB25_RS20540;product=4-oxalomesaconate tautomerase;protein_id=WP_000723652.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 19609 21042 . + . ID=gene-AB25_RS20535;Name=ybhI;gbkey=Gene;gene=ybhI;gene_biotype=protein_coding;locus_tag=AB25_RS20535;old_locus_tag=AB25_0852 NZ_JJMC01000016.1 Protein Homology CDS 19609 21042 . + 0 ID=cds-WP_001036475.1;Parent=gene-AB25_RS20535;Dbxref=GenBank:WP_001036475.1;Name=WP_001036475.1;Ontology_term=GO:0022857,GO:0005886;gbkey=CDS;gene=ybhI;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415291.1;locus_tag=AB25_RS20535;product=anion permease;protein_id=WP_001036475.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 21225 23486 . + . ID=gene-AB25_RS20530;Name=ybhJ;gbkey=Gene;gene=ybhJ;gene_biotype=protein_coding;locus_tag=AB25_RS20530;old_locus_tag=AB25_0853 NZ_JJMC01000016.1 Protein Homology CDS 21225 23486 . + 0 ID=cds-WP_000593960.1;Parent=gene-AB25_RS20530;Dbxref=GenBank:WP_000593960.1;Name=WP_000593960.1;gbkey=CDS;gene=ybhJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415292.2;locus_tag=AB25_RS20530;product=hydratase;protein_id=WP_000593960.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 23720 25003 . - . ID=gene-AB25_RS20525;Name=ybhC;gbkey=Gene;gene=ybhC;gene_biotype=protein_coding;locus_tag=AB25_RS20525;old_locus_tag=AB25_0854 NZ_JJMC01000016.1 Protein Homology CDS 23720 25003 . - 0 ID=cds-WP_001091569.1;Parent=gene-AB25_RS20525;Dbxref=GenBank:WP_001091569.1;Name=WP_001091569.1;Ontology_term=GO:0042545,GO:0030599;gbkey=CDS;gene=ybhC;go_function=pectinesterase activity|0030599||IEA;go_process=cell wall modification|0042545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415293.1;locus_tag=AB25_RS20525;product=putative acyl-CoA thioester hydrolase;protein_id=WP_001091569.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 25138 26208 . - . ID=gene-AB25_RS20520;Name=AB25_RS20520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS20520;old_locus_tag=AB25_0855 NZ_JJMC01000016.1 Protein Homology CDS 25138 26208 . - 0 ID=cds-WP_032170625.1;Parent=gene-AB25_RS20520;Dbxref=GenBank:WP_032170625.1;Name=WP_032170625.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000533644.1;locus_tag=AB25_RS20520;product=tyrosine-type recombinase/integrase;protein_id=WP_032170625.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 26186 26404 . - . ID=gene-AB25_RS0124670;Name=AB25_RS0124670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0124670 NZ_JJMC01000016.1 Protein Homology CDS 26186 26404 . - 0 ID=cds-WP_001303849.1;Parent=gene-AB25_RS0124670;Dbxref=GenBank:WP_001303849.1;Name=WP_001303849.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001325331.1;locus_tag=AB25_RS0124670;product=excisionase;protein_id=WP_001303849.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 26444 26611 . - . ID=gene-AB25_RS20515;Name=AB25_RS20515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS20515;old_locus_tag=AB25_0856 NZ_JJMC01000016.1 Protein Homology CDS 26444 26611 . - 0 ID=cds-WP_000545745.1;Parent=gene-AB25_RS20515;Dbxref=GenBank:WP_000545745.1;Name=WP_000545745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308829.1;locus_tag=AB25_RS20515;product=hypothetical protein;protein_id=WP_000545745.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 26700 26981 . - . ID=gene-AB25_RS0124675;Name=AB25_RS0124675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0124675 NZ_JJMC01000016.1 Protein Homology CDS 26700 26981 . - 0 ID=cds-WP_000022062.1;Parent=gene-AB25_RS0124675;Dbxref=GenBank:WP_000022062.1;Name=WP_000022062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001579642.1;locus_tag=AB25_RS0124675;product=hypothetical protein;protein_id=WP_000022062.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 27096 27824 . - . ID=gene-AB25_RS27165;Name=bet;gbkey=Gene;gene=bet;gene_biotype=protein_coding;locus_tag=AB25_RS27165;old_locus_tag=AB25_0857 NZ_JJMC01000016.1 Protein Homology CDS 27096 27824 . - 0 ID=cds-WP_050439150.1;Parent=gene-AB25_RS27165;Dbxref=GenBank:WP_050439150.1;Name=WP_050439150.1;Ontology_term=GO:0006310;gbkey=CDS;gene=bet;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000208006.1;locus_tag=AB25_RS27165;product=phage recombination protein Bet;protein_id=WP_050439150.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 27830 28126 . - . ID=gene-AB25_RS20510;Name=AB25_RS20510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS20510;old_locus_tag=AB25_0858 NZ_JJMC01000016.1 Protein Homology CDS 27830 28126 . - 0 ID=cds-WP_000995439.1;Parent=gene-AB25_RS20510;Dbxref=GenBank:WP_000995439.1;Name=WP_000995439.1;Ontology_term=GO:0060703;gbkey=CDS;go_function=deoxyribonuclease inhibitor activity|0060703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309203.2;locus_tag=AB25_RS20510;product=host-nuclease inhibitor Gam family protein;protein_id=WP_000995439.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 28180 28344 . - . ID=gene-AB25_RS31615;Name=kil;gbkey=Gene;gene=kil;gene_biotype=protein_coding;locus_tag=AB25_RS31615;old_locus_tag=AB25_0859 NZ_JJMC01000016.1 Protein Homology CDS 28180 28344 . - 0 ID=cds-WP_001702774.1;Parent=gene-AB25_RS31615;Dbxref=GenBank:WP_001702774.1;Name=WP_001702774.1;gbkey=CDS;gene=kil;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000372922.1;locus_tag=AB25_RS31615;product=host cell division inhibitory peptide Kil;protein_id=WP_001702774.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 28313 28477 . - . ID=gene-AB25_RS31620;Name=AB25_RS31620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31620 NZ_JJMC01000016.1 Protein Homology CDS 28313 28477 . - 0 ID=cds-WP_001198861.1;Parent=gene-AB25_RS31620;Dbxref=GenBank:WP_001198861.1;Name=WP_001198861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309205.1;locus_tag=AB25_RS31620;product=protease FtsH-inhibitory lysogeny factor CIII;protein_id=WP_001198861.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 28550 28918 . - . ID=gene-AB25_RS20500;Name=AB25_RS20500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS20500;old_locus_tag=AB25_0860 NZ_JJMC01000016.1 Protein Homology CDS 28550 28918 . - 0 ID=cds-WP_000065371.1;Parent=gene-AB25_RS20500;Dbxref=GenBank:WP_000065371.1;Name=WP_000065371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309206.1;locus_tag=AB25_RS20500;product=DUF2528 family protein;protein_id=WP_000065371.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 29101 29301 . - . ID=gene-AB25_RS0124695;Name=AB25_RS0124695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0124695 NZ_JJMC01000016.1 Protein Homology CDS 29101 29301 . - 0 ID=cds-WP_000213968.1;Parent=gene-AB25_RS0124695;Dbxref=GenBank:WP_000213968.1;Name=WP_000213968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213972.1;locus_tag=AB25_RS0124695;product=antirestriction Ral family protein;protein_id=WP_000213968.1;transl_table=11 NZ_JJMC01000016.1 RefSeq pseudogene 29410 29628 . + . ID=gene-AB25_RS20495;Name=quuD;gbkey=Gene;gene=quuD;gene_biotype=pseudogene;locus_tag=AB25_RS20495;old_locus_tag=AB25_0862;partial=true;pseudo=true;start_range=.,29410 NZ_JJMC01000016.1 Protein Homology CDS 29410 29628 . + 0 ID=cds-AB25_RS20495;Parent=gene-AB25_RS20495;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=quuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415083.1;locus_tag=AB25_RS20495;partial=true;product=antitermination protein QuuD;pseudo=true;start_range=.,29410;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 29817 30899 . - . ID=gene-AB25_RS20490;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=AB25_RS20490;old_locus_tag=AB25_0863 NZ_JJMC01000016.1 Protein Homology CDS 29817 30899 . - 0 ID=cds-WP_000737263.1;Parent=gene-AB25_RS20490;Dbxref=GenBank:WP_000737263.1;Name=WP_000737263.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707819.1;locus_tag=AB25_RS20490;product=porin OmpC;protein_id=WP_000737263.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 31489 31704 . + . ID=gene-AB25_RS20485;Name=essD;gbkey=Gene;gene=essD;gene_biotype=protein_coding;locus_tag=AB25_RS20485;old_locus_tag=AB25_0864 NZ_JJMC01000016.1 Protein Homology CDS 31489 31704 . + 0 ID=cds-WP_000839596.1;Parent=gene-AB25_RS20485;Dbxref=GenBank:WP_000839596.1;Name=WP_000839596.1;gbkey=CDS;gene=essD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415086.1;locus_tag=AB25_RS20485;product=phage lysis protein EssD;protein_id=WP_000839596.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 31704 32201 . + . ID=gene-AB25_RS20480;Name=rrrD;gbkey=Gene;gene=rrrD;gene_biotype=protein_coding;locus_tag=AB25_RS20480;old_locus_tag=AB25_0865 NZ_JJMC01000016.1 Protein Homology CDS 31704 32201 . + 0 ID=cds-WP_001135294.1;Parent=gene-AB25_RS20480;Dbxref=GenBank:WP_001135294.1;Name=WP_001135294.1;gbkey=CDS;gene=rrrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415087.1;locus_tag=AB25_RS20480;product=lysozyme RrrD;protein_id=WP_001135294.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 32198 32659 . + . ID=gene-AB25_RS32915;Name=rzpD;gbkey=Gene;gene=rzpD;gene_biotype=protein_coding;locus_tag=AB25_RS32915;old_locus_tag=AB25_0866 NZ_JJMC01000016.1 Protein Homology CDS 32198 32659 . + 0 ID=cds-WP_001082754.1;Parent=gene-AB25_RS32915;Dbxref=GenBank:WP_001082754.1;Name=WP_001082754.1;gbkey=CDS;gene=rzpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415088.1;locus_tag=AB25_RS32915;product=prophage endopeptidase RzpD;protein_id=WP_001082754.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 32691 32984 . - . ID=gene-AB25_RS20470;Name=bor;gbkey=Gene;gene=bor;gene_biotype=protein_coding;locus_tag=AB25_RS20470;old_locus_tag=AB25_0867 NZ_JJMC01000016.1 Protein Homology CDS 32691 32984 . - 0 ID=cds-WP_000738492.1;Parent=gene-AB25_RS20470;Dbxref=GenBank:WP_000738492.1;Name=WP_000738492.1;gbkey=CDS;gene=bor;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309652.1;locus_tag=AB25_RS20470;product=serum resistance lipoprotein Bor;protein_id=WP_000738492.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 33275 33685 . - . ID=gene-AB25_RS20465;Name=ybcV;gbkey=Gene;gene=ybcV;gene_biotype=protein_coding;locus_tag=AB25_RS20465;old_locus_tag=AB25_0868 NZ_JJMC01000016.1 Protein Homology CDS 33275 33685 . - 0 ID=cds-WP_001403557.1;Parent=gene-AB25_RS20465;Dbxref=GenBank:WP_001403557.1;Name=WP_001403557.1;gbkey=CDS;gene=ybcV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415090.2;locus_tag=AB25_RS20465;product=DUF1398 domain-containing protein;protein_id=WP_001403557.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 33971 34177 . + . ID=gene-AB25_RS20460;Name=ybcW;gbkey=Gene;gene=ybcW;gene_biotype=protein_coding;locus_tag=AB25_RS20460;old_locus_tag=AB25_0869 NZ_JJMC01000016.1 Protein Homology CDS 33971 34177 . + 0 ID=cds-WP_001031427.1;Parent=gene-AB25_RS20460;Dbxref=GenBank:WP_001031427.1;Name=WP_001031427.1;gbkey=CDS;gene=ybcW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309654.1;locus_tag=AB25_RS20460;product=protein YbcW;protein_id=WP_001031427.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 34342 34536 . - . ID=gene-AB25_RS0124705;Name=ylcI;gbkey=Gene;gene=ylcI;gene_biotype=protein_coding;locus_tag=AB25_RS0124705;old_locus_tag=AB25_0870 NZ_JJMC01000016.1 Protein Homology CDS 34342 34536 . - 0 ID=cds-WP_001421937.1;Parent=gene-AB25_RS0124705;Dbxref=GenBank:WP_001421937.1;Name=WP_001421937.1;gbkey=CDS;gene=ylcI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165309.1;locus_tag=AB25_RS0124705;product=YlcI/YnfO family protein;protein_id=WP_001421937.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 34925 35494 . + . ID=gene-AB25_RS20455;Name=nohD;gbkey=Gene;gene=nohD;gene_biotype=protein_coding;locus_tag=AB25_RS20455;old_locus_tag=AB25_0872 NZ_JJMC01000016.1 Protein Homology CDS 34925 35494 . + 0 ID=cds-WP_050439151.1;Parent=gene-AB25_RS20455;Dbxref=GenBank:WP_050439151.1;Name=WP_050439151.1;gbkey=CDS;gene=nohD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001372490.1;locus_tag=AB25_RS20455;product=DNA-packaging protein;protein_id=WP_050439151.1;transl_table=11 NZ_JJMC01000016.1 RefSeq pseudogene 35431 36147 . + . ID=gene-AB25_RS20450;Name=AB25_RS20450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS20450;old_locus_tag=AB25_0874;partial=true;pseudo=true;start_range=.,35431 NZ_JJMC01000016.1 Protein Homology CDS 35431 36147 . + 0 ID=cds-AB25_RS20450;Parent=gene-AB25_RS20450;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019062,GO:0046718,GO:0098024;gbkey=CDS;go_component=virus tail%2C fiber|0098024||IEA;go_process=virion attachment to host cell|0019062||IEA,symbiont entry into host cell|0046718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364453.1;locus_tag=AB25_RS20450;partial=true;product=tail fiber domain-containing protein;pseudo=true;start_range=.,35431;transl_table=11 NZ_JJMC01000016.1 RefSeq pseudogene 36196 36327 . + . ID=gene-AB25_RS27815;Name=AB25_RS27815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS27815;partial=true;pseudo=true;start_range=.,36196 NZ_JJMC01000016.1 Protein Homology CDS 36196 36327 . + 0 ID=cds-AB25_RS27815;Parent=gene-AB25_RS27815;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001421130.1;locus_tag=AB25_RS27815;partial=true;product=tail fiber assembly protein;pseudo=true;start_range=.,36196;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 37833 38576 . + . ID=gene-AB25_RS20445;Name=AB25_RS20445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS20445;old_locus_tag=AB25_0875 NZ_JJMC01000016.1 Protein Homology CDS 37833 38576 . + 0 ID=cds-WP_000246057.1;Parent=gene-AB25_RS20445;Dbxref=GenBank:WP_000246057.1;Name=WP_000246057.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308314.1;locus_tag=AB25_RS20445;product=AraC family transcriptional regulator;protein_id=WP_000246057.1;transl_table=11 NZ_JJMC01000016.1 RefSeq pseudogene 38618 39070 . - . ID=gene-AB25_RS20440;Name=AB25_RS20440;end_range=39070,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS20440;old_locus_tag=AB25_0876;partial=true;pseudo=true NZ_JJMC01000016.1 Protein Homology CDS 38618 39070 . - 0 ID=cds-AB25_RS20440;Parent=gene-AB25_RS20440;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=39070,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611134.1;locus_tag=AB25_RS20440;partial=true;product=integrase core domain-containing protein;pseudo=true;transl_table=11 NZ_JJMC01000016.1 RefSeq pseudogene 39134 39280 . + . ID=gene-AB25_RS20435;Name=AB25_RS20435;end_range=39280,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS20435;old_locus_tag=AB25_0877;partial=true;pseudo=true NZ_JJMC01000016.1 Protein Homology CDS 39134 39280 . + 0 ID=cds-AB25_RS20435;Parent=gene-AB25_RS20435;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=39280,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612015.1;locus_tag=AB25_RS20435;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_JJMC01000016.1 RefSeq pseudogene 39280 39363 . - . ID=gene-AB25_RS32380;Name=AB25_RS32380;end_range=39363,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32380;partial=true;pseudo=true NZ_JJMC01000016.1 Protein Homology CDS 39280 39363 . - 0 ID=cds-AB25_RS32380;Parent=gene-AB25_RS32380;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=39363,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416850.1;locus_tag=AB25_RS32380;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 39679 40155 . - . ID=gene-AB25_RS20430;Name=ybhB;gbkey=Gene;gene=ybhB;gene_biotype=protein_coding;locus_tag=AB25_RS20430;old_locus_tag=AB25_0878 NZ_JJMC01000016.1 Protein Homology CDS 39679 40155 . - 0 ID=cds-WP_000767389.1;Parent=gene-AB25_RS20430;Dbxref=GenBank:WP_000767389.1;Name=WP_000767389.1;gbkey=CDS;gene=ybhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415294.1;locus_tag=AB25_RS20430;product=kinase inhibitor;protein_id=WP_000767389.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 40214 41503 . - . ID=gene-AB25_RS20425;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=AB25_RS20425;old_locus_tag=AB25_0879 NZ_JJMC01000016.1 Protein Homology CDS 40214 41503 . - 0 ID=cds-WP_001356070.1;Parent=gene-AB25_RS20425;Dbxref=GenBank:WP_001356070.1;Name=WP_001356070.1;Ontology_term=GO:0009102,GO:0004015,GO:0030170;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308879.1;locus_tag=AB25_RS20425;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_001356070.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 41590 42630 . + . ID=gene-AB25_RS20420;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=AB25_RS20420;old_locus_tag=AB25_0880 NZ_JJMC01000016.1 Protein Homology CDS 41590 42630 . + 0 ID=cds-WP_000951213.1;Parent=gene-AB25_RS20420;Dbxref=GenBank:WP_000951213.1;Name=WP_000951213.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415296.1;locus_tag=AB25_RS20420;product=biotin synthase BioB;protein_id=WP_000951213.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 42627 43781 . + . ID=gene-AB25_RS20415;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=AB25_RS20415;old_locus_tag=AB25_0881 NZ_JJMC01000016.1 Protein Homology CDS 42627 43781 . + 0 ID=cds-WP_000118826.1;Parent=gene-AB25_RS20415;Dbxref=GenBank:WP_000118826.1;Name=WP_000118826.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415297.1;locus_tag=AB25_RS20415;product=8-amino-7-oxononanoate synthase;protein_id=WP_000118826.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 43768 44523 . + . ID=gene-AB25_RS20410;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=AB25_RS20410;old_locus_tag=AB25_0882 NZ_JJMC01000016.1 Protein Homology CDS 43768 44523 . + 0 ID=cds-WP_000246761.1;Parent=gene-AB25_RS20410;Dbxref=GenBank:WP_000246761.1;Name=WP_000246761.1;Ontology_term=GO:0009102,GO:0010340;gbkey=CDS;gene=bioC;go_function=carboxyl-O-methyltransferase activity|0010340||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415298.1;locus_tag=AB25_RS20410;product=malonyl-ACP O-methyltransferase BioC;protein_id=WP_000246761.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 44516 45193 . + . ID=gene-AB25_RS20405;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=AB25_RS20405;old_locus_tag=AB25_0883 NZ_JJMC01000016.1 Protein Homology CDS 44516 45193 . + 0 ID=cds-WP_000044868.1;Parent=gene-AB25_RS20405;Dbxref=GenBank:WP_000044868.1;Name=WP_000044868.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706656.2;locus_tag=AB25_RS20405;product=dethiobiotin synthase;protein_id=WP_000044868.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 45772 47793 . + . ID=gene-AB25_RS20400;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=AB25_RS20400;old_locus_tag=AB25_0884 NZ_JJMC01000016.1 Protein Homology CDS 45772 47793 . + 0 ID=cds-WP_000042533.1;Parent=gene-AB25_RS20400;Dbxref=GenBank:WP_000042533.1;Name=WP_000042533.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123745.1;locus_tag=AB25_RS20400;product=excinuclease ABC subunit UvrB;protein_id=WP_000042533.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 47985 48893 . - . ID=gene-AB25_RS20395;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=protein_coding;locus_tag=AB25_RS20395;old_locus_tag=AB25_0885 NZ_JJMC01000016.1 Protein Homology CDS 47985 48893 . - 0 ID=cds-WP_001295302.1;Parent=gene-AB25_RS20395;Dbxref=GenBank:WP_001295302.1;Name=WP_001295302.1;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415301.1;locus_tag=AB25_RS20395;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;protein_id=WP_001295302.1;transl_table=11 NZ_JJMC01000016.1 cmsearch riboswitch 49158 49302 . + . ID=id-NZ_JJMC01000016.1:49158..49302;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JJMC01000016.1 RefSeq gene 49290 50279 . + . ID=gene-AB25_RS20390;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=AB25_RS20390;old_locus_tag=AB25_0886 NZ_JJMC01000016.1 Protein Homology CDS 49290 50279 . + 0 ID=cds-WP_001295301.1;Parent=gene-AB25_RS20390;Dbxref=GenBank:WP_001295301.1;Name=WP_001295301.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308886.1;locus_tag=AB25_RS20390;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_001295301.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 50301 50813 . + . ID=gene-AB25_RS20385;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=AB25_RS20385;old_locus_tag=AB25_0887 NZ_JJMC01000016.1 Protein Homology CDS 50301 50813 . + 0 ID=cds-WP_000084632.1;Parent=gene-AB25_RS20385;Dbxref=GenBank:WP_000084632.1;Name=WP_000084632.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaB;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123739.1;locus_tag=AB25_RS20385;product=molybdenum cofactor biosynthesis protein B;protein_id=WP_000084632.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 50816 51301 . + . ID=gene-AB25_RS20380;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=AB25_RS20380;old_locus_tag=AB25_0888 NZ_JJMC01000016.1 Protein Homology CDS 50816 51301 . + 0 ID=cds-WP_000080885.1;Parent=gene-AB25_RS20380;Dbxref=GenBank:WP_000080885.1;Name=WP_000080885.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308888.1;locus_tag=AB25_RS20380;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_000080885.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 51294 51539 . + . ID=gene-AB25_RS20375;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=AB25_RS20375;old_locus_tag=AB25_0889 NZ_JJMC01000016.1 Protein Homology CDS 51294 51539 . + 0 ID=cds-WP_000598619.1;Parent=gene-AB25_RS20375;Dbxref=GenBank:WP_000598619.1;Name=WP_000598619.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaD;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415305.1;locus_tag=AB25_RS20375;product=molybdopterin synthase sulfur carrier subunit;protein_id=WP_000598619.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 51541 51993 . + . ID=gene-AB25_RS20370;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=AB25_RS20370;old_locus_tag=AB25_0890 NZ_JJMC01000016.1 Protein Homology CDS 51541 51993 . + 0 ID=cds-WP_000852287.1;Parent=gene-AB25_RS20370;Dbxref=GenBank:WP_000852287.1;Name=WP_000852287.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaE;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415306.1;locus_tag=AB25_RS20370;product=molybdopterin synthase catalytic subunit MoaE;protein_id=WP_000852287.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 52130 52834 . + . ID=gene-AB25_RS20365;Name=ybhL;gbkey=Gene;gene=ybhL;gene_biotype=protein_coding;locus_tag=AB25_RS20365;old_locus_tag=AB25_0891 NZ_JJMC01000016.1 Protein Homology CDS 52130 52834 . + 0 ID=cds-WP_000373624.1;Parent=gene-AB25_RS20365;Dbxref=GenBank:WP_000373624.1;Name=WP_000373624.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ybhL;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415307.1;locus_tag=AB25_RS20365;product=Bax inhibitor-1/YccA family protein;protein_id=WP_000373624.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 53039 53752 . + . ID=gene-AB25_RS20360;Name=ybhM;gbkey=Gene;gene=ybhM;gene_biotype=protein_coding;locus_tag=AB25_RS20360;old_locus_tag=AB25_0892 NZ_JJMC01000016.1 Protein Homology CDS 53039 53752 . + 0 ID=cds-WP_000446932.1;Parent=gene-AB25_RS20360;Dbxref=GenBank:WP_000446932.1;Name=WP_000446932.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ybhM;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706665.2;locus_tag=AB25_RS20360;product=Bax inhibitor-1/YccA family protein;protein_id=WP_000446932.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 53788 54744 . - . ID=gene-AB25_RS20355;Name=ybhN;gbkey=Gene;gene=ybhN;gene_biotype=protein_coding;locus_tag=AB25_RS20355;old_locus_tag=AB25_0893 NZ_JJMC01000016.1 Protein Homology CDS 53788 54744 . - 0 ID=cds-WP_000045448.1;Parent=gene-AB25_RS20355;Dbxref=GenBank:WP_000045448.1;Name=WP_000045448.1;gbkey=CDS;gene=ybhN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415309.1;locus_tag=AB25_RS20355;product=lysylphosphatidylglycerol synthase domain-containing protein;protein_id=WP_000045448.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 54744 55985 . - . ID=gene-AB25_RS20350;Name=clsB;gbkey=Gene;gene=clsB;gene_biotype=protein_coding;locus_tag=AB25_RS20350;old_locus_tag=AB25_0894 NZ_JJMC01000016.1 Protein Homology CDS 54744 55985 . - 0 ID=cds-WP_000650339.1;Parent=gene-AB25_RS20350;Dbxref=GenBank:WP_000650339.1;Name=WP_000650339.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=clsB;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308894.1;locus_tag=AB25_RS20350;product=cardiolipin synthase ClsB;protein_id=WP_000650339.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 55982 56743 . - . ID=gene-AB25_RS20345;Name=ybhP;gbkey=Gene;gene=ybhP;gene_biotype=protein_coding;locus_tag=AB25_RS20345;old_locus_tag=AB25_0895 NZ_JJMC01000016.1 Protein Homology CDS 55982 56743 . - 0 ID=cds-WP_001113348.1;Parent=gene-AB25_RS20345;Dbxref=GenBank:WP_001113348.1;Name=WP_001113348.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ybhP;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308895.1;locus_tag=AB25_RS20345;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_001113348.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 56876 57286 . + . ID=gene-AB25_RS20340;Name=ybhQ;gbkey=Gene;gene=ybhQ;gene_biotype=protein_coding;locus_tag=AB25_RS20340;old_locus_tag=AB25_0896 NZ_JJMC01000016.1 Protein Homology CDS 56876 57286 . + 0 ID=cds-WP_000871986.1;Parent=gene-AB25_RS20340;Dbxref=GenBank:WP_000871986.1;Name=WP_000871986.1;gbkey=CDS;gene=ybhQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308896.1;locus_tag=AB25_RS20340;product=YbhQ family protein;protein_id=WP_000871986.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 57248 58354 . - . ID=gene-AB25_RS20335;Name=ybhR;gbkey=Gene;gene=ybhR;gene_biotype=protein_coding;locus_tag=AB25_RS20335;old_locus_tag=AB25_0897 NZ_JJMC01000016.1 Protein Homology CDS 57248 58354 . - 0 ID=cds-WP_024217457.1;Parent=gene-AB25_RS20335;Dbxref=GenBank:WP_024217457.1;Name=WP_024217457.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;gene=ybhR;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308897.1;locus_tag=AB25_RS20335;product=ABC transporter permease;protein_id=WP_024217457.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 58365 59498 . - . ID=gene-AB25_RS20330;Name=ybhS;gbkey=Gene;gene=ybhS;gene_biotype=protein_coding;locus_tag=AB25_RS20330;old_locus_tag=AB25_0898 NZ_JJMC01000016.1 Protein Homology CDS 58365 59498 . - 0 ID=cds-WP_000070131.1;Parent=gene-AB25_RS20330;Dbxref=GenBank:WP_000070131.1;Name=WP_000070131.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;gene=ybhS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308898.1;locus_tag=AB25_RS20330;product=ABC transporter permease;protein_id=WP_000070131.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 59491 61227 . - . ID=gene-AB25_RS20325;Name=ybhF;gbkey=Gene;gene=ybhF;gene_biotype=protein_coding;locus_tag=AB25_RS20325;old_locus_tag=AB25_0899 NZ_JJMC01000016.1 Protein Homology CDS 59491 61227 . - 0 ID=cds-WP_000996090.1;Parent=gene-AB25_RS20325;Dbxref=GenBank:WP_000996090.1;Name=WP_000996090.1;Ontology_term=GO:0005524;gbkey=CDS;gene=ybhF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308899.2;locus_tag=AB25_RS20325;product=ATP-binding cassette domain-containing protein;protein_id=WP_000996090.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 61220 62215 . - . ID=gene-AB25_RS20320;Name=hlyD;gbkey=Gene;gene=hlyD;gene_biotype=protein_coding;locus_tag=AB25_RS20320;old_locus_tag=AB25_0900 NZ_JJMC01000016.1 Protein Homology CDS 61220 62215 . - 0 ID=cds-WP_001324515.1;Parent=gene-AB25_RS20320;Dbxref=GenBank:WP_001324515.1;Name=WP_001324515.1;gbkey=CDS;gene=hlyD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308900.2;locus_tag=AB25_RS20320;product=secretion protein HlyD;protein_id=WP_001324515.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 62218 62889 . - . ID=gene-AB25_RS20315;Name=cecR;gbkey=Gene;gene=cecR;gene_biotype=protein_coding;locus_tag=AB25_RS20315;old_locus_tag=AB25_0901 NZ_JJMC01000016.1 Protein Homology CDS 62218 62889 . - 0 ID=cds-WP_001361582.1;Parent=gene-AB25_RS20315;Dbxref=GenBank:WP_001361582.1;Name=WP_001361582.1;gbkey=CDS;gene=cecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415317.4;locus_tag=AB25_RS20315;product=DNA-binding transcriptional regulator CecR;protein_id=WP_001361582.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 63118 64482 . + . ID=gene-AB25_RS20310;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=AB25_RS20310;old_locus_tag=AB25_0902 NZ_JJMC01000016.1 Protein Homology CDS 63118 64482 . + 0 ID=cds-WP_000007101.1;Parent=gene-AB25_RS20310;Dbxref=GenBank:WP_000007101.1;Name=WP_000007101.1;Ontology_term=GO:0003724;gbkey=CDS;gene=rhlE;go_function=RNA helicase activity|0003724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415318.1;locus_tag=AB25_RS20310;product=ATP-dependent RNA helicase RhlE;protein_id=WP_000007101.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 64714 65196 . - . ID=gene-AB25_RS20305;Name=ybiA;gbkey=Gene;gene=ybiA;gene_biotype=protein_coding;locus_tag=AB25_RS20305;old_locus_tag=AB25_0903 NZ_JJMC01000016.1 Protein Homology CDS 64714 65196 . - 0 ID=cds-WP_001145127.1;Parent=gene-AB25_RS20305;Dbxref=GenBank:WP_001145127.1;Name=WP_001145127.1;gbkey=CDS;gene=ybiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415319.1;locus_tag=AB25_RS20305;product=N-glycosidase YbiA;protein_id=WP_001145127.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 65316 67466 . + . ID=gene-AB25_RS20300;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=AB25_RS20300;old_locus_tag=AB25_0904 NZ_JJMC01000016.1 Protein Homology CDS 65316 67466 . + 0 ID=cds-WP_001340191.1;Parent=gene-AB25_RS20300;Dbxref=GenBank:WP_001340191.1;Name=WP_001340191.1;Ontology_term=GO:0006139,GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=dinG;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415320.1;locus_tag=AB25_RS20300;product=ATP-dependent DNA helicase DinG;protein_id=WP_001340191.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 67494 68456 . + . ID=gene-AB25_RS20295;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=AB25_RS20295;old_locus_tag=AB25_0905 NZ_JJMC01000016.1 Protein Homology CDS 67494 68456 . + 0 ID=cds-WP_032178967.1;Parent=gene-AB25_RS20295;Dbxref=GenBank:WP_032178967.1;Name=WP_032178967.1;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415321.1;locus_tag=AB25_RS20295;product=DNA-binding protein YbiB;protein_id=WP_032178967.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 68597 69682 . + . ID=gene-AB25_RS20290;Name=hcxB;gbkey=Gene;gene=hcxB;gene_biotype=protein_coding;locus_tag=AB25_RS20290;old_locus_tag=AB25_0906 NZ_JJMC01000016.1 Protein Homology CDS 68597 69682 . + 0 ID=cds-WP_000443530.1;Parent=gene-AB25_RS20290;Dbxref=GenBank:WP_000443530.1;Name=WP_000443530.1;gbkey=CDS;gene=hcxB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415322.1;locus_tag=AB25_RS20290;product=hydroxycarboxylate dehydrogenase HcXB;protein_id=WP_000443530.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 69749 69808 . + . ID=gene-AB25_RS32225;Name=ybiE;gbkey=Gene;gene=ybiE;gene_biotype=protein_coding;locus_tag=AB25_RS32225 NZ_JJMC01000016.1 Protein Homology CDS 69749 69808 . + 0 ID=cds-WP_211180490.1;Parent=gene-AB25_RS32225;Dbxref=GenBank:WP_211180490.1;Name=WP_211180490.1;gbkey=CDS;gene=ybiE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051178.1;locus_tag=AB25_RS32225;product=protein YbiE;protein_id=WP_211180490.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 69911 70171 . - . ID=gene-AB25_RS20285;Name=ybiJ;gbkey=Gene;gene=ybiJ;gene_biotype=protein_coding;locus_tag=AB25_RS20285;old_locus_tag=AB25_0907 NZ_JJMC01000016.1 Protein Homology CDS 69911 70171 . - 0 ID=cds-WP_000849301.1;Parent=gene-AB25_RS20285;Dbxref=GenBank:WP_000849301.1;Name=WP_000849301.1;gbkey=CDS;gene=ybiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415323.1;locus_tag=AB25_RS20285;product=DUF1471 family protein YbiJ;protein_id=WP_000849301.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 70436 70702 . - . ID=gene-AB25_RS20280;Name=ybiI;gbkey=Gene;gene=ybiI;gene_biotype=protein_coding;locus_tag=AB25_RS20280;old_locus_tag=AB25_0908 NZ_JJMC01000016.1 Protein Homology CDS 70436 70702 . - 0 ID=cds-WP_000146343.1;Parent=gene-AB25_RS20280;Dbxref=GenBank:WP_000146343.1;Name=WP_000146343.1;gbkey=CDS;gene=ybiI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415324.1;locus_tag=AB25_RS20280;product=C4-type zinc finger protein YbiI;protein_id=WP_000146343.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 70776 71453 . - . ID=gene-AB25_RS20275;Name=ybiX;gbkey=Gene;gene=ybiX;gene_biotype=protein_coding;locus_tag=AB25_RS20275;old_locus_tag=AB25_0909 NZ_JJMC01000016.1 Protein Homology CDS 70776 71453 . - 0 ID=cds-WP_000990177.1;Parent=gene-AB25_RS20275;Dbxref=GenBank:WP_000990177.1;Name=WP_000990177.1;gbkey=CDS;gene=ybiX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415325.4;locus_tag=AB25_RS20275;product=PKHD-type hydroxylase YbiX;protein_id=WP_000990177.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 71495 73777 . - . ID=gene-AB25_RS20270;Name=fiu;gbkey=Gene;gene=fiu;gene_biotype=protein_coding;locus_tag=AB25_RS20270;old_locus_tag=AB25_0910 NZ_JJMC01000016.1 Protein Homology CDS 71495 73777 . - 0 ID=cds-WP_000430057.1;Parent=gene-AB25_RS20270;Dbxref=GenBank:WP_000430057.1;Name=WP_000430057.1;Ontology_term=GO:0015891,GO:0015344;gbkey=CDS;gene=fiu;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415326.1;locus_tag=AB25_RS20270;product=catecholate siderophore receptor Fiu;protein_id=WP_000430057.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 74042 74302 . - . ID=gene-AB25_RS31630;Name=mcbA;gbkey=Gene;gene=mcbA;gene_biotype=protein_coding;locus_tag=AB25_RS31630;old_locus_tag=AB25_0911 NZ_JJMC01000016.1 Protein Homology CDS 74042 74302 . - 0 ID=cds-WP_000710619.1;Parent=gene-AB25_RS31630;Dbxref=GenBank:WP_000710619.1;Name=WP_000710619.1;gbkey=CDS;gene=mcbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415327.2;locus_tag=AB25_RS31630;product=DUF1471 family periplasmic protein McbA;protein_id=WP_000710619.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 74578 75504 . + . ID=gene-AB25_RS20260;Name=rlmF;gbkey=Gene;gene=rlmF;gene_biotype=protein_coding;locus_tag=AB25_RS20260;old_locus_tag=AB25_0912 NZ_JJMC01000016.1 Protein Homology CDS 74578 75504 . + 0 ID=cds-WP_001295299.1;Parent=gene-AB25_RS20260;Dbxref=GenBank:WP_001295299.1;Name=WP_001295299.1;Ontology_term=GO:0006364,GO:0008988;gbkey=CDS;gene=rlmF;go_function=rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415328.4;locus_tag=AB25_RS20260;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;protein_id=WP_001295299.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 75501 77726 . - . ID=gene-AB25_RS20255;Name=ybiO;gbkey=Gene;gene=ybiO;gene_biotype=protein_coding;locus_tag=AB25_RS20255;old_locus_tag=AB25_0913 NZ_JJMC01000016.1 Protein Homology CDS 75501 77726 . - 0 ID=cds-WP_001267253.1;Parent=gene-AB25_RS20255;Dbxref=GenBank:WP_001267253.1;Name=WP_001267253.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ybiO;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415329.4;locus_tag=AB25_RS20255;product=mechanosensitive channel protein;protein_id=WP_001267253.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 77987 78709 . - . ID=gene-AB25_RS20250;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=AB25_RS20250;old_locus_tag=AB25_0914 NZ_JJMC01000016.1 Protein Homology CDS 77987 78709 . - 0 ID=cds-WP_000569083.1;Parent=gene-AB25_RS20250;Dbxref=GenBank:WP_000569083.1;Name=WP_000569083.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=glnQ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569103.1;locus_tag=AB25_RS20250;product=glutamine ABC transporter ATP-binding protein GlnQ;protein_id=WP_000569083.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 78706 79365 . - . ID=gene-AB25_RS20245;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=AB25_RS20245;old_locus_tag=AB25_0915 NZ_JJMC01000016.1 Protein Homology CDS 78706 79365 . - 0 ID=cds-WP_001159065.1;Parent=gene-AB25_RS20245;Dbxref=GenBank:WP_001159065.1;Name=WP_001159065.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=glnP;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=AB25_RS20245;product=glutamine ABC transporter permease GlnP;protein_id=WP_001159065.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 79504 80250 . - . ID=gene-AB25_RS20240;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=AB25_RS20240;old_locus_tag=AB25_0916 NZ_JJMC01000016.1 Protein Homology CDS 79504 80250 . - 0 ID=cds-WP_000843866.1;Parent=gene-AB25_RS20240;Dbxref=GenBank:WP_000843866.1;Name=WP_000843866.1;Ontology_term=GO:1903803,GO:0015599,GO:0043190;gbkey=CDS;gene=glnH;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled L-glutamine transmembrane transporter activity|0015599||IEA;go_process=L-glutamine import across plasma membrane|1903803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123681.1;locus_tag=AB25_RS20240;product=glutamine ABC transporter substrate-binding protein GlnH;protein_id=WP_000843866.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 80654 81157 . - . ID=gene-AB25_RS20235;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;gene_synonym=pexB;locus_tag=AB25_RS20235;old_locus_tag=AB25_0917 NZ_JJMC01000016.1 Protein Homology CDS 80654 81157 . - 0 ID=cds-WP_000100800.1;Parent=gene-AB25_RS20235;Dbxref=GenBank:WP_000100800.1;Name=WP_000100800.1;Ontology_term=GO:0016722;gbkey=CDS;gene=dps;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001730644.1;locus_tag=AB25_RS20235;product=DNA starvation/stationary phase protection protein Dps;protein_id=WP_000100800.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 81456 82343 . - . ID=gene-AB25_RS20230;Name=rhtA;gbkey=Gene;gene=rhtA;gene_biotype=protein_coding;locus_tag=AB25_RS20230;old_locus_tag=AB25_0918 NZ_JJMC01000016.1 Protein Homology CDS 81456 82343 . - 0 ID=cds-WP_001295297.1;Parent=gene-AB25_RS20230;Dbxref=GenBank:WP_001295297.1;Name=WP_001295297.1;gbkey=CDS;gene=rhtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308918.1;locus_tag=AB25_RS20230;product=threonine/homoserine exporter RhtA;protein_id=WP_001295297.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 82578 82643 . + . ID=gene-AB25_RS31635;Name=AB25_RS31635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31635 NZ_JJMC01000016.1 Protein Homology CDS 82578 82643 . + 0 ID=cds-WP_120795379.1;Parent=gene-AB25_RS31635;Dbxref=GenBank:WP_120795379.1;Name=WP_120795379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518760.1;locus_tag=AB25_RS31635;product=protein YliM;protein_id=WP_120795379.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 82696 83211 . + . ID=gene-AB25_RS20225;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=AB25_RS20225;old_locus_tag=AB25_0919 NZ_JJMC01000016.1 Protein Homology CDS 82696 83211 . + 0 ID=cds-WP_001295296.1;Parent=gene-AB25_RS20225;Dbxref=GenBank:WP_001295296.1;Name=WP_001295296.1;gbkey=CDS;gene=ompX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308919.1;locus_tag=AB25_RS20225;product=outer membrane protein OmpX;protein_id=WP_001295296.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 83260 84843 . - . ID=gene-AB25_RS20220;Name=opgE;gbkey=Gene;gene=opgE;gene_biotype=protein_coding;locus_tag=AB25_RS20220;old_locus_tag=AB25_0920 NZ_JJMC01000016.1 Protein Homology CDS 83260 84843 . - 0 ID=cds-WP_001054678.1;Parent=gene-AB25_RS20220;Dbxref=GenBank:WP_001054678.1;Name=WP_001054678.1;gbkey=CDS;gene=opgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415336.1;locus_tag=AB25_RS20220;product=phosphoethanolamine transferase;protein_id=WP_001054678.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 85115 85243 . - . ID=gene-AB25_RS20215;Name=mntS;gbkey=Gene;gene=mntS;gene_biotype=protein_coding;locus_tag=AB25_RS20215;old_locus_tag=AB25_0921 NZ_JJMC01000016.1 Protein Homology CDS 85115 85243 . - 0 ID=cds-WP_001001761.1;Parent=gene-AB25_RS20215;Dbxref=GenBank:WP_001001761.1;Name=WP_001001761.1;gbkey=CDS;gene=mntS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439233.1;locus_tag=AB25_RS20215;product=manganase accumulation protein MntS;protein_id=WP_001001761.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 85429 85896 . + . ID=gene-AB25_RS20210;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=AB25_RS20210;old_locus_tag=AB25_0922 NZ_JJMC01000016.1 Protein Homology CDS 85429 85896 . + 0 ID=cds-WP_000091016.1;Parent=gene-AB25_RS20210;Dbxref=GenBank:WP_000091016.1;Name=WP_000091016.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;gene=mntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415338.1;locus_tag=AB25_RS20210;product=manganese-binding transcriptional regulator MntR;protein_id=WP_000091016.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 85893 87011 . + . ID=gene-AB25_RS20205;Name=ybiR;gbkey=Gene;gene=ybiR;gene_biotype=protein_coding;locus_tag=AB25_RS20205;old_locus_tag=AB25_0923 NZ_JJMC01000016.1 Protein Homology CDS 85893 87011 . + 0 ID=cds-WP_000056442.1;Parent=gene-AB25_RS20205;Dbxref=GenBank:WP_000056442.1;Name=WP_000056442.1;gbkey=CDS;gene=ybiR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415339.1;locus_tag=AB25_RS20205;product=anion transporter;protein_id=WP_000056442.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 87070 87990 . - . ID=gene-AB25_RS20200;Name=ldtB;gbkey=Gene;gene=ldtB;gene_biotype=protein_coding;locus_tag=AB25_RS20200;old_locus_tag=AB25_0924 NZ_JJMC01000016.1 Protein Homology CDS 87070 87990 . - 0 ID=cds-WP_001056384.1;Parent=gene-AB25_RS20200;Dbxref=GenBank:WP_001056384.1;Name=WP_001056384.1;gbkey=CDS;gene=ldtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308923.1;locus_tag=AB25_RS20200;product=L%2CD-transpeptidase;protein_id=WP_001056384.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 89200 90096 . + . ID=gene-AB25_RS20195;Name=AB25_RS20195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS20195;old_locus_tag=AB25_0925 NZ_JJMC01000016.1 Protein Homology CDS 89200 90096 . + 0 ID=cds-WP_000143776.1;Parent=gene-AB25_RS20195;Dbxref=GenBank:WP_000143776.1;Name=WP_000143776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000143776.1;locus_tag=AB25_RS20195;product=hypothetical protein;protein_id=WP_000143776.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 90178 91494 . - . ID=gene-AB25_RS20190;Name=AB25_RS20190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS20190;old_locus_tag=AB25_0926 NZ_JJMC01000016.1 Protein Homology CDS 90178 91494 . - 0 ID=cds-WP_000190482.1;Parent=gene-AB25_RS20190;Dbxref=GenBank:WP_000190482.1;Name=WP_000190482.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000190482.1;locus_tag=AB25_RS20190;product=DNA methyltransferase;protein_id=WP_000190482.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 91719 92360 . + . ID=gene-AB25_RS20185;Name=AB25_RS20185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS20185;old_locus_tag=AB25_0927 NZ_JJMC01000016.1 Protein Homology CDS 91719 92360 . + 0 ID=cds-WP_032170627.1;Parent=gene-AB25_RS20185;Dbxref=GenBank:WP_032170627.1;Name=WP_032170627.1;Ontology_term=GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000219416.1;locus_tag=AB25_RS20185;product=recombinase family protein;protein_id=WP_032170627.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 93280 94020 . - . ID=gene-AB25_RS20180;Name=AB25_RS20180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS20180;old_locus_tag=AB25_0928 NZ_JJMC01000016.1 Protein Homology CDS 93280 94020 . - 0 ID=cds-WP_000091958.1;Parent=gene-AB25_RS20180;Dbxref=GenBank:WP_000091958.1;Name=WP_000091958.1;Ontology_term=GO:0003677,GO:0004519,GO:0008270;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000091959.1;locus_tag=AB25_RS20180;product=HNH endonuclease;protein_id=WP_000091958.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 94230 94685 . - . ID=gene-AB25_RS20175;Name=AB25_RS20175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS20175;old_locus_tag=AB25_0929 NZ_JJMC01000016.1 Protein Homology CDS 94230 94685 . - 0 ID=cds-WP_000939303.1;Parent=gene-AB25_RS20175;Dbxref=GenBank:WP_000939303.1;Name=WP_000939303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000939303.1;locus_tag=AB25_RS20175;product=hypothetical protein;protein_id=WP_000939303.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 94901 95185 . + . ID=gene-AB25_RS0124730;Name=AB25_RS0124730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0124730 NZ_JJMC01000016.1 Protein Homology CDS 94901 95185 . + 0 ID=cds-WP_000909276.1;Parent=gene-AB25_RS0124730;Dbxref=GenBank:WP_000909276.1;Name=WP_000909276.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000909276.1;locus_tag=AB25_RS0124730;product=helix-turn-helix domain-containing protein;protein_id=WP_000909276.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 95270 95668 . - . ID=gene-AB25_RS20170;Name=AB25_RS20170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS20170;old_locus_tag=AB25_0930 NZ_JJMC01000016.1 Protein Homology CDS 95270 95668 . - 0 ID=cds-WP_001083558.1;Parent=gene-AB25_RS20170;Dbxref=GenBank:WP_001083558.1;Name=WP_001083558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001083558.1;locus_tag=AB25_RS20170;product=hypothetical protein;protein_id=WP_001083558.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 95733 97232 . - . ID=gene-AB25_RS20165;Name=AB25_RS20165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS20165;old_locus_tag=AB25_0931 NZ_JJMC01000016.1 Protein Homology CDS 95733 97232 . - 0 ID=cds-WP_000812327.1;Parent=gene-AB25_RS20165;Dbxref=GenBank:WP_000812327.1;Name=WP_000812327.1;Ontology_term=GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000812329.1;locus_tag=AB25_RS20165;product=recombinase family protein;protein_id=WP_000812327.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 97267 98859 . + . ID=gene-AB25_RS20160;Name=ybiT;gbkey=Gene;gene=ybiT;gene_biotype=protein_coding;locus_tag=AB25_RS20160;old_locus_tag=AB25_0932 NZ_JJMC01000016.1 Protein Homology CDS 97267 98859 . + 0 ID=cds-WP_032170628.1;Parent=gene-AB25_RS20160;Dbxref=GenBank:WP_032170628.1;Name=WP_032170628.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ybiT;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000923072.1;locus_tag=AB25_RS20160;product=ABC-F family ATPase;protein_id=WP_032170628.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 99100 100365 . - . ID=gene-AB25_RS20155;Name=ybiU;gbkey=Gene;gene=ybiU;gene_biotype=protein_coding;locus_tag=AB25_RS20155;old_locus_tag=AB25_0933 NZ_JJMC01000016.1 Protein Homology CDS 99100 100365 . - 0 ID=cds-WP_000168797.1;Parent=gene-AB25_RS20155;Dbxref=GenBank:WP_000168797.1;Name=WP_000168797.1;gbkey=CDS;gene=ybiU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415342.1;locus_tag=AB25_RS20155;product=DUF1479 domain-containing protein;protein_id=WP_000168797.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 100517 101332 . - . ID=gene-AB25_RS20150;Name=ybiV;gbkey=Gene;gene=ybiV;gene_biotype=protein_coding;locus_tag=AB25_RS20150;old_locus_tag=AB25_0934 NZ_JJMC01000016.1 Protein Homology CDS 100517 101332 . - 0 ID=cds-WP_000114234.1;Parent=gene-AB25_RS20150;Dbxref=GenBank:WP_000114234.1;Name=WP_000114234.1;gbkey=CDS;gene=ybiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706699.1;locus_tag=AB25_RS20150;product=sugar-phosphatase YbiV;protein_id=WP_000114234.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 101478 103910 . - . ID=gene-AB25_RS20145;Name=ybiW;gbkey=Gene;gene=ybiW;gene_biotype=protein_coding;locus_tag=AB25_RS20145;old_locus_tag=AB25_0935 NZ_JJMC01000016.1 Protein Homology CDS 101478 103910 . - 0 ID=cds-WP_000209314.1;Parent=gene-AB25_RS20145;Dbxref=GenBank:WP_000209314.1;Name=WP_000209314.1;gbkey=CDS;gene=ybiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415344.1;locus_tag=AB25_RS20145;product=glycyl radical protein;protein_id=WP_000209314.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 103916 104815 . - . ID=gene-AB25_RS20140;Name=ybiY;gbkey=Gene;gene=ybiY;gene_biotype=protein_coding;locus_tag=AB25_RS20140;old_locus_tag=AB25_0936 NZ_JJMC01000016.1 Protein Homology CDS 103916 104815 . - 0 ID=cds-WP_001295295.1;Parent=gene-AB25_RS20140;Dbxref=GenBank:WP_001295295.1;Name=WP_001295295.1;gbkey=CDS;gene=ybiY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415345.2;locus_tag=AB25_RS20140;product=glycyl-radical enzyme activating protein;protein_id=WP_001295295.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 104946 105608 . + . ID=gene-AB25_RS20135;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=AB25_RS20135;old_locus_tag=AB25_0937 NZ_JJMC01000016.1 Protein Homology CDS 104946 105608 . + 0 ID=cds-WP_000424890.1;Parent=gene-AB25_RS20135;Dbxref=GenBank:WP_000424890.1;Name=WP_000424890.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415346.4;locus_tag=AB25_RS20135;product=fructose-6-phosphate aldolase;protein_id=WP_000424890.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 105684 106433 . - . ID=gene-AB25_RS20130;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=AB25_RS20130;old_locus_tag=AB25_0938 NZ_JJMC01000016.1 Protein Homology CDS 105684 106433 . - 0 ID=cds-WP_000829258.1;Parent=gene-AB25_RS20130;Dbxref=GenBank:WP_000829258.1;Name=WP_000829258.1;Ontology_term=GO:0006777,GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706703.1;locus_tag=AB25_RS20130;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_000829258.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 106433 107668 . - . ID=gene-AB25_RS20125;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=AB25_RS20125;old_locus_tag=AB25_0939 NZ_JJMC01000016.1 Protein Homology CDS 106433 107668 . - 0 ID=cds-WP_000397381.1;Parent=gene-AB25_RS20125;Dbxref=GenBank:WP_000397381.1;Name=WP_000397381.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA,molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415348.1;locus_tag=AB25_RS20125;product=molybdopterin molybdotransferase MoeA;protein_id=WP_000397381.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 107872 108837 . + . ID=gene-AB25_RS20120;Name=iaaA;gbkey=Gene;gene=iaaA;gene_biotype=protein_coding;locus_tag=AB25_RS20120;old_locus_tag=AB25_0940 NZ_JJMC01000016.1 Protein Homology CDS 107872 108837 . + 0 ID=cds-WP_000513775.1;Parent=gene-AB25_RS20120;Dbxref=GenBank:WP_000513775.1;Name=WP_000513775.1;gbkey=CDS;gene=iaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415349.1;locus_tag=AB25_RS20120;product=beta-aspartyl-peptidase;protein_id=WP_000513775.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 108824 110695 . + . ID=gene-AB25_RS20115;Name=gsiA;gbkey=Gene;gene=gsiA;gene_biotype=protein_coding;locus_tag=AB25_RS20115;old_locus_tag=AB25_0941 NZ_JJMC01000016.1 Protein Homology CDS 108824 110695 . + 0 ID=cds-WP_001315369.1;Parent=gene-AB25_RS20115;Dbxref=GenBank:WP_001315369.1;Name=WP_001315369.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=gsiA;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415350.2;locus_tag=AB25_RS20115;product=glutathione ABC transporter ATP-binding protein GsiA;protein_id=WP_001315369.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 110715 112253 . + . ID=gene-AB25_RS20110;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=protein_coding;locus_tag=AB25_RS20110;old_locus_tag=AB25_0942 NZ_JJMC01000016.1 Protein Homology CDS 110715 112253 . + 0 ID=cds-WP_000090138.1;Parent=gene-AB25_RS20110;Dbxref=GenBank:WP_000090138.1;Name=WP_000090138.1;Ontology_term=GO:0034775,GO:0034634,GO:0043190;gbkey=CDS;gene=gsiB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=glutathione transmembrane transporter activity|0034634||IEA;go_process=glutathione transmembrane transport|0034775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308936.1;locus_tag=AB25_RS20110;product=glutathione ABC transporter substrate-binding protein GsiB;protein_id=WP_000090138.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 112271 113191 . + . ID=gene-AB25_RS20105;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=protein_coding;locus_tag=AB25_RS20105;old_locus_tag=AB25_0943 NZ_JJMC01000016.1 Protein Homology CDS 112271 113191 . + 0 ID=cds-WP_000936043.1;Parent=gene-AB25_RS20105;Dbxref=GenBank:WP_000936043.1;Name=WP_000936043.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415352.1;locus_tag=AB25_RS20105;product=glutathione ABC transporter permease GsiC;protein_id=WP_000936043.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 113194 114105 . + . ID=gene-AB25_RS20100;Name=gsiD;gbkey=Gene;gene=gsiD;gene_biotype=protein_coding;locus_tag=AB25_RS20100;old_locus_tag=AB25_0944 NZ_JJMC01000016.1 Protein Homology CDS 113194 114105 . + 0 ID=cds-WP_001236044.1;Parent=gene-AB25_RS20100;Dbxref=GenBank:WP_001236044.1;Name=WP_001236044.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiD;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308938.1;locus_tag=AB25_RS20100;product=glutathione ABC transporter permease GsiD;protein_id=WP_001236044.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 114283 116631 . + . ID=gene-AB25_RS20095;Name=pdeI;gbkey=Gene;gene=pdeI;gene_biotype=protein_coding;locus_tag=AB25_RS20095;old_locus_tag=AB25_0945 NZ_JJMC01000016.1 Protein Homology CDS 114283 116631 . + 0 ID=cds-WP_001398829.1;Parent=gene-AB25_RS20095;Dbxref=GenBank:WP_001398829.1;Name=WP_001398829.1;Ontology_term=GO:0007165,GO:0071111;gbkey=CDS;gene=pdeI;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415354.1;locus_tag=AB25_RS20095;product=sensor domain-containing phosphodiesterase;protein_id=WP_001398829.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 116639 117967 . + . ID=gene-AB25_RS20090;Name=dgcI;gbkey=Gene;gene=dgcI;gene_biotype=protein_coding;locus_tag=AB25_RS20090;old_locus_tag=AB25_0946 NZ_JJMC01000016.1 Protein Homology CDS 116639 117967 . + 0 ID=cds-WP_000086916.1;Parent=gene-AB25_RS20090;Dbxref=GenBank:WP_000086916.1;Name=WP_000086916.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;gene=dgcI;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308940.1;locus_tag=AB25_RS20090;product=GGDEF domain-containing protein;protein_id=WP_000086916.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 118014 119339 . - . ID=gene-AB25_RS20085;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=AB25_RS20085;old_locus_tag=AB25_0947 NZ_JJMC01000016.1 Protein Homology CDS 118014 119339 . - 0 ID=cds-WP_000049367.1;Parent=gene-AB25_RS20085;Dbxref=GenBank:WP_000049367.1;Name=WP_000049367.1;Ontology_term=GO:0018339,GO:0008172,GO:0016740,GO:0016782,GO:0051539,GO:1904047,GO:0005737;gbkey=CDS;gene=rimO;go_component=cytoplasm|0005737||IEA;go_function=S-methyltransferase activity|0008172||IEA,transferase activity|0016740||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308942.1;locus_tag=AB25_RS20085;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_000049367.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 119552 119935 . + . ID=gene-AB25_RS20080;Name=bssR;gbkey=Gene;gene=bssR;gene_biotype=protein_coding;locus_tag=AB25_RS20080;old_locus_tag=AB25_0948 NZ_JJMC01000016.1 Protein Homology CDS 119552 119935 . + 0 ID=cds-WP_000497137.1;Parent=gene-AB25_RS20080;Dbxref=GenBank:WP_000497137.1;Name=WP_000497137.1;gbkey=CDS;gene=bssR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308943.1;locus_tag=AB25_RS20080;product=biofilm formation regulator BssR;protein_id=WP_000497137.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 120046 121161 . + . ID=gene-AB25_RS20075;Name=yliI;gbkey=Gene;gene=yliI;gene_biotype=protein_coding;locus_tag=AB25_RS20075;old_locus_tag=AB25_0949 NZ_JJMC01000016.1 Protein Homology CDS 120046 121161 . + 0 ID=cds-WP_000555035.1;Parent=gene-AB25_RS20075;Dbxref=GenBank:WP_000555035.1;Name=WP_000555035.1;gbkey=CDS;gene=yliI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415358.1;locus_tag=AB25_RS20075;product=aldose sugar dehydrogenase YliI;protein_id=WP_000555035.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 121158 121784 . - . ID=gene-AB25_RS20070;Name=gstB;gbkey=Gene;gene=gstB;gene_biotype=protein_coding;locus_tag=AB25_RS20070;old_locus_tag=AB25_0950 NZ_JJMC01000016.1 Protein Homology CDS 121158 121784 . - 0 ID=cds-WP_001295292.1;Parent=gene-AB25_RS20070;Dbxref=GenBank:WP_001295292.1;Name=WP_001295292.1;gbkey=CDS;gene=gstB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308945.2;locus_tag=AB25_RS20070;product=glutathione S-transferase GstB;protein_id=WP_001295292.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 122031 123233 . + . ID=gene-AB25_RS20065;Name=dacC;gbkey=Gene;gene=dacC;gene_biotype=protein_coding;locus_tag=AB25_RS20065;old_locus_tag=AB25_0951 NZ_JJMC01000016.1 Protein Homology CDS 122031 123233 . + 0 ID=cds-WP_000195961.1;Parent=gene-AB25_RS20065;Dbxref=GenBank:WP_000195961.1;Name=WP_000195961.1;gbkey=CDS;gene=dacC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308946.1;locus_tag=AB25_RS20065;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_000195961.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 123280 124038 . - . ID=gene-AB25_RS20060;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=AB25_RS20060;old_locus_tag=AB25_0952 NZ_JJMC01000016.1 Protein Homology CDS 123280 124038 . - 0 ID=cds-WP_000450121.1;Parent=gene-AB25_RS20060;Dbxref=GenBank:WP_000450121.1;Name=WP_000450121.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=deoR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308947.1;locus_tag=AB25_RS20060;product=DNA-binding transcriptional repressor DeoR;protein_id=WP_000450121.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 124096 124692 . - . ID=gene-AB25_RS20055;Name=ybjG;gbkey=Gene;gene=ybjG;gene_biotype=protein_coding;locus_tag=AB25_RS20055;old_locus_tag=AB25_0953 NZ_JJMC01000016.1 Protein Homology CDS 124096 124692 . - 0 ID=cds-WP_001324525.1;Parent=gene-AB25_RS20055;Dbxref=GenBank:WP_001324525.1;Name=WP_001324525.1;Ontology_term=GO:0050380,GO:0005886;gbkey=CDS;gene=ybjG;go_component=plasma membrane|0005886||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308948.1;locus_tag=AB25_RS20055;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001324525.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 124977 126209 . + . ID=gene-AB25_RS20050;Name=mdfA;gbkey=Gene;gene=mdfA;gene_biotype=protein_coding;locus_tag=AB25_RS20050;old_locus_tag=AB25_0954 NZ_JJMC01000016.1 Protein Homology CDS 124977 126209 . + 0 ID=cds-WP_032170629.1;Parent=gene-AB25_RS20050;Dbxref=GenBank:WP_032170629.1;Name=WP_032170629.1;gbkey=CDS;gene=mdfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308949.1;locus_tag=AB25_RS20050;product=multidrug efflux MFS transporter MdfA;protein_id=WP_032170629.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 126250 126534 . - . ID=gene-AB25_RS20045;Name=ybjH;gbkey=Gene;gene=ybjH;gene_biotype=protein_coding;locus_tag=AB25_RS20045;old_locus_tag=AB25_0955 NZ_JJMC01000016.1 Protein Homology CDS 126250 126534 . - 0 ID=cds-WP_077754629.1;Parent=gene-AB25_RS20045;Dbxref=GenBank:WP_077754629.1;Name=WP_077754629.1;gbkey=CDS;gene=ybjH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415364.1;locus_tag=AB25_RS20045;product=protein YbjH;protein_id=WP_077754629.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 126620 127435 . - . ID=gene-AB25_RS20040;Name=ybjI;gbkey=Gene;gene=ybjI;gene_biotype=protein_coding;locus_tag=AB25_RS20040;old_locus_tag=AB25_0956 NZ_JJMC01000016.1 Protein Homology CDS 126620 127435 . - 0 ID=cds-WP_001299614.1;Parent=gene-AB25_RS20040;Dbxref=GenBank:WP_001299614.1;Name=WP_001299614.1;gbkey=CDS;gene=ybjI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415365.4;locus_tag=AB25_RS20040;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase;protein_id=WP_001299614.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 127435 128643 . - . ID=gene-AB25_RS20035;Name=ybjJ;gbkey=Gene;gene=ybjJ;gene_biotype=protein_coding;locus_tag=AB25_RS20035;old_locus_tag=AB25_0957 NZ_JJMC01000016.1 Protein Homology CDS 127435 128643 . - 0 ID=cds-WP_000217869.1;Parent=gene-AB25_RS20035;Dbxref=GenBank:WP_000217869.1;Name=WP_000217869.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ybjJ;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415366.1;locus_tag=AB25_RS20035;product=MFS transporter;protein_id=WP_000217869.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 128727 129263 . + . ID=gene-AB25_RS20030;Name=rcdA;gbkey=Gene;gene=rcdA;gene_biotype=protein_coding;locus_tag=AB25_RS20030;old_locus_tag=AB25_0958 NZ_JJMC01000016.1 Protein Homology CDS 128727 129263 . + 0 ID=cds-WP_001297003.1;Parent=gene-AB25_RS20030;Dbxref=GenBank:WP_001297003.1;Name=WP_001297003.1;gbkey=CDS;gene=rcdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308953.1;locus_tag=AB25_RS20030;product=DNA-binding transcriptional regulator RcdA;protein_id=WP_001297003.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 129438 131123 . - . ID=gene-AB25_RS20025;Name=ybjL;gbkey=Gene;gene=ybjL;gene_biotype=protein_coding;locus_tag=AB25_RS20025;old_locus_tag=AB25_0959 NZ_JJMC01000016.1 Protein Homology CDS 129438 131123 . - 0 ID=cds-WP_001024876.1;Parent=gene-AB25_RS20025;Dbxref=GenBank:WP_001024876.1;Name=WP_001024876.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;gene=ybjL;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001024888.1;locus_tag=AB25_RS20025;product=aspartate:alanine antiporter;protein_id=WP_001024876.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 131393 131770 . + . ID=gene-AB25_RS20020;Name=ybjM;gbkey=Gene;gene=ybjM;gene_biotype=protein_coding;locus_tag=AB25_RS20020;old_locus_tag=AB25_0960 NZ_JJMC01000016.1 Protein Homology CDS 131393 131770 . + 0 ID=cds-WP_000681108.1;Parent=gene-AB25_RS20020;Dbxref=GenBank:WP_000681108.1;Name=WP_000681108.1;gbkey=CDS;gene=ybjM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308955.1;locus_tag=AB25_RS20020;product=inner membrane protein YbjM;protein_id=WP_000681108.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 131800 132057 . - . ID=gene-AB25_RS20015;Name=grxA;gbkey=Gene;gene=grxA;gene_biotype=protein_coding;locus_tag=AB25_RS20015;old_locus_tag=AB25_0961 NZ_JJMC01000016.1 Protein Homology CDS 131800 132057 . - 0 ID=cds-WP_001195240.1;Parent=gene-AB25_RS20015;Dbxref=GenBank:WP_001195240.1;Name=WP_001195240.1;gbkey=CDS;gene=grxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415370.1;locus_tag=AB25_RS20015;product=glutaredoxin 1;protein_id=WP_001195240.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 132217 132504 . + . ID=gene-AB25_RS20010;Name=ybjC;gbkey=Gene;gene=ybjC;gene_biotype=protein_coding;locus_tag=AB25_RS20010;old_locus_tag=AB25_0962 NZ_JJMC01000016.1 Protein Homology CDS 132217 132504 . + 0 ID=cds-WP_001201560.1;Parent=gene-AB25_RS20010;Dbxref=GenBank:WP_001201560.1;Name=WP_001201560.1;gbkey=CDS;gene=ybjC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415371.1;locus_tag=AB25_RS20010;product=DUF1418 family protein;protein_id=WP_001201560.1;transl_table=11 NZ_JJMC01000016.1 RefSeq pseudogene 132488 133209 . + . ID=gene-AB25_RS0124735;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=pseudogene;locus_tag=AB25_RS0124735;pseudo=true NZ_JJMC01000016.1 Protein Homology CDS 132488 133209 . + 0 ID=cds-AB25_RS0124735;Parent=gene-AB25_RS0124735;Note=frameshifted;gbkey=CDS;gene=nfsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415372.1;locus_tag=AB25_RS0124735;product=nitroreductase NfsA;pseudo=true;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 133270 134172 . + . ID=gene-AB25_RS20005;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=AB25_RS20005;old_locus_tag=AB25_0965 NZ_JJMC01000016.1 Protein Homology CDS 133270 134172 . + 0 ID=cds-WP_000684321.1;Parent=gene-AB25_RS20005;Dbxref=GenBank:WP_000684321.1;Name=WP_000684321.1;Ontology_term=GO:0036211,GO:0005524,GO:0046872;gbkey=CDS;gene=rimK;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308959.1;locus_tag=AB25_RS20005;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=WP_000684321.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 134260 134736 . + . ID=gene-AB25_RS20000;Name=ybjN;gbkey=Gene;gene=ybjN;gene_biotype=protein_coding;locus_tag=AB25_RS20000;old_locus_tag=AB25_0966 NZ_JJMC01000016.1 Protein Homology CDS 134260 134736 . + 0 ID=cds-WP_000203025.1;Parent=gene-AB25_RS20000;Dbxref=GenBank:WP_000203025.1;Name=WP_000203025.1;gbkey=CDS;gene=ybjN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308960.1;locus_tag=AB25_RS20000;product=YbjN domain-containing protein;protein_id=WP_000203025.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 135087 136199 . + . ID=gene-AB25_RS19995;Name=potF;gbkey=Gene;gene=potF;gene_biotype=protein_coding;locus_tag=AB25_RS19995;old_locus_tag=AB25_0968 NZ_JJMC01000016.1 Protein Homology CDS 135087 136199 . + 0 ID=cds-WP_000126053.1;Parent=gene-AB25_RS19995;Dbxref=GenBank:WP_000126053.1;Name=WP_000126053.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potF;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415375.1;locus_tag=AB25_RS19995;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;protein_id=WP_000126053.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 136294 137427 . + . ID=gene-AB25_RS19990;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=AB25_RS19990;old_locus_tag=AB25_0969 NZ_JJMC01000016.1 Protein Homology CDS 136294 137427 . + 0 ID=cds-WP_000995994.1;Parent=gene-AB25_RS19990;Dbxref=GenBank:WP_000995994.1;Name=WP_000995994.1;Ontology_term=GO:0015846,GO:0055085,GO:0005524,GO:0015417,GO:0022857,GO:0043190;gbkey=CDS;gene=potG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type polyamine transporter activity|0015417||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996010.1;locus_tag=AB25_RS19990;product=putrescine ABC transporter ATP-binding subunit PotG;protein_id=WP_000995994.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 137437 138390 . + . ID=gene-AB25_RS19985;Name=potH;gbkey=Gene;gene=potH;gene_biotype=protein_coding;locus_tag=AB25_RS19985;old_locus_tag=AB25_0970 NZ_JJMC01000016.1 Protein Homology CDS 137437 138390 . + 0 ID=cds-WP_001093864.1;Parent=gene-AB25_RS19985;Dbxref=GenBank:WP_001093864.1;Name=WP_001093864.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potH;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706736.1;locus_tag=AB25_RS19985;product=putrescine ABC transporter permease PotH;protein_id=WP_001093864.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 138387 139232 . + . ID=gene-AB25_RS19980;Name=potI;gbkey=Gene;gene=potI;gene_biotype=protein_coding;locus_tag=AB25_RS19980;old_locus_tag=AB25_0971 NZ_JJMC01000016.1 Protein Homology CDS 138387 139232 . + 0 ID=cds-WP_001061657.1;Parent=gene-AB25_RS19980;Dbxref=GenBank:WP_001061657.1;Name=WP_001061657.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potI;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415378.1;locus_tag=AB25_RS19980;product=putrescine ABC transporter permease PotI;protein_id=WP_001061657.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 139292 139780 . + . ID=gene-AB25_RS19975;Name=ybjO;gbkey=Gene;gene=ybjO;gene_biotype=protein_coding;locus_tag=AB25_RS19975;old_locus_tag=AB25_0972 NZ_JJMC01000016.1 Protein Homology CDS 139292 139780 . + 0 ID=cds-WP_000389260.1;Parent=gene-AB25_RS19975;Dbxref=GenBank:WP_000389260.1;Name=WP_000389260.1;gbkey=CDS;gene=ybjO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308965.1;locus_tag=AB25_RS19975;product=YbjO family protein;protein_id=WP_000389260.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 139821 140948 . + . ID=gene-AB25_RS19970;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=AB25_RS19970;old_locus_tag=AB25_0973 NZ_JJMC01000016.1 Protein Homology CDS 139821 140948 . + 0 ID=cds-WP_001149732.1;Parent=gene-AB25_RS19970;Dbxref=GenBank:WP_001149732.1;Name=WP_001149732.1;Ontology_term=GO:0016070,GO:0008649;gbkey=CDS;gene=rlmC;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706739.1;locus_tag=AB25_RS19970;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_001149732.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 141123 141854 . - . ID=gene-AB25_RS19965;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=AB25_RS19965;old_locus_tag=AB25_0974 NZ_JJMC01000016.1 Protein Homology CDS 141123 141854 . - 0 ID=cds-WP_001295905.1;Parent=gene-AB25_RS19965;Dbxref=GenBank:WP_001295905.1;Name=WP_001295905.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415381.1;locus_tag=AB25_RS19965;product=arginine ABC transporter substrate-binding protein ArtJ;protein_id=WP_001295905.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 142146 142814 . - . ID=gene-AB25_RS19960;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=AB25_RS19960;old_locus_tag=AB25_0975 NZ_JJMC01000016.1 Protein Homology CDS 142146 142814 . - 0 ID=cds-WP_000464484.1;Parent=gene-AB25_RS19960;Dbxref=GenBank:WP_000464484.1;Name=WP_000464484.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308971.1;locus_tag=AB25_RS19960;product=arginine ABC transporter permease ArtM;protein_id=WP_000464484.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 142814 143530 . - . ID=gene-AB25_RS19955;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=AB25_RS19955;old_locus_tag=AB25_0976 NZ_JJMC01000016.1 Protein Homology CDS 142814 143530 . - 0 ID=cds-WP_001001691.1;Parent=gene-AB25_RS19955;Dbxref=GenBank:WP_001001691.1;Name=WP_001001691.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artQ;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415383.1;locus_tag=AB25_RS19955;product=arginine ABC transporter permease ArtQ;protein_id=WP_001001691.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 143537 144268 . - . ID=gene-AB25_RS19950;Name=artI;gbkey=Gene;gene=artI;gene_biotype=protein_coding;locus_tag=AB25_RS19950;old_locus_tag=AB25_0977 NZ_JJMC01000016.1 Protein Homology CDS 143537 144268 . - 0 ID=cds-WP_000756569.1;Parent=gene-AB25_RS19950;Dbxref=GenBank:WP_000756569.1;Name=WP_000756569.1;Ontology_term=GO:0015424,GO:0043190;gbkey=CDS;gene=artI;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type amino acid transporter activity|0015424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415384.1;locus_tag=AB25_RS19950;product=arginine ABC transporter substrate-binding protein ArtI;protein_id=WP_000756569.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 144286 145014 . - . ID=gene-AB25_RS19945;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=AB25_RS19945;old_locus_tag=AB25_0978 NZ_JJMC01000016.1 Protein Homology CDS 144286 145014 . - 0 ID=cds-WP_000027205.1;Parent=gene-AB25_RS19945;Dbxref=GenBank:WP_000027205.1;Name=WP_000027205.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424,GO:0043190;gbkey=CDS;gene=artP;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742668.1;locus_tag=AB25_RS19945;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=WP_000027205.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 145232 145747 . - . ID=gene-AB25_RS19940;Name=ybjP;gbkey=Gene;gene=ybjP;gene_biotype=protein_coding;locus_tag=AB25_RS19940;old_locus_tag=AB25_0979 NZ_JJMC01000016.1 Protein Homology CDS 145232 145747 . - 0 ID=cds-WP_001270738.1;Parent=gene-AB25_RS19940;Dbxref=GenBank:WP_001270738.1;Name=WP_001270738.1;gbkey=CDS;gene=ybjP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415386.1;locus_tag=AB25_RS19940;product=lipoprotein;protein_id=WP_001270738.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 145873 146196 . + . ID=gene-AB25_RS19935;Name=ybjQ;gbkey=Gene;gene=ybjQ;gene_biotype=protein_coding;locus_tag=AB25_RS19935;old_locus_tag=AB25_0980 NZ_JJMC01000016.1 Protein Homology CDS 145873 146196 . + 0 ID=cds-WP_001160737.1;Parent=gene-AB25_RS19935;Dbxref=GenBank:WP_001160737.1;Name=WP_001160737.1;gbkey=CDS;gene=ybjQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308979.1;locus_tag=AB25_RS19935;product=heavy metal-binding domain-containing protein;protein_id=WP_001160737.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 146193 147023 . + . ID=gene-AB25_RS19930;Name=amiD;gbkey=Gene;gene=amiD;gene_biotype=protein_coding;locus_tag=AB25_RS19930;old_locus_tag=AB25_0981 NZ_JJMC01000016.1 Protein Homology CDS 146193 147023 . + 0 ID=cds-WP_001255167.1;Parent=gene-AB25_RS19930;Dbxref=GenBank:WP_001255167.1;Name=WP_001255167.1;gbkey=CDS;gene=amiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415388.1;locus_tag=AB25_RS19930;product=N-acetylmuramoyl-L-alanine amidase AmiD;protein_id=WP_001255167.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 147020 148033 . - . ID=gene-AB25_RS19925;Name=ybjS;gbkey=Gene;gene=ybjS;gene_biotype=protein_coding;locus_tag=AB25_RS19925;old_locus_tag=AB25_0982 NZ_JJMC01000016.1 Protein Homology CDS 147020 148033 . - 0 ID=cds-WP_001338420.1;Parent=gene-AB25_RS19925;Dbxref=GenBank:WP_001338420.1;Name=WP_001338420.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;gene=ybjS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415389.2;locus_tag=AB25_RS19925;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_001338420.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 148132 149562 . - . ID=gene-AB25_RS19920;Name=ybjT;gbkey=Gene;gene=ybjT;gene_biotype=protein_coding;locus_tag=AB25_RS19920;old_locus_tag=AB25_0983 NZ_JJMC01000016.1 Protein Homology CDS 148132 149562 . - 0 ID=cds-WP_001136554.1;Parent=gene-AB25_RS19920;Dbxref=GenBank:WP_001136554.1;Name=WP_001136554.1;gbkey=CDS;gene=ybjT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415390.4;locus_tag=AB25_RS19920;product=SDR family oxidoreductase;protein_id=WP_001136554.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 149573 150574 . - . ID=gene-AB25_RS19915;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;locus_tag=AB25_RS19915;old_locus_tag=AB25_0984 NZ_JJMC01000016.1 Protein Homology CDS 149573 150574 . - 0 ID=cds-WP_000566372.1;Parent=gene-AB25_RS19915;Dbxref=GenBank:WP_000566372.1;Name=WP_000566372.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;gene=ltaE;go_function=lyase activity|0016829||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706751.1;locus_tag=AB25_RS19915;product=low-specificity L-threonine aldolase;protein_id=WP_000566372.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 150611 152329 . - . ID=gene-AB25_RS19910;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=AB25_RS19910;old_locus_tag=AB25_0985 NZ_JJMC01000016.1 Protein Homology CDS 150611 152329 . - 0 ID=cds-WP_000815362.1;Parent=gene-AB25_RS19910;Dbxref=GenBank:WP_000815362.1;Name=WP_000815362.1;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415392.1;locus_tag=AB25_RS19910;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=WP_000815362.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 152462 153430 . - . ID=gene-AB25_RS19905;Name=hcr;gbkey=Gene;gene=hcr;gene_biotype=protein_coding;locus_tag=AB25_RS19905;old_locus_tag=AB25_0986 NZ_JJMC01000016.1 Protein Homology CDS 152462 153430 . - 0 ID=cds-WP_000178677.1;Parent=gene-AB25_RS19905;Dbxref=GenBank:WP_000178677.1;Name=WP_000178677.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=hcr;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415393.1;locus_tag=AB25_RS19905;product=NADH oxidoreductase;protein_id=WP_000178677.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 153442 155094 . - . ID=gene-AB25_RS19900;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=AB25_RS19900;old_locus_tag=AB25_0987 NZ_JJMC01000016.1 Protein Homology CDS 153442 155094 . - 0 ID=cds-WP_000458817.1;Parent=gene-AB25_RS19900;Dbxref=GenBank:WP_000458817.1;Name=WP_000458817.1;Ontology_term=GO:0016661,GO:0051536;gbkey=CDS;gene=hcp;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122080.1;locus_tag=AB25_RS19900;product=hydroxylamine reductase;protein_id=WP_000458817.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 155238 156137 . - . ID=gene-AB25_RS19895;Name=lysO;gbkey=Gene;gene=lysO;gene_biotype=protein_coding;locus_tag=AB25_RS19895;old_locus_tag=AB25_0988 NZ_JJMC01000016.1 Protein Homology CDS 155238 156137 . - 0 ID=cds-WP_000491142.1;Parent=gene-AB25_RS19895;Dbxref=GenBank:WP_000491142.1;Name=WP_000491142.1;gbkey=CDS;gene=lysO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415395.2;locus_tag=AB25_RS19895;product=L-lysine exporter LysO;protein_id=WP_000491142.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 156632 157327 . - . ID=gene-AB25_RS19890;Name=aqpZ;gbkey=Gene;gene=aqpZ;gene_biotype=protein_coding;locus_tag=AB25_RS19890;old_locus_tag=AB25_0989 NZ_JJMC01000016.1 Protein Homology CDS 156632 157327 . - 0 ID=cds-WP_001297311.1;Parent=gene-AB25_RS19890;Dbxref=GenBank:WP_001297311.1;Name=WP_001297311.1;Ontology_term=GO:0006833,GO:0015250;gbkey=CDS;gene=aqpZ;go_function=water channel activity|0015250||IEA;go_process=water transport|0006833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415396.1;locus_tag=AB25_RS19890;product=aquaporin Z;protein_id=WP_001297311.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 157753 159411 . + . ID=gene-AB25_RS19885;Name=ybjD;gbkey=Gene;gene=ybjD;gene_biotype=protein_coding;locus_tag=AB25_RS19885;old_locus_tag=AB25_0990 NZ_JJMC01000016.1 Protein Homology CDS 157753 159411 . + 0 ID=cds-WP_000599806.1;Parent=gene-AB25_RS19885;Dbxref=GenBank:WP_000599806.1;Name=WP_000599806.1;gbkey=CDS;gene=ybjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706761.1;locus_tag=AB25_RS19885;product=ATP-dependent endonuclease;protein_id=WP_000599806.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 159408 160364 . - . ID=gene-AB25_RS19880;Name=ybjX;gbkey=Gene;gene=ybjX;gene_biotype=protein_coding;locus_tag=AB25_RS19880;old_locus_tag=AB25_0991 NZ_JJMC01000016.1 Protein Homology CDS 159408 160364 . - 0 ID=cds-WP_139304645.1;Parent=gene-AB25_RS19880;Dbxref=GenBank:WP_139304645.1;Name=WP_139304645.1;gbkey=CDS;gene=ybjX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001322270.1;locus_tag=AB25_RS19880;product=VirK/YbjX family protein;protein_id=WP_139304645.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 160515 161630 . + . ID=gene-AB25_RS19875;Name=macA;gbkey=Gene;gene=macA;gene_biotype=protein_coding;locus_tag=AB25_RS19875;old_locus_tag=AB25_0992 NZ_JJMC01000016.1 Protein Homology CDS 160515 161630 . + 0 ID=cds-WP_000746468.1;Parent=gene-AB25_RS19875;Dbxref=GenBank:WP_000746468.1;Name=WP_000746468.1;Ontology_term=GO:1990961,GO:0022857,GO:0019898,GO:1990195;gbkey=CDS;gene=macA;go_component=extrinsic component of membrane|0019898||IEA,macrolide transmembrane transporter complex|1990195||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308991.2;locus_tag=AB25_RS19875;product=macrolide transporter subunit MacA;protein_id=WP_000746468.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 161627 163573 . + . ID=gene-AB25_RS19870;Name=macB;gbkey=Gene;gene=macB;gene_biotype=protein_coding;locus_tag=AB25_RS19870;old_locus_tag=AB25_0993 NZ_JJMC01000016.1 Protein Homology CDS 161627 163573 . + 0 ID=cds-WP_000188182.1;Parent=gene-AB25_RS19870;Dbxref=GenBank:WP_000188182.1;Name=WP_000188182.1;Ontology_term=GO:0005524,GO:0022857,GO:1990195;gbkey=CDS;gene=macB;go_component=macrolide transmembrane transporter complex|1990195||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308992.1;locus_tag=AB25_RS19870;product=macrolide ABC transporter ATP-binding protein/permease MacB;protein_id=WP_000188182.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 163646 163870 . - . ID=gene-AB25_RS19865;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=AB25_RS19865;old_locus_tag=AB25_0994 NZ_JJMC01000016.1 Protein Homology CDS 163646 163870 . - 0 ID=cds-WP_000410785.1;Parent=gene-AB25_RS19865;Dbxref=GenBank:WP_000410785.1;Name=WP_000410785.1;gbkey=CDS;gene=cspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308993.1;locus_tag=AB25_RS19865;product=cold shock-like protein CspD;protein_id=WP_000410785.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 164020 164094 . + . ID=gene-AB25_RS32230;Name=yljB;gbkey=Gene;gene=yljB;gene_biotype=protein_coding;locus_tag=AB25_RS32230 NZ_JJMC01000016.1 Protein Homology CDS 164020 164094 . + 0 ID=cds-WP_001406719.1;Parent=gene-AB25_RS32230;Dbxref=GenBank:WP_001406719.1;Name=WP_001406719.1;gbkey=CDS;gene=yljB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051179.1;locus_tag=AB25_RS32230;product=protein YljB;protein_id=WP_001406719.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 164193 164513 . + . ID=gene-AB25_RS19860;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=AB25_RS19860;old_locus_tag=AB25_0995 NZ_JJMC01000016.1 Protein Homology CDS 164193 164513 . + 0 ID=cds-WP_000520781.1;Parent=gene-AB25_RS19860;Dbxref=GenBank:WP_000520781.1;Name=WP_000520781.1;Ontology_term=GO:0006508;gbkey=CDS;gene=clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128368.1;locus_tag=AB25_RS19860;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_000520781.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 164544 166820 . + . ID=gene-AB25_RS19855;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=AB25_RS19855;old_locus_tag=AB25_0996 NZ_JJMC01000016.1 Protein Homology CDS 164544 166820 . + 0 ID=cds-WP_000934041.1;Parent=gene-AB25_RS19855;Dbxref=GenBank:WP_000934041.1;Name=WP_000934041.1;Ontology_term=GO:0043335,GO:0005524,GO:0016887;gbkey=CDS;gene=clpA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308995.1;locus_tag=AB25_RS19855;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_000934041.1;transl_table=11 NZ_JJMC01000016.1 RefSeq gene 167338 168423 . + . ID=gene-AB25_RS19850;Name=AB25_RS19850;end_range=168423,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS19850;old_locus_tag=AB25_0997;partial=true NZ_JJMC01000016.1 Protein Homology CDS 167338 168423 . + 0 ID=cds-WP_032295873.1;Parent=gene-AB25_RS19850;Dbxref=GenBank:WP_032295873.1;Name=WP_032295873.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=168423,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309326.1;locus_tag=AB25_RS19850;partial=true;product=tyrosine-type recombinase/integrase;protein_id=WP_032295873.1;transl_table=11 ##sequence-region NZ_JJMC01000017.1 1 129294 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000017.1 RefSeq region 1 129294 . + . ID=NZ_JJMC01000017.1:1..129294;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000017.1 RefSeq gene 1 689 . + . ID=gene-AB25_RS19845;Name=AB25_RS19845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS19845;old_locus_tag=AB25_0998;partial=true;start_range=.,1 NZ_JJMC01000017.1 Protein Homology CDS 1 689 . + 2 ID=cds-WP_032295875.1;Parent=gene-AB25_RS19845;Dbxref=GenBank:WP_032295875.1;Name=WP_032295875.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309422.1;locus_tag=AB25_RS19845;partial=true;product=GTPase family protein;protein_id=WP_032295875.1;start_range=.,1;transl_table=11 NZ_JJMC01000017.1 RefSeq pseudogene 1062 1217 . + . ID=gene-AB25_RS27335;Name=AB25_RS27335;end_range=1217,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS27335;old_locus_tag=AB25_1000;partial=true;pseudo=true NZ_JJMC01000017.1 Protein Homology CDS 1062 1217 . + 0 ID=cds-AB25_RS27335;Parent=gene-AB25_RS27335;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1217,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309423.1;locus_tag=AB25_RS27335;partial=true;product=ESPR domain-containing protein;pseudo=true;transl_table=11 NZ_JJMC01000017.1 RefSeq pseudogene 1199 1471 . + . ID=gene-AB25_RS0124750;Name=AB25_RS0124750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS0124750;partial=true;pseudo=true;start_range=.,1199 NZ_JJMC01000017.1 Protein Homology CDS 1199 1471 . + 0 ID=cds-AB25_RS0124750;Parent=gene-AB25_RS0124750;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0051495;gbkey=CDS;go_process=positive regulation of cytoskeleton organization|0051495||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309432.1;locus_tag=AB25_RS0124750;partial=true;product=type IV toxin-antitoxin system YeeU family antitoxin;pseudo=true;start_range=.,1199;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 1518 1892 . + . ID=gene-AB25_RS19840;Name=AB25_RS19840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS19840;old_locus_tag=AB25_1002 NZ_JJMC01000017.1 Protein Homology CDS 1518 1892 . + 0 ID=cds-WP_000854914.1;Parent=gene-AB25_RS19840;Dbxref=GenBank:WP_000854914.1;Name=WP_000854914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309433.1;locus_tag=AB25_RS19840;product=TA system toxin CbtA family protein;protein_id=WP_000854914.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 1889 2380 . + . ID=gene-AB25_RS19835;Name=AB25_RS19835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS19835;old_locus_tag=AB25_1003 NZ_JJMC01000017.1 Protein Homology CDS 1889 2380 . + 0 ID=cds-WP_000976857.1;Parent=gene-AB25_RS19835;Dbxref=GenBank:WP_000976857.1;Name=WP_000976857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309434.3;locus_tag=AB25_RS19835;product=DUF5983 family protein;protein_id=WP_000976857.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 2392 2589 . + . ID=gene-AB25_RS19830;Name=AB25_RS19830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS19830;old_locus_tag=AB25_1004 NZ_JJMC01000017.1 Protein Homology CDS 2392 2589 . + 0 ID=cds-WP_000839282.1;Parent=gene-AB25_RS19830;Dbxref=GenBank:WP_000839282.1;Name=WP_000839282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309435.1;locus_tag=AB25_RS19830;product=DUF957 domain-containing protein;protein_id=WP_000839282.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 2674 3516 . + . ID=gene-AB25_RS19825;Name=AB25_RS19825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS19825;old_locus_tag=AB25_1005 NZ_JJMC01000017.1 Protein Homology CDS 2674 3516 . + 0 ID=cds-WP_001280481.1;Parent=gene-AB25_RS19825;Dbxref=GenBank:WP_001280481.1;Name=WP_001280481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309436.1;locus_tag=AB25_RS19825;product=DUF4942 domain-containing protein;protein_id=WP_001280481.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 3666 3753 . - . ID=gene-AB25_RS19820;Name=AB25_RS19820;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS19820;old_locus_tag=AB25_1006 NZ_JJMC01000017.1 tRNAscan-SE tRNA 3666 3753 . - . ID=rna-AB25_RS19820;Parent=gene-AB25_RS19820;anticodon=(pos:complement(3717..3719));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS19820;product=tRNA-Ser NZ_JJMC01000017.1 tRNAscan-SE exon 3666 3753 . - . ID=exon-AB25_RS19820-1;Parent=rna-AB25_RS19820;anticodon=(pos:complement(3717..3719));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS19820;product=tRNA-Ser NZ_JJMC01000017.1 RefSeq gene 4007 4225 . - . ID=gene-AB25_RS19815;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=AB25_RS19815;old_locus_tag=AB25_1007 NZ_JJMC01000017.1 Protein Homology CDS 4007 4225 . - 0 ID=cds-WP_001040187.1;Parent=gene-AB25_RS19815;Dbxref=GenBank:WP_001040187.1;Name=WP_001040187.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=AB25_RS19815;product=translation initiation factor IF-1;protein_id=WP_001040187.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 4510 5214 . - . ID=gene-AB25_RS19810;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=AB25_RS19810;old_locus_tag=AB25_1008 NZ_JJMC01000017.1 Protein Homology CDS 4510 5214 . - 0 ID=cds-WP_001634241.1;Parent=gene-AB25_RS19810;Dbxref=GenBank:WP_001634241.1;Name=WP_001634241.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyl-tRNA--protein transferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415405.1;locus_tag=AB25_RS19810;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_001634241.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 5256 6977 . - . ID=gene-AB25_RS19805;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=AB25_RS19805;old_locus_tag=AB25_1009 NZ_JJMC01000017.1 Protein Homology CDS 5256 6977 . - 0 ID=cds-WP_001202188.1;Parent=gene-AB25_RS19805;Dbxref=GenBank:WP_001202188.1;Name=WP_001202188.1;Ontology_term=GO:0045454,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415406.1;locus_tag=AB25_RS19805;product=heme ABC transporter ATP-binding protein/permease CydC;protein_id=WP_001202188.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 6978 8744 . - . ID=gene-AB25_RS19800;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=AB25_RS19800;old_locus_tag=AB25_1010 NZ_JJMC01000017.1 Protein Homology CDS 6978 8744 . - 0 ID=cds-WP_001043619.1;Parent=gene-AB25_RS19800;Dbxref=GenBank:WP_001043619.1;Name=WP_001043619.1;Ontology_term=GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308999.1;locus_tag=AB25_RS19800;product=heme ABC transporter permease/ATP-binding protein CydD;protein_id=WP_001043619.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 8867 9832 . - . ID=gene-AB25_RS19795;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=AB25_RS19795;old_locus_tag=AB25_1011 NZ_JJMC01000017.1 Protein Homology CDS 8867 9832 . - 0 ID=cds-WP_000537418.1;Parent=gene-AB25_RS19795;Dbxref=GenBank:WP_000537418.1;Name=WP_000537418.1;Ontology_term=GO:0019430,GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309000.1;locus_tag=AB25_RS19795;product=thioredoxin-disulfide reductase;protein_id=WP_000537418.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 10376 10870 . + . ID=gene-AB25_RS19790;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=AB25_RS19790;old_locus_tag=AB25_1013 NZ_JJMC01000017.1 Protein Homology CDS 10376 10870 . + 0 ID=cds-WP_000228473.1;Parent=gene-AB25_RS19790;Dbxref=GenBank:WP_000228473.1;Name=WP_000228473.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001591745.1;locus_tag=AB25_RS19790;product=leucine-responsive transcriptional regulator Lrp;protein_id=WP_000228473.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 11005 15111 . + . ID=gene-AB25_RS19785;Name=ftsK;gbkey=Gene;gene=ftsK;gene_biotype=protein_coding;locus_tag=AB25_RS19785;old_locus_tag=AB25_1014 NZ_JJMC01000017.1 Protein Homology CDS 11005 15111 . + 0 ID=cds-WP_000077063.1;Parent=gene-AB25_RS19785;Dbxref=GenBank:WP_000077063.1;Name=WP_000077063.1;Ontology_term=GO:0003677,GO:0005524;gbkey=CDS;gene=ftsK;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415410.1;locus_tag=AB25_RS19785;product=DNA translocase FtsK;protein_id=WP_000077063.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 15266 15877 . + . ID=gene-AB25_RS19780;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=AB25_RS19780;old_locus_tag=AB25_1015 NZ_JJMC01000017.1 Protein Homology CDS 15266 15877 . + 0 ID=cds-WP_001295343.1;Parent=gene-AB25_RS19780;Dbxref=GenBank:WP_001295343.1;Name=WP_001295343.1;Ontology_term=GO:0042953,GO:0042597;gbkey=CDS;gene=lolA;go_component=periplasmic space|0042597||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010354356.1;locus_tag=AB25_RS19780;product=outer membrane lipoprotein chaperone LolA;protein_id=WP_001295343.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 15888 17231 . + . ID=gene-AB25_RS19775;Name=rarA;gbkey=Gene;gene=rarA;gene_biotype=protein_coding;gene_synonym=mgsA;locus_tag=AB25_RS19775;old_locus_tag=AB25_1016 NZ_JJMC01000017.1 Protein Homology CDS 15888 17231 . + 0 ID=cds-WP_000067755.1;Parent=gene-AB25_RS19775;Dbxref=GenBank:WP_000067755.1;Name=WP_000067755.1;gbkey=CDS;gene=rarA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309004.1;locus_tag=AB25_RS19775;product=replication-associated recombination protein RarA;protein_id=WP_000067755.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 17322 18614 . + . ID=gene-AB25_RS19770;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=AB25_RS19770;old_locus_tag=AB25_1017 NZ_JJMC01000017.1 Protein Homology CDS 17322 18614 . + 0 ID=cds-WP_000886683.1;Parent=gene-AB25_RS19770;Dbxref=GenBank:WP_000886683.1;Name=WP_000886683.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887397.1;locus_tag=AB25_RS19770;product=serine--tRNA ligase;protein_id=WP_000886683.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 18853 21297 . + . ID=gene-AB25_RS19765;Name=dmsA;gbkey=Gene;gene=dmsA;gene_biotype=protein_coding;locus_tag=AB25_RS19765;old_locus_tag=AB25_1018 NZ_JJMC01000017.1 Protein Homology CDS 18853 21297 . + 0 ID=cds-WP_000850315.1;Parent=gene-AB25_RS19765;Dbxref=GenBank:WP_000850315.1;Name=WP_000850315.1;Ontology_term=GO:0009389,GO:0030151;gbkey=CDS;gene=dmsA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415414.4;locus_tag=AB25_RS19765;product=dimethylsulfoxide reductase subunit A;protein_id=WP_000850315.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 21308 21925 . + . ID=gene-AB25_RS19760;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=AB25_RS19760;old_locus_tag=AB25_1019 NZ_JJMC01000017.1 Protein Homology CDS 21308 21925 . + 0 ID=cds-WP_000213098.1;Parent=gene-AB25_RS19760;Dbxref=GenBank:WP_000213098.1;Name=WP_000213098.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=AB25_RS19760;product=dimethylsulfoxide reductase iron-sulfur subunit DmsB;protein_id=WP_000213098.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 21927 22790 . + . ID=gene-AB25_RS19755;Name=dmsC;gbkey=Gene;gene=dmsC;gene_biotype=protein_coding;locus_tag=AB25_RS19755;old_locus_tag=AB25_1020 NZ_JJMC01000017.1 Protein Homology CDS 21927 22790 . + 0 ID=cds-WP_000534637.1;Parent=gene-AB25_RS19755;Dbxref=GenBank:WP_000534637.1;Name=WP_000534637.1;gbkey=CDS;gene=dmsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415416.1;locus_tag=AB25_RS19755;product=dimethyl sulfoxide reductase anchor subunit DmsC;protein_id=WP_000534637.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 22826 23452 . - . ID=gene-AB25_RS19750;Name=ycaC;gbkey=Gene;gene=ycaC;gene_biotype=protein_coding;locus_tag=AB25_RS19750;old_locus_tag=AB25_1021 NZ_JJMC01000017.1 Protein Homology CDS 22826 23452 . - 0 ID=cds-WP_000165880.1;Parent=gene-AB25_RS19750;Dbxref=GenBank:WP_000165880.1;Name=WP_000165880.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ycaC;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309009.1;locus_tag=AB25_RS19750;product=isochorismate family cysteine hydrolase YcaC;protein_id=WP_000165880.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 23766 24914 . + . ID=gene-AB25_RS19745;Name=ycaD;gbkey=Gene;gene=ycaD;gene_biotype=protein_coding;locus_tag=AB25_RS19745;old_locus_tag=AB25_1023 NZ_JJMC01000017.1 Protein Homology CDS 23766 24914 . + 0 ID=cds-WP_000109295.1;Parent=gene-AB25_RS19745;Dbxref=GenBank:WP_000109295.1;Name=WP_000109295.1;gbkey=CDS;gene=ycaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309010.1;locus_tag=AB25_RS19745;product=MFS transporter;protein_id=WP_000109295.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 25124 26554 . + . ID=gene-AB25_RS19740;Name=ycaM;gbkey=Gene;gene=ycaM;gene_biotype=protein_coding;locus_tag=AB25_RS19740;old_locus_tag=AB25_1024 NZ_JJMC01000017.1 Protein Homology CDS 25124 26554 . + 0 ID=cds-WP_000918536.1;Parent=gene-AB25_RS19740;Dbxref=GenBank:WP_000918536.1;Name=WP_000918536.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;gene=ycaM;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415419.2;locus_tag=AB25_RS19740;product=APC family permease;protein_id=WP_000918536.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 26555 27463 . - . ID=gene-AB25_RS19735;Name=ycaN;gbkey=Gene;gene=ycaN;gene_biotype=protein_coding;locus_tag=AB25_RS19735;old_locus_tag=AB25_1025 NZ_JJMC01000017.1 Protein Homology CDS 26555 27463 . - 0 ID=cds-WP_032170637.1;Parent=gene-AB25_RS19735;Dbxref=GenBank:WP_032170637.1;Name=WP_032170637.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=ycaN;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415420.1;locus_tag=AB25_RS19735;product=LysR family transcriptional regulator;protein_id=WP_032170637.1;transl_table=11 NZ_JJMC01000017.1 RefSeq pseudogene 27563 28152 . + . ID=gene-AB25_RS0124755;Name=ycaK;gbkey=Gene;gene=ycaK;gene_biotype=pseudogene;locus_tag=AB25_RS0124755;old_locus_tag=AB25_1026;pseudo=true NZ_JJMC01000017.1 Protein Homology CDS 27563 28152 . + 0 ID=cds-AB25_RS0124755;Parent=gene-AB25_RS0124755;Note=frameshifted;gbkey=CDS;gene=ycaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415421.1;locus_tag=AB25_RS0124755;product=NAD(P)H oxidoreductase;pseudo=true;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 28234 28974 . - . ID=gene-AB25_RS19730;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=AB25_RS19730;old_locus_tag=AB25_1028 NZ_JJMC01000017.1 Protein Homology CDS 28234 28974 . - 0 ID=cds-WP_000111043.1;Parent=gene-AB25_RS19730;Dbxref=GenBank:WP_000111043.1;Name=WP_000111043.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309012.1;locus_tag=AB25_RS19730;product=pyruvate formate lyase 1-activating protein;protein_id=WP_000111043.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 29166 31448 . - . ID=gene-AB25_RS19725;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=AB25_RS19725;old_locus_tag=AB25_1029 NZ_JJMC01000017.1 Protein Homology CDS 29166 31448 . - 0 ID=cds-WP_001292815.1;Parent=gene-AB25_RS19725;Dbxref=GenBank:WP_001292815.1;Name=WP_001292815.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706821.1;locus_tag=AB25_RS19725;product=formate C-acetyltransferase;protein_id=WP_001292815.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 31503 32360 . - . ID=gene-AB25_RS31005;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=AB25_RS31005;old_locus_tag=AB25_1030 NZ_JJMC01000017.1 Protein Homology CDS 31503 32360 . - 0 ID=cds-WP_000642546.1;Parent=gene-AB25_RS31005;Dbxref=GenBank:WP_000642546.1;Name=WP_000642546.1;gbkey=CDS;gene=focA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309014.1;locus_tag=AB25_RS31005;product=formate transporter FocA;protein_id=WP_000642546.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 32766 34526 . - . ID=gene-AB25_RS19715;Name=ycaO;gbkey=Gene;gene=ycaO;gene_biotype=protein_coding;locus_tag=AB25_RS19715;old_locus_tag=AB25_1031 NZ_JJMC01000017.1 Protein Homology CDS 32766 34526 . - 0 ID=cds-WP_001297197.1;Parent=gene-AB25_RS19715;Dbxref=GenBank:WP_001297197.1;Name=WP_001297197.1;gbkey=CDS;gene=ycaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415425.4;locus_tag=AB25_RS19715;product=30S ribosomal protein S12 methylthiotransferase accessory factor YcaO;protein_id=WP_001297197.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 34656 35348 . + . ID=gene-AB25_RS19710;Name=ycaP;gbkey=Gene;gene=ycaP;gene_biotype=protein_coding;locus_tag=AB25_RS19710;old_locus_tag=AB25_1032 NZ_JJMC01000017.1 Protein Homology CDS 34656 35348 . + 0 ID=cds-WP_000642849.1;Parent=gene-AB25_RS19710;Dbxref=GenBank:WP_000642849.1;Name=WP_000642849.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ycaP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415426.1;locus_tag=AB25_RS19710;product=DUF421 domain-containing protein;protein_id=WP_000642849.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 35547 36635 . + . ID=gene-AB25_RS19705;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=AB25_RS19705;old_locus_tag=AB25_1033 NZ_JJMC01000017.1 Protein Homology CDS 35547 36635 . + 0 ID=cds-WP_000057147.1;Parent=gene-AB25_RS19705;Dbxref=GenBank:WP_000057147.1;Name=WP_000057147.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706825.1;locus_tag=AB25_RS19705;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_000057147.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 36706 37989 . + . ID=gene-AB25_RS19700;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=AB25_RS19700;old_locus_tag=AB25_1034 NZ_JJMC01000017.1 Protein Homology CDS 36706 37989 . + 0 ID=cds-WP_000445231.1;Parent=gene-AB25_RS19700;Dbxref=GenBank:WP_000445231.1;Name=WP_000445231.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309018.1;locus_tag=AB25_RS19700;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_000445231.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 38158 38922 . + . ID=gene-AB25_RS19695;Name=ycaL;gbkey=Gene;gene=ycaL;gene_biotype=protein_coding;locus_tag=AB25_RS19695;old_locus_tag=AB25_1035 NZ_JJMC01000017.1 Protein Homology CDS 38158 38922 . + 0 ID=cds-WP_001295345.1;Parent=gene-AB25_RS19695;Dbxref=GenBank:WP_001295345.1;Name=WP_001295345.1;gbkey=CDS;gene=ycaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706828.2;locus_tag=AB25_RS19695;product=metallopeptidase YcaL;protein_id=WP_001295345.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 39095 39778 . + . ID=gene-AB25_RS19690;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=AB25_RS19690;old_locus_tag=AB25_1036 NZ_JJMC01000017.1 Protein Homology CDS 39095 39778 . + 0 ID=cds-WP_000125016.1;Parent=gene-AB25_RS19690;Dbxref=GenBank:WP_000125016.1;Name=WP_000125016.1;Ontology_term=GO:0015949,GO:0004127,GO:0005524;gbkey=CDS;gene=cmk;go_function=(d)CMP kinase activity|0004127||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125007.1;locus_tag=AB25_RS19690;product=(d)CMP kinase;protein_id=WP_000125016.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 39889 41562 . + . ID=gene-AB25_RS19685;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=AB25_RS19685;old_locus_tag=AB25_1037 NZ_JJMC01000017.1 Protein Homology CDS 39889 41562 . + 0 ID=cds-WP_000140327.1;Parent=gene-AB25_RS19685;Dbxref=GenBank:WP_000140327.1;Name=WP_000140327.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=AB25_RS19685;product=30S ribosomal protein S1;protein_id=WP_000140327.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 41722 42006 . + . ID=gene-AB25_RS19680;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=AB25_RS19680;old_locus_tag=AB25_1038 NZ_JJMC01000017.1 Protein Homology CDS 41722 42006 . + 0 ID=cds-WP_000167336.1;Parent=gene-AB25_RS19680;Dbxref=GenBank:WP_000167336.1;Name=WP_000167336.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677,GO:0005694;gbkey=CDS;gene=ihfB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819309.1;locus_tag=AB25_RS19680;product=integration host factor subunit beta;protein_id=WP_000167336.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 42213 44477 . + . ID=gene-AB25_RS19675;Name=ycaI;gbkey=Gene;gene=ycaI;gene_biotype=protein_coding;locus_tag=AB25_RS19675;old_locus_tag=AB25_1039 NZ_JJMC01000017.1 Protein Homology CDS 42213 44477 . + 0 ID=cds-WP_000705679.1;Parent=gene-AB25_RS19675;Dbxref=GenBank:WP_000705679.1;Name=WP_000705679.1;Ontology_term=GO:0030420,GO:0016020;gbkey=CDS;gene=ycaI;go_component=membrane|0016020||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415433.4;locus_tag=AB25_RS19675;product=ComEC family protein;protein_id=WP_000705679.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 44514 46262 . + . ID=gene-AB25_RS19670;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=AB25_RS19670;old_locus_tag=AB25_1040 NZ_JJMC01000017.1 Protein Homology CDS 44514 46262 . + 0 ID=cds-WP_000551270.1;Parent=gene-AB25_RS19670;Dbxref=GenBank:WP_000551270.1;Name=WP_000551270.1;Ontology_term=GO:0055085,GO:0005524,GO:0034040,GO:0140359,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309024.1;locus_tag=AB25_RS19670;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=WP_000551270.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 46259 47245 . + . ID=gene-AB25_RS19665;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=AB25_RS19665;old_locus_tag=AB25_1041 NZ_JJMC01000017.1 Protein Homology CDS 46259 47245 . + 0 ID=cds-WP_000570540.1;Parent=gene-AB25_RS19665;Dbxref=GenBank:WP_000570540.1;Name=WP_000570540.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706833.1;locus_tag=AB25_RS19665;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_000570540.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 47282 48514 . + . ID=gene-AB25_RS19660;Name=ycaQ;gbkey=Gene;gene=ycaQ;gene_biotype=protein_coding;locus_tag=AB25_RS19660;old_locus_tag=AB25_1042 NZ_JJMC01000017.1 Protein Homology CDS 47282 48514 . + 0 ID=cds-WP_032170638.1;Parent=gene-AB25_RS19660;Dbxref=GenBank:WP_032170638.1;Name=WP_032170638.1;gbkey=CDS;gene=ycaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706834.1;locus_tag=AB25_RS19660;product=crosslink repair DNA glycosylase YcaQ;protein_id=WP_032170638.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 48566 48748 . + . ID=gene-AB25_RS19655;Name=ycaR;gbkey=Gene;gene=ycaR;gene_biotype=protein_coding;locus_tag=AB25_RS19655;old_locus_tag=AB25_1043 NZ_JJMC01000017.1 Protein Homology CDS 48566 48748 . + 0 ID=cds-WP_000350058.1;Parent=gene-AB25_RS19655;Dbxref=GenBank:WP_000350058.1;Name=WP_000350058.1;gbkey=CDS;gene=ycaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309027.1;locus_tag=AB25_RS19655;product=protein YcaR;protein_id=WP_000350058.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 48745 49491 . + . ID=gene-AB25_RS19650;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=AB25_RS19650;old_locus_tag=AB25_1044 NZ_JJMC01000017.1 Protein Homology CDS 48745 49491 . + 0 ID=cds-WP_000011616.1;Parent=gene-AB25_RS19650;Dbxref=GenBank:WP_000011616.1;Name=WP_000011616.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415438.1;locus_tag=AB25_RS19650;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_000011616.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 49645 50538 . + . ID=gene-AB25_RS19645;Name=ycbJ;gbkey=Gene;gene=ycbJ;gene_biotype=protein_coding;locus_tag=AB25_RS19645;old_locus_tag=AB25_1045 NZ_JJMC01000017.1 Protein Homology CDS 49645 50538 . + 0 ID=cds-WP_000436922.1;Parent=gene-AB25_RS19645;Dbxref=GenBank:WP_000436922.1;Name=WP_000436922.1;gbkey=CDS;gene=ycbJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309029.1;locus_tag=AB25_RS19645;product=YcbJ family phosphotransferase;protein_id=WP_000436922.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 50515 51294 . - . ID=gene-AB25_RS19640;Name=elyC;gbkey=Gene;gene=elyC;gene_biotype=protein_coding;locus_tag=AB25_RS19640;old_locus_tag=AB25_1046 NZ_JJMC01000017.1 Protein Homology CDS 50515 51294 . - 0 ID=cds-WP_000899599.1;Parent=gene-AB25_RS19640;Dbxref=GenBank:WP_000899599.1;Name=WP_000899599.1;gbkey=CDS;gene=elyC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706838.2;locus_tag=AB25_RS19640;product=envelope biogenesis factor ElyC;protein_id=WP_000899599.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 51430 52215 . + . ID=gene-AB25_RS19635;Name=cmoM;gbkey=Gene;gene=cmoM;gene_biotype=protein_coding;locus_tag=AB25_RS19635;old_locus_tag=AB25_1047 NZ_JJMC01000017.1 Protein Homology CDS 51430 52215 . + 0 ID=cds-WP_032170639.1;Parent=gene-AB25_RS19635;Dbxref=GenBank:WP_032170639.1;Name=WP_032170639.1;gbkey=CDS;gene=cmoM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415441.1;locus_tag=AB25_RS19635;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;protein_id=WP_032170639.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 52212 53534 . + . ID=gene-AB25_RS19630;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=AB25_RS19630;old_locus_tag=AB25_1048 NZ_JJMC01000017.1 Protein Homology CDS 52212 53534 . + 0 ID=cds-WP_001288850.1;Parent=gene-AB25_RS19630;Dbxref=GenBank:WP_001288850.1;Name=WP_001288850.1;Ontology_term=GO:0007059,GO:0005509;gbkey=CDS;gene=mukF;go_function=calcium ion binding|0005509||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=AB25_RS19630;product=chromosome partition protein MukF;protein_id=WP_001288850.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 53515 54219 . + . ID=gene-AB25_RS19625;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=AB25_RS19625;old_locus_tag=AB25_1049 NZ_JJMC01000017.1 Protein Homology CDS 53515 54219 . + 0 ID=cds-WP_001295347.1;Parent=gene-AB25_RS19625;Dbxref=GenBank:WP_001295347.1;Name=WP_001295347.1;Ontology_term=GO:0007059,GO:0030261;gbkey=CDS;gene=mukE;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415443.2;locus_tag=AB25_RS19625;product=chromosome partition protein MukE;protein_id=WP_001295347.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 54219 58679 . + . ID=gene-AB25_RS19620;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=AB25_RS19620;old_locus_tag=AB25_1050 NZ_JJMC01000017.1 Protein Homology CDS 54219 58679 . + 0 ID=cds-WP_000572668.1;Parent=gene-AB25_RS19620;Dbxref=GenBank:WP_000572668.1;Name=WP_000572668.1;Ontology_term=GO:0007059,GO:0030261,GO:0003677;gbkey=CDS;gene=mukB;go_function=DNA binding|0003677||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309034.1;locus_tag=AB25_RS19620;product=chromosome partition protein MukB;protein_id=WP_000572668.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 58940 60787 . + . ID=gene-AB25_RS19615;Name=ldtD;gbkey=Gene;gene=ldtD;gene_biotype=protein_coding;locus_tag=AB25_RS19615;old_locus_tag=AB25_1051 NZ_JJMC01000017.1 Protein Homology CDS 58940 60787 . + 0 ID=cds-WP_000925972.1;Parent=gene-AB25_RS19615;Dbxref=GenBank:WP_000925972.1;Name=WP_000925972.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415445.1;locus_tag=AB25_RS19615;product=L%2CD-transpeptidase;protein_id=WP_000925972.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 60968 61516 . + . ID=gene-AB25_RS19610;Name=mepK;gbkey=Gene;gene=mepK;gene_biotype=protein_coding;locus_tag=AB25_RS19610;old_locus_tag=AB25_1052 NZ_JJMC01000017.1 Protein Homology CDS 60968 61516 . + 0 ID=cds-WP_001295932.1;Parent=gene-AB25_RS19610;Dbxref=GenBank:WP_001295932.1;Name=WP_001295932.1;gbkey=CDS;gene=mepK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309036.1;locus_tag=AB25_RS19610;product=YcbK family protein;protein_id=WP_001295932.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 61543 62190 . + . ID=gene-AB25_RS19605;Name=gloC;gbkey=Gene;gene=gloC;gene_biotype=protein_coding;locus_tag=AB25_RS19605;old_locus_tag=AB25_1053 NZ_JJMC01000017.1 Protein Homology CDS 61543 62190 . + 0 ID=cds-WP_001467001.1;Parent=gene-AB25_RS19605;Dbxref=GenBank:WP_001467001.1;Name=WP_001467001.1;gbkey=CDS;gene=gloC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035823.1;locus_tag=AB25_RS19605;product=hydroxyacylglutathione hydrolase GloC;protein_id=WP_001467001.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 62412 63602 . - . ID=gene-AB25_RS19600;Name=aspC;gbkey=Gene;gene=aspC;gene_biotype=protein_coding;locus_tag=AB25_RS19600;old_locus_tag=AB25_1054 NZ_JJMC01000017.1 Protein Homology CDS 62412 63602 . - 0 ID=cds-WP_000462687.1;Parent=gene-AB25_RS19600;Dbxref=GenBank:WP_000462687.1;Name=WP_000462687.1;gbkey=CDS;gene=aspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653304.1;locus_tag=AB25_RS19600;product=aspartate transaminase;protein_id=WP_000462687.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 63787 64875 . - . ID=gene-AB25_RS19595;Name=ompF;gbkey=Gene;gene=ompF;gene_biotype=protein_coding;locus_tag=AB25_RS19595;old_locus_tag=AB25_1055 NZ_JJMC01000017.1 Protein Homology CDS 63787 64875 . - 0 ID=cds-WP_000977920.1;Parent=gene-AB25_RS19595;Dbxref=GenBank:WP_000977920.1;Name=WP_000977920.1;gbkey=CDS;gene=ompF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415449.1;locus_tag=AB25_RS19595;product=porin OmpF;protein_id=WP_000977920.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 65477 66877 . - . ID=gene-AB25_RS19590;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=AB25_RS19590;old_locus_tag=AB25_1057 NZ_JJMC01000017.1 Protein Homology CDS 65477 66877 . - 0 ID=cds-WP_000117881.1;Parent=gene-AB25_RS19590;Dbxref=GenBank:WP_000117881.1;Name=WP_000117881.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1;locus_tag=AB25_RS19590;product=asparagine--tRNA ligase;protein_id=WP_000117881.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 67046 68248 . - . ID=gene-AB25_RS19585;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=AB25_RS19585;old_locus_tag=AB25_1058 NZ_JJMC01000017.1 Protein Homology CDS 67046 68248 . - 0 ID=cds-WP_001297200.1;Parent=gene-AB25_RS19585;Dbxref=GenBank:WP_001297200.1;Name=WP_001297200.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706850.2;locus_tag=AB25_RS19585;product=nicotinate phosphoribosyltransferase;protein_id=WP_001297200.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 68514 71126 . + . ID=gene-AB25_RS19580;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=AB25_RS19580;old_locus_tag=AB25_1060 NZ_JJMC01000017.1 Protein Homology CDS 68514 71126 . + 0 ID=cds-WP_000193859.1;Parent=gene-AB25_RS19580;Dbxref=GenBank:WP_000193859.1;Name=WP_000193859.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237,GO:0008270;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193787.1;locus_tag=AB25_RS19580;product=aminopeptidase N;protein_id=WP_000193859.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 71333 72100 . - . ID=gene-AB25_RS19575;Name=ssuB;gbkey=Gene;gene=ssuB;gene_biotype=protein_coding;locus_tag=AB25_RS19575;old_locus_tag=AB25_1061 NZ_JJMC01000017.1 Protein Homology CDS 71333 72100 . - 0 ID=cds-WP_001090514.1;Parent=gene-AB25_RS19575;Dbxref=GenBank:WP_001090514.1;Name=WP_001090514.1;Ontology_term=GO:0005524;gbkey=CDS;gene=ssuB;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706852.1;locus_tag=AB25_RS19575;product=aliphatic sulfonates ABC transporter ATP-binding protein;protein_id=WP_001090514.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 72097 72888 . - . ID=gene-AB25_RS19570;Name=ssuC;gbkey=Gene;gene=ssuC;gene_biotype=protein_coding;locus_tag=AB25_RS19570;old_locus_tag=AB25_1062 NZ_JJMC01000017.1 Protein Homology CDS 72097 72888 . - 0 ID=cds-WP_000235203.1;Parent=gene-AB25_RS19570;Dbxref=GenBank:WP_000235203.1;Name=WP_000235203.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=ssuC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415454.4;locus_tag=AB25_RS19570;product=aliphatic sulfonate ABC transporter permease SsuC;protein_id=WP_000235203.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 72899 74044 . - . ID=gene-AB25_RS19565;Name=ssuD;gbkey=Gene;gene=ssuD;gene_biotype=protein_coding;locus_tag=AB25_RS19565;old_locus_tag=AB25_1063 NZ_JJMC01000017.1 Protein Homology CDS 72899 74044 . - 0 ID=cds-WP_000055996.1;Parent=gene-AB25_RS19565;Dbxref=GenBank:WP_000055996.1;Name=WP_000055996.1;Ontology_term=GO:0006790,GO:0008726,GO:0010181;gbkey=CDS;gene=ssuD;go_function=alkanesulfonate monooxygenase activity|0008726||IEA,FMN binding|0010181||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706856.1;locus_tag=AB25_RS19565;product=FMNH2-dependent alkanesulfonate monooxygenase;protein_id=WP_000055996.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 74041 75000 . - . ID=gene-AB25_RS19560;Name=ssuA;gbkey=Gene;gene=ssuA;gene_biotype=protein_coding;locus_tag=AB25_RS19560;old_locus_tag=AB25_1064 NZ_JJMC01000017.1 Protein Homology CDS 74041 75000 . - 0 ID=cds-WP_001244343.1;Parent=gene-AB25_RS19560;Dbxref=GenBank:WP_001244343.1;Name=WP_001244343.1;gbkey=CDS;gene=ssuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309046.1;locus_tag=AB25_RS19560;product=aliphatic sulfonate ABC transporter substrate-binding protein SsuA;protein_id=WP_001244343.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 74993 75568 . - . ID=gene-AB25_RS19555;Name=ssuE;gbkey=Gene;gene=ssuE;gene_biotype=protein_coding;locus_tag=AB25_RS19555;old_locus_tag=AB25_1065 NZ_JJMC01000017.1 Protein Homology CDS 74993 75568 . - 0 ID=cds-WP_001263933.1;Parent=gene-AB25_RS19555;Dbxref=GenBank:WP_001263933.1;Name=WP_001263933.1;Ontology_term=GO:0046306,GO:0008752;gbkey=CDS;gene=ssuE;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA;go_process=alkanesulfonate catabolic process|0046306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415457.1;locus_tag=AB25_RS19555;product=NADPH-dependent FMN reductase;protein_id=WP_001263933.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 75924 76466 . + . ID=gene-AB25_RS19550;Name=AB25_RS19550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS19550;old_locus_tag=AB25_1066 NZ_JJMC01000017.1 Protein Homology CDS 75924 76466 . + 0 ID=cds-WP_000750284.1;Parent=gene-AB25_RS19550;Dbxref=GenBank:WP_000750284.1;Name=WP_000750284.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415458.2;locus_tag=AB25_RS19550;product=fimbrial protein;protein_id=WP_000750284.1;transl_table=11 NZ_JJMC01000017.1 RefSeq pseudogene 76549 77257 . + . ID=gene-AB25_RS0124765;Name=elfD;gbkey=Gene;gene=elfD;gene_biotype=pseudogene;locus_tag=AB25_RS0124765;old_locus_tag=AB25_1067;pseudo=true NZ_JJMC01000017.1 Protein Homology CDS 76549 77257 . + 0 ID=cds-AB25_RS0124765;Parent=gene-AB25_RS0124765;Note=frameshifted;Ontology_term=GO:0043711,GO:0061077,GO:0030288;gbkey=CDS;gene=elfD;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=pilus organization|0043711||IEA,chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415459.1;locus_tag=AB25_RS0124765;product=fimbrial biogenesis chaperone;pseudo=true;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 77282 79882 . + . ID=gene-AB25_RS19545;Name=elfC;gbkey=Gene;gene=elfC;gene_biotype=protein_coding;locus_tag=AB25_RS19545;old_locus_tag=AB25_1069 NZ_JJMC01000017.1 Protein Homology CDS 77282 79882 . + 0 ID=cds-WP_050439152.1;Parent=gene-AB25_RS19545;Dbxref=GenBank:WP_050439152.1;Name=WP_050439152.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;gene=elfC;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706863.2;locus_tag=AB25_RS19545;product=fimbrial biogenesis usher protein;protein_id=WP_050439152.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 79873 80943 . + . ID=gene-AB25_RS19540;Name=elfG;gbkey=Gene;gene=elfG;gene_biotype=protein_coding;locus_tag=AB25_RS19540;old_locus_tag=AB25_1070 NZ_JJMC01000017.1 Protein Homology CDS 79873 80943 . + 0 ID=cds-WP_001165655.1;Parent=gene-AB25_RS19540;Dbxref=GenBank:WP_001165655.1;Name=WP_001165655.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=elfG;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415461.1;locus_tag=AB25_RS19540;product=fimbrial protein;protein_id=WP_001165655.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 80955 81497 . + . ID=gene-AB25_RS19535;Name=ycbU;gbkey=Gene;gene=ycbU;gene_biotype=protein_coding;locus_tag=AB25_RS19535;old_locus_tag=AB25_1071 NZ_JJMC01000017.1 Protein Homology CDS 80955 81497 . + 0 ID=cds-WP_000730614.1;Parent=gene-AB25_RS19535;Dbxref=GenBank:WP_000730614.1;Name=WP_000730614.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=ycbU;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415462.1;locus_tag=AB25_RS19535;product=fimbrial protein;protein_id=WP_000730614.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 81505 82020 . + . ID=gene-AB25_RS19530;Name=ycbV;gbkey=Gene;gene=ycbV;gene_biotype=protein_coding;locus_tag=AB25_RS19530;old_locus_tag=AB25_1072 NZ_JJMC01000017.1 Protein Homology CDS 81505 82020 . + 0 ID=cds-WP_000919480.1;Parent=gene-AB25_RS19530;Dbxref=GenBank:WP_000919480.1;Name=WP_000919480.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=ycbV;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415463.2;locus_tag=AB25_RS19530;product=fimbrial protein;protein_id=WP_000919480.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 81986 82723 . + . ID=gene-AB25_RS19525;Name=ycbF;gbkey=Gene;gene=ycbF;gene_biotype=protein_coding;locus_tag=AB25_RS19525;old_locus_tag=AB25_1073 NZ_JJMC01000017.1 Protein Homology CDS 81986 82723 . + 0 ID=cds-WP_162752746.1;Parent=gene-AB25_RS19525;Dbxref=GenBank:WP_162752746.1;Name=WP_162752746.1;gbkey=CDS;gene=ycbF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706867.1;locus_tag=AB25_RS19525;product=fimbrial chaperone;protein_id=WP_162752746.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 82834 83844 . + . ID=gene-AB25_RS19520;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=AB25_RS19520;old_locus_tag=AB25_1074 NZ_JJMC01000017.1 Protein Homology CDS 82834 83844 . + 0 ID=cds-WP_001295352.1;Parent=gene-AB25_RS19520;Dbxref=GenBank:WP_001295352.1;Name=WP_001295352.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309056.1;locus_tag=AB25_RS19520;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_001295352.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 84018 84560 . + . ID=gene-AB25_RS19515;Name=zapC;gbkey=Gene;gene=zapC;gene_biotype=protein_coding;locus_tag=AB25_RS19515;old_locus_tag=AB25_1075 NZ_JJMC01000017.1 Protein Homology CDS 84018 84560 . + 0 ID=cds-WP_001356205.1;Parent=gene-AB25_RS19515;Dbxref=GenBank:WP_001356205.1;Name=WP_001356205.1;gbkey=CDS;gene=zapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415466.4;locus_tag=AB25_RS19515;product=cell division protein ZapC;protein_id=WP_001356205.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 84557 85666 . - . ID=gene-AB25_RS19510;Name=ycbX;gbkey=Gene;gene=ycbX;gene_biotype=protein_coding;locus_tag=AB25_RS19510;old_locus_tag=AB25_1076 NZ_JJMC01000017.1 Protein Homology CDS 84557 85666 . - 0 ID=cds-WP_000224270.1;Parent=gene-AB25_RS19510;Dbxref=GenBank:WP_000224270.1;Name=WP_000224270.1;gbkey=CDS;gene=ycbX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415467.1;locus_tag=AB25_RS19510;product=6-N-hydroxylaminopurine resistance protein YcbX;protein_id=WP_000224270.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 85910 88018 . + . ID=gene-AB25_RS19505;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=AB25_RS19505;old_locus_tag=AB25_1077 NZ_JJMC01000017.1 Protein Homology CDS 85910 88018 . + 0 ID=cds-WP_001086520.1;Parent=gene-AB25_RS19505;Dbxref=GenBank:WP_001086520.1;Name=WP_001086520.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309059.1;locus_tag=AB25_RS19505;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WP_001086520.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 88030 89937 . + . ID=gene-AB25_RS19500;Name=uup;gbkey=Gene;gene=uup;gene_biotype=protein_coding;locus_tag=AB25_RS19500;old_locus_tag=AB25_1078 NZ_JJMC01000017.1 Protein Homology CDS 88030 89937 . + 0 ID=cds-WP_000053069.1;Parent=gene-AB25_RS19500;Dbxref=GenBank:WP_000053069.1;Name=WP_000053069.1;Ontology_term=GO:0005524;gbkey=CDS;gene=uup;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415469.1;locus_tag=AB25_RS19500;product=ABC transporter ATP-binding protein;protein_id=WP_000053069.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 90067 91320 . + . ID=gene-AB25_RS19495;Name=pqiA;gbkey=Gene;gene=pqiA;gene_biotype=protein_coding;locus_tag=AB25_RS19495;old_locus_tag=AB25_1079 NZ_JJMC01000017.1 Protein Homology CDS 90067 91320 . + 0 ID=cds-WP_001372779.1;Parent=gene-AB25_RS19495;Dbxref=GenBank:WP_001372779.1;Name=WP_001372779.1;gbkey=CDS;gene=pqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415470.1;locus_tag=AB25_RS19495;product=membrane integrity-associated transporter subunit PqiA;protein_id=WP_001372779.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 91325 92965 . + . ID=gene-AB25_RS19490;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=AB25_RS19490;old_locus_tag=AB25_1080 NZ_JJMC01000017.1 Protein Homology CDS 91325 92965 . + 0 ID=cds-WP_000445535.1;Parent=gene-AB25_RS19490;Dbxref=GenBank:WP_000445535.1;Name=WP_000445535.1;gbkey=CDS;gene=pqiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415471.1;locus_tag=AB25_RS19490;product=intermembrane transport protein PqiB;protein_id=WP_000445535.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 92962 93525 . + . ID=gene-AB25_RS19485;Name=pqiC;gbkey=Gene;gene=pqiC;gene_biotype=protein_coding;locus_tag=AB25_RS19485;old_locus_tag=AB25_1081 NZ_JJMC01000017.1 Protein Homology CDS 92962 93525 . + 0 ID=cds-WP_000759120.1;Parent=gene-AB25_RS19485;Dbxref=GenBank:WP_000759120.1;Name=WP_000759120.1;gbkey=CDS;gene=pqiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706875.1;locus_tag=AB25_RS19485;product=membrane integrity-associated transporter subunit PqiC;protein_id=WP_000759120.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 93781 93948 . + . ID=gene-AB25_RS0124770;Name=rmf;gbkey=Gene;gene=rmf;gene_biotype=protein_coding;locus_tag=AB25_RS0124770 NZ_JJMC01000017.1 Protein Homology CDS 93781 93948 . + 0 ID=cds-WP_000828648.1;Parent=gene-AB25_RS0124770;Dbxref=GenBank:WP_000828648.1;Name=WP_000828648.1;Ontology_term=GO:0141014,GO:0043022;gbkey=CDS;gene=rmf;go_function=ribosome binding|0043022||IEA;go_process=ribosome hibernation|0141014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309064.1;locus_tag=AB25_RS0124770;product=ribosome modulation factor;protein_id=WP_000828648.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 94018 94536 . - . ID=gene-AB25_RS19480;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=AB25_RS19480;old_locus_tag=AB25_1082 NZ_JJMC01000017.1 Protein Homology CDS 94018 94536 . - 0 ID=cds-WP_000227927.1;Parent=gene-AB25_RS19480;Dbxref=GenBank:WP_000227927.1;Name=WP_000227927.1;Ontology_term=GO:0006633,GO:0019171;gbkey=CDS;gene=fabA;go_function=(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity|0019171||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014915875.1;locus_tag=AB25_RS19480;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=WP_000227927.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 94605 96365 . - . ID=gene-AB25_RS19475;Name=ycbZ;gbkey=Gene;gene=ycbZ;gene_biotype=protein_coding;locus_tag=AB25_RS19475;old_locus_tag=AB25_1083 NZ_JJMC01000017.1 Protein Homology CDS 94605 96365 . - 0 ID=cds-WP_000156526.1;Parent=gene-AB25_RS19475;Dbxref=GenBank:WP_000156526.1;Name=WP_000156526.1;gbkey=CDS;gene=ycbZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309066.1;locus_tag=AB25_RS19475;product=AAA family ATPase;protein_id=WP_000156526.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 96551 97003 . + . ID=gene-AB25_RS19470;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;locus_tag=AB25_RS19470;old_locus_tag=AB25_1084 NZ_JJMC01000017.1 Protein Homology CDS 96551 97003 . + 0 ID=cds-WP_000877161.1;Parent=gene-AB25_RS19470;Dbxref=GenBank:WP_000877161.1;Name=WP_000877161.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=matP;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309067.1;locus_tag=AB25_RS19470;product=macrodomain Ter protein MatP;protein_id=WP_000877161.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 97079 98131 . - . ID=gene-AB25_RS19465;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=AB25_RS19465;old_locus_tag=AB25_1085 NZ_JJMC01000017.1 Protein Homology CDS 97079 98131 . - 0 ID=cds-WP_032170644.1;Parent=gene-AB25_RS19465;Dbxref=GenBank:WP_032170644.1;Name=WP_032170644.1;gbkey=CDS;gene=ompA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706879.2;locus_tag=AB25_RS19465;product=porin OmpA;protein_id=WP_032170644.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 98488 98997 . - . ID=gene-AB25_RS19455;Name=sulA;gbkey=Gene;gene=sulA;gene_biotype=protein_coding;locus_tag=AB25_RS19455;old_locus_tag=AB25_1087 NZ_JJMC01000017.1 Protein Homology CDS 98488 98997 . - 0 ID=cds-WP_000288710.1;Parent=gene-AB25_RS19455;Dbxref=GenBank:WP_000288710.1;Name=WP_000288710.1;Ontology_term=GO:0009432,GO:0051782,GO:0005515;gbkey=CDS;gene=sulA;go_function=protein binding|0005515||IEA;go_process=SOS response|0009432||IEA,negative regulation of cell division|0051782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309069.1;locus_tag=AB25_RS19455;product=SOS-induced cell division inhibitor SulA;protein_id=WP_000288710.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 99216 99845 . + . ID=gene-AB25_RS19450;Name=sxy;gbkey=Gene;gene=sxy;gene_biotype=protein_coding;locus_tag=AB25_RS19450;old_locus_tag=AB25_1088 NZ_JJMC01000017.1 Protein Homology CDS 99216 99845 . + 0 ID=cds-WP_000839153.1;Parent=gene-AB25_RS19450;Dbxref=GenBank:WP_000839153.1;Name=WP_000839153.1;gbkey=CDS;gene=sxy;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415479.1;locus_tag=AB25_RS19450;product=CRP-S regulon transcriptional coactivator Sxy;protein_id=WP_000839153.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 99808 101970 . - . ID=gene-AB25_RS19445;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=AB25_RS19445;old_locus_tag=AB25_1089 NZ_JJMC01000017.1 Protein Homology CDS 99808 101970 . - 0 ID=cds-WP_000875023.1;Parent=gene-AB25_RS19445;Dbxref=GenBank:WP_000875023.1;Name=WP_000875023.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309071.3;locus_tag=AB25_RS19445;product=YccS family putative transporter;protein_id=WP_000875023.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 101980 102426 . - . ID=gene-AB25_RS19440;Name=yccF;gbkey=Gene;gene=yccF;gene_biotype=protein_coding;locus_tag=AB25_RS19440;old_locus_tag=AB25_1090 NZ_JJMC01000017.1 Protein Homology CDS 101980 102426 . - 0 ID=cds-WP_001261235.1;Parent=gene-AB25_RS19440;Dbxref=GenBank:WP_001261235.1;Name=WP_001261235.1;gbkey=CDS;gene=yccF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415481.1;locus_tag=AB25_RS19440;product=YccF domain-containing protein;protein_id=WP_001261235.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 102549 104603 . + . ID=gene-AB25_RS19435;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=AB25_RS19435;old_locus_tag=AB25_1091 NZ_JJMC01000017.1 Protein Homology CDS 102549 104603 . + 0 ID=cds-WP_000420536.1;Parent=gene-AB25_RS19435;Dbxref=GenBank:WP_000420536.1;Name=WP_000420536.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=helD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415482.1;locus_tag=AB25_RS19435;product=DNA helicase IV;protein_id=WP_000420536.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 104635 105093 . - . ID=gene-AB25_RS19430;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=AB25_RS19430;old_locus_tag=AB25_1092 NZ_JJMC01000017.1 Protein Homology CDS 104635 105093 . - 0 ID=cds-WP_000424181.1;Parent=gene-AB25_RS19430;Dbxref=GenBank:WP_000424181.1;Name=WP_000424181.1;Ontology_term=GO:0006007,GO:0019242,GO:0008929;gbkey=CDS;gene=mgsA;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=glucose catabolic process|0006007||IEA,methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415483.2;locus_tag=AB25_RS19430;product=methylglyoxal synthase;protein_id=WP_000424181.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 105189 105851 . - . ID=gene-AB25_RS19425;Name=csgI;gbkey=Gene;gene=csgI;gene_biotype=protein_coding;locus_tag=AB25_RS19425;old_locus_tag=AB25_1093 NZ_JJMC01000017.1 Protein Homology CDS 105189 105851 . - 0 ID=cds-WP_000847791.1;Parent=gene-AB25_RS19425;Dbxref=GenBank:WP_000847791.1;Name=WP_000847791.1;gbkey=CDS;gene=csgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309075.1;locus_tag=AB25_RS19425;product=DUF2057 family protein;protein_id=WP_000847791.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 106024 106437 . + . ID=gene-AB25_RS19415;Name=yccU;gbkey=Gene;gene=yccU;gene_biotype=protein_coding;locus_tag=AB25_RS19415;old_locus_tag=AB25_1095 NZ_JJMC01000017.1 Protein Homology CDS 106024 106437 . + 0 ID=cds-WP_000665217.1;Parent=gene-AB25_RS19415;Dbxref=GenBank:WP_000665217.1;Name=WP_000665217.1;Ontology_term=GO:0120225;gbkey=CDS;gene=yccU;go_function=coenzyme A binding|0120225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309076.1;locus_tag=AB25_RS19415;product=CoA-binding protein;protein_id=WP_000665217.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 106482 106799 . - . ID=gene-AB25_RS19410;Name=hspQ;gbkey=Gene;gene=hspQ;gene_biotype=protein_coding;locus_tag=AB25_RS19410;old_locus_tag=AB25_1096 NZ_JJMC01000017.1 Protein Homology CDS 106482 106799 . - 0 ID=cds-WP_001295356.1;Parent=gene-AB25_RS19410;Dbxref=GenBank:WP_001295356.1;Name=WP_001295356.1;gbkey=CDS;gene=hspQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123508.1;locus_tag=AB25_RS19410;product=heat shock protein HspQ;protein_id=WP_001295356.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 106857 108047 . - . ID=gene-AB25_RS19405;Name=rlmI;gbkey=Gene;gene=rlmI;gene_biotype=protein_coding;locus_tag=AB25_RS19405;old_locus_tag=AB25_1097 NZ_JJMC01000017.1 Protein Homology CDS 106857 108047 . - 0 ID=cds-WP_000116288.1;Parent=gene-AB25_RS19405;Dbxref=GenBank:WP_000116288.1;Name=WP_000116288.1;Ontology_term=GO:0003723,GO:0008649;gbkey=CDS;gene=rlmI;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415487.4;locus_tag=AB25_RS19405;product=23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI;protein_id=WP_000116288.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 108142 108420 . + . ID=gene-AB25_RS19400;Name=yccX;gbkey=Gene;gene=yccX;gene_biotype=protein_coding;locus_tag=AB25_RS19400;old_locus_tag=AB25_1098 NZ_JJMC01000017.1 Protein Homology CDS 108142 108420 . + 0 ID=cds-WP_000048250.1;Parent=gene-AB25_RS19400;Dbxref=GenBank:WP_000048250.1;Name=WP_000048250.1;Ontology_term=GO:0003998;gbkey=CDS;gene=yccX;go_function=acylphosphatase activity|0003998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309079.1;locus_tag=AB25_RS19400;product=acylphosphatase;protein_id=WP_000048250.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 108417 108746 . - . ID=gene-AB25_RS19395;Name=tusE;gbkey=Gene;gene=tusE;gene_biotype=protein_coding;locus_tag=AB25_RS19395;old_locus_tag=AB25_1099 NZ_JJMC01000017.1 Protein Homology CDS 108417 108746 . - 0 ID=cds-WP_000904442.1;Parent=gene-AB25_RS19395;Dbxref=GenBank:WP_000904442.1;Name=WP_000904442.1;gbkey=CDS;gene=tusE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309080.2;locus_tag=AB25_RS19395;product=sulfurtransferase TusE;protein_id=WP_000904442.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 108837 109496 . - . ID=gene-AB25_RS19390;Name=yccA;gbkey=Gene;gene=yccA;gene_biotype=protein_coding;locus_tag=AB25_RS19390;old_locus_tag=AB25_1100 NZ_JJMC01000017.1 Protein Homology CDS 108837 109496 . - 0 ID=cds-WP_000375136.1;Parent=gene-AB25_RS19390;Dbxref=GenBank:WP_000375136.1;Name=WP_000375136.1;gbkey=CDS;gene=yccA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000375124.1;locus_tag=AB25_RS19390;product=FtsH protease modulator YccA;protein_id=WP_000375136.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 109703 109790 . - . ID=gene-AB25_RS19385;Name=AB25_RS19385;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS19385;old_locus_tag=AB25_1101 NZ_JJMC01000017.1 tRNAscan-SE tRNA 109703 109790 . - . ID=rna-AB25_RS19385;Parent=gene-AB25_RS19385;anticodon=(pos:complement(109754..109756));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS19385;product=tRNA-Ser NZ_JJMC01000017.1 tRNAscan-SE exon 109703 109790 . - . ID=exon-AB25_RS19385-1;Parent=rna-AB25_RS19385;anticodon=(pos:complement(109754..109756));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS19385;product=tRNA-Ser NZ_JJMC01000017.1 RefSeq gene 110217 111335 . + . ID=gene-AB25_RS19380;Name=hyaA;gbkey=Gene;gene=hyaA;gene_biotype=protein_coding;locus_tag=AB25_RS19380;old_locus_tag=AB25_1102 NZ_JJMC01000017.1 Protein Homology CDS 110217 111335 . + 0 ID=cds-WP_001058320.1;Parent=gene-AB25_RS19380;Dbxref=GenBank:WP_001058320.1;Name=WP_001058320.1;gbkey=CDS;gene=hyaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415491.1;locus_tag=AB25_RS19380;product=hydrogenase 1 small subunit;protein_id=WP_001058320.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 111332 113125 . + . ID=gene-AB25_RS19375;Name=hyaB;gbkey=Gene;gene=hyaB;gene_biotype=protein_coding;locus_tag=AB25_RS19375;old_locus_tag=AB25_1103 NZ_JJMC01000017.1 Protein Homology CDS 111332 113125 . + 0 ID=cds-WP_000107384.1;Parent=gene-AB25_RS19375;Dbxref=GenBank:WP_000107384.1;Name=WP_000107384.1;gbkey=CDS;gene=hyaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415492.1;locus_tag=AB25_RS19375;product=Ni/Fe-hydrogenase large subunit;protein_id=WP_000107384.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 113144 113851 . + . ID=gene-AB25_RS19370;Name=hyaC;gbkey=Gene;gene=hyaC;gene_biotype=protein_coding;locus_tag=AB25_RS19370;old_locus_tag=AB25_1104 NZ_JJMC01000017.1 Protein Homology CDS 113144 113851 . + 0 ID=cds-WP_001186424.1;Parent=gene-AB25_RS19370;Dbxref=GenBank:WP_001186424.1;Name=WP_001186424.1;gbkey=CDS;gene=hyaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309157.1;locus_tag=AB25_RS19370;product=Ni/Fe-hydrogenase b-type cytochrome subunit;protein_id=WP_001186424.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 113848 114435 . + . ID=gene-AB25_RS19365;Name=hyaD;gbkey=Gene;gene=hyaD;gene_biotype=protein_coding;locus_tag=AB25_RS19365;old_locus_tag=AB25_1105 NZ_JJMC01000017.1 Protein Homology CDS 113848 114435 . + 0 ID=cds-WP_000003671.1;Parent=gene-AB25_RS19365;Dbxref=GenBank:WP_000003671.1;Name=WP_000003671.1;gbkey=CDS;gene=hyaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415494.1;locus_tag=AB25_RS19365;product=hydrogenase 1 maturation protease;protein_id=WP_000003671.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 114432 114830 . + . ID=gene-AB25_RS19360;Name=hyaE;gbkey=Gene;gene=hyaE;gene_biotype=protein_coding;locus_tag=AB25_RS19360;old_locus_tag=AB25_1106 NZ_JJMC01000017.1 Protein Homology CDS 114432 114830 . + 0 ID=cds-WP_000063974.1;Parent=gene-AB25_RS19360;Dbxref=GenBank:WP_000063974.1;Name=WP_000063974.1;gbkey=CDS;gene=hyaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415495.1;locus_tag=AB25_RS19360;product=hydrogenase-1 operon protein HyaE;protein_id=WP_000063974.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 114827 115684 . + . ID=gene-AB25_RS19355;Name=hyaF;gbkey=Gene;gene=hyaF;gene_biotype=protein_coding;locus_tag=AB25_RS19355;old_locus_tag=AB25_1107 NZ_JJMC01000017.1 Protein Homology CDS 114827 115684 . + 0 ID=cds-WP_000004899.1;Parent=gene-AB25_RS19355;Dbxref=GenBank:WP_000004899.1;Name=WP_000004899.1;gbkey=CDS;gene=hyaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415496.1;locus_tag=AB25_RS19355;product=hydrogenase expression/formation protein;protein_id=WP_000004899.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 115818 117362 . + . ID=gene-AB25_RS19350;Name=appC;gbkey=Gene;gene=appC;gene_biotype=protein_coding;locus_tag=AB25_RS19350;old_locus_tag=AB25_1108 NZ_JJMC01000017.1 Protein Homology CDS 115818 117362 . + 0 ID=cds-WP_000263575.1;Parent=gene-AB25_RS19350;Dbxref=GenBank:WP_000263575.1;Name=WP_000263575.1;gbkey=CDS;gene=appC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706901.2;locus_tag=AB25_RS19350;product=cytochrome bd-II oxidase subunit 1;protein_id=WP_000263575.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 117374 118510 . + . ID=gene-AB25_RS19345;Name=appB;gbkey=Gene;gene=appB;gene_biotype=protein_coding;locus_tag=AB25_RS19345;old_locus_tag=AB25_1109 NZ_JJMC01000017.1 Protein Homology CDS 117374 118510 . + 0 ID=cds-WP_000460777.1;Parent=gene-AB25_RS19345;Dbxref=GenBank:WP_000460777.1;Name=WP_000460777.1;gbkey=CDS;gene=appB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309162.1;locus_tag=AB25_RS19345;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000460777.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 118523 118615 . + . ID=gene-AB25_RS0124775;Name=cbdX;gbkey=Gene;gene=cbdX;gene_biotype=protein_coding;locus_tag=AB25_RS0124775 NZ_JJMC01000017.1 Protein Homology CDS 118523 118615 . + 0 ID=cds-WP_000270305.1;Parent=gene-AB25_RS0124775;Dbxref=GenBank:WP_000270305.1;Name=WP_000270305.1;gbkey=CDS;gene=cbdX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165313.1;locus_tag=AB25_RS0124775;product=cytochrome bd-II oxidase subunit CbdX;protein_id=WP_000270305.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 118695 119993 . + . ID=gene-AB25_RS19340;Name=appA;gbkey=Gene;gene=appA;gene_biotype=protein_coding;locus_tag=AB25_RS19340;old_locus_tag=AB25_1110 NZ_JJMC01000017.1 Protein Homology CDS 118695 119993 . + 0 ID=cds-WP_001361723.1;Parent=gene-AB25_RS19340;Dbxref=GenBank:WP_001361723.1;Name=WP_001361723.1;gbkey=CDS;gene=appA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415500.1;locus_tag=AB25_RS19340;product=bifunctional acid phosphatase/4-phytase;protein_id=WP_001361723.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 120113 122293 . - . ID=gene-AB25_RS19335;Name=etk;gbkey=Gene;gene=etk;gene_biotype=protein_coding;locus_tag=AB25_RS19335;old_locus_tag=AB25_1111 NZ_JJMC01000017.1 Protein Homology CDS 120113 122293 . - 0 ID=cds-WP_000208665.1;Parent=gene-AB25_RS19335;Dbxref=GenBank:WP_000208665.1;Name=WP_000208665.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=etk;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309164.1;locus_tag=AB25_RS19335;product=tyrosine-protein kinase;protein_id=WP_000208665.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 122313 122759 . - . ID=gene-AB25_RS19330;Name=etp;gbkey=Gene;gene=etp;gene_biotype=protein_coding;gene_synonym=yccY;locus_tag=AB25_RS19330;old_locus_tag=AB25_1112 NZ_JJMC01000017.1 Protein Homology CDS 122313 122759 . - 0 ID=cds-WP_000057871.1;Parent=gene-AB25_RS19330;Dbxref=GenBank:WP_000057871.1;Name=WP_000057871.1;gbkey=CDS;gene=etp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309165.2;locus_tag=AB25_RS19330;product=protein-tyrosine-phosphatase Etp;protein_id=WP_000057871.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 122747 123886 . - . ID=gene-AB25_RS19325;Name=gfcE;gbkey=Gene;gene=gfcE;gene_biotype=protein_coding;locus_tag=AB25_RS19325;old_locus_tag=AB25_1113 NZ_JJMC01000017.1 Protein Homology CDS 122747 123886 . - 0 ID=cds-WP_001295357.1;Parent=gene-AB25_RS19325;Dbxref=GenBank:WP_001295357.1;Name=WP_001295357.1;Ontology_term=GO:0015774,GO:0016020;gbkey=CDS;gene=gfcE;go_component=membrane|0016020||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309166.1;locus_tag=AB25_RS19325;product=polysaccharide export protein;protein_id=WP_001295357.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 123932 126028 . - . ID=gene-AB25_RS19320;Name=gfcD;gbkey=Gene;gene=gfcD;gene_biotype=protein_coding;locus_tag=AB25_RS19320;old_locus_tag=AB25_1114 NZ_JJMC01000017.1 Protein Homology CDS 123932 126028 . - 0 ID=cds-WP_000742304.1;Parent=gene-AB25_RS19320;Dbxref=GenBank:WP_000742304.1;Name=WP_000742304.1;gbkey=CDS;gene=gfcD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309167.1;locus_tag=AB25_RS19320;product=YjbH domain-containing protein;protein_id=WP_000742304.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 126028 126774 . - . ID=gene-AB25_RS19315;Name=gfcC;gbkey=Gene;gene=gfcC;gene_biotype=protein_coding;locus_tag=AB25_RS19315;old_locus_tag=AB25_1115 NZ_JJMC01000017.1 Protein Homology CDS 126028 126774 . - 0 ID=cds-WP_001038079.1;Parent=gene-AB25_RS19315;Dbxref=GenBank:WP_001038079.1;Name=WP_001038079.1;gbkey=CDS;gene=gfcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415505.1;locus_tag=AB25_RS19315;product=capsule biosynthesis GfcC family protein;protein_id=WP_001038079.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 126771 127415 . - . ID=gene-AB25_RS19310;Name=gfcB;gbkey=Gene;gene=gfcB;gene_biotype=protein_coding;locus_tag=AB25_RS19310;old_locus_tag=AB25_1116 NZ_JJMC01000017.1 Protein Homology CDS 126771 127415 . - 0 ID=cds-WP_001247610.1;Parent=gene-AB25_RS19310;Dbxref=GenBank:WP_001247610.1;Name=WP_001247610.1;gbkey=CDS;gene=gfcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415506.1;locus_tag=AB25_RS19310;product=lipoprotein GfcB;protein_id=WP_001247610.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 127522 127827 . - . ID=gene-AB25_RS19305;Name=AB25_RS19305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS19305;old_locus_tag=AB25_1117 NZ_JJMC01000017.1 Protein Homology CDS 127522 127827 . - 0 ID=cds-WP_001299283.1;Parent=gene-AB25_RS19305;Dbxref=GenBank:WP_001299283.1;Name=WP_001299283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309170.2;locus_tag=AB25_RS19305;product=threonine-rich inner membrane protein GfcA;protein_id=WP_001299283.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 128269 128481 . - . ID=gene-AB25_RS19300;Name=cspH;gbkey=Gene;gene=cspH;gene_biotype=protein_coding;locus_tag=AB25_RS19300;old_locus_tag=AB25_1118 NZ_JJMC01000017.1 Protein Homology CDS 128269 128481 . - 0 ID=cds-WP_000087763.1;Parent=gene-AB25_RS19300;Dbxref=GenBank:WP_000087763.1;Name=WP_000087763.1;gbkey=CDS;gene=cspH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415509.1;locus_tag=AB25_RS19300;product=cold shock-like protein CspH;protein_id=WP_000087763.1;transl_table=11 NZ_JJMC01000017.1 RefSeq gene 128603 129294 . + . ID=gene-AB25_RS19295;Name=AB25_RS19295;end_range=129294,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS19295;old_locus_tag=AB25_1119;partial=true NZ_JJMC01000017.1 Protein Homology CDS 128603 128852 . + 0 ID=cds-WP_249402582.1;Parent=gene-AB25_RS19295;Dbxref=GenBank:WP_249402582.1;Name=WP_249402582.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB25_RS19295;partial=true;product=IS1-like element IS1A family transposase;protein_id=WP_249402582.1;transl_table=11 NZ_JJMC01000017.1 Protein Homology CDS 128852 129294 . + 2 ID=cds-WP_249402582.1;Parent=gene-AB25_RS19295;Dbxref=GenBank:WP_249402582.1;Name=WP_249402582.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;end_range=129294,.;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB25_RS19295;partial=true;product=IS1-like element IS1A family transposase;protein_id=WP_249402582.1;transl_table=11 ##sequence-region NZ_JJMC01000018.1 1 44629 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000018.1 RefSeq region 1 44629 . + . ID=NZ_JJMC01000018.1:1..44629;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000018.1 RefSeq pseudogene 1 585 . + . ID=gene-AB25_RS30115;Name=AB25_RS30115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS30115;old_locus_tag=AB25_1120;partial=true;pseudo=true;start_range=.,1 NZ_JJMC01000018.1 Protein Homology CDS 1 585 . + 1 ID=cds-AB25_RS30115;Parent=gene-AB25_RS30115;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB25_RS30115;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJMC01000018.1 RefSeq gene 829 1041 . + . ID=gene-AB25_RS19285;Name=cspG;gbkey=Gene;gene=cspG;gene_biotype=protein_coding;locus_tag=AB25_RS19285;old_locus_tag=AB25_1121 NZ_JJMC01000018.1 Protein Homology CDS 829 1041 . + 0 ID=cds-WP_000066490.1;Parent=gene-AB25_RS19285;Dbxref=GenBank:WP_000066490.1;Name=WP_000066490.1;gbkey=CDS;gene=cspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309172.1;locus_tag=AB25_RS19285;product=cold shock protein CspG;protein_id=WP_000066490.1;transl_table=11 NZ_JJMC01000018.1 RefSeq gene 1052 1240 . + . ID=gene-AB25_RS27905;Name=ymcF;gbkey=Gene;gene=ymcF;gene_biotype=protein_coding;locus_tag=AB25_RS27905 NZ_JJMC01000018.1 Protein Homology CDS 1052 1240 . + 0 ID=cds-WP_071524879.1;Parent=gene-AB25_RS27905;Dbxref=GenBank:WP_071524879.1;Name=WP_071524879.1;gbkey=CDS;gene=ymcF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518761.1;locus_tag=AB25_RS27905;product=cold-shock protein;protein_id=WP_071524879.1;transl_table=11 NZ_JJMC01000018.1 RefSeq gene 1215 1445 . + . ID=gene-AB25_RS0124780;Name=ymcE;gbkey=Gene;gene=ymcE;gene_biotype=protein_coding;locus_tag=AB25_RS0124780 NZ_JJMC01000018.1 Protein Homology CDS 1215 1445 . + 0 ID=cds-WP_001323678.1;Parent=gene-AB25_RS0124780;Dbxref=GenBank:WP_001323678.1;Name=WP_001323678.1;gbkey=CDS;gene=ymcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706913.1;locus_tag=AB25_RS0124780;product=protein YmcE;protein_id=WP_001323678.1;transl_table=11 NZ_JJMC01000018.1 RefSeq gene 1435 1608 . + . ID=gene-AB25_RS19280;Name=gnsA;gbkey=Gene;gene=gnsA;gene_biotype=protein_coding;locus_tag=AB25_RS19280;old_locus_tag=AB25_1122 NZ_JJMC01000018.1 Protein Homology CDS 1435 1608 . + 0 ID=cds-WP_001019197.1;Parent=gene-AB25_RS19280;Dbxref=GenBank:WP_001019197.1;Name=WP_001019197.1;gbkey=CDS;gene=gnsA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588446.1;locus_tag=AB25_RS19280;product=GnsA/GnsB family addiction module toxin;protein_id=WP_001019197.1;transl_table=11 NZ_JJMC01000018.1 RefSeq gene 1657 2730 . - . ID=gene-AB25_RS19275;Name=yccM;gbkey=Gene;gene=yccM;gene_biotype=protein_coding;locus_tag=AB25_RS19275;old_locus_tag=AB25_1123 NZ_JJMC01000018.1 Protein Homology CDS 1657 2730 . - 0 ID=cds-WP_000829660.1;Parent=gene-AB25_RS19275;Dbxref=GenBank:WP_000829660.1;Name=WP_000829660.1;Ontology_term=GO:0051539;gbkey=CDS;gene=yccM;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415512.1;locus_tag=AB25_RS19275;product=4Fe-4S binding protein;protein_id=WP_000829660.1;transl_table=11 NZ_JJMC01000018.1 RefSeq gene 2802 5546 . - . ID=gene-AB25_RS19270;Name=torS;gbkey=Gene;gene=torS;gene_biotype=protein_coding;locus_tag=AB25_RS19270;old_locus_tag=AB25_1124 NZ_JJMC01000018.1 Protein Homology CDS 2802 5546 . - 0 ID=cds-WP_015364465.1;Parent=gene-AB25_RS19270;Dbxref=GenBank:WP_015364465.1;Name=WP_015364465.1;gbkey=CDS;gene=torS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415513.2;locus_tag=AB25_RS19270;product=TMAO reductase system sensor histidine kinase/response regulator TorS;protein_id=WP_015364465.1;transl_table=11 NZ_JJMC01000018.1 RefSeq gene 5629 6657 . + . ID=gene-AB25_RS19265;Name=torT;gbkey=Gene;gene=torT;gene_biotype=protein_coding;locus_tag=AB25_RS19265;old_locus_tag=AB25_1125 NZ_JJMC01000018.1 Protein Homology CDS 5629 6657 . + 0 ID=cds-WP_001264933.1;Parent=gene-AB25_RS19265;Dbxref=GenBank:WP_001264933.1;Name=WP_001264933.1;gbkey=CDS;gene=torT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415514.1;locus_tag=AB25_RS19265;product=TMAO reductase system periplasmic protein TorT;protein_id=WP_001264933.1;transl_table=11 NZ_JJMC01000018.1 RefSeq gene 6630 7322 . - . ID=gene-AB25_RS19260;Name=torR;gbkey=Gene;gene=torR;gene_biotype=protein_coding;locus_tag=AB25_RS19260;old_locus_tag=AB25_1126 NZ_JJMC01000018.1 Protein Homology CDS 6630 7322 . - 0 ID=cds-WP_001120112.1;Parent=gene-AB25_RS19260;Dbxref=GenBank:WP_001120112.1;Name=WP_001120112.1;gbkey=CDS;gene=torR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309177.1;locus_tag=AB25_RS19260;product=two-component system response regulator TorR;protein_id=WP_001120112.1;transl_table=11 NZ_JJMC01000018.1 RefSeq gene 7462 8634 . + . ID=gene-AB25_RS19255;Name=torC;gbkey=Gene;gene=torC;gene_biotype=protein_coding;locus_tag=AB25_RS19255;old_locus_tag=AB25_1127 NZ_JJMC01000018.1 Protein Homology CDS 7462 8634 . + 0 ID=cds-WP_001323677.1;Parent=gene-AB25_RS19255;Dbxref=GenBank:WP_001323677.1;Name=WP_001323677.1;Ontology_term=GO:0009055,GO:0020037,GO:0016020;gbkey=CDS;gene=torC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415516.1;locus_tag=AB25_RS19255;product=pentaheme c-type cytochrome TorC;protein_id=WP_001323677.1;transl_table=11 NZ_JJMC01000018.1 RefSeq gene 8634 11180 . + . ID=gene-AB25_RS19250;Name=torA;gbkey=Gene;gene=torA;gene_biotype=protein_coding;locus_tag=AB25_RS19250;old_locus_tag=AB25_1128 NZ_JJMC01000018.1 Protein Homology CDS 8634 11180 . + 0 ID=cds-WP_032170645.1;Parent=gene-AB25_RS19250;Dbxref=GenBank:WP_032170645.1;Name=WP_032170645.1;Ontology_term=GO:0030151,GO:0043546,GO:0050626,GO:0042597;gbkey=CDS;gene=torA;go_component=periplasmic space|0042597||IEA;go_function=molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,trimethylamine-N-oxide reductase (cytochrome c) activity|0050626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415517.1;locus_tag=AB25_RS19250;product=trimethylamine-N-oxide reductase TorA;protein_id=WP_032170645.1;transl_table=11 NZ_JJMC01000018.1 RefSeq gene 11177 11776 . + . ID=gene-AB25_RS19245;Name=torD;gbkey=Gene;gene=torD;gene_biotype=protein_coding;locus_tag=AB25_RS19245;old_locus_tag=AB25_1129 NZ_JJMC01000018.1 Protein Homology CDS 11177 11776 . + 0 ID=cds-WP_000209869.1;Parent=gene-AB25_RS19245;Dbxref=GenBank:WP_000209869.1;Name=WP_000209869.1;Ontology_term=GO:0051259;gbkey=CDS;gene=torD;go_process=protein complex oligomerization|0051259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415518.1;locus_tag=AB25_RS19245;product=molecular chaperone TorD;protein_id=WP_000209869.1;transl_table=11 NZ_JJMC01000018.1 RefSeq gene 11869 12174 . - . ID=gene-AB25_RS19240;Name=cbpM;gbkey=Gene;gene=cbpM;gene_biotype=protein_coding;locus_tag=AB25_RS19240;old_locus_tag=AB25_1130 NZ_JJMC01000018.1 Protein Homology CDS 11869 12174 . - 0 ID=cds-WP_000024560.1;Parent=gene-AB25_RS19240;Dbxref=GenBank:WP_000024560.1;Name=WP_000024560.1;gbkey=CDS;gene=cbpM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309181.1;locus_tag=AB25_RS19240;product=chaperone modulator CbpM;protein_id=WP_000024560.1;transl_table=11 NZ_JJMC01000018.1 RefSeq gene 12174 13094 . - . ID=gene-AB25_RS19235;Name=cbpA;gbkey=Gene;gene=cbpA;gene_biotype=protein_coding;locus_tag=AB25_RS19235;old_locus_tag=AB25_1131 NZ_JJMC01000018.1 Protein Homology CDS 12174 13094 . - 0 ID=cds-WP_000420629.1;Parent=gene-AB25_RS19235;Dbxref=GenBank:WP_000420629.1;Name=WP_000420629.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=cbpA;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415520.1;locus_tag=AB25_RS19235;product=curved DNA-binding protein;protein_id=WP_000420629.1;transl_table=11 NZ_JJMC01000018.1 RefSeq gene 13354 14613 . + . ID=gene-AB25_RS19230;Name=AB25_RS19230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS19230;old_locus_tag=AB25_1132 NZ_JJMC01000018.1 Protein Homology CDS 13354 14613 . + 0 ID=cds-WP_000097602.1;Parent=gene-AB25_RS19230;Dbxref=GenBank:WP_000097602.1;Name=WP_000097602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000097604.1;locus_tag=AB25_RS19230;product=YccE family protein;protein_id=WP_000097602.1;transl_table=11 NZ_JJMC01000018.1 RefSeq gene 14905 16146 . + . ID=gene-AB25_RS19225;Name=agp;gbkey=Gene;gene=agp;gene_biotype=protein_coding;locus_tag=AB25_RS19225;old_locus_tag=AB25_1133 NZ_JJMC01000018.1 Protein Homology CDS 14905 16146 . + 0 ID=cds-WP_001044313.1;Parent=gene-AB25_RS19225;Dbxref=GenBank:WP_001044313.1;Name=WP_001044313.1;gbkey=CDS;gene=agp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415522.1;locus_tag=AB25_RS19225;product=bifunctional glucose-1-phosphatase/inositol phosphatase;protein_id=WP_001044313.1;transl_table=11 NZ_JJMC01000018.1 RefSeq gene 16184 16411 . - . ID=gene-AB25_RS19220;Name=yccJ;gbkey=Gene;gene=yccJ;gene_biotype=protein_coding;locus_tag=AB25_RS19220;old_locus_tag=AB25_1134 NZ_JJMC01000018.1 Protein Homology CDS 16184 16411 . - 0 ID=cds-WP_001143120.1;Parent=gene-AB25_RS19220;Dbxref=GenBank:WP_001143120.1;Name=WP_001143120.1;gbkey=CDS;gene=yccJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898701.1;locus_tag=AB25_RS19220;product=YccJ family protein;protein_id=WP_001143120.1;transl_table=11 NZ_JJMC01000018.1 RefSeq gene 16432 17028 . - . ID=gene-AB25_RS19215;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=AB25_RS19215;old_locus_tag=AB25_1135 NZ_JJMC01000018.1 Protein Homology CDS 16432 17028 . - 0 ID=cds-WP_001151437.1;Parent=gene-AB25_RS19215;Dbxref=GenBank:WP_001151437.1;Name=WP_001151437.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415524.1;locus_tag=AB25_RS19215;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_001151437.1;transl_table=11 NZ_JJMC01000018.1 RefSeq gene 17401 17574 . + . ID=gene-AB25_RS0124790;Name=ymdF;gbkey=Gene;gene=ymdF;gene_biotype=protein_coding;locus_tag=AB25_RS0124790;old_locus_tag=AB25_1136 NZ_JJMC01000018.1 Protein Homology CDS 17401 17574 . + 0 ID=cds-WP_001273658.1;Parent=gene-AB25_RS0124790;Dbxref=GenBank:WP_001273658.1;Name=WP_001273658.1;Ontology_term=GO:0006950;gbkey=CDS;gene=ymdF;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415525.2;locus_tag=AB25_RS0124790;product=general stress protein;protein_id=WP_001273658.1;transl_table=11 NZ_JJMC01000018.1 RefSeq gene 17657 18985 . - . ID=gene-AB25_RS19210;Name=rutG;gbkey=Gene;gene=rutG;gene_biotype=protein_coding;locus_tag=AB25_RS19210;old_locus_tag=AB25_1137 NZ_JJMC01000018.1 Protein Homology CDS 17657 18985 . - 0 ID=cds-WP_001347171.1;Parent=gene-AB25_RS19210;Dbxref=GenBank:WP_001347171.1;Name=WP_001347171.1;Ontology_term=GO:0006864,GO:0015218,GO:0016020;gbkey=CDS;gene=rutG;go_component=membrane|0016020||IEA;go_function=pyrimidine nucleotide transmembrane transporter activity|0015218||IEA;go_process=pyrimidine nucleotide transport|0006864||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415526.4;locus_tag=AB25_RS19210;product=pyrimidine utilization transport protein G;protein_id=WP_001347171.1;transl_table=11 NZ_JJMC01000018.1 RefSeq gene 19006 19500 . - . ID=gene-AB25_RS19205;Name=rutF;gbkey=Gene;gene=rutF;gene_biotype=protein_coding;locus_tag=AB25_RS19205;old_locus_tag=AB25_1138 NZ_JJMC01000018.1 Protein Homology CDS 19006 19500 . - 0 ID=cds-WP_001028095.1;Parent=gene-AB25_RS19205;Dbxref=GenBank:WP_001028095.1;Name=WP_001028095.1;Ontology_term=GO:0008752;gbkey=CDS;gene=rutF;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309280.2;locus_tag=AB25_RS19205;product=NADH-dependent FMN reductase RutF;protein_id=WP_001028095.1;transl_table=11 NZ_JJMC01000018.1 RefSeq gene 19511 20101 . - . ID=gene-AB25_RS19200;Name=rutE;gbkey=Gene;gene=rutE;gene_biotype=protein_coding;locus_tag=AB25_RS19200;old_locus_tag=AB25_1139 NZ_JJMC01000018.1 Protein Homology CDS 19511 20101 . - 0 ID=cds-WP_001001184.1;Parent=gene-AB25_RS19200;Dbxref=GenBank:WP_001001184.1;Name=WP_001001184.1;Ontology_term=GO:0016491;gbkey=CDS;gene=rutE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706930.1;locus_tag=AB25_RS19200;product=malonic semialdehyde reductase;protein_id=WP_001001184.1;transl_table=11 NZ_JJMC01000018.1 RefSeq gene 20111 20911 . - . ID=gene-AB25_RS19195;Name=rutD;gbkey=Gene;gene=rutD;gene_biotype=protein_coding;locus_tag=AB25_RS19195;old_locus_tag=AB25_1140 NZ_JJMC01000018.1 Protein Homology CDS 20111 20911 . - 0 ID=cds-WP_001323674.1;Parent=gene-AB25_RS19195;Dbxref=GenBank:WP_001323674.1;Name=WP_001323674.1;Ontology_term=GO:0006212,GO:0016811;gbkey=CDS;gene=rutD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309282.1;locus_tag=AB25_RS19195;product=pyrimidine utilization protein D;protein_id=WP_001323674.1;transl_table=11 NZ_JJMC01000018.1 RefSeq gene 20919 21305 . - . ID=gene-AB25_RS19190;Name=rutC;gbkey=Gene;gene=rutC;gene_biotype=protein_coding;locus_tag=AB25_RS19190;old_locus_tag=AB25_1141 NZ_JJMC01000018.1 Protein Homology CDS 20919 21305 . - 0 ID=cds-WP_001126787.1;Parent=gene-AB25_RS19190;Dbxref=GenBank:WP_001126787.1;Name=WP_001126787.1;gbkey=CDS;gene=rutC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415530.1;locus_tag=AB25_RS19190;product=3-aminoacrylate deaminase;protein_id=WP_001126787.1;transl_table=11 NZ_JJMC01000018.1 RefSeq gene 21317 22009 . - . ID=gene-AB25_RS19185;Name=rutB;gbkey=Gene;gene=rutB;gene_biotype=protein_coding;locus_tag=AB25_RS19185;old_locus_tag=AB25_1142 NZ_JJMC01000018.1 Protein Homology CDS 21317 22009 . - 0 ID=cds-WP_001345643.1;Parent=gene-AB25_RS19185;Dbxref=GenBank:WP_001345643.1;Name=WP_001345643.1;gbkey=CDS;gene=rutB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415531.2;locus_tag=AB25_RS19185;product=peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB;protein_id=WP_001345643.1;transl_table=11 NZ_JJMC01000018.1 RefSeq gene 22009 23100 . - . ID=gene-AB25_RS19180;Name=rutA;gbkey=Gene;gene=rutA;gene_biotype=protein_coding;locus_tag=AB25_RS19180;old_locus_tag=AB25_1143 NZ_JJMC01000018.1 Protein Homology CDS 22009 23100 . - 0 ID=cds-WP_001345642.1;Parent=gene-AB25_RS19180;Dbxref=GenBank:WP_001345642.1;Name=WP_001345642.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;gene=rutA;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309285.4;locus_tag=AB25_RS19180;product=pyrimidine utilization protein A;protein_id=WP_001345642.1;transl_table=11 NZ_JJMC01000018.1 RefSeq gene 23388 24026 . + . ID=gene-AB25_RS19175;Name=rutR;gbkey=Gene;gene=rutR;gene_biotype=protein_coding;locus_tag=AB25_RS19175;old_locus_tag=AB25_1144 NZ_JJMC01000018.1 Protein Homology CDS 23388 24026 . + 0 ID=cds-WP_001295606.1;Parent=gene-AB25_RS19175;Dbxref=GenBank:WP_001295606.1;Name=WP_001295606.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;gene=rutR;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415533.1;locus_tag=AB25_RS19175;product=HTH-type transcriptional regulator RutR;protein_id=WP_001295606.1;transl_table=11 NZ_JJMC01000018.1 RefSeq gene 24066 28028 . - . ID=gene-AB25_RS19170;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=AB25_RS19170;old_locus_tag=AB25_1145 NZ_JJMC01000018.1 Protein Homology CDS 24066 28028 . - 0 ID=cds-WP_001299828.1;Parent=gene-AB25_RS19170;Dbxref=GenBank:WP_001299828.1;Name=WP_001299828.1;Ontology_term=GO:0006355,GO:0006561,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,1-pyrroline-5-carboxylate dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309287.1;locus_tag=AB25_RS19170;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_001299828.1;transl_table=11 NZ_JJMC01000018.1 RefSeq gene 28450 29958 . + . ID=gene-AB25_RS19165;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=AB25_RS19165;old_locus_tag=AB25_1147 NZ_JJMC01000018.1 Protein Homology CDS 28450 29958 . + 0 ID=cds-WP_001018486.1;Parent=gene-AB25_RS19165;Dbxref=GenBank:WP_001018486.1;Name=WP_001018486.1;Ontology_term=GO:0006814,GO:0015824,GO:0055085,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415535.1;locus_tag=AB25_RS19165;product=sodium/proline symporter PutP;protein_id=WP_001018486.1;transl_table=11 NZ_JJMC01000018.1 RefSeq gene 30163 30465 . - . ID=gene-AB25_RS31010;Name=AB25_RS31010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31010 NZ_JJMC01000018.1 GeneMarkS-2+ CDS 30163 30465 . - 0 ID=cds-WP_001323669.1;Parent=gene-AB25_RS31010;Dbxref=GenBank:WP_001323669.1;Name=WP_001323669.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB25_RS31010;product=hypothetical protein;protein_id=WP_001323669.1;transl_table=11 NZ_JJMC01000018.1 RefSeq gene 30501 31331 . + . ID=gene-AB25_RS19160;Name=efeU;gbkey=Gene;gene=efeU;gene_biotype=protein_coding;locus_tag=AB25_RS19160;old_locus_tag=AB25_1148 NZ_JJMC01000018.1 Protein Homology CDS 30501 31331 . + 0 ID=cds-WP_000497942.1;Parent=gene-AB25_RS19160;Dbxref=GenBank:WP_000497942.1;Name=WP_000497942.1;Ontology_term=GO:0034755,GO:0005381,GO:0033573;gbkey=CDS;gene=efeU;go_component=high-affinity iron permease complex|0033573||IEA;go_function=iron ion transmembrane transporter activity|0005381||IEA;go_process=iron ion transmembrane transport|0034755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309290.1;locus_tag=AB25_RS19160;product=iron uptake transporter permease EfeU;protein_id=WP_000497942.1;transl_table=11 NZ_JJMC01000018.1 RefSeq gene 31389 32516 . + . ID=gene-AB25_RS19155;Name=efeO;gbkey=Gene;gene=efeO;gene_biotype=protein_coding;locus_tag=AB25_RS19155;old_locus_tag=AB25_1149 NZ_JJMC01000018.1 Protein Homology CDS 31389 32516 . + 0 ID=cds-WP_000154414.1;Parent=gene-AB25_RS19155;Dbxref=GenBank:WP_000154414.1;Name=WP_000154414.1;gbkey=CDS;gene=efeO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309291.1;locus_tag=AB25_RS19155;product=iron uptake system protein EfeO;protein_id=WP_000154414.1;transl_table=11 NZ_JJMC01000018.1 RefSeq gene 32522 33793 . + . ID=gene-AB25_RS19150;Name=efeB;gbkey=Gene;gene=efeB;gene_biotype=protein_coding;locus_tag=AB25_RS19150;old_locus_tag=AB25_1150 NZ_JJMC01000018.1 Protein Homology CDS 32522 33793 . + 0 ID=cds-WP_001199172.1;Parent=gene-AB25_RS19150;Dbxref=GenBank:WP_001199172.1;Name=WP_001199172.1;Ontology_term=GO:0033212,GO:0004601,GO:0020037;gbkey=CDS;gene=efeB;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=iron import into cell|0033212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309292.1;locus_tag=AB25_RS19150;product=iron uptake transporter deferrochelatase/peroxidase subunit;protein_id=WP_001199172.1;transl_table=11 NZ_JJMC01000018.1 RefSeq gene 34412 35200 . + . ID=gene-AB25_RS19140;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=AB25_RS19140;old_locus_tag=AB25_1152 NZ_JJMC01000018.1 Protein Homology CDS 34412 35200 . + 0 ID=cds-WP_000533522.1;Parent=gene-AB25_RS19140;Dbxref=GenBank:WP_000533522.1;Name=WP_000533522.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741490.1;locus_tag=AB25_RS19140;product=phosphate starvation-inducible protein PhoH;protein_id=WP_000533522.1;transl_table=11 NZ_JJMC01000018.1 RefSeq gene 35250 35663 . - . ID=gene-AB25_RS19135;Name=pgaD;gbkey=Gene;gene=pgaD;gene_biotype=protein_coding;locus_tag=AB25_RS19135;old_locus_tag=AB25_1153 NZ_JJMC01000018.1 Protein Homology CDS 35250 35663 . - 0 ID=cds-WP_001061095.1;Parent=gene-AB25_RS19135;Dbxref=GenBank:WP_001061095.1;Name=WP_001061095.1;gbkey=CDS;gene=pgaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309294.1;locus_tag=AB25_RS19135;product=poly-beta-1%2C6-N-acetyl-D-glucosamine biosynthesis protein PgaD;protein_id=WP_001061095.1;transl_table=11 NZ_JJMC01000018.1 RefSeq gene 35665 36990 . - . ID=gene-AB25_RS19130;Name=pgaC;gbkey=Gene;gene=pgaC;gene_biotype=protein_coding;locus_tag=AB25_RS19130;old_locus_tag=AB25_1154 NZ_JJMC01000018.1 Protein Homology CDS 35665 36990 . - 0 ID=cds-WP_000610451.1;Parent=gene-AB25_RS19130;Dbxref=GenBank:WP_000610451.1;Name=WP_000610451.1;Ontology_term=GO:0042710,GO:0008375;gbkey=CDS;gene=pgaC;go_function=acetylglucosaminyltransferase activity|0008375||IEA;go_process=biofilm formation|0042710||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415541.1;locus_tag=AB25_RS19130;product=poly-beta-1%2C6-N-acetyl-D-glucosamine synthase;protein_id=WP_000610451.1;transl_table=11 NZ_JJMC01000018.1 RefSeq gene 36983 39001 . - . ID=gene-AB25_RS19125;Name=pgaB;gbkey=Gene;gene=pgaB;gene_biotype=protein_coding;locus_tag=AB25_RS19125;old_locus_tag=AB25_1155 NZ_JJMC01000018.1 Protein Homology CDS 36983 39001 . - 0 ID=cds-WP_032170647.1;Parent=gene-AB25_RS19125;Dbxref=GenBank:WP_032170647.1;Name=WP_032170647.1;gbkey=CDS;gene=pgaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415542.1;locus_tag=AB25_RS19125;product=poly-beta-1%2C6-N-acetyl-D-glucosamine N-deacetylase PgaB;protein_id=WP_032170647.1;transl_table=11 NZ_JJMC01000018.1 RefSeq gene 39010 41433 . - . ID=gene-AB25_RS19120;Name=pgaA;gbkey=Gene;gene=pgaA;gene_biotype=protein_coding;locus_tag=AB25_RS19120;old_locus_tag=AB25_1156 NZ_JJMC01000018.1 Protein Homology CDS 39010 41433 . - 0 ID=cds-WP_032295892.1;Parent=gene-AB25_RS19120;Dbxref=GenBank:WP_032295892.1;Name=WP_032295892.1;Ontology_term=GO:1901515;gbkey=CDS;gene=pgaA;go_function=poly-beta-1%2C6-N-acetyl-D-glucosamine transmembrane transporter activity|1901515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309297.1;locus_tag=AB25_RS19120;product=poly-beta-1%2C6 N-acetyl-D-glucosamine export porin PgaA;protein_id=WP_032295892.1;transl_table=11 NZ_JJMC01000018.1 RefSeq gene 42020 43378 . + . ID=gene-AB25_RS19115;Name=dgcT;gbkey=Gene;gene=dgcT;gene_biotype=protein_coding;locus_tag=AB25_RS19115;old_locus_tag=AB25_1157 NZ_JJMC01000018.1 Protein Homology CDS 42020 43378 . + 0 ID=cds-WP_000409883.1;Parent=gene-AB25_RS19115;Dbxref=GenBank:WP_000409883.1;Name=WP_000409883.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;gene=dgcT;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415544.1;locus_tag=AB25_RS19115;product=GGDEF domain-containing protein;protein_id=WP_000409883.1;transl_table=11 NZ_JJMC01000018.1 RefSeq gene 43419 44581 . - . ID=gene-AB25_RS19110;Name=AB25_RS19110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS19110;old_locus_tag=AB25_1158 NZ_JJMC01000018.1 Protein Homology CDS 44320 44581 . - 0 ID=cds-WP_085959720.1;Parent=gene-AB25_RS19110;Dbxref=GenBank:WP_085959720.1;Name=WP_085959720.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB25_RS19110;product=IS3-like element IS3 family transposase;protein_id=WP_085959720.1;transl_table=11 NZ_JJMC01000018.1 Protein Homology CDS 43419 44320 . - 2 ID=cds-WP_085959720.1;Parent=gene-AB25_RS19110;Dbxref=GenBank:WP_085959720.1;Name=WP_085959720.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB25_RS19110;product=IS3-like element IS3 family transposase;protein_id=WP_085959720.1;transl_table=11 ##sequence-region NZ_JJMC01000019.1 1 4155 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000019.1 RefSeq region 1 4155 . + . ID=NZ_JJMC01000019.1:1..4155;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000019.1 RefSeq pseudogene 1 945 . - . ID=gene-AB25_RS19100;Name=AB25_RS19100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS19100;old_locus_tag=AB25_1160;partial=true;pseudo=true;start_range=.,1 NZ_JJMC01000019.1 Protein Homology CDS 1 945 . - 0 ID=cds-AB25_RS19100;Parent=gene-AB25_RS19100;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB25_RS19100;partial=true;product=IS3-like element IS3 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJMC01000019.1 RefSeq pseudogene 1012 1539 . + . ID=gene-AB25_RS0124805;Name=AB25_RS0124805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS0124805;old_locus_tag=AB25_1162;partial=true;pseudo=true;start_range=.,1012 NZ_JJMC01000019.1 Protein Homology CDS 1012 1539 . + 0 ID=cds-AB25_RS0124805;Parent=gene-AB25_RS0124805;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309324.2;locus_tag=AB25_RS0124805;partial=true;product=ACP S-malonyltransferase;pseudo=true;start_range=.,1012;transl_table=11 NZ_JJMC01000019.1 RefSeq gene 1536 2522 . + . ID=gene-AB25_RS19090;Name=ycdU;gbkey=Gene;gene=ycdU;gene_biotype=protein_coding;locus_tag=AB25_RS19090;old_locus_tag=AB25_1163 NZ_JJMC01000019.1 Protein Homology CDS 1536 2522 . + 0 ID=cds-WP_000611856.1;Parent=gene-AB25_RS19090;Dbxref=GenBank:WP_000611856.1;Name=WP_000611856.1;gbkey=CDS;gene=ycdU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415548.1;locus_tag=AB25_RS19090;product=protein YcdU;protein_id=WP_000611856.1;transl_table=11 NZ_JJMC01000019.1 RefSeq gene 2715 2851 . - . ID=gene-AB25_RS27340;Name=AB25_RS27340;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AB25_RS27340 NZ_JJMC01000019.1 cmsearch ncRNA 2715 2851 . - . ID=rna-AB25_RS27340;Parent=gene-AB25_RS27340;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS27340;product=RtT sRNA NZ_JJMC01000019.1 cmsearch exon 2715 2851 . - . ID=exon-AB25_RS27340-1;Parent=rna-AB25_RS27340;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS27340;product=RtT sRNA NZ_JJMC01000019.1 RefSeq gene 3070 4155 . + . ID=gene-AB25_RS19085;Name=AB25_RS19085;end_range=4155,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS19085;old_locus_tag=AB25_1164;partial=true NZ_JJMC01000019.1 Protein Homology CDS 3070 4155 . + 0 ID=cds-WP_032295873.1-2;Parent=gene-AB25_RS19085;Dbxref=GenBank:WP_032295873.1;Name=WP_032295873.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=4155,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309326.1;locus_tag=AB25_RS19085;partial=true;product=tyrosine-type recombinase/integrase;protein_id=WP_032295873.1;transl_table=11 ##sequence-region NZ_JJMC01000020.1 1 5954 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000020.1 RefSeq region 1 5954 . + . ID=NZ_JJMC01000020.1:1..5954;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000020.1 RefSeq gene 63 410 . + . ID=gene-AB25_RS19080;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AB25_RS19080;old_locus_tag=AB25_1165 NZ_JJMC01000020.1 Protein Homology CDS 63 410 . + 0 ID=cds-WP_032178090.1;Parent=gene-AB25_RS19080;Dbxref=GenBank:WP_032178090.1;Name=WP_032178090.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311895.1;locus_tag=AB25_RS19080;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_032178090.1;transl_table=11 NZ_JJMC01000020.1 RefSeq pseudogene 460 1845 . + . ID=gene-AB25_RS0124820;Name=tnpC;gbkey=Gene;gene=tnpC;gene_biotype=pseudogene;locus_tag=AB25_RS0124820;old_locus_tag=AB25_1167;pseudo=true NZ_JJMC01000020.1 Protein Homology CDS 460 1845 . + 0 ID=cds-AB25_RS0124820;Parent=gene-AB25_RS0124820;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpC;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000998048.1;locus_tag=AB25_RS0124820;product=IS66 family transposase;pseudo=true;transl_table=11 NZ_JJMC01000020.1 RefSeq gene 2084 3442 . - . ID=gene-AB25_RS19075;Name=AB25_RS19075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS19075;old_locus_tag=AB25_1168 NZ_JJMC01000020.1 Protein Homology CDS 2084 3442 . - 0 ID=cds-WP_032295894.1;Parent=gene-AB25_RS19075;Dbxref=GenBank:WP_032295894.1;Name=WP_032295894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000823236.1;locus_tag=AB25_RS19075;product=esterase-like activity of phytase family protein;protein_id=WP_032295894.1;transl_table=11 NZ_JJMC01000020.1 RefSeq pseudogene 3724 3855 . + . ID=gene-AB25_RS30135;Name=AB25_RS30135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS30135;partial=true;pseudo=true;start_range=.,3724 NZ_JJMC01000020.1 Protein Homology CDS 3724 3855 . + 0 ID=cds-AB25_RS30135;Parent=gene-AB25_RS30135;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AB25_RS30135;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,3724;transl_table=11 NZ_JJMC01000020.1 RefSeq pseudogene 3938 4068 . + . ID=gene-AB25_RS32920;Name=AB25_RS32920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32920;partial=true;pseudo=true;start_range=.,3938 NZ_JJMC01000020.1 Protein Homology CDS 3938 4068 . + 0 ID=cds-AB25_RS32920;Parent=gene-AB25_RS32920;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004856299.1;locus_tag=AB25_RS32920;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,3938;transl_table=11 NZ_JJMC01000020.1 RefSeq gene 4193 4474 . - . ID=gene-AB25_RS19065;Name=AB25_RS19065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS19065;old_locus_tag=AB25_1170 NZ_JJMC01000020.1 Protein Homology CDS 4193 4474 . - 0 ID=cds-WP_223349491.1;Parent=gene-AB25_RS19065;Dbxref=GenBank:WP_223349491.1;Name=WP_223349491.1;Ontology_term=GO:0071468;gbkey=CDS;go_process=cellular response to acidic pH|0071468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016230781.1;locus_tag=AB25_RS19065;product=biofilm development regulator YmgB/AriR family protein;protein_id=WP_223349491.1;transl_table=11 NZ_JJMC01000020.1 RefSeq pseudogene 4789 4893 . - . ID=gene-AB25_RS27915;Name=AB25_RS27915;end_range=4893,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS27915;partial=true;pseudo=true NZ_JJMC01000020.1 Protein Homology CDS 4789 4893 . - 0 ID=cds-AB25_RS27915;Parent=gene-AB25_RS27915;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=4893,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB25_RS27915;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_JJMC01000020.1 RefSeq pseudogene 4887 5091 . - . ID=gene-AB25_RS32925;Name=AB25_RS32925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32925;partial=true;pseudo=true;start_range=.,4887 NZ_JJMC01000020.1 Protein Homology CDS 4887 5091 . - 0 ID=cds-AB25_RS32925;Parent=gene-AB25_RS32925;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB25_RS32925;partial=true;product=hypothetical protein;pseudo=true;start_range=.,4887;transl_table=11 NZ_JJMC01000020.1 RefSeq pseudogene 5129 5200 . + . ID=gene-AB25_RS31020;Name=AB25_RS31020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS31020;partial=true;pseudo=true;start_range=.,5129 NZ_JJMC01000020.1 Protein Homology CDS 5129 5200 . + 0 ID=cds-AB25_RS31020;Parent=gene-AB25_RS31020;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013446.6;locus_tag=AB25_RS31020;partial=true;product=hypothetical protein;pseudo=true;start_range=.,5129;transl_table=11 NZ_JJMC01000020.1 RefSeq pseudogene 5211 5908 . - . ID=gene-AB25_RS30140;Name=AB25_RS30140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS30140;pseudo=true NZ_JJMC01000020.1 Protein Homology CDS 5211 5908 . - 0 ID=cds-AB25_RS30140;Parent=gene-AB25_RS30140;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558153.1;locus_tag=AB25_RS30140;product=IS1 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJMC01000021.1 1 127415 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000021.1 RefSeq region 1 127415 . + . ID=NZ_JJMC01000021.1:1..127415;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000021.1 RefSeq gene 1 382 . + . ID=gene-AB25_RS0124825;Name=AB25_RS0124825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0124825;old_locus_tag=AB25_1174;partial=true;start_range=.,1 NZ_JJMC01000021.1 Protein Homology CDS 1 382 . + 1 ID=cds-WP_032295898.1;Parent=gene-AB25_RS0124825;Dbxref=GenBank:WP_032295898.1;Name=WP_032295898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309429.1;locus_tag=AB25_RS0124825;partial=true;product=antirestriction protein;protein_id=WP_032295898.1;start_range=.,1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 398 874 . + . ID=gene-AB25_RS19045;Name=AB25_RS19045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS19045;old_locus_tag=AB25_1175 NZ_JJMC01000021.1 Protein Homology CDS 398 874 . + 0 ID=cds-WP_001186726.1;Parent=gene-AB25_RS19045;Dbxref=GenBank:WP_001186726.1;Name=WP_001186726.1;Ontology_term=GO:0006508,GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309430.1;locus_tag=AB25_RS19045;product=JAB domain-containing protein;protein_id=WP_001186726.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 937 1158 . + . ID=gene-AB25_RS19040;Name=AB25_RS19040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS19040;old_locus_tag=AB25_1176 NZ_JJMC01000021.1 Protein Homology CDS 937 1158 . + 0 ID=cds-WP_000692298.1;Parent=gene-AB25_RS19040;Dbxref=GenBank:WP_000692298.1;Name=WP_000692298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309431.1;locus_tag=AB25_RS19040;product=DUF987 domain-containing protein;protein_id=WP_000692298.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 1177 1860 . + . ID=gene-AB25_RS19035;Name=AB25_RS19035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS19035;old_locus_tag=AB25_1177 NZ_JJMC01000021.1 Protein Homology CDS 1177 1860 . + 0 ID=cds-WP_000086768.1;Parent=gene-AB25_RS19035;Dbxref=GenBank:WP_000086768.1;Name=WP_000086768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000086769.1;locus_tag=AB25_RS19035;product=hypothetical protein;protein_id=WP_000086768.1;transl_table=11 NZ_JJMC01000021.1 RefSeq pseudogene 1871 2251 . + . ID=gene-AB25_RS31025;Name=AB25_RS31025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS31025;pseudo=true NZ_JJMC01000021.1 Protein Homology CDS 1871 2251 . + 0 ID=cds-AB25_RS31025;Parent=gene-AB25_RS31025;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001545732.1;locus_tag=AB25_RS31025;product=type IV toxin-antitoxin system YeeU family antitoxin;pseudo=true;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 2332 2715 . + . ID=gene-AB25_RS19030;Name=AB25_RS19030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS19030;old_locus_tag=AB25_1179 NZ_JJMC01000021.1 Protein Homology CDS 2332 2715 . + 0 ID=cds-WP_000854686.1;Parent=gene-AB25_RS19030;Dbxref=GenBank:WP_000854686.1;Name=WP_000854686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708773.1;locus_tag=AB25_RS19030;product=TA system toxin CbtA family protein;protein_id=WP_000854686.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 2712 3200 . + . ID=gene-AB25_RS19025;Name=AB25_RS19025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS19025;old_locus_tag=AB25_1180 NZ_JJMC01000021.1 Protein Homology CDS 2712 3200 . + 0 ID=cds-WP_001054233.1;Parent=gene-AB25_RS19025;Dbxref=GenBank:WP_001054233.1;Name=WP_001054233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708774.1;locus_tag=AB25_RS19025;product=DUF5983 family protein;protein_id=WP_001054233.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 3217 3414 . + . ID=gene-AB25_RS19020;Name=AB25_RS19020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS19020;old_locus_tag=AB25_1181 NZ_JJMC01000021.1 Protein Homology CDS 3217 3414 . + 0 ID=cds-WP_000839253.1;Parent=gene-AB25_RS19020;Dbxref=GenBank:WP_000839253.1;Name=WP_000839253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708775.1;locus_tag=AB25_RS19020;product=DUF957 domain-containing protein;protein_id=WP_000839253.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 3499 4341 . + . ID=gene-AB25_RS19015;Name=AB25_RS19015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS19015;old_locus_tag=AB25_1182 NZ_JJMC01000021.1 Protein Homology CDS 3499 4341 . + 0 ID=cds-WP_001431817.1;Parent=gene-AB25_RS19015;Dbxref=GenBank:WP_001431817.1;Name=WP_001431817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309436.1;locus_tag=AB25_RS19015;product=DUF4942 domain-containing protein;protein_id=WP_001431817.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 4491 4578 . - . ID=gene-AB25_RS19010;Name=AB25_RS19010;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS19010;old_locus_tag=AB25_1183 NZ_JJMC01000021.1 tRNAscan-SE tRNA 4491 4578 . - . ID=rna-AB25_RS19010;Parent=gene-AB25_RS19010;anticodon=(pos:complement(4542..4544));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS19010;product=tRNA-Ser NZ_JJMC01000021.1 tRNAscan-SE exon 4491 4578 . - . ID=exon-AB25_RS19010-1;Parent=rna-AB25_RS19010;anticodon=(pos:complement(4542..4544));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS19010;product=tRNA-Ser NZ_JJMC01000021.1 RefSeq gene 4812 5750 . + . ID=gene-AB25_RS19005;Name=ghrA;gbkey=Gene;gene=ghrA;gene_biotype=protein_coding;locus_tag=AB25_RS19005;old_locus_tag=AB25_1184 NZ_JJMC01000021.1 Protein Homology CDS 4812 5750 . + 0 ID=cds-WP_000351311.1;Parent=gene-AB25_RS19005;Dbxref=GenBank:WP_000351311.1;Name=WP_000351311.1;Ontology_term=GO:0016618,GO:0030267,GO:0051287;gbkey=CDS;gene=ghrA;go_function=hydroxypyruvate reductase [NAD(P)H] activity|0016618||IEA,glyoxylate reductase (NADPH) activity|0030267||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415551.2;locus_tag=AB25_RS19005;product=glyoxylate/hydroxypyruvate reductase GhrA;protein_id=WP_000351311.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 5805 6542 . + . ID=gene-AB25_RS19000;Name=ycdX;gbkey=Gene;gene=ycdX;gene_biotype=protein_coding;locus_tag=AB25_RS19000;old_locus_tag=AB25_1185 NZ_JJMC01000021.1 Protein Homology CDS 5805 6542 . + 0 ID=cds-WP_000283664.1;Parent=gene-AB25_RS19000;Dbxref=GenBank:WP_000283664.1;Name=WP_000283664.1;gbkey=CDS;gene=ycdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309438.1;locus_tag=AB25_RS19000;product=zinc-binding phosphatase;protein_id=WP_000283664.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 6566 7120 . + . ID=gene-AB25_RS18995;Name=ycdY;gbkey=Gene;gene=ycdY;gene_biotype=protein_coding;locus_tag=AB25_RS18995;old_locus_tag=AB25_1186 NZ_JJMC01000021.1 Protein Homology CDS 6566 7120 . + 0 ID=cds-WP_001001902.1;Parent=gene-AB25_RS18995;Dbxref=GenBank:WP_001001902.1;Name=WP_001001902.1;gbkey=CDS;gene=ycdY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309439.1;locus_tag=AB25_RS18995;product=molecular chaperone YcdY;protein_id=WP_001001902.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 7222 7713 . + . ID=gene-AB25_RS18990;Name=ycdZ;gbkey=Gene;gene=ycdZ;gene_biotype=protein_coding;locus_tag=AB25_RS18990;old_locus_tag=AB25_1188 NZ_JJMC01000021.1 Protein Homology CDS 7222 7713 . + 0 ID=cds-WP_001297187.1;Parent=gene-AB25_RS18990;Dbxref=GenBank:WP_001297187.1;Name=WP_001297187.1;Ontology_term=GO:0005886;gbkey=CDS;gene=ycdZ;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415554.4;locus_tag=AB25_RS18990;product=DUF1097 domain-containing protein;protein_id=WP_001297187.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 7777 8610 . - . ID=gene-AB25_RS18985;Name=csgG;gbkey=Gene;gene=csgG;gene_biotype=protein_coding;locus_tag=AB25_RS18985;old_locus_tag=AB25_1189 NZ_JJMC01000021.1 Protein Homology CDS 7777 8610 . - 0 ID=cds-WP_001189321.1;Parent=gene-AB25_RS18985;Dbxref=GenBank:WP_001189321.1;Name=WP_001189321.1;gbkey=CDS;gene=csgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309441.1;locus_tag=AB25_RS18985;product=curli production assembly/transport protein CsgG;protein_id=WP_001189321.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 8637 9053 . - . ID=gene-AB25_RS18980;Name=csgF;gbkey=Gene;gene=csgF;gene_biotype=protein_coding;locus_tag=AB25_RS18980;old_locus_tag=AB25_1190 NZ_JJMC01000021.1 Protein Homology CDS 8637 9053 . - 0 ID=cds-WP_001264088.1;Parent=gene-AB25_RS18980;Dbxref=GenBank:WP_001264088.1;Name=WP_001264088.1;gbkey=CDS;gene=csgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309442.1;locus_tag=AB25_RS18980;product=curli production assembly/transport protein CsgF;protein_id=WP_001264088.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 9078 9467 . - . ID=gene-AB25_RS18975;Name=csgE;gbkey=Gene;gene=csgE;gene_biotype=protein_coding;locus_tag=AB25_RS18975;old_locus_tag=AB25_1191 NZ_JJMC01000021.1 Protein Homology CDS 9078 9467 . - 0 ID=cds-WP_000833288.1;Parent=gene-AB25_RS18975;Dbxref=GenBank:WP_000833288.1;Name=WP_000833288.1;gbkey=CDS;gene=csgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309443.1;locus_tag=AB25_RS18975;product=curli production assembly/transport protein CsgE;protein_id=WP_000833288.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 9472 10122 . - . ID=gene-AB25_RS18970;Name=csgD;gbkey=Gene;gene=csgD;gene_biotype=protein_coding;locus_tag=AB25_RS18970;old_locus_tag=AB25_1192 NZ_JJMC01000021.1 Protein Homology CDS 9472 10122 . - 0 ID=cds-WP_000481500.1;Parent=gene-AB25_RS18970;Dbxref=GenBank:WP_000481500.1;Name=WP_000481500.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=csgD;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309444.1;locus_tag=AB25_RS18970;product=biofilm master transcriptional regulator CsgD;protein_id=WP_000481500.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 10876 11331 . + . ID=gene-AB25_RS18960;Name=csgB;gbkey=Gene;gene=csgB;gene_biotype=protein_coding;locus_tag=AB25_RS18960;old_locus_tag=AB25_1195 NZ_JJMC01000021.1 Protein Homology CDS 10876 11331 . + 0 ID=cds-WP_000791650.1;Parent=gene-AB25_RS18960;Dbxref=GenBank:WP_000791650.1;Name=WP_000791650.1;gbkey=CDS;gene=csgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309446.1;locus_tag=AB25_RS18960;product=curli minor subunit CsgB;protein_id=WP_000791650.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 11372 11827 . + . ID=gene-AB25_RS18955;Name=csgA;gbkey=Gene;gene=csgA;gene_biotype=protein_coding;locus_tag=AB25_RS18955;old_locus_tag=AB25_1196 NZ_JJMC01000021.1 Protein Homology CDS 11372 11827 . + 0 ID=cds-WP_000771437.1;Parent=gene-AB25_RS18955;Dbxref=GenBank:WP_000771437.1;Name=WP_000771437.1;gbkey=CDS;gene=csgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415560.1;locus_tag=AB25_RS18955;product=curli major subunit CsgA;protein_id=WP_000771437.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 11886 12218 . + . ID=gene-AB25_RS18950;Name=csgC;gbkey=Gene;gene=csgC;gene_biotype=protein_coding;locus_tag=AB25_RS18950;old_locus_tag=AB25_1197 NZ_JJMC01000021.1 Protein Homology CDS 11886 12218 . + 0 ID=cds-WP_000992831.1;Parent=gene-AB25_RS18950;Dbxref=GenBank:WP_000992831.1;Name=WP_000992831.1;gbkey=CDS;gene=csgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309448.1;locus_tag=AB25_RS18950;product=curli assembly chaperone CsgC;protein_id=WP_000992831.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 12339 12650 . + . ID=gene-AB25_RS18945;Name=ymdA;gbkey=Gene;gene=ymdA;gene_biotype=protein_coding;locus_tag=AB25_RS18945;old_locus_tag=AB25_1198 NZ_JJMC01000021.1 Protein Homology CDS 12339 12650 . + 0 ID=cds-WP_000489578.1;Parent=gene-AB25_RS18945;Dbxref=GenBank:WP_000489578.1;Name=WP_000489578.1;gbkey=CDS;gene=ymdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309449.1;locus_tag=AB25_RS18945;product=protein YmdA;protein_id=WP_000489578.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 12745 13278 . + . ID=gene-AB25_RS18940;Name=ymdB;gbkey=Gene;gene=ymdB;gene_biotype=protein_coding;locus_tag=AB25_RS18940;old_locus_tag=AB25_1199 NZ_JJMC01000021.1 Protein Homology CDS 12745 13278 . + 0 ID=cds-WP_000857399.1;Parent=gene-AB25_RS18940;Dbxref=GenBank:WP_000857399.1;Name=WP_000857399.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ymdB;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309450.1;locus_tag=AB25_RS18940;product=O-acetyl-ADP-ribose deacetylase;protein_id=WP_000857399.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 13220 14701 . + . ID=gene-AB25_RS18935;Name=clsC;gbkey=Gene;gene=clsC;gene_biotype=protein_coding;locus_tag=AB25_RS18935;old_locus_tag=AB25_1200 NZ_JJMC01000021.1 Protein Homology CDS 13220 14701 . + 0 ID=cds-WP_001307714.1;Parent=gene-AB25_RS18935;Dbxref=GenBank:WP_001307714.1;Name=WP_001307714.1;gbkey=CDS;gene=clsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706957.2;locus_tag=AB25_RS18935;product=cardiolipin synthase ClsC;protein_id=WP_001307714.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 14709 15866 . - . ID=gene-AB25_RS18930;Name=mdoC;gbkey=Gene;gene=mdoC;gene_biotype=protein_coding;locus_tag=AB25_RS18930;old_locus_tag=AB25_1201 NZ_JJMC01000021.1 Protein Homology CDS 14709 15866 . - 0 ID=cds-WP_032170656.1;Parent=gene-AB25_RS18930;Dbxref=GenBank:WP_032170656.1;Name=WP_032170656.1;Ontology_term=GO:0016740;gbkey=CDS;gene=mdoC;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706958.2;locus_tag=AB25_RS18930;product=glucans biosynthesis protein MdoC;protein_id=WP_032170656.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 16260 17795 . + . ID=gene-AB25_RS18920;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=protein_coding;locus_tag=AB25_RS18920;old_locus_tag=AB25_1203 NZ_JJMC01000021.1 Protein Homology CDS 16260 17795 . + 0 ID=cds-WP_001300662.1;Parent=gene-AB25_RS18920;Dbxref=GenBank:WP_001300662.1;Name=WP_001300662.1;gbkey=CDS;gene=mdoG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415566.1;locus_tag=AB25_RS18920;product=glucans biosynthesis protein MdoG;protein_id=WP_001300662.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 17788 20331 . + . ID=gene-AB25_RS18915;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=AB25_RS18915;old_locus_tag=AB25_1204 NZ_JJMC01000021.1 Protein Homology CDS 17788 20331 . + 0 ID=cds-WP_001295445.1;Parent=gene-AB25_RS18915;Dbxref=GenBank:WP_001295445.1;Name=WP_001295445.1;Ontology_term=GO:0016758;gbkey=CDS;gene=mdoH;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415567.1;locus_tag=AB25_RS18915;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=WP_001295445.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 20504 20731 . + . ID=gene-AB25_RS18910;Name=yceK;gbkey=Gene;gene=yceK;gene_biotype=protein_coding;locus_tag=AB25_RS18910;old_locus_tag=AB25_1205 NZ_JJMC01000021.1 Protein Homology CDS 20504 20731 . + 0 ID=cds-WP_001237205.1;Parent=gene-AB25_RS18910;Dbxref=GenBank:WP_001237205.1;Name=WP_001237205.1;gbkey=CDS;gene=yceK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309455.1;locus_tag=AB25_RS18910;product=YceK/YidQ family lipoprotein;protein_id=WP_001237205.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 20732 21106 . - . ID=gene-AB25_RS18905;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=protein_coding;locus_tag=AB25_RS18905;old_locus_tag=AB25_1206 NZ_JJMC01000021.1 Protein Homology CDS 20732 21106 . - 0 ID=cds-WP_000180056.1;Parent=gene-AB25_RS18905;Dbxref=GenBank:WP_000180056.1;Name=WP_000180056.1;gbkey=CDS;gene=msyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309456.2;locus_tag=AB25_RS18905;product=MysB family protein;protein_id=WP_000180056.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 21189 22415 . - . ID=gene-AB25_RS18900;Name=mdtG;gbkey=Gene;gene=mdtG;gene_biotype=protein_coding;locus_tag=AB25_RS18900;old_locus_tag=AB25_1207 NZ_JJMC01000021.1 Protein Homology CDS 21189 22415 . - 0 ID=cds-WP_000074172.1;Parent=gene-AB25_RS18900;Dbxref=GenBank:WP_000074172.1;Name=WP_000074172.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtG;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415571.1;locus_tag=AB25_RS18900;product=multidrug efflux MFS transporter MdtG;protein_id=WP_000074172.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 22587 23507 . - . ID=gene-AB25_RS18895;Name=lpxL;gbkey=Gene;gene=lpxL;gene_biotype=protein_coding;locus_tag=AB25_RS18895;old_locus_tag=AB25_1208 NZ_JJMC01000021.1 Protein Homology CDS 22587 23507 . - 0 ID=cds-WP_000183364.1;Parent=gene-AB25_RS18895;Dbxref=GenBank:WP_000183364.1;Name=WP_000183364.1;gbkey=CDS;gene=lpxL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309459.1;locus_tag=AB25_RS18895;product=kdo(2)-lipid IV(A) lauroyltransferase;protein_id=WP_000183364.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 23732 24784 . + . ID=gene-AB25_RS18890;Name=trhO;gbkey=Gene;gene=trhO;gene_biotype=protein_coding;locus_tag=AB25_RS18890;old_locus_tag=AB25_1209 NZ_JJMC01000021.1 Protein Homology CDS 23732 24784 . + 0 ID=cds-WP_001144616.1;Parent=gene-AB25_RS18890;Dbxref=GenBank:WP_001144616.1;Name=WP_001144616.1;gbkey=CDS;gene=trhO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706977.2;locus_tag=AB25_RS18890;product=rhodanese-related sulfurtransferase;protein_id=WP_001144616.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 24826 25401 . - . ID=gene-AB25_RS18885;Name=yceI;gbkey=Gene;gene=yceI;gene_biotype=protein_coding;locus_tag=AB25_RS18885;old_locus_tag=AB25_1210 NZ_JJMC01000021.1 Protein Homology CDS 24826 25401 . - 0 ID=cds-WP_000749261.1;Parent=gene-AB25_RS18885;Dbxref=GenBank:WP_000749261.1;Name=WP_000749261.1;gbkey=CDS;gene=yceI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309461.1;locus_tag=AB25_RS18885;product=YceI family protein;protein_id=WP_000749261.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 25405 25971 . - . ID=gene-AB25_RS18880;Name=yceJ;gbkey=Gene;gene=yceJ;gene_biotype=protein_coding;locus_tag=AB25_RS18880;old_locus_tag=AB25_1211 NZ_JJMC01000021.1 Protein Homology CDS 25405 25971 . - 0 ID=cds-WP_000011104.1;Parent=gene-AB25_RS18880;Dbxref=GenBank:WP_000011104.1;Name=WP_000011104.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;gene=yceJ;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309462.1;locus_tag=AB25_RS18880;product=cytochrome b;protein_id=WP_000011104.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 26232 26345 . - . ID=gene-AB25_RS18875;Name=AB25_RS18875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS18875;old_locus_tag=AB25_1213 NZ_JJMC01000021.1 Protein Homology CDS 26232 26345 . - 0 ID=cds-WP_000336806.1;Parent=gene-AB25_RS18875;Dbxref=GenBank:WP_000336806.1;Name=WP_000336806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706980.2;locus_tag=AB25_RS18875;product=DUF2770 family protein;protein_id=WP_000336806.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 26393 27511 . - . ID=gene-AB25_RS18870;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=AB25_RS18870;old_locus_tag=AB25_1214 NZ_JJMC01000021.1 Protein Homology CDS 26393 27511 . - 0 ID=cds-WP_000872805.1;Parent=gene-AB25_RS18870;Dbxref=GenBank:WP_000872805.1;Name=WP_000872805.1;Ontology_term=GO:0050131;gbkey=CDS;gene=solA;go_function=N-methyl-L-amino-acid oxidase activity|0050131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706981.1;locus_tag=AB25_RS18870;product=N-methyl-L-tryptophan oxidase;protein_id=WP_000872805.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 27626 27880 . - . ID=gene-AB25_RS18865;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;locus_tag=AB25_RS18865;old_locus_tag=AB25_1215 NZ_JJMC01000021.1 Protein Homology CDS 27626 27880 . - 0 ID=cds-WP_000414437.1;Parent=gene-AB25_RS18865;Dbxref=GenBank:WP_000414437.1;Name=WP_000414437.1;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309465.3;locus_tag=AB25_RS18865;product=biofilm formation regulator BssS;protein_id=WP_000414437.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 28170 28415 . - . ID=gene-AB25_RS18860;Name=dinI;gbkey=Gene;gene=dinI;gene_biotype=protein_coding;locus_tag=AB25_RS18860;old_locus_tag=AB25_1216 NZ_JJMC01000021.1 Protein Homology CDS 28170 28415 . - 0 ID=cds-WP_001217754.1;Parent=gene-AB25_RS18860;Dbxref=GenBank:WP_001217754.1;Name=WP_001217754.1;gbkey=CDS;gene=dinI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309466.1;locus_tag=AB25_RS18860;product=DNA damage-inducible protein I;protein_id=WP_001217754.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 28489 29535 . - . ID=gene-AB25_RS18855;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=AB25_RS18855;old_locus_tag=AB25_1217 NZ_JJMC01000021.1 Protein Homology CDS 28489 29535 . - 0 ID=cds-WP_000126556.1;Parent=gene-AB25_RS18855;Dbxref=GenBank:WP_000126556.1;Name=WP_000126556.1;Ontology_term=GO:0019856,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine nucleobase biosynthetic process|0019856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415580.1;locus_tag=AB25_RS18855;product=dihydroorotase;protein_id=WP_000126556.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 29641 30201 . - . ID=gene-AB25_RS18850;Name=yceB;gbkey=Gene;gene=yceB;gene_biotype=protein_coding;locus_tag=AB25_RS18850;old_locus_tag=AB25_1218 NZ_JJMC01000021.1 Protein Homology CDS 29641 30201 . - 0 ID=cds-WP_001295443.1;Parent=gene-AB25_RS18850;Dbxref=GenBank:WP_001295443.1;Name=WP_001295443.1;gbkey=CDS;gene=yceB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415581.1;locus_tag=AB25_RS18850;product=lipoprotein;protein_id=WP_001295443.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 30335 30982 . - . ID=gene-AB25_RS18845;Name=grxB;gbkey=Gene;gene=grxB;gene_biotype=protein_coding;locus_tag=AB25_RS18845;old_locus_tag=AB25_1219 NZ_JJMC01000021.1 Protein Homology CDS 30335 30982 . - 0 ID=cds-WP_000780912.1;Parent=gene-AB25_RS18845;Dbxref=GenBank:WP_000780912.1;Name=WP_000780912.1;Ontology_term=GO:0006749,GO:0004362,GO:0005515;gbkey=CDS;gene=grxB;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309469.1;locus_tag=AB25_RS18845;product=glutaredoxin 2;protein_id=WP_000780912.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 31046 32254 . - . ID=gene-AB25_RS18840;Name=mdtH;gbkey=Gene;gene=mdtH;gene_biotype=protein_coding;locus_tag=AB25_RS18840;old_locus_tag=AB25_1220 NZ_JJMC01000021.1 Protein Homology CDS 31046 32254 . - 0 ID=cds-WP_000092206.1;Parent=gene-AB25_RS18840;Dbxref=GenBank:WP_000092206.1;Name=WP_000092206.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtH;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415583.4;locus_tag=AB25_RS18840;product=multidrug efflux MFS transporter MdtH;protein_id=WP_000092206.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 32490 33074 . + . ID=gene-AB25_RS18835;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=AB25_RS18835;old_locus_tag=AB25_1221 NZ_JJMC01000021.1 Protein Homology CDS 32490 33074 . + 0 ID=cds-WP_000468186.1;Parent=gene-AB25_RS18835;Dbxref=GenBank:WP_000468186.1;Name=WP_000468186.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rimJ;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309471.1;locus_tag=AB25_RS18835;product=ribosomal protein S5-alanine N-acetyltransferase;protein_id=WP_000468186.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 33085 33732 . + . ID=gene-AB25_RS18830;Name=yceH;gbkey=Gene;gene=yceH;gene_biotype=protein_coding;locus_tag=AB25_RS18830;old_locus_tag=AB25_1222 NZ_JJMC01000021.1 Protein Homology CDS 33085 33732 . + 0 ID=cds-WP_000877120.1;Parent=gene-AB25_RS18830;Dbxref=GenBank:WP_000877120.1;Name=WP_000877120.1;gbkey=CDS;gene=yceH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309472.1;locus_tag=AB25_RS18830;product=YceH family protein;protein_id=WP_000877120.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 33734 34657 . + . ID=gene-AB25_RS18825;Name=yceM;gbkey=Gene;gene=yceM;gene_biotype=protein_coding;locus_tag=AB25_RS18825;old_locus_tag=AB25_1223 NZ_JJMC01000021.1 Protein Homology CDS 33734 34657 . + 0 ID=cds-WP_000736158.1;Parent=gene-AB25_RS18825;Dbxref=GenBank:WP_000736158.1;Name=WP_000736158.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;gene=yceM;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415586.1;locus_tag=AB25_RS18825;product=Gfo/Idh/MocA family protein;protein_id=WP_000736158.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 34767 36302 . + . ID=gene-AB25_RS18820;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=AB25_RS18820;old_locus_tag=AB25_1224 NZ_JJMC01000021.1 Protein Homology CDS 34767 36302 . + 0 ID=cds-WP_001050683.1;Parent=gene-AB25_RS18820;Dbxref=GenBank:WP_001050683.1;Name=WP_001050683.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309474.1;locus_tag=AB25_RS18820;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_001050683.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 36342 36758 . - . ID=gene-AB25_RS18815;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=protein_coding;locus_tag=AB25_RS18815;old_locus_tag=AB25_1225 NZ_JJMC01000021.1 Protein Homology CDS 36342 36758 . - 0 ID=cds-WP_000197355.1;Parent=gene-AB25_RS18815;Dbxref=GenBank:WP_000197355.1;Name=WP_000197355.1;gbkey=CDS;gene=flgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309475.1;locus_tag=AB25_RS18815;product=flagella biosynthesis chaperone FlgN;protein_id=WP_000197355.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 36763 37056 . - . ID=gene-AB25_RS18810;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=AB25_RS18810;old_locus_tag=AB25_1226 NZ_JJMC01000021.1 Protein Homology CDS 36763 37056 . - 0 ID=cds-WP_000020880.1;Parent=gene-AB25_RS18810;Dbxref=GenBank:WP_000020880.1;Name=WP_000020880.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415589.1;locus_tag=AB25_RS18810;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_000020880.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 37132 37791 . - . ID=gene-AB25_RS0124845;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=AB25_RS0124845;old_locus_tag=AB25_1227 NZ_JJMC01000021.1 Protein Homology CDS 37132 37791 . - 0 ID=cds-WP_000879698.1;Parent=gene-AB25_RS0124845;Dbxref=GenBank:WP_000879698.1;Name=WP_000879698.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309477.1;locus_tag=AB25_RS0124845;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_000879698.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 37946 38362 . + . ID=gene-AB25_RS18805;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=AB25_RS18805;old_locus_tag=AB25_1229 NZ_JJMC01000021.1 Protein Homology CDS 37946 38362 . + 0 ID=cds-WP_000884702.1;Parent=gene-AB25_RS18805;Dbxref=GenBank:WP_000884702.1;Name=WP_000884702.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415591.1;locus_tag=AB25_RS18805;product=flagellar basal body rod protein FlgB;protein_id=WP_000884702.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 38366 38770 . + . ID=gene-AB25_RS18800;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=AB25_RS18800;old_locus_tag=AB25_1230 NZ_JJMC01000021.1 Protein Homology CDS 38366 38770 . + 0 ID=cds-WP_001196460.1;Parent=gene-AB25_RS18800;Dbxref=GenBank:WP_001196460.1;Name=WP_001196460.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740734.1;locus_tag=AB25_RS18800;product=flagellar basal body rod protein FlgC;protein_id=WP_001196460.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 38782 39477 . + . ID=gene-AB25_RS18795;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=AB25_RS18795;old_locus_tag=AB25_1231 NZ_JJMC01000021.1 Protein Homology CDS 38782 39477 . + 0 ID=cds-WP_000020484.1;Parent=gene-AB25_RS18795;Dbxref=GenBank:WP_000020484.1;Name=WP_000020484.1;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309480.1;locus_tag=AB25_RS18795;product=flagellar hook assembly protein FlgD;protein_id=WP_000020484.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 39502 40707 . + . ID=gene-AB25_RS18790;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=AB25_RS18790;old_locus_tag=AB25_1232 NZ_JJMC01000021.1 Protein Homology CDS 39502 40707 . + 0 ID=cds-WP_000885878.1;Parent=gene-AB25_RS18790;Dbxref=GenBank:WP_000885878.1;Name=WP_000885878.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309481.1;locus_tag=AB25_RS18790;product=flagellar hook protein FlgE;protein_id=WP_000885878.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 40727 41482 . + . ID=gene-AB25_RS18785;Name=flgF;gbkey=Gene;gene=flgF;gene_biotype=protein_coding;locus_tag=AB25_RS18785;old_locus_tag=AB25_1233 NZ_JJMC01000021.1 Protein Homology CDS 40727 41482 . + 0 ID=cds-WP_000349316.1;Parent=gene-AB25_RS18785;Dbxref=GenBank:WP_000349316.1;Name=WP_000349316.1;gbkey=CDS;gene=flgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415595.1;locus_tag=AB25_RS18785;product=flagellar basal-body rod protein FlgF;protein_id=WP_000349316.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 41654 42436 . + . ID=gene-AB25_RS18780;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=AB25_RS18780;old_locus_tag=AB25_1234 NZ_JJMC01000021.1 Protein Homology CDS 41654 42436 . + 0 ID=cds-WP_000625837.1;Parent=gene-AB25_RS18780;Dbxref=GenBank:WP_000625837.1;Name=WP_000625837.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819466.1;locus_tag=AB25_RS18780;product=flagellar basal-body rod protein FlgG;protein_id=WP_000625837.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 42489 43187 . + . ID=gene-AB25_RS18775;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=AB25_RS18775;old_locus_tag=AB25_1235 NZ_JJMC01000021.1 Protein Homology CDS 42489 43187 . + 0 ID=cds-WP_001295442.1;Parent=gene-AB25_RS18775;Dbxref=GenBank:WP_001295442.1;Name=WP_001295442.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309484.1;locus_tag=AB25_RS18775;product=flagellar basal body L-ring protein FlgH;protein_id=WP_001295442.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 43199 44296 . + . ID=gene-AB25_RS18770;Name=flgI;gbkey=Gene;gene=flgI;gene_biotype=protein_coding;locus_tag=AB25_RS18770;old_locus_tag=AB25_1236 NZ_JJMC01000021.1 Protein Homology CDS 43199 44296 . + 0 ID=cds-WP_000589326.1;Parent=gene-AB25_RS18770;Dbxref=GenBank:WP_000589326.1;Name=WP_000589326.1;gbkey=CDS;gene=flgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415598.3;locus_tag=AB25_RS18770;product=flagellar basal body P-ring protein FlgI;protein_id=WP_000589326.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 44296 45237 . + . ID=gene-AB25_RS18765;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=AB25_RS18765;old_locus_tag=AB25_1237 NZ_JJMC01000021.1 Protein Homology CDS 44296 45237 . + 0 ID=cds-WP_001323587.1;Parent=gene-AB25_RS18765;Dbxref=GenBank:WP_001323587.1;Name=WP_001323587.1;Ontology_term=GO:0044780,GO:0016798;gbkey=CDS;gene=flgJ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415599.1;locus_tag=AB25_RS18765;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=WP_001323587.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 45303 46946 . + . ID=gene-AB25_RS18760;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=AB25_RS18760;old_locus_tag=AB25_1238 NZ_JJMC01000021.1 Protein Homology CDS 45303 46946 . + 0 ID=cds-WP_032170657.1;Parent=gene-AB25_RS18760;Dbxref=GenBank:WP_032170657.1;Name=WP_032170657.1;Ontology_term=GO:0044780,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415600.1;locus_tag=AB25_RS18760;product=flagellar hook-associated protein FlgK;protein_id=WP_032170657.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 46958 47911 . + . ID=gene-AB25_RS18755;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=AB25_RS18755;old_locus_tag=AB25_1239 NZ_JJMC01000021.1 Protein Homology CDS 46958 47911 . + 0 ID=cds-WP_001212754.1;Parent=gene-AB25_RS18755;Dbxref=GenBank:WP_001212754.1;Name=WP_001212754.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309488.1;locus_tag=AB25_RS18755;product=flagellar hook-associated protein FlgL;protein_id=WP_001212754.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 48108 51293 . - . ID=gene-AB25_RS18750;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=AB25_RS18750;old_locus_tag=AB25_1240 NZ_JJMC01000021.1 Protein Homology CDS 48108 51293 . - 0 ID=cds-WP_032170658.1;Parent=gene-AB25_RS18750;Dbxref=GenBank:WP_032170658.1;Name=WP_032170658.1;Ontology_term=GO:0006396,GO:0003723,GO:0008995;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,ribonuclease E activity|0008995||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309489.1;locus_tag=AB25_RS18750;product=ribonuclease E;protein_id=WP_032170658.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 51866 52825 . + . ID=gene-AB25_RS18745;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=AB25_RS18745;old_locus_tag=AB25_1241 NZ_JJMC01000021.1 Protein Homology CDS 51866 52825 . + 0 ID=cds-WP_000846343.1;Parent=gene-AB25_RS18745;Dbxref=GenBank:WP_000846343.1;Name=WP_000846343.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluC;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415604.1;locus_tag=AB25_RS18745;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=WP_000846343.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 52937 53521 . - . ID=gene-AB25_RS18740;Name=yceF;gbkey=Gene;gene=yceF;gene_biotype=protein_coding;locus_tag=AB25_RS18740;old_locus_tag=AB25_1242 NZ_JJMC01000021.1 Protein Homology CDS 52937 53521 . - 0 ID=cds-WP_001361901.1;Parent=gene-AB25_RS18740;Dbxref=GenBank:WP_001361901.1;Name=WP_001361901.1;gbkey=CDS;gene=yceF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415605.2;locus_tag=AB25_RS18740;product=7-methyl-GTP pyrophosphatase;protein_id=WP_001361901.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 53720 54241 . + . ID=gene-AB25_RS18735;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=AB25_RS18735;old_locus_tag=AB25_1243 NZ_JJMC01000021.1 Protein Homology CDS 53720 54241 . + 0 ID=cds-WP_001174481.1;Parent=gene-AB25_RS18735;Dbxref=GenBank:WP_001174481.1;Name=WP_001174481.1;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001174481.1;locus_tag=AB25_RS18735;product=23S rRNA accumulation protein YceD;protein_id=WP_001174481.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 54293 54466 . + . ID=gene-AB25_RS18730;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=AB25_RS18730;old_locus_tag=AB25_1244 NZ_JJMC01000021.1 Protein Homology CDS 54293 54466 . + 0 ID=cds-WP_000290727.1;Parent=gene-AB25_RS18730;Dbxref=GenBank:WP_000290727.1;Name=WP_000290727.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125993.1;locus_tag=AB25_RS18730;product=50S ribosomal protein L32;protein_id=WP_000290727.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 54547 55617 . + . ID=gene-AB25_RS18725;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=AB25_RS18725;old_locus_tag=AB25_1245 NZ_JJMC01000021.1 Protein Homology CDS 54547 55617 . + 0 ID=cds-WP_000197578.1;Parent=gene-AB25_RS18725;Dbxref=GenBank:WP_000197578.1;Name=WP_000197578.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415608.2;locus_tag=AB25_RS18725;product=phosphate acyltransferase PlsX;protein_id=WP_000197578.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 55685 56638 . + . ID=gene-AB25_RS18720;Name=fabH;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;locus_tag=AB25_RS18720;old_locus_tag=AB25_1246 NZ_JJMC01000021.1 Protein Homology CDS 55685 56638 . + 0 ID=cds-WP_000288132.1;Parent=gene-AB25_RS18720;Dbxref=GenBank:WP_000288132.1;Name=WP_000288132.1;gbkey=CDS;gene=fabH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129019.1;locus_tag=AB25_RS18720;product=beta-ketoacyl-ACP synthase III;protein_id=WP_000288132.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 56654 57583 . + . ID=gene-AB25_RS18715;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=AB25_RS18715;old_locus_tag=AB25_1247 NZ_JJMC01000021.1 Protein Homology CDS 56654 57583 . + 0 ID=cds-WP_000191372.1;Parent=gene-AB25_RS18715;Dbxref=GenBank:WP_000191372.1;Name=WP_000191372.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415610.1;locus_tag=AB25_RS18715;product=ACP S-malonyltransferase;protein_id=WP_000191372.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 57596 58330 . + . ID=gene-AB25_RS18710;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=AB25_RS18710;old_locus_tag=AB25_1248 NZ_JJMC01000021.1 Protein Homology CDS 57596 58330 . + 0 ID=cds-WP_001008535.1;Parent=gene-AB25_RS18710;Dbxref=GenBank:WP_001008535.1;Name=WP_001008535.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=AB25_RS18710;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_001008535.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 58541 58777 . + . ID=gene-AB25_RS18705;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=AB25_RS18705;old_locus_tag=AB25_1249 NZ_JJMC01000021.1 Protein Homology CDS 58541 58777 . + 0 ID=cds-WP_000103754.1;Parent=gene-AB25_RS18705;Dbxref=GenBank:WP_000103754.1;Name=WP_000103754.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535861.1;locus_tag=AB25_RS18705;product=acyl carrier protein;protein_id=WP_000103754.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 58865 60106 . + . ID=gene-AB25_RS18700;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=AB25_RS18700;old_locus_tag=AB25_1250 NZ_JJMC01000021.1 Protein Homology CDS 58865 60106 . + 0 ID=cds-WP_000044679.1;Parent=gene-AB25_RS18700;Dbxref=GenBank:WP_000044679.1;Name=WP_000044679.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309500.1;locus_tag=AB25_RS18700;product=beta-ketoacyl-ACP synthase II;protein_id=WP_000044679.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 60226 61035 . + . ID=gene-AB25_RS18695;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=AB25_RS18695;old_locus_tag=AB25_1251 NZ_JJMC01000021.1 Protein Homology CDS 60226 61035 . + 0 ID=cds-WP_000478703.1;Parent=gene-AB25_RS18695;Dbxref=GenBank:WP_000478703.1;Name=WP_000478703.1;Ontology_term=GO:0046656,GO:0008696,GO:0030170;gbkey=CDS;gene=pabC;go_function=4-amino-4-deoxychorismate lyase activity|0008696||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707012.1;locus_tag=AB25_RS18695;product=aminodeoxychorismate lyase;protein_id=WP_000478703.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 61038 62060 . + . ID=gene-AB25_RS18690;Name=yceG;gbkey=Gene;gene=yceG;gene_biotype=protein_coding;locus_tag=AB25_RS18690;old_locus_tag=AB25_1252 NZ_JJMC01000021.1 Protein Homology CDS 61038 62060 . + 0 ID=cds-WP_000756838.1;Parent=gene-AB25_RS18690;Dbxref=GenBank:WP_000756838.1;Name=WP_000756838.1;gbkey=CDS;gene=yceG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415615.1;locus_tag=AB25_RS18690;product=cell division protein YceG;protein_id=WP_000756838.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 62050 62691 . + . ID=gene-AB25_RS18685;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=AB25_RS18685;old_locus_tag=AB25_1253 NZ_JJMC01000021.1 Protein Homology CDS 62050 62691 . + 0 ID=cds-WP_001257000.1;Parent=gene-AB25_RS18685;Dbxref=GenBank:WP_001257000.1;Name=WP_001257000.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415616.1;locus_tag=AB25_RS18685;product=dTMP kinase;protein_id=WP_001257000.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 62688 63692 . + . ID=gene-AB25_RS18680;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=AB25_RS18680;old_locus_tag=AB25_1254 NZ_JJMC01000021.1 Protein Homology CDS 62688 63692 . + 0 ID=cds-WP_032170659.1;Parent=gene-AB25_RS18680;Dbxref=GenBank:WP_032170659.1;Name=WP_032170659.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;gene=holB;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309504.1;locus_tag=AB25_RS18680;product=DNA polymerase III subunit delta';protein_id=WP_032170659.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 63703 64500 . + . ID=gene-AB25_RS18675;Name=ycfH;gbkey=Gene;gene=ycfH;gene_biotype=protein_coding;locus_tag=AB25_RS18675;old_locus_tag=AB25_1255 NZ_JJMC01000021.1 Protein Homology CDS 63703 64500 . + 0 ID=cds-WP_000480245.1;Parent=gene-AB25_RS18675;Dbxref=GenBank:WP_000480245.1;Name=WP_000480245.1;Ontology_term=GO:0016788;gbkey=CDS;gene=ycfH;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309505.1;locus_tag=AB25_RS18675;product=metal-dependent hydrolase;protein_id=WP_000480245.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 64795 66228 . + . ID=gene-AB25_RS18670;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=AB25_RS18670;old_locus_tag=AB25_1256 NZ_JJMC01000021.1 Protein Homology CDS 64795 66228 . + 0 ID=cds-WP_000475719.1;Parent=gene-AB25_RS18670;Dbxref=GenBank:WP_000475719.1;Name=WP_000475719.1;Ontology_term=GO:0009401,GO:1904659,GO:0008982,GO:0055056;gbkey=CDS;gene=ptsG;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,D-glucose transmembrane transporter activity|0055056||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,D-glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000475716.1;locus_tag=AB25_RS18670;product=PTS glucose transporter subunit IIBC;protein_id=WP_000475719.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 66288 68477 . - . ID=gene-AB25_RS18665;Name=fhuE;gbkey=Gene;gene=fhuE;gene_biotype=protein_coding;locus_tag=AB25_RS18665;old_locus_tag=AB25_1257 NZ_JJMC01000021.1 Protein Homology CDS 66288 68477 . - 0 ID=cds-WP_000953451.1;Parent=gene-AB25_RS18665;Dbxref=GenBank:WP_000953451.1;Name=WP_000953451.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuE;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309507.1;locus_tag=AB25_RS18665;product=ferric-rhodotorulic acid/ferric-coprogen receptor FhuE;protein_id=WP_000953451.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 68811 69170 . + . ID=gene-AB25_RS18660;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=AB25_RS18660;old_locus_tag=AB25_1258 NZ_JJMC01000021.1 Protein Homology CDS 68811 69170 . + 0 ID=cds-WP_000807125.1;Parent=gene-AB25_RS18660;Dbxref=GenBank:WP_000807125.1;Name=WP_000807125.1;gbkey=CDS;gene=hinT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415621.3;locus_tag=AB25_RS18660;product=purine nucleoside phosphoramidase;protein_id=WP_000807125.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 69173 69550 . + . ID=gene-AB25_RS18655;Name=ycfL;gbkey=Gene;gene=ycfL;gene_biotype=protein_coding;locus_tag=AB25_RS18655;old_locus_tag=AB25_1259 NZ_JJMC01000021.1 Protein Homology CDS 69173 69550 . + 0 ID=cds-WP_001225276.1;Parent=gene-AB25_RS18655;Dbxref=GenBank:WP_001225276.1;Name=WP_001225276.1;gbkey=CDS;gene=ycfL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309509.1;locus_tag=AB25_RS18655;product=YcfL family protein;protein_id=WP_001225276.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 69564 70205 . + . ID=gene-AB25_RS18650;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=AB25_RS18650;old_locus_tag=AB25_1260 NZ_JJMC01000021.1 Protein Homology CDS 69564 70205 . + 0 ID=cds-WP_000164439.1;Parent=gene-AB25_RS18650;Dbxref=GenBank:WP_000164439.1;Name=WP_000164439.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309510.1;locus_tag=AB25_RS18650;product=penicillin-binding protein activator LpoB;protein_id=WP_000164439.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 70186 71010 . + . ID=gene-AB25_RS18645;Name=thiK;gbkey=Gene;gene=thiK;gene_biotype=protein_coding;locus_tag=AB25_RS18645;old_locus_tag=AB25_1261 NZ_JJMC01000021.1 Protein Homology CDS 70186 71010 . + 0 ID=cds-WP_032173425.1;Parent=gene-AB25_RS18645;Dbxref=GenBank:WP_032173425.1;Name=WP_032173425.1;Ontology_term=GO:0006772,GO:0016310,GO:0019165;gbkey=CDS;gene=thiK;go_function=thiamine kinase activity|0019165||IEA;go_process=thiamine metabolic process|0006772||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309511.1;locus_tag=AB25_RS18645;product=thiamine kinase;protein_id=WP_032173425.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 71021 72046 . + . ID=gene-AB25_RS18640;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=AB25_RS18640;old_locus_tag=AB25_1262 NZ_JJMC01000021.1 Protein Homology CDS 71021 72046 . + 0 ID=cds-WP_000529332.1;Parent=gene-AB25_RS18640;Dbxref=GenBank:WP_000529332.1;Name=WP_000529332.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415625.1;locus_tag=AB25_RS18640;product=beta-N-acetylhexosaminidase;protein_id=WP_000529332.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 72069 72611 . + . ID=gene-AB25_RS18635;Name=ycfP;gbkey=Gene;gene=ycfP;gene_biotype=protein_coding;locus_tag=AB25_RS18635;old_locus_tag=AB25_1263 NZ_JJMC01000021.1 Protein Homology CDS 72069 72611 . + 0 ID=cds-WP_000587933.1;Parent=gene-AB25_RS18635;Dbxref=GenBank:WP_000587933.1;Name=WP_000587933.1;gbkey=CDS;gene=ycfP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126033.1;locus_tag=AB25_RS18635;product=alpha/beta hydrolase YcfP;protein_id=WP_000587933.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 73019 74323 . + . ID=gene-AB25_RS18630;Name=ndh;gbkey=Gene;gene=ndh;gene_biotype=protein_coding;locus_tag=AB25_RS18630;old_locus_tag=AB25_1264 NZ_JJMC01000021.1 Protein Homology CDS 73019 74323 . + 0 ID=cds-WP_000211045.1;Parent=gene-AB25_RS18630;Dbxref=GenBank:WP_000211045.1;Name=WP_000211045.1;gbkey=CDS;gene=ndh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384716.1;locus_tag=AB25_RS18630;product=NADH-quinone dehydrogenase;protein_id=WP_000211045.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 74550 75089 . + . ID=gene-AB25_RS18625;Name=ycfJ;gbkey=Gene;gene=ycfJ;gene_biotype=protein_coding;locus_tag=AB25_RS18625;old_locus_tag=AB25_1265 NZ_JJMC01000021.1 Protein Homology CDS 74550 75089 . + 0 ID=cds-WP_001043459.1;Parent=gene-AB25_RS18625;Dbxref=GenBank:WP_001043459.1;Name=WP_001043459.1;gbkey=CDS;gene=ycfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415628.1;locus_tag=AB25_RS18625;product=glycine zipper 2TM domain-containing protein;protein_id=WP_001043459.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 75151 75783 . - . ID=gene-AB25_RS18620;Name=comR;gbkey=Gene;gene=comR;gene_biotype=protein_coding;locus_tag=AB25_RS18620;old_locus_tag=AB25_1266 NZ_JJMC01000021.1 Protein Homology CDS 75151 75783 . - 0 ID=cds-WP_000179805.1;Parent=gene-AB25_RS18620;Dbxref=GenBank:WP_000179805.1;Name=WP_000179805.1;gbkey=CDS;gene=comR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415629.4;locus_tag=AB25_RS18620;product=TetR family copper-responsive transcriptional repressor ComR;protein_id=WP_000179805.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 76024 76281 . + . ID=gene-AB25_RS18615;Name=bhsA;gbkey=Gene;gene=bhsA;gene_biotype=protein_coding;locus_tag=AB25_RS18615;old_locus_tag=AB25_1267 NZ_JJMC01000021.1 Protein Homology CDS 76024 76281 . + 0 ID=cds-WP_000800153.1;Parent=gene-AB25_RS18615;Dbxref=GenBank:WP_000800153.1;Name=WP_000800153.1;Ontology_term=GO:0006950,GO:0046688;gbkey=CDS;gene=bhsA;go_process=response to stress|0006950||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309517.1;locus_tag=AB25_RS18615;product=multiple stress resistance protein BhsA;protein_id=WP_000800153.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 76364 77326 . - . ID=gene-AB25_RS18610;Name=ldtC;gbkey=Gene;gene=ldtC;gene_biotype=protein_coding;locus_tag=AB25_RS18610;old_locus_tag=AB25_1268 NZ_JJMC01000021.1 Protein Homology CDS 76364 77326 . - 0 ID=cds-WP_077754635.1;Parent=gene-AB25_RS18610;Dbxref=GenBank:WP_077754635.1;Name=WP_077754635.1;gbkey=CDS;gene=ldtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415631.1;locus_tag=AB25_RS18610;product=L%2CD-transpeptidase LdtC;protein_id=WP_077754635.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 77470 80916 . - . ID=gene-AB25_RS18605;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=AB25_RS18605;old_locus_tag=AB25_1269 NZ_JJMC01000021.1 Protein Homology CDS 77470 80916 . - 0 ID=cds-WP_001356203.1;Parent=gene-AB25_RS18605;Dbxref=GenBank:WP_001356203.1;Name=WP_001356203.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415632.1;locus_tag=AB25_RS18605;product=transcription-repair coupling factor;protein_id=WP_001356203.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 81044 82117 . - . ID=gene-AB25_RS18600;Name=ycfT;gbkey=Gene;gene=ycfT;gene_biotype=protein_coding;locus_tag=AB25_RS18600;old_locus_tag=AB25_1270 NZ_JJMC01000021.1 Protein Homology CDS 81044 82117 . - 0 ID=cds-WP_000810250.1;Parent=gene-AB25_RS18600;Dbxref=GenBank:WP_000810250.1;Name=WP_000810250.1;gbkey=CDS;gene=ycfT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415633.1;locus_tag=AB25_RS18600;product=acyltransferase family protein;protein_id=WP_000810250.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 82379 83578 . + . ID=gene-AB25_RS18595;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=AB25_RS18595;old_locus_tag=AB25_1271 NZ_JJMC01000021.1 Protein Homology CDS 82379 83578 . + 0 ID=cds-WP_000284714.1;Parent=gene-AB25_RS18595;Dbxref=GenBank:WP_000284714.1;Name=WP_000284714.1;Ontology_term=GO:0042953,GO:0016020;gbkey=CDS;gene=lolC;go_component=membrane|0016020||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004976588.1;locus_tag=AB25_RS18595;product=lipoprotein-releasing ABC transporter permease subunit LolC;protein_id=WP_000284714.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 83571 84272 . + . ID=gene-AB25_RS18590;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=AB25_RS18590;old_locus_tag=AB25_1272 NZ_JJMC01000021.1 Protein Homology CDS 83571 84272 . + 0 ID=cds-WP_001033695.1;Parent=gene-AB25_RS18590;Dbxref=GenBank:WP_001033695.1;Name=WP_001033695.1;Ontology_term=GO:0042953,GO:0005524,GO:0016020;gbkey=CDS;gene=lolD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309522.2;locus_tag=AB25_RS18590;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_001033695.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 84272 85516 . + . ID=gene-AB25_RS18585;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=AB25_RS18585;old_locus_tag=AB25_1273 NZ_JJMC01000021.1 Protein Homology CDS 84272 85516 . + 0 ID=cds-WP_024168444.1;Parent=gene-AB25_RS18585;Dbxref=GenBank:WP_024168444.1;Name=WP_024168444.1;Ontology_term=GO:0042953;gbkey=CDS;gene=lolE;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707033.1;locus_tag=AB25_RS18585;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=WP_024168444.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 85545 86456 . + . ID=gene-AB25_RS18580;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=protein_coding;locus_tag=AB25_RS18580;old_locus_tag=AB25_1274 NZ_JJMC01000021.1 Protein Homology CDS 85545 86456 . + 0 ID=cds-WP_000291270.1;Parent=gene-AB25_RS18580;Dbxref=GenBank:WP_000291270.1;Name=WP_000291270.1;Ontology_term=GO:0045127;gbkey=CDS;gene=nagK;go_function=N-acetylglucosamine kinase activity|0045127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415637.1;locus_tag=AB25_RS18580;product=N-acetylglucosamine kinase;protein_id=WP_000291270.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 86472 87293 . + . ID=gene-AB25_RS18575;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=AB25_RS18575;old_locus_tag=AB25_1275 NZ_JJMC01000021.1 Protein Homology CDS 86472 87293 . + 0 ID=cds-WP_000952736.1;Parent=gene-AB25_RS18575;Dbxref=GenBank:WP_000952736.1;Name=WP_000952736.1;Ontology_term=GO:0070403;gbkey=CDS;gene=cobB;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309525.1;locus_tag=AB25_RS18575;product=Sir2 family NAD+-dependent deacetylase;protein_id=WP_000952736.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 87432 88220 . - . ID=gene-AB25_RS18570;Name=ycfZ;gbkey=Gene;gene=ycfZ;gene_biotype=protein_coding;locus_tag=AB25_RS18570;old_locus_tag=AB25_1276 NZ_JJMC01000021.1 Protein Homology CDS 87432 88220 . - 0 ID=cds-WP_000713472.1;Parent=gene-AB25_RS18570;Dbxref=GenBank:WP_000713472.1;Name=WP_000713472.1;Ontology_term=GO:0016791;gbkey=CDS;gene=ycfZ;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415639.1;locus_tag=AB25_RS18570;product=TPM domain-containing protein;protein_id=WP_000713472.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 88217 88678 . - . ID=gene-AB25_RS18565;Name=AB25_RS18565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS18565;old_locus_tag=AB25_1277 NZ_JJMC01000021.1 Protein Homology CDS 88217 88678 . - 0 ID=cds-WP_000076381.1;Parent=gene-AB25_RS18565;Dbxref=GenBank:WP_000076381.1;Name=WP_000076381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001460774.1;locus_tag=AB25_RS18565;product=DUF3592 domain-containing protein;protein_id=WP_000076381.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 88736 89782 . - . ID=gene-AB25_RS18560;Name=potD;gbkey=Gene;gene=potD;gene_biotype=protein_coding;locus_tag=AB25_RS18560;old_locus_tag=AB25_1278 NZ_JJMC01000021.1 Protein Homology CDS 88736 89782 . - 0 ID=cds-WP_000759317.1;Parent=gene-AB25_RS18560;Dbxref=GenBank:WP_000759317.1;Name=WP_000759317.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potD;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121082.1;locus_tag=AB25_RS18560;product=spermidine/putrescine ABC transporter substrate-binding protein PotD;protein_id=WP_000759317.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 89779 90573 . - . ID=gene-AB25_RS18555;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=AB25_RS18555;old_locus_tag=AB25_1279 NZ_JJMC01000021.1 Protein Homology CDS 89779 90573 . - 0 ID=cds-WP_000580308.1;Parent=gene-AB25_RS18555;Dbxref=GenBank:WP_000580308.1;Name=WP_000580308.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309527.1;locus_tag=AB25_RS18555;product=spermidine/putrescine ABC transporter permease PotC;protein_id=WP_000580308.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 90570 91427 . - . ID=gene-AB25_RS18550;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=AB25_RS18550;old_locus_tag=AB25_1280 NZ_JJMC01000021.1 Protein Homology CDS 90570 91427 . - 0 ID=cds-WP_000799401.1;Parent=gene-AB25_RS18550;Dbxref=GenBank:WP_000799401.1;Name=WP_000799401.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000799378.1;locus_tag=AB25_RS18550;product=spermidine/putrescine ABC transporter permease PotB;protein_id=WP_000799401.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 91411 92547 . - . ID=gene-AB25_RS18545;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=AB25_RS18545;old_locus_tag=AB25_1281 NZ_JJMC01000021.1 Protein Homology CDS 91411 92547 . - 0 ID=cds-WP_000531601.1;Parent=gene-AB25_RS18545;Dbxref=GenBank:WP_000531601.1;Name=WP_000531601.1;Ontology_term=GO:0015846,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=potA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309598.1;locus_tag=AB25_RS18545;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;protein_id=WP_000531601.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 92797 94023 . + . ID=gene-AB25_RS18535;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=AB25_RS18535;old_locus_tag=AB25_1283 NZ_JJMC01000021.1 Protein Homology CDS 92797 94023 . + 0 ID=cds-WP_000359457.1;Parent=gene-AB25_RS18535;Dbxref=GenBank:WP_000359457.1;Name=WP_000359457.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309599.1;locus_tag=AB25_RS18535;product=peptidase T;protein_id=WP_000359457.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 94072 95193 . - . ID=gene-AB25_RS18530;Name=roxA;gbkey=Gene;gene=roxA;gene_biotype=protein_coding;gene_synonym=ycfD;locus_tag=AB25_RS18530;old_locus_tag=AB25_1284 NZ_JJMC01000021.1 Protein Homology CDS 94072 95193 . - 0 ID=cds-WP_001295435.1;Parent=gene-AB25_RS18530;Dbxref=GenBank:WP_001295435.1;Name=WP_001295435.1;gbkey=CDS;gene=roxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309600.2;locus_tag=AB25_RS18530;product=[50S ribosomal protein L16]-arginine 3-hydroxylase;protein_id=WP_001295435.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 95269 96729 . - . ID=gene-AB25_RS18525;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;locus_tag=AB25_RS18525;old_locus_tag=AB25_1285 NZ_JJMC01000021.1 Protein Homology CDS 95269 96729 . - 0 ID=cds-WP_000735412.1;Parent=gene-AB25_RS18525;Dbxref=GenBank:WP_000735412.1;Name=WP_000735412.1;Ontology_term=GO:0000160,GO:0000155,GO:0004673,GO:0016772;gbkey=CDS;gene=phoQ;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415647.1;locus_tag=AB25_RS18525;product=two-component system sensor histidine kinase PhoQ;protein_id=WP_000735412.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 96729 97400 . - . ID=gene-AB25_RS18520;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=AB25_RS18520;old_locus_tag=AB25_1286 NZ_JJMC01000021.1 Protein Homology CDS 96729 97400 . - 0 ID=cds-WP_032170661.1;Parent=gene-AB25_RS18520;Dbxref=GenBank:WP_032170661.1;Name=WP_032170661.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415648.1;locus_tag=AB25_RS18520;product=two-component system response regulator PhoP;protein_id=WP_032170661.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 97569 98939 . - . ID=gene-AB25_RS18515;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=AB25_RS18515;old_locus_tag=AB25_1287 NZ_JJMC01000021.1 Protein Homology CDS 97569 98939 . - 0 ID=cds-WP_000423742.1;Parent=gene-AB25_RS18515;Dbxref=GenBank:WP_000423742.1;Name=WP_000423742.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950897.1;locus_tag=AB25_RS18515;product=adenylosuccinate lyase;protein_id=WP_000423742.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 98943 99584 . - . ID=gene-AB25_RS18510;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=AB25_RS18510;old_locus_tag=AB25_1288 NZ_JJMC01000021.1 Protein Homology CDS 98943 99584 . - 0 ID=cds-WP_001297479.1;Parent=gene-AB25_RS18510;Dbxref=GenBank:WP_001297479.1;Name=WP_001297479.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415650.1;locus_tag=AB25_RS18510;product=high frequency lysogenization protein HflD;protein_id=WP_001297479.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 99620 100726 . - . ID=gene-AB25_RS18505;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;gene_synonym=trmU;locus_tag=AB25_RS18505;old_locus_tag=AB25_1289 NZ_JJMC01000021.1 Protein Homology CDS 99620 100726 . - 0 ID=cds-WP_001297484.1;Parent=gene-AB25_RS18505;Dbxref=GenBank:WP_001297484.1;Name=WP_001297484.1;Ontology_term=GO:0002143,GO:0006396,GO:0004808,GO:0016783,GO:0005737;gbkey=CDS;gene=mnmA;go_component=cytoplasm|0005737||IEA;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415651.4;locus_tag=AB25_RS18505;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_001297484.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 100780 101241 . - . ID=gene-AB25_RS18500;Name=nudJ;gbkey=Gene;gene=nudJ;gene_biotype=protein_coding;locus_tag=AB25_RS18500;old_locus_tag=AB25_1290 NZ_JJMC01000021.1 Protein Homology CDS 100780 101241 . - 0 ID=cds-WP_000476093.1;Parent=gene-AB25_RS18500;Dbxref=GenBank:WP_000476093.1;Name=WP_000476093.1;gbkey=CDS;gene=nudJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309633.1;locus_tag=AB25_RS18500;product=phosphatase NudJ;protein_id=WP_000476093.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 101251 101904 . - . ID=gene-AB25_RS18495;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=protein_coding;locus_tag=AB25_RS18495;old_locus_tag=AB25_1291 NZ_JJMC01000021.1 Protein Homology CDS 101251 101904 . - 0 ID=cds-WP_001248691.1;Parent=gene-AB25_RS18495;Dbxref=GenBank:WP_001248691.1;Name=WP_001248691.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=rluE;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415653.4;locus_tag=AB25_RS18495;product=23S rRNA pseudouridine(2457) synthase RluE;protein_id=WP_001248691.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 102076 103326 . + . ID=gene-AB25_RS18490;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=AB25_RS18490;old_locus_tag=AB25_1292 NZ_JJMC01000021.1 Protein Homology CDS 102076 103326 . + 0 ID=cds-WP_000444487.1;Parent=gene-AB25_RS18490;Dbxref=GenBank:WP_000444487.1;Name=WP_000444487.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=AB25_RS18490;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_000444487.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 103496 105205 . + . ID=gene-AB25_RS18485;Name=AB25_RS18485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS18485;old_locus_tag=AB25_1293 NZ_JJMC01000021.1 Protein Homology CDS 103496 105205 . + 0 ID=cds-WP_021547447.1;Parent=gene-AB25_RS18485;Dbxref=GenBank:WP_021547447.1;Name=WP_021547447.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024573.6;locus_tag=AB25_RS18485;product=AAA family ATPase;protein_id=WP_021547447.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 105275 106135 . + . ID=gene-AB25_RS18480;Name=AB25_RS18480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS18480;old_locus_tag=AB25_1294 NZ_JJMC01000021.1 Protein Homology CDS 105275 106135 . + 0 ID=cds-WP_021547448.1;Parent=gene-AB25_RS18480;Dbxref=GenBank:WP_021547448.1;Name=WP_021547448.1;Ontology_term=GO:0032775,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=obsolete DNA methylation on adenine|0032775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827286.1;locus_tag=AB25_RS18480;product=DNA adenine methylase;protein_id=WP_021547448.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 106125 107255 . - . ID=gene-AB25_RS18475;Name=intE;gbkey=Gene;gene=intE;gene_biotype=protein_coding;locus_tag=AB25_RS18475;old_locus_tag=AB25_1295 NZ_JJMC01000021.1 Protein Homology CDS 106125 107255 . - 0 ID=cds-WP_032170662.1;Parent=gene-AB25_RS18475;Dbxref=GenBank:WP_032170662.1;Name=WP_032170662.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;gene=intE;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415658.1;locus_tag=AB25_RS18475;product=site-specific integrase;protein_id=WP_032170662.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 107236 107481 . - . ID=gene-AB25_RS27935;Name=xisE;gbkey=Gene;gene=xisE;gene_biotype=protein_coding;locus_tag=AB25_RS27935 NZ_JJMC01000021.1 Protein Homology CDS 107236 107481 . - 0 ID=cds-WP_071998848.1;Parent=gene-AB25_RS27935;Dbxref=GenBank:WP_071998848.1;Name=WP_071998848.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;gene=xisE;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012542206.1;locus_tag=AB25_RS27935;product=excisionase;protein_id=WP_071998848.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 107525 108073 . - . ID=gene-AB25_RS18470;Name=yfdR;gbkey=Gene;gene=yfdR;gene_biotype=protein_coding;locus_tag=AB25_RS18470;old_locus_tag=AB25_1296 NZ_JJMC01000021.1 Protein Homology CDS 107525 108073 . - 0 ID=cds-WP_032170663.1;Parent=gene-AB25_RS18470;Dbxref=GenBank:WP_032170663.1;Name=WP_032170663.1;gbkey=CDS;gene=yfdR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000008184.1;locus_tag=AB25_RS18470;product=5'-deoxynucleotidase;protein_id=WP_032170663.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 108201 109025 . - . ID=gene-AB25_RS18465;Name=yfdQ;gbkey=Gene;gene=yfdQ;gene_biotype=protein_coding;locus_tag=AB25_RS18465;old_locus_tag=AB25_1297 NZ_JJMC01000021.1 Protein Homology CDS 108201 109025 . - 0 ID=cds-WP_032170664.1;Parent=gene-AB25_RS18465;Dbxref=GenBank:WP_032170664.1;Name=WP_032170664.1;gbkey=CDS;gene=yfdQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416861.1;locus_tag=AB25_RS18465;product=YfdQ family protein;protein_id=WP_032170664.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 109091 109453 . - . ID=gene-AB25_RS18460;Name=yfdP;gbkey=Gene;gene=yfdP;gene_biotype=protein_coding;locus_tag=AB25_RS18460;old_locus_tag=AB25_1298 NZ_JJMC01000021.1 Protein Homology CDS 109091 109453 . - 0 ID=cds-WP_000135680.1;Parent=gene-AB25_RS18460;Dbxref=GenBank:WP_000135680.1;Name=WP_000135680.1;gbkey=CDS;gene=yfdP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416860.4;locus_tag=AB25_RS18460;product=protein YfdP;protein_id=WP_000135680.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 110176 110868 . - . ID=gene-AB25_RS18455;Name=AB25_RS18455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS18455;old_locus_tag=AB25_1299 NZ_JJMC01000021.1 Protein Homology CDS 110176 110868 . - 0 ID=cds-WP_001020632.1;Parent=gene-AB25_RS18455;Dbxref=GenBank:WP_001020632.1;Name=WP_001020632.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001358750.1;locus_tag=AB25_RS18455;product=XRE family transcriptional regulator;protein_id=WP_001020632.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 110966 111190 . + . ID=gene-AB25_RS18450;Name=AB25_RS18450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS18450;old_locus_tag=AB25_1300 NZ_JJMC01000021.1 Protein Homology CDS 110966 111190 . + 0 ID=cds-WP_050439153.1;Parent=gene-AB25_RS18450;Dbxref=GenBank:WP_050439153.1;Name=WP_050439153.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001191959.1;locus_tag=AB25_RS18450;product=helix-turn-helix domain-containing protein;protein_id=WP_050439153.1;transl_table=11 NZ_JJMC01000021.1 RefSeq pseudogene 111142 111717 . + . ID=gene-AB25_RS0124860;Name=AB25_RS0124860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS0124860;old_locus_tag=AB25_1301;partial=true;pseudo=true;start_range=.,111142 NZ_JJMC01000021.1 Protein Homology CDS 111142 111717 . + 0 ID=cds-AB25_RS0124860;Parent=gene-AB25_RS0124860;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009307,GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000799668.1;locus_tag=AB25_RS0124860;partial=true;product=site-specific DNA-methyltransferase;pseudo=true;start_range=.,111142;transl_table=11 NZ_JJMC01000021.1 RefSeq pseudogene 111815 112288 . + . ID=gene-AB25_RS18445;Name=AB25_RS18445;end_range=112288,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS18445;old_locus_tag=AB25_1302;partial=true;pseudo=true;start_range=.,111815 NZ_JJMC01000021.1 Protein Homology CDS 111815 112288 . + 0 ID=cds-AB25_RS18445;Parent=gene-AB25_RS18445;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=112288,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308869.1;locus_tag=AB25_RS18445;partial=true;product=phage tail tip protein J-related protein;pseudo=true;start_range=.,111815;transl_table=11 NZ_JJMC01000021.1 RefSeq pseudogene 112285 113961 . + . ID=gene-AB25_RS18440;Name=AB25_RS18440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS18440;old_locus_tag=AB25_1303;partial=true;pseudo=true;start_range=.,112285 NZ_JJMC01000021.1 Protein Homology CDS 112285 113961 . + 0 ID=cds-AB25_RS18440;Parent=gene-AB25_RS18440;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019062,GO:0046718;gbkey=CDS;go_process=virion attachment to host cell|0019062||IEA,symbiont entry into host cell|0046718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016244352.1;locus_tag=AB25_RS18440;partial=true;product=tail fiber protein;pseudo=true;start_range=.,112285;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 113961 114596 . + . ID=gene-AB25_RS18435;Name=AB25_RS18435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS18435;old_locus_tag=AB25_1304 NZ_JJMC01000021.1 Protein Homology CDS 113961 114596 . + 0 ID=cds-WP_050439154.1;Parent=gene-AB25_RS18435;Dbxref=GenBank:WP_050439154.1;Name=WP_050439154.1;Ontology_term=GO:0098004;gbkey=CDS;go_process=virus tail fiber assembly|0098004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000885598.1;locus_tag=AB25_RS18435;product=tail fiber assembly protein;protein_id=WP_050439154.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 115098 117086 . + . ID=gene-AB25_RS18430;Name=AB25_RS18430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS18430;old_locus_tag=AB25_1305 NZ_JJMC01000021.1 Protein Homology CDS 115098 117086 . + 0 ID=cds-WP_032170666.1;Parent=gene-AB25_RS18430;Dbxref=GenBank:WP_032170666.1;Name=WP_032170666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461694.1;locus_tag=AB25_RS18430;product=DEAD/DEAH box helicase;protein_id=WP_032170666.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 117083 117721 . + . ID=gene-AB25_RS18425;Name=AB25_RS18425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS18425;old_locus_tag=AB25_1306 NZ_JJMC01000021.1 Protein Homology CDS 117083 117721 . + 0 ID=cds-WP_032170667.1;Parent=gene-AB25_RS18425;Dbxref=GenBank:WP_032170667.1;Name=WP_032170667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000011690.1;locus_tag=AB25_RS18425;product=hypothetical protein;protein_id=WP_032170667.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 118173 119093 . - . ID=gene-AB25_RS18420;Name=AB25_RS18420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS18420;old_locus_tag=AB25_1307 NZ_JJMC01000021.1 Protein Homology CDS 118173 119093 . - 0 ID=cds-WP_032170668.1;Parent=gene-AB25_RS18420;Dbxref=GenBank:WP_032170668.1;Name=WP_032170668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001610639.1;locus_tag=AB25_RS18420;product=hypothetical protein;protein_id=WP_032170668.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 119317 119658 . - . ID=gene-AB25_RS18415;Name=AB25_RS18415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS18415;old_locus_tag=AB25_1308 NZ_JJMC01000021.1 Protein Homology CDS 119317 119658 . - 0 ID=cds-WP_224271434.1;Parent=gene-AB25_RS18415;Dbxref=GenBank:WP_224271434.1;Name=WP_224271434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000858440.1;locus_tag=AB25_RS18415;product=hypothetical protein;protein_id=WP_224271434.1;transl_table=11 NZ_JJMC01000021.1 RefSeq pseudogene 119809 119976 . + . ID=gene-AB25_RS27945;Name=AB25_RS27945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS27945;old_locus_tag=AB25_1309;partial=true;pseudo=true;start_range=.,119809 NZ_JJMC01000021.1 Protein Homology CDS 119809 119976 . + 0 ID=cds-AB25_RS27945;Parent=gene-AB25_RS27945;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309635.1;locus_tag=AB25_RS27945;partial=true;product=isocitrate/isopropylmalate family dehydrogenase;pseudo=true;start_range=.,119809;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 120079 120402 . - . ID=gene-AB25_RS0124865;Name=iraM;gbkey=Gene;gene=iraM;gene_biotype=protein_coding;locus_tag=AB25_RS0124865 NZ_JJMC01000021.1 Protein Homology CDS 120079 120402 . - 0 ID=cds-WP_001307134.1;Parent=gene-AB25_RS0124865;Dbxref=GenBank:WP_001307134.1;Name=WP_001307134.1;Ontology_term=GO:0043856,GO:0005737;gbkey=CDS;gene=iraM;go_component=cytoplasm|0005737||IEA;go_function=anti-sigma factor antagonist activity|0043856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415678.1;locus_tag=AB25_RS0124865;product=anti-adapter protein IraM;protein_id=WP_001307134.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 120655 120699 . - . ID=gene-AB25_RS31955;Name=AB25_RS31955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31955 NZ_JJMC01000021.1 Protein Homology CDS 120655 120699 . - 0 ID=cds-WP_120795380.1;Parent=gene-AB25_RS31955;Dbxref=GenBank:WP_120795380.1;Name=WP_120795380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518766.1;locus_tag=AB25_RS31955;product=protein YmgK;protein_id=WP_120795380.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 120935 121045 . - . ID=gene-AB25_RS31650;Name=AB25_RS31650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31650 NZ_JJMC01000021.1 Protein Homology CDS 120935 121045 . - 0 ID=cds-WP_032141808.1;Parent=gene-AB25_RS31650;Dbxref=GenBank:WP_032141808.1;Name=WP_032141808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518767.1;locus_tag=AB25_RS31650;product=hypothetical protein;protein_id=WP_032141808.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 121098 121502 . - . ID=gene-AB25_RS18410;Name=ycgX;gbkey=Gene;gene=ycgX;gene_biotype=protein_coding;locus_tag=AB25_RS18410;old_locus_tag=AB25_1310 NZ_JJMC01000021.1 Protein Homology CDS 121098 121502 . - 0 ID=cds-WP_000373101.1;Parent=gene-AB25_RS18410;Dbxref=GenBank:WP_000373101.1;Name=WP_000373101.1;gbkey=CDS;gene=ycgX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415679.1;locus_tag=AB25_RS18410;product=DUF1398 domain-containing protein;protein_id=WP_000373101.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 121723 122454 . - . ID=gene-AB25_RS18405;Name=bluR;gbkey=Gene;gene=bluR;gene_biotype=protein_coding;locus_tag=AB25_RS18405;old_locus_tag=AB25_1311 NZ_JJMC01000021.1 Protein Homology CDS 121723 122454 . - 0 ID=cds-WP_000332303.1;Parent=gene-AB25_RS18405;Dbxref=GenBank:WP_000332303.1;Name=WP_000332303.1;gbkey=CDS;gene=bluR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415680.1;locus_tag=AB25_RS18405;product=DNA-binding transcriptional repressor BluR;protein_id=WP_000332303.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 122659 123870 . - . ID=gene-AB25_RS18400;Name=bluF;gbkey=Gene;gene=bluF;gene_biotype=protein_coding;locus_tag=AB25_RS18400;old_locus_tag=AB25_1312 NZ_JJMC01000021.1 Protein Homology CDS 122659 123870 . - 0 ID=cds-WP_001299269.1;Parent=gene-AB25_RS18400;Dbxref=GenBank:WP_001299269.1;Name=WP_001299269.1;gbkey=CDS;gene=bluF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415681.1;locus_tag=AB25_RS18400;product=blue light-responsive regulator BluF;protein_id=WP_001299269.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 124184 124420 . + . ID=gene-AB25_RS18395;Name=ycgZ;gbkey=Gene;gene=ycgZ;gene_biotype=protein_coding;locus_tag=AB25_RS18395;old_locus_tag=AB25_1313 NZ_JJMC01000021.1 Protein Homology CDS 124184 124420 . + 0 ID=cds-WP_000554153.1;Parent=gene-AB25_RS18395;Dbxref=GenBank:WP_000554153.1;Name=WP_000554153.1;gbkey=CDS;gene=ycgZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415682.1;locus_tag=AB25_RS18395;product=regulatory protein YcgZ;protein_id=WP_000554153.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 124463 124735 . + . ID=gene-AB25_RS0124875;Name=ymgA;gbkey=Gene;gene=ymgA;gene_biotype=protein_coding;locus_tag=AB25_RS0124875 NZ_JJMC01000021.1 Protein Homology CDS 124463 124735 . + 0 ID=cds-WP_000858002.1;Parent=gene-AB25_RS0124875;Dbxref=GenBank:WP_000858002.1;Name=WP_000858002.1;gbkey=CDS;gene=ymgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415683.1;locus_tag=AB25_RS0124875;product=two-component-system connector protein YmgA;protein_id=WP_000858002.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 124764 125030 . + . ID=gene-AB25_RS18390;Name=ariR;gbkey=Gene;gene=ariR;gene_biotype=protein_coding;gene_synonym=ymgB;locus_tag=AB25_RS18390;old_locus_tag=AB25_1314 NZ_JJMC01000021.1 Protein Homology CDS 124764 125030 . + 0 ID=cds-WP_000888772.1;Parent=gene-AB25_RS18390;Dbxref=GenBank:WP_000888772.1;Name=WP_000888772.1;gbkey=CDS;gene=ariR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415684.1;locus_tag=AB25_RS18390;product=biofilm/acid-resistance regulator AriR;protein_id=WP_000888772.1;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 125143 125391 . + . ID=gene-AB25_RS0124880;Name=ymgC;gbkey=Gene;gene=ymgC;gene_biotype=protein_coding;locus_tag=AB25_RS0124880;old_locus_tag=AB25_1315 NZ_JJMC01000021.1 Protein Homology CDS 125143 125391 . + 0 ID=cds-WP_001352468.1;Parent=gene-AB25_RS0124880;Dbxref=GenBank:WP_001352468.1;Name=WP_001352468.1;gbkey=CDS;gene=ymgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415685.1;locus_tag=AB25_RS0124880;product=protein YmgC;protein_id=WP_001352468.1;transl_table=11 NZ_JJMC01000021.1 RefSeq pseudogene 125723 126379 . + . ID=gene-AB25_RS18385;Name=AB25_RS18385;end_range=126379,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS18385;old_locus_tag=AB25_1316;partial=true;pseudo=true NZ_JJMC01000021.1 Protein Homology CDS 125723 126379 . + 0 ID=cds-AB25_RS18385;Parent=gene-AB25_RS18385;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=126379,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707066.2;locus_tag=AB25_RS18385;partial=true;product=CSS-motif domain-containing protein;pseudo=true;transl_table=11 NZ_JJMC01000021.1 RefSeq gene 126444 127415 . + . ID=gene-AB25_RS18380;Name=AB25_RS18380;end_range=127415,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS18380;old_locus_tag=AB25_1317;partial=true NZ_JJMC01000021.1 Protein Homology CDS 126444 127415 . + 0 ID=cds-WP_032295907.1;Parent=gene-AB25_RS18380;Dbxref=GenBank:WP_032295907.1;Name=WP_032295907.1;Ontology_term=GO:0006313,GO:0004803;end_range=127415,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AB25_RS18380;partial=true;product=IS5-like element IS5 family transposase;protein_id=WP_032295907.1;transl_table=11 ##sequence-region NZ_JJMC01000022.1 1 12992 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000022.1 RefSeq region 1 12992 . + . ID=NZ_JJMC01000022.1:1..12992;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000022.1 RefSeq gene 8 988 . + . ID=gene-AB25_RS18375;Name=AB25_RS18375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS18375;old_locus_tag=AB25_1318 NZ_JJMC01000022.1 Protein Homology CDS 8 988 . + 0 ID=cds-WP_000019400.1;Parent=gene-AB25_RS18375;Dbxref=GenBank:WP_000019400.1;Name=WP_000019400.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416498.2;locus_tag=AB25_RS18375;product=IS5-like element IS5 family transposase;protein_id=WP_000019400.1;transl_table=11 NZ_JJMC01000022.1 RefSeq pseudogene 1134 2009 . + . ID=gene-AB25_RS18370;Name=AB25_RS18370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS18370;old_locus_tag=AB25_1319;partial=true;pseudo=true;start_range=.,1134 NZ_JJMC01000022.1 Protein Homology CDS 1134 2009 . + 0 ID=cds-AB25_RS18370;Parent=gene-AB25_RS18370;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415686.2;locus_tag=AB25_RS18370;partial=true;product=cyclic diguanylate phosphodiesterase;pseudo=true;start_range=.,1134;transl_table=11 NZ_JJMC01000022.1 RefSeq gene 2141 2359 . + . ID=gene-AB25_RS18365;Name=ymgF;gbkey=Gene;gene=ymgF;gene_biotype=protein_coding;locus_tag=AB25_RS18365;old_locus_tag=AB25_1320 NZ_JJMC01000022.1 Protein Homology CDS 2141 2359 . + 0 ID=cds-WP_001065861.1;Parent=gene-AB25_RS18365;Dbxref=GenBank:WP_001065861.1;Name=WP_001065861.1;Ontology_term=GO:0051301;gbkey=CDS;gene=ymgF;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588447.1;locus_tag=AB25_RS18365;product=cell division-associated protein YmgF;protein_id=WP_001065861.1;transl_table=11 NZ_JJMC01000022.1 RefSeq pseudogene 2759 5407 . + . ID=gene-AB25_RS18355;Name=AB25_RS18355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS18355;old_locus_tag=AB25_1323;pseudo=true NZ_JJMC01000022.1 Protein Homology CDS 2759 5407 . + 0 ID=cds-AB25_RS18355;Parent=gene-AB25_RS18355;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000768537.1;locus_tag=AB25_RS18355;product=ECIAI39_1904 family autotransporter adhesin;pseudo=true;transl_table=11 NZ_JJMC01000022.1 RefSeq gene 5464 5799 . - . ID=gene-AB25_RS18350;Name=ymgD;gbkey=Gene;gene=ymgD;gene_biotype=protein_coding;locus_tag=AB25_RS18350;old_locus_tag=AB25_1324 NZ_JJMC01000022.1 Protein Homology CDS 5464 5799 . - 0 ID=cds-WP_000979977.1;Parent=gene-AB25_RS18350;Dbxref=GenBank:WP_000979977.1;Name=WP_000979977.1;gbkey=CDS;gene=ymgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707068.1;locus_tag=AB25_RS18350;product=YmgD family protein;protein_id=WP_000979977.1;transl_table=11 NZ_JJMC01000022.1 RefSeq gene 5803 6147 . - . ID=gene-AB25_RS18345;Name=ymgG;gbkey=Gene;gene=ymgG;gene_biotype=protein_coding;locus_tag=AB25_RS18345;old_locus_tag=AB25_1325 NZ_JJMC01000022.1 Protein Homology CDS 5803 6147 . - 0 ID=cds-WP_000726974.1;Parent=gene-AB25_RS18345;Dbxref=GenBank:WP_000726974.1;Name=WP_000726974.1;gbkey=CDS;gene=ymgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415690.5;locus_tag=AB25_RS18345;product=YMGG-like glycine zipper-containing protein;protein_id=WP_000726974.1;transl_table=11 NZ_JJMC01000022.1 RefSeq gene 6149 6322 . - . ID=gene-AB25_RS0124890;Name=ymgI;gbkey=Gene;gene=ymgI;gene_biotype=protein_coding;locus_tag=AB25_RS0124890 NZ_JJMC01000022.1 Protein Homology CDS 6149 6322 . - 0 ID=cds-WP_000122462.1;Parent=gene-AB25_RS0124890;Dbxref=GenBank:WP_000122462.1;Name=WP_000122462.1;gbkey=CDS;gene=ymgI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165314.1;locus_tag=AB25_RS0124890;product=protein YmgI;protein_id=WP_000122462.1;transl_table=11 NZ_JJMC01000022.1 RefSeq gene 6423 6608 . + . ID=gene-AB25_RS27955;Name=ymgJ;gbkey=Gene;gene=ymgJ;gene_biotype=protein_coding;locus_tag=AB25_RS27955 NZ_JJMC01000022.1 Protein Homology CDS 6423 6608 . + 0 ID=cds-WP_001325743.1;Parent=gene-AB25_RS27955;Dbxref=GenBank:WP_001325743.1;Name=WP_001325743.1;gbkey=CDS;gene=ymgJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165315.1;locus_tag=AB25_RS27955;product=protein YmgJ;protein_id=WP_001325743.1;transl_table=11 NZ_JJMC01000022.1 RefSeq gene 6569 6688 . + . ID=gene-AB25_RS31655;Name=AB25_RS31655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31655;old_locus_tag=AB25_1326 NZ_JJMC01000022.1 Protein Homology CDS 6569 6688 . + 0 ID=cds-WP_001131446.1;Parent=gene-AB25_RS31655;Dbxref=GenBank:WP_001131446.1;Name=WP_001131446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001131457.1;locus_tag=AB25_RS31655;product=hypothetical protein;protein_id=WP_001131446.1;transl_table=11 NZ_JJMC01000022.1 RefSeq pseudogene 6723 7067 . + . ID=gene-AB25_RS18340;Name=AB25_RS18340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS18340;old_locus_tag=AB25_1327;partial=true;pseudo=true;start_range=.,6723 NZ_JJMC01000022.1 Protein Homology CDS 6723 7067 . + 0 ID=cds-AB25_RS18340;Parent=gene-AB25_RS18340;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311542.2;locus_tag=AB25_RS18340;partial=true;product=autotransporter outer membrane beta-barrel domain-containing protein;pseudo=true;start_range=.,6723;transl_table=11 NZ_JJMC01000022.1 RefSeq gene 7439 7705 . - . ID=gene-AB25_RS18335;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=AB25_RS18335;old_locus_tag=AB25_1328 NZ_JJMC01000022.1 Protein Homology CDS 7439 7705 . - 0 ID=cds-WP_001185665.1;Parent=gene-AB25_RS18335;Dbxref=GenBank:WP_001185665.1;Name=WP_001185665.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309695.1;locus_tag=AB25_RS18335;product=cell division topological specificity factor MinE;protein_id=WP_001185665.1;transl_table=11 NZ_JJMC01000022.1 RefSeq gene 7709 8521 . - . ID=gene-AB25_RS18330;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=AB25_RS18330;old_locus_tag=AB25_1329 NZ_JJMC01000022.1 Protein Homology CDS 7709 8521 . - 0 ID=cds-WP_000101055.1;Parent=gene-AB25_RS18330;Dbxref=GenBank:WP_000101055.1;Name=WP_000101055.1;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=AB25_RS18330;product=septum site-determining protein MinD;protein_id=WP_000101055.1;transl_table=11 NZ_JJMC01000022.1 RefSeq gene 8545 9240 . - . ID=gene-AB25_RS18325;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=AB25_RS18325;old_locus_tag=AB25_1330 NZ_JJMC01000022.1 Protein Homology CDS 8545 9240 . - 0 ID=cds-WP_000072536.1;Parent=gene-AB25_RS18325;Dbxref=GenBank:WP_000072536.1;Name=WP_000072536.1;Ontology_term=GO:0000918,GO:1901891,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA,regulation of cell septum assembly|1901891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309697.1;locus_tag=AB25_RS18325;product=septum site-determining protein MinC;protein_id=WP_000072536.1;transl_table=11 NZ_JJMC01000022.1 RefSeq gene 9760 10128 . + . ID=gene-AB25_RS18320;Name=ycgJ;gbkey=Gene;gene=ycgJ;gene_biotype=protein_coding;locus_tag=AB25_RS18320;old_locus_tag=AB25_1331 NZ_JJMC01000022.1 Protein Homology CDS 9760 10128 . + 0 ID=cds-WP_001056831.1;Parent=gene-AB25_RS18320;Dbxref=GenBank:WP_001056831.1;Name=WP_001056831.1;gbkey=CDS;gene=ycgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309698.1;locus_tag=AB25_RS18320;product=YcgJ family protein;protein_id=WP_001056831.1;transl_table=11 NZ_JJMC01000022.1 RefSeq gene 10248 10649 . - . ID=gene-AB25_RS18315;Name=pliG;gbkey=Gene;gene=pliG;gene_biotype=protein_coding;locus_tag=AB25_RS18315;old_locus_tag=AB25_1332 NZ_JJMC01000022.1 Protein Homology CDS 10248 10649 . - 0 ID=cds-WP_000695223.1;Parent=gene-AB25_RS18315;Dbxref=GenBank:WP_000695223.1;Name=WP_000695223.1;gbkey=CDS;gene=pliG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309699.1;locus_tag=AB25_RS18315;product=g-type lysoyme inhibitor PliG;protein_id=WP_000695223.1;transl_table=11 NZ_JJMC01000022.1 RefSeq gene 10891 11184 . + . ID=gene-AB25_RS0124900;Name=AB25_RS0124900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0124900;old_locus_tag=AB25_1333 NZ_JJMC01000022.1 Protein Homology CDS 10891 11184 . + 0 ID=cds-WP_001297679.1;Parent=gene-AB25_RS0124900;Dbxref=GenBank:WP_001297679.1;Name=WP_001297679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309701.2;locus_tag=AB25_RS0124900;product=YcgL domain-containing protein;protein_id=WP_001297679.1;transl_table=11 NZ_JJMC01000022.1 RefSeq gene 11256 11915 . + . ID=gene-AB25_RS18310;Name=ycgM;gbkey=Gene;gene=ycgM;gene_biotype=protein_coding;locus_tag=AB25_RS18310;old_locus_tag=AB25_1334 NZ_JJMC01000022.1 Protein Homology CDS 11256 11915 . + 0 ID=cds-WP_000284276.1;Parent=gene-AB25_RS18310;Dbxref=GenBank:WP_000284276.1;Name=WP_000284276.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ycgM;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309702.1;locus_tag=AB25_RS18310;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_000284276.1;transl_table=11 NZ_JJMC01000022.1 RefSeq gene 12007 12453 . + . ID=gene-AB25_RS18305;Name=ycgN;gbkey=Gene;gene=ycgN;gene_biotype=protein_coding;locus_tag=AB25_RS18305;old_locus_tag=AB25_1335 NZ_JJMC01000022.1 Protein Homology CDS 12007 12453 . + 0 ID=cds-WP_001306825.1;Parent=gene-AB25_RS18305;Dbxref=GenBank:WP_001306825.1;Name=WP_001306825.1;gbkey=CDS;gene=ycgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309703.5;locus_tag=AB25_RS18305;product=YcgN family cysteine cluster protein;protein_id=WP_001306825.1;transl_table=11 NZ_JJMC01000022.1 RefSeq pseudogene 12695 12992 . + . ID=gene-AB25_RS0124905;Name=AB25_RS0124905;end_range=12992,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS0124905;partial=true;pseudo=true NZ_JJMC01000022.1 Protein Homology CDS 12695 12992 . + 0 ID=cds-AB25_RS0124905;Parent=gene-AB25_RS0124905;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=12992,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB25_RS0124905;partial=true;product=IS1-like element transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJMC01000023.1 1 66513 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000023.1 RefSeq region 1 66513 . + . ID=NZ_JJMC01000023.1:1..66513;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000023.1 RefSeq pseudogene 1 619 . + . ID=gene-AB25_RS18300;Name=AB25_RS18300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS18300;old_locus_tag=AB25_1337;partial=true;pseudo=true;start_range=.,1 NZ_JJMC01000023.1 Protein Homology CDS 1 619 . + 2 ID=cds-AB25_RS18300;Parent=gene-AB25_RS18300;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=AB25_RS18300;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJMC01000023.1 RefSeq pseudogene 664 1574 . - . ID=gene-AB25_RS30175;Name=hlyE;gbkey=Gene;gene=hlyE;gene_biotype=pseudogene;locus_tag=AB25_RS30175;pseudo=true NZ_JJMC01000023.1 Protein Homology CDS 664 1574 . - 0 ID=cds-AB25_RS30175;Parent=gene-AB25_RS30175;Note=frameshifted;Ontology_term=GO:0044179,GO:0090729;gbkey=CDS;gene=hlyE;go_function=toxin activity|0090729||IEA;go_process=hemolysis in another organism|0044179||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415700.4;locus_tag=AB25_RS30175;product=hemolysin HlyE;pseudo=true;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 1947 2366 . + . ID=gene-AB25_RS18285;Name=umuD;gbkey=Gene;gene=umuD;gene_biotype=protein_coding;locus_tag=AB25_RS18285;old_locus_tag=AB25_1340 NZ_JJMC01000023.1 Protein Homology CDS 1947 2366 . + 0 ID=cds-WP_000897378.1;Parent=gene-AB25_RS18285;Dbxref=GenBank:WP_000897378.1;Name=WP_000897378.1;gbkey=CDS;gene=umuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309705.1;locus_tag=AB25_RS18285;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WP_000897378.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 2366 3634 . + . ID=gene-AB25_RS18280;Name=umuC;gbkey=Gene;gene=umuC;gene_biotype=protein_coding;locus_tag=AB25_RS18280;old_locus_tag=AB25_1341 NZ_JJMC01000023.1 Protein Homology CDS 2366 3634 . + 0 ID=cds-WP_000457616.1;Parent=gene-AB25_RS18280;Dbxref=GenBank:WP_000457616.1;Name=WP_000457616.1;gbkey=CDS;gene=umuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415702.1;locus_tag=AB25_RS18280;product=DNA polymerase V catalytic protein;protein_id=WP_000457616.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 3680 4210 . - . ID=gene-AB25_RS18275;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=AB25_RS18275;old_locus_tag=AB25_1342 NZ_JJMC01000023.1 Protein Homology CDS 3680 4210 . - 0 ID=cds-WP_000943462.1;Parent=gene-AB25_RS18275;Dbxref=GenBank:WP_000943462.1;Name=WP_000943462.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;gene=dsbB;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707082.2;locus_tag=AB25_RS18275;product=disulfide bond formation protein DsbB;protein_id=WP_000943462.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 4356 5897 . - . ID=gene-AB25_RS18270;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=AB25_RS18270;old_locus_tag=AB25_1343 NZ_JJMC01000023.1 Protein Homology CDS 4356 5897 . - 0 ID=cds-WP_000406391.1;Parent=gene-AB25_RS18270;Dbxref=GenBank:WP_000406391.1;Name=WP_000406391.1;Ontology_term=GO:0006814,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaB;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309708.1;locus_tag=AB25_RS18270;product=Na(+)/H(+) antiporter NhaB;protein_id=WP_000406391.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 6118 6837 . + . ID=gene-AB25_RS18265;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=AB25_RS18265;old_locus_tag=AB25_1344 NZ_JJMC01000023.1 Protein Homology CDS 6118 6837 . + 0 ID=cds-WP_000234823.1;Parent=gene-AB25_RS18265;Dbxref=GenBank:WP_000234823.1;Name=WP_000234823.1;Ontology_term=GO:0006355,GO:0019217,GO:0000062,GO:0003677,GO:0003700;gbkey=CDS;gene=fadR;go_function=fatty-acyl-CoA binding|0000062||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of fatty acid metabolic process|0019217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309709.1;locus_tag=AB25_RS18265;product=fatty acid metabolism transcriptional regulator FadR;protein_id=WP_000234823.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 6889 8421 . - . ID=gene-AB25_RS18260;Name=ycgB;gbkey=Gene;gene=ycgB;gene_biotype=protein_coding;locus_tag=AB25_RS18260;old_locus_tag=AB25_1345 NZ_JJMC01000023.1 Protein Homology CDS 6889 8421 . - 0 ID=cds-WP_000190855.1;Parent=gene-AB25_RS18260;Dbxref=GenBank:WP_000190855.1;Name=WP_000190855.1;gbkey=CDS;gene=ycgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309710.1;locus_tag=AB25_RS18260;product=SpoVR family protein;protein_id=WP_000190855.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 8751 10049 . + . ID=gene-AB25_RS18255;Name=dadA;gbkey=Gene;gene=dadA;gene_biotype=protein_coding;locus_tag=AB25_RS18255;old_locus_tag=AB25_1346 NZ_JJMC01000023.1 Protein Homology CDS 8751 10049 . + 0 ID=cds-WP_032170677.1;Parent=gene-AB25_RS18255;Dbxref=GenBank:WP_032170677.1;Name=WP_032170677.1;gbkey=CDS;gene=dadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309711.1;locus_tag=AB25_RS18255;product=D-amino acid dehydrogenase;protein_id=WP_032170677.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 10059 11129 . + . ID=gene-AB25_RS18250;Name=dadX;gbkey=Gene;gene=dadX;gene_biotype=protein_coding;locus_tag=AB25_RS18250;old_locus_tag=AB25_1347 NZ_JJMC01000023.1 Protein Homology CDS 10059 11129 . + 0 ID=cds-WP_000197848.1;Parent=gene-AB25_RS18250;Dbxref=GenBank:WP_000197848.1;Name=WP_000197848.1;Ontology_term=GO:0006522,GO:0008784;gbkey=CDS;gene=dadX;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309712.2;locus_tag=AB25_RS18250;product=catabolic alanine racemase DadX;protein_id=WP_000197848.1;transl_table=11 NZ_JJMC01000023.1 RefSeq pseudogene 11440 11580 . + . ID=gene-AB25_RS32930;Name=AB25_RS32930;end_range=11580,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32930;partial=true;pseudo=true NZ_JJMC01000023.1 Protein Homology CDS 11440 11580 . + 0 ID=cds-AB25_RS32930;Parent=gene-AB25_RS32930;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=11580,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049075.1;locus_tag=AB25_RS32930;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 11515 13251 . - . ID=gene-AB25_RS18245;Name=cvrA;gbkey=Gene;gene=cvrA;gene_biotype=protein_coding;locus_tag=AB25_RS18245;old_locus_tag=AB25_1349 NZ_JJMC01000023.1 Protein Homology CDS 11515 13251 . - 0 ID=cds-WP_032170678.1;Parent=gene-AB25_RS18245;Dbxref=GenBank:WP_032170678.1;Name=WP_032170678.1;Ontology_term=GO:0006813,GO:0006884,GO:0055085,GO:0051139,GO:0016020;gbkey=CDS;gene=cvrA;go_component=membrane|0016020||IEA;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA,cell volume homeostasis|0006884||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309713.2;locus_tag=AB25_RS18245;product=potassium/proton antiporter;protein_id=WP_032170678.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 13346 14260 . - . ID=gene-AB25_RS18240;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=AB25_RS18240;old_locus_tag=AB25_1350 NZ_JJMC01000023.1 Protein Homology CDS 13346 14260 . - 0 ID=cds-WP_000051548.1;Parent=gene-AB25_RS18240;Dbxref=GenBank:WP_000051548.1;Name=WP_000051548.1;gbkey=CDS;gene=ldcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415710.1;locus_tag=AB25_RS18240;product=muramoyltetrapeptide carboxypeptidase;protein_id=WP_000051548.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 14360 14971 . + . ID=gene-AB25_RS18235;Name=emtA;gbkey=Gene;gene=emtA;gene_biotype=protein_coding;locus_tag=AB25_RS18235;old_locus_tag=AB25_1351 NZ_JJMC01000023.1 Protein Homology CDS 14360 14971 . + 0 ID=cds-WP_001295616.1;Parent=gene-AB25_RS18235;Dbxref=GenBank:WP_001295616.1;Name=WP_001295616.1;gbkey=CDS;gene=emtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309714.2;locus_tag=AB25_RS18235;product=membrane-bound lytic murein transglycosylase EmtA;protein_id=WP_001295616.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 14973 15707 . - . ID=gene-AB25_RS18230;Name=ycgR;gbkey=Gene;gene=ycgR;gene_biotype=protein_coding;locus_tag=AB25_RS18230;old_locus_tag=AB25_1352 NZ_JJMC01000023.1 Protein Homology CDS 14973 15707 . - 0 ID=cds-WP_000020161.1;Parent=gene-AB25_RS18230;Dbxref=GenBank:WP_000020161.1;Name=WP_000020161.1;Ontology_term=GO:0071945,GO:0035438;gbkey=CDS;gene=ycgR;go_function=cyclic-di-GMP binding|0035438||IEA;go_process=regulation of bacterial-type flagellum-dependent cell motility by regulation of motor speed|0071945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415712.1;locus_tag=AB25_RS18230;product=flagellar brake protein YcgR;protein_id=WP_000020161.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 15908 16162 . + . ID=gene-AB25_RS18225;Name=ymgE;gbkey=Gene;gene=ymgE;gene_biotype=protein_coding;locus_tag=AB25_RS18225;old_locus_tag=AB25_1353 NZ_JJMC01000023.1 Protein Homology CDS 15908 16162 . + 0 ID=cds-WP_000511313.1;Parent=gene-AB25_RS18225;Dbxref=GenBank:WP_000511313.1;Name=WP_000511313.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ymgE;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309719.1;locus_tag=AB25_RS18225;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000511313.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 16340 16780 . + . ID=gene-AB25_RS18220;Name=ycgY;gbkey=Gene;gene=ycgY;gene_biotype=protein_coding;locus_tag=AB25_RS18220;old_locus_tag=AB25_1354 NZ_JJMC01000023.1 Protein Homology CDS 16340 16780 . + 0 ID=cds-WP_000615067.1;Parent=gene-AB25_RS18220;Dbxref=GenBank:WP_000615067.1;Name=WP_000615067.1;gbkey=CDS;gene=ycgY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415714.1;locus_tag=AB25_RS18220;product=protein YcgY;protein_id=WP_000615067.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 16859 18556 . - . ID=gene-AB25_RS18215;Name=treA;gbkey=Gene;gene=treA;gene_biotype=protein_coding;locus_tag=AB25_RS18215;old_locus_tag=AB25_1355 NZ_JJMC01000023.1 Protein Homology CDS 16859 18556 . - 0 ID=cds-WP_000841709.1;Parent=gene-AB25_RS18215;Dbxref=GenBank:WP_000841709.1;Name=WP_000841709.1;gbkey=CDS;gene=treA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415715.1;locus_tag=AB25_RS18215;product=alpha%2Calpha-trehalase;protein_id=WP_000841709.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 18876 20294 . - . ID=gene-AB25_RS18210;Name=dhaM;gbkey=Gene;gene=dhaM;gene_biotype=protein_coding;locus_tag=AB25_RS18210;old_locus_tag=AB25_1357 NZ_JJMC01000023.1 Protein Homology CDS 18876 20294 . - 0 ID=cds-WP_001299308.1;Parent=gene-AB25_RS18210;Dbxref=GenBank:WP_001299308.1;Name=WP_001299308.1;Ontology_term=GO:0009401,GO:0016310,GO:0019563,GO:0047324,GO:0016020;gbkey=CDS;gene=dhaM;go_component=membrane|0016020||IEA;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA,glycerol catabolic process|0019563||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415716.4;locus_tag=AB25_RS18210;product=dihydroxyacetone kinase phosphoryl donor subunit DhaM;protein_id=WP_001299308.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 20305 20937 . - . ID=gene-AB25_RS18205;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=protein_coding;locus_tag=AB25_RS18205;old_locus_tag=AB25_1358 NZ_JJMC01000023.1 Protein Homology CDS 20305 20937 . - 0 ID=cds-WP_000059412.1;Parent=gene-AB25_RS18205;Dbxref=GenBank:WP_000059412.1;Name=WP_000059412.1;Ontology_term=GO:0006071,GO:0047324;gbkey=CDS;gene=dhaL;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415717.1;locus_tag=AB25_RS18205;product=dihydroxyacetone kinase subunit DhaL;protein_id=WP_000059412.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 20948 22018 . - . ID=gene-AB25_RS18200;Name=dhaK;gbkey=Gene;gene=dhaK;gene_biotype=protein_coding;locus_tag=AB25_RS18200;old_locus_tag=AB25_1359 NZ_JJMC01000023.1 Protein Homology CDS 20948 22018 . - 0 ID=cds-WP_000733725.1;Parent=gene-AB25_RS18200;Dbxref=GenBank:WP_000733725.1;Name=WP_000733725.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaK;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415718.6;locus_tag=AB25_RS18200;product=dihydroxyacetone kinase subunit DhaK;protein_id=WP_000733725.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 22246 24165 . + . ID=gene-AB25_RS18195;Name=dhaR;gbkey=Gene;gene=dhaR;gene_biotype=protein_coding;locus_tag=AB25_RS18195;old_locus_tag=AB25_1360 NZ_JJMC01000023.1 Protein Homology CDS 22246 24165 . + 0 ID=cds-WP_032170679.1;Parent=gene-AB25_RS18195;Dbxref=GenBank:WP_032170679.1;Name=WP_032170679.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=dhaR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415719.2;locus_tag=AB25_RS18195;product=dihydroxyacetone kinase operon transcriptional regulator DhaR;protein_id=WP_032170679.1;transl_table=11 NZ_JJMC01000023.1 RefSeq pseudogene 24265 27150 . - . ID=gene-AB25_RS0124915;Name=ycgV;gbkey=Gene;gene=ycgV;gene_biotype=pseudogene;locus_tag=AB25_RS0124915;pseudo=true NZ_JJMC01000023.1 Protein Homology CDS 24265 27150 . - 0 ID=cds-AB25_RS0124915;Parent=gene-AB25_RS0124915;Note=internal stop;Ontology_term=GO:0019867;gbkey=CDS;gene=ycgV;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415720.1;locus_tag=AB25_RS0124915;product=autotransporter outer membrane beta-barrel domain-containing protein;pseudo=true;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 27990 29081 . - . ID=gene-AB25_RS18185;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=AB25_RS18185;old_locus_tag=AB25_1364 NZ_JJMC01000023.1 Protein Homology CDS 27990 29081 . - 0 ID=cds-WP_000505866.1;Parent=gene-AB25_RS18185;Dbxref=GenBank:WP_000505866.1;Name=WP_000505866.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=AB25_RS18185;product=redox-regulated ATPase YchF;protein_id=WP_000505866.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 29198 29782 . - . ID=gene-AB25_RS18180;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=AB25_RS18180;old_locus_tag=AB25_1365 NZ_JJMC01000023.1 Protein Homology CDS 29198 29782 . - 0 ID=cds-WP_000152933.1;Parent=gene-AB25_RS18180;Dbxref=GenBank:WP_000152933.1;Name=WP_000152933.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910438.1;locus_tag=AB25_RS18180;product=aminoacyl-tRNA hydrolase;protein_id=WP_000152933.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 30060 30338 . + . ID=gene-AB25_RS18175;Name=ychH;gbkey=Gene;gene=ychH;gene_biotype=protein_coding;locus_tag=AB25_RS18175;old_locus_tag=AB25_1366 NZ_JJMC01000023.1 Protein Homology CDS 30060 30338 . + 0 ID=cds-WP_000823885.1;Parent=gene-AB25_RS18175;Dbxref=GenBank:WP_000823885.1;Name=WP_000823885.1;gbkey=CDS;gene=ychH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309737.1;locus_tag=AB25_RS18175;product=stress-induced protein YchH;protein_id=WP_000823885.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 30393 32072 . - . ID=gene-AB25_RS18170;Name=dauA;gbkey=Gene;gene=dauA;gene_biotype=protein_coding;locus_tag=AB25_RS18170;old_locus_tag=AB25_1367 NZ_JJMC01000023.1 Protein Homology CDS 30393 32072 . - 0 ID=cds-WP_001033352.1;Parent=gene-AB25_RS18170;Dbxref=GenBank:WP_001033352.1;Name=WP_001033352.1;gbkey=CDS;gene=dauA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415724.2;locus_tag=AB25_RS18170;product=C4-dicarboxylic acid transporter DauA;protein_id=WP_001033352.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 32197 33144 . - . ID=gene-AB25_RS18165;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=AB25_RS18165;old_locus_tag=AB25_1368 NZ_JJMC01000023.1 Protein Homology CDS 32197 33144 . - 0 ID=cds-WP_001298109.1;Parent=gene-AB25_RS18165;Dbxref=GenBank:WP_001298109.1;Name=WP_001298109.1;gbkey=CDS;gene=prs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1;locus_tag=AB25_RS18165;product=ribose-phosphate diphosphokinase;protein_id=WP_001298109.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 33295 34146 . - . ID=gene-AB25_RS18160;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=AB25_RS18160;old_locus_tag=AB25_1369 NZ_JJMC01000023.1 Protein Homology CDS 33295 34146 . - 0 ID=cds-WP_001260323.1;Parent=gene-AB25_RS18160;Dbxref=GenBank:WP_001260323.1;Name=WP_001260323.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707117.1;locus_tag=AB25_RS18160;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_001260323.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 34146 34769 . - . ID=gene-AB25_RS18155;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=AB25_RS18155;old_locus_tag=AB25_1370 NZ_JJMC01000023.1 Protein Homology CDS 34146 34769 . - 0 ID=cds-WP_001130686.1;Parent=gene-AB25_RS18155;Dbxref=GenBank:WP_001130686.1;Name=WP_001130686.1;Ontology_term=GO:0015031,GO:0009279;gbkey=CDS;gene=lolB;go_component=cell outer membrane|0009279||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309741.1;locus_tag=AB25_RS18155;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_001130686.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 34983 36239 . + . ID=gene-AB25_RS18150;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=AB25_RS18150;old_locus_tag=AB25_1371 NZ_JJMC01000023.1 Protein Homology CDS 34983 36239 . + 0 ID=cds-WP_001324480.1;Parent=gene-AB25_RS18150;Dbxref=GenBank:WP_001324480.1;Name=WP_001324480.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041689438.1;locus_tag=AB25_RS18150;product=glutamyl-tRNA reductase;protein_id=WP_001324480.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 36281 37363 . + . ID=gene-AB25_RS18145;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=AB25_RS18145;old_locus_tag=AB25_1372 NZ_JJMC01000023.1 Protein Homology CDS 36281 37363 . + 0 ID=cds-WP_000804726.1;Parent=gene-AB25_RS18145;Dbxref=GenBank:WP_000804726.1;Name=WP_000804726.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132158.1;locus_tag=AB25_RS18145;product=peptide chain release factor 1;protein_id=WP_000804726.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 37363 38196 . + . ID=gene-AB25_RS18140;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=AB25_RS18140;old_locus_tag=AB25_1373 NZ_JJMC01000023.1 Protein Homology CDS 37363 38196 . + 0 ID=cds-WP_000456448.1;Parent=gene-AB25_RS18140;Dbxref=GenBank:WP_000456448.1;Name=WP_000456448.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309744.1;locus_tag=AB25_RS18140;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_000456448.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 38193 38585 . + . ID=gene-AB25_RS18135;Name=sirB2;gbkey=Gene;gene=sirB2;gene_biotype=protein_coding;locus_tag=AB25_RS18135;old_locus_tag=AB25_1374 NZ_JJMC01000023.1 Protein Homology CDS 38193 38585 . + 0 ID=cds-WP_000200376.1;Parent=gene-AB25_RS18135;Dbxref=GenBank:WP_000200376.1;Name=WP_000200376.1;gbkey=CDS;gene=sirB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415731.1;locus_tag=AB25_RS18135;product=invasion regulator SirB2;protein_id=WP_000200376.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 38589 39398 . + . ID=gene-AB25_RS18130;Name=sirB1;gbkey=Gene;gene=sirB1;gene_biotype=protein_coding;locus_tag=AB25_RS18130;old_locus_tag=AB25_1375 NZ_JJMC01000023.1 Protein Homology CDS 38589 39398 . + 0 ID=cds-WP_001257044.1;Parent=gene-AB25_RS18130;Dbxref=GenBank:WP_001257044.1;Name=WP_001257044.1;gbkey=CDS;gene=sirB1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309746.1;locus_tag=AB25_RS18130;product=invasion regulator SirB1;protein_id=WP_001257044.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 39434 40288 . + . ID=gene-AB25_RS18125;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=AB25_RS18125;old_locus_tag=AB25_1376 NZ_JJMC01000023.1 Protein Homology CDS 39434 40288 . + 0 ID=cds-WP_000811065.1;Parent=gene-AB25_RS18125;Dbxref=GenBank:WP_000811065.1;Name=WP_000811065.1;Ontology_term=GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126202.1;locus_tag=AB25_RS18125;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_000811065.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 40436 40543 . - . ID=gene-AB25_RS18120;Name=AB25_RS18120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS18120;old_locus_tag=AB25_1377 NZ_JJMC01000023.1 Protein Homology CDS 40436 40543 . - 0 ID=cds-WP_000170954.1;Parent=gene-AB25_RS18120;Dbxref=GenBank:WP_000170954.1;Name=WP_000170954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502614.1;locus_tag=AB25_RS18120;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_000170954.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 40972 41079 . - . ID=gene-AB25_RS18115;Name=AB25_RS18115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS18115;old_locus_tag=AB25_1378 NZ_JJMC01000023.1 Protein Homology CDS 40972 41079 . - 0 ID=cds-WP_000170963.1;Parent=gene-AB25_RS18115;Dbxref=GenBank:WP_000170963.1;Name=WP_000170963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025298.1;locus_tag=AB25_RS18115;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_000170963.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 41484 42584 . - . ID=gene-AB25_RS18110;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=AB25_RS18110;old_locus_tag=AB25_1379 NZ_JJMC01000023.1 Protein Homology CDS 41484 42584 . - 0 ID=cds-WP_001563968.1;Parent=gene-AB25_RS18110;Dbxref=GenBank:WP_001563968.1;Name=WP_001563968.1;gbkey=CDS;gene=chaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309748.1;locus_tag=AB25_RS18110;product=sodium-potassium/proton antiporter ChaA;protein_id=WP_001563968.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 42854 43084 . + . ID=gene-AB25_RS18105;Name=chaB;gbkey=Gene;gene=chaB;gene_biotype=protein_coding;locus_tag=AB25_RS18105;old_locus_tag=AB25_1380 NZ_JJMC01000023.1 Protein Homology CDS 42854 43084 . + 0 ID=cds-WP_001146442.1;Parent=gene-AB25_RS18105;Dbxref=GenBank:WP_001146442.1;Name=WP_001146442.1;gbkey=CDS;gene=chaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309749.1;locus_tag=AB25_RS18105;product=putative cation transport regulator ChaB;protein_id=WP_001146442.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 43242 43937 . + . ID=gene-AB25_RS18100;Name=chaC;gbkey=Gene;gene=chaC;gene_biotype=protein_coding;locus_tag=AB25_RS18100;old_locus_tag=AB25_1381 NZ_JJMC01000023.1 Protein Homology CDS 43242 43937 . + 0 ID=cds-WP_001297117.1;Parent=gene-AB25_RS18100;Dbxref=GenBank:WP_001297117.1;Name=WP_001297117.1;gbkey=CDS;gene=chaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415736.2;locus_tag=AB25_RS18100;product=glutathione-specific gamma-glutamylcyclotransferase;protein_id=WP_001297117.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 43981 44334 . - . ID=gene-AB25_RS18095;Name=ychN;gbkey=Gene;gene=ychN;gene_biotype=protein_coding;locus_tag=AB25_RS18095;old_locus_tag=AB25_1382 NZ_JJMC01000023.1 Protein Homology CDS 43981 44334 . - 0 ID=cds-WP_001169669.1;Parent=gene-AB25_RS18095;Dbxref=GenBank:WP_001169669.1;Name=WP_001169669.1;gbkey=CDS;gene=ychN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309751.1;locus_tag=AB25_RS18095;product=DsrE/F sulfur relay family protein YchN;protein_id=WP_001169669.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 44519 45913 . + . ID=gene-AB25_RS18090;Name=ychO;gbkey=Gene;gene=ychO;gene_biotype=protein_coding;gene_synonym=iatA;locus_tag=AB25_RS18090;old_locus_tag=AB25_1383 NZ_JJMC01000023.1 Protein Homology CDS 44519 45913 . + 0 ID=cds-WP_000086202.1;Parent=gene-AB25_RS18090;Dbxref=GenBank:WP_000086202.1;Name=WP_000086202.1;gbkey=CDS;gene=ychO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415738.2;locus_tag=AB25_RS18090;product=inverse autotransporter invasin YchO;protein_id=WP_000086202.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 45914 46564 . - . ID=gene-AB25_RS18085;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=AB25_RS18085;old_locus_tag=AB25_1384 NZ_JJMC01000023.1 Protein Homology CDS 45914 46564 . - 0 ID=cds-WP_000070491.1;Parent=gene-AB25_RS18085;Dbxref=GenBank:WP_000070491.1;Name=WP_000070491.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=narL;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309753.1;locus_tag=AB25_RS18085;product=two-component system response regulator NarL;protein_id=WP_000070491.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 46557 48353 . - . ID=gene-AB25_RS18080;Name=narX;gbkey=Gene;gene=narX;gene_biotype=protein_coding;locus_tag=AB25_RS18080;old_locus_tag=AB25_1385 NZ_JJMC01000023.1 Protein Homology CDS 46557 48353 . - 0 ID=cds-WP_001391691.1;Parent=gene-AB25_RS18080;Dbxref=GenBank:WP_001391691.1;Name=WP_001391691.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narX;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309754.1;locus_tag=AB25_RS18080;product=nitrate/nitrite two-component system sensor histidine kinase NarX;protein_id=WP_001391691.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 48692 50083 . + . ID=gene-AB25_RS18075;Name=narK;gbkey=Gene;gene=narK;gene_biotype=protein_coding;locus_tag=AB25_RS18075;old_locus_tag=AB25_1386 NZ_JJMC01000023.1 Protein Homology CDS 48692 50083 . + 0 ID=cds-WP_000019827.1;Parent=gene-AB25_RS18075;Dbxref=GenBank:WP_000019827.1;Name=WP_000019827.1;gbkey=CDS;gene=narK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415741.1;locus_tag=AB25_RS18075;product=nitrate transporter NarK;protein_id=WP_000019827.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 50476 54219 . + . ID=gene-AB25_RS18070;Name=narG;gbkey=Gene;gene=narG;gene_biotype=protein_coding;locus_tag=AB25_RS18070;old_locus_tag=AB25_1387 NZ_JJMC01000023.1 Protein Homology CDS 50476 54219 . + 0 ID=cds-WP_000032922.1;Parent=gene-AB25_RS18070;Dbxref=GenBank:WP_000032922.1;Name=WP_000032922.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narG;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309756.1;locus_tag=AB25_RS18070;product=nitrate reductase subunit alpha;protein_id=WP_000032922.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 54216 55754 . + . ID=gene-AB25_RS18065;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=AB25_RS18065;old_locus_tag=AB25_1388 NZ_JJMC01000023.1 Protein Homology CDS 54216 55754 . + 0 ID=cds-WP_000702650.1;Parent=gene-AB25_RS18065;Dbxref=GenBank:WP_000702650.1;Name=WP_000702650.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415743.1;locus_tag=AB25_RS18065;product=nitrate reductase subunit beta;protein_id=WP_000702650.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 55751 56461 . + . ID=gene-AB25_RS18060;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=AB25_RS18060;old_locus_tag=AB25_1389 NZ_JJMC01000023.1 Protein Homology CDS 55751 56461 . + 0 ID=cds-WP_032170680.1;Parent=gene-AB25_RS18060;Dbxref=GenBank:WP_032170680.1;Name=WP_032170680.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309758.1;locus_tag=AB25_RS18060;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_032170680.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 56461 57138 . + . ID=gene-AB25_RS18055;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=AB25_RS18055;old_locus_tag=AB25_1390 NZ_JJMC01000023.1 Protein Homology CDS 56461 57138 . + 0 ID=cds-WP_001160110.1;Parent=gene-AB25_RS18055;Dbxref=GenBank:WP_001160110.1;Name=WP_001160110.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309759.1;locus_tag=AB25_RS18055;product=respiratory nitrate reductase subunit gamma;protein_id=WP_001160110.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 57322 57453 . - . ID=gene-AB25_RS27175;Name=AB25_RS27175;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AB25_RS27175 NZ_JJMC01000023.1 cmsearch ncRNA 57322 57453 . - . ID=rna-AB25_RS27175;Parent=gene-AB25_RS27175;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS27175;product=RtT sRNA NZ_JJMC01000023.1 cmsearch exon 57322 57453 . - . ID=exon-AB25_RS27175-1;Parent=rna-AB25_RS27175;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS27175;product=RtT sRNA NZ_JJMC01000023.1 RefSeq gene 57500 57631 . - . ID=gene-AB25_RS27180;Name=AB25_RS27180;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AB25_RS27180 NZ_JJMC01000023.1 cmsearch ncRNA 57500 57631 . - . ID=rna-AB25_RS27180;Parent=gene-AB25_RS27180;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS27180;product=RtT sRNA NZ_JJMC01000023.1 cmsearch exon 57500 57631 . - . ID=exon-AB25_RS27180-1;Parent=rna-AB25_RS27180;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS27180;product=RtT sRNA NZ_JJMC01000023.1 RefSeq gene 57678 57809 . - . ID=gene-AB25_RS27185;Name=AB25_RS27185;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AB25_RS27185 NZ_JJMC01000023.1 cmsearch ncRNA 57678 57809 . - . ID=rna-AB25_RS27185;Parent=gene-AB25_RS27185;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS27185;product=RtT sRNA NZ_JJMC01000023.1 cmsearch exon 57678 57809 . - . ID=exon-AB25_RS27185-1;Parent=rna-AB25_RS27185;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS27185;product=RtT sRNA NZ_JJMC01000023.1 RefSeq gene 57856 57940 . - . ID=gene-AB25_RS18050;Name=AB25_RS18050;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS18050;old_locus_tag=AB25_1391 NZ_JJMC01000023.1 tRNAscan-SE tRNA 57856 57940 . - . ID=rna-AB25_RS18050;Parent=gene-AB25_RS18050;anticodon=(pos:complement(57904..57906));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS18050;product=tRNA-Tyr NZ_JJMC01000023.1 tRNAscan-SE exon 57856 57940 . - . ID=exon-AB25_RS18050-1;Parent=rna-AB25_RS18050;anticodon=(pos:complement(57904..57906));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS18050;product=tRNA-Tyr NZ_JJMC01000023.1 RefSeq gene 57975 58059 . - . ID=gene-AB25_RS18045;Name=AB25_RS18045;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS18045;old_locus_tag=AB25_1392 NZ_JJMC01000023.1 tRNAscan-SE tRNA 57975 58059 . - . ID=rna-AB25_RS18045;Parent=gene-AB25_RS18045;anticodon=(pos:complement(58023..58025));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS18045;product=tRNA-Tyr NZ_JJMC01000023.1 tRNAscan-SE exon 57975 58059 . - . ID=exon-AB25_RS18045-1;Parent=rna-AB25_RS18045;anticodon=(pos:complement(58023..58025));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS18045;product=tRNA-Tyr NZ_JJMC01000023.1 RefSeq gene 58094 58178 . - . ID=gene-AB25_RS18040;Name=AB25_RS18040;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS18040;old_locus_tag=AB25_1393 NZ_JJMC01000023.1 tRNAscan-SE tRNA 58094 58178 . - . ID=rna-AB25_RS18040;Parent=gene-AB25_RS18040;anticodon=(pos:complement(58142..58144));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS18040;product=tRNA-Tyr NZ_JJMC01000023.1 tRNAscan-SE exon 58094 58178 . - . ID=exon-AB25_RS18040-1;Parent=rna-AB25_RS18040;anticodon=(pos:complement(58142..58144));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS18040;product=tRNA-Tyr NZ_JJMC01000023.1 RefSeq gene 58213 58297 . - . ID=gene-AB25_RS18035;Name=AB25_RS18035;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS18035;old_locus_tag=AB25_1394 NZ_JJMC01000023.1 tRNAscan-SE tRNA 58213 58297 . - . ID=rna-AB25_RS18035;Parent=gene-AB25_RS18035;anticodon=(pos:complement(58261..58263));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS18035;product=tRNA-Tyr NZ_JJMC01000023.1 tRNAscan-SE exon 58213 58297 . - . ID=exon-AB25_RS18035-1;Parent=rna-AB25_RS18035;anticodon=(pos:complement(58261..58263));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS18035;product=tRNA-Tyr NZ_JJMC01000023.1 RefSeq gene 58457 59299 . - . ID=gene-AB25_RS18030;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=AB25_RS18030;old_locus_tag=AB25_1395 NZ_JJMC01000023.1 Protein Homology CDS 58457 59299 . - 0 ID=cds-WP_000555849.1;Parent=gene-AB25_RS18030;Dbxref=GenBank:WP_000555849.1;Name=WP_000555849.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707138.1;locus_tag=AB25_RS18030;product=formyltetrahydrofolate deformylase;protein_id=WP_000555849.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 59349 59807 . - . ID=gene-AB25_RS0124930;Name=ychJ;gbkey=Gene;gene=ychJ;gene_biotype=protein_coding;locus_tag=AB25_RS0124930;old_locus_tag=AB25_1396 NZ_JJMC01000023.1 Protein Homology CDS 59349 59807 . - 0 ID=cds-WP_001307143.1;Parent=gene-AB25_RS0124930;Dbxref=GenBank:WP_001307143.1;Name=WP_001307143.1;gbkey=CDS;gene=ychJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415749.1;locus_tag=AB25_RS0124930;product=YchJ family protein;protein_id=WP_001307143.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 59920 60825 . + . ID=gene-AB25_RS18025;Name=rssA;gbkey=Gene;gene=rssA;gene_biotype=protein_coding;locus_tag=AB25_RS18025;old_locus_tag=AB25_1397 NZ_JJMC01000023.1 Protein Homology CDS 59920 60825 . + 0 ID=cds-WP_001226476.1;Parent=gene-AB25_RS18025;Dbxref=GenBank:WP_001226476.1;Name=WP_001226476.1;Ontology_term=GO:0006629,GO:0004622;gbkey=CDS;gene=rssA;go_function=lysophospholipase activity|0004622||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707140.2;locus_tag=AB25_RS18025;product=patatin-like phospholipase RssA;protein_id=WP_001226476.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 60917 61930 . + . ID=gene-AB25_RS18020;Name=rssB;gbkey=Gene;gene=rssB;gene_biotype=protein_coding;locus_tag=AB25_RS18020;old_locus_tag=AB25_1398 NZ_JJMC01000023.1 Protein Homology CDS 60917 61930 . + 0 ID=cds-WP_000193447.1;Parent=gene-AB25_RS18020;Dbxref=GenBank:WP_000193447.1;Name=WP_000193447.1;Ontology_term=GO:0000160;gbkey=CDS;gene=rssB;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309764.1;locus_tag=AB25_RS18020;product=two-component system response regulator RssB;protein_id=WP_000193447.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 62132 63040 . + . ID=gene-AB25_RS18015;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=AB25_RS18015;old_locus_tag=AB25_1399 NZ_JJMC01000023.1 Protein Homology CDS 62132 63040 . + 0 ID=cds-WP_000718995.1;Parent=gene-AB25_RS18015;Dbxref=GenBank:WP_000718995.1;Name=WP_000718995.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309765.1;locus_tag=AB25_RS18015;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_000718995.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 63184 63597 . - . ID=gene-AB25_RS18010;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;locus_tag=AB25_RS18010;old_locus_tag=AB25_1400 NZ_JJMC01000023.1 Protein Homology CDS 63184 63597 . - 0 ID=cds-WP_001287378.1;Parent=gene-AB25_RS18010;Dbxref=GenBank:WP_001287378.1;Name=WP_001287378.1;Ontology_term=GO:0071824,GO:0003677;gbkey=CDS;gene=hns;go_function=DNA binding|0003677||IEA;go_process=protein-DNA complex organization|0071824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309766.1;locus_tag=AB25_RS18010;product=histone-like nucleoid-structuring protein H-NS;protein_id=WP_001287378.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 64201 64818 . + . ID=gene-AB25_RS18005;Name=tdk;gbkey=Gene;gene=tdk;gene_biotype=protein_coding;locus_tag=AB25_RS18005;old_locus_tag=AB25_1402 NZ_JJMC01000023.1 Protein Homology CDS 64201 64818 . + 0 ID=cds-WP_000068067.1;Parent=gene-AB25_RS18005;Dbxref=GenBank:WP_000068067.1;Name=WP_000068067.1;gbkey=CDS;gene=tdk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309767.1;locus_tag=AB25_RS18005;product=thymidine kinase;protein_id=WP_000068067.1;transl_table=11 NZ_JJMC01000023.1 RefSeq gene 65104 66450 . - . ID=gene-AB25_RS18000;Name=AB25_RS18000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS18000;old_locus_tag=AB25_1403 NZ_JJMC01000023.1 Protein Homology CDS 65104 66450 . - 0 ID=cds-WP_000483767.1;Parent=gene-AB25_RS18000;Dbxref=GenBank:WP_000483767.1;Name=WP_000483767.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707145.1;locus_tag=AB25_RS18000;product=IS4-like element IS4 family transposase;protein_id=WP_000483767.1;transl_table=11 ##sequence-region NZ_JJMC01000024.1 1 150707 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000024.1 RefSeq region 1 150707 . + . ID=NZ_JJMC01000024.1:1..150707;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000024.1 RefSeq gene 1 1326 . - . ID=gene-AB25_RS17995;Name=AB25_RS17995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS17995;old_locus_tag=AB25_1404;partial=true;start_range=.,1 NZ_JJMC01000024.1 Protein Homology CDS 1 1326 . - 0 ID=cds-WP_032295929.1;Parent=gene-AB25_RS17995;Dbxref=GenBank:WP_032295929.1;Name=WP_032295929.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707145.1;locus_tag=AB25_RS17995;partial=true;product=IS4 family transposase;protein_id=WP_032295929.1;start_range=.,1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 1434 4109 . - . ID=gene-AB25_RS17990;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=AB25_RS17990;old_locus_tag=AB25_1405 NZ_JJMC01000024.1 Protein Homology CDS 1434 4109 . - 0 ID=cds-WP_000301651.1;Parent=gene-AB25_RS17990;Dbxref=GenBank:WP_000301651.1;Name=WP_000301651.1;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309768.1;locus_tag=AB25_RS17990;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=WP_000301651.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 4502 4555 . + . ID=gene-AB25_RS32235;Name=ychE;gbkey=Gene;gene=ychE;gene_biotype=protein_coding;locus_tag=AB25_RS32235 NZ_JJMC01000024.1 Protein Homology CDS 4502 4555 . + 0 ID=cds-WP_211180492.1;Parent=gene-AB25_RS32235;Dbxref=GenBank:WP_211180492.1;Name=WP_211180492.1;gbkey=CDS;gene=ychE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051181.1;locus_tag=AB25_RS32235;product=protein YchT;protein_id=WP_211180492.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 4586 5233 . + . ID=gene-AB25_RS17985;Name=ychE;gbkey=Gene;gene=ychE;gene_biotype=protein_coding;locus_tag=AB25_RS17985;old_locus_tag=AB25_1406 NZ_JJMC01000024.1 Protein Homology CDS 4586 5233 . + 0 ID=cds-WP_000616560.1;Parent=gene-AB25_RS17985;Dbxref=GenBank:WP_000616560.1;Name=WP_000616560.1;gbkey=CDS;gene=ychE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415758.1;locus_tag=AB25_RS17985;product=NAAT family transporter YchE;protein_id=WP_000616560.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 5391 5687 . - . ID=gene-AB25_RS31660;Name=AB25_RS31660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31660 NZ_JJMC01000024.1 GeneMarkS-2+ CDS 5391 5687 . - 0 ID=cds-WP_001211521.1;Parent=gene-AB25_RS31660;Dbxref=GenBank:WP_001211521.1;Name=WP_001211521.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB25_RS31660;product=hypothetical protein;protein_id=WP_001211521.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 5971 7602 . + . ID=gene-AB25_RS17980;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=AB25_RS17980;old_locus_tag=AB25_1408 NZ_JJMC01000024.1 Protein Homology CDS 5971 7602 . + 0 ID=cds-WP_001297114.1;Parent=gene-AB25_RS17980;Dbxref=GenBank:WP_001297114.1;Name=WP_001297114.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=oppA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707150.2;locus_tag=AB25_RS17980;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WP_001297114.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 7688 8608 . + . ID=gene-AB25_RS17975;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=AB25_RS17975;old_locus_tag=AB25_1409 NZ_JJMC01000024.1 Protein Homology CDS 7688 8608 . + 0 ID=cds-WP_000911112.1;Parent=gene-AB25_RS17975;Dbxref=GenBank:WP_000911112.1;Name=WP_000911112.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=oppB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=AB25_RS17975;product=oligopeptide ABC transporter permease OppB;protein_id=WP_000911112.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 8623 9531 . + . ID=gene-AB25_RS17970;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=AB25_RS17970;old_locus_tag=AB25_1410 NZ_JJMC01000024.1 Protein Homology CDS 8623 9531 . + 0 ID=cds-WP_000979661.1;Parent=gene-AB25_RS17970;Dbxref=GenBank:WP_000979661.1;Name=WP_000979661.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=AB25_RS17970;product=oligopeptide ABC transporter permease OppC;protein_id=WP_000979661.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 9543 10556 . + . ID=gene-AB25_RS17965;Name=oppD;gbkey=Gene;gene=oppD;gene_biotype=protein_coding;locus_tag=AB25_RS17965;old_locus_tag=AB25_1411 NZ_JJMC01000024.1 Protein Homology CDS 9543 10556 . + 0 ID=cds-WP_000110945.1;Parent=gene-AB25_RS17965;Dbxref=GenBank:WP_000110945.1;Name=WP_000110945.1;gbkey=CDS;gene=oppD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309773.1;locus_tag=AB25_RS17965;product=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD;protein_id=WP_000110945.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 10553 11557 . + . ID=gene-AB25_RS17960;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=AB25_RS17960;old_locus_tag=AB25_1412 NZ_JJMC01000024.1 Protein Homology CDS 10553 11557 . + 0 ID=cds-WP_000994905.1;Parent=gene-AB25_RS17960;Dbxref=GenBank:WP_000994905.1;Name=WP_000994905.1;gbkey=CDS;gene=oppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309774.1;locus_tag=AB25_RS17960;product=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF;protein_id=WP_000994905.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 11610 11939 . - . ID=gene-AB25_RS17955;Name=yciU;gbkey=Gene;gene=yciU;gene_biotype=protein_coding;locus_tag=AB25_RS17955;old_locus_tag=AB25_1413 NZ_JJMC01000024.1 Protein Homology CDS 11610 11939 . - 0 ID=cds-WP_000366959.1;Parent=gene-AB25_RS17955;Dbxref=GenBank:WP_000366959.1;Name=WP_000366959.1;gbkey=CDS;gene=yciU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309775.2;locus_tag=AB25_RS17955;product=HI1450 family dsDNA-mimic protein;protein_id=WP_000366959.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 11974 13434 . - . ID=gene-AB25_RS17950;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=AB25_RS17950;old_locus_tag=AB25_1414 NZ_JJMC01000024.1 Protein Homology CDS 11974 13434 . - 0 ID=cds-WP_000214516.1;Parent=gene-AB25_RS17950;Dbxref=GenBank:WP_000214516.1;Name=WP_000214516.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1;locus_tag=AB25_RS17950;product=cardiolipin synthase;protein_id=WP_000214516.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 13577 13750 . + . ID=gene-AB25_RS31665;Name=yciY;gbkey=Gene;gene=yciY;gene_biotype=protein_coding;locus_tag=AB25_RS31665 NZ_JJMC01000024.1 Protein Homology CDS 13577 13750 . + 0 ID=cds-WP_001309467.1;Parent=gene-AB25_RS31665;Dbxref=GenBank:WP_001309467.1;Name=WP_001309467.1;gbkey=CDS;gene=yciY;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165316.1;locus_tag=AB25_RS31665;product=YciY family protein;protein_id=WP_001309467.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 13805 15058 . - . ID=gene-AB25_RS17945;Name=kch;gbkey=Gene;gene=kch;gene_biotype=protein_coding;locus_tag=AB25_RS17945;old_locus_tag=AB25_1415 NZ_JJMC01000024.1 Protein Homology CDS 13805 15058 . - 0 ID=cds-WP_000020078.1;Parent=gene-AB25_RS17945;Dbxref=GenBank:WP_000020078.1;Name=WP_000020078.1;gbkey=CDS;gene=kch;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309777.1;locus_tag=AB25_RS17945;product=voltage-gated potassium channel protein;protein_id=WP_000020078.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 15358 15654 . - . ID=gene-AB25_RS17940;Name=yciI;gbkey=Gene;gene=yciI;gene_biotype=protein_coding;locus_tag=AB25_RS17940;old_locus_tag=AB25_1416 NZ_JJMC01000024.1 Protein Homology CDS 15358 15654 . - 0 ID=cds-WP_000967595.1;Parent=gene-AB25_RS17940;Dbxref=GenBank:WP_000967595.1;Name=WP_000967595.1;gbkey=CDS;gene=yciI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415767.2;locus_tag=AB25_RS17940;product=YciI family protein;protein_id=WP_000967595.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 15878 16585 . + . ID=gene-AB25_RS17935;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=AB25_RS17935;old_locus_tag=AB25_1417 NZ_JJMC01000024.1 Protein Homology CDS 15878 16585 . + 0 ID=cds-WP_032170696.1;Parent=gene-AB25_RS17935;Dbxref=GenBank:WP_032170696.1;Name=WP_032170696.1;gbkey=CDS;gene=tonB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415768.1;locus_tag=AB25_RS17935;product=TonB system transport protein TonB;protein_id=WP_032170696.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 16625 17023 . - . ID=gene-AB25_RS17930;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;locus_tag=AB25_RS17930;old_locus_tag=AB25_1418 NZ_JJMC01000024.1 Protein Homology CDS 16625 17023 . - 0 ID=cds-WP_000108160.1;Parent=gene-AB25_RS17930;Dbxref=GenBank:WP_000108160.1;Name=WP_000108160.1;Ontology_term=GO:0016790;gbkey=CDS;gene=yciA;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415769.1;locus_tag=AB25_RS17930;product=acyl-CoA thioester hydrolase YciA;protein_id=WP_000108160.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 17128 17667 . - . ID=gene-AB25_RS17925;Name=yciB;gbkey=Gene;gene=yciB;gene_biotype=protein_coding;locus_tag=AB25_RS17925;old_locus_tag=AB25_1419 NZ_JJMC01000024.1 Protein Homology CDS 17128 17667 . - 0 ID=cds-WP_000808667.1;Parent=gene-AB25_RS17925;Dbxref=GenBank:WP_000808667.1;Name=WP_000808667.1;gbkey=CDS;gene=yciB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309781.1;locus_tag=AB25_RS17925;product=septation protein A;protein_id=WP_000808667.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 17697 18440 . - . ID=gene-AB25_RS17920;Name=yciC;gbkey=Gene;gene=yciC;gene_biotype=protein_coding;locus_tag=AB25_RS17920;old_locus_tag=AB25_1420 NZ_JJMC01000024.1 Protein Homology CDS 17697 18440 . - 0 ID=cds-WP_000028540.1;Parent=gene-AB25_RS17920;Dbxref=GenBank:WP_000028540.1;Name=WP_000028540.1;gbkey=CDS;gene=yciC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415771.1;locus_tag=AB25_RS17920;product=YciC family protein;protein_id=WP_000028540.1;transl_table=11 NZ_JJMC01000024.1 RefSeq pseudogene 18468 18557 . - . ID=gene-AB25_RS27995;Name=AB25_RS27995;end_range=18557,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS27995;partial=true;pseudo=true NZ_JJMC01000024.1 Protein Homology CDS 18468 18557 . - 0 ID=cds-AB25_RS27995;Parent=gene-AB25_RS27995;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=18557,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460692.1;locus_tag=AB25_RS27995;partial=true;product=YkgJ family cysteine cluster protein;pseudo=true;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 18797 19435 . + . ID=gene-AB25_RS17915;Name=ompW;gbkey=Gene;gene=ompW;gene_biotype=protein_coding;locus_tag=AB25_RS17915;old_locus_tag=AB25_1421 NZ_JJMC01000024.1 Protein Homology CDS 18797 19435 . + 0 ID=cds-WP_000737224.1;Parent=gene-AB25_RS17915;Dbxref=GenBank:WP_000737224.1;Name=WP_000737224.1;Ontology_term=GO:0019867;gbkey=CDS;gene=ompW;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309783.1;locus_tag=AB25_RS17915;product=outer membrane protein OmpW;protein_id=WP_000737224.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 19481 20611 . - . ID=gene-AB25_RS17910;Name=AB25_RS17910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS17910;old_locus_tag=AB25_1422 NZ_JJMC01000024.1 Protein Homology CDS 19481 20611 . - 0 ID=cds-WP_000113700.1;Parent=gene-AB25_RS17910;Dbxref=GenBank:WP_000113700.1;Name=WP_000113700.1;Ontology_term=GO:0015074,GO:0003677,GO:0008907;gbkey=CDS;go_function=DNA binding|0003677||IEA,integrase activity|0008907||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309784.1;locus_tag=AB25_RS17910;product=phage integrase Arm DNA-binding domain-containing protein;protein_id=WP_000113700.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 20589 20837 . - . ID=gene-AB25_RS0124955;Name=AB25_RS0124955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0124955 NZ_JJMC01000024.1 Protein Homology CDS 20589 20837 . - 0 ID=cds-WP_000113189.1;Parent=gene-AB25_RS0124955;Dbxref=GenBank:WP_000113189.1;Name=WP_000113189.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309785.1;locus_tag=AB25_RS0124955;product=excisionase;protein_id=WP_000113189.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 20902 23373 . - . ID=gene-AB25_RS17905;Name=AB25_RS17905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS17905;old_locus_tag=AB25_1423 NZ_JJMC01000024.1 Protein Homology CDS 20902 23373 . - 0 ID=cds-WP_032170682.1;Parent=gene-AB25_RS17905;Dbxref=GenBank:WP_032170682.1;Name=WP_032170682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309786.1;locus_tag=AB25_RS17905;product=exonuclease;protein_id=WP_032170682.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 23466 23657 . - . ID=gene-AB25_RS17900;Name=ydfD;gbkey=Gene;gene=ydfD;gene_biotype=protein_coding;locus_tag=AB25_RS17900;old_locus_tag=AB25_1424 NZ_JJMC01000024.1 Protein Homology CDS 23466 23657 . - 0 ID=cds-WP_001090200.1;Parent=gene-AB25_RS17900;Dbxref=GenBank:WP_001090200.1;Name=WP_001090200.1;gbkey=CDS;gene=ydfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309787.1;locus_tag=AB25_RS17900;product=DUF1482 family protein;protein_id=WP_001090200.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 23654 23842 . - . ID=gene-AB25_RS17895;Name=dicB;gbkey=Gene;gene=dicB;gene_biotype=protein_coding;locus_tag=AB25_RS17895;old_locus_tag=AB25_1425 NZ_JJMC01000024.1 Protein Homology CDS 23654 23842 . - 0 ID=cds-WP_000449192.1;Parent=gene-AB25_RS17895;Dbxref=GenBank:WP_000449192.1;Name=WP_000449192.1;gbkey=CDS;gene=dicB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309788.1;locus_tag=AB25_RS17895;product=cell division inhibition protein DicB;protein_id=WP_000449192.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 24133 25182 . + . ID=gene-AB25_RS17890;Name=AB25_RS17890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS17890;old_locus_tag=AB25_1427 NZ_JJMC01000024.1 Protein Homology CDS 24133 25182 . + 0 ID=cds-WP_032178064.1;Parent=gene-AB25_RS17890;Dbxref=GenBank:WP_032178064.1;Name=WP_032178064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001265086.1;locus_tag=AB25_RS17890;product=DUF968 domain-containing protein;protein_id=WP_032178064.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 25183 25563 . + . ID=gene-AB25_RS17885;Name=AB25_RS17885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS17885;old_locus_tag=AB25_1428 NZ_JJMC01000024.1 Protein Homology CDS 25183 25563 . + 0 ID=cds-WP_000140009.1;Parent=gene-AB25_RS17885;Dbxref=GenBank:WP_000140009.1;Name=WP_000140009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000140009.1;locus_tag=AB25_RS17885;product=RusA family crossover junction endodeoxyribonuclease;protein_id=WP_000140009.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 25560 26381 . + . ID=gene-AB25_RS17880;Name=AB25_RS17880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS17880;old_locus_tag=AB25_1429 NZ_JJMC01000024.1 Protein Homology CDS 25560 26381 . + 0 ID=cds-WP_032170684.1;Parent=gene-AB25_RS17880;Dbxref=GenBank:WP_032170684.1;Name=WP_032170684.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309551.1;locus_tag=AB25_RS17880;product=antitermination protein;protein_id=WP_032170684.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 26608 26805 . + . ID=gene-AB25_RS17875;Name=AB25_RS17875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS17875;old_locus_tag=AB25_1430 NZ_JJMC01000024.1 Protein Homology CDS 26608 26805 . + 0 ID=cds-WP_000917767.1;Parent=gene-AB25_RS17875;Dbxref=GenBank:WP_000917767.1;Name=WP_000917767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309806.2;locus_tag=AB25_RS17875;product=hypothetical protein;protein_id=WP_000917767.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 26956 28005 . + . ID=gene-AB25_RS17870;Name=AB25_RS17870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS17870;old_locus_tag=AB25_1431 NZ_JJMC01000024.1 Protein Homology CDS 26956 28005 . + 0 ID=cds-WP_032170685.1;Parent=gene-AB25_RS17870;Dbxref=GenBank:WP_032170685.1;Name=WP_032170685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575625.1;locus_tag=AB25_RS17870;product=DNA-methyltransferase;protein_id=WP_032170685.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 28055 28130 . + . ID=gene-AB25_RS17865;Name=AB25_RS17865;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS17865;old_locus_tag=AB25_1432 NZ_JJMC01000024.1 tRNAscan-SE tRNA 28055 28130 . + . ID=rna-AB25_RS17865;Parent=gene-AB25_RS17865;anticodon=(pos:28088..28090);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS17865;product=tRNA-Ile NZ_JJMC01000024.1 tRNAscan-SE exon 28055 28130 . + . ID=exon-AB25_RS17865-1;Parent=rna-AB25_RS17865;anticodon=(pos:28088..28090);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS17865;product=tRNA-Ile NZ_JJMC01000024.1 RefSeq gene 28231 28307 . + . ID=gene-AB25_RS17860;Name=AB25_RS17860;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS17860;old_locus_tag=AB25_1433 NZ_JJMC01000024.1 tRNAscan-SE tRNA 28231 28307 . + . ID=rna-AB25_RS17860;Parent=gene-AB25_RS17860;anticodon=(pos:28265..28267);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS17860;product=tRNA-Arg NZ_JJMC01000024.1 tRNAscan-SE exon 28231 28307 . + . ID=exon-AB25_RS17860-1;Parent=rna-AB25_RS17860;anticodon=(pos:28265..28267);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS17860;product=tRNA-Arg NZ_JJMC01000024.1 RefSeq gene 28807 28938 . + . ID=gene-AB25_RS31060;Name=AB25_RS31060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31060;old_locus_tag=AB25_1434 NZ_JJMC01000024.1 Protein Homology CDS 28807 28938 . + 0 ID=cds-WP_001438304.1;Parent=gene-AB25_RS31060;Dbxref=GenBank:WP_001438304.1;Name=WP_001438304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216624.1;locus_tag=AB25_RS31060;product=DUF3927 family protein;protein_id=WP_001438304.1;transl_table=11 NZ_JJMC01000024.1 RefSeq pseudogene 29023 29148 . - . ID=gene-AB25_RS32390;Name=AB25_RS32390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32390;partial=true;pseudo=true;start_range=.,29023 NZ_JJMC01000024.1 Protein Homology CDS 29023 29148 . - 0 ID=cds-AB25_RS32390;Parent=gene-AB25_RS32390;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311526.1;locus_tag=AB25_RS32390;partial=true;product=hypothetical protein;pseudo=true;start_range=.,29023;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 29219 29554 . - . ID=gene-AB25_RS17850;Name=AB25_RS17850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS17850;old_locus_tag=AB25_1435 NZ_JJMC01000024.1 Protein Homology CDS 29219 29554 . - 0 ID=cds-WP_000871291.1;Parent=gene-AB25_RS17850;Dbxref=GenBank:WP_000871291.1;Name=WP_000871291.1;Ontology_term=GO:0043856,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=anti-sigma factor antagonist activity|0043856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707425.1;locus_tag=AB25_RS17850;product=anti-adapter protein IraM;protein_id=WP_000871291.1;transl_table=11 NZ_JJMC01000024.1 RefSeq pseudogene 29815 30582 . + . ID=gene-AB25_RS17845;Name=AB25_RS17845;end_range=30582,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS17845;old_locus_tag=AB25_1437;partial=true;pseudo=true NZ_JJMC01000024.1 Protein Homology CDS 29815 30582 . + 0 ID=cds-AB25_RS17845;Parent=gene-AB25_RS17845;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=30582,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310289.1;locus_tag=AB25_RS17845;partial=true;product=DUF1737 domain-containing protein;pseudo=true;transl_table=11 NZ_JJMC01000024.1 RefSeq pseudogene 30576 31982 . + . ID=gene-AB25_RS17840;Name=AB25_RS17840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS17840;old_locus_tag=AB25_1438;partial=true;pseudo=true;start_range=.,30576 NZ_JJMC01000024.1 Protein Homology CDS 30576 31982 . + 0 ID=cds-AB25_RS17840;Parent=gene-AB25_RS17840;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216471.1;locus_tag=AB25_RS17840;partial=true;product=phage tail protein;pseudo=true;start_range=.,30576;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 31982 32566 . + . ID=gene-AB25_RS17835;Name=AB25_RS17835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS17835;old_locus_tag=AB25_1439 NZ_JJMC01000024.1 Protein Homology CDS 31982 32566 . + 0 ID=cds-WP_000885578.1;Parent=gene-AB25_RS17835;Dbxref=GenBank:WP_000885578.1;Name=WP_000885578.1;Ontology_term=GO:0098004;gbkey=CDS;go_process=virus tail fiber assembly|0098004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000885581.1;locus_tag=AB25_RS17835;product=tail fiber assembly protein;protein_id=WP_000885578.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 32621 33289 . - . ID=gene-AB25_RS0124965;Name=AB25_RS0124965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0124965 NZ_JJMC01000024.1 Protein Homology CDS 32621 33289 . - 0 ID=cds-WP_000240999.1;Parent=gene-AB25_RS0124965;Dbxref=GenBank:WP_000240999.1;Name=WP_000240999.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707858.1;locus_tag=AB25_RS0124965;product=class I SAM-dependent methyltransferase;protein_id=WP_000240999.1;transl_table=11 NZ_JJMC01000024.1 RefSeq pseudogene 33439 33615 . + . ID=gene-AB25_RS32395;Name=AB25_RS32395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32395;old_locus_tag=AB25_1440;partial=true;pseudo=true;start_range=.,33439 NZ_JJMC01000024.1 Protein Homology CDS 33439 33615 . + 0 ID=cds-AB25_RS32395;Parent=gene-AB25_RS32395;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415891.1;locus_tag=AB25_RS32395;partial=true;product=tail fiber assembly protein;pseudo=true;start_range=.,33439;transl_table=11 NZ_JJMC01000024.1 RefSeq pseudogene 33712 33981 . + . ID=gene-AB25_RS32935;Name=AB25_RS32935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32935;partial=true;pseudo=true;start_range=.,33712 NZ_JJMC01000024.1 Protein Homology CDS 33712 33981 . + 0 ID=cds-AB25_RS32935;Parent=gene-AB25_RS32935;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000701868.1;locus_tag=AB25_RS32935;partial=true;product=DUF4376 domain-containing protein;pseudo=true;start_range=.,33712;transl_table=11 NZ_JJMC01000024.1 RefSeq pseudogene 34204 34329 . + . ID=gene-AB25_RS28010;Name=AB25_RS28010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS28010;old_locus_tag=AB25_1442;partial=true;pseudo=true;start_range=.,34204 NZ_JJMC01000024.1 Protein Homology CDS 34204 34329 . + 0 ID=cds-AB25_RS28010;Parent=gene-AB25_RS28010;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415772.1;locus_tag=AB25_RS28010;partial=true;product=OmpW family outer membrane protein;pseudo=true;start_range=.,34204;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 34389 34895 . - . ID=gene-AB25_RS17820;Name=yciE;gbkey=Gene;gene=yciE;gene_biotype=protein_coding;locus_tag=AB25_RS17820;old_locus_tag=AB25_1443 NZ_JJMC01000024.1 Protein Homology CDS 34389 34895 . - 0 ID=cds-WP_001079504.1;Parent=gene-AB25_RS17820;Dbxref=GenBank:WP_001079504.1;Name=WP_001079504.1;Ontology_term=GO:0046872;gbkey=CDS;gene=yciE;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309856.1;locus_tag=AB25_RS17820;product=ferritin-like domain-containing protein;protein_id=WP_001079504.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 34941 35441 . - . ID=gene-AB25_RS17815;Name=yciF;gbkey=Gene;gene=yciF;gene_biotype=protein_coding;locus_tag=AB25_RS17815;old_locus_tag=AB25_1444 NZ_JJMC01000024.1 Protein Homology CDS 34941 35441 . - 0 ID=cds-WP_001056491.1;Parent=gene-AB25_RS17815;Dbxref=GenBank:WP_001056491.1;Name=WP_001056491.1;Ontology_term=GO:0046872;gbkey=CDS;gene=yciF;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309857.1;locus_tag=AB25_RS17815;product=ferritin-like domain-containing protein;protein_id=WP_001056491.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 35527 35706 . - . ID=gene-AB25_RS17810;Name=yciG;gbkey=Gene;gene=yciG;gene_biotype=protein_coding;locus_tag=AB25_RS17810;old_locus_tag=AB25_1445 NZ_JJMC01000024.1 Protein Homology CDS 35527 35706 . - 0 ID=cds-WP_000807651.1;Parent=gene-AB25_RS17810;Dbxref=GenBank:WP_000807651.1;Name=WP_000807651.1;Ontology_term=GO:0006950;gbkey=CDS;gene=yciG;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309858.2;locus_tag=AB25_RS17810;product=general stress protein;protein_id=WP_000807651.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 36087 36893 . - . ID=gene-AB25_RS17805;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=AB25_RS17805;old_locus_tag=AB25_1446 NZ_JJMC01000024.1 Protein Homology CDS 36087 36893 . - 0 ID=cds-WP_000443056.1;Parent=gene-AB25_RS17805;Dbxref=GenBank:WP_000443056.1;Name=WP_000443056.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415776.1;locus_tag=AB25_RS17805;product=tryptophan synthase subunit alpha;protein_id=WP_000443056.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 36893 38086 . - . ID=gene-AB25_RS17800;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=AB25_RS17800;old_locus_tag=AB25_1447 NZ_JJMC01000024.1 Protein Homology CDS 36893 38086 . - 0 ID=cds-WP_000209520.1;Parent=gene-AB25_RS17800;Dbxref=GenBank:WP_000209520.1;Name=WP_000209520.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415777.1;locus_tag=AB25_RS17800;product=tryptophan synthase subunit beta;protein_id=WP_000209520.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 38098 39459 . - . ID=gene-AB25_RS17795;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;locus_tag=AB25_RS17795;old_locus_tag=AB25_1448 NZ_JJMC01000024.1 Protein Homology CDS 38098 39459 . - 0 ID=cds-WP_074413563.1;Parent=gene-AB25_RS17795;Dbxref=GenBank:WP_074413563.1;Name=WP_074413563.1;Ontology_term=GO:0006568,GO:0004425,GO:0004640;gbkey=CDS;gene=trpCF;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707171.1;locus_tag=AB25_RS17795;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=WP_074413563.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 39460 41055 . - . ID=gene-AB25_RS17790;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=AB25_RS17790;old_locus_tag=AB25_1449 NZ_JJMC01000024.1 Protein Homology CDS 39460 41055 . - 0 ID=cds-WP_000763511.1;Parent=gene-AB25_RS17790;Dbxref=GenBank:WP_000763511.1;Name=WP_000763511.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784940.1;locus_tag=AB25_RS17790;product=bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD;protein_id=WP_000763511.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 41055 42617 . - . ID=gene-AB25_RS17785;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=AB25_RS17785;old_locus_tag=AB25_1450 NZ_JJMC01000024.1 Protein Homology CDS 41055 42617 . - 0 ID=cds-WP_001194590.1;Parent=gene-AB25_RS17785;Dbxref=GenBank:WP_001194590.1;Name=WP_001194590.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415780.1;locus_tag=AB25_RS17785;product=anthranilate synthase component I;protein_id=WP_001194590.1;transl_table=11 NZ_JJMC01000024.1 cmsearch sequence_feature 42638 42731 . - . ID=id-NZ_JJMC01000024.1:42638..42731;Dbxref=RFAM:RF00513;Note=Trp leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JJMC01000024.1 RefSeq gene 42708 42752 . - . ID=gene-AB25_RS28015;Name=trpL;gbkey=Gene;gene=trpL;gene_biotype=protein_coding;locus_tag=AB25_RS28015 NZ_JJMC01000024.1 Protein Homology CDS 42708 42752 . - 0 ID=cds-WP_001700591.1;Parent=gene-AB25_RS28015;Dbxref=GenBank:WP_001700591.1;Name=WP_001700591.1;gbkey=CDS;gene=trpL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309864.1;locus_tag=AB25_RS28015;product=trp operon leader peptide;protein_id=WP_001700591.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 42890 43771 . + . ID=gene-AB25_RS17780;Name=rnm;gbkey=Gene;gene=rnm;gene_biotype=protein_coding;gene_synonym=trpH,yciV;locus_tag=AB25_RS17780;old_locus_tag=AB25_1451 NZ_JJMC01000024.1 Protein Homology CDS 42890 43771 . + 0 ID=cds-WP_001285661.1;Parent=gene-AB25_RS17780;Dbxref=GenBank:WP_001285661.1;Name=WP_001285661.1;Ontology_term=GO:0006364,GO:0004534,GO:0035312,GO:0097657;gbkey=CDS;gene=rnm;go_function=5'-3' RNA exonuclease activity|0004534||IEA,5'-3' DNA exonuclease activity|0035312||IEA,3'%2C5'-nucleotide bisphosphate phosphatase activity|0097657||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415782.1;locus_tag=AB25_RS17780;product=RNase RNM;protein_id=WP_001285661.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 43768 44388 . + . ID=gene-AB25_RS17775;Name=yciO;gbkey=Gene;gene=yciO;gene_biotype=protein_coding;locus_tag=AB25_RS17775;old_locus_tag=AB25_1452 NZ_JJMC01000024.1 Protein Homology CDS 43768 44388 . + 0 ID=cds-WP_001295575.1;Parent=gene-AB25_RS17775;Dbxref=GenBank:WP_001295575.1;Name=WP_001295575.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;gene=yciO;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126434.1;locus_tag=AB25_RS17775;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_001295575.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 44489 45361 . + . ID=gene-AB25_RS17770;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=AB25_RS17770;old_locus_tag=AB25_1453 NZ_JJMC01000024.1 Protein Homology CDS 44489 45361 . + 0 ID=cds-WP_001291216.1;Parent=gene-AB25_RS17770;Dbxref=GenBank:WP_001291216.1;Name=WP_001291216.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309868.1;locus_tag=AB25_RS17770;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WP_001291216.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 45401 45991 . - . ID=gene-AB25_RS17765;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=AB25_RS17765;old_locus_tag=AB25_1454 NZ_JJMC01000024.1 Protein Homology CDS 45401 45991 . - 0 ID=cds-WP_001278904.1;Parent=gene-AB25_RS17765;Dbxref=GenBank:WP_001278904.1;Name=WP_001278904.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415786.1;locus_tag=AB25_RS17765;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_001278904.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 45988 46746 . - . ID=gene-AB25_RS17760;Name=yciK;gbkey=Gene;gene=yciK;gene_biotype=protein_coding;locus_tag=AB25_RS17760;old_locus_tag=AB25_1455 NZ_JJMC01000024.1 Protein Homology CDS 45988 46746 . - 0 ID=cds-WP_000559280.1;Parent=gene-AB25_RS17760;Dbxref=GenBank:WP_000559280.1;Name=WP_000559280.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yciK;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309870.1;locus_tag=AB25_RS17760;product=YciK family oxidoreductase;protein_id=WP_000559280.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 46966 48015 . + . ID=gene-AB25_RS17755;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=AB25_RS17755;old_locus_tag=AB25_1456 NZ_JJMC01000024.1 Protein Homology CDS 46966 48015 . + 0 ID=cds-WP_032170686.1;Parent=gene-AB25_RS17755;Dbxref=GenBank:WP_032170686.1;Name=WP_032170686.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415788.1;locus_tag=AB25_RS17755;product=protease SohB;protein_id=WP_032170686.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 48051 48302 . - . ID=gene-AB25_RS17750;Name=yciN;gbkey=Gene;gene=yciN;gene_biotype=protein_coding;locus_tag=AB25_RS17750;old_locus_tag=AB25_1457 NZ_JJMC01000024.1 Protein Homology CDS 48051 48302 . - 0 ID=cds-WP_001031530.1;Parent=gene-AB25_RS17750;Dbxref=GenBank:WP_001031530.1;Name=WP_001031530.1;gbkey=CDS;gene=yciN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309872.1;locus_tag=AB25_RS17750;product=YciN family protein;protein_id=WP_001031530.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 48682 51279 . + . ID=gene-AB25_RS17745;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=AB25_RS17745;old_locus_tag=AB25_1459 NZ_JJMC01000024.1 Protein Homology CDS 48682 51279 . + 0 ID=cds-WP_001297122.1;Parent=gene-AB25_RS17745;Dbxref=GenBank:WP_001297122.1;Name=WP_001297122.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513601.1;locus_tag=AB25_RS17745;product=type I DNA topoisomerase;protein_id=WP_001297122.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 51489 52463 . + . ID=gene-AB25_RS17740;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=AB25_RS17740;old_locus_tag=AB25_1460 NZ_JJMC01000024.1 Protein Homology CDS 51489 52463 . + 0 ID=cds-WP_000776253.1;Parent=gene-AB25_RS17740;Dbxref=GenBank:WP_000776253.1;Name=WP_000776253.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cysB;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017585.1;locus_tag=AB25_RS17740;product=HTH-type transcriptional regulator CysB;protein_id=WP_000776253.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 52782 52922 . + . ID=gene-AB25_RS17735;Name=ymiA;gbkey=Gene;gene=ymiA;gene_biotype=protein_coding;locus_tag=AB25_RS17735;old_locus_tag=AB25_1461 NZ_JJMC01000024.1 Protein Homology CDS 52782 52922 . + 0 ID=cds-WP_001300896.1;Parent=gene-AB25_RS17735;Dbxref=GenBank:WP_001300896.1;Name=WP_001300896.1;gbkey=CDS;gene=ymiA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588449.3;locus_tag=AB25_RS17735;product=YmiA family putative membrane protein;protein_id=WP_001300896.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 52925 53092 . + . ID=gene-AB25_RS17730;Name=yciX;gbkey=Gene;gene=yciX;gene_biotype=protein_coding;locus_tag=AB25_RS17730;old_locus_tag=AB25_1462 NZ_JJMC01000024.1 Protein Homology CDS 52925 53092 . + 0 ID=cds-WP_001297116.1;Parent=gene-AB25_RS17730;Dbxref=GenBank:WP_001297116.1;Name=WP_001297116.1;gbkey=CDS;gene=yciX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588450.2;locus_tag=AB25_RS17730;product=protein YciX;protein_id=WP_001297116.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 53206 53301 . + . ID=gene-AB25_RS31670;Name=ymiC;gbkey=Gene;gene=ymiC;gene_biotype=protein_coding;locus_tag=AB25_RS31670 NZ_JJMC01000024.1 Protein Homology CDS 53206 53301 . + 0 ID=cds-WP_001310756.1;Parent=gene-AB25_RS31670;Dbxref=GenBank:WP_001310756.1;Name=WP_001310756.1;gbkey=CDS;gene=ymiC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518771.1;locus_tag=AB25_RS31670;product=small membrane protein YmiC;protein_id=WP_001310756.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 53465 56140 . + . ID=gene-AB25_RS17725;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=AB25_RS17725;old_locus_tag=AB25_1463 NZ_JJMC01000024.1 Protein Homology CDS 53465 56140 . + 0 ID=cds-WP_000099521.1;Parent=gene-AB25_RS17725;Dbxref=GenBank:WP_000099521.1;Name=WP_000099521.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415792.1;locus_tag=AB25_RS17725;product=aconitate hydratase AcnA;protein_id=WP_000099521.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 56204 56794 . - . ID=gene-AB25_RS17720;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=AB25_RS17720;old_locus_tag=AB25_1464 NZ_JJMC01000024.1 Protein Homology CDS 56204 56794 . - 0 ID=cds-WP_001176295.1;Parent=gene-AB25_RS17720;Dbxref=GenBank:WP_001176295.1;Name=WP_001176295.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309877.1;locus_tag=AB25_RS17720;product=GTP cyclohydrolase II;protein_id=WP_001176295.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 56964 57728 . + . ID=gene-AB25_RS17715;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=AB25_RS17715;old_locus_tag=AB25_1465 NZ_JJMC01000024.1 Protein Homology CDS 56964 57728 . + 0 ID=cds-WP_001256538.1;Parent=gene-AB25_RS17715;Dbxref=GenBank:WP_001256538.1;Name=WP_001256538.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=pgpB;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309878.1;locus_tag=AB25_RS17715;product=phosphatidylglycerophosphatase B;protein_id=WP_001256538.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 57877 58185 . + . ID=gene-AB25_RS17710;Name=lapA;gbkey=Gene;gene=lapA;gene_biotype=protein_coding;locus_tag=AB25_RS17710;old_locus_tag=AB25_1466 NZ_JJMC01000024.1 Protein Homology CDS 57877 58185 . + 0 ID=cds-WP_000876286.1;Parent=gene-AB25_RS17710;Dbxref=GenBank:WP_000876286.1;Name=WP_000876286.1;gbkey=CDS;gene=lapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415795.1;locus_tag=AB25_RS17710;product=lipopolysaccharide assembly protein LapA;protein_id=WP_000876286.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 58192 59361 . + . ID=gene-AB25_RS17705;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=AB25_RS17705;old_locus_tag=AB25_1467 NZ_JJMC01000024.1 Protein Homology CDS 58192 59361 . + 0 ID=cds-WP_000891353.1;Parent=gene-AB25_RS17705;Dbxref=GenBank:WP_000891353.1;Name=WP_000891353.1;Ontology_term=GO:0008653,GO:0005515;gbkey=CDS;gene=lapB;go_function=protein binding|0005515||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309880.1;locus_tag=AB25_RS17705;product=lipopolysaccharide assembly protein LapB;protein_id=WP_000891353.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 59554 60291 . + . ID=gene-AB25_RS17700;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=AB25_RS17700;old_locus_tag=AB25_1469 NZ_JJMC01000024.1 Protein Homology CDS 59554 60291 . + 0 ID=cds-WP_000176278.1;Parent=gene-AB25_RS17700;Dbxref=GenBank:WP_000176278.1;Name=WP_000176278.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415797.1;locus_tag=AB25_RS17700;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_000176278.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 60291 60617 . + . ID=gene-AB25_RS17695;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=AB25_RS17695;old_locus_tag=AB25_1470 NZ_JJMC01000024.1 Protein Homology CDS 60291 60617 . + 0 ID=cds-WP_001295580.1;Parent=gene-AB25_RS17695;Dbxref=GenBank:WP_001295580.1;Name=WP_001295580.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415798.2;locus_tag=AB25_RS17695;product=stress response translation initiation inhibitor YciH;protein_id=WP_001295580.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 60743 60961 . - . ID=gene-AB25_RS17690;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=protein_coding;locus_tag=AB25_RS17690;old_locus_tag=AB25_1471 NZ_JJMC01000024.1 Protein Homology CDS 60743 60961 . - 0 ID=cds-WP_000498253.1;Parent=gene-AB25_RS17690;Dbxref=GenBank:WP_000498253.1;Name=WP_000498253.1;gbkey=CDS;gene=osmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309883.1;locus_tag=AB25_RS17690;product=osmotically-inducible lipoprotein OsmB;protein_id=WP_000498253.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 61230 61979 . - . ID=gene-AB25_RS17685;Name=yciT;gbkey=Gene;gene=yciT;gene_biotype=protein_coding;locus_tag=AB25_RS17685;old_locus_tag=AB25_1472 NZ_JJMC01000024.1 Protein Homology CDS 61230 61979 . - 0 ID=cds-WP_001088621.1;Parent=gene-AB25_RS17685;Dbxref=GenBank:WP_001088621.1;Name=WP_001088621.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yciT;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309884.1;locus_tag=AB25_RS17685;product=DNA-binding transcriptional regulator YciT;protein_id=WP_001088621.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 62069 62242 . - . ID=gene-AB25_RS17680;Name=yciZ;gbkey=Gene;gene=yciZ;gene_biotype=protein_coding;locus_tag=AB25_RS17680;old_locus_tag=AB25_1473 NZ_JJMC01000024.1 Protein Homology CDS 62069 62242 . - 0 ID=cds-WP_001288368.1;Parent=gene-AB25_RS17680;Dbxref=GenBank:WP_001288368.1;Name=WP_001288368.1;gbkey=CDS;gene=yciZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165317.1;locus_tag=AB25_RS17680;product=YciZ family protein;protein_id=WP_001288368.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 62279 62407 . + . ID=gene-AB25_RS32240;Name=ymiD;gbkey=Gene;gene=ymiD;gene_biotype=protein_coding;locus_tag=AB25_RS32240 NZ_JJMC01000024.1 Protein Homology CDS 62279 62407 . + 0 ID=cds-WP_211180493.1;Parent=gene-AB25_RS32240;Dbxref=GenBank:WP_211180493.1;Name=WP_211180493.1;gbkey=CDS;gene=ymiD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051182.1;locus_tag=AB25_RS32240;product=protein YmiD;protein_id=WP_211180493.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 62389 64374 . - . ID=gene-AB25_RS17675;Name=pdeR;gbkey=Gene;gene=pdeR;gene_biotype=protein_coding;locus_tag=AB25_RS17675;old_locus_tag=AB25_1474 NZ_JJMC01000024.1 Protein Homology CDS 62389 64374 . - 0 ID=cds-WP_032170687.1;Parent=gene-AB25_RS17675;Dbxref=GenBank:WP_032170687.1;Name=WP_032170687.1;gbkey=CDS;gene=pdeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415801.1;locus_tag=AB25_RS17675;product=cyclic di-GMP phosphodiesterase;protein_id=WP_032170687.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 64428 64532 . + . ID=gene-AB25_RS30195;Name=AB25_RS30195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS30195 NZ_JJMC01000024.1 Protein Homology CDS 64428 64532 . + 0 ID=cds-WP_000221855.1;Parent=gene-AB25_RS30195;Dbxref=GenBank:WP_000221855.1;Name=WP_000221855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791239.1;locus_tag=AB25_RS30195;product=hypothetical protein;protein_id=WP_000221855.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 64610 66544 . - . ID=gene-AB25_RS17670;Name=rnb;gbkey=Gene;gene=rnb;gene_biotype=protein_coding;locus_tag=AB25_RS17670;old_locus_tag=AB25_1475 NZ_JJMC01000024.1 Protein Homology CDS 64610 66544 . - 0 ID=cds-WP_000484984.1;Parent=gene-AB25_RS17670;Dbxref=GenBank:WP_000484984.1;Name=WP_000484984.1;Ontology_term=GO:0006401,GO:0003723,GO:0008859;gbkey=CDS;gene=rnb;go_function=RNA binding|0003723||IEA,exoribonuclease II activity|0008859||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415802.1;locus_tag=AB25_RS17670;product=exoribonuclease II;protein_id=WP_000484984.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 66612 67739 . - . ID=gene-AB25_RS17665;Name=yciW;gbkey=Gene;gene=yciW;gene_biotype=protein_coding;locus_tag=AB25_RS17665;old_locus_tag=AB25_1476 NZ_JJMC01000024.1 Protein Homology CDS 66612 67739 . - 0 ID=cds-WP_001356195.1;Parent=gene-AB25_RS17665;Dbxref=GenBank:WP_001356195.1;Name=WP_001356195.1;gbkey=CDS;gene=yciW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309887.2;locus_tag=AB25_RS17665;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_001356195.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 67884 68672 . - . ID=gene-AB25_RS17660;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=AB25_RS17660;old_locus_tag=AB25_1477 NZ_JJMC01000024.1 Protein Homology CDS 67884 68672 . - 0 ID=cds-WP_000506490.1;Parent=gene-AB25_RS17660;Dbxref=GenBank:WP_000506490.1;Name=WP_000506490.1;gbkey=CDS;gene=fabI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126472.1;locus_tag=AB25_RS17660;product=enoyl-ACP reductase FabI;protein_id=WP_000506490.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 69040 69393 . - . ID=gene-AB25_RS17655;Name=ycjD;gbkey=Gene;gene=ycjD;gene_biotype=protein_coding;locus_tag=AB25_RS17655;old_locus_tag=AB25_1478 NZ_JJMC01000024.1 Protein Homology CDS 69040 69393 . - 0 ID=cds-WP_000968837.1;Parent=gene-AB25_RS17655;Dbxref=GenBank:WP_000968837.1;Name=WP_000968837.1;gbkey=CDS;gene=ycjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707198.1;locus_tag=AB25_RS17655;product=DUF559 domain-containing protein;protein_id=WP_000968837.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 69461 70267 . - . ID=gene-AB25_RS17650;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=AB25_RS17650;old_locus_tag=AB25_1479 NZ_JJMC01000024.1 Protein Homology CDS 69461 70267 . - 0 ID=cds-WP_000573412.1;Parent=gene-AB25_RS17650;Dbxref=GenBank:WP_000573412.1;Name=WP_000573412.1;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309894.1;locus_tag=AB25_RS17650;product=peptide ABC transporter ATP-binding protein SapF;protein_id=WP_000573412.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 70269 71261 . - . ID=gene-AB25_RS17645;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=AB25_RS17645;old_locus_tag=AB25_1480 NZ_JJMC01000024.1 Protein Homology CDS 70269 71261 . - 0 ID=cds-WP_001128858.1;Parent=gene-AB25_RS17645;Dbxref=GenBank:WP_001128858.1;Name=WP_001128858.1;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309895.1;locus_tag=AB25_RS17645;product=peptide ABC transporter ATP-binding protein SapD;protein_id=WP_001128858.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 71261 72151 . - . ID=gene-AB25_RS17640;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=AB25_RS17640;old_locus_tag=AB25_1481 NZ_JJMC01000024.1 Protein Homology CDS 71261 72151 . - 0 ID=cds-WP_001146163.1;Parent=gene-AB25_RS17640;Dbxref=GenBank:WP_001146163.1;Name=WP_001146163.1;gbkey=CDS;gene=sapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415808.1;locus_tag=AB25_RS17640;product=peptide ABC transporter permease SapC;protein_id=WP_001146163.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 72138 73103 . - . ID=gene-AB25_RS17635;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=AB25_RS17635;old_locus_tag=AB25_1482 NZ_JJMC01000024.1 Protein Homology CDS 72138 73103 . - 0 ID=cds-WP_000583277.1;Parent=gene-AB25_RS17635;Dbxref=GenBank:WP_000583277.1;Name=WP_000583277.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=sapB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126482.1;locus_tag=AB25_RS17635;product=putrescine export ABC transporter permease SapB;protein_id=WP_000583277.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 73100 74743 . - . ID=gene-AB25_RS17630;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=AB25_RS17630;old_locus_tag=AB25_1483 NZ_JJMC01000024.1 Protein Homology CDS 73100 74743 . - 0 ID=cds-WP_001250208.1;Parent=gene-AB25_RS17630;Dbxref=GenBank:WP_001250208.1;Name=WP_001250208.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=sapA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415810.1;locus_tag=AB25_RS17630;product=ABC transporter substrate-binding protein SapA;protein_id=WP_001250208.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 75056 75301 . - . ID=gene-AB25_RS17625;Name=ymjA;gbkey=Gene;gene=ymjA;gene_biotype=protein_coding;locus_tag=AB25_RS17625;old_locus_tag=AB25_1484 NZ_JJMC01000024.1 Protein Homology CDS 75056 75301 . - 0 ID=cds-WP_001015110.1;Parent=gene-AB25_RS17625;Dbxref=GenBank:WP_001015110.1;Name=WP_001015110.1;gbkey=CDS;gene=ymjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415811.1;locus_tag=AB25_RS17625;product=YmjA family protein;protein_id=WP_001015110.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 75435 76820 . - . ID=gene-AB25_RS17620;Name=puuP;gbkey=Gene;gene=puuP;gene_biotype=protein_coding;locus_tag=AB25_RS17620;old_locus_tag=AB25_1485 NZ_JJMC01000024.1 Protein Homology CDS 75435 76820 . - 0 ID=cds-WP_000996858.1;Parent=gene-AB25_RS17620;Dbxref=GenBank:WP_000996858.1;Name=WP_000996858.1;gbkey=CDS;gene=puuP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707205.2;locus_tag=AB25_RS17620;product=putrescine/proton symporter PuuP;protein_id=WP_000996858.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 76810 76974 . - . ID=gene-AB25_RS31675;Name=AB25_RS31675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31675 NZ_JJMC01000024.1 Protein Homology CDS 76810 76974 . - 0 ID=cds-WP_120795382.1;Parent=gene-AB25_RS31675;Dbxref=GenBank:WP_120795382.1;Name=WP_120795382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518772.1;locus_tag=AB25_RS31675;product=protein YmjE;protein_id=WP_120795382.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 77123 78541 . - . ID=gene-AB25_RS17615;Name=puuA;gbkey=Gene;gene=puuA;gene_biotype=protein_coding;locus_tag=AB25_RS17615;old_locus_tag=AB25_1486 NZ_JJMC01000024.1 Protein Homology CDS 77123 78541 . - 0 ID=cds-WP_001296746.1;Parent=gene-AB25_RS17615;Dbxref=GenBank:WP_001296746.1;Name=WP_001296746.1;gbkey=CDS;gene=puuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415813.4;locus_tag=AB25_RS17615;product=glutamate-putrescine ligase;protein_id=WP_001296746.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 78753 79517 . + . ID=gene-AB25_RS17610;Name=puuD;gbkey=Gene;gene=puuD;gene_biotype=protein_coding;locus_tag=AB25_RS17610;old_locus_tag=AB25_1487 NZ_JJMC01000024.1 Protein Homology CDS 78753 79517 . + 0 ID=cds-WP_001307158.1;Parent=gene-AB25_RS17610;Dbxref=GenBank:WP_001307158.1;Name=WP_001307158.1;Ontology_term=GO:0016787;gbkey=CDS;gene=puuD;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415814.4;locus_tag=AB25_RS17610;product=gamma-glutamyl-gamma-aminobutyrate hydrolase;protein_id=WP_001307158.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 79544 80101 . + . ID=gene-AB25_RS17605;Name=puuR;gbkey=Gene;gene=puuR;gene_biotype=protein_coding;locus_tag=AB25_RS17605;old_locus_tag=AB25_1488 NZ_JJMC01000024.1 Protein Homology CDS 79544 80101 . + 0 ID=cds-WP_001278727.1;Parent=gene-AB25_RS17605;Dbxref=GenBank:WP_001278727.1;Name=WP_001278727.1;gbkey=CDS;gene=puuR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001464354.1;locus_tag=AB25_RS17605;product=HTH-type transcriptional regulator PuuR;protein_id=WP_001278727.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 80251 81738 . + . ID=gene-AB25_RS17600;Name=puuC;gbkey=Gene;gene=puuC;gene_biotype=protein_coding;locus_tag=AB25_RS17600;old_locus_tag=AB25_1490 NZ_JJMC01000024.1 Protein Homology CDS 80251 81738 . + 0 ID=cds-WP_001009139.1;Parent=gene-AB25_RS17600;Dbxref=GenBank:WP_001009139.1;Name=WP_001009139.1;Ontology_term=GO:0016620;gbkey=CDS;gene=puuC;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415816.1;locus_tag=AB25_RS17600;product=aldehyde dehydrogenase PuuC;protein_id=WP_001009139.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 81740 83020 . + . ID=gene-AB25_RS17595;Name=puuB;gbkey=Gene;gene=puuB;gene_biotype=protein_coding;locus_tag=AB25_RS17595;old_locus_tag=AB25_1491 NZ_JJMC01000024.1 Protein Homology CDS 81740 83020 . + 0 ID=cds-WP_032295921.1;Parent=gene-AB25_RS17595;Dbxref=GenBank:WP_032295921.1;Name=WP_032295921.1;gbkey=CDS;gene=puuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415817.1;locus_tag=AB25_RS17595;product=gamma-glutamylputrescine oxidase;protein_id=WP_032295921.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 83058 84323 . + . ID=gene-AB25_RS17590;Name=puuE;gbkey=Gene;gene=puuE;gene_biotype=protein_coding;locus_tag=AB25_RS17590;old_locus_tag=AB25_1492 NZ_JJMC01000024.1 Protein Homology CDS 83058 84323 . + 0 ID=cds-WP_000069231.1;Parent=gene-AB25_RS17590;Dbxref=GenBank:WP_000069231.1;Name=WP_000069231.1;Ontology_term=GO:0009448;gbkey=CDS;gene=puuE;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309906.1;locus_tag=AB25_RS17590;product=4-aminobutyrate transaminase;protein_id=WP_000069231.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 84454 85431 . - . ID=gene-AB25_RS17585;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=AB25_RS17585;old_locus_tag=AB25_1493 NZ_JJMC01000024.1 Protein Homology CDS 84454 85431 . - 0 ID=cds-WP_001324045.1;Parent=gene-AB25_RS17585;Dbxref=GenBank:WP_001324045.1;Name=WP_001324045.1;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309907.2;locus_tag=AB25_RS17585;product=phage shock protein operon transcriptional activator;protein_id=WP_001324045.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 85598 86266 . + . ID=gene-AB25_RS17580;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=AB25_RS17580;old_locus_tag=AB25_1494 NZ_JJMC01000024.1 Protein Homology CDS 85598 86266 . + 0 ID=cds-WP_000511018.1;Parent=gene-AB25_RS17580;Dbxref=GenBank:WP_000511018.1;Name=WP_000511018.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309908.1;locus_tag=AB25_RS17580;product=phage shock protein PspA;protein_id=WP_000511018.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 86320 86544 . + . ID=gene-AB25_RS17575;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=AB25_RS17575;old_locus_tag=AB25_1495 NZ_JJMC01000024.1 Protein Homology CDS 86320 86544 . + 0 ID=cds-WP_001274963.1;Parent=gene-AB25_RS17575;Dbxref=GenBank:WP_001274963.1;Name=WP_001274963.1;Ontology_term=GO:0009271;gbkey=CDS;gene=pspB;go_process=phage shock|0009271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309909.1;locus_tag=AB25_RS17575;product=envelope stress response membrane protein PspB;protein_id=WP_001274963.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 86544 86903 . + . ID=gene-AB25_RS17570;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=protein_coding;locus_tag=AB25_RS17570;old_locus_tag=AB25_1496 NZ_JJMC01000024.1 Protein Homology CDS 86544 86903 . + 0 ID=cds-WP_000907387.1;Parent=gene-AB25_RS17570;Dbxref=GenBank:WP_000907387.1;Name=WP_000907387.1;gbkey=CDS;gene=pspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309910.1;locus_tag=AB25_RS17570;product=envelope stress response membrane protein PspC;protein_id=WP_000907387.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 86912 87133 . + . ID=gene-AB25_RS17565;Name=pspD;gbkey=Gene;gene=pspD;gene_biotype=protein_coding;locus_tag=AB25_RS17565;old_locus_tag=AB25_1497 NZ_JJMC01000024.1 Protein Homology CDS 86912 87133 . + 0 ID=cds-WP_001295585.1;Parent=gene-AB25_RS17565;Dbxref=GenBank:WP_001295585.1;Name=WP_001295585.1;gbkey=CDS;gene=pspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309911.1;locus_tag=AB25_RS17565;product=phage shock protein PspD;protein_id=WP_001295585.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 87208 87522 . + . ID=gene-AB25_RS17560;Name=pspE;gbkey=Gene;gene=pspE;gene_biotype=protein_coding;locus_tag=AB25_RS17560;old_locus_tag=AB25_1498 NZ_JJMC01000024.1 Protein Homology CDS 87208 87522 . + 0 ID=cds-WP_000473109.1;Parent=gene-AB25_RS17560;Dbxref=GenBank:WP_000473109.1;Name=WP_000473109.1;gbkey=CDS;gene=pspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415824.1;locus_tag=AB25_RS17560;product=thiosulfate sulfurtransferase PspE;protein_id=WP_000473109.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 87735 89414 . + . ID=gene-AB25_RS17555;Name=ycjM;gbkey=Gene;gene=ycjM;gene_biotype=protein_coding;locus_tag=AB25_RS17555;old_locus_tag=AB25_1499 NZ_JJMC01000024.1 Protein Homology CDS 87735 89414 . + 0 ID=cds-WP_000810467.1;Parent=gene-AB25_RS17555;Dbxref=GenBank:WP_000810467.1;Name=WP_000810467.1;gbkey=CDS;gene=ycjM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415825.4;locus_tag=AB25_RS17555;product=glucosylglycerate phosphorylase;protein_id=WP_000810467.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 89428 90720 . + . ID=gene-AB25_RS17550;Name=ycjN;gbkey=Gene;gene=ycjN;gene_biotype=protein_coding;locus_tag=AB25_RS17550;old_locus_tag=AB25_1500 NZ_JJMC01000024.1 Protein Homology CDS 89428 90720 . + 0 ID=cds-WP_000597459.1;Parent=gene-AB25_RS17550;Dbxref=GenBank:WP_000597459.1;Name=WP_000597459.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;gene=ycjN;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415826.1;locus_tag=AB25_RS17550;product=ABC transporter substrate-binding protein;protein_id=WP_000597459.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 90741 91622 . + . ID=gene-AB25_RS17545;Name=ycjO;gbkey=Gene;gene=ycjO;gene_biotype=protein_coding;locus_tag=AB25_RS17545;old_locus_tag=AB25_1501 NZ_JJMC01000024.1 Protein Homology CDS 90741 91622 . + 0 ID=cds-WP_001080790.1;Parent=gene-AB25_RS17545;Dbxref=GenBank:WP_001080790.1;Name=WP_001080790.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;gene=ycjO;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415827.1;locus_tag=AB25_RS17545;product=carbohydrate ABC transporter permease;protein_id=WP_001080790.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 91609 92451 . + . ID=gene-AB25_RS17540;Name=ycjP;gbkey=Gene;gene=ycjP;gene_biotype=protein_coding;locus_tag=AB25_RS17540;old_locus_tag=AB25_1502 NZ_JJMC01000024.1 Protein Homology CDS 91609 92451 . + 0 ID=cds-WP_000224659.1;Parent=gene-AB25_RS17540;Dbxref=GenBank:WP_000224659.1;Name=WP_000224659.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;gene=ycjP;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415828.1;locus_tag=AB25_RS17540;product=carbohydrate ABC transporter permease;protein_id=WP_000224659.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 92482 93534 . + . ID=gene-AB25_RS17535;Name=ycjQ;gbkey=Gene;gene=ycjQ;gene_biotype=protein_coding;locus_tag=AB25_RS17535;old_locus_tag=AB25_1503 NZ_JJMC01000024.1 Protein Homology CDS 92482 93534 . + 0 ID=cds-WP_000737352.1;Parent=gene-AB25_RS17535;Dbxref=GenBank:WP_000737352.1;Name=WP_000737352.1;Ontology_term=GO:0008270,GO:0016616,GO:0030554;gbkey=CDS;gene=ycjQ;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415829.1;locus_tag=AB25_RS17535;product=zinc-dependent alcohol dehydrogenase;protein_id=WP_000737352.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 93552 94340 . + . ID=gene-AB25_RS17530;Name=ycjR;gbkey=Gene;gene=ycjR;gene_biotype=protein_coding;locus_tag=AB25_RS17530;old_locus_tag=AB25_1504 NZ_JJMC01000024.1 Protein Homology CDS 93552 94340 . + 0 ID=cds-WP_032178066.1;Parent=gene-AB25_RS17530;Dbxref=GenBank:WP_032178066.1;Name=WP_032178066.1;Ontology_term=GO:0003824,GO:0016853;gbkey=CDS;gene=ycjR;go_function=catalytic activity|0003824||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415830.2;locus_tag=AB25_RS17530;product=sugar phosphate isomerase/epimerase family protein;protein_id=WP_032178066.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 94350 95405 . + . ID=gene-AB25_RS17525;Name=ycjS;gbkey=Gene;gene=ycjS;gene_biotype=protein_coding;locus_tag=AB25_RS17525;old_locus_tag=AB25_1505 NZ_JJMC01000024.1 Protein Homology CDS 94350 95405 . + 0 ID=cds-WP_001373365.1;Parent=gene-AB25_RS17525;Dbxref=GenBank:WP_001373365.1;Name=WP_001373365.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;gene=ycjS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415831.1;locus_tag=AB25_RS17525;product=Gfo/Idh/MocA family protein;protein_id=WP_001373365.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 95402 97669 . + . ID=gene-AB25_RS17520;Name=ycjT;gbkey=Gene;gene=ycjT;gene_biotype=protein_coding;locus_tag=AB25_RS17520;old_locus_tag=AB25_1506 NZ_JJMC01000024.1 Protein Homology CDS 95402 97669 . + 0 ID=cds-WP_000198012.1;Parent=gene-AB25_RS17520;Dbxref=GenBank:WP_000198012.1;Name=WP_000198012.1;gbkey=CDS;gene=ycjT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309922.1;locus_tag=AB25_RS17520;product=kojibiose phosphorylase;protein_id=WP_000198012.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 97666 98325 . + . ID=gene-AB25_RS17515;Name=pgmB;gbkey=Gene;gene=pgmB;gene_biotype=protein_coding;locus_tag=AB25_RS17515;old_locus_tag=AB25_1507 NZ_JJMC01000024.1 Protein Homology CDS 97666 98325 . + 0 ID=cds-WP_000775800.1;Parent=gene-AB25_RS17515;Dbxref=GenBank:WP_000775800.1;Name=WP_000775800.1;Ontology_term=GO:0005975,GO:0000287,GO:0008801;gbkey=CDS;gene=pgmB;go_function=magnesium ion binding|0000287||IEA,beta-phosphoglucomutase activity|0008801||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415833.1;locus_tag=AB25_RS17515;product=beta-phosphoglucomutase;protein_id=WP_000775800.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 98339 99421 . + . ID=gene-AB25_RS17510;Name=AB25_RS17510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS17510;old_locus_tag=AB25_1508 NZ_JJMC01000024.1 Protein Homology CDS 98339 99421 . + 0 ID=cds-WP_001391790.1;Parent=gene-AB25_RS17510;Dbxref=GenBank:WP_001391790.1;Name=WP_001391790.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309924.1;locus_tag=AB25_RS17510;product=ABC transporter ATP-binding protein;protein_id=WP_001391790.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 99466 100371 . + . ID=gene-AB25_RS17505;Name=ompG;gbkey=Gene;gene=ompG;gene_biotype=protein_coding;locus_tag=AB25_RS17505;old_locus_tag=AB25_1509 NZ_JJMC01000024.1 Protein Homology CDS 99466 100371 . + 0 ID=cds-WP_000735236.1;Parent=gene-AB25_RS17505;Dbxref=GenBank:WP_000735236.1;Name=WP_000735236.1;gbkey=CDS;gene=ompG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415835.1;locus_tag=AB25_RS17505;product=monomeric porin OmpG;protein_id=WP_000735236.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 100482 101480 . - . ID=gene-AB25_RS17500;Name=ycjW;gbkey=Gene;gene=ycjW;gene_biotype=protein_coding;locus_tag=AB25_RS17500;old_locus_tag=AB25_1510 NZ_JJMC01000024.1 Protein Homology CDS 100482 101480 . - 0 ID=cds-WP_000075377.1;Parent=gene-AB25_RS17500;Dbxref=GenBank:WP_000075377.1;Name=WP_000075377.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=ycjW;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415836.1;locus_tag=AB25_RS17500;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000075377.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 101635 103032 . + . ID=gene-AB25_RS17495;Name=ycjX;gbkey=Gene;gene=ycjX;gene_biotype=protein_coding;locus_tag=AB25_RS17495;old_locus_tag=AB25_1511 NZ_JJMC01000024.1 Protein Homology CDS 101635 103032 . + 0 ID=cds-WP_000825766.1;Parent=gene-AB25_RS17495;Dbxref=GenBank:WP_000825766.1;Name=WP_000825766.1;gbkey=CDS;gene=ycjX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126510.1;locus_tag=AB25_RS17495;product=YcjX family protein;protein_id=WP_000825766.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 103029 104090 . + . ID=gene-AB25_RS17490;Name=ycjF;gbkey=Gene;gene=ycjF;gene_biotype=protein_coding;locus_tag=AB25_RS17490;old_locus_tag=AB25_1512 NZ_JJMC01000024.1 Protein Homology CDS 103029 104090 . + 0 ID=cds-WP_000138728.1;Parent=gene-AB25_RS17490;Dbxref=GenBank:WP_000138728.1;Name=WP_000138728.1;gbkey=CDS;gene=ycjF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415838.1;locus_tag=AB25_RS17490;product=YcjF family protein;protein_id=WP_000138728.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 104238 105779 . + . ID=gene-AB25_RS17485;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=AB25_RS17485;old_locus_tag=AB25_1513 NZ_JJMC01000024.1 Protein Homology CDS 104238 105779 . + 0 ID=cds-WP_001300658.1;Parent=gene-AB25_RS17485;Dbxref=GenBank:WP_001300658.1;Name=WP_001300658.1;Ontology_term=GO:0006355,GO:0008134;gbkey=CDS;gene=tyrR;go_function=transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415839.1;locus_tag=AB25_RS17485;product=transcriptional regulator TyrR;protein_id=WP_001300658.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 105823 106329 . - . ID=gene-AB25_RS17480;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=AB25_RS17480;old_locus_tag=AB25_1514 NZ_JJMC01000024.1 Protein Homology CDS 105823 106329 . - 0 ID=cds-WP_000084387.1;Parent=gene-AB25_RS17480;Dbxref=GenBank:WP_000084387.1;Name=WP_000084387.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309930.1;locus_tag=AB25_RS17480;product=thiol peroxidase;protein_id=WP_000084387.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 106448 107413 . + . ID=gene-AB25_RS17475;Name=ycjG;gbkey=Gene;gene=ycjG;gene_biotype=protein_coding;locus_tag=AB25_RS17475;old_locus_tag=AB25_1515 NZ_JJMC01000024.1 Protein Homology CDS 106448 107413 . + 0 ID=cds-WP_001324049.1;Parent=gene-AB25_RS17475;Dbxref=GenBank:WP_001324049.1;Name=WP_001324049.1;Ontology_term=GO:0009063,GO:0016855;gbkey=CDS;gene=ycjG;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707230.2;locus_tag=AB25_RS17475;product=L-Ala-D/L-Glu epimerase;protein_id=WP_001324049.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 107388 108116 . - . ID=gene-AB25_RS17470;Name=mpaA;gbkey=Gene;gene=mpaA;gene_biotype=protein_coding;locus_tag=AB25_RS17470;old_locus_tag=AB25_1516 NZ_JJMC01000024.1 Protein Homology CDS 107388 108116 . - 0 ID=cds-WP_001295589.1;Parent=gene-AB25_RS17470;Dbxref=GenBank:WP_001295589.1;Name=WP_001295589.1;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;gene=mpaA;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415842.2;locus_tag=AB25_RS17470;product=murein tripeptide amidase MpaA;protein_id=WP_001295589.1;transl_table=11 NZ_JJMC01000024.1 RefSeq pseudogene 108244 108381 . - . ID=gene-AB25_RS31680;Name=AB25_RS31680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS31680;old_locus_tag=AB25_1517;partial=true;pseudo=true;start_range=.,108244 NZ_JJMC01000024.1 Protein Homology CDS 108244 108381 . - 0 ID=cds-AB25_RS31680;Parent=gene-AB25_RS31680;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707232.2;locus_tag=AB25_RS31680;partial=true;product=NAD-dependent dehydratase;pseudo=true;start_range=.,108244;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 108452 109372 . - . ID=gene-AB25_RS17460;Name=ycjY;gbkey=Gene;gene=ycjY;gene_biotype=protein_coding;locus_tag=AB25_RS17460;old_locus_tag=AB25_1518 NZ_JJMC01000024.1 Protein Homology CDS 108452 109372 . - 0 ID=cds-WP_001345592.1;Parent=gene-AB25_RS17460;Dbxref=GenBank:WP_001345592.1;Name=WP_001345592.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ycjY;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415843.2;locus_tag=AB25_RS17460;product=alpha/beta hydrolase;protein_id=WP_001345592.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 109510 110409 . + . ID=gene-AB25_RS17455;Name=pgrR;gbkey=Gene;gene=pgrR;gene_biotype=protein_coding;locus_tag=AB25_RS17455;old_locus_tag=AB25_1519 NZ_JJMC01000024.1 Protein Homology CDS 109510 110409 . + 0 ID=cds-WP_000817693.1;Parent=gene-AB25_RS17455;Dbxref=GenBank:WP_000817693.1;Name=WP_000817693.1;gbkey=CDS;gene=pgrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309937.1;locus_tag=AB25_RS17455;product=DNA-binding transcriptional regulator PgrR;protein_id=WP_000817693.1;transl_table=11 NZ_JJMC01000024.1 RefSeq pseudogene 110507 110599 . + . ID=gene-AB25_RS32940;Name=AB25_RS32940;end_range=110599,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32940;old_locus_tag=AB25_1520;partial=true;pseudo=true;start_range=.,110507 NZ_JJMC01000024.1 Protein Homology CDS 110507 110599 . + 0 ID=cds-AB25_RS32940;Parent=gene-AB25_RS32940;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=110599,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170112.1;locus_tag=AB25_RS32940;partial=true;product=epoxyqueuosine reductase QueH;pseudo=true;start_range=.,110507;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 110746 112359 . + . ID=gene-AB25_RS17445;Name=mppA;gbkey=Gene;gene=mppA;gene_biotype=protein_coding;locus_tag=AB25_RS17445;old_locus_tag=AB25_1521 NZ_JJMC01000024.1 Protein Homology CDS 110746 112359 . + 0 ID=cds-WP_000683020.1;Parent=gene-AB25_RS17445;Dbxref=GenBank:WP_000683020.1;Name=WP_000683020.1;gbkey=CDS;gene=mppA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415845.2;locus_tag=AB25_RS17445;product=murein tripeptide ABC transporter substrate-binding protein MppA;protein_id=WP_000683020.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 112410 113441 . - . ID=gene-AB25_RS17440;Name=ynaI;gbkey=Gene;gene=ynaI;gene_biotype=protein_coding;locus_tag=AB25_RS17440;old_locus_tag=AB25_1522 NZ_JJMC01000024.1 Protein Homology CDS 112410 113441 . - 0 ID=cds-WP_000559900.1;Parent=gene-AB25_RS17440;Dbxref=GenBank:WP_000559900.1;Name=WP_000559900.1;gbkey=CDS;gene=ynaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309939.1;locus_tag=AB25_RS17440;product=low conductance mechanosensitive channel YnaI;protein_id=WP_000559900.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 113685 113942 . + . ID=gene-AB25_RS17435;Name=ynaJ;gbkey=Gene;gene=ynaJ;gene_biotype=protein_coding;locus_tag=AB25_RS17435;old_locus_tag=AB25_1523 NZ_JJMC01000024.1 Protein Homology CDS 113685 113942 . + 0 ID=cds-WP_000605090.1;Parent=gene-AB25_RS17435;Dbxref=GenBank:WP_000605090.1;Name=WP_000605090.1;gbkey=CDS;gene=ynaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309940.1;locus_tag=AB25_RS17435;product=DUF2534 family protein;protein_id=WP_000605090.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 113992 114942 . - . ID=gene-AB25_RS17430;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;locus_tag=AB25_RS17430;old_locus_tag=AB25_1524 NZ_JJMC01000024.1 Protein Homology CDS 113992 114942 . - 0 ID=cds-WP_001262123.1;Parent=gene-AB25_RS17430;Dbxref=GenBank:WP_001262123.1;Name=WP_001262123.1;gbkey=CDS;gene=uspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309941.1;locus_tag=AB25_RS17430;product=universal stress protein UspE;protein_id=WP_001262123.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 115094 115846 . - . ID=gene-AB25_RS17425;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=AB25_RS17425;old_locus_tag=AB25_1525 NZ_JJMC01000024.1 Protein Homology CDS 115094 115846 . - 0 ID=cds-WP_000611911.1;Parent=gene-AB25_RS17425;Dbxref=GenBank:WP_000611911.1;Name=WP_000611911.1;gbkey=CDS;gene=fnr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007849744.1;locus_tag=AB25_RS17425;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=WP_000611911.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 116041 116556 . - . ID=gene-AB25_RS17420;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=AB25_RS17420;old_locus_tag=AB25_1526 NZ_JJMC01000024.1 Protein Homology CDS 116041 116556 . - 0 ID=cds-WP_000945005.1;Parent=gene-AB25_RS17420;Dbxref=GenBank:WP_000945005.1;Name=WP_000945005.1;Ontology_term=GO:0006281,GO:0003908;gbkey=CDS;gene=ogt;go_function=methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415851.1;locus_tag=AB25_RS17420;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_000945005.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 116567 118093 . - . ID=gene-AB25_RS17415;Name=abgT;gbkey=Gene;gene=abgT;gene_biotype=protein_coding;locus_tag=AB25_RS17415;old_locus_tag=AB25_1527 NZ_JJMC01000024.1 Protein Homology CDS 116567 118093 . - 0 ID=cds-WP_000062967.1;Parent=gene-AB25_RS17415;Dbxref=GenBank:WP_000062967.1;Name=WP_000062967.1;gbkey=CDS;gene=abgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415852.2;locus_tag=AB25_RS17415;product=p-aminobenzoyl-glutamate transporter;protein_id=WP_000062967.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 118130 119575 . - . ID=gene-AB25_RS17410;Name=abgB;gbkey=Gene;gene=abgB;gene_biotype=protein_coding;locus_tag=AB25_RS17410;old_locus_tag=AB25_1528 NZ_JJMC01000024.1 Protein Homology CDS 118130 119575 . - 0 ID=cds-WP_001156471.1;Parent=gene-AB25_RS17410;Dbxref=GenBank:WP_001156471.1;Name=WP_001156471.1;gbkey=CDS;gene=abgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415853.1;locus_tag=AB25_RS17410;product=p-aminobenzoyl-glutamate hydrolase subunit AbgB;protein_id=WP_001156471.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 119575 120885 . - . ID=gene-AB25_RS17405;Name=abgA;gbkey=Gene;gene=abgA;gene_biotype=protein_coding;locus_tag=AB25_RS17405;old_locus_tag=AB25_1529 NZ_JJMC01000024.1 Protein Homology CDS 119575 120885 . - 0 ID=cds-WP_000444949.1;Parent=gene-AB25_RS17405;Dbxref=GenBank:WP_000444949.1;Name=WP_000444949.1;gbkey=CDS;gene=abgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415854.4;locus_tag=AB25_RS17405;product=p-aminobenzoyl-glutamate hydrolase subunit AbgA;protein_id=WP_000444949.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 121061 121969 . + . ID=gene-AB25_RS17400;Name=abgR;gbkey=Gene;gene=abgR;gene_biotype=protein_coding;locus_tag=AB25_RS17400;old_locus_tag=AB25_1530 NZ_JJMC01000024.1 Protein Homology CDS 121061 121969 . + 0 ID=cds-WP_000885467.1;Parent=gene-AB25_RS17400;Dbxref=GenBank:WP_000885467.1;Name=WP_000885467.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=abgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309950.1;locus_tag=AB25_RS17400;product=LysR family transcriptional regulator;protein_id=WP_000885467.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 122299 122862 . + . ID=gene-AB25_RS17395;Name=smrA;gbkey=Gene;gene=smrA;gene_biotype=protein_coding;locus_tag=AB25_RS17395;old_locus_tag=AB25_1531 NZ_JJMC01000024.1 Protein Homology CDS 122299 122862 . + 0 ID=cds-WP_001046821.1;Parent=gene-AB25_RS17395;Dbxref=GenBank:WP_001046821.1;Name=WP_001046821.1;gbkey=CDS;gene=smrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309951.1;locus_tag=AB25_RS17395;product=DNA endonuclease SmrA;protein_id=WP_001046821.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 122883 124115 . - . ID=gene-AB25_RS17390;Name=dgcM;gbkey=Gene;gene=dgcM;gene_biotype=protein_coding;locus_tag=AB25_RS17390;old_locus_tag=AB25_1532 NZ_JJMC01000024.1 Protein Homology CDS 122883 124115 . - 0 ID=cds-WP_000628065.1;Parent=gene-AB25_RS17390;Dbxref=GenBank:WP_000628065.1;Name=WP_000628065.1;gbkey=CDS;gene=dgcM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309952.2;locus_tag=AB25_RS17390;product=diguanylate cyclase DgcM;protein_id=WP_000628065.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 124309 124356 . + . ID=gene-AB25_RS32245;Name=ydaN;gbkey=Gene;gene=ydaN;gene_biotype=protein_coding;locus_tag=AB25_RS32245 NZ_JJMC01000024.1 Protein Homology CDS 124309 124356 . + 0 ID=cds-WP_211180494.1;Parent=gene-AB25_RS32245;Dbxref=GenBank:WP_211180494.1;Name=WP_211180494.1;gbkey=CDS;gene=ydaN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051183.1;locus_tag=AB25_RS32245;product=protein YnaN;protein_id=WP_211180494.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 124370 125353 . + . ID=gene-AB25_RS17385;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=AB25_RS17385;old_locus_tag=AB25_1533 NZ_JJMC01000024.1 Protein Homology CDS 124370 125353 . + 0 ID=cds-WP_032170689.1;Parent=gene-AB25_RS17385;Dbxref=GenBank:WP_032170689.1;Name=WP_032170689.1;Ontology_term=GO:0071577,GO:0005385,GO:0005886;gbkey=CDS;gene=zntB;go_component=plasma membrane|0005886||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transmembrane transport|0071577||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309953.1;locus_tag=AB25_RS17385;product=zinc transporter ZntB;protein_id=WP_032170689.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 125628 125801 . + . ID=gene-AB25_RS32675;Name=ynaL;gbkey=Gene;gene=ynaL;gene_biotype=protein_coding;locus_tag=AB25_RS32675 NZ_JJMC01000024.1 Protein Homology CDS 125628 125801 . + 0 ID=cds-WP_001296046.1;Parent=gene-AB25_RS32675;Dbxref=GenBank:WP_001296046.1;Name=WP_001296046.1;gbkey=CDS;gene=ynaL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518775.1;locus_tag=AB25_RS32675;product=protein YnaL;protein_id=WP_001296046.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 125831 127204 . + . ID=gene-AB25_RS17380;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=AB25_RS17380;old_locus_tag=AB25_1534 NZ_JJMC01000024.1 Protein Homology CDS 125831 127204 . + 0 ID=cds-WP_000123718.1;Parent=gene-AB25_RS17380;Dbxref=GenBank:WP_000123718.1;Name=WP_000123718.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309954.1;locus_tag=AB25_RS17380;product=ATP-dependent RNA helicase DbpA;protein_id=WP_000123718.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 127333 128268 . - . ID=gene-AB25_RS17375;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=AB25_RS17375;old_locus_tag=AB25_1535 NZ_JJMC01000024.1 Protein Homology CDS 127333 128268 . - 0 ID=cds-WP_001157407.1;Parent=gene-AB25_RS17375;Dbxref=GenBank:WP_001157407.1;Name=WP_001157407.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309955.1;locus_tag=AB25_RS17375;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_001157407.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 128320 129555 . - . ID=gene-AB25_RS28025;Name=intR;gbkey=Gene;gene=intR;gene_biotype=protein_coding;locus_tag=AB25_RS28025 NZ_JJMC01000024.1 Protein Homology CDS 128320 129555 . - 0 ID=cds-WP_071998852.1;Parent=gene-AB25_RS28025;Dbxref=GenBank:WP_071998852.1;Name=WP_071998852.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;gene=intR;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415861.1;locus_tag=AB25_RS28025;product=tyrosine-type recombinase/integrase;protein_id=WP_071998852.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 129557 129772 . - . ID=gene-AB25_RS17370;Name=xisR;gbkey=Gene;gene=xisR;gene_biotype=protein_coding;locus_tag=AB25_RS17370;old_locus_tag=AB25_1537 NZ_JJMC01000024.1 Protein Homology CDS 129557 129772 . - 0 ID=cds-WP_000079604.1;Parent=gene-AB25_RS17370;Dbxref=GenBank:WP_000079604.1;Name=WP_000079604.1;gbkey=CDS;gene=xisR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309957.2;locus_tag=AB25_RS17370;product=excisionase XisR;protein_id=WP_000079604.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 129851 130060 . - . ID=gene-AB25_RS0125020;Name=rcbA;gbkey=Gene;gene=rcbA;gene_biotype=protein_coding;locus_tag=AB25_RS0125020 NZ_JJMC01000024.1 Protein Homology CDS 129851 130060 . - 0 ID=cds-WP_000276809.1;Parent=gene-AB25_RS0125020;Dbxref=GenBank:WP_000276809.1;Name=WP_000276809.1;gbkey=CDS;gene=rcbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415863.1;locus_tag=AB25_RS0125020;product=double-strand break reduction protein RcbA;protein_id=WP_000276809.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 130053 130247 . - . ID=gene-AB25_RS0125025;Name=ralR;gbkey=Gene;gene=ralR;gene_biotype=protein_coding;locus_tag=AB25_RS0125025 NZ_JJMC01000024.1 Protein Homology CDS 130053 130247 . - 0 ID=cds-WP_050439157.1;Parent=gene-AB25_RS0125025;Dbxref=GenBank:WP_050439157.1;Name=WP_050439157.1;gbkey=CDS;gene=ralR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415864.1;locus_tag=AB25_RS0125025;product=type I toxin-antitoxin system endodeoxyribonuclease toxin RalR;protein_id=WP_050439157.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 130304 131113 . - . ID=gene-AB25_RS17365;Name=recT;gbkey=Gene;gene=recT;gene_biotype=protein_coding;locus_tag=AB25_RS17365;old_locus_tag=AB25_1538 NZ_JJMC01000024.1 Protein Homology CDS 130304 131113 . - 0 ID=cds-WP_000166319.1;Parent=gene-AB25_RS17365;Dbxref=GenBank:WP_000166319.1;Name=WP_000166319.1;Ontology_term=GO:0006259,GO:0003677;gbkey=CDS;gene=recT;go_function=DNA binding|0003677||IEA;go_process=DNA metabolic process|0006259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415865.1;locus_tag=AB25_RS17365;product=recombination protein RecT;protein_id=WP_000166319.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 131106 133706 . - . ID=gene-AB25_RS17360;Name=recE;gbkey=Gene;gene=recE;gene_biotype=protein_coding;locus_tag=AB25_RS17360;old_locus_tag=AB25_1539 NZ_JJMC01000024.1 Protein Homology CDS 131106 133706 . - 0 ID=cds-WP_032295927.1;Parent=gene-AB25_RS17360;Dbxref=GenBank:WP_032295927.1;Name=WP_032295927.1;Ontology_term=GO:0090304,GO:0051908;gbkey=CDS;gene=recE;go_function=double-stranded DNA 5'-3' DNA exonuclease activity|0051908||IEA;go_process=nucleic acid metabolic process|0090304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415866.1;locus_tag=AB25_RS17360;product=exodeoxyribonuclease VIII;protein_id=WP_032295927.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 133808 134083 . - . ID=gene-AB25_RS17355;Name=AB25_RS17355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS17355;old_locus_tag=AB25_1540 NZ_JJMC01000024.1 Protein Homology CDS 133808 134083 . - 0 ID=cds-WP_001774422.1;Parent=gene-AB25_RS17355;Dbxref=GenBank:WP_001774422.1;Name=WP_001774422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415867.1;locus_tag=AB25_RS17355;product=phage protein;protein_id=WP_001774422.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 134158 134328 . - . ID=gene-AB25_RS17350;Name=ydaE;gbkey=Gene;gene=ydaE;gene_biotype=protein_coding;locus_tag=AB25_RS17350;old_locus_tag=AB25_1541 NZ_JJMC01000024.1 Protein Homology CDS 134158 134328 . - 0 ID=cds-WP_001352098.1;Parent=gene-AB25_RS17350;Dbxref=GenBank:WP_001352098.1;Name=WP_001352098.1;gbkey=CDS;gene=ydaE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588451.1;locus_tag=AB25_RS17350;product=YdaE family protein;protein_id=WP_001352098.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 134328 134549 . - . ID=gene-AB25_RS17345;Name=kilR;gbkey=Gene;gene=kilR;gene_biotype=protein_coding;locus_tag=AB25_RS17345;old_locus_tag=AB25_1542 NZ_JJMC01000024.1 Protein Homology CDS 134328 134549 . - 0 ID=cds-WP_000560223.1;Parent=gene-AB25_RS17345;Dbxref=GenBank:WP_000560223.1;Name=WP_000560223.1;gbkey=CDS;gene=kilR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309963.2;locus_tag=AB25_RS17345;product=killing protein KilR;protein_id=WP_000560223.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 134970 135122 . - . ID=gene-AB25_RS27195;Name=ydaF;gbkey=Gene;gene=ydaF;gene_biotype=protein_coding;locus_tag=AB25_RS27195;old_locus_tag=AB25_1543 NZ_JJMC01000024.1 Protein Homology CDS 134970 135122 . - 0 ID=cds-WP_001551042.1;Parent=gene-AB25_RS27195;Dbxref=GenBank:WP_001551042.1;Name=WP_001551042.1;gbkey=CDS;gene=ydaF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016158368.1;locus_tag=AB25_RS27195;product=DUF1391 family protein;protein_id=WP_001551042.1;transl_table=11 NZ_JJMC01000024.1 RefSeq pseudogene 135152 135334 . + . ID=gene-AB25_RS28030;Name=AB25_RS28030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS28030;old_locus_tag=AB25_1544;partial=true;pseudo=true;start_range=.,135152 NZ_JJMC01000024.1 Protein Homology CDS 135152 135334 . + 0 ID=cds-AB25_RS28030;Parent=gene-AB25_RS28030;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415877.1;locus_tag=AB25_RS28030;partial=true;product=YdaU family protein;pseudo=true;start_range=.,135152;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 135341 136087 . + . ID=gene-AB25_RS17340;Name=ydaV;gbkey=Gene;gene=ydaV;gene_biotype=protein_coding;locus_tag=AB25_RS17340;old_locus_tag=AB25_1545 NZ_JJMC01000024.1 Protein Homology CDS 135341 136087 . + 0 ID=cds-WP_001702662.1;Parent=gene-AB25_RS17340;Dbxref=GenBank:WP_001702662.1;Name=WP_001702662.1;gbkey=CDS;gene=ydaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415878.1;locus_tag=AB25_RS17340;product=ATP-binding protein;protein_id=WP_001702662.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 136110 136871 . + . ID=gene-AB25_RS17335;Name=AB25_RS17335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS17335;old_locus_tag=AB25_1546 NZ_JJMC01000024.1 Protein Homology CDS 136110 136871 . + 0 ID=cds-WP_001741626.1;Parent=gene-AB25_RS17335;Dbxref=GenBank:WP_001741626.1;Name=WP_001741626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309973.2;locus_tag=AB25_RS17335;product=DUF1627 domain-containing protein;protein_id=WP_001741626.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 136887 137309 . + . ID=gene-AB25_RS17330;Name=AB25_RS17330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS17330;old_locus_tag=AB25_1547 NZ_JJMC01000024.1 Protein Homology CDS 136887 137309 . + 0 ID=cds-WP_032170690.1;Parent=gene-AB25_RS17330;Dbxref=GenBank:WP_032170690.1;Name=WP_032170690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309975.1;locus_tag=AB25_RS17330;product=DUF977 family protein;protein_id=WP_032170690.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 137470 137973 . + . ID=gene-AB25_RS31690;Name=AB25_RS31690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31690;old_locus_tag=AB25_1548 NZ_JJMC01000024.1 Protein Homology CDS 137470 137973 . + 0 ID=cds-WP_032170691.1;Parent=gene-AB25_RS31690;Dbxref=GenBank:WP_032170691.1;Name=WP_032170691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001405093.1;locus_tag=AB25_RS31690;product=hypothetical protein;protein_id=WP_032170691.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 138094 138867 . - . ID=gene-AB25_RS17320;Name=AB25_RS17320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS17320;old_locus_tag=AB25_1549 NZ_JJMC01000024.1 Protein Homology CDS 138094 138867 . - 0 ID=cds-WP_000200358.1;Parent=gene-AB25_RS17320;Dbxref=GenBank:WP_000200358.1;Name=WP_000200358.1;Ontology_term=GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016158362.1;locus_tag=AB25_RS17320;product=KilA-N domain-containing protein;protein_id=WP_000200358.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 139390 139515 . + . ID=gene-AB25_RS0125030;Name=AB25_RS0125030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0125030 NZ_JJMC01000024.1 Protein Homology CDS 139390 139515 . + 0 ID=cds-WP_001445775.1;Parent=gene-AB25_RS0125030;Dbxref=GenBank:WP_001445775.1;Name=WP_001445775.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416080.1;locus_tag=AB25_RS0125030;product=Hok/Gef family protein;protein_id=WP_001445775.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 139598 139939 . - . ID=gene-AB25_RS0125035;Name=AB25_RS0125035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0125035 NZ_JJMC01000024.1 Protein Homology CDS 139598 139939 . - 0 ID=cds-WP_001445776.1;Parent=gene-AB25_RS0125035;Dbxref=GenBank:WP_001445776.1;Name=WP_001445776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001445776.1;locus_tag=AB25_RS0125035;product=DUF1971 domain-containing protein;protein_id=WP_001445776.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 140807 141406 . + . ID=gene-AB25_RS17315;Name=AB25_RS17315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS17315;old_locus_tag=AB25_1551 NZ_JJMC01000024.1 Protein Homology CDS 140807 141406 . + 0 ID=cds-WP_032170692.1;Parent=gene-AB25_RS17315;Dbxref=GenBank:WP_032170692.1;Name=WP_032170692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707250.1;locus_tag=AB25_RS17315;product=DUF1367 family protein;protein_id=WP_032170692.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 141406 141696 . + . ID=gene-AB25_RS17310;Name=AB25_RS17310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS17310;old_locus_tag=AB25_1552 NZ_JJMC01000024.1 Protein Homology CDS 141406 141696 . + 0 ID=cds-WP_001551052.1;Parent=gene-AB25_RS17310;Dbxref=GenBank:WP_001551052.1;Name=WP_001551052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707251.1;locus_tag=AB25_RS17310;product=DUF1364 domain-containing protein;protein_id=WP_001551052.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 141693 142235 . + . ID=gene-AB25_RS17305;Name=AB25_RS17305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS17305;old_locus_tag=AB25_1553 NZ_JJMC01000024.1 Protein Homology CDS 141693 142235 . + 0 ID=cds-WP_032170693.1;Parent=gene-AB25_RS17305;Dbxref=GenBank:WP_032170693.1;Name=WP_032170693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001502553.1;locus_tag=AB25_RS17305;product=DUF1133 family protein;protein_id=WP_032170693.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 142588 142663 . + . ID=gene-AB25_RS17300;Name=AB25_RS17300;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS17300;old_locus_tag=AB25_1554 NZ_JJMC01000024.1 tRNAscan-SE tRNA 142588 142663 . + . ID=rna-AB25_RS17300;Parent=gene-AB25_RS17300;anticodon=(pos:142621..142623);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS17300;product=tRNA-Thr NZ_JJMC01000024.1 tRNAscan-SE exon 142588 142663 . + . ID=exon-AB25_RS17300-1;Parent=rna-AB25_RS17300;anticodon=(pos:142621..142623);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS17300;product=tRNA-Thr NZ_JJMC01000024.1 RefSeq gene 142667 142741 . + . ID=gene-AB25_RS17295;Name=AB25_RS17295;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS17295;old_locus_tag=AB25_1555 NZ_JJMC01000024.1 tRNAscan-SE tRNA 142667 142741 . + . ID=rna-AB25_RS17295;Parent=gene-AB25_RS17295;anticodon=(pos:142700..142702);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS17295;product=tRNA-Gly NZ_JJMC01000024.1 tRNAscan-SE exon 142667 142741 . + . ID=exon-AB25_RS17295-1;Parent=rna-AB25_RS17295;anticodon=(pos:142700..142702);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS17295;product=tRNA-Gly NZ_JJMC01000024.1 RefSeq gene 143034 143249 . + . ID=gene-AB25_RS17290;Name=AB25_RS17290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS17290;old_locus_tag=AB25_1557 NZ_JJMC01000024.1 Protein Homology CDS 143034 143249 . + 0 ID=cds-WP_000839572.1;Parent=gene-AB25_RS17290;Dbxref=GenBank:WP_000839572.1;Name=WP_000839572.1;Ontology_term=GO:0140911,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=pore-forming activity|0140911||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707874.1;locus_tag=AB25_RS17290;product=class II holin family protein;protein_id=WP_000839572.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 143254 143604 . + . ID=gene-AB25_RS17285;Name=AB25_RS17285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS17285;old_locus_tag=AB25_1558 NZ_JJMC01000024.1 Protein Homology CDS 143254 143604 . + 0 ID=cds-WP_000193264.1;Parent=gene-AB25_RS17285;Dbxref=GenBank:WP_000193264.1;Name=WP_000193264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193290.1;locus_tag=AB25_RS17285;product=YdfR family protein;protein_id=WP_000193264.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 143668 144201 . + . ID=gene-AB25_RS17280;Name=rrrQ;gbkey=Gene;gene=rrrQ;gene_biotype=protein_coding;locus_tag=AB25_RS17280;old_locus_tag=AB25_1559 NZ_JJMC01000024.1 Protein Homology CDS 143668 144201 . + 0 ID=cds-WP_000992101.1;Parent=gene-AB25_RS17280;Dbxref=GenBank:WP_000992101.1;Name=WP_000992101.1;gbkey=CDS;gene=rrrQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416072.1;locus_tag=AB25_RS17280;product=lysozyme;protein_id=WP_000992101.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 144198 144662 . + . ID=gene-AB25_RS32945;Name=AB25_RS32945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32945;old_locus_tag=AB25_1560 NZ_JJMC01000024.1 Protein Homology CDS 144198 144662 . + 0 ID=cds-WP_032170694.1;Parent=gene-AB25_RS32945;Dbxref=GenBank:WP_032170694.1;Name=WP_032170694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082741.1;locus_tag=AB25_RS32945;product=lysis protein;protein_id=WP_032170694.1;transl_table=11 NZ_JJMC01000024.1 RefSeq pseudogene 144800 146256 . + . ID=gene-AB25_RS17270;Name=trkG;gbkey=Gene;gene=trkG;gene_biotype=pseudogene;locus_tag=AB25_RS17270;old_locus_tag=AB25_1561;pseudo=true NZ_JJMC01000024.1 Protein Homology CDS 144800 146256 . + 0 ID=cds-AB25_RS17270;Parent=gene-AB25_RS17270;Note=frameshifted;gbkey=CDS;gene=trkG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415881.1;locus_tag=AB25_RS17270;product=Trk system potassium transporter TrkG;pseudo=true;transl_table=11 NZ_JJMC01000024.1 RefSeq pseudogene 146415 147866 . + . ID=gene-AB25_RS17265;Name=AB25_RS17265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS17265;old_locus_tag=AB25_1562;partial=true;pseudo=true;start_range=.,146415 NZ_JJMC01000024.1 Protein Homology CDS 146415 147866 . + 0 ID=cds-AB25_RS17265;Parent=gene-AB25_RS17265;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364453.1;locus_tag=AB25_RS17265;partial=true;product=tail fiber domain-containing protein;pseudo=true;start_range=.,146415;transl_table=11 NZ_JJMC01000024.1 RefSeq pseudogene 147915 148049 . + . ID=gene-AB25_RS28040;Name=AB25_RS28040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS28040;partial=true;pseudo=true;start_range=.,147915 NZ_JJMC01000024.1 Protein Homology CDS 147915 148049 . + 0 ID=cds-AB25_RS28040;Parent=gene-AB25_RS28040;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000885598.1;locus_tag=AB25_RS28040;partial=true;product=tail fiber assembly protein;pseudo=true;start_range=.,147915;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 148123 149454 . - . ID=gene-AB25_RS17260;Name=AB25_RS17260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS17260;old_locus_tag=AB25_1563 NZ_JJMC01000024.1 Protein Homology CDS 148123 149454 . - 0 ID=cds-WP_024046390.1;Parent=gene-AB25_RS17260;Dbxref=GenBank:WP_024046390.1;Name=WP_024046390.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621;gbkey=CDS;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000586336.1;locus_tag=AB25_RS17260;product=sensor domain-containing diguanylate cyclase;protein_id=WP_024046390.1;transl_table=11 NZ_JJMC01000024.1 RefSeq gene 149720 150700 . - . ID=gene-AB25_RS17255;Name=AB25_RS17255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS17255;old_locus_tag=AB25_1564 NZ_JJMC01000024.1 Protein Homology CDS 149720 150700 . - 0 ID=cds-WP_000019402.1;Parent=gene-AB25_RS17255;Dbxref=GenBank:WP_000019402.1;Name=WP_000019402.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416498.2;locus_tag=AB25_RS17255;product=IS5-like element IS5 family transposase;protein_id=WP_000019402.1;transl_table=11 ##sequence-region NZ_JJMC01000025.1 1 70593 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000025.1 RefSeq region 1 70593 . + . ID=NZ_JJMC01000025.1:1..70593;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000025.1 RefSeq gene 1 364 . + . ID=gene-AB25_RS0125040;Name=AB25_RS0125040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0125040;old_locus_tag=AB25_1565;partial=true;start_range=.,1 NZ_JJMC01000025.1 Protein Homology CDS 1 364 . + 1 ID=cds-WP_162752925.1;Parent=gene-AB25_RS0125040;Dbxref=GenBank:WP_162752925.1;Name=WP_162752925.1;Ontology_term=GO:0006310,GO:0032196,GO:0003677,GO:0004519,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415949.3;locus_tag=AB25_RS0125040;partial=true;product=RNA-guided endonuclease InsQ/TnpB family protein;protein_id=WP_162752925.1;start_range=.,1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 404 1618 . - . ID=gene-AB25_RS17250;Name=ydcO;gbkey=Gene;gene=ydcO;gene_biotype=protein_coding;locus_tag=AB25_RS17250;old_locus_tag=AB25_1566 NZ_JJMC01000025.1 Protein Homology CDS 404 1618 . - 0 ID=cds-WP_071606758.1;Parent=gene-AB25_RS17250;Dbxref=GenBank:WP_071606758.1;Name=WP_071606758.1;gbkey=CDS;gene=ydcO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748359.1;locus_tag=AB25_RS17250;product=BenE family transporter YdcO;protein_id=WP_071606758.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 1671 2207 . + . ID=gene-AB25_RS17245;Name=sutR;gbkey=Gene;gene=sutR;gene_biotype=protein_coding;locus_tag=AB25_RS17245;old_locus_tag=AB25_1567 NZ_JJMC01000025.1 Protein Homology CDS 1671 2207 . + 0 ID=cds-WP_000429152.1;Parent=gene-AB25_RS17245;Dbxref=GenBank:WP_000429152.1;Name=WP_000429152.1;gbkey=CDS;gene=sutR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415951.1;locus_tag=AB25_RS17245;product=DNA-binding transcriptional regulator SutR;protein_id=WP_000429152.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 2280 4241 . + . ID=gene-AB25_RS17240;Name=rlhA;gbkey=Gene;gene=rlhA;gene_biotype=protein_coding;locus_tag=AB25_RS17240;old_locus_tag=AB25_1568 NZ_JJMC01000025.1 Protein Homology CDS 2280 4241 . + 0 ID=cds-WP_001405337.1;Parent=gene-AB25_RS17240;Dbxref=GenBank:WP_001405337.1;Name=WP_001405337.1;gbkey=CDS;gene=rlhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415952.2;locus_tag=AB25_RS17240;product=23S rRNA 5-hydroxycytidine C2501 synthase;protein_id=WP_001405337.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 4333 4563 . - . ID=gene-AB25_RS17235;Name=yncJ;gbkey=Gene;gene=yncJ;gene_biotype=protein_coding;locus_tag=AB25_RS17235;old_locus_tag=AB25_1569 NZ_JJMC01000025.1 Protein Homology CDS 4333 4563 . - 0 ID=cds-WP_000494244.1;Parent=gene-AB25_RS17235;Dbxref=GenBank:WP_000494244.1;Name=WP_000494244.1;gbkey=CDS;gene=yncJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415953.1;locus_tag=AB25_RS17235;product=YncJ family protein;protein_id=WP_000494244.1;transl_table=11 NZ_JJMC01000025.1 RefSeq pseudogene 4785 4939 . + . ID=gene-AB25_RS0125045;Name=AB25_RS0125045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS0125045;pseudo=true NZ_JJMC01000025.1 Protein Homology CDS 4785 4939 . + 0 ID=cds-AB25_RS0125045;Parent=gene-AB25_RS0125045;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415954.2;locus_tag=AB25_RS0125045;product=mRNA interferase;pseudo=true;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 4985 5401 . + . ID=gene-AB25_RS17230;Name=hicB;gbkey=Gene;gene=hicB;gene_biotype=protein_coding;locus_tag=AB25_RS17230;old_locus_tag=AB25_1571 NZ_JJMC01000025.1 Protein Homology CDS 4985 5401 . + 0 ID=cds-WP_001270286.1;Parent=gene-AB25_RS17230;Dbxref=GenBank:WP_001270286.1;Name=WP_001270286.1;gbkey=CDS;gene=hicB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415955.2;locus_tag=AB25_RS17230;product=type II toxin-antitoxin system antitoxin HicB;protein_id=WP_001270286.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 5480 6886 . + . ID=gene-AB25_RS17225;Name=ydcR;gbkey=Gene;gene=ydcR;gene_biotype=protein_coding;locus_tag=AB25_RS17225;old_locus_tag=AB25_1572 NZ_JJMC01000025.1 Protein Homology CDS 5480 6886 . + 0 ID=cds-WP_000760615.1;Parent=gene-AB25_RS17225;Dbxref=GenBank:WP_000760615.1;Name=WP_000760615.1;Ontology_term=GO:0030170;gbkey=CDS;gene=ydcR;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415956.1;locus_tag=AB25_RS17225;product=PLP-dependent aminotransferase family protein;protein_id=WP_000760615.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 7131 8276 . + . ID=gene-AB25_RS17220;Name=ydcS;gbkey=Gene;gene=ydcS;gene_biotype=protein_coding;locus_tag=AB25_RS17220;old_locus_tag=AB25_1573 NZ_JJMC01000025.1 Protein Homology CDS 7131 8276 . + 0 ID=cds-WP_001392245.1;Parent=gene-AB25_RS17220;Dbxref=GenBank:WP_001392245.1;Name=WP_001392245.1;gbkey=CDS;gene=ydcS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415957.1;locus_tag=AB25_RS17220;product=putative ABC transporter substrate-binding protein YdcS;protein_id=WP_001392245.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 8294 9307 . + . ID=gene-AB25_RS17215;Name=ydcT;gbkey=Gene;gene=ydcT;gene_biotype=protein_coding;locus_tag=AB25_RS17215;old_locus_tag=AB25_1574 NZ_JJMC01000025.1 Protein Homology CDS 8294 9307 . + 0 ID=cds-WP_024169426.1;Parent=gene-AB25_RS17215;Dbxref=GenBank:WP_024169426.1;Name=WP_024169426.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=ydcT;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415958.1;locus_tag=AB25_RS17215;product=ABC transporter ATP-binding protein;protein_id=WP_024169426.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 9308 10249 . + . ID=gene-AB25_RS17210;Name=ydcU;gbkey=Gene;gene=ydcU;gene_biotype=protein_coding;locus_tag=AB25_RS17210;old_locus_tag=AB25_1575 NZ_JJMC01000025.1 Protein Homology CDS 9308 10249 . + 0 ID=cds-WP_001251315.1;Parent=gene-AB25_RS17210;Dbxref=GenBank:WP_001251315.1;Name=WP_001251315.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=ydcU;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310073.1;locus_tag=AB25_RS17210;product=ABC transporter permease;protein_id=WP_001251315.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 10239 11033 . + . ID=gene-AB25_RS17205;Name=ydcV;gbkey=Gene;gene=ydcV;gene_biotype=protein_coding;locus_tag=AB25_RS17205;old_locus_tag=AB25_1576 NZ_JJMC01000025.1 Protein Homology CDS 10239 11033 . + 0 ID=cds-WP_000555471.1;Parent=gene-AB25_RS17205;Dbxref=GenBank:WP_000555471.1;Name=WP_000555471.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=ydcV;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310074.1;locus_tag=AB25_RS17205;product=ABC transporter permease;protein_id=WP_000555471.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 11055 12479 . + . ID=gene-AB25_RS17200;Name=patD;gbkey=Gene;gene=patD;gene_biotype=protein_coding;locus_tag=AB25_RS17200;old_locus_tag=AB25_1577 NZ_JJMC01000025.1 Protein Homology CDS 11055 12479 . + 0 ID=cds-WP_001163890.1;Parent=gene-AB25_RS17200;Dbxref=GenBank:WP_001163890.1;Name=WP_001163890.1;Ontology_term=GO:0009447,GO:0019145,GO:0051287;gbkey=CDS;gene=patD;go_function=aminobutyraldehyde dehydrogenase (NAD+) activity|0019145||IEA,NAD binding|0051287||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310075.1;locus_tag=AB25_RS17200;product=aminobutyraldehyde dehydrogenase;protein_id=WP_001163890.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 12576 12671 . - . ID=gene-AB25_RS28045;Name=yncL;gbkey=Gene;gene=yncL;gene_biotype=protein_coding;locus_tag=AB25_RS28045 NZ_JJMC01000025.1 Protein Homology CDS 12576 12671 . - 0 ID=cds-WP_001303494.1;Parent=gene-AB25_RS28045;Dbxref=GenBank:WP_001303494.1;Name=WP_001303494.1;gbkey=CDS;gene=yncL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165318.1;locus_tag=AB25_RS28045;product=stress response membrane protein YncL;protein_id=WP_001303494.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 12866 13039 . + . ID=gene-AB25_RS0125055;Name=ortT;gbkey=Gene;gene=ortT;gene_biotype=protein_coding;locus_tag=AB25_RS0125055;old_locus_tag=AB25_1579 NZ_JJMC01000025.1 Protein Homology CDS 12866 13039 . + 0 ID=cds-WP_000061178.1;Parent=gene-AB25_RS0125055;Dbxref=GenBank:WP_000061178.1;Name=WP_000061178.1;gbkey=CDS;gene=ortT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415962.2;locus_tag=AB25_RS0125055;product=orphan toxin OrtT;protein_id=WP_000061178.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 13125 13358 . + . ID=gene-AB25_RS17195;Name=ydcY;gbkey=Gene;gene=ydcY;gene_biotype=protein_coding;locus_tag=AB25_RS17195;old_locus_tag=AB25_1580 NZ_JJMC01000025.1 Protein Homology CDS 13125 13358 . + 0 ID=cds-WP_000018633.1;Parent=gene-AB25_RS17195;Dbxref=GenBank:WP_000018633.1;Name=WP_000018633.1;gbkey=CDS;gene=ydcY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310077.1;locus_tag=AB25_RS17195;product=DUF2526 family protein YdcY;protein_id=WP_000018633.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 13359 13808 . - . ID=gene-AB25_RS17190;Name=ydcZ;gbkey=Gene;gene=ydcZ;gene_biotype=protein_coding;locus_tag=AB25_RS17190;old_locus_tag=AB25_1581 NZ_JJMC01000025.1 Protein Homology CDS 13359 13808 . - 0 ID=cds-WP_001076535.1;Parent=gene-AB25_RS17190;Dbxref=GenBank:WP_001076535.1;Name=WP_001076535.1;Ontology_term=GO:0055085,GO:0005215,GO:0016020;gbkey=CDS;gene=ydcZ;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415964.1;locus_tag=AB25_RS17190;product=DMT family transporter;protein_id=WP_001076535.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 13805 14323 . - . ID=gene-AB25_RS17185;Name=mnaT;gbkey=Gene;gene=mnaT;gene_biotype=protein_coding;locus_tag=AB25_RS17185;old_locus_tag=AB25_1582 NZ_JJMC01000025.1 Protein Homology CDS 13805 14323 . - 0 ID=cds-WP_001296723.1;Parent=gene-AB25_RS17185;Dbxref=GenBank:WP_001296723.1;Name=WP_001296723.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;gene=mnaT;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310079.1;locus_tag=AB25_RS17185;product=GNAT family N-acetyltransferase;protein_id=WP_001296723.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 14504 15541 . + . ID=gene-AB25_RS17180;Name=curA;gbkey=Gene;gene=curA;gene_biotype=protein_coding;locus_tag=AB25_RS17180;old_locus_tag=AB25_1583 NZ_JJMC01000025.1 Protein Homology CDS 14504 15541 . + 0 ID=cds-WP_001349876.1;Parent=gene-AB25_RS17180;Dbxref=GenBank:WP_001349876.1;Name=WP_001349876.1;gbkey=CDS;gene=curA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415966.6;locus_tag=AB25_RS17180;product=NADPH-dependent curcumin/dihydrocurcumin reductase;protein_id=WP_001349876.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 15739 16404 . + . ID=gene-AB25_RS17175;Name=mcbR;gbkey=Gene;gene=mcbR;gene_biotype=protein_coding;locus_tag=AB25_RS17175;old_locus_tag=AB25_1584 NZ_JJMC01000025.1 Protein Homology CDS 15739 16404 . + 0 ID=cds-WP_001300742.1;Parent=gene-AB25_RS17175;Dbxref=GenBank:WP_001300742.1;Name=WP_001300742.1;gbkey=CDS;gene=mcbR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415967.2;locus_tag=AB25_RS17175;product=colanic acid/biofilm transcriptional regulator McbR;protein_id=WP_001300742.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 16440 18542 . - . ID=gene-AB25_RS17170;Name=pqqU;gbkey=Gene;gene=pqqU;gene_biotype=protein_coding;locus_tag=AB25_RS17170;old_locus_tag=AB25_1585 NZ_JJMC01000025.1 Protein Homology CDS 16440 18542 . - 0 ID=cds-WP_000689379.1;Parent=gene-AB25_RS17170;Dbxref=GenBank:WP_000689379.1;Name=WP_000689379.1;gbkey=CDS;gene=pqqU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415968.1;locus_tag=AB25_RS17170;product=TonB-dependent receptor PqqU;protein_id=WP_000689379.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 18784 19845 . + . ID=gene-AB25_RS17165;Name=yncE;gbkey=Gene;gene=yncE;gene_biotype=protein_coding;locus_tag=AB25_RS17165;old_locus_tag=AB25_1586 NZ_JJMC01000025.1 Protein Homology CDS 18784 19845 . + 0 ID=cds-WP_000550675.1;Parent=gene-AB25_RS17165;Dbxref=GenBank:WP_000550675.1;Name=WP_000550675.1;gbkey=CDS;gene=yncE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310083.1;locus_tag=AB25_RS17165;product=YncE family protein;protein_id=WP_000550675.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 19960 21459 . - . ID=gene-AB25_RS17160;Name=ansP;gbkey=Gene;gene=ansP;gene_biotype=protein_coding;locus_tag=AB25_RS17160;old_locus_tag=AB25_1588 NZ_JJMC01000025.1 Protein Homology CDS 19960 21459 . - 0 ID=cds-WP_001300590.1;Parent=gene-AB25_RS17160;Dbxref=GenBank:WP_001300590.1;Name=WP_001300590.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=ansP;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310084.2;locus_tag=AB25_RS17160;product=L-asparagine permease;protein_id=WP_001300590.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 21726 22343 . + . ID=gene-AB25_RS17155;Name=yncG;gbkey=Gene;gene=yncG;gene_biotype=protein_coding;locus_tag=AB25_RS17155;old_locus_tag=AB25_1590 NZ_JJMC01000025.1 Protein Homology CDS 21726 22343 . + 0 ID=cds-WP_000598869.1;Parent=gene-AB25_RS17155;Dbxref=GenBank:WP_000598869.1;Name=WP_000598869.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yncG;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415971.1;locus_tag=AB25_RS17155;product=glutathione S-transferase family protein;protein_id=WP_000598869.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 22419 22631 . + . ID=gene-AB25_RS17150;Name=yncH;gbkey=Gene;gene=yncH;gene_biotype=protein_coding;locus_tag=AB25_RS17150;old_locus_tag=AB25_1591 NZ_JJMC01000025.1 Protein Homology CDS 22419 22631 . + 0 ID=cds-WP_000882235.1;Parent=gene-AB25_RS17150;Dbxref=GenBank:WP_000882235.1;Name=WP_000882235.1;gbkey=CDS;gene=yncH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310086.1;locus_tag=AB25_RS17150;product=YncH family protein;protein_id=WP_000882235.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 23452 25560 . + . ID=gene-AB25_RS17145;Name=AB25_RS17145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS17145;old_locus_tag=AB25_1592 NZ_JJMC01000025.1 Protein Homology CDS 23452 25560 . + 0 ID=cds-WP_000103418.1;Parent=gene-AB25_RS17145;Dbxref=GenBank:WP_000103418.1;Name=WP_000103418.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310087.1;locus_tag=AB25_RS17145;product=type VI secretion system tip protein VgrG;protein_id=WP_000103418.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 25628 29848 . + . ID=gene-AB25_RS17140;Name=AB25_RS17140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS17140;old_locus_tag=AB25_1593 NZ_JJMC01000025.1 Protein Homology CDS 25628 29848 . + 0 ID=cds-WP_032295932.1;Parent=gene-AB25_RS17140;Dbxref=GenBank:WP_032295932.1;Name=WP_032295932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238907.1;locus_tag=AB25_RS17140;product=RHS element core protein;protein_id=WP_032295932.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 29849 30247 . + . ID=gene-AB25_RS0125060;Name=AB25_RS0125060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0125060 NZ_JJMC01000025.1 Protein Homology CDS 29849 30247 . + 0 ID=cds-WP_000425544.1;Parent=gene-AB25_RS0125060;Dbxref=GenBank:WP_000425544.1;Name=WP_000425544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000425544.1;locus_tag=AB25_RS0125060;product=hypothetical protein;protein_id=WP_000425544.1;transl_table=11 NZ_JJMC01000025.1 RefSeq pseudogene 30290 30865 . + . ID=gene-AB25_RS32950;Name=AB25_RS32950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32950;partial=true;pseudo=true;start_range=.,30290 NZ_JJMC01000025.1 Protein Homology CDS 30290 30865 . + 0 ID=cds-AB25_RS32950;Parent=gene-AB25_RS32950;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001691177.1;locus_tag=AB25_RS32950;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,30290;transl_table=11 NZ_JJMC01000025.1 RefSeq pseudogene 30892 31235 . + . ID=gene-AB25_RS32810;Name=AB25_RS32810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32810;pseudo=true NZ_JJMC01000025.1 Protein Homology CDS 30892 31235 . + 0 ID=cds-AB25_RS32810;Parent=gene-AB25_RS32810;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001279013.1;locus_tag=AB25_RS32810;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJMC01000025.1 RefSeq pseudogene 31639 32412 . + . ID=gene-AB25_RS17135;Name=AB25_RS17135;end_range=32412,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS17135;old_locus_tag=AB25_1596;partial=true;pseudo=true NZ_JJMC01000025.1 Protein Homology CDS 31639 32412 . + 0 ID=cds-AB25_RS17135;Parent=gene-AB25_RS17135;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=32412,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AB25_RS17135;partial=true;product=ISAs1 family transposase;pseudo=true;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 32463 32690 . + . ID=gene-AB25_RS17130;Name=pptA;gbkey=Gene;gene=pptA;gene_biotype=protein_coding;locus_tag=AB25_RS17130;old_locus_tag=AB25_1597 NZ_JJMC01000025.1 Protein Homology CDS 32463 32690 . + 0 ID=cds-WP_001120141.1;Parent=gene-AB25_RS17130;Dbxref=GenBank:WP_001120141.1;Name=WP_001120141.1;gbkey=CDS;gene=pptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310091.1;locus_tag=AB25_RS17130;product=tautomerase PptA;protein_id=WP_001120141.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 32694 33263 . - . ID=gene-AB25_RS17125;Name=yddH;gbkey=Gene;gene=yddH;gene_biotype=protein_coding;locus_tag=AB25_RS17125;old_locus_tag=AB25_1598 NZ_JJMC01000025.1 Protein Homology CDS 32694 33263 . - 0 ID=cds-WP_000085912.1;Parent=gene-AB25_RS17125;Dbxref=GenBank:WP_000085912.1;Name=WP_000085912.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;gene=yddH;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415979.2;locus_tag=AB25_RS17125;product=flavin reductase family protein;protein_id=WP_000085912.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 33436 34281 . + . ID=gene-AB25_RS17120;Name=nhoA;gbkey=Gene;gene=nhoA;gene_biotype=protein_coding;locus_tag=AB25_RS17120;old_locus_tag=AB25_1599 NZ_JJMC01000025.1 Protein Homology CDS 33436 34281 . + 0 ID=cds-WP_000187896.1;Parent=gene-AB25_RS17120;Dbxref=GenBank:WP_000187896.1;Name=WP_000187896.1;Ontology_term=GO:0016407;gbkey=CDS;gene=nhoA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415980.1;locus_tag=AB25_RS17120;product=N-hydroxyarylamine O-acetyltransferase;protein_id=WP_000187896.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 34377 35270 . - . ID=gene-AB25_RS17115;Name=yddE;gbkey=Gene;gene=yddE;gene_biotype=protein_coding;locus_tag=AB25_RS17115;old_locus_tag=AB25_1600 NZ_JJMC01000025.1 Protein Homology CDS 34377 35270 . - 0 ID=cds-WP_000804379.1;Parent=gene-AB25_RS17115;Dbxref=GenBank:WP_000804379.1;Name=WP_000804379.1;Ontology_term=GO:0009058,GO:0003824;gbkey=CDS;gene=yddE;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310094.1;locus_tag=AB25_RS17115;product=PhzF family isomerase;protein_id=WP_000804379.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 35349 36029 . - . ID=gene-AB25_RS17110;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=AB25_RS17110;old_locus_tag=AB25_1601 NZ_JJMC01000025.1 Protein Homology CDS 35349 36029 . - 0 ID=cds-WP_000617115.1;Parent=gene-AB25_RS17110;Dbxref=GenBank:WP_000617115.1;Name=WP_000617115.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310095.1;locus_tag=AB25_RS17110;product=respiratory nitrate reductase subunit gamma;protein_id=WP_000617115.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 36026 36721 . - . ID=gene-AB25_RS17105;Name=narW;gbkey=Gene;gene=narW;gene_biotype=protein_coding;locus_tag=AB25_RS17105;old_locus_tag=AB25_1602 NZ_JJMC01000025.1 Protein Homology CDS 36026 36721 . - 0 ID=cds-WP_001166353.1;Parent=gene-AB25_RS17105;Dbxref=GenBank:WP_001166353.1;Name=WP_001166353.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narW;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415983.1;locus_tag=AB25_RS17105;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_001166353.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 36721 38265 . - . ID=gene-AB25_RS17100;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=AB25_RS17100;old_locus_tag=AB25_1603 NZ_JJMC01000025.1 Protein Homology CDS 36721 38265 . - 0 ID=cds-WP_000702560.1;Parent=gene-AB25_RS17100;Dbxref=GenBank:WP_000702560.1;Name=WP_000702560.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310097.1;locus_tag=AB25_RS17100;product=nitrate reductase subunit beta;protein_id=WP_000702560.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 38262 42002 . - . ID=gene-AB25_RS17095;Name=narZ;gbkey=Gene;gene=narZ;gene_biotype=protein_coding;locus_tag=AB25_RS17095;old_locus_tag=AB25_1604 NZ_JJMC01000025.1 Protein Homology CDS 38262 42002 . - 0 ID=cds-WP_000040458.1;Parent=gene-AB25_RS17095;Dbxref=GenBank:WP_000040458.1;Name=WP_000040458.1;gbkey=CDS;gene=narZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415985.1;locus_tag=AB25_RS17095;product=nitrate reductase Z subunit alpha;protein_id=WP_000040458.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 42084 43472 . - . ID=gene-AB25_RS17090;Name=narU;gbkey=Gene;gene=narU;gene_biotype=protein_coding;locus_tag=AB25_RS17090;old_locus_tag=AB25_1605 NZ_JJMC01000025.1 Protein Homology CDS 42084 43472 . - 0 ID=cds-WP_001207905.1;Parent=gene-AB25_RS17090;Dbxref=GenBank:WP_001207905.1;Name=WP_001207905.1;gbkey=CDS;gene=narU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415986.1;locus_tag=AB25_RS17090;product=nitrate/nitrite transporter NarU;protein_id=WP_001207905.1;transl_table=11 NZ_JJMC01000025.1 RefSeq pseudogene 43796 45126 . - . ID=gene-AB25_RS0125070;Name=AB25_RS0125070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS0125070;old_locus_tag=AB25_1606;pseudo=true NZ_JJMC01000025.1 Protein Homology CDS 43796 45126 . - 0 ID=cds-AB25_RS0125070;Parent=gene-AB25_RS0125070;Note=frameshifted;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627100.1;locus_tag=AB25_RS0125070;product=leucine-rich repeat domain-containing protein;pseudo=true;transl_table=11 NZ_JJMC01000025.1 RefSeq pseudogene 45165 45440 . - . ID=gene-AB25_RS17085;Name=yddL;gbkey=Gene;gene=yddL;gene_biotype=pseudogene;locus_tag=AB25_RS17085;old_locus_tag=AB25_1607;partial=true;pseudo=true;start_range=.,45165 NZ_JJMC01000025.1 Protein Homology CDS 45165 45440 . - 0 ID=cds-AB25_RS17085;Parent=gene-AB25_RS17085;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0034220,GO:0015288,GO:0009279,GO:0016020;gbkey=CDS;gene=yddL;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310103.1;locus_tag=AB25_RS17085;partial=true;product=porin;pseudo=true;start_range=.,45165;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 45699 46580 . - . ID=gene-AB25_RS17080;Name=yddG;gbkey=Gene;gene=yddG;gene_biotype=protein_coding;locus_tag=AB25_RS17080;old_locus_tag=AB25_1608 NZ_JJMC01000025.1 Protein Homology CDS 45699 46580 . - 0 ID=cds-WP_000198210.1;Parent=gene-AB25_RS17080;Dbxref=GenBank:WP_000198210.1;Name=WP_000198210.1;gbkey=CDS;gene=yddG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707617.1;locus_tag=AB25_RS17080;product=aromatic amino acid efflux DMT transporter YddG;protein_id=WP_000198210.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 46812 49859 . + . ID=gene-AB25_RS17070;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=AB25_RS17070;old_locus_tag=AB25_1610 NZ_JJMC01000025.1 Protein Homology CDS 46812 49859 . + 0 ID=cds-WP_014639908.1;Parent=gene-AB25_RS17070;Dbxref=GenBank:WP_014639908.1;Name=WP_014639908.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415991.1;locus_tag=AB25_RS17070;product=formate dehydrogenase-N subunit alpha;protein_id=WP_014639908.1;transl_except=(pos:47397..47399%2Caa:Sec);transl_table=11 NZ_JJMC01000025.1 RefSeq gene 49872 50756 . + . ID=gene-AB25_RS17065;Name=fdnH;gbkey=Gene;gene=fdnH;gene_biotype=protein_coding;locus_tag=AB25_RS17065;old_locus_tag=AB25_1611 NZ_JJMC01000025.1 Protein Homology CDS 49872 50756 . + 0 ID=cds-WP_001240582.1;Parent=gene-AB25_RS17065;Dbxref=GenBank:WP_001240582.1;Name=WP_001240582.1;gbkey=CDS;gene=fdnH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415992.1;locus_tag=AB25_RS17065;product=formate dehydrogenase N subunit beta;protein_id=WP_001240582.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 50749 51402 . + . ID=gene-AB25_RS17060;Name=fdnI;gbkey=Gene;gene=fdnI;gene_biotype=protein_coding;locus_tag=AB25_RS17060;old_locus_tag=AB25_1612 NZ_JJMC01000025.1 Protein Homology CDS 50749 51402 . + 0 ID=cds-WP_000045648.1;Parent=gene-AB25_RS17060;Dbxref=GenBank:WP_000045648.1;Name=WP_000045648.1;gbkey=CDS;gene=fdnI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310107.1;locus_tag=AB25_RS17060;product=formate dehydrogenase-N subunit gamma;protein_id=WP_000045648.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 51987 52271 . - . ID=gene-AB25_RS17055;Name=yddM;gbkey=Gene;gene=yddM;gene_biotype=protein_coding;locus_tag=AB25_RS17055;old_locus_tag=AB25_1613 NZ_JJMC01000025.1 Protein Homology CDS 51987 52271 . - 0 ID=cds-WP_000781370.1;Parent=gene-AB25_RS17055;Dbxref=GenBank:WP_000781370.1;Name=WP_000781370.1;Ontology_term=GO:0003677;gbkey=CDS;gene=yddM;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415994.4;locus_tag=AB25_RS17055;product=HigA family addiction module antitoxin;protein_id=WP_000781370.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 52417 53427 . - . ID=gene-AB25_RS17050;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=AB25_RS17050;old_locus_tag=AB25_1614 NZ_JJMC01000025.1 Protein Homology CDS 52417 53427 . - 0 ID=cds-WP_000642403.1;Parent=gene-AB25_RS17050;Dbxref=GenBank:WP_000642403.1;Name=WP_000642403.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415995.4;locus_tag=AB25_RS17050;product=alcohol dehydrogenase AdhP;protein_id=WP_000642403.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 53561 55258 . - . ID=gene-AB25_RS17045;Name=maeA;gbkey=Gene;gene=maeA;gene_biotype=protein_coding;locus_tag=AB25_RS17045;old_locus_tag=AB25_1615 NZ_JJMC01000025.1 Protein Homology CDS 53561 55258 . - 0 ID=cds-WP_032171374.1;Parent=gene-AB25_RS17045;Dbxref=GenBank:WP_032171374.1;Name=WP_032171374.1;gbkey=CDS;gene=maeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707611.2;locus_tag=AB25_RS17045;product=malate dehydrogenase;protein_id=WP_032171374.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 55415 55552 . - . ID=gene-AB25_RS17040;Name=sra;gbkey=Gene;gene=sra;gene_biotype=protein_coding;locus_tag=AB25_RS17040;old_locus_tag=AB25_1616 NZ_JJMC01000025.1 Protein Homology CDS 55415 55552 . - 0 ID=cds-WP_000841554.1;Parent=gene-AB25_RS17040;Dbxref=GenBank:WP_000841554.1;Name=WP_000841554.1;gbkey=CDS;gene=sra;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310111.1;locus_tag=AB25_RS17040;product=stationary-phase-induced ribosome-associated protein;protein_id=WP_000841554.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 55654 55869 . - . ID=gene-AB25_RS17035;Name=bdm;gbkey=Gene;gene=bdm;gene_biotype=protein_coding;locus_tag=AB25_RS17035;old_locus_tag=AB25_1617 NZ_JJMC01000025.1 Protein Homology CDS 55654 55869 . - 0 ID=cds-WP_000495771.1;Parent=gene-AB25_RS17035;Dbxref=GenBank:WP_000495771.1;Name=WP_000495771.1;gbkey=CDS;gene=bdm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415998.4;locus_tag=AB25_RS17035;product=biofilm-dependent modulation protein;protein_id=WP_000495771.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 56214 56645 . + . ID=gene-AB25_RS17030;Name=osmC;gbkey=Gene;gene=osmC;gene_biotype=protein_coding;locus_tag=AB25_RS17030;old_locus_tag=AB25_1618 NZ_JJMC01000025.1 Protein Homology CDS 56214 56645 . + 0 ID=cds-WP_000152305.1;Parent=gene-AB25_RS17030;Dbxref=GenBank:WP_000152305.1;Name=WP_000152305.1;gbkey=CDS;gene=osmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415999.1;locus_tag=AB25_RS17030;product=peroxiredoxin OsmC;protein_id=WP_000152305.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 56701 57627 . - . ID=gene-AB25_RS17025;Name=ddpF;gbkey=Gene;gene=ddpF;gene_biotype=protein_coding;locus_tag=AB25_RS17025;old_locus_tag=AB25_1619 NZ_JJMC01000025.1 Protein Homology CDS 56701 57627 . - 0 ID=cds-WP_001285559.1;Parent=gene-AB25_RS17025;Dbxref=GenBank:WP_001285559.1;Name=WP_001285559.1;Ontology_term=GO:0015833,GO:0005524,GO:0015440,GO:0009898,GO:0043190;gbkey=CDS;gene=ddpF;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type peptide transporter activity|0015440||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416000.1;locus_tag=AB25_RS17025;product=oligopeptide/dipeptide ABC transporter ATP-binding protein;protein_id=WP_001285559.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 57620 58606 . - . ID=gene-AB25_RS17020;Name=ddpD;gbkey=Gene;gene=ddpD;gene_biotype=protein_coding;locus_tag=AB25_RS17020;old_locus_tag=AB25_1620 NZ_JJMC01000025.1 Protein Homology CDS 57620 58606 . - 0 ID=cds-WP_000193507.1;Parent=gene-AB25_RS17020;Dbxref=GenBank:WP_000193507.1;Name=WP_000193507.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=ddpD;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416001.1;locus_tag=AB25_RS17020;product=ABC transporter ATP-binding protein;protein_id=WP_000193507.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 58603 59499 . - . ID=gene-AB25_RS17015;Name=ddpC;gbkey=Gene;gene=ddpC;gene_biotype=protein_coding;locus_tag=AB25_RS17015;old_locus_tag=AB25_1621 NZ_JJMC01000025.1 Protein Homology CDS 58603 59499 . - 0 ID=cds-WP_000979608.1;Parent=gene-AB25_RS17015;Dbxref=GenBank:WP_000979608.1;Name=WP_000979608.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=ddpC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310116.1;locus_tag=AB25_RS17015;product=D%2CD-dipeptide ABC transporter permease;protein_id=WP_000979608.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 59496 60518 . - . ID=gene-AB25_RS17010;Name=ddpB;gbkey=Gene;gene=ddpB;gene_biotype=protein_coding;locus_tag=AB25_RS17010;old_locus_tag=AB25_1622 NZ_JJMC01000025.1 Protein Homology CDS 59496 60518 . - 0 ID=cds-WP_000145096.1;Parent=gene-AB25_RS17010;Dbxref=GenBank:WP_000145096.1;Name=WP_000145096.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ddpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416003.1;locus_tag=AB25_RS17010;product=ABC transporter permease;protein_id=WP_000145096.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 60520 62070 . - . ID=gene-AB25_RS17005;Name=ddpA;gbkey=Gene;gene=ddpA;gene_biotype=protein_coding;locus_tag=AB25_RS17005;old_locus_tag=AB25_1623 NZ_JJMC01000025.1 Protein Homology CDS 60520 62070 . - 0 ID=cds-WP_000830574.1;Parent=gene-AB25_RS17005;Dbxref=GenBank:WP_000830574.1;Name=WP_000830574.1;Ontology_term=GO:0005524,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;gene=ddpA;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310118.1;locus_tag=AB25_RS17005;product=ABC transporter substrate-binding protein;protein_id=WP_000830574.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 62084 62665 . - . ID=gene-AB25_RS17000;Name=ddpX;gbkey=Gene;gene=ddpX;gene_biotype=protein_coding;locus_tag=AB25_RS17000;old_locus_tag=AB25_1624 NZ_JJMC01000025.1 Protein Homology CDS 62084 62665 . - 0 ID=cds-WP_001285846.1;Parent=gene-AB25_RS17000;Dbxref=GenBank:WP_001285846.1;Name=WP_001285846.1;Ontology_term=GO:0006508,GO:0016805;gbkey=CDS;gene=ddpX;go_function=dipeptidase activity|0016805||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310119.1;locus_tag=AB25_RS17000;product=D-alanyl-D-alanine dipeptidase;protein_id=WP_001285846.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 62923 65322 . - . ID=gene-AB25_RS16995;Name=dosP;gbkey=Gene;gene=dosP;gene_biotype=protein_coding;gene_synonym=pdeO;locus_tag=AB25_RS16995;old_locus_tag=AB25_1625 NZ_JJMC01000025.1 Protein Homology CDS 62923 65322 . - 0 ID=cds-WP_001604421.1;Parent=gene-AB25_RS16995;Dbxref=GenBank:WP_001604421.1;Name=WP_001604421.1;gbkey=CDS;gene=dosP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416006.4;locus_tag=AB25_RS16995;product=oxygen-sensing cyclic-di-GMP phosphodiesterase DosP;protein_id=WP_001604421.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 65347 66729 . - . ID=gene-AB25_RS16990;Name=dosC;gbkey=Gene;gene=dosC;gene_biotype=protein_coding;locus_tag=AB25_RS16990;old_locus_tag=AB25_1626 NZ_JJMC01000025.1 Protein Homology CDS 65347 66729 . - 0 ID=cds-WP_000426272.1;Parent=gene-AB25_RS16990;Dbxref=GenBank:WP_000426272.1;Name=WP_000426272.1;gbkey=CDS;gene=dosC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310122.1;locus_tag=AB25_RS16990;product=diguanylate cyclase DosC;protein_id=WP_000426272.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 67106 68425 . - . ID=gene-AB25_RS16985;Name=digH;gbkey=Gene;gene=digH;gene_biotype=protein_coding;locus_tag=AB25_RS16985;old_locus_tag=AB25_1627 NZ_JJMC01000025.1 Protein Homology CDS 67106 68425 . - 0 ID=cds-WP_024172085.1;Parent=gene-AB25_RS16985;Dbxref=GenBank:WP_024172085.1;Name=WP_024172085.1;gbkey=CDS;gene=digH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310123.1;locus_tag=AB25_RS16985;product=family 10 glycosylhydrolase;protein_id=WP_024172085.1;transl_table=11 NZ_JJMC01000025.1 RefSeq gene 68556 70091 . - . ID=gene-AB25_RS16980;Name=gadC;gbkey=Gene;gene=gadC;gene_biotype=protein_coding;locus_tag=AB25_RS16980;old_locus_tag=AB25_1628 NZ_JJMC01000025.1 Protein Homology CDS 68556 70091 . - 0 ID=cds-WP_000246019.1;Parent=gene-AB25_RS16980;Dbxref=GenBank:WP_000246019.1;Name=WP_000246019.1;gbkey=CDS;gene=gadC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416009.1;locus_tag=AB25_RS16980;product=acid resistance gamma-aminobutyrate antiporter GadC;protein_id=WP_000246019.1;transl_table=11 NZ_JJMC01000025.1 RefSeq pseudogene 70247 70593 . - . ID=gene-AB25_RS16975;Name=AB25_RS16975;end_range=70593,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS16975;old_locus_tag=AB25_1629;partial=true;pseudo=true NZ_JJMC01000025.1 Protein Homology CDS 70247 70593 . - 2 ID=cds-AB25_RS16975;Parent=gene-AB25_RS16975;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=70593,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310125.1;locus_tag=AB25_RS16975;partial=true;product=glutamate decarboxylase;pseudo=true;transl_table=11 ##sequence-region NZ_JJMC01000026.1 1 12514 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000026.1 RefSeq region 1 12514 . + . ID=NZ_JJMC01000026.1:1..12514;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000026.1 RefSeq pseudogene 1 698 . - . ID=gene-AB25_RS30225;Name=AB25_RS30225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS30225;old_locus_tag=AB25_1631;partial=true;pseudo=true;start_range=.,1 NZ_JJMC01000026.1 Protein Homology CDS 1 698 . - 0 ID=cds-AB25_RS30225;Parent=gene-AB25_RS30225;Note=internal stop%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AB25_RS30225;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJMC01000026.1 RefSeq pseudogene 754 836 . - . ID=gene-AB25_RS32955;Name=AB25_RS32955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32955;partial=true;pseudo=true;start_range=.,754 NZ_JJMC01000026.1 Protein Homology CDS 754 836 . - 0 ID=cds-AB25_RS32955;Parent=gene-AB25_RS32955;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000406625.1;locus_tag=AB25_RS32955;partial=true;product=CPBP family intramembrane glutamic endopeptidase;pseudo=true;start_range=.,754;transl_table=11 NZ_JJMC01000026.1 RefSeq gene 936 1394 . - . ID=gene-AB25_RS16970;Name=AB25_RS16970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS16970;old_locus_tag=AB25_1632 NZ_JJMC01000026.1 Protein Homology CDS 936 1394 . - 0 ID=cds-WP_001301456.1;Parent=gene-AB25_RS16970;Dbxref=GenBank:WP_001301456.1;Name=WP_001301456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309401.1;locus_tag=AB25_RS16970;product=hypothetical protein;protein_id=WP_001301456.1;transl_table=11 NZ_JJMC01000026.1 RefSeq gene 1852 2361 . + . ID=gene-AB25_RS30230;Name=AB25_RS30230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS30230 NZ_JJMC01000026.1 Protein Homology CDS 1852 2361 . + 0 ID=cds-WP_001167434.1;Parent=gene-AB25_RS30230;Dbxref=GenBank:WP_001167434.1;Name=WP_001167434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309403.1;locus_tag=AB25_RS30230;product=hypothetical protein;protein_id=WP_001167434.1;transl_table=11 NZ_JJMC01000026.1 RefSeq gene 2450 3073 . + . ID=gene-AB25_RS16965;Name=AB25_RS16965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS16965;old_locus_tag=AB25_1635 NZ_JJMC01000026.1 Protein Homology CDS 2450 3073 . + 0 ID=cds-WP_001260386.1;Parent=gene-AB25_RS16965;Dbxref=GenBank:WP_001260386.1;Name=WP_001260386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309404.1;locus_tag=AB25_RS16965;product=hypothetical protein;protein_id=WP_001260386.1;transl_table=11 NZ_JJMC01000026.1 RefSeq gene 3169 3402 . + . ID=gene-AB25_RS16960;Name=AB25_RS16960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS16960;old_locus_tag=AB25_1636 NZ_JJMC01000026.1 Protein Homology CDS 3169 3402 . + 0 ID=cds-WP_000124179.1;Parent=gene-AB25_RS16960;Dbxref=GenBank:WP_000124179.1;Name=WP_000124179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309405.1;locus_tag=AB25_RS16960;product=hypothetical protein;protein_id=WP_000124179.1;transl_table=11 NZ_JJMC01000026.1 RefSeq gene 3455 3646 . - . ID=gene-AB25_RS16955;Name=AB25_RS16955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS16955;old_locus_tag=AB25_1637 NZ_JJMC01000026.1 Protein Homology CDS 3455 3646 . - 0 ID=cds-WP_001287881.1;Parent=gene-AB25_RS16955;Dbxref=GenBank:WP_001287881.1;Name=WP_001287881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502604.1;locus_tag=AB25_RS16955;product=DUF4222 domain-containing protein;protein_id=WP_001287881.1;transl_table=11 NZ_JJMC01000026.1 RefSeq gene 4068 4217 . + . ID=gene-AB25_RS31975;Name=AB25_RS31975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31975;old_locus_tag=AB25_1639 NZ_JJMC01000026.1 Protein Homology CDS 4068 4217 . + 0 ID=cds-WP_000590537.1;Parent=gene-AB25_RS31975;Dbxref=GenBank:WP_000590537.1;Name=WP_000590537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000590537.1;locus_tag=AB25_RS31975;product=hypothetical protein;protein_id=WP_000590537.1;transl_table=11 NZ_JJMC01000026.1 RefSeq gene 4321 5367 . + . ID=gene-AB25_RS16950;Name=AB25_RS16950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS16950;old_locus_tag=AB25_1640 NZ_JJMC01000026.1 Protein Homology CDS 4321 5367 . + 0 ID=cds-WP_001335711.1;Parent=gene-AB25_RS16950;Dbxref=GenBank:WP_001335711.1;Name=WP_001335711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309409.2;locus_tag=AB25_RS16950;product=POTRA domain-containing protein;protein_id=WP_001335711.1;transl_table=11 NZ_JJMC01000026.1 RefSeq gene 5608 8289 . + . ID=gene-AB25_RS16945;Name=AB25_RS16945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS16945;old_locus_tag=AB25_1641 NZ_JJMC01000026.1 Protein Homology CDS 5608 8289 . + 0 ID=cds-WP_187439312.1;Parent=gene-AB25_RS16945;Dbxref=GenBank:WP_187439312.1;Name=WP_187439312.1;Ontology_term=GO:0004386;gbkey=CDS;go_function=helicase activity|0004386||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536548.1;locus_tag=AB25_RS16945;product=AAA domain-containing protein;protein_id=WP_187439312.1;transl_table=11 NZ_JJMC01000026.1 RefSeq gene 8790 10022 . + . ID=gene-AB25_RS16940;Name=AB25_RS16940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS16940;old_locus_tag=AB25_1643 NZ_JJMC01000026.1 Protein Homology CDS 8790 10022 . + 0 ID=cds-WP_001285507.1;Parent=gene-AB25_RS16940;Dbxref=GenBank:WP_001285507.1;Name=WP_001285507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309413.1;locus_tag=AB25_RS16940;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_001285507.1;transl_table=11 NZ_JJMC01000026.1 RefSeq gene 10007 10645 . + . ID=gene-AB25_RS16935;Name=AB25_RS16935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS16935;old_locus_tag=AB25_1644 NZ_JJMC01000026.1 Protein Homology CDS 10007 10645 . + 0 ID=cds-WP_000502842.1;Parent=gene-AB25_RS16935;Dbxref=GenBank:WP_000502842.1;Name=WP_000502842.1;Ontology_term=GO:0071453,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cellular response to oxygen levels|0071453||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309414.1;locus_tag=AB25_RS16935;product=IbrB-like domain-containing protein;protein_id=WP_000502842.1;transl_table=11 NZ_JJMC01000026.1 RefSeq gene 10724 10993 . + . ID=gene-AB25_RS16930;Name=AB25_RS16930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS16930;old_locus_tag=AB25_1645 NZ_JJMC01000026.1 Protein Homology CDS 10724 10993 . + 0 ID=cds-WP_000226519.1;Parent=gene-AB25_RS16930;Dbxref=GenBank:WP_000226519.1;Name=WP_000226519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309415.1;locus_tag=AB25_RS16930;product=PerC family transcriptional regulator;protein_id=WP_000226519.1;transl_table=11 NZ_JJMC01000026.1 RefSeq gene 11014 11658 . + . ID=gene-AB25_RS16925;Name=AB25_RS16925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS16925;old_locus_tag=AB25_1646 NZ_JJMC01000026.1 Protein Homology CDS 11014 11658 . + 0 ID=cds-WP_001333354.1;Parent=gene-AB25_RS16925;Dbxref=GenBank:WP_001333354.1;Name=WP_001333354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309416.1;locus_tag=AB25_RS16925;product=hypothetical protein;protein_id=WP_001333354.1;transl_table=11 NZ_JJMC01000026.1 RefSeq pseudogene 11974 12313 . + . ID=gene-AB25_RS16920;Name=AB25_RS16920;end_range=12313,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS16920;old_locus_tag=AB25_1647;partial=true;pseudo=true NZ_JJMC01000026.1 Protein Homology CDS 11974 12313 . + 0 ID=cds-AB25_RS16920;Parent=gene-AB25_RS16920;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=12313,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001347735.1;locus_tag=AB25_RS16920;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_JJMC01000026.1 RefSeq pseudogene 12356 12514 . - . ID=gene-AB25_RS31090;Name=AB25_RS31090;end_range=12514,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS31090;old_locus_tag=AB25_1648;partial=true;pseudo=true NZ_JJMC01000026.1 Protein Homology CDS 12356 12514 . - 0 ID=cds-AB25_RS31090;Parent=gene-AB25_RS31090;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=12514,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AB25_RS31090;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJMC01000027.1 1 303637 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000027.1 RefSeq region 1 303637 . + . ID=NZ_JJMC01000027.1:1..303637;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000027.1 RefSeq gene 1 603 . - . ID=gene-AB25_RS16910;Name=AB25_RS16910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS16910;old_locus_tag=AB25_1649;partial=true;start_range=.,1 NZ_JJMC01000027.1 Protein Homology CDS 1 603 . - 0 ID=cds-WP_032295939.1;Parent=gene-AB25_RS16910;Dbxref=GenBank:WP_032295939.1;Name=WP_032295939.1;Ontology_term=GO:0019752,GO:0016830,GO:0030170;gbkey=CDS;go_function=carbon-carbon lyase activity|0016830||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310125.1;locus_tag=AB25_RS16910;partial=true;product=pyridoxal-dependent decarboxylase;protein_id=WP_032295939.1;start_range=.,1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 965 3748 . - . ID=gene-AB25_RS16905;Name=pqqL;gbkey=Gene;gene=pqqL;gene_biotype=protein_coding;locus_tag=AB25_RS16905;old_locus_tag=AB25_1651 NZ_JJMC01000027.1 Protein Homology CDS 965 3748 . - 0 ID=cds-WP_001244983.1;Parent=gene-AB25_RS16905;Dbxref=GenBank:WP_001244983.1;Name=WP_001244983.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;gene=pqqL;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310126.2;locus_tag=AB25_RS16905;product=M16 family metallopeptidase;protein_id=WP_001244983.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 3805 6177 . - . ID=gene-AB25_RS16900;Name=yddB;gbkey=Gene;gene=yddB;gene_biotype=protein_coding;locus_tag=AB25_RS16900;old_locus_tag=AB25_1652 NZ_JJMC01000027.1 Protein Homology CDS 3805 6177 . - 0 ID=cds-WP_000832431.1;Parent=gene-AB25_RS16900;Dbxref=GenBank:WP_000832431.1;Name=WP_000832431.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267,GO:0009279,GO:0016020;gbkey=CDS;gene=yddB;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=channel activity|0015267||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416012.1;locus_tag=AB25_RS16900;product=TonB-dependent receptor plug domain-containing protein;protein_id=WP_000832431.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 6215 7900 . - . ID=gene-AB25_RS16895;Name=yddA;gbkey=Gene;gene=yddA;gene_biotype=protein_coding;locus_tag=AB25_RS16895;old_locus_tag=AB25_1653 NZ_JJMC01000027.1 Protein Homology CDS 6215 7900 . - 0 ID=cds-WP_032170709.1;Parent=gene-AB25_RS16895;Dbxref=GenBank:WP_032170709.1;Name=WP_032170709.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=yddA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416013.1;locus_tag=AB25_RS16895;product=ABC transporter ATP-binding protein/permease;protein_id=WP_032170709.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 8103 8225 . + . ID=gene-AB25_RS31695;Name=AB25_RS31695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31695 NZ_JJMC01000027.1 Protein Homology CDS 8103 8225 . + 0 ID=cds-WP_122633168.1;Parent=gene-AB25_RS31695;Dbxref=GenBank:WP_122633168.1;Name=WP_122633168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518784.1;locus_tag=AB25_RS31695;product=hypothetical protein;protein_id=WP_122633168.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 8191 9348 . - . ID=gene-AB25_RS16890;Name=ydeM;gbkey=Gene;gene=ydeM;gene_biotype=protein_coding;locus_tag=AB25_RS16890;old_locus_tag=AB25_1654 NZ_JJMC01000027.1 Protein Homology CDS 8191 9348 . - 0 ID=cds-WP_029403162.1;Parent=gene-AB25_RS16890;Dbxref=GenBank:WP_029403162.1;Name=WP_029403162.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;gene=ydeM;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416014.4;locus_tag=AB25_RS16890;product=anaerobic sulfatase maturase;protein_id=WP_029403162.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 9400 11082 . - . ID=gene-AB25_RS16885;Name=ydeN;gbkey=Gene;gene=ydeN;gene_biotype=protein_coding;locus_tag=AB25_RS16885;old_locus_tag=AB25_1655 NZ_JJMC01000027.1 Protein Homology CDS 9400 11082 . - 0 ID=cds-WP_001295684.1;Parent=gene-AB25_RS16885;Dbxref=GenBank:WP_001295684.1;Name=WP_001295684.1;Ontology_term=GO:0008484;gbkey=CDS;gene=ydeN;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416015.2;locus_tag=AB25_RS16885;product=sulfatase-like hydrolase/transferase;protein_id=WP_001295684.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 11484 12245 . - . ID=gene-AB25_RS16880;Name=ydeO;gbkey=Gene;gene=ydeO;gene_biotype=protein_coding;locus_tag=AB25_RS16880;old_locus_tag=AB25_1656 NZ_JJMC01000027.1 Protein Homology CDS 11484 12245 . - 0 ID=cds-WP_000060479.1;Parent=gene-AB25_RS16880;Dbxref=GenBank:WP_000060479.1;Name=WP_000060479.1;gbkey=CDS;gene=ydeO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707419.1;locus_tag=AB25_RS16880;product=acid stress response transcriptional regulator YdeO;protein_id=WP_000060479.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 12320 12517 . - . ID=gene-AB25_RS16875;Name=safA;gbkey=Gene;gene=safA;gene_biotype=protein_coding;locus_tag=AB25_RS16875;old_locus_tag=AB25_1657 NZ_JJMC01000027.1 Protein Homology CDS 12320 12517 . - 0 ID=cds-WP_000543389.1;Parent=gene-AB25_RS16875;Dbxref=GenBank:WP_000543389.1;Name=WP_000543389.1;gbkey=CDS;gene=safA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310132.1;locus_tag=AB25_RS16875;product=two-component system connector SafA;protein_id=WP_000543389.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 12765 15044 . - . ID=gene-AB25_RS16870;Name=ydeP;gbkey=Gene;gene=ydeP;gene_biotype=protein_coding;locus_tag=AB25_RS16870;old_locus_tag=AB25_1658 NZ_JJMC01000027.1 Protein Homology CDS 12765 15044 . - 0 ID=cds-WP_000726689.1;Parent=gene-AB25_RS16870;Dbxref=GenBank:WP_000726689.1;Name=WP_000726689.1;gbkey=CDS;gene=ydeP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416018.1;locus_tag=AB25_RS16870;product=acid resistance putative oxidoreductase YdeP;protein_id=WP_000726689.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 15378 16292 . - . ID=gene-AB25_RS16865;Name=ydeQ;gbkey=Gene;gene=ydeQ;gene_biotype=protein_coding;locus_tag=AB25_RS16865;old_locus_tag=AB25_1659 NZ_JJMC01000027.1 Protein Homology CDS 15378 16292 . - 0 ID=cds-WP_032295941.1;Parent=gene-AB25_RS16865;Dbxref=GenBank:WP_032295941.1;Name=WP_032295941.1;gbkey=CDS;gene=ydeQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310134.1;locus_tag=AB25_RS16865;product=fimbrial protein;protein_id=WP_032295941.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 16352 16855 . - . ID=gene-AB25_RS16860;Name=ydeR;gbkey=Gene;gene=ydeR;gene_biotype=protein_coding;locus_tag=AB25_RS16860;old_locus_tag=AB25_1660 NZ_JJMC01000027.1 Protein Homology CDS 16352 16855 . - 0 ID=cds-WP_000825458.1;Parent=gene-AB25_RS16860;Dbxref=GenBank:WP_000825458.1;Name=WP_000825458.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=ydeR;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416020.1;locus_tag=AB25_RS16860;product=fimbrial protein;protein_id=WP_000825458.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 16868 17398 . - . ID=gene-AB25_RS16855;Name=ydeS;gbkey=Gene;gene=ydeS;gene_biotype=protein_coding;locus_tag=AB25_RS16855;old_locus_tag=AB25_1661 NZ_JJMC01000027.1 Protein Homology CDS 16868 17398 . - 0 ID=cds-WP_000876784.1;Parent=gene-AB25_RS16855;Dbxref=GenBank:WP_000876784.1;Name=WP_000876784.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=ydeS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310136.1;locus_tag=AB25_RS16855;product=fimbrial protein;protein_id=WP_000876784.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 17412 20063 . - . ID=gene-AB25_RS16850;Name=AB25_RS16850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS16850;old_locus_tag=AB25_1662 NZ_JJMC01000027.1 Protein Homology CDS 17412 20063 . - 0 ID=cds-WP_000125354.1;Parent=gene-AB25_RS16850;Dbxref=GenBank:WP_000125354.1;Name=WP_000125354.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310137.2;locus_tag=AB25_RS16850;product=fimbria/pilus outer membrane usher protein;protein_id=WP_000125354.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 20105 20815 . - . ID=gene-AB25_RS16845;Name=AB25_RS16845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS16845;old_locus_tag=AB25_1663 NZ_JJMC01000027.1 Protein Homology CDS 20105 20815 . - 0 ID=cds-WP_001195166.1;Parent=gene-AB25_RS16845;Dbxref=GenBank:WP_001195166.1;Name=WP_001195166.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310139.1;locus_tag=AB25_RS16845;product=fimbria/pilus periplasmic chaperone;protein_id=WP_001195166.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 21176 21739 . - . ID=gene-AB25_RS16840;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=AB25_RS16840;old_locus_tag=AB25_1664 NZ_JJMC01000027.1 Protein Homology CDS 21176 21739 . - 0 ID=cds-WP_001296758.1;Parent=gene-AB25_RS16840;Dbxref=GenBank:WP_001296758.1;Name=WP_001296758.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=fimA;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310140.1;locus_tag=AB25_RS16840;product=type 1 fimbrial major subunit FimA;protein_id=WP_001296758.1;transl_table=11 NZ_JJMC01000027.1 RefSeq pseudogene 22171 22379 . - . ID=gene-AB25_RS0125120;Name=AB25_RS0125120;end_range=22379,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS0125120;partial=true;pseudo=true NZ_JJMC01000027.1 Protein Homology CDS 22171 22379 . - 0 ID=cds-AB25_RS0125120;Parent=gene-AB25_RS0125120;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006355,GO:0003700,GO:0043565;end_range=22379,.;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226947.1;locus_tag=AB25_RS0125120;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 22691 24013 . - . ID=gene-AB25_RS16835;Name=hipA;gbkey=Gene;gene=hipA;gene_biotype=protein_coding;locus_tag=AB25_RS16835;old_locus_tag=AB25_1665 NZ_JJMC01000027.1 Protein Homology CDS 22691 24013 . - 0 ID=cds-WP_001125463.1;Parent=gene-AB25_RS16835;Dbxref=GenBank:WP_001125463.1;Name=WP_001125463.1;gbkey=CDS;gene=hipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416024.1;locus_tag=AB25_RS16835;product=type II toxin-antitoxin system serine/threonine protein kinase toxin HipA;protein_id=WP_001125463.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 24013 24279 . - . ID=gene-AB25_RS16830;Name=hipB;gbkey=Gene;gene=hipB;gene_biotype=protein_coding;locus_tag=AB25_RS16830;old_locus_tag=AB25_1666 NZ_JJMC01000027.1 Protein Homology CDS 24013 24279 . - 0 ID=cds-WP_001296726.1;Parent=gene-AB25_RS16830;Dbxref=GenBank:WP_001296726.1;Name=WP_001296726.1;gbkey=CDS;gene=hipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416025.1;locus_tag=AB25_RS16830;product=type II toxin-antitoxin system antitoxin HipB;protein_id=WP_001296726.1;transl_table=11 NZ_JJMC01000027.1 RefSeq pseudogene 24488 29907 . - . ID=gene-AB25_RS30245;Name=AB25_RS30245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS30245;old_locus_tag=AB25_1667;pseudo=true NZ_JJMC01000027.1 Protein Homology CDS 24488 29907 . - 0 ID=cds-AB25_RS30245;Parent=gene-AB25_RS30245;Note=frameshifted;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016244610.1;locus_tag=AB25_RS30245;product=ECSE_1600 family autotransporter;pseudo=true;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 30438 32030 . - . ID=gene-AB25_RS16825;Name=lsrK;gbkey=Gene;gene=lsrK;gene_biotype=protein_coding;locus_tag=AB25_RS16825;old_locus_tag=AB25_1669 NZ_JJMC01000027.1 Protein Homology CDS 30438 32030 . - 0 ID=cds-WP_000113125.1;Parent=gene-AB25_RS16825;Dbxref=GenBank:WP_000113125.1;Name=WP_000113125.1;Ontology_term=GO:0005975,GO:0009372,GO:0071518;gbkey=CDS;gene=lsrK;go_function=autoinducer-2 kinase activity|0071518||IEA;go_process=carbohydrate metabolic process|0005975||IEA,quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416028.3;locus_tag=AB25_RS16825;product=autoinducer-2 kinase;protein_id=WP_000113125.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 32109 33062 . - . ID=gene-AB25_RS16820;Name=lsrR;gbkey=Gene;gene=lsrR;gene_biotype=protein_coding;locus_tag=AB25_RS16820;old_locus_tag=AB25_1670 NZ_JJMC01000027.1 Protein Homology CDS 32109 33062 . - 0 ID=cds-WP_000154340.1;Parent=gene-AB25_RS16820;Dbxref=GenBank:WP_000154340.1;Name=WP_000154340.1;gbkey=CDS;gene=lsrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707462.1;locus_tag=AB25_RS16820;product=transcriptional regulator LsrR;protein_id=WP_000154340.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 33311 34846 . + . ID=gene-AB25_RS16815;Name=lsrA;gbkey=Gene;gene=lsrA;gene_biotype=protein_coding;locus_tag=AB25_RS16815;old_locus_tag=AB25_1671 NZ_JJMC01000027.1 Protein Homology CDS 33311 34846 . + 0 ID=cds-WP_032170710.1;Parent=gene-AB25_RS16815;Dbxref=GenBank:WP_032170710.1;Name=WP_032170710.1;Ontology_term=GO:1905887,GO:0005524,GO:0042626,GO:0016020;gbkey=CDS;gene=lsrA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416030.1;locus_tag=AB25_RS16815;product=autoinducer 2 ABC transporter ATP-binding protein LsrA;protein_id=WP_032170710.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 34840 35868 . + . ID=gene-AB25_RS16810;Name=lsrC;gbkey=Gene;gene=lsrC;gene_biotype=protein_coding;locus_tag=AB25_RS16810;old_locus_tag=AB25_1672 NZ_JJMC01000027.1 Protein Homology CDS 34840 35868 . + 0 ID=cds-WP_032170711.1;Parent=gene-AB25_RS16810;Dbxref=GenBank:WP_032170711.1;Name=WP_032170711.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lsrC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416031.1;locus_tag=AB25_RS16810;product=autoinducer 2 ABC transporter permease LsrC;protein_id=WP_032170711.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 35868 36860 . + . ID=gene-AB25_RS16805;Name=lsrD;gbkey=Gene;gene=lsrD;gene_biotype=protein_coding;locus_tag=AB25_RS16805;old_locus_tag=AB25_1673 NZ_JJMC01000027.1 Protein Homology CDS 35868 36860 . + 0 ID=cds-WP_001222721.1;Parent=gene-AB25_RS16805;Dbxref=GenBank:WP_001222721.1;Name=WP_001222721.1;gbkey=CDS;gene=lsrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416032.1;locus_tag=AB25_RS16805;product=autoinducer 2 ABC transporter permease LsrD;protein_id=WP_001222721.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 36872 37894 . + . ID=gene-AB25_RS16800;Name=lsrB;gbkey=Gene;gene=lsrB;gene_biotype=protein_coding;locus_tag=AB25_RS16800;old_locus_tag=AB25_1674 NZ_JJMC01000027.1 Protein Homology CDS 36872 37894 . + 0 ID=cds-WP_000172466.1;Parent=gene-AB25_RS16800;Dbxref=GenBank:WP_000172466.1;Name=WP_000172466.1;gbkey=CDS;gene=lsrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310150.1;locus_tag=AB25_RS16800;product=autoinducer 2 ABC transporter substrate-binding protein LsrB;protein_id=WP_000172466.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 37921 38796 . + . ID=gene-AB25_RS16795;Name=lsrF;gbkey=Gene;gene=lsrF;gene_biotype=protein_coding;locus_tag=AB25_RS16795;old_locus_tag=AB25_1675 NZ_JJMC01000027.1 Protein Homology CDS 37921 38796 . + 0 ID=cds-WP_000774183.1;Parent=gene-AB25_RS16795;Dbxref=GenBank:WP_000774183.1;Name=WP_000774183.1;Ontology_term=GO:0016829;gbkey=CDS;gene=lsrF;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310151.1;locus_tag=AB25_RS16795;product=3-hydroxy-5-phosphonooxypentane-2%2C4-dione thiolase;protein_id=WP_000774183.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 38820 39110 . + . ID=gene-AB25_RS16790;Name=lsrG;gbkey=Gene;gene=lsrG;gene_biotype=protein_coding;locus_tag=AB25_RS16790;old_locus_tag=AB25_1676 NZ_JJMC01000027.1 Protein Homology CDS 38820 39110 . + 0 ID=cds-WP_000558527.1;Parent=gene-AB25_RS16790;Dbxref=GenBank:WP_000558527.1;Name=WP_000558527.1;gbkey=CDS;gene=lsrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310152.1;locus_tag=AB25_RS16790;product=(4S)-4-hydroxy-5-phosphonooxypentane-2%2C3-dione isomerase;protein_id=WP_000558527.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 39167 39925 . + . ID=gene-AB25_RS16785;Name=tam;gbkey=Gene;gene=tam;gene_biotype=protein_coding;locus_tag=AB25_RS16785;old_locus_tag=AB25_1677 NZ_JJMC01000027.1 Protein Homology CDS 39167 39925 . + 0 ID=cds-WP_001286581.1;Parent=gene-AB25_RS16785;Dbxref=GenBank:WP_001286581.1;Name=WP_001286581.1;Ontology_term=GO:0030798;gbkey=CDS;gene=tam;go_function=trans-aconitate 2-methyltransferase activity|0030798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416036.1;locus_tag=AB25_RS16785;product=trans-aconitate 2-methyltransferase;protein_id=WP_001286581.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 39929 40843 . - . ID=gene-AB25_RS16780;Name=yneE;gbkey=Gene;gene=yneE;gene_biotype=protein_coding;locus_tag=AB25_RS16780;old_locus_tag=AB25_1678 NZ_JJMC01000027.1 Protein Homology CDS 39929 40843 . - 0 ID=cds-WP_000637082.1;Parent=gene-AB25_RS16780;Dbxref=GenBank:WP_000637082.1;Name=WP_000637082.1;Ontology_term=GO:0005254;gbkey=CDS;gene=yneE;go_function=chloride channel activity|0005254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416037.2;locus_tag=AB25_RS16780;product=bestrophin family protein;protein_id=WP_000637082.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 41050 42501 . - . ID=gene-AB25_RS16775;Name=uxaB;gbkey=Gene;gene=uxaB;gene_biotype=protein_coding;locus_tag=AB25_RS16775;old_locus_tag=AB25_1679 NZ_JJMC01000027.1 Protein Homology CDS 41050 42501 . - 0 ID=cds-WP_000854624.1;Parent=gene-AB25_RS16775;Dbxref=GenBank:WP_000854624.1;Name=WP_000854624.1;gbkey=CDS;gene=uxaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310155.1;locus_tag=AB25_RS16775;product=tagaturonate reductase;protein_id=WP_000854624.1;transl_table=11 NZ_JJMC01000027.1 RefSeq pseudogene 42728 44145 . - . ID=gene-AB25_RS16770;Name=AB25_RS16770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS16770;old_locus_tag=AB25_1681;pseudo=true NZ_JJMC01000027.1 Protein Homology CDS 42728 44145 . - 0 ID=cds-AB25_RS16770;Parent=gene-AB25_RS16770;Note=frameshifted;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621;gbkey=CDS;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310156.2;locus_tag=AB25_RS16770;product=sensor domain-containing diguanylate cyclase;pseudo=true;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 44284 44643 . - . ID=gene-AB25_RS16760;Name=yneG;gbkey=Gene;gene=yneG;gene_biotype=protein_coding;locus_tag=AB25_RS16760;old_locus_tag=AB25_1683 NZ_JJMC01000027.1 Protein Homology CDS 44284 44643 . - 0 ID=cds-WP_001191027.1;Parent=gene-AB25_RS16760;Dbxref=GenBank:WP_001191027.1;Name=WP_001191027.1;gbkey=CDS;gene=yneG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416040.1;locus_tag=AB25_RS16760;product=DUF4186 domain-containing protein;protein_id=WP_001191027.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 44643 45569 . - . ID=gene-AB25_RS16755;Name=glsB;gbkey=Gene;gene=glsB;gene_biotype=protein_coding;locus_tag=AB25_RS16755;old_locus_tag=AB25_1684 NZ_JJMC01000027.1 Protein Homology CDS 44643 45569 . - 0 ID=cds-WP_000257409.1;Parent=gene-AB25_RS16755;Dbxref=GenBank:WP_000257409.1;Name=WP_000257409.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsB;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310158.1;locus_tag=AB25_RS16755;product=glutaminase B;protein_id=WP_000257409.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 45633 47021 . - . ID=gene-AB25_RS16750;Name=sad;gbkey=Gene;gene=sad;gene_biotype=protein_coding;locus_tag=AB25_RS16750;old_locus_tag=AB25_1685 NZ_JJMC01000027.1 Protein Homology CDS 45633 47021 . - 0 ID=cds-WP_001296740.1;Parent=gene-AB25_RS16750;Dbxref=GenBank:WP_001296740.1;Name=WP_001296740.1;Ontology_term=GO:0004030;gbkey=CDS;gene=sad;go_function=aldehyde dehydrogenase [NAD(P)+] activity|0004030||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416042.2;locus_tag=AB25_RS16750;product=succinate-semialdehyde dehydrogenase;protein_id=WP_001296740.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 47122 48003 . + . ID=gene-AB25_RS16745;Name=ptrR;gbkey=Gene;gene=ptrR;gene_biotype=protein_coding;locus_tag=AB25_RS16745;old_locus_tag=AB25_1686 NZ_JJMC01000027.1 Protein Homology CDS 47122 48003 . + 0 ID=cds-WP_000366463.1;Parent=gene-AB25_RS16745;Dbxref=GenBank:WP_000366463.1;Name=WP_000366463.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptrR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310160.1;locus_tag=AB25_RS16745;product=putrescine utilization regulator PtrR;protein_id=WP_000366463.1;transl_table=11 NZ_JJMC01000027.1 RefSeq pseudogene 48081 49195 . + . ID=gene-AB25_RS31980;Name=yneK;gbkey=Gene;gene=yneK;gene_biotype=pseudogene;locus_tag=AB25_RS31980;pseudo=true NZ_JJMC01000027.1 Protein Homology CDS 48081 49195 . + 0 ID=cds-AB25_RS31980;Parent=gene-AB25_RS31980;Note=frameshifted;gbkey=CDS;gene=yneK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707449.1;locus_tag=AB25_RS31980;product=putative protein YneK;pseudo=true;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 49345 50535 . + . ID=gene-AB25_RS16735;Name=ydeA;gbkey=Gene;gene=ydeA;gene_biotype=protein_coding;locus_tag=AB25_RS16735;old_locus_tag=AB25_1690 NZ_JJMC01000027.1 Protein Homology CDS 49345 50535 . + 0 ID=cds-WP_000210807.1;Parent=gene-AB25_RS16735;Dbxref=GenBank:WP_000210807.1;Name=WP_000210807.1;gbkey=CDS;gene=ydeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416045.1;locus_tag=AB25_RS16735;product=L-arabinose MFS transporter;protein_id=WP_000210807.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 50560 51225 . - . ID=gene-AB25_RS16730;Name=marC;gbkey=Gene;gene=marC;gene_biotype=protein_coding;locus_tag=AB25_RS16730;old_locus_tag=AB25_1691 NZ_JJMC01000027.1 Protein Homology CDS 50560 51225 . - 0 ID=cds-WP_000885033.1;Parent=gene-AB25_RS16730;Dbxref=GenBank:WP_000885033.1;Name=WP_000885033.1;gbkey=CDS;gene=marC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416046.1;locus_tag=AB25_RS16730;product=NAAT family transporter MarC;protein_id=WP_000885033.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 51437 51871 . + . ID=gene-AB25_RS16725;Name=marR;gbkey=Gene;gene=marR;gene_biotype=protein_coding;locus_tag=AB25_RS16725;old_locus_tag=AB25_1692 NZ_JJMC01000027.1 Protein Homology CDS 51437 51871 . + 0 ID=cds-WP_000843419.1;Parent=gene-AB25_RS16725;Dbxref=GenBank:WP_000843419.1;Name=WP_000843419.1;gbkey=CDS;gene=marR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310164.2;locus_tag=AB25_RS16725;product=multiple antibiotic resistance transcriptional regulator MarR;protein_id=WP_000843419.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 51891 52274 . + . ID=gene-AB25_RS16720;Name=marA;gbkey=Gene;gene=marA;gene_biotype=protein_coding;locus_tag=AB25_RS16720;old_locus_tag=AB25_1693 NZ_JJMC01000027.1 Protein Homology CDS 51891 52274 . + 0 ID=cds-WP_000091199.1;Parent=gene-AB25_RS16720;Dbxref=GenBank:WP_000091199.1;Name=WP_000091199.1;gbkey=CDS;gene=marA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707445.2;locus_tag=AB25_RS16720;product=MDR efflux pump AcrAB transcriptional activator MarA;protein_id=WP_000091199.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 52306 52524 . + . ID=gene-AB25_RS16715;Name=marB;gbkey=Gene;gene=marB;gene_biotype=protein_coding;locus_tag=AB25_RS16715;old_locus_tag=AB25_1694 NZ_JJMC01000027.1 Protein Homology CDS 52306 52524 . + 0 ID=cds-WP_000803659.1;Parent=gene-AB25_RS16715;Dbxref=GenBank:WP_000803659.1;Name=WP_000803659.1;gbkey=CDS;gene=marB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416049.1;locus_tag=AB25_RS16715;product=multiple antibiotic resistance protein MarB;protein_id=WP_000803659.1;transl_table=11 NZ_JJMC01000027.1 RefSeq pseudogene 52620 54020 . - . ID=gene-AB25_RS0125140;Name=AB25_RS0125140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS0125140;pseudo=true NZ_JJMC01000027.1 Protein Homology CDS 52620 54020 . - 0 ID=cds-AB25_RS0125140;Parent=gene-AB25_RS0125140;Note=internal stop;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001680802.1;locus_tag=AB25_RS0125140;product=6-phospho-beta-glucosidase;pseudo=true;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 54045 55718 . - . ID=gene-AB25_RS16710;Name=AB25_RS16710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS16710;old_locus_tag=AB25_1697 NZ_JJMC01000027.1 Protein Homology CDS 54045 55718 . - 0 ID=cds-WP_001022772.1;Parent=gene-AB25_RS16710;Dbxref=GenBank:WP_001022772.1;Name=WP_001022772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233185.1;locus_tag=AB25_RS16710;product=carbohydrate porin;protein_id=WP_001022772.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 55774 56085 . - . ID=gene-AB25_RS16705;Name=AB25_RS16705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS16705;old_locus_tag=AB25_1698 NZ_JJMC01000027.1 Protein Homology CDS 55774 56085 . - 0 ID=cds-WP_001296721.1;Parent=gene-AB25_RS16705;Dbxref=GenBank:WP_001296721.1;Name=WP_001296721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001314746.1;locus_tag=AB25_RS16705;product=PTS lactose/cellobiose transporter subunit IIA;protein_id=WP_001296721.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 56113 57435 . - . ID=gene-AB25_RS16700;Name=AB25_RS16700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS16700;old_locus_tag=AB25_1699 NZ_JJMC01000027.1 Protein Homology CDS 56113 57435 . - 0 ID=cds-WP_000523802.1;Parent=gene-AB25_RS16700;Dbxref=GenBank:WP_000523802.1;Name=WP_000523802.1;Ontology_term=GO:0009401,GO:0016773,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001736301.1;locus_tag=AB25_RS16700;product=PTS sugar transporter subunit IIC;protein_id=WP_000523802.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 57550 57861 . - . ID=gene-AB25_RS16695;Name=AB25_RS16695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS16695;old_locus_tag=AB25_1700 NZ_JJMC01000027.1 Protein Homology CDS 57550 57861 . - 0 ID=cds-WP_000722138.1;Parent=gene-AB25_RS16695;Dbxref=GenBank:WP_000722138.1;Name=WP_000722138.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000722572.1;locus_tag=AB25_RS16695;product=PTS sugar transporter subunit IIB;protein_id=WP_000722138.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 58060 58758 . + . ID=gene-AB25_RS16690;Name=AB25_RS16690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS16690;old_locus_tag=AB25_1702 NZ_JJMC01000027.1 Protein Homology CDS 58060 58758 . + 0 ID=cds-WP_000577184.1;Parent=gene-AB25_RS16690;Dbxref=GenBank:WP_000577184.1;Name=WP_000577184.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000577178.1;locus_tag=AB25_RS16690;product=GntR family transcriptional regulator;protein_id=WP_000577184.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 58803 59702 . - . ID=gene-AB25_RS16685;Name=eamA;gbkey=Gene;gene=eamA;gene_biotype=protein_coding;locus_tag=AB25_RS16685;old_locus_tag=AB25_1703 NZ_JJMC01000027.1 Protein Homology CDS 58803 59702 . - 0 ID=cds-WP_000087192.1;Parent=gene-AB25_RS16685;Dbxref=GenBank:WP_000087192.1;Name=WP_000087192.1;Ontology_term=GO:0016020;gbkey=CDS;gene=eamA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310167.1;locus_tag=AB25_RS16685;product=O-acetylserine/cysteine exporter;protein_id=WP_000087192.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 59897 61084 . + . ID=gene-AB25_RS16680;Name=ydeE;gbkey=Gene;gene=ydeE;gene_biotype=protein_coding;locus_tag=AB25_RS16680;old_locus_tag=AB25_1705 NZ_JJMC01000027.1 Protein Homology CDS 59897 61084 . + 0 ID=cds-WP_032170713.1;Parent=gene-AB25_RS16680;Dbxref=GenBank:WP_032170713.1;Name=WP_032170713.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydeE;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416051.1;locus_tag=AB25_RS16680;product=efflux MFS transporter YdeE;protein_id=WP_032170713.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 61211 61306 . + . ID=gene-AB25_RS0125145;Name=mgtS;gbkey=Gene;gene=mgtS;gene_biotype=protein_coding;locus_tag=AB25_RS0125145 NZ_JJMC01000027.1 Protein Homology CDS 61211 61306 . + 0 ID=cds-WP_000901367.1;Parent=gene-AB25_RS0125145;Dbxref=GenBank:WP_000901367.1;Name=WP_000901367.1;gbkey=CDS;gene=mgtS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165319.1;locus_tag=AB25_RS0125145;product=protein MgtS;protein_id=WP_000901367.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 61306 61410 . + . ID=gene-AB25_RS32250;Name=mgtT;gbkey=Gene;gene=mgtT;gene_biotype=protein_coding;locus_tag=AB25_RS32250 NZ_JJMC01000027.1 Protein Homology CDS 61306 61410 . + 0 ID=cds-WP_211180496.1;Parent=gene-AB25_RS32250;Dbxref=GenBank:WP_211180496.1;Name=WP_211180496.1;gbkey=CDS;gene=mgtT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051185.1;locus_tag=AB25_RS32250;product=protein MgtT;protein_id=WP_211180496.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 61525 62415 . - . ID=gene-AB25_RS16675;Name=dgcZ;gbkey=Gene;gene=dgcZ;gene_biotype=protein_coding;locus_tag=AB25_RS16675;old_locus_tag=AB25_1706 NZ_JJMC01000027.1 Protein Homology CDS 61525 62415 . - 0 ID=cds-WP_000592826.1;Parent=gene-AB25_RS16675;Dbxref=GenBank:WP_000592826.1;Name=WP_000592826.1;gbkey=CDS;gene=dgcZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416052.1;locus_tag=AB25_RS16675;product=diguanylate cyclase DgcZ;protein_id=WP_000592826.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 62670 63062 . - . ID=gene-AB25_RS16670;Name=ydeI;gbkey=Gene;gene=ydeI;gene_biotype=protein_coding;locus_tag=AB25_RS16670;old_locus_tag=AB25_1707 NZ_JJMC01000027.1 Protein Homology CDS 62670 63062 . - 0 ID=cds-WP_000671731.1;Parent=gene-AB25_RS16670;Dbxref=GenBank:WP_000671731.1;Name=WP_000671731.1;gbkey=CDS;gene=ydeI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416054.1;locus_tag=AB25_RS16670;product=YdeI family stress tolerance OB fold protein;protein_id=WP_000671731.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 63338 63856 . + . ID=gene-AB25_RS16665;Name=ydeJ;gbkey=Gene;gene=ydeJ;gene_biotype=protein_coding;locus_tag=AB25_RS16665;old_locus_tag=AB25_1708 NZ_JJMC01000027.1 Protein Homology CDS 63338 63856 . + 0 ID=cds-WP_001024810.1;Parent=gene-AB25_RS16665;Dbxref=GenBank:WP_001024810.1;Name=WP_001024810.1;gbkey=CDS;gene=ydeJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707440.1;locus_tag=AB25_RS16665;product=2-oxo-tetronate isomerase;protein_id=WP_001024810.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 63901 65946 . - . ID=gene-AB25_RS16660;Name=dcp;gbkey=Gene;gene=dcp;gene_biotype=protein_coding;locus_tag=AB25_RS16660;old_locus_tag=AB25_1709 NZ_JJMC01000027.1 Protein Homology CDS 63901 65946 . - 0 ID=cds-WP_032295948.1;Parent=gene-AB25_RS16660;Dbxref=GenBank:WP_032295948.1;Name=WP_032295948.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=dcp;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310174.1;locus_tag=AB25_RS16660;product=peptidyl-dipeptidase Dcp;protein_id=WP_032295948.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 66083 66829 . + . ID=gene-AB25_RS16655;Name=ydfG;gbkey=Gene;gene=ydfG;gene_biotype=protein_coding;locus_tag=AB25_RS16655;old_locus_tag=AB25_1710 NZ_JJMC01000027.1 Protein Homology CDS 66083 66829 . + 0 ID=cds-WP_000636571.1;Parent=gene-AB25_RS16655;Dbxref=GenBank:WP_000636571.1;Name=WP_000636571.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydfG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416057.1;locus_tag=AB25_RS16655;product=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;protein_id=WP_000636571.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 66918 67604 . + . ID=gene-AB25_RS16650;Name=rspR;gbkey=Gene;gene=rspR;gene_biotype=protein_coding;gene_synonym=ydfH;locus_tag=AB25_RS16650;old_locus_tag=AB25_1711 NZ_JJMC01000027.1 Protein Homology CDS 66918 67604 . + 0 ID=cds-WP_000215549.1;Parent=gene-AB25_RS16650;Dbxref=GenBank:WP_000215549.1;Name=WP_000215549.1;gbkey=CDS;gene=rspR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310176.1;locus_tag=AB25_RS16650;product=DNA-binding transcriptional regulator rspR;protein_id=WP_000215549.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 67782 67985 . + . ID=gene-AB25_RS16645;Name=ydfZ;gbkey=Gene;gene=ydfZ;gene_biotype=protein_coding;locus_tag=AB25_RS16645;old_locus_tag=AB25_1712 NZ_JJMC01000027.1 Protein Homology CDS 67782 67985 . + 0 ID=cds-WP_000214712.1;Parent=gene-AB25_RS16645;Dbxref=GenBank:WP_000214712.1;Name=WP_000214712.1;gbkey=CDS;gene=ydfZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310177.1;locus_tag=AB25_RS16645;product=putative selenium delivery protein YdfZ;protein_id=WP_000214712.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 68020 69480 . - . ID=gene-AB25_RS16640;Name=ydfI;gbkey=Gene;gene=ydfI;gene_biotype=protein_coding;locus_tag=AB25_RS16640;old_locus_tag=AB25_1713 NZ_JJMC01000027.1 Protein Homology CDS 68020 69480 . - 0 ID=cds-WP_000527753.1;Parent=gene-AB25_RS16640;Dbxref=GenBank:WP_000527753.1;Name=WP_000527753.1;Ontology_term=GO:0016616;gbkey=CDS;gene=ydfI;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707435.1;locus_tag=AB25_RS16640;product=mannitol dehydrogenase family protein;protein_id=WP_000527753.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 69569 70936 . - . ID=gene-AB25_RS16635;Name=ydfJ;gbkey=Gene;gene=ydfJ;gene_biotype=protein_coding;locus_tag=AB25_RS16635;old_locus_tag=AB25_1714 NZ_JJMC01000027.1 Protein Homology CDS 69569 70936 . - 0 ID=cds-WP_000151243.1;Parent=gene-AB25_RS16635;Dbxref=GenBank:WP_000151243.1;Name=WP_000151243.1;gbkey=CDS;gene=ydfJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000582800.1;locus_tag=AB25_RS16635;product=MHS family MFS transporter YdfJ;protein_id=WP_000151243.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 70994 72013 . - . ID=gene-AB25_RS16630;Name=rspB;gbkey=Gene;gene=rspB;gene_biotype=protein_coding;locus_tag=AB25_RS16630;old_locus_tag=AB25_1715 NZ_JJMC01000027.1 Protein Homology CDS 70994 72013 . - 0 ID=cds-WP_000836058.1;Parent=gene-AB25_RS16630;Dbxref=GenBank:WP_000836058.1;Name=WP_000836058.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;gene=rspB;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416097.1;locus_tag=AB25_RS16630;product=Zn-dependent oxidoreductase;protein_id=WP_000836058.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 72025 73239 . - . ID=gene-AB25_RS16625;Name=rspA;gbkey=Gene;gene=rspA;gene_biotype=protein_coding;locus_tag=AB25_RS16625;old_locus_tag=AB25_1716 NZ_JJMC01000027.1 Protein Homology CDS 72025 73239 . - 0 ID=cds-WP_001295394.1;Parent=gene-AB25_RS16625;Dbxref=GenBank:WP_001295394.1;Name=WP_001295394.1;gbkey=CDS;gene=rspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001625315.1;locus_tag=AB25_RS16625;product=starvation-sensing protein RspA;protein_id=WP_001295394.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 73445 73771 . - . ID=gene-AB25_RS16620;Name=ynfA;gbkey=Gene;gene=ynfA;gene_biotype=protein_coding;locus_tag=AB25_RS16620;old_locus_tag=AB25_1717 NZ_JJMC01000027.1 Protein Homology CDS 73445 73771 . - 0 ID=cds-WP_000598292.1;Parent=gene-AB25_RS16620;Dbxref=GenBank:WP_000598292.1;Name=WP_000598292.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ynfA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416099.1;locus_tag=AB25_RS16620;product=YnfA family protein;protein_id=WP_000598292.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 73906 74247 . + . ID=gene-AB25_RS16615;Name=ynfB;gbkey=Gene;gene=ynfB;gene_biotype=protein_coding;locus_tag=AB25_RS16615;old_locus_tag=AB25_1718 NZ_JJMC01000027.1 Protein Homology CDS 73906 74247 . + 0 ID=cds-WP_000705211.1;Parent=gene-AB25_RS16615;Dbxref=GenBank:WP_000705211.1;Name=WP_000705211.1;gbkey=CDS;gene=ynfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416100.1;locus_tag=AB25_RS16615;product=DUF1283 family protein;protein_id=WP_000705211.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 74282 74842 . + . ID=gene-AB25_RS16610;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=AB25_RS16610;old_locus_tag=AB25_1719 NZ_JJMC01000027.1 Protein Homology CDS 74282 74842 . + 0 ID=cds-WP_032170714.1;Parent=gene-AB25_RS16610;Dbxref=GenBank:WP_032170714.1;Name=WP_032170714.1;Ontology_term=GO:0008080;gbkey=CDS;gene=speG;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310317.1;locus_tag=AB25_RS16610;product=spermidine N1-acetyltransferase;protein_id=WP_032170714.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 74845 75555 . - . ID=gene-AB25_RS16605;Name=ynfC;gbkey=Gene;gene=ynfC;gene_biotype=protein_coding;locus_tag=AB25_RS16605;old_locus_tag=AB25_1720 NZ_JJMC01000027.1 Protein Homology CDS 74845 75555 . - 0 ID=cds-WP_001321287.1;Parent=gene-AB25_RS16605;Dbxref=GenBank:WP_001321287.1;Name=WP_001321287.1;Ontology_term=GO:0005886;gbkey=CDS;gene=ynfC;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416102.2;locus_tag=AB25_RS16605;product=YnfC family lipoprotein;protein_id=WP_001321287.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 75663 75968 . + . ID=gene-AB25_RS16600;Name=ynfD;gbkey=Gene;gene=ynfD;gene_biotype=protein_coding;locus_tag=AB25_RS16600;old_locus_tag=AB25_1721 NZ_JJMC01000027.1 Protein Homology CDS 75663 75968 . + 0 ID=cds-WP_001307224.1;Parent=gene-AB25_RS16600;Dbxref=GenBank:WP_001307224.1;Name=WP_001307224.1;gbkey=CDS;gene=ynfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707474.2;locus_tag=AB25_RS16600;product=DUF1161 domain-containing protein;protein_id=WP_001307224.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 76167 78593 . + . ID=gene-AB25_RS16595;Name=ynfE;gbkey=Gene;gene=ynfE;gene_biotype=protein_coding;locus_tag=AB25_RS16595;old_locus_tag=AB25_1722 NZ_JJMC01000027.1 Protein Homology CDS 76167 78593 . + 0 ID=cds-WP_032170715.1;Parent=gene-AB25_RS16595;Dbxref=GenBank:WP_032170715.1;Name=WP_032170715.1;gbkey=CDS;gene=ynfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416104.1;locus_tag=AB25_RS16595;product=selenate/tellurate reductase subunit YnfE;protein_id=WP_032170715.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 78654 81077 . + . ID=gene-AB25_RS16590;Name=ynfF;gbkey=Gene;gene=ynfF;gene_biotype=protein_coding;locus_tag=AB25_RS16590;old_locus_tag=AB25_1723 NZ_JJMC01000027.1 Protein Homology CDS 78654 81077 . + 0 ID=cds-WP_001342404.1;Parent=gene-AB25_RS16590;Dbxref=GenBank:WP_001342404.1;Name=WP_001342404.1;gbkey=CDS;gene=ynfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416105.4;locus_tag=AB25_RS16590;product=selenate/tellurate reductase subunit YnfF;protein_id=WP_001342404.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 81088 81705 . + . ID=gene-AB25_RS16585;Name=ynfG;gbkey=Gene;gene=ynfG;gene_biotype=protein_coding;locus_tag=AB25_RS16585;old_locus_tag=AB25_1724 NZ_JJMC01000027.1 Protein Homology CDS 81088 81705 . + 0 ID=cds-WP_000213028.1;Parent=gene-AB25_RS16585;Dbxref=GenBank:WP_000213028.1;Name=WP_000213028.1;gbkey=CDS;gene=ynfG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=AB25_RS16585;product=DMSO reductase like molybdoenzyme iron-sulfur subunit YnfG;protein_id=WP_000213028.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 81707 82561 . + . ID=gene-AB25_RS16580;Name=ynfH;gbkey=Gene;gene=ynfH;gene_biotype=protein_coding;locus_tag=AB25_RS16580;old_locus_tag=AB25_1725 NZ_JJMC01000027.1 Protein Homology CDS 81707 82561 . + 0 ID=cds-WP_000526490.1;Parent=gene-AB25_RS16580;Dbxref=GenBank:WP_000526490.1;Name=WP_000526490.1;gbkey=CDS;gene=ynfH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416107.1;locus_tag=AB25_RS16580;product=selenate reductase membrane anchor subunit YnfH;protein_id=WP_000526490.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 82604 83218 . + . ID=gene-AB25_RS16575;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=AB25_RS16575;old_locus_tag=AB25_1726 NZ_JJMC01000027.1 Protein Homology CDS 82604 83218 . + 0 ID=cds-WP_000148710.1;Parent=gene-AB25_RS16575;Dbxref=GenBank:WP_000148710.1;Name=WP_000148710.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707489.2;locus_tag=AB25_RS16575;product=Tat proofreading chaperone DmsD;protein_id=WP_000148710.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 83377 84669 . + . ID=gene-AB25_RS16570;Name=clcB;gbkey=Gene;gene=clcB;gene_biotype=protein_coding;locus_tag=AB25_RS16570;old_locus_tag=AB25_1727 NZ_JJMC01000027.1 Protein Homology CDS 83377 84669 . + 0 ID=cds-WP_071606760.1;Parent=gene-AB25_RS16570;Dbxref=GenBank:WP_071606760.1;Name=WP_071606760.1;Ontology_term=GO:0006821,GO:0010447,GO:0005247,GO:0016020;gbkey=CDS;gene=clcB;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,response to acidic pH|0010447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001296088.1;locus_tag=AB25_RS16570;product=voltage-gated ClC-type chloride channel ClcB;protein_id=WP_071606760.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 84622 85317 . - . ID=gene-AB25_RS16565;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=AB25_RS16565;old_locus_tag=AB25_1728 NZ_JJMC01000027.1 Protein Homology CDS 84622 85317 . - 0 ID=cds-WP_001392157.1;Parent=gene-AB25_RS16565;Dbxref=GenBank:WP_001392157.1;Name=WP_001392157.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310326.2;locus_tag=AB25_RS16565;product=dethiobiotin synthase;protein_id=WP_001392157.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 85442 86662 . - . ID=gene-AB25_RS16560;Name=mlc;gbkey=Gene;gene=mlc;gene_biotype=protein_coding;gene_synonym=dgsA;locus_tag=AB25_RS16560;old_locus_tag=AB25_1729 NZ_JJMC01000027.1 Protein Homology CDS 85442 86662 . - 0 ID=cds-WP_000225276.1;Parent=gene-AB25_RS16560;Dbxref=GenBank:WP_000225276.1;Name=WP_000225276.1;Ontology_term=GO:0006355,GO:0003677,GO:0046872;gbkey=CDS;gene=mlc;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310327.1;locus_tag=AB25_RS16560;product=sugar metabolism global transcriptional regulator Mlc;protein_id=WP_000225276.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 86797 87690 . - . ID=gene-AB25_RS16555;Name=ynfL;gbkey=Gene;gene=ynfL;gene_biotype=protein_coding;locus_tag=AB25_RS16555;old_locus_tag=AB25_1730 NZ_JJMC01000027.1 Protein Homology CDS 86797 87690 . - 0 ID=cds-WP_001019530.1;Parent=gene-AB25_RS16555;Dbxref=GenBank:WP_001019530.1;Name=WP_001019530.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=ynfL;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310328.1;locus_tag=AB25_RS16555;product=LysR family transcriptional regulator;protein_id=WP_001019530.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 87797 89050 . + . ID=gene-AB25_RS16550;Name=ynfM;gbkey=Gene;gene=ynfM;gene_biotype=protein_coding;locus_tag=AB25_RS16550;old_locus_tag=AB25_1731 NZ_JJMC01000027.1 Protein Homology CDS 87797 89050 . + 0 ID=cds-WP_000091819.1;Parent=gene-AB25_RS16550;Dbxref=GenBank:WP_000091819.1;Name=WP_000091819.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;gene=ynfM;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416113.1;locus_tag=AB25_RS16550;product=MFS transporter;protein_id=WP_000091819.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 89099 89218 . - . ID=gene-AB25_RS32960;Name=AB25_RS32960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32960;old_locus_tag=AB25_1732 NZ_JJMC01000027.1 Protein Homology CDS 89099 89218 . - 0 ID=cds-WP_001299090.1;Parent=gene-AB25_RS32960;Dbxref=GenBank:WP_001299090.1;Name=WP_001299090.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033695.1;locus_tag=AB25_RS32960;product=KPN_01571 family protein;protein_id=WP_001299090.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 89474 89782 . + . ID=gene-AB25_RS16545;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=AB25_RS16545;old_locus_tag=AB25_1733 NZ_JJMC01000027.1 Protein Homology CDS 89474 89782 . + 0 ID=cds-WP_001342195.1;Parent=gene-AB25_RS16545;Dbxref=GenBank:WP_001342195.1;Name=WP_001342195.1;gbkey=CDS;gene=asr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310330.2;locus_tag=AB25_RS16545;product=acid resistance repetitive basic protein Asr;protein_id=WP_001342195.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 89875 89958 . + . ID=gene-AB25_RS0125150;Name=AB25_RS0125150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0125150 NZ_JJMC01000027.1 Protein Homology CDS 89875 89958 . + 0 ID=cds-WP_000233090.1;Parent=gene-AB25_RS0125150;Dbxref=GenBank:WP_000233090.1;Name=WP_000233090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165320.1;locus_tag=AB25_RS0125150;product=hypothetical protein;protein_id=WP_000233090.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 90058 90879 . + . ID=gene-AB25_RS16540;Name=ydgD;gbkey=Gene;gene=ydgD;gene_biotype=protein_coding;locus_tag=AB25_RS16540;old_locus_tag=AB25_1734 NZ_JJMC01000027.1 Protein Homology CDS 90058 90879 . + 0 ID=cds-WP_001260840.1;Parent=gene-AB25_RS16540;Dbxref=GenBank:WP_001260840.1;Name=WP_001260840.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;gene=ydgD;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707495.1;locus_tag=AB25_RS16540;product=trypsin-like serine peptidase;protein_id=WP_001260840.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 90918 91247 . - . ID=gene-AB25_RS16535;Name=mdtI;gbkey=Gene;gene=mdtI;gene_biotype=protein_coding;locus_tag=AB25_RS16535;old_locus_tag=AB25_1735 NZ_JJMC01000027.1 Protein Homology CDS 90918 91247 . - 0 ID=cds-WP_000046661.1;Parent=gene-AB25_RS16535;Dbxref=GenBank:WP_000046661.1;Name=WP_000046661.1;gbkey=CDS;gene=mdtI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310332.1;locus_tag=AB25_RS16535;product=multidrug/spermidine efflux SMR transporter subunit MdtI;protein_id=WP_000046661.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 91234 91599 . - . ID=gene-AB25_RS16530;Name=mdtJ;gbkey=Gene;gene=mdtJ;gene_biotype=protein_coding;locus_tag=AB25_RS16530;old_locus_tag=AB25_1736 NZ_JJMC01000027.1 Protein Homology CDS 91234 91599 . - 0 ID=cds-WP_000276152.1;Parent=gene-AB25_RS16530;Dbxref=GenBank:WP_000276152.1;Name=WP_000276152.1;Ontology_term=GO:0015848,GO:0015606,GO:0016020;gbkey=CDS;gene=mdtJ;go_component=membrane|0016020||IEA;go_function=spermidine transmembrane transporter activity|0015606||IEA;go_process=spermidine transport|0015848||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310333.1;locus_tag=AB25_RS16530;product=multidrug/spermidine efflux SMR transporter subunit MdtJ;protein_id=WP_000276152.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 91706 91876 . - . ID=gene-AB25_RS32965;Name=AB25_RS32965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32965 NZ_JJMC01000027.1 Protein Homology CDS 91706 91876 . - 0 ID=cds-WP_001303517.1;Parent=gene-AB25_RS32965;Dbxref=GenBank:WP_001303517.1;Name=WP_001303517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001334396.1;locus_tag=AB25_RS32965;product=hypothetical protein;protein_id=WP_001303517.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 92011 93045 . + . ID=gene-AB25_RS16525;Name=tqsA;gbkey=Gene;gene=tqsA;gene_biotype=protein_coding;locus_tag=AB25_RS16525;old_locus_tag=AB25_1737 NZ_JJMC01000027.1 Protein Homology CDS 92011 93045 . + 0 ID=cds-WP_001118241.1;Parent=gene-AB25_RS16525;Dbxref=GenBank:WP_001118241.1;Name=WP_001118241.1;gbkey=CDS;gene=tqsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416118.1;locus_tag=AB25_RS16525;product=AI-2 transporter TqsA;protein_id=WP_001118241.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 93070 94458 . - . ID=gene-AB25_RS16520;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=AB25_RS16520;old_locus_tag=AB25_1738 NZ_JJMC01000027.1 Protein Homology CDS 93070 94458 . - 0 ID=cds-WP_000014036.1;Parent=gene-AB25_RS16520;Dbxref=GenBank:WP_000014036.1;Name=WP_000014036.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014033.1;locus_tag=AB25_RS16520;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WP_000014036.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 94469 96001 . - . ID=gene-AB25_RS16515;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=AB25_RS16515;old_locus_tag=AB25_1739 NZ_JJMC01000027.1 Protein Homology CDS 94469 96001 . - 0 ID=cds-WP_032170718.1;Parent=gene-AB25_RS16515;Dbxref=GenBank:WP_032170718.1;Name=WP_032170718.1;Ontology_term=GO:1902600,GO:0008750;gbkey=CDS;gene=pntA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416120.1;locus_tag=AB25_RS16515;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_032170718.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 96525 97469 . + . ID=gene-AB25_RS16510;Name=ydgH;gbkey=Gene;gene=ydgH;gene_biotype=protein_coding;locus_tag=AB25_RS16510;old_locus_tag=AB25_1740 NZ_JJMC01000027.1 Protein Homology CDS 96525 97469 . + 0 ID=cds-WP_000769322.1;Parent=gene-AB25_RS16510;Dbxref=GenBank:WP_000769322.1;Name=WP_000769322.1;gbkey=CDS;gene=ydgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310337.1;locus_tag=AB25_RS16510;product=DUF1471 family protein YdgH;protein_id=WP_000769322.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 97655 99037 . + . ID=gene-AB25_RS16505;Name=ydgI;gbkey=Gene;gene=ydgI;gene_biotype=protein_coding;locus_tag=AB25_RS16505;old_locus_tag=AB25_1741 NZ_JJMC01000027.1 Protein Homology CDS 97655 99037 . + 0 ID=cds-WP_000412379.1;Parent=gene-AB25_RS16505;Dbxref=GenBank:WP_000412379.1;Name=WP_000412379.1;gbkey=CDS;gene=ydgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416122.1;locus_tag=AB25_RS16505;product=amino acid permease;protein_id=WP_000412379.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 99074 99796 . + . ID=gene-AB25_RS16500;Name=folM;gbkey=Gene;gene=folM;gene_biotype=protein_coding;locus_tag=AB25_RS16500;old_locus_tag=AB25_1742 NZ_JJMC01000027.1 Protein Homology CDS 99074 99796 . + 0 ID=cds-WP_000513679.1;Parent=gene-AB25_RS16500;Dbxref=GenBank:WP_000513679.1;Name=WP_000513679.1;Ontology_term=GO:0016491;gbkey=CDS;gene=folM;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310339.1;locus_tag=AB25_RS16500;product=dihydromonapterin reductase;protein_id=WP_000513679.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 99793 100128 . - . ID=gene-AB25_RS16495;Name=ydgC;gbkey=Gene;gene=ydgC;gene_biotype=protein_coding;locus_tag=AB25_RS16495;old_locus_tag=AB25_1743 NZ_JJMC01000027.1 Protein Homology CDS 99793 100128 . - 0 ID=cds-WP_000524868.1;Parent=gene-AB25_RS16495;Dbxref=GenBank:WP_000524868.1;Name=WP_000524868.1;gbkey=CDS;gene=ydgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310340.1;locus_tag=AB25_RS16495;product=GlpM family protein;protein_id=WP_000524868.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 100257 100976 . + . ID=gene-AB25_RS16490;Name=rstA;gbkey=Gene;gene=rstA;gene_biotype=protein_coding;locus_tag=AB25_RS16490;old_locus_tag=AB25_1744 NZ_JJMC01000027.1 Protein Homology CDS 100257 100976 . + 0 ID=cds-WP_032170720.1;Parent=gene-AB25_RS16490;Dbxref=GenBank:WP_032170720.1;Name=WP_032170720.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=rstA;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416125.2;locus_tag=AB25_RS16490;product=two-component system response regulator RstA;protein_id=WP_032170720.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 100980 102281 . + . ID=gene-AB25_RS16485;Name=rstB;gbkey=Gene;gene=rstB;gene_biotype=protein_coding;locus_tag=AB25_RS16485;old_locus_tag=AB25_1745 NZ_JJMC01000027.1 Protein Homology CDS 100980 102281 . + 0 ID=cds-WP_000732497.1;Parent=gene-AB25_RS16485;Dbxref=GenBank:WP_000732497.1;Name=WP_000732497.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=rstB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416126.1;locus_tag=AB25_RS16485;product=two-component system sensor histidine kinase RstB;protein_id=WP_000732497.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 102357 103286 . + . ID=gene-AB25_RS16480;Name=tus;gbkey=Gene;gene=tus;gene_biotype=protein_coding;locus_tag=AB25_RS16480;old_locus_tag=AB25_1746 NZ_JJMC01000027.1 Protein Homology CDS 102357 103286 . + 0 ID=cds-WP_001295399.1;Parent=gene-AB25_RS16480;Dbxref=GenBank:WP_001295399.1;Name=WP_001295399.1;Ontology_term=GO:0006274,GO:0003677,GO:0005737;gbkey=CDS;gene=tus;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310343.1;locus_tag=AB25_RS16480;product=DNA replication terminus site-binding protein;protein_id=WP_001295399.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 103283 104686 . - . ID=gene-AB25_RS16475;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=AB25_RS16475;old_locus_tag=AB25_1747 NZ_JJMC01000027.1 Protein Homology CDS 103283 104686 . - 0 ID=cds-WP_001099102.1;Parent=gene-AB25_RS16475;Dbxref=GenBank:WP_001099102.1;Name=WP_001099102.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310344.1;locus_tag=AB25_RS16475;product=class II fumarate hydratase;protein_id=WP_001099102.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 104829 106475 . - . ID=gene-AB25_RS16470;Name=fumB;gbkey=Gene;gene=fumB;gene_biotype=protein_coding;locus_tag=AB25_RS16470;old_locus_tag=AB25_1748 NZ_JJMC01000027.1 Protein Homology CDS 104829 106475 . - 0 ID=cds-WP_000066639.1;Parent=gene-AB25_RS16470;Dbxref=GenBank:WP_000066639.1;Name=WP_000066639.1;gbkey=CDS;gene=fumB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066594.1;locus_tag=AB25_RS16470;product=class I fumarate hydratase;protein_id=WP_000066639.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 106674 107849 . + . ID=gene-AB25_RS16465;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=AB25_RS16465;old_locus_tag=AB25_1749 NZ_JJMC01000027.1 Protein Homology CDS 106674 107849 . + 0 ID=cds-WP_001170675.1;Parent=gene-AB25_RS16465;Dbxref=GenBank:WP_001170675.1;Name=WP_001170675.1;Ontology_term=GO:0009298,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=GDP-mannose biosynthetic process|0009298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416130.3;locus_tag=AB25_RS16465;product=mannose-6-phosphate isomerase;protein_id=WP_001170675.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 107950 109458 . + . ID=gene-AB25_RS16460;Name=ydgA;gbkey=Gene;gene=ydgA;gene_biotype=protein_coding;locus_tag=AB25_RS16460;old_locus_tag=AB25_1750 NZ_JJMC01000027.1 Protein Homology CDS 107950 109458 . + 0 ID=cds-WP_001043360.1;Parent=gene-AB25_RS16460;Dbxref=GenBank:WP_001043360.1;Name=WP_001043360.1;gbkey=CDS;gene=ydgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416131.1;locus_tag=AB25_RS16460;product=YdgA family protein;protein_id=WP_001043360.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 109503 110768 . - . ID=gene-AB25_RS16455;Name=uidC;gbkey=Gene;gene=uidC;gene_biotype=protein_coding;locus_tag=AB25_RS16455;old_locus_tag=AB25_1751 NZ_JJMC01000027.1 Protein Homology CDS 109503 110768 . - 0 ID=cds-WP_001227021.1;Parent=gene-AB25_RS16455;Dbxref=GenBank:WP_001227021.1;Name=WP_001227021.1;gbkey=CDS;gene=uidC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416132.2;locus_tag=AB25_RS16455;product=glucuronide uptake porin UidC;protein_id=WP_001227021.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 110807 112180 . - . ID=gene-AB25_RS16450;Name=uidB;gbkey=Gene;gene=uidB;gene_biotype=protein_coding;locus_tag=AB25_RS16450;old_locus_tag=AB25_1752 NZ_JJMC01000027.1 Protein Homology CDS 110807 112180 . - 0 ID=cds-WP_001075857.1;Parent=gene-AB25_RS16450;Dbxref=GenBank:WP_001075857.1;Name=WP_001075857.1;Ontology_term=GO:0006810,GO:0022857,GO:0016020;gbkey=CDS;gene=uidB;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416133.1;locus_tag=AB25_RS16450;product=glucuronide transporter;protein_id=WP_001075857.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 112177 113988 . - . ID=gene-AB25_RS16445;Name=uidA;gbkey=Gene;gene=uidA;gene_biotype=protein_coding;locus_tag=AB25_RS16445;old_locus_tag=AB25_1753 NZ_JJMC01000027.1 Protein Homology CDS 112177 113988 . - 0 ID=cds-WP_000945912.1;Parent=gene-AB25_RS16445;Dbxref=GenBank:WP_000945912.1;Name=WP_000945912.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=uidA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416134.1;locus_tag=AB25_RS16445;product=beta-glucuronidase;protein_id=WP_000945912.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 114377 114967 . - . ID=gene-AB25_RS16440;Name=uidR;gbkey=Gene;gene=uidR;gene_biotype=protein_coding;locus_tag=AB25_RS16440;old_locus_tag=AB25_1754 NZ_JJMC01000027.1 Protein Homology CDS 114377 114967 . - 0 ID=cds-WP_000969092.1;Parent=gene-AB25_RS16440;Dbxref=GenBank:WP_000969092.1;Name=WP_000969092.1;gbkey=CDS;gene=uidR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310353.1;locus_tag=AB25_RS16440;product=DNA-binding transcriptional regulator UidR;protein_id=WP_000969092.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 115196 115963 . - . ID=gene-AB25_RS16435;Name=hdhA;gbkey=Gene;gene=hdhA;gene_biotype=protein_coding;locus_tag=AB25_RS16435;old_locus_tag=AB25_1755 NZ_JJMC01000027.1 Protein Homology CDS 115196 115963 . - 0 ID=cds-WP_000483353.1;Parent=gene-AB25_RS16435;Dbxref=GenBank:WP_000483353.1;Name=WP_000483353.1;gbkey=CDS;gene=hdhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310354.1;locus_tag=AB25_RS16435;product=7-alpha-hydroxysteroid dehydrogenase;protein_id=WP_000483353.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 116075 117103 . - . ID=gene-AB25_RS16430;Name=malI;gbkey=Gene;gene=malI;gene_biotype=protein_coding;locus_tag=AB25_RS16430;old_locus_tag=AB25_1756 NZ_JJMC01000027.1 Protein Homology CDS 116075 117103 . - 0 ID=cds-WP_000179513.1;Parent=gene-AB25_RS16430;Dbxref=GenBank:WP_000179513.1;Name=WP_000179513.1;gbkey=CDS;gene=malI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310355.1;locus_tag=AB25_RS16430;product=mal regulon transcriptional regulator MalI;protein_id=WP_000179513.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 117278 118870 . + . ID=gene-AB25_RS16425;Name=malX;gbkey=Gene;gene=malX;gene_biotype=protein_coding;locus_tag=AB25_RS16425;old_locus_tag=AB25_1757 NZ_JJMC01000027.1 Protein Homology CDS 117278 118870 . + 0 ID=cds-WP_032170724.1;Parent=gene-AB25_RS16425;Dbxref=GenBank:WP_032170724.1;Name=WP_032170724.1;gbkey=CDS;gene=malX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416138.1;locus_tag=AB25_RS16425;product=PTS maltose transporter subunit IICB;protein_id=WP_032170724.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 118880 120052 . + . ID=gene-AB25_RS16420;Name=malY;gbkey=Gene;gene=malY;gene_biotype=protein_coding;locus_tag=AB25_RS16420;old_locus_tag=AB25_1758 NZ_JJMC01000027.1 Protein Homology CDS 118880 120052 . + 0 ID=cds-WP_000459412.1;Parent=gene-AB25_RS16420;Dbxref=GenBank:WP_000459412.1;Name=WP_000459412.1;gbkey=CDS;gene=malY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416139.1;locus_tag=AB25_RS16420;product=bifunctional maltose regulon transcriptional repressor/cystathionine beta-lyase MalY;protein_id=WP_000459412.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 120156 121157 . + . ID=gene-AB25_RS16415;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=AB25_RS16415;old_locus_tag=AB25_1759 NZ_JJMC01000027.1 Protein Homology CDS 120156 121157 . + 0 ID=cds-WP_000567478.1;Parent=gene-AB25_RS16415;Dbxref=GenBank:WP_000567478.1;Name=WP_000567478.1;Ontology_term=GO:0009168,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine ribonucleoside monophosphate biosynthetic process|0009168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416140.1;locus_tag=AB25_RS16415;product=adenosine deaminase;protein_id=WP_000567478.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 121192 122232 . - . ID=gene-AB25_RS16410;Name=ydgJ;gbkey=Gene;gene=ydgJ;gene_biotype=protein_coding;locus_tag=AB25_RS16410;old_locus_tag=AB25_1760 NZ_JJMC01000027.1 Protein Homology CDS 121192 122232 . - 0 ID=cds-WP_032170726.1;Parent=gene-AB25_RS16410;Dbxref=GenBank:WP_032170726.1;Name=WP_032170726.1;gbkey=CDS;gene=ydgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310359.2;locus_tag=AB25_RS16410;product=oxidoreductase;protein_id=WP_032170726.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 122475 122600 . + . ID=gene-AB25_RS0125155;Name=blr;gbkey=Gene;gene=blr;gene_biotype=protein_coding;locus_tag=AB25_RS0125155 NZ_JJMC01000027.1 Protein Homology CDS 122475 122600 . + 0 ID=cds-WP_001300888.1;Parent=gene-AB25_RS0125155;Dbxref=GenBank:WP_001300888.1;Name=WP_001300888.1;gbkey=CDS;gene=blr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025303.1;locus_tag=AB25_RS0125155;product=division septum protein Blr;protein_id=WP_001300888.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 122873 123088 . + . ID=gene-AB25_RS16405;Name=ydgT;gbkey=Gene;gene=ydgT;gene_biotype=protein_coding;locus_tag=AB25_RS16405;old_locus_tag=AB25_1761 NZ_JJMC01000027.1 Protein Homology CDS 122873 123088 . + 0 ID=cds-WP_000217950.1;Parent=gene-AB25_RS16405;Dbxref=GenBank:WP_000217950.1;Name=WP_000217950.1;gbkey=CDS;gene=ydgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310361.1;locus_tag=AB25_RS16405;product=transcription modulator YdgT;protein_id=WP_000217950.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 123174 123614 . + . ID=gene-AB25_RS16400;Name=ydgK;gbkey=Gene;gene=ydgK;gene_biotype=protein_coding;locus_tag=AB25_RS16400;old_locus_tag=AB25_1762 NZ_JJMC01000027.1 Protein Homology CDS 123174 123614 . + 0 ID=cds-WP_000214176.1;Parent=gene-AB25_RS16400;Dbxref=GenBank:WP_000214176.1;Name=WP_000214176.1;gbkey=CDS;gene=ydgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707526.2;locus_tag=AB25_RS16400;product=DUF2569 domain-containing protein;protein_id=WP_000214176.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 123691 124272 . + . ID=gene-AB25_RS16395;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=AB25_RS16395;old_locus_tag=AB25_1763 NZ_JJMC01000027.1 Protein Homology CDS 123691 124272 . + 0 ID=cds-WP_000133193.1;Parent=gene-AB25_RS16395;Dbxref=GenBank:WP_000133193.1;Name=WP_000133193.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456621.1;locus_tag=AB25_RS16395;product=electron transport complex subunit RsxA;protein_id=WP_000133193.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 124272 124850 . + . ID=gene-AB25_RS16390;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=AB25_RS16390;old_locus_tag=AB25_1764 NZ_JJMC01000027.1 Protein Homology CDS 124272 124850 . + 0 ID=cds-WP_000991809.1;Parent=gene-AB25_RS16390;Dbxref=GenBank:WP_000991809.1;Name=WP_000991809.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310364.1;locus_tag=AB25_RS16390;product=electron transport complex subunit RsxB;protein_id=WP_000991809.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 124843 126969 . + . ID=gene-AB25_RS16385;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=AB25_RS16385;old_locus_tag=AB25_1765 NZ_JJMC01000027.1 Protein Homology CDS 124843 126969 . + 0 ID=cds-WP_000915770.1;Parent=gene-AB25_RS16385;Dbxref=GenBank:WP_000915770.1;Name=WP_000915770.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416146.1;locus_tag=AB25_RS16385;product=electron transport complex subunit RsxC;protein_id=WP_000915770.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 126970 128028 . + . ID=gene-AB25_RS16380;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=AB25_RS16380;old_locus_tag=AB25_1766 NZ_JJMC01000027.1 Protein Homology CDS 126970 128028 . + 0 ID=cds-WP_000231922.1;Parent=gene-AB25_RS16380;Dbxref=GenBank:WP_000231922.1;Name=WP_000231922.1;Ontology_term=GO:0022900,GO:0055085,GO:0016020;gbkey=CDS;gene=rsxD;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310366.1;locus_tag=AB25_RS16380;product=electron transport complex subunit RsxD;protein_id=WP_000231922.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 128032 128652 . + . ID=gene-AB25_RS16375;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=AB25_RS16375;old_locus_tag=AB25_1767 NZ_JJMC01000027.1 Protein Homology CDS 128032 128652 . + 0 ID=cds-WP_000920784.1;Parent=gene-AB25_RS16375;Dbxref=GenBank:WP_000920784.1;Name=WP_000920784.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0016020;gbkey=CDS;gene=rsxG;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416148.1;locus_tag=AB25_RS16375;product=electron transport complex subunit RsxG;protein_id=WP_000920784.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 128656 129351 . + . ID=gene-AB25_RS16370;Name=rsxE;gbkey=Gene;gene=rsxE;gene_biotype=protein_coding;locus_tag=AB25_RS16370;old_locus_tag=AB25_1768 NZ_JJMC01000027.1 Protein Homology CDS 128656 129351 . + 0 ID=cds-WP_001289652.1;Parent=gene-AB25_RS16370;Dbxref=GenBank:WP_001289652.1;Name=WP_001289652.1;gbkey=CDS;gene=rsxE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416149.1;locus_tag=AB25_RS16370;product=electron transport complex subunit RsxE;protein_id=WP_001289652.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 129351 129986 . + . ID=gene-AB25_RS16365;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=AB25_RS16365;old_locus_tag=AB25_1769 NZ_JJMC01000027.1 Protein Homology CDS 129351 129986 . + 0 ID=cds-WP_001030339.1;Parent=gene-AB25_RS16365;Dbxref=GenBank:WP_001030339.1;Name=WP_001030339.1;Ontology_term=GO:0006284,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416150.1;locus_tag=AB25_RS16365;product=endonuclease III;protein_id=WP_001030339.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 130597 132099 . + . ID=gene-AB25_RS16360;Name=dtpA;gbkey=Gene;gene=dtpA;gene_biotype=protein_coding;locus_tag=AB25_RS16360;old_locus_tag=AB25_1770 NZ_JJMC01000027.1 Protein Homology CDS 130597 132099 . + 0 ID=cds-WP_000100932.1;Parent=gene-AB25_RS16360;Dbxref=GenBank:WP_000100932.1;Name=WP_000100932.1;Ontology_term=GO:0015833,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpA;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416151.1;locus_tag=AB25_RS16360;product=dipeptide/tripeptide permease DtpA;protein_id=WP_000100932.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 132205 132810 . + . ID=gene-AB25_RS16355;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;locus_tag=AB25_RS16355;old_locus_tag=AB25_1771 NZ_JJMC01000027.1 Protein Homology CDS 132205 132810 . + 0 ID=cds-WP_000765748.1;Parent=gene-AB25_RS16355;Dbxref=GenBank:WP_000765748.1;Name=WP_000765748.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=gstA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310371.1;locus_tag=AB25_RS16355;product=glutathione transferase GstA;protein_id=WP_000765748.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 132854 133717 . - . ID=gene-AB25_RS16350;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=AB25_RS16350;old_locus_tag=AB25_1772 NZ_JJMC01000027.1 Protein Homology CDS 132854 133717 . - 0 ID=cds-WP_001307229.1;Parent=gene-AB25_RS16350;Dbxref=GenBank:WP_001307229.1;Name=WP_001307229.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416153.1;locus_tag=AB25_RS16350;product=pyridoxal kinase;protein_id=WP_001307229.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 133776 135050 . - . ID=gene-AB25_RS16345;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=AB25_RS16345;old_locus_tag=AB25_1773 NZ_JJMC01000027.1 Protein Homology CDS 133776 135050 . - 0 ID=cds-WP_001295400.1;Parent=gene-AB25_RS16345;Dbxref=GenBank:WP_001295400.1;Name=WP_001295400.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310373.1;locus_tag=AB25_RS16345;product=tyrosine--tRNA ligase;protein_id=WP_001295400.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 135179 135835 . - . ID=gene-AB25_RS16340;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=AB25_RS16340;old_locus_tag=AB25_1774 NZ_JJMC01000027.1 Protein Homology CDS 135179 135835 . - 0 ID=cds-WP_001282319.1;Parent=gene-AB25_RS16340;Dbxref=GenBank:WP_001282319.1;Name=WP_001282319.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127173.1;locus_tag=AB25_RS16340;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_001282319.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 135894 136223 . - . ID=gene-AB25_RS16335;Name=mliC;gbkey=Gene;gene=mliC;gene_biotype=protein_coding;locus_tag=AB25_RS16335;old_locus_tag=AB25_1775 NZ_JJMC01000027.1 Protein Homology CDS 135894 136223 . - 0 ID=cds-WP_000178044.1;Parent=gene-AB25_RS16335;Dbxref=GenBank:WP_000178044.1;Name=WP_000178044.1;gbkey=CDS;gene=mliC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416156.4;locus_tag=AB25_RS16335;product=C-type lysozyme inhibitor;protein_id=WP_000178044.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 136321 137430 . - . ID=gene-AB25_RS16330;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;locus_tag=AB25_RS16330;old_locus_tag=AB25_1776 NZ_JJMC01000027.1 Protein Homology CDS 136321 137430 . - 0 ID=cds-WP_000835077.1;Parent=gene-AB25_RS16330;Dbxref=GenBank:WP_000835077.1;Name=WP_000835077.1;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416157.1;locus_tag=AB25_RS16330;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_000835077.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 137704 138171 . + . ID=gene-AB25_RS16325;Name=slyB;gbkey=Gene;gene=slyB;gene_biotype=protein_coding;locus_tag=AB25_RS16325;old_locus_tag=AB25_1777 NZ_JJMC01000027.1 Protein Homology CDS 137704 138171 . + 0 ID=cds-WP_000597196.1;Parent=gene-AB25_RS16325;Dbxref=GenBank:WP_000597196.1;Name=WP_000597196.1;gbkey=CDS;gene=slyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310377.1;locus_tag=AB25_RS16325;product=outer membrane lipoprotein SlyB;protein_id=WP_000597196.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 138218 138652 . - . ID=gene-AB25_RS16320;Name=slyA;gbkey=Gene;gene=slyA;gene_biotype=protein_coding;locus_tag=AB25_RS16320;old_locus_tag=AB25_1778 NZ_JJMC01000027.1 Protein Homology CDS 138218 138652 . - 0 ID=cds-WP_001296943.1;Parent=gene-AB25_RS16320;Dbxref=GenBank:WP_001296943.1;Name=WP_001296943.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=slyA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416159.2;locus_tag=AB25_RS16320;product=transcriptional regulator SlyA;protein_id=WP_001296943.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 138853 139089 . + . ID=gene-AB25_RS16315;Name=ydhI;gbkey=Gene;gene=ydhI;gene_biotype=protein_coding;locus_tag=AB25_RS16315;old_locus_tag=AB25_1780 NZ_JJMC01000027.1 Protein Homology CDS 138853 139089 . + 0 ID=cds-WP_000670998.1;Parent=gene-AB25_RS16315;Dbxref=GenBank:WP_000670998.1;Name=WP_000670998.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ydhI;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310379.1;locus_tag=AB25_RS16315;product=DUF1656 domain-containing protein;protein_id=WP_000670998.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 139092 139949 . + . ID=gene-AB25_RS16310;Name=ydhJ;gbkey=Gene;gene=ydhJ;gene_biotype=protein_coding;locus_tag=AB25_RS16310;old_locus_tag=AB25_1781 NZ_JJMC01000027.1 Protein Homology CDS 139092 139949 . + 0 ID=cds-WP_001356269.1;Parent=gene-AB25_RS16310;Dbxref=GenBank:WP_001356269.1;Name=WP_001356269.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;gene=ydhJ;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310380.2;locus_tag=AB25_RS16310;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_001356269.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 139949 141961 . + . ID=gene-AB25_RS16305;Name=ydhK;gbkey=Gene;gene=ydhK;gene_biotype=protein_coding;locus_tag=AB25_RS16305;old_locus_tag=AB25_1782 NZ_JJMC01000027.1 Protein Homology CDS 139949 141961 . + 0 ID=cds-WP_000994333.1;Parent=gene-AB25_RS16305;Dbxref=GenBank:WP_000994333.1;Name=WP_000994333.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;gene=ydhK;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416162.1;locus_tag=AB25_RS16305;product=FUSC family protein;protein_id=WP_000994333.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 141962 142483 . - . ID=gene-AB25_RS16300;Name=sodC;gbkey=Gene;gene=sodC;gene_biotype=protein_coding;locus_tag=AB25_RS16300;old_locus_tag=AB25_1783 NZ_JJMC01000027.1 Protein Homology CDS 141962 142483 . - 0 ID=cds-WP_001296937.1;Parent=gene-AB25_RS16300;Dbxref=GenBank:WP_001296937.1;Name=WP_001296937.1;Ontology_term=GO:0004784;gbkey=CDS;gene=sodC;go_function=superoxide dismutase activity|0004784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310382.1;locus_tag=AB25_RS16300;product=superoxide dismutase [Cu-Zn] SodC;protein_id=WP_001296937.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 142564 143460 . - . ID=gene-AB25_RS16295;Name=ydhF;gbkey=Gene;gene=ydhF;gene_biotype=protein_coding;locus_tag=AB25_RS16295;old_locus_tag=AB25_1784 NZ_JJMC01000027.1 Protein Homology CDS 142564 143460 . - 0 ID=cds-WP_000250668.1;Parent=gene-AB25_RS16295;Dbxref=GenBank:WP_000250668.1;Name=WP_000250668.1;Ontology_term=GO:0016491,GO:0050661;gbkey=CDS;gene=ydhF;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025305.1;locus_tag=AB25_RS16295;product=aldo/keto reductase;protein_id=WP_000250668.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 143509 143748 . - . ID=gene-AB25_RS0125165;Name=ydhL;gbkey=Gene;gene=ydhL;gene_biotype=protein_coding;locus_tag=AB25_RS0125165 NZ_JJMC01000027.1 Protein Homology CDS 143509 143748 . - 0 ID=cds-WP_000840481.1;Parent=gene-AB25_RS0125165;Dbxref=GenBank:WP_000840481.1;Name=WP_000840481.1;gbkey=CDS;gene=ydhL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416165.2;locus_tag=AB25_RS0125165;product=DUF1289 domain-containing protein;protein_id=WP_000840481.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 143851 144450 . + . ID=gene-AB25_RS16290;Name=nemR;gbkey=Gene;gene=nemR;gene_biotype=protein_coding;locus_tag=AB25_RS16290;old_locus_tag=AB25_1786 NZ_JJMC01000027.1 Protein Homology CDS 143851 144450 . + 0 ID=cds-WP_001032936.1;Parent=gene-AB25_RS16290;Dbxref=GenBank:WP_001032936.1;Name=WP_001032936.1;gbkey=CDS;gene=nemR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416166.3;locus_tag=AB25_RS16290;product=DNA-binding transcriptional regulator NemR;protein_id=WP_001032936.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 144487 145584 . + . ID=gene-AB25_RS16285;Name=nemA;gbkey=Gene;gene=nemA;gene_biotype=protein_coding;locus_tag=AB25_RS16285;old_locus_tag=AB25_1787 NZ_JJMC01000027.1 Protein Homology CDS 144487 145584 . + 0 ID=cds-WP_000093582.1;Parent=gene-AB25_RS16285;Dbxref=GenBank:WP_000093582.1;Name=WP_000093582.1;gbkey=CDS;gene=nemA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416167.1;locus_tag=AB25_RS16285;product=N-ethylmaleimide reductase;protein_id=WP_000093582.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 145665 146072 . + . ID=gene-AB25_RS16280;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=AB25_RS16280;old_locus_tag=AB25_1788 NZ_JJMC01000027.1 Protein Homology CDS 145665 146072 . + 0 ID=cds-WP_001237796.1;Parent=gene-AB25_RS16280;Dbxref=GenBank:WP_001237796.1;Name=WP_001237796.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500591.1;locus_tag=AB25_RS16280;product=lactoylglutathione lyase;protein_id=WP_001237796.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 146175 146822 . + . ID=gene-AB25_RS16275;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=AB25_RS16275;old_locus_tag=AB25_1789 NZ_JJMC01000027.1 Protein Homology CDS 146175 146822 . + 0 ID=cds-WP_001282282.1;Parent=gene-AB25_RS16275;Dbxref=GenBank:WP_001282282.1;Name=WP_001282282.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=RNA exonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310388.1;locus_tag=AB25_RS16275;product=ribonuclease T;protein_id=WP_001282282.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 146915 151531 . + . ID=gene-AB25_RS16270;Name=lhr;gbkey=Gene;gene=lhr;gene_biotype=protein_coding;locus_tag=AB25_RS16270;old_locus_tag=AB25_1790 NZ_JJMC01000027.1 Protein Homology CDS 146915 151531 . + 0 ID=cds-WP_001323973.1;Parent=gene-AB25_RS16270;Dbxref=GenBank:WP_001323973.1;Name=WP_001323973.1;Ontology_term=GO:0003676,GO:0005524,GO:0016818;gbkey=CDS;gene=lhr;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416170.1;locus_tag=AB25_RS16270;product=ATP-dependent helicase;protein_id=WP_001323973.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 151582 151929 . - . ID=gene-AB25_RS16265;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=AB25_RS16265;old_locus_tag=AB25_1791 NZ_JJMC01000027.1 Protein Homology CDS 151582 151929 . - 0 ID=cds-WP_000108172.1;Parent=gene-AB25_RS16265;Dbxref=GenBank:WP_000108172.1;Name=WP_000108172.1;gbkey=CDS;gene=grxD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310390.1;locus_tag=AB25_RS16265;product=monothiol glutaredoxin 4;protein_id=WP_000108172.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 152263 153078 . + . ID=gene-AB25_RS16260;Name=mepH;gbkey=Gene;gene=mepH;gene_biotype=protein_coding;locus_tag=AB25_RS16260;old_locus_tag=AB25_1793 NZ_JJMC01000027.1 Protein Homology CDS 152263 153078 . + 0 ID=cds-WP_000101193.1;Parent=gene-AB25_RS16260;Dbxref=GenBank:WP_000101193.1;Name=WP_000101193.1;gbkey=CDS;gene=mepH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416172.1;locus_tag=AB25_RS16260;product=peptidoglycan DD-endopeptidase MepH;protein_id=WP_000101193.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 153206 153787 . + . ID=gene-AB25_RS16255;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=AB25_RS16255;old_locus_tag=AB25_1794 NZ_JJMC01000027.1 Protein Homology CDS 153206 153787 . + 0 ID=cds-WP_000007283.1;Parent=gene-AB25_RS16255;Dbxref=GenBank:WP_000007283.1;Name=WP_000007283.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;gene=sodB;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310392.1;locus_tag=AB25_RS16255;product=superoxide dismutase [Fe];protein_id=WP_000007283.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 153933 155102 . - . ID=gene-AB25_RS16250;Name=ydhP;gbkey=Gene;gene=ydhP;gene_biotype=protein_coding;locus_tag=AB25_RS16250;old_locus_tag=AB25_1795 NZ_JJMC01000027.1 Protein Homology CDS 153933 155102 . - 0 ID=cds-WP_000701040.1;Parent=gene-AB25_RS16250;Dbxref=GenBank:WP_000701040.1;Name=WP_000701040.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;gene=ydhP;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416174.1;locus_tag=AB25_RS16250;product=MFS transporter;protein_id=WP_000701040.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 155268 155357 . - . ID=gene-AB25_RS0125170;Name=cydH;gbkey=Gene;gene=cydH;gene_biotype=protein_coding;gene_synonym=ynhF;locus_tag=AB25_RS0125170;old_locus_tag=AB25_1796 NZ_JJMC01000027.1 Protein Homology CDS 155268 155357 . - 0 ID=cds-WP_000102278.1;Parent=gene-AB25_RS0125170;Dbxref=GenBank:WP_000102278.1;Name=WP_000102278.1;gbkey=CDS;gene=cydH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165321.1;locus_tag=AB25_RS0125170;product=cytochrome bd-I accessory subunit CydH;protein_id=WP_000102278.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 155656 156681 . + . ID=gene-AB25_RS16245;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=AB25_RS16245;old_locus_tag=AB25_1797 NZ_JJMC01000027.1 Protein Homology CDS 155656 156681 . + 0 ID=cds-WP_000190982.1;Parent=gene-AB25_RS16245;Dbxref=GenBank:WP_000190982.1;Name=WP_000190982.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127190.1;locus_tag=AB25_RS16245;product=HTH-type transcriptional repressor PurR;protein_id=WP_000190982.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 156678 157610 . - . ID=gene-AB25_RS16240;Name=punR;gbkey=Gene;gene=punR;gene_biotype=protein_coding;locus_tag=AB25_RS16240;old_locus_tag=AB25_1798 NZ_JJMC01000027.1 Protein Homology CDS 156678 157610 . - 0 ID=cds-WP_000269482.1;Parent=gene-AB25_RS16240;Dbxref=GenBank:WP_000269482.1;Name=WP_000269482.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=punR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310395.1;locus_tag=AB25_RS16240;product=DNA-binding transcriptional activator PunR;protein_id=WP_000269482.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 157723 158934 . + . ID=gene-AB25_RS16235;Name=punC;gbkey=Gene;gene=punC;gene_biotype=protein_coding;gene_synonym=ydhC;locus_tag=AB25_RS16235;old_locus_tag=AB25_1799 NZ_JJMC01000027.1 Protein Homology CDS 157723 158934 . + 0 ID=cds-WP_001182363.1;Parent=gene-AB25_RS16235;Dbxref=GenBank:WP_001182363.1;Name=WP_001182363.1;Ontology_term=GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310396.1;locus_tag=AB25_RS16235;product=purine nucleoside transporter PunC;protein_id=WP_001182363.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 159225 160373 . + . ID=gene-AB25_RS16230;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=AB25_RS16230;old_locus_tag=AB25_1800 NZ_JJMC01000027.1 Protein Homology CDS 159225 160373 . + 0 ID=cds-WP_000098911.1;Parent=gene-AB25_RS16230;Dbxref=GenBank:WP_000098911.1;Name=WP_000098911.1;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416178.1;locus_tag=AB25_RS16230;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WP_000098911.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 160413 161054 . - . ID=gene-AB25_RS16225;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=AB25_RS16225;old_locus_tag=AB25_1801 NZ_JJMC01000027.1 Protein Homology CDS 160413 161054 . - 0 ID=cds-WP_000493947.1;Parent=gene-AB25_RS16225;Dbxref=GenBank:WP_000493947.1;Name=WP_000493947.1;Ontology_term=GO:0004746;gbkey=CDS;gene=ribE;go_function=riboflavin synthase activity|0004746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416179.1;locus_tag=AB25_RS16225;product=riboflavin synthase;protein_id=WP_000493947.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 161269 162642 . + . ID=gene-AB25_RS16220;Name=mdtK;gbkey=Gene;gene=mdtK;gene_biotype=protein_coding;locus_tag=AB25_RS16220;old_locus_tag=AB25_1802 NZ_JJMC01000027.1 Protein Homology CDS 161269 162642 . + 0 ID=cds-WP_001174942.1;Parent=gene-AB25_RS16220;Dbxref=GenBank:WP_001174942.1;Name=WP_001174942.1;gbkey=CDS;gene=mdtK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025307.1;locus_tag=AB25_RS16220;product=multidrug efflux MATE transporter MdtK;protein_id=WP_001174942.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 162683 163939 . - . ID=gene-AB25_RS16215;Name=ydhQ;gbkey=Gene;gene=ydhQ;gene_biotype=protein_coding;locus_tag=AB25_RS16215;old_locus_tag=AB25_1803 NZ_JJMC01000027.1 Protein Homology CDS 162683 163939 . - 0 ID=cds-WP_000534291.1;Parent=gene-AB25_RS16215;Dbxref=GenBank:WP_000534291.1;Name=WP_000534291.1;gbkey=CDS;gene=ydhQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416181.1;locus_tag=AB25_RS16215;product=AIDA repeat-containing protein;protein_id=WP_000534291.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 164247 164323 . + . ID=gene-AB25_RS16210;Name=AB25_RS16210;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS16210;old_locus_tag=AB25_1804 NZ_JJMC01000027.1 tRNAscan-SE tRNA 164247 164323 . + . ID=rna-AB25_RS16210;Parent=gene-AB25_RS16210;anticodon=(pos:164281..164283);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS16210;product=tRNA-Val NZ_JJMC01000027.1 tRNAscan-SE exon 164247 164323 . + . ID=exon-AB25_RS16210-1;Parent=rna-AB25_RS16210;anticodon=(pos:164281..164283);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS16210;product=tRNA-Val NZ_JJMC01000027.1 RefSeq gene 164328 164404 . + . ID=gene-AB25_RS16205;Name=AB25_RS16205;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS16205;old_locus_tag=AB25_1805 NZ_JJMC01000027.1 tRNAscan-SE tRNA 164328 164404 . + . ID=rna-AB25_RS16205;Parent=gene-AB25_RS16205;anticodon=(pos:164362..164364);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS16205;product=tRNA-Val NZ_JJMC01000027.1 tRNAscan-SE exon 164328 164404 . + . ID=exon-AB25_RS16205-1;Parent=rna-AB25_RS16205;anticodon=(pos:164362..164364);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS16205;product=tRNA-Val NZ_JJMC01000027.1 RefSeq gene 164512 164817 . + . ID=gene-AB25_RS16200;Name=ydhR;gbkey=Gene;gene=ydhR;gene_biotype=protein_coding;locus_tag=AB25_RS16200;old_locus_tag=AB25_1806 NZ_JJMC01000027.1 Protein Homology CDS 164512 164817 . + 0 ID=cds-WP_000212657.1;Parent=gene-AB25_RS16200;Dbxref=GenBank:WP_000212657.1;Name=WP_000212657.1;gbkey=CDS;gene=ydhR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416182.1;locus_tag=AB25_RS16200;product=monooxygenase;protein_id=WP_000212657.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 164943 166547 . + . ID=gene-AB25_RS16195;Name=ydhS;gbkey=Gene;gene=ydhS;gene_biotype=protein_coding;locus_tag=AB25_RS16195;old_locus_tag=AB25_1807 NZ_JJMC01000027.1 Protein Homology CDS 164943 166547 . + 0 ID=cds-WP_000716929.1;Parent=gene-AB25_RS16195;Dbxref=GenBank:WP_000716929.1;Name=WP_000716929.1;gbkey=CDS;gene=ydhS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416183.1;locus_tag=AB25_RS16195;product=FAD-NAD(P)-binding protein;protein_id=WP_000716929.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 166559 167371 . - . ID=gene-AB25_RS16190;Name=ydhT;gbkey=Gene;gene=ydhT;gene_biotype=protein_coding;locus_tag=AB25_RS16190;old_locus_tag=AB25_1808 NZ_JJMC01000027.1 Protein Homology CDS 166559 167371 . - 0 ID=cds-WP_000587555.1;Parent=gene-AB25_RS16190;Dbxref=GenBank:WP_000587555.1;Name=WP_000587555.1;gbkey=CDS;gene=ydhT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416184.1;locus_tag=AB25_RS16190;product=protein YdhT;protein_id=WP_000587555.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 167375 168160 . - . ID=gene-AB25_RS16185;Name=phsC;gbkey=Gene;gene=phsC;gene_biotype=protein_coding;locus_tag=AB25_RS16185;old_locus_tag=AB25_1809 NZ_JJMC01000027.1 Protein Homology CDS 167375 168160 . - 0 ID=cds-WP_001069997.1;Parent=gene-AB25_RS16185;Dbxref=GenBank:WP_001069997.1;Name=WP_001069997.1;gbkey=CDS;gene=phsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310404.1;locus_tag=AB25_RS16185;product=thiosulfate reductase cytochrome B subunit;protein_id=WP_001069997.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 168157 168825 . - . ID=gene-AB25_RS16180;Name=ydhX;gbkey=Gene;gene=ydhX;gene_biotype=protein_coding;locus_tag=AB25_RS16180;old_locus_tag=AB25_1810 NZ_JJMC01000027.1 Protein Homology CDS 168157 168825 . - 0 ID=cds-WP_001310861.1;Parent=gene-AB25_RS16180;Dbxref=GenBank:WP_001310861.1;Name=WP_001310861.1;gbkey=CDS;gene=ydhX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416186.4;locus_tag=AB25_RS16180;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_001310861.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 168889 169527 . - . ID=gene-AB25_RS16175;Name=ydhW;gbkey=Gene;gene=ydhW;gene_biotype=protein_coding;locus_tag=AB25_RS16175;old_locus_tag=AB25_1811 NZ_JJMC01000027.1 Protein Homology CDS 168889 169527 . - 0 ID=cds-WP_001297805.1;Parent=gene-AB25_RS16175;Dbxref=GenBank:WP_001297805.1;Name=WP_001297805.1;gbkey=CDS;gene=ydhW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707570.2;locus_tag=AB25_RS16175;product=YdhW family putative oxidoreductase system protein;protein_id=WP_001297805.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 169540 171642 . - . ID=gene-AB25_RS16170;Name=ydhV;gbkey=Gene;gene=ydhV;gene_biotype=protein_coding;locus_tag=AB25_RS16170;old_locus_tag=AB25_1812 NZ_JJMC01000027.1 Protein Homology CDS 169540 171642 . - 0 ID=cds-WP_001273518.1;Parent=gene-AB25_RS16170;Dbxref=GenBank:WP_001273518.1;Name=WP_001273518.1;Ontology_term=GO:0009055,GO:0016491,GO:0051536;gbkey=CDS;gene=ydhV;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016246021.1;locus_tag=AB25_RS16170;product=aldehyde ferredoxin oxidoreductase;protein_id=WP_001273518.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 171663 172289 . - . ID=gene-AB25_RS16165;Name=ydhY;gbkey=Gene;gene=ydhY;gene_biotype=protein_coding;locus_tag=AB25_RS16165;old_locus_tag=AB25_1813 NZ_JJMC01000027.1 Protein Homology CDS 171663 172289 . - 0 ID=cds-WP_001070230.1;Parent=gene-AB25_RS16165;Dbxref=GenBank:WP_001070230.1;Name=WP_001070230.1;gbkey=CDS;gene=ydhY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310408.1;locus_tag=AB25_RS16165;product=ferredoxin-like protein;protein_id=WP_001070230.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 172745 172954 . - . ID=gene-AB25_RS16160;Name=fumD;gbkey=Gene;gene=fumD;gene_biotype=protein_coding;locus_tag=AB25_RS16160;old_locus_tag=AB25_1815 NZ_JJMC01000027.1 Protein Homology CDS 172745 172954 . - 0 ID=cds-WP_000528342.1;Parent=gene-AB25_RS16160;Dbxref=GenBank:WP_000528342.1;Name=WP_000528342.1;gbkey=CDS;gene=fumD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310409.1;locus_tag=AB25_RS16160;product=fumarate hydratase FumD;protein_id=WP_000528342.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 173308 173502 . + . ID=gene-AB25_RS32405;Name=AB25_RS32405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32405 NZ_JJMC01000027.1 Protein Homology CDS 173308 173502 . + 0 ID=cds-WP_240806354.1;Parent=gene-AB25_RS32405;Dbxref=GenBank:WP_240806354.1;Name=WP_240806354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010283910.1;locus_tag=AB25_RS32405;product=protein YnhH;protein_id=WP_240806354.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 173510 174922 . + . ID=gene-AB25_RS16155;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=protein_coding;locus_tag=AB25_RS16155;old_locus_tag=AB25_1816 NZ_JJMC01000027.1 Protein Homology CDS 173510 174922 . + 0 ID=cds-WP_001295403.1;Parent=gene-AB25_RS16155;Dbxref=GenBank:WP_001295403.1;Name=WP_001295403.1;Ontology_term=GO:0006096,GO:0004743;gbkey=CDS;gene=pykF;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=AB25_RS16155;product=pyruvate kinase PykF;protein_id=WP_001295403.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 175233 175469 . + . ID=gene-AB25_RS16150;Name=lpp;gbkey=Gene;gene=lpp;gene_biotype=protein_coding;locus_tag=AB25_RS16150;old_locus_tag=AB25_1817 NZ_JJMC01000027.1 Protein Homology CDS 175233 175469 . + 0 ID=cds-WP_000648420.1;Parent=gene-AB25_RS16150;Dbxref=GenBank:WP_000648420.1;Name=WP_000648420.1;gbkey=CDS;gene=lpp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310411.1;locus_tag=AB25_RS16150;product=murein lipoprotein Lpp;protein_id=WP_000648420.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 175533 176537 . - . ID=gene-AB25_RS16145;Name=ldtE;gbkey=Gene;gene=ldtE;gene_biotype=protein_coding;locus_tag=AB25_RS16145;old_locus_tag=AB25_1818 NZ_JJMC01000027.1 Protein Homology CDS 175533 176537 . - 0 ID=cds-WP_000817104.1;Parent=gene-AB25_RS16145;Dbxref=GenBank:WP_000817104.1;Name=WP_000817104.1;Ontology_term=GO:0009252,GO:0018104,GO:0016757,GO:0071972;gbkey=CDS;gene=ldtE;go_function=glycosyltransferase activity|0016757||IEA,peptidoglycan L%2CD-transpeptidase activity|0071972||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,peptidoglycan-protein cross-linking|0018104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707577.1;locus_tag=AB25_RS16145;product=L%2CD-transpeptidase LdtE;protein_id=WP_000817104.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 176686 177102 . - . ID=gene-AB25_RS16140;Name=sufE;gbkey=Gene;gene=sufE;gene_biotype=protein_coding;locus_tag=AB25_RS16140;old_locus_tag=AB25_1819 NZ_JJMC01000027.1 Protein Homology CDS 176686 177102 . - 0 ID=cds-WP_001196530.1;Parent=gene-AB25_RS16140;Dbxref=GenBank:WP_001196530.1;Name=WP_001196530.1;gbkey=CDS;gene=sufE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416194.1;locus_tag=AB25_RS16140;product=cysteine desulfuration protein SufE;protein_id=WP_001196530.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 177115 178335 . - . ID=gene-AB25_RS16135;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=AB25_RS16135;old_locus_tag=AB25_1820 NZ_JJMC01000027.1 Protein Homology CDS 177115 178335 . - 0 ID=cds-WP_000144575.1;Parent=gene-AB25_RS16135;Dbxref=GenBank:WP_000144575.1;Name=WP_000144575.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;gene=sufS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310414.1;locus_tag=AB25_RS16135;product=cysteine desulfurase SufS;protein_id=WP_000144575.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 178332 179603 . - . ID=gene-AB25_RS16130;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=AB25_RS16130;old_locus_tag=AB25_1821 NZ_JJMC01000027.1 Protein Homology CDS 178332 179603 . - 0 ID=cds-WP_000908012.1;Parent=gene-AB25_RS16130;Dbxref=GenBank:WP_000908012.1;Name=WP_000908012.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707580.1;locus_tag=AB25_RS16130;product=Fe-S cluster assembly protein SufD;protein_id=WP_000908012.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 179578 180324 . - . ID=gene-AB25_RS16125;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=AB25_RS16125;old_locus_tag=AB25_1822 NZ_JJMC01000027.1 Protein Homology CDS 179578 180324 . - 0 ID=cds-WP_000948878.1;Parent=gene-AB25_RS16125;Dbxref=GenBank:WP_000948878.1;Name=WP_000948878.1;Ontology_term=GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500629.1;locus_tag=AB25_RS16125;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_000948878.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 180334 181821 . - . ID=gene-AB25_RS16120;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=AB25_RS16120;old_locus_tag=AB25_1823 NZ_JJMC01000027.1 Protein Homology CDS 180334 181821 . - 0 ID=cds-WP_000089364.1;Parent=gene-AB25_RS16120;Dbxref=GenBank:WP_000089364.1;Name=WP_000089364.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416198.2;locus_tag=AB25_RS16120;product=Fe-S cluster assembly protein SufB;protein_id=WP_000089364.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 181830 182198 . - . ID=gene-AB25_RS16115;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=AB25_RS16115;old_locus_tag=AB25_1824 NZ_JJMC01000027.1 Protein Homology CDS 181830 182198 . - 0 ID=cds-WP_000367160.1;Parent=gene-AB25_RS16115;Dbxref=GenBank:WP_000367160.1;Name=WP_000367160.1;gbkey=CDS;gene=sufA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416199.1;locus_tag=AB25_RS16115;product=Fe-S cluster assembly scaffold SufA;protein_id=WP_000367160.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 182747 182935 . - . ID=gene-AB25_RS16110;Name=ydiH;gbkey=Gene;gene=ydiH;gene_biotype=protein_coding;locus_tag=AB25_RS16110;old_locus_tag=AB25_1825 NZ_JJMC01000027.1 Protein Homology CDS 182747 182935 . - 0 ID=cds-WP_001296104.1;Parent=gene-AB25_RS16110;Dbxref=GenBank:WP_001296104.1;Name=WP_001296104.1;gbkey=CDS;gene=ydiH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416200.2;locus_tag=AB25_RS16110;product=YdiH family protein;protein_id=WP_001296104.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 183035 183445 . - . ID=gene-AB25_RS16105;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=AB25_RS16105;old_locus_tag=AB25_1826 NZ_JJMC01000027.1 Protein Homology CDS 183035 183445 . - 0 ID=cds-WP_000637982.1;Parent=gene-AB25_RS16105;Dbxref=GenBank:WP_000637982.1;Name=WP_000637982.1;gbkey=CDS;gene=menI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416201.1;locus_tag=AB25_RS16105;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase;protein_id=WP_000637982.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 183442 186498 . - . ID=gene-AB25_RS16100;Name=ydiJ;gbkey=Gene;gene=ydiJ;gene_biotype=protein_coding;locus_tag=AB25_RS16100;old_locus_tag=AB25_1827 NZ_JJMC01000027.1 Protein Homology CDS 183442 186498 . - 0 ID=cds-WP_000612968.1;Parent=gene-AB25_RS16100;Dbxref=GenBank:WP_000612968.1;Name=WP_000612968.1;Ontology_term=GO:1903457,GO:0008720,GO:0046872;gbkey=CDS;gene=ydiJ;go_function=D-lactate dehydrogenase activity|0008720||IEA,metal ion binding|0046872||IEA;go_process=lactate catabolic process|1903457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310421.1;locus_tag=AB25_RS16100;product=D-2-hydroxyglutarate dehydrogenase YdiJ;protein_id=WP_000612968.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 186887 187999 . + . ID=gene-AB25_RS16095;Name=ydiK;gbkey=Gene;gene=ydiK;gene_biotype=protein_coding;locus_tag=AB25_RS16095;old_locus_tag=AB25_1828 NZ_JJMC01000027.1 Protein Homology CDS 186887 187999 . + 0 ID=cds-WP_000248636.1;Parent=gene-AB25_RS16095;Dbxref=GenBank:WP_000248636.1;Name=WP_000248636.1;gbkey=CDS;gene=ydiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416203.1;locus_tag=AB25_RS16095;product=AI-2E family transporter YdiK;protein_id=WP_000248636.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 188185 188292 . + . ID=gene-AB25_RS27345;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=antisense_RNA;locus_tag=AB25_RS27345 NZ_JJMC01000027.1 cmsearch antisense_RNA 188185 188292 . + . ID=rna-AB25_RS27345;Parent=gene-AB25_RS27345;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS27345;product=antisense sRNA RprA NZ_JJMC01000027.1 cmsearch exon 188185 188292 . + . ID=exon-AB25_RS27345-1;Parent=rna-AB25_RS27345;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS27345;product=antisense sRNA RprA NZ_JJMC01000027.1 RefSeq gene 188428 188784 . + . ID=gene-AB25_RS16090;Name=ydiL;gbkey=Gene;gene=ydiL;gene_biotype=protein_coding;locus_tag=AB25_RS16090;old_locus_tag=AB25_1829 NZ_JJMC01000027.1 Protein Homology CDS 188428 188784 . + 0 ID=cds-WP_001310864.1;Parent=gene-AB25_RS16090;Dbxref=GenBank:WP_001310864.1;Name=WP_001310864.1;gbkey=CDS;gene=ydiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416204.2;locus_tag=AB25_RS16090;product=YdiL family protein;protein_id=WP_001310864.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 188884 190098 . + . ID=gene-AB25_RS16085;Name=ydiM;gbkey=Gene;gene=ydiM;gene_biotype=protein_coding;locus_tag=AB25_RS16085;old_locus_tag=AB25_1830 NZ_JJMC01000027.1 Protein Homology CDS 188884 190098 . + 0 ID=cds-WP_032170738.1;Parent=gene-AB25_RS16085;Dbxref=GenBank:WP_032170738.1;Name=WP_032170738.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydiM;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310424.1;locus_tag=AB25_RS16085;product=MFS transporter;protein_id=WP_032170738.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 190325 191590 . + . ID=gene-AB25_RS16080;Name=ydiN;gbkey=Gene;gene=ydiN;gene_biotype=protein_coding;locus_tag=AB25_RS16080;old_locus_tag=AB25_1831 NZ_JJMC01000027.1 Protein Homology CDS 190325 191590 . + 0 ID=cds-WP_001392208.1;Parent=gene-AB25_RS16080;Dbxref=GenBank:WP_001392208.1;Name=WP_001392208.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydiN;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310425.2;locus_tag=AB25_RS16080;product=MFS transporter;protein_id=WP_001392208.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 191602 192468 . + . ID=gene-AB25_RS16075;Name=ydiB;gbkey=Gene;gene=ydiB;gene_biotype=protein_coding;locus_tag=AB25_RS16075;old_locus_tag=AB25_1832 NZ_JJMC01000027.1 Protein Homology CDS 191602 192468 . + 0 ID=cds-WP_000383469.1;Parent=gene-AB25_RS16075;Dbxref=GenBank:WP_000383469.1;Name=WP_000383469.1;gbkey=CDS;gene=ydiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416207.1;locus_tag=AB25_RS16075;product=quinate/shikimate dehydrogenase;protein_id=WP_000383469.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 192499 193257 . + . ID=gene-AB25_RS16070;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=AB25_RS16070;old_locus_tag=AB25_1833 NZ_JJMC01000027.1 Protein Homology CDS 192499 193257 . + 0 ID=cds-WP_000860181.1;Parent=gene-AB25_RS16070;Dbxref=GenBank:WP_000860181.1;Name=WP_000860181.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310427.1;locus_tag=AB25_RS16070;product=type I 3-dehydroquinate dehydratase;protein_id=WP_000860181.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 193402 194997 . + . ID=gene-AB25_RS16065;Name=ydiF;gbkey=Gene;gene=ydiF;gene_biotype=protein_coding;locus_tag=AB25_RS16065;old_locus_tag=AB25_1834 NZ_JJMC01000027.1 Protein Homology CDS 193402 194997 . + 0 ID=cds-WP_000805691.1;Parent=gene-AB25_RS16065;Dbxref=GenBank:WP_000805691.1;Name=WP_000805691.1;gbkey=CDS;gene=ydiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310428.1;locus_tag=AB25_RS16065;product=acyl CoA:acetate/3-ketoacid CoA transferase;protein_id=WP_000805691.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 195011 196162 . + . ID=gene-AB25_RS16060;Name=ydiO;gbkey=Gene;gene=ydiO;gene_biotype=protein_coding;locus_tag=AB25_RS16060;old_locus_tag=AB25_1835 NZ_JJMC01000027.1 Protein Homology CDS 195011 196162 . + 0 ID=cds-WP_000347850.1;Parent=gene-AB25_RS16060;Dbxref=GenBank:WP_000347850.1;Name=WP_000347850.1;gbkey=CDS;gene=ydiO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310429.2;locus_tag=AB25_RS16060;product=acyl-CoA dehydrogenase;protein_id=WP_000347850.1;transl_table=11 NZ_JJMC01000027.1 RefSeq pseudogene 196205 197116 . - . ID=gene-AB25_RS0125175;Name=ydiP;gbkey=Gene;gene=ydiP;gene_biotype=pseudogene;locus_tag=AB25_RS0125175;pseudo=true NZ_JJMC01000027.1 Protein Homology CDS 196205 197116 . - 0 ID=cds-AB25_RS0125175;Parent=gene-AB25_RS0125175;Note=internal stop;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=ydiP;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416211.1;locus_tag=AB25_RS0125175;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 197432 198196 . + . ID=gene-AB25_RS16050;Name=ydiQ;gbkey=Gene;gene=ydiQ;gene_biotype=protein_coding;locus_tag=AB25_RS16050;old_locus_tag=AB25_1839 NZ_JJMC01000027.1 Protein Homology CDS 197432 198196 . + 0 ID=cds-WP_000692169.1;Parent=gene-AB25_RS16050;Dbxref=GenBank:WP_000692169.1;Name=WP_000692169.1;gbkey=CDS;gene=ydiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416212.1;locus_tag=AB25_RS16050;product=electron transfer flavoprotein;protein_id=WP_000692169.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 198216 199154 . + . ID=gene-AB25_RS16045;Name=ydiR;gbkey=Gene;gene=ydiR;gene_biotype=protein_coding;locus_tag=AB25_RS16045;old_locus_tag=AB25_1840 NZ_JJMC01000027.1 Protein Homology CDS 198216 199154 . + 0 ID=cds-WP_000080700.1;Parent=gene-AB25_RS16045;Dbxref=GenBank:WP_000080700.1;Name=WP_000080700.1;gbkey=CDS;gene=ydiR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310432.1;locus_tag=AB25_RS16045;product=electron transfer flavoprotein subunit alpha;protein_id=WP_000080700.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 199210 200499 . + . ID=gene-AB25_RS16040;Name=ydiS;gbkey=Gene;gene=ydiS;gene_biotype=protein_coding;locus_tag=AB25_RS16040;old_locus_tag=AB25_1841 NZ_JJMC01000027.1 Protein Homology CDS 199210 200499 . + 0 ID=cds-WP_001278502.1;Parent=gene-AB25_RS16040;Dbxref=GenBank:WP_001278502.1;Name=WP_001278502.1;gbkey=CDS;gene=ydiS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310433.1;locus_tag=AB25_RS16040;product=FAD-dependent oxidoreductase;protein_id=WP_001278502.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 200496 200789 . + . ID=gene-AB25_RS16035;Name=ydiT;gbkey=Gene;gene=ydiT;gene_biotype=protein_coding;locus_tag=AB25_RS16035;old_locus_tag=AB25_1842 NZ_JJMC01000027.1 Protein Homology CDS 200496 200789 . + 0 ID=cds-WP_032170740.1;Parent=gene-AB25_RS16035;Dbxref=GenBank:WP_032170740.1;Name=WP_032170740.1;gbkey=CDS;gene=ydiT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310434.1;locus_tag=AB25_RS16035;product=ferredoxin family protein;protein_id=WP_032170740.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 200846 202492 . + . ID=gene-AB25_RS16030;Name=fadK;gbkey=Gene;gene=fadK;gene_biotype=protein_coding;locus_tag=AB25_RS16030;old_locus_tag=AB25_1843 NZ_JJMC01000027.1 Protein Homology CDS 200846 202492 . + 0 ID=cds-WP_001356268.1;Parent=gene-AB25_RS16030;Dbxref=GenBank:WP_001356268.1;Name=WP_001356268.1;gbkey=CDS;gene=fadK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310435.2;locus_tag=AB25_RS16030;product=medium-chain fatty-acid--CoA ligase;protein_id=WP_001356268.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 202549 204927 . - . ID=gene-AB25_RS16025;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=AB25_RS16025;old_locus_tag=AB25_1844 NZ_JJMC01000027.1 Protein Homology CDS 202549 204927 . - 0 ID=cds-WP_000069386.1;Parent=gene-AB25_RS16025;Dbxref=GenBank:WP_000069386.1;Name=WP_000069386.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416217.1;locus_tag=AB25_RS16025;product=phosphoenolpyruvate synthase;protein_id=WP_000069386.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 205260 206093 . + . ID=gene-AB25_RS16020;Name=ppsR;gbkey=Gene;gene=ppsR;gene_biotype=protein_coding;locus_tag=AB25_RS16020;old_locus_tag=AB25_1845 NZ_JJMC01000027.1 Protein Homology CDS 205260 206093 . + 0 ID=cds-WP_000426520.1;Parent=gene-AB25_RS16020;Dbxref=GenBank:WP_000426520.1;Name=WP_000426520.1;Ontology_term=GO:0004674,GO:0005524,GO:0016776,GO:0043531;gbkey=CDS;gene=ppsR;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,ADP binding|0043531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310437.1;locus_tag=AB25_RS16020;product=posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR;protein_id=WP_000426520.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 206250 207296 . + . ID=gene-AB25_RS16015;Name=aroH;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;locus_tag=AB25_RS16015;old_locus_tag=AB25_1846 NZ_JJMC01000027.1 Protein Homology CDS 206250 207296 . + 0 ID=cds-WP_001082237.1;Parent=gene-AB25_RS16015;Dbxref=GenBank:WP_001082237.1;Name=WP_001082237.1;gbkey=CDS;gene=aroH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310438.1;locus_tag=AB25_RS16015;product=3-deoxy-7-phosphoheptulonate synthase AroH;protein_id=WP_001082237.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 207428 207619 . + . ID=gene-AB25_RS16010;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=AB25_RS16010;old_locus_tag=AB25_1847 NZ_JJMC01000027.1 Protein Homology CDS 207428 207619 . + 0 ID=cds-WP_001270809.1;Parent=gene-AB25_RS16010;Dbxref=GenBank:WP_001270809.1;Name=WP_001270809.1;gbkey=CDS;gene=hemP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310439.1;locus_tag=AB25_RS16010;product=hemin uptake protein HemP;protein_id=WP_001270809.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 207623 209059 . - . ID=gene-AB25_RS16005;Name=selO;gbkey=Gene;gene=selO;gene_biotype=protein_coding;locus_tag=AB25_RS16005;old_locus_tag=AB25_1848 NZ_JJMC01000027.1 Protein Homology CDS 207623 209059 . - 0 ID=cds-WP_000175705.1;Parent=gene-AB25_RS16005;Dbxref=GenBank:WP_000175705.1;Name=WP_000175705.1;Ontology_term=GO:0018117,GO:0005524,GO:0070733;gbkey=CDS;gene=selO;go_function=ATP binding|0005524||IEA,AMPylase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416221.1;locus_tag=AB25_RS16005;product=protein adenylyltransferase SelO;protein_id=WP_000175705.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 209122 209835 . - . ID=gene-AB25_RS16000;Name=ydiV;gbkey=Gene;gene=ydiV;gene_biotype=protein_coding;locus_tag=AB25_RS16000;old_locus_tag=AB25_1849 NZ_JJMC01000027.1 Protein Homology CDS 209122 209835 . - 0 ID=cds-WP_001300634.1;Parent=gene-AB25_RS16000;Dbxref=GenBank:WP_001300634.1;Name=WP_001300634.1;gbkey=CDS;gene=ydiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416222.1;locus_tag=AB25_RS16000;product=anti-FlhDC factor;protein_id=WP_001300634.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 210082 210546 . - . ID=gene-AB25_RS15995;Name=nlpC;gbkey=Gene;gene=nlpC;gene_biotype=protein_coding;locus_tag=AB25_RS15995;old_locus_tag=AB25_1850 NZ_JJMC01000027.1 Protein Homology CDS 210082 210546 . - 0 ID=cds-WP_001209795.1;Parent=gene-AB25_RS15995;Dbxref=GenBank:WP_001209795.1;Name=WP_001209795.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;gene=nlpC;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416223.1;locus_tag=AB25_RS15995;product=C40 family peptidase;protein_id=WP_001209795.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 210624 211373 . - . ID=gene-AB25_RS15990;Name=btuD;gbkey=Gene;gene=btuD;gene_biotype=protein_coding;locus_tag=AB25_RS15990;old_locus_tag=AB25_1851 NZ_JJMC01000027.1 Protein Homology CDS 210624 211373 . - 0 ID=cds-WP_000029479.1;Parent=gene-AB25_RS15990;Dbxref=GenBank:WP_000029479.1;Name=WP_000029479.1;Ontology_term=GO:0015889,GO:0005524;gbkey=CDS;gene=btuD;go_function=ATP binding|0005524||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707405.1;locus_tag=AB25_RS15990;product=vitamin B12 ABC transporter ATP-binding protein BtuD;protein_id=WP_000029479.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 211373 211924 . - . ID=gene-AB25_RS15985;Name=btuE;gbkey=Gene;gene=btuE;gene_biotype=protein_coding;locus_tag=AB25_RS15985;old_locus_tag=AB25_1852 NZ_JJMC01000027.1 Protein Homology CDS 211373 211924 . - 0 ID=cds-WP_001154187.1;Parent=gene-AB25_RS15985;Dbxref=GenBank:WP_001154187.1;Name=WP_001154187.1;gbkey=CDS;gene=btuE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310444.1;locus_tag=AB25_RS15985;product=bifunctional thioredoxin/glutathione peroxidase;protein_id=WP_001154187.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 211987 212967 . - . ID=gene-AB25_RS15980;Name=btuC;gbkey=Gene;gene=btuC;gene_biotype=protein_coding;locus_tag=AB25_RS15980;old_locus_tag=AB25_1853 NZ_JJMC01000027.1 Protein Homology CDS 211987 212967 . - 0 ID=cds-WP_000956529.1;Parent=gene-AB25_RS15980;Dbxref=GenBank:WP_000956529.1;Name=WP_000956529.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;gene=btuC;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416226.1;locus_tag=AB25_RS15980;product=vitamin B12 ABC transporter permease BtuC;protein_id=WP_000956529.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 213068 213367 . - . ID=gene-AB25_RS15975;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=AB25_RS15975;old_locus_tag=AB25_1854 NZ_JJMC01000027.1 Protein Homology CDS 213068 213367 . - 0 ID=cds-WP_001229265.1;Parent=gene-AB25_RS15975;Dbxref=GenBank:WP_001229265.1;Name=WP_001229265.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677;gbkey=CDS;gene=ihfA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310446.1;locus_tag=AB25_RS15975;product=integration host factor subunit alpha;protein_id=WP_001229265.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 213372 215759 . - . ID=gene-AB25_RS15970;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=AB25_RS15970;old_locus_tag=AB25_1855 NZ_JJMC01000027.1 Protein Homology CDS 213372 215759 . - 0 ID=cds-WP_000672359.1;Parent=gene-AB25_RS15970;Dbxref=GenBank:WP_000672359.1;Name=WP_000672359.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416228.1;locus_tag=AB25_RS15970;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_000672359.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 215774 216757 . - . ID=gene-AB25_RS15965;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=AB25_RS15965;old_locus_tag=AB25_1856 NZ_JJMC01000027.1 Protein Homology CDS 215774 216757 . - 0 ID=cds-WP_000018596.1;Parent=gene-AB25_RS15965;Dbxref=GenBank:WP_000018596.1;Name=WP_000018596.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1;locus_tag=AB25_RS15965;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_000018596.1;transl_table=11 NZ_JJMC01000027.1 cmsearch sequence_feature 216967 217091 . - . ID=id-NZ_JJMC01000027.1:216967..217091;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JJMC01000027.1 RefSeq gene 217041 217085 . - . ID=gene-AB25_RS31105;Name=pheM;gbkey=Gene;gene=pheM;gene_biotype=protein_coding;locus_tag=AB25_RS31105 NZ_JJMC01000027.1 Protein Homology CDS 217041 217085 . - 0 ID=cds-WP_001386830.1;Parent=gene-AB25_RS31105;Dbxref=GenBank:WP_001386830.1;Name=WP_001386830.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheM;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310449.1;locus_tag=AB25_RS31105;product=pheST operon leader peptide PheM;protein_id=WP_001386830.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 217208 217564 . - . ID=gene-AB25_RS15960;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=AB25_RS15960;old_locus_tag=AB25_1857 NZ_JJMC01000027.1 Protein Homology CDS 217208 217564 . - 0 ID=cds-WP_001458014.1;Parent=gene-AB25_RS15960;Dbxref=GenBank:WP_001458014.1;Name=WP_001458014.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310450.1;locus_tag=AB25_RS15960;product=50S ribosomal protein L20;protein_id=WP_001458014.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 217617 217814 . - . ID=gene-AB25_RS15955;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=AB25_RS15955;old_locus_tag=AB25_1858 NZ_JJMC01000027.1 Protein Homology CDS 217617 217814 . - 0 ID=cds-WP_001124225.1;Parent=gene-AB25_RS15955;Dbxref=GenBank:WP_001124225.1;Name=WP_001124225.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=AB25_RS15955;product=50S ribosomal protein L35;protein_id=WP_001124225.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 217911 218453 . - . ID=gene-AB25_RS0125190;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=AB25_RS0125190 NZ_JJMC01000027.1 Protein Homology CDS 217911 218453 . - 0 ID=cds-WP_001700733.1;Parent=gene-AB25_RS0125190;Dbxref=GenBank:WP_001700733.1;Name=WP_001700733.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310452.1;locus_tag=AB25_RS0125190;product=translation initiation factor IF-3;protein_id=WP_001700733.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 218457 220385 . - . ID=gene-AB25_RS15950;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=AB25_RS15950;old_locus_tag=AB25_1860 NZ_JJMC01000027.1 Protein Homology CDS 218457 220385 . - 0 ID=cds-WP_001144208.1;Parent=gene-AB25_RS15950;Dbxref=GenBank:WP_001144208.1;Name=WP_001144208.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1;locus_tag=AB25_RS15950;product=threonine--tRNA ligase;protein_id=WP_001144208.1;transl_table=11 NZ_JJMC01000027.1 RefSeq pseudogene 220909 222778 . + . ID=gene-AB25_RS15945;Name=espL1;gbkey=Gene;gene=espL1;gene_biotype=pseudogene;locus_tag=AB25_RS15945;old_locus_tag=AB25_1861;pseudo=true NZ_JJMC01000027.1 Protein Homology CDS 220909 222778 . + 0 ID=cds-AB25_RS15945;Parent=gene-AB25_RS15945;Note=frameshifted;gbkey=CDS;gene=espL1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310454.1;locus_tag=AB25_RS15945;product=type III secretion system effector EspL1;pseudo=true;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 222954 223061 . + . ID=gene-AB25_RS15940;Name=yniD;gbkey=Gene;gene=yniD;gene_biotype=protein_coding;locus_tag=AB25_RS15940;old_locus_tag=AB25_1863 NZ_JJMC01000027.1 Protein Homology CDS 222954 223061 . + 0 ID=cds-WP_001142445.1;Parent=gene-AB25_RS15940;Dbxref=GenBank:WP_001142445.1;Name=WP_001142445.1;gbkey=CDS;gene=yniD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588455.2;locus_tag=AB25_RS15940;product=small membrane protein YniD;protein_id=WP_001142445.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 223114 223872 . - . ID=gene-AB25_RS15935;Name=ydiY;gbkey=Gene;gene=ydiY;gene_biotype=protein_coding;locus_tag=AB25_RS15935;old_locus_tag=AB25_1864 NZ_JJMC01000027.1 Protein Homology CDS 223114 223872 . - 0 ID=cds-WP_000771396.1;Parent=gene-AB25_RS15935;Dbxref=GenBank:WP_000771396.1;Name=WP_000771396.1;gbkey=CDS;gene=ydiY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310455.1;locus_tag=AB25_RS15935;product=DUF481 domain-containing protein;protein_id=WP_000771396.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 224159 225088 . + . ID=gene-AB25_RS15930;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=AB25_RS15930;old_locus_tag=AB25_1865 NZ_JJMC01000027.1 Protein Homology CDS 224159 225088 . + 0 ID=cds-WP_000251735.1;Parent=gene-AB25_RS15930;Dbxref=GenBank:WP_000251735.1;Name=WP_000251735.1;Ontology_term=GO:0005975,GO:0016773;gbkey=CDS;gene=pfkB;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707391.2;locus_tag=AB25_RS15930;product=6-phosphofructokinase II;protein_id=WP_000251735.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 225189 225479 . + . ID=gene-AB25_RS15925;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;locus_tag=AB25_RS15925;old_locus_tag=AB25_1866 NZ_JJMC01000027.1 Protein Homology CDS 225189 225479 . + 0 ID=cds-WP_000146159.1;Parent=gene-AB25_RS15925;Dbxref=GenBank:WP_000146159.1;Name=WP_000146159.1;Ontology_term=GO:0004521;gbkey=CDS;gene=ghoS;go_function=RNA endonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310457.1;locus_tag=AB25_RS15925;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=WP_000146159.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 225585 226445 . + . ID=gene-AB25_RS15920;Name=yniA;gbkey=Gene;gene=yniA;gene_biotype=protein_coding;locus_tag=AB25_RS15920;old_locus_tag=AB25_1867 NZ_JJMC01000027.1 Protein Homology CDS 225585 226445 . + 0 ID=cds-WP_000267657.1;Parent=gene-AB25_RS15920;Dbxref=GenBank:WP_000267657.1;Name=WP_000267657.1;gbkey=CDS;gene=yniA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310458.1;locus_tag=AB25_RS15920;product=fructosamine kinase family protein;protein_id=WP_000267657.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 226486 227022 . - . ID=gene-AB25_RS15915;Name=yniB;gbkey=Gene;gene=yniB;gene_biotype=protein_coding;locus_tag=AB25_RS15915;old_locus_tag=AB25_1868 NZ_JJMC01000027.1 Protein Homology CDS 226486 227022 . - 0 ID=cds-WP_000222172.1;Parent=gene-AB25_RS15915;Dbxref=GenBank:WP_000222172.1;Name=WP_000222172.1;gbkey=CDS;gene=yniB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416240.1;locus_tag=AB25_RS15915;product=YniB family protein;protein_id=WP_000222172.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 227169 227837 . + . ID=gene-AB25_RS15910;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=protein_coding;locus_tag=AB25_RS15910;old_locus_tag=AB25_1869 NZ_JJMC01000027.1 Protein Homology CDS 227169 227837 . + 0 ID=cds-WP_000106834.1;Parent=gene-AB25_RS15910;Dbxref=GenBank:WP_000106834.1;Name=WP_000106834.1;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310460.1;locus_tag=AB25_RS15910;product=hexitol phosphatase HxpB;protein_id=WP_000106834.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 228000 228590 . + . ID=gene-AB25_RS15905;Name=ydjM;gbkey=Gene;gene=ydjM;gene_biotype=protein_coding;locus_tag=AB25_RS15905;old_locus_tag=AB25_1870 NZ_JJMC01000027.1 Protein Homology CDS 228000 228590 . + 0 ID=cds-WP_001297653.1;Parent=gene-AB25_RS15905;Dbxref=GenBank:WP_001297653.1;Name=WP_001297653.1;gbkey=CDS;gene=ydjM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707386.2;locus_tag=AB25_RS15905;product=metal-dependent hydrolase;protein_id=WP_001297653.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 228723 230114 . + . ID=gene-AB25_RS15900;Name=tcyP;gbkey=Gene;gene=tcyP;gene_biotype=protein_coding;locus_tag=AB25_RS15900;old_locus_tag=AB25_1871 NZ_JJMC01000027.1 Protein Homology CDS 228723 230114 . + 0 ID=cds-WP_001010722.1;Parent=gene-AB25_RS15900;Dbxref=GenBank:WP_001010722.1;Name=WP_001010722.1;gbkey=CDS;gene=tcyP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120792.1;locus_tag=AB25_RS15900;product=cystine/sulfocysteine:cation symporter;protein_id=WP_001010722.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 230118 230921 . - . ID=gene-AB25_RS15895;Name=ydjO;gbkey=Gene;gene=ydjO;gene_biotype=protein_coding;locus_tag=AB25_RS15895;old_locus_tag=AB25_1872 NZ_JJMC01000027.1 Protein Homology CDS 230118 230921 . - 0 ID=cds-WP_032170742.1;Parent=gene-AB25_RS15895;Dbxref=GenBank:WP_032170742.1;Name=WP_032170742.1;gbkey=CDS;gene=ydjO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416244.2;locus_tag=AB25_RS15895;product=protein YdjO;protein_id=WP_032170742.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 231210 231473 . - . ID=gene-AB25_RS15890;Name=cedA;gbkey=Gene;gene=cedA;gene_biotype=protein_coding;locus_tag=AB25_RS15890;old_locus_tag=AB25_1873 NZ_JJMC01000027.1 Protein Homology CDS 231210 231473 . - 0 ID=cds-WP_001241561.1;Parent=gene-AB25_RS15890;Dbxref=GenBank:WP_001241561.1;Name=WP_001241561.1;gbkey=CDS;gene=cedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310464.1;locus_tag=AB25_RS15890;product=cell division activator CedA;protein_id=WP_001241561.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 231656 233917 . + . ID=gene-AB25_RS15885;Name=katE;gbkey=Gene;gene=katE;gene_biotype=protein_coding;locus_tag=AB25_RS15885;old_locus_tag=AB25_1874 NZ_JJMC01000027.1 Protein Homology CDS 231656 233917 . + 0 ID=cds-WP_000077873.1;Parent=gene-AB25_RS15885;Dbxref=GenBank:WP_000077873.1;Name=WP_000077873.1;Ontology_term=GO:0006979,GO:0004096,GO:0020037;gbkey=CDS;gene=katE;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025308.1;locus_tag=AB25_RS15885;product=catalase HPII;protein_id=WP_000077873.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 233964 234722 . - . ID=gene-AB25_RS15880;Name=chbG;gbkey=Gene;gene=chbG;gene_biotype=protein_coding;locus_tag=AB25_RS15880;old_locus_tag=AB25_1875 NZ_JJMC01000027.1 Protein Homology CDS 233964 234722 . - 0 ID=cds-WP_000440463.1;Parent=gene-AB25_RS15880;Dbxref=GenBank:WP_000440463.1;Name=WP_000440463.1;Ontology_term=GO:0000272,GO:0016811;gbkey=CDS;gene=chbG;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310466.1;locus_tag=AB25_RS15880;product=chitin disaccharide deacetylase;protein_id=WP_000440463.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 234735 236087 . - . ID=gene-AB25_RS15875;Name=celF;gbkey=Gene;gene=celF;gene_biotype=protein_coding;gene_synonym=chbF;locus_tag=AB25_RS15875;old_locus_tag=AB25_1876 NZ_JJMC01000027.1 Protein Homology CDS 234735 236087 . - 0 ID=cds-WP_000078748.1;Parent=gene-AB25_RS15875;Dbxref=GenBank:WP_000078748.1;Name=WP_000078748.1;gbkey=CDS;gene=celF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310467.1;locus_tag=AB25_RS15875;product=6-phospho-beta-glucosidase;protein_id=WP_000078748.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 236191 237033 . - . ID=gene-AB25_RS15870;Name=chbR;gbkey=Gene;gene=chbR;gene_biotype=protein_coding;locus_tag=AB25_RS15870;old_locus_tag=AB25_1877 NZ_JJMC01000027.1 Protein Homology CDS 236191 237033 . - 0 ID=cds-WP_001392203.1;Parent=gene-AB25_RS15870;Dbxref=GenBank:WP_001392203.1;Name=WP_001392203.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=chbR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416249.1;locus_tag=AB25_RS15870;product=transcriptional regulator ChbR;protein_id=WP_001392203.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 237041 237391 . - . ID=gene-AB25_RS15865;Name=chbA;gbkey=Gene;gene=chbA;gene_biotype=protein_coding;locus_tag=AB25_RS15865;old_locus_tag=AB25_1878 NZ_JJMC01000027.1 Protein Homology CDS 237041 237391 . - 0 ID=cds-WP_000968919.1;Parent=gene-AB25_RS15865;Dbxref=GenBank:WP_000968919.1;Name=WP_000968919.1;gbkey=CDS;gene=chbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310469.1;locus_tag=AB25_RS15865;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIA;protein_id=WP_000968919.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 237442 238800 . - . ID=gene-AB25_RS15860;Name=chbC;gbkey=Gene;gene=chbC;gene_biotype=protein_coding;locus_tag=AB25_RS15860;old_locus_tag=AB25_1879 NZ_JJMC01000027.1 Protein Homology CDS 237442 238800 . - 0 ID=cds-WP_000073021.1;Parent=gene-AB25_RS15860;Dbxref=GenBank:WP_000073021.1;Name=WP_000073021.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=chbC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416251.1;locus_tag=AB25_RS15860;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;protein_id=WP_000073021.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 238885 239205 . - . ID=gene-AB25_RS15855;Name=chbB;gbkey=Gene;gene=chbB;gene_biotype=protein_coding;locus_tag=AB25_RS15855;old_locus_tag=AB25_1880 NZ_JJMC01000027.1 Protein Homology CDS 238885 239205 . - 0 ID=cds-WP_000412169.1;Parent=gene-AB25_RS15855;Dbxref=GenBank:WP_000412169.1;Name=WP_000412169.1;gbkey=CDS;gene=chbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310471.1;locus_tag=AB25_RS15855;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIB;protein_id=WP_000412169.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 239504 239842 . - . ID=gene-AB25_RS15850;Name=osmE;gbkey=Gene;gene=osmE;gene_biotype=protein_coding;locus_tag=AB25_RS15850;old_locus_tag=AB25_1881 NZ_JJMC01000027.1 Protein Homology CDS 239504 239842 . - 0 ID=cds-WP_001039044.1;Parent=gene-AB25_RS15850;Dbxref=GenBank:WP_001039044.1;Name=WP_001039044.1;Ontology_term=GO:0019867;gbkey=CDS;gene=osmE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310472.1;locus_tag=AB25_RS15850;product=osmotically-inducible lipoprotein OsmE;protein_id=WP_001039044.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 240044 240871 . + . ID=gene-AB25_RS15845;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=AB25_RS15845;old_locus_tag=AB25_1882 NZ_JJMC01000027.1 Protein Homology CDS 240044 240871 . + 0 ID=cds-WP_000175041.1;Parent=gene-AB25_RS15845;Dbxref=GenBank:WP_000175041.1;Name=WP_000175041.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310473.1;locus_tag=AB25_RS15845;product=ammonia-dependent NAD(+) synthetase;protein_id=WP_000175041.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 241101 241988 . + . ID=gene-AB25_RS15840;Name=cho;gbkey=Gene;gene=cho;gene_biotype=protein_coding;locus_tag=AB25_RS15840;old_locus_tag=AB25_1883 NZ_JJMC01000027.1 Protein Homology CDS 241101 241988 . + 0 ID=cds-WP_001392200.1;Parent=gene-AB25_RS15840;Dbxref=GenBank:WP_001392200.1;Name=WP_001392200.1;gbkey=CDS;gene=cho;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310474.1;locus_tag=AB25_RS15840;product=excinuclease Cho;protein_id=WP_001392200.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 241951 242523 . - . ID=gene-AB25_RS15835;Name=ves;gbkey=Gene;gene=ves;gene_biotype=protein_coding;locus_tag=AB25_RS15835;old_locus_tag=AB25_1884 NZ_JJMC01000027.1 Protein Homology CDS 241951 242523 . - 0 ID=cds-WP_001392177.1;Parent=gene-AB25_RS15835;Dbxref=GenBank:WP_001392177.1;Name=WP_001392177.1;gbkey=CDS;gene=ves;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392177.1;locus_tag=AB25_RS15835;product=environmental stress-induced protein Ves;protein_id=WP_001392177.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 242726 243211 . - . ID=gene-AB25_RS15830;Name=spy;gbkey=Gene;gene=spy;gene_biotype=protein_coding;locus_tag=AB25_RS15830;old_locus_tag=AB25_1885 NZ_JJMC01000027.1 Protein Homology CDS 242726 243211 . - 0 ID=cds-WP_001228981.1;Parent=gene-AB25_RS15830;Dbxref=GenBank:WP_001228981.1;Name=WP_001228981.1;Ontology_term=GO:0042597;gbkey=CDS;gene=spy;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310476.1;locus_tag=AB25_RS15830;product=ATP-independent periplasmic protein-refolding chaperone Spy;protein_id=WP_001228981.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 243541 244509 . - . ID=gene-AB25_RS15825;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=AB25_RS15825;old_locus_tag=AB25_1886 NZ_JJMC01000027.1 Protein Homology CDS 243541 244509 . - 0 ID=cds-WP_000368506.1;Parent=gene-AB25_RS15825;Dbxref=GenBank:WP_000368506.1;Name=WP_000368506.1;Ontology_term=GO:0006527,GO:0008270,GO:0009017;gbkey=CDS;gene=astE;go_function=zinc ion binding|0008270||IEA,succinylglutamate desuccinylase activity|0009017||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416258.1;locus_tag=AB25_RS15825;product=succinylglutamate desuccinylase;protein_id=WP_000368506.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 244502 245845 . - . ID=gene-AB25_RS15820;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=AB25_RS15820;old_locus_tag=AB25_1887 NZ_JJMC01000027.1 Protein Homology CDS 244502 245845 . - 0 ID=cds-WP_000995005.1;Parent=gene-AB25_RS15820;Dbxref=GenBank:WP_000995005.1;Name=WP_000995005.1;Ontology_term=GO:0006527,GO:0009015;gbkey=CDS;gene=astB;go_function=N-succinylarginine dihydrolase activity|0009015||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416259.1;locus_tag=AB25_RS15820;product=N-succinylarginine dihydrolase;protein_id=WP_000995005.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 245842 247320 . - . ID=gene-AB25_RS15815;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=AB25_RS15815;old_locus_tag=AB25_1888 NZ_JJMC01000027.1 Protein Homology CDS 245842 247320 . - 0 ID=cds-WP_000177243.1;Parent=gene-AB25_RS15815;Dbxref=GenBank:WP_000177243.1;Name=WP_000177243.1;Ontology_term=GO:0006527,GO:0043824;gbkey=CDS;gene=astD;go_function=succinylglutamate-semialdehyde dehydrogenase activity|0043824||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310479.1;locus_tag=AB25_RS15815;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=WP_000177243.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 247317 248351 . - . ID=gene-AB25_RS15810;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=AB25_RS15810;old_locus_tag=AB25_1889 NZ_JJMC01000027.1 Protein Homology CDS 247317 248351 . - 0 ID=cds-WP_000989414.1;Parent=gene-AB25_RS15810;Dbxref=GenBank:WP_000989414.1;Name=WP_000989414.1;Ontology_term=GO:0006527,GO:0008791;gbkey=CDS;gene=astA;go_function=arginine N-succinyltransferase activity|0008791||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310480.1;locus_tag=AB25_RS15810;product=arginine N-succinyltransferase;protein_id=WP_000989414.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 248348 249568 . - . ID=gene-AB25_RS15805;Name=astC;gbkey=Gene;gene=astC;gene_biotype=protein_coding;locus_tag=AB25_RS15805;old_locus_tag=AB25_1890 NZ_JJMC01000027.1 Protein Homology CDS 248348 249568 . - 0 ID=cds-WP_000081983.1;Parent=gene-AB25_RS15805;Dbxref=GenBank:WP_000081983.1;Name=WP_000081983.1;gbkey=CDS;gene=astC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416262.1;locus_tag=AB25_RS15805;product=succinylornithine/acetylornithine transaminase;protein_id=WP_000081983.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 250014 250820 . + . ID=gene-AB25_RS15800;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=AB25_RS15800;old_locus_tag=AB25_1892 NZ_JJMC01000027.1 Protein Homology CDS 250014 250820 . + 0 ID=cds-WP_000673918.1;Parent=gene-AB25_RS15800;Dbxref=GenBank:WP_000673918.1;Name=WP_000673918.1;Ontology_term=GO:0006281,GO:0003677,GO:0004519,GO:0008311;gbkey=CDS;gene=xthA;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,double-stranded DNA 3'-5' DNA exonuclease activity|0008311||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416263.1;locus_tag=AB25_RS15800;product=exodeoxyribonuclease III;protein_id=WP_000673918.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 250987 251697 . + . ID=gene-AB25_RS15795;Name=ydjX;gbkey=Gene;gene=ydjX;gene_biotype=protein_coding;locus_tag=AB25_RS15795;old_locus_tag=AB25_1893 NZ_JJMC01000027.1 Protein Homology CDS 250987 251697 . + 0 ID=cds-WP_001356267.1;Parent=gene-AB25_RS15795;Dbxref=GenBank:WP_001356267.1;Name=WP_001356267.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ydjX;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416264.4;locus_tag=AB25_RS15795;product=TVP38/TMEM64 family protein;protein_id=WP_001356267.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 251702 252379 . + . ID=gene-AB25_RS15790;Name=ydjY;gbkey=Gene;gene=ydjY;gene_biotype=protein_coding;locus_tag=AB25_RS15790;old_locus_tag=AB25_1894 NZ_JJMC01000027.1 Protein Homology CDS 251702 252379 . + 0 ID=cds-WP_000077941.1;Parent=gene-AB25_RS15790;Dbxref=GenBank:WP_000077941.1;Name=WP_000077941.1;gbkey=CDS;gene=ydjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416265.4;locus_tag=AB25_RS15790;product=lipoprotein YdjY;protein_id=WP_000077941.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 252394 253101 . + . ID=gene-AB25_RS15785;Name=ydjZ;gbkey=Gene;gene=ydjZ;gene_biotype=protein_coding;locus_tag=AB25_RS15785;old_locus_tag=AB25_1895 NZ_JJMC01000027.1 Protein Homology CDS 252394 253101 . + 0 ID=cds-WP_000975812.1;Parent=gene-AB25_RS15785;Dbxref=GenBank:WP_000975812.1;Name=WP_000975812.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ydjZ;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310485.1;locus_tag=AB25_RS15785;product=TVP38/TMEM64 family protein;protein_id=WP_000975812.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 253101 253649 . + . ID=gene-AB25_RS15780;Name=ynjA;gbkey=Gene;gene=ynjA;gene_biotype=protein_coding;locus_tag=AB25_RS15780;old_locus_tag=AB25_1896 NZ_JJMC01000027.1 Protein Homology CDS 253101 253649 . + 0 ID=cds-WP_000524080.1;Parent=gene-AB25_RS15780;Dbxref=GenBank:WP_000524080.1;Name=WP_000524080.1;Ontology_term=GO:0051920;gbkey=CDS;gene=ynjA;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310486.1;locus_tag=AB25_RS15780;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_000524080.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 253659 254825 . + . ID=gene-AB25_RS15775;Name=ynjB;gbkey=Gene;gene=ynjB;gene_biotype=protein_coding;locus_tag=AB25_RS15775;old_locus_tag=AB25_1897 NZ_JJMC01000027.1 Protein Homology CDS 253659 254825 . + 0 ID=cds-WP_001215319.1;Parent=gene-AB25_RS15775;Dbxref=GenBank:WP_001215319.1;Name=WP_001215319.1;gbkey=CDS;gene=ynjB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416268.2;locus_tag=AB25_RS15775;product=ABC transporter substrate-binding protein;protein_id=WP_001215319.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 254798 256333 . + . ID=gene-AB25_RS15770;Name=ynjC;gbkey=Gene;gene=ynjC;gene_biotype=protein_coding;locus_tag=AB25_RS15770;old_locus_tag=AB25_1898 NZ_JJMC01000027.1 Protein Homology CDS 254798 256333 . + 0 ID=cds-WP_000224975.1;Parent=gene-AB25_RS15770;Dbxref=GenBank:WP_000224975.1;Name=WP_000224975.1;gbkey=CDS;gene=ynjC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310488.2;locus_tag=AB25_RS15770;product=ABC transporter permease subunit;protein_id=WP_000224975.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 256333 256986 . + . ID=gene-AB25_RS15765;Name=ynjD;gbkey=Gene;gene=ynjD;gene_biotype=protein_coding;locus_tag=AB25_RS15765;old_locus_tag=AB25_1899 NZ_JJMC01000027.1 Protein Homology CDS 256333 256986 . + 0 ID=cds-WP_001299561.1;Parent=gene-AB25_RS15765;Dbxref=GenBank:WP_001299561.1;Name=WP_001299561.1;Ontology_term=GO:0005524;gbkey=CDS;gene=ynjD;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310489.1;locus_tag=AB25_RS15765;product=ATP-binding cassette domain-containing protein;protein_id=WP_001299561.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 257053 258360 . + . ID=gene-AB25_RS15760;Name=ynjE;gbkey=Gene;gene=ynjE;gene_biotype=protein_coding;locus_tag=AB25_RS15760;old_locus_tag=AB25_1900 NZ_JJMC01000027.1 Protein Homology CDS 257053 258360 . + 0 ID=cds-WP_001297658.1;Parent=gene-AB25_RS15760;Dbxref=GenBank:WP_001297658.1;Name=WP_001297658.1;gbkey=CDS;gene=ynjE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416271.4;locus_tag=AB25_RS15760;product=thiosulfate sulfurtransferase YnjE;protein_id=WP_001297658.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 258369 258989 . - . ID=gene-AB25_RS15755;Name=ynjF;gbkey=Gene;gene=ynjF;gene_biotype=protein_coding;locus_tag=AB25_RS15755;old_locus_tag=AB25_1901 NZ_JJMC01000027.1 Protein Homology CDS 258369 258989 . - 0 ID=cds-WP_001307237.1;Parent=gene-AB25_RS15755;Dbxref=GenBank:WP_001307237.1;Name=WP_001307237.1;Ontology_term=GO:0008654,GO:0000287,GO:0016780,GO:0016020;gbkey=CDS;gene=ynjF;go_component=membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707357.2;locus_tag=AB25_RS15755;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_001307237.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 259076 259483 . + . ID=gene-AB25_RS15750;Name=nudG;gbkey=Gene;gene=nudG;gene_biotype=protein_coding;locus_tag=AB25_RS15750;old_locus_tag=AB25_1902 NZ_JJMC01000027.1 Protein Homology CDS 259076 259483 . + 0 ID=cds-WP_000781893.1;Parent=gene-AB25_RS15750;Dbxref=GenBank:WP_000781893.1;Name=WP_000781893.1;gbkey=CDS;gene=nudG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416273.1;locus_tag=AB25_RS15750;product=CTP pyrophosphohydrolase;protein_id=WP_000781893.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 259449 259721 . - . ID=gene-AB25_RS15745;Name=ynjH;gbkey=Gene;gene=ynjH;gene_biotype=protein_coding;locus_tag=AB25_RS15745;old_locus_tag=AB25_1903 NZ_JJMC01000027.1 Protein Homology CDS 259449 259721 . - 0 ID=cds-WP_000085233.1;Parent=gene-AB25_RS15745;Dbxref=GenBank:WP_000085233.1;Name=WP_000085233.1;gbkey=CDS;gene=ynjH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416274.1;locus_tag=AB25_RS15745;product=YnjH family protein;protein_id=WP_000085233.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 259957 261300 . + . ID=gene-AB25_RS15740;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=AB25_RS15740;old_locus_tag=AB25_1904 NZ_JJMC01000027.1 Protein Homology CDS 259957 261300 . + 0 ID=cds-WP_000373045.1;Parent=gene-AB25_RS15740;Dbxref=GenBank:WP_000373045.1;Name=WP_000373045.1;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310494.1;locus_tag=AB25_RS15740;product=NADP-specific glutamate dehydrogenase;protein_id=WP_000373045.1;transl_table=11 NZ_JJMC01000027.1 RefSeq pseudogene 261417 262458 . - . ID=gene-AB25_RS0125200;Name=ynjI;gbkey=Gene;gene=ynjI;gene_biotype=pseudogene;locus_tag=AB25_RS0125200;old_locus_tag=AB25_1905;pseudo=true NZ_JJMC01000027.1 Protein Homology CDS 261417 262458 . - 0 ID=cds-AB25_RS0125200;Parent=gene-AB25_RS0125200;Note=frameshifted;gbkey=CDS;gene=ynjI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416276.4;locus_tag=AB25_RS0125200;product=DUF1266 domain-containing protein;pseudo=true;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 262586 264547 . - . ID=gene-AB25_RS15735;Name=topB;gbkey=Gene;gene=topB;gene_biotype=protein_coding;locus_tag=AB25_RS15735;old_locus_tag=AB25_1907 NZ_JJMC01000027.1 Protein Homology CDS 262586 264547 . - 0 ID=cds-WP_001235796.1;Parent=gene-AB25_RS15735;Dbxref=GenBank:WP_001235796.1;Name=WP_001235796.1;gbkey=CDS;gene=topB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416277.1;locus_tag=AB25_RS15735;product=DNA topoisomerase III;protein_id=WP_001235796.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 264552 265595 . - . ID=gene-AB25_RS15730;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=AB25_RS15730;old_locus_tag=AB25_1908 NZ_JJMC01000027.1 Protein Homology CDS 264552 265595 . - 0 ID=cds-WP_001297659.1;Parent=gene-AB25_RS15730;Dbxref=GenBank:WP_001297659.1;Name=WP_001297659.1;Ontology_term=GO:0016260,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310497.1;locus_tag=AB25_RS15730;product=selenide%2C water dikinase SelD;protein_id=WP_001297659.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 265712 266263 . - . ID=gene-AB25_RS15725;Name=ydjA;gbkey=Gene;gene=ydjA;gene_biotype=protein_coding;locus_tag=AB25_RS15725;old_locus_tag=AB25_1909 NZ_JJMC01000027.1 Protein Homology CDS 265712 266263 . - 0 ID=cds-WP_000339283.1;Parent=gene-AB25_RS15725;Dbxref=GenBank:WP_000339283.1;Name=WP_000339283.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydjA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310498.1;locus_tag=AB25_RS15725;product=NAD(P)H nitroreductase;protein_id=WP_000339283.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 266424 268280 . + . ID=gene-AB25_RS15720;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=AB25_RS15720;old_locus_tag=AB25_1910 NZ_JJMC01000027.1 Protein Homology CDS 266424 268280 . + 0 ID=cds-WP_032170745.1;Parent=gene-AB25_RS15720;Dbxref=GenBank:WP_032170745.1;Name=WP_032170745.1;Ontology_term=GO:0006465,GO:0008233;gbkey=CDS;gene=sppA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707347.2;locus_tag=AB25_RS15720;product=signal peptide peptidase SppA;protein_id=WP_032170745.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 268447 269463 . + . ID=gene-AB25_RS15715;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=AB25_RS15715;old_locus_tag=AB25_1911 NZ_JJMC01000027.1 Protein Homology CDS 268447 269463 . + 0 ID=cds-WP_001170162.1;Parent=gene-AB25_RS15715;Dbxref=GenBank:WP_001170162.1;Name=WP_001170162.1;Ontology_term=GO:0006520,GO:0004067;gbkey=CDS;gene=ansA;go_function=asparaginase activity|0004067||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310501.1;locus_tag=AB25_RS15715;product=asparaginase;protein_id=WP_001170162.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 269474 270115 . + . ID=gene-AB25_RS15710;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=AB25_RS15710;old_locus_tag=AB25_1912 NZ_JJMC01000027.1 Protein Homology CDS 269474 270115 . + 0 ID=cds-WP_001120535.1;Parent=gene-AB25_RS15710;Dbxref=GenBank:WP_001120535.1;Name=WP_001120535.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310502.2;locus_tag=AB25_RS15710;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=WP_001120535.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 270276 270548 . - . ID=gene-AB25_RS15705;Name=yeaC;gbkey=Gene;gene=yeaC;gene_biotype=protein_coding;locus_tag=AB25_RS15705;old_locus_tag=AB25_1913 NZ_JJMC01000027.1 Protein Homology CDS 270276 270548 . - 0 ID=cds-WP_001046790.1;Parent=gene-AB25_RS15705;Dbxref=GenBank:WP_001046790.1;Name=WP_001046790.1;gbkey=CDS;gene=yeaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707337.2;locus_tag=AB25_RS15705;product=YeaC family protein;protein_id=WP_001046790.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 270590 271003 . - . ID=gene-AB25_RS15700;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=AB25_RS15700;old_locus_tag=AB25_1914 NZ_JJMC01000027.1 Protein Homology CDS 270590 271003 . - 0 ID=cds-WP_001284613.1;Parent=gene-AB25_RS15700;Dbxref=GenBank:WP_001284613.1;Name=WP_001284613.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707336.1;locus_tag=AB25_RS15700;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_001284613.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 271345 272340 . + . ID=gene-AB25_RS15695;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=AB25_RS15695;old_locus_tag=AB25_1915 NZ_JJMC01000027.1 Protein Homology CDS 271345 272340 . + 0 ID=cds-WP_000153502.1;Parent=gene-AB25_RS15695;Dbxref=GenBank:WP_000153502.1;Name=WP_000153502.1;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322611.1;locus_tag=AB25_RS15695;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_000153502.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 272424 273308 . + . ID=gene-AB25_RS15690;Name=yeaD;gbkey=Gene;gene=yeaD;gene_biotype=protein_coding;locus_tag=AB25_RS15690;old_locus_tag=AB25_1916 NZ_JJMC01000027.1 Protein Homology CDS 272424 273308 . + 0 ID=cds-WP_001356266.1;Parent=gene-AB25_RS15690;Dbxref=GenBank:WP_001356266.1;Name=WP_001356266.1;Ontology_term=GO:0005975,GO:0016857;gbkey=CDS;gene=yeaD;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707334.2;locus_tag=AB25_RS15690;product=D-hexose-6-phosphate mutarotase;protein_id=WP_001356266.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 273359 274213 . - . ID=gene-AB25_RS15685;Name=yeaE;gbkey=Gene;gene=yeaE;gene_biotype=protein_coding;locus_tag=AB25_RS15685;old_locus_tag=AB25_1917 NZ_JJMC01000027.1 Protein Homology CDS 273359 274213 . - 0 ID=cds-WP_001186365.1;Parent=gene-AB25_RS15685;Dbxref=GenBank:WP_001186365.1;Name=WP_001186365.1;gbkey=CDS;gene=yeaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310517.1;locus_tag=AB25_RS15685;product=methylglyoxal reductase YeaE;protein_id=WP_001186365.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 274303 275049 . - . ID=gene-AB25_RS15680;Name=mipA;gbkey=Gene;gene=mipA;gene_biotype=protein_coding;locus_tag=AB25_RS15680;old_locus_tag=AB25_1918 NZ_JJMC01000027.1 Protein Homology CDS 274303 275049 . - 0 ID=cds-WP_000163771.1;Parent=gene-AB25_RS15680;Dbxref=GenBank:WP_000163771.1;Name=WP_000163771.1;gbkey=CDS;gene=mipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416296.1;locus_tag=AB25_RS15680;product=scaffolding protein MipA;protein_id=WP_000163771.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 275485 277419 . + . ID=gene-AB25_RS15675;Name=yeaG;gbkey=Gene;gene=yeaG;gene_biotype=protein_coding;locus_tag=AB25_RS15675;old_locus_tag=AB25_1919 NZ_JJMC01000027.1 Protein Homology CDS 275485 277419 . + 0 ID=cds-WP_001019882.1;Parent=gene-AB25_RS15675;Dbxref=GenBank:WP_001019882.1;Name=WP_001019882.1;gbkey=CDS;gene=yeaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011411173.1;locus_tag=AB25_RS15675;product=protein kinase YeaG;protein_id=WP_001019882.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 277532 278815 . + . ID=gene-AB25_RS15670;Name=yeaH;gbkey=Gene;gene=yeaH;gene_biotype=protein_coding;locus_tag=AB25_RS15670;old_locus_tag=AB25_1920 NZ_JJMC01000027.1 Protein Homology CDS 277532 278815 . + 0 ID=cds-WP_000219686.1;Parent=gene-AB25_RS15670;Dbxref=GenBank:WP_000219686.1;Name=WP_000219686.1;gbkey=CDS;gene=yeaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310520.1;locus_tag=AB25_RS15670;product=YeaH/YhbH family protein;protein_id=WP_000219686.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 278962 280437 . + . ID=gene-AB25_RS15665;Name=cdgI;gbkey=Gene;gene=cdgI;gene_biotype=protein_coding;locus_tag=AB25_RS15665;old_locus_tag=AB25_1921 NZ_JJMC01000027.1 Protein Homology CDS 278962 280437 . + 0 ID=cds-WP_000616433.1;Parent=gene-AB25_RS15665;Dbxref=GenBank:WP_000616433.1;Name=WP_000616433.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621;gbkey=CDS;gene=cdgI;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416299.1;locus_tag=AB25_RS15665;product=sensor domain-containing diguanylate cyclase;protein_id=WP_000616433.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 280618 282108 . + . ID=gene-AB25_RS15660;Name=dgcJ;gbkey=Gene;gene=dgcJ;gene_biotype=protein_coding;locus_tag=AB25_RS15660;old_locus_tag=AB25_1922 NZ_JJMC01000027.1 Protein Homology CDS 280618 282108 . + 0 ID=cds-WP_001295489.1;Parent=gene-AB25_RS15660;Dbxref=GenBank:WP_001295489.1;Name=WP_001295489.1;Ontology_term=GO:0043709,GO:1902201,GO:0052621;gbkey=CDS;gene=dgcJ;go_function=diguanylate cyclase activity|0052621||IEA;go_process=cell adhesion involved in single-species biofilm formation|0043709||IEA,negative regulation of bacterial-type flagellum-dependent cell motility|1902201||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416300.2;locus_tag=AB25_RS15660;product=diguanylate cyclase DgcJ;protein_id=WP_001295489.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 282151 282654 . + . ID=gene-AB25_RS15655;Name=yeaK;gbkey=Gene;gene=yeaK;gene_biotype=protein_coding;locus_tag=AB25_RS15655;old_locus_tag=AB25_1923 NZ_JJMC01000027.1 Protein Homology CDS 282151 282654 . + 0 ID=cds-WP_000138052.1;Parent=gene-AB25_RS15655;Dbxref=GenBank:WP_000138052.1;Name=WP_000138052.1;gbkey=CDS;gene=yeaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310523.1;locus_tag=AB25_RS15655;product=mischarged aminoacyl-tRNA deacylase;protein_id=WP_000138052.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 282655 282759 . - . ID=gene-AB25_RS15650;Name=yoaI;gbkey=Gene;gene=yoaI;gene_biotype=protein_coding;locus_tag=AB25_RS15650;old_locus_tag=AB25_1924 NZ_JJMC01000027.1 Protein Homology CDS 282655 282759 . - 0 ID=cds-WP_000999630.1;Parent=gene-AB25_RS15650;Dbxref=GenBank:WP_000999630.1;Name=WP_000999630.1;gbkey=CDS;gene=yoaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416302.2;locus_tag=AB25_RS15650;product=small membrane protein YoaI;protein_id=WP_000999630.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 282929 283375 . + . ID=gene-AB25_RS15645;Name=yeaL;gbkey=Gene;gene=yeaL;gene_biotype=protein_coding;locus_tag=AB25_RS15645;old_locus_tag=AB25_1925 NZ_JJMC01000027.1 Protein Homology CDS 282929 283375 . + 0 ID=cds-WP_000460707.1;Parent=gene-AB25_RS15645;Dbxref=GenBank:WP_000460707.1;Name=WP_000460707.1;gbkey=CDS;gene=yeaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416303.1;locus_tag=AB25_RS15645;product=DUF441 domain-containing protein;protein_id=WP_000460707.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 283332 284153 . - . ID=gene-AB25_RS15640;Name=nimR;gbkey=Gene;gene=nimR;gene_biotype=protein_coding;locus_tag=AB25_RS15640;old_locus_tag=AB25_1926 NZ_JJMC01000027.1 Protein Homology CDS 283332 284153 . - 0 ID=cds-WP_000972239.1;Parent=gene-AB25_RS15640;Dbxref=GenBank:WP_000972239.1;Name=WP_000972239.1;gbkey=CDS;gene=nimR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416304.1;locus_tag=AB25_RS15640;product=DNA-binding transcriptional regulator NimR;protein_id=WP_000972239.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 284250 285431 . + . ID=gene-AB25_RS15635;Name=nimT;gbkey=Gene;gene=nimT;gene_biotype=protein_coding;locus_tag=AB25_RS15635;old_locus_tag=AB25_1927 NZ_JJMC01000027.1 Protein Homology CDS 284250 285431 . + 0 ID=cds-WP_000128469.1;Parent=gene-AB25_RS15635;Dbxref=GenBank:WP_000128469.1;Name=WP_000128469.1;gbkey=CDS;gene=nimT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310527.1;locus_tag=AB25_RS15635;product=2-nitroimidazole transporter;protein_id=WP_000128469.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 285486 285833 . + . ID=gene-AB25_RS15630;Name=yeaO;gbkey=Gene;gene=yeaO;gene_biotype=protein_coding;locus_tag=AB25_RS15630;old_locus_tag=AB25_1928 NZ_JJMC01000027.1 Protein Homology CDS 285486 285833 . + 0 ID=cds-WP_001295490.1;Parent=gene-AB25_RS15630;Dbxref=GenBank:WP_001295490.1;Name=WP_001295490.1;gbkey=CDS;gene=yeaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416306.2;locus_tag=AB25_RS15630;product=DUF488 domain-containing protein;protein_id=WP_001295490.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 285855 286109 . - . ID=gene-AB25_RS15625;Name=yoaF;gbkey=Gene;gene=yoaF;gene_biotype=protein_coding;locus_tag=AB25_RS15625;old_locus_tag=AB25_1929 NZ_JJMC01000027.1 Protein Homology CDS 285855 286109 . - 0 ID=cds-WP_000691930.1;Parent=gene-AB25_RS15625;Dbxref=GenBank:WP_000691930.1;Name=WP_000691930.1;gbkey=CDS;gene=yoaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416307.1;locus_tag=AB25_RS15625;product=DUF333 domain-containing lipoprotein YoaF;protein_id=WP_000691930.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 286292 287317 . + . ID=gene-AB25_RS15620;Name=dgcP;gbkey=Gene;gene=dgcP;gene_biotype=protein_coding;locus_tag=AB25_RS15620;old_locus_tag=AB25_1930 NZ_JJMC01000027.1 Protein Homology CDS 286292 287317 . + 0 ID=cds-WP_032261379.1;Parent=gene-AB25_RS15620;Dbxref=GenBank:WP_032261379.1;Name=WP_032261379.1;gbkey=CDS;gene=dgcP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416308.4;locus_tag=AB25_RS15620;product=diguanylate cyclase DgcP;protein_id=WP_032261379.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 287350 287448 . + . ID=gene-AB25_RS0125215;Name=yoaK;gbkey=Gene;gene=yoaK;gene_biotype=protein_coding;locus_tag=AB25_RS0125215 NZ_JJMC01000027.1 Protein Homology CDS 287350 287448 . + 0 ID=cds-WP_001219350.1;Parent=gene-AB25_RS0125215;Dbxref=GenBank:WP_001219350.1;Name=WP_001219350.1;gbkey=CDS;gene=yoaK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791242.1;locus_tag=AB25_RS0125215;product=YoaK family small membrane protein;protein_id=WP_001219350.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 287451 287525 . + . ID=gene-AB25_RS30260;Name=yoaJ;gbkey=Gene;gene=yoaJ;gene_biotype=protein_coding;locus_tag=AB25_RS30260 NZ_JJMC01000027.1 Protein Homology CDS 287451 287525 . + 0 ID=cds-WP_001386836.1;Parent=gene-AB25_RS30260;Dbxref=GenBank:WP_001386836.1;Name=WP_001386836.1;gbkey=CDS;gene=yoaJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791243.1;locus_tag=AB25_RS30260;product=protein YoaJ;protein_id=WP_001386836.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 287584 287832 . - . ID=gene-AB25_RS15615;Name=yeaQ;gbkey=Gene;gene=yeaQ;gene_biotype=protein_coding;locus_tag=AB25_RS15615;old_locus_tag=AB25_1932 NZ_JJMC01000027.1 Protein Homology CDS 287584 287832 . - 0 ID=cds-WP_000512153.1;Parent=gene-AB25_RS15615;Dbxref=GenBank:WP_000512153.1;Name=WP_000512153.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yeaQ;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310531.1;locus_tag=AB25_RS15615;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000512153.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 287980 288162 . - . ID=gene-AB25_RS15610;Name=yoaG;gbkey=Gene;gene=yoaG;gene_biotype=protein_coding;locus_tag=AB25_RS15610;old_locus_tag=AB25_1933 NZ_JJMC01000027.1 Protein Homology CDS 287980 288162 . - 0 ID=cds-WP_000513737.1;Parent=gene-AB25_RS15610;Dbxref=GenBank:WP_000513737.1;Name=WP_000513737.1;gbkey=CDS;gene=yoaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310532.1;locus_tag=AB25_RS15610;product=DUF1869 domain-containing protein;protein_id=WP_000513737.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 288166 288525 . - . ID=gene-AB25_RS15605;Name=yeaR;gbkey=Gene;gene=yeaR;gene_biotype=protein_coding;locus_tag=AB25_RS15605;old_locus_tag=AB25_1934 NZ_JJMC01000027.1 Protein Homology CDS 288166 288525 . - 0 ID=cds-WP_000939312.1;Parent=gene-AB25_RS15605;Dbxref=GenBank:WP_000939312.1;Name=WP_000939312.1;gbkey=CDS;gene=yeaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310533.1;locus_tag=AB25_RS15605;product=DUF1971 domain-containing protein YeaR;protein_id=WP_000939312.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 288698 289336 . - . ID=gene-AB25_RS15600;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;locus_tag=AB25_RS15600;old_locus_tag=AB25_1936 NZ_JJMC01000027.1 Protein Homology CDS 288698 289336 . - 0 ID=cds-WP_000457207.1;Parent=gene-AB25_RS15600;Dbxref=GenBank:WP_000457207.1;Name=WP_000457207.1;Ontology_term=GO:0006865;gbkey=CDS;gene=leuE;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416312.1;locus_tag=AB25_RS15600;product=leucine efflux protein LeuE;protein_id=WP_000457207.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 289463 290386 . - . ID=gene-AB25_RS15595;Name=dmlR;gbkey=Gene;gene=dmlR;gene_biotype=protein_coding;locus_tag=AB25_RS15595;old_locus_tag=AB25_1937 NZ_JJMC01000027.1 Protein Homology CDS 289463 290386 . - 0 ID=cds-WP_001061578.1;Parent=gene-AB25_RS15595;Dbxref=GenBank:WP_001061578.1;Name=WP_001061578.1;gbkey=CDS;gene=dmlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310535.2;locus_tag=AB25_RS15595;product=DNA-binding transcriptional regulator DmlR;protein_id=WP_001061578.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 290489 291574 . + . ID=gene-AB25_RS15590;Name=dmlA;gbkey=Gene;gene=dmlA;gene_biotype=protein_coding;locus_tag=AB25_RS15590;old_locus_tag=AB25_1938 NZ_JJMC01000027.1 Protein Homology CDS 290489 291574 . + 0 ID=cds-WP_000978494.1;Parent=gene-AB25_RS15590;Dbxref=GenBank:WP_000978494.1;Name=WP_000978494.1;gbkey=CDS;gene=dmlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416314.1;locus_tag=AB25_RS15590;product=multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase;protein_id=WP_000978494.1;transl_table=11 NZ_JJMC01000027.1 RefSeq pseudogene 291825 293436 . + . ID=gene-AB25_RS31115;Name=yeaV;gbkey=Gene;gene=yeaV;gene_biotype=pseudogene;locus_tag=AB25_RS31115;pseudo=true NZ_JJMC01000027.1 Protein Homology CDS 291825 293436 . + 0 ID=cds-AB25_RS31115;Parent=gene-AB25_RS31115;Note=frameshifted;gbkey=CDS;gene=yeaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310537.2;locus_tag=AB25_RS31115;product=BCCT family transporter YeaV;pseudo=true;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 293468 294592 . + . ID=gene-AB25_RS15585;Name=yeaW;gbkey=Gene;gene=yeaW;gene_biotype=protein_coding;locus_tag=AB25_RS15585;old_locus_tag=AB25_1941 NZ_JJMC01000027.1 Protein Homology CDS 293468 294592 . + 0 ID=cds-WP_032170746.1;Parent=gene-AB25_RS15585;Dbxref=GenBank:WP_032170746.1;Name=WP_032170746.1;gbkey=CDS;gene=yeaW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310538.1;locus_tag=AB25_RS15585;product=carnitine monooxygenase%2C oxygenase subunit YeaW;protein_id=WP_032170746.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 294648 295613 . + . ID=gene-AB25_RS15580;Name=yeaX;gbkey=Gene;gene=yeaX;gene_biotype=protein_coding;locus_tag=AB25_RS15580;old_locus_tag=AB25_1942 NZ_JJMC01000027.1 Protein Homology CDS 294648 295613 . + 0 ID=cds-WP_032170749.1;Parent=gene-AB25_RS15580;Dbxref=GenBank:WP_032170749.1;Name=WP_032170749.1;gbkey=CDS;gene=yeaX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416317.1;locus_tag=AB25_RS15580;product=carnitine monooxygenase reductase subunit YeaX;protein_id=WP_032170749.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 295667 296782 . - . ID=gene-AB25_RS15575;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=AB25_RS15575;old_locus_tag=AB25_1943 NZ_JJMC01000027.1 Protein Homology CDS 295667 296782 . - 0 ID=cds-WP_001323996.1;Parent=gene-AB25_RS15575;Dbxref=GenBank:WP_001323996.1;Name=WP_001323996.1;Ontology_term=GO:0008033,GO:0003676,GO:0008408,GO:0033890;gbkey=CDS;gene=rnd;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA,ribonuclease D activity|0033890||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310540.2;locus_tag=AB25_RS15575;product=ribonuclease D;protein_id=WP_001323996.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 296864 298549 . - . ID=gene-AB25_RS15570;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=AB25_RS15570;old_locus_tag=AB25_1944 NZ_JJMC01000027.1 Protein Homology CDS 296864 298549 . - 0 ID=cds-WP_000758422.1;Parent=gene-AB25_RS15570;Dbxref=GenBank:WP_000758422.1;Name=WP_000758422.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416319.1;locus_tag=AB25_RS15570;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=WP_000758422.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 298754 299335 . - . ID=gene-AB25_RS15565;Name=yeaY;gbkey=Gene;gene=yeaY;gene_biotype=protein_coding;locus_tag=AB25_RS15565;old_locus_tag=AB25_1945 NZ_JJMC01000027.1 Protein Homology CDS 298754 299335 . - 0 ID=cds-WP_000290576.1;Parent=gene-AB25_RS15565;Dbxref=GenBank:WP_000290576.1;Name=WP_000290576.1;gbkey=CDS;gene=yeaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416320.1;locus_tag=AB25_RS15565;product=Slp family lipoprotein YeaY;protein_id=WP_000290576.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 299375 300070 . - . ID=gene-AB25_RS15560;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=AB25_RS15560;old_locus_tag=AB25_1946 NZ_JJMC01000027.1 Protein Homology CDS 299375 300070 . - 0 ID=cds-WP_001220987.1;Parent=gene-AB25_RS15560;Dbxref=GenBank:WP_001220987.1;Name=WP_001220987.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310543.1;locus_tag=AB25_RS15560;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_001220987.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 300128 302038 . - . ID=gene-AB25_RS15555;Name=yoaA;gbkey=Gene;gene=yoaA;gene_biotype=protein_coding;locus_tag=AB25_RS15555;old_locus_tag=AB25_1947 NZ_JJMC01000027.1 Protein Homology CDS 300128 302038 . - 0 ID=cds-WP_000128847.1;Parent=gene-AB25_RS15555;Dbxref=GenBank:WP_000128847.1;Name=WP_000128847.1;Ontology_term=GO:0003676,GO:0003677,GO:0004386,GO:0005524;gbkey=CDS;gene=yoaA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310544.1;locus_tag=AB25_RS15555;product=ATP-dependent DNA helicase;protein_id=WP_000128847.1;transl_table=11 NZ_JJMC01000027.1 RefSeq gene 302170 302514 . + . ID=gene-AB25_RS15550;Name=yoaB;gbkey=Gene;gene=yoaB;gene_biotype=protein_coding;locus_tag=AB25_RS15550;old_locus_tag=AB25_1948 NZ_JJMC01000027.1 Protein Homology CDS 302170 302514 . + 0 ID=cds-WP_001295493.1;Parent=gene-AB25_RS15550;Dbxref=GenBank:WP_001295493.1;Name=WP_001295493.1;gbkey=CDS;gene=yoaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416323.4;locus_tag=AB25_RS15550;product=RidA family protein;protein_id=WP_001295493.1;transl_table=11 NZ_JJMC01000027.1 RefSeq pseudogene 302937 303035 . + . ID=gene-AB25_RS32210;Name=AB25_RS32210;end_range=303035,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32210;partial=true;pseudo=true NZ_JJMC01000027.1 Protein Homology CDS 302937 303035 . + 0 ID=cds-AB25_RS32210;Parent=gene-AB25_RS32210;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=303035,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416324.2;locus_tag=AB25_RS32210;partial=true;product=DUF1889 family protein;pseudo=true;transl_table=11 NZ_JJMC01000027.1 RefSeq pseudogene 303053 303637 . - . ID=gene-AB25_RS30275;Name=AB25_RS30275;end_range=303637,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS30275;old_locus_tag=AB25_1950;partial=true;pseudo=true NZ_JJMC01000027.1 Protein Homology CDS 303053 303637 . - 1 ID=cds-AB25_RS30275;Parent=gene-AB25_RS30275;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=303637,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=AB25_RS30275;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJMC01000028.1 1 13527 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000028.1 RefSeq region 1 13527 . + . ID=NZ_JJMC01000028.1:1..13527;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000028.1 RefSeq pseudogene 1 566 . - . ID=gene-AB25_RS15540;Name=AB25_RS15540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS15540;old_locus_tag=AB25_1951;partial=true;pseudo=true;start_range=.,1 NZ_JJMC01000028.1 Protein Homology CDS 1 566 . - 0 ID=cds-AB25_RS15540;Parent=gene-AB25_RS15540;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=AB25_RS15540;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJMC01000028.1 RefSeq pseudogene 634 1571 . + . ID=gene-AB25_RS15535;Name=AB25_RS15535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS15535;old_locus_tag=AB25_1952;pseudo=true NZ_JJMC01000028.1 Protein Homology CDS 634 1571 . + 0 ID=cds-AB25_RS15535;Parent=gene-AB25_RS15535;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032491235.1;locus_tag=AB25_RS15535;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_JJMC01000028.1 RefSeq gene 1731 2535 . + . ID=gene-AB25_RS30280;Name=AB25_RS30280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS30280 NZ_JJMC01000028.1 Protein Homology CDS 1731 2081 . + 0 ID=cds-WP_170851660.1;Parent=gene-AB25_RS30280;Dbxref=GenBank:WP_170851660.1;Name=WP_170851660.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611700.1;locus_tag=AB25_RS30280;product=IS5 family transposase;protein_id=WP_170851660.1;transl_table=11 NZ_JJMC01000028.1 Protein Homology CDS 2083 2535 . + 0 ID=cds-WP_170851660.1;Parent=gene-AB25_RS30280;Dbxref=GenBank:WP_170851660.1;Name=WP_170851660.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611700.1;locus_tag=AB25_RS30280;product=IS5 family transposase;protein_id=WP_170851660.1;transl_table=11 NZ_JJMC01000028.1 RefSeq gene 2764 3909 . + . ID=gene-AB25_RS15525;Name=AB25_RS15525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS15525;old_locus_tag=AB25_1955 NZ_JJMC01000028.1 Protein Homology CDS 2764 3909 . + 0 ID=cds-WP_001618959.1;Parent=gene-AB25_RS15525;Dbxref=GenBank:WP_001618959.1;Name=WP_001618959.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189158.1;locus_tag=AB25_RS15525;product=glycosyltransferase family 4 protein;protein_id=WP_001618959.1;transl_table=11 NZ_JJMC01000028.1 RefSeq gene 3915 4727 . + . ID=gene-AB25_RS15520;Name=AB25_RS15520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS15520;old_locus_tag=AB25_1956 NZ_JJMC01000028.1 Protein Homology CDS 3915 4727 . + 0 ID=cds-WP_024190230.1;Parent=gene-AB25_RS15520;Dbxref=GenBank:WP_024190230.1;Name=WP_024190230.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189155.1;locus_tag=AB25_RS15520;product=ABC transporter permease;protein_id=WP_024190230.1;transl_table=11 NZ_JJMC01000028.1 RefSeq gene 4717 6126 . + . ID=gene-AB25_RS15515;Name=AB25_RS15515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS15515;old_locus_tag=AB25_1957 NZ_JJMC01000028.1 Protein Homology CDS 4717 6126 . + 0 ID=cds-WP_001618957.1;Parent=gene-AB25_RS15515;Dbxref=GenBank:WP_001618957.1;Name=WP_001618957.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189153.1;locus_tag=AB25_RS15515;product=ABC transporter ATP-binding protein;protein_id=WP_001618957.1;transl_table=11 NZ_JJMC01000028.1 RefSeq gene 6131 8248 . + . ID=gene-AB25_RS15510;Name=AB25_RS15510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS15510;old_locus_tag=AB25_1958 NZ_JJMC01000028.1 GeneMarkS-2+ CDS 6131 8248 . + 0 ID=cds-WP_032170707.1;Parent=gene-AB25_RS15510;Dbxref=GenBank:WP_032170707.1;Name=WP_032170707.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB25_RS15510;product=hypothetical protein;protein_id=WP_032170707.1;transl_table=11 NZ_JJMC01000028.1 RefSeq gene 8269 9459 . + . ID=gene-AB25_RS15505;Name=AB25_RS15505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS15505;old_locus_tag=AB25_1959 NZ_JJMC01000028.1 Protein Homology CDS 8269 9459 . + 0 ID=cds-WP_001618955.1;Parent=gene-AB25_RS15505;Dbxref=GenBank:WP_001618955.1;Name=WP_001618955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001618955.1;locus_tag=AB25_RS15505;product=hypothetical protein;protein_id=WP_001618955.1;transl_table=11 NZ_JJMC01000028.1 RefSeq gene 9465 11495 . + . ID=gene-AB25_RS15500;Name=AB25_RS15500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS15500;old_locus_tag=AB25_1960 NZ_JJMC01000028.1 GeneMarkS-2+ CDS 9465 11495 . + 0 ID=cds-WP_001618954.1;Parent=gene-AB25_RS15500;Dbxref=GenBank:WP_001618954.1;Name=WP_001618954.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB25_RS15500;product=hypothetical protein;protein_id=WP_001618954.1;transl_table=11 NZ_JJMC01000028.1 RefSeq gene 11699 12408 . + . ID=gene-AB25_RS15495;Name=AB25_RS15495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS15495;old_locus_tag=AB25_1961 NZ_JJMC01000028.1 Protein Homology CDS 11699 11957 . + 0 ID=cds-WP_224714731.1;Parent=gene-AB25_RS15495;Dbxref=GenBank:WP_224714731.1;Name=WP_224714731.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB25_RS15495;product=IS1-like element IS1A family transposase;protein_id=WP_224714731.1;transl_table=11 NZ_JJMC01000028.1 Protein Homology CDS 11957 12408 . + 2 ID=cds-WP_224714731.1;Parent=gene-AB25_RS15495;Dbxref=GenBank:WP_224714731.1;Name=WP_224714731.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB25_RS15495;product=IS1-like element IS1A family transposase;protein_id=WP_224714731.1;transl_table=11 NZ_JJMC01000028.1 RefSeq gene 12540 13520 . - . ID=gene-AB25_RS15490;Name=AB25_RS15490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS15490;old_locus_tag=AB25_1962 NZ_JJMC01000028.1 Protein Homology CDS 12540 13520 . - 0 ID=cds-WP_000019402.1-2;Parent=gene-AB25_RS15490;Dbxref=GenBank:WP_000019402.1;Name=WP_000019402.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416498.2;locus_tag=AB25_RS15490;product=IS5-like element IS5 family transposase;protein_id=WP_000019402.1;transl_table=11 ##sequence-region NZ_JJMC01000029.1 1 182916 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000029.1 RefSeq region 1 182916 . + . ID=NZ_JJMC01000029.1:1..182916;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000029.1 RefSeq pseudogene 1 585 . + . ID=gene-AB25_RS0125255;Name=AB25_RS0125255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS0125255;old_locus_tag=AB25_1963;partial=true;pseudo=true;start_range=.,1 NZ_JJMC01000029.1 Protein Homology CDS 1 585 . + 1 ID=cds-AB25_RS0125255;Parent=gene-AB25_RS0125255;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB25_RS0125255;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJMC01000029.1 RefSeq pseudogene 600 845 . + . ID=gene-AB25_RS28200;Name=AB25_RS28200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS28200;old_locus_tag=AB25_1964;partial=true;pseudo=true;start_range=.,600 NZ_JJMC01000029.1 Protein Homology CDS 600 845 . + 0 ID=cds-AB25_RS28200;Parent=gene-AB25_RS28200;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000562370.1;locus_tag=AB25_RS28200;partial=true;product=antibiotic biosynthesis monooxygenase family protein;pseudo=true;start_range=.,600;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 838 1224 . + . ID=gene-AB25_RS0125260;Name=AB25_RS0125260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0125260 NZ_JJMC01000029.1 Protein Homology CDS 838 1224 . + 0 ID=cds-WP_000460651.1;Parent=gene-AB25_RS0125260;Dbxref=GenBank:WP_000460651.1;Name=WP_000460651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000460649.1;locus_tag=AB25_RS0125260;product=hypothetical protein;protein_id=WP_000460651.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 1232 1918 . + . ID=gene-AB25_RS0125265;Name=AB25_RS0125265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0125265 NZ_JJMC01000029.1 Protein Homology CDS 1232 1918 . + 0 ID=cds-WP_001284954.1;Parent=gene-AB25_RS0125265;Dbxref=GenBank:WP_001284954.1;Name=WP_001284954.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001284954.1;locus_tag=AB25_RS0125265;product=ArsR/SmtB family transcription factor;protein_id=WP_001284954.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 1896 2519 . - . ID=gene-AB25_RS0125270;Name=tetR(B);gbkey=Gene;gene=tetR(B);gene_biotype=protein_coding;locus_tag=AB25_RS0125270 NZ_JJMC01000029.1 Protein Homology CDS 1896 2519 . - 0 ID=cds-WP_000088605.1;Parent=gene-AB25_RS0125270;Dbxref=GenBank:WP_000088605.1;Name=WP_000088605.1;gbkey=CDS;gene=tetR(B);inference=COORDINATES: similar to AA sequence:RefSeq:WP_000088605.1;locus_tag=AB25_RS0125270;product=tetracycline resistance transcriptional repressor TetR(B);protein_id=WP_000088605.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 2601 3806 . + . ID=gene-AB25_RS15485;Name=tet(B);gbkey=Gene;gene=tet(B);gene_biotype=protein_coding;locus_tag=AB25_RS15485;old_locus_tag=AB25_1966 NZ_JJMC01000029.1 Protein Homology CDS 2601 3806 . + 0 ID=cds-WP_001089068.1;Parent=gene-AB25_RS15485;Dbxref=GenBank:WP_001089068.1;Name=WP_001089068.1;Ontology_term=GO:0015904,GO:0055085,GO:0008493,GO:0022857,GO:0016020;gbkey=CDS;gene=tet(B);go_component=membrane|0016020||IEA;go_function=tetracycline transmembrane transporter activity|0008493||IEA,transmembrane transporter activity|0022857||IEA;go_process=tetracycline transmembrane transport|0015904||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001089064.1;locus_tag=AB25_RS15485;product=tetracycline efflux MFS transporter Tet(B);protein_id=WP_001089068.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 3919 4512 . - . ID=gene-AB25_RS15480;Name=tetC;gbkey=Gene;gene=tetC;gene_biotype=protein_coding;locus_tag=AB25_RS15480;old_locus_tag=AB25_1967 NZ_JJMC01000029.1 Protein Homology CDS 3919 4512 . - 0 ID=cds-WP_000428546.1;Parent=gene-AB25_RS15480;Dbxref=GenBank:WP_000428546.1;Name=WP_000428546.1;Ontology_term=GO:0003677;gbkey=CDS;gene=tetC;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001517796.1;locus_tag=AB25_RS15480;product=tetracyline resistance-associated transcriptional repressor TetC;protein_id=WP_000428546.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 4691 5388 . - . ID=gene-AB25_RS15475;Name=AB25_RS15475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS15475;old_locus_tag=AB25_1968 NZ_JJMC01000029.1 Protein Homology CDS 5139 5388 . - 0 ID=cds-WP_095033700.1;Parent=gene-AB25_RS15475;Dbxref=GenBank:WP_095033700.1;Name=WP_095033700.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=AB25_RS15475;product=IS1-like element IS1B family transposase;protein_id=WP_095033700.1;transl_table=11 NZ_JJMC01000029.1 Protein Homology CDS 4691 5139 . - 2 ID=cds-WP_095033700.1;Parent=gene-AB25_RS15475;Dbxref=GenBank:WP_095033700.1;Name=WP_095033700.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=AB25_RS15475;product=IS1-like element IS1B family transposase;protein_id=WP_095033700.1;transl_table=11 NZ_JJMC01000029.1 RefSeq pseudogene 5433 5651 . + . ID=gene-AB25_RS15470;Name=AB25_RS15470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS15470;old_locus_tag=AB25_1969;partial=true;pseudo=true;start_range=.,5433 NZ_JJMC01000029.1 Protein Homology CDS 5433 5651 . + 0 ID=cds-AB25_RS15470;Parent=gene-AB25_RS15470;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416324.2;locus_tag=AB25_RS15470;partial=true;product=DUF1889 family protein;pseudo=true;start_range=.,5433;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 5771 5950 . - . ID=gene-AB25_RS15465;Name=yoaH;gbkey=Gene;gene=yoaH;gene_biotype=protein_coding;locus_tag=AB25_RS15465;old_locus_tag=AB25_1970 NZ_JJMC01000029.1 Protein Homology CDS 5771 5950 . - 0 ID=cds-WP_000457334.1;Parent=gene-AB25_RS15465;Dbxref=GenBank:WP_000457334.1;Name=WP_000457334.1;gbkey=CDS;gene=yoaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310547.1;locus_tag=AB25_RS15465;product=YoaH family protein;protein_id=WP_000457334.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 6024 7385 . + . ID=gene-AB25_RS15460;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=AB25_RS15460;old_locus_tag=AB25_1971 NZ_JJMC01000029.1 Protein Homology CDS 6024 7385 . + 0 ID=cds-WP_000854972.1;Parent=gene-AB25_RS15460;Dbxref=GenBank:WP_000854972.1;Name=WP_000854972.1;Ontology_term=GO:0009396;gbkey=CDS;gene=pabB;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707310.1;locus_tag=AB25_RS15460;product=aminodeoxychorismate synthase component 1;protein_id=WP_000854972.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 7389 7967 . + . ID=gene-AB25_RS15455;Name=nudL;gbkey=Gene;gene=nudL;gene_biotype=protein_coding;locus_tag=AB25_RS15455;old_locus_tag=AB25_1972 NZ_JJMC01000029.1 Protein Homology CDS 7389 7967 . + 0 ID=cds-WP_000456740.1;Parent=gene-AB25_RS15455;Dbxref=GenBank:WP_000456740.1;Name=WP_000456740.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;gene=nudL;go_function=magnesium ion binding|0000287||IEA,coenzyme A diphosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310549.1;locus_tag=AB25_RS15455;product=CoA pyrophosphatase;protein_id=WP_000456740.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 8151 9515 . + . ID=gene-AB25_RS15450;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=AB25_RS15450;old_locus_tag=AB25_1973 NZ_JJMC01000029.1 Protein Homology CDS 8151 9515 . + 0 ID=cds-WP_000624302.1;Parent=gene-AB25_RS15450;Dbxref=GenBank:WP_000624302.1;Name=WP_000624302.1;gbkey=CDS;gene=sdaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416328.1;locus_tag=AB25_RS15450;product=L-serine ammonia-lyase;protein_id=WP_000624302.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 9646 11244 . + . ID=gene-AB25_RS15445;Name=pdeD;gbkey=Gene;gene=pdeD;gene_biotype=protein_coding;locus_tag=AB25_RS15445;old_locus_tag=AB25_1974 NZ_JJMC01000029.1 Protein Homology CDS 9646 11244 . + 0 ID=cds-WP_015364492.1;Parent=gene-AB25_RS15445;Dbxref=GenBank:WP_015364492.1;Name=WP_015364492.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;gene=pdeD;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416329.4;locus_tag=AB25_RS15445;product=EAL domain-containing protein;protein_id=WP_015364492.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 11248 12804 . - . ID=gene-AB25_RS15440;Name=yoaE;gbkey=Gene;gene=yoaE;gene_biotype=protein_coding;locus_tag=AB25_RS15440;old_locus_tag=AB25_1975 NZ_JJMC01000029.1 Protein Homology CDS 11248 12804 . - 0 ID=cds-WP_000394983.1;Parent=gene-AB25_RS15440;Dbxref=GenBank:WP_000394983.1;Name=WP_000394983.1;gbkey=CDS;gene=yoaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310552.1;locus_tag=AB25_RS15440;product=CNNM family cation transport protein YoaE;protein_id=WP_000394983.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 12792 12950 . - . ID=gene-AB25_RS32690;Name=yoaL;gbkey=Gene;gene=yoaL;gene_biotype=protein_coding;locus_tag=AB25_RS32690 NZ_JJMC01000029.1 Protein Homology CDS 12792 12950 . - 0 ID=cds-WP_001349044.1;Parent=gene-AB25_RS32690;Dbxref=GenBank:WP_001349044.1;Name=WP_001349044.1;gbkey=CDS;gene=yoaL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518795.2;locus_tag=AB25_RS32690;product=protein YoaL;protein_id=WP_001349044.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 13267 14238 . + . ID=gene-AB25_RS15435;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;locus_tag=AB25_RS15435;old_locus_tag=AB25_1976 NZ_JJMC01000029.1 Protein Homology CDS 13267 14238 . + 0 ID=cds-WP_000150543.1;Parent=gene-AB25_RS15435;Dbxref=GenBank:WP_000150543.1;Name=WP_000150543.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=manX;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310554.1;locus_tag=AB25_RS15435;product=PTS mannose transporter subunit IIAB;protein_id=WP_000150543.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 14301 15101 . + . ID=gene-AB25_RS15430;Name=manY;gbkey=Gene;gene=manY;gene_biotype=protein_coding;locus_tag=AB25_RS15430;old_locus_tag=AB25_1977 NZ_JJMC01000029.1 Protein Homology CDS 14301 15101 . + 0 ID=cds-WP_000406926.1;Parent=gene-AB25_RS15430;Dbxref=GenBank:WP_000406926.1;Name=WP_000406926.1;gbkey=CDS;gene=manY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910918.1;locus_tag=AB25_RS15430;product=PTS mannose transporter subunit IIC;protein_id=WP_000406926.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 15114 15965 . + . ID=gene-AB25_RS15425;Name=manZ;gbkey=Gene;gene=manZ;gene_biotype=protein_coding;locus_tag=AB25_RS15425;old_locus_tag=AB25_1978 NZ_JJMC01000029.1 Protein Homology CDS 15114 15965 . + 0 ID=cds-WP_000228655.1;Parent=gene-AB25_RS15425;Dbxref=GenBank:WP_000228655.1;Name=WP_000228655.1;gbkey=CDS;gene=manZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020804907.1;locus_tag=AB25_RS15425;product=PTS mannose transporter subunit IID;protein_id=WP_000228655.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 16020 16478 . + . ID=gene-AB25_RS0125280;Name=yobD;gbkey=Gene;gene=yobD;gene_biotype=protein_coding;locus_tag=AB25_RS0125280 NZ_JJMC01000029.1 Protein Homology CDS 16020 16478 . + 0 ID=cds-WP_000156255.1;Parent=gene-AB25_RS0125280;Dbxref=GenBank:WP_000156255.1;Name=WP_000156255.1;gbkey=CDS;gene=yobD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416334.1;locus_tag=AB25_RS0125280;product=DUF986 family protein;protein_id=WP_000156255.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 16907 17473 . + . ID=gene-AB25_RS15420;Name=mntP;gbkey=Gene;gene=mntP;gene_biotype=protein_coding;locus_tag=AB25_RS15420;old_locus_tag=AB25_1981 NZ_JJMC01000029.1 Protein Homology CDS 16907 17473 . + 0 ID=cds-WP_001296134.1;Parent=gene-AB25_RS15420;Dbxref=GenBank:WP_001296134.1;Name=WP_001296134.1;gbkey=CDS;gene=mntP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416335.4;locus_tag=AB25_RS15420;product=manganese efflux pump MntP;protein_id=WP_001296134.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 17470 18279 . - . ID=gene-AB25_RS15415;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=protein_coding;locus_tag=AB25_RS15415;old_locus_tag=AB25_1982 NZ_JJMC01000029.1 Protein Homology CDS 17470 18279 . - 0 ID=cds-WP_000010115.1;Parent=gene-AB25_RS15415;Dbxref=GenBank:WP_000010115.1;Name=WP_000010115.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmA;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416336.1;locus_tag=AB25_RS15415;product=23S rRNA (guanine(745)-N(1))-methyltransferase;protein_id=WP_000010115.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 18445 18654 . - . ID=gene-AB25_RS15410;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=AB25_RS15410;old_locus_tag=AB25_1983 NZ_JJMC01000029.1 Protein Homology CDS 18445 18654 . - 0 ID=cds-WP_001062678.1;Parent=gene-AB25_RS15410;Dbxref=GenBank:WP_001062678.1;Name=WP_001062678.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310560.1;locus_tag=AB25_RS15410;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_001062678.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 18667 18810 . - . ID=gene-AB25_RS15405;Name=yobF;gbkey=Gene;gene=yobF;gene_biotype=protein_coding;locus_tag=AB25_RS15405;old_locus_tag=AB25_1984 NZ_JJMC01000029.1 Protein Homology CDS 18667 18810 . - 0 ID=cds-WP_001295496.1;Parent=gene-AB25_RS15405;Dbxref=GenBank:WP_001295496.1;Name=WP_001295496.1;gbkey=CDS;gene=yobF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416338.1;locus_tag=AB25_RS15405;product=DUF2627 domain-containing protein;protein_id=WP_001295496.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 19479 19766 . - . ID=gene-AB25_RS15400;Name=yebO;gbkey=Gene;gene=yebO;gene_biotype=protein_coding;locus_tag=AB25_RS15400;old_locus_tag=AB25_1985 NZ_JJMC01000029.1 Protein Homology CDS 19479 19766 . - 0 ID=cds-WP_001006866.1;Parent=gene-AB25_RS15400;Dbxref=GenBank:WP_001006866.1;Name=WP_001006866.1;gbkey=CDS;gene=yebO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416339.1;locus_tag=AB25_RS15400;product=YebO family protein;protein_id=WP_001006866.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 19841 19984 . - . ID=gene-AB25_RS15395;Name=mgrB;gbkey=Gene;gene=mgrB;gene_biotype=protein_coding;locus_tag=AB25_RS15395;old_locus_tag=AB25_1986 NZ_JJMC01000029.1 Protein Homology CDS 19841 19984 . - 0 ID=cds-WP_000714550.1;Parent=gene-AB25_RS15395;Dbxref=GenBank:WP_000714550.1;Name=WP_000714550.1;gbkey=CDS;gene=mgrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416340.1;locus_tag=AB25_RS15395;product=PhoP/PhoQ regulator MgrB;protein_id=WP_000714550.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 20143 20382 . + . ID=gene-AB25_RS0125295;Name=yobH;gbkey=Gene;gene=yobH;gene_biotype=protein_coding;locus_tag=AB25_RS0125295 NZ_JJMC01000029.1 Protein Homology CDS 20143 20382 . + 0 ID=cds-WP_001211011.1;Parent=gene-AB25_RS0125295;Dbxref=GenBank:WP_001211011.1;Name=WP_001211011.1;gbkey=CDS;gene=yobH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588456.1;locus_tag=AB25_RS0125295;product=YobH family protein;protein_id=WP_001211011.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 20525 21316 . - . ID=gene-AB25_RS15390;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=protein_coding;locus_tag=AB25_RS15390;old_locus_tag=AB25_1987 NZ_JJMC01000029.1 Protein Homology CDS 20525 21316 . - 0 ID=cds-WP_001262192.1;Parent=gene-AB25_RS15390;Dbxref=GenBank:WP_001262192.1;Name=WP_001262192.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=kdgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416341.1;locus_tag=AB25_RS15390;product=DNA-binding transcriptional regulator KdgR;protein_id=WP_001262192.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 21493 22866 . + . ID=gene-AB25_RS15385;Name=yebQ;gbkey=Gene;gene=yebQ;gene_biotype=protein_coding;locus_tag=AB25_RS15385;old_locus_tag=AB25_1988 NZ_JJMC01000029.1 Protein Homology CDS 21493 22866 . + 0 ID=cds-WP_001127216.1;Parent=gene-AB25_RS15385;Dbxref=GenBank:WP_001127216.1;Name=WP_001127216.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yebQ;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416342.4;locus_tag=AB25_RS15385;product=MFS transporter;protein_id=WP_001127216.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 22912 23793 . - . ID=gene-AB25_RS15380;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=AB25_RS15380;old_locus_tag=AB25_1989 NZ_JJMC01000029.1 Protein Homology CDS 22912 23793 . - 0 ID=cds-WP_001433082.1;Parent=gene-AB25_RS15380;Dbxref=GenBank:WP_001433082.1;Name=WP_001433082.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229823.1;locus_tag=AB25_RS15380;product=protease HtpX;protein_id=WP_001433082.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 23985 26033 . - . ID=gene-AB25_RS15375;Name=prc;gbkey=Gene;gene=prc;gene_biotype=protein_coding;locus_tag=AB25_RS15375;old_locus_tag=AB25_1990 NZ_JJMC01000029.1 Protein Homology CDS 23985 26033 . - 0 ID=cds-WP_032170763.1;Parent=gene-AB25_RS15375;Dbxref=GenBank:WP_032170763.1;Name=WP_032170763.1;Ontology_term=GO:0006508,GO:0005515,GO:0008236;gbkey=CDS;gene=prc;go_function=protein binding|0005515||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310567.1;locus_tag=AB25_RS15375;product=carboxy terminal-processing peptidase;protein_id=WP_032170763.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 26053 26751 . - . ID=gene-AB25_RS15370;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=AB25_RS15370;old_locus_tag=AB25_1991 NZ_JJMC01000029.1 Protein Homology CDS 26053 26751 . - 0 ID=cds-WP_000431370.1;Parent=gene-AB25_RS15370;Dbxref=GenBank:WP_000431370.1;Name=WP_000431370.1;Ontology_term=GO:0010608,GO:0003723,GO:0033592,GO:0034057;gbkey=CDS;gene=proQ;go_function=RNA binding|0003723||IEA,RNA strand annealing activity|0033592||IEA,RNA strand-exchange activity|0034057||IEA;go_process=post-transcriptional regulation of gene expression|0010608||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707288.3;locus_tag=AB25_RS15370;product=RNA chaperone ProQ;protein_id=WP_000431370.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 26848 27345 . - . ID=gene-AB25_RS15365;Name=msrC;gbkey=Gene;gene=msrC;gene_biotype=protein_coding;locus_tag=AB25_RS15365;old_locus_tag=AB25_1992 NZ_JJMC01000029.1 Protein Homology CDS 26848 27345 . - 0 ID=cds-WP_001043882.1;Parent=gene-AB25_RS15365;Dbxref=GenBank:WP_001043882.1;Name=WP_001043882.1;gbkey=CDS;gene=msrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707287.1;locus_tag=AB25_RS15365;product=L-methionine (R)-S-oxide reductase;protein_id=WP_001043882.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 27475 28758 . + . ID=gene-AB25_RS15360;Name=yebS;gbkey=Gene;gene=yebS;gene_biotype=protein_coding;locus_tag=AB25_RS15360;old_locus_tag=AB25_1993 NZ_JJMC01000029.1 Protein Homology CDS 27475 28758 . + 0 ID=cds-WP_001207282.1;Parent=gene-AB25_RS15360;Dbxref=GenBank:WP_001207282.1;Name=WP_001207282.1;gbkey=CDS;gene=yebS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310570.1;locus_tag=AB25_RS15360;product=membrane integrity lipid transport subunit YebS;protein_id=WP_001207282.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 28727 31360 . + . ID=gene-AB25_RS15355;Name=yebT;gbkey=Gene;gene=yebT;gene_biotype=protein_coding;locus_tag=AB25_RS15355;old_locus_tag=AB25_1994 NZ_JJMC01000029.1 Protein Homology CDS 28727 31360 . + 0 ID=cds-WP_001356288.1;Parent=gene-AB25_RS15355;Dbxref=GenBank:WP_001356288.1;Name=WP_001356288.1;gbkey=CDS;gene=yebT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416348.2;locus_tag=AB25_RS15355;product=lipid-binding membrane homeostasis protein YebT;protein_id=WP_001356288.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 31440 32879 . + . ID=gene-AB25_RS15350;Name=rsmF;gbkey=Gene;gene=rsmF;gene_biotype=protein_coding;locus_tag=AB25_RS15350;old_locus_tag=AB25_1995 NZ_JJMC01000029.1 Protein Homology CDS 31440 32879 . + 0 ID=cds-WP_000057023.1;Parent=gene-AB25_RS15350;Dbxref=GenBank:WP_000057023.1;Name=WP_000057023.1;Ontology_term=GO:0001510,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmF;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416349.2;locus_tag=AB25_RS15350;product=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;protein_id=WP_000057023.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 32997 33233 . + . ID=gene-AB25_RS15345;Name=yebV;gbkey=Gene;gene=yebV;gene_biotype=protein_coding;locus_tag=AB25_RS15345;old_locus_tag=AB25_1996 NZ_JJMC01000029.1 Protein Homology CDS 32997 33233 . + 0 ID=cds-WP_001295499.1;Parent=gene-AB25_RS15345;Dbxref=GenBank:WP_001295499.1;Name=WP_001295499.1;gbkey=CDS;gene=yebV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707284.2;locus_tag=AB25_RS15345;product=YebV family protein;protein_id=WP_001295499.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 33338 33529 . + . ID=gene-AB25_RS15340;Name=yebW;gbkey=Gene;gene=yebW;gene_biotype=protein_coding;locus_tag=AB25_RS15340;old_locus_tag=AB25_1997 NZ_JJMC01000029.1 Protein Homology CDS 33338 33529 . + 0 ID=cds-WP_001296140.1;Parent=gene-AB25_RS15340;Dbxref=GenBank:WP_001296140.1;Name=WP_001296140.1;gbkey=CDS;gene=yebW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416351.2;locus_tag=AB25_RS15340;product=YebW family protein;protein_id=WP_001296140.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 33530 34186 . - . ID=gene-AB25_RS15335;Name=pphA;gbkey=Gene;gene=pphA;gene_biotype=protein_coding;locus_tag=AB25_RS15335;old_locus_tag=AB25_1998 NZ_JJMC01000029.1 Protein Homology CDS 33530 34186 . - 0 ID=cds-WP_000812724.1;Parent=gene-AB25_RS15335;Dbxref=GenBank:WP_000812724.1;Name=WP_000812724.1;Ontology_term=GO:0016787;gbkey=CDS;gene=pphA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416352.4;locus_tag=AB25_RS15335;product=protein-serine/threonine phosphatase;protein_id=WP_000812724.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 34582 34923 . - . ID=gene-AB25_RS15330;Name=yebY;gbkey=Gene;gene=yebY;gene_biotype=protein_coding;locus_tag=AB25_RS15330;old_locus_tag=AB25_1999 NZ_JJMC01000029.1 Protein Homology CDS 34582 34923 . - 0 ID=cds-WP_000976492.1;Parent=gene-AB25_RS15330;Dbxref=GenBank:WP_000976492.1;Name=WP_000976492.1;gbkey=CDS;gene=yebY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310576.1;locus_tag=AB25_RS15330;product=YebY family protein;protein_id=WP_000976492.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 34936 35808 . - . ID=gene-AB25_RS15325;Name=copD;gbkey=Gene;gene=copD;gene_biotype=protein_coding;locus_tag=AB25_RS15325;old_locus_tag=AB25_2000 NZ_JJMC01000029.1 Protein Homology CDS 34936 35808 . - 0 ID=cds-WP_000879280.1;Parent=gene-AB25_RS15325;Dbxref=GenBank:WP_000879280.1;Name=WP_000879280.1;Ontology_term=GO:0006825,GO:0016020;gbkey=CDS;gene=copD;go_component=membrane|0016020||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416354.1;locus_tag=AB25_RS15325;product=copper homeostasis membrane protein CopD;protein_id=WP_000879280.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 35812 36186 . - . ID=gene-AB25_RS15320;Name=yobA;gbkey=Gene;gene=yobA;gene_biotype=protein_coding;locus_tag=AB25_RS15320;old_locus_tag=AB25_2001 NZ_JJMC01000029.1 Protein Homology CDS 35812 36186 . - 0 ID=cds-WP_000204699.1;Parent=gene-AB25_RS15320;Dbxref=GenBank:WP_000204699.1;Name=WP_000204699.1;Ontology_term=GO:0006825,GO:0046688,GO:0005507;gbkey=CDS;gene=yobA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416355.1;locus_tag=AB25_RS15320;product=CopC domain-containing protein YobA;protein_id=WP_000204699.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 36325 36555 . + . ID=gene-AB25_RS15315;Name=holE;gbkey=Gene;gene=holE;gene_biotype=protein_coding;locus_tag=AB25_RS15315;old_locus_tag=AB25_2002 NZ_JJMC01000029.1 Protein Homology CDS 36325 36555 . + 0 ID=cds-WP_000916763.1;Parent=gene-AB25_RS15315;Dbxref=GenBank:WP_000916763.1;Name=WP_000916763.1;gbkey=CDS;gene=holE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310579.1;locus_tag=AB25_RS15315;product=DNA polymerase III subunit theta;protein_id=WP_000916763.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 36657 37313 . + . ID=gene-AB25_RS15310;Name=yobB;gbkey=Gene;gene=yobB;gene_biotype=protein_coding;locus_tag=AB25_RS15310;old_locus_tag=AB25_2003 NZ_JJMC01000029.1 Protein Homology CDS 36657 37313 . + 0 ID=cds-WP_000011658.1;Parent=gene-AB25_RS15310;Dbxref=GenBank:WP_000011658.1;Name=WP_000011658.1;gbkey=CDS;gene=yobB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416357.1;locus_tag=AB25_RS15310;product=carbon-nitrogen hydrolase family protein YobB;protein_id=WP_000011658.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 37337 37999 . + . ID=gene-AB25_RS15305;Name=exoX;gbkey=Gene;gene=exoX;gene_biotype=protein_coding;locus_tag=AB25_RS15305;old_locus_tag=AB25_2004 NZ_JJMC01000029.1 Protein Homology CDS 37337 37999 . + 0 ID=cds-WP_000944256.1;Parent=gene-AB25_RS15305;Dbxref=GenBank:WP_000944256.1;Name=WP_000944256.1;gbkey=CDS;gene=exoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416358.1;locus_tag=AB25_RS15305;product=exodeoxyribonuclease X;protein_id=WP_000944256.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 37996 40056 . - . ID=gene-AB25_RS15300;Name=ptrB;gbkey=Gene;gene=ptrB;gene_biotype=protein_coding;locus_tag=AB25_RS15300;old_locus_tag=AB25_2005 NZ_JJMC01000029.1 Protein Homology CDS 37996 40056 . - 0 ID=cds-WP_000936951.1;Parent=gene-AB25_RS15300;Dbxref=GenBank:WP_000936951.1;Name=WP_000936951.1;gbkey=CDS;gene=ptrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416359.1;locus_tag=AB25_RS15300;product=oligopeptidase B;protein_id=WP_000936951.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 40265 40924 . - . ID=gene-AB25_RS15295;Name=yebE;gbkey=Gene;gene=yebE;gene_biotype=protein_coding;locus_tag=AB25_RS15295;old_locus_tag=AB25_2006 NZ_JJMC01000029.1 Protein Homology CDS 40265 40924 . - 0 ID=cds-WP_000024745.1;Parent=gene-AB25_RS15295;Dbxref=GenBank:WP_000024745.1;Name=WP_000024745.1;gbkey=CDS;gene=yebE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310583.1;locus_tag=AB25_RS15295;product=tellurite resistance TerB family protein;protein_id=WP_000024745.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 41251 41607 . - . ID=gene-AB25_RS15290;Name=yebF;gbkey=Gene;gene=yebF;gene_biotype=protein_coding;locus_tag=AB25_RS15290;old_locus_tag=AB25_2007 NZ_JJMC01000029.1 Protein Homology CDS 41251 41607 . - 0 ID=cds-WP_001295500.1;Parent=gene-AB25_RS15290;Dbxref=GenBank:WP_001295500.1;Name=WP_001295500.1;gbkey=CDS;gene=yebF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310584.2;locus_tag=AB25_RS15290;product=protein YebF;protein_id=WP_001295500.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 41674 41964 . - . ID=gene-AB25_RS15285;Name=yebG;gbkey=Gene;gene=yebG;gene_biotype=protein_coding;locus_tag=AB25_RS15285;old_locus_tag=AB25_2008 NZ_JJMC01000029.1 Protein Homology CDS 41674 41964 . - 0 ID=cds-WP_000257738.1;Parent=gene-AB25_RS15285;Dbxref=GenBank:WP_000257738.1;Name=WP_000257738.1;gbkey=CDS;gene=yebG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310585.1;locus_tag=AB25_RS15285;product=DNA damage-inducible protein YebG;protein_id=WP_000257738.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 42098 43276 . + . ID=gene-AB25_RS15280;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=AB25_RS15280;old_locus_tag=AB25_2009 NZ_JJMC01000029.1 Protein Homology CDS 42098 43276 . + 0 ID=cds-WP_000173475.1;Parent=gene-AB25_RS15280;Dbxref=GenBank:WP_000173475.1;Name=WP_000173475.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310586.1;locus_tag=AB25_RS15280;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_000173475.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 43332 43973 . - . ID=gene-AB25_RS15275;Name=kdgA;gbkey=Gene;gene=kdgA;gene_biotype=protein_coding;gene_synonym=eda;locus_tag=AB25_RS15275;old_locus_tag=AB25_2010 NZ_JJMC01000029.1 Protein Homology CDS 43332 43973 . - 0 ID=cds-WP_000800512.1;Parent=gene-AB25_RS15275;Dbxref=GenBank:WP_000800512.1;Name=WP_000800512.1;gbkey=CDS;gene=kdgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310587.1;locus_tag=AB25_RS15275;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_000800512.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 44010 45821 . - . ID=gene-AB25_RS15270;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=AB25_RS15270;old_locus_tag=AB25_2011 NZ_JJMC01000029.1 Protein Homology CDS 44010 45821 . - 0 ID=cds-WP_001069467.1;Parent=gene-AB25_RS15270;Dbxref=GenBank:WP_001069467.1;Name=WP_001069467.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310588.1;locus_tag=AB25_RS15270;product=phosphogluconate dehydratase;protein_id=WP_001069467.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 46056 47531 . - . ID=gene-AB25_RS15265;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=AB25_RS15265;old_locus_tag=AB25_2012 NZ_JJMC01000029.1 Protein Homology CDS 46056 47531 . - 0 ID=cds-WP_000301727.1;Parent=gene-AB25_RS15265;Dbxref=GenBank:WP_000301727.1;Name=WP_000301727.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120712.1;locus_tag=AB25_RS15265;product=glucose-6-phosphate dehydrogenase;protein_id=WP_000301727.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 47869 48738 . + . ID=gene-AB25_RS15260;Name=hexR;gbkey=Gene;gene=hexR;gene_biotype=protein_coding;gene_synonym=yebK;locus_tag=AB25_RS15260;old_locus_tag=AB25_2013 NZ_JJMC01000029.1 Protein Homology CDS 47869 48738 . + 0 ID=cds-WP_001056694.1;Parent=gene-AB25_RS15260;Dbxref=GenBank:WP_001056694.1;Name=WP_001056694.1;gbkey=CDS;gene=hexR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310590.1;locus_tag=AB25_RS15260;product=DNA-binding transcriptional regulator HexR;protein_id=WP_001056694.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 48866 50308 . + . ID=gene-AB25_RS15255;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=AB25_RS15255;old_locus_tag=AB25_2014 NZ_JJMC01000029.1 Protein Homology CDS 48866 50308 . + 0 ID=cds-WP_000091176.1;Parent=gene-AB25_RS15255;Dbxref=GenBank:WP_000091176.1;Name=WP_000091176.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120709.1;locus_tag=AB25_RS15255;product=pyruvate kinase;protein_id=WP_000091176.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 50439 51410 . - . ID=gene-AB25_RS15250;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=AB25_RS15250;old_locus_tag=AB25_2015 NZ_JJMC01000029.1 Protein Homology CDS 50439 51410 . - 0 ID=cds-WP_000448381.1;Parent=gene-AB25_RS15250;Dbxref=GenBank:WP_000448381.1;Name=WP_000448381.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009103,GO:0016747,GO:0009276,GO:0016020;gbkey=CDS;gene=lpxM;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416369.1;locus_tag=AB25_RS15250;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WP_000448381.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 51530 52852 . - . ID=gene-AB25_RS15245;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=protein_coding;locus_tag=AB25_RS15245;old_locus_tag=AB25_2016 NZ_JJMC01000029.1 Protein Homology CDS 51530 52852 . - 0 ID=cds-WP_001184045.1;Parent=gene-AB25_RS15245;Dbxref=GenBank:WP_001184045.1;Name=WP_001184045.1;Ontology_term=GO:0042834;gbkey=CDS;gene=mepM;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707716.1;locus_tag=AB25_RS15245;product=murein DD-endopeptidase MepM;protein_id=WP_001184045.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 52868 53800 . - . ID=gene-AB25_RS15240;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=AB25_RS15240;old_locus_tag=AB25_2017 NZ_JJMC01000029.1 Protein Homology CDS 52868 53800 . - 0 ID=cds-WP_032170795.1;Parent=gene-AB25_RS15240;Dbxref=GenBank:WP_032170795.1;Name=WP_032170795.1;Ontology_term=GO:0006829,GO:0046872;gbkey=CDS;gene=znuA;go_function=metal ion binding|0046872||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416371.4;locus_tag=AB25_RS15240;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=WP_032170795.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 53879 54634 . + . ID=gene-AB25_RS15235;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=AB25_RS15235;old_locus_tag=AB25_2018 NZ_JJMC01000029.1 Protein Homology CDS 53879 54634 . + 0 ID=cds-WP_000202996.1;Parent=gene-AB25_RS15235;Dbxref=GenBank:WP_000202996.1;Name=WP_000202996.1;Ontology_term=GO:0006829,GO:0005524,GO:0015633;gbkey=CDS;gene=znuC;go_function=ATP binding|0005524||IEA,ABC-type zinc transporter activity|0015633||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310595.1;locus_tag=AB25_RS15235;product=zinc ABC transporter ATP-binding protein ZnuC;protein_id=WP_000202996.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 54631 55416 . + . ID=gene-AB25_RS15230;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=AB25_RS15230;old_locus_tag=AB25_2019 NZ_JJMC01000029.1 Protein Homology CDS 54631 55416 . + 0 ID=cds-WP_000571479.1;Parent=gene-AB25_RS15230;Dbxref=GenBank:WP_000571479.1;Name=WP_000571479.1;Ontology_term=GO:0055085,GO:0042626;gbkey=CDS;gene=znuB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416373.1;locus_tag=AB25_RS15230;product=zinc ABC transporter permease subunit ZnuB;protein_id=WP_000571479.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 55563 56573 . - . ID=gene-AB25_RS15225;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=AB25_RS15225;old_locus_tag=AB25_2020 NZ_JJMC01000029.1 Protein Homology CDS 55563 56573 . - 0 ID=cds-WP_000568519.1;Parent=gene-AB25_RS15225;Dbxref=GenBank:WP_000568519.1;Name=WP_000568519.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310597.1;locus_tag=AB25_RS15225;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_000568519.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 56582 57193 . - . ID=gene-AB25_RS15220;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=AB25_RS15220;old_locus_tag=AB25_2021 NZ_JJMC01000029.1 Protein Homology CDS 56582 57193 . - 0 ID=cds-WP_000580323.1;Parent=gene-AB25_RS15220;Dbxref=GenBank:WP_000580323.1;Name=WP_000580323.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131997.1;locus_tag=AB25_RS15220;product=Holliday junction branch migration protein RuvA;protein_id=WP_000580323.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 57332 57397 . - . ID=gene-AB25_RS30295;Name=yobI;gbkey=Gene;gene=yobI;gene_biotype=protein_coding;locus_tag=AB25_RS30295 NZ_JJMC01000029.1 Protein Homology CDS 57332 57397 . - 0 ID=cds-WP_001386853.1;Parent=gene-AB25_RS30295;Dbxref=GenBank:WP_001386853.1;Name=WP_001386853.1;gbkey=CDS;gene=yobI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791244.1;locus_tag=AB25_RS30295;product=stress response small protein YobI;protein_id=WP_001386853.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 57468 58070 . + . ID=gene-AB25_RS15215;Name=yebB;gbkey=Gene;gene=yebB;gene_biotype=protein_coding;locus_tag=AB25_RS15215;old_locus_tag=AB25_2022 NZ_JJMC01000029.1 Protein Homology CDS 57468 58070 . + 0 ID=cds-WP_001024930.1;Parent=gene-AB25_RS15215;Dbxref=GenBank:WP_001024930.1;Name=WP_001024930.1;gbkey=CDS;gene=yebB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416376.2;locus_tag=AB25_RS15215;product=YebB family permuted papain-like enzyme;protein_id=WP_001024930.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 58072 58593 . - . ID=gene-AB25_RS15210;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=AB25_RS15210;old_locus_tag=AB25_2023 NZ_JJMC01000029.1 Protein Homology CDS 58072 58593 . - 0 ID=cds-WP_001295503.1;Parent=gene-AB25_RS15210;Dbxref=GenBank:WP_001295503.1;Name=WP_001295503.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005068993.1;locus_tag=AB25_RS15210;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_001295503.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 58628 59368 . - . ID=gene-AB25_RS15205;Name=yebC;gbkey=Gene;gene=yebC;gene_biotype=protein_coding;locus_tag=AB25_RS15205;old_locus_tag=AB25_2024 NZ_JJMC01000029.1 Protein Homology CDS 58628 59368 . - 0 ID=cds-WP_000907248.1;Parent=gene-AB25_RS15205;Dbxref=GenBank:WP_000907248.1;Name=WP_000907248.1;gbkey=CDS;gene=yebC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907250.1;locus_tag=AB25_RS15205;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000907248.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 59397 59849 . - . ID=gene-AB25_RS15200;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=AB25_RS15200;old_locus_tag=AB25_2025 NZ_JJMC01000029.1 Protein Homology CDS 59397 59849 . - 0 ID=cds-WP_001443602.1;Parent=gene-AB25_RS15200;Dbxref=GenBank:WP_001443602.1;Name=WP_001443602.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416379.1;locus_tag=AB25_RS15200;product=dihydroneopterin triphosphate diphosphatase;protein_id=WP_001443602.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 59967 61739 . - . ID=gene-AB25_RS15195;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=AB25_RS15195;old_locus_tag=AB25_2026 NZ_JJMC01000029.1 Protein Homology CDS 59967 61739 . - 0 ID=cds-WP_001258662.1;Parent=gene-AB25_RS15195;Dbxref=GenBank:WP_001258662.1;Name=WP_001258662.1;Ontology_term=GO:0006422,GO:0004815,GO:0005524,GO:0005737;gbkey=CDS;gene=aspS;go_component=cytoplasm|0005737||IEA;go_function=aspartate-tRNA ligase activity|0004815||IEA,ATP binding|0005524||IEA;go_process=aspartyl-tRNA aminoacylation|0006422||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416380.1;locus_tag=AB25_RS15195;product=aspartate--tRNA ligase;protein_id=WP_001258662.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 62049 62615 . + . ID=gene-AB25_RS15190;Name=yecD;gbkey=Gene;gene=yecD;gene_biotype=protein_coding;locus_tag=AB25_RS15190;old_locus_tag=AB25_2027 NZ_JJMC01000029.1 Protein Homology CDS 62049 62615 . + 0 ID=cds-WP_000891618.1;Parent=gene-AB25_RS15190;Dbxref=GenBank:WP_000891618.1;Name=WP_000891618.1;gbkey=CDS;gene=yecD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416381.2;locus_tag=AB25_RS15190;product=hydrolase;protein_id=WP_000891618.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 62612 63430 . + . ID=gene-AB25_RS15185;Name=yecE;gbkey=Gene;gene=yecE;gene_biotype=protein_coding;locus_tag=AB25_RS15185;old_locus_tag=AB25_2028 NZ_JJMC01000029.1 Protein Homology CDS 62612 63430 . + 0 ID=cds-WP_000639274.1;Parent=gene-AB25_RS15185;Dbxref=GenBank:WP_000639274.1;Name=WP_000639274.1;gbkey=CDS;gene=yecE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416382.1;locus_tag=AB25_RS15185;product=DUF72 domain-containing protein;protein_id=WP_000639274.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 63483 63878 . + . ID=gene-AB25_RS15180;Name=yecN;gbkey=Gene;gene=yecN;gene_biotype=protein_coding;locus_tag=AB25_RS15180;old_locus_tag=AB25_2029 NZ_JJMC01000029.1 Protein Homology CDS 63483 63878 . + 0 ID=cds-WP_001356287.1;Parent=gene-AB25_RS15180;Dbxref=GenBank:WP_001356287.1;Name=WP_001356287.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yecN;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310606.2;locus_tag=AB25_RS15180;product=MAPEG family protein;protein_id=WP_001356287.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 63919 64662 . + . ID=gene-AB25_RS15175;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=AB25_RS15175;old_locus_tag=AB25_2030 NZ_JJMC01000029.1 Protein Homology CDS 63919 64662 . + 0 ID=cds-WP_000019588.1;Parent=gene-AB25_RS15175;Dbxref=GenBank:WP_000019588.1;Name=WP_000019588.1;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310607.1;locus_tag=AB25_RS15175;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=WP_000019588.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 64659 65630 . + . ID=gene-AB25_RS15170;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=AB25_RS15170;old_locus_tag=AB25_2031 NZ_JJMC01000029.1 Protein Homology CDS 64659 65630 . + 0 ID=cds-WP_000564745.1;Parent=gene-AB25_RS15170;Dbxref=GenBank:WP_000564745.1;Name=WP_000564745.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707759.1;locus_tag=AB25_RS15170;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=WP_000564745.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 65795 68224 . - . ID=gene-AB25_RS15165;Name=torZ;gbkey=Gene;gene=torZ;gene_biotype=protein_coding;locus_tag=AB25_RS15165;old_locus_tag=AB25_2032 NZ_JJMC01000029.1 Protein Homology CDS 65795 68224 . - 0 ID=cds-WP_000176828.1;Parent=gene-AB25_RS15165;Dbxref=GenBank:WP_000176828.1;Name=WP_000176828.1;gbkey=CDS;gene=torZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310609.2;locus_tag=AB25_RS15165;product=trimethylamine N-oxide reductase TorZ;protein_id=WP_000176828.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 68249 69349 . - . ID=gene-AB25_RS15160;Name=torY;gbkey=Gene;gene=torY;gene_biotype=protein_coding;locus_tag=AB25_RS15160;old_locus_tag=AB25_2033 NZ_JJMC01000029.1 Protein Homology CDS 68249 69349 . - 0 ID=cds-WP_001214299.1;Parent=gene-AB25_RS15160;Dbxref=GenBank:WP_001214299.1;Name=WP_001214299.1;gbkey=CDS;gene=torY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707761.2;locus_tag=AB25_RS15160;product=NapC/NirT family cytochrome c;protein_id=WP_001214299.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 69737 70483 . - . ID=gene-AB25_RS15155;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=AB25_RS15155;old_locus_tag=AB25_2034 NZ_JJMC01000029.1 Protein Homology CDS 69737 70483 . - 0 ID=cds-WP_001185741.1;Parent=gene-AB25_RS15155;Dbxref=GenBank:WP_001185741.1;Name=WP_001185741.1;Ontology_term=GO:0055070,GO:0005507;gbkey=CDS;gene=cutC;go_function=copper ion binding|0005507||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025309.2;locus_tag=AB25_RS15155;product=copper homeostasis protein CutC;protein_id=WP_001185741.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 70497 71063 . - . ID=gene-AB25_RS15150;Name=yecM;gbkey=Gene;gene=yecM;gene_biotype=protein_coding;locus_tag=AB25_RS15150;old_locus_tag=AB25_2035 NZ_JJMC01000029.1 Protein Homology CDS 70497 71063 . - 0 ID=cds-WP_001326063.1;Parent=gene-AB25_RS15150;Dbxref=GenBank:WP_001326063.1;Name=WP_001326063.1;gbkey=CDS;gene=yecM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310612.2;locus_tag=AB25_RS15150;product=VOC family protein;protein_id=WP_001326063.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 71279 73012 . + . ID=gene-AB25_RS15145;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=AB25_RS15145;old_locus_tag=AB25_2036 NZ_JJMC01000029.1 Protein Homology CDS 71279 73012 . + 0 ID=cds-WP_032170767.1;Parent=gene-AB25_RS15145;Dbxref=GenBank:WP_032170767.1;Name=WP_032170767.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025321.1;locus_tag=AB25_RS15145;product=arginine--tRNA ligase;protein_id=WP_032170767.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 73054 73098 . - . ID=gene-AB25_RS32260;Name=yecV;gbkey=Gene;gene=yecV;gene_biotype=protein_coding;locus_tag=AB25_RS32260 NZ_JJMC01000029.1 Protein Homology CDS 73054 73098 . - 0 ID=cds-WP_211180499.1;Parent=gene-AB25_RS32260;Dbxref=GenBank:WP_211180499.1;Name=WP_211180499.1;gbkey=CDS;gene=yecV;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051188.1;locus_tag=AB25_RS32260;product=protein YecV;protein_id=WP_211180499.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 73189 73677 . + . ID=gene-AB25_RS15140;Name=yecT;gbkey=Gene;gene=yecT;gene_biotype=protein_coding;locus_tag=AB25_RS15140;old_locus_tag=AB25_2037 NZ_JJMC01000029.1 Protein Homology CDS 73189 73677 . + 0 ID=cds-WP_001297434.1;Parent=gene-AB25_RS15140;Dbxref=GenBank:WP_001297434.1;Name=WP_001297434.1;gbkey=CDS;gene=yecT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416391.4;locus_tag=AB25_RS15140;product=lysozyme inhibitor LprI family protein;protein_id=WP_001297434.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 73797 74189 . - . ID=gene-AB25_RS0125315;Name=flhE;gbkey=Gene;gene=flhE;gene_biotype=protein_coding;locus_tag=AB25_RS0125315 NZ_JJMC01000029.1 Protein Homology CDS 73797 74189 . - 0 ID=cds-WP_001259583.1;Parent=gene-AB25_RS0125315;Dbxref=GenBank:WP_001259583.1;Name=WP_001259583.1;Ontology_term=GO:0044781;gbkey=CDS;gene=flhE;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416392.1;locus_tag=AB25_RS0125315;product=flagellar protein FlhE;protein_id=WP_001259583.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 74189 76267 . - . ID=gene-AB25_RS15135;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=AB25_RS15135;old_locus_tag=AB25_2039 NZ_JJMC01000029.1 Protein Homology CDS 74189 76267 . - 0 ID=cds-WP_000066983.1;Parent=gene-AB25_RS15135;Dbxref=GenBank:WP_000066983.1;Name=WP_000066983.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=flhA;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416393.1;locus_tag=AB25_RS15135;product=flagellar biosynthesis protein FlhA;protein_id=WP_000066983.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 76260 77408 . - . ID=gene-AB25_RS15130;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=AB25_RS15130;old_locus_tag=AB25_2040 NZ_JJMC01000029.1 Protein Homology CDS 76260 77408 . - 0 ID=cds-WP_001278954.1;Parent=gene-AB25_RS15130;Dbxref=GenBank:WP_001278954.1;Name=WP_001278954.1;Ontology_term=GO:0015031,GO:0044780,GO:0016020;gbkey=CDS;gene=flhB;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416394.1;locus_tag=AB25_RS15130;product=flagellar biosynthesis protein FlhB;protein_id=WP_001278954.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 77610 78254 . - . ID=gene-AB25_RS15125;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=protein_coding;locus_tag=AB25_RS15125;old_locus_tag=AB25_2042 NZ_JJMC01000029.1 Protein Homology CDS 77610 78254 . - 0 ID=cds-WP_000983609.1;Parent=gene-AB25_RS15125;Dbxref=GenBank:WP_000983609.1;Name=WP_000983609.1;Ontology_term=GO:0050920,GO:0003824;gbkey=CDS;gene=cheZ;go_function=catalytic activity|0003824||IEA;go_process=regulation of chemotaxis|0050920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416395.1;locus_tag=AB25_RS15125;product=protein phosphatase CheZ;protein_id=WP_000983609.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 78265 78654 . - . ID=gene-AB25_RS15120;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=AB25_RS15120;old_locus_tag=AB25_2043 NZ_JJMC01000029.1 Protein Homology CDS 78265 78654 . - 0 ID=cds-WP_000763867.1;Parent=gene-AB25_RS15120;Dbxref=GenBank:WP_000763867.1;Name=WP_000763867.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210873.1;locus_tag=AB25_RS15120;product=chemotaxis response regulator CheY;protein_id=WP_000763867.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 78669 79718 . - . ID=gene-AB25_RS15115;Name=cheB;gbkey=Gene;gene=cheB;gene_biotype=protein_coding;locus_tag=AB25_RS15115;old_locus_tag=AB25_2044 NZ_JJMC01000029.1 Protein Homology CDS 78669 79718 . - 0 ID=cds-WP_000036371.1;Parent=gene-AB25_RS15115;Dbxref=GenBank:WP_000036371.1;Name=WP_000036371.1;gbkey=CDS;gene=cheB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036372.1;locus_tag=AB25_RS15115;product=protein-glutamate methylesterase/protein glutamine deamidase;protein_id=WP_000036371.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 79721 80581 . - . ID=gene-AB25_RS15110;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;locus_tag=AB25_RS15110;old_locus_tag=AB25_2045 NZ_JJMC01000029.1 Protein Homology CDS 79721 80581 . - 0 ID=cds-WP_000204335.1;Parent=gene-AB25_RS15110;Dbxref=GenBank:WP_000204335.1;Name=WP_000204335.1;Ontology_term=GO:0008757;gbkey=CDS;gene=cheR;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416398.1;locus_tag=AB25_RS15110;product=protein-glutamate O-methyltransferase CheR;protein_id=WP_000204335.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 80600 82201 . - . ID=gene-AB25_RS15105;Name=tap;gbkey=Gene;gene=tap;gene_biotype=protein_coding;locus_tag=AB25_RS15105;old_locus_tag=AB25_2046 NZ_JJMC01000029.1 Protein Homology CDS 80600 82201 . - 0 ID=cds-WP_001402286.1;Parent=gene-AB25_RS15105;Dbxref=GenBank:WP_001402286.1;Name=WP_001402286.1;gbkey=CDS;gene=tap;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416399.1;locus_tag=AB25_RS15105;product=methyl-accepting chemotaxis protein IV;protein_id=WP_001402286.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 82247 83908 . - . ID=gene-AB25_RS15100;Name=tar;gbkey=Gene;gene=tar;gene_biotype=protein_coding;locus_tag=AB25_RS15100;old_locus_tag=AB25_2047 NZ_JJMC01000029.1 Protein Homology CDS 82247 83908 . - 0 ID=cds-WP_001297437.1;Parent=gene-AB25_RS15100;Dbxref=GenBank:WP_001297437.1;Name=WP_001297437.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tar;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416400.1;locus_tag=AB25_RS15100;product=methyl-accepting chemotaxis protein II;protein_id=WP_001297437.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 84053 84556 . - . ID=gene-AB25_RS15095;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=AB25_RS15095;old_locus_tag=AB25_2048 NZ_JJMC01000029.1 Protein Homology CDS 84053 84556 . - 0 ID=cds-WP_000147302.1;Parent=gene-AB25_RS15095;Dbxref=GenBank:WP_000147302.1;Name=WP_000147302.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310624.1;locus_tag=AB25_RS15095;product=chemotaxis protein CheW;protein_id=WP_000147302.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 84577 86541 . - . ID=gene-AB25_RS15090;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=AB25_RS15090;old_locus_tag=AB25_2049 NZ_JJMC01000029.1 Protein Homology CDS 84577 86541 . - 0 ID=cds-WP_001300654.1;Parent=gene-AB25_RS15090;Dbxref=GenBank:WP_001300654.1;Name=WP_001300654.1;Ontology_term=GO:0000160,GO:0006935,GO:0016310,GO:0000155;gbkey=CDS;gene=cheA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010283911.1;locus_tag=AB25_RS15090;product=chemotaxis protein CheA;protein_id=WP_001300654.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 86546 87472 . - . ID=gene-AB25_RS15085;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=AB25_RS15085;old_locus_tag=AB25_2050 NZ_JJMC01000029.1 Protein Homology CDS 86546 87472 . - 0 ID=cds-WP_000795630.1;Parent=gene-AB25_RS15085;Dbxref=GenBank:WP_000795630.1;Name=WP_000795630.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310626.1;locus_tag=AB25_RS15085;product=flagellar motor protein MotB;protein_id=WP_000795630.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 87469 88356 . - . ID=gene-AB25_RS15080;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=AB25_RS15080;old_locus_tag=AB25_2051 NZ_JJMC01000029.1 Protein Homology CDS 87469 88356 . - 0 ID=cds-WP_000906340.1;Parent=gene-AB25_RS15080;Dbxref=GenBank:WP_000906340.1;Name=WP_000906340.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416404.1;locus_tag=AB25_RS15080;product=flagellar motor stator protein MotA;protein_id=WP_000906340.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 88483 89061 . - . ID=gene-AB25_RS15075;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=AB25_RS15075;old_locus_tag=AB25_2052 NZ_JJMC01000029.1 Protein Homology CDS 88483 89061 . - 0 ID=cds-WP_001291603.1;Parent=gene-AB25_RS15075;Dbxref=GenBank:WP_001291603.1;Name=WP_001291603.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhC;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310628.1;locus_tag=AB25_RS15075;product=flagellar transcriptional regulator FlhC;protein_id=WP_001291603.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 89064 89414 . - . ID=gene-AB25_RS15070;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=AB25_RS15070;old_locus_tag=AB25_2053 NZ_JJMC01000029.1 Protein Homology CDS 89064 89414 . - 0 ID=cds-WP_001295647.1;Parent=gene-AB25_RS15070;Dbxref=GenBank:WP_001295647.1;Name=WP_001295647.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhD;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416406.4;locus_tag=AB25_RS15070;product=flagellar transcriptional regulator FlhD;protein_id=WP_001295647.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 90193 90621 . + . ID=gene-AB25_RS15065;Name=uspC;gbkey=Gene;gene=uspC;gene_biotype=protein_coding;locus_tag=AB25_RS15065;old_locus_tag=AB25_2055 NZ_JJMC01000029.1 Protein Homology CDS 90193 90621 . + 0 ID=cds-WP_000122437.1;Parent=gene-AB25_RS15065;Dbxref=GenBank:WP_000122437.1;Name=WP_000122437.1;gbkey=CDS;gene=uspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416409.1;locus_tag=AB25_RS15065;product=universal stress protein UspC;protein_id=WP_000122437.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 90628 92052 . - . ID=gene-AB25_RS15060;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=AB25_RS15060;old_locus_tag=AB25_2056 NZ_JJMC01000029.1 Protein Homology CDS 90628 92052 . - 0 ID=cds-WP_001295646.1;Parent=gene-AB25_RS15060;Dbxref=GenBank:WP_001295646.1;Name=WP_001295646.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416410.1;locus_tag=AB25_RS15060;product=alpha%2Calpha-trehalose-phosphate synthase;protein_id=WP_001295646.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 92027 92827 . - . ID=gene-AB25_RS15055;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=AB25_RS15055;old_locus_tag=AB25_2057 NZ_JJMC01000029.1 Protein Homology CDS 92027 92827 . - 0 ID=cds-WP_001299673.1;Parent=gene-AB25_RS15055;Dbxref=GenBank:WP_001299673.1;Name=WP_001299673.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310632.1;locus_tag=AB25_RS15055;product=trehalose-phosphatase;protein_id=WP_001299673.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 92994 93980 . - . ID=gene-AB25_RS15050;Name=araH;gbkey=Gene;gene=araH;gene_biotype=protein_coding;locus_tag=AB25_RS15050;old_locus_tag=AB25_2058 NZ_JJMC01000029.1 Protein Homology CDS 92994 93980 . - 0 ID=cds-WP_032170771.1;Parent=gene-AB25_RS15050;Dbxref=GenBank:WP_032170771.1;Name=WP_032170771.1;gbkey=CDS;gene=araH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026162.2;locus_tag=AB25_RS15050;product=arabinose ABC transporter permease AraH;protein_id=WP_032170771.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 93995 95509 . - . ID=gene-AB25_RS15045;Name=araG;gbkey=Gene;gene=araG;gene_biotype=protein_coding;locus_tag=AB25_RS15045;old_locus_tag=AB25_2059 NZ_JJMC01000029.1 Protein Homology CDS 93995 95509 . - 0 ID=cds-WP_001187819.1;Parent=gene-AB25_RS15045;Dbxref=GenBank:WP_001187819.1;Name=WP_001187819.1;gbkey=CDS;gene=araG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127704.1;locus_tag=AB25_RS15045;product=arabinose ABC transporter ATP-binding protein AraG;protein_id=WP_001187819.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 95579 96568 . - . ID=gene-AB25_RS15040;Name=araF;gbkey=Gene;gene=araF;gene_biotype=protein_coding;locus_tag=AB25_RS15040;old_locus_tag=AB25_2060 NZ_JJMC01000029.1 Protein Homology CDS 95579 96568 . - 0 ID=cds-WP_000548675.1;Parent=gene-AB25_RS15040;Dbxref=GenBank:WP_000548675.1;Name=WP_000548675.1;gbkey=CDS;gene=araF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416414.1;locus_tag=AB25_RS15040;product=arabinose ABC transporter substrate-binding protein AraF;protein_id=WP_000548675.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 97365 97868 . + . ID=gene-AB25_RS15035;Name=ftnB;gbkey=Gene;gene=ftnB;gene_biotype=protein_coding;locus_tag=AB25_RS15035;old_locus_tag=AB25_2061 NZ_JJMC01000029.1 Protein Homology CDS 97365 97868 . + 0 ID=cds-WP_000179469.1;Parent=gene-AB25_RS15035;Dbxref=GenBank:WP_000179469.1;Name=WP_000179469.1;gbkey=CDS;gene=ftnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310637.1;locus_tag=AB25_RS15035;product=non-heme ferritin-like protein;protein_id=WP_000179469.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 97947 98198 . - . ID=gene-AB25_RS15030;Name=yecJ;gbkey=Gene;gene=yecJ;gene_biotype=protein_coding;locus_tag=AB25_RS15030;old_locus_tag=AB25_2062 NZ_JJMC01000029.1 Protein Homology CDS 97947 98198 . - 0 ID=cds-WP_000082127.1;Parent=gene-AB25_RS15030;Dbxref=GenBank:WP_000082127.1;Name=WP_000082127.1;gbkey=CDS;gene=yecJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416416.2;locus_tag=AB25_RS15030;product=DUF2766 family protein YecJ;protein_id=WP_000082127.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 98313 98399 . - . ID=gene-AB25_RS30300;Name=azuC;gbkey=Gene;gene=azuC;gene_biotype=protein_coding;locus_tag=AB25_RS30300 NZ_JJMC01000029.1 Protein Homology CDS 98313 98399 . - 0 ID=cds-WP_010723106.1;Parent=gene-AB25_RS30300;Dbxref=GenBank:WP_010723106.1;Name=WP_010723106.1;gbkey=CDS;gene=azuC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791245.1;locus_tag=AB25_RS30300;product=stress response protein AzuC;protein_id=WP_010723106.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 98662 98985 . + . ID=gene-AB25_RS0125320;Name=yecR;gbkey=Gene;gene=yecR;gene_biotype=protein_coding;locus_tag=AB25_RS0125320;old_locus_tag=AB25_2064 NZ_JJMC01000029.1 Protein Homology CDS 98662 98985 . + 0 ID=cds-WP_001237875.1;Parent=gene-AB25_RS0125320;Dbxref=GenBank:WP_001237875.1;Name=WP_001237875.1;gbkey=CDS;gene=yecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707794.1;locus_tag=AB25_RS0125320;product=YecR-like lipofamily protein;protein_id=WP_001237875.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 99157 99654 . + . ID=gene-AB25_RS15020;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=AB25_RS15020;old_locus_tag=AB25_2066 NZ_JJMC01000029.1 Protein Homology CDS 99157 99654 . + 0 ID=cds-WP_000917208.1;Parent=gene-AB25_RS15020;Dbxref=GenBank:WP_000917208.1;Name=WP_000917208.1;Ontology_term=GO:0006879,GO:0008199;gbkey=CDS;gene=ftnA;go_function=ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310640.1;locus_tag=AB25_RS15020;product=non-heme ferritin;protein_id=WP_000917208.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 99692 99931 . - . ID=gene-AB25_RS15015;Name=yecH;gbkey=Gene;gene=yecH;gene_biotype=protein_coding;locus_tag=AB25_RS15015;old_locus_tag=AB25_2067 NZ_JJMC01000029.1 Protein Homology CDS 99692 99931 . - 0 ID=cds-WP_000377224.1;Parent=gene-AB25_RS15015;Dbxref=GenBank:WP_000377224.1;Name=WP_000377224.1;gbkey=CDS;gene=yecH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310641.1;locus_tag=AB25_RS15015;product=YecH family metal-binding protein;protein_id=WP_000377224.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 100121 101332 . + . ID=gene-AB25_RS15010;Name=tyrP;gbkey=Gene;gene=tyrP;gene_biotype=protein_coding;locus_tag=AB25_RS15010;old_locus_tag=AB25_2069 NZ_JJMC01000029.1 Protein Homology CDS 100121 101332 . + 0 ID=cds-WP_000797573.1;Parent=gene-AB25_RS15010;Dbxref=GenBank:WP_000797573.1;Name=WP_000797573.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=tyrP;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310642.1;locus_tag=AB25_RS15010;product=tyrosine transporter TyrP;protein_id=WP_000797573.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 101394 102059 . - . ID=gene-AB25_RS15005;Name=yecA;gbkey=Gene;gene=yecA;gene_biotype=protein_coding;locus_tag=AB25_RS15005;old_locus_tag=AB25_2070 NZ_JJMC01000029.1 Protein Homology CDS 101394 102059 . - 0 ID=cds-WP_000847902.1;Parent=gene-AB25_RS15005;Dbxref=GenBank:WP_000847902.1;Name=WP_000847902.1;gbkey=CDS;gene=yecA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416421.1;locus_tag=AB25_RS15005;product=UPF0149 family protein YecA;protein_id=WP_000847902.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 102255 102341 . - . ID=gene-AB25_RS15000;Name=AB25_RS15000;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS15000;old_locus_tag=AB25_2071 NZ_JJMC01000029.1 tRNAscan-SE tRNA 102255 102341 . - . ID=rna-AB25_RS15000;Parent=gene-AB25_RS15000;anticodon=(pos:complement(102305..102307));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS15000;product=tRNA-Leu NZ_JJMC01000029.1 tRNAscan-SE exon 102255 102341 . - . ID=exon-AB25_RS15000-1;Parent=rna-AB25_RS15000;anticodon=(pos:complement(102305..102307));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS15000;product=tRNA-Leu NZ_JJMC01000029.1 RefSeq gene 102354 102427 . - . ID=gene-AB25_RS14995;Name=AB25_RS14995;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS14995;old_locus_tag=AB25_2072 NZ_JJMC01000029.1 tRNAscan-SE tRNA 102354 102427 . - . ID=rna-AB25_RS14995;Parent=gene-AB25_RS14995;anticodon=(pos:complement(102393..102395));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS14995;product=tRNA-Cys NZ_JJMC01000029.1 tRNAscan-SE exon 102354 102427 . - . ID=exon-AB25_RS14995-1;Parent=rna-AB25_RS14995;anticodon=(pos:complement(102393..102395));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS14995;product=tRNA-Cys NZ_JJMC01000029.1 RefSeq gene 102481 102556 . - . ID=gene-AB25_RS14990;Name=AB25_RS14990;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS14990;old_locus_tag=AB25_2073 NZ_JJMC01000029.1 tRNAscan-SE tRNA 102481 102556 . - . ID=rna-AB25_RS14990;Parent=gene-AB25_RS14990;anticodon=(pos:complement(102521..102523));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS14990;product=tRNA-Gly NZ_JJMC01000029.1 tRNAscan-SE exon 102481 102556 . - . ID=exon-AB25_RS14990-1;Parent=rna-AB25_RS14990;anticodon=(pos:complement(102521..102523));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS14990;product=tRNA-Gly NZ_JJMC01000029.1 RefSeq gene 102708 103256 . - . ID=gene-AB25_RS14985;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=AB25_RS14985;old_locus_tag=AB25_2074 NZ_JJMC01000029.1 Protein Homology CDS 102708 103256 . - 0 ID=cds-WP_001160187.1;Parent=gene-AB25_RS14985;Dbxref=GenBank:WP_001160187.1;Name=WP_001160187.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310677.1;locus_tag=AB25_RS14985;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_001160187.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 103313 105145 . - . ID=gene-AB25_RS14980;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=AB25_RS14980;old_locus_tag=AB25_2075 NZ_JJMC01000029.1 Protein Homology CDS 103313 105145 . - 0 ID=cds-WP_001283424.1;Parent=gene-AB25_RS14980;Dbxref=GenBank:WP_001283424.1;Name=WP_001283424.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310678.2;locus_tag=AB25_RS14980;product=excinuclease ABC subunit UvrC;protein_id=WP_001283424.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 105142 105798 . - . ID=gene-AB25_RS14975;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;locus_tag=AB25_RS14975;old_locus_tag=AB25_2076 NZ_JJMC01000029.1 Protein Homology CDS 105142 105798 . - 0 ID=cds-WP_000611328.1;Parent=gene-AB25_RS14975;Dbxref=GenBank:WP_000611328.1;Name=WP_000611328.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=uvrY;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310679.1;locus_tag=AB25_RS14975;product=UvrY/SirA/GacA family response regulator transcription factor;protein_id=WP_000611328.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 105940 106056 . + . ID=gene-AB25_RS32815;Name=AB25_RS32815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32815;old_locus_tag=AB25_2077 NZ_JJMC01000029.1 Protein Homology CDS 105940 106056 . + 0 ID=cds-WP_001302039.1;Parent=gene-AB25_RS32815;Dbxref=GenBank:WP_001302039.1;Name=WP_001302039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001302039.1;locus_tag=AB25_RS32815;product=hypothetical protein;protein_id=WP_001302039.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 106094 106270 . + . ID=gene-AB25_RS31705;Name=yecU;gbkey=Gene;gene=yecU;gene_biotype=protein_coding;locus_tag=AB25_RS31705 NZ_JJMC01000029.1 Protein Homology CDS 106094 106270 . + 0 ID=cds-WP_000590344.1;Parent=gene-AB25_RS31705;Dbxref=GenBank:WP_000590344.1;Name=WP_000590344.1;gbkey=CDS;gene=yecU;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518796.1;locus_tag=AB25_RS31705;product=protein YecU;protein_id=WP_000590344.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 106257 106481 . + . ID=gene-AB25_RS14970;Name=yecF;gbkey=Gene;gene=yecF;gene_biotype=protein_coding;locus_tag=AB25_RS14970;old_locus_tag=AB25_2078 NZ_JJMC01000029.1 Protein Homology CDS 106257 106481 . + 0 ID=cds-WP_000106474.1;Parent=gene-AB25_RS14970;Dbxref=GenBank:WP_000106474.1;Name=WP_000106474.1;gbkey=CDS;gene=yecF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416425.1;locus_tag=AB25_RS14970;product=DUF2594 family protein YecF;protein_id=WP_000106474.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 106549 107271 . - . ID=gene-AB25_RS14965;Name=sdiA;gbkey=Gene;gene=sdiA;gene_biotype=protein_coding;locus_tag=AB25_RS14965;old_locus_tag=AB25_2079 NZ_JJMC01000029.1 Protein Homology CDS 106549 107271 . - 0 ID=cds-WP_001152713.1;Parent=gene-AB25_RS14965;Dbxref=GenBank:WP_001152713.1;Name=WP_001152713.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=sdiA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416426.1;locus_tag=AB25_RS14965;product=transcriptional regulator SdiA;protein_id=WP_001152713.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 107501 108253 . - . ID=gene-AB25_RS14960;Name=tcyN;gbkey=Gene;gene=tcyN;gene_biotype=protein_coding;locus_tag=AB25_RS14960;old_locus_tag=AB25_2080 NZ_JJMC01000029.1 Protein Homology CDS 107501 108253 . - 0 ID=cds-WP_001272991.1;Parent=gene-AB25_RS14960;Dbxref=GenBank:WP_001272991.1;Name=WP_001272991.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=tcyN;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416427.1;locus_tag=AB25_RS14960;product=L-cystine ABC transporter ATP-binding protein TcyN;protein_id=WP_001272991.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 108250 108918 . - . ID=gene-AB25_RS14955;Name=tcyL;gbkey=Gene;gene=tcyL;gene_biotype=protein_coding;locus_tag=AB25_RS14955;old_locus_tag=AB25_2081 NZ_JJMC01000029.1 Protein Homology CDS 108250 108918 . - 0 ID=cds-WP_001158220.1;Parent=gene-AB25_RS14955;Dbxref=GenBank:WP_001158220.1;Name=WP_001158220.1;gbkey=CDS;gene=tcyL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416428.1;locus_tag=AB25_RS14955;product=cystine ABC transporter permease;protein_id=WP_001158220.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 108933 109919 . - . ID=gene-AB25_RS14950;Name=dcyD;gbkey=Gene;gene=dcyD;gene_biotype=protein_coding;locus_tag=AB25_RS14950;old_locus_tag=AB25_2082 NZ_JJMC01000029.1 Protein Homology CDS 108933 109919 . - 0 ID=cds-WP_001128215.1;Parent=gene-AB25_RS14950;Dbxref=GenBank:WP_001128215.1;Name=WP_001128215.1;Ontology_term=GO:0019148;gbkey=CDS;gene=dcyD;go_function=D-cysteine desulfhydrase activity|0019148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416429.4;locus_tag=AB25_RS14950;product=D-cysteine desulfhydrase;protein_id=WP_001128215.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 110024 110824 . - . ID=gene-AB25_RS14945;Name=tcyJ;gbkey=Gene;gene=tcyJ;gene_biotype=protein_coding;locus_tag=AB25_RS14945;old_locus_tag=AB25_2083 NZ_JJMC01000029.1 Protein Homology CDS 110024 110824 . - 0 ID=cds-WP_001358499.1;Parent=gene-AB25_RS14945;Dbxref=GenBank:WP_001358499.1;Name=WP_001358499.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=tcyJ;go_component=membrane|0016020||IEA;go_function=ligand-gated monoatomic ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416430.1;locus_tag=AB25_RS14945;product=cystine ABC transporter substrate-binding protein;protein_id=WP_001358499.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 110912 111463 . - . ID=gene-AB25_RS14940;Name=fliZ;gbkey=Gene;gene=fliZ;gene_biotype=protein_coding;locus_tag=AB25_RS14940;old_locus_tag=AB25_2084 NZ_JJMC01000029.1 Protein Homology CDS 110912 111463 . - 0 ID=cds-WP_001300606.1;Parent=gene-AB25_RS14940;Dbxref=GenBank:WP_001300606.1;Name=WP_001300606.1;gbkey=CDS;gene=fliZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310687.2;locus_tag=AB25_RS14940;product=flagella biosynthesis regulatory protein FliZ;protein_id=WP_001300606.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 111509 112228 . - . ID=gene-AB25_RS14935;Name=fliA;gbkey=Gene;gene=fliA;gene_biotype=protein_coding;locus_tag=AB25_RS14935;old_locus_tag=AB25_2085 NZ_JJMC01000029.1 Protein Homology CDS 111509 112228 . - 0 ID=cds-WP_001087463.1;Parent=gene-AB25_RS14935;Dbxref=GenBank:WP_001087463.1;Name=WP_001087463.1;gbkey=CDS;gene=fliA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310688.1;locus_tag=AB25_RS14935;product=RNA polymerase sigma factor FliA;protein_id=WP_001087463.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 112548 114335 . - . ID=gene-AB25_RS14930;Name=AB25_RS14930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS14930;old_locus_tag=AB25_2087 NZ_JJMC01000029.1 Protein Homology CDS 112548 114335 . - 0 ID=cds-WP_000079700.1;Parent=gene-AB25_RS14930;Dbxref=GenBank:WP_000079700.1;Name=WP_000079700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001723602.1;locus_tag=AB25_RS14930;product=FliC/FljB family flagellin;protein_id=WP_000079700.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 114601 116007 . + . ID=gene-AB25_RS14925;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=AB25_RS14925;old_locus_tag=AB25_2088 NZ_JJMC01000029.1 Protein Homology CDS 114601 116007 . + 0 ID=cds-WP_032170776.1;Parent=gene-AB25_RS14925;Dbxref=GenBank:WP_032170776.1;Name=WP_032170776.1;Ontology_term=GO:0007155,GO:0009288,GO:0009421;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA,bacterial-type flagellum filament cap|0009421||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416434.1;locus_tag=AB25_RS14925;product=flagellar filament capping protein FliD;protein_id=WP_032170776.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 116032 116442 . + . ID=gene-AB25_RS14920;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=AB25_RS14920;old_locus_tag=AB25_2089 NZ_JJMC01000029.1 Protein Homology CDS 116032 116442 . + 0 ID=cds-WP_000270663.1;Parent=gene-AB25_RS14920;Dbxref=GenBank:WP_000270663.1;Name=WP_000270663.1;Ontology_term=GO:0044780;gbkey=CDS;gene=fliS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310691.1;locus_tag=AB25_RS14920;product=flagellar export chaperone FliS;protein_id=WP_000270663.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 116442 116807 . + . ID=gene-AB25_RS14915;Name=fliT;gbkey=Gene;gene=fliT;gene_biotype=protein_coding;locus_tag=AB25_RS14915;old_locus_tag=AB25_2090 NZ_JJMC01000029.1 Protein Homology CDS 116442 116807 . + 0 ID=cds-WP_001015023.1;Parent=gene-AB25_RS14915;Dbxref=GenBank:WP_001015023.1;Name=WP_001015023.1;Ontology_term=GO:0006605,GO:0044780,GO:1902209;gbkey=CDS;gene=fliT;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA,negative regulation of bacterial-type flagellum assembly|1902209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310692.1;locus_tag=AB25_RS14915;product=flagella biosynthesis regulatory protein FliT;protein_id=WP_001015023.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 116885 118372 . + . ID=gene-AB25_RS14910;Name=amyA;gbkey=Gene;gene=amyA;gene_biotype=protein_coding;locus_tag=AB25_RS14910;old_locus_tag=AB25_2091 NZ_JJMC01000029.1 Protein Homology CDS 116885 118372 . + 0 ID=cds-WP_032170777.1;Parent=gene-AB25_RS14910;Dbxref=GenBank:WP_032170777.1;Name=WP_032170777.1;Ontology_term=GO:0005975,GO:0004553,GO:0005509;gbkey=CDS;gene=amyA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,calcium ion binding|0005509||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310693.1;locus_tag=AB25_RS14910;product=alpha-amylase;protein_id=WP_032170777.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 118406 118819 . - . ID=gene-AB25_RS14905;Name=yedD;gbkey=Gene;gene=yedD;gene_biotype=protein_coding;locus_tag=AB25_RS14905;old_locus_tag=AB25_2092 NZ_JJMC01000029.1 Protein Homology CDS 118406 118819 . - 0 ID=cds-WP_001295642.1;Parent=gene-AB25_RS14905;Dbxref=GenBank:WP_001295642.1;Name=WP_001295642.1;gbkey=CDS;gene=yedD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310694.3;locus_tag=AB25_RS14905;product=lipoprotein YedD;protein_id=WP_001295642.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 119006 120211 . + . ID=gene-AB25_RS14900;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=AB25_RS14900;old_locus_tag=AB25_2093 NZ_JJMC01000029.1 Protein Homology CDS 119006 120211 . + 0 ID=cds-WP_000118885.1;Parent=gene-AB25_RS14900;Dbxref=GenBank:WP_000118885.1;Name=WP_000118885.1;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416439.1;locus_tag=AB25_RS14900;product=selenium metabolism membrane protein YedE/FdhT;protein_id=WP_000118885.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 120208 120441 . + . ID=gene-AB25_RS14895;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=AB25_RS14895;old_locus_tag=AB25_2094 NZ_JJMC01000029.1 Protein Homology CDS 120208 120441 . + 0 ID=cds-WP_000789493.1;Parent=gene-AB25_RS14895;Dbxref=GenBank:WP_000789493.1;Name=WP_000789493.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310696.1;locus_tag=AB25_RS14895;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=WP_000789493.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 120548 121219 . + . ID=gene-AB25_RS14890;Name=yedK;gbkey=Gene;gene=yedK;gene_biotype=protein_coding;locus_tag=AB25_RS14890;old_locus_tag=AB25_2095 NZ_JJMC01000029.1 Protein Homology CDS 120548 121219 . + 0 ID=cds-WP_000334599.1;Parent=gene-AB25_RS14890;Dbxref=GenBank:WP_000334599.1;Name=WP_000334599.1;gbkey=CDS;gene=yedK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245363.1;locus_tag=AB25_RS14890;product=SOS response-associated peptidase;protein_id=WP_000334599.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 121204 122367 . - . ID=gene-AB25_RS14885;Name=insQ;gbkey=Gene;gene=insQ;gene_biotype=protein_coding;locus_tag=AB25_RS14885;old_locus_tag=AB25_2096 NZ_JJMC01000029.1 Protein Homology CDS 121204 122367 . - 0 ID=cds-WP_071999009.1;Parent=gene-AB25_RS14885;Dbxref=GenBank:WP_071999009.1;Name=WP_071999009.1;Ontology_term=GO:0006310,GO:0032196,GO:0003677,GO:0004519,GO:0046872;gbkey=CDS;gene=insQ;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415949.3;locus_tag=AB25_RS14885;product=RNA-guided endonuclease InsQ/TnpB family protein;protein_id=WP_071999009.1;transl_table=11 NZ_JJMC01000029.1 RefSeq pseudogene 122390 122800 . + . ID=gene-AB25_RS14880;Name=tnpA;end_range=122800,.;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=AB25_RS14880;old_locus_tag=AB25_2097;partial=true;pseudo=true NZ_JJMC01000029.1 Protein Homology CDS 122390 122800 . + 0 ID=cds-AB25_RS14880;Parent=gene-AB25_RS14880;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=122800,.;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001278583.1;locus_tag=AB25_RS14880;partial=true;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 122899 123567 . - . ID=gene-AB25_RS14875;Name=ydcL;gbkey=Gene;gene=ydcL;gene_biotype=protein_coding;locus_tag=AB25_RS14875;old_locus_tag=AB25_2098 NZ_JJMC01000029.1 Protein Homology CDS 122899 123567 . - 0 ID=cds-WP_001261013.1;Parent=gene-AB25_RS14875;Dbxref=GenBank:WP_001261013.1;Name=WP_001261013.1;gbkey=CDS;gene=ydcL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310063.1;locus_tag=AB25_RS14875;product=DUF3313 domain-containing protein;protein_id=WP_001261013.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 123870 124463 . - . ID=gene-AB25_RS14870;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=AB25_RS14870;old_locus_tag=AB25_2100 NZ_JJMC01000029.1 Protein Homology CDS 123870 124463 . - 0 ID=cds-WP_000586733.1;Parent=gene-AB25_RS14870;Dbxref=GenBank:WP_000586733.1;Name=WP_000586733.1;Ontology_term=GO:0046690,GO:0008757;gbkey=CDS;gene=tehB;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415947.1;locus_tag=AB25_RS14870;product=tellurite resistance methyltransferase TehB;protein_id=WP_000586733.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 124460 125452 . - . ID=gene-AB25_RS14865;Name=tehA;gbkey=Gene;gene=tehA;gene_biotype=protein_coding;locus_tag=AB25_RS14865;old_locus_tag=AB25_2101 NZ_JJMC01000029.1 Protein Homology CDS 124460 125452 . - 0 ID=cds-WP_024169409.1;Parent=gene-AB25_RS14865;Dbxref=GenBank:WP_024169409.1;Name=WP_024169409.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=tehA;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310061.1;locus_tag=AB25_RS14865;product=dicarboxylate transporter/tellurite-resistance protein TehA;protein_id=WP_024169409.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 125576 126556 . + . ID=gene-AB25_RS14860;Name=ydcK;gbkey=Gene;gene=ydcK;gene_biotype=protein_coding;locus_tag=AB25_RS14860;old_locus_tag=AB25_2102 NZ_JJMC01000029.1 Protein Homology CDS 125576 126556 . + 0 ID=cds-WP_001234058.1;Parent=gene-AB25_RS14860;Dbxref=GenBank:WP_001234058.1;Name=WP_001234058.1;gbkey=CDS;gene=ydcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707644.1;locus_tag=AB25_RS14860;product=YdcK family protein;protein_id=WP_001234058.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 126551 127087 . - . ID=gene-AB25_RS14855;Name=rimL;gbkey=Gene;gene=rimL;gene_biotype=protein_coding;locus_tag=AB25_RS14855;old_locus_tag=AB25_2103 NZ_JJMC01000029.1 Protein Homology CDS 126551 127087 . - 0 ID=cds-WP_000140884.1;Parent=gene-AB25_RS14855;Dbxref=GenBank:WP_000140884.1;Name=WP_000140884.1;gbkey=CDS;gene=rimL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707645.2;locus_tag=AB25_RS14855;product=50S ribosomal protein L7/L12-serine acetyltransferase;protein_id=WP_000140884.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 127150 127374 . - . ID=gene-AB25_RS14850;Name=ydcH;gbkey=Gene;gene=ydcH;gene_biotype=protein_coding;locus_tag=AB25_RS14850;old_locus_tag=AB25_2104 NZ_JJMC01000029.1 Protein Homology CDS 127150 127374 . - 0 ID=cds-WP_001296778.1;Parent=gene-AB25_RS14850;Dbxref=GenBank:WP_001296778.1;Name=WP_001296778.1;gbkey=CDS;gene=ydcH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415943.4;locus_tag=AB25_RS14850;product=YdcH family protein;protein_id=WP_001296778.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 127514 129169 . - . ID=gene-AB25_RS14845;Name=opgD;gbkey=Gene;gene=opgD;gene_biotype=protein_coding;gene_synonym=mdoD;locus_tag=AB25_RS14845;old_locus_tag=AB25_2105 NZ_JJMC01000029.1 Protein Homology CDS 127514 129169 . - 0 ID=cds-WP_000375956.1;Parent=gene-AB25_RS14845;Dbxref=GenBank:WP_000375956.1;Name=WP_000375956.1;gbkey=CDS;gene=opgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707648.1;locus_tag=AB25_RS14845;product=glucan biosynthesis protein OpgD;protein_id=WP_000375956.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 129394 130737 . - . ID=gene-AB25_RS14840;Name=hglS;gbkey=Gene;gene=hglS;gene_biotype=protein_coding;gene_synonym=ydcJ;locus_tag=AB25_RS14840;old_locus_tag=AB25_2106 NZ_JJMC01000029.1 Protein Homology CDS 129394 130737 . - 0 ID=cds-WP_000013786.1;Parent=gene-AB25_RS14840;Dbxref=GenBank:WP_000013786.1;Name=WP_000013786.1;Ontology_term=GO:0051213;gbkey=CDS;gene=hglS;go_function=dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415940.1;locus_tag=AB25_RS14840;product=2-oxoadipate dioxygenase/decarboxylase HglS;protein_id=WP_000013786.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 130954 131877 . + . ID=gene-AB25_RS14835;Name=ydcI;gbkey=Gene;gene=ydcI;gene_biotype=protein_coding;locus_tag=AB25_RS14835;old_locus_tag=AB25_2107 NZ_JJMC01000029.1 Protein Homology CDS 130954 131877 . + 0 ID=cds-WP_001356191.1;Parent=gene-AB25_RS14835;Dbxref=GenBank:WP_001356191.1;Name=WP_001356191.1;gbkey=CDS;gene=ydcI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310054.2;locus_tag=AB25_RS14835;product=LysR substrate-binding domain-containing protein;protein_id=WP_001356191.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 131915 133555 . - . ID=gene-AB25_RS14830;Name=trg;gbkey=Gene;gene=trg;gene_biotype=protein_coding;locus_tag=AB25_RS14830;old_locus_tag=AB25_2108 NZ_JJMC01000029.1 Protein Homology CDS 131915 133555 . - 0 ID=cds-WP_032170781.1;Parent=gene-AB25_RS14830;Dbxref=GenBank:WP_032170781.1;Name=WP_032170781.1;gbkey=CDS;gene=trg;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415938.1;locus_tag=AB25_RS14830;product=methyl-accepting chemotaxis protein Trg;protein_id=WP_032170781.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 133954 134103 . + . ID=gene-AB25_RS0125335;Name=hokB;gbkey=Gene;gene=hokB;gene_biotype=protein_coding;locus_tag=AB25_RS0125335 NZ_JJMC01000029.1 Protein Homology CDS 133954 134103 . + 0 ID=cds-WP_001320773.1;Parent=gene-AB25_RS0125335;Dbxref=GenBank:WP_001320773.1;Name=WP_001320773.1;gbkey=CDS;gene=hokB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025301.1;locus_tag=AB25_RS0125335;product=type I toxin-antitoxin system toxin HokB;protein_id=WP_001320773.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 134081 134149 . - . ID=gene-AB25_RS32265;Name=yncP;gbkey=Gene;gene=yncP;gene_biotype=protein_coding;locus_tag=AB25_RS32265 NZ_JJMC01000029.1 Protein Homology CDS 134081 134149 . - 0 ID=cds-WP_212591405.1;Parent=gene-AB25_RS32265;Dbxref=GenBank:WP_212591405.1;Name=WP_212591405.1;gbkey=CDS;gene=yncP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051184.1;locus_tag=AB25_RS32265;product=hypothetical protein;protein_id=WP_212591405.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 134175 134348 . - . ID=gene-AB25_RS14825;Name=AB25_RS14825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS14825;old_locus_tag=AB25_2109 NZ_JJMC01000029.1 Protein Homology CDS 134175 134348 . - 0 ID=cds-WP_000731833.1;Parent=gene-AB25_RS14825;Dbxref=GenBank:WP_000731833.1;Name=WP_000731833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415936.1;locus_tag=AB25_RS14825;product=periplasmic protein;protein_id=WP_000731833.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 134593 135123 . - . ID=gene-AB25_RS14820;Name=cybB;gbkey=Gene;gene=cybB;gene_biotype=protein_coding;locus_tag=AB25_RS14820;old_locus_tag=AB25_2110 NZ_JJMC01000029.1 Protein Homology CDS 134593 135123 . - 0 ID=cds-WP_001616972.1;Parent=gene-AB25_RS14820;Dbxref=GenBank:WP_001616972.1;Name=WP_001616972.1;Ontology_term=GO:0022904,GO:0009055,GO:0016020;gbkey=CDS;gene=cybB;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415935.2;locus_tag=AB25_RS14820;product=cytochrome b561;protein_id=WP_001616972.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 135312 136313 . + . ID=gene-AB25_RS14815;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=AB25_RS14815;old_locus_tag=AB25_2111 NZ_JJMC01000029.1 Protein Homology CDS 135312 136313 . + 0 ID=cds-WP_000048667.1;Parent=gene-AB25_RS14815;Dbxref=GenBank:WP_000048667.1;Name=WP_000048667.1;Ontology_term=GO:0006006,GO:0016620,GO:0050661,GO:0051287;gbkey=CDS;gene=gap;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310049.1;locus_tag=AB25_RS14815;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_000048667.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 136355 137794 . - . ID=gene-AB25_RS14810;Name=aldA;gbkey=Gene;gene=aldA;gene_biotype=protein_coding;locus_tag=AB25_RS14810;old_locus_tag=AB25_2112 NZ_JJMC01000029.1 Protein Homology CDS 136355 137794 . - 0 ID=cds-WP_000115957.1;Parent=gene-AB25_RS14810;Dbxref=GenBank:WP_000115957.1;Name=WP_000115957.1;Ontology_term=GO:0016620;gbkey=CDS;gene=aldA;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310048.1;locus_tag=AB25_RS14810;product=aldehyde dehydrogenase;protein_id=WP_000115957.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 137991 138791 . - . ID=gene-AB25_RS14805;Name=ydcF;gbkey=Gene;gene=ydcF;gene_biotype=protein_coding;locus_tag=AB25_RS14805;old_locus_tag=AB25_2113 NZ_JJMC01000029.1 Protein Homology CDS 137991 138791 . - 0 ID=cds-WP_001027931.1;Parent=gene-AB25_RS14805;Dbxref=GenBank:WP_001027931.1;Name=WP_001027931.1;gbkey=CDS;gene=ydcF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415932.1;locus_tag=AB25_RS14805;product=DUF218 domain-containing protein YdcF;protein_id=WP_001027931.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 139063 142965 . - . ID=gene-AB25_RS14800;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=AB25_RS14800;old_locus_tag=AB25_2114 NZ_JJMC01000029.1 Protein Homology CDS 139063 142965 . - 0 ID=cds-WP_000139567.1;Parent=gene-AB25_RS14800;Dbxref=GenBank:WP_000139567.1;Name=WP_000139567.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=hrpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415931.4;locus_tag=AB25_RS14800;product=ATP-dependent RNA helicase HrpA;protein_id=WP_000139567.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 143166 143771 . + . ID=gene-AB25_RS14795;Name=azoR;gbkey=Gene;gene=azoR;gene_biotype=protein_coding;locus_tag=AB25_RS14795;old_locus_tag=AB25_2115 NZ_JJMC01000029.1 Protein Homology CDS 143166 143771 . + 0 ID=cds-WP_000048953.1;Parent=gene-AB25_RS14795;Dbxref=GenBank:WP_000048953.1;Name=WP_000048953.1;gbkey=CDS;gene=azoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310041.1;locus_tag=AB25_RS14795;product=FMN-dependent NADH-azoreductase;protein_id=WP_000048953.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 143822 145138 . - . ID=gene-AB25_RS14790;Name=ynbD;gbkey=Gene;gene=ynbD;gene_biotype=protein_coding;locus_tag=AB25_RS14790;old_locus_tag=AB25_2116 NZ_JJMC01000029.1 Protein Homology CDS 143822 145138 . - 0 ID=cds-WP_000627379.1;Parent=gene-AB25_RS14790;Dbxref=GenBank:WP_000627379.1;Name=WP_000627379.1;gbkey=CDS;gene=ynbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310040.2;locus_tag=AB25_RS14790;product=phosphatase PAP2/dual specificity phosphatase family protein;protein_id=WP_000627379.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 145128 146885 . - . ID=gene-AB25_RS14785;Name=ynbC;gbkey=Gene;gene=ynbC;gene_biotype=protein_coding;locus_tag=AB25_RS14785;old_locus_tag=AB25_2117 NZ_JJMC01000029.1 Protein Homology CDS 145128 146885 . - 0 ID=cds-WP_000431817.1;Parent=gene-AB25_RS14785;Dbxref=GenBank:WP_000431817.1;Name=WP_000431817.1;Ontology_term=GO:0008168,GO:0016787,GO:1904047;gbkey=CDS;gene=ynbC;go_function=methyltransferase activity|0008168||IEA,hydrolase activity|0016787||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310039.1;locus_tag=AB25_RS14785;product=bifunctional alpha/beta hydrolase/class I SAM-dependent methyltransferase;protein_id=WP_000431817.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 146901 147797 . - . ID=gene-AB25_RS14780;Name=ynbB;gbkey=Gene;gene=ynbB;gene_biotype=protein_coding;locus_tag=AB25_RS14780;old_locus_tag=AB25_2118 NZ_JJMC01000029.1 Protein Homology CDS 146901 147797 . - 0 ID=cds-WP_000890909.1;Parent=gene-AB25_RS14780;Dbxref=GenBank:WP_000890909.1;Name=WP_000890909.1;Ontology_term=GO:0016024,GO:0004605;gbkey=CDS;gene=ynbB;go_function=phosphatidate cytidylyltransferase activity|0004605||IEA;go_process=CDP-diacylglycerol biosynthetic process|0016024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415927.1;locus_tag=AB25_RS14780;product=phosphatidate cytidylyltransferase;protein_id=WP_000890909.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 147797 148402 . - . ID=gene-AB25_RS14775;Name=ynbA;gbkey=Gene;gene=ynbA;gene_biotype=protein_coding;locus_tag=AB25_RS14775;old_locus_tag=AB25_2119 NZ_JJMC01000029.1 Protein Homology CDS 147797 148402 . - 0 ID=cds-WP_000177525.1;Parent=gene-AB25_RS14775;Dbxref=GenBank:WP_000177525.1;Name=WP_000177525.1;Ontology_term=GO:0008654,GO:0000287,GO:0016780,GO:0016020;gbkey=CDS;gene=ynbA;go_component=membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310037.2;locus_tag=AB25_RS14775;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_000177525.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 148573 150879 . - . ID=gene-AB25_RS14770;Name=ydbD;gbkey=Gene;gene=ydbD;gene_biotype=protein_coding;locus_tag=AB25_RS14770;old_locus_tag=AB25_2120 NZ_JJMC01000029.1 Protein Homology CDS 148573 150879 . - 0 ID=cds-WP_000477179.1;Parent=gene-AB25_RS14770;Dbxref=GenBank:WP_000477179.1;Name=WP_000477179.1;gbkey=CDS;gene=ydbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415925.2;locus_tag=AB25_RS14770;product=DUF2773 domain-containing bactofilin;protein_id=WP_000477179.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 150943 151803 . - . ID=gene-AB25_RS14765;Name=pdxI;gbkey=Gene;gene=pdxI;gene_biotype=protein_coding;locus_tag=AB25_RS14765;old_locus_tag=AB25_2121 NZ_JJMC01000029.1 Protein Homology CDS 150943 151803 . - 0 ID=cds-WP_000097794.1;Parent=gene-AB25_RS14765;Dbxref=GenBank:WP_000097794.1;Name=WP_000097794.1;gbkey=CDS;gene=pdxI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415924.1;locus_tag=AB25_RS14765;product=pyridoxine 4-dehydrogenase;protein_id=WP_000097794.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 152035 152625 . - . ID=gene-AB25_RS14760;Name=paaY;gbkey=Gene;gene=paaY;gene_biotype=protein_coding;locus_tag=AB25_RS14760;old_locus_tag=AB25_2122 NZ_JJMC01000029.1 Protein Homology CDS 152035 152625 . - 0 ID=cds-WP_001123457.1;Parent=gene-AB25_RS14760;Dbxref=GenBank:WP_001123457.1;Name=WP_001123457.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaY;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415918.1;locus_tag=AB25_RS14760;product=phenylacetic acid degradation protein PaaY;protein_id=WP_001123457.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 152607 153557 . - . ID=gene-AB25_RS14755;Name=paaX;gbkey=Gene;gene=paaX;gene_biotype=protein_coding;locus_tag=AB25_RS14755;old_locus_tag=AB25_2123 NZ_JJMC01000029.1 Protein Homology CDS 152607 153557 . - 0 ID=cds-WP_000039892.1;Parent=gene-AB25_RS14755;Dbxref=GenBank:WP_000039892.1;Name=WP_000039892.1;Ontology_term=GO:0006351;gbkey=CDS;gene=paaX;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415917.1;locus_tag=AB25_RS14755;product=phenylacetic acid degradation operon negative regulatory protein PaaX;protein_id=WP_000039892.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 153658 154971 . - . ID=gene-AB25_RS14750;Name=paaK;gbkey=Gene;gene=paaK;gene_biotype=protein_coding;locus_tag=AB25_RS14750;old_locus_tag=AB25_2124 NZ_JJMC01000029.1 Protein Homology CDS 153658 154971 . - 0 ID=cds-WP_001484558.1;Parent=gene-AB25_RS14750;Dbxref=GenBank:WP_001484558.1;Name=WP_001484558.1;Ontology_term=GO:0010124,GO:0047475;gbkey=CDS;gene=paaK;go_function=phenylacetate-CoA ligase activity|0047475||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415916.1;locus_tag=AB25_RS14750;product=phenylacetate--CoA ligase PaaK;protein_id=WP_001484558.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 154998 156203 . - . ID=gene-AB25_RS14745;Name=paaJ;gbkey=Gene;gene=paaJ;gene_biotype=protein_coding;gene_synonym=paaE,ydbW;locus_tag=AB25_RS14745;old_locus_tag=AB25_2125 NZ_JJMC01000029.1 Protein Homology CDS 154998 156203 . - 0 ID=cds-WP_001206190.1;Parent=gene-AB25_RS14745;Dbxref=GenBank:WP_001206190.1;Name=WP_001206190.1;gbkey=CDS;gene=paaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415915.1;locus_tag=AB25_RS14745;product=bifunctional 3-oxoadipyl-CoA/3-oxo-5%2C6-dehydrosuberyl-CoA thiolase;protein_id=WP_001206190.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 156203 156625 . - . ID=gene-AB25_RS14740;Name=paaI;gbkey=Gene;gene=paaI;gene_biotype=protein_coding;locus_tag=AB25_RS14740;old_locus_tag=AB25_2126 NZ_JJMC01000029.1 Protein Homology CDS 156203 156625 . - 0 ID=cds-WP_000018413.1;Parent=gene-AB25_RS14740;Dbxref=GenBank:WP_000018413.1;Name=WP_000018413.1;Ontology_term=GO:0010124,GO:0016790;gbkey=CDS;gene=paaI;go_function=thiolester hydrolase activity|0016790||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415914.1;locus_tag=AB25_RS14740;product=hydroxyphenylacetyl-CoA thioesterase PaaI;protein_id=WP_000018413.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 156615 158042 . - . ID=gene-AB25_RS14735;Name=paaH;gbkey=Gene;gene=paaH;gene_biotype=protein_coding;locus_tag=AB25_RS14735;old_locus_tag=AB25_2127 NZ_JJMC01000029.1 Protein Homology CDS 156615 158042 . - 0 ID=cds-WP_032170784.1;Parent=gene-AB25_RS14735;Dbxref=GenBank:WP_032170784.1;Name=WP_032170784.1;Ontology_term=GO:0010124,GO:0008691;gbkey=CDS;gene=paaH;go_function=3-hydroxybutyryl-CoA dehydrogenase activity|0008691||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415913.1;locus_tag=AB25_RS14735;product=3-hydroxyacyl-CoA dehydrogenase PaaH;protein_id=WP_032170784.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 158044 158832 . - . ID=gene-AB25_RS14730;Name=paaG;gbkey=Gene;gene=paaG;gene_biotype=protein_coding;locus_tag=AB25_RS14730;old_locus_tag=AB25_2128 NZ_JJMC01000029.1 Protein Homology CDS 158044 158832 . - 0 ID=cds-WP_000969777.1;Parent=gene-AB25_RS14730;Dbxref=GenBank:WP_000969777.1;Name=WP_000969777.1;Ontology_term=GO:0010124,GO:0016853;gbkey=CDS;gene=paaG;go_function=isomerase activity|0016853||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415912.1;locus_tag=AB25_RS14730;product=2-(1%2C2-epoxy-1%2C2-dihydrophenyl)acetyl-CoA isomerase PaaG;protein_id=WP_000969777.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 158832 159599 . - . ID=gene-AB25_RS14725;Name=paaF;gbkey=Gene;gene=paaF;gene_biotype=protein_coding;locus_tag=AB25_RS14725;old_locus_tag=AB25_2129 NZ_JJMC01000029.1 Protein Homology CDS 158832 159599 . - 0 ID=cds-WP_001292353.1;Parent=gene-AB25_RS14725;Dbxref=GenBank:WP_001292353.1;Name=WP_001292353.1;gbkey=CDS;gene=paaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415911.1;locus_tag=AB25_RS14725;product=2%2C3-dehydroadipyl-CoA hydratase PaaF;protein_id=WP_001292353.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 159596 160666 . - . ID=gene-AB25_RS14720;Name=paaE;gbkey=Gene;gene=paaE;gene_biotype=protein_coding;locus_tag=AB25_RS14720;old_locus_tag=AB25_2130 NZ_JJMC01000029.1 Protein Homology CDS 159596 160666 . - 0 ID=cds-WP_032170785.1;Parent=gene-AB25_RS14720;Dbxref=GenBank:WP_032170785.1;Name=WP_032170785.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaE;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415910.1;locus_tag=AB25_RS14720;product=1%2C2-phenylacetyl-CoA epoxidase subunit PaaE;protein_id=WP_032170785.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 160674 161171 . - . ID=gene-AB25_RS14715;Name=paaD;gbkey=Gene;gene=paaD;gene_biotype=protein_coding;locus_tag=AB25_RS14715;old_locus_tag=AB25_2131 NZ_JJMC01000029.1 Protein Homology CDS 160674 161171 . - 0 ID=cds-WP_001189194.1;Parent=gene-AB25_RS14715;Dbxref=GenBank:WP_001189194.1;Name=WP_001189194.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaD;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415909.4;locus_tag=AB25_RS14715;product=1%2C2-phenylacetyl-CoA epoxidase subunit PaaD;protein_id=WP_001189194.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 161186 161932 . - . ID=gene-AB25_RS14710;Name=paaC;gbkey=Gene;gene=paaC;gene_biotype=protein_coding;locus_tag=AB25_RS14710;old_locus_tag=AB25_2132 NZ_JJMC01000029.1 Protein Homology CDS 161186 161932 . - 0 ID=cds-WP_001072837.1;Parent=gene-AB25_RS14710;Dbxref=GenBank:WP_001072837.1;Name=WP_001072837.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaC;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415908.1;locus_tag=AB25_RS14710;product=1%2C2-phenylacetyl-CoA epoxidase subunit PaaC;protein_id=WP_001072837.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 161941 162228 . - . ID=gene-AB25_RS14705;Name=paaB;gbkey=Gene;gene=paaB;gene_biotype=protein_coding;locus_tag=AB25_RS14705;old_locus_tag=AB25_2133 NZ_JJMC01000029.1 Protein Homology CDS 161941 162228 . - 0 ID=cds-WP_000073393.1;Parent=gene-AB25_RS14705;Dbxref=GenBank:WP_000073393.1;Name=WP_000073393.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaB;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415907.1;locus_tag=AB25_RS14705;product=1%2C2-phenylacetyl-CoA epoxidase subunit PaaB;protein_id=WP_000073393.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 162240 163169 . - . ID=gene-AB25_RS14700;Name=paaA;gbkey=Gene;gene=paaA;gene_biotype=protein_coding;locus_tag=AB25_RS14700;old_locus_tag=AB25_2134 NZ_JJMC01000029.1 Protein Homology CDS 162240 163169 . - 0 ID=cds-WP_000191073.1;Parent=gene-AB25_RS14700;Dbxref=GenBank:WP_000191073.1;Name=WP_000191073.1;Ontology_term=GO:0010124,GO:0097266;gbkey=CDS;gene=paaA;go_function=phenylacetyl-CoA 1%2C2-epoxidase activity|0097266||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415906.1;locus_tag=AB25_RS14700;product=1%2C2-phenylacetyl-CoA epoxidase subunit PaaA;protein_id=WP_000191073.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 163454 165499 . + . ID=gene-AB25_RS14695;Name=paaZ;gbkey=Gene;gene=paaZ;gene_biotype=protein_coding;locus_tag=AB25_RS14695;old_locus_tag=AB25_2135 NZ_JJMC01000029.1 Protein Homology CDS 163454 165499 . + 0 ID=cds-WP_032295985.1;Parent=gene-AB25_RS14695;Dbxref=GenBank:WP_032295985.1;Name=WP_032295985.1;gbkey=CDS;gene=paaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415905.1;locus_tag=AB25_RS14695;product=phenylacetic acid degradation bifunctional protein PaaZ;protein_id=WP_032295985.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 165747 168020 . + . ID=gene-AB25_RS14690;Name=tynA;gbkey=Gene;gene=tynA;gene_biotype=protein_coding;locus_tag=AB25_RS14690;old_locus_tag=AB25_2137 NZ_JJMC01000029.1 Protein Homology CDS 165747 168020 . + 0 ID=cds-WP_000535472.1;Parent=gene-AB25_RS14690;Dbxref=GenBank:WP_000535472.1;Name=WP_000535472.1;Ontology_term=GO:0009308,GO:0005507,GO:0008131,GO:0048038;gbkey=CDS;gene=tynA;go_function=copper ion binding|0005507||IEA,primary methylamine oxidase activity|0008131||IEA,quinone binding|0048038||IEA;go_process=amine metabolic process|0009308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415904.3;locus_tag=AB25_RS14690;product=primary-amine oxidase;protein_id=WP_000535472.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 168078 169577 . - . ID=gene-AB25_RS14685;Name=feaB;gbkey=Gene;gene=feaB;gene_biotype=protein_coding;gene_synonym=maoB,padA;locus_tag=AB25_RS14685;old_locus_tag=AB25_2138 NZ_JJMC01000029.1 Protein Homology CDS 168078 169577 . - 0 ID=cds-WP_000138615.1;Parent=gene-AB25_RS14685;Dbxref=GenBank:WP_000138615.1;Name=WP_000138615.1;gbkey=CDS;gene=feaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415903.4;locus_tag=AB25_RS14685;product=phenylacetaldehyde dehydrogenase;protein_id=WP_000138615.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 169813 170718 . + . ID=gene-AB25_RS14680;Name=feaR;gbkey=Gene;gene=feaR;gene_biotype=protein_coding;locus_tag=AB25_RS14680;old_locus_tag=AB25_2139 NZ_JJMC01000029.1 Protein Homology CDS 169813 170718 . + 0 ID=cds-WP_001391839.1;Parent=gene-AB25_RS14680;Dbxref=GenBank:WP_001391839.1;Name=WP_001391839.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=feaR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415902.1;locus_tag=AB25_RS14680;product=transcriptional regulator FeaR;protein_id=WP_001391839.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 170890 171219 . - . ID=gene-AB25_RS14675;Name=ydbL;gbkey=Gene;gene=ydbL;gene_biotype=protein_coding;locus_tag=AB25_RS14675;old_locus_tag=AB25_2140 NZ_JJMC01000029.1 Protein Homology CDS 170890 171219 . - 0 ID=cds-WP_001325798.1;Parent=gene-AB25_RS14675;Dbxref=GenBank:WP_001325798.1;Name=WP_001325798.1;gbkey=CDS;gene=ydbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707676.2;locus_tag=AB25_RS14675;product=YdbL family protein;protein_id=WP_001325798.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 171224 171409 . - . ID=gene-AB25_RS14670;Name=ynbE;gbkey=Gene;gene=ynbE;gene_biotype=protein_coding;locus_tag=AB25_RS14670;old_locus_tag=AB25_2141 NZ_JJMC01000029.1 Protein Homology CDS 171224 171409 . - 0 ID=cds-WP_000698141.1;Parent=gene-AB25_RS14670;Dbxref=GenBank:WP_000698141.1;Name=WP_000698141.1;gbkey=CDS;gene=ynbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415900.1;locus_tag=AB25_RS14670;product=YnbE family lipoprotein;protein_id=WP_000698141.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 171406 174045 . - . ID=gene-AB25_RS14665;Name=ydbH;gbkey=Gene;gene=ydbH;gene_biotype=protein_coding;locus_tag=AB25_RS14665;old_locus_tag=AB25_2142 NZ_JJMC01000029.1 Protein Homology CDS 171406 174045 . - 0 ID=cds-WP_000900996.1;Parent=gene-AB25_RS14665;Dbxref=GenBank:WP_000900996.1;Name=WP_000900996.1;gbkey=CDS;gene=ydbH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415899.1;locus_tag=AB25_RS14665;product=YdbH family protein;protein_id=WP_000900996.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 174253 175242 . + . ID=gene-AB25_RS14660;Name=ldhA;gbkey=Gene;gene=ldhA;gene_biotype=protein_coding;locus_tag=AB25_RS14660;old_locus_tag=AB25_2143 NZ_JJMC01000029.1 Protein Homology CDS 174253 175242 . + 0 ID=cds-WP_000762229.1;Parent=gene-AB25_RS14660;Dbxref=GenBank:WP_000762229.1;Name=WP_000762229.1;gbkey=CDS;gene=ldhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310029.1;locus_tag=AB25_RS14660;product=D-lactate dehydrogenase;protein_id=WP_000762229.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 175353 175775 . + . ID=gene-AB25_RS14655;Name=hslJ;gbkey=Gene;gene=hslJ;gene_biotype=protein_coding;locus_tag=AB25_RS14655;old_locus_tag=AB25_2144 NZ_JJMC01000029.1 Protein Homology CDS 175353 175775 . + 0 ID=cds-WP_001298828.1;Parent=gene-AB25_RS14655;Dbxref=GenBank:WP_001298828.1;Name=WP_001298828.1;gbkey=CDS;gene=hslJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415897.1;locus_tag=AB25_RS14655;product=heat shock protein HslJ;protein_id=WP_001298828.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 175772 176038 . - . ID=gene-AB25_RS14650;Name=ydbJ;gbkey=Gene;gene=ydbJ;gene_biotype=protein_coding;locus_tag=AB25_RS14650;old_locus_tag=AB25_2145 NZ_JJMC01000029.1 Protein Homology CDS 175772 176038 . - 0 ID=cds-WP_001295715.1;Parent=gene-AB25_RS14650;Dbxref=GenBank:WP_001295715.1;Name=WP_001295715.1;gbkey=CDS;gene=ydbJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588453.1;locus_tag=AB25_RS14650;product=putative hemolysin;protein_id=WP_001295715.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 176312 179836 . + . ID=gene-AB25_RS14645;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=AB25_RS14645;old_locus_tag=AB25_2147 NZ_JJMC01000029.1 Protein Homology CDS 176312 179836 . + 0 ID=cds-WP_032170790.1;Parent=gene-AB25_RS14645;Dbxref=GenBank:WP_032170790.1;Name=WP_032170790.1;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310027.1;locus_tag=AB25_RS14645;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=WP_032170790.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 180204 181337 . + . ID=gene-AB25_RS14640;Name=ompN;gbkey=Gene;gene=ompN;gene_biotype=protein_coding;locus_tag=AB25_RS14640;old_locus_tag=AB25_2148 NZ_JJMC01000029.1 Protein Homology CDS 180204 181337 . + 0 ID=cds-WP_000837924.1;Parent=gene-AB25_RS14640;Dbxref=GenBank:WP_000837924.1;Name=WP_000837924.1;gbkey=CDS;gene=ompN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415895.1;locus_tag=AB25_RS14640;product=porin OmpN;protein_id=WP_000837924.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 181478 181912 . + . ID=gene-AB25_RS14635;Name=uspF;gbkey=Gene;gene=uspF;gene_biotype=protein_coding;locus_tag=AB25_RS14635;old_locus_tag=AB25_2149 NZ_JJMC01000029.1 Protein Homology CDS 181478 181912 . + 0 ID=cds-WP_001082294.1;Parent=gene-AB25_RS14635;Dbxref=GenBank:WP_001082294.1;Name=WP_001082294.1;gbkey=CDS;gene=uspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310024.2;locus_tag=AB25_RS14635;product=universal stress protein UspF;protein_id=WP_001082294.1;transl_table=11 NZ_JJMC01000029.1 RefSeq gene 182177 182302 . - . ID=gene-AB25_RS32695;Name=AB25_RS32695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32695;old_locus_tag=AB25_2150 NZ_JJMC01000029.1 GeneMarkS-2+ CDS 182177 182302 . - 0 ID=cds-WP_001614539.1;Parent=gene-AB25_RS32695;Dbxref=GenBank:WP_001614539.1;Name=WP_001614539.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB25_RS32695;product=hypothetical protein;protein_id=WP_001614539.1;transl_table=11 NZ_JJMC01000029.1 RefSeq pseudogene 182508 182916 . + . ID=gene-AB25_RS0125340;Name=sitA;end_range=182916,.;gbkey=Gene;gene=sitA;gene_biotype=pseudogene;locus_tag=AB25_RS0125340;old_locus_tag=AB25_2151;partial=true;pseudo=true NZ_JJMC01000029.1 Protein Homology CDS 182508 182916 . + 0 ID=cds-AB25_RS0125340;Parent=gene-AB25_RS0125340;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=182916,.;gbkey=CDS;gene=sitA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000949004.1;locus_tag=AB25_RS0125340;partial=true;product=iron/manganese ABC transporter substrate-binding protein SitA;pseudo=true;transl_table=11 ##sequence-region NZ_JJMC01000030.1 1 84854 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000030.1 RefSeq region 1 84854 . + . ID=NZ_JJMC01000030.1:1..84854;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000030.1 RefSeq pseudogene 1 242 . + . ID=gene-AB25_RS32410;Name=tnpA;end_range=242,.;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=AB25_RS32410;partial=true;pseudo=true;start_range=.,1 NZ_JJMC01000030.1 Protein Homology CDS 1 242 . + 2 ID=cds-AB25_RS32410;Parent=gene-AB25_RS32410;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0004803;end_range=242,.;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001278583.1;locus_tag=AB25_RS32410;partial=true;product=IS200/IS605 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 1221 2018 . - . ID=gene-AB25_RS14630;Name=ybcM;gbkey=Gene;gene=ybcM;gene_biotype=protein_coding;locus_tag=AB25_RS14630;old_locus_tag=AB25_2152 NZ_JJMC01000030.1 Protein Homology CDS 1221 2018 . - 0 ID=cds-WP_032171456.1;Parent=gene-AB25_RS14630;Dbxref=GenBank:WP_032171456.1;Name=WP_032171456.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=ybcM;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415078.1;locus_tag=AB25_RS14630;product=helix-turn-helix transcriptional regulator;protein_id=WP_032171456.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 2028 2579 . - . ID=gene-AB25_RS0125350;Name=ybcL;gbkey=Gene;gene=ybcL;gene_biotype=protein_coding;locus_tag=AB25_RS0125350 NZ_JJMC01000030.1 Protein Homology CDS 2028 2579 . - 0 ID=cds-WP_000734031.1;Parent=gene-AB25_RS0125350;Dbxref=GenBank:WP_000734031.1;Name=WP_000734031.1;gbkey=CDS;gene=ybcL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707821.1;locus_tag=AB25_RS0125350;product=Raf kinase inhibitor-like protein YbcL;protein_id=WP_000734031.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 2748 3080 . - . ID=gene-AB25_RS14625;Name=emrE;gbkey=Gene;gene=emrE;gene_biotype=protein_coding;locus_tag=AB25_RS14625;old_locus_tag=AB25_2153 NZ_JJMC01000030.1 Protein Homology CDS 2748 3080 . - 0 ID=cds-WP_001070440.1;Parent=gene-AB25_RS14625;Dbxref=GenBank:WP_001070440.1;Name=WP_001070440.1;gbkey=CDS;gene=emrE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707822.1;locus_tag=AB25_RS14625;product=multidrug efflux SMR transporter EmrE;protein_id=WP_001070440.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 3414 3728 . - . ID=gene-AB25_RS14620;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=AB25_RS14620;old_locus_tag=AB25_2154 NZ_JJMC01000030.1 Protein Homology CDS 3414 3728 . - 0 ID=cds-WP_001274295.1;Parent=gene-AB25_RS14620;Dbxref=GenBank:WP_001274295.1;Name=WP_001274295.1;Ontology_term=GO:0071973,GO:0003774,GO:0009431;gbkey=CDS;gene=fliE;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310703.1;locus_tag=AB25_RS14620;product=flagellar hook-basal body complex protein FliE;protein_id=WP_001274295.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 3943 5601 . + . ID=gene-AB25_RS14615;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=AB25_RS14615;old_locus_tag=AB25_2156 NZ_JJMC01000030.1 Protein Homology CDS 3943 5601 . + 0 ID=cds-WP_000994477.1;Parent=gene-AB25_RS14615;Dbxref=GenBank:WP_000994477.1;Name=WP_000994477.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416448.1;locus_tag=AB25_RS14615;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WP_000994477.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 5594 6589 . + . ID=gene-AB25_RS14610;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=AB25_RS14610;old_locus_tag=AB25_2157 NZ_JJMC01000030.1 Protein Homology CDS 5594 6589 . + 0 ID=cds-WP_000067950.1;Parent=gene-AB25_RS14610;Dbxref=GenBank:WP_000067950.1;Name=WP_000067950.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310705.1;locus_tag=AB25_RS14610;product=flagellar motor switch protein FliG;protein_id=WP_000067950.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 6582 7268 . + . ID=gene-AB25_RS14605;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=AB25_RS14605;old_locus_tag=AB25_2158 NZ_JJMC01000030.1 Protein Homology CDS 6582 7268 . + 0 ID=cds-WP_001282709.1;Parent=gene-AB25_RS14605;Dbxref=GenBank:WP_001282709.1;Name=WP_001282709.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliH;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416450.2;locus_tag=AB25_RS14605;product=flagellar assembly protein FliH;protein_id=WP_001282709.1;transl_table=11 NZ_JJMC01000030.1 RefSeq pseudogene 7268 7813 . + . ID=gene-AB25_RS30305;Name=fliI;end_range=7813,.;gbkey=Gene;gene=fliI;gene_biotype=pseudogene;locus_tag=AB25_RS30305;partial=true;pseudo=true NZ_JJMC01000030.1 Protein Homology CDS 7268 7813 . + 0 ID=cds-AB25_RS30305;Parent=gene-AB25_RS30305;Note=involved in type III protein export during flagellum assembly%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=7813,.;gbkey=CDS;gene=fliI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310707.1;locus_tag=AB25_RS30305;partial=true;product=flagellum-specific ATP synthase FliI;pseudo=true;transl_table=11 NZ_JJMC01000030.1 RefSeq pseudogene 8093 8986 . + . ID=gene-AB25_RS30310;Name=AB25_RS30310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS30310;partial=true;pseudo=true;start_range=.,8093 NZ_JJMC01000030.1 Protein Homology CDS 8093 8986 . + 0 ID=cds-AB25_RS30310;Parent=gene-AB25_RS30310;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009058,GO:0030254,GO:0046034,GO:0005524,GO:0016887,GO:0030257;gbkey=CDS;go_component=type III protein secretion system complex|0030257||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=biosynthetic process|0009058||IEA,protein secretion by the type III secretion system|0030254||IEA,ATP metabolic process|0046034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416451.1;locus_tag=AB25_RS30310;partial=true;product=FliI/YscN family ATPase;pseudo=true;start_range=.,8093;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 9005 9448 . + . ID=gene-AB25_RS14600;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=AB25_RS14600;old_locus_tag=AB25_2160 NZ_JJMC01000030.1 Protein Homology CDS 9005 9448 . + 0 ID=cds-WP_000807584.1;Parent=gene-AB25_RS14600;Dbxref=GenBank:WP_000807584.1;Name=WP_000807584.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310708.1;locus_tag=AB25_RS14600;product=flagellar export protein FliJ;protein_id=WP_000807584.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 9445 10572 . + . ID=gene-AB25_RS14595;Name=fliK;gbkey=Gene;gene=fliK;gene_biotype=protein_coding;locus_tag=AB25_RS14595;old_locus_tag=AB25_2161 NZ_JJMC01000030.1 Protein Homology CDS 9445 10572 . + 0 ID=cds-WP_032170807.1;Parent=gene-AB25_RS14595;Dbxref=GenBank:WP_032170807.1;Name=WP_032170807.1;gbkey=CDS;gene=fliK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707828.1;locus_tag=AB25_RS14595;product=flagellar hook-length control protein FliK;protein_id=WP_032170807.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 10677 11141 . + . ID=gene-AB25_RS14590;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=AB25_RS14590;old_locus_tag=AB25_2162 NZ_JJMC01000030.1 Protein Homology CDS 10677 11141 . + 0 ID=cds-WP_000133106.1;Parent=gene-AB25_RS14590;Dbxref=GenBank:WP_000133106.1;Name=WP_000133106.1;Ontology_term=GO:0006935,GO:0071973,GO:0009425;gbkey=CDS;gene=fliL;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310710.1;locus_tag=AB25_RS14590;product=flagellar basal body-associated protein FliL;protein_id=WP_000133106.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 11146 12150 . + . ID=gene-AB25_RS14585;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=AB25_RS14585;old_locus_tag=AB25_2163 NZ_JJMC01000030.1 Protein Homology CDS 11146 12150 . + 0 ID=cds-WP_001295641.1;Parent=gene-AB25_RS14585;Dbxref=GenBank:WP_001295641.1;Name=WP_001295641.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127760.1;locus_tag=AB25_RS14585;product=flagellar motor switch protein FliM;protein_id=WP_001295641.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 12147 12560 . + . ID=gene-AB25_RS14580;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=AB25_RS14580;old_locus_tag=AB25_2164 NZ_JJMC01000030.1 Protein Homology CDS 12147 12560 . + 0 ID=cds-WP_001282098.1;Parent=gene-AB25_RS14580;Dbxref=GenBank:WP_001282098.1;Name=WP_001282098.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310712.1;locus_tag=AB25_RS14580;product=flagellar motor switch protein FliN;protein_id=WP_001282098.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 12563 12928 . + . ID=gene-AB25_RS14575;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=AB25_RS14575;old_locus_tag=AB25_2165 NZ_JJMC01000030.1 Protein Homology CDS 12563 12928 . + 0 ID=cds-WP_032170809.1;Parent=gene-AB25_RS14575;Dbxref=GenBank:WP_032170809.1;Name=WP_032170809.1;Ontology_term=GO:0044781,GO:0016020;gbkey=CDS;gene=fliO;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310713.2;locus_tag=AB25_RS14575;product=flagellar biosynthetic protein FliO;protein_id=WP_032170809.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 12928 13665 . + . ID=gene-AB25_RS14570;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=AB25_RS14570;old_locus_tag=AB25_2166 NZ_JJMC01000030.1 Protein Homology CDS 12928 13665 . + 0 ID=cds-WP_001253441.1;Parent=gene-AB25_RS14570;Dbxref=GenBank:WP_001253441.1;Name=WP_001253441.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=fliP;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310714.1;locus_tag=AB25_RS14570;product=flagellar type III secretion system pore protein FliP;protein_id=WP_001253441.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 13675 13944 . + . ID=gene-AB25_RS14565;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=AB25_RS14565;old_locus_tag=AB25_2167 NZ_JJMC01000030.1 Protein Homology CDS 13675 13944 . + 0 ID=cds-WP_000187358.1;Parent=gene-AB25_RS14565;Dbxref=GenBank:WP_000187358.1;Name=WP_000187358.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=fliQ;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365797.1;locus_tag=AB25_RS14565;product=flagellar biosynthesis protein FliQ;protein_id=WP_000187358.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 13953 14738 . + . ID=gene-AB25_RS14560;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=AB25_RS14560;old_locus_tag=AB25_2168 NZ_JJMC01000030.1 Protein Homology CDS 13953 14738 . + 0 ID=cds-WP_000983991.1;Parent=gene-AB25_RS14560;Dbxref=GenBank:WP_000983991.1;Name=WP_000983991.1;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310716.1;locus_tag=AB25_RS14560;product=flagellar biosynthetic protein FliR;protein_id=WP_000983991.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 15028 15651 . + . ID=gene-AB25_RS14555;Name=rcsA;gbkey=Gene;gene=rcsA;gene_biotype=protein_coding;locus_tag=AB25_RS14555;old_locus_tag=AB25_2169 NZ_JJMC01000030.1 Protein Homology CDS 15028 15651 . + 0 ID=cds-WP_000103987.1;Parent=gene-AB25_RS14555;Dbxref=GenBank:WP_000103987.1;Name=WP_000103987.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rcsA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707836.1;locus_tag=AB25_RS14555;product=transcriptional regulator RcsA;protein_id=WP_000103987.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 15695 15883 . - . ID=gene-AB25_RS14550;Name=dsrB;gbkey=Gene;gene=dsrB;gene_biotype=protein_coding;locus_tag=AB25_RS14550;old_locus_tag=AB25_2170 NZ_JJMC01000030.1 Protein Homology CDS 15695 15883 . - 0 ID=cds-WP_000867217.1;Parent=gene-AB25_RS14550;Dbxref=GenBank:WP_000867217.1;Name=WP_000867217.1;gbkey=CDS;gene=dsrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310718.1;locus_tag=AB25_RS14550;product=protein DsrB;protein_id=WP_000867217.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 16046 16273 . + . ID=gene-AB25_RS14545;Name=yodD;gbkey=Gene;gene=yodD;gene_biotype=protein_coding;locus_tag=AB25_RS14545;old_locus_tag=AB25_2171 NZ_JJMC01000030.1 Protein Homology CDS 16046 16273 . + 0 ID=cds-WP_000844800.1;Parent=gene-AB25_RS14545;Dbxref=GenBank:WP_000844800.1;Name=WP_000844800.1;gbkey=CDS;gene=yodD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416463.4;locus_tag=AB25_RS14545;product=peroxide/acid resistance protein YodD;protein_id=WP_000844800.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 16571 17386 . + . ID=gene-AB25_RS14540;Name=yedP;gbkey=Gene;gene=yedP;gene_biotype=protein_coding;locus_tag=AB25_RS14540;old_locus_tag=AB25_2172 NZ_JJMC01000030.1 Protein Homology CDS 16571 17386 . + 0 ID=cds-WP_000491501.1;Parent=gene-AB25_RS14540;Dbxref=GenBank:WP_000491501.1;Name=WP_000491501.1;Ontology_term=GO:0051479,GO:0050531;gbkey=CDS;gene=yedP;go_function=mannosyl-3-phosphoglycerate phosphatase activity|0050531||IEA;go_process=mannosylglycerate biosynthetic process|0051479||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310720.1;locus_tag=AB25_RS14540;product=mannosyl-3-phosphoglycerate phosphatase-related protein;protein_id=WP_000491501.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 17383 19041 . - . ID=gene-AB25_RS14535;Name=dgcQ;gbkey=Gene;gene=dgcQ;gene_biotype=protein_coding;locus_tag=AB25_RS14535;old_locus_tag=AB25_2173 NZ_JJMC01000030.1 Protein Homology CDS 17383 19041 . - 0 ID=cds-WP_071998855.1;Parent=gene-AB25_RS14535;Dbxref=GenBank:WP_071998855.1;Name=WP_071998855.1;gbkey=CDS;gene=dgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416465.2;locus_tag=AB25_RS14535;product=cellulose biosynthesis regulator diguanylate cyclase DgcQ;protein_id=WP_071998855.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 19248 19430 . - . ID=gene-AB25_RS14530;Name=yodC;gbkey=Gene;gene=yodC;gene_biotype=protein_coding;locus_tag=AB25_RS14530;old_locus_tag=AB25_2174 NZ_JJMC01000030.1 Protein Homology CDS 19248 19430 . - 0 ID=cds-WP_000009307.1;Parent=gene-AB25_RS14530;Dbxref=GenBank:WP_000009307.1;Name=WP_000009307.1;gbkey=CDS;gene=yodC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310722.1;locus_tag=AB25_RS14530;product=YodC family protein;protein_id=WP_000009307.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 19509 20426 . - . ID=gene-AB25_RS14525;Name=yedI;gbkey=Gene;gene=yedI;gene_biotype=protein_coding;locus_tag=AB25_RS14525;old_locus_tag=AB25_2175 NZ_JJMC01000030.1 Protein Homology CDS 19509 20426 . - 0 ID=cds-WP_000922683.1;Parent=gene-AB25_RS14525;Dbxref=GenBank:WP_000922683.1;Name=WP_000922683.1;gbkey=CDS;gene=yedI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310723.1;locus_tag=AB25_RS14525;product=DUF808 domain-containing protein;protein_id=WP_000922683.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 20599 21519 . + . ID=gene-AB25_RS14520;Name=yedA;gbkey=Gene;gene=yedA;gene_biotype=protein_coding;locus_tag=AB25_RS14520;old_locus_tag=AB25_2176 NZ_JJMC01000030.1 Protein Homology CDS 20599 21519 . + 0 ID=cds-WP_001212239.1;Parent=gene-AB25_RS14520;Dbxref=GenBank:WP_001212239.1;Name=WP_001212239.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yedA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310724.1;locus_tag=AB25_RS14520;product=drug/metabolite exporter YedA;protein_id=WP_001212239.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 21508 21978 . - . ID=gene-AB25_RS14515;Name=vsr;gbkey=Gene;gene=vsr;gene_biotype=protein_coding;locus_tag=AB25_RS14515;old_locus_tag=AB25_2177 NZ_JJMC01000030.1 Protein Homology CDS 21508 21978 . - 0 ID=cds-WP_000786004.1;Parent=gene-AB25_RS14515;Dbxref=GenBank:WP_000786004.1;Name=WP_000786004.1;gbkey=CDS;gene=vsr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416469.1;locus_tag=AB25_RS14515;product=VSPR family DNA mismatch endonuclease;protein_id=WP_000786004.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 21959 23377 . - . ID=gene-AB25_RS14510;Name=dcm;gbkey=Gene;gene=dcm;gene_biotype=protein_coding;locus_tag=AB25_RS14510;old_locus_tag=AB25_2178 NZ_JJMC01000030.1 Protein Homology CDS 21959 23377 . - 0 ID=cds-WP_032170812.1;Parent=gene-AB25_RS14510;Dbxref=GenBank:WP_032170812.1;Name=WP_032170812.1;gbkey=CDS;gene=dcm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310726.1;locus_tag=AB25_RS14510;product=DNA-cytosine methyltransferase;protein_id=WP_032170812.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 23444 24139 . - . ID=gene-AB25_RS14505;Name=yedJ;gbkey=Gene;gene=yedJ;gene_biotype=protein_coding;locus_tag=AB25_RS14505;old_locus_tag=AB25_2179 NZ_JJMC01000030.1 Protein Homology CDS 23444 24139 . - 0 ID=cds-WP_001422413.1;Parent=gene-AB25_RS14505;Dbxref=GenBank:WP_001422413.1;Name=WP_001422413.1;gbkey=CDS;gene=yedJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416471.1;locus_tag=AB25_RS14505;product=phosphohydrolase;protein_id=WP_001422413.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 24179 24460 . - . ID=gene-AB25_RS14500;Name=drpB;gbkey=Gene;gene=drpB;gene_biotype=protein_coding;locus_tag=AB25_RS14500;old_locus_tag=AB25_2180 NZ_JJMC01000030.1 Protein Homology CDS 24179 24460 . - 0 ID=cds-WP_248699938.1;Parent=gene-AB25_RS14500;Dbxref=GenBank:WP_248699938.1;Name=WP_248699938.1;Ontology_term=GO:0051301;gbkey=CDS;gene=drpB;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295638.1;locus_tag=AB25_RS14500;product=cell division protein DrpB;protein_id=WP_248699938.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 24725 24850 . - . ID=gene-AB25_RS32700;Name=AB25_RS32700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32700;old_locus_tag=AB25_2181 NZ_JJMC01000030.1 GeneMarkS-2+ CDS 24725 24850 . - 0 ID=cds-WP_272884148.1;Parent=gene-AB25_RS32700;Dbxref=GenBank:WP_272884148.1;Name=WP_272884148.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB25_RS32700;product=hypothetical protein;protein_id=WP_272884148.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 25109 26224 . + . ID=gene-AB25_RS14495;Name=AB25_RS14495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS14495;old_locus_tag=AB25_2182 NZ_JJMC01000030.1 Protein Homology CDS 25109 26224 . + 0 ID=cds-WP_000824355.1;Parent=gene-AB25_RS14495;Dbxref=GenBank:WP_000824355.1;Name=WP_000824355.1;Ontology_term=GO:0015288,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000824359.1;locus_tag=AB25_RS14495;product=porin;protein_id=WP_000824355.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 26819 27670 . + . ID=gene-AB25_RS14490;Name=hchA;gbkey=Gene;gene=hchA;gene_biotype=protein_coding;locus_tag=AB25_RS14490;old_locus_tag=AB25_2184 NZ_JJMC01000030.1 Protein Homology CDS 26819 27670 . + 0 ID=cds-WP_000218046.1;Parent=gene-AB25_RS14490;Dbxref=GenBank:WP_000218046.1;Name=WP_000218046.1;Ontology_term=GO:0036524;gbkey=CDS;gene=hchA;go_function=protein deglycase activity|0036524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416476.1;locus_tag=AB25_RS14490;product=glyoxalase III HchA;protein_id=WP_000218046.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 27777 29135 . - . ID=gene-AB25_RS14485;Name=hprS;gbkey=Gene;gene=hprS;gene_biotype=protein_coding;locus_tag=AB25_RS14485;old_locus_tag=AB25_2185 NZ_JJMC01000030.1 Protein Homology CDS 27777 29135 . - 0 ID=cds-WP_000826721.1;Parent=gene-AB25_RS14485;Dbxref=GenBank:WP_000826721.1;Name=WP_000826721.1;gbkey=CDS;gene=hprS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310733.1;locus_tag=AB25_RS14485;product=two-component system sensor histidine kinase HprS;protein_id=WP_000826721.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 29135 29806 . - . ID=gene-AB25_RS14480;Name=hprR;gbkey=Gene;gene=hprR;gene_biotype=protein_coding;locus_tag=AB25_RS14480;old_locus_tag=AB25_2186 NZ_JJMC01000030.1 Protein Homology CDS 29135 29806 . - 0 ID=cds-WP_001353857.1;Parent=gene-AB25_RS14480;Dbxref=GenBank:WP_001353857.1;Name=WP_001353857.1;gbkey=CDS;gene=hprR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707854.2;locus_tag=AB25_RS14480;product=response regulator transcription factor HprR;protein_id=WP_001353857.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 29939 30352 . + . ID=gene-AB25_RS14475;Name=hiuH;gbkey=Gene;gene=hiuH;gene_biotype=protein_coding;locus_tag=AB25_RS14475;old_locus_tag=AB25_2187 NZ_JJMC01000030.1 Protein Homology CDS 29939 30352 . + 0 ID=cds-WP_000920132.1;Parent=gene-AB25_RS14475;Dbxref=GenBank:WP_000920132.1;Name=WP_000920132.1;gbkey=CDS;gene=hiuH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310735.1;locus_tag=AB25_RS14475;product=hydroxyisourate hydrolase;protein_id=WP_000920132.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 30461 31465 . + . ID=gene-AB25_RS14470;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=AB25_RS14470;old_locus_tag=AB25_2188 NZ_JJMC01000030.1 Protein Homology CDS 30461 31465 . + 0 ID=cds-WP_032173468.1;Parent=gene-AB25_RS14470;Dbxref=GenBank:WP_032173468.1;Name=WP_032173468.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310736.1;locus_tag=AB25_RS14470;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WP_032173468.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 31466 32101 . + . ID=gene-AB25_RS14465;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=AB25_RS14465;old_locus_tag=AB25_2189 NZ_JJMC01000030.1 Protein Homology CDS 31466 32101 . + 0 ID=cds-WP_001240098.1;Parent=gene-AB25_RS14465;Dbxref=GenBank:WP_001240098.1;Name=WP_001240098.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707856.1;locus_tag=AB25_RS14465;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WP_001240098.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 32359 33009 . + . ID=gene-AB25_RS14460;Name=zinT;gbkey=Gene;gene=zinT;gene_biotype=protein_coding;locus_tag=AB25_RS14460;old_locus_tag=AB25_2190 NZ_JJMC01000030.1 Protein Homology CDS 32359 33009 . + 0 ID=cds-WP_001007779.1;Parent=gene-AB25_RS14460;Dbxref=GenBank:WP_001007779.1;Name=WP_001007779.1;Ontology_term=GO:0008270;gbkey=CDS;gene=zinT;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707857.1;locus_tag=AB25_RS14460;product=metal-binding protein ZinT;protein_id=WP_001007779.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 33679 33768 . - . ID=gene-AB25_RS14455;Name=AB25_RS14455;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS14455;old_locus_tag=AB25_2191 NZ_JJMC01000030.1 tRNAscan-SE tRNA 33679 33768 . - . ID=rna-AB25_RS14455;Parent=gene-AB25_RS14455;anticodon=(pos:complement(33732..33734));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS14455;product=tRNA-Ser NZ_JJMC01000030.1 tRNAscan-SE exon 33679 33768 . - . ID=exon-AB25_RS14455-1;Parent=rna-AB25_RS14455;anticodon=(pos:complement(33732..33734));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS14455;product=tRNA-Ser NZ_JJMC01000030.1 RefSeq gene 33862 34659 . + . ID=gene-AB25_RS14450;Name=mtfA;gbkey=Gene;gene=mtfA;gene_biotype=protein_coding;locus_tag=AB25_RS14450;old_locus_tag=AB25_2192 NZ_JJMC01000030.1 Protein Homology CDS 33862 34659 . + 0 ID=cds-WP_001325918.1;Parent=gene-AB25_RS14450;Dbxref=GenBank:WP_001325918.1;Name=WP_001325918.1;Ontology_term=GO:0008237;gbkey=CDS;gene=mtfA;go_function=metallopeptidase activity|0008237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310801.2;locus_tag=AB25_RS14450;product=DgsA anti-repressor MtfA;protein_id=WP_001325918.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 34760 34835 . + . ID=gene-AB25_RS14445;Name=AB25_RS14445;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS14445;old_locus_tag=AB25_2193 NZ_JJMC01000030.1 tRNAscan-SE tRNA 34760 34835 . + . ID=rna-AB25_RS14445;Parent=gene-AB25_RS14445;anticodon=(pos:34793..34795);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS14445;product=tRNA-Asn NZ_JJMC01000030.1 tRNAscan-SE exon 34760 34835 . + . ID=exon-AB25_RS14445-1;Parent=rna-AB25_RS14445;anticodon=(pos:34793..34795);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS14445;product=tRNA-Asn NZ_JJMC01000030.1 RefSeq gene 34997 36259 . + . ID=gene-AB25_RS14440;Name=AB25_RS14440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS14440;old_locus_tag=AB25_2194 NZ_JJMC01000030.1 Protein Homology CDS 34997 36259 . + 0 ID=cds-WP_032170815.1;Parent=gene-AB25_RS14440;Dbxref=GenBank:WP_032170815.1;Name=WP_032170815.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227760.1;locus_tag=AB25_RS14440;product=tyrosine-type recombinase/integrase;protein_id=WP_032170815.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 36453 37757 . - . ID=gene-AB25_RS14435;Name=ybtS;gbkey=Gene;gene=ybtS;gene_biotype=protein_coding;locus_tag=AB25_RS14435;old_locus_tag=AB25_2195 NZ_JJMC01000030.1 Protein Homology CDS 36453 37757 . - 0 ID=cds-WP_032170817.1;Parent=gene-AB25_RS14435;Dbxref=GenBank:WP_032170817.1;Name=WP_032170817.1;gbkey=CDS;gene=ybtS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227761.1;locus_tag=AB25_RS14435;product=yersiniabactin biosynthesis salicylate synthase Irp9/YbtS;protein_id=WP_032170817.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 37785 39065 . - . ID=gene-AB25_RS14430;Name=ybtX;gbkey=Gene;gene=ybtX;gene_biotype=protein_coding;locus_tag=AB25_RS14430;old_locus_tag=AB25_2196 NZ_JJMC01000030.1 Protein Homology CDS 37785 39065 . - 0 ID=cds-WP_001286281.1;Parent=gene-AB25_RS14430;Dbxref=GenBank:WP_001286281.1;Name=WP_001286281.1;gbkey=CDS;gene=ybtX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227762.1;locus_tag=AB25_RS14430;product=yersiniabactin-associated zinc MFS transporter YbtX;protein_id=WP_001286281.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 39058 40860 . - . ID=gene-AB25_RS14425;Name=ybtQ;gbkey=Gene;gene=ybtQ;gene_biotype=protein_coding;locus_tag=AB25_RS14425;old_locus_tag=AB25_2197 NZ_JJMC01000030.1 Protein Homology CDS 39058 40860 . - 0 ID=cds-WP_032170819.1;Parent=gene-AB25_RS14425;Dbxref=GenBank:WP_032170819.1;Name=WP_032170819.1;gbkey=CDS;gene=ybtQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227763.1;locus_tag=AB25_RS14425;product=yersiniabactin ABC transporter ATP-binding/permease protein YbtQ;protein_id=WP_032170819.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 40847 42559 . - . ID=gene-AB25_RS14420;Name=ybtP;gbkey=Gene;gene=ybtP;gene_biotype=protein_coding;locus_tag=AB25_RS14420;old_locus_tag=AB25_2198 NZ_JJMC01000030.1 Protein Homology CDS 40847 42559 . - 0 ID=cds-WP_032295990.1;Parent=gene-AB25_RS14420;Dbxref=GenBank:WP_032295990.1;Name=WP_032295990.1;gbkey=CDS;gene=ybtP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227764.1;locus_tag=AB25_RS14420;product=yersiniabactin ABC transporter ATP-binding/permease protein YbtP;protein_id=WP_032295990.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 42816 43775 . + . ID=gene-AB25_RS14415;Name=ybtA;gbkey=Gene;gene=ybtA;gene_biotype=protein_coding;locus_tag=AB25_RS14415;old_locus_tag=AB25_2199 NZ_JJMC01000030.1 Protein Homology CDS 42816 43775 . + 0 ID=cds-WP_000140405.1;Parent=gene-AB25_RS14415;Dbxref=GenBank:WP_000140405.1;Name=WP_000140405.1;gbkey=CDS;gene=ybtA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227765.1;locus_tag=AB25_RS14415;product=yersiniabactin transcriptional regulator YbtA;protein_id=WP_000140405.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 43966 50073 . + . ID=gene-AB25_RS14410;Name=irp2;gbkey=Gene;gene=irp2;gene_biotype=protein_coding;locus_tag=AB25_RS14410;old_locus_tag=AB25_2200 NZ_JJMC01000030.1 Protein Homology CDS 43966 50073 . + 0 ID=cds-WP_032170822.1;Parent=gene-AB25_RS14410;Dbxref=GenBank:WP_032170822.1;Name=WP_032170822.1;Ontology_term=GO:1904091;gbkey=CDS;gene=irp2;go_function=non-ribosomal peptide synthetase activity|1904091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227766.1;locus_tag=AB25_RS14410;product=yersiniabactin non-ribosomal peptide synthetase HMWP2;protein_id=WP_032170822.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 50161 59652 . + . ID=gene-AB25_RS14405;Name=irp1;gbkey=Gene;gene=irp1;gene_biotype=protein_coding;locus_tag=AB25_RS14405;old_locus_tag=AB25_2201 NZ_JJMC01000030.1 Protein Homology CDS 50161 59652 . + 0 ID=cds-WP_032295991.1;Parent=gene-AB25_RS14405;Dbxref=GenBank:WP_032295991.1;Name=WP_032295991.1;gbkey=CDS;gene=irp1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227767.1;locus_tag=AB25_RS14405;product=yersiniabactin polyketide synthase HMWP1;protein_id=WP_032295991.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 59649 60749 . + . ID=gene-AB25_RS14400;Name=ybtU;gbkey=Gene;gene=ybtU;gene_biotype=protein_coding;locus_tag=AB25_RS14400;old_locus_tag=AB25_2202 NZ_JJMC01000030.1 Protein Homology CDS 59649 60749 . + 0 ID=cds-WP_000982873.1;Parent=gene-AB25_RS14400;Dbxref=GenBank:WP_000982873.1;Name=WP_000982873.1;gbkey=CDS;gene=ybtU;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227768.1;locus_tag=AB25_RS14400;product=yersiniabactin biosynthesis oxidoreductase YbtU;protein_id=WP_000982873.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 60746 61549 . + . ID=gene-AB25_RS14395;Name=ybtT;gbkey=Gene;gene=ybtT;gene_biotype=protein_coding;locus_tag=AB25_RS14395;old_locus_tag=AB25_2203 NZ_JJMC01000030.1 Protein Homology CDS 60746 61549 . + 0 ID=cds-WP_000194282.1;Parent=gene-AB25_RS14395;Dbxref=GenBank:WP_000194282.1;Name=WP_000194282.1;gbkey=CDS;gene=ybtT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212799.1;locus_tag=AB25_RS14395;product=yersiniabactin biosynthesis thioesterase YbtT;protein_id=WP_000194282.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 61553 63130 . + . ID=gene-AB25_RS14390;Name=ybtE;gbkey=Gene;gene=ybtE;gene_biotype=protein_coding;locus_tag=AB25_RS14390;old_locus_tag=AB25_2204 NZ_JJMC01000030.1 Protein Homology CDS 61553 63130 . + 0 ID=cds-WP_001088828.1;Parent=gene-AB25_RS14390;Dbxref=GenBank:WP_001088828.1;Name=WP_001088828.1;gbkey=CDS;gene=ybtE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227770.1;locus_tag=AB25_RS14390;product=yersiniabactin biosynthesis salycil-AMP ligase YbtE;protein_id=WP_001088828.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 63262 65283 . + . ID=gene-AB25_RS14385;Name=fyuA;gbkey=Gene;gene=fyuA;gene_biotype=protein_coding;locus_tag=AB25_RS14385;old_locus_tag=AB25_2205 NZ_JJMC01000030.1 Protein Homology CDS 63262 65283 . + 0 ID=cds-WP_000784549.1;Parent=gene-AB25_RS14385;Dbxref=GenBank:WP_000784549.1;Name=WP_000784549.1;gbkey=CDS;gene=fyuA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227771.1;locus_tag=AB25_RS14385;product=siderophore yersiniabactin receptor FyuA;protein_id=WP_000784549.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 65973 66632 . + . ID=gene-AB25_RS0125385;Name=AB25_RS0125385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0125385 NZ_JJMC01000030.1 Protein Homology CDS 65973 66632 . + 0 ID=cds-WP_042049146.1;Parent=gene-AB25_RS0125385;Dbxref=GenBank:WP_042049146.1;Name=WP_042049146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001429238.1;locus_tag=AB25_RS0125385;product=inverse autotransporter beta domain-containing protein;protein_id=WP_042049146.1;transl_table=11 NZ_JJMC01000030.1 RefSeq pseudogene 66610 68741 . + . ID=gene-AB25_RS14375;Name=AB25_RS14375;end_range=68741,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS14375;old_locus_tag=AB25_2208;partial=true;pseudo=true;start_range=.,66610 NZ_JJMC01000030.1 Protein Homology CDS 66610 68741 . + 0 ID=cds-AB25_RS14375;Parent=gene-AB25_RS14375;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=68741,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416485.4;locus_tag=AB25_RS14375;partial=true;product=Ig-like domain-containing protein;pseudo=true;start_range=.,66610;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 68902 69954 . - . ID=gene-AB25_RS14370;Name=AB25_RS14370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS14370;old_locus_tag=AB25_2209 NZ_JJMC01000030.1 Protein Homology CDS 68902 69954 . - 0 ID=cds-WP_032170828.1;Parent=gene-AB25_RS14370;Dbxref=GenBank:WP_032170828.1;Name=WP_032170828.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310804.1;locus_tag=AB25_RS14370;product=glycosyltransferase family 9 protein;protein_id=WP_032170828.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 70269 71585 . + . ID=gene-AB25_RS14365;Name=shiA;gbkey=Gene;gene=shiA;gene_biotype=protein_coding;locus_tag=AB25_RS14365;old_locus_tag=AB25_2210 NZ_JJMC01000030.1 Protein Homology CDS 70269 71585 . + 0 ID=cds-WP_000378563.1;Parent=gene-AB25_RS14365;Dbxref=GenBank:WP_000378563.1;Name=WP_000378563.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=shiA;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310805.1;locus_tag=AB25_RS14365;product=shikimate transporter;protein_id=WP_000378563.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 71687 73141 . + . ID=gene-AB25_RS14360;Name=amn;gbkey=Gene;gene=amn;gene_biotype=protein_coding;locus_tag=AB25_RS14360;old_locus_tag=AB25_2211 NZ_JJMC01000030.1 Protein Homology CDS 71687 73141 . + 0 ID=cds-WP_001060232.1;Parent=gene-AB25_RS14360;Dbxref=GenBank:WP_001060232.1;Name=WP_001060232.1;Ontology_term=GO:0009116,GO:0044209,GO:0008714;gbkey=CDS;gene=amn;go_function=AMP nucleosidase activity|0008714||IEA;go_process=nucleoside metabolic process|0009116||IEA,AMP salvage|0044209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310806.1;locus_tag=AB25_RS14360;product=AMP nucleosidase;protein_id=WP_001060232.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 73484 74200 . + . ID=gene-AB25_RS14355;Name=yeeN;gbkey=Gene;gene=yeeN;gene_biotype=protein_coding;locus_tag=AB25_RS14355;old_locus_tag=AB25_2212 NZ_JJMC01000030.1 Protein Homology CDS 73484 74200 . + 0 ID=cds-WP_032170830.1;Parent=gene-AB25_RS14355;Dbxref=GenBank:WP_032170830.1;Name=WP_032170830.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=yeeN;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707889.1;locus_tag=AB25_RS14355;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_032170830.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 74653 74728 . - . ID=gene-AB25_RS14350;Name=AB25_RS14350;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS14350;old_locus_tag=AB25_2214 NZ_JJMC01000030.1 tRNAscan-SE tRNA 74653 74728 . - . ID=rna-AB25_RS14350;Parent=gene-AB25_RS14350;anticodon=(pos:complement(74693..74695));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS14350;product=tRNA-Asn NZ_JJMC01000030.1 tRNAscan-SE exon 74653 74728 . - . ID=exon-AB25_RS14350-1;Parent=rna-AB25_RS14350;anticodon=(pos:complement(74693..74695));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS14350;product=tRNA-Asn NZ_JJMC01000030.1 RefSeq pseudogene 74829 76316 . - . ID=gene-AB25_RS14345;Name=yeeO;gbkey=Gene;gene=yeeO;gene_biotype=pseudogene;locus_tag=AB25_RS14345;old_locus_tag=AB25_2215;pseudo=true NZ_JJMC01000030.1 Protein Homology CDS 74829 76316 . - 0 ID=cds-AB25_RS14345;Parent=gene-AB25_RS14345;Note=internal stop;gbkey=CDS;gene=yeeO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001323172.1;locus_tag=AB25_RS14345;product=toxic metabolite efflux MATE transporter YeeO;pseudo=true;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 76477 76552 . + . ID=gene-AB25_RS14340;Name=AB25_RS14340;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS14340;old_locus_tag=AB25_2217 NZ_JJMC01000030.1 tRNAscan-SE tRNA 76477 76552 . + . ID=rna-AB25_RS14340;Parent=gene-AB25_RS14340;anticodon=(pos:76510..76512);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS14340;product=tRNA-Asn NZ_JJMC01000030.1 tRNAscan-SE exon 76477 76552 . + . ID=exon-AB25_RS14340-1;Parent=rna-AB25_RS14340;anticodon=(pos:76510..76512);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS14340;product=tRNA-Asn NZ_JJMC01000030.1 RefSeq gene 76590 77540 . - . ID=gene-AB25_RS14335;Name=cbl;gbkey=Gene;gene=cbl;gene_biotype=protein_coding;locus_tag=AB25_RS14335;old_locus_tag=AB25_2218 NZ_JJMC01000030.1 Protein Homology CDS 76590 77540 . - 0 ID=cds-WP_001011017.1;Parent=gene-AB25_RS14335;Dbxref=GenBank:WP_001011017.1;Name=WP_001011017.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cbl;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416492.1;locus_tag=AB25_RS14335;product=HTH-type transcriptional regulator Cbl;protein_id=WP_001011017.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 77642 78559 . - . ID=gene-AB25_RS14330;Name=nac;gbkey=Gene;gene=nac;gene_biotype=protein_coding;locus_tag=AB25_RS14330;old_locus_tag=AB25_2219 NZ_JJMC01000030.1 Protein Homology CDS 77642 78559 . - 0 ID=cds-WP_032170832.1;Parent=gene-AB25_RS14330;Dbxref=GenBank:WP_032170832.1;Name=WP_032170832.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nac;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310811.1;locus_tag=AB25_RS14330;product=nitrogen assimilation transcriptional regulator NAC;protein_id=WP_032170832.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 78885 78960 . + . ID=gene-AB25_RS14325;Name=AB25_RS14325;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS14325;old_locus_tag=AB25_2221 NZ_JJMC01000030.1 tRNAscan-SE tRNA 78885 78960 . + . ID=rna-AB25_RS14325;Parent=gene-AB25_RS14325;anticodon=(pos:78918..78920);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS14325;product=tRNA-Asn NZ_JJMC01000030.1 tRNAscan-SE exon 78885 78960 . + . ID=exon-AB25_RS14325-1;Parent=rna-AB25_RS14325;anticodon=(pos:78918..78920);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS14325;product=tRNA-Asn NZ_JJMC01000030.1 RefSeq gene 79016 79951 . - . ID=gene-AB25_RS14320;Name=ldtA;gbkey=Gene;gene=ldtA;gene_biotype=protein_coding;locus_tag=AB25_RS14320;old_locus_tag=AB25_2222 NZ_JJMC01000030.1 Protein Homology CDS 79016 79951 . - 0 ID=cds-WP_000986331.1;Parent=gene-AB25_RS14320;Dbxref=GenBank:WP_000986331.1;Name=WP_000986331.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310812.2;locus_tag=AB25_RS14320;product=L%2CD-transpeptidase;protein_id=WP_000986331.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 80013 81092 . - . ID=gene-AB25_RS14315;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=AB25_RS14315;old_locus_tag=AB25_2223 NZ_JJMC01000030.1 Protein Homology CDS 80013 81092 . - 0 ID=cds-WP_001193786.1;Parent=gene-AB25_RS14315;Dbxref=GenBank:WP_001193786.1;Name=WP_001193786.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310813.1;locus_tag=AB25_RS14315;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_001193786.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 81104 81847 . - . ID=gene-AB25_RS14310;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=AB25_RS14310;old_locus_tag=AB25_2224 NZ_JJMC01000030.1 Protein Homology CDS 81104 81847 . - 0 ID=cds-WP_032170834.1;Parent=gene-AB25_RS14310;Dbxref=GenBank:WP_032170834.1;Name=WP_032170834.1;Ontology_term=GO:0009236,GO:0008818,GO:0051073;gbkey=CDS;gene=cobS;go_function=cobalamin 5'-phosphate synthase activity|0008818||IEA,adenosylcobinamide-GDP ribazoletransferase activity|0051073||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310814.1;locus_tag=AB25_RS14310;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WP_032170834.1;transl_table=11 NZ_JJMC01000030.1 RefSeq gene 81844 82389 . - . ID=gene-AB25_RS14305;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=AB25_RS14305;old_locus_tag=AB25_2225 NZ_JJMC01000030.1 Protein Homology CDS 81844 82389 . - 0 ID=cds-WP_000973169.1;Parent=gene-AB25_RS14305;Dbxref=GenBank:WP_000973169.1;Name=WP_000973169.1;Ontology_term=GO:0009236,GO:0000166,GO:0043752;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416497.1;locus_tag=AB25_RS14305;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WP_000973169.1;transl_table=11 NZ_JJMC01000030.1 RefSeq pseudogene 82523 82684 . - . ID=gene-AB25_RS32420;Name=AB25_RS32420;end_range=82684,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32420;old_locus_tag=AB25_2226;partial=true;pseudo=true NZ_JJMC01000030.1 Protein Homology CDS 82523 82684 . - 0 ID=cds-AB25_RS32420;Parent=gene-AB25_RS32420;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=82684,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524956.1;locus_tag=AB25_RS32420;partial=true;product=cobalamin biosynthesis protein;pseudo=true;transl_table=11 NZ_JJMC01000030.1 RefSeq pseudogene 82693 82881 . - . ID=gene-AB25_RS32425;Name=AB25_RS32425;end_range=82881,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32425;partial=true;pseudo=true;start_range=.,82693 NZ_JJMC01000030.1 Protein Homology CDS 82693 82881 . - 0 ID=cds-AB25_RS32425;Parent=gene-AB25_RS32425;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=82881,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904641.1;locus_tag=AB25_RS32425;partial=true;product=IS4 family transposase;pseudo=true;start_range=.,82693;transl_table=11 NZ_JJMC01000030.1 RefSeq pseudogene 83766 84806 . - . ID=gene-AB25_RS14290;Name=AB25_RS14290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS14290;old_locus_tag=AB25_2228;partial=true;pseudo=true;start_range=.,83766 NZ_JJMC01000030.1 Protein Homology CDS 83766 84806 . - 0 ID=cds-AB25_RS14290;Parent=gene-AB25_RS14290;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB25_RS14290;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,83766;transl_table=11 ##sequence-region NZ_JJMC01000031.1 1 3921 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000031.1 RefSeq region 1 3921 . + . ID=NZ_JJMC01000031.1:1..3921;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000031.1 RefSeq gene 1 972 . - . ID=gene-AB25_RS14280;Name=AB25_RS14280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS14280;old_locus_tag=AB25_2230;partial=true;start_range=.,1 NZ_JJMC01000031.1 Protein Homology CDS 1 972 . - 0 ID=cds-WP_032295907.1-2;Parent=gene-AB25_RS14280;Dbxref=GenBank:WP_032295907.1;Name=WP_032295907.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AB25_RS14280;partial=true;product=IS5-like element IS5 family transposase;protein_id=WP_032295907.1;start_range=.,1;transl_table=11 NZ_JJMC01000031.1 RefSeq pseudogene 1046 1168 . + . ID=gene-AB25_RS32430;Name=AB25_RS32430;end_range=1168,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32430;partial=true;pseudo=true;start_range=.,1046 NZ_JJMC01000031.1 Protein Homology CDS 1046 1168 . + 0 ID=cds-AB25_RS32430;Parent=gene-AB25_RS32430;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1168,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001362728.1;locus_tag=AB25_RS32430;partial=true;product=transposase;pseudo=true;start_range=.,1046;transl_table=11 NZ_JJMC01000031.1 RefSeq pseudogene 1195 1674 . - . ID=gene-AB25_RS14275;Name=AB25_RS14275;end_range=1674,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS14275;old_locus_tag=AB25_2232;partial=true;pseudo=true NZ_JJMC01000031.1 Protein Homology CDS 1195 1674 . - 0 ID=cds-AB25_RS14275;Parent=gene-AB25_RS14275;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=1674,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AB25_RS14275;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_JJMC01000031.1 RefSeq gene 1758 3266 . - . ID=gene-AB25_RS14270;Name=ltrA;gbkey=Gene;gene=ltrA;gene_biotype=protein_coding;locus_tag=AB25_RS14270;old_locus_tag=AB25_2233 NZ_JJMC01000031.1 Protein Homology CDS 1758 3266 . - 0 ID=cds-WP_001189123.1;Parent=gene-AB25_RS14270;Dbxref=GenBank:WP_001189123.1;Name=WP_001189123.1;Ontology_term=GO:0000373,GO:0003964;gbkey=CDS;gene=ltrA;go_function=RNA-directed DNA polymerase activity|0003964||IEA;go_process=Group II intron splicing|0000373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708749.1;locus_tag=AB25_RS14270;product=group II intron reverse transcriptase/maturase;protein_id=WP_001189123.1;transl_table=11 NZ_JJMC01000031.1 RefSeq gene 3695 3921 . + . ID=gene-AB25_RS31985;Name=AB25_RS31985;end_range=3921,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31985;partial=true NZ_JJMC01000031.1 GeneMarkS-2+ CDS 3695 3921 . + 0 ID=cds-WP_279294772.1;Parent=gene-AB25_RS31985;Dbxref=GenBank:WP_279294772.1;Name=WP_279294772.1;end_range=3921,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB25_RS31985;partial=true;product=hypothetical protein;protein_id=WP_279294772.1;transl_table=11 ##sequence-region NZ_JJMC01000032.1 1 2753 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000032.1 RefSeq region 1 2753 . + . ID=NZ_JJMC01000032.1:1..2753;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000032.1 RefSeq pseudogene 1 87 . + . ID=gene-AB25_RS32435;Name=AB25_RS32435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32435;partial=true;pseudo=true;start_range=.,1 NZ_JJMC01000032.1 Protein Homology CDS 1 87 . + 0 ID=cds-AB25_RS32435;Parent=gene-AB25_RS32435;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001362728.1;locus_tag=AB25_RS32435;partial=true;product=IS66-like element accessory protein TnpA;pseudo=true;start_range=.,1;transl_table=11 NZ_JJMC01000032.1 RefSeq gene 84 434 . + . ID=gene-AB25_RS14265;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AB25_RS14265;old_locus_tag=AB25_2235 NZ_JJMC01000032.1 Protein Homology CDS 84 434 . + 0 ID=cds-WP_000624729.1;Parent=gene-AB25_RS14265;Dbxref=GenBank:WP_000624729.1;Name=WP_000624729.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311895.1;locus_tag=AB25_RS14265;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000624729.1;transl_table=11 NZ_JJMC01000032.1 RefSeq pseudogene 465 2080 . + . ID=gene-AB25_RS14260;Name=AB25_RS14260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS14260;old_locus_tag=AB25_2236;pseudo=true NZ_JJMC01000032.1 Protein Homology CDS 465 2080 . + 0 ID=cds-AB25_RS14260;Parent=gene-AB25_RS14260;Note=frameshifted;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080172.1;locus_tag=AB25_RS14260;product=IS66-like element ISEc43 family transposase;pseudo=true;transl_table=11 NZ_JJMC01000032.1 RefSeq gene 2195 2575 . + . ID=gene-AB25_RS14255;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AB25_RS14255;old_locus_tag=AB25_2237 NZ_JJMC01000032.1 Protein Homology CDS 2195 2575 . + 0 ID=cds-WP_001171554.1;Parent=gene-AB25_RS14255;Dbxref=GenBank:WP_001171554.1;Name=WP_001171554.1;gbkey=CDS;gene=tnpA;inference=COORDINATES: protein motif:HMM:NF047595.1;locus_tag=AB25_RS14255;product=IS66-like element accessory protein TnpA;protein_id=WP_001171554.1;transl_table=11 NZ_JJMC01000032.1 RefSeq gene 2572 2753 . + . ID=gene-AB25_RS14250;Name=tnpB;end_range=2753,.;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AB25_RS14250;old_locus_tag=AB25_2238;partial=true NZ_JJMC01000032.1 Protein Homology CDS 2572 2753 . + 0 ID=cds-WP_032261405.1;Parent=gene-AB25_RS14250;Dbxref=GenBank:WP_032261405.1;Name=WP_032261405.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;end_range=2753,.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536669.1;locus_tag=AB25_RS14250;partial=true;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_032261405.1;transl_table=11 ##sequence-region NZ_JJMC01000033.1 1 6748 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000033.1 RefSeq region 1 6748 . + . ID=NZ_JJMC01000033.1:1..6748;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000033.1 RefSeq pseudogene 1 945 . - . ID=gene-AB25_RS14245;Name=AB25_RS14245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS14245;old_locus_tag=AB25_2239;partial=true;pseudo=true;start_range=.,1 NZ_JJMC01000033.1 Protein Homology CDS 1 945 . - 0 ID=cds-AB25_RS14245;Parent=gene-AB25_RS14245;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB25_RS14245;partial=true;product=IS3-like element IS3 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJMC01000033.1 RefSeq pseudogene 1011 1862 . + . ID=gene-AB25_RS14235;Name=AB25_RS14235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS14235;old_locus_tag=AB25_2241;partial=true;pseudo=true;start_range=.,1011 NZ_JJMC01000033.1 Protein Homology CDS 1011 1862 . + 0 ID=cds-AB25_RS14235;Parent=gene-AB25_RS14235;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462451.1;locus_tag=AB25_RS14235;partial=true;product=phosphotriesterase-related protein;pseudo=true;start_range=.,1011;transl_table=11 NZ_JJMC01000033.1 RefSeq pseudogene 1902 2185 . - . ID=gene-AB25_RS28320;Name=AB25_RS28320;end_range=2185,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS28320;partial=true;pseudo=true NZ_JJMC01000033.1 Protein Homology CDS 1902 2185 . - 0 ID=cds-AB25_RS28320;Parent=gene-AB25_RS28320;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2185,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709217.2;locus_tag=AB25_RS28320;partial=true;product=gamma-glutamyltransferase;pseudo=true;transl_table=11 NZ_JJMC01000033.1 RefSeq pseudogene 2274 3895 . - . ID=gene-AB25_RS28330;Name=AB25_RS28330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS28330;pseudo=true NZ_JJMC01000033.1 Protein Homology CDS 2274 3895 . - 0 ID=cds-AB25_RS28330;Parent=gene-AB25_RS28330;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001368704.1;locus_tag=AB25_RS28330;product=ISL3 family transposase;pseudo=true;transl_table=11 NZ_JJMC01000033.1 RefSeq gene 4179 4589 . - . ID=gene-AB25_RS14220;Name=AB25_RS14220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS14220;old_locus_tag=AB25_2246 NZ_JJMC01000033.1 Protein Homology CDS 4179 4589 . - 0 ID=cds-WP_001221604.1;Parent=gene-AB25_RS14220;Dbxref=GenBank:WP_001221604.1;Name=WP_001221604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238421.1;locus_tag=AB25_RS14220;product=zinc-ribbon domain-containing protein;protein_id=WP_001221604.1;transl_table=11 NZ_JJMC01000033.1 RefSeq pseudogene 4775 5742 . + . ID=gene-AB25_RS31130;Name=AB25_RS31130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS31130;pseudo=true NZ_JJMC01000033.1 Protein Homology CDS 4775 5742 . + 0 ID=cds-AB25_RS31130;Parent=gene-AB25_RS31130;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_079827324.1;locus_tag=AB25_RS31130;product=IS110 family transposase;pseudo=true;transl_table=11 NZ_JJMC01000033.1 RefSeq gene 5752 6144 . - . ID=gene-AB25_RS0125415;Name=AB25_RS0125415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0125415 NZ_JJMC01000033.1 Protein Homology CDS 5752 6144 . - 0 ID=cds-WP_000271005.1;Parent=gene-AB25_RS0125415;Dbxref=GenBank:WP_000271005.1;Name=WP_000271005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000271005.1;locus_tag=AB25_RS0125415;product=putative zinc ribbon protein;protein_id=WP_000271005.1;transl_table=11 NZ_JJMC01000033.1 RefSeq gene 6310 6748 . - . ID=gene-AB25_RS14210;Name=AB25_RS14210;end_range=6748,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS14210;old_locus_tag=AB25_2249;partial=true NZ_JJMC01000033.1 Protein Homology CDS 6310 6748 . - 1 ID=cds-WP_032295994.1;Parent=gene-AB25_RS14210;Dbxref=GenBank:WP_032295994.1;Name=WP_032295994.1;end_range=6748,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020238748.1;locus_tag=AB25_RS14210;partial=true;product=inovirus Gp2 family protein;protein_id=WP_032295994.1;transl_table=11 ##sequence-region NZ_JJMC01000034.1 1 9953 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000034.1 RefSeq region 1 9953 . + . ID=NZ_JJMC01000034.1:1..9953;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000034.1 RefSeq gene 62 1084 . + . ID=gene-AB25_RS14205;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=AB25_RS14205;old_locus_tag=AB25_2250 NZ_JJMC01000034.1 Protein Homology CDS 62 1084 . + 0 ID=cds-WP_032215751.1;Parent=gene-AB25_RS14205;Dbxref=GenBank:WP_032215751.1;Name=WP_032215751.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=AB25_RS14205;product=IS21-like element IS100 family transposase;protein_id=WP_032215751.1;transl_table=11 NZ_JJMC01000034.1 RefSeq gene 1081 1863 . + . ID=gene-AB25_RS14200;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=AB25_RS14200;old_locus_tag=AB25_2251 NZ_JJMC01000034.1 Protein Homology CDS 1081 1863 . + 0 ID=cds-WP_077754742.1;Parent=gene-AB25_RS14200;Dbxref=GenBank:WP_077754742.1;Name=WP_077754742.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=AB25_RS14200;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_077754742.1;transl_table=11 NZ_JJMC01000034.1 RefSeq pseudogene 1916 2179 . - . ID=gene-AB25_RS14195;Name=AB25_RS14195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS14195;old_locus_tag=AB25_2252;partial=true;pseudo=true;start_range=.,1916 NZ_JJMC01000034.1 Protein Homology CDS 1916 2179 . - 0 ID=cds-AB25_RS14195;Parent=gene-AB25_RS14195;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AB25_RS14195;partial=true;product=transposase;pseudo=true;start_range=.,1916;transl_table=11 NZ_JJMC01000034.1 RefSeq pseudogene 2226 2672 . - . ID=gene-AB25_RS14190;Name=AB25_RS14190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS14190;old_locus_tag=AB25_2253;partial=true;pseudo=true;start_range=.,2226 NZ_JJMC01000034.1 Protein Homology CDS 2226 2672 . - 0 ID=cds-AB25_RS14190;Parent=gene-AB25_RS14190;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000555401.1;locus_tag=AB25_RS14190;partial=true;product=IS110 family transposase;pseudo=true;start_range=.,2226;transl_table=11 NZ_JJMC01000034.1 RefSeq pseudogene 2736 2921 . + . ID=gene-AB25_RS14185;Name=AB25_RS14185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS14185;old_locus_tag=AB25_2254;partial=true;pseudo=true;start_range=.,2736 NZ_JJMC01000034.1 Protein Homology CDS 2736 2921 . + 0 ID=cds-AB25_RS14185;Parent=gene-AB25_RS14185;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080164.1;locus_tag=AB25_RS14185;partial=true;product=transposase domain-containing protein;pseudo=true;start_range=.,2736;transl_table=11 NZ_JJMC01000034.1 RefSeq gene 3114 3683 . - . ID=gene-AB25_RS14180;Name=AB25_RS14180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS14180;old_locus_tag=AB25_2255 NZ_JJMC01000034.1 Protein Homology CDS 3114 3683 . - 0 ID=cds-WP_032170865.1;Parent=gene-AB25_RS14180;Dbxref=GenBank:WP_032170865.1;Name=WP_032170865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000221568.1;locus_tag=AB25_RS14180;product=inovirus Gp2 family protein;protein_id=WP_032170865.1;transl_table=11 NZ_JJMC01000034.1 RefSeq gene 3887 4084 . + . ID=gene-AB25_RS32440;Name=AB25_RS32440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32440;old_locus_tag=AB25_2256 NZ_JJMC01000034.1 Protein Homology CDS 3887 4084 . + 0 ID=cds-WP_001545803.1;Parent=gene-AB25_RS32440;Dbxref=GenBank:WP_001545803.1;Name=WP_001545803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000236763.1;locus_tag=AB25_RS32440;product=hypothetical protein;protein_id=WP_001545803.1;transl_table=11 NZ_JJMC01000034.1 RefSeq gene 4427 4639 . - . ID=gene-AB25_RS14175;Name=hha;gbkey=Gene;gene=hha;gene_biotype=protein_coding;locus_tag=AB25_RS14175;old_locus_tag=AB25_2257 NZ_JJMC01000034.1 Protein Homology CDS 4427 4639 . - 0 ID=cds-WP_000453334.1;Parent=gene-AB25_RS14175;Dbxref=GenBank:WP_000453334.1;Name=WP_000453334.1;gbkey=CDS;gene=hha;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000453334.1;locus_tag=AB25_RS14175;product=hemolysin expression modulator Hha;protein_id=WP_000453334.1;transl_table=11 NZ_JJMC01000034.1 RefSeq gene 5347 5553 . + . ID=gene-AB25_RS30330;Name=AB25_RS30330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS30330;old_locus_tag=AB25_2259 NZ_JJMC01000034.1 Protein Homology CDS 5347 5553 . + 0 ID=cds-WP_000211310.1;Parent=gene-AB25_RS30330;Dbxref=GenBank:WP_000211310.1;Name=WP_000211310.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001564245.1;locus_tag=AB25_RS30330;product=helix-turn-helix transcriptional regulator;protein_id=WP_000211310.1;transl_table=11 NZ_JJMC01000034.1 RefSeq gene 5648 6250 . + . ID=gene-AB25_RS14165;Name=AB25_RS14165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS14165;old_locus_tag=AB25_2260 NZ_JJMC01000034.1 Protein Homology CDS 5648 6250 . + 0 ID=cds-WP_001387788.1;Parent=gene-AB25_RS14165;Dbxref=GenBank:WP_001387788.1;Name=WP_001387788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001546339.1;locus_tag=AB25_RS14165;product=hypothetical protein;protein_id=WP_001387788.1;transl_table=11 NZ_JJMC01000034.1 RefSeq pseudogene 6887 7266 . + . ID=gene-AB25_RS28355;Name=AB25_RS28355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS28355;partial=true;pseudo=true;start_range=.,6887 NZ_JJMC01000034.1 Protein Homology CDS 6887 7266 . + 0 ID=cds-AB25_RS28355;Parent=gene-AB25_RS28355;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750026.1;locus_tag=AB25_RS28355;partial=true;product=ATP-binding protein;pseudo=true;start_range=.,6887;transl_table=11 NZ_JJMC01000034.1 RefSeq gene 8838 9497 . + . ID=gene-AB25_RS14155;Name=AB25_RS14155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS14155;old_locus_tag=AB25_2264 NZ_JJMC01000034.1 Protein Homology CDS 8838 9497 . + 0 ID=cds-WP_032170868.1;Parent=gene-AB25_RS14155;Dbxref=GenBank:WP_032170868.1;Name=WP_032170868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000241626.1;locus_tag=AB25_RS14155;product=hypothetical protein;protein_id=WP_032170868.1;transl_table=11 NZ_JJMC01000034.1 RefSeq pseudogene 9808 9953 . + . ID=gene-AB25_RS31990;Name=AB25_RS31990;end_range=9953,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS31990;old_locus_tag=AB25_2266;partial=true;pseudo=true NZ_JJMC01000034.1 Protein Homology CDS 9808 9953 . + 0 ID=cds-AB25_RS31990;Parent=gene-AB25_RS31990;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=9953,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309422.1;locus_tag=AB25_RS31990;partial=true;product=GTPase family protein;pseudo=true;transl_table=11 ##sequence-region NZ_JJMC01000035.1 1 7013 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000035.1 RefSeq region 1 7013 . + . ID=NZ_JJMC01000035.1:1..7013;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000035.1 RefSeq gene 1 169 . - . ID=gene-AB25_RS28360;Name=AB25_RS28360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS28360;old_locus_tag=AB25_2267;partial=true;start_range=.,1 NZ_JJMC01000035.1 Protein Homology CDS 1 169 . - 0 ID=cds-WP_032179879.1;Parent=gene-AB25_RS28360;Dbxref=GenBank:WP_032179879.1;Name=WP_032179879.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013677.6;locus_tag=AB25_RS28360;partial=true;product=transposase;protein_id=WP_032179879.1;start_range=.,1;transl_table=11 NZ_JJMC01000035.1 RefSeq gene 524 958 . - . ID=gene-AB25_RS14140;Name=AB25_RS14140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS14140;old_locus_tag=AB25_2269 NZ_JJMC01000035.1 Protein Homology CDS 524 958 . - 0 ID=cds-WP_001221615.1;Parent=gene-AB25_RS14140;Dbxref=GenBank:WP_001221615.1;Name=WP_001221615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001556209.1;locus_tag=AB25_RS14140;product=zinc-ribbon domain-containing protein;protein_id=WP_001221615.1;transl_table=11 NZ_JJMC01000035.1 RefSeq gene 946 1347 . - . ID=gene-AB25_RS14135;Name=AB25_RS14135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS14135;old_locus_tag=AB25_2270 NZ_JJMC01000035.1 Protein Homology CDS 946 1347 . - 0 ID=cds-WP_000270962.1;Parent=gene-AB25_RS14135;Dbxref=GenBank:WP_000270962.1;Name=WP_000270962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004020115.1;locus_tag=AB25_RS14135;product=putative zinc ribbon protein;protein_id=WP_000270962.1;transl_table=11 NZ_JJMC01000035.1 RefSeq gene 1607 2176 . - . ID=gene-AB25_RS14130;Name=AB25_RS14130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS14130;old_locus_tag=AB25_2271 NZ_JJMC01000035.1 Protein Homology CDS 1607 2176 . - 0 ID=cds-WP_000221515.1;Parent=gene-AB25_RS14130;Dbxref=GenBank:WP_000221515.1;Name=WP_000221515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000221568.1;locus_tag=AB25_RS14130;product=inovirus Gp2 family protein;protein_id=WP_000221515.1;transl_table=11 NZ_JJMC01000035.1 RefSeq pseudogene 2352 2548 . + . ID=gene-AB25_RS32445;Name=AB25_RS32445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32445;old_locus_tag=AB25_2272;pseudo=true NZ_JJMC01000035.1 Protein Homology CDS 2352 2548 . + 0 ID=cds-AB25_RS32445;Parent=gene-AB25_RS32445;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001547002.1;locus_tag=AB25_RS32445;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJMC01000035.1 RefSeq gene 2892 3068 . - . ID=gene-AB25_RS14125;Name=AB25_RS14125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS14125;old_locus_tag=AB25_2273 NZ_JJMC01000035.1 Protein Homology CDS 2892 3068 . - 0 ID=cds-WP_001344112.1;Parent=gene-AB25_RS14125;Dbxref=GenBank:WP_001344112.1;Name=WP_001344112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015704109.1;locus_tag=AB25_RS14125;product=Hha/YmoA family nucleoid-associated regulatory protein;protein_id=WP_001344112.1;transl_table=11 NZ_JJMC01000035.1 RefSeq gene 3369 3635 . - . ID=gene-AB25_RS0125435;Name=AB25_RS0125435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0125435 NZ_JJMC01000035.1 Protein Homology CDS 3369 3635 . - 0 ID=cds-WP_000840364.1;Parent=gene-AB25_RS0125435;Dbxref=GenBank:WP_000840364.1;Name=WP_000840364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000840368.1;locus_tag=AB25_RS0125435;product=hypothetical protein;protein_id=WP_000840364.1;transl_table=11 NZ_JJMC01000035.1 RefSeq pseudogene 4543 5465 . + . ID=gene-AB25_RS14120;Name=AB25_RS14120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS14120;old_locus_tag=AB25_2276;pseudo=true NZ_JJMC01000035.1 Protein Homology CDS 4543 5465 . + 0 ID=cds-AB25_RS14120;Parent=gene-AB25_RS14120;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016230784.1;locus_tag=AB25_RS14120;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJMC01000035.1 RefSeq gene 5550 6422 . + . ID=gene-AB25_RS14115;Name=AB25_RS14115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS14115;old_locus_tag=AB25_2277 NZ_JJMC01000035.1 Protein Homology CDS 5550 6422 . + 0 ID=cds-WP_032295997.1;Parent=gene-AB25_RS14115;Dbxref=GenBank:WP_032295997.1;Name=WP_032295997.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309422.1;locus_tag=AB25_RS14115;product=GTPase family protein;protein_id=WP_032295997.1;transl_table=11 NZ_JJMC01000035.1 RefSeq pseudogene 6427 6963 . + . ID=gene-AB25_RS31720;Name=AB25_RS31720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS31720;old_locus_tag=AB25_2278;partial=true;pseudo=true;start_range=.,6427 NZ_JJMC01000035.1 Protein Homology CDS 6427 6963 . + 0 ID=cds-AB25_RS31720;Parent=gene-AB25_RS31720;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309423.1;locus_tag=AB25_RS31720;partial=true;product=antirestriction protein;pseudo=true;start_range=.,6427;transl_table=11 ##sequence-region NZ_JJMC01000036.1 1 1777 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000036.1 RefSeq region 1 1777 . + . ID=NZ_JJMC01000036.1:1..1777;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000036.1 RefSeq gene 149 1777 . + . ID=gene-AB25_RS14110;Name=AB25_RS14110;end_range=1777,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS14110;old_locus_tag=AB25_2279;partial=true NZ_JJMC01000036.1 Protein Homology CDS 149 1777 . + 0 ID=cds-WP_032295999.1;Parent=gene-AB25_RS14110;Dbxref=GenBank:WP_032295999.1;Name=WP_032295999.1;end_range=1777,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309423.1;locus_tag=AB25_RS14110;partial=true;product=AIDA repeat-containing protein;protein_id=WP_032295999.1;transl_table=11 ##sequence-region NZ_JJMC01000037.1 1 4622 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000037.1 RefSeq region 1 4622 . + . ID=NZ_JJMC01000037.1:1..4622;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000037.1 RefSeq gene 1 400 . - . ID=gene-AB25_RS14105;Name=AB25_RS14105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS14105;old_locus_tag=AB25_2280;partial=true;start_range=.,1 NZ_JJMC01000037.1 Protein Homology CDS 1 400 . - 0 ID=cds-WP_023156734.1;Parent=gene-AB25_RS14105;Dbxref=GenBank:WP_023156734.1;Name=WP_023156734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000221568.1;locus_tag=AB25_RS14105;partial=true;product=inovirus Gp2 family protein;protein_id=WP_023156734.1;start_range=.,1;transl_table=11 NZ_JJMC01000037.1 RefSeq gene 600 800 . + . ID=gene-AB25_RS32450;Name=AB25_RS32450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32450;old_locus_tag=AB25_2281 NZ_JJMC01000037.1 Protein Homology CDS 600 800 . + 0 ID=cds-WP_001297900.1;Parent=gene-AB25_RS32450;Dbxref=GenBank:WP_001297900.1;Name=WP_001297900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001297900.1;locus_tag=AB25_RS32450;product=hypothetical protein;protein_id=WP_001297900.1;transl_table=11 NZ_JJMC01000037.1 RefSeq gene 1014 1181 . - . ID=gene-AB25_RS32820;Name=AB25_RS32820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32820 NZ_JJMC01000037.1 Protein Homology CDS 1014 1181 . - 0 ID=cds-WP_001322502.1;Parent=gene-AB25_RS32820;Dbxref=GenBank:WP_001322502.1;Name=WP_001322502.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017162.6;locus_tag=AB25_RS32820;product=hypothetical protein;protein_id=WP_001322502.1;transl_table=11 NZ_JJMC01000037.1 RefSeq pseudogene 1915 2100 . + . ID=gene-AB25_RS14095;Name=AB25_RS14095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS14095;old_locus_tag=AB25_2282;partial=true;pseudo=true;start_range=.,1915 NZ_JJMC01000037.1 Protein Homology CDS 1915 2100 . + 0 ID=cds-AB25_RS14095;Parent=gene-AB25_RS14095;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309429.1;locus_tag=AB25_RS14095;partial=true;product=antirestriction protein;pseudo=true;start_range=.,1915;transl_table=11 NZ_JJMC01000037.1 RefSeq gene 2116 2592 . + . ID=gene-AB25_RS14090;Name=AB25_RS14090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS14090;old_locus_tag=AB25_2283 NZ_JJMC01000037.1 Protein Homology CDS 2116 2592 . + 0 ID=cds-WP_021543855.1;Parent=gene-AB25_RS14090;Dbxref=GenBank:WP_021543855.1;Name=WP_021543855.1;Ontology_term=GO:0006508,GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310830.1;locus_tag=AB25_RS14090;product=JAB domain-containing protein;protein_id=WP_021543855.1;transl_table=11 NZ_JJMC01000037.1 RefSeq gene 2655 2876 . + . ID=gene-AB25_RS14085;Name=AB25_RS14085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS14085;old_locus_tag=AB25_2284 NZ_JJMC01000037.1 Protein Homology CDS 2655 2876 . + 0 ID=cds-WP_000692345.1;Parent=gene-AB25_RS14085;Dbxref=GenBank:WP_000692345.1;Name=WP_000692345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309431.1;locus_tag=AB25_RS14085;product=DUF987 domain-containing protein;protein_id=WP_000692345.1;transl_table=11 NZ_JJMC01000037.1 RefSeq gene 3039 3407 . + . ID=gene-AB25_RS0125460;Name=AB25_RS0125460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0125460;old_locus_tag=AB25_2286 NZ_JJMC01000037.1 Protein Homology CDS 3039 3407 . + 0 ID=cds-WP_001295723.1;Parent=gene-AB25_RS0125460;Dbxref=GenBank:WP_001295723.1;Name=WP_001295723.1;Ontology_term=GO:0051495;gbkey=CDS;go_process=positive regulation of cytoskeleton organization|0051495||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280950.1;locus_tag=AB25_RS0125460;product=type IV toxin-antitoxin system YeeU family antitoxin;protein_id=WP_001295723.1;transl_table=11 NZ_JJMC01000037.1 RefSeq gene 3497 3871 . + . ID=gene-AB25_RS14075;Name=AB25_RS14075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS14075;old_locus_tag=AB25_2287 NZ_JJMC01000037.1 Protein Homology CDS 3497 3871 . + 0 ID=cds-WP_000854762.1;Parent=gene-AB25_RS14075;Dbxref=GenBank:WP_000854762.1;Name=WP_000854762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309433.1;locus_tag=AB25_RS14075;product=TA system toxin CbtA family protein;protein_id=WP_000854762.1;transl_table=11 NZ_JJMC01000037.1 RefSeq gene 3871 4074 . + . ID=gene-AB25_RS14070;Name=AB25_RS14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS14070;old_locus_tag=AB25_2288 NZ_JJMC01000037.1 Protein Homology CDS 3871 4074 . + 0 ID=cds-WP_001398797.1;Parent=gene-AB25_RS14070;Dbxref=GenBank:WP_001398797.1;Name=WP_001398797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310834.2;locus_tag=AB25_RS14070;product=DUF5983 family protein;protein_id=WP_001398797.1;transl_table=11 NZ_JJMC01000037.1 RefSeq pseudogene 4108 4200 . + . ID=gene-AB25_RS31150;Name=AB25_RS31150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS31150;partial=true;pseudo=true;start_range=.,4108 NZ_JJMC01000037.1 Protein Homology CDS 4108 4200 . + 0 ID=cds-AB25_RS31150;Parent=gene-AB25_RS31150;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309435.1;locus_tag=AB25_RS31150;partial=true;product=DUF957 domain-containing protein;pseudo=true;start_range=.,4108;transl_table=11 NZ_JJMC01000037.1 RefSeq pseudogene 4307 4622 . - . ID=gene-AB25_RS14065;Name=AB25_RS14065;end_range=4622,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS14065;old_locus_tag=AB25_2290;partial=true;pseudo=true;start_range=.,4307 NZ_JJMC01000037.1 Protein Homology CDS 4307 4622 . - 1 ID=cds-AB25_RS14065;Parent=gene-AB25_RS14065;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4622,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000998048.1;locus_tag=AB25_RS14065;partial=true;product=IS66 family transposase;pseudo=true;start_range=.,4307;transl_table=11 ##sequence-region NZ_JJMC01000038.1 1 24216 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000038.1 RefSeq region 1 24216 . + . ID=NZ_JJMC01000038.1:1..24216;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000038.1 RefSeq gene 62 1084 . + . ID=gene-AB25_RS14060;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=AB25_RS14060;old_locus_tag=AB25_2291 NZ_JJMC01000038.1 Protein Homology CDS 62 1084 . + 0 ID=cds-WP_032215751.1-2;Parent=gene-AB25_RS14060;Dbxref=GenBank:WP_032215751.1;Name=WP_032215751.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=AB25_RS14060;product=IS21-like element IS100 family transposase;protein_id=WP_032215751.1;transl_table=11 NZ_JJMC01000038.1 RefSeq gene 1081 1863 . + . ID=gene-AB25_RS14055;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=AB25_RS14055;old_locus_tag=AB25_2292 NZ_JJMC01000038.1 Protein Homology CDS 1081 1863 . + 0 ID=cds-WP_077754671.1;Parent=gene-AB25_RS14055;Dbxref=GenBank:WP_077754671.1;Name=WP_077754671.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=AB25_RS14055;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_077754671.1;transl_table=11 NZ_JJMC01000038.1 RefSeq gene 1954 2319 . + . ID=gene-AB25_RS31730;Name=AB25_RS31730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31730 NZ_JJMC01000038.1 Protein Homology CDS 1954 2319 . + 0 ID=cds-WP_001280452.1;Parent=gene-AB25_RS31730;Dbxref=GenBank:WP_001280452.1;Name=WP_001280452.1;Ontology_term=GO:0006576,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=biogenic amine metabolic process|0006576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280452.1;locus_tag=AB25_RS31730;product=EutP/PduV family microcompartment system protein;protein_id=WP_001280452.1;transl_table=11 NZ_JJMC01000038.1 RefSeq gene 2420 2749 . - . ID=gene-AB25_RS14050;Name=tmaR;gbkey=Gene;gene=tmaR;gene_biotype=protein_coding;locus_tag=AB25_RS14050;old_locus_tag=AB25_2293 NZ_JJMC01000038.1 Protein Homology CDS 2420 2749 . - 0 ID=cds-WP_000450409.1;Parent=gene-AB25_RS14050;Dbxref=GenBank:WP_000450409.1;Name=WP_000450409.1;gbkey=CDS;gene=tmaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310836.2;locus_tag=AB25_RS14050;product=DUF496 family protein;protein_id=WP_000450409.1;transl_table=11 NZ_JJMC01000038.1 RefSeq gene 2921 3979 . - . ID=gene-AB25_RS14045;Name=yeeA;gbkey=Gene;gene=yeeA;gene_biotype=protein_coding;locus_tag=AB25_RS14045;old_locus_tag=AB25_2294 NZ_JJMC01000038.1 Protein Homology CDS 2921 3979 . - 0 ID=cds-WP_001200891.1;Parent=gene-AB25_RS14045;Dbxref=GenBank:WP_001200891.1;Name=WP_001200891.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;gene=yeeA;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416512.1;locus_tag=AB25_RS14045;product=FUSC family protein;protein_id=WP_001200891.1;transl_table=11 NZ_JJMC01000038.1 RefSeq gene 4177 4650 . - . ID=gene-AB25_RS14040;Name=sbmC;gbkey=Gene;gene=sbmC;gene_biotype=protein_coding;locus_tag=AB25_RS14040;old_locus_tag=AB25_2295 NZ_JJMC01000038.1 Protein Homology CDS 4177 4650 . - 0 ID=cds-WP_001105378.1;Parent=gene-AB25_RS14040;Dbxref=GenBank:WP_001105378.1;Name=WP_001105378.1;gbkey=CDS;gene=sbmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310838.1;locus_tag=AB25_RS14040;product=DNA gyrase inhibitor SbmC;protein_id=WP_001105378.1;transl_table=11 NZ_JJMC01000038.1 RefSeq gene 4778 5296 . + . ID=gene-AB25_RS14035;Name=AB25_RS14035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS14035;old_locus_tag=AB25_2296 NZ_JJMC01000038.1 Protein Homology CDS 4778 5296 . + 0 ID=cds-WP_000115885.1;Parent=gene-AB25_RS14035;Dbxref=GenBank:WP_000115885.1;Name=WP_000115885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000115885.1;locus_tag=AB25_RS14035;product=ClbS/DfsB family four-helix bundle protein;protein_id=WP_000115885.1;transl_table=11 NZ_JJMC01000038.1 RefSeq pseudogene 5315 6534 . + . ID=gene-AB25_RS0125475;Name=AB25_RS0125475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS0125475;pseudo=true NZ_JJMC01000038.1 Protein Homology CDS 5315 6534 . + 0 ID=cds-AB25_RS0125475;Parent=gene-AB25_RS0125475;Note=frameshifted;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343765.1;locus_tag=AB25_RS0125475;product=ISL3-like element ISEc53 family transposase;pseudo=true;transl_table=11 NZ_JJMC01000038.1 RefSeq gene 6661 7827 . - . ID=gene-AB25_RS14030;Name=dacD;gbkey=Gene;gene=dacD;gene_biotype=protein_coding;locus_tag=AB25_RS14030;old_locus_tag=AB25_2298 NZ_JJMC01000038.1 Protein Homology CDS 6661 7827 . - 0 ID=cds-WP_032170892.1;Parent=gene-AB25_RS14030;Dbxref=GenBank:WP_032170892.1;Name=WP_032170892.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacD;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416514.4;locus_tag=AB25_RS14030;product=serine-type D-Ala-D-Ala carboxypeptidase DacD;protein_id=WP_032170892.1;transl_table=11 NZ_JJMC01000038.1 RefSeq gene 8036 9463 . + . ID=gene-AB25_RS14025;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=AB25_RS14025;old_locus_tag=AB25_2299 NZ_JJMC01000038.1 Protein Homology CDS 8036 9463 . + 0 ID=cds-WP_000980601.1;Parent=gene-AB25_RS14025;Dbxref=GenBank:WP_000980601.1;Name=WP_000980601.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008310;gbkey=CDS;gene=sbcB;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,single-stranded DNA 3'-5' DNA exonuclease activity|0008310||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416515.1;locus_tag=AB25_RS14025;product=exodeoxyribonuclease I;protein_id=WP_000980601.1;transl_table=11 NZ_JJMC01000038.1 RefSeq gene 9506 9733 . - . ID=gene-AB25_RS14020;Name=tsuB;gbkey=Gene;gene=tsuB;gene_biotype=protein_coding;locus_tag=AB25_RS14020;old_locus_tag=AB25_2300 NZ_JJMC01000038.1 Protein Homology CDS 9506 9733 . - 0 ID=cds-WP_000985273.1;Parent=gene-AB25_RS14020;Dbxref=GenBank:WP_000985273.1;Name=WP_000985273.1;gbkey=CDS;gene=tsuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310841.1;locus_tag=AB25_RS14020;product=thiosulfate utilization sulfurtransferase TsuB/YeeD;protein_id=WP_000985273.1;transl_table=11 NZ_JJMC01000038.1 RefSeq gene 9747 10805 . - . ID=gene-AB25_RS14015;Name=tsuA;gbkey=Gene;gene=tsuA;gene_biotype=protein_coding;locus_tag=AB25_RS14015;old_locus_tag=AB25_2301 NZ_JJMC01000038.1 Protein Homology CDS 9747 10805 . - 0 ID=cds-WP_032170895.1;Parent=gene-AB25_RS14015;Dbxref=GenBank:WP_032170895.1;Name=WP_032170895.1;gbkey=CDS;gene=tsuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416517.1;locus_tag=AB25_RS14015;product=thiosulfate utilization transporter TsuA/YeeE;protein_id=WP_032170895.1;transl_table=11 NZ_JJMC01000038.1 RefSeq gene 10984 12342 . - . ID=gene-AB25_RS14010;Name=plaP;gbkey=Gene;gene=plaP;gene_biotype=protein_coding;locus_tag=AB25_RS14010;old_locus_tag=AB25_2302 NZ_JJMC01000038.1 Protein Homology CDS 10984 12342 . - 0 ID=cds-WP_000019197.1;Parent=gene-AB25_RS14010;Dbxref=GenBank:WP_000019197.1;Name=WP_000019197.1;gbkey=CDS;gene=plaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416518.2;locus_tag=AB25_RS14010;product=putrescine/proton symporter PlaP;protein_id=WP_000019197.1;transl_table=11 NZ_JJMC01000038.1 RefSeq gene 12332 12394 . - . ID=gene-AB25_RS31155;Name=yoeI;gbkey=Gene;gene=yoeI;gene_biotype=protein_coding;locus_tag=AB25_RS31155 NZ_JJMC01000038.1 Protein Homology CDS 12332 12394 . - 0 ID=cds-WP_010723108.1;Parent=gene-AB25_RS31155;Dbxref=GenBank:WP_010723108.1;Name=WP_010723108.1;gbkey=CDS;gene=yoeI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791246.1;locus_tag=AB25_RS31155;product=membrane protein YoeI;protein_id=WP_010723108.1;transl_table=11 NZ_JJMC01000038.1 RefSeq gene 12609 13538 . - . ID=gene-AB25_RS14005;Name=yeeY;gbkey=Gene;gene=yeeY;gene_biotype=protein_coding;locus_tag=AB25_RS14005;old_locus_tag=AB25_2303 NZ_JJMC01000038.1 Protein Homology CDS 12609 13538 . - 0 ID=cds-WP_032170897.1;Parent=gene-AB25_RS14005;Dbxref=GenBank:WP_032170897.1;Name=WP_032170897.1;gbkey=CDS;gene=yeeY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416519.4;locus_tag=AB25_RS14005;product=LysR substrate-binding domain-containing protein;protein_id=WP_032170897.1;transl_table=11 NZ_JJMC01000038.1 RefSeq gene 13584 14408 . - . ID=gene-AB25_RS14000;Name=yeeZ;gbkey=Gene;gene=yeeZ;gene_biotype=protein_coding;locus_tag=AB25_RS14000;old_locus_tag=AB25_2304 NZ_JJMC01000038.1 Protein Homology CDS 13584 14408 . - 0 ID=cds-WP_000754762.1;Parent=gene-AB25_RS14000;Dbxref=GenBank:WP_000754762.1;Name=WP_000754762.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;gene=yeeZ;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310845.1;locus_tag=AB25_RS14000;product=SDR family oxidoreductase;protein_id=WP_000754762.1;transl_table=11 NZ_JJMC01000038.1 RefSeq gene 14491 14745 . - . ID=gene-AB25_RS13995;Name=yoeB;gbkey=Gene;gene=yoeB;gene_biotype=protein_coding;locus_tag=AB25_RS13995;old_locus_tag=AB25_2305 NZ_JJMC01000038.1 Protein Homology CDS 14491 14745 . - 0 ID=cds-WP_000767829.1;Parent=gene-AB25_RS13995;Dbxref=GenBank:WP_000767829.1;Name=WP_000767829.1;gbkey=CDS;gene=yoeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707909.1;locus_tag=AB25_RS13995;product=type II toxin-antitoxin system mRNA interferase toxin YoeB;protein_id=WP_000767829.1;transl_table=11 NZ_JJMC01000038.1 RefSeq gene 14742 14993 . - . ID=gene-AB25_RS13990;Name=yefM;gbkey=Gene;gene=yefM;gene_biotype=protein_coding;locus_tag=AB25_RS13990;old_locus_tag=AB25_2306 NZ_JJMC01000038.1 Protein Homology CDS 14742 14993 . - 0 ID=cds-WP_001259255.1;Parent=gene-AB25_RS13990;Dbxref=GenBank:WP_001259255.1;Name=WP_001259255.1;gbkey=CDS;gene=yefM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416521.2;locus_tag=AB25_RS13990;product=YoeB-YefM toxin-antitoxin system antitoxin YefM;protein_id=WP_001259255.1;transl_table=11 NZ_JJMC01000038.1 RefSeq gene 15276 15326 . + . ID=gene-AB25_RS28410;Name=hisL;gbkey=Gene;gene=hisL;gene_biotype=protein_coding;locus_tag=AB25_RS28410 NZ_JJMC01000038.1 Protein Homology CDS 15276 15326 . + 0 ID=cds-WP_001364200.1;Parent=gene-AB25_RS28410;Dbxref=GenBank:WP_001364200.1;Name=WP_001364200.1;Ontology_term=GO:0000105;gbkey=CDS;gene=hisL;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416522.1;locus_tag=AB25_RS28410;product=his operon leader peptide;protein_id=WP_001364200.1;transl_table=11 NZ_JJMC01000038.1 cmsearch sequence_feature 15302 15425 . + . ID=id-NZ_JJMC01000038.1:15302..15425;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JJMC01000038.1 RefSeq gene 15472 16371 . + . ID=gene-AB25_RS13985;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=AB25_RS13985;old_locus_tag=AB25_2307 NZ_JJMC01000038.1 Protein Homology CDS 15472 16371 . + 0 ID=cds-WP_000131782.1;Parent=gene-AB25_RS13985;Dbxref=GenBank:WP_000131782.1;Name=WP_000131782.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=AB25_RS13985;product=ATP phosphoribosyltransferase;protein_id=WP_000131782.1;transl_table=11 NZ_JJMC01000038.1 RefSeq gene 16377 17675 . + . ID=gene-AB25_RS13980;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=AB25_RS13980;old_locus_tag=AB25_2308 NZ_JJMC01000038.1 Protein Homology CDS 16377 17675 . + 0 ID=cds-WP_001743908.1;Parent=gene-AB25_RS13980;Dbxref=GenBank:WP_001743908.1;Name=WP_001743908.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001456251.1;locus_tag=AB25_RS13980;product=histidinol dehydrogenase;protein_id=WP_001743908.1;transl_table=11 NZ_JJMC01000038.1 RefSeq gene 17678 18748 . + . ID=gene-AB25_RS13975;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=AB25_RS13975;old_locus_tag=AB25_2309 NZ_JJMC01000038.1 Protein Homology CDS 17678 18748 . + 0 ID=cds-WP_000108941.1;Parent=gene-AB25_RS13975;Dbxref=GenBank:WP_000108941.1;Name=WP_000108941.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416525.1;locus_tag=AB25_RS13975;product=histidinol-phosphate transaminase;protein_id=WP_000108941.1;transl_table=11 NZ_JJMC01000038.1 RefSeq gene 18748 19815 . + . ID=gene-AB25_RS13970;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=AB25_RS13970;old_locus_tag=AB25_2310 NZ_JJMC01000038.1 Protein Homology CDS 18748 19815 . + 0 ID=cds-WP_000080085.1;Parent=gene-AB25_RS13970;Dbxref=GenBank:WP_000080085.1;Name=WP_000080085.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707917.2;locus_tag=AB25_RS13970;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_000080085.1;transl_table=11 NZ_JJMC01000038.1 RefSeq gene 19815 20405 . + . ID=gene-AB25_RS13965;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=AB25_RS13965;old_locus_tag=AB25_2311 NZ_JJMC01000038.1 Protein Homology CDS 19815 20405 . + 0 ID=cds-WP_001103560.1;Parent=gene-AB25_RS13965;Dbxref=GenBank:WP_001103560.1;Name=WP_001103560.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128083.1;locus_tag=AB25_RS13965;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_001103560.1;transl_table=11 NZ_JJMC01000038.1 RefSeq gene 20405 21142 . + . ID=gene-AB25_RS13960;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=AB25_RS13960;old_locus_tag=AB25_2312 NZ_JJMC01000038.1 Protein Homology CDS 20405 21142 . + 0 ID=cds-WP_032170900.1;Parent=gene-AB25_RS13960;Dbxref=GenBank:WP_032170900.1;Name=WP_032170900.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310852.2;locus_tag=AB25_RS13960;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_032170900.1;transl_table=11 NZ_JJMC01000038.1 RefSeq gene 21124 21900 . + . ID=gene-AB25_RS13955;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=AB25_RS13955;old_locus_tag=AB25_2313 NZ_JJMC01000038.1 Protein Homology CDS 21124 21900 . + 0 ID=cds-WP_000880155.1;Parent=gene-AB25_RS13955;Dbxref=GenBank:WP_000880155.1;Name=WP_000880155.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310853.1;locus_tag=AB25_RS13955;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_000880155.1;transl_table=11 NZ_JJMC01000038.1 RefSeq gene 21894 22502 . + . ID=gene-AB25_RS13950;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=AB25_RS13950;old_locus_tag=AB25_2314 NZ_JJMC01000038.1 Protein Homology CDS 21894 22502 . + 0 ID=cds-WP_032170902.1;Parent=gene-AB25_RS13950;Dbxref=GenBank:WP_032170902.1;Name=WP_032170902.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774927.1;locus_tag=AB25_RS13950;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_032170902.1;transl_table=11 NZ_JJMC01000038.1 RefSeq pseudogene 22541 23587 . - . ID=gene-AB25_RS0125480;Name=AB25_RS0125480;end_range=23587,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS0125480;old_locus_tag=AB25_2315;partial=true;pseudo=true NZ_JJMC01000038.1 Protein Homology CDS 22541 23587 . - 0 ID=cds-AB25_RS0125480;Parent=gene-AB25_RS0125480;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016757;end_range=23587,.;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004184789.1;locus_tag=AB25_RS0125480;partial=true;product=glycosyltransferase;pseudo=true;transl_table=11 NZ_JJMC01000038.1 RefSeq pseudogene 23640 24216 . + . ID=gene-AB25_RS31160;Name=AB25_RS31160;end_range=24216,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS31160;partial=true;pseudo=true NZ_JJMC01000038.1 Protein Homology CDS 23640 24216 . + 0 ID=cds-AB25_RS31160;Parent=gene-AB25_RS31160;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=24216,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AB25_RS31160;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_JJMC01000038.1 cmsearch sequence_feature 23921 24037 . + . ID=id-AB25_RS31160;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS31160;pseudo=true ##sequence-region NZ_JJMC01000039.1 1 12162 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000039.1 RefSeq region 1 12162 . + . ID=NZ_JJMC01000039.1:1..12162;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000039.1 RefSeq pseudogene 1 697 . - . ID=gene-AB25_RS30355;Name=AB25_RS30355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS30355;partial=true;pseudo=true;start_range=.,1 NZ_JJMC01000039.1 Protein Homology CDS 1 697 . - 0 ID=cds-AB25_RS30355;Parent=gene-AB25_RS30355;Note=programmed frameshift%3B internal stop%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558153.1;locus_tag=AB25_RS30355;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJMC01000039.1 RefSeq gene 784 852 . - . ID=gene-AB25_RS32270;Name=ykiE;gbkey=Gene;gene=ykiE;gene_biotype=protein_coding;locus_tag=AB25_RS32270 NZ_JJMC01000039.1 Protein Homology CDS 784 852 . - 0 ID=cds-WP_211180522.1;Parent=gene-AB25_RS32270;Dbxref=GenBank:WP_211180522.1;Name=WP_211180522.1;gbkey=CDS;gene=ykiE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051215.1;locus_tag=AB25_RS32270;product=protein YkiE;protein_id=WP_211180522.1;transl_table=11 NZ_JJMC01000039.1 RefSeq gene 989 1510 . + . ID=gene-AB25_RS13920;Name=fecI;gbkey=Gene;gene=fecI;gene_biotype=protein_coding;locus_tag=AB25_RS13920;old_locus_tag=AB25_2321 NZ_JJMC01000039.1 Protein Homology CDS 989 1510 . + 0 ID=cds-WP_001283626.1;Parent=gene-AB25_RS13920;Dbxref=GenBank:WP_001283626.1;Name=WP_001283626.1;gbkey=CDS;gene=fecI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418713.1;locus_tag=AB25_RS13920;product=RNA polymerase sigma factor FecI;protein_id=WP_001283626.1;transl_table=11 NZ_JJMC01000039.1 RefSeq gene 1507 2460 . + . ID=gene-AB25_RS13915;Name=fecR;gbkey=Gene;gene=fecR;gene_biotype=protein_coding;locus_tag=AB25_RS13915;old_locus_tag=AB25_2322 NZ_JJMC01000039.1 Protein Homology CDS 1507 2460 . + 0 ID=cds-WP_001393050.1;Parent=gene-AB25_RS13915;Dbxref=GenBank:WP_001393050.1;Name=WP_001393050.1;gbkey=CDS;gene=fecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418712.1;locus_tag=AB25_RS13915;product=ferric citrate uptake sigma factor regulator FecR;protein_id=WP_001393050.1;transl_table=11 NZ_JJMC01000039.1 RefSeq gene 2547 4871 . + . ID=gene-AB25_RS13910;Name=fecA;gbkey=Gene;gene=fecA;gene_biotype=protein_coding;locus_tag=AB25_RS13910;old_locus_tag=AB25_2323 NZ_JJMC01000039.1 Protein Homology CDS 2547 4871 . + 0 ID=cds-WP_000188262.1;Parent=gene-AB25_RS13910;Dbxref=GenBank:WP_000188262.1;Name=WP_000188262.1;gbkey=CDS;gene=fecA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418711.1;locus_tag=AB25_RS13910;product=TonB-dependent Fe(3+) dicitrate receptor FecA;protein_id=WP_000188262.1;transl_table=11 NZ_JJMC01000039.1 RefSeq gene 4916 5818 . + . ID=gene-AB25_RS13905;Name=fecB;gbkey=Gene;gene=fecB;gene_biotype=protein_coding;locus_tag=AB25_RS13905;old_locus_tag=AB25_2324 NZ_JJMC01000039.1 Protein Homology CDS 4916 5818 . + 0 ID=cds-WP_000879164.1;Parent=gene-AB25_RS13905;Dbxref=GenBank:WP_000879164.1;Name=WP_000879164.1;gbkey=CDS;gene=fecB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418710.4;locus_tag=AB25_RS13905;product=Fe(3+) dicitrate ABC transporter substrate-binding protein FecB;protein_id=WP_000879164.1;transl_table=11 NZ_JJMC01000039.1 RefSeq gene 5815 6813 . + . ID=gene-AB25_RS13900;Name=fecC;gbkey=Gene;gene=fecC;gene_biotype=protein_coding;locus_tag=AB25_RS13900;old_locus_tag=AB25_2325 NZ_JJMC01000039.1 Protein Homology CDS 5815 6813 . + 0 ID=cds-WP_000125187.1;Parent=gene-AB25_RS13900;Dbxref=GenBank:WP_000125187.1;Name=WP_000125187.1;gbkey=CDS;gene=fecC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418709.1;locus_tag=AB25_RS13900;product=iron-dicitrate ABC transporter permease FecC;protein_id=WP_000125187.1;transl_table=11 NZ_JJMC01000039.1 RefSeq gene 6810 7766 . + . ID=gene-AB25_RS13895;Name=fecD;gbkey=Gene;gene=fecD;gene_biotype=protein_coding;locus_tag=AB25_RS13895;old_locus_tag=AB25_2326 NZ_JJMC01000039.1 Protein Homology CDS 6810 7766 . + 0 ID=cds-WP_000684856.1;Parent=gene-AB25_RS13895;Dbxref=GenBank:WP_000684856.1;Name=WP_000684856.1;gbkey=CDS;gene=fecD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418708.1;locus_tag=AB25_RS13895;product=Fe(3+) dicitrate ABC transporter permease subunit FecD;protein_id=WP_000684856.1;transl_table=11 NZ_JJMC01000039.1 RefSeq gene 7767 8534 . + . ID=gene-AB25_RS0125490;Name=fecE;gbkey=Gene;gene=fecE;gene_biotype=protein_coding;locus_tag=AB25_RS0125490;old_locus_tag=AB25_2328 NZ_JJMC01000039.1 Protein Homology CDS 7767 8534 . + 0 ID=cds-WP_000175457.1;Parent=gene-AB25_RS0125490;Dbxref=GenBank:WP_000175457.1;Name=WP_000175457.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fecE;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418707.1;locus_tag=AB25_RS0125490;product=Fe(3+) dicitrate ABC transporter ATP-binding protein FecE;protein_id=WP_000175457.1;transl_table=11 NZ_JJMC01000039.1 RefSeq gene 9091 9348 . - . ID=gene-AB25_RS31735;Name=AB25_RS31735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31735 NZ_JJMC01000039.1 GeneMarkS-2+ CDS 9091 9348 . - 0 ID=cds-WP_000177057.1;Parent=gene-AB25_RS31735;Dbxref=GenBank:WP_000177057.1;Name=WP_000177057.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB25_RS31735;product=hypothetical protein;protein_id=WP_000177057.1;transl_table=11 NZ_JJMC01000039.1 RefSeq pseudogene 9431 9918 . - . ID=gene-AB25_RS28430;Name=AB25_RS28430;end_range=9918,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS28430;partial=true;pseudo=true NZ_JJMC01000039.1 Protein Homology CDS 9431 9918 . - 0 ID=cds-AB25_RS28430;Parent=gene-AB25_RS28430;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=9918,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611482.1;locus_tag=AB25_RS28430;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_JJMC01000039.1 RefSeq gene 9999 11507 . - . ID=gene-AB25_RS13890;Name=ltrA;gbkey=Gene;gene=ltrA;gene_biotype=protein_coding;locus_tag=AB25_RS13890;old_locus_tag=AB25_2331 NZ_JJMC01000039.1 Protein Homology CDS 9999 11507 . - 0 ID=cds-WP_001189123.1-2;Parent=gene-AB25_RS13890;Dbxref=GenBank:WP_001189123.1;Name=WP_001189123.1;Ontology_term=GO:0000373,GO:0003964;gbkey=CDS;gene=ltrA;go_function=RNA-directed DNA polymerase activity|0003964||IEA;go_process=Group II intron splicing|0000373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708749.1;locus_tag=AB25_RS13890;product=group II intron reverse transcriptase/maturase;protein_id=WP_001189123.1;transl_table=11 NZ_JJMC01000039.1 RefSeq gene 11936 12162 . + . ID=gene-AB25_RS32000;Name=AB25_RS32000;end_range=12162,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32000;partial=true NZ_JJMC01000039.1 GeneMarkS-2+ CDS 11936 12162 . + 0 ID=cds-WP_279294772.1-2;Parent=gene-AB25_RS32000;Dbxref=GenBank:WP_279294772.1;Name=WP_279294772.1;end_range=12162,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB25_RS32000;partial=true;product=hypothetical protein;protein_id=WP_279294772.1;transl_table=11 ##sequence-region NZ_JJMC01000040.1 1 11153 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000040.1 RefSeq region 1 11153 . + . ID=NZ_JJMC01000040.1:1..11153;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000040.1 RefSeq pseudogene 1 585 . + . ID=gene-AB25_RS30365;Name=AB25_RS30365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS30365;old_locus_tag=AB25_2332;partial=true;pseudo=true;start_range=.,1 NZ_JJMC01000040.1 Protein Homology CDS 1 585 . + 1 ID=cds-AB25_RS30365;Parent=gene-AB25_RS30365;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB25_RS30365;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJMC01000040.1 RefSeq gene 728 1750 . - . ID=gene-AB25_RS13880;Name=AB25_RS13880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS13880;old_locus_tag=AB25_2333 NZ_JJMC01000040.1 Protein Homology CDS 728 1750 . - 0 ID=cds-WP_000361402.1;Parent=gene-AB25_RS13880;Dbxref=GenBank:WP_000361402.1;Name=WP_000361402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229632.1;locus_tag=AB25_RS13880;product=helicase UvrD;protein_id=WP_000361402.1;transl_table=11 NZ_JJMC01000040.1 RefSeq gene 1735 3300 . - . ID=gene-AB25_RS13875;Name=AB25_RS13875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS13875;old_locus_tag=AB25_2334 NZ_JJMC01000040.1 Protein Homology CDS 1735 3300 . - 0 ID=cds-WP_001128474.1;Parent=gene-AB25_RS13875;Dbxref=GenBank:WP_001128474.1;Name=WP_001128474.1;Ontology_term=GO:0004519,GO:0004527,GO:0005524,GO:0016887,GO:0046872;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,exonuclease activity|0004527||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229631.1;locus_tag=AB25_RS13875;product=ATP-dependent nuclease;protein_id=WP_001128474.1;transl_table=11 NZ_JJMC01000040.1 RefSeq gene 3375 3791 . - . ID=gene-AB25_RS0125505;Name=AB25_RS0125505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0125505 NZ_JJMC01000040.1 Protein Homology CDS 3375 3791 . - 0 ID=cds-WP_001034044.1;Parent=gene-AB25_RS0125505;Dbxref=GenBank:WP_001034044.1;Name=WP_001034044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229630.1;locus_tag=AB25_RS0125505;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_001034044.1;transl_table=11 NZ_JJMC01000040.1 RefSeq gene 3788 4018 . - . ID=gene-AB25_RS0125510;Name=vapB;gbkey=Gene;gene=vapB;gene_biotype=protein_coding;locus_tag=AB25_RS0125510 NZ_JJMC01000040.1 Protein Homology CDS 3788 4018 . - 0 ID=cds-WP_001261286.1;Parent=gene-AB25_RS0125510;Dbxref=GenBank:WP_001261286.1;Name=WP_001261286.1;gbkey=CDS;gene=vapB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229629.1;locus_tag=AB25_RS0125510;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_001261286.1;transl_table=11 NZ_JJMC01000040.1 RefSeq gene 4578 4796 . + . ID=gene-AB25_RS13870;Name=ccdA;gbkey=Gene;gene=ccdA;gene_biotype=protein_coding;locus_tag=AB25_RS13870;old_locus_tag=AB25_2336 NZ_JJMC01000040.1 Protein Homology CDS 4578 4796 . + 0 ID=cds-WP_000813630.1;Parent=gene-AB25_RS13870;Dbxref=GenBank:WP_000813630.1;Name=WP_000813630.1;gbkey=CDS;gene=ccdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052634.1;locus_tag=AB25_RS13870;product=type II toxin-antitoxin system antitoxin CcdA;protein_id=WP_000813630.1;transl_table=11 NZ_JJMC01000040.1 RefSeq gene 4798 5103 . + . ID=gene-AB25_RS13865;Name=ccdB;gbkey=Gene;gene=ccdB;gene_biotype=protein_coding;locus_tag=AB25_RS13865;old_locus_tag=AB25_2337 NZ_JJMC01000040.1 Protein Homology CDS 4798 5103 . + 0 ID=cds-WP_001159871.1;Parent=gene-AB25_RS13865;Dbxref=GenBank:WP_001159871.1;Name=WP_001159871.1;gbkey=CDS;gene=ccdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052635.1;locus_tag=AB25_RS13865;product=type II toxin-antitoxin system toxin CcdB;protein_id=WP_001159871.1;transl_table=11 NZ_JJMC01000040.1 RefSeq gene 5104 5910 . + . ID=gene-AB25_RS13860;Name=AB25_RS13860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS13860;old_locus_tag=AB25_2338 NZ_JJMC01000040.1 Protein Homology CDS 5104 5910 . + 0 ID=cds-WP_000016970.1;Parent=gene-AB25_RS13860;Dbxref=GenBank:WP_000016970.1;Name=WP_000016970.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052636.1;locus_tag=AB25_RS13860;product=site-specific integrase;protein_id=WP_000016970.1;transl_table=11 NZ_JJMC01000040.1 RefSeq gene 6632 7387 . + . ID=gene-AB25_RS13855;Name=repE;gbkey=Gene;gene=repE;gene_biotype=protein_coding;locus_tag=AB25_RS13855;old_locus_tag=AB25_2340 NZ_JJMC01000040.1 Protein Homology CDS 6632 7387 . + 0 ID=cds-WP_000852146.1;Parent=gene-AB25_RS13855;Dbxref=GenBank:WP_000852146.1;Name=WP_000852146.1;gbkey=CDS;gene=repE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000852146.1;locus_tag=AB25_RS13855;product=replication initiation protein RepE;protein_id=WP_000852146.1;transl_table=11 NZ_JJMC01000040.1 RefSeq gene 7975 9141 . + . ID=gene-AB25_RS13850;Name=sopA;gbkey=Gene;gene=sopA;gene_biotype=protein_coding;locus_tag=AB25_RS13850;old_locus_tag=AB25_2342 NZ_JJMC01000040.1 Protein Homology CDS 7975 9141 . + 0 ID=cds-WP_000772446.1;Parent=gene-AB25_RS13850;Dbxref=GenBank:WP_000772446.1;Name=WP_000772446.1;gbkey=CDS;gene=sopA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052640.1;locus_tag=AB25_RS13850;product=plasmid-partitioning protein SopA;protein_id=WP_000772446.1;transl_table=11 NZ_JJMC01000040.1 RefSeq gene 9141 10112 . + . ID=gene-AB25_RS13845;Name=AB25_RS13845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS13845;old_locus_tag=AB25_2343 NZ_JJMC01000040.1 Protein Homology CDS 9141 10112 . + 0 ID=cds-WP_000817031.1;Parent=gene-AB25_RS13845;Dbxref=GenBank:WP_000817031.1;Name=WP_000817031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052641.1;locus_tag=AB25_RS13845;product=ParB/RepB/Spo0J family plasmid partition protein;protein_id=WP_000817031.1;transl_table=11 NZ_JJMC01000040.1 RefSeq pseudogene 11054 11153 . + . ID=gene-AB25_RS32970;Name=AB25_RS32970;end_range=11153,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32970;partial=true;pseudo=true NZ_JJMC01000040.1 Protein Homology CDS 11054 11153 . + 0 ID=cds-AB25_RS32970;Parent=gene-AB25_RS32970;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=11153,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001398155.1;locus_tag=AB25_RS32970;partial=true;product=DUF1281 domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_JJMC01000041.1 1 267988 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000041.1 RefSeq region 1 267988 . + . ID=NZ_JJMC01000041.1:1..267988;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000041.1 RefSeq gene 16 441 . - . ID=gene-AB25_RS13840;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AB25_RS13840;old_locus_tag=AB25_2344 NZ_JJMC01000041.1 Protein Homology CDS 16 441 . - 0 ID=cds-WP_000422761.1;Parent=gene-AB25_RS13840;Dbxref=GenBank:WP_000422761.1;Name=WP_000422761.1;gbkey=CDS;gene=tnpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001373091.1;locus_tag=AB25_RS13840;product=IS66-like element accessory protein TnpA;protein_id=WP_000422761.1;transl_table=11 NZ_JJMC01000041.1 RefSeq pseudogene 525 743 . + . ID=gene-AB25_RS13835;Name=AB25_RS13835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS13835;old_locus_tag=AB25_2345;partial=true;pseudo=true;start_range=.,525 NZ_JJMC01000041.1 Protein Homology CDS 525 743 . + 0 ID=cds-AB25_RS13835;Parent=gene-AB25_RS13835;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AB25_RS13835;partial=true;product=integrase core domain-containing protein;pseudo=true;start_range=.,525;transl_table=11 NZ_JJMC01000041.1 RefSeq pseudogene 785 1324 . - . ID=gene-AB25_RS13830;Name=wzm;gbkey=Gene;gene=wzm;gene_biotype=pseudogene;locus_tag=AB25_RS13830;old_locus_tag=AB25_2346;partial=true;pseudo=true;start_range=.,785 NZ_JJMC01000041.1 Protein Homology CDS 785 1324 . - 0 ID=cds-AB25_RS13830;Parent=gene-AB25_RS13830;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=wzm;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001308747.1;locus_tag=AB25_RS13830;partial=true;product=O8 family O-antigen export ABC transporter permease subunit;pseudo=true;start_range=.,785;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 1326 2702 . - . ID=gene-AB25_RS13825;Name=rfbK;gbkey=Gene;gene=rfbK;gene_biotype=protein_coding;locus_tag=AB25_RS13825;old_locus_tag=AB25_2347 NZ_JJMC01000041.1 Protein Homology CDS 1326 2702 . - 0 ID=cds-WP_021526179.1;Parent=gene-AB25_RS13825;Dbxref=GenBank:WP_021526179.1;Name=WP_021526179.1;gbkey=CDS;gene=rfbK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003596869.1;locus_tag=AB25_RS13825;product=O9 family phosphomannomutase RfbK;protein_id=WP_021526179.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 2726 4141 . - . ID=gene-AB25_RS13820;Name=AB25_RS13820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS13820;old_locus_tag=AB25_2348 NZ_JJMC01000041.1 Protein Homology CDS 2726 4141 . - 0 ID=cds-WP_021535070.1;Parent=gene-AB25_RS13820;Dbxref=GenBank:WP_021535070.1;Name=WP_021535070.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019725197.1;locus_tag=AB25_RS13820;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_021535070.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 4524 4706 . - . ID=gene-AB25_RS32975;Name=AB25_RS32975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32975;old_locus_tag=AB25_2349 NZ_JJMC01000041.1 GeneMarkS-2+ CDS 4524 4706 . - 0 ID=cds-WP_072156629.1;Parent=gene-AB25_RS32975;Dbxref=GenBank:WP_072156629.1;Name=WP_072156629.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB25_RS32975;product=hypothetical protein;protein_id=WP_072156629.1;transl_table=11 NZ_JJMC01000041.1 RefSeq pseudogene 4979 5095 . + . ID=gene-AB25_RS32460;Name=AB25_RS32460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32460;partial=true;pseudo=true;start_range=.,4979 NZ_JJMC01000041.1 Protein Homology CDS 4979 5095 . + 0 ID=cds-AB25_RS32460;Parent=gene-AB25_RS32460;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310854.1;locus_tag=AB25_RS32460;partial=true;product=hypothetical protein;pseudo=true;start_range=.,4979;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 5289 6266 . - . ID=gene-AB25_RS13815;Name=wzzB;gbkey=Gene;gene=wzzB;gene_biotype=protein_coding;locus_tag=AB25_RS13815;old_locus_tag=AB25_2351 NZ_JJMC01000041.1 Protein Homology CDS 5289 6266 . - 0 ID=cds-WP_001774538.1;Parent=gene-AB25_RS13815;Dbxref=GenBank:WP_001774538.1;Name=WP_001774538.1;Ontology_term=GO:0009103;gbkey=CDS;gene=wzzB;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310855.3;locus_tag=AB25_RS13815;product=LPS O-antigen chain length determinant protein WzzB;protein_id=WP_001774538.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 6412 7578 . - . ID=gene-AB25_RS13810;Name=ugd;gbkey=Gene;gene=ugd;gene_biotype=protein_coding;locus_tag=AB25_RS13810;old_locus_tag=AB25_2352 NZ_JJMC01000041.1 Protein Homology CDS 6412 7578 . - 0 ID=cds-WP_032170909.1;Parent=gene-AB25_RS13810;Dbxref=GenBank:WP_032170909.1;Name=WP_032170909.1;Ontology_term=GO:0000271,GO:0003979;gbkey=CDS;gene=ugd;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416532.1;locus_tag=AB25_RS13810;product=UDP-glucose 6-dehydrogenase;protein_id=WP_032170909.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 7826 9232 . - . ID=gene-AB25_RS13805;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=AB25_RS13805;old_locus_tag=AB25_2353 NZ_JJMC01000041.1 Protein Homology CDS 7826 9232 . - 0 ID=cds-WP_032170910.1;Parent=gene-AB25_RS13805;Dbxref=GenBank:WP_032170910.1;Name=WP_032170910.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310857.1;locus_tag=AB25_RS13805;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_032170910.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 9396 10766 . - . ID=gene-AB25_RS13800;Name=cpsG;gbkey=Gene;gene=cpsG;gene_biotype=protein_coding;gene_synonym=manB;locus_tag=AB25_RS13800;old_locus_tag=AB25_2354 NZ_JJMC01000041.1 Protein Homology CDS 9396 10766 . - 0 ID=cds-WP_021526176.1;Parent=gene-AB25_RS13800;Dbxref=GenBank:WP_021526176.1;Name=WP_021526176.1;gbkey=CDS;gene=cpsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416552.1;locus_tag=AB25_RS13800;product=colanic acid biosynthesis phosphomannomutase CpsG;protein_id=WP_021526176.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 11062 12285 . - . ID=gene-AB25_RS13795;Name=AB25_RS13795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS13795;old_locus_tag=AB25_2355 NZ_JJMC01000041.1 Protein Homology CDS 11062 12285 . - 0 ID=cds-WP_021526175.1;Parent=gene-AB25_RS13795;Dbxref=GenBank:WP_021526175.1;Name=WP_021526175.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774543.1;locus_tag=AB25_RS13795;product=glycosyltransferase family 4 protein;protein_id=WP_021526175.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 12290 13768 . - . ID=gene-AB25_RS13790;Name=AB25_RS13790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS13790;old_locus_tag=AB25_2356 NZ_JJMC01000041.1 Protein Homology CDS 12290 13768 . - 0 ID=cds-WP_226256075.1;Parent=gene-AB25_RS13790;Dbxref=GenBank:WP_226256075.1;Name=WP_226256075.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774544.1;locus_tag=AB25_RS13790;product=heparinase II/III family protein;protein_id=WP_226256075.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 14024 15115 . - . ID=gene-AB25_RS13785;Name=AB25_RS13785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS13785;old_locus_tag=AB25_2357 NZ_JJMC01000041.1 Protein Homology CDS 14024 15115 . - 0 ID=cds-WP_249402583.1;Parent=gene-AB25_RS13785;Dbxref=GenBank:WP_249402583.1;Name=WP_249402583.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: protein motif:HMM:NF025072.6;locus_tag=AB25_RS13785;product=glycosyltransferase;protein_id=WP_249402583.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 15136 16188 . - . ID=gene-AB25_RS13780;Name=AB25_RS13780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS13780;old_locus_tag=AB25_2358 NZ_JJMC01000041.1 Protein Homology CDS 15136 16188 . - 0 ID=cds-WP_032170914.1;Parent=gene-AB25_RS13780;Dbxref=GenBank:WP_032170914.1;Name=WP_032170914.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: protein motif:HMM:NF013884.6;locus_tag=AB25_RS13780;product=acyltransferase family protein;protein_id=WP_032170914.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 16304 17248 . - . ID=gene-AB25_RS13775;Name=AB25_RS13775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS13775;old_locus_tag=AB25_2359 NZ_JJMC01000041.1 Protein Homology CDS 16304 17248 . - 0 ID=cds-WP_226256083.1;Parent=gene-AB25_RS13775;Dbxref=GenBank:WP_226256083.1;Name=WP_226256083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774547.1;locus_tag=AB25_RS13775;product=hypothetical protein;protein_id=WP_226256083.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 17446 18696 . - . ID=gene-AB25_RS13770;Name=AB25_RS13770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS13770;old_locus_tag=AB25_2360 NZ_JJMC01000041.1 Protein Homology CDS 17446 18696 . - 0 ID=cds-WP_001774548.1;Parent=gene-AB25_RS13770;Dbxref=GenBank:WP_001774548.1;Name=WP_001774548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774548.1;locus_tag=AB25_RS13770;product=hypothetical protein;protein_id=WP_001774548.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 18683 19810 . - . ID=gene-AB25_RS13765;Name=AB25_RS13765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS13765;old_locus_tag=AB25_2361 NZ_JJMC01000041.1 Protein Homology CDS 18683 19810 . - 0 ID=cds-WP_001774549.1;Parent=gene-AB25_RS13765;Dbxref=GenBank:WP_001774549.1;Name=WP_001774549.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774549.1;locus_tag=AB25_RS13765;product=glycosyltransferase family 4 protein;protein_id=WP_001774549.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 19803 20786 . - . ID=gene-AB25_RS13760;Name=AB25_RS13760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS13760;old_locus_tag=AB25_2362 NZ_JJMC01000041.1 Protein Homology CDS 19803 20786 . - 0 ID=cds-WP_001774550.1;Parent=gene-AB25_RS13760;Dbxref=GenBank:WP_001774550.1;Name=WP_001774550.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774550.1;locus_tag=AB25_RS13760;product=glycosyltransferase family 4 protein;protein_id=WP_001774550.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 20831 22096 . - . ID=gene-AB25_RS13755;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=AB25_RS13755;old_locus_tag=AB25_2363 NZ_JJMC01000041.1 Protein Homology CDS 20831 22096 . - 0 ID=cds-WP_001774551.1;Parent=gene-AB25_RS13755;Dbxref=GenBank:WP_001774551.1;Name=WP_001774551.1;Ontology_term=GO:0009246,GO:0051287,GO:0089714;gbkey=CDS;gene=wecC;go_function=NAD binding|0051287||IEA,UDP-N-acetyl-D-mannosamine dehydrogenase activity|0089714||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774551.1;locus_tag=AB25_RS13755;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_001774551.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 22106 23242 . - . ID=gene-AB25_RS13750;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=AB25_RS13750;old_locus_tag=AB25_2364 NZ_JJMC01000041.1 Protein Homology CDS 22106 23242 . - 0 ID=cds-WP_024190247.1;Parent=gene-AB25_RS13750;Dbxref=GenBank:WP_024190247.1;Name=WP_024190247.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211986.1;locus_tag=AB25_RS13750;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_024190247.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 23726 24619 . - . ID=gene-AB25_RS13745;Name=galF;gbkey=Gene;gene=galF;gene_biotype=protein_coding;locus_tag=AB25_RS13745;old_locus_tag=AB25_2365 NZ_JJMC01000041.1 Protein Homology CDS 23726 24619 . - 0 ID=cds-WP_000183060.1;Parent=gene-AB25_RS13745;Dbxref=GenBank:WP_000183060.1;Name=WP_000183060.1;gbkey=CDS;gene=galF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310873.1;locus_tag=AB25_RS13745;product=UTP--glucose-1-phosphate uridylyltransferase GalF;protein_id=WP_000183060.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 24794 26188 . - . ID=gene-AB25_RS13740;Name=wcaM;gbkey=Gene;gene=wcaM;gene_biotype=protein_coding;locus_tag=AB25_RS13740;old_locus_tag=AB25_2366 NZ_JJMC01000041.1 Protein Homology CDS 24794 26188 . - 0 ID=cds-WP_032170916.1;Parent=gene-AB25_RS13740;Dbxref=GenBank:WP_032170916.1;Name=WP_032170916.1;gbkey=CDS;gene=wcaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416547.1;locus_tag=AB25_RS13740;product=colanic acid biosynthesis protein WcaM;protein_id=WP_032170916.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 26199 27419 . - . ID=gene-AB25_RS13735;Name=wcaL;gbkey=Gene;gene=wcaL;gene_biotype=protein_coding;locus_tag=AB25_RS13735;old_locus_tag=AB25_2367 NZ_JJMC01000041.1 Protein Homology CDS 26199 27419 . - 0 ID=cds-WP_001543329.1;Parent=gene-AB25_RS13735;Dbxref=GenBank:WP_001543329.1;Name=WP_001543329.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaL;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416548.1;locus_tag=AB25_RS13735;product=colanic acid biosynthesis glycosyltransferase WcaL;protein_id=WP_001543329.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 27416 28696 . - . ID=gene-AB25_RS13730;Name=wcaK;gbkey=Gene;gene=wcaK;gene_biotype=protein_coding;locus_tag=AB25_RS13730;old_locus_tag=AB25_2368 NZ_JJMC01000041.1 Protein Homology CDS 27416 28696 . - 0 ID=cds-WP_032170919.1;Parent=gene-AB25_RS13730;Dbxref=GenBank:WP_032170919.1;Name=WP_032170919.1;gbkey=CDS;gene=wcaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416549.1;locus_tag=AB25_RS13730;product=colanic acid biosynthesis pyruvyl transferase WcaK;protein_id=WP_032170919.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 29261 30739 . - . ID=gene-AB25_RS13725;Name=wzxC;gbkey=Gene;gene=wzxC;gene_biotype=protein_coding;locus_tag=AB25_RS13725;old_locus_tag=AB25_2369 NZ_JJMC01000041.1 Protein Homology CDS 29261 30739 . - 0 ID=cds-WP_032170921.1;Parent=gene-AB25_RS13725;Dbxref=GenBank:WP_032170921.1;Name=WP_032170921.1;gbkey=CDS;gene=wzxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310878.1;locus_tag=AB25_RS13725;product=colanic acid undecaprenyl disphosphate flippase WzxC;protein_id=WP_032170921.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 30741 32135 . - . ID=gene-AB25_RS13720;Name=wcaJ;gbkey=Gene;gene=wcaJ;gene_biotype=protein_coding;locus_tag=AB25_RS13720;old_locus_tag=AB25_2370 NZ_JJMC01000041.1 Protein Homology CDS 30741 32135 . - 0 ID=cds-WP_000183130.1;Parent=gene-AB25_RS13720;Dbxref=GenBank:WP_000183130.1;Name=WP_000183130.1;gbkey=CDS;gene=wcaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310879.1;locus_tag=AB25_RS13720;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_000183130.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 32190 33560 . - . ID=gene-AB25_RS13715;Name=cpsG;gbkey=Gene;gene=cpsG;gene_biotype=protein_coding;gene_synonym=manB;locus_tag=AB25_RS13715;old_locus_tag=AB25_2371 NZ_JJMC01000041.1 Protein Homology CDS 32190 33560 . - 0 ID=cds-WP_032170923.1;Parent=gene-AB25_RS13715;Dbxref=GenBank:WP_032170923.1;Name=WP_032170923.1;gbkey=CDS;gene=cpsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416552.1;locus_tag=AB25_RS13715;product=colanic acid biosynthesis phosphomannomutase CpsG;protein_id=WP_032170923.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 33841 35277 . - . ID=gene-AB25_RS13710;Name=cpsB;gbkey=Gene;gene=cpsB;gene_biotype=protein_coding;locus_tag=AB25_RS13710;old_locus_tag=AB25_2373 NZ_JJMC01000041.1 Protein Homology CDS 33841 35277 . - 0 ID=cds-WP_032170925.1;Parent=gene-AB25_RS13710;Dbxref=GenBank:WP_032170925.1;Name=WP_032170925.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;gene=cpsB;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310881.1;locus_tag=AB25_RS13710;product=mannose-1-phosphate guanyltransferase;protein_id=WP_032170925.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 35280 36503 . - . ID=gene-AB25_RS13705;Name=wcaI;gbkey=Gene;gene=wcaI;gene_biotype=protein_coding;locus_tag=AB25_RS13705;old_locus_tag=AB25_2374 NZ_JJMC01000041.1 Protein Homology CDS 35280 36503 . - 0 ID=cds-WP_032170927.1;Parent=gene-AB25_RS13705;Dbxref=GenBank:WP_032170927.1;Name=WP_032170927.1;gbkey=CDS;gene=wcaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310882.1;locus_tag=AB25_RS13705;product=colanic acid biosynthesis fucosyltransferase WcaI;protein_id=WP_032170927.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 36500 36979 . - . ID=gene-AB25_RS13700;Name=gmm;gbkey=Gene;gene=gmm;gene_biotype=protein_coding;gene_synonym=nudD,wcaH,yefC;locus_tag=AB25_RS13700;old_locus_tag=AB25_2375 NZ_JJMC01000041.1 Protein Homology CDS 36500 36979 . - 0 ID=cds-WP_032170929.1;Parent=gene-AB25_RS13700;Dbxref=GenBank:WP_032170929.1;Name=WP_032170929.1;gbkey=CDS;gene=gmm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707946.2;locus_tag=AB25_RS13700;product=GDP-mannose mannosyl hydrolase;protein_id=WP_032170929.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 36982 37947 . - . ID=gene-AB25_RS13695;Name=fcl;gbkey=Gene;gene=fcl;gene_biotype=protein_coding;gene_synonym=wcaG,yefB;locus_tag=AB25_RS13695;old_locus_tag=AB25_2376 NZ_JJMC01000041.1 Protein Homology CDS 36982 37947 . - 0 ID=cds-WP_000043652.1;Parent=gene-AB25_RS13695;Dbxref=GenBank:WP_000043652.1;Name=WP_000043652.1;Ontology_term=GO:0042351,GO:0016853,GO:0050577;gbkey=CDS;gene=fcl;go_function=isomerase activity|0016853||IEA,GDP-L-fucose synthase activity|0050577||IEA;go_process='de novo' GDP-L-fucose biosynthetic process|0042351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416556.1;locus_tag=AB25_RS13695;product=GDP-L-fucose synthase;protein_id=WP_000043652.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 37950 39071 . - . ID=gene-AB25_RS13690;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=AB25_RS13690;old_locus_tag=AB25_2377 NZ_JJMC01000041.1 Protein Homology CDS 37950 39071 . - 0 ID=cds-WP_000048190.1;Parent=gene-AB25_RS13690;Dbxref=GenBank:WP_000048190.1;Name=WP_000048190.1;Ontology_term=GO:0000271,GO:0019673,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,GDP-mannose metabolic process|0019673||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128297.1;locus_tag=AB25_RS13690;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_000048190.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 39097 39645 . - . ID=gene-AB25_RS13685;Name=wcaF;gbkey=Gene;gene=wcaF;gene_biotype=protein_coding;locus_tag=AB25_RS13685;old_locus_tag=AB25_2378 NZ_JJMC01000041.1 Protein Homology CDS 39097 39645 . - 0 ID=cds-WP_001153547.1;Parent=gene-AB25_RS13685;Dbxref=GenBank:WP_001153547.1;Name=WP_001153547.1;gbkey=CDS;gene=wcaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416558.1;locus_tag=AB25_RS13685;product=colanic acid biosynthesis acetyltransferase WcaF;protein_id=WP_001153547.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 39661 40407 . - . ID=gene-AB25_RS13680;Name=wcaE;gbkey=Gene;gene=wcaE;gene_biotype=protein_coding;locus_tag=AB25_RS13680;old_locus_tag=AB25_2379 NZ_JJMC01000041.1 Protein Homology CDS 39661 40407 . - 0 ID=cds-WP_032170931.1;Parent=gene-AB25_RS13680;Dbxref=GenBank:WP_032170931.1;Name=WP_032170931.1;gbkey=CDS;gene=wcaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310887.1;locus_tag=AB25_RS13680;product=colanic acid biosynthesis glycosyltransferase WcaE;protein_id=WP_032170931.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 40418 41635 . - . ID=gene-AB25_RS13675;Name=wcaD;gbkey=Gene;gene=wcaD;gene_biotype=protein_coding;locus_tag=AB25_RS13675;old_locus_tag=AB25_2380 NZ_JJMC01000041.1 Protein Homology CDS 40418 41635 . - 0 ID=cds-WP_000107816.1;Parent=gene-AB25_RS13675;Dbxref=GenBank:WP_000107816.1;Name=WP_000107816.1;gbkey=CDS;gene=wcaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416560.1;locus_tag=AB25_RS13675;product=colanic acid polymerase WcaD;protein_id=WP_000107816.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 41610 42827 . - . ID=gene-AB25_RS13670;Name=wcaC;gbkey=Gene;gene=wcaC;gene_biotype=protein_coding;locus_tag=AB25_RS13670;old_locus_tag=AB25_2381 NZ_JJMC01000041.1 Protein Homology CDS 41610 42827 . - 0 ID=cds-WP_001023946.1;Parent=gene-AB25_RS13670;Dbxref=GenBank:WP_001023946.1;Name=WP_001023946.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaC;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310889.1;locus_tag=AB25_RS13670;product=colanic acid biosynthesis glycosyltransferase WcaC;protein_id=WP_001023946.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 42824 43312 . - . ID=gene-AB25_RS13665;Name=wcaB;gbkey=Gene;gene=wcaB;gene_biotype=protein_coding;locus_tag=AB25_RS13665;old_locus_tag=AB25_2382 NZ_JJMC01000041.1 Protein Homology CDS 42824 43312 . - 0 ID=cds-WP_000888729.1;Parent=gene-AB25_RS13665;Dbxref=GenBank:WP_000888729.1;Name=WP_000888729.1;gbkey=CDS;gene=wcaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310890.1;locus_tag=AB25_RS13665;product=colanic acid biosynthesis acetyltransferase WcaB;protein_id=WP_000888729.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 43315 44154 . - . ID=gene-AB25_RS13660;Name=wcaA;gbkey=Gene;gene=wcaA;gene_biotype=protein_coding;locus_tag=AB25_RS13660;old_locus_tag=AB25_2383 NZ_JJMC01000041.1 Protein Homology CDS 43315 44154 . - 0 ID=cds-WP_000654503.1;Parent=gene-AB25_RS13660;Dbxref=GenBank:WP_000654503.1;Name=WP_000654503.1;gbkey=CDS;gene=wcaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310891.1;locus_tag=AB25_RS13660;product=colanic acid biosynthesis glycosyltransferase WcaA;protein_id=WP_000654503.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 44332 46494 . - . ID=gene-AB25_RS13655;Name=wzc;gbkey=Gene;gene=wzc;gene_biotype=protein_coding;locus_tag=AB25_RS13655;old_locus_tag=AB25_2384 NZ_JJMC01000041.1 Protein Homology CDS 44332 46494 . - 0 ID=cds-WP_000137118.1;Parent=gene-AB25_RS13655;Dbxref=GenBank:WP_000137118.1;Name=WP_000137118.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzc;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416564.4;locus_tag=AB25_RS13655;product=tyrosine-protein kinase Wzc;protein_id=WP_000137118.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 46497 46940 . - . ID=gene-AB25_RS13650;Name=wzb;gbkey=Gene;gene=wzb;gene_biotype=protein_coding;locus_tag=AB25_RS13650;old_locus_tag=AB25_2385 NZ_JJMC01000041.1 Protein Homology CDS 46497 46940 . - 0 ID=cds-WP_000482901.1;Parent=gene-AB25_RS13650;Dbxref=GenBank:WP_000482901.1;Name=WP_000482901.1;gbkey=CDS;gene=wzb;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310893.1;locus_tag=AB25_RS13650;product=low molecular weight protein-tyrosine-phosphatase Wzb;protein_id=WP_000482901.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 46946 48085 . - . ID=gene-AB25_RS13645;Name=wza;gbkey=Gene;gene=wza;gene_biotype=protein_coding;locus_tag=AB25_RS13645;old_locus_tag=AB25_2386 NZ_JJMC01000041.1 Protein Homology CDS 46946 48085 . - 0 ID=cds-WP_000978094.1;Parent=gene-AB25_RS13645;Dbxref=GenBank:WP_000978094.1;Name=WP_000978094.1;gbkey=CDS;gene=wza;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310894.1;locus_tag=AB25_RS13645;product=polysaccharide export protein Wza;protein_id=WP_000978094.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 48394 48543 . + . ID=gene-AB25_RS32005;Name=AB25_RS32005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32005 NZ_JJMC01000041.1 GeneMarkS-2+ CDS 48394 48543 . + 0 ID=cds-WP_162829205.1;Parent=gene-AB25_RS32005;Dbxref=GenBank:WP_162829205.1;Name=WP_162829205.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB25_RS32005;product=hypothetical protein;protein_id=WP_162829205.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 48744 50327 . + . ID=gene-AB25_RS13640;Name=yegH;gbkey=Gene;gene=yegH;gene_biotype=protein_coding;locus_tag=AB25_RS13640;old_locus_tag=AB25_2388 NZ_JJMC01000041.1 Protein Homology CDS 48744 50327 . + 0 ID=cds-WP_001296218.1;Parent=gene-AB25_RS13640;Dbxref=GenBank:WP_001296218.1;Name=WP_001296218.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yegH;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310895.2;locus_tag=AB25_RS13640;product=TerC family protein;protein_id=WP_001296218.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 50601 52454 . - . ID=gene-AB25_RS13635;Name=asmA;gbkey=Gene;gene=asmA;gene_biotype=protein_coding;locus_tag=AB25_RS13635;old_locus_tag=AB25_2389 NZ_JJMC01000041.1 Protein Homology CDS 50601 52454 . - 0 ID=cds-WP_001252331.1;Parent=gene-AB25_RS13635;Dbxref=GenBank:WP_001252331.1;Name=WP_001252331.1;gbkey=CDS;gene=asmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416568.1;locus_tag=AB25_RS13635;product=outer membrane assembly protein AsmA;protein_id=WP_001252331.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 52476 53057 . - . ID=gene-AB25_RS13630;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=AB25_RS13630;old_locus_tag=AB25_2390 NZ_JJMC01000041.1 Protein Homology CDS 52476 53057 . - 0 ID=cds-WP_001234767.1;Parent=gene-AB25_RS13630;Dbxref=GenBank:WP_001234767.1;Name=WP_001234767.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942378.1;locus_tag=AB25_RS13630;product=dCTP deaminase;protein_id=WP_001234767.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 53149 53790 . - . ID=gene-AB25_RS13625;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=AB25_RS13625;old_locus_tag=AB25_2391 NZ_JJMC01000041.1 Protein Homology CDS 53149 53790 . - 0 ID=cds-WP_001295424.1;Parent=gene-AB25_RS13625;Dbxref=GenBank:WP_001295424.1;Name=WP_001295424.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707960.1;locus_tag=AB25_RS13625;product=uridine kinase;protein_id=WP_001295424.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 54108 57425 . + . ID=gene-AB25_RS13620;Name=dgcE;gbkey=Gene;gene=dgcE;gene_biotype=protein_coding;locus_tag=AB25_RS13620;old_locus_tag=AB25_2392 NZ_JJMC01000041.1 Protein Homology CDS 54108 57425 . + 0 ID=cds-WP_032170934.1;Parent=gene-AB25_RS13620;Dbxref=GenBank:WP_032170934.1;Name=WP_032170934.1;Ontology_term=GO:0005515;gbkey=CDS;gene=dgcE;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416571.1;locus_tag=AB25_RS13620;product=diguanylate cyclase;protein_id=WP_032170934.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 57464 58321 . - . ID=gene-AB25_RS13615;Name=alkA;gbkey=Gene;gene=alkA;gene_biotype=protein_coding;locus_tag=AB25_RS13615;old_locus_tag=AB25_2393 NZ_JJMC01000041.1 Protein Homology CDS 57464 58321 . - 0 ID=cds-WP_000288410.1;Parent=gene-AB25_RS13615;Dbxref=GenBank:WP_000288410.1;Name=WP_000288410.1;Ontology_term=GO:0006281,GO:0003824;gbkey=CDS;gene=alkA;go_function=catalytic activity|0003824||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000288352.1;locus_tag=AB25_RS13615;product=DNA-3-methyladenine glycosylase 2;protein_id=WP_000288410.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 58455 59807 . + . ID=gene-AB25_RS13610;Name=yegD;gbkey=Gene;gene=yegD;gene_biotype=protein_coding;locus_tag=AB25_RS13610;old_locus_tag=AB25_2394 NZ_JJMC01000041.1 Protein Homology CDS 58455 59807 . + 0 ID=cds-WP_000469734.1;Parent=gene-AB25_RS13610;Dbxref=GenBank:WP_000469734.1;Name=WP_000469734.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yegD;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416573.4;locus_tag=AB25_RS13610;product=molecular chaperone;protein_id=WP_000469734.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 59819 61765 . - . ID=gene-AB25_RS13605;Name=yegI;gbkey=Gene;gene=yegI;gene_biotype=protein_coding;locus_tag=AB25_RS13605;old_locus_tag=AB25_2395 NZ_JJMC01000041.1 Protein Homology CDS 59819 61765 . - 0 ID=cds-WP_000856109.1;Parent=gene-AB25_RS13605;Dbxref=GenBank:WP_000856109.1;Name=WP_000856109.1;gbkey=CDS;gene=yegI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416574.1;locus_tag=AB25_RS13605;product=protein kinase YegI;protein_id=WP_000856109.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 61963 62424 . + . ID=gene-AB25_RS13600;Name=yegJ;gbkey=Gene;gene=yegJ;gene_biotype=protein_coding;locus_tag=AB25_RS13600;old_locus_tag=AB25_2396 NZ_JJMC01000041.1 Protein Homology CDS 61963 62424 . + 0 ID=cds-WP_000722352.1;Parent=gene-AB25_RS13600;Dbxref=GenBank:WP_000722352.1;Name=WP_000722352.1;gbkey=CDS;gene=yegJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416575.1;locus_tag=AB25_RS13600;product=YegJ family protein;protein_id=WP_000722352.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 62489 63250 . - . ID=gene-AB25_RS13595;Name=pphC;gbkey=Gene;gene=pphC;gene_biotype=protein_coding;locus_tag=AB25_RS13595;old_locus_tag=AB25_2397 NZ_JJMC01000041.1 Protein Homology CDS 62489 63250 . - 0 ID=cds-WP_000119066.1;Parent=gene-AB25_RS13595;Dbxref=GenBank:WP_000119066.1;Name=WP_000119066.1;gbkey=CDS;gene=pphC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416576.1;locus_tag=AB25_RS13595;product=protein-serine/threonine phosphatase PphC;protein_id=WP_000119066.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 63247 63906 . - . ID=gene-AB25_RS13590;Name=yegL;gbkey=Gene;gene=yegL;gene_biotype=protein_coding;locus_tag=AB25_RS13590;old_locus_tag=AB25_2398 NZ_JJMC01000041.1 Protein Homology CDS 63247 63906 . - 0 ID=cds-WP_000003186.1;Parent=gene-AB25_RS13590;Dbxref=GenBank:WP_000003186.1;Name=WP_000003186.1;gbkey=CDS;gene=yegL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310908.1;locus_tag=AB25_RS13590;product=vWA domain-containing protein;protein_id=WP_000003186.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 64127 64186 . - . ID=gene-AB25_RS30380;Name=ibsA;gbkey=Gene;gene=ibsA;gene_biotype=protein_coding;locus_tag=AB25_RS30380 NZ_JJMC01000041.1 Protein Homology CDS 64127 64186 . - 0 ID=cds-WP_010723109.1;Parent=gene-AB25_RS30380;Dbxref=GenBank:WP_010723109.1;Name=WP_010723109.1;gbkey=CDS;gene=ibsA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791247.1;locus_tag=AB25_RS30380;product=type I toxin-antitoxin system toxin IbsA;protein_id=WP_010723109.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 64459 64515 . - . ID=gene-AB25_RS31170;Name=AB25_RS31170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31170 NZ_JJMC01000041.1 Protein Homology CDS 64459 64515 . - 0 ID=cds-WP_001386899.1;Parent=gene-AB25_RS31170;Dbxref=GenBank:WP_001386899.1;Name=WP_001386899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791248.1;locus_tag=AB25_RS31170;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_001386899.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 64787 64843 . - . ID=gene-AB25_RS31175;Name=AB25_RS31175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31175 NZ_JJMC01000041.1 Protein Homology CDS 64787 64843 . - 0 ID=cds-WP_001386901.1;Parent=gene-AB25_RS31175;Dbxref=GenBank:WP_001386901.1;Name=WP_001386901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791248.1;locus_tag=AB25_RS31175;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_001386901.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 65122 66369 . + . ID=gene-AB25_RS13585;Name=mdtA;gbkey=Gene;gene=mdtA;gene_biotype=protein_coding;locus_tag=AB25_RS13585;old_locus_tag=AB25_2399 NZ_JJMC01000041.1 Protein Homology CDS 65122 66369 . + 0 ID=cds-WP_000678962.1;Parent=gene-AB25_RS13585;Dbxref=GenBank:WP_000678962.1;Name=WP_000678962.1;gbkey=CDS;gene=mdtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416578.2;locus_tag=AB25_RS13585;product=multidrug efflux RND transporter subunit MdtA;protein_id=WP_000678962.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 66369 69491 . + . ID=gene-AB25_RS13580;Name=mdtB;gbkey=Gene;gene=mdtB;gene_biotype=protein_coding;locus_tag=AB25_RS13580;old_locus_tag=AB25_2400 NZ_JJMC01000041.1 Protein Homology CDS 66369 69491 . + 0 ID=cds-WP_001197875.1;Parent=gene-AB25_RS13580;Dbxref=GenBank:WP_001197875.1;Name=WP_001197875.1;gbkey=CDS;gene=mdtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416579.1;locus_tag=AB25_RS13580;product=multidrug efflux RND transporter permease subunit MdtB;protein_id=WP_001197875.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 69492 72569 . + . ID=gene-AB25_RS13575;Name=mdtC;gbkey=Gene;gene=mdtC;gene_biotype=protein_coding;locus_tag=AB25_RS13575;old_locus_tag=AB25_2401 NZ_JJMC01000041.1 Protein Homology CDS 69492 72569 . + 0 ID=cds-WP_000667554.1;Parent=gene-AB25_RS13575;Dbxref=GenBank:WP_000667554.1;Name=WP_000667554.1;gbkey=CDS;gene=mdtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416580.1;locus_tag=AB25_RS13575;product=multidrug efflux RND transporter permease subunit MdtC;protein_id=WP_000667554.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 72570 73985 . + . ID=gene-AB25_RS13570;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=AB25_RS13570;old_locus_tag=AB25_2402 NZ_JJMC01000041.1 Protein Homology CDS 72570 73985 . + 0 ID=cds-WP_000130887.1;Parent=gene-AB25_RS13570;Dbxref=GenBank:WP_000130887.1;Name=WP_000130887.1;gbkey=CDS;gene=mdtD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310912.1;locus_tag=AB25_RS13570;product=MFS transporter;protein_id=WP_000130887.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 73982 75385 . + . ID=gene-AB25_RS13565;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;locus_tag=AB25_RS13565;old_locus_tag=AB25_2403 NZ_JJMC01000041.1 Protein Homology CDS 73982 75385 . + 0 ID=cds-WP_000675146.1;Parent=gene-AB25_RS13565;Dbxref=GenBank:WP_000675146.1;Name=WP_000675146.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=baeS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310913.1;locus_tag=AB25_RS13565;product=two-component system sensor histidine kinase BaeS;protein_id=WP_000675146.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 75382 76104 . + . ID=gene-AB25_RS13560;Name=baeR;gbkey=Gene;gene=baeR;gene_biotype=protein_coding;locus_tag=AB25_RS13560;old_locus_tag=AB25_2404 NZ_JJMC01000041.1 Protein Homology CDS 75382 76104 . + 0 ID=cds-WP_000137873.1;Parent=gene-AB25_RS13560;Dbxref=GenBank:WP_000137873.1;Name=WP_000137873.1;Ontology_term=GO:0000160,GO:0003677;gbkey=CDS;gene=baeR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416583.1;locus_tag=AB25_RS13560;product=two-component system response regulator BaeR;protein_id=WP_000137873.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 76295 76627 . + . ID=gene-AB25_RS13555;Name=yegP;gbkey=Gene;gene=yegP;gene_biotype=protein_coding;locus_tag=AB25_RS13555;old_locus_tag=AB25_2406 NZ_JJMC01000041.1 Protein Homology CDS 76295 76627 . + 0 ID=cds-WP_000929408.1;Parent=gene-AB25_RS13555;Dbxref=GenBank:WP_000929408.1;Name=WP_000929408.1;gbkey=CDS;gene=yegP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310915.2;locus_tag=AB25_RS13555;product=YegP family protein;protein_id=WP_000929408.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 76836 77132 . + . ID=gene-AB25_RS13550;Name=AB25_RS13550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS13550;old_locus_tag=AB25_2407 NZ_JJMC01000041.1 Protein Homology CDS 76836 77132 . + 0 ID=cds-WP_001307279.1;Parent=gene-AB25_RS13550;Dbxref=GenBank:WP_001307279.1;Name=WP_001307279.1;Ontology_term=GO:0051983;gbkey=CDS;go_process=regulation of chromosome segregation|0051983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001307279.1;locus_tag=AB25_RS13550;product=type II toxin-antitoxin system ParD family antitoxin;protein_id=WP_001307279.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 77134 77430 . + . ID=gene-AB25_RS13545;Name=AB25_RS13545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS13545;old_locus_tag=AB25_2408 NZ_JJMC01000041.1 Protein Homology CDS 77134 77430 . + 0 ID=cds-WP_001220181.1;Parent=gene-AB25_RS13545;Dbxref=GenBank:WP_001220181.1;Name=WP_001220181.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001220181.1;locus_tag=AB25_RS13545;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_001220181.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 77533 78894 . + . ID=gene-AB25_RS13540;Name=yegQ;gbkey=Gene;gene=yegQ;gene_biotype=protein_coding;locus_tag=AB25_RS13540;old_locus_tag=AB25_2409 NZ_JJMC01000041.1 Protein Homology CDS 77533 78894 . + 0 ID=cds-WP_000476011.1;Parent=gene-AB25_RS13540;Dbxref=GenBank:WP_000476011.1;Name=WP_000476011.1;gbkey=CDS;gene=yegQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416585.1;locus_tag=AB25_RS13540;product=tRNA 5-hydroxyuridine modification protein YegQ;protein_id=WP_000476011.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 79168 79392 . - . ID=gene-AB25_RS28485;Name=ogrK;gbkey=Gene;gene=ogrK;gene_biotype=protein_coding;locus_tag=AB25_RS28485 NZ_JJMC01000041.1 Protein Homology CDS 79168 79392 . - 0 ID=cds-WP_032170938.1;Parent=gene-AB25_RS28485;Dbxref=GenBank:WP_032170938.1;Name=WP_032170938.1;gbkey=CDS;gene=ogrK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416586.1;locus_tag=AB25_RS28485;product=prophage transcriptional regulator OgrK;protein_id=WP_032170938.1;transl_table=11 NZ_JJMC01000041.1 RefSeq pseudogene 79331 80194 . - . ID=gene-AB25_RS13535;Name=AB25_RS13535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS13535;old_locus_tag=AB25_2410;partial=true;pseudo=true;start_range=.,79331 NZ_JJMC01000041.1 Protein Homology CDS 79331 80194 . - 0 ID=cds-AB25_RS13535;Parent=gene-AB25_RS13535;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001483446.1;locus_tag=AB25_RS13535;partial=true;product=phage tail sheath subtilisin-like domain-containing protein;pseudo=true;start_range=.,79331;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 80470 82083 . - . ID=gene-AB25_RS13530;Name=AB25_RS13530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS13530;old_locus_tag=AB25_2411 NZ_JJMC01000041.1 Protein Homology CDS 80470 82083 . - 0 ID=cds-WP_032296014.1;Parent=gene-AB25_RS13530;Dbxref=GenBank:WP_032296014.1;Name=WP_032296014.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025844.6;locus_tag=AB25_RS13530;product=DUF4435 domain-containing protein;protein_id=WP_032296014.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 82346 82873 . - . ID=gene-AB25_RS13525;Name=AB25_RS13525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS13525;old_locus_tag=AB25_2412 NZ_JJMC01000041.1 Protein Homology CDS 82346 82873 . - 0 ID=cds-WP_001541423.1;Parent=gene-AB25_RS13525;Dbxref=GenBank:WP_001541423.1;Name=WP_001541423.1;Ontology_term=GO:0098004;gbkey=CDS;go_process=virus tail fiber assembly|0098004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001164091.1;locus_tag=AB25_RS13525;product=tail fiber assembly protein;protein_id=WP_001541423.1;transl_table=11 NZ_JJMC01000041.1 RefSeq pseudogene 82877 83125 . - . ID=gene-AB25_RS32705;Name=AB25_RS32705;end_range=83125,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32705;partial=true;pseudo=true NZ_JJMC01000041.1 Protein Homology CDS 82877 83125 . - 0 ID=cds-AB25_RS32705;Parent=gene-AB25_RS32705;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=83125,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001533802.1;locus_tag=AB25_RS32705;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJMC01000041.1 RefSeq pseudogene 83124 83258 . - . ID=gene-AB25_RS31740;Name=AB25_RS31740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS31740;old_locus_tag=AB25_2414;partial=true;pseudo=true;start_range=.,83124 NZ_JJMC01000041.1 Protein Homology CDS 83124 83258 . - 0 ID=cds-AB25_RS31740;Parent=gene-AB25_RS31740;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228332.1;locus_tag=AB25_RS31740;partial=true;product=baseplate assembly protein;pseudo=true;start_range=.,83124;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 83263 83610 . - . ID=gene-AB25_RS13520;Name=AB25_RS13520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS13520;old_locus_tag=AB25_2415 NZ_JJMC01000041.1 Protein Homology CDS 83263 83610 . - 0 ID=cds-WP_001393127.1;Parent=gene-AB25_RS13520;Dbxref=GenBank:WP_001393127.1;Name=WP_001393127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001554305.1;locus_tag=AB25_RS13520;product=GPW/gp25 family protein;protein_id=WP_001393127.1;transl_table=11 NZ_JJMC01000041.1 RefSeq pseudogene 83607 83702 . - . ID=gene-AB25_RS32465;Name=AB25_RS32465;end_range=83702,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32465;partial=true;pseudo=true NZ_JJMC01000041.1 Protein Homology CDS 83607 83702 . - 0 ID=cds-AB25_RS32465;Parent=gene-AB25_RS32465;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=83702,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001093709.1;locus_tag=AB25_RS32465;partial=true;product=phage baseplate assembly protein V;pseudo=true;transl_table=11 NZ_JJMC01000041.1 RefSeq pseudogene 83703 83936 . + . ID=gene-AB25_RS27360;Name=AB25_RS27360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS27360;old_locus_tag=AB25_2416;partial=true;pseudo=true;start_range=.,83703 NZ_JJMC01000041.1 Protein Homology CDS 83703 83936 . + 0 ID=cds-AB25_RS27360;Parent=gene-AB25_RS27360;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001357052.1;locus_tag=AB25_RS27360;partial=true;product=hypothetical protein;pseudo=true;start_range=.,83703;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 83936 84970 . + . ID=gene-AB25_RS13515;Name=AB25_RS13515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS13515;old_locus_tag=AB25_2417 NZ_JJMC01000041.1 Protein Homology CDS 83936 84970 . + 0 ID=cds-WP_032173489.1;Parent=gene-AB25_RS13515;Dbxref=GenBank:WP_032173489.1;Name=WP_032173489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001752368.1;locus_tag=AB25_RS13515;product=phage portal protein;protein_id=WP_032173489.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 85474 87690 . + . ID=gene-AB25_RS13510;Name=AB25_RS13510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS13510;old_locus_tag=AB25_2419 NZ_JJMC01000041.1 Protein Homology CDS 85474 87690 . + 0 ID=cds-WP_001583661.1;Parent=gene-AB25_RS13510;Dbxref=GenBank:WP_001583661.1;Name=WP_001583661.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001583661.1;locus_tag=AB25_RS13510;product=AAA family ATPase;protein_id=WP_001583661.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 87914 90205 . - . ID=gene-AB25_RS13505;Name=AB25_RS13505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS13505;old_locus_tag=AB25_2420 NZ_JJMC01000041.1 Protein Homology CDS 87914 90205 . - 0 ID=cds-WP_023278426.1;Parent=gene-AB25_RS13505;Dbxref=GenBank:WP_023278426.1;Name=WP_023278426.1;Ontology_term=GO:0006260,GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001583663.1;locus_tag=AB25_RS13505;product=replication endonuclease;protein_id=WP_023278426.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 90195 90470 . - . ID=gene-AB25_RS13500;Name=AB25_RS13500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS13500;old_locus_tag=AB25_2421 NZ_JJMC01000041.1 Protein Homology CDS 90195 90470 . - 0 ID=cds-WP_000027668.1;Parent=gene-AB25_RS13500;Dbxref=GenBank:WP_000027668.1;Name=WP_000027668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027668.1;locus_tag=AB25_RS13500;product=DUF5405 family protein;protein_id=WP_000027668.1;transl_table=11 NZ_JJMC01000041.1 RefSeq pseudogene 90467 90559 . - . ID=gene-AB25_RS31185;Name=AB25_RS31185;end_range=90559,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS31185;partial=true;pseudo=true NZ_JJMC01000041.1 Protein Homology CDS 90467 90559 . - 0 ID=cds-AB25_RS31185;Parent=gene-AB25_RS31185;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008270;end_range=90559,.;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016242005.1;locus_tag=AB25_RS31185;partial=true;product=TraR/DksA C4-type zinc finger protein;pseudo=true;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 90560 91531 . + . ID=gene-AB25_RS13495;Name=AB25_RS13495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS13495;old_locus_tag=AB25_2422 NZ_JJMC01000041.1 Protein Homology CDS 90560 91531 . + 0 ID=cds-WP_032296015.1;Parent=gene-AB25_RS13495;Dbxref=GenBank:WP_032296015.1;Name=WP_032296015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001755162.1;locus_tag=AB25_RS13495;product=phage integrase;protein_id=WP_032296015.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 91797 92114 . - . ID=gene-AB25_RS13490;Name=yegR;gbkey=Gene;gene=yegR;gene_biotype=protein_coding;locus_tag=AB25_RS13490;old_locus_tag=AB25_2423 NZ_JJMC01000041.1 Protein Homology CDS 91797 92114 . - 0 ID=cds-WP_000716757.1;Parent=gene-AB25_RS13490;Dbxref=GenBank:WP_000716757.1;Name=WP_000716757.1;gbkey=CDS;gene=yegR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310918.2;locus_tag=AB25_RS13490;product=protein YegR;protein_id=WP_000716757.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 92520 93419 . + . ID=gene-AB25_RS13485;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=AB25_RS13485;old_locus_tag=AB25_2424 NZ_JJMC01000041.1 Protein Homology CDS 92520 93419 . + 0 ID=cds-WP_000807362.1;Parent=gene-AB25_RS13485;Dbxref=GenBank:WP_000807362.1;Name=WP_000807362.1;Ontology_term=GO:0001727,GO:0046872;gbkey=CDS;gene=yegS;go_function=lipid kinase activity|0001727||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310919.1;locus_tag=AB25_RS13485;product=lipid kinase YegS;protein_id=WP_000807362.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 93501 94274 . - . ID=gene-AB25_RS13480;Name=AB25_RS13480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS13480;old_locus_tag=AB25_2425 NZ_JJMC01000041.1 Protein Homology CDS 93501 94274 . - 0 ID=cds-WP_001295426.1;Parent=gene-AB25_RS13480;Dbxref=GenBank:WP_001295426.1;Name=WP_001295426.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001083894.1;locus_tag=AB25_RS13480;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001295426.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 94380 95420 . - . ID=gene-AB25_RS13475;Name=gatD;gbkey=Gene;gene=gatD;gene_biotype=protein_coding;locus_tag=AB25_RS13475;old_locus_tag=AB25_2426 NZ_JJMC01000041.1 Protein Homology CDS 94380 95420 . - 0 ID=cds-WP_000844208.1;Parent=gene-AB25_RS13475;Dbxref=GenBank:WP_000844208.1;Name=WP_000844208.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;gene=gatD;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310921.1;locus_tag=AB25_RS13475;product=galactitol-1-phosphate 5-dehydrogenase;protein_id=WP_000844208.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 95468 96823 . - . ID=gene-AB25_RS13470;Name=AB25_RS13470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS13470;old_locus_tag=AB25_2427 NZ_JJMC01000041.1 Protein Homology CDS 95468 96823 . - 0 ID=cds-WP_000490679.1;Parent=gene-AB25_RS13470;Dbxref=GenBank:WP_000490679.1;Name=WP_000490679.1;Ontology_term=GO:0009401,GO:0015796,GO:0015577,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=galactitol transmembrane transporter activity|0015577||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,galactitol transmembrane transport|0015796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310922.1;locus_tag=AB25_RS13470;product=PTS galactitol transporter subunit IIC;protein_id=WP_000490679.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 96827 97111 . - . ID=gene-AB25_RS13465;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=AB25_RS13465;old_locus_tag=AB25_2428 NZ_JJMC01000041.1 Protein Homology CDS 96827 97111 . - 0 ID=cds-WP_000823272.1;Parent=gene-AB25_RS13465;Dbxref=GenBank:WP_000823272.1;Name=WP_000823272.1;gbkey=CDS;gene=gatB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416596.1;locus_tag=AB25_RS13465;product=PTS galactitol transporter subunit IIB;protein_id=WP_000823272.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 97142 97594 . - . ID=gene-AB25_RS13460;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=AB25_RS13460;old_locus_tag=AB25_2429 NZ_JJMC01000041.1 Protein Homology CDS 97142 97594 . - 0 ID=cds-WP_000182914.1;Parent=gene-AB25_RS13460;Dbxref=GenBank:WP_000182914.1;Name=WP_000182914.1;gbkey=CDS;gene=gatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310924.1;locus_tag=AB25_RS13460;product=PTS galactitol transporter subunit IIA;protein_id=WP_000182914.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 97604 98866 . - . ID=gene-AB25_RS13455;Name=gatZ;gbkey=Gene;gene=gatZ;gene_biotype=protein_coding;locus_tag=AB25_RS13455;old_locus_tag=AB25_2430 NZ_JJMC01000041.1 Protein Homology CDS 97604 98866 . - 0 ID=cds-WP_000853886.1;Parent=gene-AB25_RS13455;Dbxref=GenBank:WP_000853886.1;Name=WP_000853886.1;gbkey=CDS;gene=gatZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416598.1;locus_tag=AB25_RS13455;product=tagatose-bisphosphate aldolase subunit GatZ;protein_id=WP_000853886.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 98895 99749 . - . ID=gene-AB25_RS13450;Name=gatY;gbkey=Gene;gene=gatY;gene_biotype=protein_coding;locus_tag=AB25_RS13450;old_locus_tag=AB25_2431 NZ_JJMC01000041.1 Protein Homology CDS 98895 99749 . - 0 ID=cds-WP_000289788.1;Parent=gene-AB25_RS13450;Dbxref=GenBank:WP_000289788.1;Name=WP_000289788.1;gbkey=CDS;gene=gatY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416599.2;locus_tag=AB25_RS13450;product=tagatose-bisphosphate aldolase subunit GatY;protein_id=WP_000289788.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 100060 101112 . - . ID=gene-AB25_RS13445;Name=fbaB;gbkey=Gene;gene=fbaB;gene_biotype=protein_coding;locus_tag=AB25_RS13445;old_locus_tag=AB25_2432 NZ_JJMC01000041.1 Protein Homology CDS 100060 101112 . - 0 ID=cds-WP_000129551.1;Parent=gene-AB25_RS13445;Dbxref=GenBank:WP_000129551.1;Name=WP_000129551.1;Ontology_term=GO:0004332;gbkey=CDS;gene=fbaB;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820796.1;locus_tag=AB25_RS13445;product=class I fructose-bisphosphate aldolase;protein_id=WP_000129551.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 101369 102646 . + . ID=gene-AB25_RS13440;Name=yegT;gbkey=Gene;gene=yegT;gene_biotype=protein_coding;locus_tag=AB25_RS13440;old_locus_tag=AB25_2433 NZ_JJMC01000041.1 Protein Homology CDS 101369 102646 . + 0 ID=cds-WP_000858498.1;Parent=gene-AB25_RS13440;Dbxref=GenBank:WP_000858498.1;Name=WP_000858498.1;Ontology_term=GO:0015858,GO:0005337,GO:0016020;gbkey=CDS;gene=yegT;go_component=membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA;go_process=nucleoside transport|0015858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416601.1;locus_tag=AB25_RS13440;product=nucleoside permease;protein_id=WP_000858498.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 102643 103647 . + . ID=gene-AB25_RS13435;Name=yegU;gbkey=Gene;gene=yegU;gene_biotype=protein_coding;locus_tag=AB25_RS13435;old_locus_tag=AB25_2434 NZ_JJMC01000041.1 Protein Homology CDS 102643 103647 . + 0 ID=cds-WP_000846217.1;Parent=gene-AB25_RS13435;Dbxref=GenBank:WP_000846217.1;Name=WP_000846217.1;gbkey=CDS;gene=yegU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416602.1;locus_tag=AB25_RS13435;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_000846217.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 103644 104609 . + . ID=gene-AB25_RS13430;Name=yegV;gbkey=Gene;gene=yegV;gene_biotype=protein_coding;locus_tag=AB25_RS13430;old_locus_tag=AB25_2435 NZ_JJMC01000041.1 Protein Homology CDS 103644 104609 . + 0 ID=cds-WP_000011957.1;Parent=gene-AB25_RS13430;Dbxref=GenBank:WP_000011957.1;Name=WP_000011957.1;Ontology_term=GO:0005975,GO:0016301;gbkey=CDS;gene=yegV;go_function=kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416603.1;locus_tag=AB25_RS13430;product=carbohydrate kinase family protein;protein_id=WP_000011957.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 104583 105329 . - . ID=gene-AB25_RS13425;Name=yegW;gbkey=Gene;gene=yegW;gene_biotype=protein_coding;locus_tag=AB25_RS13425;old_locus_tag=AB25_2436 NZ_JJMC01000041.1 Protein Homology CDS 104583 105329 . - 0 ID=cds-WP_000434038.1;Parent=gene-AB25_RS13425;Dbxref=GenBank:WP_000434038.1;Name=WP_000434038.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=yegW;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310931.1;locus_tag=AB25_RS13425;product=GntR family transcriptional regulator;protein_id=WP_000434038.1;transl_table=11 NZ_JJMC01000041.1 RefSeq pseudogene 105381 106203 . - . ID=gene-AB25_RS31190;Name=yegX;gbkey=Gene;gene=yegX;gene_biotype=pseudogene;locus_tag=AB25_RS31190;pseudo=true NZ_JJMC01000041.1 Protein Homology CDS 105381 106203 . - 0 ID=cds-AB25_RS31190;Parent=gene-AB25_RS31190;Note=frameshifted;gbkey=CDS;gene=yegX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416605.2;locus_tag=AB25_RS31190;product=glycoside hydrolase family 25 protein;pseudo=true;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 106268 107068 . - . ID=gene-AB25_RS13415;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=AB25_RS13415;old_locus_tag=AB25_2439 NZ_JJMC01000041.1 Protein Homology CDS 106268 107068 . - 0 ID=cds-WP_000822274.1;Parent=gene-AB25_RS13415;Dbxref=GenBank:WP_000822274.1;Name=WP_000822274.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416606.1;locus_tag=AB25_RS13415;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_000822274.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 107065 107853 . - . ID=gene-AB25_RS13410;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=AB25_RS13410;old_locus_tag=AB25_2440 NZ_JJMC01000041.1 Protein Homology CDS 107065 107853 . - 0 ID=cds-WP_001195605.1;Parent=gene-AB25_RS13410;Dbxref=GenBank:WP_001195605.1;Name=WP_001195605.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707990.1;locus_tag=AB25_RS13410;product=hydroxyethylthiazole kinase;protein_id=WP_001195605.1;transl_table=11 NZ_JJMC01000041.1 cmsearch riboswitch 107888 107984 . - . ID=id-NZ_JJMC01000041.1:107888..107984;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JJMC01000041.1 RefSeq gene 108076 108348 . - . ID=gene-AB25_RS13405;Name=rcnR;gbkey=Gene;gene=rcnR;gene_biotype=protein_coding;locus_tag=AB25_RS13405;old_locus_tag=AB25_2441 NZ_JJMC01000041.1 Protein Homology CDS 108076 108348 . - 0 ID=cds-WP_000019944.1;Parent=gene-AB25_RS13405;Dbxref=GenBank:WP_000019944.1;Name=WP_000019944.1;gbkey=CDS;gene=rcnR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310938.1;locus_tag=AB25_RS13405;product=Ni(II)/Co(II)-binding transcriptional repressor RcnR;protein_id=WP_000019944.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 108469 109293 . + . ID=gene-AB25_RS13400;Name=rcnA;gbkey=Gene;gene=rcnA;gene_biotype=protein_coding;locus_tag=AB25_RS13400;old_locus_tag=AB25_2442 NZ_JJMC01000041.1 Protein Homology CDS 108469 109293 . + 0 ID=cds-WP_032170950.1;Parent=gene-AB25_RS13400;Dbxref=GenBank:WP_032170950.1;Name=WP_032170950.1;gbkey=CDS;gene=rcnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416609.1;locus_tag=AB25_RS13400;product=nickel/cobalt efflux protein RcnA;protein_id=WP_032170950.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 109512 109850 . + . ID=gene-AB25_RS13395;Name=rcnB;gbkey=Gene;gene=rcnB;gene_biotype=protein_coding;locus_tag=AB25_RS13395;old_locus_tag=AB25_2443 NZ_JJMC01000041.1 Protein Homology CDS 109512 109850 . + 0 ID=cds-WP_000153074.1;Parent=gene-AB25_RS13395;Dbxref=GenBank:WP_000153074.1;Name=WP_000153074.1;gbkey=CDS;gene=rcnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707992.1;locus_tag=AB25_RS13395;product=Ni(II)/Co(II) efflux transporter accessory subunit RcnB;protein_id=WP_000153074.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 109932 110966 . - . ID=gene-AB25_RS13390;Name=yehA;gbkey=Gene;gene=yehA;gene_biotype=protein_coding;locus_tag=AB25_RS13390;old_locus_tag=AB25_2444 NZ_JJMC01000041.1 Protein Homology CDS 109932 110966 . - 0 ID=cds-WP_000405687.1;Parent=gene-AB25_RS13390;Dbxref=GenBank:WP_000405687.1;Name=WP_000405687.1;gbkey=CDS;gene=yehA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416611.1;locus_tag=AB25_RS13390;product=putative fimbrial-like adhesin protein;protein_id=WP_000405687.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 110982 113462 . - . ID=gene-AB25_RS13385;Name=yehB;gbkey=Gene;gene=yehB;gene_biotype=protein_coding;locus_tag=AB25_RS13385;old_locus_tag=AB25_2445 NZ_JJMC01000041.1 Protein Homology CDS 110982 113462 . - 0 ID=cds-WP_000945467.1;Parent=gene-AB25_RS13385;Dbxref=GenBank:WP_000945467.1;Name=WP_000945467.1;gbkey=CDS;gene=yehB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416612.1;locus_tag=AB25_RS13385;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_000945467.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 113478 114152 . - . ID=gene-AB25_RS13380;Name=yehC;gbkey=Gene;gene=yehC;gene_biotype=protein_coding;locus_tag=AB25_RS13380;old_locus_tag=AB25_2446 NZ_JJMC01000041.1 Protein Homology CDS 113478 114152 . - 0 ID=cds-WP_000677395.1;Parent=gene-AB25_RS13380;Dbxref=GenBank:WP_000677395.1;Name=WP_000677395.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;gene=yehC;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310943.1;locus_tag=AB25_RS13380;product=fimbria/pilus periplasmic chaperone;protein_id=WP_000677395.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 114232 114774 . - . ID=gene-AB25_RS13375;Name=yehD;gbkey=Gene;gene=yehD;gene_biotype=protein_coding;locus_tag=AB25_RS13375;old_locus_tag=AB25_2447 NZ_JJMC01000041.1 Protein Homology CDS 114232 114774 . - 0 ID=cds-WP_000830468.1;Parent=gene-AB25_RS13375;Dbxref=GenBank:WP_000830468.1;Name=WP_000830468.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=yehD;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707997.1;locus_tag=AB25_RS13375;product=fimbrial protein;protein_id=WP_000830468.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 115067 115348 . - . ID=gene-AB25_RS0125545;Name=yehE;gbkey=Gene;gene=yehE;gene_biotype=protein_coding;locus_tag=AB25_RS0125545 NZ_JJMC01000041.1 Protein Homology CDS 115067 115348 . - 0 ID=cds-WP_001700837.1;Parent=gene-AB25_RS0125545;Dbxref=GenBank:WP_001700837.1;Name=WP_001700837.1;gbkey=CDS;gene=yehE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439264.1;locus_tag=AB25_RS0125545;product=YehE family protein;protein_id=WP_001700837.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 115611 116720 . - . ID=gene-AB25_RS13370;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=AB25_RS13370;old_locus_tag=AB25_2449 NZ_JJMC01000041.1 Protein Homology CDS 115611 116720 . - 0 ID=cds-WP_001005448.1;Parent=gene-AB25_RS13370;Dbxref=GenBank:WP_001005448.1;Name=WP_001005448.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310946.2;locus_tag=AB25_RS13370;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_001005448.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 116852 118885 . + . ID=gene-AB25_RS13365;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=AB25_RS13365;old_locus_tag=AB25_2450 NZ_JJMC01000041.1 Protein Homology CDS 116852 118885 . + 0 ID=cds-WP_001295427.1;Parent=gene-AB25_RS13365;Dbxref=GenBank:WP_001295427.1;Name=WP_001295427.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310947.1;locus_tag=AB25_RS13365;product=methionine--tRNA ligase;protein_id=WP_001295427.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 119026 122820 . + . ID=gene-AB25_RS13360;Name=AB25_RS13360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS13360;old_locus_tag=AB25_2451 NZ_JJMC01000041.1 Protein Homology CDS 119026 122820 . + 0 ID=cds-WP_032170953.1;Parent=gene-AB25_RS13360;Dbxref=GenBank:WP_032170953.1;Name=WP_032170953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001215568.1;locus_tag=AB25_RS13360;product=DUF4132 domain-containing protein;protein_id=WP_032170953.1;transl_table=11 NZ_JJMC01000041.1 RefSeq pseudogene 122830 126462 . + . ID=gene-AB25_RS0125550;Name=yehI;gbkey=Gene;gene=yehI;gene_biotype=pseudogene;locus_tag=AB25_RS0125550;pseudo=true NZ_JJMC01000041.1 Protein Homology CDS 122830 126462 . + 0 ID=cds-AB25_RS0125550;Parent=gene-AB25_RS0125550;Note=internal stop;gbkey=CDS;gene=yehI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416621.1;locus_tag=AB25_RS0125550;product=DUF4132 domain-containing protein YehI;pseudo=true;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 126523 126840 . + . ID=gene-AB25_RS0125555;Name=yehK;gbkey=Gene;gene=yehK;gene_biotype=protein_coding;locus_tag=AB25_RS0125555 NZ_JJMC01000041.1 Protein Homology CDS 126523 126840 . + 0 ID=cds-WP_000636925.1;Parent=gene-AB25_RS0125555;Dbxref=GenBank:WP_000636925.1;Name=WP_000636925.1;gbkey=CDS;gene=yehK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588459.1;locus_tag=AB25_RS0125555;product=protein YehK;protein_id=WP_000636925.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 127147 128235 . + . ID=gene-AB25_RS13355;Name=yehL;gbkey=Gene;gene=yehL;gene_biotype=protein_coding;locus_tag=AB25_RS13355;old_locus_tag=AB25_2454 NZ_JJMC01000041.1 Protein Homology CDS 127147 128235 . + 0 ID=cds-WP_000074859.1;Parent=gene-AB25_RS13355;Dbxref=GenBank:WP_000074859.1;Name=WP_000074859.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yehL;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310954.2;locus_tag=AB25_RS13355;product=ATP-binding protein;protein_id=WP_000074859.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 128246 130525 . + . ID=gene-AB25_RS13350;Name=yehM;gbkey=Gene;gene=yehM;gene_biotype=protein_coding;locus_tag=AB25_RS13350;old_locus_tag=AB25_2455 NZ_JJMC01000041.1 Protein Homology CDS 128246 130525 . + 0 ID=cds-WP_001294366.1;Parent=gene-AB25_RS13350;Dbxref=GenBank:WP_001294366.1;Name=WP_001294366.1;gbkey=CDS;gene=yehM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416624.1;locus_tag=AB25_RS13350;product=DUF5682 family protein;protein_id=WP_001294366.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 130518 131654 . + . ID=gene-AB25_RS13345;Name=yehP;gbkey=Gene;gene=yehP;gene_biotype=protein_coding;locus_tag=AB25_RS13345;old_locus_tag=AB25_2456 NZ_JJMC01000041.1 Protein Homology CDS 130518 131654 . + 0 ID=cds-WP_001292773.1;Parent=gene-AB25_RS13345;Dbxref=GenBank:WP_001292773.1;Name=WP_001292773.1;gbkey=CDS;gene=yehP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416625.1;locus_tag=AB25_RS13345;product=vWA domain-containing protein;protein_id=WP_001292773.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 131651 133651 . + . ID=gene-AB25_RS13340;Name=yehQ;gbkey=Gene;gene=yehQ;gene_biotype=protein_coding;locus_tag=AB25_RS13340;old_locus_tag=AB25_2457 NZ_JJMC01000041.1 Protein Homology CDS 131651 133651 . + 0 ID=cds-WP_032170956.1;Parent=gene-AB25_RS13340;Dbxref=GenBank:WP_032170956.1;Name=WP_032170956.1;Ontology_term=GO:0008270;gbkey=CDS;gene=yehQ;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708010.2;locus_tag=AB25_RS13340;product=SWIM zinc finger family protein;protein_id=WP_032170956.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 133776 134237 . + . ID=gene-AB25_RS13335;Name=yehR;gbkey=Gene;gene=yehR;gene_biotype=protein_coding;locus_tag=AB25_RS13335;old_locus_tag=AB25_2458 NZ_JJMC01000041.1 Protein Homology CDS 133776 134237 . + 0 ID=cds-WP_001295429.1;Parent=gene-AB25_RS13335;Dbxref=GenBank:WP_001295429.1;Name=WP_001295429.1;gbkey=CDS;gene=yehR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416627.2;locus_tag=AB25_RS13335;product=YehR family lipoprotein;protein_id=WP_001295429.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 134278 134748 . - . ID=gene-AB25_RS13330;Name=yehS;gbkey=Gene;gene=yehS;gene_biotype=protein_coding;locus_tag=AB25_RS13330;old_locus_tag=AB25_2459 NZ_JJMC01000041.1 Protein Homology CDS 134278 134748 . - 0 ID=cds-WP_001295430.1;Parent=gene-AB25_RS13330;Dbxref=GenBank:WP_001295430.1;Name=WP_001295430.1;gbkey=CDS;gene=yehS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310962.1;locus_tag=AB25_RS13330;product=DUF1456 family protein;protein_id=WP_001295430.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 134795 135514 . - . ID=gene-AB25_RS13325;Name=btsR;gbkey=Gene;gene=btsR;gene_biotype=protein_coding;gene_synonym=yehT;locus_tag=AB25_RS13325;old_locus_tag=AB25_2460 NZ_JJMC01000041.1 Protein Homology CDS 134795 135514 . - 0 ID=cds-WP_000598641.1;Parent=gene-AB25_RS13325;Dbxref=GenBank:WP_000598641.1;Name=WP_000598641.1;gbkey=CDS;gene=btsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310963.2;locus_tag=AB25_RS13325;product=two-component system response regulator BtsR;protein_id=WP_000598641.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 135511 137196 . - . ID=gene-AB25_RS13320;Name=btsS;gbkey=Gene;gene=btsS;gene_biotype=protein_coding;locus_tag=AB25_RS13320;old_locus_tag=AB25_2461 NZ_JJMC01000041.1 Protein Homology CDS 135511 137196 . - 0 ID=cds-WP_001295431.1;Parent=gene-AB25_RS13320;Dbxref=GenBank:WP_001295431.1;Name=WP_001295431.1;gbkey=CDS;gene=btsS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416630.1;locus_tag=AB25_RS13320;product=two-component regulatory system sensor histidine kinase BtsS;protein_id=WP_001295431.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 137418 138149 . + . ID=gene-AB25_RS13315;Name=mlrA;gbkey=Gene;gene=mlrA;gene_biotype=protein_coding;locus_tag=AB25_RS13315;old_locus_tag=AB25_2462 NZ_JJMC01000041.1 Protein Homology CDS 137418 138149 . + 0 ID=cds-WP_032170957.1;Parent=gene-AB25_RS13315;Dbxref=GenBank:WP_032170957.1;Name=WP_032170957.1;gbkey=CDS;gene=mlrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416631.1;locus_tag=AB25_RS13315;product=HTH-type transcriptional regulator MlrA;protein_id=WP_032170957.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 138209 138316 . + . ID=gene-AB25_RS0125560;Name=yohO;gbkey=Gene;gene=yohO;gene_biotype=protein_coding;locus_tag=AB25_RS0125560 NZ_JJMC01000041.1 Protein Homology CDS 138209 138316 . + 0 ID=cds-WP_001216963.1;Parent=gene-AB25_RS0125560;Dbxref=GenBank:WP_001216963.1;Name=WP_001216963.1;gbkey=CDS;gene=yohO;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588460.1;locus_tag=AB25_RS0125560;product=protein YohO;protein_id=WP_001216963.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 138297 139028 . - . ID=gene-AB25_RS13310;Name=yehW;gbkey=Gene;gene=yehW;gene_biotype=protein_coding;locus_tag=AB25_RS13310;old_locus_tag=AB25_2463 NZ_JJMC01000041.1 Protein Homology CDS 138297 139028 . - 0 ID=cds-WP_000783120.1;Parent=gene-AB25_RS13310;Dbxref=GenBank:WP_000783120.1;Name=WP_000783120.1;gbkey=CDS;gene=yehW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311042.1;locus_tag=AB25_RS13310;product=glycine betaine ABC transporter permease YehW;protein_id=WP_000783120.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 139033 139959 . - . ID=gene-AB25_RS13305;Name=yehX;gbkey=Gene;gene=yehX;gene_biotype=protein_coding;locus_tag=AB25_RS13305;old_locus_tag=AB25_2464 NZ_JJMC01000041.1 Protein Homology CDS 139033 139959 . - 0 ID=cds-WP_000569361.1;Parent=gene-AB25_RS13305;Dbxref=GenBank:WP_000569361.1;Name=WP_000569361.1;gbkey=CDS;gene=yehX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708030.1;locus_tag=AB25_RS13305;product=glycine betaine ABC transporter ATP binding protein YehX;protein_id=WP_000569361.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 139952 141109 . - . ID=gene-AB25_RS13300;Name=yehY;gbkey=Gene;gene=yehY;gene_biotype=protein_coding;locus_tag=AB25_RS13300;old_locus_tag=AB25_2465 NZ_JJMC01000041.1 Protein Homology CDS 139952 141109 . - 0 ID=cds-WP_000221821.1;Parent=gene-AB25_RS13300;Dbxref=GenBank:WP_000221821.1;Name=WP_000221821.1;gbkey=CDS;gene=yehY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416634.1;locus_tag=AB25_RS13300;product=glycine betaine ABC transporter permease YehY;protein_id=WP_000221821.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 141116 142033 . - . ID=gene-AB25_RS13295;Name=osmF;gbkey=Gene;gene=osmF;gene_biotype=protein_coding;locus_tag=AB25_RS13295;old_locus_tag=AB25_2466 NZ_JJMC01000041.1 Protein Homology CDS 141116 142033 . - 0 ID=cds-WP_001130306.1;Parent=gene-AB25_RS13295;Dbxref=GenBank:WP_001130306.1;Name=WP_001130306.1;Ontology_term=GO:0031460,GO:0022857;gbkey=CDS;gene=osmF;go_function=transmembrane transporter activity|0022857||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416635.1;locus_tag=AB25_RS13295;product=glycine betaine ABC transporter substrate-binding protein OsmF;protein_id=WP_001130306.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 142244 144541 . - . ID=gene-AB25_RS13290;Name=bglX;gbkey=Gene;gene=bglX;gene_biotype=protein_coding;locus_tag=AB25_RS13290;old_locus_tag=AB25_2467 NZ_JJMC01000041.1 Protein Homology CDS 142244 144541 . - 0 ID=cds-WP_000871517.1;Parent=gene-AB25_RS13290;Dbxref=GenBank:WP_000871517.1;Name=WP_000871517.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bglX;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416636.1;locus_tag=AB25_RS13290;product=beta-glucosidase BglX;protein_id=WP_000871517.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 144737 146452 . + . ID=gene-AB25_RS13285;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=AB25_RS13285;old_locus_tag=AB25_2468 NZ_JJMC01000041.1 Protein Homology CDS 144737 146452 . + 0 ID=cds-WP_000097369.1;Parent=gene-AB25_RS13285;Dbxref=GenBank:WP_000097369.1;Name=WP_000097369.1;Ontology_term=GO:0006089,GO:0016901;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311047.1;locus_tag=AB25_RS13285;product=D-lactate dehydrogenase;protein_id=WP_000097369.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 146490 147422 . - . ID=gene-AB25_RS13280;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=AB25_RS13280;old_locus_tag=AB25_2469 NZ_JJMC01000041.1 Protein Homology CDS 146490 147422 . - 0 ID=cds-WP_001319943.1;Parent=gene-AB25_RS13280;Dbxref=GenBank:WP_001319943.1;Name=WP_001319943.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416638.4;locus_tag=AB25_RS13280;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_001319943.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 147596 148183 . - . ID=gene-AB25_RS13275;Name=yohC;gbkey=Gene;gene=yohC;gene_biotype=protein_coding;locus_tag=AB25_RS13275;old_locus_tag=AB25_2471 NZ_JJMC01000041.1 Protein Homology CDS 147596 148183 . - 0 ID=cds-WP_001295454.1;Parent=gene-AB25_RS13275;Dbxref=GenBank:WP_001295454.1;Name=WP_001295454.1;Ontology_term=GO:0016192,GO:0031267;gbkey=CDS;gene=yohC;go_function=small GTPase binding|0031267||IEA;go_process=vesicle-mediated transport|0016192||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170891.1;locus_tag=AB25_RS13275;product=Yip1 family protein;protein_id=WP_001295454.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 148353 148931 . + . ID=gene-AB25_RS13270;Name=yohD;gbkey=Gene;gene=yohD;gene_biotype=protein_coding;locus_tag=AB25_RS13270;old_locus_tag=AB25_2472 NZ_JJMC01000041.1 Protein Homology CDS 148353 148931 . + 0 ID=cds-WP_001296821.1;Parent=gene-AB25_RS13270;Dbxref=GenBank:WP_001296821.1;Name=WP_001296821.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yohD;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416640.2;locus_tag=AB25_RS13270;product=DedA family protein;protein_id=WP_001296821.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 149061 149822 . - . ID=gene-AB25_RS13265;Name=yohF;gbkey=Gene;gene=yohF;gene_biotype=protein_coding;locus_tag=AB25_RS13265;old_locus_tag=AB25_2473 NZ_JJMC01000041.1 Protein Homology CDS 149061 149822 . - 0 ID=cds-WP_000079526.1;Parent=gene-AB25_RS13265;Dbxref=GenBank:WP_000079526.1;Name=WP_000079526.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yohF;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311051.1;locus_tag=AB25_RS13265;product=SDR family oxidoreductase;protein_id=WP_000079526.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 149875 151311 . - . ID=gene-AB25_RS13260;Name=mdtQ;gbkey=Gene;gene=mdtQ;gene_biotype=protein_coding;locus_tag=AB25_RS13260;old_locus_tag=AB25_2474 NZ_JJMC01000041.1 Protein Homology CDS 149875 151311 . - 0 ID=cds-WP_001078114.1;Parent=gene-AB25_RS13260;Dbxref=GenBank:WP_001078114.1;Name=WP_001078114.1;Ontology_term=GO:0055085,GO:0015562,GO:0016020;gbkey=CDS;gene=mdtQ;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001583680.1;locus_tag=AB25_RS13260;product=multidrug resistance outer membrane protein MdtQ;protein_id=WP_001078114.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 151535 151618 . + . ID=gene-AB25_RS0125565;Name=yohP;gbkey=Gene;gene=yohP;gene_biotype=protein_coding;locus_tag=AB25_RS0125565 NZ_JJMC01000041.1 Protein Homology CDS 151535 151618 . + 0 ID=cds-WP_000691708.1;Parent=gene-AB25_RS0125565;Dbxref=GenBank:WP_000691708.1;Name=WP_000691708.1;gbkey=CDS;gene=yohP;inference=COORDINATES: protein motif:HMM:NF011345.0;locus_tag=AB25_RS0125565;product=small membrane protein YohP;protein_id=WP_000691708.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 151989 152936 . - . ID=gene-AB25_RS13255;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;locus_tag=AB25_RS13255;old_locus_tag=AB25_2475 NZ_JJMC01000041.1 Protein Homology CDS 151989 152936 . - 0 ID=cds-WP_001264866.1;Parent=gene-AB25_RS13255;Dbxref=GenBank:WP_001264866.1;Name=WP_001264866.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusC;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416645.1;locus_tag=AB25_RS13255;product=tRNA dihydrouridine(16) synthase DusC;protein_id=WP_001264866.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 153175 153573 . + . ID=gene-AB25_RS13250;Name=yohJ;gbkey=Gene;gene=yohJ;gene_biotype=protein_coding;locus_tag=AB25_RS13250;old_locus_tag=AB25_2476 NZ_JJMC01000041.1 Protein Homology CDS 153175 153573 . + 0 ID=cds-WP_001295452.1;Parent=gene-AB25_RS13250;Dbxref=GenBank:WP_001295452.1;Name=WP_001295452.1;gbkey=CDS;gene=yohJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416646.1;locus_tag=AB25_RS13250;product=CidA/LrgA family protein;protein_id=WP_001295452.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 153570 154265 . + . ID=gene-AB25_RS13245;Name=yohK;gbkey=Gene;gene=yohK;gene_biotype=protein_coding;locus_tag=AB25_RS13245;old_locus_tag=AB25_2477 NZ_JJMC01000041.1 Protein Homology CDS 153570 154265 . + 0 ID=cds-WP_000968208.1;Parent=gene-AB25_RS13245;Dbxref=GenBank:WP_000968208.1;Name=WP_000968208.1;gbkey=CDS;gene=yohK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416647.1;locus_tag=AB25_RS13245;product=CidB/LrgB family autolysis modulator;protein_id=WP_000968208.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 154395 155279 . + . ID=gene-AB25_RS13240;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=AB25_RS13240;old_locus_tag=AB25_2478 NZ_JJMC01000041.1 Protein Homology CDS 154395 155279 . + 0 ID=cds-WP_000553564.1;Parent=gene-AB25_RS13240;Dbxref=GenBank:WP_000553564.1;Name=WP_000553564.1;Ontology_term=GO:0009972,GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=cytidine deamination|0009972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416648.1;locus_tag=AB25_RS13240;product=cytidine deaminase;protein_id=WP_000553564.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 155429 156148 . + . ID=gene-AB25_RS13235;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=AB25_RS13235;old_locus_tag=AB25_2479 NZ_JJMC01000041.1 Protein Homology CDS 155429 156148 . + 0 ID=cds-WP_000920064.1;Parent=gene-AB25_RS13235;Dbxref=GenBank:WP_000920064.1;Name=WP_000920064.1;gbkey=CDS;gene=sanA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311063.1;locus_tag=AB25_RS13235;product=outer membrane permeability protein SanA;protein_id=WP_000920064.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 156151 156390 . + . ID=gene-AB25_RS13230;Name=yeiS;gbkey=Gene;gene=yeiS;gene_biotype=protein_coding;locus_tag=AB25_RS13230;old_locus_tag=AB25_2480 NZ_JJMC01000041.1 Protein Homology CDS 156151 156390 . + 0 ID=cds-WP_000383096.1;Parent=gene-AB25_RS13230;Dbxref=GenBank:WP_000383096.1;Name=WP_000383096.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yeiS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311064.1;locus_tag=AB25_RS13230;product=DUF2542 family protein;protein_id=WP_000383096.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 156709 157947 . + . ID=gene-AB25_RS13225;Name=preT;gbkey=Gene;gene=preT;gene_biotype=protein_coding;locus_tag=AB25_RS13225;old_locus_tag=AB25_2481 NZ_JJMC01000041.1 Protein Homology CDS 156709 157947 . + 0 ID=cds-WP_032170958.1;Parent=gene-AB25_RS13225;Dbxref=GenBank:WP_032170958.1;Name=WP_032170958.1;gbkey=CDS;gene=preT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416651.1;locus_tag=AB25_RS13225;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreT;protein_id=WP_032170958.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 157941 159176 . + . ID=gene-AB25_RS13220;Name=preA;gbkey=Gene;gene=preA;gene_biotype=protein_coding;locus_tag=AB25_RS13220;old_locus_tag=AB25_2482 NZ_JJMC01000041.1 Protein Homology CDS 157941 159176 . + 0 ID=cds-WP_000956045.1;Parent=gene-AB25_RS13220;Dbxref=GenBank:WP_000956045.1;Name=WP_000956045.1;Ontology_term=GO:0006210,GO:0006212,GO:0017113;gbkey=CDS;gene=preA;go_function=dihydropyrimidine dehydrogenase (NADP+) activity|0017113||IEA;go_process=thymine catabolic process|0006210||IEA,uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416652.4;locus_tag=AB25_RS13220;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;protein_id=WP_000956045.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 159247 160257 . - . ID=gene-AB25_RS13215;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=AB25_RS13215;old_locus_tag=AB25_2483 NZ_JJMC01000041.1 Protein Homology CDS 159247 160257 . - 0 ID=cds-WP_001275118.1;Parent=gene-AB25_RS13215;Dbxref=GenBank:WP_001275118.1;Name=WP_001275118.1;Ontology_term=GO:0008643,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mglC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129205.1;locus_tag=AB25_RS13215;product=galactose/methyl galactoside ABC transporter permease MglC;protein_id=WP_001275118.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 160273 161793 . - . ID=gene-AB25_RS13210;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=protein_coding;locus_tag=AB25_RS13210;old_locus_tag=AB25_2484 NZ_JJMC01000041.1 Protein Homology CDS 160273 161793 . - 0 ID=cds-WP_000255039.1;Parent=gene-AB25_RS13210;Dbxref=GenBank:WP_000255039.1;Name=WP_000255039.1;Ontology_term=GO:0008643,GO:0005524,GO:0043211,GO:0016020;gbkey=CDS;gene=mglA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type carbohydrate transporter activity|0043211||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883197.1;locus_tag=AB25_RS13210;product=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;protein_id=WP_000255039.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 161854 162852 . - . ID=gene-AB25_RS13205;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=AB25_RS13205;old_locus_tag=AB25_2485 NZ_JJMC01000041.1 Protein Homology CDS 161854 162852 . - 0 ID=cds-WP_001036964.1;Parent=gene-AB25_RS13205;Dbxref=GenBank:WP_001036964.1;Name=WP_001036964.1;Ontology_term=GO:0030246;gbkey=CDS;gene=mglB;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416655.1;locus_tag=AB25_RS13205;product=galactose/glucose ABC transporter substrate-binding protein MglB;protein_id=WP_001036964.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 163132 164172 . - . ID=gene-AB25_RS13200;Name=galS;gbkey=Gene;gene=galS;gene_biotype=protein_coding;locus_tag=AB25_RS13200;old_locus_tag=AB25_2486 NZ_JJMC01000041.1 Protein Homology CDS 163132 164172 . - 0 ID=cds-WP_000628659.1;Parent=gene-AB25_RS13200;Dbxref=GenBank:WP_000628659.1;Name=WP_000628659.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708050.2;locus_tag=AB25_RS13200;product=HTH-type transcriptional regulator GalS;protein_id=WP_000628659.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 164314 165471 . - . ID=gene-AB25_RS13195;Name=yeiB;gbkey=Gene;gene=yeiB;gene_biotype=protein_coding;locus_tag=AB25_RS13195;old_locus_tag=AB25_2487 NZ_JJMC01000041.1 Protein Homology CDS 164314 165471 . - 0 ID=cds-WP_000440921.1;Parent=gene-AB25_RS13195;Dbxref=GenBank:WP_000440921.1;Name=WP_000440921.1;gbkey=CDS;gene=yeiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416657.1;locus_tag=AB25_RS13195;product=DUF418 domain-containing protein YeiB;protein_id=WP_000440921.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 165488 166156 . - . ID=gene-AB25_RS13190;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=AB25_RS13190;old_locus_tag=AB25_2488 NZ_JJMC01000041.1 Protein Homology CDS 165488 166156 . - 0 ID=cds-WP_001139613.1;Parent=gene-AB25_RS13190;Dbxref=GenBank:WP_001139613.1;Name=WP_001139613.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311072.1;locus_tag=AB25_RS13190;product=GTP cyclohydrolase I FolE;protein_id=WP_001139613.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 166414 167250 . + . ID=gene-AB25_RS13185;Name=yeiG;gbkey=Gene;gene=yeiG;gene_biotype=protein_coding;locus_tag=AB25_RS13185;old_locus_tag=AB25_2489 NZ_JJMC01000041.1 Protein Homology CDS 166414 167250 . + 0 ID=cds-WP_000425460.1;Parent=gene-AB25_RS13185;Dbxref=GenBank:WP_000425460.1;Name=WP_000425460.1;gbkey=CDS;gene=yeiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311073.1;locus_tag=AB25_RS13185;product=S-formylglutathione hydrolase;protein_id=WP_000425460.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 167282 169273 . - . ID=gene-AB25_RS13180;Name=cirA;gbkey=Gene;gene=cirA;gene_biotype=protein_coding;locus_tag=AB25_RS13180;old_locus_tag=AB25_2490 NZ_JJMC01000041.1 Protein Homology CDS 167282 169273 . - 0 ID=cds-WP_000489244.1;Parent=gene-AB25_RS13180;Dbxref=GenBank:WP_000489244.1;Name=WP_000489244.1;gbkey=CDS;gene=cirA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416660.1;locus_tag=AB25_RS13180;product=catecholate siderophore receptor CirA;protein_id=WP_000489244.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 169567 171036 . - . ID=gene-AB25_RS13175;Name=lysP;gbkey=Gene;gene=lysP;gene_biotype=protein_coding;locus_tag=AB25_RS13175;old_locus_tag=AB25_2491 NZ_JJMC01000041.1 Protein Homology CDS 169567 171036 . - 0 ID=cds-WP_000253273.1;Parent=gene-AB25_RS13175;Dbxref=GenBank:WP_000253273.1;Name=WP_000253273.1;gbkey=CDS;gene=lysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416661.1;locus_tag=AB25_RS13175;product=lysine-specific permease;protein_id=WP_000253273.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 171241 172122 . - . ID=gene-AB25_RS13170;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=AB25_RS13170;old_locus_tag=AB25_2493 NZ_JJMC01000041.1 Protein Homology CDS 171241 172122 . - 0 ID=cds-WP_000548294.1;Parent=gene-AB25_RS13170;Dbxref=GenBank:WP_000548294.1;Name=WP_000548294.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yieE;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311076.1;locus_tag=AB25_RS13170;product=DNA-binding transcriptional regulator YeiE;protein_id=WP_000548294.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 172221 173270 . + . ID=gene-AB25_RS13165;Name=yeiH;gbkey=Gene;gene=yeiH;gene_biotype=protein_coding;locus_tag=AB25_RS13165;old_locus_tag=AB25_2494 NZ_JJMC01000041.1 Protein Homology CDS 172221 173270 . + 0 ID=cds-WP_000182053.1;Parent=gene-AB25_RS13165;Dbxref=GenBank:WP_000182053.1;Name=WP_000182053.1;gbkey=CDS;gene=yeiH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311077.1;locus_tag=AB25_RS13165;product=YeiH family protein;protein_id=WP_000182053.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 173344 174201 . + . ID=gene-AB25_RS13160;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=AB25_RS13160;old_locus_tag=AB25_2495 NZ_JJMC01000041.1 Protein Homology CDS 173344 174201 . + 0 ID=cds-WP_000873890.1;Parent=gene-AB25_RS13160;Dbxref=GenBank:WP_000873890.1;Name=WP_000873890.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=nfo;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311078.1;locus_tag=AB25_RS13160;product=deoxyribonuclease IV;protein_id=WP_000873890.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 174204 175292 . + . ID=gene-AB25_RS13155;Name=yeiI;gbkey=Gene;gene=yeiI;gene_biotype=protein_coding;locus_tag=AB25_RS13155;old_locus_tag=AB25_2496 NZ_JJMC01000041.1 Protein Homology CDS 174204 175292 . + 0 ID=cds-WP_001064972.1;Parent=gene-AB25_RS13155;Dbxref=GenBank:WP_001064972.1;Name=WP_001064972.1;gbkey=CDS;gene=yeiI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311079.1;locus_tag=AB25_RS13155;product=sugar kinase;protein_id=WP_001064972.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 175348 176598 . - . ID=gene-AB25_RS13150;Name=nupX;gbkey=Gene;gene=nupX;gene_biotype=protein_coding;locus_tag=AB25_RS13150;old_locus_tag=AB25_2497 NZ_JJMC01000041.1 Protein Homology CDS 175348 176598 . - 0 ID=cds-WP_000382944.1;Parent=gene-AB25_RS13150;Dbxref=GenBank:WP_000382944.1;Name=WP_000382944.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;gene=nupX;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416666.1;locus_tag=AB25_RS13150;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_000382944.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 176698 177639 . - . ID=gene-AB25_RS13145;Name=rihB;gbkey=Gene;gene=rihB;gene_biotype=protein_coding;locus_tag=AB25_RS13145;old_locus_tag=AB25_2498 NZ_JJMC01000041.1 Protein Homology CDS 176698 177639 . - 0 ID=cds-WP_000415455.1;Parent=gene-AB25_RS13145;Dbxref=GenBank:WP_000415455.1;Name=WP_000415455.1;gbkey=CDS;gene=rihB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416667.1;locus_tag=AB25_RS13145;product=ribosylpyrimidine nucleosidase;protein_id=WP_000415455.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 177769 178467 . + . ID=gene-AB25_RS13140;Name=yeiL;gbkey=Gene;gene=yeiL;gene_biotype=protein_coding;locus_tag=AB25_RS13140;old_locus_tag=AB25_2499 NZ_JJMC01000041.1 Protein Homology CDS 177769 178467 . + 0 ID=cds-WP_000658565.1;Parent=gene-AB25_RS13140;Dbxref=GenBank:WP_000658565.1;Name=WP_000658565.1;gbkey=CDS;gene=yeiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311082.4;locus_tag=AB25_RS13140;product=transcriptional regulator YeiL;protein_id=WP_000658565.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 178664 179914 . - . ID=gene-AB25_RS13135;Name=psuT;gbkey=Gene;gene=psuT;gene_biotype=protein_coding;locus_tag=AB25_RS13135;old_locus_tag=AB25_2500 NZ_JJMC01000041.1 Protein Homology CDS 178664 179914 . - 0 ID=cds-WP_000353883.1;Parent=gene-AB25_RS13135;Dbxref=GenBank:WP_000353883.1;Name=WP_000353883.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;gene=psuT;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416669.1;locus_tag=AB25_RS13135;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_000353883.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 180008 180946 . - . ID=gene-AB25_RS13130;Name=psuG;gbkey=Gene;gene=psuG;gene_biotype=protein_coding;locus_tag=AB25_RS13130;old_locus_tag=AB25_2501 NZ_JJMC01000041.1 Protein Homology CDS 180008 180946 . - 0 ID=cds-WP_001292454.1;Parent=gene-AB25_RS13130;Dbxref=GenBank:WP_001292454.1;Name=WP_001292454.1;gbkey=CDS;gene=psuG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311084.1;locus_tag=AB25_RS13130;product=pseudouridine-5'-phosphate glycosidase;protein_id=WP_001292454.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 180934 181875 . - . ID=gene-AB25_RS13125;Name=psuK;gbkey=Gene;gene=psuK;gene_biotype=protein_coding;locus_tag=AB25_RS13125;old_locus_tag=AB25_2502 NZ_JJMC01000041.1 Protein Homology CDS 180934 181875 . - 0 ID=cds-WP_001208134.1;Parent=gene-AB25_RS13125;Dbxref=GenBank:WP_001208134.1;Name=WP_001208134.1;gbkey=CDS;gene=psuK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708063.1;locus_tag=AB25_RS13125;product=pseudouridine kinase;protein_id=WP_001208134.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 182299 183990 . - . ID=gene-AB25_RS13120;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=AB25_RS13120;old_locus_tag=AB25_2503 NZ_JJMC01000041.1 Protein Homology CDS 182299 183990 . - 0 ID=cds-WP_032180979.1;Parent=gene-AB25_RS13120;Dbxref=GenBank:WP_032180979.1;Name=WP_032180979.1;Ontology_term=GO:0009401,GO:0008982,GO:0022877;gbkey=CDS;gene=fruA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708064.1;locus_tag=AB25_RS13120;product=PTS fructose transporter subunit IIBC;protein_id=WP_032180979.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 184007 184945 . - . ID=gene-AB25_RS13115;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=AB25_RS13115;old_locus_tag=AB25_2504 NZ_JJMC01000041.1 Protein Homology CDS 184007 184945 . - 0 ID=cds-WP_000091263.1;Parent=gene-AB25_RS13115;Dbxref=GenBank:WP_000091263.1;Name=WP_000091263.1;Ontology_term=GO:0008662,GO:0016773;gbkey=CDS;gene=fruK;go_function=1-phosphofructokinase activity|0008662||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311087.1;locus_tag=AB25_RS13115;product=1-phosphofructokinase;protein_id=WP_000091263.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 184945 186075 . - . ID=gene-AB25_RS13110;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=protein_coding;locus_tag=AB25_RS13110;old_locus_tag=AB25_2505 NZ_JJMC01000041.1 Protein Homology CDS 184945 186075 . - 0 ID=cds-WP_000487247.1;Parent=gene-AB25_RS13110;Dbxref=GenBank:WP_000487247.1;Name=WP_000487247.1;gbkey=CDS;gene=fruB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311088.1;locus_tag=AB25_RS13110;product=fused PTS fructose transporter subunit IIA/HPr protein;protein_id=WP_000487247.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 186443 187624 . + . ID=gene-AB25_RS13105;Name=setB;gbkey=Gene;gene=setB;gene_biotype=protein_coding;locus_tag=AB25_RS13105;old_locus_tag=AB25_2507 NZ_JJMC01000041.1 Protein Homology CDS 186443 187624 . + 0 ID=cds-WP_000551977.1;Parent=gene-AB25_RS13105;Dbxref=GenBank:WP_000551977.1;Name=WP_000551977.1;Ontology_term=GO:0008643,GO:0055085,GO:0005351,GO:0022857,GO:0016020;gbkey=CDS;gene=setB;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311089.1;locus_tag=AB25_RS13105;product=sugar efflux transporter SetB;protein_id=WP_000551977.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 187621 187875 . - . ID=gene-AB25_RS0125580;Name=yeiW;gbkey=Gene;gene=yeiW;gene_biotype=protein_coding;locus_tag=AB25_RS0125580;old_locus_tag=AB25_2508 NZ_JJMC01000041.1 Protein Homology CDS 187621 187875 . - 0 ID=cds-WP_000389030.1;Parent=gene-AB25_RS0125580;Dbxref=GenBank:WP_000389030.1;Name=WP_000389030.1;Ontology_term=GO:0051536;gbkey=CDS;gene=yeiW;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588461.1;locus_tag=AB25_RS0125580;product=YkgJ family cysteine cluster protein;protein_id=WP_000389030.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 188030 188602 . + . ID=gene-AB25_RS13100;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=AB25_RS13100;old_locus_tag=AB25_2510 NZ_JJMC01000041.1 Protein Homology CDS 188030 188602 . + 0 ID=cds-WP_001136827.1;Parent=gene-AB25_RS13100;Dbxref=GenBank:WP_001136827.1;Name=WP_001136827.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007750416.1;locus_tag=AB25_RS13100;product=elongation factor P-like protein YeiP;protein_id=WP_001136827.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 188825 190291 . + . ID=gene-AB25_RS13095;Name=yeiQ;gbkey=Gene;gene=yeiQ;gene_biotype=protein_coding;locus_tag=AB25_RS13095;old_locus_tag=AB25_2511 NZ_JJMC01000041.1 Protein Homology CDS 188825 190291 . + 0 ID=cds-WP_000848216.1;Parent=gene-AB25_RS13095;Dbxref=GenBank:WP_000848216.1;Name=WP_000848216.1;Ontology_term=GO:0016616;gbkey=CDS;gene=yeiQ;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416677.1;locus_tag=AB25_RS13095;product=mannitol dehydrogenase family protein;protein_id=WP_000848216.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 190409 191395 . + . ID=gene-AB25_RS13090;Name=yeiR;gbkey=Gene;gene=yeiR;gene_biotype=protein_coding;locus_tag=AB25_RS13090;old_locus_tag=AB25_2512 NZ_JJMC01000041.1 Protein Homology CDS 190409 191395 . + 0 ID=cds-WP_001392373.1;Parent=gene-AB25_RS13090;Dbxref=GenBank:WP_001392373.1;Name=WP_001392373.1;gbkey=CDS;gene=yeiR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708072.1;locus_tag=AB25_RS13090;product=zinc-binding GTPase YeiR;protein_id=WP_001392373.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 191434 192147 . + . ID=gene-AB25_RS13085;Name=lpxT;gbkey=Gene;gene=lpxT;gene_biotype=protein_coding;locus_tag=AB25_RS13085;old_locus_tag=AB25_2513 NZ_JJMC01000041.1 Protein Homology CDS 191434 192147 . + 0 ID=cds-WP_001296828.1;Parent=gene-AB25_RS13085;Dbxref=GenBank:WP_001296828.1;Name=WP_001296828.1;gbkey=CDS;gene=lpxT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311093.2;locus_tag=AB25_RS13085;product=Kdo(2)-lipid A phosphotransferase;protein_id=WP_001296828.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 192559 193125 . + . ID=gene-AB25_RS13080;Name=mepS;gbkey=Gene;gene=mepS;gene_biotype=protein_coding;locus_tag=AB25_RS13080;old_locus_tag=AB25_2514 NZ_JJMC01000041.1 Protein Homology CDS 192559 193125 . + 0 ID=cds-WP_000241011.1;Parent=gene-AB25_RS13080;Dbxref=GenBank:WP_000241011.1;Name=WP_000241011.1;gbkey=CDS;gene=mepS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311094.1;locus_tag=AB25_RS13080;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;protein_id=WP_000241011.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 193306 194862 . + . ID=gene-AB25_RS13075;Name=pdeN;gbkey=Gene;gene=pdeN;gene_biotype=protein_coding;locus_tag=AB25_RS13075;old_locus_tag=AB25_2515 NZ_JJMC01000041.1 Protein Homology CDS 193306 194862 . + 0 ID=cds-WP_000470609.1;Parent=gene-AB25_RS13075;Dbxref=GenBank:WP_000470609.1;Name=WP_000470609.1;gbkey=CDS;gene=pdeN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416681.1;locus_tag=AB25_RS13075;product=cyclic di-GMP phosphodiesterase;protein_id=WP_000470609.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 194944 196758 . + . ID=gene-AB25_RS13070;Name=yejA;gbkey=Gene;gene=yejA;gene_biotype=protein_coding;locus_tag=AB25_RS13070;old_locus_tag=AB25_2516 NZ_JJMC01000041.1 Protein Homology CDS 194944 196758 . + 0 ID=cds-WP_000637041.1;Parent=gene-AB25_RS13070;Dbxref=GenBank:WP_000637041.1;Name=WP_000637041.1;gbkey=CDS;gene=yejA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416682.4;locus_tag=AB25_RS13070;product=extracellular solute-binding protein;protein_id=WP_000637041.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 196759 197853 . + . ID=gene-AB25_RS13065;Name=yejB;gbkey=Gene;gene=yejB;gene_biotype=protein_coding;locus_tag=AB25_RS13065;old_locus_tag=AB25_2517 NZ_JJMC01000041.1 Protein Homology CDS 196759 197853 . + 0 ID=cds-WP_000501604.1;Parent=gene-AB25_RS13065;Dbxref=GenBank:WP_000501604.1;Name=WP_000501604.1;gbkey=CDS;gene=yejB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311097.1;locus_tag=AB25_RS13065;product=microcin C ABC transporter permease YejB;protein_id=WP_000501604.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 197853 198878 . + . ID=gene-AB25_RS13060;Name=yejE;gbkey=Gene;gene=yejE;gene_biotype=protein_coding;locus_tag=AB25_RS13060;old_locus_tag=AB25_2518 NZ_JJMC01000041.1 Protein Homology CDS 197853 198878 . + 0 ID=cds-WP_001390416.1;Parent=gene-AB25_RS13060;Dbxref=GenBank:WP_001390416.1;Name=WP_001390416.1;gbkey=CDS;gene=yejE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708078.1;locus_tag=AB25_RS13060;product=ABC transporter permease;protein_id=WP_001390416.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 198880 200469 . + . ID=gene-AB25_RS13055;Name=yejF;gbkey=Gene;gene=yejF;gene_biotype=protein_coding;locus_tag=AB25_RS13055;old_locus_tag=AB25_2519 NZ_JJMC01000041.1 Protein Homology CDS 198880 200469 . + 0 ID=cds-WP_032170959.1;Parent=gene-AB25_RS13055;Dbxref=GenBank:WP_032170959.1;Name=WP_032170959.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=yejF;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416685.1;locus_tag=AB25_RS13055;product=microcin C ABC transporter ATP-binding protein YejF;protein_id=WP_032170959.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 200473 200817 . - . ID=gene-AB25_RS13050;Name=yejG;gbkey=Gene;gene=yejG;gene_biotype=protein_coding;locus_tag=AB25_RS13050;old_locus_tag=AB25_2520 NZ_JJMC01000041.1 Protein Homology CDS 200473 200817 . - 0 ID=cds-WP_000202791.1;Parent=gene-AB25_RS13050;Dbxref=GenBank:WP_000202791.1;Name=WP_000202791.1;gbkey=CDS;gene=yejG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416686.1;locus_tag=AB25_RS13050;product=YejG family protein;protein_id=WP_000202791.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 201150 202340 . - . ID=gene-AB25_RS13045;Name=bcr;gbkey=Gene;gene=bcr;gene_biotype=protein_coding;locus_tag=AB25_RS13045;old_locus_tag=AB25_2521 NZ_JJMC01000041.1 Protein Homology CDS 201150 202340 . - 0 ID=cds-WP_000213385.1;Parent=gene-AB25_RS13045;Dbxref=GenBank:WP_000213385.1;Name=WP_000213385.1;gbkey=CDS;gene=bcr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311101.1;locus_tag=AB25_RS13045;product=multidrug efflux MFS transporter Bcr;protein_id=WP_000213385.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 202368 203063 . - . ID=gene-AB25_RS13040;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=AB25_RS13040;old_locus_tag=AB25_2522 NZ_JJMC01000041.1 Protein Homology CDS 202368 203063 . - 0 ID=cds-WP_001234850.1;Parent=gene-AB25_RS13040;Dbxref=GenBank:WP_001234850.1;Name=WP_001234850.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311102.1;locus_tag=AB25_RS13040;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=WP_001234850.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 203213 204973 . + . ID=gene-AB25_RS13035;Name=radD;gbkey=Gene;gene=radD;gene_biotype=protein_coding;locus_tag=AB25_RS13035;old_locus_tag=AB25_2523 NZ_JJMC01000041.1 Protein Homology CDS 203213 204973 . + 0 ID=cds-WP_000578079.1;Parent=gene-AB25_RS13035;Dbxref=GenBank:WP_000578079.1;Name=WP_000578079.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;gene=radD;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708083.1;locus_tag=AB25_RS13035;product=DEAD/DEAH box helicase;protein_id=WP_000578079.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 205098 205382 . + . ID=gene-AB25_RS13030;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=AB25_RS13030;old_locus_tag=AB25_2524 NZ_JJMC01000041.1 Protein Homology CDS 205098 205382 . + 0 ID=cds-WP_000494183.1;Parent=gene-AB25_RS13030;Dbxref=GenBank:WP_000494183.1;Name=WP_000494183.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494192.1;locus_tag=AB25_RS13030;product=50S ribosomal protein L25;protein_id=WP_000494183.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 205521 206528 . - . ID=gene-AB25_RS13025;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=AB25_RS13025;old_locus_tag=AB25_2526 NZ_JJMC01000041.1 Protein Homology CDS 205521 206528 . - 0 ID=cds-WP_000050795.1;Parent=gene-AB25_RS13025;Dbxref=GenBank:WP_000050795.1;Name=WP_000050795.1;Ontology_term=GO:0009295;gbkey=CDS;gene=yejK;go_component=nucleoid|0009295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311105.1;locus_tag=AB25_RS13025;product=nucleoid-associated protein YejK;protein_id=WP_000050795.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 206710 206937 . + . ID=gene-AB25_RS13020;Name=yejL;gbkey=Gene;gene=yejL;gene_biotype=protein_coding;locus_tag=AB25_RS13020;old_locus_tag=AB25_2528 NZ_JJMC01000041.1 Protein Homology CDS 206710 206937 . + 0 ID=cds-WP_001135667.1;Parent=gene-AB25_RS13020;Dbxref=GenBank:WP_001135667.1;Name=WP_001135667.1;gbkey=CDS;gene=yejL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311106.1;locus_tag=AB25_RS13020;product=YejL family protein;protein_id=WP_001135667.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 206957 208717 . + . ID=gene-AB25_RS13015;Name=yejM;gbkey=Gene;gene=yejM;gene_biotype=protein_coding;locus_tag=AB25_RS13015;old_locus_tag=AB25_2529 NZ_JJMC01000041.1 Protein Homology CDS 206957 208717 . + 0 ID=cds-WP_000256203.1;Parent=gene-AB25_RS13015;Dbxref=GenBank:WP_000256203.1;Name=WP_000256203.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yejM;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311107.1;locus_tag=AB25_RS13015;product=LPS biosynthesis-modulating metalloenzyme YejM;protein_id=WP_000256203.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 208792 208868 . + . ID=gene-AB25_RS13010;Name=AB25_RS13010;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS13010;old_locus_tag=AB25_2530 NZ_JJMC01000041.1 tRNAscan-SE tRNA 208792 208868 . + . ID=rna-AB25_RS13010;Parent=gene-AB25_RS13010;anticodon=(pos:208826..208828);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS13010;product=tRNA-Pro NZ_JJMC01000041.1 tRNAscan-SE exon 208792 208868 . + . ID=exon-AB25_RS13010-1;Parent=rna-AB25_RS13010;anticodon=(pos:208826..208828);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS13010;product=tRNA-Pro NZ_JJMC01000041.1 RefSeq gene 208970 211339 . - . ID=gene-AB25_RS13005;Name=AB25_RS13005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS13005;old_locus_tag=AB25_2531 NZ_JJMC01000041.1 Protein Homology CDS 208970 211339 . - 0 ID=cds-WP_000554212.1;Parent=gene-AB25_RS13005;Dbxref=GenBank:WP_000554212.1;Name=WP_000554212.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311108.2;locus_tag=AB25_RS13005;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_000554212.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 211659 212306 . + . ID=gene-AB25_RS13000;Name=narP;gbkey=Gene;gene=narP;gene_biotype=protein_coding;locus_tag=AB25_RS13000;old_locus_tag=AB25_2532 NZ_JJMC01000041.1 Protein Homology CDS 211659 212306 . + 0 ID=cds-WP_001113637.1;Parent=gene-AB25_RS13000;Dbxref=GenBank:WP_001113637.1;Name=WP_001113637.1;gbkey=CDS;gene=narP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311109.1;locus_tag=AB25_RS13000;product=nitrate/nitrite response regulator protein NarP;protein_id=WP_001113637.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 212341 213393 . - . ID=gene-AB25_RS12995;Name=ccmH;gbkey=Gene;gene=ccmH;gene_biotype=protein_coding;locus_tag=AB25_RS12995;old_locus_tag=AB25_2533 NZ_JJMC01000041.1 Protein Homology CDS 212341 213393 . - 0 ID=cds-WP_001211575.1;Parent=gene-AB25_RS12995;Dbxref=GenBank:WP_001211575.1;Name=WP_001211575.1;gbkey=CDS;gene=ccmH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416698.1;locus_tag=AB25_RS12995;product=cytochrome c-type biogenesis thiol:disulfide oxidoreductase CcmH;protein_id=WP_001211575.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 213390 213947 . - . ID=gene-AB25_RS12990;Name=dsbE;gbkey=Gene;gene=dsbE;gene_biotype=protein_coding;locus_tag=AB25_RS12990;old_locus_tag=AB25_2534 NZ_JJMC01000041.1 Protein Homology CDS 213390 213947 . - 0 ID=cds-WP_000824439.1;Parent=gene-AB25_RS12990;Dbxref=GenBank:WP_000824439.1;Name=WP_000824439.1;gbkey=CDS;gene=dsbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311111.1;locus_tag=AB25_RS12990;product=thiol:disulfide interchange protein DsbE;protein_id=WP_000824439.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 213944 215887 . - . ID=gene-AB25_RS12985;Name=ccmF;gbkey=Gene;gene=ccmF;gene_biotype=protein_coding;locus_tag=AB25_RS12985;old_locus_tag=AB25_2535 NZ_JJMC01000041.1 Protein Homology CDS 213944 215887 . - 0 ID=cds-WP_000982453.1;Parent=gene-AB25_RS12985;Dbxref=GenBank:WP_000982453.1;Name=WP_000982453.1;gbkey=CDS;gene=ccmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311112.1;locus_tag=AB25_RS12985;product=cytochrome c-type biogenesis heme lyase CcmF;protein_id=WP_000982453.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 215884 216363 . - . ID=gene-AB25_RS12980;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=AB25_RS12980;old_locus_tag=AB25_2536 NZ_JJMC01000041.1 Protein Homology CDS 215884 216363 . - 0 ID=cds-WP_001026418.1;Parent=gene-AB25_RS12980;Dbxref=GenBank:WP_001026418.1;Name=WP_001026418.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311113.1;locus_tag=AB25_RS12980;product=cytochrome c maturation protein CcmE;protein_id=WP_001026418.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 216360 216569 . - . ID=gene-AB25_RS12975;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=AB25_RS12975;old_locus_tag=AB25_2537 NZ_JJMC01000041.1 Protein Homology CDS 216360 216569 . - 0 ID=cds-WP_000186540.1;Parent=gene-AB25_RS12975;Dbxref=GenBank:WP_000186540.1;Name=WP_000186540.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311114.1;locus_tag=AB25_RS12975;product=heme exporter protein CcmD;protein_id=WP_000186540.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 216566 217303 . - . ID=gene-AB25_RS12970;Name=ccmC;gbkey=Gene;gene=ccmC;gene_biotype=protein_coding;locus_tag=AB25_RS12970;old_locus_tag=AB25_2538 NZ_JJMC01000041.1 Protein Homology CDS 216566 217303 . - 0 ID=cds-WP_001295447.1;Parent=gene-AB25_RS12970;Dbxref=GenBank:WP_001295447.1;Name=WP_001295447.1;gbkey=CDS;gene=ccmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311115.1;locus_tag=AB25_RS12970;product=heme exporter protein CcmC;protein_id=WP_001295447.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 217345 218007 . - . ID=gene-AB25_RS12965;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=AB25_RS12965;old_locus_tag=AB25_2539 NZ_JJMC01000041.1 Protein Homology CDS 217345 218007 . - 0 ID=cds-WP_000971730.1;Parent=gene-AB25_RS12965;Dbxref=GenBank:WP_000971730.1;Name=WP_000971730.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311116.1;locus_tag=AB25_RS12965;product=heme exporter protein CcmB;protein_id=WP_000971730.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 218004 218627 . - . ID=gene-AB25_RS12960;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=AB25_RS12960;old_locus_tag=AB25_2540 NZ_JJMC01000041.1 Protein Homology CDS 218004 218627 . - 0 ID=cds-WP_000525587.1;Parent=gene-AB25_RS12960;Dbxref=GenBank:WP_000525587.1;Name=WP_000525587.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416705.2;locus_tag=AB25_RS12960;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=WP_000525587.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 218640 219242 . - . ID=gene-AB25_RS12955;Name=napC;gbkey=Gene;gene=napC;gene_biotype=protein_coding;locus_tag=AB25_RS12955;old_locus_tag=AB25_2541 NZ_JJMC01000041.1 Protein Homology CDS 218640 219242 . - 0 ID=cds-WP_000528376.1;Parent=gene-AB25_RS12955;Dbxref=GenBank:WP_000528376.1;Name=WP_000528376.1;gbkey=CDS;gene=napC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311118.1;locus_tag=AB25_RS12955;product=cytochrome c-type protein NapC;protein_id=WP_000528376.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 219252 219701 . - . ID=gene-AB25_RS12950;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=AB25_RS12950;old_locus_tag=AB25_2542 NZ_JJMC01000041.1 Protein Homology CDS 219252 219701 . - 0 ID=cds-WP_000835177.1;Parent=gene-AB25_RS12950;Dbxref=GenBank:WP_000835177.1;Name=WP_000835177.1;gbkey=CDS;gene=napB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311119.2;locus_tag=AB25_RS12950;product=nitrate reductase cytochrome c-type subunit;protein_id=WP_000835177.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 219698 220561 . - . ID=gene-AB25_RS12945;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=AB25_RS12945;old_locus_tag=AB25_2543 NZ_JJMC01000041.1 Protein Homology CDS 219698 220561 . - 0 ID=cds-WP_000013515.1;Parent=gene-AB25_RS12945;Dbxref=GenBank:WP_000013515.1;Name=WP_000013515.1;gbkey=CDS;gene=napH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416708.1;locus_tag=AB25_RS12945;product=quinol dehydrogenase ferredoxin subunit NapH;protein_id=WP_000013515.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 220548 221243 . - . ID=gene-AB25_RS12940;Name=napG;gbkey=Gene;gene=napG;gene_biotype=protein_coding;locus_tag=AB25_RS12940;old_locus_tag=AB25_2544 NZ_JJMC01000041.1 Protein Homology CDS 220548 221243 . - 0 ID=cds-WP_000091291.1;Parent=gene-AB25_RS12940;Dbxref=GenBank:WP_000091291.1;Name=WP_000091291.1;gbkey=CDS;gene=napG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416709.1;locus_tag=AB25_RS12940;product=ferredoxin-type protein NapG;protein_id=WP_000091291.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 221250 223736 . - . ID=gene-AB25_RS12935;Name=napA;gbkey=Gene;gene=napA;gene_biotype=protein_coding;locus_tag=AB25_RS12935;old_locus_tag=AB25_2545 NZ_JJMC01000041.1 Protein Homology CDS 221250 223736 . - 0 ID=cds-WP_000778067.1;Parent=gene-AB25_RS12935;Dbxref=GenBank:WP_000778067.1;Name=WP_000778067.1;Ontology_term=GO:0042126,GO:0008940,GO:0030151,GO:0009325;gbkey=CDS;gene=napA;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA,molybdenum ion binding|0030151||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311122.1;locus_tag=AB25_RS12935;product=periplasmic nitrate reductase subunit alpha;protein_id=WP_000778067.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 223733 223996 . - . ID=gene-AB25_RS12930;Name=napD;gbkey=Gene;gene=napD;gene_biotype=protein_coding;locus_tag=AB25_RS12930;old_locus_tag=AB25_2546 NZ_JJMC01000041.1 Protein Homology CDS 223733 223996 . - 0 ID=cds-WP_000557378.1;Parent=gene-AB25_RS12930;Dbxref=GenBank:WP_000557378.1;Name=WP_000557378.1;gbkey=CDS;gene=napD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311123.1;locus_tag=AB25_RS12930;product=chaperone NapD;protein_id=WP_000557378.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 223986 224480 . - . ID=gene-AB25_RS12925;Name=napF;gbkey=Gene;gene=napF;gene_biotype=protein_coding;locus_tag=AB25_RS12925;old_locus_tag=AB25_2547 NZ_JJMC01000041.1 Protein Homology CDS 223986 224480 . - 0 ID=cds-WP_000686723.1;Parent=gene-AB25_RS12925;Dbxref=GenBank:WP_000686723.1;Name=WP_000686723.1;Ontology_term=GO:0051539;gbkey=CDS;gene=napF;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311124.1;locus_tag=AB25_RS12925;product=ferredoxin-type protein NapF;protein_id=WP_000686723.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 224589 224753 . + . ID=gene-AB25_RS32015;Name=AB25_RS32015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32015;old_locus_tag=AB25_2548 NZ_JJMC01000041.1 Protein Homology CDS 224589 224753 . + 0 ID=cds-WP_032170960.1;Parent=gene-AB25_RS32015;Dbxref=GenBank:WP_032170960.1;Name=WP_032170960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518801.1;locus_tag=AB25_RS32015;product=hypothetical protein;protein_id=WP_032170960.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 224867 225376 . + . ID=gene-AB25_RS12915;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=AB25_RS12915;old_locus_tag=AB25_2549 NZ_JJMC01000041.1 Protein Homology CDS 224867 225376 . + 0 ID=cds-WP_282915988.1;Parent=gene-AB25_RS12915;Dbxref=GenBank:WP_282915988.1;Name=WP_282915988.1;Ontology_term=GO:0004867;gbkey=CDS;gene=eco;go_function=serine-type endopeptidase inhibitor activity|0004867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785302.1;locus_tag=AB25_RS12915;product=serine protease inhibitor ecotin;protein_id=WP_282915988.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 225867 227513 . - . ID=gene-AB25_RS12910;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;locus_tag=AB25_RS12910;old_locus_tag=AB25_2550 NZ_JJMC01000041.1 Protein Homology CDS 225867 227513 . - 0 ID=cds-WP_000758073.1;Parent=gene-AB25_RS12910;Dbxref=GenBank:WP_000758073.1;Name=WP_000758073.1;Ontology_term=GO:0006099,GO:0008924;gbkey=CDS;gene=mqo;go_function=L-malate dehydrogenase (quinone) activity|0008924||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311126.1;locus_tag=AB25_RS12910;product=malate dehydrogenase (quinone);protein_id=WP_000758073.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 227731 229374 . - . ID=gene-AB25_RS12905;Name=yojI;gbkey=Gene;gene=yojI;gene_biotype=protein_coding;locus_tag=AB25_RS12905;old_locus_tag=AB25_2551 NZ_JJMC01000041.1 Protein Homology CDS 227731 229374 . - 0 ID=cds-WP_000422188.1;Parent=gene-AB25_RS12905;Dbxref=GenBank:WP_000422188.1;Name=WP_000422188.1;gbkey=CDS;gene=yojI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416715.1;locus_tag=AB25_RS12905;product=microcin J25 efflux ABC transporter YojI;protein_id=WP_000422188.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 229450 230100 . - . ID=gene-AB25_RS12900;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=protein_coding;locus_tag=AB25_RS12900;old_locus_tag=AB25_2552 NZ_JJMC01000041.1 Protein Homology CDS 229450 230100 . - 0 ID=cds-WP_000884919.1;Parent=gene-AB25_RS12900;Dbxref=GenBank:WP_000884919.1;Name=WP_000884919.1;gbkey=CDS;gene=alkB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311128.1;locus_tag=AB25_RS12900;product=DNA oxidative demethylase AlkB;protein_id=WP_000884919.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 230100 231164 . - . ID=gene-AB25_RS12895;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=AB25_RS12895;old_locus_tag=AB25_2553 NZ_JJMC01000041.1 Protein Homology CDS 230100 231164 . - 0 ID=cds-WP_000710374.1;Parent=gene-AB25_RS12895;Dbxref=GenBank:WP_000710374.1;Name=WP_000710374.1;Ontology_term=GO:0006281,GO:0006355,GO:0003700;gbkey=CDS;gene=ada;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA repair|0006281||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416717.1;locus_tag=AB25_RS12895;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=WP_000710374.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 231238 232293 . - . ID=gene-AB25_RS12890;Name=apbE;gbkey=Gene;gene=apbE;gene_biotype=protein_coding;locus_tag=AB25_RS12890;old_locus_tag=AB25_2554 NZ_JJMC01000041.1 Protein Homology CDS 231238 232293 . - 0 ID=cds-WP_000406055.1;Parent=gene-AB25_RS12890;Dbxref=GenBank:WP_000406055.1;Name=WP_000406055.1;Ontology_term=GO:0017013;gbkey=CDS;gene=apbE;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311130.1;locus_tag=AB25_RS12890;product=FAD:protein FMN transferase ApbE;protein_id=WP_000406055.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 232405 233508 . - . ID=gene-AB25_RS12885;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=AB25_RS12885;old_locus_tag=AB25_2555 NZ_JJMC01000041.1 Protein Homology CDS 232405 233508 . - 0 ID=cds-WP_000865577.1;Parent=gene-AB25_RS12885;Dbxref=GenBank:WP_000865577.1;Name=WP_000865577.1;gbkey=CDS;gene=ompC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311131.1;locus_tag=AB25_RS12885;product=porin OmpC;protein_id=WP_000865577.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 234247 236919 . + . ID=gene-AB25_RS12875;Name=rcsD;gbkey=Gene;gene=rcsD;gene_biotype=protein_coding;locus_tag=AB25_RS12875;old_locus_tag=AB25_2557 NZ_JJMC01000041.1 Protein Homology CDS 234247 236919 . + 0 ID=cds-WP_001249146.1;Parent=gene-AB25_RS12875;Dbxref=GenBank:WP_001249146.1;Name=WP_001249146.1;Ontology_term=GO:0000160,GO:0009927,GO:0005886;gbkey=CDS;gene=rcsD;go_component=plasma membrane|0005886||IEA;go_function=histidine phosphotransfer kinase activity|0009927||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311132.1;locus_tag=AB25_RS12875;product=phosphotransferase RcsD;protein_id=WP_001249146.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 236936 237586 . + . ID=gene-AB25_RS12870;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=AB25_RS12870;old_locus_tag=AB25_2558 NZ_JJMC01000041.1 Protein Homology CDS 236936 237586 . + 0 ID=cds-WP_001061917.1;Parent=gene-AB25_RS12870;Dbxref=GenBank:WP_001061917.1;Name=WP_001061917.1;gbkey=CDS;gene=rcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311133.1;locus_tag=AB25_RS12870;product=response regulator transcription factor RcsB;protein_id=WP_001061917.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 237786 240635 . - . ID=gene-AB25_RS12865;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=protein_coding;locus_tag=AB25_RS12865;old_locus_tag=AB25_2559 NZ_JJMC01000041.1 Protein Homology CDS 237786 240635 . - 0 ID=cds-WP_000876014.1;Parent=gene-AB25_RS12865;Dbxref=GenBank:WP_000876014.1;Name=WP_000876014.1;Ontology_term=GO:0000160,GO:0006355,GO:0018106,GO:0000155,GO:0005524,GO:0016020;gbkey=CDS;gene=rcsC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,peptidyl-histidine phosphorylation|0018106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416722.2;locus_tag=AB25_RS12865;product=two-component system sensor histidine kinase RcsC;protein_id=WP_000876014.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 240802 242628 . + . ID=gene-AB25_RS12860;Name=atoS;gbkey=Gene;gene=atoS;gene_biotype=protein_coding;locus_tag=AB25_RS12860;old_locus_tag=AB25_2560 NZ_JJMC01000041.1 Protein Homology CDS 240802 242628 . + 0 ID=cds-WP_000559125.1;Parent=gene-AB25_RS12860;Dbxref=GenBank:WP_000559125.1;Name=WP_000559125.1;gbkey=CDS;gene=atoS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416723.1;locus_tag=AB25_RS12860;product=two-component system sensor histidine kinase AtoS;protein_id=WP_000559125.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 242625 244010 . + . ID=gene-AB25_RS12855;Name=atoC;gbkey=Gene;gene=atoC;gene_biotype=protein_coding;locus_tag=AB25_RS12855;old_locus_tag=AB25_2561 NZ_JJMC01000041.1 Protein Homology CDS 242625 244010 . + 0 ID=cds-WP_000125282.1;Parent=gene-AB25_RS12855;Dbxref=GenBank:WP_000125282.1;Name=WP_000125282.1;gbkey=CDS;gene=atoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416724.1;locus_tag=AB25_RS12855;product=acetoacetate metabolism transcriptional regulator AtoC;protein_id=WP_000125282.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 244206 244868 . + . ID=gene-AB25_RS12850;Name=atoD;gbkey=Gene;gene=atoD;gene_biotype=protein_coding;locus_tag=AB25_RS12850;old_locus_tag=AB25_2562 NZ_JJMC01000041.1 Protein Homology CDS 244206 244868 . + 0 ID=cds-WP_000850540.1;Parent=gene-AB25_RS12850;Dbxref=GenBank:WP_000850540.1;Name=WP_000850540.1;gbkey=CDS;gene=atoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416725.1;locus_tag=AB25_RS12850;product=acetate CoA-transferase subunit alpha;protein_id=WP_000850540.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 244868 245518 . + . ID=gene-AB25_RS12845;Name=atoA;gbkey=Gene;gene=atoA;gene_biotype=protein_coding;locus_tag=AB25_RS12845;old_locus_tag=AB25_2563 NZ_JJMC01000041.1 Protein Homology CDS 244868 245518 . + 0 ID=cds-WP_000339065.1;Parent=gene-AB25_RS12845;Dbxref=GenBank:WP_000339065.1;Name=WP_000339065.1;gbkey=CDS;gene=atoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416726.1;locus_tag=AB25_RS12845;product=acetate CoA-transferase subunit beta;protein_id=WP_000339065.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 245515 246837 . + . ID=gene-AB25_RS12840;Name=atoE;gbkey=Gene;gene=atoE;gene_biotype=protein_coding;locus_tag=AB25_RS12840;old_locus_tag=AB25_2564 NZ_JJMC01000041.1 Protein Homology CDS 245515 246837 . + 0 ID=cds-WP_000580284.1;Parent=gene-AB25_RS12840;Dbxref=GenBank:WP_000580284.1;Name=WP_000580284.1;gbkey=CDS;gene=atoE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416727.1;locus_tag=AB25_RS12840;product=TIGR00366 family protein;protein_id=WP_000580284.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 246868 248052 . + . ID=gene-AB25_RS12835;Name=atoB;gbkey=Gene;gene=atoB;gene_biotype=protein_coding;locus_tag=AB25_RS12835;old_locus_tag=AB25_2565 NZ_JJMC01000041.1 Protein Homology CDS 246868 248052 . + 0 ID=cds-WP_000786527.1;Parent=gene-AB25_RS12835;Dbxref=GenBank:WP_000786527.1;Name=WP_000786527.1;gbkey=CDS;gene=atoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416728.1;locus_tag=AB25_RS12835;product=acetyl-CoA acetyltransferase;protein_id=WP_000786527.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 248126 248902 . - . ID=gene-AB25_RS12830;Name=yfaP;gbkey=Gene;gene=yfaP;gene_biotype=protein_coding;locus_tag=AB25_RS12830;old_locus_tag=AB25_2566 NZ_JJMC01000041.1 Protein Homology CDS 248126 248902 . - 0 ID=cds-WP_001225855.1;Parent=gene-AB25_RS12830;Dbxref=GenBank:WP_001225855.1;Name=WP_001225855.1;gbkey=CDS;gene=yfaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311135.1;locus_tag=AB25_RS12830;product=YfaP family protein;protein_id=WP_001225855.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 248907 250556 . - . ID=gene-AB25_RS12825;Name=yfaQ;gbkey=Gene;gene=yfaQ;gene_biotype=protein_coding;locus_tag=AB25_RS12825;old_locus_tag=AB25_2567 NZ_JJMC01000041.1 Protein Homology CDS 248907 250556 . - 0 ID=cds-WP_032170982.1;Parent=gene-AB25_RS12825;Dbxref=GenBank:WP_032170982.1;Name=WP_032170982.1;gbkey=CDS;gene=yfaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416730.1;locus_tag=AB25_RS12825;product=YfaQ family protein;protein_id=WP_032170982.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 250557 255071 . - . ID=gene-AB25_RS12820;Name=AB25_RS12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS12820;old_locus_tag=AB25_2568 NZ_JJMC01000041.1 Protein Homology CDS 250557 255071 . - 0 ID=cds-WP_032170984.1;Parent=gene-AB25_RS12820;Dbxref=GenBank:WP_032170984.1;Name=WP_032170984.1;Ontology_term=GO:0010951,GO:0004866;gbkey=CDS;go_function=endopeptidase inhibitor activity|0004866||IEA;go_process=negative regulation of endopeptidase activity|0010951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000536590.1;locus_tag=AB25_RS12820;product=alpha-2-macroglobulin family protein;protein_id=WP_032170984.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 255095 255718 . - . ID=gene-AB25_RS12815;Name=yfaT;gbkey=Gene;gene=yfaT;gene_biotype=protein_coding;locus_tag=AB25_RS12815;old_locus_tag=AB25_2569 NZ_JJMC01000041.1 Protein Homology CDS 255095 255718 . - 0 ID=cds-WP_001323797.1;Parent=gene-AB25_RS12815;Dbxref=GenBank:WP_001323797.1;Name=WP_001323797.1;gbkey=CDS;gene=yfaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311139.2;locus_tag=AB25_RS12815;product=DUF1175 domain-containing protein;protein_id=WP_001323797.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 255715 257343 . - . ID=gene-AB25_RS12810;Name=yfaA;gbkey=Gene;gene=yfaA;gene_biotype=protein_coding;locus_tag=AB25_RS12810;old_locus_tag=AB25_2570 NZ_JJMC01000041.1 Protein Homology CDS 255715 257343 . - 0 ID=cds-WP_050439163.1;Parent=gene-AB25_RS12810;Dbxref=GenBank:WP_050439163.1;Name=WP_050439163.1;gbkey=CDS;gene=yfaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000239352.1;locus_tag=AB25_RS12810;product=DUF2138 domain-containing protein;protein_id=WP_050439163.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 257551 260178 . - . ID=gene-AB25_RS12805;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=AB25_RS12805;old_locus_tag=AB25_2571 NZ_JJMC01000041.1 Protein Homology CDS 257551 260178 . - 0 ID=cds-WP_001281242.1;Parent=gene-AB25_RS12805;Dbxref=GenBank:WP_001281242.1;Name=WP_001281242.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416734.1;locus_tag=AB25_RS12805;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WP_001281242.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 260325 261047 . + . ID=gene-AB25_RS12800;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=AB25_RS12800;old_locus_tag=AB25_2572 NZ_JJMC01000041.1 Protein Homology CDS 260325 261047 . + 0 ID=cds-WP_000990753.1;Parent=gene-AB25_RS12800;Dbxref=GenBank:WP_000990753.1;Name=WP_000990753.1;Ontology_term=GO:0006744,GO:0061542;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinol 3-O-methyltransferase activity|0061542||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416735.1;locus_tag=AB25_RS12800;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_000990753.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 261175 264927 . - . ID=gene-AB25_RS12795;Name=yfaL;gbkey=Gene;gene=yfaL;gene_biotype=protein_coding;locus_tag=AB25_RS12795;old_locus_tag=AB25_2573 NZ_JJMC01000041.1 Protein Homology CDS 261175 264927 . - 0 ID=cds-WP_001220077.1;Parent=gene-AB25_RS12795;Dbxref=GenBank:WP_001220077.1;Name=WP_001220077.1;Ontology_term=GO:0019867;gbkey=CDS;gene=yfaL;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416736.1;locus_tag=AB25_RS12795;product=AIDA-I family autotransporter adhesin YfaL/EhaC;protein_id=WP_001220077.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 265352 265495 . - . ID=gene-AB25_RS32710;Name=ypaB;gbkey=Gene;gene=ypaB;gene_biotype=protein_coding;locus_tag=AB25_RS32710 NZ_JJMC01000041.1 Protein Homology CDS 265352 265495 . - 0 ID=cds-WP_001753443.1;Parent=gene-AB25_RS32710;Dbxref=GenBank:WP_001753443.1;Name=WP_001753443.1;gbkey=CDS;gene=ypaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001753443.1;locus_tag=AB25_RS32710;product=protein YpaB;protein_id=WP_001753443.1;transl_table=11 NZ_JJMC01000041.1 RefSeq gene 265623 267908 . + . ID=gene-AB25_RS12790;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=AB25_RS12790;old_locus_tag=AB25_2574 NZ_JJMC01000041.1 Protein Homology CDS 265623 267908 . + 0 ID=cds-WP_001075172.1;Parent=gene-AB25_RS12790;Dbxref=GenBank:WP_001075172.1;Name=WP_001075172.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=AB25_RS12790;product=class 1a ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_001075172.1;transl_table=11 ##sequence-region NZ_JJMC01000042.1 1 6121 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000042.1 RefSeq region 1 6121 . + . ID=NZ_JJMC01000042.1:1..6121;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000042.1 RefSeq gene 1 692 . - . ID=gene-AB25_RS12785;Name=AB25_RS12785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS12785;old_locus_tag=AB25_2575;partial=true;start_range=.,1 NZ_JJMC01000042.1 Protein Homology CDS 443 692 . - 0 ID=cds-WP_236293883.1;Parent=gene-AB25_RS12785;Dbxref=GenBank:WP_236293883.1;Name=WP_236293883.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB25_RS12785;partial=true;product=IS1-like element IS1A family transposase;protein_id=WP_236293883.1;transl_table=11 NZ_JJMC01000042.1 Protein Homology CDS 1 443 . - 2 ID=cds-WP_236293883.1;Parent=gene-AB25_RS12785;Dbxref=GenBank:WP_236293883.1;Name=WP_236293883.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB25_RS12785;partial=true;product=IS1-like element IS1A family transposase;protein_id=WP_236293883.1;start_range=.,1;transl_table=11 NZ_JJMC01000042.1 RefSeq pseudogene 749 1060 . + . ID=gene-AB25_RS12780;Name=AB25_RS12780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS12780;old_locus_tag=AB25_2576;partial=true;pseudo=true;start_range=.,749 NZ_JJMC01000042.1 Protein Homology CDS 749 1060 . + 0 ID=cds-AB25_RS12780;Parent=gene-AB25_RS12780;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904571.1;locus_tag=AB25_RS12780;partial=true;product=IS66 family transposase;pseudo=true;start_range=.,749;transl_table=11 NZ_JJMC01000042.1 RefSeq gene 1197 1891 . - . ID=gene-AB25_RS30415;Name=AB25_RS30415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS30415 NZ_JJMC01000042.1 Protein Homology CDS 1645 1891 . - 0 ID=cds-WP_085949854.1;Parent=gene-AB25_RS30415;Dbxref=GenBank:WP_085949854.1;Name=WP_085949854.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477181.1;locus_tag=AB25_RS30415;product=IS1 family transposase;protein_id=WP_085949854.1;transl_table=11 NZ_JJMC01000042.1 Protein Homology CDS 1197 1645 . - 2 ID=cds-WP_085949854.1;Parent=gene-AB25_RS30415;Dbxref=GenBank:WP_085949854.1;Name=WP_085949854.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477181.1;locus_tag=AB25_RS30415;product=IS1 family transposase;protein_id=WP_085949854.1;transl_table=11 NZ_JJMC01000042.1 RefSeq gene 2712 3170 . - . ID=gene-AB25_RS0125625;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AB25_RS0125625 NZ_JJMC01000042.1 Protein Homology CDS 2712 3170 . - 0 ID=cds-WP_032170757.1;Parent=gene-AB25_RS0125625;Dbxref=GenBank:WP_032170757.1;Name=WP_032170757.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=AB25_RS0125625;product=IS200/IS605 family transposase;protein_id=WP_032170757.1;transl_table=11 NZ_JJMC01000042.1 RefSeq pseudogene 3674 3787 . - . ID=gene-AB25_RS32980;Name=AB25_RS32980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32980;partial=true;pseudo=true;start_range=.,3674 NZ_JJMC01000042.1 Protein Homology CDS 3674 3787 . - 0 ID=cds-AB25_RS32980;Parent=gene-AB25_RS32980;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000466957.1;locus_tag=AB25_RS32980;partial=true;product=DUF3927 domain-containing protein;pseudo=true;start_range=.,3674;transl_table=11 NZ_JJMC01000042.1 RefSeq gene 4289 5311 . + . ID=gene-AB25_RS12765;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=AB25_RS12765;old_locus_tag=AB25_2583 NZ_JJMC01000042.1 Protein Homology CDS 4289 5311 . + 0 ID=cds-WP_032215751.1-3;Parent=gene-AB25_RS12765;Dbxref=GenBank:WP_032215751.1;Name=WP_032215751.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=AB25_RS12765;product=IS21-like element IS100 family transposase;protein_id=WP_032215751.1;transl_table=11 NZ_JJMC01000042.1 RefSeq gene 5308 6090 . + . ID=gene-AB25_RS12760;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=AB25_RS12760;old_locus_tag=AB25_2584 NZ_JJMC01000042.1 Protein Homology CDS 5308 6090 . + 0 ID=cds-WP_077754671.1-2;Parent=gene-AB25_RS12760;Dbxref=GenBank:WP_077754671.1;Name=WP_077754671.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=AB25_RS12760;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_077754671.1;transl_table=11 ##sequence-region NZ_JJMC01000043.1 1 117345 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000043.1 RefSeq region 1 117345 . + . ID=NZ_JJMC01000043.1:1..117345;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000043.1 RefSeq gene 123 1253 . + . ID=gene-AB25_RS12755;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=AB25_RS12755;old_locus_tag=AB25_2585 NZ_JJMC01000043.1 Protein Homology CDS 123 1253 . + 0 ID=cds-WP_000332036.1;Parent=gene-AB25_RS12755;Dbxref=GenBank:WP_000332036.1;Name=WP_000332036.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683700.1;locus_tag=AB25_RS12755;product=class Ia ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000332036.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 1253 1507 . + . ID=gene-AB25_RS12750;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=AB25_RS12750;old_locus_tag=AB25_2586 NZ_JJMC01000043.1 Protein Homology CDS 1253 1507 . + 0 ID=cds-WP_000135040.1;Parent=gene-AB25_RS12750;Dbxref=GenBank:WP_000135040.1;Name=WP_000135040.1;gbkey=CDS;gene=yfaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416739.1;locus_tag=AB25_RS12750;product=ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE;protein_id=WP_000135040.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 1561 2211 . - . ID=gene-AB25_RS12745;Name=inaA;gbkey=Gene;gene=inaA;gene_biotype=protein_coding;locus_tag=AB25_RS12745;old_locus_tag=AB25_2587 NZ_JJMC01000043.1 Protein Homology CDS 1561 2211 . - 0 ID=cds-WP_000301049.1;Parent=gene-AB25_RS12745;Dbxref=GenBank:WP_000301049.1;Name=WP_000301049.1;gbkey=CDS;gene=inaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416740.1;locus_tag=AB25_RS12745;product=lipopolysaccharide kinase InaA;protein_id=WP_000301049.1;transl_table=11 NZ_JJMC01000043.1 RefSeq pseudogene 2291 2395 . - . ID=gene-AB25_RS32475;Name=AB25_RS32475;end_range=2395,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32475;partial=true;pseudo=true NZ_JJMC01000043.1 Protein Homology CDS 2291 2395 . - 0 ID=cds-AB25_RS32475;Parent=gene-AB25_RS32475;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2395,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311148.1;locus_tag=AB25_RS32475;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJMC01000043.1 RefSeq pseudogene 2390 2632 . + . ID=gene-AB25_RS12740;Name=AB25_RS12740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS12740;old_locus_tag=AB25_2588;partial=true;pseudo=true;start_range=.,2390 NZ_JJMC01000043.1 Protein Homology CDS 2390 2632 . + 0 ID=cds-AB25_RS12740;Parent=gene-AB25_RS12740;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311149.1;locus_tag=AB25_RS12740;partial=true;product=LysR family transcriptional regulator;pseudo=true;start_range=.,2390;transl_table=11 NZ_JJMC01000043.1 RefSeq pseudogene 3098 4168 . + . ID=gene-AB25_RS12735;Name=AB25_RS12735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS12735;old_locus_tag=AB25_2589;pseudo=true NZ_JJMC01000043.1 Protein Homology CDS 3098 4168 . + 0 ID=cds-AB25_RS12735;Parent=gene-AB25_RS12735;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311150.1;locus_tag=AB25_RS12735;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 4387 5463 . - . ID=gene-AB25_RS12730;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=AB25_RS12730;old_locus_tag=AB25_2590 NZ_JJMC01000043.1 Protein Homology CDS 4387 5463 . - 0 ID=cds-WP_000779091.1;Parent=gene-AB25_RS12730;Dbxref=GenBank:WP_000779091.1;Name=WP_000779091.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=glpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311151.1;locus_tag=AB25_RS12730;product=glycerophosphodiester phosphodiesterase;protein_id=WP_000779091.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 5468 6826 . - . ID=gene-AB25_RS12725;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=AB25_RS12725;old_locus_tag=AB25_2591 NZ_JJMC01000043.1 Protein Homology CDS 5468 6826 . - 0 ID=cds-WP_000948732.1;Parent=gene-AB25_RS12725;Dbxref=GenBank:WP_000948732.1;Name=WP_000948732.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416743.1;locus_tag=AB25_RS12725;product=glycerol-3-phosphate transporter;protein_id=WP_000948732.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 7099 8727 . + . ID=gene-AB25_RS12720;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=AB25_RS12720;old_locus_tag=AB25_2593 NZ_JJMC01000043.1 Protein Homology CDS 7099 8727 . + 0 ID=cds-WP_000857257.1;Parent=gene-AB25_RS12720;Dbxref=GenBank:WP_000857257.1;Name=WP_000857257.1;Ontology_term=GO:0006072,GO:0046174,GO:0004368,GO:0010181,GO:0050660,GO:0009331;gbkey=CDS;gene=glpA;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA,polyol catabolic process|0046174||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311153.1;locus_tag=AB25_RS12720;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_000857257.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 8717 9976 . + . ID=gene-AB25_RS12715;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=AB25_RS12715;old_locus_tag=AB25_2594 NZ_JJMC01000043.1 Protein Homology CDS 8717 9976 . + 0 ID=cds-WP_001209922.1;Parent=gene-AB25_RS12715;Dbxref=GenBank:WP_001209922.1;Name=WP_001209922.1;Ontology_term=GO:0004368;gbkey=CDS;gene=glpB;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416745.1;locus_tag=AB25_RS12715;product=glycerol-3-phosphate dehydrogenase subunit GlpB;protein_id=WP_001209922.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 9973 11163 . + . ID=gene-AB25_RS12710;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=AB25_RS12710;old_locus_tag=AB25_2595 NZ_JJMC01000043.1 Protein Homology CDS 9973 11163 . + 0 ID=cds-WP_001000358.1;Parent=gene-AB25_RS12710;Dbxref=GenBank:WP_001000358.1;Name=WP_001000358.1;Ontology_term=GO:0006071,GO:0009061,GO:0004368,GO:0051536,GO:0009331,GO:0016020;gbkey=CDS;gene=glpC;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA,membrane|0016020||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=glycerol metabolic process|0006071||IEA,anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311155.1;locus_tag=AB25_RS12710;product=anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC;protein_id=WP_001000358.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 11357 12259 . + . ID=gene-AB25_RS12705;Name=rpnE;gbkey=Gene;gene=rpnE;gene_biotype=protein_coding;locus_tag=AB25_RS12705;old_locus_tag=AB25_2596 NZ_JJMC01000043.1 Protein Homology CDS 11357 12259 . + 0 ID=cds-WP_000140570.1;Parent=gene-AB25_RS12705;Dbxref=GenBank:WP_000140570.1;Name=WP_000140570.1;gbkey=CDS;gene=rpnE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311156.1;locus_tag=AB25_RS12705;product=ISNCY family transposase;protein_id=WP_000140570.1;transl_table=11 NZ_JJMC01000043.1 RefSeq pseudogene 12300 12761 . - . ID=gene-AB25_RS12700;Name=AB25_RS12700;end_range=12761,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS12700;old_locus_tag=AB25_2597;partial=true;pseudo=true NZ_JJMC01000043.1 Protein Homology CDS 12300 12761 . - 0 ID=cds-AB25_RS12700;Parent=gene-AB25_RS12700;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0003824;end_range=12761,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416748.1;locus_tag=AB25_RS12700;partial=true;product=aldolase/citrate lyase family protein;pseudo=true;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 12825 14027 . - . ID=gene-AB25_RS12695;Name=yfaY;gbkey=Gene;gene=yfaY;gene_biotype=protein_coding;locus_tag=AB25_RS12695;old_locus_tag=AB25_2598 NZ_JJMC01000043.1 Protein Homology CDS 12825 14027 . - 0 ID=cds-WP_000921619.1;Parent=gene-AB25_RS12695;Dbxref=GenBank:WP_000921619.1;Name=WP_000921619.1;gbkey=CDS;gene=yfaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416752.1;locus_tag=AB25_RS12695;product=nicotinamide mononucleotide deamidase-related protein YfaY;protein_id=WP_000921619.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 14127 14669 . - . ID=gene-AB25_RS12690;Name=yfaZ;gbkey=Gene;gene=yfaZ;gene_biotype=protein_coding;locus_tag=AB25_RS12690;old_locus_tag=AB25_2599 NZ_JJMC01000043.1 Protein Homology CDS 14127 14669 . - 0 ID=cds-WP_000717009.1;Parent=gene-AB25_RS12690;Dbxref=GenBank:WP_000717009.1;Name=WP_000717009.1;gbkey=CDS;gene=yfaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311165.2;locus_tag=AB25_RS12690;product=YfaZ family outer membrane protein;protein_id=WP_000717009.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 14948 15373 . + . ID=gene-AB25_RS12685;Name=nudI;gbkey=Gene;gene=nudI;gene_biotype=protein_coding;locus_tag=AB25_RS12685;old_locus_tag=AB25_2600 NZ_JJMC01000043.1 Protein Homology CDS 14948 15373 . + 0 ID=cds-WP_001249889.1;Parent=gene-AB25_RS12685;Dbxref=GenBank:WP_001249889.1;Name=WP_001249889.1;Ontology_term=GO:0016818;gbkey=CDS;gene=nudI;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311166.1;locus_tag=AB25_RS12685;product=nucleoside triphosphatase NudI;protein_id=WP_001249889.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 15412 16014 . - . ID=gene-AB25_RS12680;Name=ais;gbkey=Gene;gene=ais;gene_biotype=protein_coding;locus_tag=AB25_RS12680;old_locus_tag=AB25_2601 NZ_JJMC01000043.1 Protein Homology CDS 15412 16014 . - 0 ID=cds-WP_001297077.1;Parent=gene-AB25_RS12680;Dbxref=GenBank:WP_001297077.1;Name=WP_001297077.1;gbkey=CDS;gene=ais;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311167.1;locus_tag=AB25_RS12680;product=lipopolysaccharide core heptose(II)-phosphate phosphatase Ais;protein_id=WP_001297077.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 16322 17461 . + . ID=gene-AB25_RS12675;Name=arnB;gbkey=Gene;gene=arnB;gene_biotype=protein_coding;locus_tag=AB25_RS12675;old_locus_tag=AB25_2602 NZ_JJMC01000043.1 Protein Homology CDS 16322 17461 . + 0 ID=cds-WP_001288720.1;Parent=gene-AB25_RS12675;Dbxref=GenBank:WP_001288720.1;Name=WP_001288720.1;Ontology_term=GO:0008483;gbkey=CDS;gene=arnB;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_024188371.1;locus_tag=AB25_RS12675;product=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;protein_id=WP_001288720.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 17465 18433 . + . ID=gene-AB25_RS12670;Name=arnC;gbkey=Gene;gene=arnC;gene_biotype=protein_coding;locus_tag=AB25_RS12670;old_locus_tag=AB25_2603 NZ_JJMC01000043.1 Protein Homology CDS 17465 18433 . + 0 ID=cds-WP_032173500.1;Parent=gene-AB25_RS12670;Dbxref=GenBank:WP_032173500.1;Name=WP_032173500.1;Ontology_term=GO:0016780;gbkey=CDS;gene=arnC;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416757.1;locus_tag=AB25_RS12670;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WP_032173500.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 18433 20415 . + . ID=gene-AB25_RS12665;Name=arnA;gbkey=Gene;gene=arnA;gene_biotype=protein_coding;locus_tag=AB25_RS12665;old_locus_tag=AB25_2604 NZ_JJMC01000043.1 Protein Homology CDS 18433 20415 . + 0 ID=cds-WP_001363173.1;Parent=gene-AB25_RS12665;Dbxref=GenBank:WP_001363173.1;Name=WP_001363173.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;gene=arnA;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311170.1;locus_tag=AB25_RS12665;product=bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA;protein_id=WP_001363173.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 20412 21302 . + . ID=gene-AB25_RS12660;Name=arnD;gbkey=Gene;gene=arnD;gene_biotype=protein_coding;locus_tag=AB25_RS12660;old_locus_tag=AB25_2605 NZ_JJMC01000043.1 Protein Homology CDS 20412 21302 . + 0 ID=cds-WP_000169728.1;Parent=gene-AB25_RS12660;Dbxref=GenBank:WP_000169728.1;Name=WP_000169728.1;Ontology_term=GO:0016810;gbkey=CDS;gene=arnD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416759.1;locus_tag=AB25_RS12660;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;protein_id=WP_000169728.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 21302 22954 . + . ID=gene-AB25_RS12655;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=AB25_RS12655;old_locus_tag=AB25_2606 NZ_JJMC01000043.1 Protein Homology CDS 21302 22954 . + 0 ID=cds-WP_000844055.1;Parent=gene-AB25_RS12655;Dbxref=GenBank:WP_000844055.1;Name=WP_000844055.1;Ontology_term=GO:0006493,GO:0000030,GO:0016763,GO:0016020;gbkey=CDS;gene=arnT;go_component=membrane|0016020||IEA;go_function=mannosyltransferase activity|0000030||IEA,pentosyltransferase activity|0016763||IEA;go_process=protein O-linked glycosylation|0006493||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416760.1;locus_tag=AB25_RS12655;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;protein_id=WP_000844055.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 22951 23286 . + . ID=gene-AB25_RS12650;Name=arnE;gbkey=Gene;gene=arnE;gene_biotype=protein_coding;locus_tag=AB25_RS12650;old_locus_tag=AB25_2607 NZ_JJMC01000043.1 Protein Homology CDS 22951 23286 . + 0 ID=cds-WP_000638031.1;Parent=gene-AB25_RS12650;Dbxref=GenBank:WP_000638031.1;Name=WP_000638031.1;gbkey=CDS;gene=arnE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588462.1;locus_tag=AB25_RS12650;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WP_000638031.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 23286 23672 . + . ID=gene-AB25_RS12645;Name=arnF;gbkey=Gene;gene=arnF;gene_biotype=protein_coding;locus_tag=AB25_RS12645;old_locus_tag=AB25_2608 NZ_JJMC01000043.1 Protein Homology CDS 23286 23672 . + 0 ID=cds-WP_001392412.1;Parent=gene-AB25_RS12645;Dbxref=GenBank:WP_001392412.1;Name=WP_001392412.1;gbkey=CDS;gene=arnF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416761.4;locus_tag=AB25_RS12645;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=WP_001392412.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 23666 23932 . - . ID=gene-AB25_RS12640;Name=pmrD;gbkey=Gene;gene=pmrD;gene_biotype=protein_coding;locus_tag=AB25_RS12640;old_locus_tag=AB25_2609 NZ_JJMC01000043.1 Protein Homology CDS 23666 23932 . - 0 ID=cds-WP_001295285.1;Parent=gene-AB25_RS12640;Dbxref=GenBank:WP_001295285.1;Name=WP_001295285.1;gbkey=CDS;gene=pmrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416762.2;locus_tag=AB25_RS12640;product=signal transduction protein PmrD;protein_id=WP_001295285.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 24042 25397 . - . ID=gene-AB25_RS12635;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=AB25_RS12635;old_locus_tag=AB25_2610 NZ_JJMC01000043.1 Protein Homology CDS 24042 25397 . - 0 ID=cds-WP_000577607.1;Parent=gene-AB25_RS12635;Dbxref=GenBank:WP_000577607.1;Name=WP_000577607.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416763.1;locus_tag=AB25_RS12635;product=o-succinylbenzoate--CoA ligase;protein_id=WP_000577607.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 25394 26356 . - . ID=gene-AB25_RS12630;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=AB25_RS12630;old_locus_tag=AB25_2611 NZ_JJMC01000043.1 Protein Homology CDS 25394 26356 . - 0 ID=cds-WP_001255632.1;Parent=gene-AB25_RS12630;Dbxref=GenBank:WP_001255632.1;Name=WP_001255632.1;Ontology_term=GO:0009234,GO:0000287,GO:0016836;gbkey=CDS;gene=menC;go_function=magnesium ion binding|0000287||IEA,hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311176.1;locus_tag=AB25_RS12630;product=o-succinylbenzoate synthase;protein_id=WP_001255632.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 26356 27213 . - . ID=gene-AB25_RS12625;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=AB25_RS12625;old_locus_tag=AB25_2612 NZ_JJMC01000043.1 Protein Homology CDS 26356 27213 . - 0 ID=cds-WP_000639996.1;Parent=gene-AB25_RS12625;Dbxref=GenBank:WP_000639996.1;Name=WP_000639996.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641973.1;locus_tag=AB25_RS12625;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_000639996.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 27228 27986 . - . ID=gene-AB25_RS12620;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=AB25_RS12620;old_locus_tag=AB25_2613 NZ_JJMC01000043.1 Protein Homology CDS 27228 27986 . - 0 ID=cds-WP_000600503.1;Parent=gene-AB25_RS12620;Dbxref=GenBank:WP_000600503.1;Name=WP_000600503.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416766.1;locus_tag=AB25_RS12620;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_000600503.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 27983 29653 . - . ID=gene-AB25_RS12615;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=AB25_RS12615;old_locus_tag=AB25_2614 NZ_JJMC01000043.1 Protein Homology CDS 27983 29653 . - 0 ID=cds-WP_001295284.1;Parent=gene-AB25_RS12615;Dbxref=GenBank:WP_001295284.1;Name=WP_001295284.1;Ontology_term=GO:0009234,GO:0030976,GO:0070204;gbkey=CDS;gene=menD;go_function=thiamine pyrophosphate binding|0030976||IEA,2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416767.1;locus_tag=AB25_RS12615;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_001295284.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 29742 31037 . - . ID=gene-AB25_RS12610;Name=menF;gbkey=Gene;gene=menF;gene_biotype=protein_coding;locus_tag=AB25_RS12610;old_locus_tag=AB25_2615 NZ_JJMC01000043.1 Protein Homology CDS 29742 31037 . - 0 ID=cds-WP_001191399.1;Parent=gene-AB25_RS12610;Dbxref=GenBank:WP_001191399.1;Name=WP_001191399.1;Ontology_term=GO:0008909;gbkey=CDS;gene=menF;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416768.4;locus_tag=AB25_RS12610;product=isochorismate synthase MenF;protein_id=WP_001191399.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 31116 31421 . - . ID=gene-AB25_RS12605;Name=elaB;gbkey=Gene;gene=elaB;gene_biotype=protein_coding;locus_tag=AB25_RS12605;old_locus_tag=AB25_2616 NZ_JJMC01000043.1 Protein Homology CDS 31116 31421 . - 0 ID=cds-WP_000070626.1;Parent=gene-AB25_RS12605;Dbxref=GenBank:WP_000070626.1;Name=WP_000070626.1;gbkey=CDS;gene=elaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311181.1;locus_tag=AB25_RS12605;product=stress response protein ElaB;protein_id=WP_000070626.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 31476 31937 . - . ID=gene-AB25_RS12600;Name=elaA;gbkey=Gene;gene=elaA;gene_biotype=protein_coding;locus_tag=AB25_RS12600;old_locus_tag=AB25_2617 NZ_JJMC01000043.1 Protein Homology CDS 31476 31937 . - 0 ID=cds-WP_000574091.1;Parent=gene-AB25_RS12600;Dbxref=GenBank:WP_000574091.1;Name=WP_000574091.1;gbkey=CDS;gene=elaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416770.1;locus_tag=AB25_RS12600;product=GNAT family N-acetyltransferase;protein_id=WP_000574091.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 32002 32919 . + . ID=gene-AB25_RS12595;Name=rbn;gbkey=Gene;gene=rbn;gene_biotype=protein_coding;locus_tag=AB25_RS12595;old_locus_tag=AB25_2618 NZ_JJMC01000043.1 Protein Homology CDS 32002 32919 . + 0 ID=cds-WP_001300687.1;Parent=gene-AB25_RS12595;Dbxref=GenBank:WP_001300687.1;Name=WP_001300687.1;Ontology_term=GO:0042780,GO:0016891;gbkey=CDS;gene=rbn;go_function=RNA endonuclease activity%2C producing 5'-phosphomonoesters|0016891||IEA;go_process=tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416771.4;locus_tag=AB25_RS12595;product=ribonuclease BN;protein_id=WP_001300687.1;transl_table=11 NZ_JJMC01000043.1 RefSeq pseudogene 33107 34326 . + . ID=gene-AB25_RS0125645;Name=elaD;gbkey=Gene;gene=elaD;gene_biotype=pseudogene;locus_tag=AB25_RS0125645;pseudo=true NZ_JJMC01000043.1 Protein Homology CDS 33107 34326 . + 0 ID=cds-AB25_RS0125645;Parent=gene-AB25_RS0125645;Note=frameshifted;gbkey=CDS;gene=elaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416772.1;locus_tag=AB25_RS0125645;product=deubiquitinase ElaD;pseudo=true;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 34397 36151 . - . ID=gene-AB25_RS12590;Name=yfbK;gbkey=Gene;gene=yfbK;gene_biotype=protein_coding;locus_tag=AB25_RS12590;old_locus_tag=AB25_2622 NZ_JJMC01000043.1 Protein Homology CDS 34397 36151 . - 0 ID=cds-WP_001374299.1;Parent=gene-AB25_RS12590;Dbxref=GenBank:WP_001374299.1;Name=WP_001374299.1;gbkey=CDS;gene=yfbK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416773.1;locus_tag=AB25_RS12590;product=vWA domain-containing protein;protein_id=WP_001374299.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 36289 37260 . + . ID=gene-AB25_RS12585;Name=yfbL;gbkey=Gene;gene=yfbL;gene_biotype=protein_coding;locus_tag=AB25_RS12585;old_locus_tag=AB25_2623 NZ_JJMC01000043.1 Protein Homology CDS 36289 37260 . + 0 ID=cds-WP_032173501.1;Parent=gene-AB25_RS12585;Dbxref=GenBank:WP_032173501.1;Name=WP_032173501.1;gbkey=CDS;gene=yfbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416774.2;locus_tag=AB25_RS12585;product=M28 family metallopeptidase;protein_id=WP_032173501.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 37363 37866 . + . ID=gene-AB25_RS12580;Name=yfbM;gbkey=Gene;gene=yfbM;gene_biotype=protein_coding;locus_tag=AB25_RS12580;old_locus_tag=AB25_2624 NZ_JJMC01000043.1 Protein Homology CDS 37363 37866 . + 0 ID=cds-WP_000525365.1;Parent=gene-AB25_RS12580;Dbxref=GenBank:WP_000525365.1;Name=WP_000525365.1;gbkey=CDS;gene=yfbM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311186.1;locus_tag=AB25_RS12580;product=YfbM family protein;protein_id=WP_000525365.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 37933 39390 . - . ID=gene-AB25_RS12575;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=AB25_RS12575;old_locus_tag=AB25_2625 NZ_JJMC01000043.1 Protein Homology CDS 37933 39390 . - 0 ID=cds-WP_000156716.1;Parent=gene-AB25_RS12575;Dbxref=GenBank:WP_000156716.1;Name=WP_000156716.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416779.2;locus_tag=AB25_RS12575;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_000156716.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 39397 40926 . - . ID=gene-AB25_RS12570;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=AB25_RS12570;old_locus_tag=AB25_2626 NZ_JJMC01000043.1 Protein Homology CDS 39397 40926 . - 0 ID=cds-WP_000926441.1;Parent=gene-AB25_RS12570;Dbxref=GenBank:WP_000926441.1;Name=WP_000926441.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=AB25_RS12570;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_000926441.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 41090 42931 . - . ID=gene-AB25_RS12565;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=AB25_RS12565;old_locus_tag=AB25_2627 NZ_JJMC01000043.1 Protein Homology CDS 41090 42931 . - 0 ID=cds-WP_001056635.1;Parent=gene-AB25_RS12565;Dbxref=GenBank:WP_001056635.1;Name=WP_001056635.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129466.1;locus_tag=AB25_RS12565;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_001056635.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 42928 43230 . - . ID=gene-AB25_RS12560;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=AB25_RS12560;old_locus_tag=AB25_2628 NZ_JJMC01000043.1 Protein Homology CDS 42928 43230 . - 0 ID=cds-WP_000612644.1;Parent=gene-AB25_RS12560;Dbxref=GenBank:WP_000612644.1;Name=WP_000612644.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1;locus_tag=AB25_RS12560;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_000612644.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 43227 43781 . - . ID=gene-AB25_RS12555;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=AB25_RS12555;old_locus_tag=AB25_2629 NZ_JJMC01000043.1 Protein Homology CDS 43227 43781 . - 0 ID=cds-WP_000393511.1;Parent=gene-AB25_RS12555;Dbxref=GenBank:WP_000393511.1;Name=WP_000393511.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774950.1;locus_tag=AB25_RS12555;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_000393511.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 43793 44335 . - . ID=gene-AB25_RS12550;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=AB25_RS12550;old_locus_tag=AB25_2630 NZ_JJMC01000043.1 Protein Homology CDS 43793 44335 . - 0 ID=cds-WP_000172749.1;Parent=gene-AB25_RS12550;Dbxref=GenBank:WP_000172749.1;Name=WP_000172749.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoI;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1;locus_tag=AB25_RS12550;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_000172749.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 44350 45327 . - . ID=gene-AB25_RS12545;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=AB25_RS12545;old_locus_tag=AB25_2631 NZ_JJMC01000043.1 Protein Homology CDS 44350 45327 . - 0 ID=cds-WP_000118507.1;Parent=gene-AB25_RS12545;Dbxref=GenBank:WP_000118507.1;Name=WP_000118507.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=AB25_RS12545;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_000118507.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 45324 48050 . - . ID=gene-AB25_RS12540;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=AB25_RS12540;old_locus_tag=AB25_2632 NZ_JJMC01000043.1 Protein Homology CDS 45324 48050 . - 0 ID=cds-WP_001356271.1;Parent=gene-AB25_RS12540;Dbxref=GenBank:WP_001356271.1;Name=WP_001356271.1;Ontology_term=GO:0006120,GO:0050136,GO:0051536;gbkey=CDS;gene=nuoG;go_function=NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311194.2;locus_tag=AB25_RS12540;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_001356271.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 48103 49440 . - . ID=gene-AB25_RS12535;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=AB25_RS12535;old_locus_tag=AB25_2633 NZ_JJMC01000043.1 Protein Homology CDS 48103 49440 . - 0 ID=cds-WP_000789502.1;Parent=gene-AB25_RS12535;Dbxref=GenBank:WP_000789502.1;Name=WP_000789502.1;Ontology_term=GO:0008137,GO:0051539;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311195.1;locus_tag=AB25_RS12535;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_000789502.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 49437 49937 . - . ID=gene-AB25_RS12530;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=AB25_RS12530;old_locus_tag=AB25_2634 NZ_JJMC01000043.1 Protein Homology CDS 49437 49937 . - 0 ID=cds-WP_000545042.1;Parent=gene-AB25_RS12530;Dbxref=GenBank:WP_000545042.1;Name=WP_000545042.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416788.1;locus_tag=AB25_RS12530;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_000545042.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 49940 51742 . - . ID=gene-AB25_RS12525;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=AB25_RS12525;old_locus_tag=AB25_2635 NZ_JJMC01000043.1 Protein Homology CDS 49940 51742 . - 0 ID=cds-WP_000247878.1;Parent=gene-AB25_RS12525;Dbxref=GenBank:WP_000247878.1;Name=WP_000247878.1;Ontology_term=GO:0048038,GO:0050136,GO:0051287,GO:0030964;gbkey=CDS;gene=nuoC;go_component=NADH dehydrogenase complex|0030964||IEA;go_function=quinone binding|0048038||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708168.1;locus_tag=AB25_RS12525;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WP_000247878.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 51836 52498 . - . ID=gene-AB25_RS12520;Name=nuoB;gbkey=Gene;gene=nuoB;gene_biotype=protein_coding;locus_tag=AB25_RS12520;old_locus_tag=AB25_2636 NZ_JJMC01000043.1 Protein Homology CDS 51836 52498 . - 0 ID=cds-WP_000386733.1;Parent=gene-AB25_RS12520;Dbxref=GenBank:WP_000386733.1;Name=WP_000386733.1;gbkey=CDS;gene=nuoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311198.1;locus_tag=AB25_RS12520;product=NADH-quinone oxidoreductase subunit NuoB;protein_id=WP_000386733.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 52514 52957 . - . ID=gene-AB25_RS12515;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=AB25_RS12515;old_locus_tag=AB25_2637 NZ_JJMC01000043.1 Protein Homology CDS 52514 52957 . - 0 ID=cds-WP_000062997.1;Parent=gene-AB25_RS12515;Dbxref=GenBank:WP_000062997.1;Name=WP_000062997.1;gbkey=CDS;gene=nuoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708170.1;locus_tag=AB25_RS12515;product=NADH-quinone oxidoreductase subunit NuoA;protein_id=WP_000062997.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 53589 54527 . - . ID=gene-AB25_RS12510;Name=lrhA;gbkey=Gene;gene=lrhA;gene_biotype=protein_coding;locus_tag=AB25_RS12510;old_locus_tag=AB25_2639 NZ_JJMC01000043.1 Protein Homology CDS 53589 54527 . - 0 ID=cds-WP_000622286.1;Parent=gene-AB25_RS12510;Dbxref=GenBank:WP_000622286.1;Name=WP_000622286.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lrhA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311200.1;locus_tag=AB25_RS12510;product=transcriptional regulator LrhA;protein_id=WP_000622286.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 55442 56659 . + . ID=gene-AB25_RS12505;Name=alaA;gbkey=Gene;gene=alaA;gene_biotype=protein_coding;locus_tag=AB25_RS12505;old_locus_tag=AB25_2640 NZ_JJMC01000043.1 Protein Homology CDS 55442 56659 . + 0 ID=cds-WP_000074527.1;Parent=gene-AB25_RS12505;Dbxref=GenBank:WP_000074527.1;Name=WP_000074527.1;gbkey=CDS;gene=alaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416793.1;locus_tag=AB25_RS12505;product=alanine transaminase AlaA;protein_id=WP_000074527.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 56743 57342 . + . ID=gene-AB25_RS12500;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;locus_tag=AB25_RS12500;old_locus_tag=AB25_2641 NZ_JJMC01000043.1 Protein Homology CDS 56743 57342 . + 0 ID=cds-WP_000813876.1;Parent=gene-AB25_RS12500;Dbxref=GenBank:WP_000813876.1;Name=WP_000813876.1;Ontology_term=GO:0002953;gbkey=CDS;gene=yfbR;go_function=5'-deoxynucleotidase activity|0002953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311202.1;locus_tag=AB25_RS12500;product=5'-deoxynucleotidase;protein_id=WP_000813876.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 57401 59233 . - . ID=gene-AB25_RS12495;Name=yfbS;gbkey=Gene;gene=yfbS;gene_biotype=protein_coding;locus_tag=AB25_RS12495;old_locus_tag=AB25_2642 NZ_JJMC01000043.1 Protein Homology CDS 57401 59233 . - 0 ID=cds-WP_001012899.1;Parent=gene-AB25_RS12495;Dbxref=GenBank:WP_001012899.1;Name=WP_001012899.1;Ontology_term=GO:0008324;gbkey=CDS;gene=yfbS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311203.1;locus_tag=AB25_RS12495;product=SLC13 family permease;protein_id=WP_001012899.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 59320 59970 . - . ID=gene-AB25_RS12490;Name=hxpA;gbkey=Gene;gene=hxpA;gene_biotype=protein_coding;locus_tag=AB25_RS12490;old_locus_tag=AB25_2643 NZ_JJMC01000043.1 Protein Homology CDS 59320 59970 . - 0 ID=cds-WP_032296023.1;Parent=gene-AB25_RS12490;Dbxref=GenBank:WP_032296023.1;Name=WP_032296023.1;gbkey=CDS;gene=hxpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311204.1;locus_tag=AB25_RS12490;product=hexitol phosphatase HxpA;protein_id=WP_032296023.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 59981 60475 . - . ID=gene-AB25_RS12485;Name=yfbU;gbkey=Gene;gene=yfbU;gene_biotype=protein_coding;locus_tag=AB25_RS12485;old_locus_tag=AB25_2644 NZ_JJMC01000043.1 Protein Homology CDS 59981 60475 . - 0 ID=cds-WP_000426124.1;Parent=gene-AB25_RS12485;Dbxref=GenBank:WP_000426124.1;Name=WP_000426124.1;gbkey=CDS;gene=yfbU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371080.1;locus_tag=AB25_RS12485;product=YfbU family protein;protein_id=WP_000426124.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 60558 61013 . - . ID=gene-AB25_RS12480;Name=yfbV;gbkey=Gene;gene=yfbV;gene_biotype=protein_coding;locus_tag=AB25_RS12480;old_locus_tag=AB25_2645 NZ_JJMC01000043.1 Protein Homology CDS 60558 61013 . - 0 ID=cds-WP_000106627.1;Parent=gene-AB25_RS12480;Dbxref=GenBank:WP_000106627.1;Name=WP_000106627.1;gbkey=CDS;gene=yfbV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129545.1;locus_tag=AB25_RS12480;product=terminus macrodomain insulation protein YfbV;protein_id=WP_000106627.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 61351 62553 . + . ID=gene-AB25_RS12470;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=AB25_RS12470;old_locus_tag=AB25_2647 NZ_JJMC01000043.1 Protein Homology CDS 61351 62553 . + 0 ID=cds-WP_000095707.1;Parent=gene-AB25_RS12470;Dbxref=GenBank:WP_000095707.1;Name=WP_000095707.1;gbkey=CDS;gene=ackA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1;locus_tag=AB25_RS12470;product=acetate kinase;protein_id=WP_000095707.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 62628 64772 . + . ID=gene-AB25_RS12465;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=AB25_RS12465;old_locus_tag=AB25_2648 NZ_JJMC01000043.1 Protein Homology CDS 62628 64772 . + 0 ID=cds-WP_000086722.1;Parent=gene-AB25_RS12465;Dbxref=GenBank:WP_000086722.1;Name=WP_000086722.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416800.1;locus_tag=AB25_RS12465;product=phosphate acetyltransferase;protein_id=WP_000086722.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 64962 66482 . + . ID=gene-AB25_RS12460;Name=yfcC;gbkey=Gene;gene=yfcC;gene_biotype=protein_coding;locus_tag=AB25_RS12460;old_locus_tag=AB25_2649 NZ_JJMC01000043.1 Protein Homology CDS 64962 66482 . + 0 ID=cds-WP_032171000.1;Parent=gene-AB25_RS12460;Dbxref=GenBank:WP_032171000.1;Name=WP_032171000.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yfcC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416801.2;locus_tag=AB25_RS12460;product=putative basic amino acid antiporter YfcC;protein_id=WP_032171000.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 66515 67057 . - . ID=gene-AB25_RS12455;Name=yfcD;gbkey=Gene;gene=yfcD;gene_biotype=protein_coding;locus_tag=AB25_RS12455;old_locus_tag=AB25_2650 NZ_JJMC01000043.1 Protein Homology CDS 66515 67057 . - 0 ID=cds-WP_000437935.1;Parent=gene-AB25_RS12455;Dbxref=GenBank:WP_000437935.1;Name=WP_000437935.1;Ontology_term=GO:0016817;gbkey=CDS;gene=yfcD;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311210.1;locus_tag=AB25_RS12455;product=NUDIX hydrolase YfcD;protein_id=WP_000437935.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 67115 67666 . - . ID=gene-AB25_RS12450;Name=yfcE;gbkey=Gene;gene=yfcE;gene_biotype=protein_coding;locus_tag=AB25_RS12450;old_locus_tag=AB25_2651 NZ_JJMC01000043.1 Protein Homology CDS 67115 67666 . - 0 ID=cds-WP_000772452.1;Parent=gene-AB25_RS12450;Dbxref=GenBank:WP_000772452.1;Name=WP_000772452.1;gbkey=CDS;gene=yfcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311211.4;locus_tag=AB25_RS12450;product=phosphodiesterase;protein_id=WP_000772452.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 67722 68366 . - . ID=gene-AB25_RS12445;Name=yfcF;gbkey=Gene;gene=yfcF;gene_biotype=protein_coding;locus_tag=AB25_RS12445;old_locus_tag=AB25_2652 NZ_JJMC01000043.1 Protein Homology CDS 67722 68366 . - 0 ID=cds-WP_000042444.1;Parent=gene-AB25_RS12445;Dbxref=GenBank:WP_000042444.1;Name=WP_000042444.1;Ontology_term=GO:0006749;gbkey=CDS;gene=yfcF;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708183.1;locus_tag=AB25_RS12445;product=glutathione transferase;protein_id=WP_000042444.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 68502 69149 . + . ID=gene-AB25_RS12440;Name=yfcG;gbkey=Gene;gene=yfcG;gene_biotype=protein_coding;locus_tag=AB25_RS12440;old_locus_tag=AB25_2653 NZ_JJMC01000043.1 Protein Homology CDS 68502 69149 . + 0 ID=cds-WP_032296027.1;Parent=gene-AB25_RS12440;Dbxref=GenBank:WP_032296027.1;Name=WP_032296027.1;gbkey=CDS;gene=yfcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416805.1;locus_tag=AB25_RS12440;product=GSH-dependent disulfide bond oxidoreductase;protein_id=WP_032296027.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 69206 69568 . + . ID=gene-AB25_RS12435;Name=folX;gbkey=Gene;gene=folX;gene_biotype=protein_coding;locus_tag=AB25_RS12435;old_locus_tag=AB25_2654 NZ_JJMC01000043.1 Protein Homology CDS 69206 69568 . + 0 ID=cds-WP_000068457.1;Parent=gene-AB25_RS12435;Dbxref=GenBank:WP_000068457.1;Name=WP_000068457.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folX;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311214.1;locus_tag=AB25_RS12435;product=dihydroneopterin triphosphate 2'-epimerase;protein_id=WP_000068457.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 69589 70482 . + . ID=gene-AB25_RS12430;Name=yfcH;gbkey=Gene;gene=yfcH;gene_biotype=protein_coding;locus_tag=AB25_RS12430;old_locus_tag=AB25_2655 NZ_JJMC01000043.1 Protein Homology CDS 69589 70482 . + 0 ID=cds-WP_001028327.1;Parent=gene-AB25_RS12430;Dbxref=GenBank:WP_001028327.1;Name=WP_001028327.1;Ontology_term=GO:0003824;gbkey=CDS;gene=yfcH;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416807.1;locus_tag=AB25_RS12430;product=TIGR01777 family oxidoreductase;protein_id=WP_001028327.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 70530 71420 . - . ID=gene-AB25_RS12425;Name=rpnB;gbkey=Gene;gene=rpnB;gene_biotype=protein_coding;locus_tag=AB25_RS12425;old_locus_tag=AB25_2656 NZ_JJMC01000043.1 Protein Homology CDS 70530 71420 . - 0 ID=cds-WP_000156114.1;Parent=gene-AB25_RS12425;Dbxref=GenBank:WP_000156114.1;Name=WP_000156114.1;gbkey=CDS;gene=rpnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416808.1;locus_tag=AB25_RS12425;product=recombination-promoting nuclease RpnB;protein_id=WP_000156114.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 71617 72390 . - . ID=gene-AB25_RS12420;Name=hisP;gbkey=Gene;gene=hisP;gene_biotype=protein_coding;locus_tag=AB25_RS12420;old_locus_tag=AB25_2657 NZ_JJMC01000043.1 Protein Homology CDS 71617 72390 . - 0 ID=cds-WP_001293623.1;Parent=gene-AB25_RS12420;Dbxref=GenBank:WP_001293623.1;Name=WP_001293623.1;gbkey=CDS;gene=hisP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311217.1;locus_tag=AB25_RS12420;product=histidine ABC transporter ATP-binding protein HisP;protein_id=WP_001293623.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 72398 73114 . - . ID=gene-AB25_RS12415;Name=hisM;gbkey=Gene;gene=hisM;gene_biotype=protein_coding;locus_tag=AB25_RS12415;old_locus_tag=AB25_2658 NZ_JJMC01000043.1 Protein Homology CDS 72398 73114 . - 0 ID=cds-WP_000569958.1;Parent=gene-AB25_RS12415;Dbxref=GenBank:WP_000569958.1;Name=WP_000569958.1;Ontology_term=GO:0022857,GO:0055052;gbkey=CDS;gene=hisM;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311218.1;locus_tag=AB25_RS12415;product=ABC transporter permease;protein_id=WP_000569958.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 73111 73797 . - . ID=gene-AB25_RS12410;Name=hisQ;gbkey=Gene;gene=hisQ;gene_biotype=protein_coding;locus_tag=AB25_RS12410;old_locus_tag=AB25_2659 NZ_JJMC01000043.1 Protein Homology CDS 73111 73797 . - 0 ID=cds-WP_000965518.1;Parent=gene-AB25_RS12410;Dbxref=GenBank:WP_000965518.1;Name=WP_000965518.1;gbkey=CDS;gene=hisQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124147.1;locus_tag=AB25_RS12410;product=histidine ABC transporter permease HisQ;protein_id=WP_000965518.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 73887 74669 . - . ID=gene-AB25_RS12405;Name=hisJ;gbkey=Gene;gene=hisJ;gene_biotype=protein_coding;locus_tag=AB25_RS12405;old_locus_tag=AB25_2660 NZ_JJMC01000043.1 Protein Homology CDS 73887 74669 . - 0 ID=cds-WP_000737621.1;Parent=gene-AB25_RS12405;Dbxref=GenBank:WP_000737621.1;Name=WP_000737621.1;gbkey=CDS;gene=hisJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311220.1;locus_tag=AB25_RS12405;product=histidine ABC transporter substrate-binding protein HisJ;protein_id=WP_000737621.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 74890 75672 . - . ID=gene-AB25_RS12400;Name=argT;gbkey=Gene;gene=argT;gene_biotype=protein_coding;locus_tag=AB25_RS12400;old_locus_tag=AB25_2661 NZ_JJMC01000043.1 Protein Homology CDS 74890 75672 . - 0 ID=cds-WP_000748261.1;Parent=gene-AB25_RS12400;Dbxref=GenBank:WP_000748261.1;Name=WP_000748261.1;gbkey=CDS;gene=argT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311221.1;locus_tag=AB25_RS12400;product=lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT;protein_id=WP_000748261.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 75938 76507 . - . ID=gene-AB25_RS12395;Name=ubiX;gbkey=Gene;gene=ubiX;gene_biotype=protein_coding;locus_tag=AB25_RS12395;old_locus_tag=AB25_2662 NZ_JJMC01000043.1 Protein Homology CDS 75938 76507 . - 0 ID=cds-WP_000825700.1;Parent=gene-AB25_RS12395;Dbxref=GenBank:WP_000825700.1;Name=WP_000825700.1;gbkey=CDS;gene=ubiX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120208.1;locus_tag=AB25_RS12395;product=flavin prenyltransferase UbiX;protein_id=WP_000825700.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 76602 78119 . - . ID=gene-AB25_RS12390;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=AB25_RS12390;old_locus_tag=AB25_2663 NZ_JJMC01000043.1 Protein Homology CDS 76602 78119 . - 0 ID=cds-WP_000334220.1;Parent=gene-AB25_RS12390;Dbxref=GenBank:WP_000334220.1;Name=WP_000334220.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=AB25_RS12390;product=amidophosphoribosyltransferase;protein_id=WP_000334220.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 78156 78644 . - . ID=gene-AB25_RS12385;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=AB25_RS12385;old_locus_tag=AB25_2664 NZ_JJMC01000043.1 Protein Homology CDS 78156 78644 . - 0 ID=cds-WP_000262113.1;Parent=gene-AB25_RS12385;Dbxref=GenBank:WP_000262113.1;Name=WP_000262113.1;gbkey=CDS;gene=cvpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311224.1;locus_tag=AB25_RS12385;product=colicin V production protein;protein_id=WP_000262113.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 78903 79565 . - . ID=gene-AB25_RS12380;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=protein_coding;locus_tag=AB25_RS12380;old_locus_tag=AB25_2665 NZ_JJMC01000043.1 Protein Homology CDS 78903 79565 . - 0 ID=cds-WP_000146992.1;Parent=gene-AB25_RS12380;Dbxref=GenBank:WP_000146992.1;Name=WP_000146992.1;Ontology_term=GO:0032506,GO:0042834,GO:0030428;gbkey=CDS;gene=dedD;go_component=cell septum|0030428||IEA;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416817.2;locus_tag=AB25_RS12380;product=cell division protein DedD;protein_id=WP_000146992.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 79555 80823 . - . ID=gene-AB25_RS12375;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=AB25_RS12375;old_locus_tag=AB25_2666 NZ_JJMC01000043.1 Protein Homology CDS 79555 80823 . - 0 ID=cds-WP_032171003.1;Parent=gene-AB25_RS12375;Dbxref=GenBank:WP_032171003.1;Name=WP_032171003.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416818.1;locus_tag=AB25_RS12375;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_032171003.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 80893 81807 . - . ID=gene-AB25_RS12370;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=AB25_RS12370;old_locus_tag=AB25_2667 NZ_JJMC01000043.1 Protein Homology CDS 80893 81807 . - 0 ID=cds-WP_000118404.1;Parent=gene-AB25_RS12370;Dbxref=GenBank:WP_000118404.1;Name=WP_000118404.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311227.1;locus_tag=AB25_RS12370;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_000118404.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 81963 82622 . - . ID=gene-AB25_RS12365;Name=dedA;gbkey=Gene;gene=dedA;gene_biotype=protein_coding;locus_tag=AB25_RS12365;old_locus_tag=AB25_2668 NZ_JJMC01000043.1 Protein Homology CDS 81963 82622 . - 0 ID=cds-WP_000364331.1;Parent=gene-AB25_RS12365;Dbxref=GenBank:WP_000364331.1;Name=WP_000364331.1;gbkey=CDS;gene=dedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311228.1;locus_tag=AB25_RS12365;product=DedA family protein;protein_id=WP_000364331.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 82705 83517 . - . ID=gene-AB25_RS12360;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=AB25_RS12360;old_locus_tag=AB25_2669 NZ_JJMC01000043.1 Protein Homology CDS 82705 83517 . - 0 ID=cds-WP_001283590.1;Parent=gene-AB25_RS12360;Dbxref=GenBank:WP_001283590.1;Name=WP_001283590.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311229.1;locus_tag=AB25_RS12360;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_001283590.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 83517 84530 . - . ID=gene-AB25_RS12355;Name=usg;gbkey=Gene;gene=usg;gene_biotype=protein_coding;locus_tag=AB25_RS12355;old_locus_tag=AB25_2670 NZ_JJMC01000043.1 Protein Homology CDS 83517 84530 . - 0 ID=cds-WP_001289163.1;Parent=gene-AB25_RS12355;Dbxref=GenBank:WP_001289163.1;Name=WP_001289163.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983,GO:0051287;gbkey=CDS;gene=usg;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416822.1;locus_tag=AB25_RS12355;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_001289163.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 84596 85732 . - . ID=gene-AB25_RS12350;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=AB25_RS12350;old_locus_tag=AB25_2671 NZ_JJMC01000043.1 Protein Homology CDS 84596 85732 . - 0 ID=cds-WP_000699121.1;Parent=gene-AB25_RS12350;Dbxref=GenBank:WP_000699121.1;Name=WP_000699121.1;Ontology_term=GO:0008615,GO:0033711,GO:0046983,GO:0051287;gbkey=CDS;gene=pdxB;go_function=4-phosphoerythronate dehydrogenase activity|0033711||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708202.1;locus_tag=AB25_RS12350;product=4-phosphoerythronate dehydrogenase PdxB;protein_id=WP_000699121.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 85831 86826 . + . ID=gene-AB25_RS12345;Name=flk;gbkey=Gene;gene=flk;gene_biotype=protein_coding;locus_tag=AB25_RS12345;old_locus_tag=AB25_2672 NZ_JJMC01000043.1 Protein Homology CDS 85831 86826 . + 0 ID=cds-WP_000615813.1;Parent=gene-AB25_RS12345;Dbxref=GenBank:WP_000615813.1;Name=WP_000615813.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;gene=flk;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708203.1;locus_tag=AB25_RS12345;product=flagella biosynthesis regulator Flk;protein_id=WP_000615813.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 86823 88001 . - . ID=gene-AB25_RS12340;Name=yfcJ;gbkey=Gene;gene=yfcJ;gene_biotype=protein_coding;locus_tag=AB25_RS12340;old_locus_tag=AB25_2673 NZ_JJMC01000043.1 Protein Homology CDS 86823 88001 . - 0 ID=cds-WP_000127757.1;Parent=gene-AB25_RS12340;Dbxref=GenBank:WP_000127757.1;Name=WP_000127757.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=yfcJ;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416825.1;locus_tag=AB25_RS12340;product=arabinose transporter;protein_id=WP_000127757.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 88285 89505 . - . ID=gene-AB25_RS12335;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=AB25_RS12335;old_locus_tag=AB25_2674 NZ_JJMC01000043.1 Protein Homology CDS 88285 89505 . - 0 ID=cds-WP_000817183.1;Parent=gene-AB25_RS12335;Dbxref=GenBank:WP_000817183.1;Name=WP_000817183.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311234.1;locus_tag=AB25_RS12335;product=beta-ketoacyl-ACP synthase I;protein_id=WP_000817183.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 89664 91670 . + . ID=gene-AB25_RS12330;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=AB25_RS12330;old_locus_tag=AB25_2675 NZ_JJMC01000043.1 Protein Homology CDS 89664 91670 . + 0 ID=cds-WP_000683797.1;Parent=gene-AB25_RS12330;Dbxref=GenBank:WP_000683797.1;Name=WP_000683797.1;Ontology_term=GO:0008033,GO:0004808,GO:0016491;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,oxidoreductase activity|0016491||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416827.4;locus_tag=AB25_RS12330;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=WP_000683797.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 91791 92069 . - . ID=gene-AB25_RS12325;Name=yfcL;gbkey=Gene;gene=yfcL;gene_biotype=protein_coding;locus_tag=AB25_RS12325;old_locus_tag=AB25_2676 NZ_JJMC01000043.1 Protein Homology CDS 91791 92069 . - 0 ID=cds-WP_000559764.1;Parent=gene-AB25_RS12325;Dbxref=GenBank:WP_000559764.1;Name=WP_000559764.1;gbkey=CDS;gene=yfcL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311236.1;locus_tag=AB25_RS12325;product=YfcL family protein;protein_id=WP_000559764.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 92103 92651 . - . ID=gene-AB25_RS12320;Name=epmC;gbkey=Gene;gene=epmC;gene_biotype=protein_coding;locus_tag=AB25_RS12320;old_locus_tag=AB25_2677 NZ_JJMC01000043.1 Protein Homology CDS 92103 92651 . - 0 ID=cds-WP_001374345.1;Parent=gene-AB25_RS12320;Dbxref=GenBank:WP_001374345.1;Name=WP_001374345.1;gbkey=CDS;gene=epmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416829.1;locus_tag=AB25_RS12320;product=elongation factor P hydroxylase;protein_id=WP_001374345.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 92651 93460 . - . ID=gene-AB25_RS12315;Name=yfcA;gbkey=Gene;gene=yfcA;gene_biotype=protein_coding;locus_tag=AB25_RS12315;old_locus_tag=AB25_2678 NZ_JJMC01000043.1 Protein Homology CDS 92651 93460 . - 0 ID=cds-WP_000447361.1;Parent=gene-AB25_RS12315;Dbxref=GenBank:WP_000447361.1;Name=WP_000447361.1;gbkey=CDS;gene=yfcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311238.1;locus_tag=AB25_RS12315;product=sulfite exporter TauE/SafE family protein;protein_id=WP_000447361.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 93460 94284 . - . ID=gene-AB25_RS12310;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=AB25_RS12310;old_locus_tag=AB25_2679 NZ_JJMC01000043.1 Protein Homology CDS 93460 94284 . - 0 ID=cds-WP_001043819.1;Parent=gene-AB25_RS12310;Dbxref=GenBank:WP_001043819.1;Name=WP_001043819.1;Ontology_term=GO:0006508,GO:0004252,GO:0030288;gbkey=CDS;gene=mepA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416831.1;locus_tag=AB25_RS12310;product=penicillin-insensitive murein endopeptidase;protein_id=WP_001043819.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 94288 95373 . - . ID=gene-AB25_RS12305;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=AB25_RS12305;old_locus_tag=AB25_2680 NZ_JJMC01000043.1 Protein Homology CDS 94288 95373 . - 0 ID=cds-WP_032171007.1;Parent=gene-AB25_RS12305;Dbxref=GenBank:WP_032171007.1;Name=WP_032171007.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129642.1;locus_tag=AB25_RS12305;product=chorismate synthase;protein_id=WP_032171007.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 95408 96340 . - . ID=gene-AB25_RS12300;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=AB25_RS12300;old_locus_tag=AB25_2681 NZ_JJMC01000043.1 Protein Homology CDS 95408 96340 . - 0 ID=cds-WP_001295704.1;Parent=gene-AB25_RS12300;Dbxref=GenBank:WP_001295704.1;Name=WP_001295704.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129736.1;locus_tag=AB25_RS12300;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_001295704.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 96506 97057 . + . ID=gene-AB25_RS12295;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=AB25_RS12295;old_locus_tag=AB25_2682 NZ_JJMC01000043.1 Protein Homology CDS 96506 97057 . + 0 ID=cds-WP_000730806.1;Parent=gene-AB25_RS12295;Dbxref=GenBank:WP_000730806.1;Name=WP_000730806.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416834.1;locus_tag=AB25_RS12295;product=endonuclease SmrB;protein_id=WP_000730806.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 97179 98051 . - . ID=gene-AB25_RS12290;Name=AB25_RS12290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS12290;old_locus_tag=AB25_2683 NZ_JJMC01000043.1 Protein Homology CDS 97179 98051 . - 0 ID=cds-WP_001356216.1;Parent=gene-AB25_RS12290;Dbxref=GenBank:WP_001356216.1;Name=WP_001356216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001397279.1;locus_tag=AB25_RS12290;product=StfH/YfcO family fimbrial adhesin;protein_id=WP_001356216.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 98038 98562 . - . ID=gene-AB25_RS12285;Name=AB25_RS12285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS12285;old_locus_tag=AB25_2684 NZ_JJMC01000043.1 Protein Homology CDS 98038 98562 . - 0 ID=cds-WP_000730291.1;Parent=gene-AB25_RS12285;Dbxref=GenBank:WP_000730291.1;Name=WP_000730291.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708215.1;locus_tag=AB25_RS12285;product=fimbrial protein;protein_id=WP_000730291.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 98559 99029 . - . ID=gene-AB25_RS12280;Name=AB25_RS12280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS12280;old_locus_tag=AB25_2685 NZ_JJMC01000043.1 Protein Homology CDS 98559 99029 . - 0 ID=cds-WP_000822649.1;Parent=gene-AB25_RS12280;Dbxref=GenBank:WP_000822649.1;Name=WP_000822649.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708216.1;locus_tag=AB25_RS12280;product=fimbrial protein;protein_id=WP_000822649.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 99026 99574 . - . ID=gene-AB25_RS0125650;Name=AB25_RS0125650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0125650 NZ_JJMC01000043.1 Protein Homology CDS 99026 99574 . - 0 ID=cds-WP_000842082.1;Parent=gene-AB25_RS0125650;Dbxref=GenBank:WP_000842082.1;Name=WP_000842082.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708217.1;locus_tag=AB25_RS0125650;product=fimbrial protein;protein_id=WP_000842082.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 99549 100301 . - . ID=gene-AB25_RS12275;Name=yfcS;gbkey=Gene;gene=yfcS;gene_biotype=protein_coding;locus_tag=AB25_RS12275;old_locus_tag=AB25_2687 NZ_JJMC01000043.1 Protein Homology CDS 99549 100301 . - 0 ID=cds-WP_001392417.1;Parent=gene-AB25_RS12275;Dbxref=GenBank:WP_001392417.1;Name=WP_001392417.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;gene=yfcS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416839.1;locus_tag=AB25_RS12275;product=fimbria/pilus periplasmic chaperone;protein_id=WP_001392417.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 100321 102966 . - . ID=gene-AB25_RS12270;Name=yfcU;gbkey=Gene;gene=yfcU;gene_biotype=protein_coding;locus_tag=AB25_RS12270;old_locus_tag=AB25_2688 NZ_JJMC01000043.1 Protein Homology CDS 100321 102966 . - 0 ID=cds-WP_001356215.1;Parent=gene-AB25_RS12270;Dbxref=GenBank:WP_001356215.1;Name=WP_001356215.1;gbkey=CDS;gene=yfcU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112832.1;locus_tag=AB25_RS12270;product=fimbrial usher protein YfcU;protein_id=WP_001356215.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 103048 103611 . - . ID=gene-AB25_RS12265;Name=yfcV;gbkey=Gene;gene=yfcV;gene_biotype=protein_coding;locus_tag=AB25_RS12265;old_locus_tag=AB25_2689 NZ_JJMC01000043.1 Protein Homology CDS 103048 103611 . - 0 ID=cds-WP_000033328.1;Parent=gene-AB25_RS12265;Dbxref=GenBank:WP_000033328.1;Name=WP_000033328.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=yfcV;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708219.1;locus_tag=AB25_RS12265;product=fimbrial protein;protein_id=WP_000033328.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 104295 104780 . - . ID=gene-AB25_RS12260;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=AB25_RS12260;old_locus_tag=AB25_2690 NZ_JJMC01000043.1 Protein Homology CDS 104295 104780 . - 0 ID=cds-WP_001195819.1;Parent=gene-AB25_RS12260;Dbxref=GenBank:WP_001195819.1;Name=WP_001195819.1;Ontology_term=GO:0036211,GO:0101006,GO:0005737;gbkey=CDS;gene=sixA;go_component=cytoplasm|0005737||IEA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416842.1;locus_tag=AB25_RS12260;product=phosphohistidine phosphatase SixA;protein_id=WP_001195819.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 104983 107127 . - . ID=gene-AB25_RS12255;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=AB25_RS12255;old_locus_tag=AB25_2691 NZ_JJMC01000043.1 Protein Homology CDS 104983 107127 . - 0 ID=cds-WP_000426150.1;Parent=gene-AB25_RS12255;Dbxref=GenBank:WP_000426150.1;Name=WP_000426150.1;Ontology_term=GO:0009062,GO:0003857,GO:0004300,GO:0008692,GO:0051287;gbkey=CDS;gene=fadJ;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA,NAD binding|0051287||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311251.1;locus_tag=AB25_RS12255;product=fatty acid oxidation complex subunit alpha FadJ;protein_id=WP_000426150.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 107127 108437 . - . ID=gene-AB25_RS12250;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=protein_coding;locus_tag=AB25_RS12250;old_locus_tag=AB25_2692 NZ_JJMC01000043.1 Protein Homology CDS 107127 108437 . - 0 ID=cds-WP_000531917.1;Parent=gene-AB25_RS12250;Dbxref=GenBank:WP_000531917.1;Name=WP_000531917.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadI;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416844.1;locus_tag=AB25_RS12250;product=acetyl-CoA C-acyltransferase FadI;protein_id=WP_000531917.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 108618 108902 . - . ID=gene-AB25_RS12245;Name=yfcZ;gbkey=Gene;gene=yfcZ;gene_biotype=protein_coding;locus_tag=AB25_RS12245;old_locus_tag=AB25_2693 NZ_JJMC01000043.1 Protein Homology CDS 108618 108902 . - 0 ID=cds-WP_001296869.1;Parent=gene-AB25_RS12245;Dbxref=GenBank:WP_001296869.1;Name=WP_001296869.1;gbkey=CDS;gene=yfcZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129756.1;locus_tag=AB25_RS12245;product=YfcZ/YiiS family protein;protein_id=WP_001296869.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 109274 110614 . + . ID=gene-AB25_RS12240;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;locus_tag=AB25_RS12240;old_locus_tag=AB25_2694 NZ_JJMC01000043.1 Protein Homology CDS 109274 110614 . + 0 ID=cds-WP_001296861.1;Parent=gene-AB25_RS12240;Dbxref=GenBank:WP_001296861.1;Name=WP_001296861.1;gbkey=CDS;gene=fadL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708225.2;locus_tag=AB25_RS12240;product=long-chain fatty acid transporter FadL;protein_id=WP_001296861.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 110982 112040 . + . ID=gene-AB25_RS12235;Name=yfdF;gbkey=Gene;gene=yfdF;gene_biotype=protein_coding;locus_tag=AB25_RS12235;old_locus_tag=AB25_2695 NZ_JJMC01000043.1 Protein Homology CDS 110982 112040 . + 0 ID=cds-WP_032171009.1;Parent=gene-AB25_RS12235;Dbxref=GenBank:WP_032171009.1;Name=WP_032171009.1;gbkey=CDS;gene=yfdF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416847.1;locus_tag=AB25_RS12235;product=protein YfdF;protein_id=WP_032171009.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 112222 112977 . - . ID=gene-AB25_RS12230;Name=mlaA;gbkey=Gene;gene=mlaA;gene_biotype=protein_coding;locus_tag=AB25_RS12230;old_locus_tag=AB25_2696 NZ_JJMC01000043.1 Protein Homology CDS 112222 112977 . - 0 ID=cds-WP_000776768.1;Parent=gene-AB25_RS12230;Dbxref=GenBank:WP_000776768.1;Name=WP_000776768.1;Ontology_term=GO:0016020;gbkey=CDS;gene=mlaA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311256.1;locus_tag=AB25_RS12230;product=phospholipid-binding lipoprotein MlaA;protein_id=WP_000776768.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 113272 114204 . + . ID=gene-AB25_RS12225;Name=yfdC;gbkey=Gene;gene=yfdC;gene_biotype=protein_coding;locus_tag=AB25_RS12225;old_locus_tag=AB25_2698 NZ_JJMC01000043.1 Protein Homology CDS 113272 114204 . + 0 ID=cds-WP_000368131.1;Parent=gene-AB25_RS12225;Dbxref=GenBank:WP_000368131.1;Name=WP_000368131.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yfdC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311257.1;locus_tag=AB25_RS12225;product=formate/nitrite transporter family protein;protein_id=WP_000368131.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 114280 114354 . + . ID=gene-AB25_RS12220;Name=AB25_RS12220;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS12220;old_locus_tag=AB25_2699 NZ_JJMC01000043.1 tRNAscan-SE tRNA 114280 114354 . + . ID=rna-AB25_RS12220;Parent=gene-AB25_RS12220;anticodon=(pos:114313..114315);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS12220;product=tRNA-Arg NZ_JJMC01000043.1 tRNAscan-SE exon 114280 114354 . + . ID=exon-AB25_RS12220-1;Parent=rna-AB25_RS12220;anticodon=(pos:114313..114315);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS12220;product=tRNA-Arg NZ_JJMC01000043.1 RefSeq pseudogene 114796 116043 . - . ID=gene-AB25_RS12215;Name=AB25_RS12215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS12215;old_locus_tag=AB25_2700;pseudo=true NZ_JJMC01000043.1 Protein Homology CDS 114796 116043 . - 0 ID=cds-AB25_RS12215;Parent=gene-AB25_RS12215;Note=internal stop;Ontology_term=GO:0008643,GO:0005351,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311268.1;locus_tag=AB25_RS12215;product=oligosaccharide MFS transporter;pseudo=true;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 116115 117029 . - . ID=gene-AB25_RS12205;Name=AB25_RS12205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS12205;old_locus_tag=AB25_2702 NZ_JJMC01000043.1 Protein Homology CDS 116115 117029 . - 0 ID=cds-WP_032171010.1;Parent=gene-AB25_RS12205;Dbxref=GenBank:WP_032171010.1;Name=WP_032171010.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311269.1;locus_tag=AB25_RS12205;product=aminoimidazole riboside kinase;protein_id=WP_032171010.1;transl_table=11 NZ_JJMC01000043.1 RefSeq gene 117092 117345 . + . ID=gene-AB25_RS27210;Name=AB25_RS27210;end_range=117345,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS27210;old_locus_tag=AB25_2703;partial=true NZ_JJMC01000043.1 Protein Homology CDS 117092 117345 . + 0 ID=cds-WP_004992282.1;Parent=gene-AB25_RS27210;Dbxref=GenBank:WP_004992282.1;Name=WP_004992282.1;end_range=117345,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706683.1;locus_tag=AB25_RS27210;partial=true;product=IS4 family transposase;protein_id=WP_004992282.1;transl_table=11 ##sequence-region NZ_JJMC01000044.1 1 1200 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000044.1 RefSeq region 1 1200 . + . ID=NZ_JJMC01000044.1:1..1200;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000044.1 RefSeq gene 75 200 . + . ID=gene-AB25_RS27365;Name=AB25_RS27365;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AB25_RS27365 NZ_JJMC01000044.1 cmsearch ncRNA 75 200 . + . ID=rna-AB25_RS27365;Parent=gene-AB25_RS27365;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS27365;product=RtT sRNA NZ_JJMC01000044.1 cmsearch exon 75 200 . + . ID=exon-AB25_RS27365-1;Parent=rna-AB25_RS27365;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS27365;product=RtT sRNA NZ_JJMC01000044.1 RefSeq gene 449 1200 . + . ID=gene-AB25_RS12200;Name=nadA;end_range=1200,.;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=AB25_RS12200;old_locus_tag=AB25_2704;partial=true NZ_JJMC01000044.1 Protein Homology CDS 449 1200 . + 0 ID=cds-WP_032296031.1;Parent=gene-AB25_RS12200;Dbxref=GenBank:WP_032296031.1;Name=WP_032296031.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;end_range=1200,.;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415271.1;locus_tag=AB25_RS12200;partial=true;product=quinolinate synthase NadA;protein_id=WP_032296031.1;transl_table=11 ##sequence-region NZ_JJMC01000045.1 1 177804 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000045.1 RefSeq region 1 177804 . + . ID=NZ_JJMC01000045.1:1..177804;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000045.1 RefSeq pseudogene 1 294 . + . ID=gene-AB25_RS12195;Name=AB25_RS12195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS12195;old_locus_tag=AB25_2705;partial=true;pseudo=true;start_range=.,1 NZ_JJMC01000045.1 Protein Homology CDS 1 294 . + 0 ID=cds-AB25_RS12195;Parent=gene-AB25_RS12195;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707145.1;locus_tag=AB25_RS12195;partial=true;product=IS4 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 539 1972 . + . ID=gene-AB25_RS12190;Name=cscA;gbkey=Gene;gene=cscA;gene_biotype=protein_coding;locus_tag=AB25_RS12190;old_locus_tag=AB25_2706 NZ_JJMC01000045.1 Protein Homology CDS 539 1972 . + 0 ID=cds-WP_000194515.1;Parent=gene-AB25_RS12190;Dbxref=GenBank:WP_000194515.1;Name=WP_000194515.1;gbkey=CDS;gene=cscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708234.2;locus_tag=AB25_RS12190;product=sucrose-6-phosphate hydrolase;protein_id=WP_000194515.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 1980 2975 . - . ID=gene-AB25_RS12185;Name=AB25_RS12185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS12185;old_locus_tag=AB25_2707 NZ_JJMC01000045.1 Protein Homology CDS 1980 2975 . - 0 ID=cds-WP_001315771.1;Parent=gene-AB25_RS12185;Dbxref=GenBank:WP_001315771.1;Name=WP_001315771.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005088955.1;locus_tag=AB25_RS12185;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_001315771.1;transl_table=11 NZ_JJMC01000045.1 RefSeq pseudogene 3218 3436 . + . ID=gene-AB25_RS12180;Name=AB25_RS12180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS12180;old_locus_tag=AB25_2708;partial=true;pseudo=true;start_range=.,3218 NZ_JJMC01000045.1 Protein Homology CDS 3218 3436 . + 0 ID=cds-AB25_RS12180;Parent=gene-AB25_RS12180;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416866.1;locus_tag=AB25_RS12180;partial=true;product=D-serine transporter DsdX;pseudo=true;start_range=.,3218;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 3454 4782 . + . ID=gene-AB25_RS12175;Name=dsdA;gbkey=Gene;gene=dsdA;gene_biotype=protein_coding;locus_tag=AB25_RS12175;old_locus_tag=AB25_2709 NZ_JJMC01000045.1 Protein Homology CDS 3454 4782 . + 0 ID=cds-WP_000426427.1;Parent=gene-AB25_RS12175;Dbxref=GenBank:WP_000426427.1;Name=WP_000426427.1;Ontology_term=GO:0046416,GO:0008721,GO:0030170;gbkey=CDS;gene=dsdA;go_function=D-serine ammonia-lyase activity|0008721||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=D-amino acid metabolic process|0046416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416867.1;locus_tag=AB25_RS12175;product=D-serine ammonia-lyase;protein_id=WP_000426427.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 4890 6428 . - . ID=gene-AB25_RS12170;Name=emrY;gbkey=Gene;gene=emrY;gene_biotype=protein_coding;locus_tag=AB25_RS12170;old_locus_tag=AB25_2710 NZ_JJMC01000045.1 Protein Homology CDS 4890 6428 . - 0 ID=cds-WP_001018713.1;Parent=gene-AB25_RS12170;Dbxref=GenBank:WP_001018713.1;Name=WP_001018713.1;gbkey=CDS;gene=emrY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416868.1;locus_tag=AB25_RS12170;product=multidrug efflux MFS transporter permease subunit EmrY;protein_id=WP_001018713.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 6428 7591 . - . ID=gene-AB25_RS12165;Name=emrK;gbkey=Gene;gene=emrK;gene_biotype=protein_coding;locus_tag=AB25_RS12165;old_locus_tag=AB25_2711 NZ_JJMC01000045.1 Protein Homology CDS 6428 7591 . - 0 ID=cds-WP_000435166.1;Parent=gene-AB25_RS12165;Dbxref=GenBank:WP_000435166.1;Name=WP_000435166.1;gbkey=CDS;gene=emrK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001587635.1;locus_tag=AB25_RS12165;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrK;protein_id=WP_000435166.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 8007 8621 . + . ID=gene-AB25_RS12160;Name=evgA;gbkey=Gene;gene=evgA;gene_biotype=protein_coding;locus_tag=AB25_RS12160;old_locus_tag=AB25_2712 NZ_JJMC01000045.1 Protein Homology CDS 8007 8621 . + 0 ID=cds-WP_000991370.1;Parent=gene-AB25_RS12160;Dbxref=GenBank:WP_000991370.1;Name=WP_000991370.1;gbkey=CDS;gene=evgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311275.1;locus_tag=AB25_RS12160;product=acid-sensing system DNA-binding response regulator EvgA;protein_id=WP_000991370.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 8626 12219 . + . ID=gene-AB25_RS12155;Name=evgS;gbkey=Gene;gene=evgS;gene_biotype=protein_coding;locus_tag=AB25_RS12155;old_locus_tag=AB25_2713 NZ_JJMC01000045.1 Protein Homology CDS 8626 12219 . + 0 ID=cds-WP_001348569.1;Parent=gene-AB25_RS12155;Dbxref=GenBank:WP_001348569.1;Name=WP_001348569.1;Ontology_term=GO:0010447,GO:0004673;gbkey=CDS;gene=evgS;go_function=protein histidine kinase activity|0004673||IEA;go_process=response to acidic pH|0010447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708241.1;locus_tag=AB25_RS12155;product=acid-sensing system histidine kinase EvgS;protein_id=WP_001348569.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 12275 13420 . - . ID=gene-AB25_RS12150;Name=yfdE;gbkey=Gene;gene=yfdE;gene_biotype=protein_coding;locus_tag=AB25_RS12150;old_locus_tag=AB25_2714 NZ_JJMC01000045.1 Protein Homology CDS 12275 13420 . - 0 ID=cds-WP_001356214.1;Parent=gene-AB25_RS12150;Dbxref=GenBank:WP_001356214.1;Name=WP_001356214.1;gbkey=CDS;gene=yfdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416872.4;locus_tag=AB25_RS12150;product=CoA:oxalate CoA-transferase;protein_id=WP_001356214.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 13494 14438 . - . ID=gene-AB25_RS12145;Name=yfdV;gbkey=Gene;gene=yfdV;gene_biotype=protein_coding;locus_tag=AB25_RS12145;old_locus_tag=AB25_2715 NZ_JJMC01000045.1 Protein Homology CDS 13494 14438 . - 0 ID=cds-WP_000955028.1;Parent=gene-AB25_RS12145;Dbxref=GenBank:WP_000955028.1;Name=WP_000955028.1;gbkey=CDS;gene=yfdV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311279.1;locus_tag=AB25_RS12145;product=transporter YfdV;protein_id=WP_000955028.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 14508 16202 . - . ID=gene-AB25_RS12140;Name=oxc;gbkey=Gene;gene=oxc;gene_biotype=protein_coding;locus_tag=AB25_RS12140;old_locus_tag=AB25_2716 NZ_JJMC01000045.1 Protein Homology CDS 14508 16202 . - 0 ID=cds-WP_001283499.1;Parent=gene-AB25_RS12140;Dbxref=GenBank:WP_001283499.1;Name=WP_001283499.1;Ontology_term=GO:0033611,GO:0000287,GO:0008949,GO:0030976;gbkey=CDS;gene=oxc;go_function=magnesium ion binding|0000287||IEA,oxalyl-CoA decarboxylase activity|0008949||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=oxalate catabolic process|0033611||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311280.1;locus_tag=AB25_RS12140;product=oxalyl-CoA decarboxylase;protein_id=WP_001283499.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 16256 17506 . - . ID=gene-AB25_RS12135;Name=frc;gbkey=Gene;gene=frc;gene_biotype=protein_coding;locus_tag=AB25_RS12135;old_locus_tag=AB25_2717 NZ_JJMC01000045.1 Protein Homology CDS 16256 17506 . - 0 ID=cds-WP_000106759.1;Parent=gene-AB25_RS12135;Dbxref=GenBank:WP_000106759.1;Name=WP_000106759.1;Ontology_term=GO:0033611,GO:0033608;gbkey=CDS;gene=frc;go_function=formyl-CoA transferase activity|0033608||IEA;go_process=oxalate catabolic process|0033611||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416875.1;locus_tag=AB25_RS12135;product=formyl-CoA transferase;protein_id=WP_000106759.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 18019 18651 . - . ID=gene-AB25_RS12130;Name=yfdX;gbkey=Gene;gene=yfdX;gene_biotype=protein_coding;locus_tag=AB25_RS12130;old_locus_tag=AB25_2718 NZ_JJMC01000045.1 Protein Homology CDS 18019 18651 . - 0 ID=cds-WP_000825604.1;Parent=gene-AB25_RS12130;Dbxref=GenBank:WP_000825604.1;Name=WP_000825604.1;gbkey=CDS;gene=yfdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708246.1;locus_tag=AB25_RS12130;product=YfdX family protein;protein_id=WP_000825604.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 18947 19222 . + . ID=gene-AB25_RS0125675;Name=ypdI;gbkey=Gene;gene=ypdI;gene_biotype=protein_coding;locus_tag=AB25_RS0125675 NZ_JJMC01000045.1 Protein Homology CDS 18947 19222 . + 0 ID=cds-WP_000867637.1;Parent=gene-AB25_RS0125675;Dbxref=GenBank:WP_000867637.1;Name=WP_000867637.1;gbkey=CDS;gene=ypdI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439267.1;locus_tag=AB25_RS0125675;product=colanic acid biosynthesis lipoprotein YpdI;protein_id=WP_000867637.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 19299 19541 . - . ID=gene-AB25_RS12125;Name=yfdY;gbkey=Gene;gene=yfdY;gene_biotype=protein_coding;locus_tag=AB25_RS12125;old_locus_tag=AB25_2720 NZ_JJMC01000045.1 Protein Homology CDS 19299 19541 . - 0 ID=cds-WP_000639883.1;Parent=gene-AB25_RS12125;Dbxref=GenBank:WP_000639883.1;Name=WP_000639883.1;gbkey=CDS;gene=yfdY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708247.1;locus_tag=AB25_RS12125;product=YfdY family protein;protein_id=WP_000639883.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 19894 20814 . + . ID=gene-AB25_RS12120;Name=lpxP;gbkey=Gene;gene=lpxP;gene_biotype=protein_coding;locus_tag=AB25_RS12120;old_locus_tag=AB25_2721 NZ_JJMC01000045.1 Protein Homology CDS 19894 20814 . + 0 ID=cds-WP_000484404.1;Parent=gene-AB25_RS12120;Dbxref=GenBank:WP_000484404.1;Name=WP_000484404.1;Ontology_term=GO:0009409,GO:0036104,GO:0008951,GO:0016020;gbkey=CDS;gene=lpxP;go_component=membrane|0016020||IEA;go_function=palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity|0008951||IEA;go_process=response to cold|0009409||IEA,Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311285.2;locus_tag=AB25_RS12120;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;protein_id=WP_000484404.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 21170 21241 . + . ID=gene-AB25_RS30440;Name=ypdK;gbkey=Gene;gene=ypdK;gene_biotype=protein_coding;locus_tag=AB25_RS30440 NZ_JJMC01000045.1 Protein Homology CDS 21170 21241 . + 0 ID=cds-WP_010723117.1;Parent=gene-AB25_RS30440;Dbxref=GenBank:WP_010723117.1;Name=WP_010723117.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ypdK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_077777854.1;locus_tag=AB25_RS30440;product=membrane protein YpdK;protein_id=WP_010723117.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 21306 22544 . - . ID=gene-AB25_RS12115;Name=alaC;gbkey=Gene;gene=alaC;gene_biotype=protein_coding;locus_tag=AB25_RS12115;old_locus_tag=AB25_2723 NZ_JJMC01000045.1 Protein Homology CDS 21306 22544 . - 0 ID=cds-WP_000785931.1;Parent=gene-AB25_RS12115;Dbxref=GenBank:WP_000785931.1;Name=WP_000785931.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=alaC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416880.1;locus_tag=AB25_RS12115;product=alanine transaminase;protein_id=WP_000785931.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 22921 24618 . + . ID=gene-AB25_RS12110;Name=ypdA;gbkey=Gene;gene=ypdA;gene_biotype=protein_coding;locus_tag=AB25_RS12110;old_locus_tag=AB25_2725 NZ_JJMC01000045.1 Protein Homology CDS 22921 24618 . + 0 ID=cds-WP_000544359.1;Parent=gene-AB25_RS12110;Dbxref=GenBank:WP_000544359.1;Name=WP_000544359.1;gbkey=CDS;gene=ypdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311287.1;locus_tag=AB25_RS12110;product=two-component system sensor histidine kinase YpdA;protein_id=WP_000544359.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 24633 25367 . + . ID=gene-AB25_RS12105;Name=ypdB;gbkey=Gene;gene=ypdB;gene_biotype=protein_coding;locus_tag=AB25_RS12105;old_locus_tag=AB25_2726 NZ_JJMC01000045.1 Protein Homology CDS 24633 25367 . + 0 ID=cds-WP_001295458.1;Parent=gene-AB25_RS12105;Dbxref=GenBank:WP_001295458.1;Name=WP_001295458.1;gbkey=CDS;gene=ypdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311288.1;locus_tag=AB25_RS12105;product=two-component system response regulator YpdB;protein_id=WP_001295458.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 25380 26237 . + . ID=gene-AB25_RS12100;Name=ypdC;gbkey=Gene;gene=ypdC;gene_biotype=protein_coding;locus_tag=AB25_RS12100;old_locus_tag=AB25_2727 NZ_JJMC01000045.1 Protein Homology CDS 25380 26237 . + 0 ID=cds-WP_000646844.1;Parent=gene-AB25_RS12100;Dbxref=GenBank:WP_000646844.1;Name=WP_000646844.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=ypdC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311289.1;locus_tag=AB25_RS12100;product=AraC family transcriptional regulator;protein_id=WP_000646844.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 26240 28735 . - . ID=gene-AB25_RS12095;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=AB25_RS12095;old_locus_tag=AB25_2728 NZ_JJMC01000045.1 Protein Homology CDS 26240 28735 . - 0 ID=cds-WP_000955843.1;Parent=gene-AB25_RS12095;Dbxref=GenBank:WP_000955843.1;Name=WP_000955843.1;Ontology_term=GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708251.1;locus_tag=AB25_RS12095;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_000955843.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 28760 29797 . - . ID=gene-AB25_RS12090;Name=ypdE;gbkey=Gene;gene=ypdE;gene_biotype=protein_coding;locus_tag=AB25_RS12090;old_locus_tag=AB25_2729 NZ_JJMC01000045.1 Protein Homology CDS 28760 29797 . - 0 ID=cds-WP_000366023.1;Parent=gene-AB25_RS12090;Dbxref=GenBank:WP_000366023.1;Name=WP_000366023.1;gbkey=CDS;gene=ypdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311291.1;locus_tag=AB25_RS12090;product=aminopeptidase;protein_id=WP_000366023.1;transl_table=11 NZ_JJMC01000045.1 RefSeq pseudogene 29860 30881 . - . ID=gene-AB25_RS12085;Name=ypdF;gbkey=Gene;gene=ypdF;gene_biotype=pseudogene;locus_tag=AB25_RS12085;old_locus_tag=AB25_2730;partial=true;pseudo=true;start_range=.,29860 NZ_JJMC01000045.1 Protein Homology CDS 29860 30881 . - 0 ID=cds-AB25_RS12085;Parent=gene-AB25_RS12085;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016787;gbkey=CDS;gene=ypdF;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF013486.6;locus_tag=AB25_RS12085;partial=true;product=aminopeptidase;pseudo=true;start_range=.,29860;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 30896 32143 . - . ID=gene-AB25_RS12075;Name=fryC;gbkey=Gene;gene=fryC;gene_biotype=protein_coding;locus_tag=AB25_RS12075;old_locus_tag=AB25_2732 NZ_JJMC01000045.1 Protein Homology CDS 30896 32143 . - 0 ID=cds-WP_000985337.1;Parent=gene-AB25_RS12075;Dbxref=GenBank:WP_000985337.1;Name=WP_000985337.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=fryC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311293.1;locus_tag=AB25_RS12075;product=PTS fructose transporter subunit IIC;protein_id=WP_000985337.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 32165 32491 . - . ID=gene-AB25_RS12070;Name=fryB;gbkey=Gene;gene=fryB;gene_biotype=protein_coding;locus_tag=AB25_RS12070;old_locus_tag=AB25_2733 NZ_JJMC01000045.1 Protein Homology CDS 32165 32491 . - 0 ID=cds-WP_000038456.1;Parent=gene-AB25_RS12070;Dbxref=GenBank:WP_000038456.1;Name=WP_000038456.1;Ontology_term=GO:0009401,GO:0016310,GO:0016301,GO:0022877,GO:0090563,GO:0090582;gbkey=CDS;gene=fryB;go_function=kinase activity|0016301||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA,protein-phosphocysteine-sugar phosphotransferase activity|0090563||IEA,protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity|0090582||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311294.1;locus_tag=AB25_RS12070;product=PTS fructose transporter subunit IIB;protein_id=WP_000038456.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 32710 33675 . - . ID=gene-AB25_RS12065;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=AB25_RS12065;old_locus_tag=AB25_2734 NZ_JJMC01000045.1 Protein Homology CDS 32710 33675 . - 0 ID=cds-WP_000170352.1;Parent=gene-AB25_RS12065;Dbxref=GenBank:WP_000170352.1;Name=WP_000170352.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005524,GO:0005536;gbkey=CDS;gene=glk;go_function=glucokinase activity|0004340||IEA,ATP binding|0005524||IEA,D-glucose binding|0005536||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311295.1;locus_tag=AB25_RS12065;product=glucokinase;protein_id=WP_000170352.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 33879 35135 . + . ID=gene-AB25_RS12060;Name=yfeO;gbkey=Gene;gene=yfeO;gene_biotype=protein_coding;locus_tag=AB25_RS12060;old_locus_tag=AB25_2735 NZ_JJMC01000045.1 Protein Homology CDS 33879 35135 . + 0 ID=cds-WP_000903152.1;Parent=gene-AB25_RS12060;Dbxref=GenBank:WP_000903152.1;Name=WP_000903152.1;Ontology_term=GO:0005247;gbkey=CDS;gene=yfeO;go_function=voltage-gated chloride channel activity|0005247||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311296.1;locus_tag=AB25_RS12060;product=ion channel protein;protein_id=WP_000903152.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 35250 35576 . + . ID=gene-AB25_RS12055;Name=ypeC;gbkey=Gene;gene=ypeC;gene_biotype=protein_coding;locus_tag=AB25_RS12055;old_locus_tag=AB25_2736 NZ_JJMC01000045.1 Protein Homology CDS 35250 35576 . + 0 ID=cds-WP_000490072.1;Parent=gene-AB25_RS12055;Dbxref=GenBank:WP_000490072.1;Name=WP_000490072.1;gbkey=CDS;gene=ypeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311297.1;locus_tag=AB25_RS12055;product=DUF2502 domain-containing protein YpeC;protein_id=WP_000490072.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 35717 36955 . - . ID=gene-AB25_RS12050;Name=mntH;gbkey=Gene;gene=mntH;gene_biotype=protein_coding;locus_tag=AB25_RS12050;old_locus_tag=AB25_2737 NZ_JJMC01000045.1 Protein Homology CDS 35717 36955 . - 0 ID=cds-WP_024203087.1;Parent=gene-AB25_RS12050;Dbxref=GenBank:WP_024203087.1;Name=WP_024203087.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mntH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311298.1;locus_tag=AB25_RS12050;product=Nramp family divalent metal transporter;protein_id=WP_024203087.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 36936 37025 . - . ID=gene-AB25_RS32985;Name=AB25_RS32985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32985 NZ_JJMC01000045.1 Protein Homology CDS 36936 37025 . - 0 ID=cds-WP_240811045.1;Parent=gene-AB25_RS32985;Dbxref=GenBank:WP_240811045.1;Name=WP_240811045.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049535.1;locus_tag=AB25_RS32985;product=protein YpeD;protein_id=WP_240811045.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 37291 38493 . + . ID=gene-AB25_RS12045;Name=nupC;gbkey=Gene;gene=nupC;gene_biotype=protein_coding;locus_tag=AB25_RS12045;old_locus_tag=AB25_2738 NZ_JJMC01000045.1 Protein Homology CDS 37291 38493 . + 0 ID=cds-WP_000376337.1;Parent=gene-AB25_RS12045;Dbxref=GenBank:WP_000376337.1;Name=WP_000376337.1;gbkey=CDS;gene=nupC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416894.1;locus_tag=AB25_RS12045;product=nucleoside permease NupC;protein_id=WP_000376337.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 38543 40732 . - . ID=gene-AB25_RS12040;Name=pdeA;gbkey=Gene;gene=pdeA;gene_biotype=protein_coding;locus_tag=AB25_RS12040;old_locus_tag=AB25_2739 NZ_JJMC01000045.1 Protein Homology CDS 38543 40732 . - 0 ID=cds-WP_001299660.1;Parent=gene-AB25_RS12040;Dbxref=GenBank:WP_001299660.1;Name=WP_001299660.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621,GO:0071111;gbkey=CDS;gene=pdeA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416896.4;locus_tag=AB25_RS12040;product=bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_001299660.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 40940 41015 . - . ID=gene-AB25_RS12035;Name=AB25_RS12035;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS12035;old_locus_tag=AB25_2740 NZ_JJMC01000045.1 tRNAscan-SE tRNA 40940 41015 . - . ID=rna-AB25_RS12035;Parent=gene-AB25_RS12035;anticodon=(pos:complement(40980..40982));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS12035;product=tRNA-Ala NZ_JJMC01000045.1 tRNAscan-SE exon 40940 41015 . - . ID=exon-AB25_RS12035-1;Parent=rna-AB25_RS12035;anticodon=(pos:complement(40980..40982));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS12035;product=tRNA-Ala NZ_JJMC01000045.1 RefSeq gene 41055 41130 . - . ID=gene-AB25_RS12030;Name=AB25_RS12030;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS12030;old_locus_tag=AB25_2741 NZ_JJMC01000045.1 tRNAscan-SE tRNA 41055 41130 . - . ID=rna-AB25_RS12030;Parent=gene-AB25_RS12030;anticodon=(pos:complement(41095..41097));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS12030;product=tRNA-Ala NZ_JJMC01000045.1 tRNAscan-SE exon 41055 41130 . - . ID=exon-AB25_RS12030-1;Parent=rna-AB25_RS12030;anticodon=(pos:complement(41095..41097));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS12030;product=tRNA-Ala NZ_JJMC01000045.1 RefSeq gene 41351 41710 . + . ID=gene-AB25_RS12025;Name=yfeC;gbkey=Gene;gene=yfeC;gene_biotype=protein_coding;locus_tag=AB25_RS12025;old_locus_tag=AB25_2742 NZ_JJMC01000045.1 Protein Homology CDS 41351 41710 . + 0 ID=cds-WP_000472021.1;Parent=gene-AB25_RS12025;Dbxref=GenBank:WP_000472021.1;Name=WP_000472021.1;gbkey=CDS;gene=yfeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311301.3;locus_tag=AB25_RS12025;product=YfeC-like transcriptional regulator;protein_id=WP_000472021.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 41712 42104 . + . ID=gene-AB25_RS12020;Name=yfeD;gbkey=Gene;gene=yfeD;gene_biotype=protein_coding;locus_tag=AB25_RS12020;old_locus_tag=AB25_2743 NZ_JJMC01000045.1 Protein Homology CDS 41712 42104 . + 0 ID=cds-WP_000826503.1;Parent=gene-AB25_RS12020;Dbxref=GenBank:WP_000826503.1;Name=WP_000826503.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=yfeD;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416898.3;locus_tag=AB25_RS12020;product=MerR family transcriptional regulator;protein_id=WP_000826503.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 42156 43571 . - . ID=gene-AB25_RS12015;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=AB25_RS12015;old_locus_tag=AB25_2744 NZ_JJMC01000045.1 Protein Homology CDS 42156 43571 . - 0 ID=cds-WP_032171022.1;Parent=gene-AB25_RS12015;Dbxref=GenBank:WP_032171022.1;Name=WP_032171022.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416899.1;locus_tag=AB25_RS12015;product=glutamate--tRNA ligase;protein_id=WP_032171022.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 43830 43905 . + . ID=gene-AB25_RS12010;Name=AB25_RS12010;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS12010;old_locus_tag=AB25_2746 NZ_JJMC01000045.1 tRNAscan-SE tRNA 43830 43905 . + . ID=rna-AB25_RS12010;Parent=gene-AB25_RS12010;anticodon=(pos:43863..43865);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS12010;product=tRNA-Val NZ_JJMC01000045.1 tRNAscan-SE exon 43830 43905 . + . ID=exon-AB25_RS12010-1;Parent=rna-AB25_RS12010;anticodon=(pos:43863..43865);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS12010;product=tRNA-Val NZ_JJMC01000045.1 RefSeq gene 43950 44025 . + . ID=gene-AB25_RS12005;Name=AB25_RS12005;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS12005;old_locus_tag=AB25_2747 NZ_JJMC01000045.1 tRNAscan-SE tRNA 43950 44025 . + . ID=rna-AB25_RS12005;Parent=gene-AB25_RS12005;anticodon=(pos:43983..43985);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS12005;product=tRNA-Val NZ_JJMC01000045.1 tRNAscan-SE exon 43950 44025 . + . ID=exon-AB25_RS12005-1;Parent=rna-AB25_RS12005;anticodon=(pos:43983..43985);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS12005;product=tRNA-Val NZ_JJMC01000045.1 RefSeq gene 44070 44145 . + . ID=gene-AB25_RS12000;Name=AB25_RS12000;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS12000;old_locus_tag=AB25_2748 NZ_JJMC01000045.1 tRNAscan-SE tRNA 44070 44145 . + . ID=rna-AB25_RS12000;Parent=gene-AB25_RS12000;anticodon=(pos:44103..44105);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS12000;product=tRNA-Val NZ_JJMC01000045.1 tRNAscan-SE exon 44070 44145 . + . ID=exon-AB25_RS12000-1;Parent=rna-AB25_RS12000;anticodon=(pos:44103..44105);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS12000;product=tRNA-Val NZ_JJMC01000045.1 RefSeq gene 44190 44265 . + . ID=gene-AB25_RS11995;Name=AB25_RS11995;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS11995;old_locus_tag=AB25_2749 NZ_JJMC01000045.1 tRNAscan-SE tRNA 44190 44265 . + . ID=rna-AB25_RS11995;Parent=gene-AB25_RS11995;anticodon=(pos:44223..44225);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS11995;product=tRNA-Val NZ_JJMC01000045.1 tRNAscan-SE exon 44190 44265 . + . ID=exon-AB25_RS11995-1;Parent=rna-AB25_RS11995;anticodon=(pos:44223..44225);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS11995;product=tRNA-Val NZ_JJMC01000045.1 RefSeq gene 44310 44385 . + . ID=gene-AB25_RS11990;Name=AB25_RS11990;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS11990;old_locus_tag=AB25_2750 NZ_JJMC01000045.1 tRNAscan-SE tRNA 44310 44385 . + . ID=rna-AB25_RS11990;Parent=gene-AB25_RS11990;anticodon=(pos:44343..44345);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS11990;product=tRNA-Val NZ_JJMC01000045.1 tRNAscan-SE exon 44310 44385 . + . ID=exon-AB25_RS11990-1;Parent=rna-AB25_RS11990;anticodon=(pos:44343..44345);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS11990;product=tRNA-Val NZ_JJMC01000045.1 RefSeq gene 44432 44507 . + . ID=gene-AB25_RS11985;Name=AB25_RS11985;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS11985;old_locus_tag=AB25_2751 NZ_JJMC01000045.1 tRNAscan-SE tRNA 44432 44507 . + . ID=rna-AB25_RS11985;Parent=gene-AB25_RS11985;anticodon=(pos:44465..44467);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS11985;product=tRNA-Val NZ_JJMC01000045.1 tRNAscan-SE exon 44432 44507 . + . ID=exon-AB25_RS11985-1;Parent=rna-AB25_RS11985;anticodon=(pos:44465..44467);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS11985;product=tRNA-Val NZ_JJMC01000045.1 RefSeq gene 44554 44629 . + . ID=gene-AB25_RS11980;Name=AB25_RS11980;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS11980;old_locus_tag=AB25_2752 NZ_JJMC01000045.1 tRNAscan-SE tRNA 44554 44629 . + . ID=rna-AB25_RS11980;Parent=gene-AB25_RS11980;anticodon=(pos:44587..44589);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS11980;product=tRNA-Val NZ_JJMC01000045.1 tRNAscan-SE exon 44554 44629 . + . ID=exon-AB25_RS11980-1;Parent=rna-AB25_RS11980;anticodon=(pos:44587..44589);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS11980;product=tRNA-Val NZ_JJMC01000045.1 RefSeq gene 44632 44707 . + . ID=gene-AB25_RS11975;Name=AB25_RS11975;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS11975;old_locus_tag=AB25_2753 NZ_JJMC01000045.1 tRNAscan-SE tRNA 44632 44707 . + . ID=rna-AB25_RS11975;Parent=gene-AB25_RS11975;anticodon=(pos:44665..44667);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS11975;product=tRNA-Lys NZ_JJMC01000045.1 tRNAscan-SE exon 44632 44707 . + . ID=exon-AB25_RS11975-1;Parent=rna-AB25_RS11975;anticodon=(pos:44665..44667);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS11975;product=tRNA-Lys NZ_JJMC01000045.1 RefSeq gene 44738 44863 . + . ID=gene-AB25_RS27370;Name=AB25_RS27370;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AB25_RS27370 NZ_JJMC01000045.1 cmsearch ncRNA 44738 44863 . + . ID=rna-AB25_RS27370;Parent=gene-AB25_RS27370;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS27370;product=RtT sRNA NZ_JJMC01000045.1 cmsearch exon 44738 44863 . + . ID=exon-AB25_RS27370-1;Parent=rna-AB25_RS27370;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS27370;product=RtT sRNA NZ_JJMC01000045.1 RefSeq gene 44972 45856 . - . ID=gene-AB25_RS11970;Name=xapR;gbkey=Gene;gene=xapR;gene_biotype=protein_coding;locus_tag=AB25_RS11970;old_locus_tag=AB25_2754 NZ_JJMC01000045.1 Protein Homology CDS 44972 45856 . - 0 ID=cds-WP_001341600.1;Parent=gene-AB25_RS11970;Dbxref=GenBank:WP_001341600.1;Name=WP_001341600.1;gbkey=CDS;gene=xapR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416900.1;locus_tag=AB25_RS11970;product=DNA-binding transcriptional regulator XapR;protein_id=WP_001341600.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 45897 46055 . - . ID=gene-AB25_RS11965;Name=AB25_RS11965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS11965;old_locus_tag=AB25_2755 NZ_JJMC01000045.1 Protein Homology CDS 45897 46055 . - 0 ID=cds-WP_001392449.1;Parent=gene-AB25_RS11965;Dbxref=GenBank:WP_001392449.1;Name=WP_001392449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392449.1;locus_tag=AB25_RS11965;product=DUF1427 family protein;protein_id=WP_001392449.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 46108 47364 . - . ID=gene-AB25_RS11960;Name=xapB;gbkey=Gene;gene=xapB;gene_biotype=protein_coding;locus_tag=AB25_RS11960;old_locus_tag=AB25_2756 NZ_JJMC01000045.1 Protein Homology CDS 46108 47364 . - 0 ID=cds-WP_000020398.1;Parent=gene-AB25_RS11960;Dbxref=GenBank:WP_000020398.1;Name=WP_000020398.1;gbkey=CDS;gene=xapB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416901.1;locus_tag=AB25_RS11960;product=xanthosine/proton symporter XapB;protein_id=WP_000020398.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 47424 48257 . - . ID=gene-AB25_RS11955;Name=xapA;gbkey=Gene;gene=xapA;gene_biotype=protein_coding;locus_tag=AB25_RS11955;old_locus_tag=AB25_2757 NZ_JJMC01000045.1 Protein Homology CDS 47424 48257 . - 0 ID=cds-WP_000084573.1;Parent=gene-AB25_RS11955;Dbxref=GenBank:WP_000084573.1;Name=WP_000084573.1;Ontology_term=GO:0055086,GO:0004731,GO:0005737;gbkey=CDS;gene=xapA;go_component=cytoplasm|0005737||IEA;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing small molecule metabolic process|0055086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416902.1;locus_tag=AB25_RS11955;product=xanthosine phosphorylase;protein_id=WP_000084573.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 48506 49270 . + . ID=gene-AB25_RS11950;Name=yfeN;gbkey=Gene;gene=yfeN;gene_biotype=protein_coding;locus_tag=AB25_RS11950;old_locus_tag=AB25_2758 NZ_JJMC01000045.1 Protein Homology CDS 48506 49270 . + 0 ID=cds-WP_000716421.1;Parent=gene-AB25_RS11950;Dbxref=GenBank:WP_000716421.1;Name=WP_000716421.1;Ontology_term=GO:0009279;gbkey=CDS;gene=yfeN;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416903.1;locus_tag=AB25_RS11950;product=outer membrane protein OmpK;protein_id=WP_000716421.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 49309 50235 . - . ID=gene-AB25_RS11945;Name=yfeR;gbkey=Gene;gene=yfeR;gene_biotype=protein_coding;locus_tag=AB25_RS11945;old_locus_tag=AB25_2759 NZ_JJMC01000045.1 Protein Homology CDS 49309 50235 . - 0 ID=cds-WP_001109794.1;Parent=gene-AB25_RS11945;Dbxref=GenBank:WP_001109794.1;Name=WP_001109794.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;gene=yfeR;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416904.1;locus_tag=AB25_RS11945;product=LysR family transcriptional regulator;protein_id=WP_001109794.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 50325 51323 . + . ID=gene-AB25_RS11940;Name=yfeH;gbkey=Gene;gene=yfeH;gene_biotype=protein_coding;locus_tag=AB25_RS11940;old_locus_tag=AB25_2760 NZ_JJMC01000045.1 Protein Homology CDS 50325 51323 . + 0 ID=cds-WP_000765605.1;Parent=gene-AB25_RS11940;Dbxref=GenBank:WP_000765605.1;Name=WP_000765605.1;Ontology_term=GO:0006810,GO:0015293,GO:0016020;gbkey=CDS;gene=yfeH;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311309.1;locus_tag=AB25_RS11940;product=bile acid:sodium symporter family protein;protein_id=WP_000765605.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 51320 51538 . - . ID=gene-AB25_RS11935;Name=ypeB;gbkey=Gene;gene=ypeB;gene_biotype=protein_coding;locus_tag=AB25_RS11935;old_locus_tag=AB25_2761 NZ_JJMC01000045.1 Protein Homology CDS 51320 51538 . - 0 ID=cds-WP_000410201.1;Parent=gene-AB25_RS11935;Dbxref=GenBank:WP_000410201.1;Name=WP_000410201.1;gbkey=CDS;gene=ypeB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588464.1;locus_tag=AB25_RS11935;product=DUF3820 family protein;protein_id=WP_000410201.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 51540 53555 . - . ID=gene-AB25_RS11930;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=AB25_RS11930;old_locus_tag=AB25_2762 NZ_JJMC01000045.1 Protein Homology CDS 51540 53555 . - 0 ID=cds-WP_000443665.1;Parent=gene-AB25_RS11930;Dbxref=GenBank:WP_000443665.1;Name=WP_000443665.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416906.1;locus_tag=AB25_RS11930;product=NAD-dependent DNA ligase LigA;protein_id=WP_000443665.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 53626 54612 . - . ID=gene-AB25_RS11925;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=AB25_RS11925;old_locus_tag=AB25_2763 NZ_JJMC01000045.1 Protein Homology CDS 53626 54612 . - 0 ID=cds-WP_001297862.1;Parent=gene-AB25_RS11925;Dbxref=GenBank:WP_001297862.1;Name=WP_001297862.1;Ontology_term=GO:0000917,GO:0005515,GO:0016020;gbkey=CDS;gene=zipA;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311311.1;locus_tag=AB25_RS11925;product=cell division protein ZipA;protein_id=WP_001297862.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 54842 55603 . + . ID=gene-AB25_RS11920;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=AB25_RS11920;old_locus_tag=AB25_2764 NZ_JJMC01000045.1 Protein Homology CDS 54842 55603 . + 0 ID=cds-WP_000254843.1;Parent=gene-AB25_RS11920;Dbxref=GenBank:WP_000254843.1;Name=WP_000254843.1;Ontology_term=GO:0000103,GO:0015116,GO:0005886;gbkey=CDS;gene=cysZ;go_component=plasma membrane|0005886||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311312.1;locus_tag=AB25_RS11920;product=sulfate transporter CysZ;protein_id=WP_000254843.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 55788 56759 . + . ID=gene-AB25_RS11915;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=AB25_RS11915;old_locus_tag=AB25_2765 NZ_JJMC01000045.1 Protein Homology CDS 55788 56759 . + 0 ID=cds-WP_000034402.1;Parent=gene-AB25_RS11915;Dbxref=GenBank:WP_000034402.1;Name=WP_000034402.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=AB25_RS11915;product=cysteine synthase A;protein_id=WP_000034402.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 57143 57400 . + . ID=gene-AB25_RS11910;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=AB25_RS11910;old_locus_tag=AB25_2766 NZ_JJMC01000045.1 Protein Homology CDS 57143 57400 . + 0 ID=cds-WP_000487600.1;Parent=gene-AB25_RS11910;Dbxref=GenBank:WP_000487600.1;Name=WP_000487600.1;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=AB25_RS11910;product=phosphocarrier protein Hpr;protein_id=WP_000487600.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 57445 59172 . + . ID=gene-AB25_RS11905;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=AB25_RS11905;old_locus_tag=AB25_2767 NZ_JJMC01000045.1 Protein Homology CDS 57445 59172 . + 0 ID=cds-WP_000623136.1;Parent=gene-AB25_RS11905;Dbxref=GenBank:WP_000623136.1;Name=WP_000623136.1;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311315.1;locus_tag=AB25_RS11905;product=phosphoenolpyruvate-protein phosphotransferase PtsI;protein_id=WP_000623136.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 59213 59722 . + . ID=gene-AB25_RS11900;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=AB25_RS11900;old_locus_tag=AB25_2768 NZ_JJMC01000045.1 Protein Homology CDS 59213 59722 . + 0 ID=cds-WP_000522247.1;Parent=gene-AB25_RS11900;Dbxref=GenBank:WP_000522247.1;Name=WP_000522247.1;Ontology_term=GO:0009401;gbkey=CDS;gene=crr;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833547.1;locus_tag=AB25_RS11900;product=PTS glucose transporter subunit IIA;protein_id=WP_000522247.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 59764 60615 . - . ID=gene-AB25_RS11895;Name=pdxK;gbkey=Gene;gene=pdxK;gene_biotype=protein_coding;gene_synonym=thiJ;locus_tag=AB25_RS11895;old_locus_tag=AB25_2769 NZ_JJMC01000045.1 Protein Homology CDS 59764 60615 . - 0 ID=cds-WP_000096660.1;Parent=gene-AB25_RS11895;Dbxref=GenBank:WP_000096660.1;Name=WP_000096660.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxK;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708273.1;locus_tag=AB25_RS11895;product=pyridoxine/pyridoxal/pyridoxamine kinase;protein_id=WP_000096660.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 60720 61088 . + . ID=gene-AB25_RS11890;Name=yfeK;gbkey=Gene;gene=yfeK;gene_biotype=protein_coding;locus_tag=AB25_RS11890;old_locus_tag=AB25_2770 NZ_JJMC01000045.1 Protein Homology CDS 60720 61088 . + 0 ID=cds-WP_000719943.1;Parent=gene-AB25_RS11890;Dbxref=GenBank:WP_000719943.1;Name=WP_000719943.1;gbkey=CDS;gene=yfeK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001592994.1;locus_tag=AB25_RS11890;product=YfeK family protein;protein_id=WP_000719943.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 61091 62002 . - . ID=gene-AB25_RS11885;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=AB25_RS11885;old_locus_tag=AB25_2771 NZ_JJMC01000045.1 Protein Homology CDS 61091 62002 . - 0 ID=cds-WP_001297645.1;Parent=gene-AB25_RS11885;Dbxref=GenBank:WP_001297645.1;Name=WP_001297645.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416916.1;locus_tag=AB25_RS11885;product=cysteine synthase B;protein_id=WP_001297645.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 62136 63233 . - . ID=gene-AB25_RS11880;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=AB25_RS11880;old_locus_tag=AB25_2772 NZ_JJMC01000045.1 Protein Homology CDS 62136 63233 . - 0 ID=cds-WP_000021017.1;Parent=gene-AB25_RS11880;Dbxref=GenBank:WP_000021017.1;Name=WP_000021017.1;Ontology_term=GO:1902358,GO:0005524,GO:0015419,GO:0016020,GO:0043190;gbkey=CDS;gene=cysA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416917.1;locus_tag=AB25_RS11880;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;protein_id=WP_000021017.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 63223 64098 . - . ID=gene-AB25_RS11875;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=AB25_RS11875;old_locus_tag=AB25_2773 NZ_JJMC01000045.1 Protein Homology CDS 63223 64098 . - 0 ID=cds-WP_000852686.1;Parent=gene-AB25_RS11875;Dbxref=GenBank:WP_000852686.1;Name=WP_000852686.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysW;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026168.2;locus_tag=AB25_RS11875;product=sulfate/thiosulfate ABC transporter permease CysW;protein_id=WP_000852686.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 64098 64931 . - . ID=gene-AB25_RS11870;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=AB25_RS11870;old_locus_tag=AB25_2774 NZ_JJMC01000045.1 Protein Homology CDS 64098 64931 . - 0 ID=cds-WP_000458405.1;Parent=gene-AB25_RS11870;Dbxref=GenBank:WP_000458405.1;Name=WP_000458405.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysT;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458418.1;locus_tag=AB25_RS11870;product=sulfate/thiosulfate ABC transporter permease CysT;protein_id=WP_000458405.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 64931 65947 . - . ID=gene-AB25_RS11865;Name=cysP;gbkey=Gene;gene=cysP;gene_biotype=protein_coding;locus_tag=AB25_RS11865;old_locus_tag=AB25_2775 NZ_JJMC01000045.1 Protein Homology CDS 64931 65947 . - 0 ID=cds-WP_000290223.1;Parent=gene-AB25_RS11865;Dbxref=GenBank:WP_000290223.1;Name=WP_000290223.1;gbkey=CDS;gene=cysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311323.1;locus_tag=AB25_RS11865;product=thiosulfate/sulfate ABC transporter substrate-binding protein CysP;protein_id=WP_000290223.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 66118 66909 . - . ID=gene-AB25_RS11860;Name=ucpA;gbkey=Gene;gene=ucpA;gene_biotype=protein_coding;locus_tag=AB25_RS11860;old_locus_tag=AB25_2776 NZ_JJMC01000045.1 Protein Homology CDS 66118 66909 . - 0 ID=cds-WP_032171028.1;Parent=gene-AB25_RS11860;Dbxref=GenBank:WP_032171028.1;Name=WP_032171028.1;gbkey=CDS;gene=ucpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416921.4;locus_tag=AB25_RS11860;product=SDR family oxidoreductase UcpA;protein_id=WP_032171028.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 67038 67895 . - . ID=gene-AB25_RS11855;Name=murR;gbkey=Gene;gene=murR;gene_biotype=protein_coding;locus_tag=AB25_RS11855;old_locus_tag=AB25_2777 NZ_JJMC01000045.1 Protein Homology CDS 67038 67895 . - 0 ID=cds-WP_000966468.1;Parent=gene-AB25_RS11855;Dbxref=GenBank:WP_000966468.1;Name=WP_000966468.1;gbkey=CDS;gene=murR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416922.1;locus_tag=AB25_RS11855;product=HTH-type transcriptional regulator MurR;protein_id=WP_000966468.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 68059 68955 . + . ID=gene-AB25_RS11850;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=AB25_RS11850;old_locus_tag=AB25_2778 NZ_JJMC01000045.1 Protein Homology CDS 68059 68955 . + 0 ID=cds-WP_001175648.1;Parent=gene-AB25_RS11850;Dbxref=GenBank:WP_001175648.1;Name=WP_001175648.1;Ontology_term=GO:0009254,GO:0046348,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=peptidoglycan turnover|0009254||IEA,amino sugar catabolic process|0046348||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416923.1;locus_tag=AB25_RS11850;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_001175648.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 68959 70383 . + . ID=gene-AB25_RS11845;Name=murP;gbkey=Gene;gene=murP;gene_biotype=protein_coding;locus_tag=AB25_RS11845;old_locus_tag=AB25_2779 NZ_JJMC01000045.1 Protein Homology CDS 68959 70383 . + 0 ID=cds-WP_001040482.1;Parent=gene-AB25_RS11845;Dbxref=GenBank:WP_001040482.1;Name=WP_001040482.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=murP;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416924.1;locus_tag=AB25_RS11845;product=PTS N-acetylmuramic acid transporter subunit IIBC;protein_id=WP_001040482.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 70388 71692 . + . ID=gene-AB25_RS11840;Name=pbp4b;gbkey=Gene;gene=pbp4b;gene_biotype=protein_coding;locus_tag=AB25_RS11840;old_locus_tag=AB25_2780 NZ_JJMC01000045.1 Protein Homology CDS 70388 71692 . + 0 ID=cds-WP_001315775.1;Parent=gene-AB25_RS11840;Dbxref=GenBank:WP_001315775.1;Name=WP_001315775.1;gbkey=CDS;gene=pbp4b;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311328.1;locus_tag=AB25_RS11840;product=penicillin binding protein PBP4B;protein_id=WP_001315775.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 71750 72649 . - . ID=gene-AB25_RS11835;Name=yfeX;gbkey=Gene;gene=yfeX;gene_biotype=protein_coding;locus_tag=AB25_RS11835;old_locus_tag=AB25_2781 NZ_JJMC01000045.1 Protein Homology CDS 71750 72649 . - 0 ID=cds-WP_000084590.1;Parent=gene-AB25_RS11835;Dbxref=GenBank:WP_000084590.1;Name=WP_000084590.1;gbkey=CDS;gene=yfeX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311329.2;locus_tag=AB25_RS11835;product=porphyrinogen peroxidase;protein_id=WP_000084590.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 72745 73320 . - . ID=gene-AB25_RS11830;Name=yfeY;gbkey=Gene;gene=yfeY;gene_biotype=protein_coding;locus_tag=AB25_RS11830;old_locus_tag=AB25_2782 NZ_JJMC01000045.1 Protein Homology CDS 72745 73320 . - 0 ID=cds-WP_000838945.1;Parent=gene-AB25_RS11830;Dbxref=GenBank:WP_000838945.1;Name=WP_000838945.1;gbkey=CDS;gene=yfeY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311330.1;locus_tag=AB25_RS11830;product=RpoE-regulated lipoprotein;protein_id=WP_000838945.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 73381 73830 . - . ID=gene-AB25_RS0125690;Name=yfeZ;gbkey=Gene;gene=yfeZ;gene_biotype=protein_coding;locus_tag=AB25_RS0125690;old_locus_tag=AB25_2783 NZ_JJMC01000045.1 Protein Homology CDS 73381 73830 . - 0 ID=cds-WP_000842944.1;Parent=gene-AB25_RS0125690;Dbxref=GenBank:WP_000842944.1;Name=WP_000842944.1;gbkey=CDS;gene=yfeZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311331.2;locus_tag=AB25_RS0125690;product=DUF2919 domain-containing protein;protein_id=WP_000842944.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 73817 74242 . - . ID=gene-AB25_RS11825;Name=ypeA;gbkey=Gene;gene=ypeA;gene_biotype=protein_coding;locus_tag=AB25_RS11825;old_locus_tag=AB25_2784 NZ_JJMC01000045.1 Protein Homology CDS 73817 74242 . - 0 ID=cds-WP_000406000.1;Parent=gene-AB25_RS11825;Dbxref=GenBank:WP_000406000.1;Name=WP_000406000.1;Ontology_term=GO:0008080;gbkey=CDS;gene=ypeA;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311332.2;locus_tag=AB25_RS11825;product=GNAT family acetyltransferase;protein_id=WP_000406000.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 74456 75325 . + . ID=gene-AB25_RS11820;Name=amiA;gbkey=Gene;gene=amiA;gene_biotype=protein_coding;locus_tag=AB25_RS11820;old_locus_tag=AB25_2785 NZ_JJMC01000045.1 Protein Homology CDS 74456 75325 . + 0 ID=cds-WP_000102891.1;Parent=gene-AB25_RS11820;Dbxref=GenBank:WP_000102891.1;Name=WP_000102891.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiA;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311333.1;locus_tag=AB25_RS11820;product=N-acetylmuramoyl-L-alanine amidase AmiA;protein_id=WP_000102891.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 75329 76228 . + . ID=gene-AB25_RS11815;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=AB25_RS11815;old_locus_tag=AB25_2786 NZ_JJMC01000045.1 Protein Homology CDS 75329 76228 . + 0 ID=cds-WP_000801367.1;Parent=gene-AB25_RS11815;Dbxref=GenBank:WP_000801367.1;Name=WP_000801367.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311334.1;locus_tag=AB25_RS11815;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_000801367.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 76234 77286 . - . ID=gene-AB25_RS11810;Name=eutR;gbkey=Gene;gene=eutR;gene_biotype=protein_coding;locus_tag=AB25_RS11810;old_locus_tag=AB25_2787 NZ_JJMC01000045.1 Protein Homology CDS 76234 77286 . - 0 ID=cds-WP_000753700.1;Parent=gene-AB25_RS11810;Dbxref=GenBank:WP_000753700.1;Name=WP_000753700.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=eutR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311335.1;locus_tag=AB25_RS11810;product=HTH-type transcriptional regulator EutR;protein_id=WP_000753700.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 77332 77832 . - . ID=gene-AB25_RS11805;Name=eutK;gbkey=Gene;gene=eutK;gene_biotype=protein_coding;locus_tag=AB25_RS11805;old_locus_tag=AB25_2788 NZ_JJMC01000045.1 Protein Homology CDS 77332 77832 . - 0 ID=cds-WP_000606257.1;Parent=gene-AB25_RS11805;Dbxref=GenBank:WP_000606257.1;Name=WP_000606257.1;gbkey=CDS;gene=eutK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416933.4;locus_tag=AB25_RS11805;product=ethanolamine utilization microcompartment protein EutK;protein_id=WP_000606257.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 77845 78504 . - . ID=gene-AB25_RS11800;Name=eutL;gbkey=Gene;gene=eutL;gene_biotype=protein_coding;locus_tag=AB25_RS11800;old_locus_tag=AB25_2789 NZ_JJMC01000045.1 Protein Homology CDS 77845 78504 . - 0 ID=cds-WP_001111038.1;Parent=gene-AB25_RS11800;Dbxref=GenBank:WP_001111038.1;Name=WP_001111038.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=eutL;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708289.1;locus_tag=AB25_RS11800;product=ethanolamine utilization microcompartment protein EutL;protein_id=WP_001111038.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 78514 79401 . - . ID=gene-AB25_RS11795;Name=eutC;gbkey=Gene;gene=eutC;gene_biotype=protein_coding;locus_tag=AB25_RS11795;old_locus_tag=AB25_2790 NZ_JJMC01000045.1 Protein Homology CDS 78514 79401 . - 0 ID=cds-WP_000372364.1;Parent=gene-AB25_RS11795;Dbxref=GenBank:WP_000372364.1;Name=WP_000372364.1;gbkey=CDS;gene=eutC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416935.1;locus_tag=AB25_RS11795;product=ethanolamine ammonia-lyase subunit beta;protein_id=WP_000372364.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 79422 80783 . - . ID=gene-AB25_RS11790;Name=eutB;gbkey=Gene;gene=eutB;gene_biotype=protein_coding;locus_tag=AB25_RS11790;old_locus_tag=AB25_2791 NZ_JJMC01000045.1 Protein Homology CDS 79422 80783 . - 0 ID=cds-WP_000770004.1;Parent=gene-AB25_RS11790;Dbxref=GenBank:WP_000770004.1;Name=WP_000770004.1;gbkey=CDS;gene=eutB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311339.1;locus_tag=AB25_RS11790;product=ethanolamine ammonia-lyase subunit alpha;protein_id=WP_000770004.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 80795 82198 . - . ID=gene-AB25_RS11785;Name=eutA;gbkey=Gene;gene=eutA;gene_biotype=protein_coding;locus_tag=AB25_RS11785;old_locus_tag=AB25_2792 NZ_JJMC01000045.1 Protein Homology CDS 80795 82198 . - 0 ID=cds-WP_001097452.1;Parent=gene-AB25_RS11785;Dbxref=GenBank:WP_001097452.1;Name=WP_001097452.1;gbkey=CDS;gene=eutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311340.1;locus_tag=AB25_RS11785;product=ethanolamine ammonia-lyase reactivating factor EutA;protein_id=WP_001097452.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 82195 83421 . - . ID=gene-AB25_RS11780;Name=eutH;gbkey=Gene;gene=eutH;gene_biotype=protein_coding;locus_tag=AB25_RS11780;old_locus_tag=AB25_2793 NZ_JJMC01000045.1 Protein Homology CDS 82195 83421 . - 0 ID=cds-WP_000512372.1;Parent=gene-AB25_RS11780;Dbxref=GenBank:WP_000512372.1;Name=WP_000512372.1;Ontology_term=GO:0034229,GO:0034228,GO:0016020;gbkey=CDS;gene=eutH;go_component=membrane|0016020||IEA;go_function=ethanolamine transmembrane transporter activity|0034228||IEA;go_process=ethanolamine transport|0034229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416947.1;locus_tag=AB25_RS11780;product=ethanolamine utilization protein EutH;protein_id=WP_000512372.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 83538 84725 . - . ID=gene-AB25_RS11775;Name=eutG;gbkey=Gene;gene=eutG;gene_biotype=protein_coding;locus_tag=AB25_RS11775;old_locus_tag=AB25_2794 NZ_JJMC01000045.1 Protein Homology CDS 83538 84725 . - 0 ID=cds-WP_001356213.1;Parent=gene-AB25_RS11775;Dbxref=GenBank:WP_001356213.1;Name=WP_001356213.1;Ontology_term=GO:0016491;gbkey=CDS;gene=eutG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311342.2;locus_tag=AB25_RS11775;product=ethanolamine utilization ethanol dehydrogenase EutG;protein_id=WP_001356213.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 84715 85551 . - . ID=gene-AB25_RS11770;Name=eutJ;gbkey=Gene;gene=eutJ;gene_biotype=protein_coding;locus_tag=AB25_RS11770;old_locus_tag=AB25_2795 NZ_JJMC01000045.1 Protein Homology CDS 84715 85551 . - 0 ID=cds-WP_000929709.1;Parent=gene-AB25_RS11770;Dbxref=GenBank:WP_000929709.1;Name=WP_000929709.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=eutJ;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416949.1;locus_tag=AB25_RS11770;product=ethanolamine utilization protein EutJ;protein_id=WP_000929709.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 85562 86965 . - . ID=gene-AB25_RS11765;Name=eutE;gbkey=Gene;gene=eutE;gene_biotype=protein_coding;locus_tag=AB25_RS11765;old_locus_tag=AB25_2796 NZ_JJMC01000045.1 Protein Homology CDS 85562 86965 . - 0 ID=cds-WP_001075711.1;Parent=gene-AB25_RS11765;Dbxref=GenBank:WP_001075711.1;Name=WP_001075711.1;Ontology_term=GO:0004029,GO:0008774;gbkey=CDS;gene=eutE;go_function=aldehyde dehydrogenase (NAD+) activity|0004029||IEA,acetaldehyde dehydrogenase (acetylating) activity|0008774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416950.1;locus_tag=AB25_RS11765;product=aldehyde dehydrogenase family protein;protein_id=WP_001075711.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 86977 87264 . - . ID=gene-AB25_RS11760;Name=eutN;gbkey=Gene;gene=eutN;gene_biotype=protein_coding;locus_tag=AB25_RS11760;old_locus_tag=AB25_2797 NZ_JJMC01000045.1 Protein Homology CDS 86977 87264 . - 0 ID=cds-WP_000762196.1;Parent=gene-AB25_RS11760;Dbxref=GenBank:WP_000762196.1;Name=WP_000762196.1;gbkey=CDS;gene=eutN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416951.1;locus_tag=AB25_RS11760;product=ethanolamine utilization microcompartment protein EutN;protein_id=WP_000762196.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 87371 87664 . - . ID=gene-AB25_RS11755;Name=eutM;gbkey=Gene;gene=eutM;gene_biotype=protein_coding;locus_tag=AB25_RS11755;old_locus_tag=AB25_2798 NZ_JJMC01000045.1 Protein Homology CDS 87371 87664 . - 0 ID=cds-WP_000387713.1;Parent=gene-AB25_RS11755;Dbxref=GenBank:WP_000387713.1;Name=WP_000387713.1;gbkey=CDS;gene=eutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416952.2;locus_tag=AB25_RS11755;product=ethanolamine utilization microcompartment protein EutM;protein_id=WP_000387713.1;transl_table=11 NZ_JJMC01000045.1 RefSeq pseudogene 87703 88719 . - . ID=gene-AB25_RS11750;Name=pta;gbkey=Gene;gene=pta;gene_biotype=pseudogene;locus_tag=AB25_RS11750;old_locus_tag=AB25_2799;pseudo=true NZ_JJMC01000045.1 Protein Homology CDS 87703 88719 . - 0 ID=cds-AB25_RS11750;Parent=gene-AB25_RS11750;Note=internal stop;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416953.1;locus_tag=AB25_RS11750;product=phosphate acetyltransferase;pseudo=true;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 88716 89519 . - . ID=gene-AB25_RS11740;Name=eutT;gbkey=Gene;gene=eutT;gene_biotype=protein_coding;locus_tag=AB25_RS11740;old_locus_tag=AB25_2801 NZ_JJMC01000045.1 Protein Homology CDS 88716 89519 . - 0 ID=cds-WP_000651298.1;Parent=gene-AB25_RS11740;Dbxref=GenBank:WP_000651298.1;Name=WP_000651298.1;Ontology_term=GO:0006580,GO:0008817;gbkey=CDS;gene=eutT;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=ethanolamine metabolic process|0006580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416954.1;locus_tag=AB25_RS11740;product=ethanolamine utilization cob(I)yrinic acid a%2Cc-diamide adenosyltransferase EutT;protein_id=WP_000651298.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 89516 90217 . - . ID=gene-AB25_RS11735;Name=eutQ;gbkey=Gene;gene=eutQ;gene_biotype=protein_coding;locus_tag=AB25_RS11735;old_locus_tag=AB25_2802 NZ_JJMC01000045.1 Protein Homology CDS 89516 90217 . - 0 ID=cds-WP_032171035.1;Parent=gene-AB25_RS11735;Dbxref=GenBank:WP_032171035.1;Name=WP_032171035.1;gbkey=CDS;gene=eutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416955.1;locus_tag=AB25_RS11735;product=ethanolamine utilization acetate kinase EutQ;protein_id=WP_032171035.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 90192 90671 . - . ID=gene-AB25_RS11730;Name=eutP;gbkey=Gene;gene=eutP;gene_biotype=protein_coding;locus_tag=AB25_RS11730;old_locus_tag=AB25_2803 NZ_JJMC01000045.1 Protein Homology CDS 90192 90671 . - 0 ID=cds-WP_000820764.1;Parent=gene-AB25_RS11730;Dbxref=GenBank:WP_000820764.1;Name=WP_000820764.1;gbkey=CDS;gene=eutP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311350.1;locus_tag=AB25_RS11730;product=ethanolamine utilization acetate kinase EutP;protein_id=WP_000820764.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 90684 91019 . - . ID=gene-AB25_RS11725;Name=eutS;gbkey=Gene;gene=eutS;gene_biotype=protein_coding;locus_tag=AB25_RS11725;old_locus_tag=AB25_2804 NZ_JJMC01000045.1 Protein Homology CDS 90684 91019 . - 0 ID=cds-WP_000356956.1;Parent=gene-AB25_RS11725;Dbxref=GenBank:WP_000356956.1;Name=WP_000356956.1;gbkey=CDS;gene=eutS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311351.2;locus_tag=AB25_RS11725;product=ethanolamine utilization microcompartment protein EutS;protein_id=WP_000356956.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 91312 93591 . - . ID=gene-AB25_RS11720;Name=maeB;gbkey=Gene;gene=maeB;gene_biotype=protein_coding;locus_tag=AB25_RS11720;old_locus_tag=AB25_2805 NZ_JJMC01000045.1 Protein Homology CDS 91312 93591 . - 0 ID=cds-WP_000342642.1;Parent=gene-AB25_RS11720;Dbxref=GenBank:WP_000342642.1;Name=WP_000342642.1;gbkey=CDS;gene=maeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708302.1;locus_tag=AB25_RS11720;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;protein_id=WP_000342642.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 93880 94830 . + . ID=gene-AB25_RS11715;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=AB25_RS11715;old_locus_tag=AB25_2806 NZ_JJMC01000045.1 Protein Homology CDS 93880 94830 . + 0 ID=cds-WP_001003709.1;Parent=gene-AB25_RS11715;Dbxref=GenBank:WP_001003709.1;Name=WP_001003709.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311353.1;locus_tag=AB25_RS11715;product=transaldolase;protein_id=WP_001003709.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 94850 96853 . + . ID=gene-AB25_RS11710;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=AB25_RS11710;old_locus_tag=AB25_2807 NZ_JJMC01000045.1 Protein Homology CDS 94850 96853 . + 0 ID=cds-WP_000087298.1;Parent=gene-AB25_RS11710;Dbxref=GenBank:WP_000087298.1;Name=WP_000087298.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311354.1;locus_tag=AB25_RS11710;product=transketolase;protein_id=WP_000087298.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 96949 97992 . - . ID=gene-AB25_RS11705;Name=ypfG;gbkey=Gene;gene=ypfG;gene_biotype=protein_coding;locus_tag=AB25_RS11705;old_locus_tag=AB25_2808 NZ_JJMC01000045.1 Protein Homology CDS 96949 97992 . - 0 ID=cds-WP_001270524.1;Parent=gene-AB25_RS11705;Dbxref=GenBank:WP_001270524.1;Name=WP_001270524.1;gbkey=CDS;gene=ypfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311355.1;locus_tag=AB25_RS11705;product=DUF1176 domain-containing protein;protein_id=WP_001270524.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 98118 98693 . - . ID=gene-AB25_RS11700;Name=nudK;gbkey=Gene;gene=nudK;gene_biotype=protein_coding;locus_tag=AB25_RS11700;old_locus_tag=AB25_2809 NZ_JJMC01000045.1 Protein Homology CDS 98118 98693 . - 0 ID=cds-WP_000193711.1;Parent=gene-AB25_RS11700;Dbxref=GenBank:WP_000193711.1;Name=WP_000193711.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;gene=nudK;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311356.1;locus_tag=AB25_RS11700;product=GDP-mannose pyrophosphatase NudK;protein_id=WP_000193711.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 98761 100740 . - . ID=gene-AB25_RS11695;Name=aegA;gbkey=Gene;gene=aegA;gene_biotype=protein_coding;locus_tag=AB25_RS11695;old_locus_tag=AB25_2810 NZ_JJMC01000045.1 Protein Homology CDS 98761 100740 . - 0 ID=cds-WP_001078870.1;Parent=gene-AB25_RS11695;Dbxref=GenBank:WP_001078870.1;Name=WP_001078870.1;Ontology_term=GO:0016491;gbkey=CDS;gene=aegA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416963.1;locus_tag=AB25_RS11695;product=formate-dependent uric acid utilization protein AegA;protein_id=WP_001078870.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 100946 102646 . + . ID=gene-AB25_RS11690;Name=narQ;gbkey=Gene;gene=narQ;gene_biotype=protein_coding;locus_tag=AB25_RS11690;old_locus_tag=AB25_2811 NZ_JJMC01000045.1 Protein Homology CDS 100946 102646 . + 0 ID=cds-WP_000636129.1;Parent=gene-AB25_RS11690;Dbxref=GenBank:WP_000636129.1;Name=WP_000636129.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narQ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416964.1;locus_tag=AB25_RS11690;product=nitrate/nitrite two-component system sensor histidine kinase NarQ;protein_id=WP_000636129.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 102810 105923 . + . ID=gene-AB25_RS11685;Name=acrD;gbkey=Gene;gene=acrD;gene_biotype=protein_coding;locus_tag=AB25_RS11685;old_locus_tag=AB25_2812 NZ_JJMC01000045.1 Protein Homology CDS 102810 105923 . + 0 ID=cds-WP_032171038.1;Parent=gene-AB25_RS11685;Dbxref=GenBank:WP_032171038.1;Name=WP_032171038.1;Ontology_term=GO:0042908,GO:0015562;gbkey=CDS;gene=acrD;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416965.1;locus_tag=AB25_RS11685;product=multidrug efflux RND transporter permease AcrD;protein_id=WP_032171038.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 106022 106081 . - . ID=gene-AB25_RS30450;Name=ypfM;gbkey=Gene;gene=ypfM;gene_biotype=protein_coding;locus_tag=AB25_RS30450 NZ_JJMC01000045.1 Protein Homology CDS 106022 106081 . - 0 ID=cds-WP_001386977.1;Parent=gene-AB25_RS30450;Dbxref=GenBank:WP_001386977.1;Name=WP_001386977.1;gbkey=CDS;gene=ypfM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165325.1;locus_tag=AB25_RS30450;product=protein YpfM;protein_id=WP_001386977.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 106462 106818 . + . ID=gene-AB25_RS11680;Name=yffB;gbkey=Gene;gene=yffB;gene_biotype=protein_coding;locus_tag=AB25_RS11680;old_locus_tag=AB25_2813 NZ_JJMC01000045.1 Protein Homology CDS 106462 106818 . + 0 ID=cds-WP_000258247.1;Parent=gene-AB25_RS11680;Dbxref=GenBank:WP_000258247.1;Name=WP_000258247.1;gbkey=CDS;gene=yffB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708309.1;locus_tag=AB25_RS11680;product=ArsC family reductase;protein_id=WP_000258247.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 106822 107949 . + . ID=gene-AB25_RS11675;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=AB25_RS11675;old_locus_tag=AB25_2814 NZ_JJMC01000045.1 Protein Homology CDS 106822 107949 . + 0 ID=cds-WP_001277801.1;Parent=gene-AB25_RS11675;Dbxref=GenBank:WP_001277801.1;Name=WP_001277801.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078199.1;locus_tag=AB25_RS11675;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_001277801.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 107977 108177 . + . ID=gene-AB25_RS11670;Name=ypfN;gbkey=Gene;gene=ypfN;gene_biotype=protein_coding;locus_tag=AB25_RS11670;old_locus_tag=AB25_2815 NZ_JJMC01000045.1 Protein Homology CDS 107977 108177 . + 0 ID=cds-WP_000383836.1;Parent=gene-AB25_RS11670;Dbxref=GenBank:WP_000383836.1;Name=WP_000383836.1;gbkey=CDS;gene=ypfN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588465.1;locus_tag=AB25_RS11670;product=YpfN family protein;protein_id=WP_000383836.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 108287 108985 . - . ID=gene-AB25_RS11665;Name=ypfH;gbkey=Gene;gene=ypfH;gene_biotype=protein_coding;locus_tag=AB25_RS11665;old_locus_tag=AB25_2816 NZ_JJMC01000045.1 Protein Homology CDS 108287 108985 . - 0 ID=cds-WP_000679823.1;Parent=gene-AB25_RS11665;Dbxref=GenBank:WP_000679823.1;Name=WP_000679823.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ypfH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416968.2;locus_tag=AB25_RS11665;product=esterase;protein_id=WP_000679823.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 109059 111074 . - . ID=gene-AB25_RS11660;Name=tmcA;gbkey=Gene;gene=tmcA;gene_biotype=protein_coding;locus_tag=AB25_RS11660;old_locus_tag=AB25_2817 NZ_JJMC01000045.1 Protein Homology CDS 109059 111074 . - 0 ID=cds-WP_000829323.1;Parent=gene-AB25_RS11660;Dbxref=GenBank:WP_000829323.1;Name=WP_000829323.1;gbkey=CDS;gene=tmcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311363.1;locus_tag=AB25_RS11660;product=tRNA cytosine(34) acetyltransferase TmcA;protein_id=WP_000829323.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 111089 111952 . - . ID=gene-AB25_RS11655;Name=ypfJ;gbkey=Gene;gene=ypfJ;gene_biotype=protein_coding;locus_tag=AB25_RS11655;old_locus_tag=AB25_2818 NZ_JJMC01000045.1 Protein Homology CDS 111089 111952 . - 0 ID=cds-WP_001267507.1;Parent=gene-AB25_RS11655;Dbxref=GenBank:WP_001267507.1;Name=WP_001267507.1;gbkey=CDS;gene=ypfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311364.1;locus_tag=AB25_RS11655;product=KPN_02809 family neutral zinc metallopeptidase;protein_id=WP_001267507.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 112099 112497 . - . ID=gene-AB25_RS11650;Name=vapC;gbkey=Gene;gene=vapC;gene_biotype=protein_coding;locus_tag=AB25_RS11650;old_locus_tag=AB25_2819 NZ_JJMC01000045.1 Protein Homology CDS 112099 112497 . - 0 ID=cds-WP_000911330.1;Parent=gene-AB25_RS11650;Dbxref=GenBank:WP_000911330.1;Name=WP_000911330.1;Ontology_term=GO:0000287,GO:0004540;gbkey=CDS;gene=vapC;go_function=magnesium ion binding|0000287||IEA,RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490590.1;locus_tag=AB25_RS11650;product=type II toxin-antitoxin system tRNA(fMet)-specific endonuclease VapC;protein_id=WP_000911330.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 112497 112724 . - . ID=gene-AB25_RS11645;Name=vapB;gbkey=Gene;gene=vapB;gene_biotype=protein_coding;locus_tag=AB25_RS11645;old_locus_tag=AB25_2820 NZ_JJMC01000045.1 Protein Homology CDS 112497 112724 . - 0 ID=cds-WP_001464564.1;Parent=gene-AB25_RS11645;Dbxref=GenBank:WP_001464564.1;Name=WP_001464564.1;gbkey=CDS;gene=vapB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858379.1;locus_tag=AB25_RS11645;product=toxin-antitoxin system antitoxin VapB;protein_id=WP_001464564.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 112878 113591 . - . ID=gene-AB25_RS11640;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=AB25_RS11640;old_locus_tag=AB25_2821 NZ_JJMC01000045.1 Protein Homology CDS 112878 113591 . - 0 ID=cds-WP_001295467.1;Parent=gene-AB25_RS11640;Dbxref=GenBank:WP_001295467.1;Name=WP_001295467.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458944.1;locus_tag=AB25_RS11640;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_001295467.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 113804 114838 . - . ID=gene-AB25_RS11635;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=AB25_RS11635;old_locus_tag=AB25_2822 NZ_JJMC01000045.1 Protein Homology CDS 113804 114838 . - 0 ID=cds-WP_001297320.1;Parent=gene-AB25_RS11635;Dbxref=GenBank:WP_001297320.1;Name=WP_001297320.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708316.2;locus_tag=AB25_RS11635;product=outer membrane protein assembly factor BamC;protein_id=WP_001297320.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 114855 115733 . - . ID=gene-AB25_RS11630;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=AB25_RS11630;old_locus_tag=AB25_2823 NZ_JJMC01000045.1 Protein Homology CDS 114855 115733 . - 0 ID=cds-WP_001295469.1;Parent=gene-AB25_RS11630;Dbxref=GenBank:WP_001295469.1;Name=WP_001295469.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311023.1;locus_tag=AB25_RS11630;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_001295469.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 115879 116451 . + . ID=gene-AB25_RS11625;Name=gcvR;gbkey=Gene;gene=gcvR;gene_biotype=protein_coding;locus_tag=AB25_RS11625;old_locus_tag=AB25_2824 NZ_JJMC01000045.1 Protein Homology CDS 115879 116451 . + 0 ID=cds-WP_000176187.1;Parent=gene-AB25_RS11625;Dbxref=GenBank:WP_000176187.1;Name=WP_000176187.1;gbkey=CDS;gene=gcvR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708318.1;locus_tag=AB25_RS11625;product=glycine cleavage system transcriptional repressor;protein_id=WP_000176187.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 116451 116921 . + . ID=gene-AB25_RS11620;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=AB25_RS11620;old_locus_tag=AB25_2825 NZ_JJMC01000045.1 Protein Homology CDS 116451 116921 . + 0 ID=cds-WP_001068682.1;Parent=gene-AB25_RS11620;Dbxref=GenBank:WP_001068682.1;Name=WP_001068682.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311369.1;locus_tag=AB25_RS11620;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_001068682.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 117174 117791 . + . ID=gene-AB25_RS11615;Name=hyfA;gbkey=Gene;gene=hyfA;gene_biotype=protein_coding;locus_tag=AB25_RS11615;old_locus_tag=AB25_2826 NZ_JJMC01000045.1 Protein Homology CDS 117174 117791 . + 0 ID=cds-WP_032173510.1;Parent=gene-AB25_RS11615;Dbxref=GenBank:WP_032173510.1;Name=WP_032173510.1;gbkey=CDS;gene=hyfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311370.2;locus_tag=AB25_RS11615;product=hydrogenase 4 subunit HyfA;protein_id=WP_032173510.1;transl_table=11 NZ_JJMC01000045.1 RefSeq pseudogene 117791 119808 . + . ID=gene-AB25_RS11605;Name=hyfB;gbkey=Gene;gene=hyfB;gene_biotype=pseudogene;locus_tag=AB25_RS11605;old_locus_tag=AB25_2828;pseudo=true NZ_JJMC01000045.1 Protein Homology CDS 117791 119808 . + 0 ID=cds-AB25_RS11605;Parent=gene-AB25_RS11605;Note=frameshifted;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=hyfB;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311371.1;locus_tag=AB25_RS11605;product=hydrogenase 4 subunit B;pseudo=true;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 119819 120766 . + . ID=gene-AB25_RS11600;Name=hyfC;gbkey=Gene;gene=hyfC;gene_biotype=protein_coding;locus_tag=AB25_RS11600;old_locus_tag=AB25_2829 NZ_JJMC01000045.1 Protein Homology CDS 119819 120766 . + 0 ID=cds-WP_001311024.1;Parent=gene-AB25_RS11600;Dbxref=GenBank:WP_001311024.1;Name=WP_001311024.1;gbkey=CDS;gene=hyfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416978.4;locus_tag=AB25_RS11600;product=hydrogenase 4 subunit HyfC;protein_id=WP_001311024.1;transl_table=11 NZ_JJMC01000045.1 RefSeq pseudogene 120783 122014 . + . ID=gene-AB25_RS11595;Name=AB25_RS11595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS11595;old_locus_tag=AB25_2830;pseudo=true NZ_JJMC01000045.1 Protein Homology CDS 120783 122014 . + 0 ID=cds-AB25_RS11595;Parent=gene-AB25_RS11595;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416979.1;locus_tag=AB25_RS11595;product=hydrogenase 4 subunit D;pseudo=true;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 122026 122676 . + . ID=gene-AB25_RS11585;Name=hyfE;gbkey=Gene;gene=hyfE;gene_biotype=protein_coding;locus_tag=AB25_RS11585;old_locus_tag=AB25_2832 NZ_JJMC01000045.1 Protein Homology CDS 122026 122676 . + 0 ID=cds-WP_000147985.1;Parent=gene-AB25_RS11585;Dbxref=GenBank:WP_000147985.1;Name=WP_000147985.1;gbkey=CDS;gene=hyfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311374.1;locus_tag=AB25_RS11585;product=hydrogenase 4 membrane subunit;protein_id=WP_000147985.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 122681 124261 . + . ID=gene-AB25_RS11580;Name=hyfF;gbkey=Gene;gene=hyfF;gene_biotype=protein_coding;locus_tag=AB25_RS11580;old_locus_tag=AB25_2833 NZ_JJMC01000045.1 Protein Homology CDS 122681 124261 . + 0 ID=cds-WP_001740575.1;Parent=gene-AB25_RS11580;Dbxref=GenBank:WP_001740575.1;Name=WP_001740575.1;gbkey=CDS;gene=hyfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708324.1;locus_tag=AB25_RS11580;product=hydrogenase 4 subunit F;protein_id=WP_001740575.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 124251 125918 . + . ID=gene-AB25_RS11575;Name=hyfG;gbkey=Gene;gene=hyfG;gene_biotype=protein_coding;locus_tag=AB25_RS11575;old_locus_tag=AB25_2834 NZ_JJMC01000045.1 Protein Homology CDS 124251 125918 . + 0 ID=cds-WP_001102276.1;Parent=gene-AB25_RS11575;Dbxref=GenBank:WP_001102276.1;Name=WP_001102276.1;gbkey=CDS;gene=hyfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416982.1;locus_tag=AB25_RS11575;product=hydrogenase 4 catalytic subunit HyfG;protein_id=WP_001102276.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 125928 126473 . + . ID=gene-AB25_RS11570;Name=hyfH;gbkey=Gene;gene=hyfH;gene_biotype=protein_coding;locus_tag=AB25_RS11570;old_locus_tag=AB25_2835 NZ_JJMC01000045.1 Protein Homology CDS 125928 126473 . + 0 ID=cds-WP_000916058.1;Parent=gene-AB25_RS11570;Dbxref=GenBank:WP_000916058.1;Name=WP_000916058.1;gbkey=CDS;gene=hyfH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311377.1;locus_tag=AB25_RS11570;product=hydrogenase 4 subunit H;protein_id=WP_000916058.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 126470 127228 . + . ID=gene-AB25_RS11565;Name=hyfI;gbkey=Gene;gene=hyfI;gene_biotype=protein_coding;locus_tag=AB25_RS11565;old_locus_tag=AB25_2836 NZ_JJMC01000045.1 Protein Homology CDS 126470 127228 . + 0 ID=cds-WP_000075570.1;Parent=gene-AB25_RS11565;Dbxref=GenBank:WP_000075570.1;Name=WP_000075570.1;gbkey=CDS;gene=hyfI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000075566.1;locus_tag=AB25_RS11565;product=hydrogenase 4 catalytic subunit HyfI;protein_id=WP_000075570.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 127221 127634 . + . ID=gene-AB25_RS11560;Name=hyfJ;gbkey=Gene;gene=hyfJ;gene_biotype=protein_coding;locus_tag=AB25_RS11560;old_locus_tag=AB25_2837 NZ_JJMC01000045.1 Protein Homology CDS 127221 127634 . + 0 ID=cds-WP_000796789.1;Parent=gene-AB25_RS11560;Dbxref=GenBank:WP_000796789.1;Name=WP_000796789.1;gbkey=CDS;gene=hyfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416985.4;locus_tag=AB25_RS11560;product=hydrogenase 4 assembly chaperone HyfJ;protein_id=WP_000796789.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 127664 129676 . + . ID=gene-AB25_RS11555;Name=hyfR;gbkey=Gene;gene=hyfR;gene_biotype=protein_coding;locus_tag=AB25_RS11555;old_locus_tag=AB25_2838 NZ_JJMC01000045.1 Protein Homology CDS 127664 129676 . + 0 ID=cds-WP_001251559.1;Parent=gene-AB25_RS11555;Dbxref=GenBank:WP_001251559.1;Name=WP_001251559.1;gbkey=CDS;gene=hyfR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311380.2;locus_tag=AB25_RS11555;product=DNA-binding transcriptional regulator HyfR;protein_id=WP_001251559.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 129698 130546 . + . ID=gene-AB25_RS11550;Name=focB;gbkey=Gene;gene=focB;gene_biotype=protein_coding;locus_tag=AB25_RS11550;old_locus_tag=AB25_2839 NZ_JJMC01000045.1 Protein Homology CDS 129698 130546 . + 0 ID=cds-WP_001244724.1;Parent=gene-AB25_RS11550;Dbxref=GenBank:WP_001244724.1;Name=WP_001244724.1;gbkey=CDS;gene=focB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311381.1;locus_tag=AB25_RS11550;product=formate transporter FocB;protein_id=WP_001244724.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 130584 131645 . - . ID=gene-AB25_RS11545;Name=yfgO;gbkey=Gene;gene=yfgO;gene_biotype=protein_coding;locus_tag=AB25_RS11545;old_locus_tag=AB25_2840 NZ_JJMC01000045.1 Protein Homology CDS 130584 131645 . - 0 ID=cds-WP_000892044.1;Parent=gene-AB25_RS11545;Dbxref=GenBank:WP_000892044.1;Name=WP_000892044.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=yfgO;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311382.1;locus_tag=AB25_RS11545;product=AI-2E family transporter;protein_id=WP_000892044.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 131858 133321 . + . ID=gene-AB25_RS11540;Name=bepA;gbkey=Gene;gene=bepA;gene_biotype=protein_coding;locus_tag=AB25_RS11540;old_locus_tag=AB25_2841 NZ_JJMC01000045.1 Protein Homology CDS 131858 133321 . + 0 ID=cds-WP_000489667.1;Parent=gene-AB25_RS11540;Dbxref=GenBank:WP_000489667.1;Name=WP_000489667.1;gbkey=CDS;gene=bepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416989.1;locus_tag=AB25_RS11540;product=beta-barrel assembly-enhancing protease;protein_id=WP_000489667.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 133342 133701 . + . ID=gene-AB25_RS11535;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=AB25_RS11535;old_locus_tag=AB25_2842 NZ_JJMC01000045.1 Protein Homology CDS 133342 133701 . + 0 ID=cds-WP_000166467.1;Parent=gene-AB25_RS11535;Dbxref=GenBank:WP_000166467.1;Name=WP_000166467.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0046685,GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311384.1;locus_tag=AB25_RS11535;product=arsenate reductase (glutaredoxin);protein_id=WP_000166467.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 133839 134540 . - . ID=gene-AB25_RS11530;Name=hda;gbkey=Gene;gene=hda;gene_biotype=protein_coding;locus_tag=AB25_RS11530;old_locus_tag=AB25_2843 NZ_JJMC01000045.1 Protein Homology CDS 133839 134540 . - 0 ID=cds-WP_001307333.1;Parent=gene-AB25_RS11530;Dbxref=GenBank:WP_001307333.1;Name=WP_001307333.1;gbkey=CDS;gene=hda;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416991.2;locus_tag=AB25_RS11530;product=DnaA inactivator Hda;protein_id=WP_001307333.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 134635 135924 . - . ID=gene-AB25_RS11525;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=AB25_RS11525;old_locus_tag=AB25_2844 NZ_JJMC01000045.1 Protein Homology CDS 134635 135924 . - 0 ID=cds-WP_000198328.1;Parent=gene-AB25_RS11525;Dbxref=GenBank:WP_000198328.1;Name=WP_000198328.1;Ontology_term=GO:0022857;gbkey=CDS;gene=uraA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311386.1;locus_tag=AB25_RS11525;product=uracil permease;protein_id=WP_000198328.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 136010 136636 . - . ID=gene-AB25_RS11520;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=AB25_RS11520;old_locus_tag=AB25_2845 NZ_JJMC01000045.1 Protein Homology CDS 136010 136636 . - 0 ID=cds-WP_001295473.1;Parent=gene-AB25_RS11520;Dbxref=GenBank:WP_001295473.1;Name=WP_001295473.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=AB25_RS11520;product=uracil phosphoribosyltransferase;protein_id=WP_001295473.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 136961 137998 . + . ID=gene-AB25_RS11515;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=AB25_RS11515;old_locus_tag=AB25_2847 NZ_JJMC01000045.1 Protein Homology CDS 136961 137998 . + 0 ID=cds-WP_001295474.1;Parent=gene-AB25_RS11515;Dbxref=GenBank:WP_001295474.1;Name=WP_001295474.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311388.1;locus_tag=AB25_RS11515;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_001295474.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 137998 138636 . + . ID=gene-AB25_RS11510;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=AB25_RS11510;old_locus_tag=AB25_2848 NZ_JJMC01000045.1 Protein Homology CDS 137998 138636 . + 0 ID=cds-WP_001028614.1;Parent=gene-AB25_RS11510;Dbxref=GenBank:WP_001028614.1;Name=WP_001028614.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708338.1;locus_tag=AB25_RS11510;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_001028614.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 138807 140873 . + . ID=gene-AB25_RS11505;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=AB25_RS11505;old_locus_tag=AB25_2849 NZ_JJMC01000045.1 Protein Homology CDS 138807 140873 . + 0 ID=cds-WP_000529576.1;Parent=gene-AB25_RS11505;Dbxref=GenBank:WP_000529576.1;Name=WP_000529576.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311390.1;locus_tag=AB25_RS11505;product=polyphosphate kinase 1;protein_id=WP_000529576.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 140878 142419 . + . ID=gene-AB25_RS11500;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=AB25_RS11500;old_locus_tag=AB25_2850 NZ_JJMC01000045.1 Protein Homology CDS 140878 142419 . + 0 ID=cds-WP_001121363.1;Parent=gene-AB25_RS11500;Dbxref=GenBank:WP_001121363.1;Name=WP_001121363.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311391.1;locus_tag=AB25_RS11500;product=exopolyphosphatase;protein_id=WP_001121363.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 142458 144701 . - . ID=gene-AB25_RS11495;Name=pdeF;gbkey=Gene;gene=pdeF;gene_biotype=protein_coding;locus_tag=AB25_RS11495;old_locus_tag=AB25_2851 NZ_JJMC01000045.1 Protein Homology CDS 142458 144701 . - 0 ID=cds-WP_000772759.1;Parent=gene-AB25_RS11495;Dbxref=GenBank:WP_000772759.1;Name=WP_000772759.1;gbkey=CDS;gene=pdeF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311392.1;locus_tag=AB25_RS11495;product=cyclic-guanylate-specific phosphodiesterase PdeF;protein_id=WP_000772759.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 144883 145035 . - . ID=gene-AB25_RS11490;Name=AB25_RS11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS11490;old_locus_tag=AB25_2852 NZ_JJMC01000045.1 Protein Homology CDS 144883 145035 . - 0 ID=cds-WP_000017552.1;Parent=gene-AB25_RS11490;Dbxref=GenBank:WP_000017552.1;Name=WP_000017552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439271.1;locus_tag=AB25_RS11490;product=hypothetical protein;protein_id=WP_000017552.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 145053 145244 . + . ID=gene-AB25_RS0125705;Name=yfgG;gbkey=Gene;gene=yfgG;gene_biotype=protein_coding;locus_tag=AB25_RS0125705;old_locus_tag=AB25_2853 NZ_JJMC01000045.1 Protein Homology CDS 145053 145244 . + 0 ID=cds-WP_000076001.1;Parent=gene-AB25_RS0125705;Dbxref=GenBank:WP_000076001.1;Name=WP_000076001.1;gbkey=CDS;gene=yfgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416999.1;locus_tag=AB25_RS0125705;product=YfgG family protein;protein_id=WP_000076001.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 145555 146073 . + . ID=gene-AB25_RS11485;Name=yfgH;gbkey=Gene;gene=yfgH;gene_biotype=protein_coding;locus_tag=AB25_RS11485;old_locus_tag=AB25_2854 NZ_JJMC01000045.1 Protein Homology CDS 145555 146073 . + 0 ID=cds-WP_001295476.1;Parent=gene-AB25_RS11485;Dbxref=GenBank:WP_001295476.1;Name=WP_001295476.1;Ontology_term=GO:0019867;gbkey=CDS;gene=yfgH;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417000.1;locus_tag=AB25_RS11485;product=glycine zipper 2TM domain-containing protein;protein_id=WP_001295476.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 146089 146628 . + . ID=gene-AB25_RS11480;Name=yfgI;gbkey=Gene;gene=yfgI;gene_biotype=protein_coding;locus_tag=AB25_RS11480;old_locus_tag=AB25_2855 NZ_JJMC01000045.1 Protein Homology CDS 146089 146628 . + 0 ID=cds-WP_000755162.1;Parent=gene-AB25_RS11480;Dbxref=GenBank:WP_000755162.1;Name=WP_000755162.1;gbkey=CDS;gene=yfgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417001.1;locus_tag=AB25_RS11480;product=DUF5384 family protein;protein_id=WP_000755162.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 146723 148300 . - . ID=gene-AB25_RS11475;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=AB25_RS11475;old_locus_tag=AB25_2856 NZ_JJMC01000045.1 Protein Homology CDS 146723 148300 . - 0 ID=cds-WP_000138282.1;Parent=gene-AB25_RS11475;Dbxref=GenBank:WP_000138282.1;Name=WP_000138282.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130181.1;locus_tag=AB25_RS11475;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_000138282.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 148369 149835 . - . ID=gene-AB25_RS11470;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=AB25_RS11470;old_locus_tag=AB25_2857 NZ_JJMC01000045.1 Protein Homology CDS 148369 149835 . - 0 ID=cds-WP_001299507.1;Parent=gene-AB25_RS11470;Dbxref=GenBank:WP_001299507.1;Name=WP_001299507.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151980.1;locus_tag=AB25_RS11470;product=IMP dehydrogenase;protein_id=WP_001299507.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 149997 151367 . + . ID=gene-AB25_RS11465;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=AB25_RS11465;old_locus_tag=AB25_2859 NZ_JJMC01000045.1 Protein Homology CDS 149997 151367 . + 0 ID=cds-WP_000937933.1;Parent=gene-AB25_RS11465;Dbxref=GenBank:WP_000937933.1;Name=WP_000937933.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417004.1;locus_tag=AB25_RS11465;product=exodeoxyribonuclease VII large subunit;protein_id=WP_000937933.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 151364 151579 . - . ID=gene-AB25_RS11460;Name=yfgJ;gbkey=Gene;gene=yfgJ;gene_biotype=protein_coding;locus_tag=AB25_RS11460;old_locus_tag=AB25_2860 NZ_JJMC01000045.1 Protein Homology CDS 151364 151579 . - 0 ID=cds-WP_001297332.1;Parent=gene-AB25_RS11460;Dbxref=GenBank:WP_001297332.1;Name=WP_001297332.1;gbkey=CDS;gene=yfgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417005.2;locus_tag=AB25_RS11460;product=zinc ribbon domain-containing protein;protein_id=WP_001297332.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 151648 153120 . - . ID=gene-AB25_RS11455;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=AB25_RS11455;old_locus_tag=AB25_2861 NZ_JJMC01000045.1 Protein Homology CDS 151648 153120 . - 0 ID=cds-WP_000249410.1;Parent=gene-AB25_RS11455;Dbxref=GenBank:WP_000249410.1;Name=WP_000249410.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417006.2;locus_tag=AB25_RS11455;product=ribosome biogenesis GTPase Der;protein_id=WP_000249410.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 153238 154416 . - . ID=gene-AB25_RS11450;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=AB25_RS11450;old_locus_tag=AB25_2862 NZ_JJMC01000045.1 Protein Homology CDS 153238 154416 . - 0 ID=cds-WP_032171046.1;Parent=gene-AB25_RS11450;Dbxref=GenBank:WP_032171046.1;Name=WP_032171046.1;Ontology_term=GO:0005515;gbkey=CDS;gene=bamB;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708351.1;locus_tag=AB25_RS11450;product=outer membrane protein assembly factor BamB;protein_id=WP_032171046.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 154427 155047 . - . ID=gene-AB25_RS11445;Name=yfgM;gbkey=Gene;gene=yfgM;gene_biotype=protein_coding;locus_tag=AB25_RS11445;old_locus_tag=AB25_2863 NZ_JJMC01000045.1 Protein Homology CDS 154427 155047 . - 0 ID=cds-WP_000409205.1;Parent=gene-AB25_RS11445;Dbxref=GenBank:WP_000409205.1;Name=WP_000409205.1;gbkey=CDS;gene=yfgM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417008.1;locus_tag=AB25_RS11445;product=ancillary SecYEG translocon subunit YfgM;protein_id=WP_000409205.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 155065 156339 . - . ID=gene-AB25_RS11440;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=AB25_RS11440;old_locus_tag=AB25_2864 NZ_JJMC01000045.1 Protein Homology CDS 155065 156339 . - 0 ID=cds-WP_001107167.1;Parent=gene-AB25_RS11440;Dbxref=GenBank:WP_001107167.1;Name=WP_001107167.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311403.1;locus_tag=AB25_RS11440;product=histidine--tRNA ligase;protein_id=WP_001107167.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 156450 157568 . - . ID=gene-AB25_RS11435;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=AB25_RS11435;old_locus_tag=AB25_2865 NZ_JJMC01000045.1 Protein Homology CDS 156450 157568 . - 0 ID=cds-WP_000551807.1;Parent=gene-AB25_RS11435;Dbxref=GenBank:WP_000551807.1;Name=WP_000551807.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311404.1;locus_tag=AB25_RS11435;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_000551807.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 157595 158608 . - . ID=gene-AB25_RS11430;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;locus_tag=AB25_RS11430;old_locus_tag=AB25_2866 NZ_JJMC01000045.1 Protein Homology CDS 157595 158608 . - 0 ID=cds-WP_001090844.1;Parent=gene-AB25_RS11430;Dbxref=GenBank:WP_001090844.1;Name=WP_001090844.1;Ontology_term=GO:0008360,GO:0003677,GO:0016020;gbkey=CDS;gene=rodZ;go_component=membrane|0016020||IEA;go_function=DNA binding|0003677||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311405.1;locus_tag=AB25_RS11430;product=cytoskeleton protein RodZ;protein_id=WP_001090844.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 158893 160047 . - . ID=gene-AB25_RS11425;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=AB25_RS11425;old_locus_tag=AB25_2867 NZ_JJMC01000045.1 Protein Homology CDS 158893 160047 . - 0 ID=cds-WP_000003317.1;Parent=gene-AB25_RS11425;Dbxref=GenBank:WP_000003317.1;Name=WP_000003317.1;gbkey=CDS;gene=rlmN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417012.1;locus_tag=AB25_RS11425;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;protein_id=WP_000003317.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 160197 160628 . - . ID=gene-AB25_RS11420;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=AB25_RS11420;old_locus_tag=AB25_2868 NZ_JJMC01000045.1 Protein Homology CDS 160197 160628 . - 0 ID=cds-WP_000963837.1;Parent=gene-AB25_RS11420;Dbxref=GenBank:WP_000963837.1;Name=WP_000963837.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311407.1;locus_tag=AB25_RS11420;product=nucleoside-diphosphate kinase;protein_id=WP_000963837.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 160777 163089 . - . ID=gene-AB25_RS11415;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=AB25_RS11415;old_locus_tag=AB25_2869 NZ_JJMC01000045.1 Protein Homology CDS 160777 163089 . - 0 ID=cds-WP_001137655.1;Parent=gene-AB25_RS11415;Dbxref=GenBank:WP_001137655.1;Name=WP_001137655.1;Note=penicillin-binding protein 1C;Ontology_term=GO:0009252,GO:0008658,GO:0008955;gbkey=CDS;gene=pbpC;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417014.1;locus_tag=AB25_RS11415;product=peptidoglycan glycosyltransferase PbpC;protein_id=WP_001137655.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 163090 168051 . - . ID=gene-AB25_RS11410;Name=yfhM;gbkey=Gene;gene=yfhM;gene_biotype=protein_coding;locus_tag=AB25_RS11410;old_locus_tag=AB25_2870 NZ_JJMC01000045.1 Protein Homology CDS 163090 168051 . - 0 ID=cds-WP_024169460.1;Parent=gene-AB25_RS11410;Dbxref=GenBank:WP_024169460.1;Name=WP_024169460.1;gbkey=CDS;gene=yfhM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417015.1;locus_tag=AB25_RS11410;product=alpha2-macroglobulin;protein_id=WP_024169460.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 168258 169103 . + . ID=gene-AB25_RS11405;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=AB25_RS11405;old_locus_tag=AB25_2871 NZ_JJMC01000045.1 Protein Homology CDS 168258 169103 . + 0 ID=cds-WP_000108626.1;Parent=gene-AB25_RS11405;Dbxref=GenBank:WP_000108626.1;Name=WP_000108626.1;Ontology_term=GO:0004792;gbkey=CDS;gene=sseA;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417016.4;locus_tag=AB25_RS11405;product=3-mercaptopyruvate sulfurtransferase;protein_id=WP_000108626.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 169439 169564 . + . ID=gene-AB25_RS32480;Name=timP;gbkey=Gene;gene=timP;gene_biotype=protein_coding;locus_tag=AB25_RS32480 NZ_JJMC01000045.1 Protein Homology CDS 169439 169564 . + 0 ID=cds-WP_001385884.1;Parent=gene-AB25_RS32480;Dbxref=GenBank:WP_001385884.1;Name=WP_001385884.1;gbkey=CDS;gene=timP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010283914.1;locus_tag=AB25_RS32480;product=small toxic inner membrane protein TimP;protein_id=WP_001385884.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 169596 170372 . - . ID=gene-AB25_RS11400;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=AB25_RS11400;old_locus_tag=AB25_2872 NZ_JJMC01000045.1 Protein Homology CDS 169596 170372 . - 0 ID=cds-WP_001356210.1;Parent=gene-AB25_RS11400;Dbxref=GenBank:WP_001356210.1;Name=WP_001356210.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708361.2;locus_tag=AB25_RS11400;product=enhanced serine sensitivity protein SseB;protein_id=WP_001356210.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 170514 171797 . - . ID=gene-AB25_RS11395;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=AB25_RS11395;old_locus_tag=AB25_2873 NZ_JJMC01000045.1 Protein Homology CDS 170514 171797 . - 0 ID=cds-WP_000133582.1;Parent=gene-AB25_RS11395;Dbxref=GenBank:WP_000133582.1;Name=WP_000133582.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311416.2;locus_tag=AB25_RS11395;product=aminopeptidase PepB;protein_id=WP_000133582.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 171975 172175 . - . ID=gene-AB25_RS11390;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=AB25_RS11390;old_locus_tag=AB25_2874 NZ_JJMC01000045.1 Protein Homology CDS 171975 172175 . - 0 ID=cds-WP_000523616.1;Parent=gene-AB25_RS11390;Dbxref=GenBank:WP_000523616.1;Name=WP_000523616.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104502.1;locus_tag=AB25_RS11390;product=Fe-S cluster assembly protein IscX;protein_id=WP_000523616.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 172187 172522 . - . ID=gene-AB25_RS11385;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=AB25_RS11385;old_locus_tag=AB25_2875 NZ_JJMC01000045.1 Protein Homology CDS 172187 172522 . - 0 ID=cds-WP_001124469.1;Parent=gene-AB25_RS11385;Dbxref=GenBank:WP_001124469.1;Name=WP_001124469.1;Ontology_term=GO:0016226,GO:0009055,GO:0051537;gbkey=CDS;gene=fdx;go_function=electron transfer activity|0009055||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683702.1;locus_tag=AB25_RS11385;product=ISC system 2Fe-2S type ferredoxin;protein_id=WP_001124469.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 172524 174374 . - . ID=gene-AB25_RS11380;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=AB25_RS11380;old_locus_tag=AB25_2876 NZ_JJMC01000045.1 Protein Homology CDS 172524 174374 . - 0 ID=cds-WP_001196613.1;Parent=gene-AB25_RS11380;Dbxref=GenBank:WP_001196613.1;Name=WP_001196613.1;Ontology_term=GO:0006457,GO:0016226,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559634.1;locus_tag=AB25_RS11380;product=Fe-S protein assembly chaperone HscA;protein_id=WP_001196613.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 174391 174906 . - . ID=gene-AB25_RS11375;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=AB25_RS11375;old_locus_tag=AB25_2877 NZ_JJMC01000045.1 Protein Homology CDS 174391 174906 . - 0 ID=cds-WP_000384413.1;Parent=gene-AB25_RS11375;Dbxref=GenBank:WP_000384413.1;Name=WP_000384413.1;Ontology_term=GO:0051604,GO:0051087;gbkey=CDS;gene=hscB;go_function=protein-folding chaperone binding|0051087||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311420.1;locus_tag=AB25_RS11375;product=co-chaperone HscB;protein_id=WP_000384413.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 175002 175325 . - . ID=gene-AB25_RS11370;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=AB25_RS11370;old_locus_tag=AB25_2879 NZ_JJMC01000045.1 Protein Homology CDS 175002 175325 . - 0 ID=cds-WP_000028953.1;Parent=gene-AB25_RS11370;Dbxref=GenBank:WP_000028953.1;Name=WP_000028953.1;gbkey=CDS;gene=iscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311421.1;locus_tag=AB25_RS11370;product=iron-sulfur cluster assembly protein IscA;protein_id=WP_000028953.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 175342 175728 . - . ID=gene-AB25_RS11365;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=AB25_RS11365;old_locus_tag=AB25_2880 NZ_JJMC01000045.1 Protein Homology CDS 175342 175728 . - 0 ID=cds-WP_000331707.1;Parent=gene-AB25_RS11365;Dbxref=GenBank:WP_000331707.1;Name=WP_000331707.1;Ontology_term=GO:0016226,GO:0005198,GO:0005506,GO:0051536;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA,iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331707.1;locus_tag=AB25_RS11365;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_000331707.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 175756 176970 . - . ID=gene-AB25_RS11360;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;locus_tag=AB25_RS11360;old_locus_tag=AB25_2881 NZ_JJMC01000045.1 Protein Homology CDS 175756 176970 . - 0 ID=cds-WP_001295373.1;Parent=gene-AB25_RS11360;Dbxref=GenBank:WP_001295373.1;Name=WP_001295373.1;gbkey=CDS;gene=iscS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=AB25_RS11360;product=cysteine desulfurase;protein_id=WP_001295373.1;transl_table=11 NZ_JJMC01000045.1 RefSeq gene 177082 177570 . - . ID=gene-AB25_RS11355;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=AB25_RS11355;old_locus_tag=AB25_2882 NZ_JJMC01000045.1 Protein Homology CDS 177082 177570 . - 0 ID=cds-WP_001241357.1;Parent=gene-AB25_RS11355;Dbxref=GenBank:WP_001241357.1;Name=WP_001241357.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002913993.1;locus_tag=AB25_RS11355;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_001241357.1;transl_table=11 ##sequence-region NZ_JJMC01000046.1 1 1171 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000046.1 RefSeq region 1 1171 . + . ID=NZ_JJMC01000046.1:1..1171;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000046.1 RefSeq pseudogene 1 289 . + . ID=gene-AB25_RS11350;Name=AB25_RS11350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS11350;old_locus_tag=AB25_2883;partial=true;pseudo=true;start_range=.,1 NZ_JJMC01000046.1 Protein Homology CDS 1 289 . + 1 ID=cds-AB25_RS11350;Parent=gene-AB25_RS11350;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AB25_RS11350;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJMC01000046.1 RefSeq gene 480 1171 . + . ID=gene-AB25_RS11345;Name=AB25_RS11345;end_range=1171,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS11345;old_locus_tag=AB25_2885;partial=true NZ_JJMC01000046.1 Protein Homology CDS 480 738 . + 0 ID=cds-WP_249402584.1;Parent=gene-AB25_RS11345;Dbxref=GenBank:WP_249402584.1;Name=WP_249402584.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB25_RS11345;partial=true;product=IS1-like element IS1A family transposase;protein_id=WP_249402584.1;transl_table=11 NZ_JJMC01000046.1 Protein Homology CDS 738 1171 . + 2 ID=cds-WP_249402584.1;Parent=gene-AB25_RS11345;Dbxref=GenBank:WP_249402584.1;Name=WP_249402584.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;end_range=1171,.;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB25_RS11345;partial=true;product=IS1-like element IS1A family transposase;protein_id=WP_249402584.1;transl_table=11 ##sequence-region NZ_JJMC01000047.1 1 1335 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000047.1 RefSeq region 1 1335 . + . ID=NZ_JJMC01000047.1:1..1335;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000047.1 RefSeq pseudogene 1 142 . + . ID=gene-AB25_RS30460;Name=AB25_RS30460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS30460;old_locus_tag=AB25_2886;partial=true;pseudo=true;start_range=.,1 NZ_JJMC01000047.1 Protein Homology CDS 1 142 . + 1 ID=cds-AB25_RS30460;Parent=gene-AB25_RS30460;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414793.2;locus_tag=AB25_RS30460;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJMC01000047.1 RefSeq gene 644 1335 . + . ID=gene-AB25_RS11335;Name=AB25_RS11335;end_range=1335,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS11335;old_locus_tag=AB25_2887;partial=true NZ_JJMC01000047.1 Protein Homology CDS 644 893 . + 0 ID=cds-WP_249402582.1-2;Parent=gene-AB25_RS11335;Dbxref=GenBank:WP_249402582.1;Name=WP_249402582.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB25_RS11335;partial=true;product=IS1-like element IS1A family transposase;protein_id=WP_249402582.1;transl_table=11 NZ_JJMC01000047.1 Protein Homology CDS 893 1335 . + 2 ID=cds-WP_249402582.1-2;Parent=gene-AB25_RS11335;Dbxref=GenBank:WP_249402582.1;Name=WP_249402582.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;end_range=1335,.;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB25_RS11335;partial=true;product=IS1-like element IS1A family transposase;protein_id=WP_249402582.1;transl_table=11 ##sequence-region NZ_JJMC01000048.1 1 81331 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000048.1 RefSeq region 1 81331 . + . ID=NZ_JJMC01000048.1:1..81331;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000048.1 RefSeq gene 1 1158 . - . ID=gene-AB25_RS11330;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;locus_tag=AB25_RS11330;old_locus_tag=AB25_2888;partial=true;start_range=.,1 NZ_JJMC01000048.1 Protein Homology CDS 1 1158 . - 0 ID=cds-WP_032296058.1;Parent=gene-AB25_RS11330;Dbxref=GenBank:WP_032296058.1;Name=WP_032296058.1;gbkey=CDS;gene=iscS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=AB25_RS11330;partial=true;product=cysteine desulfurase;protein_id=WP_032296058.1;start_range=.,1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 1270 1758 . - . ID=gene-AB25_RS11325;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=AB25_RS11325;old_locus_tag=AB25_2889 NZ_JJMC01000048.1 Protein Homology CDS 1270 1758 . - 0 ID=cds-WP_001241357.1-2;Parent=gene-AB25_RS11325;Dbxref=GenBank:WP_001241357.1;Name=WP_001241357.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002913993.1;locus_tag=AB25_RS11325;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_001241357.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 2059 2796 . - . ID=gene-AB25_RS11320;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=AB25_RS11320;old_locus_tag=AB25_2890 NZ_JJMC01000048.1 Protein Homology CDS 2059 2796 . - 0 ID=cds-WP_000940018.1;Parent=gene-AB25_RS11320;Dbxref=GenBank:WP_000940018.1;Name=WP_000940018.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=trmJ;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311425.1;locus_tag=AB25_RS11320;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=WP_000940018.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 2915 3718 . + . ID=gene-AB25_RS11315;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=AB25_RS11315;old_locus_tag=AB25_2891 NZ_JJMC01000048.1 Protein Homology CDS 2915 3718 . + 0 ID=cds-WP_000553451.1;Parent=gene-AB25_RS11315;Dbxref=GenBank:WP_000553451.1;Name=WP_000553451.1;Ontology_term=GO:0046854,GO:0008934;gbkey=CDS;gene=suhB;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA;go_process=phosphatidylinositol phosphate biosynthetic process|0046854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553460.1;locus_tag=AB25_RS11315;product=inositol-1-monophosphatase;protein_id=WP_000553451.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 3863 4717 . + . ID=gene-AB25_RS11310;Name=yfhR;gbkey=Gene;gene=yfhR;gene_biotype=protein_coding;locus_tag=AB25_RS11310;old_locus_tag=AB25_2892 NZ_JJMC01000048.1 Protein Homology CDS 3863 4717 . + 0 ID=cds-WP_001299515.1;Parent=gene-AB25_RS11310;Dbxref=GenBank:WP_001299515.1;Name=WP_001299515.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhR;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311427.2;locus_tag=AB25_RS11310;product=alpha/beta hydrolase;protein_id=WP_001299515.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 4908 6188 . + . ID=gene-AB25_RS11305;Name=csiE;gbkey=Gene;gene=csiE;gene_biotype=protein_coding;locus_tag=AB25_RS11305;old_locus_tag=AB25_2893 NZ_JJMC01000048.1 Protein Homology CDS 4908 6188 . + 0 ID=cds-WP_001681318.1;Parent=gene-AB25_RS11305;Dbxref=GenBank:WP_001681318.1;Name=WP_001681318.1;gbkey=CDS;gene=csiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417030.2;locus_tag=AB25_RS11305;product=stationary phase inducible protein CsiE;protein_id=WP_001681318.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 6180 7319 . - . ID=gene-AB25_RS11300;Name=hcaT;gbkey=Gene;gene=hcaT;gene_biotype=protein_coding;locus_tag=AB25_RS11300;old_locus_tag=AB25_2894 NZ_JJMC01000048.1 Protein Homology CDS 6180 7319 . - 0 ID=cds-WP_000244193.1;Parent=gene-AB25_RS11300;Dbxref=GenBank:WP_000244193.1;Name=WP_000244193.1;gbkey=CDS;gene=hcaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417031.1;locus_tag=AB25_RS11300;product=3-phenylpropionate MFS transporter;protein_id=WP_000244193.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 7479 8369 . - . ID=gene-AB25_RS11295;Name=hcaR;gbkey=Gene;gene=hcaR;gene_biotype=protein_coding;locus_tag=AB25_RS11295;old_locus_tag=AB25_2895 NZ_JJMC01000048.1 Protein Homology CDS 7479 8369 . - 0 ID=cds-WP_000423261.1;Parent=gene-AB25_RS11295;Dbxref=GenBank:WP_000423261.1;Name=WP_000423261.1;gbkey=CDS;gene=hcaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417032.1;locus_tag=AB25_RS11295;product=DNA-binding transcriptional regulator HcaR;protein_id=WP_000423261.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 8505 9866 . + . ID=gene-AB25_RS11290;Name=hcaE;gbkey=Gene;gene=hcaE;gene_biotype=protein_coding;locus_tag=AB25_RS11290;old_locus_tag=AB25_2896 NZ_JJMC01000048.1 Protein Homology CDS 8505 9866 . + 0 ID=cds-WP_032171050.1;Parent=gene-AB25_RS11290;Dbxref=GenBank:WP_032171050.1;Name=WP_032171050.1;Ontology_term=GO:0019380,GO:0008695;gbkey=CDS;gene=hcaE;go_function=3-phenylpropionate dioxygenase activity|0008695||IEA;go_process=3-phenylpropionate catabolic process|0019380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311431.1;locus_tag=AB25_RS11290;product=3-phenylpropionate/cinnamic acid dioxygenase subunit alpha;protein_id=WP_032171050.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 9863 10381 . + . ID=gene-AB25_RS11285;Name=hcaF;gbkey=Gene;gene=hcaF;gene_biotype=protein_coding;locus_tag=AB25_RS11285;old_locus_tag=AB25_2897 NZ_JJMC01000048.1 Protein Homology CDS 9863 10381 . + 0 ID=cds-WP_001276072.1;Parent=gene-AB25_RS11285;Dbxref=GenBank:WP_001276072.1;Name=WP_001276072.1;Ontology_term=GO:0019380,GO:0008695;gbkey=CDS;gene=hcaF;go_function=3-phenylpropionate dioxygenase activity|0008695||IEA;go_process=3-phenylpropionate catabolic process|0019380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417034.1;locus_tag=AB25_RS11285;product=3-phenylpropionate/cinnamic acid dioxygenase subunit beta;protein_id=WP_001276072.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 10381 10701 . + . ID=gene-AB25_RS11280;Name=hcaC;gbkey=Gene;gene=hcaC;gene_biotype=protein_coding;locus_tag=AB25_RS11280;old_locus_tag=AB25_2898 NZ_JJMC01000048.1 Protein Homology CDS 10381 10701 . + 0 ID=cds-WP_001080102.1;Parent=gene-AB25_RS11280;Dbxref=GenBank:WP_001080102.1;Name=WP_001080102.1;Ontology_term=GO:0051537;gbkey=CDS;gene=hcaC;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311433.1;locus_tag=AB25_RS11280;product=bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit;protein_id=WP_001080102.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 10698 11510 . + . ID=gene-AB25_RS11275;Name=hcaB;gbkey=Gene;gene=hcaB;gene_biotype=protein_coding;gene_synonym=phdD,yfhX;locus_tag=AB25_RS11275;old_locus_tag=AB25_2899 NZ_JJMC01000048.1 Protein Homology CDS 10698 11510 . + 0 ID=cds-WP_001281377.1;Parent=gene-AB25_RS11275;Dbxref=GenBank:WP_001281377.1;Name=WP_001281377.1;gbkey=CDS;gene=hcaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311434.1;locus_tag=AB25_RS11275;product=3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase;protein_id=WP_001281377.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 11520 12722 . + . ID=gene-AB25_RS11270;Name=hcaD;gbkey=Gene;gene=hcaD;gene_biotype=protein_coding;locus_tag=AB25_RS11270;old_locus_tag=AB25_2900 NZ_JJMC01000048.1 Protein Homology CDS 11520 12722 . + 0 ID=cds-WP_000660797.1;Parent=gene-AB25_RS11270;Dbxref=GenBank:WP_000660797.1;Name=WP_000660797.1;gbkey=CDS;gene=hcaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417037.1;locus_tag=AB25_RS11270;product=phenylpropionate dioxygenase ferredoxin reductase subunit;protein_id=WP_000660797.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 12819 13241 . + . ID=gene-AB25_RS11265;Name=yphA;gbkey=Gene;gene=yphA;gene_biotype=protein_coding;locus_tag=AB25_RS11265;old_locus_tag=AB25_2901 NZ_JJMC01000048.1 Protein Homology CDS 12819 13241 . + 0 ID=cds-WP_001094726.1;Parent=gene-AB25_RS11265;Dbxref=GenBank:WP_001094726.1;Name=WP_001094726.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yphA;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417038.4;locus_tag=AB25_RS11265;product=DoxX family protein;protein_id=WP_001094726.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 13289 14161 . - . ID=gene-AB25_RS11260;Name=yphB;gbkey=Gene;gene=yphB;gene_biotype=protein_coding;locus_tag=AB25_RS11260;old_locus_tag=AB25_2902 NZ_JJMC01000048.1 Protein Homology CDS 13289 14161 . - 0 ID=cds-WP_000158547.1;Parent=gene-AB25_RS11260;Dbxref=GenBank:WP_000158547.1;Name=WP_000158547.1;gbkey=CDS;gene=yphB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417039.1;locus_tag=AB25_RS11260;product=aldose 1-epimerase;protein_id=WP_000158547.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 14173 15267 . - . ID=gene-AB25_RS11255;Name=yphC;gbkey=Gene;gene=yphC;gene_biotype=protein_coding;locus_tag=AB25_RS11255;old_locus_tag=AB25_2903 NZ_JJMC01000048.1 Protein Homology CDS 14173 15267 . - 0 ID=cds-WP_000700809.1;Parent=gene-AB25_RS11255;Dbxref=GenBank:WP_000700809.1;Name=WP_000700809.1;Ontology_term=GO:0008270,GO:0016491,GO:0030554;gbkey=CDS;gene=yphC;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708383.1;locus_tag=AB25_RS11255;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_000700809.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 15300 16298 . - . ID=gene-AB25_RS11250;Name=yphD;gbkey=Gene;gene=yphD;gene_biotype=protein_coding;locus_tag=AB25_RS11250;old_locus_tag=AB25_2904 NZ_JJMC01000048.1 Protein Homology CDS 15300 16298 . - 0 ID=cds-WP_001276663.1;Parent=gene-AB25_RS11250;Dbxref=GenBank:WP_001276663.1;Name=WP_001276663.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;gene=yphD;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417041.1;locus_tag=AB25_RS11250;product=ABC transporter permease;protein_id=WP_001276663.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 16323 17834 . - . ID=gene-AB25_RS11245;Name=yphE;gbkey=Gene;gene=yphE;gene_biotype=protein_coding;locus_tag=AB25_RS11245;old_locus_tag=AB25_2905 NZ_JJMC01000048.1 Protein Homology CDS 16323 17834 . - 0 ID=cds-WP_000493471.1;Parent=gene-AB25_RS11245;Dbxref=GenBank:WP_000493471.1;Name=WP_000493471.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=yphE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417042.1;locus_tag=AB25_RS11245;product=sugar ABC transporter ATP-binding protein;protein_id=WP_000493471.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 17857 18840 . - . ID=gene-AB25_RS11240;Name=yphF;gbkey=Gene;gene=yphF;gene_biotype=protein_coding;locus_tag=AB25_RS11240;old_locus_tag=AB25_2906 NZ_JJMC01000048.1 Protein Homology CDS 17857 18840 . - 0 ID=cds-WP_001374471.1;Parent=gene-AB25_RS11240;Dbxref=GenBank:WP_001374471.1;Name=WP_001374471.1;gbkey=CDS;gene=yphF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311441.1;locus_tag=AB25_RS11240;product=substrate-binding domain-containing protein;protein_id=WP_001374471.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 18937 22218 . - . ID=gene-AB25_RS11235;Name=yphG;gbkey=Gene;gene=yphG;gene_biotype=protein_coding;locus_tag=AB25_RS11235;old_locus_tag=AB25_2907 NZ_JJMC01000048.1 Protein Homology CDS 18937 22218 . - 0 ID=cds-WP_001356306.1;Parent=gene-AB25_RS11235;Dbxref=GenBank:WP_001356306.1;Name=WP_001356306.1;gbkey=CDS;gene=yphG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417044.4;locus_tag=AB25_RS11235;product=DUF5107 domain-containing protein;protein_id=WP_001356306.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 22336 23529 . + . ID=gene-AB25_RS11230;Name=yphH;gbkey=Gene;gene=yphH;gene_biotype=protein_coding;locus_tag=AB25_RS11230;old_locus_tag=AB25_2908 NZ_JJMC01000048.1 Protein Homology CDS 22336 23529 . + 0 ID=cds-WP_001200787.1;Parent=gene-AB25_RS11230;Dbxref=GenBank:WP_001200787.1;Name=WP_001200787.1;gbkey=CDS;gene=yphH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417045.4;locus_tag=AB25_RS11230;product=ROK family protein;protein_id=WP_001200787.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 23593 24846 . - . ID=gene-AB25_RS11225;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=AB25_RS11225;old_locus_tag=AB25_2909 NZ_JJMC01000048.1 Protein Homology CDS 23593 24846 . - 0 ID=cds-WP_000919159.1;Parent=gene-AB25_RS11225;Dbxref=GenBank:WP_000919159.1;Name=WP_000919159.1;gbkey=CDS;gene=glyA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=AB25_RS11225;product=serine hydroxymethyltransferase;protein_id=WP_000919159.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 25175 26365 . + . ID=gene-AB25_RS11220;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=AB25_RS11220;old_locus_tag=AB25_2910 NZ_JJMC01000048.1 Protein Homology CDS 25175 26365 . + 0 ID=cds-WP_000883122.1;Parent=gene-AB25_RS11220;Dbxref=GenBank:WP_000883122.1;Name=WP_000883122.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase NAD(P)H activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417047.1;locus_tag=AB25_RS11220;product=NO-inducible flavohemoprotein;protein_id=WP_000883122.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 26410 26748 . - . ID=gene-AB25_RS11215;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=AB25_RS11215;old_locus_tag=AB25_2911 NZ_JJMC01000048.1 Protein Homology CDS 26410 26748 . - 0 ID=cds-WP_000717694.1;Parent=gene-AB25_RS11215;Dbxref=GenBank:WP_000717694.1;Name=WP_000717694.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373484.1;locus_tag=AB25_RS11215;product=nitrogen regulatory protein P-II;protein_id=WP_000717694.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 26809 28143 . - . ID=gene-AB25_RS11210;Name=glrR;gbkey=Gene;gene=glrR;gene_biotype=protein_coding;locus_tag=AB25_RS11210;old_locus_tag=AB25_2912 NZ_JJMC01000048.1 Protein Homology CDS 26809 28143 . - 0 ID=cds-WP_001298983.1;Parent=gene-AB25_RS11210;Dbxref=GenBank:WP_001298983.1;Name=WP_001298983.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=glrR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311447.1;locus_tag=AB25_RS11210;product=two-component system response regulator GlrR;protein_id=WP_001298983.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 28133 28846 . - . ID=gene-AB25_RS11205;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=protein_coding;locus_tag=AB25_RS11205;old_locus_tag=AB25_2913 NZ_JJMC01000048.1 Protein Homology CDS 28133 28846 . - 0 ID=cds-WP_001392465.1;Parent=gene-AB25_RS11205;Dbxref=GenBank:WP_001392465.1;Name=WP_001392465.1;gbkey=CDS;gene=qseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311448.1;locus_tag=AB25_RS11205;product=two-component system QseEF-associated lipoprotein QseG;protein_id=WP_001392465.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 29011 30438 . - . ID=gene-AB25_RS11200;Name=qseE;gbkey=Gene;gene=qseE;gene_biotype=protein_coding;locus_tag=AB25_RS11200;old_locus_tag=AB25_2914 NZ_JJMC01000048.1 Protein Homology CDS 29011 30438 . - 0 ID=cds-WP_001365683.1;Parent=gene-AB25_RS11200;Dbxref=GenBank:WP_001365683.1;Name=WP_001365683.1;gbkey=CDS;gene=qseE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417051.2;locus_tag=AB25_RS11200;product=two component system sensor histidine kinase QseE/GlrK;protein_id=WP_001365683.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 30996 34883 . - . ID=gene-AB25_RS11195;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=AB25_RS11195;old_locus_tag=AB25_2915 NZ_JJMC01000048.1 Protein Homology CDS 30996 34883 . - 0 ID=cds-WP_000970134.1;Parent=gene-AB25_RS11195;Dbxref=GenBank:WP_000970134.1;Name=WP_000970134.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311450.1;locus_tag=AB25_RS11195;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_000970134.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 35141 36697 . + . ID=gene-AB25_RS11190;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=AB25_RS11190;old_locus_tag=AB25_2916 NZ_JJMC01000048.1 Protein Homology CDS 35141 36697 . + 0 ID=cds-WP_000734212.1;Parent=gene-AB25_RS11190;Dbxref=GenBank:WP_000734212.1;Name=WP_000734212.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltF;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417053.2;locus_tag=AB25_RS11190;product=membrane-bound lytic murein transglycosylase MltF;protein_id=WP_000734212.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 36694 37197 . - . ID=gene-AB25_RS11185;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=AB25_RS11185;old_locus_tag=AB25_2917 NZ_JJMC01000048.1 Protein Homology CDS 36694 37197 . - 0 ID=cds-WP_032171081.1;Parent=gene-AB25_RS11185;Dbxref=GenBank:WP_032171081.1;Name=WP_032171081.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417054.2;locus_tag=AB25_RS11185;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_032171081.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 37255 37890 . - . ID=gene-AB25_RS11180;Name=yfhb;gbkey=Gene;gene=yfhb;gene_biotype=protein_coding;locus_tag=AB25_RS11180;old_locus_tag=AB25_2918 NZ_JJMC01000048.1 Protein Homology CDS 37255 37890 . - 0 ID=cds-WP_000190655.1;Parent=gene-AB25_RS11180;Dbxref=GenBank:WP_000190655.1;Name=WP_000190655.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhb;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417055.4;locus_tag=AB25_RS11180;product=phosphatidylglycerophosphatase C;protein_id=WP_000190655.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 38099 38947 . + . ID=gene-AB25_RS11175;Name=yfhH;gbkey=Gene;gene=yfhH;gene_biotype=protein_coding;locus_tag=AB25_RS11175;old_locus_tag=AB25_2919 NZ_JJMC01000048.1 Protein Homology CDS 38099 38947 . + 0 ID=cds-WP_001013779.1;Parent=gene-AB25_RS11175;Dbxref=GenBank:WP_001013779.1;Name=WP_001013779.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yfhH;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417056.2;locus_tag=AB25_RS11175;product=MurR/RpiR family transcriptional regulator;protein_id=WP_001013779.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 39584 40231 . + . ID=gene-AB25_RS0125725;Name=AB25_RS0125725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0125725 NZ_JJMC01000048.1 Protein Homology CDS 39584 40231 . + 0 ID=cds-WP_001288815.1;Parent=gene-AB25_RS0125725;Dbxref=GenBank:WP_001288815.1;Name=WP_001288815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001288814.1;locus_tag=AB25_RS0125725;product=hypothetical protein;protein_id=WP_001288815.1;transl_table=11 NZ_JJMC01000048.1 RefSeq pseudogene 40313 40441 . - . ID=gene-AB25_RS28620;Name=AB25_RS28620;end_range=40441,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS28620;partial=true;pseudo=true NZ_JJMC01000048.1 Protein Homology CDS 40313 40441 . - 0 ID=cds-AB25_RS28620;Parent=gene-AB25_RS28620;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0000150,GO:0003677;end_range=40441,.;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308311.1;locus_tag=AB25_RS28620;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 40526 41071 . + . ID=gene-AB25_RS11170;Name=AB25_RS11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS11170;old_locus_tag=AB25_2921 NZ_JJMC01000048.1 Protein Homology CDS 40526 41071 . + 0 ID=cds-WP_032171053.1;Parent=gene-AB25_RS11170;Dbxref=GenBank:WP_032171053.1;Name=WP_032171053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001533330.1;locus_tag=AB25_RS11170;product=serine acetyltransferase;protein_id=WP_032171053.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 41082 41654 . - . ID=gene-AB25_RS11165;Name=AB25_RS11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS11165;old_locus_tag=AB25_2922 NZ_JJMC01000048.1 Protein Homology CDS 41082 41654 . - 0 ID=cds-WP_032171054.1;Parent=gene-AB25_RS11165;Dbxref=GenBank:WP_032171054.1;Name=WP_032171054.1;Ontology_term=GO:0098004;gbkey=CDS;go_process=virus tail fiber assembly|0098004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233434.1;locus_tag=AB25_RS11165;product=tail fiber assembly protein;protein_id=WP_032171054.1;transl_table=11 NZ_JJMC01000048.1 RefSeq pseudogene 41654 42298 . - . ID=gene-AB25_RS32485;Name=AB25_RS32485;end_range=42298,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32485;old_locus_tag=AB25_2923;partial=true;pseudo=true NZ_JJMC01000048.1 Protein Homology CDS 41654 42298 . - 0 ID=cds-AB25_RS32485;Parent=gene-AB25_RS32485;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=42298,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002431461.1;locus_tag=AB25_RS32485;partial=true;product=tail fiber protein;pseudo=true;transl_table=11 NZ_JJMC01000048.1 RefSeq pseudogene 42900 43508 . + . ID=gene-AB25_RS32490;Name=AB25_RS32490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32490;partial=true;pseudo=true;start_range=.,42900 NZ_JJMC01000048.1 Protein Homology CDS 42900 43508 . + 0 ID=cds-AB25_RS32490;Parent=gene-AB25_RS32490;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051352.1;locus_tag=AB25_RS32490;partial=true;product=hypothetical protein;pseudo=true;start_range=.,42900;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 43511 44812 . + . ID=gene-AB25_RS11150;Name=AB25_RS11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS11150;old_locus_tag=AB25_2927 NZ_JJMC01000048.1 Protein Homology CDS 43511 44812 . + 0 ID=cds-WP_032171062.1;Parent=gene-AB25_RS11150;Dbxref=GenBank:WP_032171062.1;Name=WP_032171062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001386185.1;locus_tag=AB25_RS11150;product=DUF2800 domain-containing protein;protein_id=WP_032171062.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 44828 45376 . + . ID=gene-AB25_RS11145;Name=AB25_RS11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS11145;old_locus_tag=AB25_2928 NZ_JJMC01000048.1 Protein Homology CDS 44828 45376 . + 0 ID=cds-WP_000769009.1;Parent=gene-AB25_RS11145;Dbxref=GenBank:WP_000769009.1;Name=WP_000769009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000769009.1;locus_tag=AB25_RS11145;product=DUF2815 family protein;protein_id=WP_000769009.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 45428 46069 . + . ID=gene-AB25_RS11140;Name=AB25_RS11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS11140;old_locus_tag=AB25_2929 NZ_JJMC01000048.1 Protein Homology CDS 45428 46069 . + 0 ID=cds-WP_001520089.1;Parent=gene-AB25_RS11140;Dbxref=GenBank:WP_001520089.1;Name=WP_001520089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001520089.1;locus_tag=AB25_RS11140;product=Nmad5 family putative nucleotide modification protein;protein_id=WP_001520089.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 46063 46752 . - . ID=gene-AB25_RS11135;Name=AB25_RS11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS11135;old_locus_tag=AB25_2930 NZ_JJMC01000048.1 Protein Homology CDS 46063 46752 . - 0 ID=cds-WP_032171064.1;Parent=gene-AB25_RS11135;Dbxref=GenBank:WP_032171064.1;Name=WP_032171064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000215799.1;locus_tag=AB25_RS11135;product=hypothetical protein;protein_id=WP_032171064.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 46814 48877 . + . ID=gene-AB25_RS11130;Name=AB25_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS11130;old_locus_tag=AB25_2931 NZ_JJMC01000048.1 Protein Homology CDS 46814 48877 . + 0 ID=cds-WP_032171065.1;Parent=gene-AB25_RS11130;Dbxref=GenBank:WP_032171065.1;Name=WP_032171065.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000065468.1;locus_tag=AB25_RS11130;product=DNA polymerase;protein_id=WP_032171065.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 48883 49098 . + . ID=gene-AB25_RS11125;Name=AB25_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS11125;old_locus_tag=AB25_2932 NZ_JJMC01000048.1 Protein Homology CDS 48883 49098 . + 0 ID=cds-WP_001520092.1;Parent=gene-AB25_RS11125;Dbxref=GenBank:WP_001520092.1;Name=WP_001520092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001419980.1;locus_tag=AB25_RS11125;product=ANR family transcriptional regulator;protein_id=WP_001520092.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 49095 49394 . + . ID=gene-AB25_RS11120;Name=AB25_RS11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS11120;old_locus_tag=AB25_2933 NZ_JJMC01000048.1 Protein Homology CDS 49095 49394 . + 0 ID=cds-WP_032171068.1;Parent=gene-AB25_RS11120;Dbxref=GenBank:WP_032171068.1;Name=WP_032171068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001385925.1;locus_tag=AB25_RS11120;product=DUF4406 domain-containing protein;protein_id=WP_032171068.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 49384 49653 . + . ID=gene-AB25_RS11115;Name=AB25_RS11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS11115;old_locus_tag=AB25_2934 NZ_JJMC01000048.1 Protein Homology CDS 49384 49653 . + 0 ID=cds-WP_032171069.1;Parent=gene-AB25_RS11115;Dbxref=GenBank:WP_032171069.1;Name=WP_032171069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000312939.1;locus_tag=AB25_RS11115;product=VRR-NUC domain-containing protein;protein_id=WP_032171069.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 49658 50188 . - . ID=gene-AB25_RS11110;Name=AB25_RS11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS11110;old_locus_tag=AB25_2935 NZ_JJMC01000048.1 Protein Homology CDS 49658 50188 . - 0 ID=cds-WP_244579149.1;Parent=gene-AB25_RS11110;Dbxref=GenBank:WP_244579149.1;Name=WP_244579149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001388886.1;locus_tag=AB25_RS11110;product=hypothetical protein;protein_id=WP_244579149.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 50181 50429 . - . ID=gene-AB25_RS0125740;Name=AB25_RS0125740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0125740 NZ_JJMC01000048.1 GeneMarkS-2+ CDS 50181 50429 . - 0 ID=cds-WP_000559954.1;Parent=gene-AB25_RS0125740;Dbxref=GenBank:WP_000559954.1;Name=WP_000559954.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB25_RS0125740;product=hypothetical protein;protein_id=WP_000559954.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 50453 51331 . - . ID=gene-AB25_RS11105;Name=AB25_RS11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS11105;old_locus_tag=AB25_2936 NZ_JJMC01000048.1 Protein Homology CDS 50453 51331 . - 0 ID=cds-WP_032171074.1;Parent=gene-AB25_RS11105;Dbxref=GenBank:WP_032171074.1;Name=WP_032171074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001730284.1;locus_tag=AB25_RS11105;product=hypothetical protein;protein_id=WP_032171074.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 51399 52796 . + . ID=gene-AB25_RS11100;Name=AB25_RS11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS11100;old_locus_tag=AB25_2937 NZ_JJMC01000048.1 Protein Homology CDS 51399 52796 . + 0 ID=cds-WP_032171075.1;Parent=gene-AB25_RS11100;Dbxref=GenBank:WP_032171075.1;Name=WP_032171075.1;Ontology_term=GO:0005524,GO:0140658;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000384174.1;locus_tag=AB25_RS11100;product=DEAD/DEAH box helicase;protein_id=WP_032171075.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 52990 54387 . - . ID=gene-AB25_RS11095;Name=AB25_RS11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS11095;old_locus_tag=AB25_2938 NZ_JJMC01000048.1 Protein Homology CDS 52990 54387 . - 0 ID=cds-WP_032179894.1;Parent=gene-AB25_RS11095;Dbxref=GenBank:WP_032179894.1;Name=WP_032179894.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001693020.1;locus_tag=AB25_RS11095;product=tyrosine-type recombinase/integrase;protein_id=WP_032179894.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 54602 54862 . + . ID=gene-AB25_RS0125745;Name=yfhL;gbkey=Gene;gene=yfhL;gene_biotype=protein_coding;locus_tag=AB25_RS0125745;old_locus_tag=AB25_2939 NZ_JJMC01000048.1 Protein Homology CDS 54602 54862 . + 0 ID=cds-WP_000054752.1;Parent=gene-AB25_RS0125745;Dbxref=GenBank:WP_000054752.1;Name=WP_000054752.1;gbkey=CDS;gene=yfhL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708414.1;locus_tag=AB25_RS0125745;product=4Fe-4S dicluster ferredoxin YfhL;protein_id=WP_000054752.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 55056 55136 . - . ID=gene-AB25_RS0125750;Name=shoB;gbkey=Gene;gene=shoB;gene_biotype=protein_coding;locus_tag=AB25_RS0125750 NZ_JJMC01000048.1 Protein Homology CDS 55056 55136 . - 0 ID=cds-WP_000128776.1;Parent=gene-AB25_RS0125750;Dbxref=GenBank:WP_000128776.1;Name=WP_000128776.1;gbkey=CDS;gene=shoB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791251.1;locus_tag=AB25_RS0125750;product=type I toxin-antitoxin system toxin ShoB;protein_id=WP_000128776.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 55557 55937 . - . ID=gene-AB25_RS11090;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=AB25_RS11090;old_locus_tag=AB25_2940 NZ_JJMC01000048.1 Protein Homology CDS 55557 55937 . - 0 ID=cds-WP_000986023.1;Parent=gene-AB25_RS11090;Dbxref=GenBank:WP_000986023.1;Name=WP_000986023.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417058.1;locus_tag=AB25_RS11090;product=holo-ACP synthase;protein_id=WP_000986023.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 55937 56668 . - . ID=gene-AB25_RS11085;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=AB25_RS11085;old_locus_tag=AB25_2941 NZ_JJMC01000048.1 Protein Homology CDS 55937 56668 . - 0 ID=cds-WP_001297412.1;Parent=gene-AB25_RS11085;Dbxref=GenBank:WP_001297412.1;Name=WP_001297412.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311457.1;locus_tag=AB25_RS11085;product=pyridoxine 5'-phosphate synthase;protein_id=WP_001297412.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 56680 57408 . - . ID=gene-AB25_RS11080;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=AB25_RS11080;old_locus_tag=AB25_2942 NZ_JJMC01000048.1 Protein Homology CDS 56680 57408 . - 0 ID=cds-WP_000399404.1;Parent=gene-AB25_RS11080;Dbxref=GenBank:WP_000399404.1;Name=WP_000399404.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311458.1;locus_tag=AB25_RS11080;product=DNA repair protein RecO;protein_id=WP_000399404.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 57420 58325 . - . ID=gene-AB25_RS11075;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=AB25_RS11075;old_locus_tag=AB25_2943 NZ_JJMC01000048.1 Protein Homology CDS 57420 58325 . - 0 ID=cds-WP_000020749.1;Parent=gene-AB25_RS11075;Dbxref=GenBank:WP_000020749.1;Name=WP_000020749.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417061.1;locus_tag=AB25_RS11075;product=GTPase Era;protein_id=WP_000020749.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 58322 59002 . - . ID=gene-AB25_RS11070;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=AB25_RS11070;old_locus_tag=AB25_2944 NZ_JJMC01000048.1 Protein Homology CDS 58322 59002 . - 0 ID=cds-WP_001068343.1;Parent=gene-AB25_RS11070;Dbxref=GenBank:WP_001068343.1;Name=WP_001068343.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960048.1;locus_tag=AB25_RS11070;product=ribonuclease III;protein_id=WP_001068343.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 59274 60248 . - . ID=gene-AB25_RS11065;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=AB25_RS11065;old_locus_tag=AB25_2945 NZ_JJMC01000048.1 Protein Homology CDS 59274 60248 . - 0 ID=cds-WP_000002541.1;Parent=gene-AB25_RS11065;Dbxref=GenBank:WP_000002541.1;Name=WP_000002541.1;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417063.1;locus_tag=AB25_RS11065;product=signal peptidase I;protein_id=WP_000002541.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 60264 62063 . - . ID=gene-AB25_RS11060;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=AB25_RS11060;old_locus_tag=AB25_2946 NZ_JJMC01000048.1 Protein Homology CDS 60264 62063 . - 0 ID=cds-WP_000790168.1;Parent=gene-AB25_RS11060;Dbxref=GenBank:WP_000790168.1;Name=WP_000790168.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311462.1;locus_tag=AB25_RS11060;product=translation elongation factor 4;protein_id=WP_000790168.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 62261 62740 . - . ID=gene-AB25_RS11055;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=AB25_RS11055;old_locus_tag=AB25_2947 NZ_JJMC01000048.1 Protein Homology CDS 62261 62740 . - 0 ID=cds-WP_001374481.1;Parent=gene-AB25_RS11055;Dbxref=GenBank:WP_001374481.1;Name=WP_001374481.1;gbkey=CDS;gene=rseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417065.1;locus_tag=AB25_RS11055;product=SoxR-reducing system protein RseC;protein_id=WP_001374481.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 62737 63693 . - . ID=gene-AB25_RS11050;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=AB25_RS11050;old_locus_tag=AB25_2948 NZ_JJMC01000048.1 Protein Homology CDS 62737 63693 . - 0 ID=cds-WP_000812053.1;Parent=gene-AB25_RS11050;Dbxref=GenBank:WP_000812053.1;Name=WP_000812053.1;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311464.1;locus_tag=AB25_RS11050;product=sigma-E factor regulatory protein RseB;protein_id=WP_000812053.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 63693 64343 . - . ID=gene-AB25_RS11045;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=AB25_RS11045;old_locus_tag=AB25_2949 NZ_JJMC01000048.1 Protein Homology CDS 63693 64343 . - 0 ID=cds-WP_001168459.1;Parent=gene-AB25_RS11045;Dbxref=GenBank:WP_001168459.1;Name=WP_001168459.1;Ontology_term=GO:0016989;gbkey=CDS;gene=rseA;go_function=sigma factor antagonist activity|0016989||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417067.1;locus_tag=AB25_RS11045;product=anti-sigma-E factor RseA;protein_id=WP_001168459.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 64376 64951 . - . ID=gene-AB25_RS11040;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=AB25_RS11040;old_locus_tag=AB25_2950 NZ_JJMC01000048.1 Protein Homology CDS 64376 64951 . - 0 ID=cds-WP_001295364.1;Parent=gene-AB25_RS11040;Dbxref=GenBank:WP_001295364.1;Name=WP_001295364.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoE;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005070454.1;locus_tag=AB25_RS11040;product=RNA polymerase sigma factor RpoE;protein_id=WP_001295364.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 64948 65103 . - . ID=gene-AB25_RS31745;Name=rseD;gbkey=Gene;gene=rseD;gene_biotype=protein_coding;locus_tag=AB25_RS31745 NZ_JJMC01000048.1 Protein Homology CDS 64948 65103 . - 0 ID=cds-WP_001303621.1;Parent=gene-AB25_RS31745;Dbxref=GenBank:WP_001303621.1;Name=WP_001303621.1;gbkey=CDS;gene=rseD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518806.1;locus_tag=AB25_RS31745;product=rpoE leader peptide RseD;protein_id=WP_001303621.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 65359 66981 . + . ID=gene-AB25_RS11035;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=AB25_RS11035;old_locus_tag=AB25_2951 NZ_JJMC01000048.1 Protein Homology CDS 65359 66981 . + 0 ID=cds-WP_001094499.1;Parent=gene-AB25_RS11035;Dbxref=GenBank:WP_001094499.1;Name=WP_001094499.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417069.1;locus_tag=AB25_RS11035;product=L-aspartate oxidase;protein_id=WP_001094499.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 66966 67703 . - . ID=gene-AB25_RS11030;Name=trmN;gbkey=Gene;gene=trmN;gene_biotype=protein_coding;locus_tag=AB25_RS11030;old_locus_tag=AB25_2952 NZ_JJMC01000048.1 Protein Homology CDS 66966 67703 . - 0 ID=cds-WP_001356308.1;Parent=gene-AB25_RS11030;Dbxref=GenBank:WP_001356308.1;Name=WP_001356308.1;Ontology_term=GO:0030488,GO:0003676,GO:0016430;gbkey=CDS;gene=trmN;go_function=nucleic acid binding|0003676||IEA,tRNA (adenine-N6)-methyltransferase activity|0016430||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417070.2;locus_tag=AB25_RS11030;product=tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN;protein_id=WP_001356308.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 67835 69169 . + . ID=gene-AB25_RS11025;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=AB25_RS11025;old_locus_tag=AB25_2953 NZ_JJMC01000048.1 Protein Homology CDS 67835 69169 . + 0 ID=cds-WP_000219193.1;Parent=gene-AB25_RS11025;Dbxref=GenBank:WP_000219193.1;Name=WP_000219193.1;Ontology_term=GO:0000027,GO:0003724;gbkey=CDS;gene=srmB;go_function=RNA helicase activity|0003724||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311469.1;locus_tag=AB25_RS11025;product=ATP-dependent RNA helicase SrmB;protein_id=WP_000219193.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 69378 70259 . - . ID=gene-AB25_RS11020;Name=yfiE;gbkey=Gene;gene=yfiE;gene_biotype=protein_coding;locus_tag=AB25_RS11020;old_locus_tag=AB25_2954 NZ_JJMC01000048.1 Protein Homology CDS 69378 70259 . - 0 ID=cds-WP_000365855.1;Parent=gene-AB25_RS11020;Dbxref=GenBank:WP_000365855.1;Name=WP_000365855.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=yfiE;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417072.4;locus_tag=AB25_RS11020;product=LysR family transcriptional regulator;protein_id=WP_000365855.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 70362 70949 . + . ID=gene-AB25_RS11015;Name=eamB;gbkey=Gene;gene=eamB;gene_biotype=protein_coding;locus_tag=AB25_RS11015;old_locus_tag=AB25_2955 NZ_JJMC01000048.1 Protein Homology CDS 70362 70949 . + 0 ID=cds-WP_000189203.1;Parent=gene-AB25_RS11015;Dbxref=GenBank:WP_000189203.1;Name=WP_000189203.1;gbkey=CDS;gene=eamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417073.1;locus_tag=AB25_RS11015;product=cysteine/O-acetylserine transporter;protein_id=WP_000189203.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 71005 71388 . - . ID=gene-AB25_RS11010;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=AB25_RS11010;old_locus_tag=AB25_2956 NZ_JJMC01000048.1 Protein Homology CDS 71005 71388 . - 0 ID=cds-WP_000627807.1;Parent=gene-AB25_RS11010;Dbxref=GenBank:WP_000627807.1;Name=WP_000627807.1;Ontology_term=GO:0003824;gbkey=CDS;gene=grcA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1;locus_tag=AB25_RS11010;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_000627807.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 71693 72382 . + . ID=gene-AB25_RS11005;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=AB25_RS11005;old_locus_tag=AB25_2957 NZ_JJMC01000048.1 Protein Homology CDS 71693 72382 . + 0 ID=cds-WP_001262716.1;Parent=gene-AB25_RS11005;Dbxref=GenBank:WP_001262716.1;Name=WP_001262716.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417075.1;locus_tag=AB25_RS11005;product=uracil-DNA glycosylase;protein_id=WP_001262716.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 72430 73467 . - . ID=gene-AB25_RS11000;Name=yfiF;gbkey=Gene;gene=yfiF;gene_biotype=protein_coding;locus_tag=AB25_RS11000;old_locus_tag=AB25_2958 NZ_JJMC01000048.1 Protein Homology CDS 72430 73467 . - 0 ID=cds-WP_000997403.1;Parent=gene-AB25_RS11000;Dbxref=GenBank:WP_000997403.1;Name=WP_000997403.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=yfiF;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311474.1;locus_tag=AB25_RS11000;product=tRNA/rRNA methyltransferase;protein_id=WP_000997403.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 73674 74093 . + . ID=gene-AB25_RS10995;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;locus_tag=AB25_RS10995;old_locus_tag=AB25_2959 NZ_JJMC01000048.1 Protein Homology CDS 73674 74093 . + 0 ID=cds-WP_001098726.1;Parent=gene-AB25_RS10995;Dbxref=GenBank:WP_001098726.1;Name=WP_001098726.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxC;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311475.1;locus_tag=AB25_RS10995;product=thioredoxin TrxC;protein_id=WP_001098726.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 74162 74860 . + . ID=gene-AB25_RS10990;Name=tapT;gbkey=Gene;gene=tapT;gene_biotype=protein_coding;gene_synonym=tuaA,yfiP;locus_tag=AB25_RS10990;old_locus_tag=AB25_2960 NZ_JJMC01000048.1 Protein Homology CDS 74162 74860 . + 0 ID=cds-WP_000138184.1;Parent=gene-AB25_RS10990;Dbxref=GenBank:WP_000138184.1;Name=WP_000138184.1;gbkey=CDS;gene=tapT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311476.2;locus_tag=AB25_RS10990;product=tRNA-uridine aminocarboxypropyltransferase;protein_id=WP_000138184.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 74892 77552 . + . ID=gene-AB25_RS10985;Name=patZ;gbkey=Gene;gene=patZ;gene_biotype=protein_coding;locus_tag=AB25_RS10985;old_locus_tag=AB25_2961 NZ_JJMC01000048.1 Protein Homology CDS 74892 77552 . + 0 ID=cds-WP_000082969.1;Parent=gene-AB25_RS10985;Dbxref=GenBank:WP_000082969.1;Name=WP_000082969.1;gbkey=CDS;gene=patZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417079.1;locus_tag=AB25_RS10985;product=peptidyl-lysine N-acetyltransferase PatZ;protein_id=WP_000082969.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 77666 79021 . + . ID=gene-AB25_RS10980;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=AB25_RS10980;old_locus_tag=AB25_2962 NZ_JJMC01000048.1 Protein Homology CDS 77666 79021 . + 0 ID=cds-WP_000949265.1;Parent=gene-AB25_RS10980;Dbxref=GenBank:WP_000949265.1;Name=WP_000949265.1;Ontology_term=GO:0032049,GO:0008444;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121216.1;locus_tag=AB25_RS10980;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_000949265.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 79067 79390 . + . ID=gene-AB25_RS10975;Name=yfiM;gbkey=Gene;gene=yfiM;gene_biotype=protein_coding;locus_tag=AB25_RS10975;old_locus_tag=AB25_2963 NZ_JJMC01000048.1 Protein Homology CDS 79067 79390 . + 0 ID=cds-WP_071998858.1;Parent=gene-AB25_RS10975;Dbxref=GenBank:WP_071998858.1;Name=WP_071998858.1;gbkey=CDS;gene=yfiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417081.2;locus_tag=AB25_RS10975;product=YfiM family lipoprotein;protein_id=WP_071998858.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 79387 80685 . - . ID=gene-AB25_RS10970;Name=kgtP;gbkey=Gene;gene=kgtP;gene_biotype=protein_coding;locus_tag=AB25_RS10970;old_locus_tag=AB25_2964 NZ_JJMC01000048.1 Protein Homology CDS 79387 80685 . - 0 ID=cds-WP_000841103.1;Parent=gene-AB25_RS10970;Dbxref=GenBank:WP_000841103.1;Name=WP_000841103.1;gbkey=CDS;gene=kgtP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417082.1;locus_tag=AB25_RS10970;product=alpha-ketoglutarate permease;protein_id=WP_000841103.1;transl_table=11 NZ_JJMC01000048.1 RefSeq gene 81011 81126 . - . ID=gene-AB25_RS10965;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AB25_RS10965;old_locus_tag=AB25_2965 NZ_JJMC01000048.1 cmsearch rRNA 81011 81126 . - . ID=rna-AB25_RS10965;Parent=gene-AB25_RS10965;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS10965;product=5S ribosomal RNA NZ_JJMC01000048.1 cmsearch exon 81011 81126 . - . ID=exon-AB25_RS10965-1;Parent=rna-AB25_RS10965;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS10965;product=5S ribosomal RNA ##sequence-region NZ_JJMC01000049.1 1 1456 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000049.1 RefSeq region 1 1456 . + . ID=NZ_JJMC01000049.1:1..1456;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000049.1 RefSeq gene 1 1449 . + . ID=gene-AB25_RS0125785;Name=AB25_RS0125785;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB25_RS0125785;partial=true;start_range=.,1 NZ_JJMC01000049.1 cmsearch rRNA 1 1449 . + . ID=rna-AB25_RS0125785;Parent=gene-AB25_RS0125785;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS0125785;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JJMC01000049.1 cmsearch exon 1 1449 . + . ID=exon-AB25_RS0125785-1;Parent=rna-AB25_RS0125785;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS0125785;partial=true;product=16S ribosomal RNA;start_range=.,1 ##sequence-region NZ_JJMC01000050.1 1 76497 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000050.1 RefSeq region 1 76497 . + . ID=NZ_JJMC01000050.1:1..76497;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000050.1 RefSeq gene 1 182 . - . ID=gene-AB25_RS0125790;Name=AB25_RS0125790;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB25_RS0125790;partial=true;start_range=.,1 NZ_JJMC01000050.1 cmsearch rRNA 1 182 . - . ID=rna-AB25_RS0125790;Parent=gene-AB25_RS0125790;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS0125790;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JJMC01000050.1 cmsearch exon 1 182 . - . ID=exon-AB25_RS0125790-1;Parent=rna-AB25_RS0125790;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS0125790;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JJMC01000050.1 RefSeq gene 625 3198 . - . ID=gene-AB25_RS10960;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=AB25_RS10960;old_locus_tag=AB25_2968 NZ_JJMC01000050.1 Protein Homology CDS 625 3198 . - 0 ID=cds-WP_001235102.1;Parent=gene-AB25_RS10960;Dbxref=GenBank:WP_001235102.1;Name=WP_001235102.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=AB25_RS10960;product=ATP-dependent chaperone ClpB;protein_id=WP_001235102.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 3328 4059 . - . ID=gene-AB25_RS10955;Name=yfiH;gbkey=Gene;gene=yfiH;gene_biotype=protein_coding;locus_tag=AB25_RS10955;old_locus_tag=AB25_2969 NZ_JJMC01000050.1 Protein Homology CDS 3328 4059 . - 0 ID=cds-WP_000040129.1;Parent=gene-AB25_RS10955;Dbxref=GenBank:WP_000040129.1;Name=WP_000040129.1;Ontology_term=GO:0004000,GO:0004731,GO:0042803;gbkey=CDS;gene=yfiH;go_function=adenosine deaminase activity|0004000||IEA,purine-nucleoside phosphorylase activity|0004731||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311483.1;locus_tag=AB25_RS10955;product=purine nucleoside phosphorylase YfiH;protein_id=WP_000040129.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 4056 5036 . - . ID=gene-AB25_RS10950;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=AB25_RS10950;old_locus_tag=AB25_2970 NZ_JJMC01000050.1 Protein Homology CDS 4056 5036 . - 0 ID=cds-WP_000079100.1;Parent=gene-AB25_RS10950;Dbxref=GenBank:WP_000079100.1;Name=WP_000079100.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383977.1;locus_tag=AB25_RS10950;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_000079100.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 5171 5908 . + . ID=gene-AB25_RS10945;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=AB25_RS10945;old_locus_tag=AB25_2971 NZ_JJMC01000050.1 Protein Homology CDS 5171 5908 . + 0 ID=cds-WP_000197686.1;Parent=gene-AB25_RS10945;Dbxref=GenBank:WP_000197686.1;Name=WP_000197686.1;gbkey=CDS;gene=bamD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311485.1;locus_tag=AB25_RS10945;product=outer membrane protein assembly factor BamD;protein_id=WP_000197686.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 6179 6520 . + . ID=gene-AB25_RS10940;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=AB25_RS10940;old_locus_tag=AB25_2972 NZ_JJMC01000050.1 Protein Homology CDS 6179 6520 . + 0 ID=cds-WP_000178456.1;Parent=gene-AB25_RS10940;Dbxref=GenBank:WP_000178456.1;Name=WP_000178456.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311487.1;locus_tag=AB25_RS10940;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_000178456.1;transl_table=11 NZ_JJMC01000050.1 cmsearch sequence_feature 6623 6748 . + . ID=id-NZ_JJMC01000050.1:6623..6748;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JJMC01000050.1 RefSeq gene 6624 6671 . + . ID=gene-AB25_RS31225;Name=pheL;gbkey=Gene;gene=pheL;gene_biotype=protein_coding;locus_tag=AB25_RS31225 NZ_JJMC01000050.1 Protein Homology CDS 6624 6671 . + 0 ID=cds-WP_113706174.1;Parent=gene-AB25_RS31225;Dbxref=GenBank:WP_113706174.1;Name=WP_113706174.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449055.1;locus_tag=AB25_RS31225;product=pheA operon leader peptide PheL;protein_id=WP_113706174.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 6770 7930 . + . ID=gene-AB25_RS10935;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=AB25_RS10935;old_locus_tag=AB25_2973 NZ_JJMC01000050.1 Protein Homology CDS 6770 7930 . + 0 ID=cds-WP_000200101.1;Parent=gene-AB25_RS10935;Dbxref=GenBank:WP_000200101.1;Name=WP_000200101.1;Ontology_term=GO:0009094,GO:0046417,GO:0004106,GO:0004664;gbkey=CDS;gene=pheA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311489.1;locus_tag=AB25_RS10935;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=WP_000200101.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 7973 9094 . - . ID=gene-AB25_RS10930;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=AB25_RS10930;old_locus_tag=AB25_2974 NZ_JJMC01000050.1 Protein Homology CDS 7973 9094 . - 0 ID=cds-WP_000225221.1;Parent=gene-AB25_RS10930;Dbxref=GenBank:WP_000225221.1;Name=WP_000225221.1;Ontology_term=GO:0006571,GO:0046417,GO:0004106,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311490.1;locus_tag=AB25_RS10930;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=WP_000225221.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 9105 10175 . - . ID=gene-AB25_RS10925;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;locus_tag=AB25_RS10925;old_locus_tag=AB25_2975 NZ_JJMC01000050.1 Protein Homology CDS 9105 10175 . - 0 ID=cds-WP_001168045.1;Parent=gene-AB25_RS10925;Dbxref=GenBank:WP_001168045.1;Name=WP_001168045.1;gbkey=CDS;gene=aroF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311491.1;locus_tag=AB25_RS10925;product=3-deoxy-7-phosphoheptulonate synthase AroF;protein_id=WP_001168045.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 10385 10750 . + . ID=gene-AB25_RS10920;Name=yfiL;gbkey=Gene;gene=yfiL;gene_biotype=protein_coding;locus_tag=AB25_RS10920;old_locus_tag=AB25_2976 NZ_JJMC01000050.1 Protein Homology CDS 10385 10750 . + 0 ID=cds-WP_000976004.1;Parent=gene-AB25_RS10920;Dbxref=GenBank:WP_000976004.1;Name=WP_000976004.1;gbkey=CDS;gene=yfiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417093.2;locus_tag=AB25_RS10920;product=DUF2799 domain-containing protein;protein_id=WP_000976004.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 10900 11418 . + . ID=gene-AB25_RS10915;Name=yfiR;gbkey=Gene;gene=yfiR;gene_biotype=protein_coding;locus_tag=AB25_RS10915;old_locus_tag=AB25_2977 NZ_JJMC01000050.1 Protein Homology CDS 10900 11418 . + 0 ID=cds-WP_001212391.1;Parent=gene-AB25_RS10915;Dbxref=GenBank:WP_001212391.1;Name=WP_001212391.1;gbkey=CDS;gene=yfiR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311493.1;locus_tag=AB25_RS10915;product=YfiR family protein;protein_id=WP_001212391.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 11510 12634 . + . ID=gene-AB25_RS10910;Name=dgcN;gbkey=Gene;gene=dgcN;gene_biotype=protein_coding;locus_tag=AB25_RS10910;old_locus_tag=AB25_2978 NZ_JJMC01000050.1 Protein Homology CDS 11510 12634 . + 0 ID=cds-WP_249402585.1;Parent=gene-AB25_RS10910;Dbxref=GenBank:WP_249402585.1;Name=WP_249402585.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;gene=dgcN;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001342917.1;locus_tag=AB25_RS10910;product=diguanylate cyclase DgcN;protein_id=WP_249402585.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 12650 13132 . + . ID=gene-AB25_RS10905;Name=yfiB;gbkey=Gene;gene=yfiB;gene_biotype=protein_coding;locus_tag=AB25_RS10905;old_locus_tag=AB25_2979 NZ_JJMC01000050.1 Protein Homology CDS 12650 13132 . + 0 ID=cds-WP_000589828.1;Parent=gene-AB25_RS10905;Dbxref=GenBank:WP_000589828.1;Name=WP_000589828.1;gbkey=CDS;gene=yfiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311495.1;locus_tag=AB25_RS10905;product=OmpA family protein;protein_id=WP_000589828.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 13208 13555 . - . ID=gene-AB25_RS10900;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=AB25_RS10900;old_locus_tag=AB25_2980 NZ_JJMC01000050.1 Protein Homology CDS 13208 13555 . - 0 ID=cds-WP_000065253.1;Parent=gene-AB25_RS10900;Dbxref=GenBank:WP_000065253.1;Name=WP_000065253.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012768745.1;locus_tag=AB25_RS10900;product=50S ribosomal protein L19;protein_id=WP_000065253.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 13597 14364 . - . ID=gene-AB25_RS10895;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=AB25_RS10895;old_locus_tag=AB25_2981 NZ_JJMC01000050.1 Protein Homology CDS 13597 14364 . - 0 ID=cds-WP_000264777.1;Parent=gene-AB25_RS10895;Dbxref=GenBank:WP_000264777.1;Name=WP_000264777.1;Ontology_term=GO:0030488,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311497.1;locus_tag=AB25_RS10895;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_000264777.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 14395 14943 . - . ID=gene-AB25_RS10890;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=AB25_RS10890;old_locus_tag=AB25_2982 NZ_JJMC01000050.1 Protein Homology CDS 14395 14943 . - 0 ID=cds-WP_000043335.1;Parent=gene-AB25_RS10890;Dbxref=GenBank:WP_000043335.1;Name=WP_000043335.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043333.1;locus_tag=AB25_RS10890;product=ribosome maturation factor RimM;protein_id=WP_000043335.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 14962 15210 . - . ID=gene-AB25_RS10885;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=AB25_RS10885;old_locus_tag=AB25_2983 NZ_JJMC01000050.1 Protein Homology CDS 14962 15210 . - 0 ID=cds-WP_000256450.1;Parent=gene-AB25_RS10885;Dbxref=GenBank:WP_000256450.1;Name=WP_000256450.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000256453.1;locus_tag=AB25_RS10885;product=30S ribosomal protein S16;protein_id=WP_000256450.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 15347 16708 . - . ID=gene-AB25_RS10880;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=AB25_RS10880;old_locus_tag=AB25_2984 NZ_JJMC01000050.1 Protein Homology CDS 15347 16708 . - 0 ID=cds-WP_000460035.1;Parent=gene-AB25_RS10880;Dbxref=GenBank:WP_000460035.1;Name=WP_000460035.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=AB25_RS10880;product=signal recognition particle protein;protein_id=WP_000460035.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 16875 17666 . + . ID=gene-AB25_RS10875;Name=ypjD;gbkey=Gene;gene=ypjD;gene_biotype=protein_coding;locus_tag=AB25_RS10875;old_locus_tag=AB25_2985 NZ_JJMC01000050.1 Protein Homology CDS 16875 17666 . + 0 ID=cds-WP_001338897.1;Parent=gene-AB25_RS10875;Dbxref=GenBank:WP_001338897.1;Name=WP_001338897.1;Ontology_term=GO:0005886;gbkey=CDS;gene=ypjD;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417102.4;locus_tag=AB25_RS10875;product=cytochrome C assembly family protein;protein_id=WP_001338897.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 17687 18973 . + . ID=gene-AB25_RS10870;Name=yfjD;gbkey=Gene;gene=yfjD;gene_biotype=protein_coding;locus_tag=AB25_RS10870;old_locus_tag=AB25_2986 NZ_JJMC01000050.1 Protein Homology CDS 17687 18973 . + 0 ID=cds-WP_077754689.1;Parent=gene-AB25_RS10870;Dbxref=GenBank:WP_077754689.1;Name=WP_077754689.1;gbkey=CDS;gene=yfjD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026171.3;locus_tag=AB25_RS10870;product=HlyC/CorC family transporter;protein_id=WP_077754689.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 19028 19621 . - . ID=gene-AB25_RS10865;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=AB25_RS10865;old_locus_tag=AB25_2987 NZ_JJMC01000050.1 Protein Homology CDS 19028 19621 . - 0 ID=cds-WP_001296310.1;Parent=gene-AB25_RS10865;Dbxref=GenBank:WP_001296310.1;Name=WP_001296310.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311503.1;locus_tag=AB25_RS10865;product=nucleotide exchange factor GrpE;protein_id=WP_001296310.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 19744 20622 . + . ID=gene-AB25_RS10855;Name=nadK;gbkey=Gene;gene=nadK;gene_biotype=protein_coding;locus_tag=AB25_RS10855;old_locus_tag=AB25_2989 NZ_JJMC01000050.1 Protein Homology CDS 19744 20622 . + 0 ID=cds-WP_001059169.1;Parent=gene-AB25_RS10855;Dbxref=GenBank:WP_001059169.1;Name=WP_001059169.1;Ontology_term=GO:0003951;gbkey=CDS;gene=nadK;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239499.1;locus_tag=AB25_RS10855;product=NAD(+) kinase;protein_id=WP_001059169.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 20708 22369 . + . ID=gene-AB25_RS10850;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=AB25_RS10850;old_locus_tag=AB25_2990 NZ_JJMC01000050.1 Protein Homology CDS 20708 22369 . + 0 ID=cds-WP_000880910.1;Parent=gene-AB25_RS10850;Dbxref=GenBank:WP_000880910.1;Name=WP_000880910.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026172.1;locus_tag=AB25_RS10850;product=DNA repair protein RecN;protein_id=WP_000880910.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 22518 22859 . + . ID=gene-AB25_RS10845;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=AB25_RS10845;old_locus_tag=AB25_2991 NZ_JJMC01000050.1 Protein Homology CDS 22518 22859 . + 0 ID=cds-WP_001203437.1;Parent=gene-AB25_RS10845;Dbxref=GenBank:WP_001203437.1;Name=WP_001203437.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417107.2;locus_tag=AB25_RS10845;product=outer membrane protein assembly factor BamE;protein_id=WP_001203437.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 22921 23211 . - . ID=gene-AB25_RS10840;Name=yfjF;gbkey=Gene;gene=yfjF;gene_biotype=protein_coding;locus_tag=AB25_RS10840;old_locus_tag=AB25_2992 NZ_JJMC01000050.1 Protein Homology CDS 22921 23211 . - 0 ID=cds-WP_001117838.1;Parent=gene-AB25_RS10840;Dbxref=GenBank:WP_001117838.1;Name=WP_001117838.1;gbkey=CDS;gene=yfjF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417108.4;locus_tag=AB25_RS10840;product=RnfH family protein;protein_id=WP_001117838.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 23201 23638 . - . ID=gene-AB25_RS10835;Name=ratA;gbkey=Gene;gene=ratA;gene_biotype=protein_coding;locus_tag=AB25_RS10835;old_locus_tag=AB25_2993 NZ_JJMC01000050.1 Protein Homology CDS 23201 23638 . - 0 ID=cds-WP_001300750.1;Parent=gene-AB25_RS10835;Dbxref=GenBank:WP_001300750.1;Name=WP_001300750.1;gbkey=CDS;gene=ratA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010376629.1;locus_tag=AB25_RS10835;product=type II toxin-antitoxin system toxin RatA;protein_id=WP_001300750.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 23809 24291 . + . ID=gene-AB25_RS10830;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=AB25_RS10830;old_locus_tag=AB25_2994 NZ_JJMC01000050.1 Protein Homology CDS 23809 24291 . + 0 ID=cds-WP_000162574.1;Parent=gene-AB25_RS10830;Dbxref=GenBank:WP_000162574.1;Name=WP_000162574.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311509.1;locus_tag=AB25_RS10830;product=SsrA-binding protein SmpB;protein_id=WP_000162574.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 24506 24868 . + . ID=gene-AB25_RS27375;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=AB25_RS27375 NZ_JJMC01000050.1 cmsearch tmRNA 24506 24868 . + . ID=rna-AB25_RS27375;Parent=gene-AB25_RS27375;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS27375;product=transfer-messenger RNA NZ_JJMC01000050.1 cmsearch exon 24506 24868 . + . ID=exon-AB25_RS27375-1;Parent=rna-AB25_RS27375;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS27375;product=transfer-messenger RNA NZ_JJMC01000050.1 RefSeq gene 25035 26264 . + . ID=gene-AB25_RS10825;Name=AB25_RS10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS10825;old_locus_tag=AB25_2995 NZ_JJMC01000050.1 Protein Homology CDS 25035 26264 . + 0 ID=cds-WP_001062342.1;Parent=gene-AB25_RS10825;Dbxref=GenBank:WP_001062342.1;Name=WP_001062342.1;Ontology_term=GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001341819.1;locus_tag=AB25_RS10825;product=integrase domain-containing protein;protein_id=WP_001062342.1;transl_table=11 NZ_JJMC01000050.1 RefSeq pseudogene 26547 28103 . + . ID=gene-AB25_RS0125800;Name=AB25_RS0125800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS0125800;pseudo=true NZ_JJMC01000050.1 Protein Homology CDS 26547 28103 . + 0 ID=cds-AB25_RS0125800;Parent=gene-AB25_RS0125800;Note=internal stop;Ontology_term=GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000135616.1;locus_tag=AB25_RS0125800;product=recombinase family protein;pseudo=true;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 28093 28989 . + . ID=gene-AB25_RS10820;Name=AB25_RS10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS10820;old_locus_tag=AB25_2998 NZ_JJMC01000050.1 Protein Homology CDS 28093 28989 . + 0 ID=cds-WP_000936465.1;Parent=gene-AB25_RS10820;Dbxref=GenBank:WP_000936465.1;Name=WP_000936465.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000936491.1;locus_tag=AB25_RS10820;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_000936465.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 28986 29882 . + . ID=gene-AB25_RS10815;Name=AB25_RS10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS10815;old_locus_tag=AB25_2999 NZ_JJMC01000050.1 Protein Homology CDS 28986 29882 . + 0 ID=cds-WP_000614783.1;Parent=gene-AB25_RS10815;Dbxref=GenBank:WP_000614783.1;Name=WP_000614783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008502509.1;locus_tag=AB25_RS10815;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_000614783.1;transl_table=11 NZ_JJMC01000050.1 RefSeq pseudogene 30998 31267 . - . ID=gene-AB25_RS30475;Name=AB25_RS30475;end_range=31267,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS30475;partial=true;pseudo=true NZ_JJMC01000050.1 Protein Homology CDS 30998 31267 . - 0 ID=cds-AB25_RS30475;Parent=gene-AB25_RS30475;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=31267,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611293.1;locus_tag=AB25_RS30475;partial=true;product=integrase core domain-containing protein;pseudo=true;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 31479 33026 . + . ID=gene-AB25_RS10810;Name=AB25_RS10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS10810;old_locus_tag=AB25_3000 NZ_JJMC01000050.1 Protein Homology CDS 31479 33026 . + 0 ID=cds-WP_000101606.1;Parent=gene-AB25_RS10810;Dbxref=GenBank:WP_000101606.1;Name=WP_000101606.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000101605.1;locus_tag=AB25_RS10810;product=type I restriction-modification system subunit M;protein_id=WP_000101606.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 33023 33220 . + . ID=gene-AB25_RS32715;Name=AB25_RS32715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32715 NZ_JJMC01000050.1 Protein Homology CDS 33023 33220 . + 0 ID=cds-WP_251982093.1;Parent=gene-AB25_RS32715;Dbxref=GenBank:WP_251982093.1;Name=WP_251982093.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: protein motif:HMM:NF013579.6;locus_tag=AB25_RS32715;product=restriction endonuclease subunit S;protein_id=WP_251982093.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 33238 34215 . + . ID=gene-AB25_RS0125805;Name=AB25_RS0125805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0125805;old_locus_tag=AB25_3002 NZ_JJMC01000050.1 Protein Homology CDS 33238 34215 . + 0 ID=cds-WP_251982094.1;Parent=gene-AB25_RS0125805;Dbxref=GenBank:WP_251982094.1;Name=WP_251982094.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: protein motif:HMM:NF013579.6;locus_tag=AB25_RS0125805;product=restriction endonuclease subunit S;protein_id=WP_251982094.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 34274 37513 . + . ID=gene-AB25_RS10805;Name=AB25_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS10805;old_locus_tag=AB25_3003 NZ_JJMC01000050.1 Protein Homology CDS 34274 37513 . + 0 ID=cds-WP_001096907.1;Parent=gene-AB25_RS10805;Dbxref=GenBank:WP_001096907.1;Name=WP_001096907.1;Ontology_term=GO:0009307,GO:0003677,GO:0004386,GO:0005524,GO:0009035,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,type I site-specific deoxyribonuclease activity|0009035||IEA,ATP hydrolysis activity|0016887||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001679315.1;locus_tag=AB25_RS10805;product=type I restriction endonuclease subunit R;protein_id=WP_001096907.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 37559 38223 . - . ID=gene-AB25_RS30480;Name=AB25_RS30480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS30480 NZ_JJMC01000050.1 Protein Homology CDS 38007 38223 . - 0 ID=cds-WP_223349789.1;Parent=gene-AB25_RS30480;Dbxref=GenBank:WP_223349789.1;Name=WP_223349789.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB25_RS30480;product=IS1 family transposase;protein_id=WP_223349789.1;transl_table=11 NZ_JJMC01000050.1 Protein Homology CDS 37559 38007 . - 2 ID=cds-WP_223349789.1;Parent=gene-AB25_RS30480;Dbxref=GenBank:WP_223349789.1;Name=WP_223349789.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB25_RS30480;product=IS1 family transposase;protein_id=WP_223349789.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 38743 39645 . + . ID=gene-AB25_RS10795;Name=AB25_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS10795;old_locus_tag=AB25_3005 NZ_JJMC01000050.1 Protein Homology CDS 38743 39645 . + 0 ID=cds-WP_024169466.1;Parent=gene-AB25_RS10795;Dbxref=GenBank:WP_024169466.1;Name=WP_024169466.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001356251.1;locus_tag=AB25_RS10795;product=ankyrin repeat domain-containing protein;protein_id=WP_024169466.1;transl_table=11 NZ_JJMC01000050.1 RefSeq pseudogene 39741 41993 . + . ID=gene-AB25_RS10790;Name=AB25_RS10790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS10790;old_locus_tag=AB25_3006;pseudo=true NZ_JJMC01000050.1 Protein Homology CDS 39741 41993 . + 0 ID=cds-AB25_RS10790;Parent=gene-AB25_RS10790;Note=internal stop;Ontology_term=GO:0005975,GO:0003824,GO:0043169;gbkey=CDS;go_function=catalytic activity|0003824||IEA,cation binding|0043169||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439272.1;locus_tag=AB25_RS10790;product=alpha amylase C-terminal domain-containing protein;pseudo=true;transl_table=11 NZ_JJMC01000050.1 RefSeq pseudogene 42329 43306 . + . ID=gene-AB25_RS10785;Name=glaH;gbkey=Gene;gene=glaH;gene_biotype=pseudogene;locus_tag=AB25_RS10785;old_locus_tag=AB25_3008;pseudo=true NZ_JJMC01000050.1 Protein Homology CDS 42329 43306 . + 0 ID=cds-AB25_RS10785;Parent=gene-AB25_RS10785;Note=internal stop;Ontology_term=GO:0050498;gbkey=CDS;gene=glaH;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C with 2-oxoglutarate as one donor%2C and the other dehydrogenated|0050498||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311547.2;locus_tag=AB25_RS10785;product=glutarate dioxygenase GlaH;pseudo=true;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 43326 44594 . + . ID=gene-AB25_RS10780;Name=lhgO;gbkey=Gene;gene=lhgO;gene_biotype=protein_coding;locus_tag=AB25_RS10780;old_locus_tag=AB25_3009 NZ_JJMC01000050.1 Protein Homology CDS 43326 44594 . + 0 ID=cds-WP_001392560.1;Parent=gene-AB25_RS10780;Dbxref=GenBank:WP_001392560.1;Name=WP_001392560.1;Ontology_term=GO:0016491;gbkey=CDS;gene=lhgO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311548.2;locus_tag=AB25_RS10780;product=L-2-hydroxyglutarate oxidase;protein_id=WP_001392560.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 44617 46065 . + . ID=gene-AB25_RS10775;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=AB25_RS10775;old_locus_tag=AB25_3010 NZ_JJMC01000050.1 Protein Homology CDS 44617 46065 . + 0 ID=cds-WP_032173519.1;Parent=gene-AB25_RS10775;Dbxref=GenBank:WP_032173519.1;Name=WP_032173519.1;Ontology_term=GO:0009450,GO:0009013;gbkey=CDS;gene=gabD;go_function=succinate-semialdehyde dehydrogenase [NAD(P)+] activity|0009013||IEA;go_process=gamma-aminobutyric acid catabolic process|0009450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311549.1;locus_tag=AB25_RS10775;product=NADP-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_032173519.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 46079 47359 . + . ID=gene-AB25_RS10770;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=protein_coding;locus_tag=AB25_RS10770;old_locus_tag=AB25_3011 NZ_JJMC01000050.1 Protein Homology CDS 46079 47359 . + 0 ID=cds-WP_032173520.1;Parent=gene-AB25_RS10770;Dbxref=GenBank:WP_032173520.1;Name=WP_032173520.1;Ontology_term=GO:0009448,GO:0030170;gbkey=CDS;gene=gabT;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311550.1;locus_tag=AB25_RS10770;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=WP_032173520.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 47597 48997 . + . ID=gene-AB25_RS10765;Name=gabP;gbkey=Gene;gene=gabP;gene_biotype=protein_coding;locus_tag=AB25_RS10765;old_locus_tag=AB25_3012 NZ_JJMC01000050.1 Protein Homology CDS 47597 48997 . + 0 ID=cds-WP_032171141.1;Parent=gene-AB25_RS10765;Dbxref=GenBank:WP_032171141.1;Name=WP_032171141.1;Ontology_term=GO:0006865,GO:0015185,GO:0016020;gbkey=CDS;gene=gabP;go_component=membrane|0016020||IEA;go_function=gamma-aminobutyric acid transmembrane transporter activity|0015185||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417149.1;locus_tag=AB25_RS10765;product=GABA permease;protein_id=WP_032171141.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 49018 49680 . + . ID=gene-AB25_RS10760;Name=csiR;gbkey=Gene;gene=csiR;gene_biotype=protein_coding;locus_tag=AB25_RS10760;old_locus_tag=AB25_3013 NZ_JJMC01000050.1 Protein Homology CDS 49018 49680 . + 0 ID=cds-WP_000156811.1;Parent=gene-AB25_RS10760;Dbxref=GenBank:WP_000156811.1;Name=WP_000156811.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=csiR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311552.2;locus_tag=AB25_RS10760;product=DNA-binding transcriptional regulator CsiR;protein_id=WP_000156811.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 49681 50130 . - . ID=gene-AB25_RS10755;Name=kbp;gbkey=Gene;gene=kbp;gene_biotype=protein_coding;locus_tag=AB25_RS10755;old_locus_tag=AB25_3014 NZ_JJMC01000050.1 Protein Homology CDS 49681 50130 . - 0 ID=cds-WP_000522415.1;Parent=gene-AB25_RS10755;Dbxref=GenBank:WP_000522415.1;Name=WP_000522415.1;gbkey=CDS;gene=kbp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417151.1;locus_tag=AB25_RS10755;product=potassium binding protein Kbp;protein_id=WP_000522415.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 50214 50372 . - . ID=gene-AB25_RS10750;Name=yqaE;gbkey=Gene;gene=yqaE;gene_biotype=protein_coding;locus_tag=AB25_RS10750;old_locus_tag=AB25_3015 NZ_JJMC01000050.1 Protein Homology CDS 50214 50372 . - 0 ID=cds-WP_000508177.1;Parent=gene-AB25_RS10750;Dbxref=GenBank:WP_000508177.1;Name=WP_000508177.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yqaE;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311554.1;locus_tag=AB25_RS10750;product=YqaE/Pmp3 family membrane protein;protein_id=WP_000508177.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 50555 50854 . + . ID=gene-AB25_RS10745;Name=ygaV;gbkey=Gene;gene=ygaV;gene_biotype=protein_coding;locus_tag=AB25_RS10745;old_locus_tag=AB25_3016 NZ_JJMC01000050.1 Protein Homology CDS 50555 50854 . + 0 ID=cds-WP_000137280.1;Parent=gene-AB25_RS10745;Dbxref=GenBank:WP_000137280.1;Name=WP_000137280.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=ygaV;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417153.1;locus_tag=AB25_RS10745;product=ArsR/SmtB family transcription factor;protein_id=WP_000137280.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 50864 51388 . + . ID=gene-AB25_RS10740;Name=ygaP;gbkey=Gene;gene=ygaP;gene_biotype=protein_coding;locus_tag=AB25_RS10740;old_locus_tag=AB25_3017 NZ_JJMC01000050.1 Protein Homology CDS 50864 51388 . + 0 ID=cds-WP_001229444.1;Parent=gene-AB25_RS10740;Dbxref=GenBank:WP_001229444.1;Name=WP_001229444.1;gbkey=CDS;gene=ygaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417154.1;locus_tag=AB25_RS10740;product=thiosulfate sulfurtransferase YgaP;protein_id=WP_001229444.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 51435 51839 . - . ID=gene-AB25_RS10735;Name=stpA;gbkey=Gene;gene=stpA;gene_biotype=protein_coding;locus_tag=AB25_RS10735;old_locus_tag=AB25_3018 NZ_JJMC01000050.1 Protein Homology CDS 51435 51839 . - 0 ID=cds-WP_000115383.1;Parent=gene-AB25_RS10735;Dbxref=GenBank:WP_000115383.1;Name=WP_000115383.1;gbkey=CDS;gene=stpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311557.1;locus_tag=AB25_RS10735;product=DNA-binding protein StpA;protein_id=WP_000115383.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 52507 52956 . + . ID=gene-AB25_RS10730;Name=alaE;gbkey=Gene;gene=alaE;gene_biotype=protein_coding;locus_tag=AB25_RS10730;old_locus_tag=AB25_3019 NZ_JJMC01000050.1 Protein Homology CDS 52507 52956 . + 0 ID=cds-WP_000492656.1;Parent=gene-AB25_RS10730;Dbxref=GenBank:WP_000492656.1;Name=WP_000492656.1;gbkey=CDS;gene=alaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311558.1;locus_tag=AB25_RS10730;product=L-alanine exporter AlaE;protein_id=WP_000492656.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 52993 53337 . - . ID=gene-AB25_RS10725;Name=ygaC;gbkey=Gene;gene=ygaC;gene_biotype=protein_coding;locus_tag=AB25_RS10725;old_locus_tag=AB25_3020 NZ_JJMC01000050.1 Protein Homology CDS 52993 53337 . - 0 ID=cds-WP_000281320.1;Parent=gene-AB25_RS10725;Dbxref=GenBank:WP_000281320.1;Name=WP_000281320.1;gbkey=CDS;gene=ygaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311559.1;locus_tag=AB25_RS10725;product=DUF2002 family protein;protein_id=WP_000281320.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 53489 53818 . + . ID=gene-AB25_RS10720;Name=ygaM;gbkey=Gene;gene=ygaM;gene_biotype=protein_coding;locus_tag=AB25_RS10720;old_locus_tag=AB25_3021 NZ_JJMC01000050.1 Protein Homology CDS 53489 53818 . + 0 ID=cds-WP_001295174.1;Parent=gene-AB25_RS10720;Dbxref=GenBank:WP_001295174.1;Name=WP_001295174.1;gbkey=CDS;gene=ygaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311560.2;locus_tag=AB25_RS10720;product=DUF883 domain-containing protein;protein_id=WP_001295174.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 54066 54311 . + . ID=gene-AB25_RS10715;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=AB25_RS10715;old_locus_tag=AB25_3022 NZ_JJMC01000050.1 Protein Homology CDS 54066 54311 . + 0 ID=cds-WP_001223227.1;Parent=gene-AB25_RS10715;Dbxref=GenBank:WP_001223227.1;Name=WP_001223227.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311563.1;locus_tag=AB25_RS10715;product=glutaredoxin-like protein NrdH;protein_id=WP_001223227.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 54308 54718 . + . ID=gene-AB25_RS10710;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=AB25_RS10710;old_locus_tag=AB25_3023 NZ_JJMC01000050.1 Protein Homology CDS 54308 54718 . + 0 ID=cds-WP_000080947.1;Parent=gene-AB25_RS10710;Dbxref=GenBank:WP_000080947.1;Name=WP_000080947.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311564.1;locus_tag=AB25_RS10710;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_000080947.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 54691 56835 . + . ID=gene-AB25_RS10705;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=AB25_RS10705;old_locus_tag=AB25_3024 NZ_JJMC01000050.1 Protein Homology CDS 54691 56835 . + 0 ID=cds-WP_000246517.1;Parent=gene-AB25_RS10705;Dbxref=GenBank:WP_000246517.1;Name=WP_000246517.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417161.1;locus_tag=AB25_RS10705;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_000246517.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 56845 57804 . + . ID=gene-AB25_RS10700;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=AB25_RS10700;old_locus_tag=AB25_3025 NZ_JJMC01000050.1 Protein Homology CDS 56845 57804 . + 0 ID=cds-WP_000777965.1;Parent=gene-AB25_RS10700;Dbxref=GenBank:WP_000777965.1;Name=WP_000777965.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417162.1;locus_tag=AB25_RS10700;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000777965.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 58159 59361 . + . ID=gene-AB25_RS10695;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=AB25_RS10695;old_locus_tag=AB25_3026 NZ_JJMC01000050.1 Protein Homology CDS 58159 59361 . + 0 ID=cds-WP_000985494.1;Parent=gene-AB25_RS10695;Dbxref=GenBank:WP_000985494.1;Name=WP_000985494.1;Ontology_term=GO:0031460,GO:0005524;gbkey=CDS;gene=proV;go_function=ATP binding|0005524||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417163.1;locus_tag=AB25_RS10695;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=WP_000985494.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 59354 60418 . + . ID=gene-AB25_RS10690;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=AB25_RS10690;old_locus_tag=AB25_3027 NZ_JJMC01000050.1 Protein Homology CDS 59354 60418 . + 0 ID=cds-WP_000774978.1;Parent=gene-AB25_RS10690;Dbxref=GenBank:WP_000774978.1;Name=WP_000774978.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=proW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311568.1;locus_tag=AB25_RS10690;product=glycine betaine/L-proline ABC transporter permease ProW;protein_id=WP_000774978.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 60476 61468 . + . ID=gene-AB25_RS10685;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=AB25_RS10685;old_locus_tag=AB25_3028 NZ_JJMC01000050.1 Protein Homology CDS 60476 61468 . + 0 ID=cds-WP_001216521.1;Parent=gene-AB25_RS10685;Dbxref=GenBank:WP_001216521.1;Name=WP_001216521.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;gene=proX;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311569.1;locus_tag=AB25_RS10685;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;protein_id=WP_001216521.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 61760 62944 . + . ID=gene-AB25_RS10680;Name=AB25_RS10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS10680;old_locus_tag=AB25_3030 NZ_JJMC01000050.1 Protein Homology CDS 61760 62944 . + 0 ID=cds-WP_000165699.1;Parent=gene-AB25_RS10680;Dbxref=GenBank:WP_000165699.1;Name=WP_000165699.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311570.1;locus_tag=AB25_RS10680;product=MFS transporter;protein_id=WP_000165699.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 63068 63805 . + . ID=gene-AB25_RS10675;Name=ygaZ;gbkey=Gene;gene=ygaZ;gene_biotype=protein_coding;locus_tag=AB25_RS10675;old_locus_tag=AB25_3031 NZ_JJMC01000050.1 Protein Homology CDS 63068 63805 . + 0 ID=cds-WP_000445658.1;Parent=gene-AB25_RS10675;Dbxref=GenBank:WP_000445658.1;Name=WP_000445658.1;gbkey=CDS;gene=ygaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311571.1;locus_tag=AB25_RS10675;product=L-valine exporter subunit YgaZ;protein_id=WP_000445658.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 63795 64130 . + . ID=gene-AB25_RS10670;Name=ygaH;gbkey=Gene;gene=ygaH;gene_biotype=protein_coding;locus_tag=AB25_RS10670;old_locus_tag=AB25_3032 NZ_JJMC01000050.1 Protein Homology CDS 63795 64130 . + 0 ID=cds-WP_000119750.1;Parent=gene-AB25_RS10670;Dbxref=GenBank:WP_000119750.1;Name=WP_000119750.1;gbkey=CDS;gene=ygaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311572.1;locus_tag=AB25_RS10670;product=L-valine transporter subunit YgaH;protein_id=WP_000119750.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 64221 64751 . + . ID=gene-AB25_RS10665;Name=emrR;gbkey=Gene;gene=emrR;gene_biotype=protein_coding;locus_tag=AB25_RS10665;old_locus_tag=AB25_3033 NZ_JJMC01000050.1 Protein Homology CDS 64221 64751 . + 0 ID=cds-WP_000378442.1;Parent=gene-AB25_RS10665;Dbxref=GenBank:WP_000378442.1;Name=WP_000378442.1;gbkey=CDS;gene=emrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311573.1;locus_tag=AB25_RS10665;product=multidrug efflux transporter EmrAB transcriptional repressor EmrR;protein_id=WP_000378442.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 64878 66050 . + . ID=gene-AB25_RS10660;Name=emrA;gbkey=Gene;gene=emrA;gene_biotype=protein_coding;locus_tag=AB25_RS10660;old_locus_tag=AB25_3035 NZ_JJMC01000050.1 Protein Homology CDS 64878 66050 . + 0 ID=cds-WP_001295175.1;Parent=gene-AB25_RS10660;Dbxref=GenBank:WP_001295175.1;Name=WP_001295175.1;gbkey=CDS;gene=emrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311574.1;locus_tag=AB25_RS10660;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;protein_id=WP_001295175.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 66067 67605 . + . ID=gene-AB25_RS10655;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=AB25_RS10655;old_locus_tag=AB25_3036 NZ_JJMC01000050.1 Protein Homology CDS 66067 67605 . + 0 ID=cds-WP_001295176.1;Parent=gene-AB25_RS10655;Dbxref=GenBank:WP_001295176.1;Name=WP_001295176.1;gbkey=CDS;gene=emrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311575.1;locus_tag=AB25_RS10655;product=multidrug efflux MFS transporter permease subunit EmrB;protein_id=WP_001295176.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 67669 68184 . - . ID=gene-AB25_RS10650;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=AB25_RS10650;old_locus_tag=AB25_3037 NZ_JJMC01000050.1 Protein Homology CDS 67669 68184 . - 0 ID=cds-WP_001130207.1;Parent=gene-AB25_RS10650;Dbxref=GenBank:WP_001130207.1;Name=WP_001130207.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458247.1;locus_tag=AB25_RS10650;product=S-ribosylhomocysteine lyase;protein_id=WP_001130207.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 68334 69890 . - . ID=gene-AB25_RS10645;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=AB25_RS10645;old_locus_tag=AB25_3038 NZ_JJMC01000050.1 Protein Homology CDS 68334 69890 . - 0 ID=cds-WP_000611802.1;Parent=gene-AB25_RS10645;Dbxref=GenBank:WP_000611802.1;Name=WP_000611802.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417173.1;locus_tag=AB25_RS10645;product=glutamate--cysteine ligase;protein_id=WP_000611802.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 69963 70391 . - . ID=gene-AB25_RS10640;Name=yqaA;gbkey=Gene;gene=yqaA;gene_biotype=protein_coding;locus_tag=AB25_RS10640;old_locus_tag=AB25_3039 NZ_JJMC01000050.1 Protein Homology CDS 69963 70391 . - 0 ID=cds-WP_001287457.1;Parent=gene-AB25_RS10640;Dbxref=GenBank:WP_001287457.1;Name=WP_001287457.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yqaA;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417174.1;locus_tag=AB25_RS10640;product=YqaA family protein;protein_id=WP_001287457.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 70388 70954 . - . ID=gene-AB25_RS10635;Name=yqaB;gbkey=Gene;gene=yqaB;gene_biotype=protein_coding;locus_tag=AB25_RS10635;old_locus_tag=AB25_3040 NZ_JJMC01000050.1 Protein Homology CDS 70388 70954 . - 0 ID=cds-WP_000273309.1;Parent=gene-AB25_RS10635;Dbxref=GenBank:WP_000273309.1;Name=WP_000273309.1;gbkey=CDS;gene=yqaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311579.1;locus_tag=AB25_RS10635;product=fructose-1-phosphate/6-phosphogluconate phosphatase;protein_id=WP_000273309.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 71235 71311 . - . ID=gene-AB25_RS10630;Name=AB25_RS10630;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS10630;old_locus_tag=AB25_3041 NZ_JJMC01000050.1 tRNAscan-SE tRNA 71235 71311 . - . ID=rna-AB25_RS10630;Parent=gene-AB25_RS10630;anticodon=(pos:complement(71275..71277));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS10630;product=tRNA-Arg NZ_JJMC01000050.1 tRNAscan-SE exon 71235 71311 . - . ID=exon-AB25_RS10630-1;Parent=rna-AB25_RS10630;anticodon=(pos:complement(71275..71277));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS10630;product=tRNA-Arg NZ_JJMC01000050.1 RefSeq gene 71510 71586 . - . ID=gene-AB25_RS10625;Name=AB25_RS10625;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS10625;old_locus_tag=AB25_3042 NZ_JJMC01000050.1 tRNAscan-SE tRNA 71510 71586 . - . ID=rna-AB25_RS10625;Parent=gene-AB25_RS10625;anticodon=(pos:complement(71550..71552));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS10625;product=tRNA-Arg NZ_JJMC01000050.1 tRNAscan-SE exon 71510 71586 . - . ID=exon-AB25_RS10625-1;Parent=rna-AB25_RS10625;anticodon=(pos:complement(71550..71552));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS10625;product=tRNA-Arg NZ_JJMC01000050.1 RefSeq gene 71650 71726 . - . ID=gene-AB25_RS10620;Name=AB25_RS10620;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS10620;old_locus_tag=AB25_3043 NZ_JJMC01000050.1 tRNAscan-SE tRNA 71650 71726 . - . ID=rna-AB25_RS10620;Parent=gene-AB25_RS10620;anticodon=(pos:complement(71690..71692));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS10620;product=tRNA-Arg NZ_JJMC01000050.1 tRNAscan-SE exon 71650 71726 . - . ID=exon-AB25_RS10620-1;Parent=rna-AB25_RS10620;anticodon=(pos:complement(71690..71692));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS10620;product=tRNA-Arg NZ_JJMC01000050.1 RefSeq gene 71790 71866 . - . ID=gene-AB25_RS10615;Name=AB25_RS10615;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS10615;old_locus_tag=AB25_3044 NZ_JJMC01000050.1 tRNAscan-SE tRNA 71790 71866 . - . ID=rna-AB25_RS10615;Parent=gene-AB25_RS10615;anticodon=(pos:complement(71830..71832));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS10615;product=tRNA-Arg NZ_JJMC01000050.1 tRNAscan-SE exon 71790 71866 . - . ID=exon-AB25_RS10615-1;Parent=rna-AB25_RS10615;anticodon=(pos:complement(71830..71832));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS10615;product=tRNA-Arg NZ_JJMC01000050.1 RefSeq gene 71929 72005 . - . ID=gene-AB25_RS10610;Name=AB25_RS10610;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS10610;old_locus_tag=AB25_3045 NZ_JJMC01000050.1 tRNAscan-SE tRNA 71929 72005 . - . ID=rna-AB25_RS10610;Parent=gene-AB25_RS10610;anticodon=(pos:complement(71969..71971));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS10610;product=tRNA-Arg NZ_JJMC01000050.1 tRNAscan-SE exon 71929 72005 . - . ID=exon-AB25_RS10610-1;Parent=rna-AB25_RS10610;anticodon=(pos:complement(71969..71971));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS10610;product=tRNA-Arg NZ_JJMC01000050.1 RefSeq gene 72203 72279 . - . ID=gene-AB25_RS10605;Name=AB25_RS10605;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS10605;old_locus_tag=AB25_3046 NZ_JJMC01000050.1 tRNAscan-SE tRNA 72203 72279 . - . ID=rna-AB25_RS10605;Parent=gene-AB25_RS10605;anticodon=(pos:complement(72243..72245));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS10605;product=tRNA-Arg NZ_JJMC01000050.1 tRNAscan-SE exon 72203 72279 . - . ID=exon-AB25_RS10605-1;Parent=rna-AB25_RS10605;anticodon=(pos:complement(72243..72245));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS10605;product=tRNA-Arg NZ_JJMC01000050.1 RefSeq gene 72283 72375 . - . ID=gene-AB25_RS10600;Name=AB25_RS10600;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS10600;old_locus_tag=AB25_3047 NZ_JJMC01000050.1 tRNAscan-SE tRNA 72283 72375 . - . ID=rna-AB25_RS10600;Parent=gene-AB25_RS10600;anticodon=(pos:complement(72339..72341));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS10600;product=tRNA-Ser NZ_JJMC01000050.1 tRNAscan-SE exon 72283 72375 . - . ID=exon-AB25_RS10600-1;Parent=rna-AB25_RS10600;anticodon=(pos:complement(72339..72341));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS10600;product=tRNA-Ser NZ_JJMC01000050.1 RefSeq gene 72657 72842 . - . ID=gene-AB25_RS10595;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=AB25_RS10595;old_locus_tag=AB25_3048 NZ_JJMC01000050.1 Protein Homology CDS 72657 72842 . - 0 ID=cds-WP_000906486.1;Parent=gene-AB25_RS10595;Dbxref=GenBank:WP_000906486.1;Name=WP_000906486.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774971.1;locus_tag=AB25_RS10595;product=carbon storage regulator CsrA;protein_id=WP_000906486.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 73077 75707 . - . ID=gene-AB25_RS10590;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=AB25_RS10590;old_locus_tag=AB25_3050 NZ_JJMC01000050.1 Protein Homology CDS 73077 75707 . - 0 ID=cds-WP_032171153.1;Parent=gene-AB25_RS10590;Dbxref=GenBank:WP_032171153.1;Name=WP_032171153.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311581.1;locus_tag=AB25_RS10590;product=alanine--tRNA ligase;protein_id=WP_032171153.1;transl_table=11 NZ_JJMC01000050.1 RefSeq gene 75835 76335 . - . ID=gene-AB25_RS10585;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=AB25_RS10585;old_locus_tag=AB25_3052 NZ_JJMC01000050.1 Protein Homology CDS 75835 76335 . - 0 ID=cds-WP_000140519.1;Parent=gene-AB25_RS10585;Dbxref=GenBank:WP_000140519.1;Name=WP_000140519.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311582.1;locus_tag=AB25_RS10585;product=recombination regulator RecX;protein_id=WP_000140519.1;transl_table=11 ##sequence-region NZ_JJMC01000051.1 1 684 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000051.1 RefSeq region 1 684 . + . ID=NZ_JJMC01000051.1:1..684;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000051.1 RefSeq gene 96 172 . - . ID=gene-AB25_RS10580;Name=AB25_RS10580;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS10580;old_locus_tag=AB25_3054 NZ_JJMC01000051.1 tRNAscan-SE tRNA 96 172 . - . ID=rna-AB25_RS10580;Parent=gene-AB25_RS10580;anticodon=(pos:complement(136..138));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS10580;product=tRNA-Arg NZ_JJMC01000051.1 tRNAscan-SE exon 96 172 . - . ID=exon-AB25_RS10580-1;Parent=rna-AB25_RS10580;anticodon=(pos:complement(136..138));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS10580;product=tRNA-Arg NZ_JJMC01000051.1 RefSeq gene 369 445 . - . ID=gene-AB25_RS10575;Name=AB25_RS10575;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS10575;old_locus_tag=AB25_3055 NZ_JJMC01000051.1 tRNAscan-SE tRNA 369 445 . - . ID=rna-AB25_RS10575;Parent=gene-AB25_RS10575;anticodon=(pos:complement(409..411));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS10575;product=tRNA-Arg NZ_JJMC01000051.1 tRNAscan-SE exon 369 445 . - . ID=exon-AB25_RS10575-1;Parent=rna-AB25_RS10575;anticodon=(pos:complement(409..411));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS10575;product=tRNA-Arg ##sequence-region NZ_JJMC01000052.1 1 87968 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000052.1 RefSeq region 1 87968 . + . ID=NZ_JJMC01000052.1:1..87968;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000052.1 RefSeq gene 1 376 . - . ID=gene-AB25_RS10570;Name=AB25_RS10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS10570;old_locus_tag=AB25_3056;partial=true;start_range=.,1 NZ_JJMC01000052.1 Protein Homology CDS 1 376 . - 0 ID=cds-WP_077757193.1;Parent=gene-AB25_RS10570;Dbxref=GenBank:WP_077757193.1;Name=WP_077757193.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA,ATP binding|0005524||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311581.1;locus_tag=AB25_RS10570;partial=true;product=alanine--tRNA ligase-related protein;protein_id=WP_077757193.1;start_range=.,1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 504 1004 . - . ID=gene-AB25_RS10560;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=AB25_RS10560;old_locus_tag=AB25_3058 NZ_JJMC01000052.1 Protein Homology CDS 504 1004 . - 0 ID=cds-WP_000140519.1-2;Parent=gene-AB25_RS10560;Dbxref=GenBank:WP_000140519.1;Name=WP_000140519.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311582.1;locus_tag=AB25_RS10560;product=recombination regulator RecX;protein_id=WP_000140519.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 1247 2308 . - . ID=gene-AB25_RS10555;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=AB25_RS10555;old_locus_tag=AB25_3060 NZ_JJMC01000052.1 Protein Homology CDS 1247 2308 . - 0 ID=cds-WP_000963143.1;Parent=gene-AB25_RS10555;Dbxref=GenBank:WP_000963143.1;Name=WP_000963143.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311583.1;locus_tag=AB25_RS10555;product=recombinase RecA;protein_id=WP_000963143.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 2388 2885 . - . ID=gene-AB25_RS10550;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=protein_coding;locus_tag=AB25_RS10550;old_locus_tag=AB25_3061 NZ_JJMC01000052.1 Protein Homology CDS 2388 2885 . - 0 ID=cds-WP_000132231.1;Parent=gene-AB25_RS10550;Dbxref=GenBank:WP_000132231.1;Name=WP_000132231.1;gbkey=CDS;gene=pncC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417180.1;locus_tag=AB25_RS10550;product=nicotinamide-nucleotide amidase;protein_id=WP_000132231.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 3030 4115 . - . ID=gene-AB25_RS10545;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=AB25_RS10545;old_locus_tag=AB25_3062 NZ_JJMC01000052.1 Protein Homology CDS 3030 4115 . - 0 ID=cds-WP_001299653.1;Parent=gene-AB25_RS10545;Dbxref=GenBank:WP_001299653.1;Name=WP_001299653.1;gbkey=CDS;gene=mltB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417181.1;locus_tag=AB25_RS10545;product=lytic murein transglycosylase B;protein_id=WP_001299653.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 4371 4934 . + . ID=gene-AB25_RS10540;Name=srlA;gbkey=Gene;gene=srlA;gene_biotype=protein_coding;locus_tag=AB25_RS10540;old_locus_tag=AB25_3063 NZ_JJMC01000052.1 Protein Homology CDS 4371 4934 . + 0 ID=cds-WP_000573325.1;Parent=gene-AB25_RS10540;Dbxref=GenBank:WP_000573325.1;Name=WP_000573325.1;Ontology_term=GO:0009401,GO:0015795;gbkey=CDS;gene=srlA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026180.1;locus_tag=AB25_RS10540;product=PTS glucitol/sorbitol transporter subunit IIC;protein_id=WP_000573325.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 4931 5890 . + . ID=gene-AB25_RS10535;Name=srlE;gbkey=Gene;gene=srlE;gene_biotype=protein_coding;locus_tag=AB25_RS10535;old_locus_tag=AB25_3064 NZ_JJMC01000052.1 Protein Homology CDS 4931 5890 . + 0 ID=cds-WP_000196934.1;Parent=gene-AB25_RS10535;Dbxref=GenBank:WP_000196934.1;Name=WP_000196934.1;Ontology_term=GO:0009401,GO:0015795,GO:0008982,GO:0016301;gbkey=CDS;gene=srlE;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708510.1;locus_tag=AB25_RS10535;product=PTS glucitol/sorbitol transporter subunit IIB;protein_id=WP_000196934.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 5901 6272 . + . ID=gene-AB25_RS10530;Name=srlB;gbkey=Gene;gene=srlB;gene_biotype=protein_coding;gene_synonym=gutB;locus_tag=AB25_RS10530;old_locus_tag=AB25_3065 NZ_JJMC01000052.1 Protein Homology CDS 5901 6272 . + 0 ID=cds-WP_000216201.1;Parent=gene-AB25_RS10530;Dbxref=GenBank:WP_000216201.1;Name=WP_000216201.1;gbkey=CDS;gene=srlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708511.1;locus_tag=AB25_RS10530;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=WP_000216201.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 6276 7055 . + . ID=gene-AB25_RS10525;Name=srlD;gbkey=Gene;gene=srlD;gene_biotype=protein_coding;locus_tag=AB25_RS10525;old_locus_tag=AB25_3066 NZ_JJMC01000052.1 Protein Homology CDS 6276 7055 . + 0 ID=cds-WP_001077342.1;Parent=gene-AB25_RS10525;Dbxref=GenBank:WP_001077342.1;Name=WP_001077342.1;Ontology_term=GO:0016491;gbkey=CDS;gene=srlD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417185.1;locus_tag=AB25_RS10525;product=sorbitol-6-phosphate dehydrogenase;protein_id=WP_001077342.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 7160 7519 . + . ID=gene-AB25_RS10520;Name=gutM;gbkey=Gene;gene=gutM;gene_biotype=protein_coding;locus_tag=AB25_RS10520;old_locus_tag=AB25_3067 NZ_JJMC01000052.1 Protein Homology CDS 7160 7519 . + 0 ID=cds-WP_000252908.1;Parent=gene-AB25_RS10520;Dbxref=GenBank:WP_000252908.1;Name=WP_000252908.1;gbkey=CDS;gene=gutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417186.1;locus_tag=AB25_RS10520;product=transcriptional regulator GutM;protein_id=WP_000252908.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 7586 8359 . + . ID=gene-AB25_RS10515;Name=srlR;gbkey=Gene;gene=srlR;gene_biotype=protein_coding;gene_synonym=gutR;locus_tag=AB25_RS10515;old_locus_tag=AB25_3068 NZ_JJMC01000052.1 Protein Homology CDS 7586 8359 . + 0 ID=cds-WP_000804550.1;Parent=gene-AB25_RS10515;Dbxref=GenBank:WP_000804550.1;Name=WP_000804550.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=srlR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417187.1;locus_tag=AB25_RS10515;product=glucitol operon DNA-binding transcriptional repressor SrlR;protein_id=WP_000804550.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 8352 9317 . + . ID=gene-AB25_RS10510;Name=gutQ;gbkey=Gene;gene=gutQ;gene_biotype=protein_coding;locus_tag=AB25_RS10510;old_locus_tag=AB25_3069 NZ_JJMC01000052.1 Protein Homology CDS 8352 9317 . + 0 ID=cds-WP_001287415.1;Parent=gene-AB25_RS10510;Dbxref=GenBank:WP_001287415.1;Name=WP_001287415.1;gbkey=CDS;gene=gutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311591.2;locus_tag=AB25_RS10510;product=arabinose-5-phosphate isomerase GutQ;protein_id=WP_001287415.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 9314 10828 . - . ID=gene-AB25_RS10505;Name=norR;gbkey=Gene;gene=norR;gene_biotype=protein_coding;locus_tag=AB25_RS10505;old_locus_tag=AB25_3070 NZ_JJMC01000052.1 Protein Homology CDS 9314 10828 . - 0 ID=cds-WP_032296085.1;Parent=gene-AB25_RS10505;Dbxref=GenBank:WP_032296085.1;Name=WP_032296085.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=norR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311592.2;locus_tag=AB25_RS10505;product=nitric oxide reductase transcriptional regulator NorR;protein_id=WP_032296085.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 11015 12454 . + . ID=gene-AB25_RS10500;Name=norV;gbkey=Gene;gene=norV;gene_biotype=protein_coding;locus_tag=AB25_RS10500;old_locus_tag=AB25_3071 NZ_JJMC01000052.1 Protein Homology CDS 11015 12454 . + 0 ID=cds-WP_000029634.1;Parent=gene-AB25_RS10500;Dbxref=GenBank:WP_000029634.1;Name=WP_000029634.1;Ontology_term=GO:0009055,GO:0010181,GO:0016966,GO:0046872;gbkey=CDS;gene=norV;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,nitric oxide reductase activity|0016966||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417190.1;locus_tag=AB25_RS10500;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=WP_000029634.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 12451 13584 . + . ID=gene-AB25_RS10495;Name=norW;gbkey=Gene;gene=norW;gene_biotype=protein_coding;locus_tag=AB25_RS10495;old_locus_tag=AB25_3072 NZ_JJMC01000052.1 Protein Homology CDS 12451 13584 . + 0 ID=cds-WP_000064752.1;Parent=gene-AB25_RS10495;Dbxref=GenBank:WP_000064752.1;Name=WP_000064752.1;Ontology_term=GO:0016731;gbkey=CDS;gene=norW;go_function=oxidoreductase activity%2C acting on iron-sulfur proteins as donors%2C NAD or NADP as acceptor|0016731||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417191.1;locus_tag=AB25_RS10495;product=NADH:flavorubredoxin reductase NorW;protein_id=WP_000064752.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 13712 15964 . - . ID=gene-AB25_RS10490;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=AB25_RS10490;old_locus_tag=AB25_3073 NZ_JJMC01000052.1 Protein Homology CDS 13712 15964 . - 0 ID=cds-WP_032296086.1;Parent=gene-AB25_RS10490;Dbxref=GenBank:WP_032296086.1;Name=WP_032296086.1;Ontology_term=GO:0036211,GO:0003998,GO:0016743,GO:0046872;gbkey=CDS;gene=hypF;go_function=acylphosphatase activity|0003998||IEA,carboxyl- or carbamoyltransferase activity|0016743||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417192.1;locus_tag=AB25_RS10490;product=carbamoyltransferase HypF;protein_id=WP_032296086.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 16117 16644 . - . ID=gene-AB25_RS10485;Name=hydN;gbkey=Gene;gene=hydN;gene_biotype=protein_coding;locus_tag=AB25_RS10485;old_locus_tag=AB25_3075 NZ_JJMC01000052.1 Protein Homology CDS 16117 16644 . - 0 ID=cds-WP_001078777.1;Parent=gene-AB25_RS10485;Dbxref=GenBank:WP_001078777.1;Name=WP_001078777.1;gbkey=CDS;gene=hydN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311596.1;locus_tag=AB25_RS10485;product=electron transport protein HydN;protein_id=WP_001078777.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 16793 17803 . - . ID=gene-AB25_RS10480;Name=ascG;gbkey=Gene;gene=ascG;gene_biotype=protein_coding;locus_tag=AB25_RS10480;old_locus_tag=AB25_3077 NZ_JJMC01000052.1 Protein Homology CDS 16793 17803 . - 0 ID=cds-WP_001392554.1;Parent=gene-AB25_RS10480;Dbxref=GenBank:WP_001392554.1;Name=WP_001392554.1;gbkey=CDS;gene=ascG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417194.2;locus_tag=AB25_RS10480;product=DNA-binding transcriptional regulator AscG;protein_id=WP_001392554.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 18063 19520 . + . ID=gene-AB25_RS10475;Name=ascF;gbkey=Gene;gene=ascF;gene_biotype=protein_coding;locus_tag=AB25_RS10475;old_locus_tag=AB25_3078 NZ_JJMC01000052.1 Protein Homology CDS 18063 19520 . + 0 ID=cds-WP_032296088.1;Parent=gene-AB25_RS10475;Dbxref=GenBank:WP_032296088.1;Name=WP_032296088.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=ascF;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026182.1;locus_tag=AB25_RS10475;product=PTS cellobiose/arbutin/salicin transporter subunit IIBC;protein_id=WP_032296088.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 19529 20953 . + . ID=gene-AB25_RS10470;Name=ascB;gbkey=Gene;gene=ascB;gene_biotype=protein_coding;locus_tag=AB25_RS10470;old_locus_tag=AB25_3079 NZ_JJMC01000052.1 Protein Homology CDS 19529 20953 . + 0 ID=cds-WP_000110363.1;Parent=gene-AB25_RS10470;Dbxref=GenBank:WP_000110363.1;Name=WP_000110363.1;gbkey=CDS;gene=ascB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417196.1;locus_tag=AB25_RS10470;product=6-phospho-beta-glucosidase AscB;protein_id=WP_000110363.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 21067 21486 . - . ID=gene-AB25_RS0125815;Name=AB25_RS0125815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0125815;old_locus_tag=AB25_3080 NZ_JJMC01000052.1 Protein Homology CDS 21067 21486 . - 0 ID=cds-WP_000126294.1;Parent=gene-AB25_RS0125815;Dbxref=GenBank:WP_000126294.1;Name=WP_000126294.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001696729.1;locus_tag=AB25_RS0125815;product=helix-turn-helix domain-containing protein;protein_id=WP_000126294.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 21483 21794 . - . ID=gene-AB25_RS10465;Name=AB25_RS10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS10465;old_locus_tag=AB25_3082 NZ_JJMC01000052.1 Protein Homology CDS 21483 21794 . - 0 ID=cds-WP_000547564.1;Parent=gene-AB25_RS10465;Dbxref=GenBank:WP_000547564.1;Name=WP_000547564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233494.1;locus_tag=AB25_RS10465;product=type II toxin-antitoxin system HigB family toxin;protein_id=WP_000547564.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 21968 22729 . - . ID=gene-AB25_RS10460;Name=AB25_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS10460;old_locus_tag=AB25_3083 NZ_JJMC01000052.1 Protein Homology CDS 21968 22729 . - 0 ID=cds-WP_001026446.1;Parent=gene-AB25_RS10460;Dbxref=GenBank:WP_001026446.1;Name=WP_001026446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001026455.1;locus_tag=AB25_RS10460;product=hypothetical protein;protein_id=WP_001026446.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 22754 23224 . - . ID=gene-AB25_RS10455;Name=hycI;gbkey=Gene;gene=hycI;gene_biotype=protein_coding;locus_tag=AB25_RS10455;old_locus_tag=AB25_3084 NZ_JJMC01000052.1 Protein Homology CDS 22754 23224 . - 0 ID=cds-WP_000132961.1;Parent=gene-AB25_RS10455;Dbxref=GenBank:WP_000132961.1;Name=WP_000132961.1;Ontology_term=GO:0036211,GO:0004190;gbkey=CDS;gene=hycI;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311600.1;locus_tag=AB25_RS10455;product=hydrogenase maturation peptidase HycI;protein_id=WP_000132961.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 23217 23627 . - . ID=gene-AB25_RS10450;Name=hycH;gbkey=Gene;gene=hycH;gene_biotype=protein_coding;locus_tag=AB25_RS10450;old_locus_tag=AB25_3085 NZ_JJMC01000052.1 Protein Homology CDS 23217 23627 . - 0 ID=cds-WP_001291921.1;Parent=gene-AB25_RS10450;Dbxref=GenBank:WP_001291921.1;Name=WP_001291921.1;gbkey=CDS;gene=hycH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311601.1;locus_tag=AB25_RS10450;product=formate hydrogenlyase assembly protein HycH;protein_id=WP_001291921.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 23624 24391 . - . ID=gene-AB25_RS10445;Name=hycG;gbkey=Gene;gene=hycG;gene_biotype=protein_coding;locus_tag=AB25_RS10445;old_locus_tag=AB25_3086 NZ_JJMC01000052.1 Protein Homology CDS 23624 24391 . - 0 ID=cds-WP_000067399.1;Parent=gene-AB25_RS10445;Dbxref=GenBank:WP_000067399.1;Name=WP_000067399.1;gbkey=CDS;gene=hycG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311602.1;locus_tag=AB25_RS10445;product=formate hydrogenlyase subunit HycG;protein_id=WP_000067399.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 24391 24933 . - . ID=gene-AB25_RS10440;Name=hycF;gbkey=Gene;gene=hycF;gene_biotype=protein_coding;locus_tag=AB25_RS10440;old_locus_tag=AB25_3087 NZ_JJMC01000052.1 Protein Homology CDS 24391 24933 . - 0 ID=cds-WP_000493792.1;Parent=gene-AB25_RS10440;Dbxref=GenBank:WP_000493792.1;Name=WP_000493792.1;gbkey=CDS;gene=hycF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311603.1;locus_tag=AB25_RS10440;product=formate hydrogenlyase subunit HycF;protein_id=WP_000493792.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 24943 26652 . - . ID=gene-AB25_RS10435;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=AB25_RS10435;old_locus_tag=AB25_3088 NZ_JJMC01000052.1 Protein Homology CDS 24943 26652 . - 0 ID=cds-WP_001288134.1;Parent=gene-AB25_RS10435;Dbxref=GenBank:WP_001288134.1;Name=WP_001288134.1;gbkey=CDS;gene=hycE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130590.1;locus_tag=AB25_RS10435;product=formate hydrogenlyase subunit HycE;protein_id=WP_001288134.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 26670 27593 . - . ID=gene-AB25_RS10430;Name=hycD;gbkey=Gene;gene=hycD;gene_biotype=protein_coding;locus_tag=AB25_RS10430;old_locus_tag=AB25_3089 NZ_JJMC01000052.1 Protein Homology CDS 26670 27593 . - 0 ID=cds-WP_000115199.1;Parent=gene-AB25_RS10430;Dbxref=GenBank:WP_000115199.1;Name=WP_000115199.1;gbkey=CDS;gene=hycD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417202.1;locus_tag=AB25_RS10430;product=formate hydrogenlyase subunit HycD;protein_id=WP_000115199.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 27596 29422 . - . ID=gene-AB25_RS10425;Name=hycC;gbkey=Gene;gene=hycC;gene_biotype=protein_coding;locus_tag=AB25_RS10425;old_locus_tag=AB25_3090 NZ_JJMC01000052.1 Protein Homology CDS 27596 29422 . - 0 ID=cds-WP_001274389.1;Parent=gene-AB25_RS10425;Dbxref=GenBank:WP_001274389.1;Name=WP_001274389.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=hycC;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417203.1;locus_tag=AB25_RS10425;product=formate hydrogenlyase subunit 3;protein_id=WP_001274389.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 29419 30030 . - . ID=gene-AB25_RS10420;Name=hycB;gbkey=Gene;gene=hycB;gene_biotype=protein_coding;locus_tag=AB25_RS10420;old_locus_tag=AB25_3091 NZ_JJMC01000052.1 Protein Homology CDS 29419 30030 . - 0 ID=cds-WP_001079186.1;Parent=gene-AB25_RS10420;Dbxref=GenBank:WP_001079186.1;Name=WP_001079186.1;gbkey=CDS;gene=hycB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417204.1;locus_tag=AB25_RS10420;product=formate hydrogenlyase subunit HycB;protein_id=WP_001079186.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 30155 30616 . - . ID=gene-AB25_RS10415;Name=hycA;gbkey=Gene;gene=hycA;gene_biotype=protein_coding;locus_tag=AB25_RS10415;old_locus_tag=AB25_3092 NZ_JJMC01000052.1 Protein Homology CDS 30155 30616 . - 0 ID=cds-WP_000158056.1;Parent=gene-AB25_RS10415;Dbxref=GenBank:WP_000158056.1;Name=WP_000158056.1;gbkey=CDS;gene=hycA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311608.1;locus_tag=AB25_RS10415;product=formate hydrogenlyase regulator HycA;protein_id=WP_000158056.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 30828 31178 . + . ID=gene-AB25_RS10410;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=AB25_RS10410;old_locus_tag=AB25_3093 NZ_JJMC01000052.1 Protein Homology CDS 30828 31178 . + 0 ID=cds-WP_001299100.1;Parent=gene-AB25_RS10410;Dbxref=GenBank:WP_001299100.1;Name=WP_001299100.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311609.1;locus_tag=AB25_RS10410;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_001299100.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 31182 32054 . + . ID=gene-AB25_RS10405;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=AB25_RS10405;old_locus_tag=AB25_3094 NZ_JJMC01000052.1 Protein Homology CDS 31182 32054 . + 0 ID=cds-WP_000337674.1;Parent=gene-AB25_RS10405;Dbxref=GenBank:WP_000337674.1;Name=WP_000337674.1;Ontology_term=GO:0051604,GO:0003924,GO:0016151;gbkey=CDS;gene=hypB;go_function=GTPase activity|0003924||IEA,nickel cation binding|0016151||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417207.1;locus_tag=AB25_RS10405;product=hydrogenase nickel incorporation protein HypB;protein_id=WP_000337674.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 32045 32317 . + . ID=gene-AB25_RS10400;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=AB25_RS10400;old_locus_tag=AB25_3095 NZ_JJMC01000052.1 Protein Homology CDS 32045 32317 . + 0 ID=cds-WP_000334881.1;Parent=gene-AB25_RS10400;Dbxref=GenBank:WP_000334881.1;Name=WP_000334881.1;gbkey=CDS;gene=hypC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311611.1;locus_tag=AB25_RS10400;product=hydrogenase 3 maturation protein HypC;protein_id=WP_000334881.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 32317 33438 . + . ID=gene-AB25_RS10395;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=AB25_RS10395;old_locus_tag=AB25_3096 NZ_JJMC01000052.1 Protein Homology CDS 32317 33438 . + 0 ID=cds-WP_001212989.1;Parent=gene-AB25_RS10395;Dbxref=GenBank:WP_001212989.1;Name=WP_001212989.1;Ontology_term=GO:0036211,GO:0016530;gbkey=CDS;gene=hypD;go_function=metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708530.1;locus_tag=AB25_RS10395;product=hydrogenase formation protein HypD;protein_id=WP_001212989.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 33435 34445 . + . ID=gene-AB25_RS10390;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=AB25_RS10390;old_locus_tag=AB25_3097 NZ_JJMC01000052.1 Protein Homology CDS 33435 34445 . + 0 ID=cds-WP_001059939.1;Parent=gene-AB25_RS10390;Dbxref=GenBank:WP_001059939.1;Name=WP_001059939.1;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417210.2;locus_tag=AB25_RS10390;product=hydrogenase maturation carbamoyl dehydratase HypE;protein_id=WP_001059939.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 34519 36597 . + . ID=gene-AB25_RS10385;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=AB25_RS10385;old_locus_tag=AB25_3098 NZ_JJMC01000052.1 Protein Homology CDS 34519 36597 . + 0 ID=cds-WP_032171159.1;Parent=gene-AB25_RS10385;Dbxref=GenBank:WP_032171159.1;Name=WP_032171159.1;Ontology_term=GO:0006355,GO:0005515,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=flhA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311614.1;locus_tag=AB25_RS10385;product=formate hydrogenlyase transcriptional activator FlhA;protein_id=WP_032171159.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 36634 36987 . - . ID=gene-AB25_RS10380;Name=ygbA;gbkey=Gene;gene=ygbA;gene_biotype=protein_coding;locus_tag=AB25_RS10380;old_locus_tag=AB25_3099 NZ_JJMC01000052.1 Protein Homology CDS 36634 36987 . - 0 ID=cds-WP_000015499.1;Parent=gene-AB25_RS10380;Dbxref=GenBank:WP_000015499.1;Name=WP_000015499.1;gbkey=CDS;gene=ygbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708533.1;locus_tag=AB25_RS10380;product=nitrous oxide-stimulated promoter family protein;protein_id=WP_000015499.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 37064 37198 . - . ID=gene-AB25_RS31755;Name=AB25_RS31755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31755;old_locus_tag=AB25_3100 NZ_JJMC01000052.1 Protein Homology CDS 37064 37198 . - 0 ID=cds-WP_000611926.1;Parent=gene-AB25_RS31755;Dbxref=GenBank:WP_000611926.1;Name=WP_000611926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439274.1;locus_tag=AB25_RS31755;product=hypothetical protein;protein_id=WP_000611926.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 37274 39835 . + . ID=gene-AB25_RS10375;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=AB25_RS10375;old_locus_tag=AB25_3101 NZ_JJMC01000052.1 Protein Homology CDS 37274 39835 . + 0 ID=cds-WP_001272924.1;Parent=gene-AB25_RS10375;Dbxref=GenBank:WP_001272924.1;Name=WP_001272924.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311616.1;locus_tag=AB25_RS10375;product=DNA mismatch repair protein MutS;protein_id=WP_001272924.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 39941 40597 . + . ID=gene-AB25_RS10370;Name=pphB;gbkey=Gene;gene=pphB;gene_biotype=protein_coding;locus_tag=AB25_RS10370;old_locus_tag=AB25_3102 NZ_JJMC01000052.1 Protein Homology CDS 39941 40597 . + 0 ID=cds-WP_001141340.1;Parent=gene-AB25_RS10370;Dbxref=GenBank:WP_001141340.1;Name=WP_001141340.1;gbkey=CDS;gene=pphB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311617.1;locus_tag=AB25_RS10370;product=protein-serine/threonine phosphatase;protein_id=WP_001141340.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 40648 41415 . - . ID=gene-AB25_RS10365;Name=ygbI;gbkey=Gene;gene=ygbI;gene_biotype=protein_coding;locus_tag=AB25_RS10365;old_locus_tag=AB25_3103 NZ_JJMC01000052.1 Protein Homology CDS 40648 41415 . - 0 ID=cds-WP_001297141.1;Parent=gene-AB25_RS10365;Dbxref=GenBank:WP_001297141.1;Name=WP_001297141.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ygbI;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417215.2;locus_tag=AB25_RS10365;product=DNA-binding transcriptional repressor YgbI;protein_id=WP_001297141.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 41611 42519 . + . ID=gene-AB25_RS10360;Name=ltnD;gbkey=Gene;gene=ltnD;gene_biotype=protein_coding;locus_tag=AB25_RS10360;old_locus_tag=AB25_3104 NZ_JJMC01000052.1 Protein Homology CDS 41611 42519 . + 0 ID=cds-WP_000847983.1;Parent=gene-AB25_RS10360;Dbxref=GenBank:WP_000847983.1;Name=WP_000847983.1;Ontology_term=GO:0005975,GO:0016616;gbkey=CDS;gene=ltnD;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417216.1;locus_tag=AB25_RS10360;product=L-threonate dehydrogenase;protein_id=WP_000847983.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 42516 43778 . + . ID=gene-AB25_RS10355;Name=otnK;gbkey=Gene;gene=otnK;gene_biotype=protein_coding;locus_tag=AB25_RS10355;old_locus_tag=AB25_3105 NZ_JJMC01000052.1 Protein Homology CDS 42516 43778 . + 0 ID=cds-WP_032171160.1;Parent=gene-AB25_RS10355;Dbxref=GenBank:WP_032171160.1;Name=WP_032171160.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;gene=otnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001649192.1;locus_tag=AB25_RS10355;product=3-oxo-tetronate kinase;protein_id=WP_032171160.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 43775 44413 . + . ID=gene-AB25_RS10350;Name=ygbL;gbkey=Gene;gene=ygbL;gene_biotype=protein_coding;locus_tag=AB25_RS10350;old_locus_tag=AB25_3106 NZ_JJMC01000052.1 Protein Homology CDS 43775 44413 . + 0 ID=cds-WP_001278994.1;Parent=gene-AB25_RS10350;Dbxref=GenBank:WP_001278994.1;Name=WP_001278994.1;gbkey=CDS;gene=ygbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417218.1;locus_tag=AB25_RS10350;product=aldolase;protein_id=WP_001278994.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 44418 45194 . + . ID=gene-AB25_RS10345;Name=ygbM;gbkey=Gene;gene=ygbM;gene_biotype=protein_coding;locus_tag=AB25_RS10345;old_locus_tag=AB25_3107 NZ_JJMC01000052.1 Protein Homology CDS 44418 45194 . + 0 ID=cds-WP_001136918.1;Parent=gene-AB25_RS10345;Dbxref=GenBank:WP_001136918.1;Name=WP_001136918.1;gbkey=CDS;gene=ygbM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417219.1;locus_tag=AB25_RS10345;product=HPr family phosphocarrier protein;protein_id=WP_001136918.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 45283 46647 . + . ID=gene-AB25_RS10340;Name=ygbN;gbkey=Gene;gene=ygbN;gene_biotype=protein_coding;locus_tag=AB25_RS10340;old_locus_tag=AB25_3108 NZ_JJMC01000052.1 Protein Homology CDS 45283 46647 . + 0 ID=cds-WP_000104456.1;Parent=gene-AB25_RS10340;Dbxref=GenBank:WP_000104456.1;Name=WP_000104456.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=ygbN;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417220.1;locus_tag=AB25_RS10340;product=GntP family transporter;protein_id=WP_000104456.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 46741 47733 . - . ID=gene-AB25_RS10335;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=AB25_RS10335;old_locus_tag=AB25_3109 NZ_JJMC01000052.1 Protein Homology CDS 46741 47733 . - 0 ID=cds-WP_000081550.1;Parent=gene-AB25_RS10335;Dbxref=GenBank:WP_000081550.1;Name=WP_000081550.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=AB25_RS10335;product=RNA polymerase sigma factor RpoS;protein_id=WP_000081550.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 47796 48890 . - . ID=gene-AB25_RS10330;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=AB25_RS10330;old_locus_tag=AB25_3110 NZ_JJMC01000052.1 Protein Homology CDS 47796 48890 . - 0 ID=cds-WP_306174120.1;Parent=gene-AB25_RS10330;Dbxref=GenBank:WP_306174120.1;Name=WP_306174120.1;gbkey=CDS;gene=nlpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417222.1;locus_tag=AB25_RS10330;product=murein hydrolase activator NlpD;protein_id=WP_306174120.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 49075 49701 . - . ID=gene-AB25_RS10325;Name=pcm;gbkey=Gene;gene=pcm;gene_biotype=protein_coding;locus_tag=AB25_RS10325;old_locus_tag=AB25_3111 NZ_JJMC01000052.1 Protein Homology CDS 49075 49701 . - 0 ID=cds-WP_000254708.1;Parent=gene-AB25_RS10325;Dbxref=GenBank:WP_000254708.1;Name=WP_000254708.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;gene=pcm;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130872.1;locus_tag=AB25_RS10325;product=protein-L-isoaspartate O-methyltransferase;protein_id=WP_000254708.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 49695 50456 . - . ID=gene-AB25_RS10320;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=AB25_RS10320;old_locus_tag=AB25_3112 NZ_JJMC01000052.1 Protein Homology CDS 49695 50456 . - 0 ID=cds-WP_001295182.1;Parent=gene-AB25_RS10320;Dbxref=GenBank:WP_001295182.1;Name=WP_001295182.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311625.1;locus_tag=AB25_RS10320;product=5'/3'-nucleotidase SurE;protein_id=WP_001295182.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 50437 51486 . - . ID=gene-AB25_RS10315;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=AB25_RS10315;old_locus_tag=AB25_3113 NZ_JJMC01000052.1 Protein Homology CDS 50437 51486 . - 0 ID=cds-WP_000568943.1;Parent=gene-AB25_RS10315;Dbxref=GenBank:WP_000568943.1;Name=WP_000568943.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417225.1;locus_tag=AB25_RS10315;product=tRNA pseudouridine(13) synthase TruD;protein_id=WP_000568943.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 51483 51962 . - . ID=gene-AB25_RS10310;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=AB25_RS10310;old_locus_tag=AB25_3114 NZ_JJMC01000052.1 Protein Homology CDS 51483 51962 . - 0 ID=cds-WP_001219242.1;Parent=gene-AB25_RS10310;Dbxref=GenBank:WP_001219242.1;Name=WP_001219242.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311627.1;locus_tag=AB25_RS10310;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_001219242.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 51962 52672 . - . ID=gene-AB25_RS10305;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=AB25_RS10305;old_locus_tag=AB25_3115 NZ_JJMC01000052.1 Protein Homology CDS 51962 52672 . - 0 ID=cds-WP_001392531.1;Parent=gene-AB25_RS10305;Dbxref=GenBank:WP_001392531.1;Name=WP_001392531.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417227.1;locus_tag=AB25_RS10305;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_001392531.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 52691 53002 . - . ID=gene-AB25_RS10300;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=AB25_RS10300;old_locus_tag=AB25_3116 NZ_JJMC01000052.1 Protein Homology CDS 52691 53002 . - 0 ID=cds-WP_000517476.1;Parent=gene-AB25_RS10300;Dbxref=GenBank:WP_000517476.1;Name=WP_000517476.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311629.1;locus_tag=AB25_RS10300;product=cell division protein FtsB;protein_id=WP_000517476.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 53196 53519 . - . ID=gene-AB25_RS10295;Name=ygbE;gbkey=Gene;gene=ygbE;gene_biotype=protein_coding;locus_tag=AB25_RS10295;old_locus_tag=AB25_3117 NZ_JJMC01000052.1 Protein Homology CDS 53196 53519 . - 0 ID=cds-WP_001246104.1;Parent=gene-AB25_RS10295;Dbxref=GenBank:WP_001246104.1;Name=WP_001246104.1;gbkey=CDS;gene=ygbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417229.1;locus_tag=AB25_RS10295;product=DUF3561 family protein;protein_id=WP_001246104.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 53569 54174 . - . ID=gene-AB25_RS10290;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=AB25_RS10290;old_locus_tag=AB25_3118 NZ_JJMC01000052.1 Protein Homology CDS 53569 54174 . - 0 ID=cds-WP_001173673.1;Parent=gene-AB25_RS10290;Dbxref=GenBank:WP_001173673.1;Name=WP_001173673.1;Ontology_term=GO:0000103,GO:0004020,GO:0005524;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA,ATP binding|0005524||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311631.1;locus_tag=AB25_RS10290;product=adenylyl-sulfate kinase;protein_id=WP_001173673.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 54174 55601 . - . ID=gene-AB25_RS10285;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=AB25_RS10285;old_locus_tag=AB25_3119 NZ_JJMC01000052.1 Protein Homology CDS 54174 55601 . - 0 ID=cds-WP_001090386.1;Parent=gene-AB25_RS10285;Dbxref=GenBank:WP_001090386.1;Name=WP_001090386.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417231.1;locus_tag=AB25_RS10285;product=sulfate adenylyltransferase subunit CysN;protein_id=WP_001090386.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 55603 56511 . - . ID=gene-AB25_RS10280;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=AB25_RS10280;old_locus_tag=AB25_3120 NZ_JJMC01000052.1 Protein Homology CDS 55603 56511 . - 0 ID=cds-WP_000372108.1;Parent=gene-AB25_RS10280;Dbxref=GenBank:WP_000372108.1;Name=WP_000372108.1;Ontology_term=GO:0000103,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130891.1;locus_tag=AB25_RS10280;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_000372108.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 56763 57800 . + . ID=gene-AB25_RS10275;Name=iap;gbkey=Gene;gene=iap;gene_biotype=protein_coding;locus_tag=AB25_RS10275;old_locus_tag=AB25_3121 NZ_JJMC01000052.1 Protein Homology CDS 56763 57800 . + 0 ID=cds-WP_000490426.1;Parent=gene-AB25_RS10275;Dbxref=GenBank:WP_000490426.1;Name=WP_000490426.1;gbkey=CDS;gene=iap;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311634.1;locus_tag=AB25_RS10275;product=alkaline phosphatase isozyme conversion aminopeptidase;protein_id=WP_000490426.1;transl_table=11 NZ_JJMC01000052.1 RefSeq direct_repeat 57883 58459 . + . ID=id-NZ_JJMC01000052.1:57883..58459;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=57883..57910;rpt_unit_seq=ggtttatccccgctggcgcggggaacac NZ_JJMC01000052.1 RefSeq gene 58556 58849 . - . ID=gene-AB25_RS10270;Name=cas2e;gbkey=Gene;gene=cas2e;gene_biotype=protein_coding;locus_tag=AB25_RS10270;old_locus_tag=AB25_3125 NZ_JJMC01000052.1 Protein Homology CDS 58556 58849 . - 0 ID=cds-WP_000063176.1;Parent=gene-AB25_RS10270;Dbxref=GenBank:WP_000063176.1;Name=WP_000063176.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2e;go_function=RNA endonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311635.1;locus_tag=AB25_RS10270;product=type I-E CRISPR-associated endoribonuclease Cas2e;protein_id=WP_000063176.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 58846 59769 . - . ID=gene-AB25_RS10265;Name=cas1e;gbkey=Gene;gene=cas1e;gene_biotype=protein_coding;locus_tag=AB25_RS10265;old_locus_tag=AB25_3126 NZ_JJMC01000052.1 Protein Homology CDS 58846 59769 . - 0 ID=cds-WP_000144861.1;Parent=gene-AB25_RS10265;Dbxref=GenBank:WP_000144861.1;Name=WP_000144861.1;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1e;go_function=nucleic acid binding|0003676||IEA,DNA endonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311636.1;locus_tag=AB25_RS10265;product=type I-E CRISPR-associated endonuclease Cas1e;protein_id=WP_000144861.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 59766 60416 . - . ID=gene-AB25_RS10260;Name=cas6e;gbkey=Gene;gene=cas6e;gene_biotype=protein_coding;locus_tag=AB25_RS10260;old_locus_tag=AB25_3127 NZ_JJMC01000052.1 Protein Homology CDS 59766 60416 . - 0 ID=cds-WP_000281446.1;Parent=gene-AB25_RS10260;Dbxref=GenBank:WP_000281446.1;Name=WP_000281446.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas6e;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000281458.1;locus_tag=AB25_RS10260;product=type I-E CRISPR-associated protein Cas6/Cse3/CasE;protein_id=WP_000281446.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 60398 61144 . - . ID=gene-AB25_RS10255;Name=cas5e;gbkey=Gene;gene=cas5e;gene_biotype=protein_coding;locus_tag=AB25_RS10255;old_locus_tag=AB25_3128 NZ_JJMC01000052.1 Protein Homology CDS 60398 61144 . - 0 ID=cds-WP_000085051.1;Parent=gene-AB25_RS10255;Dbxref=GenBank:WP_000085051.1;Name=WP_000085051.1;Ontology_term=GO:0043571,GO:0051607,GO:0003723;gbkey=CDS;gene=cas5e;go_function=RNA binding|0003723||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311638.1;locus_tag=AB25_RS10255;product=type I-E CRISPR-associated protein Cas5/CasD;protein_id=WP_000085051.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 61155 62210 . - . ID=gene-AB25_RS10250;Name=cas7e;gbkey=Gene;gene=cas7e;gene_biotype=protein_coding;locus_tag=AB25_RS10250;old_locus_tag=AB25_3129 NZ_JJMC01000052.1 Protein Homology CDS 61155 62210 . - 0 ID=cds-WP_000206443.1;Parent=gene-AB25_RS10250;Dbxref=GenBank:WP_000206443.1;Name=WP_000206443.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas7e;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311639.1;locus_tag=AB25_RS10250;product=type I-E CRISPR-associated protein Cas7/Cse4/CasC;protein_id=WP_000206443.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 62222 62758 . - . ID=gene-AB25_RS10245;Name=casB;gbkey=Gene;gene=casB;gene_biotype=protein_coding;gene_synonym=cse2;locus_tag=AB25_RS10245;old_locus_tag=AB25_3130 NZ_JJMC01000052.1 Protein Homology CDS 62222 62758 . - 0 ID=cds-WP_000029329.1;Parent=gene-AB25_RS10245;Dbxref=GenBank:WP_000029329.1;Name=WP_000029329.1;Ontology_term=GO:0043571;gbkey=CDS;gene=casB;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311640.1;locus_tag=AB25_RS10245;product=type I-E CRISPR-associated protein Cse2/CasB;protein_id=WP_000029329.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 62755 64317 . - . ID=gene-AB25_RS10240;Name=casA;gbkey=Gene;gene=casA;gene_biotype=protein_coding;gene_synonym=cse1;locus_tag=AB25_RS10240;old_locus_tag=AB25_3131 NZ_JJMC01000052.1 Protein Homology CDS 62755 64317 . - 0 ID=cds-WP_001084084.1;Parent=gene-AB25_RS10240;Dbxref=GenBank:WP_001084084.1;Name=WP_001084084.1;Ontology_term=GO:0043571;gbkey=CDS;gene=casA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311641.1;locus_tag=AB25_RS10240;product=type I-E CRISPR-associated protein Cse1/CasA;protein_id=WP_001084084.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 64415 67114 . - . ID=gene-AB25_RS10235;Name=AB25_RS10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS10235;old_locus_tag=AB25_3132 NZ_JJMC01000052.1 Protein Homology CDS 64415 67114 . - 0 ID=cds-WP_001233970.1;Parent=gene-AB25_RS10235;Dbxref=GenBank:WP_001233970.1;Name=WP_001233970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001233973.1;locus_tag=AB25_RS10235;product=CRISPR-associated helicase/endonuclease Cas3;protein_id=WP_001233970.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 67308 67460 . - . ID=gene-AB25_RS10230;Name=AB25_RS10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS10230;old_locus_tag=AB25_3133 NZ_JJMC01000052.1 Protein Homology CDS 67308 67460 . - 0 ID=cds-WP_000956458.1;Parent=gene-AB25_RS10230;Dbxref=GenBank:WP_000956458.1;Name=WP_000956458.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311643.1;locus_tag=AB25_RS10230;product=Hok/Gef family protein;protein_id=WP_000956458.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 67725 68459 . - . ID=gene-AB25_RS10225;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;locus_tag=AB25_RS10225;old_locus_tag=AB25_3134 NZ_JJMC01000052.1 Protein Homology CDS 67725 68459 . - 0 ID=cds-WP_000039842.1;Parent=gene-AB25_RS10225;Dbxref=GenBank:WP_000039842.1;Name=WP_000039842.1;Ontology_term=GO:0019379,GO:0004604;gbkey=CDS;gene=cysH;go_function=phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708560.2;locus_tag=AB25_RS10225;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_000039842.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 68533 70245 . - . ID=gene-AB25_RS10220;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=AB25_RS10220;old_locus_tag=AB25_3135 NZ_JJMC01000052.1 Protein Homology CDS 68533 70245 . - 0 ID=cds-WP_001290706.1;Parent=gene-AB25_RS10220;Dbxref=GenBank:WP_001290706.1;Name=WP_001290706.1;Ontology_term=GO:0000103,GO:0008652,GO:0004783,GO:0050661,GO:0051539,GO:0009337;gbkey=CDS;gene=cysI;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA,NADP binding|0050661||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=sulfate assimilation|0000103||IEA,amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290736.1;locus_tag=AB25_RS10220;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=WP_001290706.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 70245 72044 . - . ID=gene-AB25_RS10215;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=AB25_RS10215;old_locus_tag=AB25_3136 NZ_JJMC01000052.1 Protein Homology CDS 70245 72044 . - 0 ID=cds-WP_000211954.1;Parent=gene-AB25_RS10215;Dbxref=GenBank:WP_000211954.1;Name=WP_000211954.1;Ontology_term=GO:0000103,GO:0019344,GO:0004783,GO:0010181,GO:0050660;gbkey=CDS;gene=cysJ;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfate assimilation|0000103||IEA,cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417244.1;locus_tag=AB25_RS10215;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;protein_id=WP_000211954.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 72363 72725 . + . ID=gene-AB25_RS10210;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=AB25_RS10210;old_locus_tag=AB25_3138 NZ_JJMC01000052.1 Protein Homology CDS 72363 72725 . + 0 ID=cds-WP_000108294.1;Parent=gene-AB25_RS10210;Dbxref=GenBank:WP_000108294.1;Name=WP_000108294.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708563.2;locus_tag=AB25_RS10210;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_000108294.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 72803 74074 . + . ID=gene-AB25_RS10205;Name=ygcN;gbkey=Gene;gene=ygcN;gene_biotype=protein_coding;locus_tag=AB25_RS10205;old_locus_tag=AB25_3139 NZ_JJMC01000052.1 Protein Homology CDS 72803 74074 . + 0 ID=cds-WP_001295150.1;Parent=gene-AB25_RS10205;Dbxref=GenBank:WP_001295150.1;Name=WP_001295150.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ygcN;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417246.4;locus_tag=AB25_RS10205;product=FAD-dependent oxidoreductase;protein_id=WP_001295150.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 74065 74325 . + . ID=gene-AB25_RS10200;Name=ygcO;gbkey=Gene;gene=ygcO;gene_biotype=protein_coding;locus_tag=AB25_RS10200;old_locus_tag=AB25_3140 NZ_JJMC01000052.1 Protein Homology CDS 74065 74325 . + 0 ID=cds-WP_000109532.1;Parent=gene-AB25_RS10200;Dbxref=GenBank:WP_000109532.1;Name=WP_000109532.1;gbkey=CDS;gene=ygcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417247.2;locus_tag=AB25_RS10200;product=ferredoxin family protein;protein_id=WP_000109532.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 74342 74917 . + . ID=gene-AB25_RS10195;Name=ygcP;gbkey=Gene;gene=ygcP;gene_biotype=protein_coding;locus_tag=AB25_RS10195;old_locus_tag=AB25_3141 NZ_JJMC01000052.1 Protein Homology CDS 74342 74917 . + 0 ID=cds-WP_024169469.1;Parent=gene-AB25_RS10195;Dbxref=GenBank:WP_024169469.1;Name=WP_024169469.1;gbkey=CDS;gene=ygcP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417248.1;locus_tag=AB25_RS10195;product=glycerol-3-phosphate responsive antiterminator;protein_id=WP_024169469.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 75065 75925 . - . ID=gene-AB25_RS10190;Name=ygcQ;gbkey=Gene;gene=ygcQ;gene_biotype=protein_coding;locus_tag=AB25_RS10190;old_locus_tag=AB25_3142 NZ_JJMC01000052.1 Protein Homology CDS 75065 75925 . - 0 ID=cds-WP_001324446.1;Parent=gene-AB25_RS10190;Dbxref=GenBank:WP_001324446.1;Name=WP_001324446.1;Ontology_term=GO:0009055,GO:0050660;gbkey=CDS;gene=ygcQ;go_function=electron transfer activity|0009055||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417249.4;locus_tag=AB25_RS10190;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_001324446.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 75922 76701 . - . ID=gene-AB25_RS10185;Name=ygcR;gbkey=Gene;gene=ygcR;gene_biotype=protein_coding;locus_tag=AB25_RS10185;old_locus_tag=AB25_3143 NZ_JJMC01000052.1 Protein Homology CDS 75922 76701 . - 0 ID=cds-WP_001324445.1;Parent=gene-AB25_RS10185;Dbxref=GenBank:WP_001324445.1;Name=WP_001324445.1;gbkey=CDS;gene=ygcR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417250.4;locus_tag=AB25_RS10185;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WP_001324445.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 76679 78088 . - . ID=gene-AB25_RS10180;Name=ygcS;gbkey=Gene;gene=ygcS;gene_biotype=protein_coding;locus_tag=AB25_RS10180;old_locus_tag=AB25_3144 NZ_JJMC01000052.1 Protein Homology CDS 76679 78088 . - 0 ID=cds-WP_000147666.1;Parent=gene-AB25_RS10180;Dbxref=GenBank:WP_000147666.1;Name=WP_000147666.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ygcS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708568.1;locus_tag=AB25_RS10180;product=MFS transporter;protein_id=WP_000147666.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 78110 79564 . - . ID=gene-AB25_RS10175;Name=ygcU;gbkey=Gene;gene=ygcU;gene_biotype=protein_coding;locus_tag=AB25_RS10175;old_locus_tag=AB25_3145 NZ_JJMC01000052.1 Protein Homology CDS 78110 79564 . - 0 ID=cds-WP_001392549.1;Parent=gene-AB25_RS10175;Dbxref=GenBank:WP_001392549.1;Name=WP_001392549.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;gene=ygcU;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311656.1;locus_tag=AB25_RS10175;product=FAD-binding oxidoreductase;protein_id=WP_001392549.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 79634 80419 . - . ID=gene-AB25_RS10170;Name=ygcW;gbkey=Gene;gene=ygcW;gene_biotype=protein_coding;locus_tag=AB25_RS10170;old_locus_tag=AB25_3146 NZ_JJMC01000052.1 Protein Homology CDS 79634 80419 . - 0 ID=cds-WP_000021330.1;Parent=gene-AB25_RS10170;Dbxref=GenBank:WP_000021330.1;Name=WP_000021330.1;gbkey=CDS;gene=ygcW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417254.4;locus_tag=AB25_RS10170;product=SDR family oxidoreductase;protein_id=WP_000021330.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 80738 82015 . + . ID=gene-AB25_RS10165;Name=yqcE;gbkey=Gene;gene=yqcE;gene_biotype=protein_coding;locus_tag=AB25_RS10165;old_locus_tag=AB25_3147 NZ_JJMC01000052.1 Protein Homology CDS 80738 82015 . + 0 ID=cds-WP_001164578.1;Parent=gene-AB25_RS10165;Dbxref=GenBank:WP_001164578.1;Name=WP_001164578.1;Ontology_term=GO:0055085,GO:0015112,GO:0022857;gbkey=CDS;gene=yqcE;go_function=nitrate transmembrane transporter activity|0015112||IEA,transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311658.1;locus_tag=AB25_RS10165;product=MFS transporter;protein_id=WP_001164578.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 82042 83520 . + . ID=gene-AB25_RS10160;Name=ygcE;gbkey=Gene;gene=ygcE;gene_biotype=protein_coding;locus_tag=AB25_RS10160;old_locus_tag=AB25_3148 NZ_JJMC01000052.1 Protein Homology CDS 82042 83520 . + 0 ID=cds-WP_000039683.1;Parent=gene-AB25_RS10160;Dbxref=GenBank:WP_000039683.1;Name=WP_000039683.1;Ontology_term=GO:0005975,GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;gene=ygcE;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417256.1;locus_tag=AB25_RS10160;product=FGGY-family carbohydrate kinase;protein_id=WP_000039683.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 84709 85380 . - . ID=gene-AB25_RS10155;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=AB25_RS10155;old_locus_tag=AB25_3150 NZ_JJMC01000052.1 Protein Homology CDS 84709 85380 . - 0 ID=cds-WP_001199979.1;Parent=gene-AB25_RS10155;Dbxref=GenBank:WP_001199979.1;Name=WP_001199979.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199960.1;locus_tag=AB25_RS10155;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_001199979.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 85519 85659 . + . ID=gene-AB25_RS10150;Name=yqcG;gbkey=Gene;gene=yqcG;gene_biotype=protein_coding;locus_tag=AB25_RS10150;old_locus_tag=AB25_3151 NZ_JJMC01000052.1 Protein Homology CDS 85519 85659 . + 0 ID=cds-WP_001288227.1;Parent=gene-AB25_RS10150;Dbxref=GenBank:WP_001288227.1;Name=WP_001288227.1;gbkey=CDS;gene=yqcG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791252.1;locus_tag=AB25_RS10150;product=cell envelope stress response protein YqcG;protein_id=WP_001288227.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 85673 86545 . + . ID=gene-AB25_RS10145;Name=ygcG;gbkey=Gene;gene=ygcG;gene_biotype=protein_coding;locus_tag=AB25_RS10145;old_locus_tag=AB25_3152 NZ_JJMC01000052.1 Protein Homology CDS 85673 86545 . + 0 ID=cds-WP_001268446.1;Parent=gene-AB25_RS10145;Dbxref=GenBank:WP_001268446.1;Name=WP_001268446.1;Ontology_term=GO:0016791;gbkey=CDS;gene=ygcG;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417258.4;locus_tag=AB25_RS10145;product=TPM domain-containing protein;protein_id=WP_001268446.1;transl_table=11 NZ_JJMC01000052.1 RefSeq gene 86643 87968 . + . ID=gene-AB25_RS10140;Name=AB25_RS10140;end_range=87968,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS10140;old_locus_tag=AB25_3153;partial=true NZ_JJMC01000052.1 Protein Homology CDS 86643 87968 . + 0 ID=cds-WP_032296095.1;Parent=gene-AB25_RS10140;Dbxref=GenBank:WP_032296095.1;Name=WP_032296095.1;Ontology_term=GO:0006313,GO:0004803;end_range=87968,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707145.1;locus_tag=AB25_RS10140;partial=true;product=IS4 family transposase;protein_id=WP_032296095.1;transl_table=11 ##sequence-region NZ_JJMC01000053.1 1 4582 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000053.1 RefSeq region 1 4582 . + . ID=NZ_JJMC01000053.1:1..4582;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000053.1 RefSeq gene 1 271 . - . ID=gene-AB25_RS10135;Name=AB25_RS10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS10135;old_locus_tag=AB25_3154;partial=true;start_range=.,1 NZ_JJMC01000053.1 Protein Homology CDS 1 271 . - 0 ID=cds-WP_000019387.1;Parent=gene-AB25_RS10135;Dbxref=GenBank:WP_000019387.1;Name=WP_000019387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AB25_RS10135;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_000019387.1;start_range=.,1;transl_table=11 NZ_JJMC01000053.1 RefSeq gene 680 1537 . - . ID=gene-AB25_RS10130;Name=sitD;gbkey=Gene;gene=sitD;gene_biotype=protein_coding;locus_tag=AB25_RS10130;old_locus_tag=AB25_3155 NZ_JJMC01000053.1 Protein Homology CDS 680 1537 . - 0 ID=cds-WP_032171367.1;Parent=gene-AB25_RS10130;Dbxref=GenBank:WP_032171367.1;Name=WP_032171367.1;gbkey=CDS;gene=sitD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707259.1;locus_tag=AB25_RS10130;product=iron/manganese ABC transporter permease subunit SitD;protein_id=WP_032171367.1;transl_table=11 NZ_JJMC01000053.1 RefSeq gene 1534 2391 . - . ID=gene-AB25_RS10125;Name=sitC;gbkey=Gene;gene=sitC;gene_biotype=protein_coding;locus_tag=AB25_RS10125;old_locus_tag=AB25_3156 NZ_JJMC01000053.1 Protein Homology CDS 1534 2391 . - 0 ID=cds-WP_001101728.1;Parent=gene-AB25_RS10125;Dbxref=GenBank:WP_001101728.1;Name=WP_001101728.1;gbkey=CDS;gene=sitC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707260.1;locus_tag=AB25_RS10125;product=iron/manganese ABC transporter permease subunit SitC;protein_id=WP_001101728.1;transl_table=11 NZ_JJMC01000053.1 RefSeq gene 2388 3215 . - . ID=gene-AB25_RS10120;Name=sitB;gbkey=Gene;gene=sitB;gene_biotype=protein_coding;locus_tag=AB25_RS10120;old_locus_tag=AB25_3157 NZ_JJMC01000053.1 Protein Homology CDS 2388 3215 . - 0 ID=cds-WP_000983721.1;Parent=gene-AB25_RS10120;Dbxref=GenBank:WP_000983721.1;Name=WP_000983721.1;gbkey=CDS;gene=sitB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707261.1;locus_tag=AB25_RS10120;product=iron/manganese ABC transporter ATP-binding protein SitB;protein_id=WP_000983721.1;transl_table=11 NZ_JJMC01000053.1 RefSeq gene 3215 4129 . - . ID=gene-AB25_RS10115;Name=sitA;gbkey=Gene;gene=sitA;gene_biotype=protein_coding;locus_tag=AB25_RS10115;old_locus_tag=AB25_3158 NZ_JJMC01000053.1 Protein Homology CDS 3215 4129 . - 0 ID=cds-WP_012643999.1;Parent=gene-AB25_RS10115;Dbxref=GenBank:WP_012643999.1;Name=WP_012643999.1;gbkey=CDS;gene=sitA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000949004.1;locus_tag=AB25_RS10115;product=iron/manganese ABC transporter substrate-binding protein SitA;protein_id=WP_012643999.1;transl_table=11 NZ_JJMC01000053.1 RefSeq gene 4485 4582 . + . ID=gene-AB25_RS28665;Name=AB25_RS28665;end_range=4582,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS28665;old_locus_tag=AB25_3159;partial=true NZ_JJMC01000053.1 Protein Homology CDS 4485 4582 . + 0 ID=cds-WP_001413871.1;Parent=gene-AB25_RS28665;Dbxref=GenBank:WP_001413871.1;Name=WP_001413871.1;Ontology_term=GO:0006313;end_range=4582,.;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AB25_RS28665;partial=true;product=IS1 family transposase;protein_id=WP_001413871.1;transl_table=11 ##sequence-region NZ_JJMC01000054.1 1 18991 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000054.1 RefSeq region 1 18991 . + . ID=NZ_JJMC01000054.1:1..18991;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000054.1 RefSeq pseudogene 1 585 . + . ID=gene-AB25_RS30495;Name=AB25_RS30495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS30495;old_locus_tag=AB25_3160;partial=true;pseudo=true;start_range=.,1 NZ_JJMC01000054.1 Protein Homology CDS 1 585 . + 1 ID=cds-AB25_RS30495;Parent=gene-AB25_RS30495;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB25_RS30495;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJMC01000054.1 RefSeq pseudogene 765 1278 . - . ID=gene-AB25_RS0125825;Name=AB25_RS0125825;end_range=1278,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS0125825;partial=true;pseudo=true NZ_JJMC01000054.1 Protein Homology CDS 765 1278 . - 0 ID=cds-AB25_RS0125825;Parent=gene-AB25_RS0125825;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1278,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001566943.1;locus_tag=AB25_RS0125825;partial=true;product=DUF4113 domain-containing protein;pseudo=true;transl_table=11 NZ_JJMC01000054.1 RefSeq pseudogene 1339 1446 . - . ID=gene-AB25_RS32020;Name=AB25_RS32020;end_range=1446,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32020;partial=true;pseudo=true NZ_JJMC01000054.1 Protein Homology CDS 1339 1446 . - 0 ID=cds-AB25_RS32020;Parent=gene-AB25_RS32020;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1446,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000544830.1;locus_tag=AB25_RS32020;partial=true;product=AAA family ATPase;pseudo=true;transl_table=11 NZ_JJMC01000054.1 RefSeq pseudogene 1439 1768 . - . ID=gene-AB25_RS0125830;Name=AB25_RS0125830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS0125830;partial=true;pseudo=true;start_range=.,1439 NZ_JJMC01000054.1 Protein Homology CDS 1439 1768 . - 0 ID=cds-AB25_RS0125830;Parent=gene-AB25_RS0125830;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000952428.1;locus_tag=AB25_RS0125830;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1439;transl_table=11 NZ_JJMC01000054.1 RefSeq gene 2511 3488 . + . ID=gene-AB25_RS10100;Name=AB25_RS10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS10100;old_locus_tag=AB25_3164 NZ_JJMC01000054.1 Protein Homology CDS 2511 3488 . + 0 ID=cds-WP_032171129.1;Parent=gene-AB25_RS10100;Dbxref=GenBank:WP_032171129.1;Name=WP_032171129.1;Ontology_term=GO:0006270,GO:0003887;gbkey=CDS;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052630.2;locus_tag=AB25_RS10100;product=RepB family plasmid replication initiator protein;protein_id=WP_032171129.1;transl_table=11 NZ_JJMC01000054.1 RefSeq gene 3773 4513 . - . ID=gene-AB25_RS10095;Name=AB25_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS10095;old_locus_tag=AB25_3165 NZ_JJMC01000054.1 Protein Homology CDS 3773 4513 . - 0 ID=cds-WP_001066953.1;Parent=gene-AB25_RS10095;Dbxref=GenBank:WP_001066953.1;Name=WP_001066953.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052628.1;locus_tag=AB25_RS10095;product=tyrosine-type recombinase/integrase;protein_id=WP_001066953.1;transl_table=11 NZ_JJMC01000054.1 RefSeq gene 4634 4816 . - . ID=gene-AB25_RS31255;Name=AB25_RS31255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31255 NZ_JJMC01000054.1 Protein Homology CDS 4634 4816 . - 0 ID=cds-WP_042344623.1;Parent=gene-AB25_RS31255;Dbxref=GenBank:WP_042344623.1;Name=WP_042344623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001325179.1;locus_tag=AB25_RS31255;product=hypothetical protein;protein_id=WP_042344623.1;transl_table=11 NZ_JJMC01000054.1 RefSeq pseudogene 4883 5172 . - . ID=gene-AB25_RS32495;Name=AB25_RS32495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32495;pseudo=true NZ_JJMC01000054.1 Protein Homology CDS 4883 5172 . - 0 ID=cds-AB25_RS32495;Parent=gene-AB25_RS32495;Note=frameshifted%3B internal stop;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001532579.1;locus_tag=AB25_RS32495;product=type II toxin-antitoxin system RelE/ParE family toxin;pseudo=true;transl_table=11 NZ_JJMC01000054.1 RefSeq pseudogene 5159 5427 . - . ID=gene-AB25_RS28685;Name=AB25_RS28685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS28685;pseudo=true NZ_JJMC01000054.1 Protein Homology CDS 5159 5427 . - 0 ID=cds-AB25_RS28685;Parent=gene-AB25_RS28685;Note=frameshifted;Ontology_term=GO:0051983;gbkey=CDS;go_process=regulation of chromosome segregation|0051983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441118.1;locus_tag=AB25_RS28685;product=type II toxin-antitoxin system ParD family antitoxin;pseudo=true;transl_table=11 NZ_JJMC01000054.1 RefSeq gene 5959 7128 . + . ID=gene-AB25_RS10090;Name=AB25_RS10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS10090;old_locus_tag=AB25_3166 NZ_JJMC01000054.1 Protein Homology CDS 5959 7128 . + 0 ID=cds-WP_001072355.1;Parent=gene-AB25_RS10090;Dbxref=GenBank:WP_001072355.1;Name=WP_001072355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001072358.1;locus_tag=AB25_RS10090;product=hypothetical protein;protein_id=WP_001072355.1;transl_table=11 NZ_JJMC01000054.1 RefSeq pseudogene 7161 7289 . + . ID=gene-AB25_RS31260;Name=AB25_RS31260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS31260;partial=true;pseudo=true;start_range=.,7161 NZ_JJMC01000054.1 Protein Homology CDS 7161 7289 . + 0 ID=cds-AB25_RS31260;Parent=gene-AB25_RS31260;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=AB25_RS31260;partial=true;product=IS481 family transposase;pseudo=true;start_range=.,7161;transl_table=11 NZ_JJMC01000054.1 RefSeq pseudogene 7414 7617 . - . ID=gene-AB25_RS10085;Name=AB25_RS10085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS10085;old_locus_tag=AB25_3167;partial=true;pseudo=true;start_range=.,7414 NZ_JJMC01000054.1 Protein Homology CDS 7414 7617 . - 0 ID=cds-AB25_RS10085;Parent=gene-AB25_RS10085;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052678.1;locus_tag=AB25_RS10085;partial=true;product=hypothetical protein;pseudo=true;start_range=.,7414;transl_table=11 NZ_JJMC01000054.1 RefSeq gene 7723 7998 . - . ID=gene-AB25_RS10080;Name=AB25_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS10080;old_locus_tag=AB25_3168 NZ_JJMC01000054.1 Protein Homology CDS 7723 7998 . - 0 ID=cds-WP_000421272.1;Parent=gene-AB25_RS10080;Dbxref=GenBank:WP_000421272.1;Name=WP_000421272.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052677.1;locus_tag=AB25_RS10080;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_000421272.1;transl_table=11 NZ_JJMC01000054.1 RefSeq gene 7998 8282 . - . ID=gene-AB25_RS10075;Name=AB25_RS10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS10075;old_locus_tag=AB25_3169 NZ_JJMC01000054.1 Protein Homology CDS 7998 8282 . - 0 ID=cds-WP_001387467.1;Parent=gene-AB25_RS10075;Dbxref=GenBank:WP_001387467.1;Name=WP_001387467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052676.1;locus_tag=AB25_RS10075;product=CopG family ribbon-helix-helix protein;protein_id=WP_001387467.1;transl_table=11 NZ_JJMC01000054.1 RefSeq gene 8887 9639 . + . ID=gene-AB25_RS10070;Name=AB25_RS10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS10070;old_locus_tag=AB25_3170 NZ_JJMC01000054.1 Protein Homology CDS 8887 9639 . + 0 ID=cds-WP_000562172.1;Parent=gene-AB25_RS10070;Dbxref=GenBank:WP_000562172.1;Name=WP_000562172.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000562172.1;locus_tag=AB25_RS10070;product=IclR family transcriptional regulator;protein_id=WP_000562172.1;transl_table=11 NZ_JJMC01000054.1 RefSeq gene 9685 10650 . - . ID=gene-AB25_RS10065;Name=kdgT;gbkey=Gene;gene=kdgT;gene_biotype=protein_coding;locus_tag=AB25_RS10065;old_locus_tag=AB25_3171 NZ_JJMC01000054.1 Protein Homology CDS 9685 10650 . - 0 ID=cds-WP_001022265.1;Parent=gene-AB25_RS10065;Dbxref=GenBank:WP_001022265.1;Name=WP_001022265.1;Ontology_term=GO:0046411,GO:0015649,GO:0016020;gbkey=CDS;gene=kdgT;go_component=membrane|0016020||IEA;go_function=2-keto-3-deoxygluconate:proton symporter activity|0015649||IEA;go_process=2-keto-3-deoxygluconate transmembrane transport|0046411||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001022265.1;locus_tag=AB25_RS10065;product=2-keto-3-deoxygluconate transporter;protein_id=WP_001022265.1;transl_table=11 NZ_JJMC01000054.1 RefSeq gene 10683 11063 . - . ID=gene-AB25_RS10060;Name=AB25_RS10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS10060;old_locus_tag=AB25_3172 NZ_JJMC01000054.1 Protein Homology CDS 10683 11063 . - 0 ID=cds-WP_000710783.1;Parent=gene-AB25_RS10060;Dbxref=GenBank:WP_000710783.1;Name=WP_000710783.1;Ontology_term=GO:0008152,GO:0019239;gbkey=CDS;go_function=deaminase activity|0019239||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001403366.1;locus_tag=AB25_RS10060;product=Rid family detoxifying hydrolase;protein_id=WP_000710783.1;transl_table=11 NZ_JJMC01000054.1 RefSeq gene 11088 11978 . - . ID=gene-AB25_RS10055;Name=AB25_RS10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS10055;old_locus_tag=AB25_3173 NZ_JJMC01000054.1 Protein Homology CDS 11088 11978 . - 0 ID=cds-WP_001077068.1;Parent=gene-AB25_RS10055;Dbxref=GenBank:WP_001077068.1;Name=WP_001077068.1;Ontology_term=GO:0071704,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=obsolete organic substance metabolic process|0071704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001077068.1;locus_tag=AB25_RS10055;product=dihydrodipicolinate synthase family protein;protein_id=WP_001077068.1;transl_table=11 NZ_JJMC01000054.1 RefSeq pseudogene 12235 12344 . - . ID=gene-AB25_RS32990;Name=AB25_RS32990;end_range=12344,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32990;partial=true;pseudo=true;start_range=.,12235 NZ_JJMC01000054.1 Protein Homology CDS 12235 12344 . - 0 ID=cds-AB25_RS32990;Parent=gene-AB25_RS32990;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=12344,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463351.1;locus_tag=AB25_RS32990;partial=true;product=hypothetical protein;pseudo=true;start_range=.,12235;transl_table=11 NZ_JJMC01000054.1 RefSeq pseudogene 12340 12819 . + . ID=gene-AB25_RS0125860;Name=AB25_RS0125860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS0125860;partial=true;pseudo=true;start_range=.,12340 NZ_JJMC01000054.1 Protein Homology CDS 12340 12819 . + 0 ID=cds-AB25_RS0125860;Parent=gene-AB25_RS0125860;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463346.1;locus_tag=AB25_RS0125860;partial=true;product=zinc-binding dehydrogenase;pseudo=true;start_range=.,12340;transl_table=11 NZ_JJMC01000054.1 RefSeq gene 12950 13828 . + . ID=gene-AB25_RS10045;Name=AB25_RS10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS10045;old_locus_tag=AB25_3177 NZ_JJMC01000054.1 Protein Homology CDS 12950 13828 . + 0 ID=cds-WP_000338039.1;Parent=gene-AB25_RS10045;Dbxref=GenBank:WP_000338039.1;Name=WP_000338039.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224836.1;locus_tag=AB25_RS10045;product=carbohydrate ABC transporter permease;protein_id=WP_000338039.1;transl_table=11 NZ_JJMC01000054.1 RefSeq gene 13818 14705 . + . ID=gene-AB25_RS10040;Name=AB25_RS10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS10040;old_locus_tag=AB25_3178 NZ_JJMC01000054.1 Protein Homology CDS 13818 14705 . + 0 ID=cds-WP_001271561.1;Parent=gene-AB25_RS10040;Dbxref=GenBank:WP_001271561.1;Name=WP_001271561.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224835.1;locus_tag=AB25_RS10040;product=carbohydrate ABC transporter permease;protein_id=WP_001271561.1;transl_table=11 NZ_JJMC01000054.1 RefSeq gene 14716 15540 . + . ID=gene-AB25_RS10035;Name=AB25_RS10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS10035;old_locus_tag=AB25_3179 NZ_JJMC01000054.1 Protein Homology CDS 14716 15540 . + 0 ID=cds-WP_000922702.1;Parent=gene-AB25_RS10035;Dbxref=GenBank:WP_000922702.1;Name=WP_000922702.1;Ontology_term=GO:0004112;gbkey=CDS;go_function=cyclic-nucleotide phosphodiesterase activity|0004112||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224834.1;locus_tag=AB25_RS10035;product=phosphodiesterase;protein_id=WP_000922702.1;transl_table=11 NZ_JJMC01000054.1 RefSeq gene 15546 16619 . + . ID=gene-AB25_RS10030;Name=AB25_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS10030;old_locus_tag=AB25_3180 NZ_JJMC01000054.1 Protein Homology CDS 15546 16619 . + 0 ID=cds-WP_000950177.1;Parent=gene-AB25_RS10030;Dbxref=GenBank:WP_000950177.1;Name=WP_000950177.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224833.1;locus_tag=AB25_RS10030;product=ABC transporter ATP-binding protein;protein_id=WP_000950177.1;transl_table=11 NZ_JJMC01000054.1 RefSeq gene 16612 17922 . + . ID=gene-AB25_RS10025;Name=AB25_RS10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS10025;old_locus_tag=AB25_3181 NZ_JJMC01000054.1 Protein Homology CDS 16612 17922 . + 0 ID=cds-WP_000476108.1;Parent=gene-AB25_RS10025;Dbxref=GenBank:WP_000476108.1;Name=WP_000476108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224832.1;locus_tag=AB25_RS10025;product=ABC transporter substrate-binding protein;protein_id=WP_000476108.1;transl_table=11 NZ_JJMC01000054.1 RefSeq pseudogene 17981 18289 . - . ID=gene-AB25_RS10020;Name=AB25_RS10020;end_range=18289,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS10020;old_locus_tag=AB25_3182;partial=true;pseudo=true NZ_JJMC01000054.1 Protein Homology CDS 17981 18289 . - 0 ID=cds-AB25_RS10020;Parent=gene-AB25_RS10020;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=18289,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000244358.1;locus_tag=AB25_RS10020;partial=true;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_JJMC01000054.1 RefSeq pseudogene 18366 18584 . - . ID=gene-AB25_RS28695;Name=AB25_RS28695;end_range=18584,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS28695;partial=true;pseudo=true NZ_JJMC01000054.1 Protein Homology CDS 18366 18584 . - 0 ID=cds-AB25_RS28695;Parent=gene-AB25_RS28695;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=18584,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013676.6;locus_tag=AB25_RS28695;partial=true;product=Tn3 family transposase;pseudo=true;transl_table=11 NZ_JJMC01000054.1 RefSeq gene 18621 18991 . - . ID=gene-AB25_RS10015;Name=AB25_RS10015;end_range=18991,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS10015;old_locus_tag=AB25_3183;partial=true NZ_JJMC01000054.1 Protein Homology CDS 18621 18991 . - 2 ID=cds-WP_032296097.1;Parent=gene-AB25_RS10015;Dbxref=GenBank:WP_032296097.1;Name=WP_032296097.1;Ontology_term=GO:0015074;end_range=18991,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AB25_RS10015;partial=true;product=integrase core domain-containing protein;protein_id=WP_032296097.1;transl_table=11 ##sequence-region NZ_JJMC01000055.1 1 433576 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000055.1 RefSeq region 1 433576 . + . ID=NZ_JJMC01000055.1:1..433576;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000055.1 RefSeq gene 64 1410 . + . ID=gene-AB25_RS10010;Name=AB25_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS10010;old_locus_tag=AB25_3184 NZ_JJMC01000055.1 Protein Homology CDS 64 1410 . + 0 ID=cds-WP_000483767.1-2;Parent=gene-AB25_RS10010;Dbxref=GenBank:WP_000483767.1;Name=WP_000483767.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707145.1;locus_tag=AB25_RS10010;product=IS4-like element IS4 family transposase;protein_id=WP_000483767.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 1465 2763 . - . ID=gene-AB25_RS10005;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=AB25_RS10005;old_locus_tag=AB25_3185 NZ_JJMC01000055.1 Protein Homology CDS 1465 2763 . - 0 ID=cds-WP_000036723.1;Parent=gene-AB25_RS10005;Dbxref=GenBank:WP_000036723.1;Name=WP_000036723.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311666.1;locus_tag=AB25_RS10005;product=phosphopyruvate hydratase;protein_id=WP_000036723.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 2851 4488 . - . ID=gene-AB25_RS10000;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=AB25_RS10000;old_locus_tag=AB25_3186 NZ_JJMC01000055.1 Protein Homology CDS 2851 4488 . - 0 ID=cds-WP_000210878.1;Parent=gene-AB25_RS10000;Dbxref=GenBank:WP_000210878.1;Name=WP_000210878.1;Ontology_term=GO:0006221,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=AB25_RS10000;product=glutamine hydrolyzing CTP synthase;protein_id=WP_000210878.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 4716 5507 . - . ID=gene-AB25_RS09995;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=AB25_RS09995;old_locus_tag=AB25_3187 NZ_JJMC01000055.1 Protein Homology CDS 4716 5507 . - 0 ID=cds-WP_001071648.1;Parent=gene-AB25_RS09995;Dbxref=GenBank:WP_001071648.1;Name=WP_001071648.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311668.1;locus_tag=AB25_RS09995;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_001071648.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 5578 5913 . - . ID=gene-AB25_RS09990;Name=mazF;gbkey=Gene;gene=mazF;gene_biotype=protein_coding;locus_tag=AB25_RS09990;old_locus_tag=AB25_3188 NZ_JJMC01000055.1 Protein Homology CDS 5578 5913 . - 0 ID=cds-WP_000254738.1;Parent=gene-AB25_RS09990;Dbxref=GenBank:WP_000254738.1;Name=WP_000254738.1;gbkey=CDS;gene=mazF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311669.1;locus_tag=AB25_RS09990;product=endoribonuclease MazF;protein_id=WP_000254738.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 5913 6161 . - . ID=gene-AB25_RS09985;Name=mazE;gbkey=Gene;gene=mazE;gene_biotype=protein_coding;locus_tag=AB25_RS09985;old_locus_tag=AB25_3189 NZ_JJMC01000055.1 Protein Homology CDS 5913 6161 . - 0 ID=cds-WP_000581937.1;Parent=gene-AB25_RS09985;Dbxref=GenBank:WP_000581937.1;Name=WP_000581937.1;gbkey=CDS;gene=mazE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311670.1;locus_tag=AB25_RS09985;product=type II toxin-antitoxin system antitoxin MazE;protein_id=WP_000581937.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 6239 8473 . - . ID=gene-AB25_RS09980;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=AB25_RS09980;old_locus_tag=AB25_3190 NZ_JJMC01000055.1 Protein Homology CDS 6239 8473 . - 0 ID=cds-WP_000226815.1;Parent=gene-AB25_RS09980;Dbxref=GenBank:WP_000226815.1;Name=WP_000226815.1;Ontology_term=GO:0015969;gbkey=CDS;gene=relA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311671.1;locus_tag=AB25_RS09980;product=GTP diphosphokinase;protein_id=WP_000226815.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 8521 9822 . - . ID=gene-AB25_RS09975;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=AB25_RS09975;old_locus_tag=AB25_3191 NZ_JJMC01000055.1 Protein Homology CDS 8521 9822 . - 0 ID=cds-WP_000046812.1;Parent=gene-AB25_RS09975;Dbxref=GenBank:WP_000046812.1;Name=WP_000046812.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417265.1;locus_tag=AB25_RS09975;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_000046812.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 9879 12635 . + . ID=gene-AB25_RS09970;Name=barA;gbkey=Gene;gene=barA;gene_biotype=protein_coding;locus_tag=AB25_RS09970;old_locus_tag=AB25_3192 NZ_JJMC01000055.1 Protein Homology CDS 9879 12635 . + 0 ID=cds-WP_000186448.1;Parent=gene-AB25_RS09970;Dbxref=GenBank:WP_000186448.1;Name=WP_000186448.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=barA;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311673.1;locus_tag=AB25_RS09970;product=two-component sensor histidine kinase BarA;protein_id=WP_000186448.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 12867 14207 . - . ID=gene-AB25_RS09965;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=protein_coding;locus_tag=AB25_RS09965;old_locus_tag=AB25_3194 NZ_JJMC01000055.1 Protein Homology CDS 12867 14207 . - 0 ID=cds-WP_000098234.1;Parent=gene-AB25_RS09965;Dbxref=GenBank:WP_000098234.1;Name=WP_000098234.1;Ontology_term=GO:0019394,GO:0000287,GO:0008872;gbkey=CDS;gene=gudD;go_function=magnesium ion binding|0000287||IEA,glucarate dehydratase activity|0008872||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311674.1;locus_tag=AB25_RS09965;product=glucarate dehydratase;protein_id=WP_000098234.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 14228 15568 . - . ID=gene-AB25_RS09960;Name=gudX;gbkey=Gene;gene=gudX;gene_biotype=protein_coding;locus_tag=AB25_RS09960;old_locus_tag=AB25_3195 NZ_JJMC01000055.1 Protein Homology CDS 14228 15568 . - 0 ID=cds-WP_000211757.1;Parent=gene-AB25_RS09960;Dbxref=GenBank:WP_000211757.1;Name=WP_000211757.1;gbkey=CDS;gene=gudX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708582.2;locus_tag=AB25_RS09960;product=enolase C-terminal domain-like protein;protein_id=WP_000211757.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 15570 16922 . - . ID=gene-AB25_RS09955;Name=gudP;gbkey=Gene;gene=gudP;gene_biotype=protein_coding;locus_tag=AB25_RS09955;old_locus_tag=AB25_3196 NZ_JJMC01000055.1 Protein Homology CDS 15570 16922 . - 0 ID=cds-WP_000097082.1;Parent=gene-AB25_RS09955;Dbxref=GenBank:WP_000097082.1;Name=WP_000097082.1;gbkey=CDS;gene=gudP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417269.1;locus_tag=AB25_RS09955;product=galactarate/glucarate/glycerate transporter GudP;protein_id=WP_000097082.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 17357 17806 . - . ID=gene-AB25_RS09950;Name=yqcA;gbkey=Gene;gene=yqcA;gene_biotype=protein_coding;locus_tag=AB25_RS09950;old_locus_tag=AB25_3198 NZ_JJMC01000055.1 Protein Homology CDS 17357 17806 . - 0 ID=cds-WP_000807750.1;Parent=gene-AB25_RS09950;Dbxref=GenBank:WP_000807750.1;Name=WP_000807750.1;Ontology_term=GO:0010181;gbkey=CDS;gene=yqcA;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311677.1;locus_tag=AB25_RS09950;product=flavodoxin;protein_id=WP_000807750.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 17824 18606 . - . ID=gene-AB25_RS09945;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=AB25_RS09945;old_locus_tag=AB25_3199 NZ_JJMC01000055.1 Protein Homology CDS 17824 18606 . - 0 ID=cds-WP_000890008.1;Parent=gene-AB25_RS09945;Dbxref=GenBank:WP_000890008.1;Name=WP_000890008.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=truC;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417271.1;locus_tag=AB25_RS09945;product=tRNA pseudouridine(65) synthase TruC;protein_id=WP_000890008.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 18606 18935 . - . ID=gene-AB25_RS09940;Name=yqcC;gbkey=Gene;gene=yqcC;gene_biotype=protein_coding;locus_tag=AB25_RS09940;old_locus_tag=AB25_3200 NZ_JJMC01000055.1 Protein Homology CDS 18606 18935 . - 0 ID=cds-WP_000206990.1;Parent=gene-AB25_RS09940;Dbxref=GenBank:WP_000206990.1;Name=WP_000206990.1;gbkey=CDS;gene=yqcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417272.1;locus_tag=AB25_RS09940;product=YqcC family protein;protein_id=WP_000206990.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 19557 20102 . - . ID=gene-AB25_RS09935;Name=syd;gbkey=Gene;gene=syd;gene_biotype=protein_coding;locus_tag=AB25_RS09935;old_locus_tag=AB25_3201 NZ_JJMC01000055.1 Protein Homology CDS 19557 20102 . - 0 ID=cds-WP_000342431.1;Parent=gene-AB25_RS09935;Dbxref=GenBank:WP_000342431.1;Name=WP_000342431.1;Ontology_term=GO:0009898;gbkey=CDS;gene=syd;go_component=cytoplasmic side of plasma membrane|0009898||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417273.1;locus_tag=AB25_RS09935;product=SecY-interacting protein;protein_id=WP_000342431.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 20170 21018 . + . ID=gene-AB25_RS09930;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=AB25_RS09930;old_locus_tag=AB25_3202 NZ_JJMC01000055.1 Protein Homology CDS 20170 21018 . + 0 ID=cds-WP_000100430.1;Parent=gene-AB25_RS09930;Dbxref=GenBank:WP_000100430.1;Name=WP_000100430.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708588.1;locus_tag=AB25_RS09930;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_000100430.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 21130 22494 . + . ID=gene-AB25_RS09925;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=AB25_RS09925;old_locus_tag=AB25_3203 NZ_JJMC01000055.1 Protein Homology CDS 21130 22494 . + 0 ID=cds-WP_032296099.1;Parent=gene-AB25_RS09925;Dbxref=GenBank:WP_032296099.1;Name=WP_032296099.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311682.1;locus_tag=AB25_RS09925;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=WP_032296099.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 23051 24340 . + . ID=gene-AB25_RS09920;Name=sdaC;gbkey=Gene;gene=sdaC;gene_biotype=protein_coding;locus_tag=AB25_RS09920;old_locus_tag=AB25_3204 NZ_JJMC01000055.1 Protein Homology CDS 23051 24340 . + 0 ID=cds-WP_000450476.1;Parent=gene-AB25_RS09920;Dbxref=GenBank:WP_000450476.1;Name=WP_000450476.1;gbkey=CDS;gene=sdaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311683.1;locus_tag=AB25_RS09920;product=HAAAP family serine/threonine permease SdaC;protein_id=WP_000450476.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 24398 25765 . + . ID=gene-AB25_RS09915;Name=sdaB;gbkey=Gene;gene=sdaB;gene_biotype=protein_coding;locus_tag=AB25_RS09915;old_locus_tag=AB25_3205 NZ_JJMC01000055.1 Protein Homology CDS 24398 25765 . + 0 ID=cds-WP_000626396.1;Parent=gene-AB25_RS09915;Dbxref=GenBank:WP_000626396.1;Name=WP_000626396.1;gbkey=CDS;gene=sdaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708592.1;locus_tag=AB25_RS09915;product=L-serine ammonia-lyase II;protein_id=WP_000626396.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 25877 26632 . + . ID=gene-AB25_RS09910;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=AB25_RS09910;old_locus_tag=AB25_3206 NZ_JJMC01000055.1 Protein Homology CDS 25877 26632 . + 0 ID=cds-WP_001374788.1;Parent=gene-AB25_RS09910;Dbxref=GenBank:WP_001374788.1;Name=WP_001374788.1;Ontology_term=GO:0033567,GO:0003677,GO:0017108;gbkey=CDS;gene=xni;go_function=DNA binding|0003677||IEA,5'-flap endonuclease activity|0017108||IEA;go_process=DNA replication%2C Okazaki fragment processing|0033567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417278.4;locus_tag=AB25_RS09910;product=flap endonuclease Xni;protein_id=WP_001374788.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 26687 27835 . - . ID=gene-AB25_RS09905;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=AB25_RS09905;old_locus_tag=AB25_3207 NZ_JJMC01000055.1 Protein Homology CDS 26687 27835 . - 0 ID=cds-WP_000013588.1;Parent=gene-AB25_RS09905;Dbxref=GenBank:WP_000013588.1;Name=WP_000013588.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fucO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417279.2;locus_tag=AB25_RS09905;product=lactaldehyde reductase;protein_id=WP_000013588.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 27863 28510 . - . ID=gene-AB25_RS09900;Name=fucA;gbkey=Gene;gene=fucA;gene_biotype=protein_coding;locus_tag=AB25_RS09900;old_locus_tag=AB25_3208 NZ_JJMC01000055.1 Protein Homology CDS 27863 28510 . - 0 ID=cds-WP_000440775.1;Parent=gene-AB25_RS09900;Dbxref=GenBank:WP_000440775.1;Name=WP_000440775.1;Ontology_term=GO:0006004,GO:0008270,GO:0008738;gbkey=CDS;gene=fucA;go_function=zinc ion binding|0008270||IEA,L-fuculose-phosphate aldolase activity|0008738||IEA;go_process=fucose metabolic process|0006004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311687.1;locus_tag=AB25_RS09900;product=L-fuculose-phosphate aldolase;protein_id=WP_000440775.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 29058 30374 . + . ID=gene-AB25_RS09895;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=AB25_RS09895;old_locus_tag=AB25_3209 NZ_JJMC01000055.1 Protein Homology CDS 29058 30374 . + 0 ID=cds-WP_000528603.1;Parent=gene-AB25_RS09895;Dbxref=GenBank:WP_000528603.1;Name=WP_000528603.1;Ontology_term=GO:0015756,GO:0015150;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417281.1;locus_tag=AB25_RS09895;product=L-fucose:H+ symporter permease;protein_id=WP_000528603.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 30407 32182 . + . ID=gene-AB25_RS09890;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=AB25_RS09890;old_locus_tag=AB25_3210 NZ_JJMC01000055.1 Protein Homology CDS 30407 32182 . + 0 ID=cds-WP_032171172.1;Parent=gene-AB25_RS09890;Dbxref=GenBank:WP_032171172.1;Name=WP_032171172.1;Ontology_term=GO:0019317,GO:0008736,GO:0030145,GO:0005737;gbkey=CDS;gene=fucI;go_component=cytoplasm|0005737||IEA;go_function=L-fucose isomerase activity|0008736||IEA,manganese ion binding|0030145||IEA;go_process=fucose catabolic process|0019317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417282.1;locus_tag=AB25_RS09890;product=L-fucose isomerase;protein_id=WP_032171172.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 32291 33709 . + . ID=gene-AB25_RS09885;Name=fucK;gbkey=Gene;gene=fucK;gene_biotype=protein_coding;locus_tag=AB25_RS09885;old_locus_tag=AB25_3211 NZ_JJMC01000055.1 Protein Homology CDS 32291 33709 . + 0 ID=cds-WP_000808373.1;Parent=gene-AB25_RS09885;Dbxref=GenBank:WP_000808373.1;Name=WP_000808373.1;Ontology_term=GO:0042355,GO:0008737;gbkey=CDS;gene=fucK;go_function=L-fuculokinase activity|0008737||IEA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417283.2;locus_tag=AB25_RS09885;product=L-fuculokinase;protein_id=WP_000808373.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 33711 34133 . + . ID=gene-AB25_RS09880;Name=fucU;gbkey=Gene;gene=fucU;gene_biotype=protein_coding;locus_tag=AB25_RS09880;old_locus_tag=AB25_3212 NZ_JJMC01000055.1 Protein Homology CDS 33711 34133 . + 0 ID=cds-WP_000920840.1;Parent=gene-AB25_RS09880;Dbxref=GenBank:WP_000920840.1;Name=WP_000920840.1;Ontology_term=GO:0042354,GO:0016854,GO:0042806;gbkey=CDS;gene=fucU;go_function=racemase and epimerase activity|0016854||IEA,fucose binding|0042806||IEA;go_process=L-fucose metabolic process|0042354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311691.1;locus_tag=AB25_RS09880;product=L-fucose mutarotase;protein_id=WP_000920840.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 34191 34922 . + . ID=gene-AB25_RS09875;Name=fucR;gbkey=Gene;gene=fucR;gene_biotype=protein_coding;locus_tag=AB25_RS09875;old_locus_tag=AB25_3213 NZ_JJMC01000055.1 Protein Homology CDS 34191 34922 . + 0 ID=cds-WP_000642344.1;Parent=gene-AB25_RS09875;Dbxref=GenBank:WP_000642344.1;Name=WP_000642344.1;gbkey=CDS;gene=fucR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417285.1;locus_tag=AB25_RS09875;product=L-fucose operon activator;protein_id=WP_000642344.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 34966 36066 . - . ID=gene-AB25_RS09870;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=AB25_RS09870;old_locus_tag=AB25_3214 NZ_JJMC01000055.1 Protein Homology CDS 34966 36066 . - 0 ID=cds-WP_001045520.1;Parent=gene-AB25_RS09870;Dbxref=GenBank:WP_001045520.1;Name=WP_001045520.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435097.1;locus_tag=AB25_RS09870;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=WP_001045520.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 36059 36454 . - . ID=gene-AB25_RS09865;Name=ygdD;gbkey=Gene;gene=ygdD;gene_biotype=protein_coding;locus_tag=AB25_RS09865;old_locus_tag=AB25_3215 NZ_JJMC01000055.1 Protein Homology CDS 36059 36454 . - 0 ID=cds-WP_000203905.1;Parent=gene-AB25_RS09865;Dbxref=GenBank:WP_000203905.1;Name=WP_000203905.1;gbkey=CDS;gene=ygdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311694.1;locus_tag=AB25_RS09865;product=DUF423 domain-containing protein;protein_id=WP_000203905.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 36473 37390 . - . ID=gene-AB25_RS09860;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=AB25_RS09860;old_locus_tag=AB25_3216 NZ_JJMC01000055.1 Protein Homology CDS 36473 37390 . - 0 ID=cds-WP_000044401.1;Parent=gene-AB25_RS09860;Dbxref=GenBank:WP_000044401.1;Name=WP_000044401.1;gbkey=CDS;gene=gcvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130970.1;locus_tag=AB25_RS09860;product=glycine cleavage system transcriptional regulator GcvA;protein_id=WP_000044401.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 37741 37968 . - . ID=gene-AB25_RS09855;Name=ygdI;gbkey=Gene;gene=ygdI;gene_biotype=protein_coding;locus_tag=AB25_RS09855;old_locus_tag=AB25_3217 NZ_JJMC01000055.1 Protein Homology CDS 37741 37968 . - 0 ID=cds-WP_000750398.1;Parent=gene-AB25_RS09855;Dbxref=GenBank:WP_000750398.1;Name=WP_000750398.1;gbkey=CDS;gene=ygdI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417289.2;locus_tag=AB25_RS09855;product=YgdI/YgdR family lipoprotein;protein_id=WP_000750398.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 38160 39365 . + . ID=gene-AB25_RS09850;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;locus_tag=AB25_RS09850;old_locus_tag=AB25_3218 NZ_JJMC01000055.1 Protein Homology CDS 38160 39365 . + 0 ID=cds-WP_001356254.1;Parent=gene-AB25_RS09850;Dbxref=GenBank:WP_001356254.1;Name=WP_001356254.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;gene=csdA;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417290.1;locus_tag=AB25_RS09850;product=cysteine desulfurase CsdA;protein_id=WP_001356254.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 39365 39808 . + . ID=gene-AB25_RS09845;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=AB25_RS09845;old_locus_tag=AB25_3219 NZ_JJMC01000055.1 Protein Homology CDS 39365 39808 . + 0 ID=cds-WP_000184249.1;Parent=gene-AB25_RS09845;Dbxref=GenBank:WP_000184249.1;Name=WP_000184249.1;gbkey=CDS;gene=csdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311698.1;locus_tag=AB25_RS09845;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=WP_000184249.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 39859 40665 . - . ID=gene-AB25_RS09840;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=AB25_RS09840;old_locus_tag=AB25_3220 NZ_JJMC01000055.1 Protein Homology CDS 39859 40665 . - 0 ID=cds-WP_000117734.1;Parent=gene-AB25_RS09840;Dbxref=GenBank:WP_000117734.1;Name=WP_000117734.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708606.1;locus_tag=AB25_RS09840;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WP_000117734.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 40904 42001 . - . ID=gene-AB25_RS09835;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=AB25_RS09835;old_locus_tag=AB25_3221 NZ_JJMC01000055.1 Protein Homology CDS 40904 42001 . - 0 ID=cds-WP_000678646.1;Parent=gene-AB25_RS09835;Dbxref=GenBank:WP_000678646.1;Name=WP_000678646.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;gene=mltA;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785702.1;locus_tag=AB25_RS09835;product=murein transglycosylase A;protein_id=WP_000678646.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 42210 42286 . + . ID=gene-AB25_RS09830;Name=AB25_RS09830;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS09830;old_locus_tag=AB25_3222 NZ_JJMC01000055.1 tRNAscan-SE tRNA 42210 42286 . + . ID=rna-AB25_RS09830;Parent=gene-AB25_RS09830;anticodon=(pos:42244..42246);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS09830;product=tRNA-Met NZ_JJMC01000055.1 tRNAscan-SE exon 42210 42286 . + . ID=exon-AB25_RS09830-1;Parent=rna-AB25_RS09830;anticodon=(pos:42244..42246);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS09830;product=tRNA-Met NZ_JJMC01000055.1 RefSeq gene 42320 42396 . + . ID=gene-AB25_RS09825;Name=AB25_RS09825;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS09825;old_locus_tag=AB25_3223 NZ_JJMC01000055.1 tRNAscan-SE tRNA 42320 42396 . + . ID=rna-AB25_RS09825;Parent=gene-AB25_RS09825;anticodon=(pos:42354..42356);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS09825;product=tRNA-Met NZ_JJMC01000055.1 tRNAscan-SE exon 42320 42396 . + . ID=exon-AB25_RS09825-1;Parent=rna-AB25_RS09825;anticodon=(pos:42354..42356);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS09825;product=tRNA-Met NZ_JJMC01000055.1 RefSeq gene 42430 42506 . + . ID=gene-AB25_RS09820;Name=AB25_RS09820;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS09820;old_locus_tag=AB25_3224 NZ_JJMC01000055.1 tRNAscan-SE tRNA 42430 42506 . + . ID=rna-AB25_RS09820;Parent=gene-AB25_RS09820;anticodon=(pos:42464..42466);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS09820;product=tRNA-Met NZ_JJMC01000055.1 tRNAscan-SE exon 42430 42506 . + . ID=exon-AB25_RS09820-1;Parent=rna-AB25_RS09820;anticodon=(pos:42464..42466);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS09820;product=tRNA-Met NZ_JJMC01000055.1 RefSeq gene 42581 43834 . - . ID=gene-AB25_RS09815;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=AB25_RS09815;old_locus_tag=AB25_3225 NZ_JJMC01000055.1 Protein Homology CDS 42581 43834 . - 0 ID=cds-WP_000016907.1;Parent=gene-AB25_RS09815;Dbxref=GenBank:WP_000016907.1;Name=WP_000016907.1;Note=Like AmiA%2C dependent on TAT (Twin-Arginine Translocation) system for export.;gbkey=CDS;gene=amiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311701.2;locus_tag=AB25_RS09815;product=N-acetylmuramoyl-L-alanine amidase AmiC;protein_id=WP_000016907.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 44066 45397 . + . ID=gene-AB25_RS09810;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=AB25_RS09810;old_locus_tag=AB25_3226 NZ_JJMC01000055.1 Protein Homology CDS 44066 45397 . + 0 ID=cds-WP_001392592.1;Parent=gene-AB25_RS09810;Dbxref=GenBank:WP_001392592.1;Name=WP_001392592.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311702.1;locus_tag=AB25_RS09810;product=amino-acid N-acetyltransferase;protein_id=WP_001392592.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 45459 47285 . - . ID=gene-AB25_RS09805;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=AB25_RS09805;old_locus_tag=AB25_3227 NZ_JJMC01000055.1 Protein Homology CDS 45459 47285 . - 0 ID=cds-WP_000775946.1;Parent=gene-AB25_RS09805;Dbxref=GenBank:WP_000775946.1;Name=WP_000775946.1;Ontology_term=GO:0006302,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=double-strand break repair|0006302||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417296.1;locus_tag=AB25_RS09805;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_000775946.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 47285 50827 . - . ID=gene-AB25_RS09800;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=AB25_RS09800;old_locus_tag=AB25_3228 NZ_JJMC01000055.1 Protein Homology CDS 47285 50827 . - 0 ID=cds-WP_001392583.1;Parent=gene-AB25_RS09800;Dbxref=GenBank:WP_001392583.1;Name=WP_001392583.1;Ontology_term=GO:0006281,GO:0003677,GO:0003678,GO:0005524,GO:0008854;gbkey=CDS;gene=recB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708611.2;locus_tag=AB25_RS09800;product=exodeoxyribonuclease V subunit beta;protein_id=WP_001392583.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 50820 53708 . - . ID=gene-AB25_RS09795;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=protein_coding;locus_tag=AB25_RS09795;old_locus_tag=AB25_3229 NZ_JJMC01000055.1 Protein Homology CDS 50820 53708 . - 0 ID=cds-WP_001138163.1;Parent=gene-AB25_RS09795;Dbxref=GenBank:WP_001138163.1;Name=WP_001138163.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;gene=ptrA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311705.1;locus_tag=AB25_RS09795;product=pitrilysin;protein_id=WP_001138163.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 53884 57252 . - . ID=gene-AB25_RS09790;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=AB25_RS09790;old_locus_tag=AB25_3230 NZ_JJMC01000055.1 Protein Homology CDS 53884 57252 . - 0 ID=cds-WP_000946943.1;Parent=gene-AB25_RS09790;Dbxref=GenBank:WP_000946943.1;Name=WP_000946943.1;Ontology_term=GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417299.1;locus_tag=AB25_RS09790;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_000946943.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 57265 57588 . - . ID=gene-AB25_RS09785;Name=ppdC;gbkey=Gene;gene=ppdC;gene_biotype=protein_coding;locus_tag=AB25_RS09785;old_locus_tag=AB25_3231 NZ_JJMC01000055.1 Protein Homology CDS 57265 57588 . - 0 ID=cds-WP_001276478.1;Parent=gene-AB25_RS09785;Dbxref=GenBank:WP_001276478.1;Name=WP_001276478.1;gbkey=CDS;gene=ppdC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417300.1;locus_tag=AB25_RS09785;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_001276478.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 57573 57980 . - . ID=gene-AB25_RS09780;Name=ygdB;gbkey=Gene;gene=ygdB;gene_biotype=protein_coding;locus_tag=AB25_RS09780;old_locus_tag=AB25_3232 NZ_JJMC01000055.1 Protein Homology CDS 57573 57980 . - 0 ID=cds-WP_001078388.1;Parent=gene-AB25_RS09780;Dbxref=GenBank:WP_001078388.1;Name=WP_001078388.1;gbkey=CDS;gene=ygdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417301.4;locus_tag=AB25_RS09780;product=DUF2509 family protein;protein_id=WP_001078388.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 57977 58540 . - . ID=gene-AB25_RS09775;Name=ppdB;gbkey=Gene;gene=ppdB;gene_biotype=protein_coding;locus_tag=AB25_RS09775;old_locus_tag=AB25_3233 NZ_JJMC01000055.1 Protein Homology CDS 57977 58540 . - 0 ID=cds-WP_001144322.1;Parent=gene-AB25_RS09775;Dbxref=GenBank:WP_001144322.1;Name=WP_001144322.1;gbkey=CDS;gene=ppdB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439276.1;locus_tag=AB25_RS09775;product=prepilin peptidase-dependent protein;protein_id=WP_001144322.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 58531 59001 . - . ID=gene-AB25_RS09770;Name=ppdA;gbkey=Gene;gene=ppdA;gene_biotype=protein_coding;locus_tag=AB25_RS09770;old_locus_tag=AB25_3234 NZ_JJMC01000055.1 Protein Homology CDS 58531 59001 . - 0 ID=cds-WP_000857051.1;Parent=gene-AB25_RS09770;Dbxref=GenBank:WP_000857051.1;Name=WP_000857051.1;gbkey=CDS;gene=ppdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417303.1;locus_tag=AB25_RS09770;product=prepilin peptidase-dependent protein;protein_id=WP_000857051.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 59186 59980 . - . ID=gene-AB25_RS09765;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=AB25_RS09765;old_locus_tag=AB25_3235 NZ_JJMC01000055.1 Protein Homology CDS 59186 59980 . - 0 ID=cds-WP_000816232.1;Parent=gene-AB25_RS09765;Dbxref=GenBank:WP_000816232.1;Name=WP_000816232.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1;locus_tag=AB25_RS09765;product=thymidylate synthase;protein_id=WP_000816232.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 59987 60862 . - . ID=gene-AB25_RS09760;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=AB25_RS09760;old_locus_tag=AB25_3236 NZ_JJMC01000055.1 Protein Homology CDS 59987 60862 . - 0 ID=cds-WP_000204658.1;Parent=gene-AB25_RS09760;Dbxref=GenBank:WP_000204658.1;Name=WP_000204658.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311712.1;locus_tag=AB25_RS09760;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_000204658.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 61013 63259 . - . ID=gene-AB25_RS09755;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=AB25_RS09755;old_locus_tag=AB25_3237 NZ_JJMC01000055.1 Protein Homology CDS 61013 63259 . - 0 ID=cds-WP_001581674.1;Parent=gene-AB25_RS09755;Dbxref=GenBank:WP_001581674.1;Name=WP_001581674.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311713.1;locus_tag=AB25_RS09755;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_001581674.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 63272 63802 . - . ID=gene-AB25_RS09750;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=AB25_RS09750;old_locus_tag=AB25_3238 NZ_JJMC01000055.1 Protein Homology CDS 63272 63802 . - 0 ID=cds-WP_000564489.1;Parent=gene-AB25_RS09750;Dbxref=GenBank:WP_000564489.1;Name=WP_000564489.1;Ontology_term=GO:0016787;gbkey=CDS;gene=rppH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001655775.1;locus_tag=AB25_RS09750;product=RNA pyrophosphohydrolase;protein_id=WP_000564489.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 64155 64301 . - . ID=gene-AB25_RS32720;Name=ygdT;gbkey=Gene;gene=ygdT;gene_biotype=protein_coding;locus_tag=AB25_RS32720 NZ_JJMC01000055.1 Protein Homology CDS 64155 64301 . - 0 ID=cds-WP_000953278.1;Parent=gene-AB25_RS32720;Dbxref=GenBank:WP_000953278.1;Name=WP_000953278.1;gbkey=CDS;gene=ygdT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502650.1;locus_tag=AB25_RS32720;product=protein YgdT;protein_id=WP_000953278.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 64487 65176 . + . ID=gene-AB25_RS09740;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=AB25_RS09740;old_locus_tag=AB25_3240 NZ_JJMC01000055.1 Protein Homology CDS 64487 65176 . + 0 ID=cds-WP_000082188.1;Parent=gene-AB25_RS09740;Dbxref=GenBank:WP_000082188.1;Name=WP_000082188.1;Ontology_term=GO:0006304,GO:0004519;gbkey=CDS;gene=mutH;go_function=endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311715.1;locus_tag=AB25_RS09740;product=DNA mismatch repair endonuclease MutH;protein_id=WP_000082188.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 65245 65958 . + . ID=gene-AB25_RS09735;Name=ygdQ;gbkey=Gene;gene=ygdQ;gene_biotype=protein_coding;locus_tag=AB25_RS09735;old_locus_tag=AB25_3241 NZ_JJMC01000055.1 Protein Homology CDS 65245 65958 . + 0 ID=cds-WP_000895624.1;Parent=gene-AB25_RS09735;Dbxref=GenBank:WP_000895624.1;Name=WP_000895624.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;gene=ygdQ;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311716.1;locus_tag=AB25_RS09735;product=TerC family protein;protein_id=WP_000895624.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 66096 66314 . + . ID=gene-AB25_RS09730;Name=ygdR;gbkey=Gene;gene=ygdR;gene_biotype=protein_coding;locus_tag=AB25_RS09730;old_locus_tag=AB25_3242 NZ_JJMC01000055.1 Protein Homology CDS 66096 66314 . + 0 ID=cds-WP_000758655.1;Parent=gene-AB25_RS09730;Dbxref=GenBank:WP_000758655.1;Name=WP_000758655.1;gbkey=CDS;gene=ygdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311717.1;locus_tag=AB25_RS09730;product=lipoprotein YgdR;protein_id=WP_000758655.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 66422 67462 . + . ID=gene-AB25_RS09725;Name=tas;gbkey=Gene;gene=tas;gene_biotype=protein_coding;locus_tag=AB25_RS09725;old_locus_tag=AB25_3243 NZ_JJMC01000055.1 Protein Homology CDS 66422 67462 . + 0 ID=cds-WP_001199295.1;Parent=gene-AB25_RS09725;Dbxref=GenBank:WP_001199295.1;Name=WP_001199295.1;Ontology_term=GO:0047834;gbkey=CDS;gene=tas;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417311.1;locus_tag=AB25_RS09725;product=NADP(H)-dependent aldo-keto reductase;protein_id=WP_001199295.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 67494 68687 . - . ID=gene-AB25_RS09720;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=AB25_RS09720;old_locus_tag=AB25_3244 NZ_JJMC01000055.1 Protein Homology CDS 67494 68687 . - 0 ID=cds-WP_000004616.1;Parent=gene-AB25_RS09720;Dbxref=GenBank:WP_000004616.1;Name=WP_000004616.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lplT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417312.1;locus_tag=AB25_RS09720;product=lysophospholipid transporter LplT;protein_id=WP_000004616.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 68680 70839 . - . ID=gene-AB25_RS09715;Name=aas;gbkey=Gene;gene=aas;gene_biotype=protein_coding;locus_tag=AB25_RS09715;old_locus_tag=AB25_3245 NZ_JJMC01000055.1 Protein Homology CDS 68680 70839 . - 0 ID=cds-WP_000899054.1;Parent=gene-AB25_RS09715;Dbxref=GenBank:WP_000899054.1;Name=WP_000899054.1;Ontology_term=GO:0006631,GO:0008654,GO:0008779,GO:0008922;gbkey=CDS;gene=aas;go_function=acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase activity|0008779||IEA,long-chain fatty acid [acyl-carrier-protein] ligase activity|0008922||IEA;go_process=fatty acid metabolic process|0006631||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417313.1;locus_tag=AB25_RS09715;product=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;protein_id=WP_000899054.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 71425 72456 . + . ID=gene-AB25_RS09710;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=AB25_RS09710;old_locus_tag=AB25_3247 NZ_JJMC01000055.1 Protein Homology CDS 71425 72456 . + 0 ID=cds-WP_000201048.1;Parent=gene-AB25_RS09710;Dbxref=GenBank:WP_000201048.1;Name=WP_000201048.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417314.1;locus_tag=AB25_RS09710;product=HTH-type transcriptional regulator GalR;protein_id=WP_000201048.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 72463 73725 . - . ID=gene-AB25_RS09705;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=AB25_RS09705;old_locus_tag=AB25_3248 NZ_JJMC01000055.1 Protein Homology CDS 72463 73725 . - 0 ID=cds-WP_001120707.1;Parent=gene-AB25_RS09705;Dbxref=GenBank:WP_001120707.1;Name=WP_001120707.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417315.1;locus_tag=AB25_RS09705;product=diaminopimelate decarboxylase;protein_id=WP_001120707.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 73847 74782 . + . ID=gene-AB25_RS09700;Name=lysR;gbkey=Gene;gene=lysR;gene_biotype=protein_coding;locus_tag=AB25_RS09700;old_locus_tag=AB25_3249 NZ_JJMC01000055.1 Protein Homology CDS 73847 74782 . + 0 ID=cds-WP_000741827.1;Parent=gene-AB25_RS09700;Dbxref=GenBank:WP_000741827.1;Name=WP_000741827.1;gbkey=CDS;gene=lysR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311723.1;locus_tag=AB25_RS09700;product=DNA-binding transcriptional regulator LysR;protein_id=WP_000741827.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 74769 75461 . - . ID=gene-AB25_RS09695;Name=ygeA;gbkey=Gene;gene=ygeA;gene_biotype=protein_coding;locus_tag=AB25_RS09695;old_locus_tag=AB25_3250 NZ_JJMC01000055.1 Protein Homology CDS 74769 75461 . - 0 ID=cds-WP_000848664.1;Parent=gene-AB25_RS09695;Dbxref=GenBank:WP_000848664.1;Name=WP_000848664.1;gbkey=CDS;gene=ygeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311724.1;locus_tag=AB25_RS09695;product=amino acid racemase;protein_id=WP_000848664.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 75590 77008 . - . ID=gene-AB25_RS09690;Name=araE;gbkey=Gene;gene=araE;gene_biotype=protein_coding;locus_tag=AB25_RS09690;old_locus_tag=AB25_3251 NZ_JJMC01000055.1 Protein Homology CDS 75590 77008 . - 0 ID=cds-WP_000256438.1;Parent=gene-AB25_RS09690;Dbxref=GenBank:WP_000256438.1;Name=WP_000256438.1;gbkey=CDS;gene=araE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311725.1;locus_tag=AB25_RS09690;product=arabinose-proton symporter AraE;protein_id=WP_000256438.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 77323 78084 . - . ID=gene-AB25_RS09685;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=AB25_RS09685;old_locus_tag=AB25_3253 NZ_JJMC01000055.1 Protein Homology CDS 77323 78084 . - 0 ID=cds-WP_032171186.1;Parent=gene-AB25_RS09685;Dbxref=GenBank:WP_032171186.1;Name=WP_032171186.1;Ontology_term=GO:0000272,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311726.1;locus_tag=AB25_RS09685;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=WP_032171186.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 78114 78950 . - . ID=gene-AB25_RS09680;Name=kduI;gbkey=Gene;gene=kduI;gene_biotype=protein_coding;locus_tag=AB25_RS09680;old_locus_tag=AB25_3254 NZ_JJMC01000055.1 Protein Homology CDS 78114 78950 . - 0 ID=cds-WP_000383224.1;Parent=gene-AB25_RS09680;Dbxref=GenBank:WP_000383224.1;Name=WP_000383224.1;Ontology_term=GO:0045490,GO:0008697;gbkey=CDS;gene=kduI;go_function=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity|0008697||IEA;go_process=pectin catabolic process|0045490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417320.1;locus_tag=AB25_RS09680;product=5-dehydro-4-deoxy-D-glucuronate isomerase;protein_id=WP_000383224.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 79237 80418 . - . ID=gene-AB25_RS09675;Name=yqeF;gbkey=Gene;gene=yqeF;gene_biotype=protein_coding;locus_tag=AB25_RS09675;old_locus_tag=AB25_3255 NZ_JJMC01000055.1 Protein Homology CDS 79237 80418 . - 0 ID=cds-WP_000656029.1;Parent=gene-AB25_RS09675;Dbxref=GenBank:WP_000656029.1;Name=WP_000656029.1;Ontology_term=GO:0003985;gbkey=CDS;gene=yqeF;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417321.2;locus_tag=AB25_RS09675;product=acetyl-CoA C-acetyltransferase;protein_id=WP_000656029.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 80673 81902 . + . ID=gene-AB25_RS09670;Name=yqeG;gbkey=Gene;gene=yqeG;gene_biotype=protein_coding;locus_tag=AB25_RS09670;old_locus_tag=AB25_3256 NZ_JJMC01000055.1 Protein Homology CDS 80673 81902 . + 0 ID=cds-WP_000065950.1;Parent=gene-AB25_RS09670;Dbxref=GenBank:WP_000065950.1;Name=WP_000065950.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;gene=yqeG;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311729.1;locus_tag=AB25_RS09670;product=amino acid permease;protein_id=WP_000065950.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 82365 82997 . + . ID=gene-AB25_RS09665;Name=yqeH;gbkey=Gene;gene=yqeH;gene_biotype=protein_coding;locus_tag=AB25_RS09665;old_locus_tag=AB25_3257 NZ_JJMC01000055.1 Protein Homology CDS 82365 82997 . + 0 ID=cds-WP_001387025.1;Parent=gene-AB25_RS09665;Dbxref=GenBank:WP_001387025.1;Name=WP_001387025.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=yqeH;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417323.2;locus_tag=AB25_RS09665;product=helix-turn-helix transcriptional regulator;protein_id=WP_001387025.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 83331 84140 . + . ID=gene-AB25_RS09660;Name=yqeI;gbkey=Gene;gene=yqeI;gene_biotype=protein_coding;locus_tag=AB25_RS09660;old_locus_tag=AB25_3258 NZ_JJMC01000055.1 Protein Homology CDS 83331 84140 . + 0 ID=cds-WP_001345937.1;Parent=gene-AB25_RS09660;Dbxref=GenBank:WP_001345937.1;Name=WP_001345937.1;Ontology_term=GO:0003677;gbkey=CDS;gene=yqeI;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417324.1;locus_tag=AB25_RS09660;product=winged helix-turn-helix domain-containing protein;protein_id=WP_001345937.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 84133 84615 . + . ID=gene-AB25_RS09655;Name=yqeJ;gbkey=Gene;gene=yqeJ;gene_biotype=protein_coding;locus_tag=AB25_RS09655;old_locus_tag=AB25_3259 NZ_JJMC01000055.1 Protein Homology CDS 84133 84615 . + 0 ID=cds-WP_000568339.1;Parent=gene-AB25_RS09655;Dbxref=GenBank:WP_000568339.1;Name=WP_000568339.1;gbkey=CDS;gene=yqeJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417325.4;locus_tag=AB25_RS09655;product=protein YqeJ;protein_id=WP_000568339.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 84648 84728 . - . ID=gene-AB25_RS30505;Name=AB25_RS30505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS30505 NZ_JJMC01000055.1 Protein Homology CDS 84648 84728 . - 0 ID=cds-WP_000655821.1;Parent=gene-AB25_RS30505;Dbxref=GenBank:WP_000655821.1;Name=WP_000655821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791253.1;locus_tag=AB25_RS30505;product=hypothetical protein;protein_id=WP_000655821.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 84764 85189 . - . ID=gene-AB25_RS0125880;Name=yqeK;gbkey=Gene;gene=yqeK;gene_biotype=protein_coding;locus_tag=AB25_RS0125880 NZ_JJMC01000055.1 Protein Homology CDS 84764 85189 . - 0 ID=cds-WP_001356275.1;Parent=gene-AB25_RS0125880;Dbxref=GenBank:WP_001356275.1;Name=WP_001356275.1;gbkey=CDS;gene=yqeK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417326.2;locus_tag=AB25_RS0125880;product=protein YqeK;protein_id=WP_001356275.1;transl_table=11 NZ_JJMC01000055.1 RefSeq pseudogene 85383 85873 . + . ID=gene-AB25_RS0125885;Name=AB25_RS0125885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS0125885;pseudo=true NZ_JJMC01000055.1 Protein Homology CDS 85383 85873 . + 0 ID=cds-AB25_RS0125885;Parent=gene-AB25_RS0125885;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311734.1;locus_tag=AB25_RS0125885;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJMC01000055.1 RefSeq pseudogene 86098 86589 . + . ID=gene-AB25_RS0125890;Name=ygeG;gbkey=Gene;gene=ygeG;gene_biotype=pseudogene;locus_tag=AB25_RS0125890;pseudo=true NZ_JJMC01000055.1 Protein Homology CDS 86098 86589 . + 0 ID=cds-AB25_RS0125890;Parent=gene-AB25_RS0125890;Note=internal stop;gbkey=CDS;gene=ygeG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417328.1;locus_tag=AB25_RS0125890;product=tetratricopeptide repeat protein;pseudo=true;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 86924 88300 . + . ID=gene-AB25_RS09650;Name=ygeH;gbkey=Gene;gene=ygeH;gene_biotype=protein_coding;locus_tag=AB25_RS09650;old_locus_tag=AB25_3263 NZ_JJMC01000055.1 Protein Homology CDS 86924 88300 . + 0 ID=cds-WP_000362702.1;Parent=gene-AB25_RS09650;Dbxref=GenBank:WP_000362702.1;Name=WP_000362702.1;gbkey=CDS;gene=ygeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417329.1;locus_tag=AB25_RS09650;product=HilA family transcriptional regulator YgeH;protein_id=WP_000362702.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 88468 88686 . + . ID=gene-AB25_RS09645;Name=ygeI;gbkey=Gene;gene=ygeI;gene_biotype=protein_coding;locus_tag=AB25_RS09645;old_locus_tag=AB25_3264 NZ_JJMC01000055.1 Protein Homology CDS 88468 88686 . + 0 ID=cds-WP_000184091.1;Parent=gene-AB25_RS09645;Dbxref=GenBank:WP_000184091.1;Name=WP_000184091.1;gbkey=CDS;gene=ygeI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417330.1;locus_tag=AB25_RS09645;product=protein YgeI;protein_id=WP_000184091.1;transl_table=11 NZ_JJMC01000055.1 RefSeq pseudogene 88769 89271 . + . ID=gene-AB25_RS0125895;Name=AB25_RS0125895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS0125895;pseudo=true NZ_JJMC01000055.1 Protein Homology CDS 88769 89271 . + 0 ID=cds-AB25_RS0125895;Parent=gene-AB25_RS0125895;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019843029.1;locus_tag=AB25_RS0125895;product=lytic transglycosylase domain-containing protein;pseudo=true;transl_table=11 NZ_JJMC01000055.1 RefSeq pseudogene 89290 89922 . - . ID=gene-AB25_RS09640;Name=AB25_RS09640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS09640;old_locus_tag=AB25_3266;pseudo=true NZ_JJMC01000055.1 Protein Homology CDS 89290 89922 . - 0 ID=cds-AB25_RS09640;Parent=gene-AB25_RS09640;Note=internal stop;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311739.1;locus_tag=AB25_RS09640;product=LuxR C-terminal-related transcriptional regulator;pseudo=true;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 90143 90574 . - . ID=gene-AB25_RS32025;Name=AB25_RS32025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32025;old_locus_tag=AB25_3267 NZ_JJMC01000055.1 Protein Homology CDS 90143 90574 . - 0 ID=cds-WP_001299900.1;Parent=gene-AB25_RS32025;Dbxref=GenBank:WP_001299900.1;Name=WP_001299900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001701978.1;locus_tag=AB25_RS32025;product=hypothetical protein;protein_id=WP_001299900.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 90577 90762 . - . ID=gene-AB25_RS32840;Name=AB25_RS32840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32840 NZ_JJMC01000055.1 Protein Homology CDS 90577 90762 . - 0 ID=cds-WP_306306231.1;Parent=gene-AB25_RS32840;Dbxref=GenBank:WP_306306231.1;Name=WP_306306231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364974.1;locus_tag=AB25_RS32840;product=hypothetical protein;protein_id=WP_306306231.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 90791 91372 . - . ID=gene-AB25_RS28710;Name=AB25_RS28710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS28710 NZ_JJMC01000055.1 Protein Homology CDS 90791 91372 . - 0 ID=cds-WP_001341846.1;Parent=gene-AB25_RS28710;Dbxref=GenBank:WP_001341846.1;Name=WP_001341846.1;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311742.1;locus_tag=AB25_RS28710;product=type III secretion apparatus protein OrgA/MxiK;protein_id=WP_001341846.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 91388 92122 . - . ID=gene-AB25_RS09625;Name=AB25_RS09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS09625;old_locus_tag=AB25_3269 NZ_JJMC01000055.1 Protein Homology CDS 91388 92122 . - 0 ID=cds-WP_000875234.1;Parent=gene-AB25_RS09625;Dbxref=GenBank:WP_000875234.1;Name=WP_000875234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311743.1;locus_tag=AB25_RS09625;product=EscJ/YscJ/HrcJ family type III secretion inner membrane ring protein;protein_id=WP_000875234.1;transl_table=11 NZ_JJMC01000055.1 RefSeq pseudogene 92119 92393 . - . ID=gene-AB25_RS30520;Name=sctI;gbkey=Gene;gene=sctI;gene_biotype=pseudogene;locus_tag=AB25_RS30520;old_locus_tag=AB25_3270;pseudo=true NZ_JJMC01000055.1 Protein Homology CDS 92119 92393 . - 0 ID=cds-AB25_RS30520;Parent=gene-AB25_RS30520;Note=frameshifted;gbkey=CDS;gene=sctI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001322788.1;locus_tag=AB25_RS30520;product=type III secretion system inner rod subunit SctI;pseudo=true;transl_table=11 NZ_JJMC01000055.1 RefSeq pseudogene 92470 92710 . - . ID=gene-AB25_RS28715;Name=AB25_RS28715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS28715;pseudo=true NZ_JJMC01000055.1 Protein Homology CDS 92470 92710 . - 0 ID=cds-AB25_RS28715;Parent=gene-AB25_RS28715;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311745.1;locus_tag=AB25_RS28715;product=type III secretion system needle complex protein;pseudo=true;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 92724 93905 . - . ID=gene-AB25_RS09615;Name=AB25_RS09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS09615;old_locus_tag=AB25_3272 NZ_JJMC01000055.1 Protein Homology CDS 92724 93905 . - 0 ID=cds-WP_001365813.1;Parent=gene-AB25_RS09615;Dbxref=GenBank:WP_001365813.1;Name=WP_001365813.1;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001365813.1;locus_tag=AB25_RS09615;product=PrgH/EprH family type III secretion apparatus protein;protein_id=WP_001365813.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 94163 94663 . + . ID=gene-AB25_RS09610;Name=AB25_RS09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS09610;old_locus_tag=AB25_3273 NZ_JJMC01000055.1 Protein Homology CDS 94163 94663 . + 0 ID=cds-WP_001195871.1;Parent=gene-AB25_RS09610;Dbxref=GenBank:WP_001195871.1;Name=WP_001195871.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311747.1;locus_tag=AB25_RS09610;product=helix-turn-helix transcriptional regulator;protein_id=WP_001195871.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 94665 94958 . + . ID=gene-AB25_RS0125915;Name=AB25_RS0125915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0125915 NZ_JJMC01000055.1 Protein Homology CDS 94665 94958 . + 0 ID=cds-WP_000060557.1;Parent=gene-AB25_RS0125915;Dbxref=GenBank:WP_000060557.1;Name=WP_000060557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000060689.1;locus_tag=AB25_RS0125915;product=invasion protein;protein_id=WP_000060557.1;transl_table=11 NZ_JJMC01000055.1 RefSeq pseudogene 95020 96150 . - . ID=gene-AB25_RS09595;Name=AB25_RS09595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS09595;old_locus_tag=AB25_3276;pseudo=true NZ_JJMC01000055.1 Protein Homology CDS 95020 96150 . - 0 ID=cds-AB25_RS09595;Parent=gene-AB25_RS09595;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311748.1;locus_tag=AB25_RS09595;product=EscU/YscU/HrcU family type III secretion system export apparatus switch protein;pseudo=true;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 96159 96926 . - . ID=gene-AB25_RS09590;Name=sctT;gbkey=Gene;gene=sctT;gene_biotype=protein_coding;locus_tag=AB25_RS09590;old_locus_tag=AB25_3277 NZ_JJMC01000055.1 Protein Homology CDS 96159 96926 . - 0 ID=cds-WP_000390568.1;Parent=gene-AB25_RS09590;Dbxref=GenBank:WP_000390568.1;Name=WP_000390568.1;Ontology_term=GO:0030254,GO:0016020;gbkey=CDS;gene=sctT;go_component=membrane|0016020||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: protein motif:HMM:TIGR01401.1;locus_tag=AB25_RS09590;product=type III secretion system export apparatus subunit SctT;protein_id=WP_000390568.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 96928 97188 . - . ID=gene-AB25_RS09585;Name=AB25_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS09585;old_locus_tag=AB25_3278 NZ_JJMC01000055.1 Protein Homology CDS 96928 97188 . - 0 ID=cds-WP_000998122.1;Parent=gene-AB25_RS09585;Dbxref=GenBank:WP_000998122.1;Name=WP_000998122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311751.1;locus_tag=AB25_RS09585;product=EscS/YscS/HrcS family type III secretion system export apparatus protein;protein_id=WP_000998122.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 97198 97863 . - . ID=gene-AB25_RS09580;Name=AB25_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS09580;old_locus_tag=AB25_3279 NZ_JJMC01000055.1 Protein Homology CDS 97198 97863 . - 0 ID=cds-WP_000071559.1;Parent=gene-AB25_RS09580;Dbxref=GenBank:WP_000071559.1;Name=WP_000071559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311752.1;locus_tag=AB25_RS09580;product=EscR/YscR/HrcR family type III secretion system export apparatus protein;protein_id=WP_000071559.1;transl_table=11 NZ_JJMC01000055.1 RefSeq pseudogene 97853 98840 . - . ID=gene-AB25_RS09575;Name=AB25_RS09575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS09575;old_locus_tag=AB25_3280;pseudo=true NZ_JJMC01000055.1 Protein Homology CDS 97853 98840 . - 0 ID=cds-AB25_RS09575;Parent=gene-AB25_RS09575;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311753.1;locus_tag=AB25_RS09575;product=YscQ/HrcQ family type III secretion apparatus protein;pseudo=true;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 98800 99147 . - . ID=gene-AB25_RS32500;Name=AB25_RS32500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32500 NZ_JJMC01000055.1 Protein Homology CDS 98800 99147 . - 0 ID=cds-WP_000494996.1;Parent=gene-AB25_RS32500;Dbxref=GenBank:WP_000494996.1;Name=WP_000494996.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014559.6;locus_tag=AB25_RS32500;product=type III secretion system needle length determinant%2C SpaN/EivJ family;protein_id=WP_000494996.1;transl_table=11 NZ_JJMC01000055.1 RefSeq pseudogene 99444 99673 . - . ID=gene-AB25_RS32505;Name=AB25_RS32505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32505;partial=true;pseudo=true;start_range=.,99444 NZ_JJMC01000055.1 Protein Homology CDS 99444 99673 . - 0 ID=cds-AB25_RS32505;Parent=gene-AB25_RS32505;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311755.1;locus_tag=AB25_RS32505;partial=true;product=type III secretion protein;pseudo=true;start_range=.,99444;transl_table=11 NZ_JJMC01000055.1 RefSeq pseudogene 99651 100107 . - . ID=gene-AB25_RS09570;Name=AB25_RS09570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS09570;old_locus_tag=AB25_3284;pseudo=true NZ_JJMC01000055.1 Protein Homology CDS 99651 100107 . - 0 ID=cds-AB25_RS09570;Parent=gene-AB25_RS09570;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311756.2;locus_tag=AB25_RS09570;product=type III secretion protein;pseudo=true;transl_table=11 NZ_JJMC01000055.1 RefSeq pseudogene 100097 101389 . - . ID=gene-AB25_RS0125930;Name=sctN;gbkey=Gene;gene=sctN;gene_biotype=pseudogene;locus_tag=AB25_RS0125930;pseudo=true NZ_JJMC01000055.1 Protein Homology CDS 100097 101389 . - 0 ID=cds-AB25_RS0125930;Parent=gene-AB25_RS0125930;Note=internal stop;gbkey=CDS;gene=sctN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311757.2;locus_tag=AB25_RS0125930;product=type III secretion system ATPase SctN;pseudo=true;transl_table=11 NZ_JJMC01000055.1 RefSeq pseudogene 101421 101981 . - . ID=gene-AB25_RS09565;Name=AB25_RS09565;end_range=101981,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS09565;old_locus_tag=AB25_3287;partial=true;pseudo=true NZ_JJMC01000055.1 Protein Homology CDS 101421 101981 . - 0 ID=cds-AB25_RS09565;Parent=gene-AB25_RS09565;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009306,GO:0016020;end_range=101981,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311758.1;locus_tag=AB25_RS09565;partial=true;product=FHIPEP family type III secretion protein;pseudo=true;transl_table=11 NZ_JJMC01000055.1 RefSeq pseudogene 101960 102082 . - . ID=gene-AB25_RS0125935;Name=AB25_RS0125935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS0125935;partial=true;pseudo=true;start_range=.,101960 NZ_JJMC01000055.1 Protein Homology CDS 101960 102082 . - 0 ID=cds-AB25_RS0125935;Parent=gene-AB25_RS0125935;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311761.1;locus_tag=AB25_RS0125935;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,101960;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 102428 102607 . - . ID=gene-AB25_RS09560;Name=AB25_RS09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS09560;old_locus_tag=AB25_3288 NZ_JJMC01000055.1 Protein Homology CDS 102428 102607 . - 0 ID=cds-WP_001364891.1;Parent=gene-AB25_RS09560;Dbxref=GenBank:WP_001364891.1;Name=WP_001364891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311762.1;locus_tag=AB25_RS09560;product=GhoT/OrtT family toxin;protein_id=WP_001364891.1;transl_table=11 NZ_JJMC01000055.1 RefSeq pseudogene 102674 104284 . - . ID=gene-AB25_RS0125940;Name=AB25_RS0125940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS0125940;pseudo=true NZ_JJMC01000055.1 Protein Homology CDS 102674 104284 . - 0 ID=cds-AB25_RS0125940;Parent=gene-AB25_RS0125940;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001613747.1;locus_tag=AB25_RS0125940;product=glycoside hydrolase family 15 protein;pseudo=true;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 104518 104591 . - . ID=gene-AB25_RS09555;Name=AB25_RS09555;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS09555;old_locus_tag=AB25_3292 NZ_JJMC01000055.1 tRNAscan-SE tRNA 104518 104591 . - . ID=rna-AB25_RS09555;Parent=gene-AB25_RS09555;anticodon=(pos:complement(104557..104559));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS09555;product=tRNA-Gly NZ_JJMC01000055.1 tRNAscan-SE exon 104518 104591 . - . ID=exon-AB25_RS09555-1;Parent=rna-AB25_RS09555;anticodon=(pos:complement(104557..104559));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS09555;product=tRNA-Gly NZ_JJMC01000055.1 RefSeq gene 104670 105425 . - . ID=gene-AB25_RS09550;Name=actS;gbkey=Gene;gene=actS;gene_biotype=protein_coding;locus_tag=AB25_RS09550;old_locus_tag=AB25_3293 NZ_JJMC01000055.1 Protein Homology CDS 104670 105425 . - 0 ID=cds-WP_001301085.1;Parent=gene-AB25_RS09550;Dbxref=GenBank:WP_001301085.1;Name=WP_001301085.1;gbkey=CDS;gene=actS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417341.4;locus_tag=AB25_RS09550;product=amidase activator ActS;protein_id=WP_001301085.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 105840 108137 . + . ID=gene-AB25_RS09545;Name=xdhA;gbkey=Gene;gene=xdhA;gene_biotype=protein_coding;locus_tag=AB25_RS09545;old_locus_tag=AB25_3294 NZ_JJMC01000055.1 Protein Homology CDS 105840 108137 . + 0 ID=cds-WP_000388128.1;Parent=gene-AB25_RS09545;Dbxref=GenBank:WP_000388128.1;Name=WP_000388128.1;Ontology_term=GO:0005506,GO:0016491;gbkey=CDS;gene=xdhA;go_function=iron ion binding|0005506||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708647.1;locus_tag=AB25_RS09545;product=xanthine dehydrogenase molybdenum-binding subunit XdhA;protein_id=WP_000388128.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 108148 109026 . + . ID=gene-AB25_RS09540;Name=xdhB;gbkey=Gene;gene=xdhB;gene_biotype=protein_coding;locus_tag=AB25_RS09540;old_locus_tag=AB25_3295 NZ_JJMC01000055.1 Protein Homology CDS 108148 109026 . + 0 ID=cds-WP_000459206.1;Parent=gene-AB25_RS09540;Dbxref=GenBank:WP_000459206.1;Name=WP_000459206.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;gene=xdhB;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311767.1;locus_tag=AB25_RS09540;product=xanthine dehydrogenase FAD-binding subunit XdhB;protein_id=WP_000459206.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 109023 109502 . + . ID=gene-AB25_RS09535;Name=xdhC;gbkey=Gene;gene=xdhC;gene_biotype=protein_coding;locus_tag=AB25_RS09535;old_locus_tag=AB25_3296 NZ_JJMC01000055.1 Protein Homology CDS 109023 109502 . + 0 ID=cds-WP_001016605.1;Parent=gene-AB25_RS09535;Dbxref=GenBank:WP_001016605.1;Name=WP_001016605.1;gbkey=CDS;gene=xdhC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417344.1;locus_tag=AB25_RS09535;product=xanthine dehydrogenase iron sulfur-binding subunit XdhC;protein_id=WP_001016605.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 109542 111320 . - . ID=gene-AB25_RS09530;Name=ygeV;gbkey=Gene;gene=ygeV;gene_biotype=protein_coding;locus_tag=AB25_RS09530;old_locus_tag=AB25_3297 NZ_JJMC01000055.1 Protein Homology CDS 109542 111320 . - 0 ID=cds-WP_000417809.1;Parent=gene-AB25_RS09530;Dbxref=GenBank:WP_000417809.1;Name=WP_000417809.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=ygeV;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311769.1;locus_tag=AB25_RS09530;product=sigma-54 interaction domain-containing protein;protein_id=WP_000417809.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 111799 112986 . + . ID=gene-AB25_RS09525;Name=ygeW;gbkey=Gene;gene=ygeW;gene_biotype=protein_coding;locus_tag=AB25_RS09525;old_locus_tag=AB25_3298 NZ_JJMC01000055.1 Protein Homology CDS 111799 112986 . + 0 ID=cds-WP_000859787.1;Parent=gene-AB25_RS09525;Dbxref=GenBank:WP_000859787.1;Name=WP_000859787.1;gbkey=CDS;gene=ygeW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311770.2;locus_tag=AB25_RS09525;product=knotted carbamoyltransferase YgeW;protein_id=WP_000859787.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 113044 114240 . + . ID=gene-AB25_RS09520;Name=dpaL;gbkey=Gene;gene=dpaL;gene_biotype=protein_coding;locus_tag=AB25_RS09520;old_locus_tag=AB25_3299 NZ_JJMC01000055.1 Protein Homology CDS 113044 114240 . + 0 ID=cds-WP_000110493.1;Parent=gene-AB25_RS09520;Dbxref=GenBank:WP_000110493.1;Name=WP_000110493.1;Ontology_term=GO:0008838,GO:0030170;gbkey=CDS;gene=dpaL;go_function=diaminopropionate ammonia-lyase activity|0008838||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311771.1;locus_tag=AB25_RS09520;product=diaminopropionate ammonia-lyase;protein_id=WP_000110493.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 114298 115509 . + . ID=gene-AB25_RS09515;Name=ygeY;gbkey=Gene;gene=ygeY;gene_biotype=protein_coding;locus_tag=AB25_RS09515;old_locus_tag=AB25_3300 NZ_JJMC01000055.1 Protein Homology CDS 114298 115509 . + 0 ID=cds-WP_001107125.1;Parent=gene-AB25_RS09515;Dbxref=GenBank:WP_001107125.1;Name=WP_001107125.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ygeY;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311772.1;locus_tag=AB25_RS09515;product=YgeY family selenium metabolism-linked hydrolase;protein_id=WP_001107125.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 115562 116947 . + . ID=gene-AB25_RS09510;Name=hyuA;gbkey=Gene;gene=hyuA;gene_biotype=protein_coding;locus_tag=AB25_RS09510;old_locus_tag=AB25_3301 NZ_JJMC01000055.1 Protein Homology CDS 115562 116947 . + 0 ID=cds-WP_001264447.1;Parent=gene-AB25_RS09510;Dbxref=GenBank:WP_001264447.1;Name=WP_001264447.1;gbkey=CDS;gene=hyuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311773.2;locus_tag=AB25_RS09510;product=D-phenylhydantoinase;protein_id=WP_001264447.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 116995 117927 . + . ID=gene-AB25_RS09505;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=AB25_RS09505;old_locus_tag=AB25_3302 NZ_JJMC01000055.1 Protein Homology CDS 116995 117927 . + 0 ID=cds-WP_000037992.1;Parent=gene-AB25_RS09505;Dbxref=GenBank:WP_000037992.1;Name=WP_000037992.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417350.1;locus_tag=AB25_RS09505;product=carbamate kinase;protein_id=WP_000037992.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 117968 119593 . - . ID=gene-AB25_RS09500;Name=yqeB;gbkey=Gene;gene=yqeB;gene_biotype=protein_coding;locus_tag=AB25_RS09500;old_locus_tag=AB25_3303 NZ_JJMC01000055.1 Protein Homology CDS 117968 119593 . - 0 ID=cds-WP_001020377.1;Parent=gene-AB25_RS09500;Dbxref=GenBank:WP_001020377.1;Name=WP_001020377.1;gbkey=CDS;gene=yqeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417351.1;locus_tag=AB25_RS09500;product=selenium-dependent molybdenum cofactor biosynthesis protein YqeB;protein_id=WP_001020377.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 119641 120411 . - . ID=gene-AB25_RS0125950;Name=yqeC;gbkey=Gene;gene=yqeC;gene_biotype=protein_coding;locus_tag=AB25_RS0125950 NZ_JJMC01000055.1 Protein Homology CDS 119641 120411 . - 0 ID=cds-WP_000836480.1;Parent=gene-AB25_RS0125950;Dbxref=GenBank:WP_000836480.1;Name=WP_000836480.1;gbkey=CDS;gene=yqeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311776.2;locus_tag=AB25_RS0125950;product=selenium cofactor biosynthesis protein YqeC;protein_id=WP_000836480.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 120514 121092 . + . ID=gene-AB25_RS09495;Name=mocA;gbkey=Gene;gene=mocA;gene_biotype=protein_coding;locus_tag=AB25_RS09495;old_locus_tag=AB25_3305 NZ_JJMC01000055.1 Protein Homology CDS 120514 121092 . + 0 ID=cds-WP_001272853.1;Parent=gene-AB25_RS09495;Dbxref=GenBank:WP_001272853.1;Name=WP_001272853.1;Ontology_term=GO:0032324,GO:0070567;gbkey=CDS;gene=mocA;go_function=cytidylyltransferase activity|0070567||IEA;go_process=molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311777.1;locus_tag=AB25_RS09495;product=molybdenum cofactor cytidylyltransferase;protein_id=WP_001272853.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 121414 124512 . + . ID=gene-AB25_RS09490;Name=ygfK;gbkey=Gene;gene=ygfK;gene_biotype=protein_coding;locus_tag=AB25_RS09490;old_locus_tag=AB25_3306 NZ_JJMC01000055.1 Protein Homology CDS 121414 124512 . + 0 ID=cds-WP_000502402.1;Parent=gene-AB25_RS09490;Dbxref=GenBank:WP_000502402.1;Name=WP_000502402.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=ygfK;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311778.1;locus_tag=AB25_RS09490;product=putative selenate reductase subunit YgfK;protein_id=WP_000502402.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 124515 125843 . + . ID=gene-AB25_RS09485;Name=ssnA;gbkey=Gene;gene=ssnA;gene_biotype=protein_coding;locus_tag=AB25_RS09485;old_locus_tag=AB25_3307 NZ_JJMC01000055.1 Protein Homology CDS 124515 125843 . + 0 ID=cds-WP_003773330.1;Parent=gene-AB25_RS09485;Dbxref=GenBank:WP_003773330.1;Name=WP_003773330.1;Ontology_term=GO:0016810;gbkey=CDS;gene=ssnA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311779.1;locus_tag=AB25_RS09485;product=putative aminohydrolase SsnA;protein_id=WP_003773330.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 125894 126673 . + . ID=gene-AB25_RS09480;Name=ygfM;gbkey=Gene;gene=ygfM;gene_biotype=protein_coding;locus_tag=AB25_RS09480;old_locus_tag=AB25_3308 NZ_JJMC01000055.1 Protein Homology CDS 125894 126673 . + 0 ID=cds-WP_000572469.1;Parent=gene-AB25_RS09480;Dbxref=GenBank:WP_000572469.1;Name=WP_000572469.1;gbkey=CDS;gene=ygfM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311780.1;locus_tag=AB25_RS09480;product=molybdopterin-dependent oxidoreductase FAD-binding subunit;protein_id=WP_000572469.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 126670 129540 . + . ID=gene-AB25_RS09475;Name=xdhD;gbkey=Gene;gene=xdhD;gene_biotype=protein_coding;locus_tag=AB25_RS09475;old_locus_tag=AB25_3309 NZ_JJMC01000055.1 Protein Homology CDS 126670 129540 . + 0 ID=cds-WP_000583622.1;Parent=gene-AB25_RS09475;Dbxref=GenBank:WP_000583622.1;Name=WP_000583622.1;gbkey=CDS;gene=xdhD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417357.1;locus_tag=AB25_RS09475;product=molybdopterin-dependent oxidoreductase Mo/Fe-S-binding subunit;protein_id=WP_000583622.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 129705 131105 . + . ID=gene-AB25_RS09470;Name=xanQ;gbkey=Gene;gene=xanQ;gene_biotype=protein_coding;locus_tag=AB25_RS09470;old_locus_tag=AB25_3310 NZ_JJMC01000055.1 Protein Homology CDS 129705 131105 . + 0 ID=cds-WP_001280192.1;Parent=gene-AB25_RS09470;Dbxref=GenBank:WP_001280192.1;Name=WP_001280192.1;gbkey=CDS;gene=xanQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417358.2;locus_tag=AB25_RS09470;product=xanthine/proton symporter XanQ;protein_id=WP_001280192.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 131123 132439 . + . ID=gene-AB25_RS09465;Name=guaD;gbkey=Gene;gene=guaD;gene_biotype=protein_coding;locus_tag=AB25_RS09465;old_locus_tag=AB25_3311 NZ_JJMC01000055.1 Protein Homology CDS 131123 132439 . + 0 ID=cds-WP_001299798.1;Parent=gene-AB25_RS09465;Dbxref=GenBank:WP_001299798.1;Name=WP_001299798.1;Ontology_term=GO:0006147,GO:0008270,GO:0008892;gbkey=CDS;gene=guaD;go_function=zinc ion binding|0008270||IEA,guanine deaminase activity|0008892||IEA;go_process=guanine catabolic process|0006147||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311783.2;locus_tag=AB25_RS09465;product=guanine deaminase;protein_id=WP_001299798.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 132475 133842 . + . ID=gene-AB25_RS09460;Name=ghxQ;gbkey=Gene;gene=ghxQ;gene_biotype=protein_coding;gene_synonym=ygfQ;locus_tag=AB25_RS09460;old_locus_tag=AB25_3312 NZ_JJMC01000055.1 Protein Homology CDS 132475 133842 . + 0 ID=cds-WP_000012163.1;Parent=gene-AB25_RS09460;Dbxref=GenBank:WP_000012163.1;Name=WP_000012163.1;gbkey=CDS;gene=ghxQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311784.1;locus_tag=AB25_RS09460;product=guanine/hypoxanthine transporter GhxQ;protein_id=WP_000012163.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 133878 134366 . - . ID=gene-AB25_RS09455;Name=ygfS;gbkey=Gene;gene=ygfS;gene_biotype=protein_coding;locus_tag=AB25_RS09455;old_locus_tag=AB25_3313 NZ_JJMC01000055.1 Protein Homology CDS 133878 134366 . - 0 ID=cds-WP_000838428.1;Parent=gene-AB25_RS09455;Dbxref=GenBank:WP_000838428.1;Name=WP_000838428.1;Ontology_term=GO:0009061,GO:0019645,GO:0046872,GO:0051539;gbkey=CDS;gene=ygfS;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417362.4;locus_tag=AB25_RS09455;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_000838428.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 134366 136285 . - . ID=gene-AB25_RS09450;Name=ygfT;gbkey=Gene;gene=ygfT;gene_biotype=protein_coding;locus_tag=AB25_RS09450;old_locus_tag=AB25_3314 NZ_JJMC01000055.1 Protein Homology CDS 134366 136285 . - 0 ID=cds-WP_001356277.1;Parent=gene-AB25_RS09450;Dbxref=GenBank:WP_001356277.1;Name=WP_001356277.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=ygfT;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417363.2;locus_tag=AB25_RS09450;product=formate-dependent uric acid utilization protein YgfT;protein_id=WP_001356277.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 136721 138169 . + . ID=gene-AB25_RS09445;Name=uacT;gbkey=Gene;gene=uacT;gene_biotype=protein_coding;locus_tag=AB25_RS09445;old_locus_tag=AB25_3316 NZ_JJMC01000055.1 Protein Homology CDS 136721 138169 . + 0 ID=cds-WP_001356278.1;Parent=gene-AB25_RS09445;Dbxref=GenBank:WP_001356278.1;Name=WP_001356278.1;gbkey=CDS;gene=uacT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417364.2;locus_tag=AB25_RS09445;product=urate/proton symporter UacT;protein_id=WP_001356278.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 138171 138296 . + . ID=gene-AB25_RS09440;Name=yqfG;gbkey=Gene;gene=yqfG;gene_biotype=protein_coding;locus_tag=AB25_RS09440;old_locus_tag=AB25_3317 NZ_JJMC01000055.1 Protein Homology CDS 138171 138296 . + 0 ID=cds-WP_001010156.1;Parent=gene-AB25_RS09440;Dbxref=GenBank:WP_001010156.1;Name=WP_001010156.1;gbkey=CDS;gene=yqfG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791254.1;locus_tag=AB25_RS09440;product=protein YqfG;protein_id=WP_001010156.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 138293 138364 . - . ID=gene-AB25_RS31765;Name=AB25_RS31765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31765 NZ_JJMC01000055.1 Protein Homology CDS 138293 138364 . - 0 ID=cds-WP_122633157.1;Parent=gene-AB25_RS31765;Dbxref=GenBank:WP_122633157.1;Name=WP_122633157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518812.1;locus_tag=AB25_RS31765;product=hypothetical protein;protein_id=WP_122633157.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 138419 138967 . + . ID=gene-AB25_RS09435;Name=idi;gbkey=Gene;gene=idi;gene_biotype=protein_coding;locus_tag=AB25_RS09435;old_locus_tag=AB25_3318 NZ_JJMC01000055.1 Protein Homology CDS 138419 138967 . + 0 ID=cds-WP_032171194.1;Parent=gene-AB25_RS09435;Dbxref=GenBank:WP_032171194.1;Name=WP_032171194.1;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=idi;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708654.1;locus_tag=AB25_RS09435;product=isopentenyl-diphosphate Delta-isomerase;protein_id=WP_032171194.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 139010 140527 . - . ID=gene-AB25_RS09430;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=AB25_RS09430;old_locus_tag=AB25_3319 NZ_JJMC01000055.1 Protein Homology CDS 139010 140527 . - 0 ID=cds-WP_032171196.1;Parent=gene-AB25_RS09430;Dbxref=GenBank:WP_032171196.1;Name=WP_032171196.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=AB25_RS09430;product=lysine--tRNA ligase;protein_id=WP_032171196.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 140537 141635 . - . ID=gene-AB25_RS09425;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=AB25_RS09425;old_locus_tag=AB25_3320 NZ_JJMC01000055.1 Protein Homology CDS 141561 141635 . - 0 ID=cds-WP_001701073.1;Parent=gene-AB25_RS09425;Dbxref=GenBank:WP_001701073.1;Name=WP_001701073.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=AB25_RS09425;product=peptide chain release factor 2;protein_id=WP_001701073.1;transl_table=11 NZ_JJMC01000055.1 Protein Homology CDS 140537 141559 . - 0 ID=cds-WP_001701073.1;Parent=gene-AB25_RS09425;Dbxref=GenBank:WP_001701073.1;Name=WP_001701073.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=AB25_RS09425;product=peptide chain release factor 2;protein_id=WP_001701073.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 141726 143459 . - . ID=gene-AB25_RS09420;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=AB25_RS09420;old_locus_tag=AB25_3322 NZ_JJMC01000055.1 Protein Homology CDS 141726 143459 . - 0 ID=cds-WP_032296103.1;Parent=gene-AB25_RS09420;Dbxref=GenBank:WP_032296103.1;Name=WP_032296103.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708656.1;locus_tag=AB25_RS09420;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_032296103.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 143465 144175 . - . ID=gene-AB25_RS09415;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=AB25_RS09415;old_locus_tag=AB25_3323 NZ_JJMC01000055.1 Protein Homology CDS 143465 144175 . - 0 ID=cds-WP_000715214.1;Parent=gene-AB25_RS09415;Dbxref=GenBank:WP_000715214.1;Name=WP_000715214.1;Ontology_term=GO:0042597;gbkey=CDS;gene=dsbC;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311792.1;locus_tag=AB25_RS09415;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=WP_000715214.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 144200 145096 . - . ID=gene-AB25_RS09410;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=AB25_RS09410;old_locus_tag=AB25_3324 NZ_JJMC01000055.1 Protein Homology CDS 144200 145096 . - 0 ID=cds-WP_000806638.1;Parent=gene-AB25_RS09410;Dbxref=GenBank:WP_000806638.1;Name=WP_000806638.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417370.1;locus_tag=AB25_RS09410;product=site-specific tyrosine recombinase XerD;protein_id=WP_000806638.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 145208 145729 . + . ID=gene-AB25_RS09405;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;locus_tag=AB25_RS09405;old_locus_tag=AB25_3325 NZ_JJMC01000055.1 Protein Homology CDS 145208 145729 . + 0 ID=cds-WP_001055874.1;Parent=gene-AB25_RS09405;Dbxref=GenBank:WP_001055874.1;Name=WP_001055874.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;gene=fldB;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311794.1;locus_tag=AB25_RS09405;product=flavodoxin FldB;protein_id=WP_001055874.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 145769 146176 . - . ID=gene-AB25_RS09400;Name=ygfX;gbkey=Gene;gene=ygfX;gene_biotype=protein_coding;locus_tag=AB25_RS09400;old_locus_tag=AB25_3326 NZ_JJMC01000055.1 Protein Homology CDS 145769 146176 . - 0 ID=cds-WP_000244777.1;Parent=gene-AB25_RS09400;Dbxref=GenBank:WP_000244777.1;Name=WP_000244777.1;gbkey=CDS;gene=ygfX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417372.1;locus_tag=AB25_RS09400;product=protein YgfX;protein_id=WP_000244777.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 146157 146423 . - . ID=gene-AB25_RS09395;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;locus_tag=AB25_RS09395;old_locus_tag=AB25_3327 NZ_JJMC01000055.1 Protein Homology CDS 146157 146423 . - 0 ID=cds-WP_000354046.1;Parent=gene-AB25_RS09395;Dbxref=GenBank:WP_000354046.1;Name=WP_000354046.1;gbkey=CDS;gene=sdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354044.1;locus_tag=AB25_RS09395;product=FAD assembly factor SdhE;protein_id=WP_000354046.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 146666 147646 . + . ID=gene-AB25_RS09390;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=AB25_RS09390;old_locus_tag=AB25_3329 NZ_JJMC01000055.1 Protein Homology CDS 146666 147646 . + 0 ID=cds-WP_000886062.1;Parent=gene-AB25_RS09390;Dbxref=GenBank:WP_000886062.1;Name=WP_000886062.1;Ontology_term=GO:0009451,GO:0005542;gbkey=CDS;gene=ygfZ;go_function=folic acid binding|0005542||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417374.1;locus_tag=AB25_RS09390;product=tRNA-modifying protein YgfZ;protein_id=WP_000886062.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 147723 148382 . - . ID=gene-AB25_RS09385;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=AB25_RS09385;old_locus_tag=AB25_3330 NZ_JJMC01000055.1 Protein Homology CDS 147723 148382 . - 0 ID=cds-WP_000250274.1;Parent=gene-AB25_RS09385;Dbxref=GenBank:WP_000250274.1;Name=WP_000250274.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311798.1;locus_tag=AB25_RS09385;product=PAQR family membrane homeostasis protein TrhA;protein_id=WP_000250274.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 148546 148857 . - . ID=gene-AB25_RS09380;Name=yqfB;gbkey=Gene;gene=yqfB;gene_biotype=protein_coding;locus_tag=AB25_RS09380;old_locus_tag=AB25_3331 NZ_JJMC01000055.1 Protein Homology CDS 148546 148857 . - 0 ID=cds-WP_001182954.1;Parent=gene-AB25_RS09380;Dbxref=GenBank:WP_001182954.1;Name=WP_001182954.1;gbkey=CDS;gene=yqfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311799.1;locus_tag=AB25_RS09380;product=N(4)-acetylcytidine aminohydrolase;protein_id=WP_001182954.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 148902 150335 . + . ID=gene-AB25_RS09375;Name=bglA;gbkey=Gene;gene=bglA;gene_biotype=protein_coding;locus_tag=AB25_RS09375;old_locus_tag=AB25_3332 NZ_JJMC01000055.1 Protein Homology CDS 148902 150335 . + 0 ID=cds-WP_001363803.1;Parent=gene-AB25_RS09375;Dbxref=GenBank:WP_001363803.1;Name=WP_001363803.1;gbkey=CDS;gene=bglA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708664.2;locus_tag=AB25_RS09375;product=6-phospho-beta-glucosidase BglA;protein_id=WP_001363803.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 150392 151135 . - . ID=gene-AB25_RS09370;Name=ygfF;gbkey=Gene;gene=ygfF;gene_biotype=protein_coding;locus_tag=AB25_RS09370;old_locus_tag=AB25_3333 NZ_JJMC01000055.1 Protein Homology CDS 150392 151135 . - 0 ID=cds-WP_000951948.1;Parent=gene-AB25_RS09370;Dbxref=GenBank:WP_000951948.1;Name=WP_000951948.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ygfF;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417378.1;locus_tag=AB25_RS09370;product=SDR family oxidoreductase;protein_id=WP_000951948.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 151401 154274 . - . ID=gene-AB25_RS09365;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=AB25_RS09365;old_locus_tag=AB25_3334 NZ_JJMC01000055.1 Protein Homology CDS 151401 154274 . - 0 ID=cds-WP_000195049.1;Parent=gene-AB25_RS09365;Dbxref=GenBank:WP_000195049.1;Name=WP_000195049.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311801.1;locus_tag=AB25_RS09365;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_000195049.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 154392 154781 . - . ID=gene-AB25_RS09360;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=AB25_RS09360;old_locus_tag=AB25_3335 NZ_JJMC01000055.1 Protein Homology CDS 154392 154781 . - 0 ID=cds-WP_001295377.1;Parent=gene-AB25_RS09360;Dbxref=GenBank:WP_001295377.1;Name=WP_001295377.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123344.1;locus_tag=AB25_RS09360;product=glycine cleavage system protein GcvH;protein_id=WP_001295377.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 154805 155899 . - . ID=gene-AB25_RS09355;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=AB25_RS09355;old_locus_tag=AB25_3336 NZ_JJMC01000055.1 Protein Homology CDS 154805 155899 . - 0 ID=cds-WP_000068701.1;Parent=gene-AB25_RS09355;Dbxref=GenBank:WP_000068701.1;Name=WP_000068701.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417381.1;locus_tag=AB25_RS09355;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_000068701.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 156190 156273 . + . ID=gene-AB25_RS31770;Name=AB25_RS31770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31770 NZ_JJMC01000055.1 Protein Homology CDS 156190 156273 . + 0 ID=cds-WP_122633141.1;Parent=gene-AB25_RS31770;Dbxref=GenBank:WP_122633141.1;Name=WP_122633141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518813.1;locus_tag=AB25_RS31770;product=hypothetical protein;protein_id=WP_122633141.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 156347 157549 . - . ID=gene-AB25_RS09350;Name=ubiI;gbkey=Gene;gene=ubiI;gene_biotype=protein_coding;gene_synonym=visC;locus_tag=AB25_RS09350;old_locus_tag=AB25_3338 NZ_JJMC01000055.1 Protein Homology CDS 156347 157549 . - 0 ID=cds-WP_001192197.1;Parent=gene-AB25_RS09350;Dbxref=GenBank:WP_001192197.1;Name=WP_001192197.1;Ontology_term=GO:0006744,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiI;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311804.1;locus_tag=AB25_RS09350;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=WP_001192197.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 157572 158750 . - . ID=gene-AB25_RS09345;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=AB25_RS09345;old_locus_tag=AB25_3339 NZ_JJMC01000055.1 Protein Homology CDS 157572 158750 . - 0 ID=cds-WP_000111229.1;Parent=gene-AB25_RS09345;Dbxref=GenBank:WP_000111229.1;Name=WP_000111229.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417383.1;locus_tag=AB25_RS09345;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_000111229.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 158747 160072 . - . ID=gene-AB25_RS09340;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=AB25_RS09340;old_locus_tag=AB25_3340 NZ_JJMC01000055.1 Protein Homology CDS 158747 160072 . - 0 ID=cds-WP_001290129.1;Parent=gene-AB25_RS09340;Dbxref=GenBank:WP_001290129.1;Name=WP_001290129.1;Ontology_term=GO:0070006;gbkey=CDS;gene=pepP;go_function=metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708671.1;locus_tag=AB25_RS09340;product=Xaa-Pro aminopeptidase;protein_id=WP_001290129.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 160098 160676 . - . ID=gene-AB25_RS09335;Name=ygfB;gbkey=Gene;gene=ygfB;gene_biotype=protein_coding;locus_tag=AB25_RS09335;old_locus_tag=AB25_3341 NZ_JJMC01000055.1 Protein Homology CDS 160098 160676 . - 0 ID=cds-WP_001295378.1;Parent=gene-AB25_RS09335;Dbxref=GenBank:WP_001295378.1;Name=WP_001295378.1;gbkey=CDS;gene=ygfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708672.2;locus_tag=AB25_RS09335;product=UPF0149 family protein YgfB;protein_id=WP_001295378.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 160844 161173 . + . ID=gene-AB25_RS09330;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=AB25_RS09330;old_locus_tag=AB25_3342 NZ_JJMC01000055.1 Protein Homology CDS 160844 161173 . + 0 ID=cds-WP_001276008.1;Parent=gene-AB25_RS09330;Dbxref=GenBank:WP_001276008.1;Name=WP_001276008.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311808.1;locus_tag=AB25_RS09330;product=cell division protein ZapA;protein_id=WP_001276008.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 161215 161398 . + . ID=gene-AB25_RS27380;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=AB25_RS27380 NZ_JJMC01000055.1 cmsearch ncRNA 161215 161398 . + . ID=rna-AB25_RS27380;Parent=gene-AB25_RS27380;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS27380;product=6S RNA NZ_JJMC01000055.1 cmsearch exon 161215 161398 . + . ID=exon-AB25_RS27380-1;Parent=rna-AB25_RS27380;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS27380;product=6S RNA NZ_JJMC01000055.1 RefSeq gene 161419 162021 . + . ID=gene-AB25_RS09325;Name=fau;gbkey=Gene;gene=fau;gene_biotype=protein_coding;locus_tag=AB25_RS09325;old_locus_tag=AB25_3343 NZ_JJMC01000055.1 Protein Homology CDS 161419 162021 . + 0 ID=cds-WP_000192748.1;Parent=gene-AB25_RS09325;Dbxref=GenBank:WP_000192748.1;Name=WP_000192748.1;gbkey=CDS;gene=fau;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311809.4;locus_tag=AB25_RS09325;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_000192748.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 162122 162181 . - . ID=gene-AB25_RS31285;Name=AB25_RS31285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31285 NZ_JJMC01000055.1 Protein Homology CDS 162122 162181 . - 0 ID=cds-WP_001387035.1;Parent=gene-AB25_RS31285;Dbxref=GenBank:WP_001387035.1;Name=WP_001387035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791255.1;locus_tag=AB25_RS31285;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_001387035.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 162514 162573 . - . ID=gene-AB25_RS28735;Name=ibsC;gbkey=Gene;gene=ibsC;gene_biotype=protein_coding;locus_tag=AB25_RS28735 NZ_JJMC01000055.1 Protein Homology CDS 162514 162573 . - 0 ID=cds-WP_071524576.1;Parent=gene-AB25_RS28735;Dbxref=GenBank:WP_071524576.1;Name=WP_071524576.1;gbkey=CDS;gene=ibsC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791255.1;locus_tag=AB25_RS28735;product=type I toxin-antitoxin system toxin IbsC;protein_id=WP_071524576.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 162802 164034 . - . ID=gene-AB25_RS09320;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=AB25_RS09320;old_locus_tag=AB25_3345 NZ_JJMC01000055.1 Protein Homology CDS 162802 164034 . - 0 ID=cds-WP_001151604.1;Parent=gene-AB25_RS09320;Dbxref=GenBank:WP_001151604.1;Name=WP_001151604.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311811.1;locus_tag=AB25_RS09320;product=phosphoglycerate dehydrogenase;protein_id=WP_001151604.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 164290 164949 . - . ID=gene-AB25_RS09315;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=AB25_RS09315;old_locus_tag=AB25_3346 NZ_JJMC01000055.1 Protein Homology CDS 164290 164949 . - 0 ID=cds-WP_000189743.1;Parent=gene-AB25_RS09315;Dbxref=GenBank:WP_000189743.1;Name=WP_000189743.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311812.1;locus_tag=AB25_RS09315;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_000189743.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 165005 165235 . - . ID=gene-AB25_RS09310;Name=AB25_RS09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS09310;old_locus_tag=AB25_3347 NZ_JJMC01000055.1 Protein Homology CDS 165005 165235 . - 0 ID=cds-WP_001328908.1;Parent=gene-AB25_RS09310;Dbxref=GenBank:WP_001328908.1;Name=WP_001328908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001328908.1;locus_tag=AB25_RS09310;product=hypothetical protein;protein_id=WP_001328908.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 165377 166270 . + . ID=gene-AB25_RS09305;Name=argP;gbkey=Gene;gene=argP;gene_biotype=protein_coding;locus_tag=AB25_RS09305;old_locus_tag=AB25_3348 NZ_JJMC01000055.1 Protein Homology CDS 165377 166270 . + 0 ID=cds-WP_000828351.1;Parent=gene-AB25_RS09305;Dbxref=GenBank:WP_000828351.1;Name=WP_000828351.1;gbkey=CDS;gene=argP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311813.1;locus_tag=AB25_RS09305;product=DNA-binding transcriptional regulator ArgP;protein_id=WP_000828351.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 166474 168618 . + . ID=gene-AB25_RS09300;Name=scpA;gbkey=Gene;gene=scpA;gene_biotype=protein_coding;locus_tag=AB25_RS09300;old_locus_tag=AB25_3349 NZ_JJMC01000055.1 Protein Homology CDS 166474 168618 . + 0 ID=cds-WP_003957511.1;Parent=gene-AB25_RS09300;Dbxref=GenBank:WP_003957511.1;Name=WP_003957511.1;Ontology_term=GO:0004494,GO:0031419,GO:0046872;gbkey=CDS;gene=scpA;go_function=methylmalonyl-CoA mutase activity|0004494||IEA,cobalamin binding|0031419||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311814.1;locus_tag=AB25_RS09300;product=methylmalonyl-CoA mutase;protein_id=WP_003957511.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 168611 169606 . + . ID=gene-AB25_RS09295;Name=meaB;gbkey=Gene;gene=meaB;gene_biotype=protein_coding;locus_tag=AB25_RS09295;old_locus_tag=AB25_3350 NZ_JJMC01000055.1 Protein Homology CDS 168611 169606 . + 0 ID=cds-WP_000606533.1;Parent=gene-AB25_RS09295;Dbxref=GenBank:WP_000606533.1;Name=WP_000606533.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=meaB;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417393.1;locus_tag=AB25_RS09295;product=methylmalonyl Co-A mutase-associated GTPase MeaB;protein_id=WP_000606533.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 169617 170402 . + . ID=gene-AB25_RS09290;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=AB25_RS09290;old_locus_tag=AB25_3351 NZ_JJMC01000055.1 Protein Homology CDS 169617 170402 . + 0 ID=cds-WP_000122080.1;Parent=gene-AB25_RS09290;Dbxref=GenBank:WP_000122080.1;Name=WP_000122080.1;gbkey=CDS;gene=scpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311816.2;locus_tag=AB25_RS09290;product=methylmalonyl-CoA decarboxylase;protein_id=WP_000122080.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 170426 171904 . + . ID=gene-AB25_RS09285;Name=scpC;gbkey=Gene;gene=scpC;gene_biotype=protein_coding;locus_tag=AB25_RS09285;old_locus_tag=AB25_3352 NZ_JJMC01000055.1 Protein Homology CDS 170426 171904 . + 0 ID=cds-WP_000449958.1;Parent=gene-AB25_RS09285;Dbxref=GenBank:WP_000449958.1;Name=WP_000449958.1;gbkey=CDS;gene=scpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417395.1;locus_tag=AB25_RS09285;product=propionyl-CoA:succinate CoA transferase;protein_id=WP_000449958.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 171901 172797 . - . ID=gene-AB25_RS09280;Name=srsR;gbkey=Gene;gene=srsR;gene_biotype=protein_coding;gene_synonym=ygfI;locus_tag=AB25_RS09280;old_locus_tag=AB25_3353 NZ_JJMC01000055.1 Protein Homology CDS 171901 172797 . - 0 ID=cds-WP_000350811.1;Parent=gene-AB25_RS09280;Dbxref=GenBank:WP_000350811.1;Name=WP_000350811.1;Ontology_term=GO:0003700;gbkey=CDS;gene=srsR;go_function=DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417396.4;locus_tag=AB25_RS09280;product=LysR family transcriptional regulator SrsR;protein_id=WP_000350811.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 172964 173704 . - . ID=gene-AB25_RS09275;Name=yggE;gbkey=Gene;gene=yggE;gene_biotype=protein_coding;locus_tag=AB25_RS09275;old_locus_tag=AB25_3354 NZ_JJMC01000055.1 Protein Homology CDS 172964 173704 . - 0 ID=cds-WP_000669834.1;Parent=gene-AB25_RS09275;Dbxref=GenBank:WP_000669834.1;Name=WP_000669834.1;gbkey=CDS;gene=yggE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311820.1;locus_tag=AB25_RS09275;product=oxidative stress defense protein;protein_id=WP_000669834.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 173797 174432 . - . ID=gene-AB25_RS09270;Name=argO;gbkey=Gene;gene=argO;gene_biotype=protein_coding;locus_tag=AB25_RS09270;old_locus_tag=AB25_3355 NZ_JJMC01000055.1 Protein Homology CDS 173797 174432 . - 0 ID=cds-WP_000493360.1;Parent=gene-AB25_RS09270;Dbxref=GenBank:WP_000493360.1;Name=WP_000493360.1;Ontology_term=GO:1903826,GO:0061459,GO:0016020;gbkey=CDS;gene=argO;go_component=membrane|0016020||IEA;go_function=L-arginine transmembrane transporter activity|0061459||IEA;go_process=L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311821.1;locus_tag=AB25_RS09270;product=arginine exporter ArgO;protein_id=WP_000493360.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 174571 175431 . - . ID=gene-AB25_RS09265;Name=mscS;gbkey=Gene;gene=mscS;gene_biotype=protein_coding;locus_tag=AB25_RS09265;old_locus_tag=AB25_3356 NZ_JJMC01000055.1 Protein Homology CDS 174571 175431 . - 0 ID=cds-WP_000389818.1;Parent=gene-AB25_RS09265;Dbxref=GenBank:WP_000389818.1;Name=WP_000389818.1;gbkey=CDS;gene=mscS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311822.1;locus_tag=AB25_RS09265;product=small-conductance mechanosensitive channel MscS;protein_id=WP_000389818.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 175789 176868 . - . ID=gene-AB25_RS09260;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=AB25_RS09260;old_locus_tag=AB25_3357 NZ_JJMC01000055.1 Protein Homology CDS 175789 176868 . - 0 ID=cds-WP_000034372.1;Parent=gene-AB25_RS09260;Dbxref=GenBank:WP_000034372.1;Name=WP_000034372.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505616.1;locus_tag=AB25_RS09260;product=class II fructose-bisphosphate aldolase;protein_id=WP_000034372.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 177083 178246 . - . ID=gene-AB25_RS09255;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=AB25_RS09255;old_locus_tag=AB25_3358 NZ_JJMC01000055.1 Protein Homology CDS 177083 178246 . - 0 ID=cds-WP_000111269.1;Parent=gene-AB25_RS09255;Dbxref=GenBank:WP_000111269.1;Name=WP_000111269.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005761248.1;locus_tag=AB25_RS09255;product=phosphoglycerate kinase;protein_id=WP_000111269.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 178296 179315 . - . ID=gene-AB25_RS09250;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;locus_tag=AB25_RS09250;old_locus_tag=AB25_3359 NZ_JJMC01000055.1 Protein Homology CDS 178296 179315 . - 0 ID=cds-WP_000218480.1;Parent=gene-AB25_RS09250;Dbxref=GenBank:WP_000218480.1;Name=WP_000218480.1;Ontology_term=GO:0042823,GO:0048001,GO:0051287;gbkey=CDS;gene=epd;go_function=erythrose-4-phosphate dehydrogenase activity|0048001||IEA,NAD binding|0051287||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311825.1;locus_tag=AB25_RS09250;product=erythrose-4-phosphate dehydrogenase;protein_id=WP_000218480.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 179687 180118 . + . ID=gene-AB25_RS09245;Name=AB25_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS09245;old_locus_tag=AB25_3360 NZ_JJMC01000055.1 Protein Homology CDS 179687 180118 . + 0 ID=cds-WP_000988702.1;Parent=gene-AB25_RS09245;Dbxref=GenBank:WP_000988702.1;Name=WP_000988702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311826.1;locus_tag=AB25_RS09245;product=PPC domain-containing DNA-binding protein;protein_id=WP_000988702.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 180141 180719 . + . ID=gene-AB25_RS09240;Name=AB25_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS09240;old_locus_tag=AB25_3361 NZ_JJMC01000055.1 Protein Homology CDS 180141 180719 . + 0 ID=cds-WP_000124312.1;Parent=gene-AB25_RS09240;Dbxref=GenBank:WP_000124312.1;Name=WP_000124312.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311827.1;locus_tag=AB25_RS09240;product=ECF transporter S component;protein_id=WP_000124312.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 180720 181427 . + . ID=gene-AB25_RS09235;Name=AB25_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS09235;old_locus_tag=AB25_3362 NZ_JJMC01000055.1 Protein Homology CDS 180720 181427 . + 0 ID=cds-WP_000553224.1;Parent=gene-AB25_RS09235;Dbxref=GenBank:WP_000553224.1;Name=WP_000553224.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311828.1;locus_tag=AB25_RS09235;product=energy-coupling factor transporter transmembrane component T;protein_id=WP_000553224.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 181415 182092 . + . ID=gene-AB25_RS09230;Name=AB25_RS09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS09230;old_locus_tag=AB25_3363 NZ_JJMC01000055.1 Protein Homology CDS 181415 182092 . + 0 ID=cds-WP_000256969.1;Parent=gene-AB25_RS09230;Dbxref=GenBank:WP_000256969.1;Name=WP_000256969.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311829.1;locus_tag=AB25_RS09230;product=ABC transporter ATP-binding protein;protein_id=WP_000256969.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 182086 182763 . + . ID=gene-AB25_RS09225;Name=AB25_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS09225;old_locus_tag=AB25_3364 NZ_JJMC01000055.1 Protein Homology CDS 182086 182763 . + 0 ID=cds-WP_000956871.1;Parent=gene-AB25_RS09225;Dbxref=GenBank:WP_000956871.1;Name=WP_000956871.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708691.2;locus_tag=AB25_RS09225;product=ABC transporter ATP-binding protein;protein_id=WP_000956871.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 182735 183448 . - . ID=gene-AB25_RS09220;Name=AB25_RS09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS09220;old_locus_tag=AB25_3365 NZ_JJMC01000055.1 Protein Homology CDS 182735 183448 . - 0 ID=cds-WP_000687768.1;Parent=gene-AB25_RS09220;Dbxref=GenBank:WP_000687768.1;Name=WP_000687768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708692.1;locus_tag=AB25_RS09220;product=nucleoside/nucleotide kinase family protein;protein_id=WP_000687768.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 183445 183954 . - . ID=gene-AB25_RS09215;Name=fumE;gbkey=Gene;gene=fumE;gene_biotype=protein_coding;locus_tag=AB25_RS09215;old_locus_tag=AB25_3366 NZ_JJMC01000055.1 Protein Homology CDS 183445 183954 . - 0 ID=cds-WP_000224138.1;Parent=gene-AB25_RS09215;Dbxref=GenBank:WP_000224138.1;Name=WP_000224138.1;gbkey=CDS;gene=fumE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708693.1;locus_tag=AB25_RS09215;product=fumarase E;protein_id=WP_000224138.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 183976 184941 . - . ID=gene-AB25_RS09210;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=AB25_RS09210;old_locus_tag=AB25_3367 NZ_JJMC01000055.1 Protein Homology CDS 183976 184941 . - 0 ID=cds-WP_000987277.1;Parent=gene-AB25_RS09210;Dbxref=GenBank:WP_000987277.1;Name=WP_000987277.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417405.1;locus_tag=AB25_RS09210;product=class II fructose-bisphosphatase;protein_id=WP_000987277.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 184938 186215 . - . ID=gene-AB25_RS09205;Name=yggP;gbkey=Gene;gene=yggP;gene_biotype=protein_coding;locus_tag=AB25_RS09205;old_locus_tag=AB25_3368 NZ_JJMC01000055.1 Protein Homology CDS 184938 186215 . - 0 ID=cds-WP_000853221.1;Parent=gene-AB25_RS09205;Dbxref=GenBank:WP_000853221.1;Name=WP_000853221.1;gbkey=CDS;gene=yggP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311834.1;locus_tag=AB25_RS09205;product=zinc-binding dehydrogenase;protein_id=WP_000853221.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 186230 187618 . - . ID=gene-AB25_RS09200;Name=cmtA;gbkey=Gene;gene=cmtA;gene_biotype=protein_coding;locus_tag=AB25_RS09200;old_locus_tag=AB25_3369 NZ_JJMC01000055.1 Protein Homology CDS 186230 187618 . - 0 ID=cds-WP_000428805.1;Parent=gene-AB25_RS09200;Dbxref=GenBank:WP_000428805.1;Name=WP_000428805.1;gbkey=CDS;gene=cmtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311835.1;locus_tag=AB25_RS09200;product=PTS mannitol transporter subunit IICB;protein_id=WP_000428805.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 187646 188089 . - . ID=gene-AB25_RS09195;Name=cmtB;gbkey=Gene;gene=cmtB;gene_biotype=protein_coding;locus_tag=AB25_RS09195;old_locus_tag=AB25_3370 NZ_JJMC01000055.1 Protein Homology CDS 187646 188089 . - 0 ID=cds-WP_001239662.1;Parent=gene-AB25_RS09195;Dbxref=GenBank:WP_001239662.1;Name=WP_001239662.1;gbkey=CDS;gene=cmtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311836.1;locus_tag=AB25_RS09195;product=PTS mannitol transporter subunit IIA;protein_id=WP_001239662.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 188403 190394 . - . ID=gene-AB25_RS09190;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=AB25_RS09190;old_locus_tag=AB25_3372 NZ_JJMC01000055.1 Protein Homology CDS 188403 190394 . - 0 ID=cds-WP_000098614.1;Parent=gene-AB25_RS09190;Dbxref=GenBank:WP_000098614.1;Name=WP_000098614.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026188.1;locus_tag=AB25_RS09190;product=transketolase;protein_id=WP_000098614.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 190672 191430 . + . ID=gene-AB25_RS09185;Name=loiP;gbkey=Gene;gene=loiP;gene_biotype=protein_coding;gene_synonym=yggG;locus_tag=AB25_RS09185;old_locus_tag=AB25_3373 NZ_JJMC01000055.1 Protein Homology CDS 190672 191430 . + 0 ID=cds-WP_001299420.1;Parent=gene-AB25_RS09185;Dbxref=GenBank:WP_001299420.1;Name=WP_001299420.1;gbkey=CDS;gene=loiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311838.2;locus_tag=AB25_RS09185;product=metalloprotease LoiP;protein_id=WP_001299420.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 191636 192556 . - . ID=gene-AB25_RS09180;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=AB25_RS09180;old_locus_tag=AB25_3374 NZ_JJMC01000055.1 Protein Homology CDS 191636 192556 . - 0 ID=cds-WP_000105566.1;Parent=gene-AB25_RS09180;Dbxref=GenBank:WP_000105566.1;Name=WP_000105566.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311839.1;locus_tag=AB25_RS09180;product=agmatinase;protein_id=WP_000105566.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 192692 193423 . - . ID=gene-AB25_RS09175;Name=AB25_RS09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS09175;old_locus_tag=AB25_3375 NZ_JJMC01000055.1 Protein Homology CDS 192692 193423 . - 0 ID=cds-WP_000758917.1;Parent=gene-AB25_RS09175;Dbxref=GenBank:WP_000758917.1;Name=WP_000758917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311840.1;locus_tag=AB25_RS09175;product=hypothetical protein;protein_id=WP_000758917.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 193569 195545 . - . ID=gene-AB25_RS09170;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=AB25_RS09170;old_locus_tag=AB25_3376 NZ_JJMC01000055.1 Protein Homology CDS 193569 195545 . - 0 ID=cds-WP_001295380.1;Parent=gene-AB25_RS09170;Dbxref=GenBank:WP_001295380.1;Name=WP_001295380.1;Ontology_term=GO:0006527,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311841.1;locus_tag=AB25_RS09170;product=biosynthetic arginine decarboxylase;protein_id=WP_001295380.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 195554 195685 . - . ID=gene-AB25_RS09165;Name=yqgB;gbkey=Gene;gene=yqgB;gene_biotype=protein_coding;locus_tag=AB25_RS09165;old_locus_tag=AB25_3377 NZ_JJMC01000055.1 Protein Homology CDS 195554 195685 . - 0 ID=cds-WP_001297406.1;Parent=gene-AB25_RS09165;Dbxref=GenBank:WP_001297406.1;Name=WP_001297406.1;gbkey=CDS;gene=yqgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417414.2;locus_tag=AB25_RS09165;product=acid stress response protein YqgB;protein_id=WP_001297406.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 195779 195922 . - . ID=gene-AB25_RS32730;Name=yqgG;gbkey=Gene;gene=yqgG;gene_biotype=protein_coding;locus_tag=AB25_RS32730 NZ_JJMC01000055.1 Protein Homology CDS 195779 195922 . - 0 ID=cds-WP_001297404.1;Parent=gene-AB25_RS32730;Dbxref=GenBank:WP_001297404.1;Name=WP_001297404.1;gbkey=CDS;gene=yqgG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051195.1;locus_tag=AB25_RS32730;product=protein YqgG;protein_id=WP_001297404.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 196033 196284 . - . ID=gene-AB25_RS32735;Name=yqgD;gbkey=Gene;gene=yqgD;gene_biotype=protein_coding;locus_tag=AB25_RS32735 NZ_JJMC01000055.1 Protein Homology CDS 196033 196284 . - 0 ID=cds-WP_001303651.1;Parent=gene-AB25_RS32735;Dbxref=GenBank:WP_001303651.1;Name=WP_001303651.1;gbkey=CDS;gene=yqgD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518814.1;locus_tag=AB25_RS32735;product=protein YqgD;protein_id=WP_001303651.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 196340 197494 . + . ID=gene-AB25_RS09160;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=AB25_RS09160;old_locus_tag=AB25_3379 NZ_JJMC01000055.1 Protein Homology CDS 196340 197494 . + 0 ID=cds-WP_001062128.1;Parent=gene-AB25_RS09160;Dbxref=GenBank:WP_001062128.1;Name=WP_001062128.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1;locus_tag=AB25_RS09160;product=methionine adenosyltransferase;protein_id=WP_001062128.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 197930 199324 . + . ID=gene-AB25_RS09155;Name=galP;gbkey=Gene;gene=galP;gene_biotype=protein_coding;locus_tag=AB25_RS09155;old_locus_tag=AB25_3381 NZ_JJMC01000055.1 Protein Homology CDS 197930 199324 . + 0 ID=cds-WP_001112301.1;Parent=gene-AB25_RS09155;Dbxref=GenBank:WP_001112301.1;Name=WP_001112301.1;gbkey=CDS;gene=galP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417418.1;locus_tag=AB25_RS09155;product=galactose/proton symporter;protein_id=WP_001112301.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 199401 199898 . + . ID=gene-AB25_RS09150;Name=yggI;gbkey=Gene;gene=yggI;gene_biotype=protein_coding;locus_tag=AB25_RS09150;old_locus_tag=AB25_3382 NZ_JJMC01000055.1 Protein Homology CDS 199401 199898 . + 0 ID=cds-WP_000858396.1;Parent=gene-AB25_RS09150;Dbxref=GenBank:WP_000858396.1;Name=WP_000858396.1;gbkey=CDS;gene=yggI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417419.1;locus_tag=AB25_RS09150;product=SprT family zinc-dependent metalloprotease;protein_id=WP_000858396.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 199993 200700 . + . ID=gene-AB25_RS09145;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;locus_tag=AB25_RS09145;old_locus_tag=AB25_3383 NZ_JJMC01000055.1 Protein Homology CDS 199993 200700 . + 0 ID=cds-WP_000286500.1;Parent=gene-AB25_RS09145;Dbxref=GenBank:WP_000286500.1;Name=WP_000286500.1;Ontology_term=GO:0004518;gbkey=CDS;gene=endA;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417420.1;locus_tag=AB25_RS09145;product=deoxyribonuclease I;protein_id=WP_000286500.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 200780 201511 . + . ID=gene-AB25_RS09140;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=AB25_RS09140;old_locus_tag=AB25_3384 NZ_JJMC01000055.1 Protein Homology CDS 200780 201511 . + 0 ID=cds-WP_001222508.1;Parent=gene-AB25_RS09140;Dbxref=GenBank:WP_001222508.1;Name=WP_001222508.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rsmE;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311849.2;locus_tag=AB25_RS09140;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_001222508.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 201524 202474 . + . ID=gene-AB25_RS09135;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=AB25_RS09135;old_locus_tag=AB25_3385 NZ_JJMC01000055.1 Protein Homology CDS 201524 202474 . + 0 ID=cds-WP_000593273.1;Parent=gene-AB25_RS09135;Dbxref=GenBank:WP_000593273.1;Name=WP_000593273.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417422.1;locus_tag=AB25_RS09135;product=glutathione synthase;protein_id=WP_000593273.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 202583 203146 . + . ID=gene-AB25_RS09130;Name=yqgE;gbkey=Gene;gene=yqgE;gene_biotype=protein_coding;locus_tag=AB25_RS09130;old_locus_tag=AB25_3386 NZ_JJMC01000055.1 Protein Homology CDS 202583 203146 . + 0 ID=cds-WP_001053178.1;Parent=gene-AB25_RS09130;Dbxref=GenBank:WP_001053178.1;Name=WP_001053178.1;gbkey=CDS;gene=yqgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417423.4;locus_tag=AB25_RS09130;product=YqgE/AlgH family protein;protein_id=WP_001053178.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 203146 203562 . + . ID=gene-AB25_RS09125;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=AB25_RS09125;old_locus_tag=AB25_3387 NZ_JJMC01000055.1 Protein Homology CDS 203146 203562 . + 0 ID=cds-WP_000017106.1;Parent=gene-AB25_RS09125;Dbxref=GenBank:WP_000017106.1;Name=WP_000017106.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417424.1;locus_tag=AB25_RS09125;product=Holliday junction resolvase RuvX;protein_id=WP_000017106.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 203725 204705 . - . ID=gene-AB25_RS09120;Name=yggR;gbkey=Gene;gene=yggR;gene_biotype=protein_coding;locus_tag=AB25_RS09120;old_locus_tag=AB25_3388 NZ_JJMC01000055.1 Protein Homology CDS 203725 204705 . - 0 ID=cds-WP_001324408.1;Parent=gene-AB25_RS09120;Dbxref=GenBank:WP_001324408.1;Name=WP_001324408.1;Ontology_term=GO:0043107,GO:0005524;gbkey=CDS;gene=yggR;go_function=ATP binding|0005524||IEA;go_process=type IV pilus-dependent motility|0043107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417425.2;locus_tag=AB25_RS09120;product=PilT/PilU family type 4a pilus ATPase;protein_id=WP_001324408.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 204723 205427 . + . ID=gene-AB25_RS09115;Name=yggS;gbkey=Gene;gene=yggS;gene_biotype=protein_coding;locus_tag=AB25_RS09115;old_locus_tag=AB25_3389 NZ_JJMC01000055.1 Protein Homology CDS 204723 205427 . + 0 ID=cds-WP_000997793.1;Parent=gene-AB25_RS09115;Dbxref=GenBank:WP_000997793.1;Name=WP_000997793.1;gbkey=CDS;gene=yggS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417426.1;locus_tag=AB25_RS09115;product=pyridoxal phosphate homeostasis protein;protein_id=WP_000997793.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 205445 206011 . + . ID=gene-AB25_RS09110;Name=yggT;gbkey=Gene;gene=yggT;gene_biotype=protein_coding;locus_tag=AB25_RS09110;old_locus_tag=AB25_3390 NZ_JJMC01000055.1 Protein Homology CDS 205445 206011 . + 0 ID=cds-WP_001094831.1;Parent=gene-AB25_RS09110;Dbxref=GenBank:WP_001094831.1;Name=WP_001094831.1;gbkey=CDS;gene=yggT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311855.1;locus_tag=AB25_RS09110;product=osmotic shock tolerance protein YggT;protein_id=WP_001094831.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 206008 206298 . + . ID=gene-AB25_RS09105;Name=yggU;gbkey=Gene;gene=yggU;gene_biotype=protein_coding;locus_tag=AB25_RS09105;old_locus_tag=AB25_3391 NZ_JJMC01000055.1 Protein Homology CDS 206008 206298 . + 0 ID=cds-WP_001277222.1;Parent=gene-AB25_RS09105;Dbxref=GenBank:WP_001277222.1;Name=WP_001277222.1;gbkey=CDS;gene=yggU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417428.2;locus_tag=AB25_RS09105;product=DUF167 family protein YggU;protein_id=WP_001277222.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 206306 206899 . + . ID=gene-AB25_RS09100;Name=rdgB;gbkey=Gene;gene=rdgB;gene_biotype=protein_coding;locus_tag=AB25_RS09100;old_locus_tag=AB25_3392 NZ_JJMC01000055.1 Protein Homology CDS 206306 206899 . + 0 ID=cds-WP_001174743.1;Parent=gene-AB25_RS09100;Dbxref=GenBank:WP_001174743.1;Name=WP_001174743.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;gene=rdgB;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311857.1;locus_tag=AB25_RS09100;product=XTP/dITP diphosphatase;protein_id=WP_001174743.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 206892 208028 . + . ID=gene-AB25_RS09095;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=AB25_RS09095;old_locus_tag=AB25_3393 NZ_JJMC01000055.1 Protein Homology CDS 206892 208028 . + 0 ID=cds-WP_032171204.1;Parent=gene-AB25_RS09095;Dbxref=GenBank:WP_032171204.1;Name=WP_032171204.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708720.1;locus_tag=AB25_RS09095;product=radical SAM family heme chaperone HemW;protein_id=WP_032171204.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 208183 209190 . - . ID=gene-AB25_RS09090;Name=yggM;gbkey=Gene;gene=yggM;gene_biotype=protein_coding;locus_tag=AB25_RS09090;old_locus_tag=AB25_3394 NZ_JJMC01000055.1 Protein Homology CDS 208183 209190 . - 0 ID=cds-WP_000745217.1;Parent=gene-AB25_RS09090;Dbxref=GenBank:WP_000745217.1;Name=WP_000745217.1;gbkey=CDS;gene=yggM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417431.1;locus_tag=AB25_RS09090;product=DUF1202 family protein;protein_id=WP_000745217.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 209307 210353 . - . ID=gene-AB25_RS09085;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=AB25_RS09085;old_locus_tag=AB25_3395 NZ_JJMC01000055.1 Protein Homology CDS 209307 210353 . - 0 ID=cds-WP_000394125.1;Parent=gene-AB25_RS09085;Dbxref=GenBank:WP_000394125.1;Name=WP_000394125.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;gene=ansB;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708728.1;locus_tag=AB25_RS09085;product=L-asparaginase 2;protein_id=WP_000394125.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 210529 211248 . - . ID=gene-AB25_RS09080;Name=yggN;gbkey=Gene;gene=yggN;gene_biotype=protein_coding;locus_tag=AB25_RS09080;old_locus_tag=AB25_3396 NZ_JJMC01000055.1 Protein Homology CDS 210529 211248 . - 0 ID=cds-WP_000984796.1;Parent=gene-AB25_RS09080;Dbxref=GenBank:WP_000984796.1;Name=WP_000984796.1;gbkey=CDS;gene=yggN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311861.1;locus_tag=AB25_RS09080;product=DUF2884 domain-containing protein;protein_id=WP_000984796.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 211432 211758 . - . ID=gene-AB25_RS09070;Name=yggL;gbkey=Gene;gene=yggL;gene_biotype=protein_coding;locus_tag=AB25_RS09070;old_locus_tag=AB25_3398 NZ_JJMC01000055.1 Protein Homology CDS 211432 211758 . - 0 ID=cds-WP_001107564.1;Parent=gene-AB25_RS09070;Dbxref=GenBank:WP_001107564.1;Name=WP_001107564.1;gbkey=CDS;gene=yggL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417434.4;locus_tag=AB25_RS09070;product=YggL family protein;protein_id=WP_001107564.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 211758 212477 . - . ID=gene-AB25_RS09065;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=AB25_RS09065;old_locus_tag=AB25_3399 NZ_JJMC01000055.1 Protein Homology CDS 211758 212477 . - 0 ID=cds-WP_000786911.1;Parent=gene-AB25_RS09065;Dbxref=GenBank:WP_000786911.1;Name=WP_000786911.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417435.1;locus_tag=AB25_RS09065;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_000786911.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 212638 213690 . + . ID=gene-AB25_RS09060;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=AB25_RS09060;old_locus_tag=AB25_3400 NZ_JJMC01000055.1 Protein Homology CDS 212638 213690 . + 0 ID=cds-WP_001295382.1;Parent=gene-AB25_RS09060;Dbxref=GenBank:WP_001295382.1;Name=WP_001295382.1;Ontology_term=GO:0006281,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311864.1;locus_tag=AB25_RS09060;product=A/G-specific adenine glycosylase;protein_id=WP_001295382.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 213718 213993 . + . ID=gene-AB25_RS09055;Name=yggX;gbkey=Gene;gene=yggX;gene_biotype=protein_coding;locus_tag=AB25_RS09055;old_locus_tag=AB25_3401 NZ_JJMC01000055.1 Protein Homology CDS 213718 213993 . + 0 ID=cds-WP_000091700.1;Parent=gene-AB25_RS09055;Dbxref=GenBank:WP_000091700.1;Name=WP_000091700.1;Ontology_term=GO:0005506;gbkey=CDS;gene=yggX;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311865.1;locus_tag=AB25_RS09055;product=oxidative damage protection protein;protein_id=WP_000091700.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 214058 215137 . + . ID=gene-AB25_RS09050;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=AB25_RS09050;old_locus_tag=AB25_3402 NZ_JJMC01000055.1 Protein Homology CDS 214058 215137 . + 0 ID=cds-WP_000760323.1;Parent=gene-AB25_RS09050;Dbxref=GenBank:WP_000760323.1;Name=WP_000760323.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltC;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417438.2;locus_tag=AB25_RS09050;product=membrane-bound lytic murein transglycosylase MltC;protein_id=WP_000760323.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 215339 216595 . + . ID=gene-AB25_RS09045;Name=nupG;gbkey=Gene;gene=nupG;gene_biotype=protein_coding;locus_tag=AB25_RS09045;old_locus_tag=AB25_3403 NZ_JJMC01000055.1 Protein Homology CDS 215339 216595 . + 0 ID=cds-WP_001049791.1;Parent=gene-AB25_RS09045;Dbxref=GenBank:WP_001049791.1;Name=WP_001049791.1;gbkey=CDS;gene=nupG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311867.2;locus_tag=AB25_RS09045;product=nucleoside permease NupG;protein_id=WP_001049791.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 216645 218780 . - . ID=gene-AB25_RS09040;Name=speC;gbkey=Gene;gene=speC;gene_biotype=protein_coding;locus_tag=AB25_RS09040;old_locus_tag=AB25_3404 NZ_JJMC01000055.1 Protein Homology CDS 216645 218780 . - 0 ID=cds-WP_000839748.1;Parent=gene-AB25_RS09040;Dbxref=GenBank:WP_000839748.1;Name=WP_000839748.1;gbkey=CDS;gene=speC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311868.2;locus_tag=AB25_RS09040;product=ornithine decarboxylase;protein_id=WP_000839748.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 218942 219025 . - . ID=gene-AB25_RS32290;Name=yqgH;gbkey=Gene;gene=yqgH;gene_biotype=protein_coding;locus_tag=AB25_RS32290 NZ_JJMC01000055.1 Protein Homology CDS 218942 219025 . - 0 ID=cds-WP_212591416.1;Parent=gene-AB25_RS32290;Dbxref=GenBank:WP_212591416.1;Name=WP_212591416.1;gbkey=CDS;gene=yqgH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051196.1;locus_tag=AB25_RS32290;product=hypothetical protein;protein_id=WP_212591416.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 219178 219885 . + . ID=gene-AB25_RS09035;Name=yqgA;gbkey=Gene;gene=yqgA;gene_biotype=protein_coding;locus_tag=AB25_RS09035;old_locus_tag=AB25_3405 NZ_JJMC01000055.1 Protein Homology CDS 219178 219885 . + 0 ID=cds-WP_000234526.1;Parent=gene-AB25_RS09035;Dbxref=GenBank:WP_000234526.1;Name=WP_000234526.1;gbkey=CDS;gene=yqgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417441.1;locus_tag=AB25_RS09035;product=DUF554 domain-containing protein;protein_id=WP_000234526.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 219991 220066 . + . ID=gene-AB25_RS09030;Name=AB25_RS09030;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS09030;old_locus_tag=AB25_3406 NZ_JJMC01000055.1 tRNAscan-SE tRNA 219991 220066 . + . ID=rna-AB25_RS09030;Parent=gene-AB25_RS09030;anticodon=(pos:220024..220026);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS09030;product=tRNA-Phe NZ_JJMC01000055.1 tRNAscan-SE exon 219991 220066 . + . ID=exon-AB25_RS09030-1;Parent=rna-AB25_RS09030;anticodon=(pos:220024..220026);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS09030;product=tRNA-Phe NZ_JJMC01000055.1 RefSeq gene 220215 220751 . - . ID=gene-AB25_RS09025;Name=yghD;gbkey=Gene;gene=yghD;gene_biotype=protein_coding;locus_tag=AB25_RS09025;old_locus_tag=AB25_3407 NZ_JJMC01000055.1 Protein Homology CDS 220215 220751 . - 0 ID=cds-WP_000942786.1;Parent=gene-AB25_RS09025;Dbxref=GenBank:WP_000942786.1;Name=WP_000942786.1;gbkey=CDS;gene=yghD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417442.1;locus_tag=AB25_RS09025;product=GspM family type II secretion system protein YghD;protein_id=WP_000942786.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 220753 221931 . - . ID=gene-AB25_RS09020;Name=gspL;gbkey=Gene;gene=gspL;gene_biotype=protein_coding;locus_tag=AB25_RS09020;old_locus_tag=AB25_3408 NZ_JJMC01000055.1 Protein Homology CDS 220753 221931 . - 0 ID=cds-WP_032173535.1;Parent=gene-AB25_RS09020;Dbxref=GenBank:WP_032173535.1;Name=WP_032173535.1;Ontology_term=GO:0015628,GO:0009276,GO:0015627;gbkey=CDS;gene=gspL;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000097227.1;locus_tag=AB25_RS09020;product=type II secretion system protein GspL;protein_id=WP_032173535.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 221928 222905 . - . ID=gene-AB25_RS09015;Name=gspK;gbkey=Gene;gene=gspK;gene_biotype=protein_coding;locus_tag=AB25_RS09015;old_locus_tag=AB25_3409 NZ_JJMC01000055.1 Protein Homology CDS 221928 222905 . - 0 ID=cds-WP_000633220.1;Parent=gene-AB25_RS09015;Dbxref=GenBank:WP_000633220.1;Name=WP_000633220.1;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=gspK;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001554494.1;locus_tag=AB25_RS09015;product=type II secretion system minor pseudopilin GspK;protein_id=WP_000633220.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 222908 223507 . - . ID=gene-AB25_RS09010;Name=gspJ;gbkey=Gene;gene=gspJ;gene_biotype=protein_coding;locus_tag=AB25_RS09010;old_locus_tag=AB25_3410 NZ_JJMC01000055.1 Protein Homology CDS 222908 223507 . - 0 ID=cds-WP_001255040.1;Parent=gene-AB25_RS09010;Dbxref=GenBank:WP_001255040.1;Name=WP_001255040.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspJ;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001691118.1;locus_tag=AB25_RS09010;product=type II secretion system minor pseudopilin GspJ;protein_id=WP_001255040.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 223504 223875 . - . ID=gene-AB25_RS09005;Name=gspI;gbkey=Gene;gene=gspI;gene_biotype=protein_coding;locus_tag=AB25_RS09005;old_locus_tag=AB25_3411 NZ_JJMC01000055.1 Protein Homology CDS 223504 223875 . - 0 ID=cds-WP_000820125.1;Parent=gene-AB25_RS09005;Dbxref=GenBank:WP_000820125.1;Name=WP_000820125.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspI;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001709020.1;locus_tag=AB25_RS09005;product=type II secretion system minor pseudopilin GspI;protein_id=WP_000820125.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 223872 224435 . - . ID=gene-AB25_RS09000;Name=gspH;gbkey=Gene;gene=gspH;gene_biotype=protein_coding;locus_tag=AB25_RS09000;old_locus_tag=AB25_3412 NZ_JJMC01000055.1 Protein Homology CDS 223872 224435 . - 0 ID=cds-WP_001115154.1;Parent=gene-AB25_RS09000;Dbxref=GenBank:WP_001115154.1;Name=WP_001115154.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspH;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001394829.1;locus_tag=AB25_RS09000;product=type II secretion system minor pseudopilin GspH;protein_id=WP_001115154.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 224439 224894 . - . ID=gene-AB25_RS08995;Name=gspG;gbkey=Gene;gene=gspG;gene_biotype=protein_coding;locus_tag=AB25_RS08995;old_locus_tag=AB25_3413 NZ_JJMC01000055.1 Protein Homology CDS 224439 224894 . - 0 ID=cds-WP_000287130.1;Parent=gene-AB25_RS08995;Dbxref=GenBank:WP_000287130.1;Name=WP_000287130.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspG;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912123.1;locus_tag=AB25_RS08995;product=type II secretion system major pseudopilin GspG;protein_id=WP_000287130.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 224911 226134 . - . ID=gene-AB25_RS08990;Name=gspF;gbkey=Gene;gene=gspF;gene_biotype=protein_coding;locus_tag=AB25_RS08990;old_locus_tag=AB25_3414 NZ_JJMC01000055.1 Protein Homology CDS 224911 226134 . - 0 ID=cds-WP_032171211.1;Parent=gene-AB25_RS08990;Dbxref=GenBank:WP_032171211.1;Name=WP_032171211.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspF;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001173399.1;locus_tag=AB25_RS08990;product=type II secretion system inner membrane protein GspF;protein_id=WP_032171211.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 226134 227627 . - . ID=gene-AB25_RS08985;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=AB25_RS08985;old_locus_tag=AB25_3415 NZ_JJMC01000055.1 Protein Homology CDS 226134 227627 . - 0 ID=cds-WP_000249348.1;Parent=gene-AB25_RS08985;Dbxref=GenBank:WP_000249348.1;Name=WP_000249348.1;Ontology_term=GO:0015628,GO:0005524,GO:0015627;gbkey=CDS;gene=gspE;go_component=type II protein secretion system complex|0015627||IEA;go_function=ATP binding|0005524||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525635.1;locus_tag=AB25_RS08985;product=type II secretion system ATPase GspE;protein_id=WP_000249348.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 227627 229687 . - . ID=gene-AB25_RS08980;Name=gspD;gbkey=Gene;gene=gspD;gene_biotype=protein_coding;locus_tag=AB25_RS08980;old_locus_tag=AB25_3416 NZ_JJMC01000055.1 Protein Homology CDS 227627 229687 . - 0 ID=cds-WP_000498824.1;Parent=gene-AB25_RS08980;Dbxref=GenBank:WP_000498824.1;Name=WP_000498824.1;Ontology_term=GO:0015628,GO:0015627,GO:0019867;gbkey=CDS;gene=gspD;go_component=type II protein secretion system complex|0015627||IEA,outer membrane|0019867||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020234996.1;locus_tag=AB25_RS08980;product=type II secretion system secretin GspD;protein_id=WP_000498824.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 229717 230676 . - . ID=gene-AB25_RS08975;Name=gspC;gbkey=Gene;gene=gspC;gene_biotype=protein_coding;locus_tag=AB25_RS08975;old_locus_tag=AB25_3417 NZ_JJMC01000055.1 Protein Homology CDS 229717 230676 . - 0 ID=cds-WP_000135067.1;Parent=gene-AB25_RS08975;Dbxref=GenBank:WP_000135067.1;Name=WP_000135067.1;gbkey=CDS;gene=gspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239656.1;locus_tag=AB25_RS08975;product=type II secretion system protein GspC;protein_id=WP_000135067.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 230694 231104 . - . ID=gene-AB25_RS08970;Name=gspS2;gbkey=Gene;gene=gspS2;gene_biotype=protein_coding;locus_tag=AB25_RS08970;old_locus_tag=AB25_3418 NZ_JJMC01000055.1 Protein Homology CDS 230694 231104 . - 0 ID=cds-WP_001324279.1;Parent=gene-AB25_RS08970;Dbxref=GenBank:WP_001324279.1;Name=WP_001324279.1;gbkey=CDS;gene=gspS2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417445.1;locus_tag=AB25_RS08970;product=type II secretion system pilot lipoprotein GspS-beta;protein_id=WP_001324279.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 231170 231979 . - . ID=gene-AB25_RS08965;Name=pppA;gbkey=Gene;gene=pppA;gene_biotype=protein_coding;locus_tag=AB25_RS08965;old_locus_tag=AB25_3419 NZ_JJMC01000055.1 Protein Homology CDS 231170 231979 . - 0 ID=cds-WP_001297673.1;Parent=gene-AB25_RS08965;Dbxref=GenBank:WP_001297673.1;Name=WP_001297673.1;gbkey=CDS;gene=pppA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417446.4;locus_tag=AB25_RS08965;product=prepilin peptidase PppA;protein_id=WP_001297673.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 232127 236692 . - . ID=gene-AB25_RS08960;Name=sslE;gbkey=Gene;gene=sslE;gene_biotype=protein_coding;locus_tag=AB25_RS08960;old_locus_tag=AB25_3420 NZ_JJMC01000055.1 Protein Homology CDS 232127 236692 . - 0 ID=cds-WP_032171213.1;Parent=gene-AB25_RS08960;Dbxref=GenBank:WP_032171213.1;Name=WP_032171213.1;gbkey=CDS;gene=sslE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026189.1;locus_tag=AB25_RS08960;product=lipoprotein metalloprotease SslE;protein_id=WP_032171213.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 237178 238860 . - . ID=gene-AB25_RS08955;Name=glcA;gbkey=Gene;gene=glcA;gene_biotype=protein_coding;locus_tag=AB25_RS08955;old_locus_tag=AB25_3422 NZ_JJMC01000055.1 Protein Homology CDS 237178 238860 . - 0 ID=cds-WP_000259303.1;Parent=gene-AB25_RS08955;Dbxref=GenBank:WP_000259303.1;Name=WP_000259303.1;gbkey=CDS;gene=glcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417449.1;locus_tag=AB25_RS08955;product=glycolate permease GlcA;protein_id=WP_000259303.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 239216 241387 . - . ID=gene-AB25_RS08950;Name=glcB;gbkey=Gene;gene=glcB;gene_biotype=protein_coding;locus_tag=AB25_RS08950;old_locus_tag=AB25_3423 NZ_JJMC01000055.1 Protein Homology CDS 239216 241387 . - 0 ID=cds-WP_000084077.1;Parent=gene-AB25_RS08950;Dbxref=GenBank:WP_000084077.1;Name=WP_000084077.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;gene=glcB;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417450.1;locus_tag=AB25_RS08950;product=malate synthase G;protein_id=WP_000084077.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 241409 241813 . - . ID=gene-AB25_RS08945;Name=glcG;gbkey=Gene;gene=glcG;gene_biotype=protein_coding;locus_tag=AB25_RS08945;old_locus_tag=AB25_3424 NZ_JJMC01000055.1 Protein Homology CDS 241409 241813 . - 0 ID=cds-WP_000853256.1;Parent=gene-AB25_RS08945;Dbxref=GenBank:WP_000853256.1;Name=WP_000853256.1;gbkey=CDS;gene=glcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417451.1;locus_tag=AB25_RS08945;product=GlcG family protein;protein_id=WP_000853256.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 241818 243041 . - . ID=gene-AB25_RS08940;Name=glcF;gbkey=Gene;gene=glcF;gene_biotype=protein_coding;locus_tag=AB25_RS08940;old_locus_tag=AB25_3425 NZ_JJMC01000055.1 Protein Homology CDS 241818 243041 . - 0 ID=cds-WP_001194666.1;Parent=gene-AB25_RS08940;Dbxref=GenBank:WP_001194666.1;Name=WP_001194666.1;Ontology_term=GO:0051536;gbkey=CDS;gene=glcF;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026190.1;locus_tag=AB25_RS08940;product=glycolate oxidase subunit GlcF;protein_id=WP_001194666.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 243052 244104 . - . ID=gene-AB25_RS08935;Name=glcE;gbkey=Gene;gene=glcE;gene_biotype=protein_coding;locus_tag=AB25_RS08935;old_locus_tag=AB25_3426 NZ_JJMC01000055.1 Protein Homology CDS 243052 244104 . - 0 ID=cds-WP_000943057.1;Parent=gene-AB25_RS08935;Dbxref=GenBank:WP_000943057.1;Name=WP_000943057.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;gene=glcE;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439281.1;locus_tag=AB25_RS08935;product=glycolate oxidase subunit GlcE;protein_id=WP_000943057.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 244104 245603 . - . ID=gene-AB25_RS08930;Name=glcD;gbkey=Gene;gene=glcD;gene_biotype=protein_coding;locus_tag=AB25_RS08930;old_locus_tag=AB25_3427 NZ_JJMC01000055.1 Protein Homology CDS 244104 245603 . - 0 ID=cds-WP_000026117.1;Parent=gene-AB25_RS08930;Dbxref=GenBank:WP_000026117.1;Name=WP_000026117.1;Ontology_term=GO:0003973,GO:0071949,GO:0009339;gbkey=CDS;gene=glcD;go_component=glycolate oxidase complex|0009339||IEA;go_function=(S)-2-hydroxy-acid oxidase activity|0003973||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417453.1;locus_tag=AB25_RS08930;product=glycolate oxidase subunit GlcD;protein_id=WP_000026117.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 245854 246618 . + . ID=gene-AB25_RS08925;Name=glcC;gbkey=Gene;gene=glcC;gene_biotype=protein_coding;locus_tag=AB25_RS08925;old_locus_tag=AB25_3428 NZ_JJMC01000055.1 Protein Homology CDS 245854 246618 . + 0 ID=cds-WP_001297764.1;Parent=gene-AB25_RS08925;Dbxref=GenBank:WP_001297764.1;Name=WP_001297764.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=glcC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417454.1;locus_tag=AB25_RS08925;product=transcriptional regulator GlcC;protein_id=WP_001297764.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 246625 247767 . - . ID=gene-AB25_RS08920;Name=yghO;gbkey=Gene;gene=yghO;gene_biotype=protein_coding;locus_tag=AB25_RS08920;old_locus_tag=AB25_3429 NZ_JJMC01000055.1 Protein Homology CDS 246625 247767 . - 0 ID=cds-WP_001324274.1;Parent=gene-AB25_RS08920;Dbxref=GenBank:WP_001324274.1;Name=WP_001324274.1;gbkey=CDS;gene=yghO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001327865.1;locus_tag=AB25_RS08920;product=protein YghO;protein_id=WP_001324274.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 248171 249859 . + . ID=gene-AB25_RS08915;Name=AB25_RS08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS08915;old_locus_tag=AB25_3430 NZ_JJMC01000055.1 Protein Homology CDS 248171 249859 . + 0 ID=cds-WP_032171215.1;Parent=gene-AB25_RS08915;Dbxref=GenBank:WP_032171215.1;Name=WP_032171215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001383581.1;locus_tag=AB25_RS08915;product=fatty acyl-AMP ligase;protein_id=WP_032171215.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 249856 250770 . + . ID=gene-AB25_RS08910;Name=AB25_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS08910;old_locus_tag=AB25_3431 NZ_JJMC01000055.1 Protein Homology CDS 249856 250770 . + 0 ID=cds-WP_032171217.1;Parent=gene-AB25_RS08910;Dbxref=GenBank:WP_032171217.1;Name=WP_032171217.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001481799.1;locus_tag=AB25_RS08910;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_032171217.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 250802 251050 . + . ID=gene-AB25_RS08905;Name=AB25_RS08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS08905;old_locus_tag=AB25_3432 NZ_JJMC01000055.1 Protein Homology CDS 250802 251050 . + 0 ID=cds-WP_000248097.1;Parent=gene-AB25_RS08905;Dbxref=GenBank:WP_000248097.1;Name=WP_000248097.1;Ontology_term=GO:0006633,GO:0009245,GO:0000035,GO:0000036;gbkey=CDS;go_function=acyl binding|0000035||IEA,acyl carrier activity|0000036||IEA;go_process=fatty acid biosynthetic process|0006633||IEA,lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708794.1;locus_tag=AB25_RS08905;product=acyl carrier protein;protein_id=WP_000248097.1;transl_table=11 NZ_JJMC01000055.1 RefSeq pseudogene 251050 252229 . + . ID=gene-AB25_RS08900;Name=spt;gbkey=Gene;gene=spt;gene_biotype=pseudogene;locus_tag=AB25_RS08900;old_locus_tag=AB25_3433;pseudo=true NZ_JJMC01000055.1 Protein Homology CDS 251050 252229 . + 0 ID=cds-AB25_RS08900;Parent=gene-AB25_RS08900;Note=frameshifted;Ontology_term=GO:0046513,GO:0004758,GO:0030170;gbkey=CDS;gene=spt;go_function=serine C-palmitoyltransferase activity|0004758||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=ceramide biosynthetic process|0046513||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239167.1;locus_tag=AB25_RS08900;product=serine palmitoyltransferase;pseudo=true;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 252265 253344 . - . ID=gene-AB25_RS08895;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=AB25_RS08895;old_locus_tag=AB25_3434 NZ_JJMC01000055.1 Protein Homology CDS 252265 253344 . - 0 ID=cds-WP_001299429.1;Parent=gene-AB25_RS08895;Dbxref=GenBank:WP_001299429.1;Name=WP_001299429.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708797.1;locus_tag=AB25_RS08895;product=LPS export ABC transporter permease LptG;protein_id=WP_001299429.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 253341 254411 . - . ID=gene-AB25_RS08890;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=AB25_RS08890;old_locus_tag=AB25_3435 NZ_JJMC01000055.1 Protein Homology CDS 253341 254411 . - 0 ID=cds-WP_000779652.1;Parent=gene-AB25_RS08890;Dbxref=GenBank:WP_000779652.1;Name=WP_000779652.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708798.1;locus_tag=AB25_RS08890;product=LPS export ABC transporter permease LptF;protein_id=WP_000779652.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 254442 255002 . - . ID=gene-AB25_RS08885;Name=AB25_RS08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS08885;old_locus_tag=AB25_3436 NZ_JJMC01000055.1 Protein Homology CDS 254442 255002 . - 0 ID=cds-WP_001298770.1;Parent=gene-AB25_RS08885;Dbxref=GenBank:WP_001298770.1;Name=WP_001298770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708799.2;locus_tag=AB25_RS08885;product=YtfJ family protein;protein_id=WP_001298770.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 255014 255838 . - . ID=gene-AB25_RS08880;Name=AB25_RS08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS08880;old_locus_tag=AB25_3437 NZ_JJMC01000055.1 Protein Homology CDS 255014 255838 . - 0 ID=cds-WP_032171219.1;Parent=gene-AB25_RS08880;Dbxref=GenBank:WP_032171219.1;Name=WP_032171219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708800.1;locus_tag=AB25_RS08880;product=hypothetical protein;protein_id=WP_032171219.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 255838 257187 . - . ID=gene-AB25_RS08875;Name=AB25_RS08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS08875;old_locus_tag=AB25_3438 NZ_JJMC01000055.1 Protein Homology CDS 255838 257187 . - 0 ID=cds-WP_000896853.1;Parent=gene-AB25_RS08875;Dbxref=GenBank:WP_000896853.1;Name=WP_000896853.1;Ontology_term=GO:0140327,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=flippase activity|0140327||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708801.1;locus_tag=AB25_RS08875;product=lipopolysaccharide biosynthesis protein;protein_id=WP_000896853.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 257233 257991 . - . ID=gene-AB25_RS08870;Name=AB25_RS08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS08870;old_locus_tag=AB25_3439 NZ_JJMC01000055.1 Protein Homology CDS 257233 257991 . - 0 ID=cds-WP_000339512.1;Parent=gene-AB25_RS08870;Dbxref=GenBank:WP_000339512.1;Name=WP_000339512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417458.1;locus_tag=AB25_RS08870;product=hypothetical protein;protein_id=WP_000339512.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 258023 258736 . - . ID=gene-AB25_RS08865;Name=yghS;gbkey=Gene;gene=yghS;gene_biotype=protein_coding;locus_tag=AB25_RS08865;old_locus_tag=AB25_3440 NZ_JJMC01000055.1 Protein Homology CDS 258023 258736 . - 0 ID=cds-WP_001076218.1;Parent=gene-AB25_RS08865;Dbxref=GenBank:WP_001076218.1;Name=WP_001076218.1;Ontology_term=GO:0006233,GO:0006235,GO:0016310,GO:0004798,GO:0005524;gbkey=CDS;gene=yghS;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA,dTTP biosynthetic process|0006235||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417459.1;locus_tag=AB25_RS08865;product=dTMP kinase;protein_id=WP_001076218.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 258910 259602 . + . ID=gene-AB25_RS08860;Name=yghT;gbkey=Gene;gene=yghT;gene_biotype=protein_coding;locus_tag=AB25_RS08860;old_locus_tag=AB25_3441 NZ_JJMC01000055.1 Protein Homology CDS 258910 259602 . + 0 ID=cds-WP_001190781.1;Parent=gene-AB25_RS08860;Dbxref=GenBank:WP_001190781.1;Name=WP_001190781.1;Ontology_term=GO:0006233,GO:0006235,GO:0016310,GO:0004798,GO:0005524;gbkey=CDS;gene=yghT;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA,dTTP biosynthetic process|0006235||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417460.1;locus_tag=AB25_RS08860;product=dTMP kinase;protein_id=WP_001190781.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 259651 261150 . - . ID=gene-AB25_RS08855;Name=pitB;gbkey=Gene;gene=pitB;gene_biotype=protein_coding;locus_tag=AB25_RS08855;old_locus_tag=AB25_3442 NZ_JJMC01000055.1 Protein Homology CDS 259651 261150 . - 0 ID=cds-WP_000933296.1;Parent=gene-AB25_RS08855;Dbxref=GenBank:WP_000933296.1;Name=WP_000933296.1;gbkey=CDS;gene=pitB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417461.1;locus_tag=AB25_RS08855;product=inorganic phosphate transporter PitB;protein_id=WP_000933296.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 261442 263301 . - . ID=gene-AB25_RS08850;Name=gss;gbkey=Gene;gene=gss;gene_biotype=protein_coding;locus_tag=AB25_RS08850;old_locus_tag=AB25_3444 NZ_JJMC01000055.1 Protein Homology CDS 261442 263301 . - 0 ID=cds-WP_032296104.1;Parent=gene-AB25_RS08850;Dbxref=GenBank:WP_032296104.1;Name=WP_032296104.1;gbkey=CDS;gene=gss;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417462.1;locus_tag=AB25_RS08850;product=bifunctional glutathionylspermidine amidase/synthase;protein_id=WP_032296104.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 263506 264372 . + . ID=gene-AB25_RS08845;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=protein_coding;locus_tag=AB25_RS08845;old_locus_tag=AB25_3445 NZ_JJMC01000055.1 Protein Homology CDS 263506 264372 . + 0 ID=cds-WP_001295515.1;Parent=gene-AB25_RS08845;Dbxref=GenBank:WP_001295515.1;Name=WP_001295515.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yghU;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311901.2;locus_tag=AB25_RS08845;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=WP_001295515.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 264495 264743 . - . ID=gene-AB25_RS08840;Name=hybG;gbkey=Gene;gene=hybG;gene_biotype=protein_coding;locus_tag=AB25_RS08840;old_locus_tag=AB25_3446 NZ_JJMC01000055.1 Protein Homology CDS 264495 264743 . - 0 ID=cds-WP_000334896.1;Parent=gene-AB25_RS08840;Dbxref=GenBank:WP_000334896.1;Name=WP_000334896.1;gbkey=CDS;gene=hybG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311902.1;locus_tag=AB25_RS08840;product=hydrogenase maturation factor HybG;protein_id=WP_000334896.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 264756 265097 . - . ID=gene-AB25_RS08835;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=AB25_RS08835;old_locus_tag=AB25_3447 NZ_JJMC01000055.1 Protein Homology CDS 264756 265097 . - 0 ID=cds-WP_001636662.1;Parent=gene-AB25_RS08835;Dbxref=GenBank:WP_001636662.1;Name=WP_001636662.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417465.1;locus_tag=AB25_RS08835;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_001636662.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 265090 265578 . - . ID=gene-AB25_RS08830;Name=hybE;gbkey=Gene;gene=hybE;gene_biotype=protein_coding;locus_tag=AB25_RS08830;old_locus_tag=AB25_3448 NZ_JJMC01000055.1 Protein Homology CDS 265090 265578 . - 0 ID=cds-WP_000134014.1;Parent=gene-AB25_RS08830;Dbxref=GenBank:WP_000134014.1;Name=WP_000134014.1;gbkey=CDS;gene=hybE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417466.1;locus_tag=AB25_RS08830;product=hydrogenase-2 assembly chaperone;protein_id=WP_000134014.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 265571 266065 . - . ID=gene-AB25_RS08825;Name=hybD;gbkey=Gene;gene=hybD;gene_biotype=protein_coding;locus_tag=AB25_RS08825;old_locus_tag=AB25_3449 NZ_JJMC01000055.1 Protein Homology CDS 265571 266065 . - 0 ID=cds-WP_001221953.1;Parent=gene-AB25_RS08825;Dbxref=GenBank:WP_001221953.1;Name=WP_001221953.1;gbkey=CDS;gene=hybD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311905.1;locus_tag=AB25_RS08825;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WP_001221953.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 266065 267768 . - . ID=gene-AB25_RS08820;Name=hybC;gbkey=Gene;gene=hybC;gene_biotype=protein_coding;locus_tag=AB25_RS08820;old_locus_tag=AB25_3450 NZ_JJMC01000055.1 Protein Homology CDS 266065 267768 . - 0 ID=cds-WP_000083065.1;Parent=gene-AB25_RS08820;Dbxref=GenBank:WP_000083065.1;Name=WP_000083065.1;Ontology_term=GO:0008901;gbkey=CDS;gene=hybC;go_function=ferredoxin hydrogenase activity|0008901||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311906.1;locus_tag=AB25_RS08820;product=hydrogenase 2 large subunit;protein_id=WP_000083065.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 267765 268943 . - . ID=gene-AB25_RS08815;Name=hybB;gbkey=Gene;gene=hybB;gene_biotype=protein_coding;locus_tag=AB25_RS08815;old_locus_tag=AB25_3451 NZ_JJMC01000055.1 Protein Homology CDS 267765 268943 . - 0 ID=cds-WP_001521358.1;Parent=gene-AB25_RS08815;Dbxref=GenBank:WP_001521358.1;Name=WP_001521358.1;gbkey=CDS;gene=hybB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417469.1;locus_tag=AB25_RS08815;product=Ni/Fe-hydrogenase cytochrome b subunit;protein_id=WP_001521358.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 268933 269919 . - . ID=gene-AB25_RS08810;Name=hybA;gbkey=Gene;gene=hybA;gene_biotype=protein_coding;locus_tag=AB25_RS08810;old_locus_tag=AB25_3452 NZ_JJMC01000055.1 Protein Homology CDS 268933 269919 . - 0 ID=cds-WP_001081870.1;Parent=gene-AB25_RS08810;Dbxref=GenBank:WP_001081870.1;Name=WP_001081870.1;gbkey=CDS;gene=hybA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311908.1;locus_tag=AB25_RS08810;product=hydrogenase 2 operon protein HybA;protein_id=WP_001081870.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 269922 271040 . - . ID=gene-AB25_RS08805;Name=hybO;gbkey=Gene;gene=hybO;gene_biotype=protein_coding;locus_tag=AB25_RS08805;old_locus_tag=AB25_3453 NZ_JJMC01000055.1 Protein Homology CDS 269922 271040 . - 0 ID=cds-WP_000145410.1;Parent=gene-AB25_RS08805;Dbxref=GenBank:WP_000145410.1;Name=WP_000145410.1;gbkey=CDS;gene=hybO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311909.1;locus_tag=AB25_RS08805;product=hydrogenase 2 small subunit;protein_id=WP_000145410.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 271229 271516 . - . ID=gene-AB25_RS08800;Name=yghW;gbkey=Gene;gene=yghW;gene_biotype=protein_coding;locus_tag=AB25_RS08800;old_locus_tag=AB25_3455 NZ_JJMC01000055.1 Protein Homology CDS 271229 271516 . - 0 ID=cds-WP_001059136.1;Parent=gene-AB25_RS08800;Dbxref=GenBank:WP_001059136.1;Name=WP_001059136.1;gbkey=CDS;gene=yghW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311910.1;locus_tag=AB25_RS08800;product=DUF2623 family protein YghW;protein_id=WP_001059136.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 271635 272522 . - . ID=gene-AB25_RS08795;Name=yghX;gbkey=Gene;gene=yghX;gene_biotype=protein_coding;locus_tag=AB25_RS08795;old_locus_tag=AB25_3456 NZ_JJMC01000055.1 Protein Homology CDS 271635 272522 . - 0 ID=cds-WP_001297303.1;Parent=gene-AB25_RS08795;Dbxref=GenBank:WP_001297303.1;Name=WP_001297303.1;gbkey=CDS;gene=yghX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311911.3;locus_tag=AB25_RS08795;product=YghX family hydrolase;protein_id=WP_001297303.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 272679 273719 . + . ID=gene-AB25_RS08790;Name=gpr;gbkey=Gene;gene=gpr;gene_biotype=protein_coding;locus_tag=AB25_RS08790;old_locus_tag=AB25_3457 NZ_JJMC01000055.1 Protein Homology CDS 272679 273719 . + 0 ID=cds-WP_000262154.1;Parent=gene-AB25_RS08790;Dbxref=GenBank:WP_000262154.1;Name=WP_000262154.1;gbkey=CDS;gene=gpr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708818.1;locus_tag=AB25_RS08790;product=L-glyceraldehyde 3-phosphate reductase;protein_id=WP_000262154.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 273759 274253 . - . ID=gene-AB25_RS08785;Name=yqhA;gbkey=Gene;gene=yqhA;gene_biotype=protein_coding;locus_tag=AB25_RS08785;old_locus_tag=AB25_3458 NZ_JJMC01000055.1 Protein Homology CDS 273759 274253 . - 0 ID=cds-WP_000439331.1;Parent=gene-AB25_RS08785;Dbxref=GenBank:WP_000439331.1;Name=WP_000439331.1;gbkey=CDS;gene=yqhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311913.1;locus_tag=AB25_RS08785;product=TIGR00645 family protein;protein_id=WP_000439331.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 274444 275328 . + . ID=gene-AB25_RS08780;Name=yghA;gbkey=Gene;gene=yghA;gene_biotype=protein_coding;locus_tag=AB25_RS08780;old_locus_tag=AB25_3459 NZ_JJMC01000055.1 Protein Homology CDS 274444 275328 . + 0 ID=cds-WP_000018760.1;Parent=gene-AB25_RS08780;Dbxref=GenBank:WP_000018760.1;Name=WP_000018760.1;gbkey=CDS;gene=yghA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311914.1;locus_tag=AB25_RS08780;product=NADP(+)-dependent aldehyde reductase;protein_id=WP_000018760.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 275600 276025 . - . ID=gene-AB25_RS08775;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=AB25_RS08775;old_locus_tag=AB25_3460 NZ_JJMC01000055.1 Protein Homology CDS 275600 276025 . - 0 ID=cds-WP_001240712.1;Parent=gene-AB25_RS08775;Dbxref=GenBank:WP_001240712.1;Name=WP_001240712.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbD;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311916.1;locus_tag=AB25_RS08775;product=TonB system transport protein ExbD;protein_id=WP_001240712.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 276032 276766 . - . ID=gene-AB25_RS08770;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=AB25_RS08770;old_locus_tag=AB25_3461 NZ_JJMC01000055.1 Protein Homology CDS 276032 276766 . - 0 ID=cds-WP_000527844.1;Parent=gene-AB25_RS08770;Dbxref=GenBank:WP_000527844.1;Name=WP_000527844.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311917.1;locus_tag=AB25_RS08770;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_000527844.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 277018 278205 . + . ID=gene-AB25_RS08765;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=AB25_RS08765;old_locus_tag=AB25_3462 NZ_JJMC01000055.1 Protein Homology CDS 277018 278205 . + 0 ID=cds-WP_001320425.1;Parent=gene-AB25_RS08765;Dbxref=GenBank:WP_001320425.1;Name=WP_001320425.1;Ontology_term=GO:0006520,GO:0019346,GO:0030170,GO:0047804;gbkey=CDS;gene=metC;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=amino acid metabolic process|0006520||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311919.1;locus_tag=AB25_RS08765;product=cystathionine beta-lyase;protein_id=WP_001320425.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 278345 279004 . + . ID=gene-AB25_RS08760;Name=yghB;gbkey=Gene;gene=yghB;gene_biotype=protein_coding;locus_tag=AB25_RS08760;old_locus_tag=AB25_3463 NZ_JJMC01000055.1 Protein Homology CDS 278345 279004 . + 0 ID=cds-WP_000268419.1;Parent=gene-AB25_RS08760;Dbxref=GenBank:WP_000268419.1;Name=WP_000268419.1;gbkey=CDS;gene=yghB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311920.1;locus_tag=AB25_RS08760;product=DedA family general envelope maintenance protein YghB;protein_id=WP_000268419.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 279044 279943 . - . ID=gene-AB25_RS08755;Name=yqhC;gbkey=Gene;gene=yqhC;gene_biotype=protein_coding;locus_tag=AB25_RS08755;old_locus_tag=AB25_3464 NZ_JJMC01000055.1 Protein Homology CDS 279044 279943 . - 0 ID=cds-WP_000817717.1;Parent=gene-AB25_RS08755;Dbxref=GenBank:WP_000817717.1;Name=WP_000817717.1;gbkey=CDS;gene=yqhC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001407451.1;locus_tag=AB25_RS08755;product=DNA-binding transcriptional regulator YqhC;protein_id=WP_000817717.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 280137 281300 . + . ID=gene-AB25_RS08750;Name=yqhD;gbkey=Gene;gene=yqhD;gene_biotype=protein_coding;locus_tag=AB25_RS08750;old_locus_tag=AB25_3465 NZ_JJMC01000055.1 Protein Homology CDS 280137 281300 . + 0 ID=cds-WP_001058813.1;Parent=gene-AB25_RS08750;Dbxref=GenBank:WP_001058813.1;Name=WP_001058813.1;Ontology_term=GO:0046872,GO:1990362;gbkey=CDS;gene=yqhD;go_function=metal ion binding|0046872||IEA,butanol dehydrogenase (NAD+) activity|1990362||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417484.1;locus_tag=AB25_RS08750;product=alcohol dehydrogenase;protein_id=WP_001058813.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 281405 282232 . + . ID=gene-AB25_RS08745;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=AB25_RS08745;old_locus_tag=AB25_3466 NZ_JJMC01000055.1 Protein Homology CDS 281405 282232 . + 0 ID=cds-WP_000013149.1;Parent=gene-AB25_RS08745;Dbxref=GenBank:WP_000013149.1;Name=WP_000013149.1;Ontology_term=GO:0050580;gbkey=CDS;gene=dkgA;go_function=2%2C5-didehydrogluconate reductase activity|0050580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417485.4;locus_tag=AB25_RS08745;product=2%2C5-didehydrogluconate reductase DkgA;protein_id=WP_000013149.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 282432 283358 . + . ID=gene-AB25_RS08740;Name=yqhG;gbkey=Gene;gene=yqhG;gene_biotype=protein_coding;locus_tag=AB25_RS08740;old_locus_tag=AB25_3468 NZ_JJMC01000055.1 Protein Homology CDS 282432 283358 . + 0 ID=cds-WP_000691598.1;Parent=gene-AB25_RS08740;Dbxref=GenBank:WP_000691598.1;Name=WP_000691598.1;gbkey=CDS;gene=yqhG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026195.1;locus_tag=AB25_RS08740;product=YbjP/YqhG family protein;protein_id=WP_000691598.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 283409 283666 . + . ID=gene-AB25_RS08735;Name=yqhH;gbkey=Gene;gene=yqhH;gene_biotype=protein_coding;locus_tag=AB25_RS08735;old_locus_tag=AB25_3469 NZ_JJMC01000055.1 Protein Homology CDS 283409 283666 . + 0 ID=cds-WP_024241229.1;Parent=gene-AB25_RS08735;Dbxref=GenBank:WP_024241229.1;Name=WP_024241229.1;gbkey=CDS;gene=yqhH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417487.1;locus_tag=AB25_RS08735;product=lipoprotein YqhH;protein_id=WP_024241229.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 283709 285928 . - . ID=gene-AB25_RS08730;Name=ygiQ;gbkey=Gene;gene=ygiQ;gene_biotype=protein_coding;locus_tag=AB25_RS08730;old_locus_tag=AB25_3470 NZ_JJMC01000055.1 Protein Homology CDS 283709 285928 . - 0 ID=cds-WP_000095187.1;Parent=gene-AB25_RS08730;Dbxref=GenBank:WP_000095187.1;Name=WP_000095187.1;Ontology_term=GO:1904047;gbkey=CDS;gene=ygiQ;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026196.1;locus_tag=AB25_RS08730;product=YgiQ family radical SAM protein;protein_id=WP_000095187.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 286039 287451 . - . ID=gene-AB25_RS08725;Name=ftsP;gbkey=Gene;gene=ftsP;gene_biotype=protein_coding;locus_tag=AB25_RS08725;old_locus_tag=AB25_3471 NZ_JJMC01000055.1 Protein Homology CDS 286039 287451 . - 0 ID=cds-WP_000059395.1;Parent=gene-AB25_RS08725;Dbxref=GenBank:WP_000059395.1;Name=WP_000059395.1;Ontology_term=GO:0043093,GO:0016491;gbkey=CDS;gene=ftsP;go_function=oxidoreductase activity|0016491||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311928.1;locus_tag=AB25_RS08725;product=cell division protein FtsP;protein_id=WP_000059395.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 287526 288263 . - . ID=gene-AB25_RS08720;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;gene_synonym=parF;locus_tag=AB25_RS08720;old_locus_tag=AB25_3472 NZ_JJMC01000055.1 Protein Homology CDS 287526 288263 . - 0 ID=cds-WP_000965712.1;Parent=gene-AB25_RS08720;Dbxref=GenBank:WP_000965712.1;Name=WP_000965712.1;gbkey=CDS;gene=plsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311929.1;locus_tag=AB25_RS08720;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=WP_000965712.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 288497 290755 . - . ID=gene-AB25_RS08715;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=AB25_RS08715;old_locus_tag=AB25_3473 NZ_JJMC01000055.1 Protein Homology CDS 288497 290755 . - 0 ID=cds-WP_032256698.1;Parent=gene-AB25_RS08715;Dbxref=GenBank:WP_032256698.1;Name=WP_032256698.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311930.1;locus_tag=AB25_RS08715;product=DNA topoisomerase IV subunit A;protein_id=WP_032256698.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 290893 292500 . - . ID=gene-AB25_RS08710;Name=ygiS;gbkey=Gene;gene=ygiS;gene_biotype=protein_coding;locus_tag=AB25_RS08710;old_locus_tag=AB25_3474 NZ_JJMC01000055.1 Protein Homology CDS 290893 292500 . - 0 ID=cds-WP_001324265.1;Parent=gene-AB25_RS08710;Dbxref=GenBank:WP_001324265.1;Name=WP_001324265.1;gbkey=CDS;gene=ygiS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417492.1;locus_tag=AB25_RS08710;product=ABC transporter substrate-binding protein;protein_id=WP_001324265.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 292633 293028 . - . ID=gene-AB25_RS08705;Name=mqsA;gbkey=Gene;gene=mqsA;gene_biotype=protein_coding;locus_tag=AB25_RS08705;old_locus_tag=AB25_3475 NZ_JJMC01000055.1 Protein Homology CDS 292633 293028 . - 0 ID=cds-WP_000650107.1;Parent=gene-AB25_RS08705;Dbxref=GenBank:WP_000650107.1;Name=WP_000650107.1;gbkey=CDS;gene=mqsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417493.1;locus_tag=AB25_RS08705;product=type II toxin-antitoxin system antitoxin MqsA;protein_id=WP_000650107.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 293030 293326 . - . ID=gene-AB25_RS0125995;Name=mqsR;gbkey=Gene;gene=mqsR;gene_biotype=protein_coding;locus_tag=AB25_RS0125995 NZ_JJMC01000055.1 Protein Homology CDS 293030 293326 . - 0 ID=cds-WP_000415584.1;Parent=gene-AB25_RS0125995;Dbxref=GenBank:WP_000415584.1;Name=WP_000415584.1;gbkey=CDS;gene=mqsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417494.1;locus_tag=AB25_RS0125995;product=type II toxin-antitoxin system toxin MqsR;protein_id=WP_000415584.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 293531 294013 . - . ID=gene-AB25_RS08700;Name=ygiV;gbkey=Gene;gene=ygiV;gene_biotype=protein_coding;locus_tag=AB25_RS08700;old_locus_tag=AB25_3476 NZ_JJMC01000055.1 Protein Homology CDS 293531 294013 . - 0 ID=cds-WP_000183494.1;Parent=gene-AB25_RS08700;Dbxref=GenBank:WP_000183494.1;Name=WP_000183494.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;gene=ygiV;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708835.1;locus_tag=AB25_RS08700;product=AraC family transcriptional regulator;protein_id=WP_000183494.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 294066 294458 . - . ID=gene-AB25_RS08695;Name=ygiW;gbkey=Gene;gene=ygiW;gene_biotype=protein_coding;locus_tag=AB25_RS08695;old_locus_tag=AB25_3477 NZ_JJMC01000055.1 Protein Homology CDS 294066 294458 . - 0 ID=cds-WP_000712658.1;Parent=gene-AB25_RS08695;Dbxref=GenBank:WP_000712658.1;Name=WP_000712658.1;gbkey=CDS;gene=ygiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311933.1;locus_tag=AB25_RS08695;product=OB fold stress tolerance protein YgiW;protein_id=WP_000712658.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 294610 295269 . + . ID=gene-AB25_RS08690;Name=qseB;gbkey=Gene;gene=qseB;gene_biotype=protein_coding;locus_tag=AB25_RS08690;old_locus_tag=AB25_3478 NZ_JJMC01000055.1 Protein Homology CDS 294610 295269 . + 0 ID=cds-WP_032171227.1;Parent=gene-AB25_RS08690;Dbxref=GenBank:WP_032171227.1;Name=WP_032171227.1;gbkey=CDS;gene=qseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311934.1;locus_tag=AB25_RS08690;product=quorum sensing response regulator transcription factor QseB;protein_id=WP_032171227.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 295266 296615 . + . ID=gene-AB25_RS08685;Name=qseC;gbkey=Gene;gene=qseC;gene_biotype=protein_coding;locus_tag=AB25_RS08685;old_locus_tag=AB25_3479 NZ_JJMC01000055.1 Protein Homology CDS 295266 296615 . + 0 ID=cds-WP_000673406.1;Parent=gene-AB25_RS08685;Dbxref=GenBank:WP_000673406.1;Name=WP_000673406.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=qseC;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417498.1;locus_tag=AB25_RS08685;product=quorum sensing histidine kinase QseC;protein_id=WP_000673406.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 296725 297306 . + . ID=gene-AB25_RS08680;Name=mdaB;gbkey=Gene;gene=mdaB;gene_biotype=protein_coding;locus_tag=AB25_RS08680;old_locus_tag=AB25_3480 NZ_JJMC01000055.1 Protein Homology CDS 296725 297306 . + 0 ID=cds-WP_000065430.1;Parent=gene-AB25_RS08680;Dbxref=GenBank:WP_000065430.1;Name=WP_000065430.1;gbkey=CDS;gene=mdaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311937.1;locus_tag=AB25_RS08680;product=NADPH:quinone oxidoreductase MdaB;protein_id=WP_000065430.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 297337 297651 . + . ID=gene-AB25_RS08675;Name=ygiN;gbkey=Gene;gene=ygiN;gene_biotype=protein_coding;locus_tag=AB25_RS08675;old_locus_tag=AB25_3481 NZ_JJMC01000055.1 Protein Homology CDS 297337 297651 . + 0 ID=cds-WP_000958598.1;Parent=gene-AB25_RS08675;Dbxref=GenBank:WP_000958598.1;Name=WP_000958598.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;gene=ygiN;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311938.1;locus_tag=AB25_RS08675;product=putative quinol monooxygenase;protein_id=WP_000958598.1;transl_table=11 NZ_JJMC01000055.1 RefSeq pseudogene 297695 299026 . - . ID=gene-AB25_RS0126000;Name=AB25_RS0126000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS0126000;pseudo=true NZ_JJMC01000055.1 Protein Homology CDS 297695 299026 . - 0 ID=cds-AB25_RS0126000;Parent=gene-AB25_RS0126000;Note=internal stop;Ontology_term=GO:0008643,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000778885.1;locus_tag=AB25_RS0126000;product=MFS transporter;pseudo=true;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 299313 300065 . + . ID=gene-AB25_RS08670;Name=AB25_RS08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS08670;old_locus_tag=AB25_3485 NZ_JJMC01000055.1 Protein Homology CDS 299313 300065 . + 0 ID=cds-WP_000619462.1;Parent=gene-AB25_RS08670;Dbxref=GenBank:WP_000619462.1;Name=WP_000619462.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000591154.1;locus_tag=AB25_RS08670;product=GntR family transcriptional regulator;protein_id=WP_000619462.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 300079 301155 . + . ID=gene-AB25_RS08665;Name=AB25_RS08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS08665;old_locus_tag=AB25_3486 NZ_JJMC01000055.1 Protein Homology CDS 300079 301155 . + 0 ID=cds-WP_001033123.1;Parent=gene-AB25_RS08665;Dbxref=GenBank:WP_001033123.1;Name=WP_001033123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033125.1;locus_tag=AB25_RS08665;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_001033123.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 301155 302153 . + . ID=gene-AB25_RS08660;Name=AB25_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS08660;old_locus_tag=AB25_3487 NZ_JJMC01000055.1 Protein Homology CDS 301155 302153 . + 0 ID=cds-WP_001356238.1;Parent=gene-AB25_RS08660;Dbxref=GenBank:WP_001356238.1;Name=WP_001356238.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774999.1;locus_tag=AB25_RS08660;product=SIS domain-containing protein;protein_id=WP_001356238.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 302158 303072 . + . ID=gene-AB25_RS08655;Name=AB25_RS08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS08655;old_locus_tag=AB25_3488 NZ_JJMC01000055.1 Protein Homology CDS 302158 303072 . + 0 ID=cds-WP_000712975.1;Parent=gene-AB25_RS08655;Dbxref=GenBank:WP_000712975.1;Name=WP_000712975.1;Ontology_term=GO:0005975,GO:0016310,GO:0005524,GO:0016301,GO:0016773,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA,carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000712975.1;locus_tag=AB25_RS08655;product=carbohydrate kinase family protein;protein_id=WP_000712975.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 303100 303336 . + . ID=gene-AB25_RS32510;Name=AB25_RS32510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32510;old_locus_tag=AB25_3489 NZ_JJMC01000055.1 Protein Homology CDS 303100 303336 . + 0 ID=cds-WP_000702794.1;Parent=gene-AB25_RS32510;Dbxref=GenBank:WP_000702794.1;Name=WP_000702794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000702794.1;locus_tag=AB25_RS32510;product=hypothetical protein;protein_id=WP_000702794.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 303282 304223 . + . ID=gene-AB25_RS08645;Name=AB25_RS08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS08645;old_locus_tag=AB25_3490 NZ_JJMC01000055.1 Protein Homology CDS 303282 304223 . + 0 ID=cds-WP_230989716.1;Parent=gene-AB25_RS08645;Dbxref=GenBank:WP_230989716.1;Name=WP_230989716.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024841.6;locus_tag=AB25_RS08645;product=esterase-like activity of phytase family protein;protein_id=WP_230989716.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 304319 305053 . + . ID=gene-AB25_RS08640;Name=AB25_RS08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS08640;old_locus_tag=AB25_3491 NZ_JJMC01000055.1 Protein Homology CDS 304319 305053 . + 0 ID=cds-WP_001603640.1;Parent=gene-AB25_RS08640;Dbxref=GenBank:WP_001603640.1;Name=WP_001603640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001317336.1;locus_tag=AB25_RS08640;product=outer membrane insertion C-terminal signal domain protein;protein_id=WP_001603640.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 305067 305852 . + . ID=gene-AB25_RS08635;Name=AB25_RS08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS08635;old_locus_tag=AB25_3492 NZ_JJMC01000055.1 Protein Homology CDS 305067 305852 . + 0 ID=cds-WP_249402586.1;Parent=gene-AB25_RS08635;Dbxref=GenBank:WP_249402586.1;Name=WP_249402586.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022472.6;locus_tag=AB25_RS08635;product=DUF2608 domain-containing protein;protein_id=WP_249402586.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 305981 307873 . - . ID=gene-AB25_RS08630;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=AB25_RS08630;old_locus_tag=AB25_3494 NZ_JJMC01000055.1 Protein Homology CDS 305981 307873 . - 0 ID=cds-WP_000195296.1;Parent=gene-AB25_RS08630;Dbxref=GenBank:WP_000195296.1;Name=WP_000195296.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417502.1;locus_tag=AB25_RS08630;product=DNA topoisomerase IV subunit B;protein_id=WP_000195296.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 307902 308483 . - . ID=gene-AB25_RS08625;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;locus_tag=AB25_RS08625;old_locus_tag=AB25_3495 NZ_JJMC01000055.1 Protein Homology CDS 307902 308483 . - 0 ID=cds-WP_000105733.1;Parent=gene-AB25_RS08625;Dbxref=GenBank:WP_000105733.1;Name=WP_000105733.1;gbkey=CDS;gene=yqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311946.1;locus_tag=AB25_RS08625;product=esterase YqiA;protein_id=WP_000105733.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 308483 309310 . - . ID=gene-AB25_RS08620;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=AB25_RS08620;old_locus_tag=AB25_3496 NZ_JJMC01000055.1 Protein Homology CDS 308483 309310 . - 0 ID=cds-WP_000444747.1;Parent=gene-AB25_RS08620;Dbxref=GenBank:WP_000444747.1;Name=WP_000444747.1;Ontology_term=GO:0004115;gbkey=CDS;gene=cpdA;go_function=3'%2C5'-cyclic-AMP phosphodiesterase activity|0004115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311947.1;locus_tag=AB25_RS08620;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=WP_000444747.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 309335 309757 . - . ID=gene-AB25_RS08615;Name=yqiB;gbkey=Gene;gene=yqiB;gene_biotype=protein_coding;locus_tag=AB25_RS08615;old_locus_tag=AB25_3497 NZ_JJMC01000055.1 Protein Homology CDS 309335 309757 . - 0 ID=cds-WP_000833393.1;Parent=gene-AB25_RS08615;Dbxref=GenBank:WP_000833393.1;Name=WP_000833393.1;gbkey=CDS;gene=yqiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311948.1;locus_tag=AB25_RS08615;product=DUF1249 family protein;protein_id=WP_000833393.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 309758 310387 . - . ID=gene-AB25_RS08610;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=AB25_RS08610;old_locus_tag=AB25_3498 NZ_JJMC01000055.1 Protein Homology CDS 309758 310387 . - 0 ID=cds-WP_000917130.1;Parent=gene-AB25_RS08610;Dbxref=GenBank:WP_000917130.1;Name=WP_000917130.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;gene=nudF;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311949.1;locus_tag=AB25_RS08610;product=ADP-ribose diphosphatase;protein_id=WP_000917130.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 310592 312073 . + . ID=gene-AB25_RS08605;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;locus_tag=AB25_RS08605;old_locus_tag=AB25_3499 NZ_JJMC01000055.1 Protein Homology CDS 310592 312073 . + 0 ID=cds-WP_000735278.1;Parent=gene-AB25_RS08605;Dbxref=GenBank:WP_000735278.1;Name=WP_000735278.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;gene=tolC;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417507.2;locus_tag=AB25_RS08605;product=outer membrane channel protein TolC;protein_id=WP_000735278.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 312221 312892 . + . ID=gene-AB25_RS08600;Name=ygiB;gbkey=Gene;gene=ygiB;gene_biotype=protein_coding;locus_tag=AB25_RS08600;old_locus_tag=AB25_3500 NZ_JJMC01000055.1 Protein Homology CDS 312221 312892 . + 0 ID=cds-WP_000831543.1;Parent=gene-AB25_RS08600;Dbxref=GenBank:WP_000831543.1;Name=WP_000831543.1;gbkey=CDS;gene=ygiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417509.3;locus_tag=AB25_RS08600;product=DUF1190 family protein;protein_id=WP_000831543.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 312898 314058 . + . ID=gene-AB25_RS08595;Name=ygiC;gbkey=Gene;gene=ygiC;gene_biotype=protein_coding;locus_tag=AB25_RS08595;old_locus_tag=AB25_3501 NZ_JJMC01000055.1 Protein Homology CDS 312898 314058 . + 0 ID=cds-WP_000442860.1;Parent=gene-AB25_RS08595;Dbxref=GenBank:WP_000442860.1;Name=WP_000442860.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;gene=ygiC;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123077.1;locus_tag=AB25_RS08595;product=glutathionylspermidine synthase family protein;protein_id=WP_000442860.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 314096 314884 . - . ID=gene-AB25_RS08590;Name=ygiD;gbkey=Gene;gene=ygiD;gene_biotype=protein_coding;locus_tag=AB25_RS08590;old_locus_tag=AB25_3502 NZ_JJMC01000055.1 Protein Homology CDS 314096 314884 . - 0 ID=cds-WP_001356237.1;Parent=gene-AB25_RS08590;Dbxref=GenBank:WP_001356237.1;Name=WP_001356237.1;gbkey=CDS;gene=ygiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001356237.1;locus_tag=AB25_RS08590;product=4%2C5-DOPA dioxygenase extradiol;protein_id=WP_001356237.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 315027 315800 . + . ID=gene-AB25_RS08585;Name=zupT;gbkey=Gene;gene=zupT;gene_biotype=protein_coding;locus_tag=AB25_RS08585;old_locus_tag=AB25_3503 NZ_JJMC01000055.1 Protein Homology CDS 315027 315800 . + 0 ID=cds-WP_032171231.1;Parent=gene-AB25_RS08585;Dbxref=GenBank:WP_032171231.1;Name=WP_032171231.1;gbkey=CDS;gene=zupT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311955.1;locus_tag=AB25_RS08585;product=zinc transporter ZupT;protein_id=WP_032171231.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 315858 316028 . - . ID=gene-AB25_RS08580;Name=yqiD;gbkey=Gene;gene=yqiD;gene_biotype=protein_coding;locus_tag=AB25_RS08580;old_locus_tag=AB25_3504 NZ_JJMC01000055.1 Protein Homology CDS 315858 316028 . - 0 ID=cds-WP_000469266.1;Parent=gene-AB25_RS08580;Dbxref=GenBank:WP_000469266.1;Name=WP_000469266.1;gbkey=CDS;gene=yqiD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518818.1;locus_tag=AB25_RS08580;product=protein YqiD;protein_id=WP_000469266.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 316289 316942 . - . ID=gene-AB25_RS08575;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=AB25_RS08575;old_locus_tag=AB25_3505 NZ_JJMC01000055.1 Protein Homology CDS 316289 316942 . - 0 ID=cds-WP_001076986.1;Parent=gene-AB25_RS08575;Dbxref=GenBank:WP_001076986.1;Name=WP_001076986.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311956.1;locus_tag=AB25_RS08575;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_001076986.1;transl_table=11 NZ_JJMC01000055.1 cmsearch riboswitch 317046 317194 . - . ID=id-NZ_JJMC01000055.1:317046..317194;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JJMC01000055.1 RefSeq gene 317316 317606 . + . ID=gene-AB25_RS08570;Name=ubiK;gbkey=Gene;gene=ubiK;gene_biotype=protein_coding;gene_synonym=yqiC;locus_tag=AB25_RS08570;old_locus_tag=AB25_3506 NZ_JJMC01000055.1 Protein Homology CDS 317316 317606 . + 0 ID=cds-WP_001297598.1;Parent=gene-AB25_RS08570;Dbxref=GenBank:WP_001297598.1;Name=WP_001297598.1;Ontology_term=GO:0006744,GO:0042802;gbkey=CDS;gene=ubiK;go_function=identical protein binding|0042802||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417514.4;locus_tag=AB25_RS08570;product=ubiquinone biosynthesis accessory factor UbiK;protein_id=WP_001297598.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 317889 318440 . + . ID=gene-AB25_RS08565;Name=ygiL;gbkey=Gene;gene=ygiL;gene_biotype=protein_coding;locus_tag=AB25_RS08565;old_locus_tag=AB25_3507 NZ_JJMC01000055.1 Protein Homology CDS 317889 318440 . + 0 ID=cds-WP_001272138.1;Parent=gene-AB25_RS08565;Dbxref=GenBank:WP_001272138.1;Name=WP_001272138.1;gbkey=CDS;gene=ygiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417515.1;locus_tag=AB25_RS08565;product=fimbrial-like protein;protein_id=WP_001272138.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 318500 321004 . + . ID=gene-AB25_RS08560;Name=AB25_RS08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS08560;old_locus_tag=AB25_3508 NZ_JJMC01000055.1 Protein Homology CDS 318500 321004 . + 0 ID=cds-WP_000277119.1;Parent=gene-AB25_RS08560;Dbxref=GenBank:WP_000277119.1;Name=WP_000277119.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001480735.1;locus_tag=AB25_RS08560;product=fimbria/pilus outer membrane usher protein;protein_id=WP_000277119.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 321020 321769 . + . ID=gene-AB25_RS08555;Name=yqiH;gbkey=Gene;gene=yqiH;gene_biotype=protein_coding;locus_tag=AB25_RS08555;old_locus_tag=AB25_3509 NZ_JJMC01000055.1 Protein Homology CDS 321020 321769 . + 0 ID=cds-WP_001269825.1;Parent=gene-AB25_RS08555;Dbxref=GenBank:WP_001269825.1;Name=WP_001269825.1;Ontology_term=GO:0043711,GO:0061077,GO:0030288;gbkey=CDS;gene=yqiH;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=pilus organization|0043711||IEA,chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417519.4;locus_tag=AB25_RS08555;product=fimbrial biogenesis chaperone;protein_id=WP_001269825.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 321771 322835 . + . ID=gene-AB25_RS08550;Name=yqiI;gbkey=Gene;gene=yqiI;gene_biotype=protein_coding;locus_tag=AB25_RS08550;old_locus_tag=AB25_3510 NZ_JJMC01000055.1 Protein Homology CDS 321771 322835 . + 0 ID=cds-WP_001269797.1;Parent=gene-AB25_RS08550;Dbxref=GenBank:WP_001269797.1;Name=WP_001269797.1;gbkey=CDS;gene=yqiI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417520.1;locus_tag=AB25_RS08550;product=fimbrial protein;protein_id=WP_001269797.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 322878 323078 . - . ID=gene-AB25_RS08545;Name=glgS;gbkey=Gene;gene=glgS;gene_biotype=protein_coding;locus_tag=AB25_RS08545;old_locus_tag=AB25_3511 NZ_JJMC01000055.1 Protein Homology CDS 322878 323078 . - 0 ID=cds-WP_000350095.1;Parent=gene-AB25_RS08545;Dbxref=GenBank:WP_000350095.1;Name=WP_000350095.1;gbkey=CDS;gene=glgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417521.1;locus_tag=AB25_RS08545;product=cell surface composition regulator GlgS;protein_id=WP_000350095.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 323347 323976 . + . ID=gene-AB25_RS08540;Name=yqiJ;gbkey=Gene;gene=yqiJ;gene_biotype=protein_coding;locus_tag=AB25_RS08540;old_locus_tag=AB25_3512 NZ_JJMC01000055.1 Protein Homology CDS 323347 323976 . + 0 ID=cds-WP_000599947.1;Parent=gene-AB25_RS08540;Dbxref=GenBank:WP_000599947.1;Name=WP_000599947.1;gbkey=CDS;gene=yqiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417522.1;locus_tag=AB25_RS08540;product=OB-fold-containig protein;protein_id=WP_000599947.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 324003 325664 . + . ID=gene-AB25_RS08535;Name=yqiK;gbkey=Gene;gene=yqiK;gene_biotype=protein_coding;locus_tag=AB25_RS08535;old_locus_tag=AB25_3513 NZ_JJMC01000055.1 Protein Homology CDS 324003 325664 . + 0 ID=cds-WP_000341046.1;Parent=gene-AB25_RS08535;Dbxref=GenBank:WP_000341046.1;Name=WP_000341046.1;Ontology_term=GO:0016020,GO:0016600;gbkey=CDS;gene=yqiK;go_component=membrane|0016020||IEA,flotillin complex|0016600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417523.1;locus_tag=AB25_RS08535;product=flotillin family protein;protein_id=WP_000341046.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 325903 325962 . + . ID=gene-AB25_RS31305;Name=AB25_RS31305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31305 NZ_JJMC01000055.1 Protein Homology CDS 325903 325962 . + 0 ID=cds-WP_100249846.1;Parent=gene-AB25_RS31305;Dbxref=GenBank:WP_100249846.1;Name=WP_100249846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791256.1;locus_tag=AB25_RS31305;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_100249846.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 326279 326338 . + . ID=gene-AB25_RS31315;Name=ibsE;gbkey=Gene;gene=ibsE;gene_biotype=protein_coding;locus_tag=AB25_RS31315 NZ_JJMC01000055.1 Protein Homology CDS 326279 326338 . + 0 ID=cds-WP_001387082.1;Parent=gene-AB25_RS31315;Dbxref=GenBank:WP_001387082.1;Name=WP_001387082.1;gbkey=CDS;gene=ibsE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791257.1;locus_tag=AB25_RS31315;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_001387082.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 326458 327891 . - . ID=gene-AB25_RS08530;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=AB25_RS08530;old_locus_tag=AB25_3514 NZ_JJMC01000055.1 Protein Homology CDS 326458 327891 . - 0 ID=cds-WP_000869178.1;Parent=gene-AB25_RS08530;Dbxref=GenBank:WP_000869178.1;Name=WP_000869178.1;Ontology_term=GO:0005975,GO:0009058,GO:0016779;gbkey=CDS;gene=hldE;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417524.1;locus_tag=AB25_RS08530;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=WP_000869178.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 327939 330779 . - . ID=gene-AB25_RS08525;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=AB25_RS08525;old_locus_tag=AB25_3515 NZ_JJMC01000055.1 Protein Homology CDS 327939 330779 . - 0 ID=cds-WP_032171233.1;Parent=gene-AB25_RS08525;Dbxref=GenBank:WP_032171233.1;Name=WP_032171233.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417525.1;locus_tag=AB25_RS08525;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_032171233.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 330802 332103 . - . ID=gene-AB25_RS08520;Name=ygiF;gbkey=Gene;gene=ygiF;gene_biotype=protein_coding;locus_tag=AB25_RS08520;old_locus_tag=AB25_3516 NZ_JJMC01000055.1 Protein Homology CDS 330802 332103 . - 0 ID=cds-WP_000046281.1;Parent=gene-AB25_RS08520;Dbxref=GenBank:WP_000046281.1;Name=WP_000046281.1;gbkey=CDS;gene=ygiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417526.1;locus_tag=AB25_RS08520;product=inorganic triphosphatase;protein_id=WP_000046281.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 332345 332965 . + . ID=gene-AB25_RS08515;Name=ygiM;gbkey=Gene;gene=ygiM;gene_biotype=protein_coding;locus_tag=AB25_RS08515;old_locus_tag=AB25_3517 NZ_JJMC01000055.1 Protein Homology CDS 332345 332965 . + 0 ID=cds-WP_001125331.1;Parent=gene-AB25_RS08515;Dbxref=GenBank:WP_001125331.1;Name=WP_001125331.1;gbkey=CDS;gene=ygiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311965.1;locus_tag=AB25_RS08515;product=TIGR04211 family SH3 domain-containing protein;protein_id=WP_001125331.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 333029 334267 . + . ID=gene-AB25_RS08510;Name=cca;gbkey=Gene;gene=cca;gene_biotype=protein_coding;locus_tag=AB25_RS08510;old_locus_tag=AB25_3518 NZ_JJMC01000055.1 Protein Homology CDS 333029 334267 . + 0 ID=cds-WP_000708487.1;Parent=gene-AB25_RS08510;Dbxref=GenBank:WP_000708487.1;Name=WP_000708487.1;gbkey=CDS;gene=cca;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417528.1;locus_tag=AB25_RS08510;product=fused tRNA nucleotidyltransferase/2'%2C3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase Cca;protein_id=WP_000708487.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 334448 335269 . - . ID=gene-AB25_RS08505;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=AB25_RS08505;old_locus_tag=AB25_3519 NZ_JJMC01000055.1 Protein Homology CDS 334448 335269 . - 0 ID=cds-WP_001510396.1;Parent=gene-AB25_RS08505;Dbxref=GenBank:WP_001510396.1;Name=WP_001510396.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;gene=bacA;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311967.1;locus_tag=AB25_RS08505;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001510396.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 335359 335727 . - . ID=gene-AB25_RS08500;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=AB25_RS08500;old_locus_tag=AB25_3520 NZ_JJMC01000055.1 Protein Homology CDS 335359 335727 . - 0 ID=cds-WP_001295541.1;Parent=gene-AB25_RS08500;Dbxref=GenBank:WP_001295541.1;Name=WP_001295541.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708868.2;locus_tag=AB25_RS08500;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;protein_id=WP_001295541.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 335832 336449 . + . ID=gene-AB25_RS08495;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=AB25_RS08495;old_locus_tag=AB25_3521 NZ_JJMC01000055.1 Protein Homology CDS 335832 336449 . + 0 ID=cds-WP_001272796.1;Parent=gene-AB25_RS08495;Dbxref=GenBank:WP_001272796.1;Name=WP_001272796.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311969.1;locus_tag=AB25_RS08495;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_001272796.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 336462 337394 . - . ID=gene-AB25_RS08490;Name=ttdR;gbkey=Gene;gene=ttdR;gene_biotype=protein_coding;locus_tag=AB25_RS08490;old_locus_tag=AB25_3522 NZ_JJMC01000055.1 Protein Homology CDS 336462 337394 . - 0 ID=cds-WP_000935206.1;Parent=gene-AB25_RS08490;Dbxref=GenBank:WP_000935206.1;Name=WP_000935206.1;Ontology_term=GO:0045893,GO:0003700,GO:0043565;gbkey=CDS;gene=ttdR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417532.1;locus_tag=AB25_RS08490;product=L-tartrate utilization transcriptional activator TtdR;protein_id=WP_000935206.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 337601 338512 . + . ID=gene-AB25_RS08485;Name=ttdA;gbkey=Gene;gene=ttdA;gene_biotype=protein_coding;locus_tag=AB25_RS08485;old_locus_tag=AB25_3524 NZ_JJMC01000055.1 Protein Homology CDS 337601 338512 . + 0 ID=cds-WP_000986797.1;Parent=gene-AB25_RS08485;Dbxref=GenBank:WP_000986797.1;Name=WP_000986797.1;Ontology_term=GO:0008730;gbkey=CDS;gene=ttdA;go_function=L(+)-tartrate dehydratase activity|0008730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417533.1;locus_tag=AB25_RS08485;product=L(+)-tartrate dehydratase subunit alpha;protein_id=WP_000986797.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 338509 339114 . + . ID=gene-AB25_RS08480;Name=ttdB;gbkey=Gene;gene=ttdB;gene_biotype=protein_coding;locus_tag=AB25_RS08480;old_locus_tag=AB25_3525 NZ_JJMC01000055.1 Protein Homology CDS 338509 339114 . + 0 ID=cds-WP_000722957.1;Parent=gene-AB25_RS08480;Dbxref=GenBank:WP_000722957.1;Name=WP_000722957.1;Ontology_term=GO:0016836;gbkey=CDS;gene=ttdB;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417534.1;locus_tag=AB25_RS08480;product=L(+)-tartrate dehydratase subunit beta;protein_id=WP_000722957.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 339162 340625 . + . ID=gene-AB25_RS08475;Name=ttdT;gbkey=Gene;gene=ttdT;gene_biotype=protein_coding;locus_tag=AB25_RS08475;old_locus_tag=AB25_3526 NZ_JJMC01000055.1 Protein Homology CDS 339162 340625 . + 0 ID=cds-WP_000804973.1;Parent=gene-AB25_RS08475;Dbxref=GenBank:WP_000804973.1;Name=WP_000804973.1;gbkey=CDS;gene=ttdT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417535.1;locus_tag=AB25_RS08475;product=L-tartrate/succinate antiporter;protein_id=WP_000804973.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 340668 341681 . - . ID=gene-AB25_RS08470;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=AB25_RS08470;old_locus_tag=AB25_3527 NZ_JJMC01000055.1 Protein Homology CDS 340668 341681 . - 0 ID=cds-WP_032181781.1;Parent=gene-AB25_RS08470;Dbxref=GenBank:WP_032181781.1;Name=WP_032181781.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001264383.1;locus_tag=AB25_RS08470;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_032181781.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 341919 342134 . + . ID=gene-AB25_RS08465;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=AB25_RS08465;old_locus_tag=AB25_3528 NZ_JJMC01000055.1 Protein Homology CDS 341919 342134 . + 0 ID=cds-WP_001144069.1;Parent=gene-AB25_RS08465;Dbxref=GenBank:WP_001144069.1;Name=WP_001144069.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311975.1;locus_tag=AB25_RS08465;product=30S ribosomal protein S21;protein_id=WP_001144069.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 342245 343990 . + . ID=gene-AB25_RS08460;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=AB25_RS08460;old_locus_tag=AB25_3529 NZ_JJMC01000055.1 Protein Homology CDS 342245 343990 . + 0 ID=cds-WP_000918827.1;Parent=gene-AB25_RS08460;Dbxref=GenBank:WP_000918827.1;Name=WP_000918827.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311976.1;locus_tag=AB25_RS08460;product=DNA primase;protein_id=WP_000918827.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 344185 346026 . + . ID=gene-AB25_RS08455;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=AB25_RS08455;old_locus_tag=AB25_3531 NZ_JJMC01000055.1 Protein Homology CDS 344185 346026 . + 0 ID=cds-WP_000437375.1;Parent=gene-AB25_RS08455;Dbxref=GenBank:WP_000437375.1;Name=WP_000437375.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311977.1;locus_tag=AB25_RS08455;product=RNA polymerase sigma factor RpoD;protein_id=WP_000437375.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 346105 346611 . - . ID=gene-AB25_RS08450;Name=mug;gbkey=Gene;gene=mug;gene_biotype=protein_coding;locus_tag=AB25_RS08450;old_locus_tag=AB25_3532 NZ_JJMC01000055.1 Protein Homology CDS 346105 346611 . - 0 ID=cds-WP_000228937.1;Parent=gene-AB25_RS08450;Dbxref=GenBank:WP_000228937.1;Name=WP_000228937.1;Ontology_term=GO:0006285,GO:0000700;gbkey=CDS;gene=mug;go_function=mismatch base pair DNA N-glycosylase activity|0000700||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417540.1;locus_tag=AB25_RS08450;product=G/U mismatch-specific DNA glycosylase;protein_id=WP_000228937.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 346736 346811 . + . ID=gene-AB25_RS08445;Name=AB25_RS08445;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS08445;old_locus_tag=AB25_3533 NZ_JJMC01000055.1 tRNAscan-SE tRNA 346736 346811 . + . ID=rna-AB25_RS08445;Parent=gene-AB25_RS08445;anticodon=(pos:346769..346771);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS08445;product=tRNA-Ile NZ_JJMC01000055.1 tRNAscan-SE exon 346736 346811 . + . ID=exon-AB25_RS08445-1;Parent=rna-AB25_RS08445;anticodon=(pos:346769..346771);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS08445;product=tRNA-Ile NZ_JJMC01000055.1 RefSeq gene 346865 347629 . - . ID=gene-AB25_RS08440;Name=nfeF;gbkey=Gene;gene=nfeF;gene_biotype=protein_coding;gene_synonym=yqjH;locus_tag=AB25_RS08440;old_locus_tag=AB25_3534 NZ_JJMC01000055.1 Protein Homology CDS 346865 347629 . - 0 ID=cds-WP_001065905.1;Parent=gene-AB25_RS08440;Dbxref=GenBank:WP_001065905.1;Name=WP_001065905.1;gbkey=CDS;gene=nfeF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311979.1;locus_tag=AB25_RS08440;product=NADPH-dependent ferric chelate reductase NfeF;protein_id=WP_001065905.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 347917 348540 . + . ID=gene-AB25_RS08435;Name=nfeR;gbkey=Gene;gene=nfeR;gene_biotype=protein_coding;gene_synonym=yqjI;locus_tag=AB25_RS08435;old_locus_tag=AB25_3535 NZ_JJMC01000055.1 Protein Homology CDS 347917 348540 . + 0 ID=cds-WP_000018005.1;Parent=gene-AB25_RS08435;Dbxref=GenBank:WP_000018005.1;Name=WP_000018005.1;gbkey=CDS;gene=nfeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311980.1;locus_tag=AB25_RS08435;product=DNA-binding transcriptional regulator NfeR;protein_id=WP_000018005.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 348694 350214 . - . ID=gene-AB25_RS08430;Name=aer;gbkey=Gene;gene=aer;gene_biotype=protein_coding;locus_tag=AB25_RS08430;old_locus_tag=AB25_3536 NZ_JJMC01000055.1 Protein Homology CDS 348694 350214 . - 0 ID=cds-WP_000094741.1;Parent=gene-AB25_RS08430;Dbxref=GenBank:WP_000094741.1;Name=WP_000094741.1;gbkey=CDS;gene=aer;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311981.2;locus_tag=AB25_RS08430;product=aerotaxis sensor receptor Aer;protein_id=WP_000094741.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 350632 352011 . + . ID=gene-AB25_RS08425;Name=ygjG;gbkey=Gene;gene=ygjG;gene_biotype=protein_coding;locus_tag=AB25_RS08425;old_locus_tag=AB25_3538 NZ_JJMC01000055.1 Protein Homology CDS 350632 352011 . + 0 ID=cds-WP_001297164.1;Parent=gene-AB25_RS08425;Dbxref=GenBank:WP_001297164.1;Name=WP_001297164.1;Ontology_term=GO:0009447,GO:0030170,GO:0033094;gbkey=CDS;gene=ygjG;go_function=pyridoxal phosphate binding|0030170||IEA,putrescine--2-oxoglutarate transaminase activity|0033094||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417544.5;locus_tag=AB25_RS08425;product=putrescine aminotransferase;protein_id=WP_001297164.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 352053 352385 . - . ID=gene-AB25_RS08420;Name=ygjH;gbkey=Gene;gene=ygjH;gene_biotype=protein_coding;locus_tag=AB25_RS08420;old_locus_tag=AB25_3539 NZ_JJMC01000055.1 Protein Homology CDS 352053 352385 . - 0 ID=cds-WP_000450589.1;Parent=gene-AB25_RS08420;Dbxref=GenBank:WP_000450589.1;Name=WP_000450589.1;gbkey=CDS;gene=ygjH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311983.1;locus_tag=AB25_RS08420;product=tRNA-binding protein;protein_id=WP_000450589.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 352604 353587 . + . ID=gene-AB25_RS08415;Name=ebgR;gbkey=Gene;gene=ebgR;gene_biotype=protein_coding;locus_tag=AB25_RS08415;old_locus_tag=AB25_3540 NZ_JJMC01000055.1 Protein Homology CDS 352604 353587 . + 0 ID=cds-WP_000212468.1;Parent=gene-AB25_RS08415;Dbxref=GenBank:WP_000212468.1;Name=WP_000212468.1;gbkey=CDS;gene=ebgR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417546.1;locus_tag=AB25_RS08415;product=transcriptional regulator EbgR;protein_id=WP_000212468.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 353771 356863 . + . ID=gene-AB25_RS08410;Name=ebgA;gbkey=Gene;gene=ebgA;gene_biotype=protein_coding;locus_tag=AB25_RS08410;old_locus_tag=AB25_3541 NZ_JJMC01000055.1 Protein Homology CDS 353771 356863 . + 0 ID=cds-WP_032171237.1;Parent=gene-AB25_RS08410;Dbxref=GenBank:WP_032171237.1;Name=WP_032171237.1;Ontology_term=GO:0004565;gbkey=CDS;gene=ebgA;go_function=beta-galactosidase activity|0004565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311985.2;locus_tag=AB25_RS08410;product=beta-galactosidase subunit alpha;protein_id=WP_032171237.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 356860 357309 . + . ID=gene-AB25_RS08405;Name=ebgC;gbkey=Gene;gene=ebgC;gene_biotype=protein_coding;locus_tag=AB25_RS08405;old_locus_tag=AB25_3542 NZ_JJMC01000055.1 Protein Homology CDS 356860 357309 . + 0 ID=cds-WP_001219954.1;Parent=gene-AB25_RS08405;Dbxref=GenBank:WP_001219954.1;Name=WP_001219954.1;gbkey=CDS;gene=ebgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417548.1;locus_tag=AB25_RS08405;product=beta-galactosidase subunit beta;protein_id=WP_001219954.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 357372 358805 . + . ID=gene-AB25_RS08400;Name=ygjI;gbkey=Gene;gene=ygjI;gene_biotype=protein_coding;locus_tag=AB25_RS08400;old_locus_tag=AB25_3543 NZ_JJMC01000055.1 Protein Homology CDS 357372 358805 . + 0 ID=cds-WP_001388473.1;Parent=gene-AB25_RS08400;Dbxref=GenBank:WP_001388473.1;Name=WP_001388473.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ygjI;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311987.1;locus_tag=AB25_RS08400;product=amino acid permease;protein_id=WP_001388473.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 358939 360009 . + . ID=gene-AB25_RS08395;Name=ygjJ;gbkey=Gene;gene=ygjJ;gene_biotype=protein_coding;locus_tag=AB25_RS08395;old_locus_tag=AB25_3544 NZ_JJMC01000055.1 Protein Homology CDS 358939 360009 . + 0 ID=cds-WP_000767652.1;Parent=gene-AB25_RS08395;Dbxref=GenBank:WP_000767652.1;Name=WP_000767652.1;gbkey=CDS;gene=ygjJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417550.1;locus_tag=AB25_RS08395;product=protein YgjJ;protein_id=WP_000767652.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 360026 362377 . + . ID=gene-AB25_RS08390;Name=ygjK;gbkey=Gene;gene=ygjK;gene_biotype=protein_coding;locus_tag=AB25_RS08390;old_locus_tag=AB25_3545 NZ_JJMC01000055.1 Protein Homology CDS 360026 362377 . + 0 ID=cds-WP_000695453.1;Parent=gene-AB25_RS08390;Dbxref=GenBank:WP_000695453.1;Name=WP_000695453.1;Ontology_term=GO:0005991,GO:0004555;gbkey=CDS;gene=ygjK;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417551.1;locus_tag=AB25_RS08390;product=alpha-glucosidase;protein_id=WP_000695453.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 362703 364721 . + . ID=gene-AB25_RS08385;Name=fadH;gbkey=Gene;gene=fadH;gene_biotype=protein_coding;locus_tag=AB25_RS08385;old_locus_tag=AB25_3546 NZ_JJMC01000055.1 Protein Homology CDS 362703 364721 . + 0 ID=cds-WP_032171239.1;Parent=gene-AB25_RS08385;Dbxref=GenBank:WP_032171239.1;Name=WP_032171239.1;gbkey=CDS;gene=fadH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708886.1;locus_tag=AB25_RS08385;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WP_032171239.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 364766 365182 . - . ID=gene-AB25_RS08380;Name=higA;gbkey=Gene;gene=higA;gene_biotype=protein_coding;locus_tag=AB25_RS08380;old_locus_tag=AB25_3547 NZ_JJMC01000055.1 Protein Homology CDS 364766 365182 . - 0 ID=cds-WP_000560266.1;Parent=gene-AB25_RS08380;Dbxref=GenBank:WP_000560266.1;Name=WP_000560266.1;gbkey=CDS;gene=higA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417553.1;locus_tag=AB25_RS08380;product=type II toxin-antitoxin system antitoxin HigA;protein_id=WP_000560266.1;transl_table=11 NZ_JJMC01000055.1 RefSeq pseudogene 365179 365256 . - . ID=gene-AB25_RS31775;Name=AB25_RS31775;end_range=365256,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS31775;partial=true;pseudo=true NZ_JJMC01000055.1 Protein Homology CDS 365179 365256 . - 0 ID=cds-AB25_RS31775;Parent=gene-AB25_RS31775;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=365256,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311992.1;locus_tag=AB25_RS31775;partial=true;product=type II toxin-antitoxin system toxin HigB;pseudo=true;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 365453 366589 . - . ID=gene-AB25_RS08370;Name=rlmG;gbkey=Gene;gene=rlmG;gene_biotype=protein_coding;locus_tag=AB25_RS08370;old_locus_tag=AB25_3549 NZ_JJMC01000055.1 Protein Homology CDS 365453 366589 . - 0 ID=cds-WP_000018690.1;Parent=gene-AB25_RS08370;Dbxref=GenBank:WP_000018690.1;Name=WP_000018690.1;Ontology_term=GO:0031167,GO:0003676,GO:0008990;gbkey=CDS;gene=rlmG;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417555.4;locus_tag=AB25_RS08370;product=23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG;protein_id=WP_000018690.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 366674 367177 . + . ID=gene-AB25_RS08365;Name=ygjP;gbkey=Gene;gene=ygjP;gene_biotype=protein_coding;locus_tag=AB25_RS08365;old_locus_tag=AB25_3550 NZ_JJMC01000055.1 Protein Homology CDS 366674 367177 . + 0 ID=cds-WP_001295542.1;Parent=gene-AB25_RS08365;Dbxref=GenBank:WP_001295542.1;Name=WP_001295542.1;Ontology_term=GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;gene=ygjP;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311994.2;locus_tag=AB25_RS08365;product=M48 metallopeptidase family protein;protein_id=WP_001295542.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 367254 367937 . + . ID=gene-AB25_RS08360;Name=ygjQ;gbkey=Gene;gene=ygjQ;gene_biotype=protein_coding;locus_tag=AB25_RS08360;old_locus_tag=AB25_3551 NZ_JJMC01000055.1 Protein Homology CDS 367254 367937 . + 0 ID=cds-WP_001183042.1;Parent=gene-AB25_RS08360;Dbxref=GenBank:WP_001183042.1;Name=WP_001183042.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ygjQ;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001183047.1;locus_tag=AB25_RS08360;product=SanA/YdcF family protein;protein_id=WP_001183042.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 368016 369002 . + . ID=gene-AB25_RS08355;Name=ygjR;gbkey=Gene;gene=ygjR;gene_biotype=protein_coding;locus_tag=AB25_RS08355;old_locus_tag=AB25_3552 NZ_JJMC01000055.1 Protein Homology CDS 368016 369002 . + 0 ID=cds-WP_001297165.1;Parent=gene-AB25_RS08355;Dbxref=GenBank:WP_001297165.1;Name=WP_001297165.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;gene=ygjR;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417558.2;locus_tag=AB25_RS08355;product=Gfo/Idh/MocA family protein;protein_id=WP_001297165.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 369285 370250 . + . ID=gene-AB25_RS08350;Name=alx;gbkey=Gene;gene=alx;gene_biotype=protein_coding;locus_tag=AB25_RS08350;old_locus_tag=AB25_3553 NZ_JJMC01000055.1 Protein Homology CDS 369285 370250 . + 0 ID=cds-WP_001098806.1;Parent=gene-AB25_RS08350;Dbxref=GenBank:WP_001098806.1;Name=WP_001098806.1;gbkey=CDS;gene=alx;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026201.1;locus_tag=AB25_RS08350;product=TerC family membrane protein Alx;protein_id=WP_001098806.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 370649 371893 . + . ID=gene-AB25_RS08345;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=AB25_RS08345;old_locus_tag=AB25_3554 NZ_JJMC01000055.1 Protein Homology CDS 370649 371893 . + 0 ID=cds-WP_000211655.1;Parent=gene-AB25_RS08345;Dbxref=GenBank:WP_000211655.1;Name=WP_000211655.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311998.1;locus_tag=AB25_RS08345;product=serine/threonine transporter SstT;protein_id=WP_000211655.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 371898 372449 . - . ID=gene-AB25_RS08340;Name=ygjV;gbkey=Gene;gene=ygjV;gene_biotype=protein_coding;locus_tag=AB25_RS08340;old_locus_tag=AB25_3555 NZ_JJMC01000055.1 Protein Homology CDS 371898 372449 . - 0 ID=cds-WP_000128144.1;Parent=gene-AB25_RS08340;Dbxref=GenBank:WP_000128144.1;Name=WP_000128144.1;gbkey=CDS;gene=ygjV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311999.1;locus_tag=AB25_RS08340;product=YgjV family protein;protein_id=WP_000128144.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 372532 374019 . - . ID=gene-AB25_RS08335;Name=uxaA;gbkey=Gene;gene=uxaA;gene_biotype=protein_coding;locus_tag=AB25_RS08335;old_locus_tag=AB25_3556 NZ_JJMC01000055.1 Protein Homology CDS 372532 374019 . - 0 ID=cds-WP_001199376.1;Parent=gene-AB25_RS08335;Dbxref=GenBank:WP_001199376.1;Name=WP_001199376.1;gbkey=CDS;gene=uxaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199350.1;locus_tag=AB25_RS08335;product=altronate dehydratase;protein_id=WP_001199376.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 374034 375446 . - . ID=gene-AB25_RS08330;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=AB25_RS08330;old_locus_tag=AB25_3557 NZ_JJMC01000055.1 Protein Homology CDS 374034 375446 . - 0 ID=cds-WP_000187441.1;Parent=gene-AB25_RS08330;Dbxref=GenBank:WP_000187441.1;Name=WP_000187441.1;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077755.1;locus_tag=AB25_RS08330;product=glucuronate isomerase;protein_id=WP_000187441.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 375929 377227 . + . ID=gene-AB25_RS08325;Name=exuT;gbkey=Gene;gene=exuT;gene_biotype=protein_coding;locus_tag=AB25_RS08325;old_locus_tag=AB25_3558 NZ_JJMC01000055.1 Protein Homology CDS 375929 377227 . + 0 ID=cds-WP_001226463.1;Parent=gene-AB25_RS08325;Dbxref=GenBank:WP_001226463.1;Name=WP_001226463.1;gbkey=CDS;gene=exuT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708898.2;locus_tag=AB25_RS08325;product=hexuronate transporter ExuT;protein_id=WP_001226463.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 377315 378403 . - . ID=gene-AB25_RS08320;Name=AB25_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS08320;old_locus_tag=AB25_3559 NZ_JJMC01000055.1 Protein Homology CDS 377315 378403 . - 0 ID=cds-WP_001245988.1;Parent=gene-AB25_RS08320;Dbxref=GenBank:WP_001245988.1;Name=WP_001245988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001352530.1;locus_tag=AB25_RS08320;product=CfaE/CblD family pilus tip adhesin;protein_id=WP_001245988.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 378400 381084 . - . ID=gene-AB25_RS08315;Name=AB25_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS08315;old_locus_tag=AB25_3560 NZ_JJMC01000055.1 Protein Homology CDS 378400 381084 . - 0 ID=cds-WP_032173540.1;Parent=gene-AB25_RS08315;Dbxref=GenBank:WP_032173540.1;Name=WP_032173540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666746.1;locus_tag=AB25_RS08315;product=TcfC E-set like domain-containing protein;protein_id=WP_032173540.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 381176 381676 . - . ID=gene-AB25_RS08310;Name=AB25_RS08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS08310;old_locus_tag=AB25_3561 NZ_JJMC01000055.1 Protein Homology CDS 381176 381676 . - 0 ID=cds-WP_000755097.1;Parent=gene-AB25_RS08310;Dbxref=GenBank:WP_000755097.1;Name=WP_000755097.1;Ontology_term=GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000755097.1;locus_tag=AB25_RS08310;product=CS1 type fimbrial major subunit;protein_id=WP_000755097.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 381706 382422 . - . ID=gene-AB25_RS08305;Name=AB25_RS08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS08305;old_locus_tag=AB25_3562 NZ_JJMC01000055.1 Protein Homology CDS 381706 382422 . - 0 ID=cds-WP_077754694.1;Parent=gene-AB25_RS08305;Dbxref=GenBank:WP_077754694.1;Name=WP_077754694.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000225871.1;locus_tag=AB25_RS08305;product=fimbria/pilus periplasmic chaperone;protein_id=WP_077754694.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 382718 383494 . + . ID=gene-AB25_RS08300;Name=exuR;gbkey=Gene;gene=exuR;gene_biotype=protein_coding;locus_tag=AB25_RS08300;old_locus_tag=AB25_3563 NZ_JJMC01000055.1 Protein Homology CDS 382718 383494 . + 0 ID=cds-WP_000406488.1;Parent=gene-AB25_RS08300;Dbxref=GenBank:WP_000406488.1;Name=WP_000406488.1;gbkey=CDS;gene=exuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708902.1;locus_tag=AB25_RS08300;product=transcriptional regulator ExuR;protein_id=WP_000406488.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 383734 383817 . + . ID=gene-AB25_RS32295;Name=yqiM;gbkey=Gene;gene=yqiM;gene_biotype=protein_coding;locus_tag=AB25_RS32295 NZ_JJMC01000055.1 Protein Homology CDS 383734 383817 . + 0 ID=cds-WP_211180508.1;Parent=gene-AB25_RS32295;Dbxref=GenBank:WP_211180508.1;Name=WP_211180508.1;gbkey=CDS;gene=yqiM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051200.1;locus_tag=AB25_RS32295;product=protein YqiM;protein_id=WP_211180508.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 383839 384501 . + . ID=gene-AB25_RS08295;Name=yqjA;gbkey=Gene;gene=yqjA;gene_biotype=protein_coding;locus_tag=AB25_RS08295;old_locus_tag=AB25_3564 NZ_JJMC01000055.1 Protein Homology CDS 383839 384501 . + 0 ID=cds-WP_000422149.1;Parent=gene-AB25_RS08295;Dbxref=GenBank:WP_000422149.1;Name=WP_000422149.1;gbkey=CDS;gene=yqjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312004.1;locus_tag=AB25_RS08295;product=DedA family general envelope maintenance protein YqjA;protein_id=WP_000422149.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 384505 384888 . + . ID=gene-AB25_RS08290;Name=mzrA;gbkey=Gene;gene=mzrA;gene_biotype=protein_coding;locus_tag=AB25_RS08290;old_locus_tag=AB25_3565 NZ_JJMC01000055.1 Protein Homology CDS 384505 384888 . + 0 ID=cds-WP_001166768.1;Parent=gene-AB25_RS08290;Dbxref=GenBank:WP_001166768.1;Name=WP_001166768.1;gbkey=CDS;gene=mzrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417567.1;locus_tag=AB25_RS08290;product=EnvZ/OmpR regulon moderator MzrA;protein_id=WP_001166768.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 385035 385403 . + . ID=gene-AB25_RS08285;Name=yqjC;gbkey=Gene;gene=yqjC;gene_biotype=protein_coding;locus_tag=AB25_RS08285;old_locus_tag=AB25_3566 NZ_JJMC01000055.1 Protein Homology CDS 385035 385403 . + 0 ID=cds-WP_001297156.1;Parent=gene-AB25_RS08285;Dbxref=GenBank:WP_001297156.1;Name=WP_001297156.1;gbkey=CDS;gene=yqjC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417568.2;locus_tag=AB25_RS08285;product=DUF1090 family protein YqjC;protein_id=WP_001297156.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 385441 385746 . + . ID=gene-AB25_RS08280;Name=yqjD;gbkey=Gene;gene=yqjD;gene_biotype=protein_coding;locus_tag=AB25_RS08280;old_locus_tag=AB25_3567 NZ_JJMC01000055.1 Protein Homology CDS 385441 385746 . + 0 ID=cds-WP_000031415.1;Parent=gene-AB25_RS08280;Dbxref=GenBank:WP_000031415.1;Name=WP_000031415.1;Ontology_term=GO:0043022,GO:0005886;gbkey=CDS;gene=yqjD;go_component=plasma membrane|0005886||IEA;go_function=ribosome binding|0043022||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312007.1;locus_tag=AB25_RS08280;product=DUF883 family protein;protein_id=WP_000031415.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 385749 386153 . + . ID=gene-AB25_RS08275;Name=yqjE;gbkey=Gene;gene=yqjE;gene_biotype=protein_coding;locus_tag=AB25_RS08275;old_locus_tag=AB25_3568 NZ_JJMC01000055.1 Protein Homology CDS 385749 386153 . + 0 ID=cds-WP_000785722.1;Parent=gene-AB25_RS08275;Dbxref=GenBank:WP_000785722.1;Name=WP_000785722.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yqjE;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312008.1;locus_tag=AB25_RS08275;product=phage holin family protein;protein_id=WP_000785722.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 386143 386442 . + . ID=gene-AB25_RS08270;Name=yqjK;gbkey=Gene;gene=yqjK;gene_biotype=protein_coding;locus_tag=AB25_RS08270;old_locus_tag=AB25_3569 NZ_JJMC01000055.1 Protein Homology CDS 386143 386442 . + 0 ID=cds-WP_000096086.1;Parent=gene-AB25_RS08270;Dbxref=GenBank:WP_000096086.1;Name=WP_000096086.1;gbkey=CDS;gene=yqjK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312009.1;locus_tag=AB25_RS08270;product=YqjK-like family protein;protein_id=WP_000096086.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 386628 387020 . + . ID=gene-AB25_RS08265;Name=yqjF;gbkey=Gene;gene=yqjF;gene_biotype=protein_coding;locus_tag=AB25_RS08265;old_locus_tag=AB25_3570 NZ_JJMC01000055.1 Protein Homology CDS 386628 387020 . + 0 ID=cds-WP_000732240.1;Parent=gene-AB25_RS08265;Dbxref=GenBank:WP_000732240.1;Name=WP_000732240.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yqjF;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503138.1;locus_tag=AB25_RS08265;product=DoxX family protein;protein_id=WP_000732240.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 387090 388076 . + . ID=gene-AB25_RS08260;Name=yqjG;gbkey=Gene;gene=yqjG;gene_biotype=protein_coding;locus_tag=AB25_RS08260;old_locus_tag=AB25_3571 NZ_JJMC01000055.1 Protein Homology CDS 387090 388076 . + 0 ID=cds-WP_000531204.1;Parent=gene-AB25_RS08260;Dbxref=GenBank:WP_000531204.1;Name=WP_000531204.1;gbkey=CDS;gene=yqjG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708909.2;locus_tag=AB25_RS08260;product=glutathionyl-hydroquinone reductase YqjG;protein_id=WP_000531204.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 388369 388734 . + . ID=gene-AB25_RS08255;Name=yhaH;gbkey=Gene;gene=yhaH;gene_biotype=protein_coding;locus_tag=AB25_RS08255;old_locus_tag=AB25_3572 NZ_JJMC01000055.1 Protein Homology CDS 388369 388734 . + 0 ID=cds-WP_000384145.1;Parent=gene-AB25_RS08255;Dbxref=GenBank:WP_000384145.1;Name=WP_000384145.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yhaH;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312012.1;locus_tag=AB25_RS08255;product=DUF805 domain-containing protein;protein_id=WP_000384145.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 388976 389332 . + . ID=gene-AB25_RS08250;Name=AB25_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS08250;old_locus_tag=AB25_3573 NZ_JJMC01000055.1 Protein Homology CDS 388976 389332 . + 0 ID=cds-WP_001198780.1;Parent=gene-AB25_RS08250;Dbxref=GenBank:WP_001198780.1;Name=WP_001198780.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312013.1;locus_tag=AB25_RS08250;product=DUF805 domain-containing protein;protein_id=WP_001198780.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 389383 390279 . - . ID=gene-AB25_RS08245;Name=yhaJ;gbkey=Gene;gene=yhaJ;gene_biotype=protein_coding;locus_tag=AB25_RS08245;old_locus_tag=AB25_3574 NZ_JJMC01000055.1 Protein Homology CDS 389383 390279 . - 0 ID=cds-WP_001041010.1;Parent=gene-AB25_RS08245;Dbxref=GenBank:WP_001041010.1;Name=WP_001041010.1;gbkey=CDS;gene=yhaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312014.1;locus_tag=AB25_RS08245;product=DNA-binding transcriptional regulator YhaJ;protein_id=WP_001041010.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 390384 391085 . + . ID=gene-AB25_RS08240;Name=yhaK;gbkey=Gene;gene=yhaK;gene_biotype=protein_coding;locus_tag=AB25_RS08240;old_locus_tag=AB25_3575 NZ_JJMC01000055.1 Protein Homology CDS 390384 391085 . + 0 ID=cds-WP_000633577.1;Parent=gene-AB25_RS08240;Dbxref=GenBank:WP_000633577.1;Name=WP_000633577.1;gbkey=CDS;gene=yhaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417577.1;locus_tag=AB25_RS08240;product=pirin family protein;protein_id=WP_000633577.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 391108 391272 . + . ID=gene-AB25_RS08235;Name=yhaL;gbkey=Gene;gene=yhaL;gene_biotype=protein_coding;locus_tag=AB25_RS08235;old_locus_tag=AB25_3576 NZ_JJMC01000055.1 Protein Homology CDS 391108 391272 . + 0 ID=cds-WP_001295544.1;Parent=gene-AB25_RS08235;Dbxref=GenBank:WP_001295544.1;Name=WP_001295544.1;gbkey=CDS;gene=yhaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312016.2;locus_tag=AB25_RS08235;product=protein YhaL;protein_id=WP_001295544.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 391484 392794 . - . ID=gene-AB25_RS08230;Name=cyuA;gbkey=Gene;gene=cyuA;gene_biotype=protein_coding;locus_tag=AB25_RS08230;old_locus_tag=AB25_3578 NZ_JJMC01000055.1 Protein Homology CDS 391484 392794 . - 0 ID=cds-WP_000460519.1;Parent=gene-AB25_RS08230;Dbxref=GenBank:WP_000460519.1;Name=WP_000460519.1;gbkey=CDS;gene=cyuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312017.1;locus_tag=AB25_RS08230;product=cysteine desulfidase;protein_id=WP_000460519.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 392822 394153 . - . ID=gene-AB25_RS08225;Name=cyuP;gbkey=Gene;gene=cyuP;gene_biotype=protein_coding;locus_tag=AB25_RS08225;old_locus_tag=AB25_3579 NZ_JJMC01000055.1 Protein Homology CDS 392822 394153 . - 0 ID=cds-WP_000401598.1;Parent=gene-AB25_RS08225;Dbxref=GenBank:WP_000401598.1;Name=WP_000401598.1;gbkey=CDS;gene=cyuP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026203.3;locus_tag=AB25_RS08225;product=amino acid permease;protein_id=WP_000401598.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 394428 395792 . - . ID=gene-AB25_RS08220;Name=tdcG;gbkey=Gene;gene=tdcG;gene_biotype=protein_coding;locus_tag=AB25_RS08220;old_locus_tag=AB25_3580 NZ_JJMC01000055.1 Protein Homology CDS 394428 395792 . - 0 ID=cds-WP_000622115.1;Parent=gene-AB25_RS08220;Dbxref=GenBank:WP_000622115.1;Name=WP_000622115.1;gbkey=CDS;gene=tdcG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026204.1;locus_tag=AB25_RS08220;product=L-serine ammonia-lyase;protein_id=WP_000622115.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 395864 396253 . - . ID=gene-AB25_RS08215;Name=tdcF;gbkey=Gene;gene=tdcF;gene_biotype=protein_coding;locus_tag=AB25_RS08215;old_locus_tag=AB25_3581 NZ_JJMC01000055.1 Protein Homology CDS 395864 396253 . - 0 ID=cds-WP_000719990.1;Parent=gene-AB25_RS08215;Dbxref=GenBank:WP_000719990.1;Name=WP_000719990.1;gbkey=CDS;gene=tdcF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312020.2;locus_tag=AB25_RS08215;product=enamine/imine deaminase;protein_id=WP_000719990.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 396267 398561 . - . ID=gene-AB25_RS08210;Name=tdcE;gbkey=Gene;gene=tdcE;gene_biotype=protein_coding;locus_tag=AB25_RS08210;old_locus_tag=AB25_3582 NZ_JJMC01000055.1 Protein Homology CDS 396267 398561 . - 0 ID=cds-WP_000861734.1;Parent=gene-AB25_RS08210;Dbxref=GenBank:WP_000861734.1;Name=WP_000861734.1;gbkey=CDS;gene=tdcE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026205.1;locus_tag=AB25_RS08210;product=2-ketobutyrate formate-lyase/pyruvate formate-lyase;protein_id=WP_000861734.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 398595 399803 . - . ID=gene-AB25_RS08205;Name=tdcD;gbkey=Gene;gene=tdcD;gene_biotype=protein_coding;locus_tag=AB25_RS08205;old_locus_tag=AB25_3583 NZ_JJMC01000055.1 Protein Homology CDS 398595 399803 . - 0 ID=cds-WP_001297162.1;Parent=gene-AB25_RS08205;Dbxref=GenBank:WP_001297162.1;Name=WP_001297162.1;Ontology_term=GO:0006082,GO:0016310,GO:0016301;gbkey=CDS;gene=tdcD;go_function=kinase activity|0016301||IEA;go_process=organic acid metabolic process|0006082||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417585.2;locus_tag=AB25_RS08205;product=propionate kinase;protein_id=WP_001297162.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 399829 401160 . - . ID=gene-AB25_RS08200;Name=tdcC;gbkey=Gene;gene=tdcC;gene_biotype=protein_coding;locus_tag=AB25_RS08200;old_locus_tag=AB25_3584 NZ_JJMC01000055.1 Protein Homology CDS 399829 401160 . - 0 ID=cds-WP_000107720.1;Parent=gene-AB25_RS08200;Dbxref=GenBank:WP_000107720.1;Name=WP_000107720.1;gbkey=CDS;gene=tdcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312023.1;locus_tag=AB25_RS08200;product=threonine/serine transporter TdcC;protein_id=WP_000107720.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 401182 402171 . - . ID=gene-AB25_RS08195;Name=tdcB;gbkey=Gene;gene=tdcB;gene_biotype=protein_coding;locus_tag=AB25_RS08195;old_locus_tag=AB25_3585 NZ_JJMC01000055.1 Protein Homology CDS 401182 402171 . - 0 ID=cds-WP_000548347.1;Parent=gene-AB25_RS08195;Dbxref=GenBank:WP_000548347.1;Name=WP_000548347.1;Ontology_term=GO:0006567,GO:0004794,GO:0030170;gbkey=CDS;gene=tdcB;go_function=threonine deaminase activity|0004794||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312024.1;locus_tag=AB25_RS08195;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;protein_id=WP_000548347.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 402270 403208 . - . ID=gene-AB25_RS08190;Name=tdcA;gbkey=Gene;gene=tdcA;gene_biotype=protein_coding;locus_tag=AB25_RS08190;old_locus_tag=AB25_3586 NZ_JJMC01000055.1 Protein Homology CDS 402270 403208 . - 0 ID=cds-WP_000104211.1;Parent=gene-AB25_RS08190;Dbxref=GenBank:WP_000104211.1;Name=WP_000104211.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=tdcA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312025.1;locus_tag=AB25_RS08190;product=transcriptional regulator TdcA;protein_id=WP_000104211.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 403523 403741 . + . ID=gene-AB25_RS32215;Name=tdcR;gbkey=Gene;gene=tdcR;gene_biotype=protein_coding;locus_tag=AB25_RS32215 NZ_JJMC01000055.1 Protein Homology CDS 403523 403741 . + 0 ID=cds-WP_001390702.1;Parent=gene-AB25_RS32215;Dbxref=GenBank:WP_001390702.1;Name=WP_001390702.1;gbkey=CDS;gene=tdcR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417589.4;locus_tag=AB25_RS32215;product=transcriptional activator TdcR;protein_id=WP_001390702.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 403997 404536 . + . ID=gene-AB25_RS08180;Name=yhaB;gbkey=Gene;gene=yhaB;gene_biotype=protein_coding;locus_tag=AB25_RS08180;old_locus_tag=AB25_3588 NZ_JJMC01000055.1 Protein Homology CDS 403997 404536 . + 0 ID=cds-WP_032173541.1;Parent=gene-AB25_RS08180;Dbxref=GenBank:WP_032173541.1;Name=WP_032173541.1;gbkey=CDS;gene=yhaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312027.2;locus_tag=AB25_RS08180;product=protein YhaB;protein_id=WP_032173541.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 404558 405745 . + . ID=gene-AB25_RS08175;Name=AB25_RS08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS08175;old_locus_tag=AB25_3589 NZ_JJMC01000055.1 Protein Homology CDS 404558 405745 . + 0 ID=cds-WP_000484577.1;Parent=gene-AB25_RS08175;Dbxref=GenBank:WP_000484577.1;Name=WP_000484577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417591.1;locus_tag=AB25_RS08175;product=YhaC family protein;protein_id=WP_000484577.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 406472 406848 . - . ID=gene-AB25_RS27225;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=AB25_RS27225 NZ_JJMC01000055.1 cmsearch RNase_P_RNA 406472 406848 . - . ID=rna-AB25_RS27225;Parent=gene-AB25_RS27225;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS27225;product=RNase P RNA component class A NZ_JJMC01000055.1 cmsearch exon 406472 406848 . - . ID=exon-AB25_RS27225-1;Parent=rna-AB25_RS27225;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS27225;product=RNase P RNA component class A NZ_JJMC01000055.1 RefSeq gene 406881 408026 . - . ID=gene-AB25_RS08170;Name=garK;gbkey=Gene;gene=garK;gene_biotype=protein_coding;locus_tag=AB25_RS08170;old_locus_tag=AB25_3591 NZ_JJMC01000055.1 Protein Homology CDS 406881 408026 . - 0 ID=cds-WP_001299416.1;Parent=gene-AB25_RS08170;Dbxref=GenBank:WP_001299416.1;Name=WP_001299416.1;Ontology_term=GO:0031388,GO:0008887;gbkey=CDS;gene=garK;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312029.2;locus_tag=AB25_RS08170;product=glycerate 2-kinase;protein_id=WP_001299416.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 408123 409013 . - . ID=gene-AB25_RS08165;Name=garR;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=AB25_RS08165;old_locus_tag=AB25_3592 NZ_JJMC01000055.1 Protein Homology CDS 408123 409013 . - 0 ID=cds-WP_001303675.1;Parent=gene-AB25_RS08165;Dbxref=GenBank:WP_001303675.1;Name=WP_001303675.1;Ontology_term=GO:0046487,GO:0008679;gbkey=CDS;gene=garR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312030.2;locus_tag=AB25_RS08165;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_001303675.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 409043 409813 . - . ID=gene-AB25_RS08160;Name=garL;gbkey=Gene;gene=garL;gene_biotype=protein_coding;locus_tag=AB25_RS08160;old_locus_tag=AB25_3593 NZ_JJMC01000055.1 Protein Homology CDS 409043 409813 . - 0 ID=cds-WP_032171106.1;Parent=gene-AB25_RS08160;Dbxref=GenBank:WP_032171106.1;Name=WP_032171106.1;Ontology_term=GO:0019394,GO:0008672;gbkey=CDS;gene=garL;go_function=2-dehydro-3-deoxyglucarate aldolase activity|0008672||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312031.1;locus_tag=AB25_RS08160;product=2-dehydro-3-deoxyglucarate aldolase;protein_id=WP_032171106.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 409829 411163 . - . ID=gene-AB25_RS08155;Name=garP;gbkey=Gene;gene=garP;gene_biotype=protein_coding;locus_tag=AB25_RS08155;old_locus_tag=AB25_3594 NZ_JJMC01000055.1 Protein Homology CDS 409829 411163 . - 0 ID=cds-WP_000599652.1;Parent=gene-AB25_RS08155;Dbxref=GenBank:WP_000599652.1;Name=WP_000599652.1;gbkey=CDS;gene=garP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312032.1;locus_tag=AB25_RS08155;product=galactarate/glucarate/glycerate transporter GarP;protein_id=WP_000599652.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 411538 413109 . + . ID=gene-AB25_RS08150;Name=garD;gbkey=Gene;gene=garD;gene_biotype=protein_coding;locus_tag=AB25_RS08150;old_locus_tag=AB25_3597 NZ_JJMC01000055.1 Protein Homology CDS 411538 413109 . + 0 ID=cds-WP_001273761.1;Parent=gene-AB25_RS08150;Dbxref=GenBank:WP_001273761.1;Name=WP_001273761.1;Ontology_term=GO:0046392,GO:0008867;gbkey=CDS;gene=garD;go_function=galactarate dehydratase activity|0008867||IEA;go_process=galactarate catabolic process|0046392||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312033.1;locus_tag=AB25_RS08150;product=galactarate dehydratase;protein_id=WP_001273761.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 413258 413593 . + . ID=gene-AB25_RS0126025;Name=prlF;gbkey=Gene;gene=prlF;gene_biotype=protein_coding;locus_tag=AB25_RS0126025 NZ_JJMC01000055.1 Protein Homology CDS 413258 413593 . + 0 ID=cds-WP_001307405.1;Parent=gene-AB25_RS0126025;Dbxref=GenBank:WP_001307405.1;Name=WP_001307405.1;gbkey=CDS;gene=prlF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417598.1;locus_tag=AB25_RS0126025;product=type II toxin-antitoxin system antitoxin PrlF;protein_id=WP_001307405.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 413593 414057 . + . ID=gene-AB25_RS08145;Name=yhaV;gbkey=Gene;gene=yhaV;gene_biotype=protein_coding;locus_tag=AB25_RS08145;old_locus_tag=AB25_3599 NZ_JJMC01000055.1 Protein Homology CDS 413593 414057 . + 0 ID=cds-WP_000347251.1;Parent=gene-AB25_RS08145;Dbxref=GenBank:WP_000347251.1;Name=WP_000347251.1;gbkey=CDS;gene=yhaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312035.1;locus_tag=AB25_RS08145;product=type II toxin-antitoxin system ribonuclease toxin YhaV;protein_id=WP_000347251.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 414112 414921 . - . ID=gene-AB25_RS08140;Name=agaR;gbkey=Gene;gene=agaR;gene_biotype=protein_coding;locus_tag=AB25_RS08140;old_locus_tag=AB25_3600 NZ_JJMC01000055.1 Protein Homology CDS 414112 414921 . - 0 ID=cds-WP_032173542.1;Parent=gene-AB25_RS08140;Dbxref=GenBank:WP_032173542.1;Name=WP_032173542.1;gbkey=CDS;gene=agaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312036.1;locus_tag=AB25_RS08140;product=aga operon transcriptional regulator AgaR;protein_id=WP_032173542.1;transl_table=11 NZ_JJMC01000055.1 RefSeq pseudogene 415170 415244 . + . ID=gene-AB25_RS32515;Name=AB25_RS32515;end_range=415244,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32515;partial=true;pseudo=true NZ_JJMC01000055.1 Protein Homology CDS 415170 415244 . + 0 ID=cds-AB25_RS32515;Parent=gene-AB25_RS32515;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=415244,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312037.1;locus_tag=AB25_RS32515;partial=true;product=class II fructose-bisphosphate aldolase;pseudo=true;transl_table=11 NZ_JJMC01000055.1 RefSeq pseudogene 415251 415508 . + . ID=gene-AB25_RS32520;Name=AB25_RS32520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32520;old_locus_tag=AB25_3601;partial=true;pseudo=true;start_range=.,415251 NZ_JJMC01000055.1 Protein Homology CDS 415251 415508 . + 0 ID=cds-AB25_RS32520;Parent=gene-AB25_RS32520;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005975,GO:0008270,GO:0016832;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861740.1;locus_tag=AB25_RS32520;partial=true;product=class II fructose-bisphosphate aldolase;pseudo=true;start_range=.,415251;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 415622 417193 . + . ID=gene-AB25_RS08130;Name=malX;gbkey=Gene;gene=malX;gene_biotype=protein_coding;locus_tag=AB25_RS08130;old_locus_tag=AB25_3602 NZ_JJMC01000055.1 Protein Homology CDS 415622 417193 . + 0 ID=cds-WP_000192271.1;Parent=gene-AB25_RS08130;Dbxref=GenBank:WP_000192271.1;Name=WP_000192271.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=malX;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000192271.1;locus_tag=AB25_RS08130;product=maltose/glucose-specific PTS transporter subunit IIBC;protein_id=WP_000192271.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 417205 418380 . + . ID=gene-AB25_RS08125;Name=AB25_RS08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS08125;old_locus_tag=AB25_3603 NZ_JJMC01000055.1 Protein Homology CDS 417205 418380 . + 0 ID=cds-WP_000459228.1;Parent=gene-AB25_RS08125;Dbxref=GenBank:WP_000459228.1;Name=WP_000459228.1;Ontology_term=GO:0009086,GO:0030170,GO:0047804;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001695079.1;locus_tag=AB25_RS08125;product=MalY/PatB family protein;protein_id=WP_000459228.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 418394 420283 . + . ID=gene-AB25_RS08120;Name=AB25_RS08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS08120;old_locus_tag=AB25_3604 NZ_JJMC01000055.1 Protein Homology CDS 418394 420283 . + 0 ID=cds-WP_000757210.1;Parent=gene-AB25_RS08120;Dbxref=GenBank:WP_000757210.1;Name=WP_000757210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001504106.1;locus_tag=AB25_RS08120;product=enterotoxin;protein_id=WP_000757210.1;transl_table=11 NZ_JJMC01000055.1 RefSeq pseudogene 420350 420604 . - . ID=gene-AB25_RS0126030;Name=AB25_RS0126030;end_range=420604,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS0126030;old_locus_tag=AB25_3605;partial=true;pseudo=true NZ_JJMC01000055.1 Protein Homology CDS 420350 420604 . - 0 ID=cds-AB25_RS0126030;Parent=gene-AB25_RS0126030;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=420604,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462176.1;locus_tag=AB25_RS0126030;partial=true;product=16S rRNA methyltransferase;pseudo=true;transl_table=11 NZ_JJMC01000055.1 RefSeq pseudogene 420611 420697 . - . ID=gene-AB25_RS32525;Name=AB25_RS32525;end_range=420697,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32525;partial=true;pseudo=true;start_range=.,420611 NZ_JJMC01000055.1 Protein Homology CDS 420611 420697 . - 0 ID=cds-AB25_RS32525;Parent=gene-AB25_RS32525;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=420697,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839879.1;locus_tag=AB25_RS32525;partial=true;product=hypothetical protein;pseudo=true;start_range=.,420611;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 420763 422199 . - . ID=gene-AB25_RS08115;Name=AB25_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS08115;old_locus_tag=AB25_3606 NZ_JJMC01000055.1 Protein Homology CDS 420763 422199 . - 0 ID=cds-WP_000622487.1;Parent=gene-AB25_RS08115;Dbxref=GenBank:WP_000622487.1;Name=WP_000622487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622485.1;locus_tag=AB25_RS08115;product=hypothetical protein;protein_id=WP_000622487.1;transl_table=11 NZ_JJMC01000055.1 RefSeq pseudogene 422196 423527 . - . ID=gene-AB25_RS08110;Name=AB25_RS08110;end_range=423527,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS08110;old_locus_tag=AB25_3607;partial=true;pseudo=true NZ_JJMC01000055.1 Protein Homology CDS 422196 423527 . - 0 ID=cds-AB25_RS08110;Parent=gene-AB25_RS08110;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;end_range=423527,.;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001695747.1;locus_tag=AB25_RS08110;partial=true;product=DEAD/DEAH box helicase;pseudo=true;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 423582 423857 . + . ID=gene-AB25_RS32745;Name=AB25_RS32745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32745 NZ_JJMC01000055.1 Protein Homology CDS 423582 423857 . + 0 ID=cds-WP_000179213.1;Parent=gene-AB25_RS32745;Dbxref=GenBank:WP_000179213.1;Name=WP_000179213.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024169.6;locus_tag=AB25_RS32745;product=IS1-like element transposase;protein_id=WP_000179213.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 423879 424268 . + . ID=gene-AB25_RS32750;Name=AB25_RS32750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32750;old_locus_tag=AB25_3609 NZ_JJMC01000055.1 Protein Homology CDS 423879 424268 . + 0 ID=cds-WP_071999143.1;Parent=gene-AB25_RS32750;Dbxref=GenBank:WP_071999143.1;Name=WP_071999143.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033558.1;locus_tag=AB25_RS32750;product=IS1 family transposase;protein_id=WP_071999143.1;transl_table=11 NZ_JJMC01000055.1 RefSeq pseudogene 424277 425551 . - . ID=gene-AB25_RS08100;Name=tnpC;gbkey=Gene;gene=tnpC;gene_biotype=pseudogene;locus_tag=AB25_RS08100;old_locus_tag=AB25_3610;partial=true;pseudo=true;start_range=.,424277 NZ_JJMC01000055.1 Protein Homology CDS 424277 425551 . - 0 ID=cds-AB25_RS08100;Parent=gene-AB25_RS08100;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpC;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904571.1;locus_tag=AB25_RS08100;partial=true;product=IS66 family transposase;pseudo=true;start_range=.,424277;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 425571 425918 . - . ID=gene-AB25_RS08095;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AB25_RS08095;old_locus_tag=AB25_3611 NZ_JJMC01000055.1 Protein Homology CDS 425571 425918 . - 0 ID=cds-WP_000624622.1;Parent=gene-AB25_RS08095;Dbxref=GenBank:WP_000624622.1;Name=WP_000624622.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858152.1;locus_tag=AB25_RS08095;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000624622.1;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 425918 426595 . - . ID=gene-AB25_RS0126040;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AB25_RS0126040 NZ_JJMC01000055.1 Protein Homology CDS 425918 426595 . - 0 ID=cds-WP_001339397.1;Parent=gene-AB25_RS0126040;Dbxref=GenBank:WP_001339397.1;Name=WP_001339397.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;gene=tnpA;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743492.1;locus_tag=AB25_RS0126040;product=IS66-like element accessory protein TnpA;protein_id=WP_001339397.1;transl_table=11 NZ_JJMC01000055.1 RefSeq pseudogene 426651 427771 . - . ID=gene-AB25_RS08090;Name=AB25_RS08090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS08090;old_locus_tag=AB25_3613;partial=true;pseudo=true;start_range=.,426651 NZ_JJMC01000055.1 Protein Homology CDS 426651 427771 . - 0 ID=cds-AB25_RS08090;Parent=gene-AB25_RS08090;Note=programmed frameshift%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612175.1;locus_tag=AB25_RS08090;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,426651;transl_table=11 NZ_JJMC01000055.1 RefSeq gene 428368 432459 . + . ID=gene-AB25_RS08080;Name=espI;gbkey=Gene;gene=espI;gene_biotype=protein_coding;locus_tag=AB25_RS08080;old_locus_tag=AB25_3616 NZ_JJMC01000055.1 Protein Homology CDS 428368 432459 . + 0 ID=cds-WP_032173422.1;Parent=gene-AB25_RS08080;Dbxref=GenBank:WP_032173422.1;Name=WP_032173422.1;gbkey=CDS;gene=espI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_062895919.1;locus_tag=AB25_RS08080;product=serine protease autotransporter EspI;protein_id=WP_032173422.1;transl_table=11 NZ_JJMC01000055.1 RefSeq pseudogene 432580 432723 . - . ID=gene-AB25_RS28840;Name=AB25_RS28840;end_range=432723,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS28840;partial=true;pseudo=true NZ_JJMC01000055.1 Protein Homology CDS 432580 432723 . - 0 ID=cds-AB25_RS28840;Parent=gene-AB25_RS28840;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=432723,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611998.1;locus_tag=AB25_RS28840;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_JJMC01000055.1 RefSeq pseudogene 432776 433156 . - . ID=gene-AB25_RS30560;Name=AB25_RS30560;end_range=433156,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS30560;old_locus_tag=AB25_3617;partial=true;pseudo=true NZ_JJMC01000055.1 Protein Homology CDS 432776 433156 . - 0 ID=cds-AB25_RS30560;Parent=gene-AB25_RS30560;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=433156,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099160.1;locus_tag=AB25_RS30560;partial=true;product=IS66 family transposase;pseudo=true;transl_table=11 NZ_JJMC01000055.1 RefSeq pseudogene 433162 433416 . - . ID=gene-AB25_RS0126050;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=pseudogene;locus_tag=AB25_RS0126050;old_locus_tag=AB25_3618;partial=true;pseudo=true;start_range=.,433162 NZ_JJMC01000055.1 Protein Homology CDS 433162 433416 . - 0 ID=cds-AB25_RS0126050;Parent=gene-AB25_RS0126050;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536669.1;locus_tag=AB25_RS0126050;partial=true;product=IS66 family insertion sequence element accessory protein TnpB;pseudo=true;start_range=.,433162;transl_table=11 ##sequence-region NZ_JJMC01000056.1 1 10342 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000056.1 RefSeq region 1 10342 . + . ID=NZ_JJMC01000056.1:1..10342;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000056.1 RefSeq gene 62 1084 . + . ID=gene-AB25_RS08070;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=AB25_RS08070;old_locus_tag=AB25_3619 NZ_JJMC01000056.1 Protein Homology CDS 62 1084 . + 0 ID=cds-WP_032215751.1-4;Parent=gene-AB25_RS08070;Dbxref=GenBank:WP_032215751.1;Name=WP_032215751.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=AB25_RS08070;product=IS21-like element IS100 family transposase;protein_id=WP_032215751.1;transl_table=11 NZ_JJMC01000056.1 RefSeq gene 1081 1863 . + . ID=gene-AB25_RS08065;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=AB25_RS08065;old_locus_tag=AB25_3620 NZ_JJMC01000056.1 Protein Homology CDS 1081 1863 . + 0 ID=cds-WP_001317493.1;Parent=gene-AB25_RS08065;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=AB25_RS08065;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_JJMC01000056.1 RefSeq gene 2514 3527 . - . ID=gene-AB25_RS08060;Name=AB25_RS08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS08060;old_locus_tag=AB25_3623 NZ_JJMC01000056.1 Protein Homology CDS 2514 3527 . - 0 ID=cds-WP_032296113.1;Parent=gene-AB25_RS08060;Dbxref=GenBank:WP_032296113.1;Name=WP_032296113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245959.1;locus_tag=AB25_RS08060;product=aldose 1-epimerase family protein;protein_id=WP_032296113.1;transl_table=11 NZ_JJMC01000056.1 RefSeq gene 3539 4855 . - . ID=gene-AB25_RS08055;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=AB25_RS08055;old_locus_tag=AB25_3624 NZ_JJMC01000056.1 Protein Homology CDS 3539 4855 . - 0 ID=cds-WP_000998343.1;Parent=gene-AB25_RS08055;Dbxref=GenBank:WP_000998343.1;Name=WP_000998343.1;Ontology_term=GO:0015756,GO:0015150,GO:0015535;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA,fucose:proton symporter activity|0015535||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462691.1;locus_tag=AB25_RS08055;product=L-fucose:H+ symporter permease;protein_id=WP_000998343.1;transl_table=11 NZ_JJMC01000056.1 RefSeq gene 4883 5803 . - . ID=gene-AB25_RS08050;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=AB25_RS08050;old_locus_tag=AB25_3625 NZ_JJMC01000056.1 Protein Homology CDS 4883 5803 . - 0 ID=cds-WP_000350265.1;Parent=gene-AB25_RS08050;Dbxref=GenBank:WP_000350265.1;Name=WP_000350265.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462692.1;locus_tag=AB25_RS08050;product=ribokinase;protein_id=WP_000350265.1;transl_table=11 NZ_JJMC01000056.1 RefSeq gene 6109 6891 . + . ID=gene-AB25_RS08045;Name=AB25_RS08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS08045;old_locus_tag=AB25_3626 NZ_JJMC01000056.1 Protein Homology CDS 6109 6891 . + 0 ID=cds-WP_001411493.1;Parent=gene-AB25_RS08045;Dbxref=GenBank:WP_001411493.1;Name=WP_001411493.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462693.1;locus_tag=AB25_RS08045;product=DeoR family transcriptional regulator;protein_id=WP_001411493.1;transl_table=11 NZ_JJMC01000056.1 RefSeq pseudogene 6893 7119 . - . ID=gene-AB25_RS32035;Name=AB25_RS32035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32035;pseudo=true NZ_JJMC01000056.1 Protein Homology CDS 6893 7119 . - 0 ID=cds-AB25_RS32035;Parent=gene-AB25_RS32035;Note=with IlvB catalyzes the formation of 2-acetolactate from pyruvate%2C the small subunit is required for full activity and valine sensitivity%3B E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates%2C valine sensitivity and affinity for cofactors%3B also known as acetolactate synthase small subunit%3B frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013364090.1;locus_tag=AB25_RS32035;product=acetolactate synthase small subunit;pseudo=true;transl_table=11 NZ_JJMC01000056.1 RefSeq gene 7799 7936 . - . ID=gene-AB25_RS31785;Name=AB25_RS31785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31785;old_locus_tag=AB25_3628 NZ_JJMC01000056.1 Protein Homology CDS 7799 7936 . - 0 ID=cds-WP_001411495.1;Parent=gene-AB25_RS31785;Dbxref=GenBank:WP_001411495.1;Name=WP_001411495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001349745.1;locus_tag=AB25_RS31785;product=hypothetical protein;protein_id=WP_001411495.1;transl_table=11 NZ_JJMC01000056.1 RefSeq pseudogene 8086 9211 . + . ID=gene-AB25_RS32040;Name=AB25_RS32040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32040;partial=true;pseudo=true;start_range=.,8086 NZ_JJMC01000056.1 Protein Homology CDS 8086 9211 . + 0 ID=cds-AB25_RS32040;Parent=gene-AB25_RS32040;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312033.1;locus_tag=AB25_RS32040;partial=true;product=UxaA family hydrolase;pseudo=true;start_range=.,8086;transl_table=11 NZ_JJMC01000056.1 RefSeq gene 9316 10140 . - . ID=gene-AB25_RS08025;Name=agaR;gbkey=Gene;gene=agaR;gene_biotype=protein_coding;locus_tag=AB25_RS08025;old_locus_tag=AB25_3631 NZ_JJMC01000056.1 Protein Homology CDS 9316 10140 . - 0 ID=cds-WP_000072197.1;Parent=gene-AB25_RS08025;Dbxref=GenBank:WP_000072197.1;Name=WP_000072197.1;gbkey=CDS;gene=agaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708928.1;locus_tag=AB25_RS08025;product=aga operon transcriptional regulator AgaR;protein_id=WP_000072197.1;transl_table=11 ##sequence-region NZ_JJMC01000057.1 1 144199 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000057.1 RefSeq region 1 144199 . + . ID=NZ_JJMC01000057.1:1..144199;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000057.1 RefSeq gene 1 767 . - . ID=gene-AB25_RS08020;Name=agaR;gbkey=Gene;gene=agaR;gene_biotype=protein_coding;locus_tag=AB25_RS08020;old_locus_tag=AB25_3633;partial=true;start_range=.,1 NZ_JJMC01000057.1 Protein Homology CDS 1 767 . - 0 ID=cds-WP_032204472.1;Parent=gene-AB25_RS08020;Dbxref=GenBank:WP_032204472.1;Name=WP_032204472.1;gbkey=CDS;gene=agaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312036.1;locus_tag=AB25_RS08020;partial=true;product=aga operon transcriptional regulator AgaR;protein_id=WP_032204472.1;start_range=.,1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 1016 2296 . + . ID=gene-AB25_RS08015;Name=kbaZ;gbkey=Gene;gene=kbaZ;gene_biotype=protein_coding;locus_tag=AB25_RS08015;old_locus_tag=AB25_3634 NZ_JJMC01000057.1 Protein Homology CDS 1016 2296 . + 0 ID=cds-WP_000681903.1;Parent=gene-AB25_RS08015;Dbxref=GenBank:WP_000681903.1;Name=WP_000681903.1;gbkey=CDS;gene=kbaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417601.1;locus_tag=AB25_RS08015;product=tagatose-bisphosphate aldolase subunit KbaZ;protein_id=WP_000681903.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 2319 2792 . + . ID=gene-AB25_RS08010;Name=agaV;gbkey=Gene;gene=agaV;gene_biotype=protein_coding;locus_tag=AB25_RS08010;old_locus_tag=AB25_3635 NZ_JJMC01000057.1 Protein Homology CDS 2319 2792 . + 0 ID=cds-WP_032171281.1;Parent=gene-AB25_RS08010;Dbxref=GenBank:WP_032171281.1;Name=WP_032171281.1;gbkey=CDS;gene=agaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312038.2;locus_tag=AB25_RS08010;product=PTS N-acetylgalactosamine transporter subunit IIB;protein_id=WP_032171281.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 2803 3582 . + . ID=gene-AB25_RS08005;Name=agaW;gbkey=Gene;gene=agaW;gene_biotype=protein_coding;locus_tag=AB25_RS08005;old_locus_tag=AB25_3636 NZ_JJMC01000057.1 Protein Homology CDS 2803 3582 . + 0 ID=cds-WP_000406214.1;Parent=gene-AB25_RS08005;Dbxref=GenBank:WP_000406214.1;Name=WP_000406214.1;gbkey=CDS;gene=agaW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312039.1;locus_tag=AB25_RS08005;product=PTS N-acetylgalactosamine transporter subunit IIC;protein_id=WP_000406214.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 3572 4450 . + . ID=gene-AB25_RS08000;Name=agaE;gbkey=Gene;gene=agaE;gene_biotype=protein_coding;locus_tag=AB25_RS08000;old_locus_tag=AB25_3637 NZ_JJMC01000057.1 Protein Homology CDS 3572 4450 . + 0 ID=cds-WP_001295548.1;Parent=gene-AB25_RS08000;Dbxref=GenBank:WP_001295548.1;Name=WP_001295548.1;gbkey=CDS;gene=agaE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079236.1;locus_tag=AB25_RS08000;product=PTS N-acetylgalactosamine transporter subunit IID;protein_id=WP_001295548.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 4468 4902 . + . ID=gene-AB25_RS07995;Name=agaF;gbkey=Gene;gene=agaF;gene_biotype=protein_coding;locus_tag=AB25_RS07995;old_locus_tag=AB25_3638 NZ_JJMC01000057.1 Protein Homology CDS 4468 4902 . + 0 ID=cds-WP_000948824.1;Parent=gene-AB25_RS07995;Dbxref=GenBank:WP_000948824.1;Name=WP_000948824.1;gbkey=CDS;gene=agaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312041.1;locus_tag=AB25_RS07995;product=PTS galactosamine/N-acetylgalactosamine transporter subunit IIA;protein_id=WP_000948824.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 4899 6032 . + . ID=gene-AB25_RS07990;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=AB25_RS07990;old_locus_tag=AB25_3639 NZ_JJMC01000057.1 Protein Homology CDS 4899 6032 . + 0 ID=cds-WP_001324244.1;Parent=gene-AB25_RS07990;Dbxref=GenBank:WP_001324244.1;Name=WP_001324244.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312042.2;locus_tag=AB25_RS07990;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_001324244.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 6383 7537 . + . ID=gene-AB25_RS07985;Name=agaS;gbkey=Gene;gene=agaS;gene_biotype=protein_coding;locus_tag=AB25_RS07985;old_locus_tag=AB25_3640 NZ_JJMC01000057.1 Protein Homology CDS 6383 7537 . + 0 ID=cds-WP_001392716.1;Parent=gene-AB25_RS07985;Dbxref=GenBank:WP_001392716.1;Name=WP_001392716.1;gbkey=CDS;gene=agaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417605.1;locus_tag=AB25_RS07985;product=AgaS family sugar isomerase;protein_id=WP_001392716.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 7550 8410 . + . ID=gene-AB25_RS07980;Name=kbaY;gbkey=Gene;gene=kbaY;gene_biotype=protein_coding;locus_tag=AB25_RS07980;old_locus_tag=AB25_3641 NZ_JJMC01000057.1 Protein Homology CDS 7550 8410 . + 0 ID=cds-WP_000022766.1;Parent=gene-AB25_RS07980;Dbxref=GenBank:WP_000022766.1;Name=WP_000022766.1;gbkey=CDS;gene=kbaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312044.1;locus_tag=AB25_RS07980;product=tagatose-bisphosphate aldolase subunit KbaY;protein_id=WP_000022766.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 8577 9053 . + . ID=gene-AB25_RS07975;Name=agaB;gbkey=Gene;gene=agaB;gene_biotype=protein_coding;locus_tag=AB25_RS07975;old_locus_tag=AB25_3642 NZ_JJMC01000057.1 Protein Homology CDS 8577 9053 . + 0 ID=cds-WP_000098025.1;Parent=gene-AB25_RS07975;Dbxref=GenBank:WP_000098025.1;Name=WP_000098025.1;gbkey=CDS;gene=agaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312045.1;locus_tag=AB25_RS07975;product=PTS galactosamine transporter subunit IIB;protein_id=WP_000098025.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 9092 9895 . + . ID=gene-AB25_RS07970;Name=agaC;gbkey=Gene;gene=agaC;gene_biotype=protein_coding;locus_tag=AB25_RS07970;old_locus_tag=AB25_3643 NZ_JJMC01000057.1 Protein Homology CDS 9092 9895 . + 0 ID=cds-WP_000544489.1;Parent=gene-AB25_RS07970;Dbxref=GenBank:WP_000544489.1;Name=WP_000544489.1;gbkey=CDS;gene=agaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417608.1;locus_tag=AB25_RS07970;product=PTS galactosamine transporter subunit IIC;protein_id=WP_000544489.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 9885 10676 . + . ID=gene-AB25_RS07965;Name=agaD;gbkey=Gene;gene=agaD;gene_biotype=protein_coding;locus_tag=AB25_RS07965;old_locus_tag=AB25_3644 NZ_JJMC01000057.1 Protein Homology CDS 9885 10676 . + 0 ID=cds-WP_032171288.1;Parent=gene-AB25_RS07965;Dbxref=GenBank:WP_032171288.1;Name=WP_032171288.1;gbkey=CDS;gene=agaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708938.2;locus_tag=AB25_RS07965;product=PTS galactosamine transporter subunit IID;protein_id=WP_032171288.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 10677 11432 . + . ID=gene-AB25_RS07960;Name=agaI;gbkey=Gene;gene=agaI;gene_biotype=protein_coding;locus_tag=AB25_RS07960;old_locus_tag=AB25_3645 NZ_JJMC01000057.1 Protein Homology CDS 10677 11432 . + 0 ID=cds-WP_001323952.1;Parent=gene-AB25_RS07960;Dbxref=GenBank:WP_001323952.1;Name=WP_001323952.1;gbkey=CDS;gene=agaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417610.1;locus_tag=AB25_RS07960;product=galactosamine-6-phosphate isomerase;protein_id=WP_001323952.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 11833 12417 . + . ID=gene-AB25_RS07955;Name=yraH;gbkey=Gene;gene=yraH;gene_biotype=protein_coding;locus_tag=AB25_RS07955;old_locus_tag=AB25_3646 NZ_JJMC01000057.1 Protein Homology CDS 11833 12417 . + 0 ID=cds-WP_001045434.1;Parent=gene-AB25_RS07955;Dbxref=GenBank:WP_001045434.1;Name=WP_001045434.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=yraH;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312047.1;locus_tag=AB25_RS07955;product=fimbrial protein;protein_id=WP_001045434.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 12497 13192 . + . ID=gene-AB25_RS07950;Name=yraI;gbkey=Gene;gene=yraI;gene_biotype=protein_coding;locus_tag=AB25_RS07950;old_locus_tag=AB25_3647 NZ_JJMC01000057.1 Protein Homology CDS 12497 13192 . + 0 ID=cds-WP_000044770.1;Parent=gene-AB25_RS07950;Dbxref=GenBank:WP_000044770.1;Name=WP_000044770.1;Ontology_term=GO:0043711,GO:0061077,GO:0030288;gbkey=CDS;gene=yraI;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=pilus organization|0043711||IEA,chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417612.1;locus_tag=AB25_RS07950;product=fimbrial biogenesis chaperone;protein_id=WP_000044770.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 13222 15738 . + . ID=gene-AB25_RS07945;Name=yraJ;gbkey=Gene;gene=yraJ;gene_biotype=protein_coding;locus_tag=AB25_RS07945;old_locus_tag=AB25_3648 NZ_JJMC01000057.1 Protein Homology CDS 13222 15738 . + 0 ID=cds-WP_032171290.1;Parent=gene-AB25_RS07945;Dbxref=GenBank:WP_032171290.1;Name=WP_032171290.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;gene=yraJ;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312049.1;locus_tag=AB25_RS07945;product=fimbria/pilus outer membrane usher protein;protein_id=WP_032171290.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 15749 16840 . + . ID=gene-AB25_RS07940;Name=yraK;gbkey=Gene;gene=yraK;gene_biotype=protein_coding;locus_tag=AB25_RS07940;old_locus_tag=AB25_3649 NZ_JJMC01000057.1 Protein Homology CDS 15749 16840 . + 0 ID=cds-WP_000816988.1;Parent=gene-AB25_RS07940;Dbxref=GenBank:WP_000816988.1;Name=WP_000816988.1;gbkey=CDS;gene=yraK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417614.1;locus_tag=AB25_RS07940;product=fimbrial protein;protein_id=WP_000816988.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 16883 17743 . - . ID=gene-AB25_RS07935;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=AB25_RS07935;old_locus_tag=AB25_3650 NZ_JJMC01000057.1 Protein Homology CDS 16883 17743 . - 0 ID=cds-WP_001411378.1;Parent=gene-AB25_RS07935;Dbxref=GenBank:WP_001411378.1;Name=WP_001411378.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rsmI;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312054.1;locus_tag=AB25_RS07935;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_001411378.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 17808 19844 . + . ID=gene-AB25_RS07930;Name=lpoA;gbkey=Gene;gene=lpoA;gene_biotype=protein_coding;locus_tag=AB25_RS07930;old_locus_tag=AB25_3651 NZ_JJMC01000057.1 Protein Homology CDS 17808 19844 . + 0 ID=cds-WP_000249160.1;Parent=gene-AB25_RS07930;Dbxref=GenBank:WP_000249160.1;Name=WP_000249160.1;gbkey=CDS;gene=lpoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312055.1;locus_tag=AB25_RS07930;product=penicillin-binding protein activator LpoA;protein_id=WP_000249160.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 19802 20197 . + . ID=gene-AB25_RS07925;Name=yraN;gbkey=Gene;gene=yraN;gene_biotype=protein_coding;locus_tag=AB25_RS07925;old_locus_tag=AB25_3652 NZ_JJMC01000057.1 Protein Homology CDS 19802 20197 . + 0 ID=cds-WP_000246837.1;Parent=gene-AB25_RS07925;Dbxref=GenBank:WP_000246837.1;Name=WP_000246837.1;gbkey=CDS;gene=yraN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417617.1;locus_tag=AB25_RS07925;product=YraN family protein;protein_id=WP_000246837.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 20217 20807 . + . ID=gene-AB25_RS07920;Name=diaA;gbkey=Gene;gene=diaA;gene_biotype=protein_coding;locus_tag=AB25_RS07920;old_locus_tag=AB25_3653 NZ_JJMC01000057.1 Protein Homology CDS 20217 20807 . + 0 ID=cds-WP_001158034.1;Parent=gene-AB25_RS07920;Dbxref=GenBank:WP_001158034.1;Name=WP_001158034.1;gbkey=CDS;gene=diaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312057.1;locus_tag=AB25_RS07920;product=DnaA initiator-associating protein DiaA;protein_id=WP_001158034.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 20817 21392 . + . ID=gene-AB25_RS07915;Name=dolP;gbkey=Gene;gene=dolP;gene_biotype=protein_coding;locus_tag=AB25_RS07915;old_locus_tag=AB25_3654 NZ_JJMC01000057.1 Protein Homology CDS 20817 21392 . + 0 ID=cds-WP_000646033.1;Parent=gene-AB25_RS07915;Dbxref=GenBank:WP_000646033.1;Name=WP_000646033.1;Ontology_term=GO:0006970;gbkey=CDS;gene=dolP;go_process=response to osmotic stress|0006970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312058.1;locus_tag=AB25_RS07915;product=division/outer membrane stress-associated lipid-binding lipoprotein;protein_id=WP_000646033.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 21597 22637 . - . ID=gene-AB25_RS07910;Name=yraQ;gbkey=Gene;gene=yraQ;gene_biotype=protein_coding;locus_tag=AB25_RS07910;old_locus_tag=AB25_3655 NZ_JJMC01000057.1 Protein Homology CDS 21597 22637 . - 0 ID=cds-WP_000147576.1;Parent=gene-AB25_RS07910;Dbxref=GenBank:WP_000147576.1;Name=WP_000147576.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yraQ;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417620.1;locus_tag=AB25_RS07910;product=permease;protein_id=WP_000147576.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 22710 23345 . - . ID=gene-AB25_RS07905;Name=yraR;gbkey=Gene;gene=yraR;gene_biotype=protein_coding;locus_tag=AB25_RS07905;old_locus_tag=AB25_3656 NZ_JJMC01000057.1 Protein Homology CDS 22710 23345 . - 0 ID=cds-WP_001295551.1;Parent=gene-AB25_RS07905;Dbxref=GenBank:WP_001295551.1;Name=WP_001295551.1;gbkey=CDS;gene=yraR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417621.2;locus_tag=AB25_RS07905;product=NAD(P)H-binding protein;protein_id=WP_001295551.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 23473 23991 . + . ID=gene-AB25_RS07900;Name=yhbO;gbkey=Gene;gene=yhbO;gene_biotype=protein_coding;locus_tag=AB25_RS07900;old_locus_tag=AB25_3657 NZ_JJMC01000057.1 Protein Homology CDS 23473 23991 . + 0 ID=cds-WP_000037608.1;Parent=gene-AB25_RS07900;Dbxref=GenBank:WP_000037608.1;Name=WP_000037608.1;gbkey=CDS;gene=yhbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417622.2;locus_tag=AB25_RS07900;product=protein/nucleic acid deglycase;protein_id=WP_000037608.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 23971 24414 . - . ID=gene-AB25_RS07895;Name=yhbP;gbkey=Gene;gene=yhbP;gene_biotype=protein_coding;locus_tag=AB25_RS07895;old_locus_tag=AB25_3658 NZ_JJMC01000057.1 Protein Homology CDS 23971 24414 . - 0 ID=cds-WP_000449030.1;Parent=gene-AB25_RS07895;Dbxref=GenBank:WP_000449030.1;Name=WP_000449030.1;gbkey=CDS;gene=yhbP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417623.1;locus_tag=AB25_RS07895;product=YhbP family protein;protein_id=WP_000449030.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 24465 24767 . + . ID=gene-AB25_RS07890;Name=yhbQ;gbkey=Gene;gene=yhbQ;gene_biotype=protein_coding;locus_tag=AB25_RS07890;old_locus_tag=AB25_3659 NZ_JJMC01000057.1 Protein Homology CDS 24465 24767 . + 0 ID=cds-WP_000189314.1;Parent=gene-AB25_RS07890;Dbxref=GenBank:WP_000189314.1;Name=WP_000189314.1;gbkey=CDS;gene=yhbQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708956.2;locus_tag=AB25_RS07890;product=DNA damage response exodeoxyribonuclease YhbQ;protein_id=WP_000189314.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 24754 25257 . - . ID=gene-AB25_RS07885;Name=yhbS;gbkey=Gene;gene=yhbS;gene_biotype=protein_coding;locus_tag=AB25_RS07885;old_locus_tag=AB25_3660 NZ_JJMC01000057.1 Protein Homology CDS 24754 25257 . - 0 ID=cds-WP_000908554.1;Parent=gene-AB25_RS07885;Dbxref=GenBank:WP_000908554.1;Name=WP_000908554.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;gene=yhbS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312064.1;locus_tag=AB25_RS07885;product=GNAT family N-acetyltransferase;protein_id=WP_000908554.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 25251 25775 . - . ID=gene-AB25_RS07880;Name=ubiT;gbkey=Gene;gene=ubiT;gene_biotype=protein_coding;locus_tag=AB25_RS07880;old_locus_tag=AB25_3661 NZ_JJMC01000057.1 Protein Homology CDS 25251 25775 . - 0 ID=cds-WP_001295552.1;Parent=gene-AB25_RS07880;Dbxref=GenBank:WP_001295552.1;Name=WP_001295552.1;Ontology_term=GO:0006744,GO:0110142;gbkey=CDS;gene=ubiT;go_component=ubiquinone biosynthesis complex|0110142||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312065.1;locus_tag=AB25_RS07880;product=ubiquinone anaerobic biosynthesis accessory factor UbiT;protein_id=WP_001295552.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 25984 26979 . + . ID=gene-AB25_RS07875;Name=ubiU;gbkey=Gene;gene=ubiU;gene_biotype=protein_coding;locus_tag=AB25_RS07875;old_locus_tag=AB25_3662 NZ_JJMC01000057.1 Protein Homology CDS 25984 26979 . + 0 ID=cds-WP_000421305.1;Parent=gene-AB25_RS07875;Dbxref=GenBank:WP_000421305.1;Name=WP_000421305.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiU;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=AB25_RS07875;product=ubiquinone anaerobic biosynthesis protein UbiU;protein_id=WP_000421305.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 26988 27866 . + . ID=gene-AB25_RS07870;Name=ubiV;gbkey=Gene;gene=ubiV;gene_biotype=protein_coding;locus_tag=AB25_RS07870;old_locus_tag=AB25_3663 NZ_JJMC01000057.1 Protein Homology CDS 26988 27866 . + 0 ID=cds-WP_001301318.1;Parent=gene-AB25_RS07870;Dbxref=GenBank:WP_001301318.1;Name=WP_001301318.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiV;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417628.2;locus_tag=AB25_RS07870;product=U32 family peptidase;protein_id=WP_001301318.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 28072 29079 . + . ID=gene-AB25_RS07865;Name=yhbW;gbkey=Gene;gene=yhbW;gene_biotype=protein_coding;locus_tag=AB25_RS07865;old_locus_tag=AB25_3664 NZ_JJMC01000057.1 Protein Homology CDS 28072 29079 . + 0 ID=cds-WP_000130392.1;Parent=gene-AB25_RS07865;Dbxref=GenBank:WP_000130392.1;Name=WP_000130392.1;Ontology_term=GO:0016705;gbkey=CDS;gene=yhbW;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417629.1;locus_tag=AB25_RS07865;product=luciferase-like monooxygenase;protein_id=WP_000130392.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 29197 30441 . - . ID=gene-AB25_RS07860;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=AB25_RS07860;old_locus_tag=AB25_3665 NZ_JJMC01000057.1 Protein Homology CDS 29197 30441 . - 0 ID=cds-WP_001714379.1;Parent=gene-AB25_RS07860;Dbxref=GenBank:WP_001714379.1;Name=WP_001714379.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=mtr;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312069.1;locus_tag=AB25_RS07860;product=tryptophan permease;protein_id=WP_001714379.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 30595 32484 . - . ID=gene-AB25_RS07855;Name=deaD;gbkey=Gene;gene=deaD;gene_biotype=protein_coding;locus_tag=AB25_RS07855;old_locus_tag=AB25_3666 NZ_JJMC01000057.1 Protein Homology CDS 30595 32484 . - 0 ID=cds-WP_001295553.1;Parent=gene-AB25_RS07855;Dbxref=GenBank:WP_001295553.1;Name=WP_001295553.1;gbkey=CDS;gene=deaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417631.2;locus_tag=AB25_RS07855;product=ATP-dependent RNA helicase DeaD;protein_id=WP_001295553.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 32477 32557 . - . ID=gene-AB25_RS30580;Name=yrbN;gbkey=Gene;gene=yrbN;gene_biotype=protein_coding;locus_tag=AB25_RS30580 NZ_JJMC01000057.1 Protein Homology CDS 32477 32557 . - 0 ID=cds-WP_010723222.1;Parent=gene-AB25_RS30580;Dbxref=GenBank:WP_010723222.1;Name=WP_010723222.1;gbkey=CDS;gene=yrbN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791258.1;locus_tag=AB25_RS30580;product=protein YrbN;protein_id=WP_010723222.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 32664 33548 . - . ID=gene-AB25_RS07850;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=AB25_RS07850;old_locus_tag=AB25_3667 NZ_JJMC01000057.1 Protein Homology CDS 32664 33548 . - 0 ID=cds-WP_000802080.1;Parent=gene-AB25_RS07850;Dbxref=GenBank:WP_000802080.1;Name=WP_000802080.1;Ontology_term=GO:0005515;gbkey=CDS;gene=nlpI;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802045.1;locus_tag=AB25_RS07850;product=lipoprotein NlpI;protein_id=WP_000802080.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 33657 35792 . - . ID=gene-AB25_RS07845;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=AB25_RS07845;old_locus_tag=AB25_3668 NZ_JJMC01000057.1 Protein Homology CDS 33657 35792 . - 0 ID=cds-WP_001298740.1;Parent=gene-AB25_RS07845;Dbxref=GenBank:WP_001298740.1;Name=WP_001298740.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312072.2;locus_tag=AB25_RS07845;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_001298740.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 36039 36308 . - . ID=gene-AB25_RS07840;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=AB25_RS07840;old_locus_tag=AB25_3669 NZ_JJMC01000057.1 Protein Homology CDS 36039 36308 . - 0 ID=cds-WP_000059466.1;Parent=gene-AB25_RS07840;Dbxref=GenBank:WP_000059466.1;Name=WP_000059466.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=AB25_RS07840;product=30S ribosomal protein S15;protein_id=WP_000059466.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 36457 37401 . - . ID=gene-AB25_RS07835;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=AB25_RS07835;old_locus_tag=AB25_3670 NZ_JJMC01000057.1 Protein Homology CDS 36457 37401 . - 0 ID=cds-WP_000089698.1;Parent=gene-AB25_RS07835;Dbxref=GenBank:WP_000089698.1;Name=WP_000089698.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312074.1;locus_tag=AB25_RS07835;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_000089698.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 37401 37802 . - . ID=gene-AB25_RS07830;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=AB25_RS07830;old_locus_tag=AB25_3671 NZ_JJMC01000057.1 Protein Homology CDS 37401 37802 . - 0 ID=cds-WP_001040205.1;Parent=gene-AB25_RS07830;Dbxref=GenBank:WP_001040205.1;Name=WP_001040205.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001712908.1;locus_tag=AB25_RS07830;product=30S ribosome-binding factor RbfA;protein_id=WP_001040205.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 37966 40638 . - . ID=gene-AB25_RS07825;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=AB25_RS07825;old_locus_tag=AB25_3672 NZ_JJMC01000057.1 Protein Homology CDS 37966 40638 . - 0 ID=cds-WP_000133044.1;Parent=gene-AB25_RS07825;Dbxref=GenBank:WP_000133044.1;Name=WP_000133044.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312076.1;locus_tag=AB25_RS07825;product=translation initiation factor IF-2;protein_id=WP_000133044.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 40663 42150 . - . ID=gene-AB25_RS07820;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=AB25_RS07820;old_locus_tag=AB25_3673 NZ_JJMC01000057.1 Protein Homology CDS 40663 42150 . - 0 ID=cds-WP_001031057.1;Parent=gene-AB25_RS07820;Dbxref=GenBank:WP_001031057.1;Name=WP_001031057.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1;locus_tag=AB25_RS07820;product=transcription termination factor NusA;protein_id=WP_001031057.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 42178 42630 . - . ID=gene-AB25_RS07815;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=AB25_RS07815;old_locus_tag=AB25_3674 NZ_JJMC01000057.1 Protein Homology CDS 42178 42630 . - 0 ID=cds-WP_001300397.1;Parent=gene-AB25_RS07815;Dbxref=GenBank:WP_001300397.1;Name=WP_001300397.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1;locus_tag=AB25_RS07815;product=ribosome maturation factor RimP;protein_id=WP_001300397.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 42837 42913 . - . ID=gene-AB25_RS07810;Name=AB25_RS07810;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS07810;old_locus_tag=AB25_3675 NZ_JJMC01000057.1 tRNAscan-SE tRNA 42837 42913 . - . ID=rna-AB25_RS07810;Parent=gene-AB25_RS07810;anticodon=(pos:complement(42877..42879));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS07810;product=tRNA-Met NZ_JJMC01000057.1 tRNAscan-SE exon 42837 42913 . - . ID=exon-AB25_RS07810-1;Parent=rna-AB25_RS07810;anticodon=(pos:complement(42877..42879));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS07810;product=tRNA-Met NZ_JJMC01000057.1 RefSeq gene 43261 44604 . + . ID=gene-AB25_RS07805;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=AB25_RS07805;old_locus_tag=AB25_3676 NZ_JJMC01000057.1 Protein Homology CDS 43261 44604 . + 0 ID=cds-WP_000207683.1;Parent=gene-AB25_RS07805;Dbxref=GenBank:WP_000207683.1;Name=WP_000207683.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524,GO:0042803;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417640.1;locus_tag=AB25_RS07805;product=argininosuccinate synthase;protein_id=WP_000207683.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 44612 46237 . - . ID=gene-AB25_RS07800;Name=yhbX;gbkey=Gene;gene=yhbX;gene_biotype=protein_coding;locus_tag=AB25_RS07800;old_locus_tag=AB25_3677 NZ_JJMC01000057.1 Protein Homology CDS 44612 46237 . - 0 ID=cds-WP_001323957.1;Parent=gene-AB25_RS07800;Dbxref=GenBank:WP_001323957.1;Name=WP_001323957.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yhbX;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417641.4;locus_tag=AB25_RS07800;product=phosphoethanolamine transferase;protein_id=WP_001323957.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 46696 46782 . - . ID=gene-AB25_RS07795;Name=AB25_RS07795;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS07795;old_locus_tag=AB25_3678 NZ_JJMC01000057.1 tRNAscan-SE tRNA 46696 46782 . - . ID=rna-AB25_RS07795;Parent=gene-AB25_RS07795;anticodon=(pos:complement(46746..46748));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS07795;product=tRNA-Leu NZ_JJMC01000057.1 tRNAscan-SE exon 46696 46782 . - . ID=exon-AB25_RS07795-1;Parent=rna-AB25_RS07795;anticodon=(pos:complement(46746..46748));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS07795;product=tRNA-Leu NZ_JJMC01000057.1 RefSeq gene 46797 47129 . - . ID=gene-AB25_RS07790;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=AB25_RS07790;old_locus_tag=AB25_3679 NZ_JJMC01000057.1 Protein Homology CDS 46797 47129 . - 0 ID=cds-WP_001297427.1;Parent=gene-AB25_RS07790;Dbxref=GenBank:WP_001297427.1;Name=WP_001297427.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312081.1;locus_tag=AB25_RS07790;product=preprotein translocase subunit SecG;protein_id=WP_001297427.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 47357 48694 . - . ID=gene-AB25_RS07785;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=AB25_RS07785;old_locus_tag=AB25_3680 NZ_JJMC01000057.1 Protein Homology CDS 47357 48694 . - 0 ID=cds-WP_000071134.1;Parent=gene-AB25_RS07785;Dbxref=GenBank:WP_000071134.1;Name=WP_000071134.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular phosphotransferase activity|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417643.1;locus_tag=AB25_RS07785;product=phosphoglucosamine mutase;protein_id=WP_000071134.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 48687 49535 . - . ID=gene-AB25_RS07780;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=AB25_RS07780;old_locus_tag=AB25_3681 NZ_JJMC01000057.1 Protein Homology CDS 48687 49535 . - 0 ID=cds-WP_000764731.1;Parent=gene-AB25_RS07780;Dbxref=GenBank:WP_000764731.1;Name=WP_000764731.1;Ontology_term=GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312083.2;locus_tag=AB25_RS07780;product=dihydropteroate synthase;protein_id=WP_000764731.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 49625 51559 . - . ID=gene-AB25_RS07775;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=AB25_RS07775;old_locus_tag=AB25_3682 NZ_JJMC01000057.1 Protein Homology CDS 49625 51559 . - 0 ID=cds-WP_001107467.1;Parent=gene-AB25_RS07775;Dbxref=GenBank:WP_001107467.1;Name=WP_001107467.1;Ontology_term=GO:0006508,GO:0004176,GO:0004222;gbkey=CDS;gene=ftsH;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833437.1;locus_tag=AB25_RS07775;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_001107467.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 51659 52288 . - . ID=gene-AB25_RS07770;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=AB25_RS07770;old_locus_tag=AB25_3683 NZ_JJMC01000057.1 Protein Homology CDS 51659 52288 . - 0 ID=cds-WP_000145975.1;Parent=gene-AB25_RS07770;Dbxref=GenBank:WP_000145975.1;Name=WP_000145975.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312085.1;locus_tag=AB25_RS07770;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WP_000145975.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 52414 52707 . + . ID=gene-AB25_RS07765;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=AB25_RS07765;old_locus_tag=AB25_3684 NZ_JJMC01000057.1 Protein Homology CDS 52414 52707 . + 0 ID=cds-WP_001054420.1;Parent=gene-AB25_RS07765;Dbxref=GenBank:WP_001054420.1;Name=WP_001054420.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1;locus_tag=AB25_RS07765;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_001054420.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 52863 53339 . - . ID=gene-AB25_RS07760;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=AB25_RS07760;old_locus_tag=AB25_3685 NZ_JJMC01000057.1 Protein Homology CDS 52863 53339 . - 0 ID=cds-WP_001148001.1;Parent=gene-AB25_RS07760;Dbxref=GenBank:WP_001148001.1;Name=WP_001148001.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1;locus_tag=AB25_RS07760;product=transcription elongation factor GreA;protein_id=WP_001148001.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 53587 55020 . + . ID=gene-AB25_RS07755;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=AB25_RS07755;old_locus_tag=AB25_3686 NZ_JJMC01000057.1 Protein Homology CDS 53587 55020 . + 0 ID=cds-WP_001212662.1;Parent=gene-AB25_RS07755;Dbxref=GenBank:WP_001212662.1;Name=WP_001212662.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;gene=dacB;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001212660.1;locus_tag=AB25_RS07755;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_001212662.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 55206 56378 . - . ID=gene-AB25_RS07750;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=AB25_RS07750;old_locus_tag=AB25_3687 NZ_JJMC01000057.1 Protein Homology CDS 55206 56378 . - 0 ID=cds-WP_000673561.1;Parent=gene-AB25_RS07750;Dbxref=GenBank:WP_000673561.1;Name=WP_000673561.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=cgtA;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708982.1;locus_tag=AB25_RS07750;product=Obg family GTPase CgtA;protein_id=WP_000673561.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 56394 57359 . - . ID=gene-AB25_RS07745;Name=yhbE;gbkey=Gene;gene=yhbE;gene_biotype=protein_coding;locus_tag=AB25_RS07745;old_locus_tag=AB25_3688 NZ_JJMC01000057.1 Protein Homology CDS 56394 57359 . - 0 ID=cds-WP_000813037.1;Parent=gene-AB25_RS07745;Dbxref=GenBank:WP_000813037.1;Name=WP_000813037.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yhbE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135318.1;locus_tag=AB25_RS07745;product=DMT family transporter;protein_id=WP_000813037.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 57486 57743 . - . ID=gene-AB25_RS07740;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=AB25_RS07740;old_locus_tag=AB25_3689 NZ_JJMC01000057.1 Protein Homology CDS 57486 57743 . - 0 ID=cds-WP_000940595.1;Parent=gene-AB25_RS07740;Dbxref=GenBank:WP_000940595.1;Name=WP_000940595.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1;locus_tag=AB25_RS07740;product=50S ribosomal protein L27;protein_id=WP_000940595.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 57764 58075 . - . ID=gene-AB25_RS07735;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=AB25_RS07735;old_locus_tag=AB25_3690 NZ_JJMC01000057.1 Protein Homology CDS 57764 58075 . - 0 ID=cds-WP_000271401.1;Parent=gene-AB25_RS07735;Dbxref=GenBank:WP_000271401.1;Name=WP_000271401.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=AB25_RS07735;product=50S ribosomal protein L21;protein_id=WP_000271401.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 58334 59305 . + . ID=gene-AB25_RS07730;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=AB25_RS07730;old_locus_tag=AB25_3691 NZ_JJMC01000057.1 Protein Homology CDS 58334 59305 . + 0 ID=cds-WP_001047336.1;Parent=gene-AB25_RS07730;Dbxref=GenBank:WP_001047336.1;Name=WP_001047336.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispB;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417654.1;locus_tag=AB25_RS07730;product=octaprenyl diphosphate synthase;protein_id=WP_001047336.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 59532 59810 . + . ID=gene-AB25_RS07725;Name=sfsB;gbkey=Gene;gene=sfsB;gene_biotype=protein_coding;locus_tag=AB25_RS07725;old_locus_tag=AB25_3692 NZ_JJMC01000057.1 Protein Homology CDS 59532 59810 . + 0 ID=cds-WP_000445413.1;Parent=gene-AB25_RS07725;Dbxref=GenBank:WP_000445413.1;Name=WP_000445413.1;gbkey=CDS;gene=sfsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417655.1;locus_tag=AB25_RS07725;product=DNA-binding transcriptional regulator SfsB;protein_id=WP_000445413.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 59858 61117 . - . ID=gene-AB25_RS07720;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=AB25_RS07720;old_locus_tag=AB25_3693 NZ_JJMC01000057.1 Protein Homology CDS 59858 61117 . - 0 ID=cds-WP_000357259.1;Parent=gene-AB25_RS07720;Dbxref=GenBank:WP_000357259.1;Name=WP_000357259.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417656.1;locus_tag=AB25_RS07720;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_000357259.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 61172 61426 . - . ID=gene-AB25_RS07715;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=protein_coding;locus_tag=AB25_RS07715;old_locus_tag=AB25_3694 NZ_JJMC01000057.1 Protein Homology CDS 61172 61426 . - 0 ID=cds-WP_000429656.1;Parent=gene-AB25_RS07715;Dbxref=GenBank:WP_000429656.1;Name=WP_000429656.1;gbkey=CDS;gene=ibaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417657.2;locus_tag=AB25_RS07715;product=BolA family iron metabolism protein IbaG;protein_id=WP_000429656.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 61586 61879 . - . ID=gene-AB25_RS07710;Name=mlaB;gbkey=Gene;gene=mlaB;gene_biotype=protein_coding;locus_tag=AB25_RS07710;old_locus_tag=AB25_3695 NZ_JJMC01000057.1 Protein Homology CDS 61586 61879 . - 0 ID=cds-WP_000004488.1;Parent=gene-AB25_RS07710;Dbxref=GenBank:WP_000004488.1;Name=WP_000004488.1;gbkey=CDS;gene=mlaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312097.2;locus_tag=AB25_RS07710;product=lipid asymmetry maintenance protein MlaB;protein_id=WP_000004488.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 61879 62514 . - . ID=gene-AB25_RS07705;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=AB25_RS07705;old_locus_tag=AB25_3696 NZ_JJMC01000057.1 Protein Homology CDS 61879 62514 . - 0 ID=cds-WP_000476487.1;Parent=gene-AB25_RS07705;Dbxref=GenBank:WP_000476487.1;Name=WP_000476487.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417659.1;locus_tag=AB25_RS07705;product=phospholipid-binding protein MlaC;protein_id=WP_000476487.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 62533 63084 . - . ID=gene-AB25_RS07700;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=AB25_RS07700;old_locus_tag=AB25_3697 NZ_JJMC01000057.1 Protein Homology CDS 62533 63084 . - 0 ID=cds-WP_001296448.1;Parent=gene-AB25_RS07700;Dbxref=GenBank:WP_001296448.1;Name=WP_001296448.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312099.1;locus_tag=AB25_RS07700;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_001296448.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 63089 63871 . - . ID=gene-AB25_RS07695;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=AB25_RS07695;old_locus_tag=AB25_3698 NZ_JJMC01000057.1 Protein Homology CDS 63089 63871 . - 0 ID=cds-WP_000925795.1;Parent=gene-AB25_RS07695;Dbxref=GenBank:WP_000925795.1;Name=WP_000925795.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071945.1;locus_tag=AB25_RS07695;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WP_000925795.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 63879 64688 . - . ID=gene-AB25_RS07690;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;locus_tag=AB25_RS07690;old_locus_tag=AB25_3699 NZ_JJMC01000057.1 Protein Homology CDS 63879 64688 . - 0 ID=cds-WP_000438245.1;Parent=gene-AB25_RS07690;Dbxref=GenBank:WP_000438245.1;Name=WP_000438245.1;Ontology_term=GO:0005524;gbkey=CDS;gene=mlaF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312101.1;locus_tag=AB25_RS07690;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=WP_000438245.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 64898 65875 . + . ID=gene-AB25_RS07685;Name=yrbG;gbkey=Gene;gene=yrbG;gene_biotype=protein_coding;locus_tag=AB25_RS07685;old_locus_tag=AB25_3700 NZ_JJMC01000057.1 Protein Homology CDS 64898 65875 . + 0 ID=cds-WP_000922872.1;Parent=gene-AB25_RS07685;Dbxref=GenBank:WP_000922872.1;Name=WP_000922872.1;gbkey=CDS;gene=yrbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312102.1;locus_tag=AB25_RS07685;product=calcium/sodium antiporter;protein_id=WP_000922872.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 65889 66875 . + . ID=gene-AB25_RS07680;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=AB25_RS07680;old_locus_tag=AB25_3701 NZ_JJMC01000057.1 Protein Homology CDS 65889 66875 . + 0 ID=cds-WP_001295557.1;Parent=gene-AB25_RS07680;Dbxref=GenBank:WP_001295557.1;Name=WP_001295557.1;Ontology_term=GO:1901135,GO:0016853,GO:0097367;gbkey=CDS;gene=kdsD;go_function=isomerase activity|0016853||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417664.1;locus_tag=AB25_RS07680;product=arabinose-5-phosphate isomerase KdsD;protein_id=WP_001295557.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 66896 67462 . + . ID=gene-AB25_RS07675;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=AB25_RS07675;old_locus_tag=AB25_3702 NZ_JJMC01000057.1 Protein Homology CDS 66896 67462 . + 0 ID=cds-WP_000030016.1;Parent=gene-AB25_RS07675;Dbxref=GenBank:WP_000030016.1;Name=WP_000030016.1;Ontology_term=GO:0016788;gbkey=CDS;gene=kdsC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708997.1;locus_tag=AB25_RS07675;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;protein_id=WP_000030016.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 67459 68034 . + . ID=gene-AB25_RS07670;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=AB25_RS07670;old_locus_tag=AB25_3703 NZ_JJMC01000057.1 Protein Homology CDS 67459 68034 . + 0 ID=cds-WP_000030537.1;Parent=gene-AB25_RS07670;Dbxref=GenBank:WP_000030537.1;Name=WP_000030537.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312105.1;locus_tag=AB25_RS07670;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_000030537.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 68003 68560 . + . ID=gene-AB25_RS07665;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=AB25_RS07665;old_locus_tag=AB25_3704 NZ_JJMC01000057.1 Protein Homology CDS 68003 68560 . + 0 ID=cds-WP_000669785.1;Parent=gene-AB25_RS07665;Dbxref=GenBank:WP_000669785.1;Name=WP_000669785.1;gbkey=CDS;gene=lptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312106.1;locus_tag=AB25_RS07665;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;protein_id=WP_000669785.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 68567 69292 . + . ID=gene-AB25_RS07660;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=AB25_RS07660;old_locus_tag=AB25_3705 NZ_JJMC01000057.1 Protein Homology CDS 68567 69292 . + 0 ID=cds-WP_000224099.1;Parent=gene-AB25_RS07660;Dbxref=GenBank:WP_000224099.1;Name=WP_000224099.1;Ontology_term=GO:0055085,GO:0005524,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1;locus_tag=AB25_RS07660;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_000224099.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 69340 70773 . + . ID=gene-AB25_RS07655;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=AB25_RS07655;old_locus_tag=AB25_3706 NZ_JJMC01000057.1 Protein Homology CDS 69340 70773 . + 0 ID=cds-WP_000809051.1;Parent=gene-AB25_RS07655;Dbxref=GenBank:WP_000809051.1;Name=WP_000809051.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoN;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312108.1;locus_tag=AB25_RS07655;product=RNA polymerase factor sigma-54;protein_id=WP_000809051.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 70796 71083 . + . ID=gene-AB25_RS07650;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=AB25_RS07650;old_locus_tag=AB25_3707 NZ_JJMC01000057.1 Protein Homology CDS 70796 71083 . + 0 ID=cds-WP_001176599.1;Parent=gene-AB25_RS07650;Dbxref=GenBank:WP_001176599.1;Name=WP_001176599.1;Ontology_term=GO:0044238;gbkey=CDS;gene=hpf;go_process=primary metabolic process|0044238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312109.1;locus_tag=AB25_RS07650;product=ribosome hibernation promoting factor;protein_id=WP_001176599.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 71201 71692 . + . ID=gene-AB25_RS07645;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=AB25_RS07645;old_locus_tag=AB25_3708 NZ_JJMC01000057.1 Protein Homology CDS 71201 71692 . + 0 ID=cds-WP_000183676.1;Parent=gene-AB25_RS07645;Dbxref=GenBank:WP_000183676.1;Name=WP_000183676.1;gbkey=CDS;gene=ptsN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417671.1;locus_tag=AB25_RS07645;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=WP_000183676.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 71738 72592 . + . ID=gene-AB25_RS07640;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=AB25_RS07640;old_locus_tag=AB25_3709 NZ_JJMC01000057.1 Protein Homology CDS 71738 72592 . + 0 ID=cds-WP_000243741.1;Parent=gene-AB25_RS07640;Dbxref=GenBank:WP_000243741.1;Name=WP_000243741.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312111.1;locus_tag=AB25_RS07640;product=RNase adapter RapZ;protein_id=WP_000243741.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 72589 72861 . + . ID=gene-AB25_RS0126095;Name=npr;gbkey=Gene;gene=npr;gene_biotype=protein_coding;locus_tag=AB25_RS0126095;old_locus_tag=AB25_3710 NZ_JJMC01000057.1 Protein Homology CDS 72589 72861 . + 0 ID=cds-WP_000216791.1;Parent=gene-AB25_RS0126095;Dbxref=GenBank:WP_000216791.1;Name=WP_000216791.1;gbkey=CDS;gene=npr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1;locus_tag=AB25_RS0126095;product=PTS phosphocarrier protein NPr;protein_id=WP_000216791.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 73075 73707 . + . ID=gene-AB25_RS07635;Name=yrbL;gbkey=Gene;gene=yrbL;gene_biotype=protein_coding;locus_tag=AB25_RS07635;old_locus_tag=AB25_3711 NZ_JJMC01000057.1 Protein Homology CDS 73075 73707 . + 0 ID=cds-WP_000620405.1;Parent=gene-AB25_RS07635;Dbxref=GenBank:WP_000620405.1;Name=WP_000620405.1;gbkey=CDS;gene=yrbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417674.1;locus_tag=AB25_RS07635;product=PhoP regulatory network protein YrbL;protein_id=WP_000620405.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 73704 74432 . - . ID=gene-AB25_RS07630;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=AB25_RS07630;old_locus_tag=AB25_3712 NZ_JJMC01000057.1 Protein Homology CDS 73704 74432 . - 0 ID=cds-WP_000047091.1;Parent=gene-AB25_RS07630;Dbxref=GenBank:WP_000047091.1;Name=WP_000047091.1;Ontology_term=GO:0009252,GO:0016763,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_function=pentosyltransferase activity|0016763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417675.1;locus_tag=AB25_RS07630;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_000047091.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 74429 75082 . - . ID=gene-AB25_RS07625;Name=elbB;gbkey=Gene;gene=elbB;gene_biotype=protein_coding;locus_tag=AB25_RS07625;old_locus_tag=AB25_3713 NZ_JJMC01000057.1 Protein Homology CDS 74429 75082 . - 0 ID=cds-WP_001307414.1;Parent=gene-AB25_RS07625;Dbxref=GenBank:WP_001307414.1;Name=WP_001307414.1;gbkey=CDS;gene=elbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709007.2;locus_tag=AB25_RS07625;product=isoprenoid biosynthesis glyoxalase ElbB;protein_id=WP_001307414.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 75312 77648 . - . ID=gene-AB25_RS07620;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=protein_coding;locus_tag=AB25_RS07620;old_locus_tag=AB25_3714 NZ_JJMC01000057.1 Protein Homology CDS 75312 77648 . - 0 ID=cds-WP_001364218.1;Parent=gene-AB25_RS07620;Dbxref=GenBank:WP_001364218.1;Name=WP_001364218.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=arcB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709008.1;locus_tag=AB25_RS07620;product=aerobic respiration two-component sensor histidine kinase ArcB;protein_id=WP_001364218.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 77744 78673 . - . ID=gene-AB25_RS07615;Name=yhcC;gbkey=Gene;gene=yhcC;gene_biotype=protein_coding;locus_tag=AB25_RS07615;old_locus_tag=AB25_3715 NZ_JJMC01000057.1 Protein Homology CDS 77744 78673 . - 0 ID=cds-WP_001176896.1;Parent=gene-AB25_RS07615;Dbxref=GenBank:WP_001176896.1;Name=WP_001176896.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:0051536,GO:1904047;gbkey=CDS;gene=yhcC;go_function=iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312117.1;locus_tag=AB25_RS07615;product=TIGR01212 family radical SAM protein;protein_id=WP_001176896.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 79348 83808 . + . ID=gene-AB25_RS07610;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=AB25_RS07610;old_locus_tag=AB25_3717 NZ_JJMC01000057.1 Protein Homology CDS 79348 83808 . + 0 ID=cds-WP_001364217.1;Parent=gene-AB25_RS07610;Dbxref=GenBank:WP_001364217.1;Name=WP_001364217.1;Ontology_term=GO:0006537,GO:0008152,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=AB25_RS07610;product=glutamate synthase large subunit;protein_id=WP_001364217.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 83821 85239 . + . ID=gene-AB25_RS07605;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;locus_tag=AB25_RS07605;old_locus_tag=AB25_3718 NZ_JJMC01000057.1 Protein Homology CDS 83821 85239 . + 0 ID=cds-WP_000081674.1;Parent=gene-AB25_RS07605;Dbxref=GenBank:WP_000081674.1;Name=WP_000081674.1;gbkey=CDS;gene=gltD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1;locus_tag=AB25_RS07605;product=glutamate synthase subunit GltD;protein_id=WP_000081674.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 85423 86550 . + . ID=gene-AB25_RS07600;Name=yhcG;gbkey=Gene;gene=yhcG;gene_biotype=protein_coding;locus_tag=AB25_RS07600;old_locus_tag=AB25_3719 NZ_JJMC01000057.1 Protein Homology CDS 85423 86550 . + 0 ID=cds-WP_000445147.1;Parent=gene-AB25_RS07600;Dbxref=GenBank:WP_000445147.1;Name=WP_000445147.1;Ontology_term=GO:0003677,GO:0004518;gbkey=CDS;gene=yhcG;go_function=DNA binding|0003677||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312120.1;locus_tag=AB25_RS07600;product=PDDEXK nuclease domain-containing protein;protein_id=WP_000445147.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 86610 87074 . - . ID=gene-AB25_RS07595;Name=nanQ;gbkey=Gene;gene=nanQ;gene_biotype=protein_coding;locus_tag=AB25_RS07595;old_locus_tag=AB25_3720 NZ_JJMC01000057.1 Protein Homology CDS 86610 87074 . - 0 ID=cds-WP_000979882.1;Parent=gene-AB25_RS07595;Dbxref=GenBank:WP_000979882.1;Name=WP_000979882.1;Ontology_term=GO:0006974;gbkey=CDS;gene=nanQ;go_process=DNA damage response|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417688.1;locus_tag=AB25_RS07595;product=N-acetylneuraminate anomerase;protein_id=WP_000979882.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 87071 87946 . - . ID=gene-AB25_RS07590;Name=nanK;gbkey=Gene;gene=nanK;gene_biotype=protein_coding;locus_tag=AB25_RS07590;old_locus_tag=AB25_3721 NZ_JJMC01000057.1 Protein Homology CDS 87071 87946 . - 0 ID=cds-WP_000209025.1;Parent=gene-AB25_RS07590;Dbxref=GenBank:WP_000209025.1;Name=WP_000209025.1;Ontology_term=GO:0019262,GO:0005524,GO:0009384;gbkey=CDS;gene=nanK;go_function=ATP binding|0005524||IEA,N-acylmannosamine kinase activity|0009384||IEA;go_process=N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417689.4;locus_tag=AB25_RS07590;product=N-acetylmannosamine kinase;protein_id=WP_000209025.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 87943 88632 . - . ID=gene-AB25_RS07585;Name=nanE;gbkey=Gene;gene=nanE;gene_biotype=protein_coding;locus_tag=AB25_RS07585;old_locus_tag=AB25_3722 NZ_JJMC01000057.1 Protein Homology CDS 87943 88632 . - 0 ID=cds-WP_000054239.1;Parent=gene-AB25_RS07585;Dbxref=GenBank:WP_000054239.1;Name=WP_000054239.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;gene=nanE;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417690.1;locus_tag=AB25_RS07585;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_000054239.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 88680 90170 . - . ID=gene-AB25_RS07580;Name=nanT;gbkey=Gene;gene=nanT;gene_biotype=protein_coding;locus_tag=AB25_RS07580;old_locus_tag=AB25_3723 NZ_JJMC01000057.1 Protein Homology CDS 88680 90170 . - 0 ID=cds-WP_000108473.1;Parent=gene-AB25_RS07580;Dbxref=GenBank:WP_000108473.1;Name=WP_000108473.1;gbkey=CDS;gene=nanT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312124.2;locus_tag=AB25_RS07580;product=sialic acid transporter NanT;protein_id=WP_000108473.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 90279 91172 . - . ID=gene-AB25_RS07575;Name=nanA;gbkey=Gene;gene=nanA;gene_biotype=protein_coding;locus_tag=AB25_RS07575;old_locus_tag=AB25_3724 NZ_JJMC01000057.1 Protein Homology CDS 90279 91172 . - 0 ID=cds-WP_000224714.1;Parent=gene-AB25_RS07575;Dbxref=GenBank:WP_000224714.1;Name=WP_000224714.1;Ontology_term=GO:0005975,GO:0008747;gbkey=CDS;gene=nanA;go_function=N-acetylneuraminate lyase activity|0008747||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312125.1;locus_tag=AB25_RS07575;product=N-acetylneuraminate lyase;protein_id=WP_000224714.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 91294 92085 . - . ID=gene-AB25_RS07570;Name=nanR;gbkey=Gene;gene=nanR;gene_biotype=protein_coding;locus_tag=AB25_RS07570;old_locus_tag=AB25_3725 NZ_JJMC01000057.1 Protein Homology CDS 91294 92085 . - 0 ID=cds-WP_000523845.1;Parent=gene-AB25_RS07570;Dbxref=GenBank:WP_000523845.1;Name=WP_000523845.1;gbkey=CDS;gene=nanR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417693.3;locus_tag=AB25_RS07570;product=transcriptional regulator NanR;protein_id=WP_000523845.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 92465 93832 . + . ID=gene-AB25_RS07565;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=AB25_RS07565;old_locus_tag=AB25_3726 NZ_JJMC01000057.1 Protein Homology CDS 92465 93832 . + 0 ID=cds-WP_032171297.1;Parent=gene-AB25_RS07565;Dbxref=GenBank:WP_032171297.1;Name=WP_032171297.1;gbkey=CDS;gene=dcuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417694.1;locus_tag=AB25_RS07565;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WP_032171297.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 93875 94372 . - . ID=gene-AB25_RS07560;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=AB25_RS07560;old_locus_tag=AB25_3727 NZ_JJMC01000057.1 Protein Homology CDS 93875 94372 . - 0 ID=cds-WP_000366129.1;Parent=gene-AB25_RS07560;Dbxref=GenBank:WP_000366129.1;Name=WP_000366129.1;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312128.1;locus_tag=AB25_RS07560;product=ClpXP protease specificity-enhancing factor;protein_id=WP_000366129.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 94378 95016 . - . ID=gene-AB25_RS07555;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=AB25_RS07555;old_locus_tag=AB25_3728 NZ_JJMC01000057.1 Protein Homology CDS 94378 95016 . - 0 ID=cds-WP_000257293.1;Parent=gene-AB25_RS07555;Dbxref=GenBank:WP_000257293.1;Name=WP_000257293.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=sspA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312129.1;locus_tag=AB25_RS07555;product=stringent starvation protein SspA;protein_id=WP_000257293.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 95411 95803 . - . ID=gene-AB25_RS07550;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=AB25_RS07550;old_locus_tag=AB25_3729 NZ_JJMC01000057.1 Protein Homology CDS 95411 95803 . - 0 ID=cds-WP_000829818.1;Parent=gene-AB25_RS07550;Dbxref=GenBank:WP_000829818.1;Name=WP_000829818.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=AB25_RS07550;product=30S ribosomal protein S9;protein_id=WP_000829818.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 95819 96247 . - . ID=gene-AB25_RS07545;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=AB25_RS07545;old_locus_tag=AB25_3730 NZ_JJMC01000057.1 Protein Homology CDS 95819 96247 . - 0 ID=cds-WP_000847559.1;Parent=gene-AB25_RS07545;Dbxref=GenBank:WP_000847559.1;Name=WP_000847559.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=AB25_RS07545;product=50S ribosomal protein L13;protein_id=WP_000847559.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 96466 97593 . - . ID=gene-AB25_RS07540;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=AB25_RS07540;old_locus_tag=AB25_3731 NZ_JJMC01000057.1 Protein Homology CDS 96466 97593 . - 0 ID=cds-WP_001192353.1;Parent=gene-AB25_RS07540;Dbxref=GenBank:WP_001192353.1;Name=WP_001192353.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312132.1;locus_tag=AB25_RS07540;product=cell division protein ZapE;protein_id=WP_001192353.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 97787 98185 . + . ID=gene-AB25_RS07535;Name=zapG;gbkey=Gene;gene=zapG;gene_biotype=protein_coding;locus_tag=AB25_RS07535;old_locus_tag=AB25_3732 NZ_JJMC01000057.1 Protein Homology CDS 97787 98185 . + 0 ID=cds-WP_001295270.1;Parent=gene-AB25_RS07535;Dbxref=GenBank:WP_001295270.1;Name=WP_001295270.1;gbkey=CDS;gene=zapG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121352.1;locus_tag=AB25_RS07535;product=Z-ring associated protein ZapG;protein_id=WP_001295270.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 98339 99706 . + . ID=gene-AB25_RS07530;Name=degQ;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;locus_tag=AB25_RS07530;old_locus_tag=AB25_3733 NZ_JJMC01000057.1 Protein Homology CDS 98339 99706 . + 0 ID=cds-WP_001295271.1;Parent=gene-AB25_RS07530;Dbxref=GenBank:WP_001295271.1;Name=WP_001295271.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;gene=degQ;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417701.1;locus_tag=AB25_RS07530;product=serine endoprotease DegQ;protein_id=WP_001295271.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 99796 100863 . + . ID=gene-AB25_RS07525;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=AB25_RS07525;old_locus_tag=AB25_3734 NZ_JJMC01000057.1 Protein Homology CDS 99796 100863 . + 0 ID=cds-WP_000497723.1;Parent=gene-AB25_RS07525;Dbxref=GenBank:WP_000497723.1;Name=WP_000497723.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;gene=degS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312135.1;locus_tag=AB25_RS07525;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=WP_000497723.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 100925 101863 . - . ID=gene-AB25_RS07520;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=AB25_RS07520;old_locus_tag=AB25_3735 NZ_JJMC01000057.1 Protein Homology CDS 100925 101863 . - 0 ID=cds-WP_001295272.1;Parent=gene-AB25_RS07520;Dbxref=GenBank:WP_001295272.1;Name=WP_001295272.1;Ontology_term=GO:0006099,GO:0030060;gbkey=CDS;gene=mdh;go_function=L-malate dehydrogenase (NAD+) activity|0030060||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1;locus_tag=AB25_RS07520;product=malate dehydrogenase;protein_id=WP_001295272.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 102298 102768 . + . ID=gene-AB25_RS07515;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=AB25_RS07515;old_locus_tag=AB25_3736 NZ_JJMC01000057.1 Protein Homology CDS 102298 102768 . + 0 ID=cds-WP_001257846.1;Parent=gene-AB25_RS07515;Dbxref=GenBank:WP_001257846.1;Name=WP_001257846.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257852.1;locus_tag=AB25_RS07515;product=transcriptional regulator ArgR;protein_id=WP_001257846.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 103133 103396 . + . ID=gene-AB25_RS07510;Name=yhcN;gbkey=Gene;gene=yhcN;gene_biotype=protein_coding;locus_tag=AB25_RS07510;old_locus_tag=AB25_3737 NZ_JJMC01000057.1 Protein Homology CDS 103133 103396 . + 0 ID=cds-WP_000695688.1;Parent=gene-AB25_RS07510;Dbxref=GenBank:WP_000695688.1;Name=WP_000695688.1;gbkey=CDS;gene=yhcN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417705.2;locus_tag=AB25_RS07510;product=peroxide/acid stress response protein YhcN;protein_id=WP_000695688.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 103452 103724 . - . ID=gene-AB25_RS07505;Name=yhcO;gbkey=Gene;gene=yhcO;gene_biotype=protein_coding;locus_tag=AB25_RS07505;old_locus_tag=AB25_3738 NZ_JJMC01000057.1 Protein Homology CDS 103452 103724 . - 0 ID=cds-WP_001029005.1;Parent=gene-AB25_RS07505;Dbxref=GenBank:WP_001029005.1;Name=WP_001029005.1;gbkey=CDS;gene=yhcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312139.1;locus_tag=AB25_RS07505;product=barstar family protein;protein_id=WP_001029005.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 103816 105783 . - . ID=gene-AB25_RS07500;Name=aaeB;gbkey=Gene;gene=aaeB;gene_biotype=protein_coding;locus_tag=AB25_RS07500;old_locus_tag=AB25_3739 NZ_JJMC01000057.1 Protein Homology CDS 103816 105783 . - 0 ID=cds-WP_000510962.1;Parent=gene-AB25_RS07500;Dbxref=GenBank:WP_000510962.1;Name=WP_000510962.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709037.1;locus_tag=AB25_RS07500;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WP_000510962.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 105789 106721 . - . ID=gene-AB25_RS07495;Name=aaeA;gbkey=Gene;gene=aaeA;gene_biotype=protein_coding;locus_tag=AB25_RS07495;old_locus_tag=AB25_3740 NZ_JJMC01000057.1 Protein Homology CDS 105789 106721 . - 0 ID=cds-WP_000854021.1;Parent=gene-AB25_RS07495;Dbxref=GenBank:WP_000854021.1;Name=WP_000854021.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417708.1;locus_tag=AB25_RS07495;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WP_000854021.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 106729 106932 . - . ID=gene-AB25_RS07490;Name=aaeX;gbkey=Gene;gene=aaeX;gene_biotype=protein_coding;locus_tag=AB25_RS07490;old_locus_tag=AB25_3741 NZ_JJMC01000057.1 Protein Homology CDS 106729 106932 . - 0 ID=cds-WP_000051841.1;Parent=gene-AB25_RS07490;Dbxref=GenBank:WP_000051841.1;Name=WP_000051841.1;gbkey=CDS;gene=aaeX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051842.1;locus_tag=AB25_RS07490;product=p-hydroxybenzoic acid efflux pump operon protein AaeX;protein_id=WP_000051841.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 107115 108044 . + . ID=gene-AB25_RS07485;Name=aaeR;gbkey=Gene;gene=aaeR;gene_biotype=protein_coding;locus_tag=AB25_RS07485;old_locus_tag=AB25_3742 NZ_JJMC01000057.1 Protein Homology CDS 107115 108044 . + 0 ID=cds-WP_000440317.1;Parent=gene-AB25_RS07485;Dbxref=GenBank:WP_000440317.1;Name=WP_000440317.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=aaeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312143.1;locus_tag=AB25_RS07485;product=HTH-type transcriptional activator AaeR;protein_id=WP_000440317.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 108172 109617 . - . ID=gene-AB25_RS07480;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=AB25_RS07480;old_locus_tag=AB25_3743 NZ_JJMC01000057.1 Protein Homology CDS 108172 109617 . - 0 ID=cds-WP_000055909.1;Parent=gene-AB25_RS07480;Dbxref=GenBank:WP_000055909.1;Name=WP_000055909.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417711.1;locus_tag=AB25_RS07480;product=metalloprotease TldD;protein_id=WP_000055909.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 109773 113573 . - . ID=gene-AB25_RS07475;Name=yhdP;gbkey=Gene;gene=yhdP;gene_biotype=protein_coding;locus_tag=AB25_RS07475;old_locus_tag=AB25_3744 NZ_JJMC01000057.1 Protein Homology CDS 109773 113573 . - 0 ID=cds-WP_001253572.1;Parent=gene-AB25_RS07475;Dbxref=GenBank:WP_001253572.1;Name=WP_001253572.1;gbkey=CDS;gene=yhdP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026208.1;locus_tag=AB25_RS07475;product=AsmA2 domain-containing protein YhdP;protein_id=WP_001253572.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 113641 115110 . - . ID=gene-AB25_RS07470;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=AB25_RS07470;old_locus_tag=AB25_3745 NZ_JJMC01000057.1 Protein Homology CDS 113641 115110 . - 0 ID=cds-WP_000123197.1;Parent=gene-AB25_RS07470;Dbxref=GenBank:WP_000123197.1;Name=WP_000123197.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1;locus_tag=AB25_RS07470;product=ribonuclease G;protein_id=WP_000123197.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 115100 115693 . - . ID=gene-AB25_RS07465;Name=yhdE;gbkey=Gene;gene=yhdE;gene_biotype=protein_coding;locus_tag=AB25_RS07465;old_locus_tag=AB25_3746 NZ_JJMC01000057.1 Protein Homology CDS 115100 115693 . - 0 ID=cds-WP_000203096.1;Parent=gene-AB25_RS07465;Dbxref=GenBank:WP_000203096.1;Name=WP_000203096.1;gbkey=CDS;gene=yhdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709043.1;locus_tag=AB25_RS07465;product=nucleoside triphosphate pyrophosphatase YhdE;protein_id=WP_000203096.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 115702 116190 . - . ID=gene-AB25_RS07460;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=AB25_RS07460;old_locus_tag=AB25_3747 NZ_JJMC01000057.1 Protein Homology CDS 115702 116190 . - 0 ID=cds-WP_000179409.1;Parent=gene-AB25_RS07460;Dbxref=GenBank:WP_000179409.1;Name=WP_000179409.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001487551.1;locus_tag=AB25_RS07460;product=rod shape-determining protein MreD;protein_id=WP_000179409.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 116190 117293 . - . ID=gene-AB25_RS07455;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=AB25_RS07455;old_locus_tag=AB25_3748 NZ_JJMC01000057.1 Protein Homology CDS 116190 117293 . - 0 ID=cds-WP_000802516.1;Parent=gene-AB25_RS07455;Dbxref=GenBank:WP_000802516.1;Name=WP_000802516.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312149.1;locus_tag=AB25_RS07455;product=rod shape-determining protein MreC;protein_id=WP_000802516.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 117359 118402 . - . ID=gene-AB25_RS07450;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=AB25_RS07450;old_locus_tag=AB25_3749 NZ_JJMC01000057.1 Protein Homology CDS 117359 118402 . - 0 ID=cds-WP_000913396.1;Parent=gene-AB25_RS07450;Dbxref=GenBank:WP_000913396.1;Name=WP_000913396.1;gbkey=CDS;gene=mreB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=AB25_RS07450;product=rod shape-determining protein MreB;protein_id=WP_000913396.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 118707 120647 . - . ID=gene-AB25_RS07445;Name=csrD;gbkey=Gene;gene=csrD;gene_biotype=protein_coding;locus_tag=AB25_RS07445;old_locus_tag=AB25_3750 NZ_JJMC01000057.1 Protein Homology CDS 118707 120647 . - 0 ID=cds-WP_001241436.1;Parent=gene-AB25_RS07445;Dbxref=GenBank:WP_001241436.1;Name=WP_001241436.1;gbkey=CDS;gene=csrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417718.1;locus_tag=AB25_RS07445;product=RNase E specificity factor CsrD;protein_id=WP_001241436.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 120799 121773 . + . ID=gene-AB25_RS07440;Name=yhdH;gbkey=Gene;gene=yhdH;gene_biotype=protein_coding;locus_tag=AB25_RS07440;old_locus_tag=AB25_3751 NZ_JJMC01000057.1 Protein Homology CDS 120799 121773 . + 0 ID=cds-WP_001148461.1;Parent=gene-AB25_RS07440;Dbxref=GenBank:WP_001148461.1;Name=WP_001148461.1;Ontology_term=GO:0004022,GO:0008270,GO:0030554;gbkey=CDS;gene=yhdH;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312152.1;locus_tag=AB25_RS07440;product=MDR family oxidoreductase;protein_id=WP_001148461.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 122751 123221 . + . ID=gene-AB25_RS07430;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=AB25_RS07430;old_locus_tag=AB25_3754 NZ_JJMC01000057.1 Protein Homology CDS 122751 123221 . + 0 ID=cds-WP_000354622.1;Parent=gene-AB25_RS07430;Dbxref=GenBank:WP_000354622.1;Name=WP_000354622.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312154.1;locus_tag=AB25_RS07430;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_000354622.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 123232 124581 . + . ID=gene-AB25_RS07425;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=AB25_RS07425;old_locus_tag=AB25_3755 NZ_JJMC01000057.1 Protein Homology CDS 123232 124581 . + 0 ID=cds-WP_000884639.1;Parent=gene-AB25_RS07425;Dbxref=GenBank:WP_000884639.1;Name=WP_000884639.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009483995.1;locus_tag=AB25_RS07425;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_000884639.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 124690 124932 . + . ID=gene-AB25_RS07420;Name=yhdT;gbkey=Gene;gene=yhdT;gene_biotype=protein_coding;locus_tag=AB25_RS07420;old_locus_tag=AB25_3756 NZ_JJMC01000057.1 Protein Homology CDS 124690 124932 . + 0 ID=cds-WP_000381168.1;Parent=gene-AB25_RS07420;Dbxref=GenBank:WP_000381168.1;Name=WP_000381168.1;gbkey=CDS;gene=yhdT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312156.1;locus_tag=AB25_RS07420;product=YhdT family protein;protein_id=WP_000381168.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 124922 126373 . + . ID=gene-AB25_RS07415;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=AB25_RS07415;old_locus_tag=AB25_3757 NZ_JJMC01000057.1 Protein Homology CDS 124922 126373 . + 0 ID=cds-WP_001175731.1;Parent=gene-AB25_RS07415;Dbxref=GenBank:WP_001175731.1;Name=WP_001175731.1;Ontology_term=GO:0015887,GO:0036376,GO:0015081,GO:0015233,GO:0016020;gbkey=CDS;gene=panF;go_component=membrane|0016020||IEA;go_function=sodium ion transmembrane transporter activity|0015081||IEA,pantothenate transmembrane transporter activity|0015233||IEA;go_process=pantothenate transmembrane transport|0015887||IEA,sodium ion export across plasma membrane|0036376||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312157.2;locus_tag=AB25_RS07415;product=sodium/pantothenate symporter;protein_id=WP_001175731.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 126385 127266 . + . ID=gene-AB25_RS07410;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=AB25_RS07410;old_locus_tag=AB25_3758 NZ_JJMC01000057.1 Protein Homology CDS 126385 127266 . + 0 ID=cds-WP_001145828.1;Parent=gene-AB25_RS07410;Dbxref=GenBank:WP_001145828.1;Name=WP_001145828.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312158.1;locus_tag=AB25_RS07410;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_001145828.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 127595 128560 . + . ID=gene-AB25_RS07405;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=AB25_RS07405;old_locus_tag=AB25_3759 NZ_JJMC01000057.1 Protein Homology CDS 127595 128560 . + 0 ID=cds-WP_001219652.1;Parent=gene-AB25_RS07405;Dbxref=GenBank:WP_001219652.1;Name=WP_001219652.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785970.1;locus_tag=AB25_RS07405;product=tRNA dihydrouridine synthase DusB;protein_id=WP_001219652.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 128586 128882 . + . ID=gene-AB25_RS07400;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=AB25_RS07400;old_locus_tag=AB25_3760 NZ_JJMC01000057.1 Protein Homology CDS 128586 128882 . + 0 ID=cds-WP_000462905.1;Parent=gene-AB25_RS07400;Dbxref=GenBank:WP_000462905.1;Name=WP_000462905.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=AB25_RS07400;product=DNA-binding transcriptional regulator Fis;protein_id=WP_000462905.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 128968 129852 . + . ID=gene-AB25_RS07395;Name=yhdJ;gbkey=Gene;gene=yhdJ;gene_biotype=protein_coding;locus_tag=AB25_RS07395;old_locus_tag=AB25_3761 NZ_JJMC01000057.1 Protein Homology CDS 128968 129852 . + 0 ID=cds-WP_001258917.1;Parent=gene-AB25_RS07395;Dbxref=GenBank:WP_001258917.1;Name=WP_001258917.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;gene=yhdJ;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312161.2;locus_tag=AB25_RS07395;product=adenine-specific DNA-methyltransferase;protein_id=WP_001258917.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 129936 130115 . + . ID=gene-AB25_RS0126115;Name=yhdU;gbkey=Gene;gene=yhdU;gene_biotype=protein_coding;locus_tag=AB25_RS0126115 NZ_JJMC01000057.1 Protein Homology CDS 129936 130115 . + 0 ID=cds-WP_001295275.1;Parent=gene-AB25_RS0126115;Dbxref=GenBank:WP_001295275.1;Name=WP_001295275.1;gbkey=CDS;gene=yhdU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312162.1;locus_tag=AB25_RS0126115;product=DUF2556 family protein;protein_id=WP_001295275.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 130118 130780 . - . ID=gene-AB25_RS07390;Name=acrS;gbkey=Gene;gene=acrS;gene_biotype=protein_coding;locus_tag=AB25_RS07390;old_locus_tag=AB25_3763 NZ_JJMC01000057.1 Protein Homology CDS 130118 130780 . - 0 ID=cds-WP_001129518.1;Parent=gene-AB25_RS07390;Dbxref=GenBank:WP_001129518.1;Name=WP_001129518.1;gbkey=CDS;gene=acrS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312163.1;locus_tag=AB25_RS07390;product=multidrug efflux transporter transcriptional repressor AcrS;protein_id=WP_001129518.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 131179 132336 . + . ID=gene-AB25_RS07385;Name=acrE;gbkey=Gene;gene=acrE;gene_biotype=protein_coding;locus_tag=AB25_RS07385;old_locus_tag=AB25_3764 NZ_JJMC01000057.1 Protein Homology CDS 131179 132336 . + 0 ID=cds-WP_000160334.1;Parent=gene-AB25_RS07385;Dbxref=GenBank:WP_000160334.1;Name=WP_000160334.1;gbkey=CDS;gene=acrE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417731.1;locus_tag=AB25_RS07385;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrE;protein_id=WP_000160334.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 132348 135452 . + . ID=gene-AB25_RS07380;Name=acrF;gbkey=Gene;gene=acrF;gene_biotype=protein_coding;locus_tag=AB25_RS07380;old_locus_tag=AB25_3765 NZ_JJMC01000057.1 Protein Homology CDS 132348 135452 . + 0 ID=cds-WP_032171302.1;Parent=gene-AB25_RS07380;Dbxref=GenBank:WP_032171302.1;Name=WP_032171302.1;gbkey=CDS;gene=acrF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417732.1;locus_tag=AB25_RS07380;product=multidrug efflux RND transporter permease subunit AcrF;protein_id=WP_032171302.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 135705 135926 . + . ID=gene-AB25_RS07375;Name=AB25_RS07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS07375;old_locus_tag=AB25_3766 NZ_JJMC01000057.1 Protein Homology CDS 135705 135926 . + 0 ID=cds-WP_000825639.1;Parent=gene-AB25_RS07375;Dbxref=GenBank:WP_000825639.1;Name=WP_000825639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312167.1;locus_tag=AB25_RS07375;product=membrane protein;protein_id=WP_000825639.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 136357 137382 . + . ID=gene-AB25_RS07370;Name=AB25_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS07370;old_locus_tag=AB25_3769 NZ_JJMC01000057.1 Protein Homology CDS 136357 137382 . + 0 ID=cds-WP_000738558.1;Parent=gene-AB25_RS07370;Dbxref=GenBank:WP_000738558.1;Name=WP_000738558.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121390.1;locus_tag=AB25_RS07370;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_000738558.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 137450 138631 . + . ID=gene-AB25_RS07365;Name=yhdX;gbkey=Gene;gene=yhdX;gene_biotype=protein_coding;locus_tag=AB25_RS07365;old_locus_tag=AB25_3770 NZ_JJMC01000057.1 Protein Homology CDS 137450 138631 . + 0 ID=cds-WP_000019655.1;Parent=gene-AB25_RS07365;Dbxref=GenBank:WP_000019655.1;Name=WP_000019655.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;gene=yhdX;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026209.1;locus_tag=AB25_RS07365;product=amino acid ABC transporter permease;protein_id=WP_000019655.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 138641 139744 . + . ID=gene-AB25_RS07360;Name=yhdY;gbkey=Gene;gene=yhdY;gene_biotype=protein_coding;locus_tag=AB25_RS07360;old_locus_tag=AB25_3771 NZ_JJMC01000057.1 Protein Homology CDS 138641 139744 . + 0 ID=cds-WP_001297685.1;Parent=gene-AB25_RS07360;Dbxref=GenBank:WP_001297685.1;Name=WP_001297685.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;gene=yhdY;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709065.2;locus_tag=AB25_RS07360;product=amino acid ABC transporter permease;protein_id=WP_001297685.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 139752 140510 . + . ID=gene-AB25_RS07355;Name=yhdZ;gbkey=Gene;gene=yhdZ;gene_biotype=protein_coding;locus_tag=AB25_RS07355;old_locus_tag=AB25_3772 NZ_JJMC01000057.1 Protein Homology CDS 139752 140510 . + 0 ID=cds-WP_000078339.1;Parent=gene-AB25_RS07355;Dbxref=GenBank:WP_000078339.1;Name=WP_000078339.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=yhdZ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312171.1;locus_tag=AB25_RS07355;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_000078339.1;transl_table=11 NZ_JJMC01000057.1 RefSeq gene 140574 140689 . - . ID=gene-AB25_RS07350;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AB25_RS07350;old_locus_tag=AB25_3773 NZ_JJMC01000057.1 cmsearch rRNA 140574 140689 . - . ID=rna-AB25_RS07350;Parent=gene-AB25_RS07350;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS07350;product=5S ribosomal RNA NZ_JJMC01000057.1 cmsearch exon 140574 140689 . - . ID=exon-AB25_RS07350-1;Parent=rna-AB25_RS07350;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS07350;product=5S ribosomal RNA NZ_JJMC01000057.1 RefSeq gene 140729 140804 . - . ID=gene-AB25_RS07345;Name=AB25_RS07345;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS07345;old_locus_tag=AB25_3774 NZ_JJMC01000057.1 tRNAscan-SE tRNA 140729 140804 . - . ID=rna-AB25_RS07345;Parent=gene-AB25_RS07345;anticodon=(pos:complement(140769..140771));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS07345;product=tRNA-Thr NZ_JJMC01000057.1 tRNAscan-SE exon 140729 140804 . - . ID=exon-AB25_RS07345-1;Parent=rna-AB25_RS07345;anticodon=(pos:complement(140769..140771));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS07345;product=tRNA-Thr NZ_JJMC01000057.1 RefSeq gene 140819 140934 . - . ID=gene-AB25_RS07340;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AB25_RS07340;old_locus_tag=AB25_3775 NZ_JJMC01000057.1 cmsearch rRNA 140819 140934 . - . ID=rna-AB25_RS07340;Parent=gene-AB25_RS07340;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS07340;product=5S ribosomal RNA NZ_JJMC01000057.1 cmsearch exon 140819 140934 . - . ID=exon-AB25_RS07340-1;Parent=rna-AB25_RS07340;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS07340;product=5S ribosomal RNA NZ_JJMC01000057.1 RefSeq gene 140974 141049 . - . ID=gene-AB25_RS07335;Name=AB25_RS07335;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS07335;old_locus_tag=AB25_3776 NZ_JJMC01000057.1 tRNAscan-SE tRNA 140974 141049 . - . ID=rna-AB25_RS07335;Parent=gene-AB25_RS07335;anticodon=(pos:complement(141014..141016));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS07335;product=tRNA-Thr NZ_JJMC01000057.1 tRNAscan-SE exon 140974 141049 . - . ID=exon-AB25_RS07335-1;Parent=rna-AB25_RS07335;anticodon=(pos:complement(141014..141016));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS07335;product=tRNA-Thr NZ_JJMC01000057.1 RefSeq gene 141064 141179 . - . ID=gene-AB25_RS07330;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AB25_RS07330;old_locus_tag=AB25_3777 NZ_JJMC01000057.1 cmsearch rRNA 141064 141179 . - . ID=rna-AB25_RS07330;Parent=gene-AB25_RS07330;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS07330;product=5S ribosomal RNA NZ_JJMC01000057.1 cmsearch exon 141064 141179 . - . ID=exon-AB25_RS07330-1;Parent=rna-AB25_RS07330;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS07330;product=5S ribosomal RNA NZ_JJMC01000057.1 RefSeq gene 141274 144177 . - . ID=gene-AB25_RS0126125;Name=AB25_RS0126125;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB25_RS0126125 NZ_JJMC01000057.1 cmsearch rRNA 141274 144177 . - . ID=rna-AB25_RS0126125;Parent=gene-AB25_RS0126125;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS0126125;product=23S ribosomal RNA NZ_JJMC01000057.1 cmsearch exon 141274 144177 . - . ID=exon-AB25_RS0126125-1;Parent=rna-AB25_RS0126125;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS0126125;product=23S ribosomal RNA ##sequence-region NZ_JJMC01000058.1 1 243553 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000058.1 RefSeq region 1 243553 . + . ID=NZ_JJMC01000058.1:1..243553;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000058.1 RefSeq gene 1 985 . - . ID=gene-AB25_RS0126130;Name=AB25_RS0126130;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB25_RS0126130;partial=true;start_range=.,1 NZ_JJMC01000058.1 cmsearch rRNA 1 985 . - . ID=rna-AB25_RS0126130;Parent=gene-AB25_RS0126130;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS0126130;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JJMC01000058.1 cmsearch exon 1 985 . - . ID=exon-AB25_RS0126130-1;Parent=rna-AB25_RS0126130;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS0126130;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JJMC01000058.1 RefSeq gene 1458 2012 . + . ID=gene-AB25_RS07325;Name=yrdA;gbkey=Gene;gene=yrdA;gene_biotype=protein_coding;locus_tag=AB25_RS07325;old_locus_tag=AB25_3782 NZ_JJMC01000058.1 Protein Homology CDS 1458 2012 . + 0 ID=cds-WP_001286216.1;Parent=gene-AB25_RS07325;Dbxref=GenBank:WP_001286216.1;Name=WP_001286216.1;Ontology_term=GO:0046872;gbkey=CDS;gene=yrdA;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417738.4;locus_tag=AB25_RS07325;product=gamma carbonic anhydrase family protein;protein_id=WP_001286216.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 1988 2245 . - . ID=gene-AB25_RS0126135;Name=yrdB;gbkey=Gene;gene=yrdB;gene_biotype=protein_coding;locus_tag=AB25_RS0126135;old_locus_tag=AB25_3783 NZ_JJMC01000058.1 Protein Homology CDS 1988 2245 . - 0 ID=cds-WP_001070563.1;Parent=gene-AB25_RS0126135;Dbxref=GenBank:WP_001070563.1;Name=WP_001070563.1;gbkey=CDS;gene=yrdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417739.1;locus_tag=AB25_RS0126135;product=DUF1488 domain-containing protein;protein_id=WP_001070563.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 2242 3060 . - . ID=gene-AB25_RS07320;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=AB25_RS07320;old_locus_tag=AB25_3784 NZ_JJMC01000058.1 Protein Homology CDS 2242 3060 . - 0 ID=cds-WP_000451239.1;Parent=gene-AB25_RS07320;Dbxref=GenBank:WP_000451239.1;Name=WP_000451239.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417740.1;locus_tag=AB25_RS07320;product=shikimate dehydrogenase;protein_id=WP_000451239.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 3065 3637 . - . ID=gene-AB25_RS07315;Name=tsaC;gbkey=Gene;gene=tsaC;gene_biotype=protein_coding;locus_tag=AB25_RS07315;old_locus_tag=AB25_3785 NZ_JJMC01000058.1 Protein Homology CDS 3065 3637 . - 0 ID=cds-WP_001297709.1;Parent=gene-AB25_RS07315;Dbxref=GenBank:WP_001297709.1;Name=WP_001297709.1;Ontology_term=GO:0002949,GO:0003725,GO:0005524;gbkey=CDS;gene=tsaC;go_function=double-stranded RNA binding|0003725||IEA,ATP binding|0005524||IEA;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312175.1;locus_tag=AB25_RS07315;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=WP_001297709.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 3642 4184 . - . ID=gene-AB25_RS0126140;Name=yrdD;gbkey=Gene;gene=yrdD;gene_biotype=protein_coding;locus_tag=AB25_RS0126140 NZ_JJMC01000058.1 Protein Homology CDS 3642 4184 . - 0 ID=cds-WP_001129719.1;Parent=gene-AB25_RS0126140;Dbxref=GenBank:WP_001129719.1;Name=WP_001129719.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916,GO:0005694;gbkey=CDS;gene=yrdD;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026210.1;locus_tag=AB25_RS0126140;product=DNA topoisomerase family protein;protein_id=WP_001129719.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 4213 4686 . - . ID=gene-AB25_RS07310;Name=smg;gbkey=Gene;gene=smg;gene_biotype=protein_coding;locus_tag=AB25_RS07310;old_locus_tag=AB25_3787 NZ_JJMC01000058.1 Protein Homology CDS 4213 4686 . - 0 ID=cds-WP_000460672.1;Parent=gene-AB25_RS07310;Dbxref=GenBank:WP_000460672.1;Name=WP_000460672.1;gbkey=CDS;gene=smg;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134083.1;locus_tag=AB25_RS07310;product=DUF494 family protein Smg;protein_id=WP_000460672.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 4658 5782 . - . ID=gene-AB25_RS07305;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=AB25_RS07305;old_locus_tag=AB25_3788 NZ_JJMC01000058.1 Protein Homology CDS 4658 5782 . - 0 ID=cds-WP_000228507.1;Parent=gene-AB25_RS07305;Dbxref=GenBank:WP_000228507.1;Name=WP_000228507.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026211.1;locus_tag=AB25_RS07305;product=DNA-protecting protein DprA;protein_id=WP_000228507.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 5912 6421 . + . ID=gene-AB25_RS07300;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=AB25_RS07300;old_locus_tag=AB25_3789 NZ_JJMC01000058.1 Protein Homology CDS 5912 6421 . + 0 ID=cds-WP_000114984.1;Parent=gene-AB25_RS07300;Dbxref=GenBank:WP_000114984.1;Name=WP_000114984.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312179.1;locus_tag=AB25_RS07300;product=peptide deformylase;protein_id=WP_000114984.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 6436 7383 . + . ID=gene-AB25_RS07295;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=AB25_RS07295;old_locus_tag=AB25_3790 NZ_JJMC01000058.1 Protein Homology CDS 6436 7383 . + 0 ID=cds-WP_000004454.1;Parent=gene-AB25_RS07295;Dbxref=GenBank:WP_000004454.1;Name=WP_000004454.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312180.1;locus_tag=AB25_RS07295;product=methionyl-tRNA formyltransferase;protein_id=WP_000004454.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 7429 8718 . + . ID=gene-AB25_RS07290;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=AB25_RS07290;old_locus_tag=AB25_3791 NZ_JJMC01000058.1 Protein Homology CDS 7429 8718 . + 0 ID=cds-WP_001323790.1;Parent=gene-AB25_RS07290;Dbxref=GenBank:WP_001323790.1;Name=WP_001323790.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417747.1;locus_tag=AB25_RS07290;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_001323790.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 8740 10116 . + . ID=gene-AB25_RS07285;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=AB25_RS07285;old_locus_tag=AB25_3792 NZ_JJMC01000058.1 Protein Homology CDS 8740 10116 . + 0 ID=cds-WP_000691382.1;Parent=gene-AB25_RS07285;Dbxref=GenBank:WP_000691382.1;Name=WP_000691382.1;Ontology_term=GO:0006813,GO:0015079,GO:0016020;gbkey=CDS;gene=trkA;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=AB25_RS07285;product=Trk system potassium transporter TrkA;protein_id=WP_000691382.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 10246 10656 . + . ID=gene-AB25_RS07280;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=AB25_RS07280;old_locus_tag=AB25_3793 NZ_JJMC01000058.1 Protein Homology CDS 10246 10656 . + 0 ID=cds-WP_000022442.1;Parent=gene-AB25_RS07280;Dbxref=GenBank:WP_000022442.1;Name=WP_000022442.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312183.1;locus_tag=AB25_RS07280;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_000022442.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 10653 10871 . - . ID=gene-AB25_RS0126145;Name=arfA;gbkey=Gene;gene=arfA;gene_biotype=protein_coding;locus_tag=AB25_RS0126145 NZ_JJMC01000058.1 Protein Homology CDS 10653 10871 . - 0 ID=cds-WP_000092699.1;Parent=gene-AB25_RS0126145;Dbxref=GenBank:WP_000092699.1;Name=WP_000092699.1;gbkey=CDS;gene=arfA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588467.1;locus_tag=AB25_RS0126145;product=alternative ribosome-rescue factor ArfA;protein_id=WP_000092699.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 10927 11352 . - . ID=gene-AB25_RS07275;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=AB25_RS07275;old_locus_tag=AB25_3794 NZ_JJMC01000058.1 Protein Homology CDS 10927 11352 . - 0 ID=cds-WP_000285607.1;Parent=gene-AB25_RS07275;Dbxref=GenBank:WP_000285607.1;Name=WP_000285607.1;Ontology_term=GO:0006355,GO:0003677,GO:0008270;gbkey=CDS;gene=zntR;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312184.1;locus_tag=AB25_RS07275;product=Zn(2+)-responsive transcriptional regulator;protein_id=WP_000285607.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 11363 11731 . - . ID=gene-AB25_RS07270;Name=yhdN;gbkey=Gene;gene=yhdN;gene_biotype=protein_coding;locus_tag=AB25_RS07270;old_locus_tag=AB25_3795 NZ_JJMC01000058.1 Protein Homology CDS 11363 11731 . - 0 ID=cds-WP_000266492.1;Parent=gene-AB25_RS07270;Dbxref=GenBank:WP_000266492.1;Name=WP_000266492.1;gbkey=CDS;gene=yhdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417752.1;locus_tag=AB25_RS07270;product=DUF1992 domain-containing protein;protein_id=WP_000266492.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 11838 12221 . - . ID=gene-AB25_RS07265;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=AB25_RS07265;old_locus_tag=AB25_3796 NZ_JJMC01000058.1 Protein Homology CDS 11838 12221 . - 0 ID=cds-WP_001216368.1;Parent=gene-AB25_RS07265;Dbxref=GenBank:WP_001216368.1;Name=WP_001216368.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312186.1;locus_tag=AB25_RS07265;product=50S ribosomal protein L17;protein_id=WP_001216368.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 12262 13251 . - . ID=gene-AB25_RS07260;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=AB25_RS07260;old_locus_tag=AB25_3797 NZ_JJMC01000058.1 Protein Homology CDS 12262 13251 . - 0 ID=cds-WP_001162094.1;Parent=gene-AB25_RS07260;Dbxref=GenBank:WP_001162094.1;Name=WP_001162094.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoA;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=AB25_RS07260;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_001162094.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 13277 13897 . - . ID=gene-AB25_RS07255;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=AB25_RS07255;old_locus_tag=AB25_3798 NZ_JJMC01000058.1 Protein Homology CDS 13277 13897 . - 0 ID=cds-WP_000135224.1;Parent=gene-AB25_RS07255;Dbxref=GenBank:WP_000135224.1;Name=WP_000135224.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=AB25_RS07255;product=30S ribosomal protein S4;protein_id=WP_000135224.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 13931 14320 . - . ID=gene-AB25_RS07250;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=AB25_RS07250;old_locus_tag=AB25_3799 NZ_JJMC01000058.1 Protein Homology CDS 13931 14320 . - 0 ID=cds-WP_001029684.1;Parent=gene-AB25_RS07250;Dbxref=GenBank:WP_001029684.1;Name=WP_001029684.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=AB25_RS07250;product=30S ribosomal protein S11;protein_id=WP_001029684.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 14337 14693 . - . ID=gene-AB25_RS07245;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=AB25_RS07245;old_locus_tag=AB25_3800 NZ_JJMC01000058.1 Protein Homology CDS 14337 14693 . - 0 ID=cds-WP_000090775.1;Parent=gene-AB25_RS07245;Dbxref=GenBank:WP_000090775.1;Name=WP_000090775.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1;locus_tag=AB25_RS07245;product=30S ribosomal protein S13;protein_id=WP_000090775.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 14840 14956 . - . ID=gene-AB25_RS07240;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=AB25_RS07240;old_locus_tag=AB25_3801 NZ_JJMC01000058.1 Protein Homology CDS 14840 14956 . - 0 ID=cds-WP_000868187.1;Parent=gene-AB25_RS07240;Dbxref=GenBank:WP_000868187.1;Name=WP_000868187.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=AB25_RS07240;product=50S ribosomal protein L36;protein_id=WP_000868187.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 14988 16319 . - . ID=gene-AB25_RS07235;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=AB25_RS07235;old_locus_tag=AB25_3802 NZ_JJMC01000058.1 Protein Homology CDS 14988 16319 . - 0 ID=cds-WP_001118861.1;Parent=gene-AB25_RS07235;Dbxref=GenBank:WP_001118861.1;Name=WP_001118861.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1;locus_tag=AB25_RS07235;product=preprotein translocase subunit SecY;protein_id=WP_001118861.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 16327 16761 . - . ID=gene-AB25_RS07230;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=AB25_RS07230;old_locus_tag=AB25_3803 NZ_JJMC01000058.1 Protein Homology CDS 16327 16761 . - 0 ID=cds-WP_001238917.1;Parent=gene-AB25_RS07230;Dbxref=GenBank:WP_001238917.1;Name=WP_001238917.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=AB25_RS07230;product=50S ribosomal protein L15;protein_id=WP_001238917.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 16765 16944 . - . ID=gene-AB25_RS07225;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=AB25_RS07225;old_locus_tag=AB25_3804 NZ_JJMC01000058.1 Protein Homology CDS 16765 16944 . - 0 ID=cds-WP_001140433.1;Parent=gene-AB25_RS07225;Dbxref=GenBank:WP_001140433.1;Name=WP_001140433.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=AB25_RS07225;product=50S ribosomal protein L30;protein_id=WP_001140433.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 16948 17451 . - . ID=gene-AB25_RS07220;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=AB25_RS07220;old_locus_tag=AB25_3805 NZ_JJMC01000058.1 Protein Homology CDS 16948 17451 . - 0 ID=cds-WP_000940121.1;Parent=gene-AB25_RS07220;Dbxref=GenBank:WP_000940121.1;Name=WP_000940121.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106339.1;locus_tag=AB25_RS07220;product=30S ribosomal protein S5;protein_id=WP_000940121.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 17466 17819 . - . ID=gene-AB25_RS07215;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=AB25_RS07215;old_locus_tag=AB25_3806 NZ_JJMC01000058.1 Protein Homology CDS 17466 17819 . - 0 ID=cds-WP_000358960.1;Parent=gene-AB25_RS07215;Dbxref=GenBank:WP_000358960.1;Name=WP_000358960.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=AB25_RS07215;product=50S ribosomal protein L18;protein_id=WP_000358960.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 17829 18362 . - . ID=gene-AB25_RS07210;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=AB25_RS07210;old_locus_tag=AB25_3807 NZ_JJMC01000058.1 Protein Homology CDS 17829 18362 . - 0 ID=cds-WP_000091945.1;Parent=gene-AB25_RS07210;Dbxref=GenBank:WP_000091945.1;Name=WP_000091945.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=AB25_RS07210;product=50S ribosomal protein L6;protein_id=WP_000091945.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 18375 18767 . - . ID=gene-AB25_RS07205;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=AB25_RS07205;old_locus_tag=AB25_3808 NZ_JJMC01000058.1 Protein Homology CDS 18375 18767 . - 0 ID=cds-WP_000062611.1;Parent=gene-AB25_RS07205;Dbxref=GenBank:WP_000062611.1;Name=WP_000062611.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=AB25_RS07205;product=30S ribosomal protein S8;protein_id=WP_000062611.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 18801 19106 . - . ID=gene-AB25_RS07200;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=AB25_RS07200;old_locus_tag=AB25_3809 NZ_JJMC01000058.1 Protein Homology CDS 18801 19106 . - 0 ID=cds-WP_001118930.1;Parent=gene-AB25_RS07200;Dbxref=GenBank:WP_001118930.1;Name=WP_001118930.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1;locus_tag=AB25_RS07200;product=30S ribosomal protein S14;protein_id=WP_001118930.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 19121 19660 . - . ID=gene-AB25_RS07195;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=AB25_RS07195;old_locus_tag=AB25_3810 NZ_JJMC01000058.1 Protein Homology CDS 19121 19660 . - 0 ID=cds-WP_001096200.1;Parent=gene-AB25_RS07195;Dbxref=GenBank:WP_001096200.1;Name=WP_001096200.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=AB25_RS07195;product=50S ribosomal protein L5;protein_id=WP_001096200.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 19675 19989 . - . ID=gene-AB25_RS07190;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=AB25_RS07190;old_locus_tag=AB25_3811 NZ_JJMC01000058.1 Protein Homology CDS 19675 19989 . - 0 ID=cds-WP_000729185.1;Parent=gene-AB25_RS07190;Dbxref=GenBank:WP_000729185.1;Name=WP_000729185.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=AB25_RS07190;product=50S ribosomal protein L24;protein_id=WP_000729185.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 20000 20371 . - . ID=gene-AB25_RS07185;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=AB25_RS07185;old_locus_tag=AB25_3812 NZ_JJMC01000058.1 Protein Homology CDS 20000 20371 . - 0 ID=cds-WP_000613955.1;Parent=gene-AB25_RS07185;Dbxref=GenBank:WP_000613955.1;Name=WP_000613955.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=AB25_RS07185;product=50S ribosomal protein L14;protein_id=WP_000613955.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 20536 20790 . - . ID=gene-AB25_RS07180;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=AB25_RS07180;old_locus_tag=AB25_3813 NZ_JJMC01000058.1 Protein Homology CDS 20536 20790 . - 0 ID=cds-WP_000130100.1;Parent=gene-AB25_RS07180;Dbxref=GenBank:WP_000130100.1;Name=WP_000130100.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=AB25_RS07180;product=30S ribosomal protein S17;protein_id=WP_000130100.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 20790 20981 . - . ID=gene-AB25_RS07175;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=AB25_RS07175;old_locus_tag=AB25_3814 NZ_JJMC01000058.1 Protein Homology CDS 20790 20981 . - 0 ID=cds-WP_000644741.1;Parent=gene-AB25_RS07175;Dbxref=GenBank:WP_000644741.1;Name=WP_000644741.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1;locus_tag=AB25_RS07175;product=50S ribosomal protein L29;protein_id=WP_000644741.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 20981 21391 . - . ID=gene-AB25_RS07170;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=AB25_RS07170;old_locus_tag=AB25_3815 NZ_JJMC01000058.1 Protein Homology CDS 20981 21391 . - 0 ID=cds-WP_000941212.1;Parent=gene-AB25_RS07170;Dbxref=GenBank:WP_000941212.1;Name=WP_000941212.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=AB25_RS07170;product=50S ribosomal protein L16;protein_id=WP_000941212.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 21404 22105 . - . ID=gene-AB25_RS07165;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=AB25_RS07165;old_locus_tag=AB25_3816 NZ_JJMC01000058.1 Protein Homology CDS 21404 22105 . - 0 ID=cds-WP_000529945.1;Parent=gene-AB25_RS07165;Dbxref=GenBank:WP_000529945.1;Name=WP_000529945.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1;locus_tag=AB25_RS07165;product=30S ribosomal protein S3;protein_id=WP_000529945.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 22123 22455 . - . ID=gene-AB25_RS07160;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=AB25_RS07160;old_locus_tag=AB25_3817 NZ_JJMC01000058.1 Protein Homology CDS 22123 22455 . - 0 ID=cds-WP_000447527.1;Parent=gene-AB25_RS07160;Dbxref=GenBank:WP_000447527.1;Name=WP_000447527.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=AB25_RS07160;product=50S ribosomal protein L22;protein_id=WP_000447527.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 22470 22748 . - . ID=gene-AB25_RS0126150;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=AB25_RS0126150 NZ_JJMC01000058.1 Protein Homology CDS 22470 22748 . - 0 ID=cds-WP_001138117.1;Parent=gene-AB25_RS0126150;Dbxref=GenBank:WP_001138117.1;Name=WP_001138117.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=AB25_RS0126150;product=30S ribosomal protein S19;protein_id=WP_001138117.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 22765 23586 . - . ID=gene-AB25_RS07155;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=AB25_RS07155;old_locus_tag=AB25_3819 NZ_JJMC01000058.1 Protein Homology CDS 22765 23586 . - 0 ID=cds-WP_000301864.1;Parent=gene-AB25_RS07155;Dbxref=GenBank:WP_000301864.1;Name=WP_000301864.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1;locus_tag=AB25_RS07155;product=50S ribosomal protein L2;protein_id=WP_000301864.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 23604 23906 . - . ID=gene-AB25_RS07150;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=AB25_RS07150;old_locus_tag=AB25_3820 NZ_JJMC01000058.1 Protein Homology CDS 23604 23906 . - 0 ID=cds-WP_000617544.1;Parent=gene-AB25_RS07150;Dbxref=GenBank:WP_000617544.1;Name=WP_000617544.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=AB25_RS07150;product=50S ribosomal protein L23;protein_id=WP_000617544.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 23903 24508 . - . ID=gene-AB25_RS07145;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=AB25_RS07145;old_locus_tag=AB25_3821 NZ_JJMC01000058.1 Protein Homology CDS 23903 24508 . - 0 ID=cds-WP_000424395.1;Parent=gene-AB25_RS07145;Dbxref=GenBank:WP_000424395.1;Name=WP_000424395.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=AB25_RS07145;product=50S ribosomal protein L4;protein_id=WP_000424395.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 24519 25148 . - . ID=gene-AB25_RS07140;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=AB25_RS07140;old_locus_tag=AB25_3822 NZ_JJMC01000058.1 Protein Homology CDS 24519 25148 . - 0 ID=cds-WP_000579833.1;Parent=gene-AB25_RS07140;Dbxref=GenBank:WP_000579833.1;Name=WP_000579833.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=AB25_RS07140;product=50S ribosomal protein L3;protein_id=WP_000579833.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 25181 25492 . - . ID=gene-AB25_RS07135;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=AB25_RS07135;old_locus_tag=AB25_3823 NZ_JJMC01000058.1 Protein Homology CDS 25181 25492 . - 0 ID=cds-WP_001181004.1;Parent=gene-AB25_RS07135;Dbxref=GenBank:WP_001181004.1;Name=WP_001181004.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=AB25_RS07135;product=30S ribosomal protein S10;protein_id=WP_001181004.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 25730 26149 . - . ID=gene-AB25_RS07130;Name=gspB;gbkey=Gene;gene=gspB;gene_biotype=protein_coding;locus_tag=AB25_RS07130;old_locus_tag=AB25_3824 NZ_JJMC01000058.1 Protein Homology CDS 25730 26149 . - 0 ID=cds-WP_000461449.1;Parent=gene-AB25_RS07130;Dbxref=GenBank:WP_000461449.1;Name=WP_000461449.1;gbkey=CDS;gene=gspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417781.1;locus_tag=AB25_RS07130;product=putative general secretion pathway protein GspB;protein_id=WP_000461449.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 26151 27620 . - . ID=gene-AB25_RS07125;Name=gspA;gbkey=Gene;gene=gspA;gene_biotype=protein_coding;locus_tag=AB25_RS07125;old_locus_tag=AB25_3825 NZ_JJMC01000058.1 Protein Homology CDS 26151 27620 . - 0 ID=cds-WP_000107576.1;Parent=gene-AB25_RS07125;Dbxref=GenBank:WP_000107576.1;Name=WP_000107576.1;gbkey=CDS;gene=gspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417782.1;locus_tag=AB25_RS07125;product=type II secretion system protein GspA;protein_id=WP_000107576.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 27800 28615 . + . ID=gene-AB25_RS07120;Name=gspC;gbkey=Gene;gene=gspC;gene_biotype=protein_coding;locus_tag=AB25_RS07120;old_locus_tag=AB25_3826 NZ_JJMC01000058.1 Protein Homology CDS 27800 28615 . + 0 ID=cds-WP_001142703.1;Parent=gene-AB25_RS07120;Dbxref=GenBank:WP_001142703.1;Name=WP_001142703.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspC;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417783.1;locus_tag=AB25_RS07120;product=type II secretion system protein GspC;protein_id=WP_001142703.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 28599 30551 . + . ID=gene-AB25_RS07115;Name=gspD;gbkey=Gene;gene=gspD;gene_biotype=protein_coding;locus_tag=AB25_RS07115;old_locus_tag=AB25_3827 NZ_JJMC01000058.1 Protein Homology CDS 28599 30551 . + 0 ID=cds-WP_032171515.1;Parent=gene-AB25_RS07115;Dbxref=GenBank:WP_032171515.1;Name=WP_032171515.1;Ontology_term=GO:0015628,GO:0015627,GO:0019867;gbkey=CDS;gene=gspD;go_component=type II protein secretion system complex|0015627||IEA,outer membrane|0019867||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417784.4;locus_tag=AB25_RS07115;product=type II secretion system secretin GspD;protein_id=WP_032171515.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 30561 32042 . + . ID=gene-AB25_RS07110;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=AB25_RS07110;old_locus_tag=AB25_3828 NZ_JJMC01000058.1 Protein Homology CDS 30561 32042 . + 0 ID=cds-WP_001219897.1;Parent=gene-AB25_RS07110;Dbxref=GenBank:WP_001219897.1;Name=WP_001219897.1;Ontology_term=GO:0015628,GO:0005524,GO:0015627;gbkey=CDS;gene=gspE;go_component=type II protein secretion system complex|0015627||IEA;go_function=ATP binding|0005524||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417785.1;locus_tag=AB25_RS07110;product=type II secretion system ATPase GspE;protein_id=WP_001219897.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 32039 33235 . + . ID=gene-AB25_RS07105;Name=gspF;gbkey=Gene;gene=gspF;gene_biotype=protein_coding;locus_tag=AB25_RS07105;old_locus_tag=AB25_3829 NZ_JJMC01000058.1 Protein Homology CDS 32039 33235 . + 0 ID=cds-WP_001109573.1;Parent=gene-AB25_RS07105;Dbxref=GenBank:WP_001109573.1;Name=WP_001109573.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspF;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417786.1;locus_tag=AB25_RS07105;product=type II secretion system inner membrane protein GspF;protein_id=WP_001109573.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 33245 33682 . + . ID=gene-AB25_RS07100;Name=gspG;gbkey=Gene;gene=gspG;gene_biotype=protein_coding;locus_tag=AB25_RS07100;old_locus_tag=AB25_3830 NZ_JJMC01000058.1 Protein Homology CDS 33245 33682 . + 0 ID=cds-WP_001202880.1;Parent=gene-AB25_RS07100;Dbxref=GenBank:WP_001202880.1;Name=WP_001202880.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspG;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417787.1;locus_tag=AB25_RS07100;product=type II secretion system major pseudopilin GspG;protein_id=WP_001202880.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 33690 34199 . + . ID=gene-AB25_RS07095;Name=gspH;gbkey=Gene;gene=gspH;gene_biotype=protein_coding;locus_tag=AB25_RS07095;old_locus_tag=AB25_3831 NZ_JJMC01000058.1 Protein Homology CDS 33690 34199 . + 0 ID=cds-WP_001076048.1;Parent=gene-AB25_RS07095;Dbxref=GenBank:WP_001076048.1;Name=WP_001076048.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspH;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417788.1;locus_tag=AB25_RS07095;product=type II secretion system minor pseudopilin GspH;protein_id=WP_001076048.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 34196 34573 . + . ID=gene-AB25_RS07090;Name=gspI;gbkey=Gene;gene=gspI;gene_biotype=protein_coding;locus_tag=AB25_RS07090;old_locus_tag=AB25_3832 NZ_JJMC01000058.1 Protein Homology CDS 34196 34573 . + 0 ID=cds-WP_001041743.1;Parent=gene-AB25_RS07090;Dbxref=GenBank:WP_001041743.1;Name=WP_001041743.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspI;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417789.4;locus_tag=AB25_RS07090;product=type II secretion system minor pseudopilin GspI;protein_id=WP_001041743.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 34566 35153 . + . ID=gene-AB25_RS07085;Name=gspJ;gbkey=Gene;gene=gspJ;gene_biotype=protein_coding;locus_tag=AB25_RS07085;old_locus_tag=AB25_3833 NZ_JJMC01000058.1 Protein Homology CDS 34566 35153 . + 0 ID=cds-WP_000610634.1;Parent=gene-AB25_RS07085;Dbxref=GenBank:WP_000610634.1;Name=WP_000610634.1;gbkey=CDS;gene=gspJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417790.1;locus_tag=AB25_RS07085;product=type II secretion system minor pseudopilin GspJ;protein_id=WP_000610634.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 35146 36129 . + . ID=gene-AB25_RS07080;Name=gspK;gbkey=Gene;gene=gspK;gene_biotype=protein_coding;locus_tag=AB25_RS07080;old_locus_tag=AB25_3834 NZ_JJMC01000058.1 Protein Homology CDS 35146 36129 . + 0 ID=cds-WP_001058522.1;Parent=gene-AB25_RS07080;Dbxref=GenBank:WP_001058522.1;Name=WP_001058522.1;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=gspK;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417791.1;locus_tag=AB25_RS07080;product=type II secretion system minor pseudopilin GspK;protein_id=WP_001058522.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 36144 37307 . + . ID=gene-AB25_RS07075;Name=gspL;gbkey=Gene;gene=gspL;gene_biotype=protein_coding;locus_tag=AB25_RS07075;old_locus_tag=AB25_3835 NZ_JJMC01000058.1 Protein Homology CDS 36144 37307 . + 0 ID=cds-WP_001115230.1;Parent=gene-AB25_RS07075;Dbxref=GenBank:WP_001115230.1;Name=WP_001115230.1;Ontology_term=GO:0015628,GO:0009276,GO:0015627;gbkey=CDS;gene=gspL;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417792.2;locus_tag=AB25_RS07075;product=type II secretion system protein GspL;protein_id=WP_001115230.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 37304 37765 . + . ID=gene-AB25_RS07070;Name=gspM;gbkey=Gene;gene=gspM;gene_biotype=protein_coding;locus_tag=AB25_RS07070;old_locus_tag=AB25_3836 NZ_JJMC01000058.1 Protein Homology CDS 37304 37765 . + 0 ID=cds-WP_001295161.1;Parent=gene-AB25_RS07070;Dbxref=GenBank:WP_001295161.1;Name=WP_001295161.1;gbkey=CDS;gene=gspM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417793.2;locus_tag=AB25_RS07070;product=type II secretion system protein GspM;protein_id=WP_001295161.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 37765 38442 . + . ID=gene-AB25_RS07065;Name=gspO;gbkey=Gene;gene=gspO;gene_biotype=protein_coding;locus_tag=AB25_RS07065;old_locus_tag=AB25_3837 NZ_JJMC01000058.1 Protein Homology CDS 37765 38442 . + 0 ID=cds-WP_000178161.1;Parent=gene-AB25_RS07065;Dbxref=GenBank:WP_000178161.1;Name=WP_000178161.1;gbkey=CDS;gene=gspO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417794.1;locus_tag=AB25_RS07065;product=prepilin peptidase GspO;protein_id=WP_000178161.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 38471 38947 . - . ID=gene-AB25_RS07060;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=AB25_RS07060;old_locus_tag=AB25_3838 NZ_JJMC01000058.1 Protein Homology CDS 38471 38947 . - 0 ID=cds-WP_000675504.1;Parent=gene-AB25_RS07060;Dbxref=GenBank:WP_000675504.1;Name=WP_000675504.1;Ontology_term=GO:0006879,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417795.1;locus_tag=AB25_RS07060;product=bacterioferritin;protein_id=WP_000675504.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 39019 39213 . - . ID=gene-AB25_RS07055;Name=bfd;gbkey=Gene;gene=bfd;gene_biotype=protein_coding;locus_tag=AB25_RS07055;old_locus_tag=AB25_3839 NZ_JJMC01000058.1 Protein Homology CDS 39019 39213 . - 0 ID=cds-WP_000289085.1;Parent=gene-AB25_RS07055;Dbxref=GenBank:WP_000289085.1;Name=WP_000289085.1;gbkey=CDS;gene=bfd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417796.1;locus_tag=AB25_RS07055;product=bacterioferritin-associated ferredoxin;protein_id=WP_000289085.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 39382 42075 . - . ID=gene-AB25_RS07050;Name=chiA;gbkey=Gene;gene=chiA;gene_biotype=protein_coding;locus_tag=AB25_RS07050;old_locus_tag=AB25_3841 NZ_JJMC01000058.1 Protein Homology CDS 39382 42075 . - 0 ID=cds-WP_032171508.1;Parent=gene-AB25_RS07050;Dbxref=GenBank:WP_032171508.1;Name=WP_032171508.1;gbkey=CDS;gene=chiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417797.1;locus_tag=AB25_RS07050;product=bifunctional chitinase/lysozyme;protein_id=WP_032171508.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 42367 43551 . - . ID=gene-AB25_RS07045;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=AB25_RS07045;old_locus_tag=AB25_3842 NZ_JJMC01000058.1 Protein Homology CDS 42367 43551 . - 0 ID=cds-WP_000031783.1;Parent=gene-AB25_RS07045;Dbxref=GenBank:WP_000031783.1;Name=WP_000031783.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=AB25_RS07045;product=elongation factor Tu;protein_id=WP_000031783.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 43622 45736 . - . ID=gene-AB25_RS07040;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=AB25_RS07040;old_locus_tag=AB25_3843 NZ_JJMC01000058.1 Protein Homology CDS 43622 45736 . - 0 ID=cds-WP_000124700.1;Parent=gene-AB25_RS07040;Dbxref=GenBank:WP_000124700.1;Name=WP_000124700.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1;locus_tag=AB25_RS07040;product=elongation factor G;protein_id=WP_000124700.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 45833 46303 . - . ID=gene-AB25_RS07035;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=AB25_RS07035;old_locus_tag=AB25_3844 NZ_JJMC01000058.1 Protein Homology CDS 45833 46303 . - 0 ID=cds-WP_001138043.1;Parent=gene-AB25_RS07035;Dbxref=GenBank:WP_001138043.1;Name=WP_001138043.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=AB25_RS07035;product=30S ribosomal protein S7;protein_id=WP_001138043.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 46400 46774 . - . ID=gene-AB25_RS07030;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=AB25_RS07030;old_locus_tag=AB25_3845 NZ_JJMC01000058.1 Protein Homology CDS 46400 46774 . - 0 ID=cds-WP_000246815.1;Parent=gene-AB25_RS07030;Dbxref=GenBank:WP_000246815.1;Name=WP_000246815.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1;locus_tag=AB25_RS07030;product=30S ribosomal protein S12;protein_id=WP_000246815.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 46900 47187 . - . ID=gene-AB25_RS07025;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=AB25_RS07025;old_locus_tag=AB25_3846 NZ_JJMC01000058.1 Protein Homology CDS 46900 47187 . - 0 ID=cds-WP_000903377.1;Parent=gene-AB25_RS07025;Dbxref=GenBank:WP_000903377.1;Name=WP_000903377.1;Ontology_term=GO:0002143;gbkey=CDS;gene=tusB;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312221.1;locus_tag=AB25_RS07025;product=sulfurtransferase complex subunit TusB;protein_id=WP_000903377.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 47195 47554 . - . ID=gene-AB25_RS07020;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=AB25_RS07020;old_locus_tag=AB25_3847 NZ_JJMC01000058.1 Protein Homology CDS 47195 47554 . - 0 ID=cds-WP_000820720.1;Parent=gene-AB25_RS07020;Dbxref=GenBank:WP_000820720.1;Name=WP_000820720.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417803.1;locus_tag=AB25_RS07020;product=sulfurtransferase complex subunit TusC;protein_id=WP_000820720.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 47554 47940 . - . ID=gene-AB25_RS07015;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=AB25_RS07015;old_locus_tag=AB25_3848 NZ_JJMC01000058.1 Protein Homology CDS 47554 47940 . - 0 ID=cds-WP_001209710.1;Parent=gene-AB25_RS07015;Dbxref=GenBank:WP_001209710.1;Name=WP_001209710.1;Ontology_term=GO:0008033,GO:0016783;gbkey=CDS;gene=tusD;go_function=sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709119.1;locus_tag=AB25_RS07015;product=sulfurtransferase complex subunit TusD;protein_id=WP_001209710.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 47940 48662 . - . ID=gene-AB25_RS07010;Name=yheO;gbkey=Gene;gene=yheO;gene_biotype=protein_coding;locus_tag=AB25_RS07010;old_locus_tag=AB25_3849 NZ_JJMC01000058.1 Protein Homology CDS 47940 48662 . - 0 ID=cds-WP_000091466.1;Parent=gene-AB25_RS07010;Dbxref=GenBank:WP_000091466.1;Name=WP_000091466.1;Ontology_term=GO:0006355,GO:0007165,GO:0003677,GO:0003700,GO:0005515,GO:0140110;gbkey=CDS;gene=yheO;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,protein binding|0005515||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709120.2;locus_tag=AB25_RS07010;product=helix-turn-helix transcriptional regulator;protein_id=WP_000091466.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 48829 49641 . - . ID=gene-AB25_RS07005;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=AB25_RS07005;old_locus_tag=AB25_3850 NZ_JJMC01000058.1 Protein Homology CDS 48829 49641 . - 0 ID=cds-WP_000838261.1;Parent=gene-AB25_RS07005;Dbxref=GenBank:WP_000838261.1;Name=WP_000838261.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;gene=fkpA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312225.1;locus_tag=AB25_RS07005;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000838261.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 49862 50080 . + . ID=gene-AB25_RS07000;Name=slyX;gbkey=Gene;gene=slyX;gene_biotype=protein_coding;locus_tag=AB25_RS07000;old_locus_tag=AB25_3851 NZ_JJMC01000058.1 Protein Homology CDS 49862 50080 . + 0 ID=cds-WP_001153619.1;Parent=gene-AB25_RS07000;Dbxref=GenBank:WP_001153619.1;Name=WP_001153619.1;gbkey=CDS;gene=slyX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312226.1;locus_tag=AB25_RS07000;product=protein SlyX;protein_id=WP_001153619.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 50129 50719 . - . ID=gene-AB25_RS06995;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=AB25_RS06995;old_locus_tag=AB25_3852 NZ_JJMC01000058.1 Protein Homology CDS 50129 50719 . - 0 ID=cds-WP_032171313.1;Parent=gene-AB25_RS06995;Dbxref=GenBank:WP_032171313.1;Name=WP_032171313.1;Ontology_term=GO:0003755;gbkey=CDS;gene=slyD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312227.1;locus_tag=AB25_RS06995;product=peptidylprolyl isomerase;protein_id=WP_032171313.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 50814 51014 . - . ID=gene-AB25_RS06990;Name=yheV;gbkey=Gene;gene=yheV;gene_biotype=protein_coding;locus_tag=AB25_RS06990;old_locus_tag=AB25_3853 NZ_JJMC01000058.1 Protein Homology CDS 50814 51014 . - 0 ID=cds-WP_001007730.1;Parent=gene-AB25_RS06990;Dbxref=GenBank:WP_001007730.1;Name=WP_001007730.1;gbkey=CDS;gene=yheV;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588468.1;locus_tag=AB25_RS06990;product=YheV family putative zinc ribbon protein;protein_id=WP_001007730.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 51024 52829 . - . ID=gene-AB25_RS06985;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=protein_coding;locus_tag=AB25_RS06985;old_locus_tag=AB25_3854 NZ_JJMC01000058.1 Protein Homology CDS 51024 52829 . - 0 ID=cds-WP_000399122.1;Parent=gene-AB25_RS06985;Dbxref=GenBank:WP_000399122.1;Name=WP_000399122.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefB;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417809.1;locus_tag=AB25_RS06985;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=WP_000399122.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 52829 53380 . - . ID=gene-AB25_RS06980;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=protein_coding;locus_tag=AB25_RS06980;old_locus_tag=AB25_3855 NZ_JJMC01000058.1 Protein Homology CDS 52829 53380 . - 0 ID=cds-WP_001297514.1;Parent=gene-AB25_RS06980;Dbxref=GenBank:WP_001297514.1;Name=WP_001297514.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefG;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312229.2;locus_tag=AB25_RS06980;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WP_001297514.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 53511 55424 . + . ID=gene-AB25_RS06975;Name=yheS;gbkey=Gene;gene=yheS;gene_biotype=protein_coding;locus_tag=AB25_RS06975;old_locus_tag=AB25_3856 NZ_JJMC01000058.1 Protein Homology CDS 53511 55424 . + 0 ID=cds-WP_000634789.1;Parent=gene-AB25_RS06975;Dbxref=GenBank:WP_000634789.1;Name=WP_000634789.1;Ontology_term=GO:0005524;gbkey=CDS;gene=yheS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312230.1;locus_tag=AB25_RS06975;product=ABC transporter ATP-binding protein;protein_id=WP_000634789.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 55424 56446 . + . ID=gene-AB25_RS06970;Name=yheT;gbkey=Gene;gene=yheT;gene_biotype=protein_coding;locus_tag=AB25_RS06970;old_locus_tag=AB25_3857 NZ_JJMC01000058.1 Protein Homology CDS 55424 56446 . + 0 ID=cds-WP_000057380.1;Parent=gene-AB25_RS06970;Dbxref=GenBank:WP_000057380.1;Name=WP_000057380.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yheT;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312231.1;locus_tag=AB25_RS06970;product=hydrolase;protein_id=WP_000057380.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 56440 56658 . + . ID=gene-AB25_RS06965;Name=yheU;gbkey=Gene;gene=yheU;gene_biotype=protein_coding;locus_tag=AB25_RS06965;old_locus_tag=AB25_3858 NZ_JJMC01000058.1 Protein Homology CDS 56440 56658 . + 0 ID=cds-WP_000907085.1;Parent=gene-AB25_RS06965;Dbxref=GenBank:WP_000907085.1;Name=WP_000907085.1;gbkey=CDS;gene=yheU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312232.1;locus_tag=AB25_RS06965;product=YheU family protein;protein_id=WP_000907085.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 56712 57581 . + . ID=gene-AB25_RS06960;Name=prkB;gbkey=Gene;gene=prkB;gene_biotype=protein_coding;locus_tag=AB25_RS06960;old_locus_tag=AB25_3859 NZ_JJMC01000058.1 Protein Homology CDS 56712 57581 . + 0 ID=cds-WP_001274680.1;Parent=gene-AB25_RS06960;Dbxref=GenBank:WP_001274680.1;Name=WP_001274680.1;Ontology_term=GO:0005975,GO:0005524,GO:0008974;gbkey=CDS;gene=prkB;go_function=ATP binding|0005524||IEA,phosphoribulokinase activity|0008974||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417814.1;locus_tag=AB25_RS06960;product=phosphoribulokinase;protein_id=WP_001274680.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 57636 58040 . - . ID=gene-AB25_RS06955;Name=yhfA;gbkey=Gene;gene=yhfA;gene_biotype=protein_coding;locus_tag=AB25_RS06955;old_locus_tag=AB25_3860 NZ_JJMC01000058.1 Protein Homology CDS 57636 58040 . - 0 ID=cds-WP_001148908.1;Parent=gene-AB25_RS06955;Dbxref=GenBank:WP_001148908.1;Name=WP_001148908.1;gbkey=CDS;gene=yhfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312234.1;locus_tag=AB25_RS06955;product=OsmC family protein;protein_id=WP_001148908.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 58342 58974 . + . ID=gene-AB25_RS06950;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=AB25_RS06950;old_locus_tag=AB25_3861 NZ_JJMC01000058.1 Protein Homology CDS 58342 58974 . + 0 ID=cds-WP_000242755.1;Parent=gene-AB25_RS06950;Dbxref=GenBank:WP_000242755.1;Name=WP_000242755.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312235.1;locus_tag=AB25_RS06950;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_000242755.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 59025 61115 . + . ID=gene-AB25_RS06945;Name=yhfK;gbkey=Gene;gene=yhfK;gene_biotype=protein_coding;locus_tag=AB25_RS06945;old_locus_tag=AB25_3862 NZ_JJMC01000058.1 Protein Homology CDS 59025 61115 . + 0 ID=cds-WP_001356225.1;Parent=gene-AB25_RS06945;Dbxref=GenBank:WP_001356225.1;Name=WP_001356225.1;gbkey=CDS;gene=yhfK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312236.3;locus_tag=AB25_RS06945;product=YccS/YhfK family putative transporter;protein_id=WP_001356225.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 61182 62402 . - . ID=gene-AB25_RS06940;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;gene_synonym=dapC;locus_tag=AB25_RS06940;old_locus_tag=AB25_3863 NZ_JJMC01000058.1 Protein Homology CDS 61182 62402 . - 0 ID=cds-WP_000963785.1;Parent=gene-AB25_RS06940;Dbxref=GenBank:WP_000963785.1;Name=WP_000963785.1;gbkey=CDS;gene=argD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417818.1;locus_tag=AB25_RS06940;product=bifunctional acetylornithine/succinyldiaminopimelate transaminase;protein_id=WP_000963785.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 62488 63051 . - . ID=gene-AB25_RS06935;Name=pabA;gbkey=Gene;gene=pabA;gene_biotype=protein_coding;locus_tag=AB25_RS06935;old_locus_tag=AB25_3864 NZ_JJMC01000058.1 Protein Homology CDS 62488 63051 . - 0 ID=cds-WP_000601847.1;Parent=gene-AB25_RS06935;Dbxref=GenBank:WP_000601847.1;Name=WP_000601847.1;gbkey=CDS;gene=pabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417819.1;locus_tag=AB25_RS06935;product=aminodeoxychorismate synthase component 2;protein_id=WP_000601847.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 63083 63685 . - . ID=gene-AB25_RS06930;Name=fic;gbkey=Gene;gene=fic;gene_biotype=protein_coding;locus_tag=AB25_RS06930;old_locus_tag=AB25_3865 NZ_JJMC01000058.1 Protein Homology CDS 63083 63685 . - 0 ID=cds-WP_001280624.1;Parent=gene-AB25_RS06930;Dbxref=GenBank:WP_001280624.1;Name=WP_001280624.1;gbkey=CDS;gene=fic;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417820.1;locus_tag=AB25_RS06930;product=putative adenosine monophosphate-protein transferase Fic;protein_id=WP_001280624.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 63675 63842 . - . ID=gene-AB25_RS0126160;Name=yhfG;gbkey=Gene;gene=yhfG;gene_biotype=protein_coding;locus_tag=AB25_RS0126160 NZ_JJMC01000058.1 Protein Homology CDS 63675 63842 . - 0 ID=cds-WP_000736860.1;Parent=gene-AB25_RS0126160;Dbxref=GenBank:WP_000736860.1;Name=WP_000736860.1;gbkey=CDS;gene=yhfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709137.1;locus_tag=AB25_RS0126160;product=YhfG family protein;protein_id=WP_000736860.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 63947 64519 . - . ID=gene-AB25_RS06925;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;gene_synonym=rotA;locus_tag=AB25_RS06925;old_locus_tag=AB25_3866 NZ_JJMC01000058.1 Protein Homology CDS 63947 64519 . - 0 ID=cds-WP_000477226.1;Parent=gene-AB25_RS06925;Dbxref=GenBank:WP_000477226.1;Name=WP_000477226.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312241.1;locus_tag=AB25_RS06925;product=peptidylprolyl isomerase A;protein_id=WP_000477226.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 64790 65971 . + . ID=gene-AB25_RS06920;Name=tsgA;gbkey=Gene;gene=tsgA;gene_biotype=protein_coding;locus_tag=AB25_RS06920;old_locus_tag=AB25_3868 NZ_JJMC01000058.1 Protein Homology CDS 64790 65971 . + 0 ID=cds-WP_000185247.1;Parent=gene-AB25_RS06920;Dbxref=GenBank:WP_000185247.1;Name=WP_000185247.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=tsgA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417823.1;locus_tag=AB25_RS06920;product=MFS transporter TsgA;protein_id=WP_000185247.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 66233 68776 . + . ID=gene-AB25_RS06915;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=AB25_RS06915;old_locus_tag=AB25_3869 NZ_JJMC01000058.1 Protein Homology CDS 66233 68776 . + 0 ID=cds-WP_000049213.1;Parent=gene-AB25_RS06915;Dbxref=GenBank:WP_000049213.1;Name=WP_000049213.1;gbkey=CDS;gene=nirB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709140.2;locus_tag=AB25_RS06915;product=NADPH-nitrite reductase large subunit;protein_id=WP_000049213.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 68773 69099 . + . ID=gene-AB25_RS06910;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=AB25_RS06910;old_locus_tag=AB25_3870 NZ_JJMC01000058.1 Protein Homology CDS 68773 69099 . + 0 ID=cds-WP_000084764.1;Parent=gene-AB25_RS06910;Dbxref=GenBank:WP_000084764.1;Name=WP_000084764.1;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312244.1;locus_tag=AB25_RS06910;product=nitrite reductase small subunit NirD;protein_id=WP_000084764.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 69226 70032 . + . ID=gene-AB25_RS06905;Name=nirC;gbkey=Gene;gene=nirC;gene_biotype=protein_coding;locus_tag=AB25_RS06905;old_locus_tag=AB25_3871 NZ_JJMC01000058.1 Protein Homology CDS 69226 70032 . + 0 ID=cds-WP_000493556.1;Parent=gene-AB25_RS06905;Dbxref=GenBank:WP_000493556.1;Name=WP_000493556.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=nirC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026212.2;locus_tag=AB25_RS06905;product=nitrite transporter NirC;protein_id=WP_000493556.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 70051 71424 . + . ID=gene-AB25_RS06900;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=AB25_RS06900;old_locus_tag=AB25_3872 NZ_JJMC01000058.1 Protein Homology CDS 70051 71424 . + 0 ID=cds-WP_000349855.1;Parent=gene-AB25_RS06900;Dbxref=GenBank:WP_000349855.1;Name=WP_000349855.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312246.1;locus_tag=AB25_RS06900;product=siroheme synthase CysG;protein_id=WP_000349855.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 71671 71838 . + . ID=gene-AB25_RS06895;Name=yhfL;gbkey=Gene;gene=yhfL;gene_biotype=protein_coding;locus_tag=AB25_RS06895;old_locus_tag=AB25_3873 NZ_JJMC01000058.1 Protein Homology CDS 71671 71838 . + 0 ID=cds-WP_001031834.1;Parent=gene-AB25_RS06895;Dbxref=GenBank:WP_001031834.1;Name=WP_001031834.1;gbkey=CDS;gene=yhfL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312247.1;locus_tag=AB25_RS06895;product=YhfL family protein;protein_id=WP_001031834.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 72133 73470 . + . ID=gene-AB25_RS06890;Name=frlA;gbkey=Gene;gene=frlA;gene_biotype=protein_coding;locus_tag=AB25_RS06890;old_locus_tag=AB25_3874 NZ_JJMC01000058.1 Protein Homology CDS 72133 73470 . + 0 ID=cds-WP_032171315.1;Parent=gene-AB25_RS06890;Dbxref=GenBank:WP_032171315.1;Name=WP_032171315.1;gbkey=CDS;gene=frlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417829.2;locus_tag=AB25_RS06890;product=fructoselysine/psicoselysine transporter;protein_id=WP_032171315.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 73491 74513 . + . ID=gene-AB25_RS06885;Name=frlB;gbkey=Gene;gene=frlB;gene_biotype=protein_coding;locus_tag=AB25_RS06885;old_locus_tag=AB25_3875 NZ_JJMC01000058.1 Protein Homology CDS 73491 74513 . + 0 ID=cds-WP_001295163.1;Parent=gene-AB25_RS06885;Dbxref=GenBank:WP_001295163.1;Name=WP_001295163.1;gbkey=CDS;gene=frlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417830.4;locus_tag=AB25_RS06885;product=fructoselysine 6-phosphate deglycase;protein_id=WP_001295163.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 74563 75393 . + . ID=gene-AB25_RS06880;Name=frlC;gbkey=Gene;gene=frlC;gene_biotype=protein_coding;locus_tag=AB25_RS06880;old_locus_tag=AB25_3876 NZ_JJMC01000058.1 Protein Homology CDS 74563 75393 . + 0 ID=cds-WP_000847831.1;Parent=gene-AB25_RS06880;Dbxref=GenBank:WP_000847831.1;Name=WP_000847831.1;gbkey=CDS;gene=frlC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026213.1;locus_tag=AB25_RS06880;product=fructoselysine 3-epimerase;protein_id=WP_000847831.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 75390 76175 . + . ID=gene-AB25_RS06875;Name=frlD;gbkey=Gene;gene=frlD;gene_biotype=protein_coding;locus_tag=AB25_RS06875;old_locus_tag=AB25_3877 NZ_JJMC01000058.1 Protein Homology CDS 75390 76175 . + 0 ID=cds-WP_000853346.1;Parent=gene-AB25_RS06875;Dbxref=GenBank:WP_000853346.1;Name=WP_000853346.1;gbkey=CDS;gene=frlD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709147.1;locus_tag=AB25_RS06875;product=fructoselysine 6-kinase;protein_id=WP_000853346.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 76275 77006 . + . ID=gene-AB25_RS06870;Name=frlR;gbkey=Gene;gene=frlR;gene_biotype=protein_coding;gene_synonym=yhfR;locus_tag=AB25_RS06870;old_locus_tag=AB25_3878 NZ_JJMC01000058.1 Protein Homology CDS 76275 77006 . + 0 ID=cds-WP_001276847.1;Parent=gene-AB25_RS06870;Dbxref=GenBank:WP_001276847.1;Name=WP_001276847.1;gbkey=CDS;gene=frlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417834.6;locus_tag=AB25_RS06870;product=DNA-binding transcriptional regulator FrlR;protein_id=WP_001276847.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 77158 78243 . - . ID=gene-AB25_RS06865;Name=yhfS;gbkey=Gene;gene=yhfS;gene_biotype=protein_coding;locus_tag=AB25_RS06865;old_locus_tag=AB25_3879 NZ_JJMC01000058.1 Protein Homology CDS 77158 78243 . - 0 ID=cds-WP_000847144.1;Parent=gene-AB25_RS06865;Dbxref=GenBank:WP_000847144.1;Name=WP_000847144.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;gene=yhfS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417835.1;locus_tag=AB25_RS06865;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_000847144.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 78255 79559 . - . ID=gene-AB25_RS06860;Name=yhfT;gbkey=Gene;gene=yhfT;gene_biotype=protein_coding;locus_tag=AB25_RS06860;old_locus_tag=AB25_3880 NZ_JJMC01000058.1 Protein Homology CDS 78255 79559 . - 0 ID=cds-WP_001392693.1;Parent=gene-AB25_RS06860;Dbxref=GenBank:WP_001392693.1;Name=WP_001392693.1;gbkey=CDS;gene=yhfT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709150.1;locus_tag=AB25_RS06860;product=YhfT family protein;protein_id=WP_001392693.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 79571 79924 . - . ID=gene-AB25_RS06855;Name=yhfU;gbkey=Gene;gene=yhfU;gene_biotype=protein_coding;locus_tag=AB25_RS06855;old_locus_tag=AB25_3881 NZ_JJMC01000058.1 Protein Homology CDS 79571 79924 . - 0 ID=cds-WP_001297518.1;Parent=gene-AB25_RS06855;Dbxref=GenBank:WP_001297518.1;Name=WP_001297518.1;gbkey=CDS;gene=yhfU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417837.2;locus_tag=AB25_RS06855;product=DUF2620 domain-containing protein;protein_id=WP_001297518.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 79935 80813 . - . ID=gene-AB25_RS06850;Name=php;gbkey=Gene;gene=php;gene_biotype=protein_coding;locus_tag=AB25_RS06850;old_locus_tag=AB25_3882 NZ_JJMC01000058.1 Protein Homology CDS 79935 80813 . - 0 ID=cds-WP_000007033.1;Parent=gene-AB25_RS06850;Dbxref=GenBank:WP_000007033.1;Name=WP_000007033.1;gbkey=CDS;gene=php;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417838.1;locus_tag=AB25_RS06850;product=phosphotriesterase-related protein;protein_id=WP_000007033.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 80810 82036 . - . ID=gene-AB25_RS06845;Name=yhfW;gbkey=Gene;gene=yhfW;gene_biotype=protein_coding;locus_tag=AB25_RS06845;old_locus_tag=AB25_3883 NZ_JJMC01000058.1 Protein Homology CDS 80810 82036 . - 0 ID=cds-WP_000090595.1;Parent=gene-AB25_RS06845;Dbxref=GenBank:WP_000090595.1;Name=WP_000090595.1;Ontology_term=GO:0008973;gbkey=CDS;gene=yhfW;go_function=phosphopentomutase activity|0008973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417839.1;locus_tag=AB25_RS06845;product=phosphopentomutase;protein_id=WP_000090595.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 82036 83199 . - . ID=gene-AB25_RS06840;Name=yhfX;gbkey=Gene;gene=yhfX;gene_biotype=protein_coding;locus_tag=AB25_RS06840;old_locus_tag=AB25_3884 NZ_JJMC01000058.1 Protein Homology CDS 82036 83199 . - 0 ID=cds-WP_000497372.1;Parent=gene-AB25_RS06840;Dbxref=GenBank:WP_000497372.1;Name=WP_000497372.1;gbkey=CDS;gene=yhfX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709154.1;locus_tag=AB25_RS06840;product=YhfX family PLP-dependent enzyme;protein_id=WP_000497372.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 83283 83645 . - . ID=gene-AB25_RS06835;Name=yhfY;gbkey=Gene;gene=yhfY;gene_biotype=protein_coding;locus_tag=AB25_RS06835;old_locus_tag=AB25_3885 NZ_JJMC01000058.1 Protein Homology CDS 83283 83645 . - 0 ID=cds-WP_001298733.1;Parent=gene-AB25_RS06835;Dbxref=GenBank:WP_001298733.1;Name=WP_001298733.1;gbkey=CDS;gene=yhfY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417841.2;locus_tag=AB25_RS06835;product=hypothetical protein;protein_id=WP_001298733.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 83662 84567 . - . ID=gene-AB25_RS06830;Name=yhfZ;gbkey=Gene;gene=yhfZ;gene_biotype=protein_coding;locus_tag=AB25_RS06830;old_locus_tag=AB25_3886 NZ_JJMC01000058.1 Protein Homology CDS 83662 84567 . - 0 ID=cds-WP_001254819.1;Parent=gene-AB25_RS06830;Dbxref=GenBank:WP_001254819.1;Name=WP_001254819.1;gbkey=CDS;gene=yhfZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026214.1;locus_tag=AB25_RS06830;product=GntR family transcriptional regulator YhfZ;protein_id=WP_001254819.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 84836 85840 . - . ID=gene-AB25_RS06825;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=AB25_RS06825;old_locus_tag=AB25_3887 NZ_JJMC01000058.1 Protein Homology CDS 84836 85840 . - 0 ID=cds-WP_000165553.1;Parent=gene-AB25_RS06825;Dbxref=GenBank:WP_000165553.1;Name=WP_000165553.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417843.1;locus_tag=AB25_RS06825;product=tryptophan--tRNA ligase;protein_id=WP_000165553.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 85833 86591 . - . ID=gene-AB25_RS06820;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=AB25_RS06820;old_locus_tag=AB25_3888 NZ_JJMC01000058.1 Protein Homology CDS 85833 86591 . - 0 ID=cds-WP_001031729.1;Parent=gene-AB25_RS06820;Dbxref=GenBank:WP_001031729.1;Name=WP_001031729.1;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;gene=gph;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417844.1;locus_tag=AB25_RS06820;product=phosphoglycolate phosphatase;protein_id=WP_001031729.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 86584 87261 . - . ID=gene-AB25_RS06815;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=AB25_RS06815;old_locus_tag=AB25_3889 NZ_JJMC01000058.1 Protein Homology CDS 86584 87261 . - 0 ID=cds-WP_000816280.1;Parent=gene-AB25_RS06815;Dbxref=GenBank:WP_000816280.1;Name=WP_000816280.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312255.1;locus_tag=AB25_RS06815;product=ribulose-phosphate 3-epimerase;protein_id=WP_000816280.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 87279 88115 . - . ID=gene-AB25_RS06810;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=AB25_RS06810;old_locus_tag=AB25_3890 NZ_JJMC01000058.1 Protein Homology CDS 87279 88115 . - 0 ID=cds-WP_000742143.1;Parent=gene-AB25_RS06810;Dbxref=GenBank:WP_000742143.1;Name=WP_000742143.1;Ontology_term=GO:0003676,GO:0009007;gbkey=CDS;gene=dam;go_function=nucleic acid binding|0003676||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312256.1;locus_tag=AB25_RS06810;product=adenine-specific DNA-methyltransferase;protein_id=WP_000742143.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 88222 89508 . - . ID=gene-AB25_RS06805;Name=damX;gbkey=Gene;gene=damX;gene_biotype=protein_coding;locus_tag=AB25_RS06805;old_locus_tag=AB25_3891 NZ_JJMC01000058.1 Protein Homology CDS 88222 89508 . - 0 ID=cds-WP_000343199.1;Parent=gene-AB25_RS06805;Dbxref=GenBank:WP_000343199.1;Name=WP_000343199.1;Ontology_term=GO:0032506,GO:0042834;gbkey=CDS;gene=damX;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312257.1;locus_tag=AB25_RS06805;product=cell division protein DamX;protein_id=WP_000343199.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 89600 90688 . - . ID=gene-AB25_RS06800;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=AB25_RS06800;old_locus_tag=AB25_3892 NZ_JJMC01000058.1 Protein Homology CDS 89600 90688 . - 0 ID=cds-WP_000439841.1;Parent=gene-AB25_RS06800;Dbxref=GenBank:WP_000439841.1;Name=WP_000439841.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417848.1;locus_tag=AB25_RS06800;product=3-dehydroquinate synthase;protein_id=WP_000439841.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 90745 91266 . - . ID=gene-AB25_RS06795;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=AB25_RS06795;old_locus_tag=AB25_3893 NZ_JJMC01000058.1 Protein Homology CDS 90745 91266 . - 0 ID=cds-WP_000818618.1;Parent=gene-AB25_RS06795;Dbxref=GenBank:WP_000818618.1;Name=WP_000818618.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1;locus_tag=AB25_RS06795;product=shikimate kinase AroK;protein_id=WP_000818618.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 91667 92905 . - . ID=gene-AB25_RS06790;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=protein_coding;locus_tag=AB25_RS06790;old_locus_tag=AB25_3894 NZ_JJMC01000058.1 Protein Homology CDS 91667 92905 . - 0 ID=cds-WP_000815968.1;Parent=gene-AB25_RS06790;Dbxref=GenBank:WP_000815968.1;Name=WP_000815968.1;Ontology_term=GO:0009306,GO:0019867;gbkey=CDS;gene=hofQ;go_component=outer membrane|0019867||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417850.1;locus_tag=AB25_RS06790;product=DNA uptake porin HofQ;protein_id=WP_000815968.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 92817 93221 . - . ID=gene-AB25_RS06785;Name=hofP;gbkey=Gene;gene=hofP;gene_biotype=protein_coding;locus_tag=AB25_RS06785;old_locus_tag=AB25_3895 NZ_JJMC01000058.1 Protein Homology CDS 92817 93221 . - 0 ID=cds-WP_001264141.1;Parent=gene-AB25_RS06785;Dbxref=GenBank:WP_001264141.1;Name=WP_001264141.1;gbkey=CDS;gene=hofP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417851.4;locus_tag=AB25_RS06785;product=DNA utilization protein HofP;protein_id=WP_001264141.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 93211 93651 . - . ID=gene-AB25_RS06780;Name=hofO;gbkey=Gene;gene=hofO;gene_biotype=protein_coding;locus_tag=AB25_RS06780;old_locus_tag=AB25_3896 NZ_JJMC01000058.1 Protein Homology CDS 93211 93651 . - 0 ID=cds-WP_032171320.1;Parent=gene-AB25_RS06780;Dbxref=GenBank:WP_032171320.1;Name=WP_032171320.1;gbkey=CDS;gene=hofO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417852.1;locus_tag=AB25_RS06780;product=DNA utilization protein HofO;protein_id=WP_032171320.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 93635 94174 . - . ID=gene-AB25_RS06775;Name=hofN;gbkey=Gene;gene=hofN;gene_biotype=protein_coding;locus_tag=AB25_RS06775;old_locus_tag=AB25_3897 NZ_JJMC01000058.1 Protein Homology CDS 93635 94174 . - 0 ID=cds-WP_001392755.1;Parent=gene-AB25_RS06775;Dbxref=GenBank:WP_001392755.1;Name=WP_001392755.1;gbkey=CDS;gene=hofN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312263.1;locus_tag=AB25_RS06775;product=DNA utilization protein HofN;protein_id=WP_001392755.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 94174 94953 . - . ID=gene-AB25_RS06770;Name=hofM;gbkey=Gene;gene=hofM;gene_biotype=protein_coding;locus_tag=AB25_RS06770;old_locus_tag=AB25_3898 NZ_JJMC01000058.1 Protein Homology CDS 94174 94953 . - 0 ID=cds-WP_001356223.1;Parent=gene-AB25_RS06770;Dbxref=GenBank:WP_001356223.1;Name=WP_001356223.1;gbkey=CDS;gene=hofM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417854.4;locus_tag=AB25_RS06770;product=DNA utilization protein HofM;protein_id=WP_001356223.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 95073 97625 . + . ID=gene-AB25_RS06765;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=AB25_RS06765;old_locus_tag=AB25_3899 NZ_JJMC01000058.1 Protein Homology CDS 95073 97625 . + 0 ID=cds-WP_001300707.1;Parent=gene-AB25_RS06765;Dbxref=GenBank:WP_001300707.1;Name=WP_001300707.1;Ontology_term=GO:0008658;gbkey=CDS;gene=mrcA;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312265.2;locus_tag=AB25_RS06765;product=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;protein_id=WP_001300707.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 97790 98350 . - . ID=gene-AB25_RS06760;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=AB25_RS06760;old_locus_tag=AB25_3900 NZ_JJMC01000058.1 Protein Homology CDS 97790 98350 . - 0 ID=cds-WP_000045744.1;Parent=gene-AB25_RS06760;Dbxref=GenBank:WP_000045744.1;Name=WP_000045744.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417856.1;locus_tag=AB25_RS06760;product=ADP compounds hydrolase NudE;protein_id=WP_000045744.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 98670 100805 . + . ID=gene-AB25_RS06755;Name=igaA;gbkey=Gene;gene=igaA;gene_biotype=protein_coding;locus_tag=AB25_RS06755;old_locus_tag=AB25_3902 NZ_JJMC01000058.1 Protein Homology CDS 98670 100805 . + 0 ID=cds-WP_000104554.1;Parent=gene-AB25_RS06755;Dbxref=GenBank:WP_000104554.1;Name=WP_000104554.1;gbkey=CDS;gene=igaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417857.1;locus_tag=AB25_RS06755;product=intracellular growth attenuator protein IgaA;protein_id=WP_000104554.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 100870 101538 . + . ID=gene-AB25_RS06750;Name=yrfG;gbkey=Gene;gene=yrfG;gene_biotype=protein_coding;locus_tag=AB25_RS06750;old_locus_tag=AB25_3903 NZ_JJMC01000058.1 Protein Homology CDS 100870 101538 . + 0 ID=cds-WP_001295168.1;Parent=gene-AB25_RS06750;Dbxref=GenBank:WP_001295168.1;Name=WP_001295168.1;gbkey=CDS;gene=yrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312268.2;locus_tag=AB25_RS06750;product=GMP/IMP nucleotidase;protein_id=WP_001295168.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 101549 101950 . + . ID=gene-AB25_RS06745;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=AB25_RS06745;old_locus_tag=AB25_3904 NZ_JJMC01000058.1 Protein Homology CDS 101549 101950 . + 0 ID=cds-WP_000660485.1;Parent=gene-AB25_RS06745;Dbxref=GenBank:WP_000660485.1;Name=WP_000660485.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709172.1;locus_tag=AB25_RS06745;product=ribosome-associated heat shock protein Hsp15;protein_id=WP_000660485.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 101975 102853 . + . ID=gene-AB25_RS06740;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=AB25_RS06740;old_locus_tag=AB25_3905 NZ_JJMC01000058.1 Protein Homology CDS 101975 102853 . + 0 ID=cds-WP_001135574.1;Parent=gene-AB25_RS06740;Dbxref=GenBank:WP_001135574.1;Name=WP_001135574.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417860.2;locus_tag=AB25_RS06740;product=Hsp33 family molecular chaperone HslO;protein_id=WP_001135574.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 102988 104712 . - . ID=gene-AB25_RS06735;Name=yhgE;gbkey=Gene;gene=yhgE;gene_biotype=protein_coding;locus_tag=AB25_RS06735;old_locus_tag=AB25_3906 NZ_JJMC01000058.1 Protein Homology CDS 102988 104712 . - 0 ID=cds-WP_032171323.1;Parent=gene-AB25_RS06735;Dbxref=GenBank:WP_032171323.1;Name=WP_032171323.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yhgE;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709174.1;locus_tag=AB25_RS06735;product=DUF4153 domain-containing protein;protein_id=WP_032171323.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 105091 106713 . + . ID=gene-AB25_RS06725;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=AB25_RS06725;old_locus_tag=AB25_3909 NZ_JJMC01000058.1 Protein Homology CDS 105091 106713 . + 0 ID=cds-WP_001265681.1;Parent=gene-AB25_RS06725;Dbxref=GenBank:WP_001265681.1;Name=WP_001265681.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417862.1;locus_tag=AB25_RS06725;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_001265681.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 106789 108141 . - . ID=gene-AB25_RS06720;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;locus_tag=AB25_RS06720;old_locus_tag=AB25_3910 NZ_JJMC01000058.1 Protein Homology CDS 106789 108141 . - 0 ID=cds-WP_001253696.1;Parent=gene-AB25_RS06720;Dbxref=GenBank:WP_001253696.1;Name=WP_001253696.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=envZ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417863.1;locus_tag=AB25_RS06720;product=two-component system sensor histidine kinase EnvZ;protein_id=WP_001253696.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 108138 108857 . - . ID=gene-AB25_RS06715;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=AB25_RS06715;old_locus_tag=AB25_3911 NZ_JJMC01000058.1 Protein Homology CDS 108138 108857 . - 0 ID=cds-WP_001157751.1;Parent=gene-AB25_RS06715;Dbxref=GenBank:WP_001157751.1;Name=WP_001157751.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=ompR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007374840.1;locus_tag=AB25_RS06715;product=osmolarity response regulator transcription factor OmpR;protein_id=WP_001157751.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 109085 109561 . + . ID=gene-AB25_RS06710;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=AB25_RS06710;old_locus_tag=AB25_3912 NZ_JJMC01000058.1 Protein Homology CDS 109085 109561 . + 0 ID=cds-WP_000856744.1;Parent=gene-AB25_RS06710;Dbxref=GenBank:WP_000856744.1;Name=WP_000856744.1;Ontology_term=GO:0032784,GO:0003677;gbkey=CDS;gene=greB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312275.2;locus_tag=AB25_RS06710;product=transcription elongation factor GreB;protein_id=WP_000856744.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 109658 111979 . + . ID=gene-AB25_RS06705;Name=yhgF;gbkey=Gene;gene=yhgF;gene_biotype=protein_coding;locus_tag=AB25_RS06705;old_locus_tag=AB25_3913 NZ_JJMC01000058.1 Protein Homology CDS 109658 111979 . + 0 ID=cds-WP_001526397.1;Parent=gene-AB25_RS06705;Dbxref=GenBank:WP_001526397.1;Name=WP_001526397.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;gene=yhgF;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417866.4;locus_tag=AB25_RS06705;product=Tex family protein;protein_id=WP_001526397.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 112417 112644 . + . ID=gene-AB25_RS06700;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=AB25_RS06700;old_locus_tag=AB25_3915 NZ_JJMC01000058.1 Protein Homology CDS 112417 112644 . + 0 ID=cds-WP_001200452.1;Parent=gene-AB25_RS06700;Dbxref=GenBank:WP_001200452.1;Name=WP_001200452.1;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312277.1;locus_tag=AB25_RS06700;product=ferrous iron transporter A;protein_id=WP_001200452.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 112661 114982 . + . ID=gene-AB25_RS06695;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=AB25_RS06695;old_locus_tag=AB25_3916 NZ_JJMC01000058.1 Protein Homology CDS 112661 114982 . + 0 ID=cds-WP_000737007.1;Parent=gene-AB25_RS06695;Dbxref=GenBank:WP_000737007.1;Name=WP_000737007.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417868.1;locus_tag=AB25_RS06695;product=Fe(2+) transporter permease subunit FeoB;protein_id=WP_000737007.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 114982 115218 . + . ID=gene-AB25_RS06690;Name=feoC;gbkey=Gene;gene=feoC;gene_biotype=protein_coding;locus_tag=AB25_RS06690;old_locus_tag=AB25_3917 NZ_JJMC01000058.1 Protein Homology CDS 114982 115218 . + 0 ID=cds-WP_000157586.1;Parent=gene-AB25_RS06690;Dbxref=GenBank:WP_000157586.1;Name=WP_000157586.1;gbkey=CDS;gene=feoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312279.1;locus_tag=AB25_RS06690;product=[Fe-S]-dependent transcriptional repressor FeoC;protein_id=WP_000157586.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 115421 116299 . + . ID=gene-AB25_RS06685;Name=rpnA;gbkey=Gene;gene=rpnA;gene_biotype=protein_coding;locus_tag=AB25_RS06685;old_locus_tag=AB25_3918 NZ_JJMC01000058.1 Protein Homology CDS 115421 116299 . + 0 ID=cds-WP_000039057.1;Parent=gene-AB25_RS06685;Dbxref=GenBank:WP_000039057.1;Name=WP_000039057.1;gbkey=CDS;gene=rpnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417870.1;locus_tag=AB25_RS06685;product=recombination-promoting nuclease RpnA;protein_id=WP_000039057.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 116328 117098 . - . ID=gene-AB25_RS06680;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=AB25_RS06680;old_locus_tag=AB25_3919 NZ_JJMC01000058.1 Protein Homology CDS 116328 117098 . - 0 ID=cds-WP_001060069.1;Parent=gene-AB25_RS06680;Dbxref=GenBank:WP_001060069.1;Name=WP_001060069.1;Ontology_term=GO:0052689;gbkey=CDS;gene=bioH;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417871.1;locus_tag=AB25_RS06680;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=WP_001060069.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 117136 117819 . + . ID=gene-AB25_RS06675;Name=gntX;gbkey=Gene;gene=gntX;gene_biotype=protein_coding;locus_tag=AB25_RS06675;old_locus_tag=AB25_3920 NZ_JJMC01000058.1 Protein Homology CDS 117136 117819 . + 0 ID=cds-WP_001309008.1;Parent=gene-AB25_RS06675;Dbxref=GenBank:WP_001309008.1;Name=WP_001309008.1;Ontology_term=GO:0009116;gbkey=CDS;gene=gntX;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417872.2;locus_tag=AB25_RS06675;product=DNA utilization protein GntX;protein_id=WP_001309008.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 117878 118453 . + . ID=gene-AB25_RS06670;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=AB25_RS06670;old_locus_tag=AB25_3921 NZ_JJMC01000058.1 Protein Homology CDS 117878 118453 . + 0 ID=cds-WP_000619389.1;Parent=gene-AB25_RS06670;Dbxref=GenBank:WP_000619389.1;Name=WP_000619389.1;Ontology_term=GO:0016226,GO:0051604,GO:0051539;gbkey=CDS;gene=nfuA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=AB25_RS06670;product=Fe-S biogenesis protein NfuA;protein_id=WP_000619389.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 118814 120130 . + . ID=gene-AB25_RS06665;Name=gntT;gbkey=Gene;gene=gntT;gene_biotype=protein_coding;locus_tag=AB25_RS06665;old_locus_tag=AB25_3922 NZ_JJMC01000058.1 Protein Homology CDS 118814 120130 . + 0 ID=cds-WP_001364285.1;Parent=gene-AB25_RS06665;Dbxref=GenBank:WP_001364285.1;Name=WP_001364285.1;gbkey=CDS;gene=gntT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312284.1;locus_tag=AB25_RS06665;product=gluconate transporter;protein_id=WP_001364285.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 120175 122259 . - . ID=gene-AB25_RS06660;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=AB25_RS06660;old_locus_tag=AB25_3923 NZ_JJMC01000058.1 Protein Homology CDS 120175 122259 . - 0 ID=cds-WP_032171327.1;Parent=gene-AB25_RS06660;Dbxref=GenBank:WP_032171327.1;Name=WP_032171327.1;Ontology_term=GO:0005975,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417875.1;locus_tag=AB25_RS06660;product=4-alpha-glucanotransferase;protein_id=WP_032171327.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 122269 124662 . - . ID=gene-AB25_RS06655;Name=malP;gbkey=Gene;gene=malP;gene_biotype=protein_coding;locus_tag=AB25_RS06655;old_locus_tag=AB25_3924 NZ_JJMC01000058.1 Protein Homology CDS 122269 124662 . - 0 ID=cds-WP_000081909.1;Parent=gene-AB25_RS06655;Dbxref=GenBank:WP_000081909.1;Name=WP_000081909.1;Ontology_term=GO:0005975,GO:0008184,GO:0030170;gbkey=CDS;gene=malP;go_function=glycogen phosphorylase activity|0008184||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026218.1;locus_tag=AB25_RS06655;product=maltodextrin phosphorylase;protein_id=WP_000081909.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 125274 127979 . + . ID=gene-AB25_RS06650;Name=malT;gbkey=Gene;gene=malT;gene_biotype=protein_coding;locus_tag=AB25_RS06650;old_locus_tag=AB25_3925 NZ_JJMC01000058.1 Protein Homology CDS 125274 127979 . + 0 ID=cds-WP_000906970.1;Parent=gene-AB25_RS06650;Dbxref=GenBank:WP_000906970.1;Name=WP_000906970.1;Ontology_term=GO:0006355,GO:0003677,GO:0005515;gbkey=CDS;gene=malT;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312287.1;locus_tag=AB25_RS06650;product=HTH-type transcriptional regulator MalT;protein_id=WP_000906970.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 128022 129038 . - . ID=gene-AB25_RS06645;Name=rtcA;gbkey=Gene;gene=rtcA;gene_biotype=protein_coding;locus_tag=AB25_RS06645;old_locus_tag=AB25_3926 NZ_JJMC01000058.1 Protein Homology CDS 128022 129038 . - 0 ID=cds-WP_001474728.1;Parent=gene-AB25_RS06645;Dbxref=GenBank:WP_001474728.1;Name=WP_001474728.1;Ontology_term=GO:0006396,GO:0003963;gbkey=CDS;gene=rtcA;go_function=RNA-3'-phosphate cyclase activity|0003963||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026219.1;locus_tag=AB25_RS06645;product=RNA 3'-terminal phosphate cyclase;protein_id=WP_001474728.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 129042 130268 . - . ID=gene-AB25_RS06640;Name=rtcB;gbkey=Gene;gene=rtcB;gene_biotype=protein_coding;locus_tag=AB25_RS06640;old_locus_tag=AB25_3927 NZ_JJMC01000058.1 Protein Homology CDS 129042 130268 . - 0 ID=cds-WP_001105503.1;Parent=gene-AB25_RS06640;Dbxref=GenBank:WP_001105503.1;Name=WP_001105503.1;gbkey=CDS;gene=rtcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417879.1;locus_tag=AB25_RS06640;product=RNA-splicing ligase RtcB;protein_id=WP_001105503.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 130457 132055 . + . ID=gene-AB25_RS06635;Name=rtcR;gbkey=Gene;gene=rtcR;gene_biotype=protein_coding;locus_tag=AB25_RS06635;old_locus_tag=AB25_3928 NZ_JJMC01000058.1 Protein Homology CDS 130457 132055 . + 0 ID=cds-WP_001232938.1;Parent=gene-AB25_RS06635;Dbxref=GenBank:WP_001232938.1;Name=WP_001232938.1;gbkey=CDS;gene=rtcR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417880.1;locus_tag=AB25_RS06635;product=DNA-binding transcriptional regulator RtcR;protein_id=WP_001232938.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 132037 132795 . - . ID=gene-AB25_RS06630;Name=AB25_RS06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS06630;old_locus_tag=AB25_3929 NZ_JJMC01000058.1 Protein Homology CDS 132037 132795 . - 0 ID=cds-WP_000815099.1;Parent=gene-AB25_RS06630;Dbxref=GenBank:WP_000815099.1;Name=WP_000815099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815090.1;locus_tag=AB25_RS06630;product=DeoR/GlpR family transcriptional regulator;protein_id=WP_000815099.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 132812 133642 . - . ID=gene-AB25_RS06625;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=AB25_RS06625;old_locus_tag=AB25_3930 NZ_JJMC01000058.1 Protein Homology CDS 132812 133642 . - 0 ID=cds-WP_000928731.1;Parent=gene-AB25_RS06625;Dbxref=GenBank:WP_000928731.1;Name=WP_000928731.1;Ontology_term=GO:0006508,GO:0004252,GO:0016020;gbkey=CDS;gene=glpG;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026220.1;locus_tag=AB25_RS06625;product=rhomboid family intramembrane serine protease GlpG;protein_id=WP_000928731.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 133687 134013 . - . ID=gene-AB25_RS06620;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=AB25_RS06620;old_locus_tag=AB25_3931 NZ_JJMC01000058.1 Protein Homology CDS 133687 134013 . - 0 ID=cds-WP_000371934.1;Parent=gene-AB25_RS06620;Dbxref=GenBank:WP_000371934.1;Name=WP_000371934.1;Ontology_term=GO:0004792;gbkey=CDS;gene=glpE;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417883.1;locus_tag=AB25_RS06620;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_000371934.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 134203 135708 . + . ID=gene-AB25_RS06615;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=AB25_RS06615;old_locus_tag=AB25_3932 NZ_JJMC01000058.1 Protein Homology CDS 134203 135708 . + 0 ID=cds-WP_000448153.1;Parent=gene-AB25_RS06615;Dbxref=GenBank:WP_000448153.1;Name=WP_000448153.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417884.1;locus_tag=AB25_RS06615;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_000448153.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 135762 136367 . - . ID=gene-AB25_RS06610;Name=AB25_RS06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS06610;old_locus_tag=AB25_3933 NZ_JJMC01000058.1 Protein Homology CDS 135762 136367 . - 0 ID=cds-WP_000589355.1;Parent=gene-AB25_RS06610;Dbxref=GenBank:WP_000589355.1;Name=WP_000589355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000589351.1;locus_tag=AB25_RS06610;product=hypothetical protein;protein_id=WP_000589355.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 136370 137137 . - . ID=gene-AB25_RS06605;Name=AB25_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS06605;old_locus_tag=AB25_3934 NZ_JJMC01000058.1 Protein Homology CDS 136370 137137 . - 0 ID=cds-WP_001183147.1;Parent=gene-AB25_RS06605;Dbxref=GenBank:WP_001183147.1;Name=WP_001183147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001182130.1;locus_tag=AB25_RS06605;product=hypothetical protein;protein_id=WP_001183147.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 137140 137850 . - . ID=gene-AB25_RS06600;Name=AB25_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS06600;old_locus_tag=AB25_3935 NZ_JJMC01000058.1 Protein Homology CDS 137140 137850 . - 0 ID=cds-WP_000424560.1;Parent=gene-AB25_RS06600;Dbxref=GenBank:WP_000424560.1;Name=WP_000424560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000424214.1;locus_tag=AB25_RS06600;product=hypothetical protein;protein_id=WP_000424560.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 137865 139373 . - . ID=gene-AB25_RS06595;Name=AB25_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS06595;old_locus_tag=AB25_3936 NZ_JJMC01000058.1 Protein Homology CDS 137865 139373 . - 0 ID=cds-WP_122633146.1;Parent=gene-AB25_RS06595;Dbxref=GenBank:WP_122633146.1;Name=WP_122633146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001349717.1;locus_tag=AB25_RS06595;product=PstS family phosphate ABC transporter substrate-binding protein;protein_id=WP_122633146.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 139498 141945 . - . ID=gene-AB25_RS06590;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=AB25_RS06590;old_locus_tag=AB25_3937 NZ_JJMC01000058.1 Protein Homology CDS 139498 141945 . - 0 ID=cds-WP_000993449.1;Parent=gene-AB25_RS06590;Dbxref=GenBank:WP_000993449.1;Name=WP_000993449.1;Ontology_term=GO:0005975,GO:0008184;gbkey=CDS;gene=glgP;go_function=glycogen phosphorylase activity|0008184||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417886.1;locus_tag=AB25_RS06590;product=glycogen phosphorylase;protein_id=WP_000993449.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 141964 143397 . - . ID=gene-AB25_RS06585;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=AB25_RS06585;old_locus_tag=AB25_3938 NZ_JJMC01000058.1 Protein Homology CDS 141964 143397 . - 0 ID=cds-WP_001197646.1;Parent=gene-AB25_RS06585;Dbxref=GenBank:WP_001197646.1;Name=WP_001197646.1;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=alpha-1%2C4-glucan glucosyltransferase (UDP-glucose donor) activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312301.1;locus_tag=AB25_RS06585;product=glycogen synthase GlgA;protein_id=WP_001197646.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 143397 144692 . - . ID=gene-AB25_RS06580;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=AB25_RS06580;old_locus_tag=AB25_3939 NZ_JJMC01000058.1 Protein Homology CDS 143397 144692 . - 0 ID=cds-WP_000253975.1;Parent=gene-AB25_RS06580;Dbxref=GenBank:WP_000253975.1;Name=WP_000253975.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312302.1;locus_tag=AB25_RS06580;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_000253975.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 144710 146683 . - . ID=gene-AB25_RS06575;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=AB25_RS06575;old_locus_tag=AB25_3940 NZ_JJMC01000058.1 Protein Homology CDS 144710 146683 . - 0 ID=cds-WP_000192552.1;Parent=gene-AB25_RS06575;Dbxref=GenBank:WP_000192552.1;Name=WP_000192552.1;Ontology_term=GO:0005980,GO:0120549;gbkey=CDS;gene=glgX;go_function=limit dextrin alpha-1%2C6-maltotetraose-hydrolase activity|0120549||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417889.1;locus_tag=AB25_RS06575;product=glycogen debranching protein GlgX;protein_id=WP_000192552.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 146680 148866 . - . ID=gene-AB25_RS06570;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=AB25_RS06570;old_locus_tag=AB25_3941 NZ_JJMC01000058.1 Protein Homology CDS 146680 148866 . - 0 ID=cds-WP_032171331.1;Parent=gene-AB25_RS06570;Dbxref=GenBank:WP_032171331.1;Name=WP_032171331.1;Ontology_term=GO:0005978,GO:0003844;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417890.1;locus_tag=AB25_RS06570;product=1%2C4-alpha-glucan branching enzyme;protein_id=WP_032171331.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 149139 150242 . - . ID=gene-AB25_RS06565;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=AB25_RS06565;old_locus_tag=AB25_3942 NZ_JJMC01000058.1 Protein Homology CDS 149139 150242 . - 0 ID=cds-WP_000799956.1;Parent=gene-AB25_RS06565;Dbxref=GenBank:WP_000799956.1;Name=WP_000799956.1;Ontology_term=GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0004073,GO:0050661;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,NADP binding|0050661||IEA;go_process=methionine biosynthetic process|0009086||IEA,threonine biosynthetic process|0009088||IEA,lysine biosynthetic process via diaminopimelate|0009089||IEA,isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312305.1;locus_tag=AB25_RS06565;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_000799956.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 150435 151028 . + . ID=gene-AB25_RS06560;Name=yhgN;gbkey=Gene;gene=yhgN;gene_biotype=protein_coding;locus_tag=AB25_RS06560;old_locus_tag=AB25_3943 NZ_JJMC01000058.1 Protein Homology CDS 150435 151028 . + 0 ID=cds-WP_001002544.1;Parent=gene-AB25_RS06560;Dbxref=GenBank:WP_001002544.1;Name=WP_001002544.1;gbkey=CDS;gene=yhgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312306.1;locus_tag=AB25_RS06560;product=NAAT family transporter YhgN;protein_id=WP_001002544.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 151085 152425 . - . ID=gene-AB25_RS06555;Name=gntU;gbkey=Gene;gene=gntU;gene_biotype=protein_coding;locus_tag=AB25_RS06555;old_locus_tag=AB25_3944 NZ_JJMC01000058.1 Protein Homology CDS 151085 152425 . - 0 ID=cds-WP_000210097.1;Parent=gene-AB25_RS06555;Dbxref=GenBank:WP_000210097.1;Name=WP_000210097.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=gntU;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312312.1;locus_tag=AB25_RS06555;product=gluconate transporter;protein_id=WP_000210097.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 152429 152956 . - . ID=gene-AB25_RS06550;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=AB25_RS06550;old_locus_tag=AB25_3945 NZ_JJMC01000058.1 Protein Homology CDS 152429 152956 . - 0 ID=cds-WP_000108330.1;Parent=gene-AB25_RS06550;Dbxref=GenBank:WP_000108330.1;Name=WP_000108330.1;gbkey=CDS;gene=gntK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417894.2;locus_tag=AB25_RS06550;product=gluconokinase;protein_id=WP_000108330.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 153095 154090 . - . ID=gene-AB25_RS06545;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=AB25_RS06545;old_locus_tag=AB25_3946 NZ_JJMC01000058.1 Protein Homology CDS 153095 154090 . - 0 ID=cds-WP_032246257.1;Parent=gene-AB25_RS06545;Dbxref=GenBank:WP_032246257.1;Name=WP_032246257.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=gntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001693277.1;locus_tag=AB25_RS06545;product=gluconate operon transcriptional repressor GntR;protein_id=WP_032246257.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 154314 155009 . - . ID=gene-AB25_RS06540;Name=yhhW;gbkey=Gene;gene=yhhW;gene_biotype=protein_coding;locus_tag=AB25_RS06540;old_locus_tag=AB25_3948 NZ_JJMC01000058.1 Protein Homology CDS 154314 155009 . - 0 ID=cds-WP_000639066.1;Parent=gene-AB25_RS06540;Dbxref=GenBank:WP_000639066.1;Name=WP_000639066.1;gbkey=CDS;gene=yhhW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213399.1;locus_tag=AB25_RS06540;product=quercetin 2%2C3-dioxygenase;protein_id=WP_000639066.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 155132 156169 . - . ID=gene-AB25_RS06535;Name=yhhX;gbkey=Gene;gene=yhhX;gene_biotype=protein_coding;locus_tag=AB25_RS06535;old_locus_tag=AB25_3949 NZ_JJMC01000058.1 Protein Homology CDS 155132 156169 . - 0 ID=cds-WP_000236319.1;Parent=gene-AB25_RS06535;Dbxref=GenBank:WP_000236319.1;Name=WP_000236319.1;Ontology_term=GO:0000166;gbkey=CDS;gene=yhhX;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417897.1;locus_tag=AB25_RS06535;product=oxidoreductase;protein_id=WP_000236319.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 156502 156990 . + . ID=gene-AB25_RS06530;Name=yhhY;gbkey=Gene;gene=yhhY;gene_biotype=protein_coding;locus_tag=AB25_RS06530;old_locus_tag=AB25_3950 NZ_JJMC01000058.1 Protein Homology CDS 156502 156990 . + 0 ID=cds-WP_001356219.1;Parent=gene-AB25_RS06530;Dbxref=GenBank:WP_001356219.1;Name=WP_001356219.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yhhY;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417898.1;locus_tag=AB25_RS06530;product=N-acetyltransferase;protein_id=WP_001356219.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 157100 157384 . + . ID=gene-AB25_RS06525;Name=yrhB;gbkey=Gene;gene=yrhB;gene_biotype=protein_coding;locus_tag=AB25_RS06525;old_locus_tag=AB25_3951 NZ_JJMC01000058.1 Protein Homology CDS 157100 157384 . + 0 ID=cds-WP_000973807.1;Parent=gene-AB25_RS06525;Dbxref=GenBank:WP_000973807.1;Name=WP_000973807.1;gbkey=CDS;gene=yrhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417903.1;locus_tag=AB25_RS06525;product=YrhB family protein;protein_id=WP_000973807.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 157422 159155 . - . ID=gene-AB25_RS06520;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=AB25_RS06520;old_locus_tag=AB25_3952 NZ_JJMC01000058.1 Protein Homology CDS 157422 159155 . - 0 ID=cds-WP_000595111.1;Parent=gene-AB25_RS06520;Dbxref=GenBank:WP_000595111.1;Name=WP_000595111.1;Ontology_term=GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417904.1;locus_tag=AB25_RS06520;product=gamma-glutamyltransferase;protein_id=WP_000595111.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 159276 159716 . + . ID=gene-AB25_RS06515;Name=yhhA;gbkey=Gene;gene=yhhA;gene_biotype=protein_coding;locus_tag=AB25_RS06515;old_locus_tag=AB25_3954 NZ_JJMC01000058.1 Protein Homology CDS 159276 159716 . + 0 ID=cds-WP_000825996.1;Parent=gene-AB25_RS06515;Dbxref=GenBank:WP_000825996.1;Name=WP_000825996.1;gbkey=CDS;gene=yhhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417905.1;locus_tag=AB25_RS06515;product=DUF2756 family protein;protein_id=WP_000825996.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 159703 160446 . - . ID=gene-AB25_RS06510;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=AB25_RS06510;old_locus_tag=AB25_3955 NZ_JJMC01000058.1 Protein Homology CDS 159703 160446 . - 0 ID=cds-WP_032171334.1;Parent=gene-AB25_RS06510;Dbxref=GenBank:WP_032171334.1;Name=WP_032171334.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=ugpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709219.1;locus_tag=AB25_RS06510;product=glycerophosphodiester phosphodiesterase;protein_id=WP_032171334.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 160443 161513 . - . ID=gene-AB25_RS06505;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=AB25_RS06505;old_locus_tag=AB25_3956 NZ_JJMC01000058.1 Protein Homology CDS 160443 161513 . - 0 ID=cds-WP_000907798.1;Parent=gene-AB25_RS06505;Dbxref=GenBank:WP_000907798.1;Name=WP_000907798.1;gbkey=CDS;gene=ugpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417907.2;locus_tag=AB25_RS06505;product=sn-glycerol 3-phosphate ABC transporter ATP binding protein UgpC;protein_id=WP_000907798.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 161515 162360 . - . ID=gene-AB25_RS06500;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=AB25_RS06500;old_locus_tag=AB25_3957 NZ_JJMC01000058.1 Protein Homology CDS 161515 162360 . - 0 ID=cds-WP_000572176.1;Parent=gene-AB25_RS06500;Dbxref=GenBank:WP_000572176.1;Name=WP_000572176.1;Ontology_term=GO:0015794,GO:0005886,GO:0055052;gbkey=CDS;gene=ugpE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572177.1;locus_tag=AB25_RS06500;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=WP_000572176.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 162357 163244 . - . ID=gene-AB25_RS06495;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=AB25_RS06495;old_locus_tag=AB25_3958 NZ_JJMC01000058.1 Protein Homology CDS 162357 163244 . - 0 ID=cds-WP_000099272.1;Parent=gene-AB25_RS06495;Dbxref=GenBank:WP_000099272.1;Name=WP_000099272.1;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099274.1;locus_tag=AB25_RS06495;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=WP_000099272.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 163342 164658 . - . ID=gene-AB25_RS06490;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=AB25_RS06490;old_locus_tag=AB25_3959 NZ_JJMC01000058.1 Protein Homology CDS 163342 164658 . - 0 ID=cds-WP_032171336.1;Parent=gene-AB25_RS06490;Dbxref=GenBank:WP_032171336.1;Name=WP_032171336.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ugpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312326.1;locus_tag=AB25_RS06490;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=WP_032171336.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 165055 165768 . - . ID=gene-AB25_RS06485;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=AB25_RS06485;old_locus_tag=AB25_3960 NZ_JJMC01000058.1 Protein Homology CDS 165055 165768 . - 0 ID=cds-WP_000416895.1;Parent=gene-AB25_RS06485;Dbxref=GenBank:WP_000416895.1;Name=WP_000416895.1;gbkey=CDS;gene=livF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312328.2;locus_tag=AB25_RS06485;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF;protein_id=WP_000416895.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 165770 166537 . - . ID=gene-AB25_RS06480;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=AB25_RS06480;old_locus_tag=AB25_3961 NZ_JJMC01000058.1 Protein Homology CDS 165770 166537 . - 0 ID=cds-WP_000082101.1;Parent=gene-AB25_RS06480;Dbxref=GenBank:WP_000082101.1;Name=WP_000082101.1;gbkey=CDS;gene=livG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084170.1;locus_tag=AB25_RS06480;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=WP_000082101.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 166534 167811 . - . ID=gene-AB25_RS06475;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=AB25_RS06475;old_locus_tag=AB25_3962 NZ_JJMC01000058.1 Protein Homology CDS 166534 167811 . - 0 ID=cds-WP_000803799.1;Parent=gene-AB25_RS06475;Dbxref=GenBank:WP_000803799.1;Name=WP_000803799.1;gbkey=CDS;gene=livM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312330.1;locus_tag=AB25_RS06475;product=branched chain amino acid ABC transporter permease LivM;protein_id=WP_000803799.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 167808 168734 . - . ID=gene-AB25_RS06470;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=AB25_RS06470;old_locus_tag=AB25_3963 NZ_JJMC01000058.1 Protein Homology CDS 167808 168734 . - 0 ID=cds-WP_000003004.1;Parent=gene-AB25_RS06470;Dbxref=GenBank:WP_000003004.1;Name=WP_000003004.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=livH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1;locus_tag=AB25_RS06470;product=high-affinity branched-chain amino acid ABC transporter permease LivH;protein_id=WP_000003004.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 168782 169891 . - . ID=gene-AB25_RS06465;Name=livK;gbkey=Gene;gene=livK;gene_biotype=protein_coding;locus_tag=AB25_RS06465;old_locus_tag=AB25_3964 NZ_JJMC01000058.1 Protein Homology CDS 168782 169891 . - 0 ID=cds-WP_000827696.1;Parent=gene-AB25_RS06465;Dbxref=GenBank:WP_000827696.1;Name=WP_000827696.1;gbkey=CDS;gene=livK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417915.1;locus_tag=AB25_RS06465;product=high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK;protein_id=WP_000827696.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 170315 170698 . + . ID=gene-AB25_RS06460;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=AB25_RS06460;old_locus_tag=AB25_3966 NZ_JJMC01000058.1 Protein Homology CDS 170315 170698 . + 0 ID=cds-WP_000778781.1;Parent=gene-AB25_RS06460;Dbxref=GenBank:WP_000778781.1;Name=WP_000778781.1;Ontology_term=GO:0015940,GO:0031638,GO:0008080;gbkey=CDS;gene=panM;go_function=N-acetyltransferase activity|0008080||IEA;go_process=pantothenate biosynthetic process|0015940||IEA,zymogen activation|0031638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709229.1;locus_tag=AB25_RS06460;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=WP_000778781.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 170695 171222 . - . ID=gene-AB25_RS06455;Name=ataT;gbkey=Gene;gene=ataT;gene_biotype=protein_coding;locus_tag=AB25_RS06455;old_locus_tag=AB25_3967 NZ_JJMC01000058.1 Protein Homology CDS 170695 171222 . - 0 ID=cds-WP_000342449.1;Parent=gene-AB25_RS06455;Dbxref=GenBank:WP_000342449.1;Name=WP_000342449.1;gbkey=CDS;gene=ataT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312334.1;locus_tag=AB25_RS06455;product=type II toxin-antitoxin system toxin acetyltransferase AtaT;protein_id=WP_000342449.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 171229 171495 . - . ID=gene-AB25_RS06450;Name=ataR;gbkey=Gene;gene=ataR;gene_biotype=protein_coding;locus_tag=AB25_RS06450;old_locus_tag=AB25_3968 NZ_JJMC01000058.1 Protein Homology CDS 171229 171495 . - 0 ID=cds-WP_001392759.1;Parent=gene-AB25_RS06450;Dbxref=GenBank:WP_001392759.1;Name=WP_001392759.1;gbkey=CDS;gene=ataR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312335.1;locus_tag=AB25_RS06450;product=type II toxin-antitoxin system antitoxin AtaR;protein_id=WP_001392759.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 171645 172748 . - . ID=gene-AB25_RS06445;Name=livJ;gbkey=Gene;gene=livJ;gene_biotype=protein_coding;locus_tag=AB25_RS06445;old_locus_tag=AB25_3969 NZ_JJMC01000058.1 Protein Homology CDS 171645 172748 . - 0 ID=cds-WP_001350438.1;Parent=gene-AB25_RS06445;Dbxref=GenBank:WP_001350438.1;Name=WP_001350438.1;gbkey=CDS;gene=livJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026223.1;locus_tag=AB25_RS06445;product=branched chain amino acid ABC transporter substrate-binding protein LivJ;protein_id=WP_001350438.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 173020 173874 . - . ID=gene-AB25_RS06440;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=AB25_RS06440;old_locus_tag=AB25_3970 NZ_JJMC01000058.1 Protein Homology CDS 173020 173874 . - 0 ID=cds-WP_000130217.1;Parent=gene-AB25_RS06440;Dbxref=GenBank:WP_000130217.1;Name=WP_000130217.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoH;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312337.1;locus_tag=AB25_RS06440;product=RNA polymerase sigma factor RpoH;protein_id=WP_000130217.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 174119 175177 . - . ID=gene-AB25_RS06435;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=AB25_RS06435;old_locus_tag=AB25_3971 NZ_JJMC01000058.1 Protein Homology CDS 174119 175177 . - 0 ID=cds-WP_001042003.1;Parent=gene-AB25_RS06435;Dbxref=GenBank:WP_001042003.1;Name=WP_001042003.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417919.1;locus_tag=AB25_RS06435;product=permease-like cell division protein FtsX;protein_id=WP_001042003.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 175170 175838 . - . ID=gene-AB25_RS06430;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=AB25_RS06430;old_locus_tag=AB25_3972 NZ_JJMC01000058.1 Protein Homology CDS 175170 175838 . - 0 ID=cds-WP_000617723.1;Parent=gene-AB25_RS06430;Dbxref=GenBank:WP_000617723.1;Name=WP_000617723.1;Ontology_term=GO:0000910,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312339.1;locus_tag=AB25_RS06430;product=cell division ATP-binding protein FtsE;protein_id=WP_000617723.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 175841 177334 . - . ID=gene-AB25_RS06425;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=AB25_RS06425;old_locus_tag=AB25_3973 NZ_JJMC01000058.1 Protein Homology CDS 175841 177334 . - 0 ID=cds-WP_001040659.1;Parent=gene-AB25_RS06425;Dbxref=GenBank:WP_001040659.1;Name=WP_001040659.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312340.1;locus_tag=AB25_RS06425;product=signal recognition particle-docking protein FtsY;protein_id=WP_001040659.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 177484 178080 . + . ID=gene-AB25_RS06420;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=AB25_RS06420;old_locus_tag=AB25_3974 NZ_JJMC01000058.1 Protein Homology CDS 177484 178080 . + 0 ID=cds-WP_000743193.1;Parent=gene-AB25_RS06420;Dbxref=GenBank:WP_000743193.1;Name=WP_000743193.1;Ontology_term=GO:0031167,GO:0003676,GO:0008168;gbkey=CDS;gene=rsmD;go_function=nucleic acid binding|0003676||IEA,methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417922.1;locus_tag=AB25_RS06420;product=16S rRNA (guanine(966)-N(2))-methyltransferase;protein_id=WP_000743193.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 178070 178339 . + . ID=gene-AB25_RS06415;Name=yhhL;gbkey=Gene;gene=yhhL;gene_biotype=protein_coding;locus_tag=AB25_RS06415;old_locus_tag=AB25_3975 NZ_JJMC01000058.1 Protein Homology CDS 178070 178339 . + 0 ID=cds-WP_001295207.1;Parent=gene-AB25_RS06415;Dbxref=GenBank:WP_001295207.1;Name=WP_001295207.1;gbkey=CDS;gene=yhhL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312342.1;locus_tag=AB25_RS06415;product=DUF1145 family protein;protein_id=WP_001295207.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 178342 178701 . - . ID=gene-AB25_RS06410;Name=yhhM;gbkey=Gene;gene=yhhM;gene_biotype=protein_coding;locus_tag=AB25_RS06410;old_locus_tag=AB25_3976 NZ_JJMC01000058.1 Protein Homology CDS 178342 178701 . - 0 ID=cds-WP_000042900.1;Parent=gene-AB25_RS06410;Dbxref=GenBank:WP_000042900.1;Name=WP_000042900.1;gbkey=CDS;gene=yhhM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709237.1;locus_tag=AB25_RS06410;product=DUF2500 domain-containing protein;protein_id=WP_000042900.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 178842 179468 . + . ID=gene-AB25_RS06405;Name=yhhN;gbkey=Gene;gene=yhhN;gene_biotype=protein_coding;locus_tag=AB25_RS06405;old_locus_tag=AB25_3977 NZ_JJMC01000058.1 Protein Homology CDS 178842 179468 . + 0 ID=cds-WP_000964718.1;Parent=gene-AB25_RS06405;Dbxref=GenBank:WP_000964718.1;Name=WP_000964718.1;gbkey=CDS;gene=yhhN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312344.1;locus_tag=AB25_RS06405;product=lysoplasmalogenase;protein_id=WP_000964718.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 179542 181740 . + . ID=gene-AB25_RS06400;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=AB25_RS06400;old_locus_tag=AB25_3978 NZ_JJMC01000058.1 Protein Homology CDS 179542 181740 . + 0 ID=cds-WP_000106527.1;Parent=gene-AB25_RS06400;Dbxref=GenBank:WP_000106527.1;Name=WP_000106527.1;Ontology_term=GO:0006812,GO:0005215,GO:0005524,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;gene=zntA;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709239.1;locus_tag=AB25_RS06400;product=Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA;protein_id=WP_000106527.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 181842 182087 . - . ID=gene-AB25_RS06395;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=AB25_RS06395;old_locus_tag=AB25_3979 NZ_JJMC01000058.1 Protein Homology CDS 181842 182087 . - 0 ID=cds-WP_000130621.1;Parent=gene-AB25_RS06395;Dbxref=GenBank:WP_000130621.1;Name=WP_000130621.1;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312346.1;locus_tag=AB25_RS06395;product=sulfurtransferase TusA;protein_id=WP_000130621.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 182308 182973 . + . ID=gene-AB25_RS06390;Name=yhhQ;gbkey=Gene;gene=yhhQ;gene_biotype=protein_coding;locus_tag=AB25_RS06390;old_locus_tag=AB25_3980 NZ_JJMC01000058.1 Protein Homology CDS 182308 182973 . + 0 ID=cds-WP_001100475.1;Parent=gene-AB25_RS06390;Dbxref=GenBank:WP_001100475.1;Name=WP_001100475.1;Ontology_term=GO:1990397;gbkey=CDS;gene=yhhQ;go_process=queuosine salvage|1990397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312347.1;locus_tag=AB25_RS06390;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=WP_001100475.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 183046 183603 . + . ID=gene-AB25_RS06385;Name=dcrB;gbkey=Gene;gene=dcrB;gene_biotype=protein_coding;locus_tag=AB25_RS06385;old_locus_tag=AB25_3981 NZ_JJMC01000058.1 Protein Homology CDS 183046 183603 . + 0 ID=cds-WP_001245295.1;Parent=gene-AB25_RS06385;Dbxref=GenBank:WP_001245295.1;Name=WP_001245295.1;gbkey=CDS;gene=dcrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417929.4;locus_tag=AB25_RS06385;product=phage sensitivity protein DcrB;protein_id=WP_001245295.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 183607 184824 . - . ID=gene-AB25_RS06380;Name=yhhS;gbkey=Gene;gene=yhhS;gene_biotype=protein_coding;locus_tag=AB25_RS06380;old_locus_tag=AB25_3982 NZ_JJMC01000058.1 Protein Homology CDS 183607 184824 . - 0 ID=cds-WP_032178125.1;Parent=gene-AB25_RS06380;Dbxref=GenBank:WP_032178125.1;Name=WP_032178125.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=yhhS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417930.2;locus_tag=AB25_RS06380;product=MFS transporter;protein_id=WP_032178125.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 184956 186005 . + . ID=gene-AB25_RS06375;Name=yhhT;gbkey=Gene;gene=yhhT;gene_biotype=protein_coding;locus_tag=AB25_RS06375;old_locus_tag=AB25_3983 NZ_JJMC01000058.1 Protein Homology CDS 184956 186005 . + 0 ID=cds-WP_001297848.1;Parent=gene-AB25_RS06375;Dbxref=GenBank:WP_001297848.1;Name=WP_001297848.1;gbkey=CDS;gene=yhhT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312350.2;locus_tag=AB25_RS06375;product=AI-2E family transporter;protein_id=WP_001297848.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 186060 186647 . + . ID=gene-AB25_RS06370;Name=acpT;gbkey=Gene;gene=acpT;gene_biotype=protein_coding;locus_tag=AB25_RS06370;old_locus_tag=AB25_3984 NZ_JJMC01000058.1 Protein Homology CDS 186060 186647 . + 0 ID=cds-WP_000285784.1;Parent=gene-AB25_RS06370;Dbxref=GenBank:WP_000285784.1;Name=WP_000285784.1;gbkey=CDS;gene=acpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312369.1;locus_tag=AB25_RS06370;product=4'-phosphopantetheinyl transferase AcpT;protein_id=WP_000285784.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 186758 188332 . + . ID=gene-AB25_RS06365;Name=nikA;gbkey=Gene;gene=nikA;gene_biotype=protein_coding;locus_tag=AB25_RS06365;old_locus_tag=AB25_3985 NZ_JJMC01000058.1 Protein Homology CDS 186758 188332 . + 0 ID=cds-WP_000953356.1;Parent=gene-AB25_RS06365;Dbxref=GenBank:WP_000953356.1;Name=WP_000953356.1;Ontology_term=GO:0015675,GO:0015413,GO:0016151,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=nikA;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type nickel transporter activity|0015413||IEA,nickel cation binding|0016151||IEA;go_process=nickel cation transport|0015675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709246.1;locus_tag=AB25_RS06365;product=nickel ABC transporter substrate-binding protein;protein_id=WP_000953356.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 188332 189276 . + . ID=gene-AB25_RS06360;Name=nikB;gbkey=Gene;gene=nikB;gene_biotype=protein_coding;locus_tag=AB25_RS06360;old_locus_tag=AB25_3986 NZ_JJMC01000058.1 Protein Homology CDS 188332 189276 . + 0 ID=cds-WP_000947068.1;Parent=gene-AB25_RS06360;Dbxref=GenBank:WP_000947068.1;Name=WP_000947068.1;gbkey=CDS;gene=nikB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417934.1;locus_tag=AB25_RS06360;product=nickel ABC transporter permease subunit NikB;protein_id=WP_000947068.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 189273 190106 . + . ID=gene-AB25_RS06355;Name=nikC;gbkey=Gene;gene=nikC;gene_biotype=protein_coding;locus_tag=AB25_RS06355;old_locus_tag=AB25_3987 NZ_JJMC01000058.1 Protein Homology CDS 189273 190106 . + 0 ID=cds-WP_001008963.1;Parent=gene-AB25_RS06355;Dbxref=GenBank:WP_001008963.1;Name=WP_001008963.1;Ontology_term=GO:0055085,GO:0015099,GO:0016020;gbkey=CDS;gene=nikC;go_component=membrane|0016020||IEA;go_function=nickel cation transmembrane transporter activity|0015099||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312372.1;locus_tag=AB25_RS06355;product=nickel ABC transporter permease subunit NikC;protein_id=WP_001008963.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 190106 190870 . + . ID=gene-AB25_RS06350;Name=nikD;gbkey=Gene;gene=nikD;gene_biotype=protein_coding;locus_tag=AB25_RS06350;old_locus_tag=AB25_3988 NZ_JJMC01000058.1 Protein Homology CDS 190106 190870 . + 0 ID=cds-WP_001136236.1;Parent=gene-AB25_RS06350;Dbxref=GenBank:WP_001136236.1;Name=WP_001136236.1;Ontology_term=GO:0015675,GO:0015413,GO:0016151,GO:0005886,GO:0043190;gbkey=CDS;gene=nikD;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type nickel transporter activity|0015413||IEA,nickel cation binding|0016151||IEA;go_process=nickel cation transport|0015675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417936.1;locus_tag=AB25_RS06350;product=nickel import ATP-binding protein NikD;protein_id=WP_001136236.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 190867 191673 . + . ID=gene-AB25_RS06345;Name=nikE;gbkey=Gene;gene=nikE;gene_biotype=protein_coding;locus_tag=AB25_RS06345;old_locus_tag=AB25_3989 NZ_JJMC01000058.1 Protein Homology CDS 190867 191673 . + 0 ID=cds-WP_000173666.1;Parent=gene-AB25_RS06345;Dbxref=GenBank:WP_000173666.1;Name=WP_000173666.1;Ontology_term=GO:0015675,GO:0005524,GO:0015413,GO:0005886,GO:0043190;gbkey=CDS;gene=nikE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type nickel transporter activity|0015413||IEA;go_process=nickel cation transport|0015675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417937.1;locus_tag=AB25_RS06345;product=nickel import ATP-binding protein NikE;protein_id=WP_000173666.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 191679 192080 . + . ID=gene-AB25_RS06340;Name=nikR;gbkey=Gene;gene=nikR;gene_biotype=protein_coding;locus_tag=AB25_RS06340;old_locus_tag=AB25_3990 NZ_JJMC01000058.1 Protein Homology CDS 191679 192080 . + 0 ID=cds-WP_001190062.1;Parent=gene-AB25_RS06340;Dbxref=GenBank:WP_001190062.1;Name=WP_001190062.1;Ontology_term=GO:0006355,GO:0010045,GO:0003677,GO:0016151;gbkey=CDS;gene=nikR;go_function=DNA binding|0003677||IEA,nickel cation binding|0016151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to nickel cation|0010045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312375.1;locus_tag=AB25_RS06340;product=nickel-responsive transcriptional regulator NikR;protein_id=WP_001190062.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 192200 192559 . - . ID=gene-AB25_RS06335;Name=AB25_RS06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS06335;old_locus_tag=AB25_3991 NZ_JJMC01000058.1 Protein Homology CDS 192200 192559 . - 0 ID=cds-WP_000593555.1;Parent=gene-AB25_RS06335;Dbxref=GenBank:WP_000593555.1;Name=WP_000593555.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312383.1;locus_tag=AB25_RS06335;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=WP_000593555.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 192556 192786 . - . ID=gene-AB25_RS0126170;Name=AB25_RS0126170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0126170 NZ_JJMC01000058.1 Protein Homology CDS 192556 192786 . - 0 ID=cds-WP_042014162.1;Parent=gene-AB25_RS0126170;Dbxref=GenBank:WP_042014162.1;Name=WP_042014162.1;Ontology_term=GO:0003729;gbkey=CDS;go_function=mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012989200.1;locus_tag=AB25_RS0126170;product=type II toxin-antitoxin system HicA family toxin;protein_id=WP_042014162.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 192890 194014 . - . ID=gene-AB25_RS06330;Name=yhhJ;gbkey=Gene;gene=yhhJ;gene_biotype=protein_coding;locus_tag=AB25_RS06330;old_locus_tag=AB25_3992 NZ_JJMC01000058.1 Protein Homology CDS 192890 194014 . - 0 ID=cds-WP_001314210.1;Parent=gene-AB25_RS06330;Dbxref=GenBank:WP_001314210.1;Name=WP_001314210.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;gene=yhhJ;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709253.2;locus_tag=AB25_RS06330;product=ABC transporter permease;protein_id=WP_001314210.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 194014 196749 . - . ID=gene-AB25_RS06325;Name=rbbA;gbkey=Gene;gene=rbbA;gene_biotype=protein_coding;locus_tag=AB25_RS06325;old_locus_tag=AB25_3993 NZ_JJMC01000058.1 Protein Homology CDS 194014 196749 . - 0 ID=cds-WP_000149132.1;Parent=gene-AB25_RS06325;Dbxref=GenBank:WP_000149132.1;Name=WP_000149132.1;gbkey=CDS;gene=rbbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709254.1;locus_tag=AB25_RS06325;product=ribosome-associated ATPase/putative transporter RbbA;protein_id=WP_000149132.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 196746 197813 . - . ID=gene-AB25_RS06320;Name=yhiI;gbkey=Gene;gene=yhiI;gene_biotype=protein_coding;locus_tag=AB25_RS06320;old_locus_tag=AB25_3994 NZ_JJMC01000058.1 Protein Homology CDS 196746 197813 . - 0 ID=cds-WP_000361485.1;Parent=gene-AB25_RS06320;Dbxref=GenBank:WP_000361485.1;Name=WP_000361485.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yhiI;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312387.1;locus_tag=AB25_RS06320;product=HlyD family secretion protein;protein_id=WP_000361485.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 197876 197989 . - . ID=gene-AB25_RS32305;Name=yhiY;gbkey=Gene;gene=yhiY;gene_biotype=protein_coding;locus_tag=AB25_RS32305;old_locus_tag=AB25_3995 NZ_JJMC01000058.1 Protein Homology CDS 197876 197989 . - 0 ID=cds-WP_001296785.1;Parent=gene-AB25_RS32305;Dbxref=GenBank:WP_001296785.1;Name=WP_001296785.1;gbkey=CDS;gene=yhiY;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051203.1;locus_tag=AB25_RS32305;product=protein YhiY;protein_id=WP_001296785.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 198179 199801 . - . ID=gene-AB25_RS06315;Name=yhiJ;gbkey=Gene;gene=yhiJ;gene_biotype=protein_coding;locus_tag=AB25_RS06315;old_locus_tag=AB25_3996 NZ_JJMC01000058.1 Protein Homology CDS 198179 199801 . - 0 ID=cds-WP_001307442.1;Parent=gene-AB25_RS06315;Dbxref=GenBank:WP_001307442.1;Name=WP_001307442.1;gbkey=CDS;gene=yhiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417945.1;locus_tag=AB25_RS06315;product=DUF4049 domain-containing protein;protein_id=WP_001307442.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 200063 201652 . - . ID=gene-AB25_RS06310;Name=AB25_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS06310;old_locus_tag=AB25_3997 NZ_JJMC01000058.1 Protein Homology CDS 200063 201652 . - 0 ID=cds-WP_000862320.1;Parent=gene-AB25_RS06310;Dbxref=GenBank:WP_000862320.1;Name=WP_000862320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312389.1;locus_tag=AB25_RS06310;product=DUF4049 domain-containing protein;protein_id=WP_000862320.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 202036 203088 . + . ID=gene-AB25_RS06305;Name=yhiM;gbkey=Gene;gene=yhiM;gene_biotype=protein_coding;locus_tag=AB25_RS06305;old_locus_tag=AB25_4000 NZ_JJMC01000058.1 Protein Homology CDS 202036 203088 . + 0 ID=cds-WP_001028905.1;Parent=gene-AB25_RS06305;Dbxref=GenBank:WP_001028905.1;Name=WP_001028905.1;gbkey=CDS;gene=yhiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417948.4;locus_tag=AB25_RS06305;product=DUF2776 domain-containing protein;protein_id=WP_001028905.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 203403 204605 . - . ID=gene-AB25_RS06300;Name=yhiN;gbkey=Gene;gene=yhiN;gene_biotype=protein_coding;locus_tag=AB25_RS06300;old_locus_tag=AB25_4001 NZ_JJMC01000058.1 Protein Homology CDS 203403 204605 . - 0 ID=cds-WP_032171341.1;Parent=gene-AB25_RS06300;Dbxref=GenBank:WP_032171341.1;Name=WP_032171341.1;Ontology_term=GO:0050660,GO:0050661;gbkey=CDS;gene=yhiN;go_function=flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417949.1;locus_tag=AB25_RS06300;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_032171341.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 204837 206336 . + . ID=gene-AB25_RS06295;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=AB25_RS06295;old_locus_tag=AB25_4002 NZ_JJMC01000058.1 Protein Homology CDS 204837 206336 . + 0 ID=cds-WP_000902780.1;Parent=gene-AB25_RS06295;Dbxref=GenBank:WP_000902780.1;Name=WP_000902780.1;Ontology_term=GO:0006817,GO:0016020;gbkey=CDS;gene=pitA;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312392.1;locus_tag=AB25_RS06295;product=inorganic phosphate transporter PitA;protein_id=WP_000902780.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 206407 206742 . - . ID=gene-AB25_RS0126185;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=AB25_RS0126185;old_locus_tag=AB25_4003 NZ_JJMC01000058.1 Protein Homology CDS 206407 206742 . - 0 ID=cds-WP_000626187.1;Parent=gene-AB25_RS0126185;Dbxref=GenBank:WP_000626187.1;Name=WP_000626187.1;gbkey=CDS;gene=uspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312393.1;locus_tag=AB25_RS0126185;product=universal stress protein UspB;protein_id=WP_000626187.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 207133 207567 . + . ID=gene-AB25_RS06290;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=AB25_RS06290;old_locus_tag=AB25_4004 NZ_JJMC01000058.1 Protein Homology CDS 207133 207567 . + 0 ID=cds-WP_000323571.1;Parent=gene-AB25_RS06290;Dbxref=GenBank:WP_000323571.1;Name=WP_000323571.1;gbkey=CDS;gene=uspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312394.1;locus_tag=AB25_RS06290;product=universal stress protein UspA;protein_id=WP_000323571.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 207666 207719 . - . ID=gene-AB25_RS32310;Name=AB25_RS32310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32310 NZ_JJMC01000058.1 Protein Homology CDS 207666 207719 . - 0 ID=cds-WP_212591402.1;Parent=gene-AB25_RS32310;Dbxref=GenBank:WP_212591402.1;Name=WP_212591402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051205.1;locus_tag=AB25_RS32310;product=hypothetical protein;protein_id=WP_212591402.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 207885 209354 . + . ID=gene-AB25_RS06285;Name=dtpB;gbkey=Gene;gene=dtpB;gene_biotype=protein_coding;locus_tag=AB25_RS06285;old_locus_tag=AB25_4005 NZ_JJMC01000058.1 Protein Homology CDS 207885 209354 . + 0 ID=cds-WP_032296140.1;Parent=gene-AB25_RS06285;Dbxref=GenBank:WP_032296140.1;Name=WP_032296140.1;gbkey=CDS;gene=dtpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417953.1;locus_tag=AB25_RS06285;product=dipeptide/tripeptide permease DtpB;protein_id=WP_032296140.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 209403 210155 . - . ID=gene-AB25_RS06280;Name=rsmJ;gbkey=Gene;gene=rsmJ;gene_biotype=protein_coding;locus_tag=AB25_RS06280;old_locus_tag=AB25_4006 NZ_JJMC01000058.1 Protein Homology CDS 209403 210155 . - 0 ID=cds-WP_000686608.1;Parent=gene-AB25_RS06280;Dbxref=GenBank:WP_000686608.1;Name=WP_000686608.1;Ontology_term=GO:0031167,GO:0008990;gbkey=CDS;gene=rsmJ;go_function=rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709277.2;locus_tag=AB25_RS06280;product=16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ;protein_id=WP_000686608.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 210163 212205 . - . ID=gene-AB25_RS06275;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=protein_coding;locus_tag=AB25_RS06275;old_locus_tag=AB25_4007 NZ_JJMC01000058.1 Protein Homology CDS 210163 212205 . - 0 ID=cds-WP_001295214.1;Parent=gene-AB25_RS06275;Dbxref=GenBank:WP_001295214.1;Name=WP_001295214.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=prlC;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020317218.1;locus_tag=AB25_RS06275;product=oligopeptidase A;protein_id=WP_001295214.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 212408 213250 . + . ID=gene-AB25_RS06270;Name=rlmJ;gbkey=Gene;gene=rlmJ;gene_biotype=protein_coding;locus_tag=AB25_RS06270;old_locus_tag=AB25_4008 NZ_JJMC01000058.1 Protein Homology CDS 212408 213250 . + 0 ID=cds-WP_000954225.1;Parent=gene-AB25_RS06270;Dbxref=GenBank:WP_000954225.1;Name=WP_000954225.1;gbkey=CDS;gene=rlmJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312398.1;locus_tag=AB25_RS06270;product=23S rRNA (adenine(2030)-N(6))-methyltransferase;protein_id=WP_000954225.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 213322 214674 . + . ID=gene-AB25_RS06265;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=AB25_RS06265;old_locus_tag=AB25_4009 NZ_JJMC01000058.1 Protein Homology CDS 213322 214674 . + 0 ID=cds-WP_000160808.1;Parent=gene-AB25_RS06265;Dbxref=GenBank:WP_000160808.1;Name=WP_000160808.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=AB25_RS06265;product=glutathione-disulfide reductase;protein_id=WP_000160808.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 214728 214811 . - . ID=gene-AB25_RS06260;Name=dinQ;gbkey=Gene;gene=dinQ;gene_biotype=protein_coding;locus_tag=AB25_RS06260;old_locus_tag=AB25_4010 NZ_JJMC01000058.1 Protein Homology CDS 214728 214811 . - 0 ID=cds-WP_001295215.1;Parent=gene-AB25_RS06260;Dbxref=GenBank:WP_001295215.1;Name=WP_001295215.1;gbkey=CDS;gene=dinQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165328.2;locus_tag=AB25_RS06260;product=damage-inducible type I toxin DinQ;protein_id=WP_001295215.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 215782 216135 . + . ID=gene-AB25_RS06250;Name=arsR;gbkey=Gene;gene=arsR;gene_biotype=protein_coding;locus_tag=AB25_RS06250;old_locus_tag=AB25_4012 NZ_JJMC01000058.1 Protein Homology CDS 215782 216135 . + 0 ID=cds-WP_000008957.1;Parent=gene-AB25_RS06250;Dbxref=GenBank:WP_000008957.1;Name=WP_000008957.1;gbkey=CDS;gene=arsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417958.1;locus_tag=AB25_RS06250;product=As(III)-sensing metalloregulatory transcriptional repressor ArsR;protein_id=WP_000008957.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 216189 217478 . + . ID=gene-AB25_RS06245;Name=arsB;gbkey=Gene;gene=arsB;gene_biotype=protein_coding;locus_tag=AB25_RS06245;old_locus_tag=AB25_4013 NZ_JJMC01000058.1 Protein Homology CDS 216189 217478 . + 0 ID=cds-WP_001324556.1;Parent=gene-AB25_RS06245;Dbxref=GenBank:WP_001324556.1;Name=WP_001324556.1;gbkey=CDS;gene=arsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312401.1;locus_tag=AB25_RS06245;product=arsenite/antimonite:H(+) antiporter ArsB;protein_id=WP_001324556.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 217491 217916 . + . ID=gene-AB25_RS06240;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=AB25_RS06240;old_locus_tag=AB25_4014 NZ_JJMC01000058.1 Protein Homology CDS 217491 217916 . + 0 ID=cds-WP_000065777.1;Parent=gene-AB25_RS06240;Dbxref=GenBank:WP_000065777.1;Name=WP_000065777.1;Ontology_term=GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417960.1;locus_tag=AB25_RS06240;product=glutaredoxin-dependent arsenate reductase;protein_id=WP_000065777.1;transl_table=11 NZ_JJMC01000058.1 RefSeq pseudogene 218541 219656 . + . ID=gene-AB25_RS0126190;Name=AB25_RS0126190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS0126190;old_locus_tag=AB25_4015;pseudo=true NZ_JJMC01000058.1 Protein Homology CDS 218541 219656 . + 0 ID=cds-AB25_RS0126190;Parent=gene-AB25_RS0126190;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312403.1;locus_tag=AB25_RS0126190;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 220011 220577 . + . ID=gene-AB25_RS06235;Name=slp;gbkey=Gene;gene=slp;gene_biotype=protein_coding;locus_tag=AB25_RS06235;old_locus_tag=AB25_4016 NZ_JJMC01000058.1 Protein Homology CDS 220011 220577 . + 0 ID=cds-WP_001057453.1;Parent=gene-AB25_RS06235;Dbxref=GenBank:WP_001057453.1;Name=WP_001057453.1;gbkey=CDS;gene=slp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312404.2;locus_tag=AB25_RS06235;product=outer membrane lipoprotein Slp;protein_id=WP_001057453.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 220733 221263 . + . ID=gene-AB25_RS06230;Name=dctR;gbkey=Gene;gene=dctR;gene_biotype=protein_coding;locus_tag=AB25_RS06230;old_locus_tag=AB25_4017 NZ_JJMC01000058.1 Protein Homology CDS 220733 221263 . + 0 ID=cds-WP_000478621.1;Parent=gene-AB25_RS06230;Dbxref=GenBank:WP_000478621.1;Name=WP_000478621.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=dctR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312405.1;locus_tag=AB25_RS06230;product=helix-turn-helix transcriptional regulator;protein_id=WP_000478621.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 221305 221952 . - . ID=gene-AB25_RS06225;Name=yhiD;gbkey=Gene;gene=yhiD;gene_biotype=protein_coding;locus_tag=AB25_RS06225;old_locus_tag=AB25_4018 NZ_JJMC01000058.1 Protein Homology CDS 221305 221952 . - 0 ID=cds-WP_001296814.1;Parent=gene-AB25_RS06225;Dbxref=GenBank:WP_001296814.1;Name=WP_001296814.1;gbkey=CDS;gene=yhiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417965.1;locus_tag=AB25_RS06225;product=MgtC/SapB family protein;protein_id=WP_001296814.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 222016 222342 . - . ID=gene-AB25_RS06220;Name=hdeB;gbkey=Gene;gene=hdeB;gene_biotype=protein_coding;locus_tag=AB25_RS06220;old_locus_tag=AB25_4019 NZ_JJMC01000058.1 Protein Homology CDS 222016 222342 . - 0 ID=cds-WP_001298717.1;Parent=gene-AB25_RS06220;Dbxref=GenBank:WP_001298717.1;Name=WP_001298717.1;gbkey=CDS;gene=hdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417966.4;locus_tag=AB25_RS06220;product=acid-activated periplasmic chaperone HdeB;protein_id=WP_001298717.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 222458 222790 . - . ID=gene-AB25_RS06215;Name=hdeA;gbkey=Gene;gene=hdeA;gene_biotype=protein_coding;locus_tag=AB25_RS06215;old_locus_tag=AB25_4020 NZ_JJMC01000058.1 Protein Homology CDS 222458 222790 . - 0 ID=cds-WP_000756550.1;Parent=gene-AB25_RS06215;Dbxref=GenBank:WP_000756550.1;Name=WP_000756550.1;gbkey=CDS;gene=hdeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312417.1;locus_tag=AB25_RS06215;product=acid-activated periplasmic chaperone HdeA;protein_id=WP_000756550.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 223045 223617 . + . ID=gene-AB25_RS06210;Name=hdeD;gbkey=Gene;gene=hdeD;gene_biotype=protein_coding;locus_tag=AB25_RS06210;old_locus_tag=AB25_4021 NZ_JJMC01000058.1 Protein Homology CDS 223045 223617 . + 0 ID=cds-WP_000965672.1;Parent=gene-AB25_RS06210;Dbxref=GenBank:WP_000965672.1;Name=WP_000965672.1;gbkey=CDS;gene=hdeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312418.1;locus_tag=AB25_RS06210;product=acid-resistance protein HdeD;protein_id=WP_000965672.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 224416 224943 . + . ID=gene-AB25_RS06205;Name=gadE;gbkey=Gene;gene=gadE;gene_biotype=protein_coding;locus_tag=AB25_RS06205;old_locus_tag=AB25_4022 NZ_JJMC01000058.1 Protein Homology CDS 224416 224943 . + 0 ID=cds-WP_000576690.1;Parent=gene-AB25_RS06205;Dbxref=GenBank:WP_000576690.1;Name=WP_000576690.1;gbkey=CDS;gene=gadE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312419.1;locus_tag=AB25_RS06205;product=acid resistance transcriptional activator GadE;protein_id=WP_000576690.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 224944 225222 . - . ID=gene-AB25_RS0126195;Name=AB25_RS0126195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0126195 NZ_JJMC01000058.1 Protein Homology CDS 224944 225222 . - 0 ID=cds-WP_032171344.1;Parent=gene-AB25_RS0126195;Dbxref=GenBank:WP_032171344.1;Name=WP_032171344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439288.1;locus_tag=AB25_RS0126195;product=hypothetical protein;protein_id=WP_032171344.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 225330 226439 . + . ID=gene-AB25_RS06200;Name=mdtE;gbkey=Gene;gene=mdtE;gene_biotype=protein_coding;locus_tag=AB25_RS06200;old_locus_tag=AB25_4023 NZ_JJMC01000058.1 Protein Homology CDS 225330 226439 . + 0 ID=cds-WP_001340474.1;Parent=gene-AB25_RS06200;Dbxref=GenBank:WP_001340474.1;Name=WP_001340474.1;gbkey=CDS;gene=mdtE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001081792.1;locus_tag=AB25_RS06200;product=multidrug transporter subunit MdtE;protein_id=WP_001340474.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 226464 229577 . + . ID=gene-AB25_RS06195;Name=mdtF;gbkey=Gene;gene=mdtF;gene_biotype=protein_coding;locus_tag=AB25_RS06195;old_locus_tag=AB25_4024 NZ_JJMC01000058.1 Protein Homology CDS 226464 229577 . + 0 ID=cds-WP_000024889.1;Parent=gene-AB25_RS06195;Dbxref=GenBank:WP_000024889.1;Name=WP_000024889.1;gbkey=CDS;gene=mdtF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312421.1;locus_tag=AB25_RS06195;product=multidrug efflux pump RND permease MdtF;protein_id=WP_000024889.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 229940 230668 . - . ID=gene-AB25_RS06190;Name=gadW;gbkey=Gene;gene=gadW;gene_biotype=protein_coding;locus_tag=AB25_RS06190;old_locus_tag=AB25_4025 NZ_JJMC01000058.1 Protein Homology CDS 229940 230668 . - 0 ID=cds-WP_000149991.1;Parent=gene-AB25_RS06190;Dbxref=GenBank:WP_000149991.1;Name=WP_000149991.1;gbkey=CDS;gene=gadW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312422.1;locus_tag=AB25_RS06190;product=acid resistance transcriptional activator GadW;protein_id=WP_000149991.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 231036 231860 . - . ID=gene-AB25_RS06185;Name=gadX;gbkey=Gene;gene=gadX;gene_biotype=protein_coding;locus_tag=AB25_RS06185;old_locus_tag=AB25_4026 NZ_JJMC01000058.1 Protein Homology CDS 231036 231860 . - 0 ID=cds-WP_001191068.1;Parent=gene-AB25_RS06185;Dbxref=GenBank:WP_001191068.1;Name=WP_001191068.1;gbkey=CDS;gene=gadX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709339.1;locus_tag=AB25_RS06185;product=acid resistance transcriptional activator GadX;protein_id=WP_001191068.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 232230 233630 . - . ID=gene-AB25_RS06180;Name=gadA;gbkey=Gene;gene=gadA;gene_biotype=protein_coding;locus_tag=AB25_RS06180;old_locus_tag=AB25_4028 NZ_JJMC01000058.1 Protein Homology CDS 232230 233630 . - 0 ID=cds-WP_000372240.1;Parent=gene-AB25_RS06180;Dbxref=GenBank:WP_000372240.1;Name=WP_000372240.1;Ontology_term=GO:0006540,GO:0004351,GO:0030170;gbkey=CDS;gene=gadA;go_function=glutamate decarboxylase activity|0004351||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyrate shunt|0006540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417974.1;locus_tag=AB25_RS06180;product=glutamate decarboxylase;protein_id=WP_000372240.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 233841 235238 . - . ID=gene-AB25_RS06175;Name=ccp;gbkey=Gene;gene=ccp;gene_biotype=protein_coding;locus_tag=AB25_RS06175;old_locus_tag=AB25_4029 NZ_JJMC01000058.1 Protein Homology CDS 233841 235238 . - 0 ID=cds-WP_000784821.1;Parent=gene-AB25_RS06175;Dbxref=GenBank:WP_000784821.1;Name=WP_000784821.1;gbkey=CDS;gene=ccp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312425.1;locus_tag=AB25_RS06175;product=cytochrome c peroxidase;protein_id=WP_000784821.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 235643 237292 . + . ID=gene-AB25_RS06170;Name=treF;gbkey=Gene;gene=treF;gene_biotype=protein_coding;locus_tag=AB25_RS06170;old_locus_tag=AB25_4030 NZ_JJMC01000058.1 Protein Homology CDS 235643 237292 . + 0 ID=cds-WP_005133903.1;Parent=gene-AB25_RS06170;Dbxref=GenBank:WP_005133903.1;Name=WP_005133903.1;Ontology_term=GO:0005993,GO:0004555;gbkey=CDS;gene=treF;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose catabolic process|0005993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709297.1;locus_tag=AB25_RS06170;product=alpha%2Calpha-trehalase;protein_id=WP_005133903.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 237343 237945 . - . ID=gene-AB25_RS06165;Name=yhjB;gbkey=Gene;gene=yhjB;gene_biotype=protein_coding;locus_tag=AB25_RS06165;old_locus_tag=AB25_4031 NZ_JJMC01000058.1 Protein Homology CDS 237343 237945 . - 0 ID=cds-WP_001167676.1;Parent=gene-AB25_RS06165;Dbxref=GenBank:WP_001167676.1;Name=WP_001167676.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=yhjB;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417977.1;locus_tag=AB25_RS06165;product=helix-turn-helix transcriptional regulator;protein_id=WP_001167676.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 238465 239364 . + . ID=gene-AB25_RS06160;Name=rcdB;gbkey=Gene;gene=rcdB;gene_biotype=protein_coding;locus_tag=AB25_RS06160;old_locus_tag=AB25_4032 NZ_JJMC01000058.1 Protein Homology CDS 238465 239364 . + 0 ID=cds-WP_001307449.1;Parent=gene-AB25_RS06160;Dbxref=GenBank:WP_001307449.1;Name=WP_001307449.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=rcdB;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417978.2;locus_tag=AB25_RS06160;product=LysR family transcriptional regulator;protein_id=WP_001307449.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 239413 240426 . + . ID=gene-AB25_RS06155;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=AB25_RS06155;old_locus_tag=AB25_4033 NZ_JJMC01000058.1 Protein Homology CDS 239413 240426 . + 0 ID=cds-WP_000191257.1;Parent=gene-AB25_RS06155;Dbxref=GenBank:WP_000191257.1;Name=WP_000191257.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312429.1;locus_tag=AB25_RS06155;product=inner membrane protein YhjD;protein_id=WP_000191257.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 240837 242159 . + . ID=gene-AB25_RS06150;Name=yhjE;gbkey=Gene;gene=yhjE;gene_biotype=protein_coding;locus_tag=AB25_RS06150;old_locus_tag=AB25_4034 NZ_JJMC01000058.1 Protein Homology CDS 240837 242159 . + 0 ID=cds-WP_001149002.1;Parent=gene-AB25_RS06150;Dbxref=GenBank:WP_001149002.1;Name=WP_001149002.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yhjE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417980.1;locus_tag=AB25_RS06150;product=MFS transporter;protein_id=WP_001149002.1;transl_table=11 NZ_JJMC01000058.1 RefSeq gene 242397 243553 . - . ID=gene-AB25_RS06145;Name=AB25_RS06145;end_range=243553,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS06145;old_locus_tag=AB25_4035;partial=true NZ_JJMC01000058.1 Protein Homology CDS 242397 243553 . - 2 ID=cds-WP_032175154.1;Parent=gene-AB25_RS06145;Dbxref=GenBank:WP_032175154.1;Name=WP_032175154.1;end_range=243553,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709302.2;locus_tag=AB25_RS06145;partial=true;product=AsmA family protein;protein_id=WP_032175154.1;transl_table=11 ##sequence-region NZ_JJMC01000059.1 1 3660 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000059.1 RefSeq region 1 3660 . + . ID=NZ_JJMC01000059.1:1..3660;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000059.1 RefSeq gene 1 3660 . + . ID=gene-AB25_RS06140;Name=rhsB;end_range=3660,.;gbkey=Gene;gene=rhsB;gene_biotype=protein_coding;locus_tag=AB25_RS06140;old_locus_tag=AB25_4036;partial=true;start_range=.,1 NZ_JJMC01000059.1 Protein Homology CDS 1 3660 . + 0 ID=cds-WP_064735392.1;Parent=gene-AB25_RS06140;Dbxref=GenBank:WP_064735392.1;Name=WP_064735392.1;end_range=3660,.;gbkey=CDS;gene=rhsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026224.1;locus_tag=AB25_RS06140;partial=true;product=rhs element protein RhsB;protein_id=WP_064735392.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JJMC01000060.1 1 1884 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000060.1 RefSeq region 1 1884 . + . ID=NZ_JJMC01000060.1:1..1884;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000060.1 RefSeq gene 1 785 . + . ID=gene-AB25_RS0126200;Name=AB25_RS0126200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0126200;old_locus_tag=AB25_4037;partial=true;start_range=.,1 NZ_JJMC01000060.1 Protein Homology CDS 1 785 . + 2 ID=cds-WP_204361936.1;Parent=gene-AB25_RS0126200;Dbxref=GenBank:WP_204361936.1;Name=WP_204361936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418050.1;locus_tag=AB25_RS0126200;partial=true;product=polymorphic toxin type 34 domain-containing protein;protein_id=WP_204361936.1;start_range=.,1;transl_table=11 NZ_JJMC01000060.1 RefSeq gene 806 1648 . + . ID=gene-AB25_RS06135;Name=yibA;gbkey=Gene;gene=yibA;gene_biotype=protein_coding;locus_tag=AB25_RS06135;old_locus_tag=AB25_4038 NZ_JJMC01000060.1 Protein Homology CDS 806 1648 . + 0 ID=cds-WP_000072850.1;Parent=gene-AB25_RS06135;Dbxref=GenBank:WP_000072850.1;Name=WP_000072850.1;gbkey=CDS;gene=yibA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418051.1;locus_tag=AB25_RS06135;product=HEAT repeat domain-containing protein;protein_id=WP_000072850.1;transl_table=11 NZ_JJMC01000060.1 RefSeq pseudogene 1678 1884 . + . ID=gene-AB25_RS06130;Name=AB25_RS06130;end_range=1884,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS06130;old_locus_tag=AB25_4039;partial=true;pseudo=true;start_range=.,1678 NZ_JJMC01000060.1 Protein Homology CDS 1678 1884 . + 0 ID=cds-AB25_RS06130;Parent=gene-AB25_RS06130;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1884,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026224.1;locus_tag=AB25_RS06130;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1678;transl_table=11 ##sequence-region NZ_JJMC01000061.1 1 21212 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000061.1 RefSeq region 1 21212 . + . ID=NZ_JJMC01000061.1:1..21212;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000061.1 RefSeq pseudogene 1 287 . + . ID=gene-AB25_RS28995;Name=AB25_RS28995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS28995;old_locus_tag=AB25_4040;partial=true;pseudo=true;start_range=.,1 NZ_JJMC01000061.1 Protein Homology CDS 1 287 . + 1 ID=cds-AB25_RS28995;Parent=gene-AB25_RS28995;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB25_RS28995;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJMC01000061.1 RefSeq pseudogene 315 464 . - . ID=gene-AB25_RS0126210;Name=AB25_RS0126210;end_range=464,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS0126210;partial=true;pseudo=true NZ_JJMC01000061.1 Protein Homology CDS 315 464 . - 0 ID=cds-AB25_RS0126210;Parent=gene-AB25_RS0126210;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=464,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904571.1;locus_tag=AB25_RS0126210;partial=true;product=transposase domain-containing protein;pseudo=true;transl_table=11 NZ_JJMC01000061.1 RefSeq gene 622 1593 . - . ID=gene-AB25_RS06125;Name=AB25_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS06125;old_locus_tag=AB25_4041 NZ_JJMC01000061.1 Protein Homology CDS 622 1593 . - 0 ID=cds-WP_032171389.1;Parent=gene-AB25_RS06125;Dbxref=GenBank:WP_032171389.1;Name=WP_032171389.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001347735.1;locus_tag=AB25_RS06125;product=IS481 family transposase;protein_id=WP_032171389.1;transl_table=11 NZ_JJMC01000061.1 RefSeq gene 1650 2102 . + . ID=gene-AB25_RS32045;Name=AB25_RS32045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32045 NZ_JJMC01000061.1 Protein Homology CDS 1650 2102 . + 0 ID=cds-WP_023356211.1;Parent=gene-AB25_RS32045;Dbxref=GenBank:WP_023356211.1;Name=WP_023356211.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019984.6;locus_tag=AB25_RS32045;product=group II intron maturase-specific domain-containing protein;protein_id=WP_023356211.1;transl_table=11 NZ_JJMC01000061.1 RefSeq gene 2162 3259 . - . ID=gene-AB25_RS06120;Name=AB25_RS06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS06120;old_locus_tag=AB25_4042 NZ_JJMC01000061.1 Protein Homology CDS 2162 3259 . - 0 ID=cds-WP_023356212.1;Parent=gene-AB25_RS06120;Dbxref=GenBank:WP_023356212.1;Name=WP_023356212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001460238.1;locus_tag=AB25_RS06120;product=hypothetical protein;protein_id=WP_023356212.1;transl_table=11 NZ_JJMC01000061.1 RefSeq gene 3386 4015 . - . ID=gene-AB25_RS0126220;Name=AB25_RS0126220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0126220 NZ_JJMC01000061.1 Protein Homology CDS 3386 4015 . - 0 ID=cds-WP_021527210.1;Parent=gene-AB25_RS0126220;Dbxref=GenBank:WP_021527210.1;Name=WP_021527210.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000621743.1;locus_tag=AB25_RS0126220;product=ABC transporter ATP-binding protein;protein_id=WP_021527210.1;transl_table=11 NZ_JJMC01000061.1 RefSeq gene 3996 4787 . - . ID=gene-AB25_RS06115;Name=AB25_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS06115;old_locus_tag=AB25_4043 NZ_JJMC01000061.1 Protein Homology CDS 3996 4787 . - 0 ID=cds-WP_272749945.1;Parent=gene-AB25_RS06115;Dbxref=GenBank:WP_272749945.1;Name=WP_272749945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534021.1;locus_tag=AB25_RS06115;product=hypothetical protein;protein_id=WP_272749945.1;transl_table=11 NZ_JJMC01000061.1 RefSeq gene 4717 5955 . - . ID=gene-AB25_RS06110;Name=AB25_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS06110;old_locus_tag=AB25_4044 NZ_JJMC01000061.1 Protein Homology CDS 4717 5955 . - 0 ID=cds-WP_023356213.1;Parent=gene-AB25_RS06110;Dbxref=GenBank:WP_023356213.1;Name=WP_023356213.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001514052.1;locus_tag=AB25_RS06110;product=TolC family protein;protein_id=WP_023356213.1;transl_table=11 NZ_JJMC01000061.1 RefSeq gene 5952 7094 . - . ID=gene-AB25_RS06105;Name=AB25_RS06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS06105;old_locus_tag=AB25_4045 NZ_JJMC01000061.1 Protein Homology CDS 5952 7094 . - 0 ID=cds-WP_021523949.1;Parent=gene-AB25_RS06105;Dbxref=GenBank:WP_021523949.1;Name=WP_021523949.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001460237.1;locus_tag=AB25_RS06105;product=ABC transporter permease;protein_id=WP_021523949.1;transl_table=11 NZ_JJMC01000061.1 RefSeq pseudogene 7287 7964 . - . ID=gene-AB25_RS27235;Name=tnpC;end_range=7964,.;gbkey=Gene;gene=tnpC;gene_biotype=pseudogene;locus_tag=AB25_RS27235;old_locus_tag=AB25_4046;partial=true;pseudo=true;start_range=.,7287 NZ_JJMC01000061.1 Protein Homology CDS 7287 7964 . - 0 ID=cds-AB25_RS27235;Parent=gene-AB25_RS27235;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0004803;end_range=7964,.;gbkey=CDS;gene=tnpC;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904571.1;locus_tag=AB25_RS27235;partial=true;product=IS66 family transposase;pseudo=true;start_range=.,7287;transl_table=11 NZ_JJMC01000061.1 RefSeq pseudogene 7993 8838 . + . ID=gene-AB25_RS06100;Name=AB25_RS06100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS06100;old_locus_tag=AB25_4047;partial=true;pseudo=true;start_range=.,7993 NZ_JJMC01000061.1 Protein Homology CDS 7993 8838 . + 0 ID=cds-AB25_RS06100;Parent=gene-AB25_RS06100;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=AB25_RS06100;partial=true;product=integrase core domain-containing protein;pseudo=true;start_range=.,7993;transl_table=11 NZ_JJMC01000061.1 RefSeq gene 9033 9380 . - . ID=gene-AB25_RS0126230;Name=AB25_RS0126230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0126230 NZ_JJMC01000061.1 Protein Homology CDS 9033 9380 . - 0 ID=cds-WP_021523946.1;Parent=gene-AB25_RS0126230;Dbxref=GenBank:WP_021523946.1;Name=WP_021523946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000721276.1;locus_tag=AB25_RS0126230;product=hypothetical protein;protein_id=WP_021523946.1;transl_table=11 NZ_JJMC01000061.1 RefSeq gene 9481 9648 . - . ID=gene-AB25_RS31790;Name=AB25_RS31790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31790;old_locus_tag=AB25_4048 NZ_JJMC01000061.1 GeneMarkS-2+ CDS 9481 9648 . - 0 ID=cds-WP_154673560.1;Parent=gene-AB25_RS31790;Dbxref=GenBank:WP_154673560.1;Name=WP_154673560.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB25_RS31790;product=hypothetical protein;protein_id=WP_154673560.1;transl_table=11 NZ_JJMC01000061.1 RefSeq gene 9878 10336 . - . ID=gene-AB25_RS31795;Name=AB25_RS31795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31795 NZ_JJMC01000061.1 GeneMarkS-2+ CDS 9878 10336 . - 0 ID=cds-WP_140422843.1;Parent=gene-AB25_RS31795;Dbxref=GenBank:WP_140422843.1;Name=WP_140422843.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB25_RS31795;product=hypothetical protein;protein_id=WP_140422843.1;transl_table=11 NZ_JJMC01000061.1 RefSeq gene 10488 10922 . - . ID=gene-AB25_RS0126235;Name=afaD;gbkey=Gene;gene=afaD;gene_biotype=protein_coding;locus_tag=AB25_RS0126235 NZ_JJMC01000061.1 Protein Homology CDS 10488 10922 . - 0 ID=cds-WP_021523944.1;Parent=gene-AB25_RS0126235;Dbxref=GenBank:WP_021523944.1;Name=WP_021523944.1;gbkey=CDS;gene=afaD;inference=COORDINATES: protein motif:HMM:NF017581.6;locus_tag=AB25_RS0126235;product=AfaD family invasin;protein_id=WP_021523944.1;transl_table=11 NZ_JJMC01000061.1 RefSeq gene 10938 13532 . - . ID=gene-AB25_RS06095;Name=AB25_RS06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS06095;old_locus_tag=AB25_4049 NZ_JJMC01000061.1 Protein Homology CDS 10938 13532 . - 0 ID=cds-WP_077577668.1;Parent=gene-AB25_RS06095;Dbxref=GenBank:WP_077577668.1;Name=WP_077577668.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000554932.1;locus_tag=AB25_RS06095;product=fimbria/pilus outer membrane usher protein;protein_id=WP_077577668.1;transl_table=11 NZ_JJMC01000061.1 RefSeq gene 13563 14321 . - . ID=gene-AB25_RS06090;Name=AB25_RS06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS06090;old_locus_tag=AB25_4050 NZ_JJMC01000061.1 Protein Homology CDS 13563 14321 . - 0 ID=cds-WP_032145366.1;Parent=gene-AB25_RS06090;Dbxref=GenBank:WP_032145366.1;Name=WP_032145366.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014639428.1;locus_tag=AB25_RS06090;product=fimbria/pilus periplasmic chaperone;protein_id=WP_032145366.1;transl_table=11 NZ_JJMC01000061.1 RefSeq pseudogene 14630 14761 . - . ID=gene-AB25_RS31375;Name=AB25_RS31375;end_range=14761,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS31375;partial=true;pseudo=true NZ_JJMC01000061.1 Protein Homology CDS 14630 14761 . - 0 ID=cds-AB25_RS31375;Parent=gene-AB25_RS31375;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=14761,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011787828.1;locus_tag=AB25_RS31375;partial=true;product=IS630 family transposase;pseudo=true;transl_table=11 NZ_JJMC01000061.1 RefSeq pseudogene 14797 16050 . + . ID=gene-AB25_RS0126240;Name=iroC;gbkey=Gene;gene=iroC;gene_biotype=pseudogene;locus_tag=AB25_RS0126240;partial=true;pseudo=true;start_range=.,14797 NZ_JJMC01000061.1 Protein Homology CDS 14797 16050 . + 0 ID=cds-AB25_RS0126240;Parent=gene-AB25_RS0126240;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=iroC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001318221.1;locus_tag=AB25_RS0126240;partial=true;product=salmochelin/enterobactin export ABC transporter IroC;pseudo=true;start_range=.,14797;transl_table=11 NZ_JJMC01000061.1 RefSeq gene 16154 17383 . + . ID=gene-AB25_RS06085;Name=iroD;gbkey=Gene;gene=iroD;gene_biotype=protein_coding;locus_tag=AB25_RS06085;old_locus_tag=AB25_4054 NZ_JJMC01000061.1 Protein Homology CDS 16154 17383 . + 0 ID=cds-WP_023356221.1;Parent=gene-AB25_RS06085;Dbxref=GenBank:WP_023356221.1;Name=WP_023356221.1;gbkey=CDS;gene=iroD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000933675.1;locus_tag=AB25_RS06085;product=catecholate siderophore esterase IroD;protein_id=WP_023356221.1;transl_table=11 NZ_JJMC01000061.1 RefSeq gene 17468 18424 . + . ID=gene-AB25_RS06080;Name=iroE;gbkey=Gene;gene=iroE;gene_biotype=protein_coding;locus_tag=AB25_RS06080;old_locus_tag=AB25_4055 NZ_JJMC01000061.1 Protein Homology CDS 17468 18424 . + 0 ID=cds-WP_032171395.1;Parent=gene-AB25_RS06080;Dbxref=GenBank:WP_032171395.1;Name=WP_032171395.1;gbkey=CDS;gene=iroE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000271276.1;locus_tag=AB25_RS06080;product=catecholate siderophore esterase IroE;protein_id=WP_032171395.1;transl_table=11 NZ_JJMC01000061.1 RefSeq pseudogene 18469 19200 . - . ID=gene-AB25_RS06075;Name=iroN;end_range=19200,.;gbkey=Gene;gene=iroN;gene_biotype=pseudogene;locus_tag=AB25_RS06075;old_locus_tag=AB25_4056;partial=true;pseudo=true NZ_JJMC01000061.1 Protein Homology CDS 18469 19200 . - 0 ID=cds-AB25_RS06075;Parent=gene-AB25_RS06075;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=19200,.;gbkey=CDS;gene=iroN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001222186.1;locus_tag=AB25_RS06075;partial=true;product=siderophore salmochelin receptor IroN;pseudo=true;transl_table=11 NZ_JJMC01000061.1 RefSeq pseudogene 19248 20618 . + . ID=gene-AB25_RS30595;Name=AB25_RS30595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS30595;pseudo=true NZ_JJMC01000061.1 Protein Homology CDS 19248 20618 . + 0 ID=cds-AB25_RS30595;Parent=gene-AB25_RS30595;Note=frameshifted;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611947.1;locus_tag=AB25_RS30595;product=IS3-like element IS150 family transposase;pseudo=true;transl_table=11 NZ_JJMC01000061.1 RefSeq gene 20993 21212 . - . ID=gene-AB25_RS32050;Name=AB25_RS32050;end_range=21212,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32050;partial=true NZ_JJMC01000061.1 GeneMarkS-2+ CDS 20993 21212 . - 1 ID=cds-WP_249402587.1;Parent=gene-AB25_RS32050;Dbxref=GenBank:WP_249402587.1;Name=WP_249402587.1;end_range=21212,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB25_RS32050;partial=true;product=hypothetical protein;protein_id=WP_249402587.1;transl_table=11 ##sequence-region NZ_JJMC01000062.1 1 78380 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000062.1 RefSeq region 1 78380 . + . ID=NZ_JJMC01000062.1:1..78380;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000062.1 RefSeq gene 45 2105 . - . ID=gene-AB25_RS06065;Name=yhjG;gbkey=Gene;gene=yhjG;gene_biotype=protein_coding;locus_tag=AB25_RS06065;old_locus_tag=AB25_4060 NZ_JJMC01000062.1 Protein Homology CDS 45 2105 . - 0 ID=cds-WP_001296794.1;Parent=gene-AB25_RS06065;Dbxref=GenBank:WP_001296794.1;Name=WP_001296794.1;gbkey=CDS;gene=yhjG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417981.2;locus_tag=AB25_RS06065;product=AsmA family protein;protein_id=WP_001296794.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 2175 2942 . - . ID=gene-AB25_RS0126255;Name=pdeH;gbkey=Gene;gene=pdeH;gene_biotype=protein_coding;locus_tag=AB25_RS0126255;old_locus_tag=AB25_4061 NZ_JJMC01000062.1 Protein Homology CDS 2175 2942 . - 0 ID=cds-WP_001307451.1;Parent=gene-AB25_RS0126255;Dbxref=GenBank:WP_001307451.1;Name=WP_001307451.1;gbkey=CDS;gene=pdeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417982.2;locus_tag=AB25_RS0126255;product=cyclic-guanylate-specific phosphodiesterase;protein_id=WP_001307451.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 3174 4103 . + . ID=gene-AB25_RS06060;Name=kdgK;gbkey=Gene;gene=kdgK;gene_biotype=protein_coding;locus_tag=AB25_RS06060;old_locus_tag=AB25_4063 NZ_JJMC01000062.1 Protein Homology CDS 3174 4103 . + 0 ID=cds-WP_001296796.1;Parent=gene-AB25_RS06060;Dbxref=GenBank:WP_001296796.1;Name=WP_001296796.1;gbkey=CDS;gene=kdgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417983.2;locus_tag=AB25_RS06060;product=2-dehydro-3-deoxygluconokinase;protein_id=WP_001296796.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 4199 5695 . - . ID=gene-AB25_RS06055;Name=yhjJ;gbkey=Gene;gene=yhjJ;gene_biotype=protein_coding;locus_tag=AB25_RS06055;old_locus_tag=AB25_4064 NZ_JJMC01000062.1 Protein Homology CDS 4199 5695 . - 0 ID=cds-WP_032173562.1;Parent=gene-AB25_RS06055;Dbxref=GenBank:WP_032173562.1;Name=WP_032173562.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;gene=yhjJ;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312434.1;locus_tag=AB25_RS06055;product=M16 family metallopeptidase;protein_id=WP_032173562.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 5916 7202 . - . ID=gene-AB25_RS06050;Name=dctA;gbkey=Gene;gene=dctA;gene_biotype=protein_coding;locus_tag=AB25_RS06050;old_locus_tag=AB25_4065 NZ_JJMC01000062.1 Protein Homology CDS 5916 7202 . - 0 ID=cds-WP_000858214.1;Parent=gene-AB25_RS06050;Dbxref=GenBank:WP_000858214.1;Name=WP_000858214.1;gbkey=CDS;gene=dctA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417985.1;locus_tag=AB25_RS06050;product=C4-dicarboxylate transporter DctC;protein_id=WP_000858214.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 7385 9373 . - . ID=gene-AB25_RS06045;Name=hmsP;gbkey=Gene;gene=hmsP;gene_biotype=protein_coding;locus_tag=AB25_RS06045;old_locus_tag=AB25_4067 NZ_JJMC01000062.1 Protein Homology CDS 7385 9373 . - 0 ID=cds-WP_001266306.1;Parent=gene-AB25_RS06045;Dbxref=GenBank:WP_001266306.1;Name=WP_001266306.1;Ontology_term=GO:0007165;gbkey=CDS;gene=hmsP;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417986.4;locus_tag=AB25_RS06045;product=biofilm formation regulator HmsP;protein_id=WP_001266306.1;transl_table=11 NZ_JJMC01000062.1 RefSeq pseudogene 9455 12928 . - . ID=gene-AB25_RS06040;Name=bcsC;gbkey=Gene;gene=bcsC;gene_biotype=pseudogene;locus_tag=AB25_RS06040;old_locus_tag=AB25_4068;pseudo=true NZ_JJMC01000062.1 Protein Homology CDS 9455 12928 . - 0 ID=cds-AB25_RS06040;Parent=gene-AB25_RS06040;Note=internal stop;Ontology_term=GO:0030244,GO:0005515,GO:0019867;gbkey=CDS;gene=bcsC;go_component=outer membrane|0019867||IEA;go_function=protein binding|0005515||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026226.4;locus_tag=AB25_RS06040;product=cellulose synthase complex outer membrane protein BcsC;pseudo=true;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 12910 14016 . - . ID=gene-AB25_RS06035;Name=bcsZ;gbkey=Gene;gene=bcsZ;gene_biotype=protein_coding;locus_tag=AB25_RS06035;old_locus_tag=AB25_4070 NZ_JJMC01000062.1 Protein Homology CDS 12910 14016 . - 0 ID=cds-WP_001307453.1;Parent=gene-AB25_RS06035;Dbxref=GenBank:WP_001307453.1;Name=WP_001307453.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bcsZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312438.1;locus_tag=AB25_RS06035;product=cellulose synthase complex periplasmic endoglucanase BcsZ;protein_id=WP_001307453.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 14023 16362 . - . ID=gene-AB25_RS06030;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=AB25_RS06030;old_locus_tag=AB25_4071 NZ_JJMC01000062.1 Protein Homology CDS 14023 16362 . - 0 ID=cds-WP_032296144.1;Parent=gene-AB25_RS06030;Dbxref=GenBank:WP_032296144.1;Name=WP_032296144.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417989.1;locus_tag=AB25_RS06030;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WP_032296144.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 16373 18991 . - . ID=gene-AB25_RS06025;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=AB25_RS06025;old_locus_tag=AB25_4072 NZ_JJMC01000062.1 Protein Homology CDS 16373 18991 . - 0 ID=cds-WP_032171382.1;Parent=gene-AB25_RS06025;Dbxref=GenBank:WP_032171382.1;Name=WP_032171382.1;Ontology_term=GO:0006011,GO:0030244,GO:0016760,GO:0035438,GO:0016020;gbkey=CDS;gene=bcsA;go_component=membrane|0016020||IEA;go_function=cellulose synthase (UDP-forming) activity|0016760||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417990.4;locus_tag=AB25_RS06025;product=UDP-forming cellulose synthase catalytic subunit;protein_id=WP_032171382.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 18988 19740 . - . ID=gene-AB25_RS06020;Name=bcsQ;gbkey=Gene;gene=bcsQ;gene_biotype=protein_coding;locus_tag=AB25_RS06020;old_locus_tag=AB25_4073 NZ_JJMC01000062.1 Protein Homology CDS 18988 19740 . - 0 ID=cds-WP_000279547.1;Parent=gene-AB25_RS06020;Dbxref=GenBank:WP_000279547.1;Name=WP_000279547.1;gbkey=CDS;gene=bcsQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709309.1;locus_tag=AB25_RS06020;product=cellulose biosynthesis protein BcsQ;protein_id=WP_000279547.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 19752 19940 . - . ID=gene-AB25_RS06015;Name=bcsR;gbkey=Gene;gene=bcsR;gene_biotype=protein_coding;locus_tag=AB25_RS06015;old_locus_tag=AB25_4074 NZ_JJMC01000062.1 Protein Homology CDS 19752 19940 . - 0 ID=cds-WP_001063318.1;Parent=gene-AB25_RS06015;Dbxref=GenBank:WP_001063318.1;Name=WP_001063318.1;gbkey=CDS;gene=bcsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417992.1;locus_tag=AB25_RS06015;product=cellulose biosynthesis protein BcsR;protein_id=WP_001063318.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 20213 21784 . + . ID=gene-AB25_RS06010;Name=bcsE;gbkey=Gene;gene=bcsE;gene_biotype=protein_coding;locus_tag=AB25_RS06010;old_locus_tag=AB25_4075 NZ_JJMC01000062.1 Protein Homology CDS 20213 21784 . + 0 ID=cds-WP_001204931.1;Parent=gene-AB25_RS06010;Dbxref=GenBank:WP_001204931.1;Name=WP_001204931.1;Ontology_term=GO:0035438;gbkey=CDS;gene=bcsE;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417993.1;locus_tag=AB25_RS06010;product=cellulose biosynthesis c-di-GMP-binding protein BcsE;protein_id=WP_001204931.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 21781 21972 . + . ID=gene-AB25_RS06005;Name=bcsF;gbkey=Gene;gene=bcsF;gene_biotype=protein_coding;locus_tag=AB25_RS06005;old_locus_tag=AB25_4076 NZ_JJMC01000062.1 Protein Homology CDS 21781 21972 . + 0 ID=cds-WP_000988308.1;Parent=gene-AB25_RS06005;Dbxref=GenBank:WP_000988308.1;Name=WP_000988308.1;Ontology_term=GO:0052324;gbkey=CDS;gene=bcsF;go_process=plant-type cell wall cellulose biosynthetic process|0052324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417994.2;locus_tag=AB25_RS06005;product=cellulose biosynthesis protein BcsF;protein_id=WP_000988308.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 21969 23648 . + . ID=gene-AB25_RS06000;Name=bcsG;gbkey=Gene;gene=bcsG;gene_biotype=protein_coding;locus_tag=AB25_RS06000;old_locus_tag=AB25_4077 NZ_JJMC01000062.1 Protein Homology CDS 21969 23648 . + 0 ID=cds-WP_000191596.1;Parent=gene-AB25_RS06000;Dbxref=GenBank:WP_000191596.1;Name=WP_000191596.1;Ontology_term=GO:0030244;gbkey=CDS;gene=bcsG;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312445.1;locus_tag=AB25_RS06000;product=cellulose biosynthesis protein BcsG;protein_id=WP_000191596.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 23735 23842 . - . ID=gene-AB25_RS29050;Name=AB25_RS29050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS29050 NZ_JJMC01000062.1 Protein Homology CDS 23735 23842 . - 0 ID=cds-WP_001295224.1;Parent=gene-AB25_RS29050;Dbxref=GenBank:WP_001295224.1;Name=WP_001295224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502657.1;locus_tag=AB25_RS29050;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_001295224.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 24218 24325 . - . ID=gene-AB25_RS31800;Name=AB25_RS31800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31800 NZ_JJMC01000062.1 Protein Homology CDS 24218 24325 . - 0 ID=cds-WP_001295224.1-2;Parent=gene-AB25_RS31800;Dbxref=GenBank:WP_001295224.1;Name=WP_001295224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502657.1;locus_tag=AB25_RS31800;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_001295224.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 24701 24808 . - . ID=gene-AB25_RS31385;Name=AB25_RS31385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31385 NZ_JJMC01000062.1 Protein Homology CDS 24701 24808 . - 0 ID=cds-WP_001295224.1-3;Parent=gene-AB25_RS31385;Dbxref=GenBank:WP_001295224.1;Name=WP_001295224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502657.1;locus_tag=AB25_RS31385;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_001295224.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 25184 25291 . - . ID=gene-AB25_RS32055;Name=AB25_RS32055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32055 NZ_JJMC01000062.1 Protein Homology CDS 25184 25291 . - 0 ID=cds-WP_001295224.1-4;Parent=gene-AB25_RS32055;Dbxref=GenBank:WP_001295224.1;Name=WP_001295224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502657.1;locus_tag=AB25_RS32055;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_001295224.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 25767 27038 . + . ID=gene-AB25_RS05970;Name=yhjV;gbkey=Gene;gene=yhjV;gene_biotype=protein_coding;locus_tag=AB25_RS05970;old_locus_tag=AB25_4083 NZ_JJMC01000062.1 Protein Homology CDS 25767 27038 . + 0 ID=cds-WP_001296805.1;Parent=gene-AB25_RS05970;Dbxref=GenBank:WP_001296805.1;Name=WP_001296805.1;gbkey=CDS;gene=yhjV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417996.1;locus_tag=AB25_RS05970;product=aromatic amino acid transport family protein;protein_id=WP_001296805.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 27068 28072 . - . ID=gene-AB25_RS05965;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=AB25_RS05965;old_locus_tag=AB25_4084 NZ_JJMC01000062.1 Protein Homology CDS 27068 28072 . - 0 ID=cds-WP_000107031.1;Parent=gene-AB25_RS05965;Dbxref=GenBank:WP_000107031.1;Name=WP_000107031.1;gbkey=CDS;gene=dppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312447.1;locus_tag=AB25_RS05965;product=dipeptide ABC transporter ATP-binding subunit DppF;protein_id=WP_000107031.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 28069 29052 . - . ID=gene-AB25_RS05960;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=AB25_RS05960;old_locus_tag=AB25_4085 NZ_JJMC01000062.1 Protein Homology CDS 28069 29052 . - 0 ID=cds-WP_001196486.1;Parent=gene-AB25_RS05960;Dbxref=GenBank:WP_001196486.1;Name=WP_001196486.1;Ontology_term=GO:0015833,GO:0000166,GO:0005524;gbkey=CDS;gene=dppD;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312448.1;locus_tag=AB25_RS05960;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_001196486.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 29063 29965 . - . ID=gene-AB25_RS05955;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=AB25_RS05955;old_locus_tag=AB25_4086 NZ_JJMC01000062.1 Protein Homology CDS 29063 29965 . - 0 ID=cds-WP_000084677.1;Parent=gene-AB25_RS05955;Dbxref=GenBank:WP_000084677.1;Name=WP_000084677.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426221.1;locus_tag=AB25_RS05955;product=dipeptide ABC transporter permease DppC;protein_id=WP_000084677.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 29975 30994 . - . ID=gene-AB25_RS05950;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=AB25_RS05950;old_locus_tag=AB25_4087 NZ_JJMC01000062.1 Protein Homology CDS 29975 30994 . - 0 ID=cds-WP_001483899.1;Parent=gene-AB25_RS05950;Dbxref=GenBank:WP_001483899.1;Name=WP_001483899.1;gbkey=CDS;gene=dppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=AB25_RS05950;product=dipeptide ABC transporter permease DppB;protein_id=WP_001483899.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 31302 32909 . - . ID=gene-AB25_RS05945;Name=dppA;gbkey=Gene;gene=dppA;gene_biotype=protein_coding;locus_tag=AB25_RS05945;old_locus_tag=AB25_4089 NZ_JJMC01000062.1 Protein Homology CDS 31302 32909 . - 0 ID=cds-WP_001222883.1;Parent=gene-AB25_RS05945;Dbxref=GenBank:WP_001222883.1;Name=WP_001222883.1;gbkey=CDS;gene=dppA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418001.1;locus_tag=AB25_RS05945;product=dipeptide ABC transporter substrate-binding protein DppA;protein_id=WP_001222883.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 33655 33788 . - . ID=gene-AB25_RS27385;Name=AB25_RS27385;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AB25_RS27385 NZ_JJMC01000062.1 cmsearch ncRNA 33655 33788 . - . ID=rna-AB25_RS27385;Parent=gene-AB25_RS27385;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS27385;product=RtT sRNA NZ_JJMC01000062.1 cmsearch exon 33655 33788 . - . ID=exon-AB25_RS27385-1;Parent=rna-AB25_RS27385;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS27385;product=RtT sRNA NZ_JJMC01000062.1 RefSeq gene 33823 33956 . - . ID=gene-AB25_RS27390;Name=AB25_RS27390;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AB25_RS27390 NZ_JJMC01000062.1 cmsearch ncRNA 33823 33956 . - . ID=rna-AB25_RS27390;Parent=gene-AB25_RS27390;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS27390;product=RtT sRNA NZ_JJMC01000062.1 cmsearch exon 33823 33956 . - . ID=exon-AB25_RS27390-1;Parent=rna-AB25_RS27390;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS27390;product=RtT sRNA NZ_JJMC01000062.1 RefSeq gene 33991 34124 . - . ID=gene-AB25_RS27395;Name=AB25_RS27395;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AB25_RS27395 NZ_JJMC01000062.1 cmsearch ncRNA 33991 34124 . - . ID=rna-AB25_RS27395;Parent=gene-AB25_RS27395;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS27395;product=RtT sRNA NZ_JJMC01000062.1 cmsearch exon 33991 34124 . - . ID=exon-AB25_RS27395-1;Parent=rna-AB25_RS27395;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS27395;product=RtT sRNA NZ_JJMC01000062.1 RefSeq gene 34159 34235 . - . ID=gene-AB25_RS05940;Name=AB25_RS05940;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS05940;old_locus_tag=AB25_4092 NZ_JJMC01000062.1 tRNAscan-SE tRNA 34159 34235 . - . ID=rna-AB25_RS05940;Parent=gene-AB25_RS05940;anticodon=(pos:complement(34199..34201));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS05940;product=tRNA-Pro NZ_JJMC01000062.1 tRNAscan-SE exon 34159 34235 . - . ID=exon-AB25_RS05940-1;Parent=rna-AB25_RS05940;anticodon=(pos:complement(34199..34201));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS05940;product=tRNA-Pro NZ_JJMC01000062.1 RefSeq gene 34327 36018 . - . ID=gene-AB25_RS05935;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=protein_coding;locus_tag=AB25_RS05935;old_locus_tag=AB25_4093 NZ_JJMC01000062.1 Protein Homology CDS 34327 36018 . - 0 ID=cds-WP_001269224.1;Parent=gene-AB25_RS05935;Dbxref=GenBank:WP_001269224.1;Name=WP_001269224.1;Ontology_term=GO:0008484;gbkey=CDS;gene=eptB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418002.2;locus_tag=AB25_RS05935;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;protein_id=WP_001269224.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 36342 37550 . - . ID=gene-AB25_RS05930;Name=yhjX;gbkey=Gene;gene=yhjX;gene_biotype=protein_coding;locus_tag=AB25_RS05930;old_locus_tag=AB25_4094 NZ_JJMC01000062.1 Protein Homology CDS 36342 37550 . - 0 ID=cds-WP_000189037.1;Parent=gene-AB25_RS05930;Dbxref=GenBank:WP_000189037.1;Name=WP_000189037.1;Ontology_term=GO:0015129;gbkey=CDS;gene=yhjX;go_function=lactate transmembrane transporter activity|0015129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709325.2;locus_tag=AB25_RS05930;product=L-lactate MFS transporter;protein_id=WP_000189037.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 37779 38477 . - . ID=gene-AB25_RS05925;Name=yhjY;gbkey=Gene;gene=yhjY;gene_biotype=protein_coding;locus_tag=AB25_RS05925;old_locus_tag=AB25_4095 NZ_JJMC01000062.1 Protein Homology CDS 37779 38477 . - 0 ID=cds-WP_001296791.1;Parent=gene-AB25_RS05925;Dbxref=GenBank:WP_001296791.1;Name=WP_001296791.1;gbkey=CDS;gene=yhjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709326.2;locus_tag=AB25_RS05925;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_001296791.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 38635 39198 . + . ID=gene-AB25_RS05920;Name=tag;gbkey=Gene;gene=tag;gene_biotype=protein_coding;locus_tag=AB25_RS05920;old_locus_tag=AB25_4096 NZ_JJMC01000062.1 Protein Homology CDS 38635 39198 . + 0 ID=cds-WP_032171414.1;Parent=gene-AB25_RS05920;Dbxref=GenBank:WP_032171414.1;Name=WP_032171414.1;gbkey=CDS;gene=tag;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418005.1;locus_tag=AB25_RS05920;product=DNA-3-methyladenine glycosylase I;protein_id=WP_032171414.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 39195 39635 . + . ID=gene-AB25_RS05915;Name=yiaC;gbkey=Gene;gene=yiaC;gene_biotype=protein_coding;locus_tag=AB25_RS05915;old_locus_tag=AB25_4097 NZ_JJMC01000062.1 Protein Homology CDS 39195 39635 . + 0 ID=cds-WP_000617478.1;Parent=gene-AB25_RS05915;Dbxref=GenBank:WP_000617478.1;Name=WP_000617478.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yiaC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709328.1;locus_tag=AB25_RS05915;product=N-acetyltransferase;protein_id=WP_000617478.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 39604 41937 . - . ID=gene-AB25_RS05910;Name=bisC;gbkey=Gene;gene=bisC;gene_biotype=protein_coding;locus_tag=AB25_RS05910;old_locus_tag=AB25_4098 NZ_JJMC01000062.1 Protein Homology CDS 39604 41937 . - 0 ID=cds-WP_000024005.1;Parent=gene-AB25_RS05910;Dbxref=GenBank:WP_000024005.1;Name=WP_000024005.1;gbkey=CDS;gene=bisC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418007.3;locus_tag=AB25_RS05910;product=biotin sulfoxide reductase;protein_id=WP_000024005.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 42090 42749 . + . ID=gene-AB25_RS05905;Name=yiaD;gbkey=Gene;gene=yiaD;gene_biotype=protein_coding;locus_tag=AB25_RS05905;old_locus_tag=AB25_4099 NZ_JJMC01000062.1 Protein Homology CDS 42090 42749 . + 0 ID=cds-WP_000747625.1;Parent=gene-AB25_RS05905;Dbxref=GenBank:WP_000747625.1;Name=WP_000747625.1;Ontology_term=GO:0009279;gbkey=CDS;gene=yiaD;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312464.1;locus_tag=AB25_RS05905;product=OmpA family lipoprotein;protein_id=WP_000747625.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 42853 43827 . + . ID=gene-AB25_RS05900;Name=ghrB;gbkey=Gene;gene=ghrB;gene_biotype=protein_coding;locus_tag=AB25_RS05900;old_locus_tag=AB25_4100 NZ_JJMC01000062.1 Protein Homology CDS 42853 43827 . + 0 ID=cds-WP_000805027.1;Parent=gene-AB25_RS05900;Dbxref=GenBank:WP_000805027.1;Name=WP_000805027.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=ghrB;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312465.2;locus_tag=AB25_RS05900;product=glyoxylate/hydroxypyruvate reductase GhrB;protein_id=WP_000805027.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 43877 44587 . - . ID=gene-AB25_RS05895;Name=yiaF;gbkey=Gene;gene=yiaF;gene_biotype=protein_coding;locus_tag=AB25_RS05895;old_locus_tag=AB25_4101 NZ_JJMC01000062.1 Protein Homology CDS 43877 44587 . - 0 ID=cds-WP_000190517.1;Parent=gene-AB25_RS05895;Dbxref=GenBank:WP_000190517.1;Name=WP_000190517.1;gbkey=CDS;gene=yiaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418010.2;locus_tag=AB25_RS05895;product=DUF3053 domain-containing protein;protein_id=WP_000190517.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 45021 45311 . + . ID=gene-AB25_RS05890;Name=yiaG;gbkey=Gene;gene=yiaG;gene_biotype=protein_coding;locus_tag=AB25_RS05890;old_locus_tag=AB25_4102 NZ_JJMC01000062.1 Protein Homology CDS 45021 45311 . + 0 ID=cds-WP_000455798.1;Parent=gene-AB25_RS05890;Dbxref=GenBank:WP_000455798.1;Name=WP_000455798.1;gbkey=CDS;gene=yiaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312467.1;locus_tag=AB25_RS05890;product=HTH-type transcriptional regulator;protein_id=WP_000455798.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 45592 45804 . + . ID=gene-AB25_RS05885;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=AB25_RS05885;old_locus_tag=AB25_4103 NZ_JJMC01000062.1 Protein Homology CDS 45592 45804 . + 0 ID=cds-WP_000014594.1;Parent=gene-AB25_RS05885;Dbxref=GenBank:WP_000014594.1;Name=WP_000014594.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312468.1;locus_tag=AB25_RS05885;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000014594.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 45944 46003 . + . ID=gene-AB25_RS32315;Name=AB25_RS32315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32315 NZ_JJMC01000062.1 Protein Homology CDS 45944 46003 . + 0 ID=cds-WP_212591412.1;Parent=gene-AB25_RS32315;Dbxref=GenBank:WP_212591412.1;Name=WP_212591412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051206.1;locus_tag=AB25_RS32315;product=hypothetical protein;protein_id=WP_212591412.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 45992 46144 . - . ID=gene-AB25_RS05880;Name=hokA;gbkey=Gene;gene=hokA;gene_biotype=protein_coding;locus_tag=AB25_RS05880;old_locus_tag=AB25_4104 NZ_JJMC01000062.1 Protein Homology CDS 45992 46144 . - 0 ID=cds-WP_001135738.1;Parent=gene-AB25_RS05880;Dbxref=GenBank:WP_001135738.1;Name=WP_001135738.1;gbkey=CDS;gene=hokA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540334.1;locus_tag=AB25_RS05880;product=type I toxin-antitoxin system toxin HokA;protein_id=WP_001135738.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 46470 48539 . - . ID=gene-AB25_RS05875;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=AB25_RS05875;old_locus_tag=AB25_4105 NZ_JJMC01000062.1 Protein Homology CDS 46470 48539 . - 0 ID=cds-WP_001291774.1;Parent=gene-AB25_RS05875;Dbxref=GenBank:WP_001291774.1;Name=WP_001291774.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=AB25_RS05875;product=glycine--tRNA ligase subunit beta;protein_id=WP_001291774.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 48549 49460 . - . ID=gene-AB25_RS05870;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=AB25_RS05870;old_locus_tag=AB25_4106 NZ_JJMC01000062.1 Protein Homology CDS 48549 49460 . - 0 ID=cds-WP_001168544.1;Parent=gene-AB25_RS05870;Dbxref=GenBank:WP_001168544.1;Name=WP_001168544.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyQ;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312470.1;locus_tag=AB25_RS05870;product=glycine--tRNA ligase subunit alpha;protein_id=WP_001168544.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 49555 49854 . - . ID=gene-AB25_RS05865;Name=ysaB;gbkey=Gene;gene=ysaB;gene_biotype=protein_coding;locus_tag=AB25_RS05865;old_locus_tag=AB25_4107 NZ_JJMC01000062.1 Protein Homology CDS 49555 49854 . - 0 ID=cds-WP_000980111.1;Parent=gene-AB25_RS05865;Dbxref=GenBank:WP_000980111.1;Name=WP_000980111.1;gbkey=CDS;gene=ysaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709347.1;locus_tag=AB25_RS05865;product=YsaB family lipoprotein;protein_id=WP_000980111.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 50029 51024 . + . ID=gene-AB25_RS05860;Name=wecH;gbkey=Gene;gene=wecH;gene_biotype=protein_coding;locus_tag=AB25_RS05860;old_locus_tag=AB25_4108 NZ_JJMC01000062.1 Protein Homology CDS 50029 51024 . + 0 ID=cds-WP_001182653.1;Parent=gene-AB25_RS05860;Dbxref=GenBank:WP_001182653.1;Name=WP_001182653.1;gbkey=CDS;gene=wecH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709348.1;locus_tag=AB25_RS05860;product=O-acetyltransferase WecH;protein_id=WP_001182653.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 51066 51503 . - . ID=gene-AB25_RS05855;Name=yiaA;gbkey=Gene;gene=yiaA;gene_biotype=protein_coding;locus_tag=AB25_RS05855;old_locus_tag=AB25_4109 NZ_JJMC01000062.1 Protein Homology CDS 51066 51503 . - 0 ID=cds-WP_001296808.1;Parent=gene-AB25_RS05855;Dbxref=GenBank:WP_001296808.1;Name=WP_001296808.1;gbkey=CDS;gene=yiaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312472.2;locus_tag=AB25_RS05855;product=inner membrane protein YiaA;protein_id=WP_001296808.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 51549 51890 . - . ID=gene-AB25_RS05850;Name=yiaB;gbkey=Gene;gene=yiaB;gene_biotype=protein_coding;locus_tag=AB25_RS05850;old_locus_tag=AB25_4110 NZ_JJMC01000062.1 Protein Homology CDS 51549 51890 . - 0 ID=cds-WP_000858193.1;Parent=gene-AB25_RS05850;Dbxref=GenBank:WP_000858193.1;Name=WP_000858193.1;gbkey=CDS;gene=yiaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709350.2;locus_tag=AB25_RS05850;product=inner membrane protein YiaB;protein_id=WP_000858193.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 52059 53513 . - . ID=gene-AB25_RS05845;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=AB25_RS05845;old_locus_tag=AB25_4111 NZ_JJMC01000062.1 Protein Homology CDS 52059 53513 . - 0 ID=cds-WP_000275401.1;Parent=gene-AB25_RS05845;Dbxref=GenBank:WP_000275401.1;Name=WP_000275401.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709351.1;locus_tag=AB25_RS05845;product=xylulokinase;protein_id=WP_000275401.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 53585 54907 . - . ID=gene-AB25_RS05840;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=AB25_RS05840;old_locus_tag=AB25_4112 NZ_JJMC01000062.1 Protein Homology CDS 53585 54907 . - 0 ID=cds-WP_001149581.1;Parent=gene-AB25_RS05840;Dbxref=GenBank:WP_001149581.1;Name=WP_001149581.1;Ontology_term=GO:0042732,GO:0009045;gbkey=CDS;gene=xylA;go_function=xylose isomerase activity|0009045||IEA;go_process=D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312475.1;locus_tag=AB25_RS05840;product=xylose isomerase;protein_id=WP_001149581.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 55273 56265 . + . ID=gene-AB25_RS05835;Name=xylF;gbkey=Gene;gene=xylF;gene_biotype=protein_coding;locus_tag=AB25_RS05835;old_locus_tag=AB25_4113 NZ_JJMC01000062.1 Protein Homology CDS 55273 56265 . + 0 ID=cds-WP_001296518.1;Parent=gene-AB25_RS05835;Dbxref=GenBank:WP_001296518.1;Name=WP_001296518.1;Ontology_term=GO:0015753;gbkey=CDS;gene=xylF;go_process=D-xylose transmembrane transport|0015753||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418023.1;locus_tag=AB25_RS05835;product=D-xylose ABC transporter substrate-binding protein;protein_id=WP_001296518.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 56343 57884 . + . ID=gene-AB25_RS05830;Name=xylG;gbkey=Gene;gene=xylG;gene_biotype=protein_coding;locus_tag=AB25_RS05830;old_locus_tag=AB25_4114 NZ_JJMC01000062.1 Protein Homology CDS 56343 57884 . + 0 ID=cds-WP_001146479.1;Parent=gene-AB25_RS05830;Dbxref=GenBank:WP_001146479.1;Name=WP_001146479.1;Ontology_term=GO:0015753,GO:0005524,GO:0015614,GO:0016020;gbkey=CDS;gene=xylG;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-xylose transporter activity|0015614||IEA;go_process=D-xylose transmembrane transport|0015753||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312477.1;locus_tag=AB25_RS05830;product=D-xylose ABC transporter ATP-binding protein;protein_id=WP_001146479.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 57862 59043 . + . ID=gene-AB25_RS05825;Name=xylH;gbkey=Gene;gene=xylH;gene_biotype=protein_coding;locus_tag=AB25_RS05825;old_locus_tag=AB25_4115 NZ_JJMC01000062.1 Protein Homology CDS 57862 59043 . + 0 ID=cds-WP_000045978.1;Parent=gene-AB25_RS05825;Dbxref=GenBank:WP_000045978.1;Name=WP_000045978.1;gbkey=CDS;gene=xylH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312478.1;locus_tag=AB25_RS05825;product=xylose ABC transporter permease XylH;protein_id=WP_000045978.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 59121 60299 . + . ID=gene-AB25_RS05820;Name=xylR;gbkey=Gene;gene=xylR;gene_biotype=protein_coding;locus_tag=AB25_RS05820;old_locus_tag=AB25_4116 NZ_JJMC01000062.1 Protein Homology CDS 59121 60299 . + 0 ID=cds-WP_000494484.1;Parent=gene-AB25_RS05820;Dbxref=GenBank:WP_000494484.1;Name=WP_000494484.1;Note=D-xylose enhances binding of XylR to the xyl promoter and activates transcription.;gbkey=CDS;gene=xylR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312479.1;locus_tag=AB25_RS05820;product=D-xylose utilization transcriptional activator XylR;protein_id=WP_000494484.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 60407 61231 . - . ID=gene-AB25_RS0126285;Name=bax;gbkey=Gene;gene=bax;gene_biotype=protein_coding;locus_tag=AB25_RS0126285;old_locus_tag=AB25_4117 NZ_JJMC01000062.1 Protein Homology CDS 60407 61231 . - 0 ID=cds-WP_001297957.1;Parent=gene-AB25_RS0126285;Dbxref=GenBank:WP_001297957.1;Name=WP_001297957.1;gbkey=CDS;gene=bax;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026230.1;locus_tag=AB25_RS0126285;product=protein bax;protein_id=WP_001297957.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 61551 63581 . + . ID=gene-AB25_RS05815;Name=malS;gbkey=Gene;gene=malS;gene_biotype=protein_coding;locus_tag=AB25_RS05815;old_locus_tag=AB25_4118 NZ_JJMC01000062.1 Protein Homology CDS 61551 63581 . + 0 ID=cds-WP_000761294.1;Parent=gene-AB25_RS05815;Dbxref=GenBank:WP_000761294.1;Name=WP_000761294.1;Ontology_term=GO:0004556;gbkey=CDS;gene=malS;go_function=alpha-amylase activity|0004556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709356.1;locus_tag=AB25_RS05815;product=alpha-amylase;protein_id=WP_000761294.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 63759 65012 . + . ID=gene-AB25_RS05810;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=AB25_RS05810;old_locus_tag=AB25_4119 NZ_JJMC01000062.1 Protein Homology CDS 63759 65012 . + 0 ID=cds-WP_032296143.1;Parent=gene-AB25_RS05810;Dbxref=GenBank:WP_032296143.1;Name=WP_032296143.1;gbkey=CDS;gene=avtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312482.1;locus_tag=AB25_RS05810;product=valine--pyruvate transaminase;protein_id=WP_032296143.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 65163 65636 . - . ID=gene-AB25_RS05805;Name=ysaA;gbkey=Gene;gene=ysaA;gene_biotype=protein_coding;locus_tag=AB25_RS05805;old_locus_tag=AB25_4120 NZ_JJMC01000062.1 Protein Homology CDS 65163 65636 . - 0 ID=cds-WP_001298710.1;Parent=gene-AB25_RS05805;Dbxref=GenBank:WP_001298710.1;Name=WP_001298710.1;gbkey=CDS;gene=ysaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312483.1;locus_tag=AB25_RS05805;product=4Fe-4S binding protein;protein_id=WP_001298710.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 65738 66586 . - . ID=gene-AB25_RS05800;Name=yiaJ;gbkey=Gene;gene=yiaJ;gene_biotype=protein_coding;locus_tag=AB25_RS05800;old_locus_tag=AB25_4121 NZ_JJMC01000062.1 Protein Homology CDS 65738 66586 . - 0 ID=cds-WP_000514233.1;Parent=gene-AB25_RS05800;Dbxref=GenBank:WP_000514233.1;Name=WP_000514233.1;gbkey=CDS;gene=yiaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418031.1;locus_tag=AB25_RS05800;product=IclR family transcriptional regulator YiaJ;protein_id=WP_000514233.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 66787 67785 . + . ID=gene-AB25_RS05795;Name=yiaK;gbkey=Gene;gene=yiaK;gene_biotype=protein_coding;locus_tag=AB25_RS05795;old_locus_tag=AB25_4122 NZ_JJMC01000062.1 Protein Homology CDS 66787 67785 . + 0 ID=cds-WP_000869039.1;Parent=gene-AB25_RS05795;Dbxref=GenBank:WP_000869039.1;Name=WP_000869039.1;Ontology_term=GO:0047559,GO:0070403;gbkey=CDS;gene=yiaK;go_function=3-dehydro-L-gulonate 2-dehydrogenase activity|0047559||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709360.1;locus_tag=AB25_RS05795;product=3-dehydro-L-gulonate 2-dehydrogenase;protein_id=WP_000869039.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 67797 68264 . + . ID=gene-AB25_RS05790;Name=yiaL;gbkey=Gene;gene=yiaL;gene_biotype=protein_coding;locus_tag=AB25_RS05790;old_locus_tag=AB25_4123 NZ_JJMC01000062.1 Protein Homology CDS 67797 68264 . + 0 ID=cds-WP_000576071.1;Parent=gene-AB25_RS05790;Dbxref=GenBank:WP_000576071.1;Name=WP_000576071.1;gbkey=CDS;gene=yiaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418033.1;locus_tag=AB25_RS05790;product=YhcH/YjgK/YiaL family protein;protein_id=WP_000576071.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 68382 68855 . + . ID=gene-AB25_RS05785;Name=yiaM;gbkey=Gene;gene=yiaM;gene_biotype=protein_coding;locus_tag=AB25_RS05785;old_locus_tag=AB25_4124 NZ_JJMC01000062.1 Protein Homology CDS 68382 68855 . + 0 ID=cds-WP_000721664.1;Parent=gene-AB25_RS05785;Dbxref=GenBank:WP_000721664.1;Name=WP_000721664.1;Ontology_term=GO:0031317;gbkey=CDS;gene=yiaM;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418034.1;locus_tag=AB25_RS05785;product=2%2C3-diketo-L-gulonate TRAP transporter small permease YiaM;protein_id=WP_000721664.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 68858 70135 . + . ID=gene-AB25_RS05780;Name=yiaN;gbkey=Gene;gene=yiaN;gene_biotype=protein_coding;locus_tag=AB25_RS05780;old_locus_tag=AB25_4125 NZ_JJMC01000062.1 Protein Homology CDS 68858 70135 . + 0 ID=cds-WP_000279599.1;Parent=gene-AB25_RS05780;Dbxref=GenBank:WP_000279599.1;Name=WP_000279599.1;Ontology_term=GO:0031317;gbkey=CDS;gene=yiaN;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026232.1;locus_tag=AB25_RS05780;product=2%2C3-diketo-L-gulonate TRAP transporter large permease YiaN;protein_id=WP_000279599.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 70148 71134 . + . ID=gene-AB25_RS05775;Name=yiaO;gbkey=Gene;gene=yiaO;gene_biotype=protein_coding;locus_tag=AB25_RS05775;old_locus_tag=AB25_4126 NZ_JJMC01000062.1 Protein Homology CDS 70148 71134 . + 0 ID=cds-WP_000776894.1;Parent=gene-AB25_RS05775;Dbxref=GenBank:WP_000776894.1;Name=WP_000776894.1;gbkey=CDS;gene=yiaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418036.1;locus_tag=AB25_RS05775;product=2%2C3-diketo-L-gulonate TRAP transporter substrate-binding protein YiaO;protein_id=WP_000776894.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 71138 72634 . + . ID=gene-AB25_RS05770;Name=lyxK;gbkey=Gene;gene=lyxK;gene_biotype=protein_coding;locus_tag=AB25_RS05770;old_locus_tag=AB25_4127 NZ_JJMC01000062.1 Protein Homology CDS 71138 72634 . + 0 ID=cds-WP_000196082.1;Parent=gene-AB25_RS05770;Dbxref=GenBank:WP_000196082.1;Name=WP_000196082.1;gbkey=CDS;gene=lyxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418037.1;locus_tag=AB25_RS05770;product=L-xylulokinase;protein_id=WP_000196082.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 72631 73293 . + . ID=gene-AB25_RS05765;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=AB25_RS05765;old_locus_tag=AB25_4128 NZ_JJMC01000062.1 Protein Homology CDS 72631 73293 . + 0 ID=cds-WP_032171421.1;Parent=gene-AB25_RS05765;Dbxref=GenBank:WP_032171421.1;Name=WP_032171421.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418038.1;locus_tag=AB25_RS05765;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_032171421.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 73286 74146 . + . ID=gene-AB25_RS05760;Name=sgbU;gbkey=Gene;gene=sgbU;gene_biotype=protein_coding;locus_tag=AB25_RS05760;old_locus_tag=AB25_4129 NZ_JJMC01000062.1 Protein Homology CDS 73286 74146 . + 0 ID=cds-WP_001323662.1;Parent=gene-AB25_RS05760;Dbxref=GenBank:WP_001323662.1;Name=WP_001323662.1;Ontology_term=GO:0005975,GO:0016861;gbkey=CDS;gene=sgbU;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418039.2;locus_tag=AB25_RS05760;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_001323662.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 74140 74835 . + . ID=gene-AB25_RS05755;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=AB25_RS05755;old_locus_tag=AB25_4130 NZ_JJMC01000062.1 Protein Homology CDS 74140 74835 . + 0 ID=cds-WP_000893123.1;Parent=gene-AB25_RS05755;Dbxref=GenBank:WP_000893123.1;Name=WP_000893123.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418040.1;locus_tag=AB25_RS05755;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_000893123.1;transl_table=11 NZ_JJMC01000062.1 RefSeq pseudogene 74867 74968 . - . ID=gene-AB25_RS32060;Name=AB25_RS32060;end_range=74968,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32060;partial=true;pseudo=true NZ_JJMC01000062.1 Protein Homology CDS 74867 74968 . - 0 ID=cds-AB25_RS32060;Parent=gene-AB25_RS32060;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=74968,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312484.1;locus_tag=AB25_RS32060;partial=true;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 NZ_JJMC01000062.1 RefSeq pseudogene 74972 75160 . + . ID=gene-AB25_RS31390;Name=AB25_RS31390;end_range=75160,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS31390;partial=true;pseudo=true;start_range=.,74972 NZ_JJMC01000062.1 Protein Homology CDS 74972 75160 . + 0 ID=cds-AB25_RS31390;Parent=gene-AB25_RS31390;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=75160,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312486.1;locus_tag=AB25_RS31390;partial=true;product=hypothetical protein;pseudo=true;start_range=.,74972;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 75182 75922 . - . ID=gene-AB25_RS05750;Name=yiaT;gbkey=Gene;gene=yiaT;gene_biotype=protein_coding;locus_tag=AB25_RS05750;old_locus_tag=AB25_4131 NZ_JJMC01000062.1 Protein Homology CDS 75182 75922 . - 0 ID=cds-WP_000906822.1;Parent=gene-AB25_RS05750;Dbxref=GenBank:WP_000906822.1;Name=WP_000906822.1;Ontology_term=GO:0009252,GO:0030674,GO:0009279;gbkey=CDS;gene=yiaT;go_component=cell outer membrane|0009279||IEA;go_function=protein-macromolecule adaptor activity|0030674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312487.1;locus_tag=AB25_RS05750;product=MipA/OmpV family protein;protein_id=WP_000906822.1;transl_table=11 NZ_JJMC01000062.1 RefSeq gene 76046 77020 . + . ID=gene-AB25_RS05745;Name=yiaU;gbkey=Gene;gene=yiaU;gene_biotype=protein_coding;locus_tag=AB25_RS05745;old_locus_tag=AB25_4132 NZ_JJMC01000062.1 Protein Homology CDS 76046 77020 . + 0 ID=cds-WP_000164033.1;Parent=gene-AB25_RS05745;Dbxref=GenBank:WP_000164033.1;Name=WP_000164033.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=yiaU;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312488.1;locus_tag=AB25_RS05745;product=LysR family transcriptional regulator;protein_id=WP_000164033.1;transl_table=11 NZ_JJMC01000062.1 RefSeq pseudogene 77017 77793 . - . ID=gene-AB25_RS05740;Name=AB25_RS05740;end_range=77793,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS05740;old_locus_tag=AB25_4133;partial=true;pseudo=true NZ_JJMC01000062.1 Protein Homology CDS 77017 77793 . - 0 ID=cds-AB25_RS05740;Parent=gene-AB25_RS05740;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0016020;end_range=77793,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418043.1;locus_tag=AB25_RS05740;partial=true;product=HlyD family secretion protein;pseudo=true;transl_table=11 NZ_JJMC01000062.1 RefSeq pseudogene 77849 78380 . + . ID=gene-AB25_RS30615;Name=AB25_RS30615;end_range=78380,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS30615;partial=true;pseudo=true NZ_JJMC01000062.1 Protein Homology CDS 77849 78380 . + 0 ID=cds-AB25_RS30615;Parent=gene-AB25_RS30615;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=78380,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB25_RS30615;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJMC01000063.1 1 9732 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000063.1 RefSeq region 1 9732 . + . ID=NZ_JJMC01000063.1:1..9732;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000063.1 RefSeq pseudogene 1 540 . + . ID=gene-AB25_RS29075;Name=AB25_RS29075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS29075;old_locus_tag=AB25_4135;partial=true;pseudo=true;start_range=.,1 NZ_JJMC01000063.1 Protein Homology CDS 1 540 . + 1 ID=cds-AB25_RS29075;Parent=gene-AB25_RS29075;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AB25_RS29075;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJMC01000063.1 RefSeq pseudogene 556 924 . - . ID=gene-AB25_RS0126315;Name=AB25_RS0126315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS0126315;partial=true;pseudo=true;start_range=.,556 NZ_JJMC01000063.1 Protein Homology CDS 556 924 . - 0 ID=cds-AB25_RS0126315;Parent=gene-AB25_RS0126315;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312489.1;locus_tag=AB25_RS0126315;partial=true;product=biotin/lipoyl-binding protein;pseudo=true;start_range=.,556;transl_table=11 NZ_JJMC01000063.1 RefSeq gene 930 1253 . - . ID=gene-AB25_RS05730;Name=yiaW;gbkey=Gene;gene=yiaW;gene_biotype=protein_coding;locus_tag=AB25_RS05730;old_locus_tag=AB25_4136 NZ_JJMC01000063.1 Protein Homology CDS 930 1253 . - 0 ID=cds-WP_000478193.1;Parent=gene-AB25_RS05730;Dbxref=GenBank:WP_000478193.1;Name=WP_000478193.1;gbkey=CDS;gene=yiaW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312490.1;locus_tag=AB25_RS05730;product=DUF3302 domain-containing protein;protein_id=WP_000478193.1;transl_table=11 NZ_JJMC01000063.1 RefSeq gene 1376 1579 . + . ID=gene-AB25_RS0126320;Name=AB25_RS0126320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0126320;old_locus_tag=AB25_4137 NZ_JJMC01000063.1 GeneMarkS-2+ CDS 1376 1579 . + 0 ID=cds-WP_000885436.1;Parent=gene-AB25_RS0126320;Dbxref=GenBank:WP_000885436.1;Name=WP_000885436.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB25_RS0126320;product=hypothetical protein;protein_id=WP_000885436.1;transl_table=11 NZ_JJMC01000063.1 RefSeq gene 1798 3336 . - . ID=gene-AB25_RS05725;Name=aldB;gbkey=Gene;gene=aldB;gene_biotype=protein_coding;locus_tag=AB25_RS05725;old_locus_tag=AB25_4138 NZ_JJMC01000063.1 Protein Homology CDS 1798 3336 . - 0 ID=cds-WP_000183978.1;Parent=gene-AB25_RS05725;Dbxref=GenBank:WP_000183978.1;Name=WP_000183978.1;gbkey=CDS;gene=aldB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551836.1;locus_tag=AB25_RS05725;product=aldehyde dehydrogenase AldB;protein_id=WP_000183978.1;transl_table=11 NZ_JJMC01000063.1 RefSeq gene 3501 4652 . - . ID=gene-AB25_RS05720;Name=yiaY;gbkey=Gene;gene=yiaY;gene_biotype=protein_coding;locus_tag=AB25_RS05720;old_locus_tag=AB25_4139 NZ_JJMC01000063.1 Protein Homology CDS 3501 4652 . - 0 ID=cds-WP_000168712.1;Parent=gene-AB25_RS05720;Dbxref=GenBank:WP_000168712.1;Name=WP_000168712.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yiaY;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312493.1;locus_tag=AB25_RS05720;product=L-threonine dehydrogenase;protein_id=WP_000168712.1;transl_table=11 NZ_JJMC01000063.1 RefSeq gene 4842 6686 . - . ID=gene-AB25_RS05715;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=AB25_RS05715;old_locus_tag=AB25_4140 NZ_JJMC01000063.1 Protein Homology CDS 4842 6686 . - 0 ID=cds-WP_000582465.1;Parent=gene-AB25_RS05715;Dbxref=GenBank:WP_000582465.1;Name=WP_000582465.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=selB;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418047.1;locus_tag=AB25_RS05715;product=selenocysteine-specific translation elongation factor;protein_id=WP_000582465.1;transl_table=11 NZ_JJMC01000063.1 RefSeq gene 6683 8074 . - . ID=gene-AB25_RS05710;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=AB25_RS05710;old_locus_tag=AB25_4141 NZ_JJMC01000063.1 Protein Homology CDS 6683 8074 . - 0 ID=cds-WP_000206275.1;Parent=gene-AB25_RS05710;Dbxref=GenBank:WP_000206275.1;Name=WP_000206275.1;Ontology_term=GO:0001514,GO:0004125,GO:0005737;gbkey=CDS;gene=selA;go_component=cytoplasm|0005737||IEA;go_function=L-seryl-tRNA(Sec) selenium transferase activity|0004125||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312495.1;locus_tag=AB25_RS05710;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_000206275.1;transl_table=11 NZ_JJMC01000063.1 RefSeq gene 8172 8780 . - . ID=gene-AB25_RS05705;Name=yibF;gbkey=Gene;gene=yibF;gene_biotype=protein_coding;locus_tag=AB25_RS05705;old_locus_tag=AB25_4142 NZ_JJMC01000063.1 Protein Homology CDS 8172 8780 . - 0 ID=cds-WP_000779792.1;Parent=gene-AB25_RS05705;Dbxref=GenBank:WP_000779792.1;Name=WP_000779792.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yibF;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418049.1;locus_tag=AB25_RS05705;product=glutathione S-transferase;protein_id=WP_000779792.1;transl_table=11 NZ_JJMC01000063.1 RefSeq gene 9009 9732 . + . ID=gene-AB25_RS05700;Name=AB25_RS05700;end_range=9732,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS05700;old_locus_tag=AB25_4144;partial=true NZ_JJMC01000063.1 Protein Homology CDS 9009 9732 . + 0 ID=cds-WP_032296145.1;Parent=gene-AB25_RS05700;Dbxref=GenBank:WP_032296145.1;Name=WP_032296145.1;end_range=9732,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418050.1;locus_tag=AB25_RS05700;partial=true;product=DUF6531 domain-containing protein;protein_id=WP_032296145.1;transl_table=11 ##sequence-region NZ_JJMC01000064.1 1 12914 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000064.1 RefSeq region 1 12914 . + . ID=NZ_JJMC01000064.1:1..12914;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000064.1 RefSeq gene 1 892 . + . ID=gene-AB25_RS0126325;Name=AB25_RS0126325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0126325;partial=true;start_range=.,1 NZ_JJMC01000064.1 Protein Homology CDS 1 892 . + 1 ID=cds-WP_032196484.1;Parent=gene-AB25_RS0126325;Dbxref=GenBank:WP_032196484.1;Name=WP_032196484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312497.1;locus_tag=AB25_RS0126325;partial=true;product=RHS repeat-associated core domain-containing protein;protein_id=WP_032196484.1;start_range=.,1;transl_table=11 NZ_JJMC01000064.1 RefSeq gene 904 1365 . + . ID=gene-AB25_RS0126330;Name=yibG;gbkey=Gene;gene=yibG;gene_biotype=protein_coding;locus_tag=AB25_RS0126330 NZ_JJMC01000064.1 Protein Homology CDS 904 1365 . + 0 ID=cds-WP_000642489.1;Parent=gene-AB25_RS0126330;Dbxref=GenBank:WP_000642489.1;Name=WP_000642489.1;gbkey=CDS;gene=yibG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418053.1;locus_tag=AB25_RS0126330;product=sel1 repeat family protein;protein_id=WP_000642489.1;transl_table=11 NZ_JJMC01000064.1 RefSeq pseudogene 1399 1617 . + . ID=gene-AB25_RS32995;Name=AB25_RS32995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32995;partial=true;pseudo=true;start_range=.,1399 NZ_JJMC01000064.1 Protein Homology CDS 1399 1617 . + 0 ID=cds-AB25_RS32995;Parent=gene-AB25_RS32995;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308756.1;locus_tag=AB25_RS32995;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,1399;transl_table=11 NZ_JJMC01000064.1 RefSeq pseudogene 1989 2509 . + . ID=gene-AB25_RS0126335;Name=AB25_RS0126335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS0126335;pseudo=true NZ_JJMC01000064.1 Protein Homology CDS 1989 2509 . + 0 ID=cds-AB25_RS0126335;Parent=gene-AB25_RS0126335;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001626253.1;locus_tag=AB25_RS0126335;product=Imm57 family immunity protein;pseudo=true;transl_table=11 NZ_JJMC01000064.1 RefSeq gene 2969 4105 . - . ID=gene-AB25_RS05695;Name=yibH;gbkey=Gene;gene=yibH;gene_biotype=protein_coding;locus_tag=AB25_RS05695;old_locus_tag=AB25_4146 NZ_JJMC01000064.1 Protein Homology CDS 2969 4105 . - 0 ID=cds-WP_000364939.1;Parent=gene-AB25_RS05695;Dbxref=GenBank:WP_000364939.1;Name=WP_000364939.1;gbkey=CDS;gene=yibH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312500.1;locus_tag=AB25_RS05695;product=HlyD family secretion protein;protein_id=WP_000364939.1;transl_table=11 NZ_JJMC01000064.1 RefSeq gene 4108 4470 . - . ID=gene-AB25_RS05690;Name=yibI;gbkey=Gene;gene=yibI;gene_biotype=protein_coding;locus_tag=AB25_RS05690;old_locus_tag=AB25_4147 NZ_JJMC01000064.1 Protein Homology CDS 4108 4470 . - 0 ID=cds-WP_000479626.1;Parent=gene-AB25_RS05690;Dbxref=GenBank:WP_000479626.1;Name=WP_000479626.1;gbkey=CDS;gene=yibI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312501.1;locus_tag=AB25_RS05690;product=DUF3302 domain-containing protein;protein_id=WP_000479626.1;transl_table=11 NZ_JJMC01000064.1 RefSeq gene 5007 6920 . + . ID=gene-AB25_RS05685;Name=mtlA;gbkey=Gene;gene=mtlA;gene_biotype=protein_coding;locus_tag=AB25_RS05685;old_locus_tag=AB25_4148 NZ_JJMC01000064.1 Protein Homology CDS 5007 6920 . + 0 ID=cds-WP_000093258.1;Parent=gene-AB25_RS05685;Dbxref=GenBank:WP_000093258.1;Name=WP_000093258.1;gbkey=CDS;gene=mtlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709373.1;locus_tag=AB25_RS05685;product=PTS mannitol transporter subunit IICBA;protein_id=WP_000093258.1;transl_table=11 NZ_JJMC01000064.1 RefSeq gene 7150 8298 . + . ID=gene-AB25_RS05680;Name=mtlD;gbkey=Gene;gene=mtlD;gene_biotype=protein_coding;locus_tag=AB25_RS05680;old_locus_tag=AB25_4149 NZ_JJMC01000064.1 Protein Homology CDS 7150 8298 . + 0 ID=cds-WP_000645430.1;Parent=gene-AB25_RS05680;Dbxref=GenBank:WP_000645430.1;Name=WP_000645430.1;Ontology_term=GO:0019594,GO:0008926;gbkey=CDS;gene=mtlD;go_function=mannitol-1-phosphate 5-dehydrogenase activity|0008926||IEA;go_process=mannitol metabolic process|0019594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709374.2;locus_tag=AB25_RS05680;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_000645430.1;transl_table=11 NZ_JJMC01000064.1 RefSeq gene 8298 8885 . + . ID=gene-AB25_RS05675;Name=mtlR;gbkey=Gene;gene=mtlR;gene_biotype=protein_coding;locus_tag=AB25_RS05675;old_locus_tag=AB25_4150 NZ_JJMC01000064.1 Protein Homology CDS 8298 8885 . + 0 ID=cds-WP_000228271.1;Parent=gene-AB25_RS05675;Dbxref=GenBank:WP_000228271.1;Name=WP_000228271.1;gbkey=CDS;gene=mtlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312504.1;locus_tag=AB25_RS05675;product=mannitol operon repressor MtlR;protein_id=WP_000228271.1;transl_table=11 NZ_JJMC01000064.1 RefSeq gene 8897 9106 . - . ID=gene-AB25_RS05670;Name=yibT;gbkey=Gene;gene=yibT;gene_biotype=protein_coding;locus_tag=AB25_RS05670;old_locus_tag=AB25_4151 NZ_JJMC01000064.1 Protein Homology CDS 8897 9106 . - 0 ID=cds-WP_000517100.1;Parent=gene-AB25_RS05670;Dbxref=GenBank:WP_000517100.1;Name=WP_000517100.1;gbkey=CDS;gene=yibT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588470.1;locus_tag=AB25_RS05670;product=protein YibT;protein_id=WP_000517100.1;transl_table=11 NZ_JJMC01000064.1 RefSeq gene 9391 9753 . + . ID=gene-AB25_RS05665;Name=yibL;gbkey=Gene;gene=yibL;gene_biotype=protein_coding;locus_tag=AB25_RS05665;old_locus_tag=AB25_4152 NZ_JJMC01000064.1 Protein Homology CDS 9391 9753 . + 0 ID=cds-WP_000665680.1;Parent=gene-AB25_RS05665;Dbxref=GenBank:WP_000665680.1;Name=WP_000665680.1;gbkey=CDS;gene=yibL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312505.1;locus_tag=AB25_RS05665;product=YibL family ribosome-associated protein;protein_id=WP_000665680.1;transl_table=11 NZ_JJMC01000064.1 RefSeq gene 10296 10979 . + . ID=gene-AB25_RS05660;Name=AB25_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS05660;old_locus_tag=AB25_4153 NZ_JJMC01000064.1 Protein Homology CDS 10296 10979 . + 0 ID=cds-WP_001049539.1;Parent=gene-AB25_RS05660;Dbxref=GenBank:WP_001049539.1;Name=WP_001049539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001049551.1;locus_tag=AB25_RS05660;product=DUF3251 domain-containing protein;protein_id=WP_001049539.1;transl_table=11 NZ_JJMC01000064.1 RefSeq gene 11023 12914 . + . ID=gene-AB25_RS05655;Name=AB25_RS05655;end_range=12914,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS05655;old_locus_tag=AB25_4154;partial=true NZ_JJMC01000064.1 Protein Homology CDS 11023 12914 . + 0 ID=cds-WP_024227618.1;Parent=gene-AB25_RS05655;Dbxref=GenBank:WP_024227618.1;Name=WP_024227618.1;end_range=12914,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312507.1;locus_tag=AB25_RS05655;partial=true;product=ESPR-type extended signal peptide-containing protein;protein_id=WP_024227618.1;transl_table=11 ##sequence-region NZ_JJMC01000065.1 1 64816 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000065.1 RefSeq region 1 64816 . + . ID=NZ_JJMC01000065.1:1..64816;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000065.1 RefSeq gene 1 4826 . + . ID=gene-AB25_RS05650;Name=AB25_RS05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS05650;old_locus_tag=AB25_4155;partial=true;start_range=.,1 NZ_JJMC01000065.1 Protein Homology CDS 1 4826 . + 2 ID=cds-WP_050442710.1;Parent=gene-AB25_RS05650;Dbxref=GenBank:WP_050442710.1;Name=WP_050442710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001555241.1;locus_tag=AB25_RS05650;partial=true;product=YadA-like family protein;protein_id=WP_050442710.1;start_range=.,1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 5194 6849 . + . ID=gene-AB25_RS05645;Name=lldP;gbkey=Gene;gene=lldP;gene_biotype=protein_coding;locus_tag=AB25_RS05645;old_locus_tag=AB25_4156 NZ_JJMC01000065.1 Protein Homology CDS 5194 6849 . + 0 ID=cds-WP_001297977.1;Parent=gene-AB25_RS05645;Dbxref=GenBank:WP_001297977.1;Name=WP_001297977.1;Ontology_term=GO:0015727,GO:0015129,GO:0005886;gbkey=CDS;gene=lldP;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312508.1;locus_tag=AB25_RS05645;product=L-lactate permease;protein_id=WP_001297977.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 6849 7625 . + . ID=gene-AB25_RS05640;Name=lldR;gbkey=Gene;gene=lldR;gene_biotype=protein_coding;locus_tag=AB25_RS05640;old_locus_tag=AB25_4157 NZ_JJMC01000065.1 Protein Homology CDS 6849 7625 . + 0 ID=cds-WP_000636500.1;Parent=gene-AB25_RS05640;Dbxref=GenBank:WP_000636500.1;Name=WP_000636500.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lldR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418061.1;locus_tag=AB25_RS05640;product=transcriptional regulator LldR;protein_id=WP_000636500.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 7622 8812 . + . ID=gene-AB25_RS05635;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=AB25_RS05635;old_locus_tag=AB25_4158 NZ_JJMC01000065.1 Protein Homology CDS 7622 8812 . + 0 ID=cds-WP_000586977.1;Parent=gene-AB25_RS05635;Dbxref=GenBank:WP_000586977.1;Name=WP_000586977.1;gbkey=CDS;gene=lldD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312510.1;locus_tag=AB25_RS05635;product=quinone-dependent L-lactate dehydrogenase;protein_id=WP_000586977.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 8998 9471 . + . ID=gene-AB25_RS05630;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=AB25_RS05630;old_locus_tag=AB25_4159 NZ_JJMC01000065.1 Protein Homology CDS 8998 9471 . + 0 ID=cds-WP_000932346.1;Parent=gene-AB25_RS05630;Dbxref=GenBank:WP_000932346.1;Name=WP_000932346.1;Ontology_term=GO:0001510,GO:0008173;gbkey=CDS;gene=trmL;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709385.1;locus_tag=AB25_RS05630;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_000932346.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 9524 10345 . - . ID=gene-AB25_RS05625;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=AB25_RS05625;old_locus_tag=AB25_4160 NZ_JJMC01000065.1 Protein Homology CDS 9524 10345 . - 0 ID=cds-WP_001277561.1;Parent=gene-AB25_RS05625;Dbxref=GenBank:WP_001277561.1;Name=WP_001277561.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112113.1;locus_tag=AB25_RS05625;product=serine O-acetyltransferase;protein_id=WP_001277561.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 10425 11444 . - . ID=gene-AB25_RS05620;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=AB25_RS05620;old_locus_tag=AB25_4161 NZ_JJMC01000065.1 Protein Homology CDS 10425 11444 . - 0 ID=cds-WP_001076194.1;Parent=gene-AB25_RS05620;Dbxref=GenBank:WP_001076194.1;Name=WP_001076194.1;Ontology_term=GO:0006072,GO:0047952;gbkey=CDS;gene=gpsA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312513.1;locus_tag=AB25_RS05620;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_001076194.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 11444 11911 . - . ID=gene-AB25_RS05615;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=AB25_RS05615;old_locus_tag=AB25_4162 NZ_JJMC01000065.1 Protein Homology CDS 11444 11911 . - 0 ID=cds-WP_000003377.1;Parent=gene-AB25_RS05615;Dbxref=GenBank:WP_000003377.1;Name=WP_000003377.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015369180.1;locus_tag=AB25_RS05615;product=protein-export chaperone SecB;protein_id=WP_000003377.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 11974 12225 . - . ID=gene-AB25_RS05610;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=AB25_RS05610;old_locus_tag=AB25_4163 NZ_JJMC01000065.1 Protein Homology CDS 11974 12225 . - 0 ID=cds-WP_000024392.1;Parent=gene-AB25_RS05610;Dbxref=GenBank:WP_000024392.1;Name=WP_000024392.1;gbkey=CDS;gene=grxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312515.1;locus_tag=AB25_RS05610;product=glutaredoxin 3;protein_id=WP_000024392.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 12367 12798 . - . ID=gene-AB25_RS05605;Name=yibN;gbkey=Gene;gene=yibN;gene_biotype=protein_coding;locus_tag=AB25_RS05605;old_locus_tag=AB25_4164 NZ_JJMC01000065.1 Protein Homology CDS 12367 12798 . - 0 ID=cds-WP_001156181.1;Parent=gene-AB25_RS05605;Dbxref=GenBank:WP_001156181.1;Name=WP_001156181.1;gbkey=CDS;gene=yibN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312516.1;locus_tag=AB25_RS05605;product=rhodanese-like domain-containing protein;protein_id=WP_001156181.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 13043 14587 . + . ID=gene-AB25_RS05600;Name=gpmM;gbkey=Gene;gene=gpmM;gene_biotype=protein_coding;gene_synonym=pgmI;locus_tag=AB25_RS05600;old_locus_tag=AB25_4165 NZ_JJMC01000065.1 Protein Homology CDS 13043 14587 . + 0 ID=cds-WP_000116565.1;Parent=gene-AB25_RS05600;Dbxref=GenBank:WP_000116565.1;Name=WP_000116565.1;Ontology_term=GO:0006007,GO:0004619;gbkey=CDS;gene=gpmM;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glucose catabolic process|0006007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312517.1;locus_tag=AB25_RS05600;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_000116565.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 14621 15880 . + . ID=gene-AB25_RS05595;Name=envC;gbkey=Gene;gene=envC;gene_biotype=protein_coding;locus_tag=AB25_RS05595;old_locus_tag=AB25_4166 NZ_JJMC01000065.1 Protein Homology CDS 14621 15880 . + 0 ID=cds-WP_000196256.1;Parent=gene-AB25_RS05595;Dbxref=GenBank:WP_000196256.1;Name=WP_000196256.1;gbkey=CDS;gene=envC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418070.6;locus_tag=AB25_RS05595;product=murein hydrolase activator EnvC;protein_id=WP_000196256.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 15884 16843 . + . ID=gene-AB25_RS05590;Name=yibQ;gbkey=Gene;gene=yibQ;gene_biotype=protein_coding;locus_tag=AB25_RS05590;old_locus_tag=AB25_4167 NZ_JJMC01000065.1 Protein Homology CDS 15884 16843 . + 0 ID=cds-WP_000483856.1;Parent=gene-AB25_RS05590;Dbxref=GenBank:WP_000483856.1;Name=WP_000483856.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;gene=yibQ;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312519.2;locus_tag=AB25_RS05590;product=divergent polysaccharide deacetylase family protein;protein_id=WP_000483856.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 16830 17864 . - . ID=gene-AB25_RS05585;Name=waaH;gbkey=Gene;gene=waaH;gene_biotype=protein_coding;locus_tag=AB25_RS05585;old_locus_tag=AB25_4168 NZ_JJMC01000065.1 Protein Homology CDS 16830 17864 . - 0 ID=cds-WP_000982091.1;Parent=gene-AB25_RS05585;Dbxref=GenBank:WP_000982091.1;Name=WP_000982091.1;gbkey=CDS;gene=waaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418072.1;locus_tag=AB25_RS05585;product=UDP-glucuronate:LPS(HepIII) glycosyltransferase;protein_id=WP_000982091.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 18103 19128 . - . ID=gene-AB25_RS05580;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=AB25_RS05580;old_locus_tag=AB25_4169 NZ_JJMC01000065.1 Protein Homology CDS 18103 19128 . - 0 ID=cds-WP_000646014.1;Parent=gene-AB25_RS05580;Dbxref=GenBank:WP_000646014.1;Name=WP_000646014.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120462.1;locus_tag=AB25_RS05580;product=L-threonine 3-dehydrogenase;protein_id=WP_000646014.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 19138 20334 . - . ID=gene-AB25_RS05575;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=AB25_RS05575;old_locus_tag=AB25_4170 NZ_JJMC01000065.1 Protein Homology CDS 19138 20334 . - 0 ID=cds-WP_001213834.1;Parent=gene-AB25_RS05575;Dbxref=GenBank:WP_001213834.1;Name=WP_001213834.1;Ontology_term=GO:0006567,GO:0008890;gbkey=CDS;gene=kbl;go_function=glycine C-acetyltransferase activity|0008890||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239151.1;locus_tag=AB25_RS05575;product=glycine C-acetyltransferase;protein_id=WP_001213834.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 20548 21480 . + . ID=gene-AB25_RS05570;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=AB25_RS05570;old_locus_tag=AB25_4171 NZ_JJMC01000065.1 Protein Homology CDS 20548 21480 . + 0 ID=cds-WP_000587749.1;Parent=gene-AB25_RS05570;Dbxref=GenBank:WP_000587749.1;Name=WP_000587749.1;Ontology_term=GO:0005975,GO:0008712;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233050.1;locus_tag=AB25_RS05570;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_000587749.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 21490 22536 . + . ID=gene-AB25_RS05565;Name=rfaF;gbkey=Gene;gene=rfaF;gene_biotype=protein_coding;locus_tag=AB25_RS05565;old_locus_tag=AB25_4172 NZ_JJMC01000065.1 Protein Homology CDS 21490 22536 . + 0 ID=cds-WP_000699225.1;Parent=gene-AB25_RS05565;Dbxref=GenBank:WP_000699225.1;Name=WP_000699225.1;Ontology_term=GO:0009103,GO:0016757;gbkey=CDS;gene=rfaF;go_function=glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709400.1;locus_tag=AB25_RS05565;product=ADP-heptose--LPS heptosyltransferase RfaF;protein_id=WP_000699225.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 22540 23511 . + . ID=gene-AB25_RS05560;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=AB25_RS05560;old_locus_tag=AB25_4173 NZ_JJMC01000065.1 Protein Homology CDS 22540 23511 . + 0 ID=cds-WP_001264572.1;Parent=gene-AB25_RS05560;Dbxref=GenBank:WP_001264572.1;Name=WP_001264572.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=rfaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016244006.1;locus_tag=AB25_RS05560;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=WP_001264572.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 23581 24834 . - . ID=gene-AB25_RS05555;Name=AB25_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS05555;old_locus_tag=AB25_4174 NZ_JJMC01000065.1 Protein Homology CDS 23581 24834 . - 0 ID=cds-WP_001300719.1;Parent=gene-AB25_RS05555;Dbxref=GenBank:WP_001300719.1;Name=WP_001300719.1;Ontology_term=GO:0009103,GO:0008754,GO:0008755,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=O-antigen ligase activity|0008754||IEA,O antigen polymerase activity|0008755||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012602581.1;locus_tag=AB25_RS05555;product=O-antigen ligase family protein;protein_id=WP_001300719.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 24880 25863 . - . ID=gene-AB25_RS05550;Name=AB25_RS05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS05550;old_locus_tag=AB25_4175 NZ_JJMC01000065.1 Protein Homology CDS 24880 25863 . - 0 ID=cds-WP_000063997.1;Parent=gene-AB25_RS05550;Dbxref=GenBank:WP_000063997.1;Name=WP_000063997.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016246416.1;locus_tag=AB25_RS05550;product=glycosyltransferase family 2 protein;protein_id=WP_000063997.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 25948 26973 . - . ID=gene-AB25_RS05545;Name=AB25_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS05545;old_locus_tag=AB25_4176 NZ_JJMC01000065.1 Protein Homology CDS 25948 26973 . - 0 ID=cds-WP_032171442.1;Parent=gene-AB25_RS05545;Dbxref=GenBank:WP_032171442.1;Name=WP_032171442.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000364797.1;locus_tag=AB25_RS05545;product=glycosyltransferase family 8 protein;protein_id=WP_032171442.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 26999 27691 . - . ID=gene-AB25_RS05540;Name=rfaY;gbkey=Gene;gene=rfaY;gene_biotype=protein_coding;locus_tag=AB25_RS05540;old_locus_tag=AB25_4177 NZ_JJMC01000065.1 Protein Homology CDS 26999 27691 . - 0 ID=cds-WP_000633087.1;Parent=gene-AB25_RS05540;Dbxref=GenBank:WP_000633087.1;Name=WP_000633087.1;gbkey=CDS;gene=rfaY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000633080.1;locus_tag=AB25_RS05540;product=lipopolysaccharide core heptose(II) kinase RfaY;protein_id=WP_000633087.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 27701 28696 . - . ID=gene-AB25_RS05535;Name=AB25_RS05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS05535;old_locus_tag=AB25_4178 NZ_JJMC01000065.1 Protein Homology CDS 27701 28696 . - 0 ID=cds-WP_001001724.1;Parent=gene-AB25_RS05535;Dbxref=GenBank:WP_001001724.1;Name=WP_001001724.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001001722.1;locus_tag=AB25_RS05535;product=glycosyltransferase family 8 protein;protein_id=WP_001001724.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 28713 29729 . - . ID=gene-AB25_RS05530;Name=waaO;gbkey=Gene;gene=waaO;gene_biotype=protein_coding;gene_synonym=rfaI;locus_tag=AB25_RS05530;old_locus_tag=AB25_4179 NZ_JJMC01000065.1 Protein Homology CDS 28713 29729 . - 0 ID=cds-WP_032171444.1;Parent=gene-AB25_RS05530;Dbxref=GenBank:WP_032171444.1;Name=WP_032171444.1;Ontology_term=GO:0009103,GO:0008918;gbkey=CDS;gene=waaO;go_function=lipopolysaccharide 3-alpha-galactosyltransferase activity|0008918||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540083.1;locus_tag=AB25_RS05530;product=lipopolysaccharide 3-alpha-galactosyltransferase;protein_id=WP_032171444.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 29745 30542 . - . ID=gene-AB25_RS05525;Name=rfaP;gbkey=Gene;gene=rfaP;gene_biotype=protein_coding;locus_tag=AB25_RS05525;old_locus_tag=AB25_4180 NZ_JJMC01000065.1 Protein Homology CDS 29745 30542 . - 0 ID=cds-WP_001295235.1;Parent=gene-AB25_RS05525;Dbxref=GenBank:WP_001295235.1;Name=WP_001295235.1;Ontology_term=GO:0009103,GO:0016301;gbkey=CDS;gene=rfaP;go_function=kinase activity|0016301||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312532.2;locus_tag=AB25_RS05525;product=lipopolysaccharide core heptose(I) kinase RfaP;protein_id=WP_001295235.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 30535 31659 . - . ID=gene-AB25_RS05520;Name=waaG;gbkey=Gene;gene=waaG;gene_biotype=protein_coding;locus_tag=AB25_RS05520;old_locus_tag=AB25_4181 NZ_JJMC01000065.1 Protein Homology CDS 30535 31659 . - 0 ID=cds-WP_000634246.1;Parent=gene-AB25_RS05520;Dbxref=GenBank:WP_000634246.1;Name=WP_000634246.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;gene=waaG;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312533.1;locus_tag=AB25_RS05520;product=glycosyltransferase family 4 protein;protein_id=WP_000634246.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 31656 32714 . - . ID=gene-AB25_RS05515;Name=rfaQ;gbkey=Gene;gene=rfaQ;gene_biotype=protein_coding;locus_tag=AB25_RS05515;old_locus_tag=AB25_4182 NZ_JJMC01000065.1 Protein Homology CDS 31656 32714 . - 0 ID=cds-WP_000360402.1;Parent=gene-AB25_RS05515;Dbxref=GenBank:WP_000360402.1;Name=WP_000360402.1;Ontology_term=GO:0016757;gbkey=CDS;gene=rfaQ;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709409.1;locus_tag=AB25_RS05515;product=lipopolysaccharide core heptosyltransferase RfaQ;protein_id=WP_000360402.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 33127 34404 . + . ID=gene-AB25_RS05510;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=AB25_RS05510;old_locus_tag=AB25_4183 NZ_JJMC01000065.1 Protein Homology CDS 33127 34404 . + 0 ID=cds-WP_000891564.1;Parent=gene-AB25_RS05510;Dbxref=GenBank:WP_000891564.1;Name=WP_000891564.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312535.1;locus_tag=AB25_RS05510;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_000891564.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 34412 34891 . + . ID=gene-AB25_RS05505;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=AB25_RS05505;old_locus_tag=AB25_4184 NZ_JJMC01000065.1 Protein Homology CDS 34412 34891 . + 0 ID=cds-WP_001171866.1;Parent=gene-AB25_RS05505;Dbxref=GenBank:WP_001171866.1;Name=WP_001171866.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312536.1;locus_tag=AB25_RS05505;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_001171866.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 34930 35739 . - . ID=gene-AB25_RS05500;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=AB25_RS05500;old_locus_tag=AB25_4185 NZ_JJMC01000065.1 Protein Homology CDS 34930 35739 . - 0 ID=cds-WP_001114533.1;Parent=gene-AB25_RS05500;Dbxref=GenBank:WP_001114533.1;Name=WP_001114533.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312537.1;locus_tag=AB25_RS05500;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_001114533.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 35837 36004 . - . ID=gene-AB25_RS05495;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=AB25_RS05495;old_locus_tag=AB25_4186 NZ_JJMC01000065.1 Protein Homology CDS 35837 36004 . - 0 ID=cds-WP_001051798.1;Parent=gene-AB25_RS05495;Dbxref=GenBank:WP_001051798.1;Name=WP_001051798.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=AB25_RS05495;product=50S ribosomal protein L33;protein_id=WP_001051798.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 36025 36261 . - . ID=gene-AB25_RS05490;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=AB25_RS05490;old_locus_tag=AB25_4187 NZ_JJMC01000065.1 Protein Homology CDS 36025 36261 . - 0 ID=cds-WP_000091955.1;Parent=gene-AB25_RS05490;Dbxref=GenBank:WP_000091955.1;Name=WP_000091955.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=AB25_RS05490;product=50S ribosomal protein L28;protein_id=WP_000091955.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 36478 37146 . - . ID=gene-AB25_RS05485;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=AB25_RS05485;old_locus_tag=AB25_4188 NZ_JJMC01000065.1 Protein Homology CDS 36478 37146 . - 0 ID=cds-WP_001297375.1;Parent=gene-AB25_RS05485;Dbxref=GenBank:WP_001297375.1;Name=WP_001297375.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709417.4;locus_tag=AB25_RS05485;product=RadC family protein;protein_id=WP_001297375.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 37318 38538 . + . ID=gene-AB25_RS05480;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=AB25_RS05480;old_locus_tag=AB25_4189 NZ_JJMC01000065.1 Protein Homology CDS 37318 38538 . + 0 ID=cds-WP_000050158.1;Parent=gene-AB25_RS05480;Dbxref=GenBank:WP_000050158.1;Name=WP_000050158.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418096.4;locus_tag=AB25_RS05480;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_000050158.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 38516 38974 . + . ID=gene-AB25_RS05475;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=AB25_RS05475;old_locus_tag=AB25_4190 NZ_JJMC01000065.1 Protein Homology CDS 38516 38974 . + 0 ID=cds-WP_000976070.1;Parent=gene-AB25_RS05475;Dbxref=GenBank:WP_000976070.1;Name=WP_000976070.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1;locus_tag=AB25_RS05475;product=dUTP diphosphatase;protein_id=WP_000976070.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 39081 39677 . + . ID=gene-AB25_RS05470;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=AB25_RS05470;old_locus_tag=AB25_4191 NZ_JJMC01000065.1 Protein Homology CDS 39081 39677 . + 0 ID=cds-WP_000818601.1;Parent=gene-AB25_RS05470;Dbxref=GenBank:WP_000818601.1;Name=WP_000818601.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818604.1;locus_tag=AB25_RS05470;product=nucleoid occlusion factor SlmA;protein_id=WP_000818601.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 39723 40682 . - . ID=gene-AB25_RS05465;Name=AB25_RS05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS05465;old_locus_tag=AB25_4192 NZ_JJMC01000065.1 Protein Homology CDS 39723 40682 . - 0 ID=cds-WP_000340183.1;Parent=gene-AB25_RS05465;Dbxref=GenBank:WP_000340183.1;Name=WP_000340183.1;Ontology_term=GO:0006974,GO:0003723,GO:0003964,GO:0046872;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA-directed DNA polymerase activity|0003964||IEA,metal ion binding|0046872||IEA;go_process=DNA damage response|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000340179.1;locus_tag=AB25_RS05465;product=reverse transcriptase family protein;protein_id=WP_000340183.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 40980 41621 . - . ID=gene-AB25_RS05460;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=AB25_RS05460;old_locus_tag=AB25_4193 NZ_JJMC01000065.1 Protein Homology CDS 40980 41621 . - 0 ID=cds-WP_000806177.1;Parent=gene-AB25_RS05460;Dbxref=GenBank:WP_000806177.1;Name=WP_000806177.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418099.1;locus_tag=AB25_RS05460;product=orotate phosphoribosyltransferase;protein_id=WP_000806177.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 41687 42403 . - . ID=gene-AB25_RS05455;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=AB25_RS05455;old_locus_tag=AB25_4194 NZ_JJMC01000065.1 Protein Homology CDS 41687 42403 . - 0 ID=cds-WP_001247089.1;Parent=gene-AB25_RS05455;Dbxref=GenBank:WP_001247089.1;Name=WP_001247089.1;Ontology_term=GO:0008033,GO:0000049,GO:0009022;gbkey=CDS;gene=rph;go_function=tRNA binding|0000049||IEA,tRNA nucleotidyltransferase activity|0009022||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006803115.1;locus_tag=AB25_RS05455;product=ribonuclease PH;protein_id=WP_001247089.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 42530 43393 . + . ID=gene-AB25_RS05450;Name=yicC;gbkey=Gene;gene=yicC;gene_biotype=protein_coding;locus_tag=AB25_RS05450;old_locus_tag=AB25_4195 NZ_JJMC01000065.1 Protein Homology CDS 42530 43393 . + 0 ID=cds-WP_000621336.1;Parent=gene-AB25_RS05450;Dbxref=GenBank:WP_000621336.1;Name=WP_000621336.1;Ontology_term=GO:0016788;gbkey=CDS;gene=yicC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=AB25_RS05450;product=YicC/YloC family endoribonuclease;protein_id=WP_000621336.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 43614 44216 . + . ID=gene-AB25_RS05445;Name=dinD;gbkey=Gene;gene=dinD;gene_biotype=protein_coding;locus_tag=AB25_RS05445;old_locus_tag=AB25_4196 NZ_JJMC01000065.1 Protein Homology CDS 43614 44216 . + 0 ID=cds-WP_001356259.1;Parent=gene-AB25_RS05445;Dbxref=GenBank:WP_001356259.1;Name=WP_001356259.1;gbkey=CDS;gene=dinD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418102.2;locus_tag=AB25_RS05445;product=DNA damage-inducible protein D;protein_id=WP_001356259.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 44507 45124 . + . ID=gene-AB25_RS05440;Name=yicG;gbkey=Gene;gene=yicG;gene_biotype=protein_coding;locus_tag=AB25_RS05440;old_locus_tag=AB25_4197 NZ_JJMC01000065.1 Protein Homology CDS 44507 45124 . + 0 ID=cds-WP_000924289.1;Parent=gene-AB25_RS05440;Dbxref=GenBank:WP_000924289.1;Name=WP_000924289.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yicG;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312548.2;locus_tag=AB25_RS05440;product=trimeric intracellular cation channel family protein;protein_id=WP_000924289.1;transl_table=11 NZ_JJMC01000065.1 RefSeq pseudogene 45121 46748 . - . ID=gene-AB25_RS05435;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=pseudogene;locus_tag=AB25_RS05435;old_locus_tag=AB25_4198;pseudo=true NZ_JJMC01000065.1 Protein Homology CDS 45121 46748 . - 0 ID=cds-AB25_RS05435;Parent=gene-AB25_RS05435;Note=frameshifted;Ontology_term=GO:0006260,GO:0006281,GO:0003911;gbkey=CDS;gene=ligB;go_function=DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001391752.1;locus_tag=AB25_RS05435;product=NAD-dependent DNA ligase LigB;pseudo=true;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 46660 46917 . - . ID=gene-AB25_RS0126345;Name=AB25_RS0126345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0126345 NZ_JJMC01000065.1 GeneMarkS-2+ CDS 46660 46917 . - 0 ID=cds-WP_000638625.1;Parent=gene-AB25_RS0126345;Dbxref=GenBank:WP_000638625.1;Name=WP_000638625.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB25_RS0126345;product=hypothetical protein;protein_id=WP_000638625.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 47057 47680 . + . ID=gene-AB25_RS05430;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=AB25_RS05430;old_locus_tag=AB25_4200 NZ_JJMC01000065.1 Protein Homology CDS 47057 47680 . + 0 ID=cds-WP_001295237.1;Parent=gene-AB25_RS05430;Dbxref=GenBank:WP_001295237.1;Name=WP_001295237.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=AB25_RS05430;product=guanylate kinase;protein_id=WP_001295237.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 47735 48010 . + . ID=gene-AB25_RS05425;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=AB25_RS05425;old_locus_tag=AB25_4201 NZ_JJMC01000065.1 Protein Homology CDS 47735 48010 . + 0 ID=cds-WP_000135058.1;Parent=gene-AB25_RS05425;Dbxref=GenBank:WP_000135058.1;Name=WP_000135058.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=AB25_RS05425;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_000135058.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 48029 50137 . + . ID=gene-AB25_RS05420;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=AB25_RS05420;old_locus_tag=AB25_4202 NZ_JJMC01000065.1 Protein Homology CDS 48029 50137 . + 0 ID=cds-WP_000280488.1;Parent=gene-AB25_RS05420;Dbxref=GenBank:WP_000280488.1;Name=WP_000280488.1;Ontology_term=GO:0015969,GO:0008728,GO:0008893;gbkey=CDS;gene=spoT;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312552.1;locus_tag=AB25_RS05420;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_000280488.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 50144 50833 . + . ID=gene-AB25_RS05415;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=AB25_RS05415;old_locus_tag=AB25_4203 NZ_JJMC01000065.1 Protein Homology CDS 50144 50833 . + 0 ID=cds-WP_001070177.1;Parent=gene-AB25_RS05415;Dbxref=GenBank:WP_001070177.1;Name=WP_001070177.1;Ontology_term=GO:0030488,GO:0141100;gbkey=CDS;gene=trmH;go_function=tRNA (guanine(18)-2'-O)-methyltransferase activity|0141100||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418108.1;locus_tag=AB25_RS05415;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=WP_001070177.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 50839 52920 . + . ID=gene-AB25_RS05410;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=AB25_RS05410;old_locus_tag=AB25_4204 NZ_JJMC01000065.1 Protein Homology CDS 50839 52920 . + 0 ID=cds-WP_000678431.1;Parent=gene-AB25_RS05410;Dbxref=GenBank:WP_000678431.1;Name=WP_000678431.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709432.2;locus_tag=AB25_RS05410;product=ATP-dependent DNA helicase RecG;protein_id=WP_000678431.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 52905 53771 . - . ID=gene-AB25_RS31400;Name=AB25_RS31400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31400;old_locus_tag=AB25_4205 NZ_JJMC01000065.1 Protein Homology CDS 52905 53771 . - 0 ID=cds-WP_032171448.1;Parent=gene-AB25_RS31400;Dbxref=GenBank:WP_032171448.1;Name=WP_032171448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312555.2;locus_tag=AB25_RS31400;product=hypothetical protein;protein_id=WP_032171448.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 53774 54979 . - . ID=gene-AB25_RS05400;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=AB25_RS05400;old_locus_tag=AB25_4206 NZ_JJMC01000065.1 Protein Homology CDS 53774 54979 . - 0 ID=cds-WP_000468836.1;Parent=gene-AB25_RS05400;Dbxref=GenBank:WP_000468836.1;Name=WP_000468836.1;Ontology_term=GO:0015813,GO:0015501,GO:0016020;gbkey=CDS;gene=gltS;go_component=membrane|0016020||IEA;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312556.1;locus_tag=AB25_RS05400;product=sodium/glutamate symporter;protein_id=WP_000468836.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 55259 56650 . + . ID=gene-AB25_RS05395;Name=xanP;gbkey=Gene;gene=xanP;gene_biotype=protein_coding;locus_tag=AB25_RS05395;old_locus_tag=AB25_4207 NZ_JJMC01000065.1 Protein Homology CDS 55259 56650 . + 0 ID=cds-WP_001297380.1;Parent=gene-AB25_RS05395;Dbxref=GenBank:WP_001297380.1;Name=WP_001297380.1;gbkey=CDS;gene=xanP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312557.1;locus_tag=AB25_RS05395;product=xanthine/proton symporter XanP;protein_id=WP_001297380.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 56771 58480 . + . ID=gene-AB25_RS05390;Name=yicH;gbkey=Gene;gene=yicH;gene_biotype=protein_coding;locus_tag=AB25_RS05390;old_locus_tag=AB25_4208 NZ_JJMC01000065.1 Protein Homology CDS 56771 58480 . + 0 ID=cds-WP_001325853.1;Parent=gene-AB25_RS05390;Dbxref=GenBank:WP_001325853.1;Name=WP_001325853.1;gbkey=CDS;gene=yicH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312558.1;locus_tag=AB25_RS05390;product=AsmA family protein;protein_id=WP_001325853.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 58532 60850 . - . ID=gene-AB25_RS05385;Name=yicI;gbkey=Gene;gene=yicI;gene_biotype=protein_coding;locus_tag=AB25_RS05385;old_locus_tag=AB25_4209 NZ_JJMC01000065.1 Protein Homology CDS 58532 60850 . - 0 ID=cds-WP_000702973.1;Parent=gene-AB25_RS05385;Dbxref=GenBank:WP_000702973.1;Name=WP_000702973.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=yicI;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418113.1;locus_tag=AB25_RS05385;product=alpha-xylosidase;protein_id=WP_000702973.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 60860 62242 . - . ID=gene-AB25_RS05380;Name=yicJ;gbkey=Gene;gene=yicJ;gene_biotype=protein_coding;locus_tag=AB25_RS05380;old_locus_tag=AB25_4210 NZ_JJMC01000065.1 Protein Homology CDS 60860 62242 . - 0 ID=cds-WP_000834439.1;Parent=gene-AB25_RS05380;Dbxref=GenBank:WP_000834439.1;Name=WP_000834439.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0016020;gbkey=CDS;gene=yicJ;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418114.4;locus_tag=AB25_RS05380;product=glycoside-pentoside-hexuronide family transporter;protein_id=WP_000834439.1;transl_table=11 NZ_JJMC01000065.1 RefSeq gene 62535 62629 . + . ID=gene-AB25_RS05375;Name=AB25_RS05375;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS05375;old_locus_tag=AB25_4211 NZ_JJMC01000065.1 tRNAscan-SE tRNA 62535 62629 . + . ID=rna-AB25_RS05375;Parent=gene-AB25_RS05375;anticodon=(pos:62569..62571);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS05375;product=tRNA-Sec NZ_JJMC01000065.1 tRNAscan-SE exon 62535 62629 . + . ID=exon-AB25_RS05375-1;Parent=rna-AB25_RS05375;anticodon=(pos:62569..62571);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS05375;product=tRNA-Sec NZ_JJMC01000065.1 RefSeq gene 62929 64113 . + . ID=gene-AB25_RS05370;Name=AB25_RS05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS05370;old_locus_tag=AB25_4212 NZ_JJMC01000065.1 Protein Homology CDS 62929 64113 . + 0 ID=cds-WP_001218908.1;Parent=gene-AB25_RS05370;Dbxref=GenBank:WP_001218908.1;Name=WP_001218908.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001218899.1;locus_tag=AB25_RS05370;product=tyrosine-type recombinase/integrase;protein_id=WP_001218908.1;transl_table=11 NZ_JJMC01000065.1 RefSeq pseudogene 64232 64816 . - . ID=gene-AB25_RS05365;Name=AB25_RS05365;end_range=64816,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS05365;old_locus_tag=AB25_4213;partial=true;pseudo=true NZ_JJMC01000065.1 Protein Homology CDS 64232 64816 . - 1 ID=cds-AB25_RS05365;Parent=gene-AB25_RS05365;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=64816,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AB25_RS05365;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJMC01000066.1 1 111754 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000066.1 RefSeq region 1 111754 . + . ID=NZ_JJMC01000066.1:1..111754;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000066.1 RefSeq gene 1 109 . + . ID=gene-AB25_RS0126355;Name=AB25_RS0126355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0126355;partial=true;start_range=.,1 NZ_JJMC01000066.1 Protein Homology CDS 1 109 . + 1 ID=cds-WP_032296147.1;Parent=gene-AB25_RS0126355;Dbxref=GenBank:WP_032296147.1;Name=WP_032296147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309429.1;locus_tag=AB25_RS0126355;partial=true;product=antirestriction protein;protein_id=WP_032296147.1;start_range=.,1;transl_table=11 NZ_JJMC01000066.1 RefSeq pseudogene 125 538 . + . ID=gene-AB25_RS32530;Name=AB25_RS32530;end_range=538,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32530;partial=true;pseudo=true NZ_JJMC01000066.1 Protein Homology CDS 125 538 . + 0 ID=cds-AB25_RS32530;Parent=gene-AB25_RS32530;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006508,GO:0008237,GO:0046872;end_range=538,.;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310830.1;locus_tag=AB25_RS32530;partial=true;product=JAB domain-containing protein;pseudo=true;transl_table=11 NZ_JJMC01000066.1 RefSeq pseudogene 533 964 . + . ID=gene-AB25_RS32535;Name=AB25_RS32535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32535;partial=true;pseudo=true;start_range=.,533 NZ_JJMC01000066.1 Protein Homology CDS 533 964 . + 0 ID=cds-AB25_RS32535;Parent=gene-AB25_RS32535;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280511.1;locus_tag=AB25_RS32535;partial=true;product=DUF4942 domain-containing protein;pseudo=true;start_range=.,533;transl_table=11 NZ_JJMC01000066.1 RefSeq pseudogene 1199 1327 . + . ID=gene-AB25_RS05360;Name=rhuM;end_range=1327,.;gbkey=Gene;gene=rhuM;gene_biotype=pseudogene;locus_tag=AB25_RS05360;old_locus_tag=AB25_4216;partial=true;pseudo=true;start_range=.,1199 NZ_JJMC01000066.1 Protein Homology CDS 1199 1327 . + 0 ID=cds-AB25_RS05360;Parent=gene-AB25_RS05360;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1327,.;gbkey=CDS;gene=rhuM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462654.1;locus_tag=AB25_RS05360;partial=true;product=RhuM family protein;pseudo=true;start_range=.,1199;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 1757 2941 . + . ID=gene-AB25_RS05355;Name=setC;gbkey=Gene;gene=setC;gene_biotype=protein_coding;locus_tag=AB25_RS05355;old_locus_tag=AB25_4217 NZ_JJMC01000066.1 Protein Homology CDS 1757 2941 . + 0 ID=cds-WP_001172877.1;Parent=gene-AB25_RS05355;Dbxref=GenBank:WP_001172877.1;Name=WP_001172877.1;Ontology_term=GO:0008643,GO:0005351,GO:0016020;gbkey=CDS;gene=setC;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418115.1;locus_tag=AB25_RS05355;product=sugar efflux transporter;protein_id=WP_001172877.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 3052 3975 . + . ID=gene-AB25_RS05350;Name=yicL;gbkey=Gene;gene=yicL;gene_biotype=protein_coding;locus_tag=AB25_RS05350;old_locus_tag=AB25_4218 NZ_JJMC01000066.1 Protein Homology CDS 3052 3975 . + 0 ID=cds-WP_000535960.1;Parent=gene-AB25_RS05350;Dbxref=GenBank:WP_000535960.1;Name=WP_000535960.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yicL;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418116.1;locus_tag=AB25_RS05350;product=carboxylate/amino acid/amine transporter;protein_id=WP_000535960.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 3979 4797 . - . ID=gene-AB25_RS05345;Name=nlpA;gbkey=Gene;gene=nlpA;gene_biotype=protein_coding;locus_tag=AB25_RS05345;old_locus_tag=AB25_4219 NZ_JJMC01000066.1 Protein Homology CDS 3979 4797 . - 0 ID=cds-WP_000779432.1;Parent=gene-AB25_RS05345;Dbxref=GenBank:WP_000779432.1;Name=WP_000779432.1;gbkey=CDS;gene=nlpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418117.1;locus_tag=AB25_RS05345;product=lipoprotein NlpA;protein_id=WP_000779432.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 5019 5312 . + . ID=gene-AB25_RS05340;Name=yicS;gbkey=Gene;gene=yicS;gene_biotype=protein_coding;locus_tag=AB25_RS05340;old_locus_tag=AB25_4220 NZ_JJMC01000066.1 Protein Homology CDS 5019 5312 . + 0 ID=cds-WP_000805509.1;Parent=gene-AB25_RS05340;Dbxref=GenBank:WP_000805509.1;Name=WP_000805509.1;gbkey=CDS;gene=yicS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588471.1;locus_tag=AB25_RS05340;product=protein YicS;protein_id=WP_000805509.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 5353 6543 . - . ID=gene-AB25_RS05335;Name=nepI;gbkey=Gene;gene=nepI;gene_biotype=protein_coding;locus_tag=AB25_RS05335;old_locus_tag=AB25_4221 NZ_JJMC01000066.1 Protein Homology CDS 5353 6543 . - 0 ID=cds-WP_001288553.1;Parent=gene-AB25_RS05335;Dbxref=GenBank:WP_001288553.1;Name=WP_001288553.1;Ontology_term=GO:0015860,GO:0015211,GO:0016020;gbkey=CDS;gene=nepI;go_component=membrane|0016020||IEA;go_function=purine nucleoside transmembrane transporter activity|0015211||IEA;go_process=purine nucleoside transmembrane transport|0015860||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418118.2;locus_tag=AB25_RS05335;product=purine ribonucleoside efflux pump NepI;protein_id=WP_001288553.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 6754 7206 . - . ID=gene-AB25_RS05330;Name=yicN;gbkey=Gene;gene=yicN;gene_biotype=protein_coding;locus_tag=AB25_RS05330;old_locus_tag=AB25_4222 NZ_JJMC01000066.1 Protein Homology CDS 6754 7206 . - 0 ID=cds-WP_001300927.1;Parent=gene-AB25_RS05330;Dbxref=GenBank:WP_001300927.1;Name=WP_001300927.1;gbkey=CDS;gene=yicN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418119.2;locus_tag=AB25_RS05330;product=DUF1198 domain-containing protein;protein_id=WP_001300927.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 7259 8593 . - . ID=gene-AB25_RS05325;Name=adeQ;gbkey=Gene;gene=adeQ;gene_biotype=protein_coding;gene_synonym=yicO;locus_tag=AB25_RS05325;old_locus_tag=AB25_4223 NZ_JJMC01000066.1 Protein Homology CDS 7259 8593 . - 0 ID=cds-WP_001058151.1;Parent=gene-AB25_RS05325;Dbxref=GenBank:WP_001058151.1;Name=WP_001058151.1;gbkey=CDS;gene=adeQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418120.2;locus_tag=AB25_RS05325;product=adenine permease AdeQ;protein_id=WP_001058151.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 8768 10534 . + . ID=gene-AB25_RS05320;Name=adeD;gbkey=Gene;gene=adeD;gene_biotype=protein_coding;locus_tag=AB25_RS05320;old_locus_tag=AB25_4224 NZ_JJMC01000066.1 Protein Homology CDS 8768 10534 . + 0 ID=cds-WP_001065695.1;Parent=gene-AB25_RS05320;Dbxref=GenBank:WP_001065695.1;Name=WP_001065695.1;gbkey=CDS;gene=adeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418121.1;locus_tag=AB25_RS05320;product=adenine deaminase;protein_id=WP_001065695.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 10579 11970 . - . ID=gene-AB25_RS05315;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=AB25_RS05315;old_locus_tag=AB25_4225 NZ_JJMC01000066.1 Protein Homology CDS 10579 11970 . - 0 ID=cds-WP_000879194.1;Parent=gene-AB25_RS05315;Dbxref=GenBank:WP_000879194.1;Name=WP_000879194.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312630.1;locus_tag=AB25_RS05315;product=hexose-6-phosphate:phosphate antiporter;protein_id=WP_000879194.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 12108 13427 . - . ID=gene-AB25_RS05310;Name=uhpC;gbkey=Gene;gene=uhpC;gene_biotype=protein_coding;locus_tag=AB25_RS05310;old_locus_tag=AB25_4226 NZ_JJMC01000066.1 Protein Homology CDS 12108 13427 . - 0 ID=cds-WP_000936566.1;Parent=gene-AB25_RS05310;Dbxref=GenBank:WP_000936566.1;Name=WP_000936566.1;gbkey=CDS;gene=uhpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418123.2;locus_tag=AB25_RS05310;product=MFS transporter family glucose-6-phosphate receptor UhpC;protein_id=WP_000936566.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 13437 14939 . - . ID=gene-AB25_RS05305;Name=uhpB;gbkey=Gene;gene=uhpB;gene_biotype=protein_coding;locus_tag=AB25_RS05305;old_locus_tag=AB25_4227 NZ_JJMC01000066.1 Protein Homology CDS 13437 14939 . - 0 ID=cds-WP_001295243.1;Parent=gene-AB25_RS05305;Dbxref=GenBank:WP_001295243.1;Name=WP_001295243.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=uhpB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418124.4;locus_tag=AB25_RS05305;product=signal transduction histidine-protein kinase/phosphatase UhpB;protein_id=WP_001295243.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 14939 15529 . - . ID=gene-AB25_RS05300;Name=uhpA;gbkey=Gene;gene=uhpA;gene_biotype=protein_coding;locus_tag=AB25_RS05300;old_locus_tag=AB25_4228 NZ_JJMC01000066.1 Protein Homology CDS 14939 15529 . - 0 ID=cds-WP_000633668.1;Parent=gene-AB25_RS05300;Dbxref=GenBank:WP_000633668.1;Name=WP_000633668.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=uhpA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312633.1;locus_tag=AB25_RS05300;product=transcriptional regulator UhpA;protein_id=WP_000633668.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 15604 15894 . - . ID=gene-AB25_RS05295;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=AB25_RS05295;old_locus_tag=AB25_4229 NZ_JJMC01000066.1 Protein Homology CDS 15604 15894 . - 0 ID=cds-WP_001181706.1;Parent=gene-AB25_RS05295;Dbxref=GenBank:WP_001181706.1;Name=WP_001181706.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312638.1;locus_tag=AB25_RS05295;product=acetolactate synthase small subunit;protein_id=WP_001181706.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 15898 17586 . - . ID=gene-AB25_RS05290;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=AB25_RS05290;old_locus_tag=AB25_4230 NZ_JJMC01000066.1 Protein Homology CDS 15898 17586 . - 0 ID=cds-WP_000168480.1;Parent=gene-AB25_RS05290;Dbxref=GenBank:WP_000168480.1;Name=WP_000168480.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418127.1;locus_tag=AB25_RS05290;product=acetolactate synthase large subunit;protein_id=WP_000168480.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 17692 17790 . - . ID=gene-AB25_RS27405;Name=ivbL;gbkey=Gene;gene=ivbL;gene_biotype=protein_coding;locus_tag=AB25_RS27405 NZ_JJMC01000066.1 Protein Homology CDS 17692 17790 . - 0 ID=cds-WP_001315912.1;Parent=gene-AB25_RS27405;Dbxref=GenBank:WP_001315912.1;Name=WP_001315912.1;gbkey=CDS;gene=ivbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418128.1;locus_tag=AB25_RS27405;product=ilvB operon leader peptide IvbL;protein_id=WP_001315912.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 18355 18444 . + . ID=gene-AB25_RS0126385;Name=tisB;gbkey=Gene;gene=tisB;gene_biotype=protein_coding;locus_tag=AB25_RS0126385 NZ_JJMC01000066.1 Protein Homology CDS 18355 18444 . + 0 ID=cds-WP_000060506.1;Parent=gene-AB25_RS0126385;Dbxref=GenBank:WP_000060506.1;Name=WP_000060506.1;gbkey=CDS;gene=tisB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502662.1;locus_tag=AB25_RS0126385;product=type I toxin-antitoxin system toxin TisB;protein_id=WP_000060506.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 18707 18781 . - . ID=gene-AB25_RS32320;Name=ysdE;gbkey=Gene;gene=ysdE;gene_biotype=protein_coding;locus_tag=AB25_RS32320 NZ_JJMC01000066.1 Protein Homology CDS 18707 18781 . - 0 ID=cds-WP_211180519.1;Parent=gene-AB25_RS32320;Dbxref=GenBank:WP_211180519.1;Name=WP_211180519.1;gbkey=CDS;gene=ysdE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051212.1;locus_tag=AB25_RS32320;product=protein YsdE;protein_id=WP_211180519.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 18863 20047 . + . ID=gene-AB25_RS05280;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=AB25_RS05280;old_locus_tag=AB25_4233 NZ_JJMC01000066.1 Protein Homology CDS 18863 20047 . + 0 ID=cds-WP_000828746.1;Parent=gene-AB25_RS05280;Dbxref=GenBank:WP_000828746.1;Name=WP_000828746.1;gbkey=CDS;gene=emrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418129.2;locus_tag=AB25_RS05280;product=multidrug efflux MFS transporter EmrD;protein_id=WP_000828746.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 20055 20552 . - . ID=gene-AB25_RS05275;Name=yidF;gbkey=Gene;gene=yidF;gene_biotype=protein_coding;locus_tag=AB25_RS05275;old_locus_tag=AB25_4234 NZ_JJMC01000066.1 Protein Homology CDS 20055 20552 . - 0 ID=cds-WP_000148063.1;Parent=gene-AB25_RS05275;Dbxref=GenBank:WP_000148063.1;Name=WP_000148063.1;gbkey=CDS;gene=yidF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709521.1;locus_tag=AB25_RS05275;product=radical SAM protein;protein_id=WP_000148063.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 20549 20911 . - . ID=gene-AB25_RS05270;Name=yidG;gbkey=Gene;gene=yidG;gene_biotype=protein_coding;locus_tag=AB25_RS05270;old_locus_tag=AB25_4235 NZ_JJMC01000066.1 Protein Homology CDS 20549 20911 . - 0 ID=cds-WP_001113432.1;Parent=gene-AB25_RS05270;Dbxref=GenBank:WP_001113432.1;Name=WP_001113432.1;gbkey=CDS;gene=yidG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312643.1;locus_tag=AB25_RS05270;product=DUF202 domain-containing protein;protein_id=WP_001113432.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 20901 21248 . - . ID=gene-AB25_RS05265;Name=yidH;gbkey=Gene;gene=yidH;gene_biotype=protein_coding;locus_tag=AB25_RS05265;old_locus_tag=AB25_4236 NZ_JJMC01000066.1 Protein Homology CDS 20901 21248 . - 0 ID=cds-WP_000703959.1;Parent=gene-AB25_RS05265;Dbxref=GenBank:WP_000703959.1;Name=WP_000703959.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yidH;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312644.1;locus_tag=AB25_RS05265;product=YidH family protein;protein_id=WP_000703959.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 21358 21807 . + . ID=gene-AB25_RS05260;Name=yidI;gbkey=Gene;gene=yidI;gene_biotype=protein_coding;locus_tag=AB25_RS05260;old_locus_tag=AB25_4237 NZ_JJMC01000066.1 Protein Homology CDS 21358 21807 . + 0 ID=cds-WP_000511287.1;Parent=gene-AB25_RS05260;Dbxref=GenBank:WP_000511287.1;Name=WP_000511287.1;gbkey=CDS;gene=yidI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418133.1;locus_tag=AB25_RS05260;product=protein YidI;protein_id=WP_000511287.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 21854 23347 . - . ID=gene-AB25_RS05255;Name=yidJ;gbkey=Gene;gene=yidJ;gene_biotype=protein_coding;locus_tag=AB25_RS05255;old_locus_tag=AB25_4238 NZ_JJMC01000066.1 Protein Homology CDS 21854 23347 . - 0 ID=cds-WP_000828483.1;Parent=gene-AB25_RS05255;Dbxref=GenBank:WP_000828483.1;Name=WP_000828483.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yidJ;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418134.1;locus_tag=AB25_RS05255;product=sulfatase-like hydrolase/transferase;protein_id=WP_000828483.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 23344 25059 . - . ID=gene-AB25_RS05250;Name=yidK;gbkey=Gene;gene=yidK;gene_biotype=protein_coding;locus_tag=AB25_RS05250;old_locus_tag=AB25_4239 NZ_JJMC01000066.1 Protein Homology CDS 23344 25059 . - 0 ID=cds-WP_001087147.1;Parent=gene-AB25_RS05250;Dbxref=GenBank:WP_001087147.1;Name=WP_001087147.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yidK;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418135.1;locus_tag=AB25_RS05250;product=solute:sodium symporter family transporter;protein_id=WP_001087147.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 25226 26119 . + . ID=gene-AB25_RS05245;Name=yidL;gbkey=Gene;gene=yidL;gene_biotype=protein_coding;locus_tag=AB25_RS05245;old_locus_tag=AB25_4240 NZ_JJMC01000066.1 Protein Homology CDS 25226 26119 . + 0 ID=cds-WP_001013540.1;Parent=gene-AB25_RS05245;Dbxref=GenBank:WP_001013540.1;Name=WP_001013540.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=yidL;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418136.2;locus_tag=AB25_RS05245;product=helix-turn-helix transcriptional regulator;protein_id=WP_001013540.1;transl_table=11 NZ_JJMC01000066.1 RefSeq pseudogene 26116 26930 . - . ID=gene-AB25_RS05240;Name=AB25_RS05240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS05240;old_locus_tag=AB25_4241;pseudo=true NZ_JJMC01000066.1 Protein Homology CDS 26116 26930 . - 0 ID=cds-AB25_RS05240;Parent=gene-AB25_RS05240;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016538685.1;locus_tag=AB25_RS05240;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 26930 28546 . - . ID=gene-AB25_RS05235;Name=AB25_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS05235;old_locus_tag=AB25_4242 NZ_JJMC01000066.1 Protein Homology CDS 26930 28546 . - 0 ID=cds-WP_032171469.1;Parent=gene-AB25_RS05235;Dbxref=GenBank:WP_032171469.1;Name=WP_032171469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312650.2;locus_tag=AB25_RS05235;product=PTS sugar transporter subunit IIB;protein_id=WP_032171469.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 28842 29558 . + . ID=gene-AB25_RS05230;Name=yidP;gbkey=Gene;gene=yidP;gene_biotype=protein_coding;locus_tag=AB25_RS05230;old_locus_tag=AB25_4243 NZ_JJMC01000066.1 Protein Homology CDS 28842 29558 . + 0 ID=cds-WP_001300779.1;Parent=gene-AB25_RS05230;Dbxref=GenBank:WP_001300779.1;Name=WP_001300779.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=yidP;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418139.1;locus_tag=AB25_RS05230;product=GntR family transcriptional regulator;protein_id=WP_001300779.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 29555 31216 . - . ID=gene-AB25_RS05225;Name=yidE;gbkey=Gene;gene=yidE;gene_biotype=protein_coding;locus_tag=AB25_RS05225;old_locus_tag=AB25_4244 NZ_JJMC01000066.1 Protein Homology CDS 29555 31216 . - 0 ID=cds-WP_001279746.1;Parent=gene-AB25_RS05225;Dbxref=GenBank:WP_001279746.1;Name=WP_001279746.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;gene=yidE;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312652.2;locus_tag=AB25_RS05225;product=putative transporter;protein_id=WP_001279746.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 31413 31841 . - . ID=gene-AB25_RS05220;Name=ibpB;gbkey=Gene;gene=ibpB;gene_biotype=protein_coding;locus_tag=AB25_RS05220;old_locus_tag=AB25_4246 NZ_JJMC01000066.1 Protein Homology CDS 31413 31841 . - 0 ID=cds-WP_001243431.1;Parent=gene-AB25_RS05220;Dbxref=GenBank:WP_001243431.1;Name=WP_001243431.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpB;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709512.2;locus_tag=AB25_RS05220;product=small heat shock chaperone IbpB;protein_id=WP_001243431.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 31953 32366 . - . ID=gene-AB25_RS05215;Name=ibpA;gbkey=Gene;gene=ibpA;gene_biotype=protein_coding;locus_tag=AB25_RS05215;old_locus_tag=AB25_4247 NZ_JJMC01000066.1 Protein Homology CDS 31953 32366 . - 0 ID=cds-WP_001243437.1;Parent=gene-AB25_RS05215;Dbxref=GenBank:WP_001243437.1;Name=WP_001243437.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpA;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687722.1;locus_tag=AB25_RS05215;product=small heat shock chaperone IbpA;protein_id=WP_001243437.1;transl_table=11 NZ_JJMC01000066.1 cmsearch sequence_feature 32360 32432 . - . ID=id-NZ_JJMC01000066.1:32360..32432;Dbxref=RFAM:RF01832;Note=ROSE (Repression Of Heat Shock gene Expression) occurs in the 5'-region of heat shock genes and acts as an RNA thermometer to modulate expression.;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JJMC01000066.1 RefSeq gene 32672 33004 . + . ID=gene-AB25_RS05210;Name=yidQ;gbkey=Gene;gene=yidQ;gene_biotype=protein_coding;locus_tag=AB25_RS05210;old_locus_tag=AB25_4249 NZ_JJMC01000066.1 Protein Homology CDS 32672 33004 . + 0 ID=cds-WP_000620888.1;Parent=gene-AB25_RS05210;Dbxref=GenBank:WP_000620888.1;Name=WP_000620888.1;gbkey=CDS;gene=yidQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418143.2;locus_tag=AB25_RS05210;product=YceK/YidQ family lipoprotein;protein_id=WP_000620888.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 33006 34220 . - . ID=gene-AB25_RS05205;Name=yidR;gbkey=Gene;gene=yidR;gene_biotype=protein_coding;locus_tag=AB25_RS05205;old_locus_tag=AB25_4250 NZ_JJMC01000066.1 Protein Homology CDS 33006 34220 . - 0 ID=cds-WP_001295245.1;Parent=gene-AB25_RS05205;Dbxref=GenBank:WP_001295245.1;Name=WP_001295245.1;gbkey=CDS;gene=yidR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312656.3;locus_tag=AB25_RS05205;product=DUF3748 domain-containing protein;protein_id=WP_001295245.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 34321 35385 . + . ID=gene-AB25_RS05200;Name=cbrA;gbkey=Gene;gene=cbrA;gene_biotype=protein_coding;locus_tag=AB25_RS05200;old_locus_tag=AB25_4251 NZ_JJMC01000066.1 Protein Homology CDS 34321 35385 . + 0 ID=cds-WP_001446319.1;Parent=gene-AB25_RS05200;Dbxref=GenBank:WP_001446319.1;Name=WP_001446319.1;gbkey=CDS;gene=cbrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418145.2;locus_tag=AB25_RS05200;product=colicin M resistance lipid reductase CbrA;protein_id=WP_001446319.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 35382 36719 . - . ID=gene-AB25_RS05195;Name=dgoT;gbkey=Gene;gene=dgoT;gene_biotype=protein_coding;locus_tag=AB25_RS05195;old_locus_tag=AB25_4252 NZ_JJMC01000066.1 Protein Homology CDS 35382 36719 . - 0 ID=cds-WP_000253455.1;Parent=gene-AB25_RS05195;Dbxref=GenBank:WP_000253455.1;Name=WP_000253455.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=dgoT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709507.1;locus_tag=AB25_RS05195;product=MFS transporter;protein_id=WP_000253455.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 36794 37942 . - . ID=gene-AB25_RS05190;Name=dgoD;gbkey=Gene;gene=dgoD;gene_biotype=protein_coding;locus_tag=AB25_RS05190;old_locus_tag=AB25_4253 NZ_JJMC01000066.1 Protein Homology CDS 36794 37942 . - 0 ID=cds-WP_000705001.1;Parent=gene-AB25_RS05190;Dbxref=GenBank:WP_000705001.1;Name=WP_000705001.1;Ontology_term=GO:0009063,GO:0008869;gbkey=CDS;gene=dgoD;go_function=galactonate dehydratase activity|0008869||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020077623.1;locus_tag=AB25_RS05190;product=galactonate dehydratase;protein_id=WP_000705001.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 37939 38556 . - . ID=gene-AB25_RS05185;Name=dgoA;gbkey=Gene;gene=dgoA;gene_biotype=protein_coding;locus_tag=AB25_RS05185;old_locus_tag=AB25_4254 NZ_JJMC01000066.1 Protein Homology CDS 37939 38556 . - 0 ID=cds-WP_001198699.1;Parent=gene-AB25_RS05185;Dbxref=GenBank:WP_001198699.1;Name=WP_001198699.1;gbkey=CDS;gene=dgoA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026238.1;locus_tag=AB25_RS05185;product=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;protein_id=WP_001198699.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 38540 39418 . - . ID=gene-AB25_RS05180;Name=dgoK;gbkey=Gene;gene=dgoK;gene_biotype=protein_coding;locus_tag=AB25_RS05180;old_locus_tag=AB25_4255 NZ_JJMC01000066.1 Protein Homology CDS 38540 39418 . - 0 ID=cds-WP_000127105.1;Parent=gene-AB25_RS05180;Dbxref=GenBank:WP_000127105.1;Name=WP_000127105.1;gbkey=CDS;gene=dgoK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709506.1;locus_tag=AB25_RS05180;product=2-dehydro-3-deoxygalactonokinase;protein_id=WP_000127105.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 39415 40104 . - . ID=gene-AB25_RS05175;Name=dgoR;gbkey=Gene;gene=dgoR;gene_biotype=protein_coding;locus_tag=AB25_RS05175;old_locus_tag=AB25_4256 NZ_JJMC01000066.1 Protein Homology CDS 39415 40104 . - 0 ID=cds-WP_000174305.1;Parent=gene-AB25_RS05175;Dbxref=GenBank:WP_000174305.1;Name=WP_000174305.1;gbkey=CDS;gene=dgoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709505.1;locus_tag=AB25_RS05175;product=D-galactonate utilization transcriptional regulator DgoR;protein_id=WP_000174305.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 40382 41038 . + . ID=gene-AB25_RS05170;Name=yidX;gbkey=Gene;gene=yidX;gene_biotype=protein_coding;locus_tag=AB25_RS05170;old_locus_tag=AB25_4257 NZ_JJMC01000066.1 Protein Homology CDS 40382 41038 . + 0 ID=cds-WP_000772934.1;Parent=gene-AB25_RS05170;Dbxref=GenBank:WP_000772934.1;Name=WP_000772934.1;gbkey=CDS;gene=yidX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709504.1;locus_tag=AB25_RS05170;product=protein YidX;protein_id=WP_000772934.1;transl_table=11 NZ_JJMC01000066.1 RefSeq pseudogene 41084 41896 . - . ID=gene-AB25_RS0126390;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=pseudogene;locus_tag=AB25_RS0126390;old_locus_tag=AB25_4258;pseudo=true NZ_JJMC01000066.1 Protein Homology CDS 41084 41896 . - 0 ID=cds-AB25_RS0126390;Parent=gene-AB25_RS0126390;Note=internal stop;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418152.1;locus_tag=AB25_RS0126390;product=sugar-phosphatase;pseudo=true;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 42011 42409 . - . ID=gene-AB25_RS05165;Name=yidB;gbkey=Gene;gene=yidB;gene_biotype=protein_coding;locus_tag=AB25_RS05165;old_locus_tag=AB25_4260 NZ_JJMC01000066.1 Protein Homology CDS 42011 42409 . - 0 ID=cds-WP_000522208.1;Parent=gene-AB25_RS05165;Dbxref=GenBank:WP_000522208.1;Name=WP_000522208.1;gbkey=CDS;gene=yidB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418153.4;locus_tag=AB25_RS05165;product=YidB family protein;protein_id=WP_000522208.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 42649 45063 . - . ID=gene-AB25_RS05160;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=AB25_RS05160;old_locus_tag=AB25_4261 NZ_JJMC01000066.1 Protein Homology CDS 42649 45063 . - 0 ID=cds-WP_001508092.1;Parent=gene-AB25_RS05160;Dbxref=GenBank:WP_001508092.1;Name=WP_001508092.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1;locus_tag=AB25_RS05160;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_001508092.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 45092 46165 . - . ID=gene-AB25_RS05155;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=AB25_RS05155;old_locus_tag=AB25_4262 NZ_JJMC01000066.1 Protein Homology CDS 45092 46165 . - 0 ID=cds-WP_000060112.1;Parent=gene-AB25_RS05155;Dbxref=GenBank:WP_000060112.1;Name=WP_000060112.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121479.1;locus_tag=AB25_RS05155;product=DNA replication/repair protein RecF;protein_id=WP_000060112.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 46165 47265 . - . ID=gene-AB25_RS05150;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=AB25_RS05150;old_locus_tag=AB25_4263 NZ_JJMC01000066.1 Protein Homology CDS 46165 47265 . - 0 ID=cds-WP_000673464.1;Parent=gene-AB25_RS05150;Dbxref=GenBank:WP_000673464.1;Name=WP_000673464.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=AB25_RS05150;product=DNA polymerase III subunit beta;protein_id=WP_000673464.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 47270 48673 . - . ID=gene-AB25_RS05145;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=AB25_RS05145;old_locus_tag=AB25_4264 NZ_JJMC01000066.1 Protein Homology CDS 47270 48673 . - 0 ID=cds-WP_000059111.1;Parent=gene-AB25_RS05145;Dbxref=GenBank:WP_000059111.1;Name=WP_000059111.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418157.1;locus_tag=AB25_RS05145;product=chromosomal replication initiator protein DnaA;protein_id=WP_000059111.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 48970 49050 . + . ID=gene-AB25_RS31810;Name=AB25_RS31810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31810 NZ_JJMC01000066.1 Protein Homology CDS 48970 49050 . + 0 ID=cds-WP_120795392.1;Parent=gene-AB25_RS31810;Dbxref=GenBank:WP_120795392.1;Name=WP_120795392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518826.1;locus_tag=AB25_RS31810;product=protein YsdD;protein_id=WP_120795392.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 49280 49420 . + . ID=gene-AB25_RS05140;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=AB25_RS05140;old_locus_tag=AB25_4265 NZ_JJMC01000066.1 Protein Homology CDS 49280 49420 . + 0 ID=cds-WP_000831330.1;Parent=gene-AB25_RS05140;Dbxref=GenBank:WP_000831330.1;Name=WP_000831330.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1;locus_tag=AB25_RS05140;product=50S ribosomal protein L34;protein_id=WP_000831330.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 49437 49796 . + . ID=gene-AB25_RS05135;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=AB25_RS05135;old_locus_tag=AB25_4266 NZ_JJMC01000066.1 Protein Homology CDS 49437 49796 . + 0 ID=cds-WP_000239730.1;Parent=gene-AB25_RS05135;Dbxref=GenBank:WP_000239730.1;Name=WP_000239730.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172301.1;locus_tag=AB25_RS05135;product=ribonuclease P protein component;protein_id=WP_000239730.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 49760 50017 . + . ID=gene-AB25_RS0126400;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=AB25_RS0126400 NZ_JJMC01000066.1 Protein Homology CDS 49760 50017 . + 0 ID=cds-WP_001307474.1;Parent=gene-AB25_RS0126400;Dbxref=GenBank:WP_001307474.1;Name=WP_001307474.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462741.1;locus_tag=AB25_RS0126400;product=membrane protein insertion efficiency factor YidD;protein_id=WP_001307474.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 50020 51666 . + . ID=gene-AB25_RS05130;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=AB25_RS05130;old_locus_tag=AB25_4267 NZ_JJMC01000066.1 Protein Homology CDS 50020 51666 . + 0 ID=cds-WP_000378258.1;Parent=gene-AB25_RS05130;Dbxref=GenBank:WP_000378258.1;Name=WP_000378258.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312667.1;locus_tag=AB25_RS05130;product=membrane protein insertase YidC;protein_id=WP_000378258.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 51772 53136 . + . ID=gene-AB25_RS05125;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=AB25_RS05125;old_locus_tag=AB25_4268 NZ_JJMC01000066.1 Protein Homology CDS 51772 53136 . + 0 ID=cds-WP_032171474.1;Parent=gene-AB25_RS05125;Dbxref=GenBank:WP_032171474.1;Name=WP_032171474.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418162.1;locus_tag=AB25_RS05125;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_032171474.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 53379 53453 . + . ID=gene-AB25_RS0126405;Name=tnaC;gbkey=Gene;gene=tnaC;gene_biotype=protein_coding;locus_tag=AB25_RS0126405 NZ_JJMC01000066.1 Protein Homology CDS 53379 53453 . + 0 ID=cds-WP_001364348.1;Parent=gene-AB25_RS0126405;Dbxref=GenBank:WP_001364348.1;Name=WP_001364348.1;Ontology_term=GO:0006569,GO:0031554,GO:0031556;gbkey=CDS;gene=tnaC;go_process=L-tryptophan catabolic process|0006569||IEA,regulation of termination of DNA-templated transcription|0031554||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312671.1;locus_tag=AB25_RS0126405;product=tryptophanase leader peptide;protein_id=WP_001364348.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 53674 55089 . + . ID=gene-AB25_RS05120;Name=tnaA;gbkey=Gene;gene=tnaA;gene_biotype=protein_coding;locus_tag=AB25_RS05120;old_locus_tag=AB25_4269 NZ_JJMC01000066.1 Protein Homology CDS 53674 55089 . + 0 ID=cds-WP_001295247.1;Parent=gene-AB25_RS05120;Dbxref=GenBank:WP_001295247.1;Name=WP_001295247.1;Ontology_term=GO:0006568,GO:0009034;gbkey=CDS;gene=tnaA;go_function=tryptophanase activity|0009034||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709490.2;locus_tag=AB25_RS05120;product=tryptophanase;protein_id=WP_001295247.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 55180 56427 . + . ID=gene-AB25_RS05115;Name=tnaB;gbkey=Gene;gene=tnaB;gene_biotype=protein_coding;locus_tag=AB25_RS05115;old_locus_tag=AB25_4270 NZ_JJMC01000066.1 Protein Homology CDS 55180 56427 . + 0 ID=cds-WP_032171476.1;Parent=gene-AB25_RS05115;Dbxref=GenBank:WP_032171476.1;Name=WP_032171476.1;gbkey=CDS;gene=tnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312673.1;locus_tag=AB25_RS05115;product=low affinity tryptophan permease TnaB;protein_id=WP_032171476.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 56560 57735 . + . ID=gene-AB25_RS05110;Name=mdtL;gbkey=Gene;gene=mdtL;gene_biotype=protein_coding;locus_tag=AB25_RS05110;old_locus_tag=AB25_4271 NZ_JJMC01000066.1 Protein Homology CDS 56560 57735 . + 0 ID=cds-WP_000085982.1;Parent=gene-AB25_RS05110;Dbxref=GenBank:WP_000085982.1;Name=WP_000085982.1;gbkey=CDS;gene=mdtL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418166.1;locus_tag=AB25_RS05110;product=multidrug efflux MFS transporter MdtL;protein_id=WP_000085982.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 57710 58669 . + . ID=gene-AB25_RS05105;Name=yidZ;gbkey=Gene;gene=yidZ;gene_biotype=protein_coding;locus_tag=AB25_RS05105;old_locus_tag=AB25_4272 NZ_JJMC01000066.1 Protein Homology CDS 57710 58669 . + 0 ID=cds-WP_001323700.1;Parent=gene-AB25_RS05105;Dbxref=GenBank:WP_001323700.1;Name=WP_001323700.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yidZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312675.1;locus_tag=AB25_RS05105;product=HTH-type transcriptional regulator YidZ;protein_id=WP_001323700.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 58826 59575 . + . ID=gene-AB25_RS05100;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=AB25_RS05100;old_locus_tag=AB25_4273 NZ_JJMC01000066.1 Protein Homology CDS 58826 59575 . + 0 ID=cds-WP_001315916.1;Parent=gene-AB25_RS05100;Dbxref=GenBank:WP_001315916.1;Name=WP_001315916.1;Ontology_term=GO:0008897;gbkey=CDS;gene=yieE;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418168.2;locus_tag=AB25_RS05100;product=4'-phosphopantetheinyl transferase family protein;protein_id=WP_001315916.1;transl_table=11 NZ_JJMC01000066.1 RefSeq pseudogene 59597 60160 . + . ID=gene-AB25_RS05095;Name=yieF;end_range=60160,.;gbkey=Gene;gene=yieF;gene_biotype=pseudogene;locus_tag=AB25_RS05095;old_locus_tag=AB25_4274;partial=true;pseudo=true NZ_JJMC01000066.1 Protein Homology CDS 59597 60160 . + 0 ID=cds-AB25_RS05095;Parent=gene-AB25_RS05095;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0008752,GO:0008753,GO:0010181,GO:0016491,GO:0050136,GO:0052873;end_range=60160,.;gbkey=CDS;gene=yieF;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA,NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,FMN reductase (NADPH) activity|0052873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312677.1;locus_tag=AB25_RS05095;partial=true;product=NADPH-dependent FMN reductase;pseudo=true;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 60217 61554 . - . ID=gene-AB25_RS05090;Name=adeP;gbkey=Gene;gene=adeP;gene_biotype=protein_coding;locus_tag=AB25_RS05090;old_locus_tag=AB25_4275 NZ_JJMC01000066.1 Protein Homology CDS 60217 61554 . - 0 ID=cds-WP_001299598.1;Parent=gene-AB25_RS05090;Dbxref=GenBank:WP_001299598.1;Name=WP_001299598.1;gbkey=CDS;gene=adeP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312678.1;locus_tag=AB25_RS05090;product=adenine permease AdeP;protein_id=WP_001299598.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 61721 62386 . + . ID=gene-AB25_RS05085;Name=yieH;gbkey=Gene;gene=yieH;gene_biotype=protein_coding;locus_tag=AB25_RS05085;old_locus_tag=AB25_4276 NZ_JJMC01000066.1 Protein Homology CDS 61721 62386 . + 0 ID=cds-WP_000078043.1;Parent=gene-AB25_RS05085;Dbxref=GenBank:WP_000078043.1;Name=WP_000078043.1;gbkey=CDS;gene=yieH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418171.1;locus_tag=AB25_RS05085;product=6-phosphogluconate phosphatase;protein_id=WP_000078043.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 62453 62926 . + . ID=gene-AB25_RS0126410;Name=AB25_RS0126410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0126410;old_locus_tag=AB25_4277 NZ_JJMC01000066.1 Protein Homology CDS 62453 62926 . + 0 ID=cds-WP_000116764.1;Parent=gene-AB25_RS0126410;Dbxref=GenBank:WP_000116764.1;Name=WP_000116764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709481.1;locus_tag=AB25_RS0126410;product=hypothetical protein;protein_id=WP_000116764.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 62975 63562 . + . ID=gene-AB25_RS05080;Name=cbrC;gbkey=Gene;gene=cbrC;gene_biotype=protein_coding;locus_tag=AB25_RS05080;old_locus_tag=AB25_4278 NZ_JJMC01000066.1 Protein Homology CDS 62975 63562 . + 0 ID=cds-WP_000193071.1;Parent=gene-AB25_RS05080;Dbxref=GenBank:WP_000193071.1;Name=WP_000193071.1;Ontology_term=GO:0030153;gbkey=CDS;gene=cbrC;go_process=bacteriocin immunity|0030153||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418173.1;locus_tag=AB25_RS05080;product=PF03691 family colicin E2 tolerance protein CbrC;protein_id=WP_000193071.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 63624 64346 . - . ID=gene-AB25_RS05075;Name=yieK;gbkey=Gene;gene=yieK;gene_biotype=protein_coding;locus_tag=AB25_RS05075;old_locus_tag=AB25_4279 NZ_JJMC01000066.1 Protein Homology CDS 63624 64346 . - 0 ID=cds-WP_000766900.1;Parent=gene-AB25_RS05075;Dbxref=GenBank:WP_000766900.1;Name=WP_000766900.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=yieK;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026242.1;locus_tag=AB25_RS05075;product=glucosamine-6-phosphate deaminase;protein_id=WP_000766900.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 64361 65530 . - . ID=gene-AB25_RS05070;Name=yieL;gbkey=Gene;gene=yieL;gene_biotype=protein_coding;locus_tag=AB25_RS05070;old_locus_tag=AB25_4280 NZ_JJMC01000066.1 Protein Homology CDS 64361 65530 . - 0 ID=cds-WP_001295249.1;Parent=gene-AB25_RS05070;Dbxref=GenBank:WP_001295249.1;Name=WP_001295249.1;gbkey=CDS;gene=yieL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418175.3;locus_tag=AB25_RS05070;product=esterase;protein_id=WP_001295249.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 65557 67173 . - . ID=gene-AB25_RS05065;Name=bglH;gbkey=Gene;gene=bglH;gene_biotype=protein_coding;locus_tag=AB25_RS05065;old_locus_tag=AB25_4281 NZ_JJMC01000066.1 Protein Homology CDS 65557 67173 . - 0 ID=cds-WP_032171480.1;Parent=gene-AB25_RS05065;Dbxref=GenBank:WP_032171480.1;Name=WP_032171480.1;gbkey=CDS;gene=bglH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418176.1;locus_tag=AB25_RS05065;product=carbohydrate-specific porin BglH;protein_id=WP_032171480.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 67259 68653 . - . ID=gene-AB25_RS05060;Name=bglB;gbkey=Gene;gene=bglB;gene_biotype=protein_coding;locus_tag=AB25_RS05060;old_locus_tag=AB25_4282 NZ_JJMC01000066.1 Protein Homology CDS 67259 68653 . - 0 ID=cds-WP_000643227.1;Parent=gene-AB25_RS05060;Dbxref=GenBank:WP_000643227.1;Name=WP_000643227.1;gbkey=CDS;gene=bglB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469563.1;locus_tag=AB25_RS05060;product=6-phospho-beta-glucosidase BglB;protein_id=WP_000643227.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 68672 70549 . - . ID=gene-AB25_RS05055;Name=bglF;gbkey=Gene;gene=bglF;gene_biotype=protein_coding;locus_tag=AB25_RS05055;old_locus_tag=AB25_4283 NZ_JJMC01000066.1 Protein Homology CDS 68672 70549 . - 0 ID=cds-WP_000137296.1;Parent=gene-AB25_RS05055;Dbxref=GenBank:WP_000137296.1;Name=WP_000137296.1;gbkey=CDS;gene=bglF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418178.1;locus_tag=AB25_RS05055;product=PTS beta-glucoside transporter subunit IIABC;protein_id=WP_000137296.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 70681 71517 . - . ID=gene-AB25_RS05050;Name=bglG;gbkey=Gene;gene=bglG;gene_biotype=protein_coding;locus_tag=AB25_RS05050;old_locus_tag=AB25_4284 NZ_JJMC01000066.1 Protein Homology CDS 70681 71517 . - 0 ID=cds-WP_001356261.1;Parent=gene-AB25_RS05050;Dbxref=GenBank:WP_001356261.1;Name=WP_001356261.1;Ontology_term=GO:0006355;gbkey=CDS;gene=bglG;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418179.1;locus_tag=AB25_RS05050;product=transcriptional antiterminator BglG;protein_id=WP_001356261.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 71803 72528 . - . ID=gene-AB25_RS05045;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=AB25_RS05045;old_locus_tag=AB25_4286 NZ_JJMC01000066.1 Protein Homology CDS 71803 72528 . - 0 ID=cds-WP_000377786.1;Parent=gene-AB25_RS05045;Dbxref=GenBank:WP_000377786.1;Name=WP_000377786.1;Ontology_term=GO:0030643;gbkey=CDS;gene=phoU;go_process=intracellular phosphate ion homeostasis|0030643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418180.1;locus_tag=AB25_RS05045;product=phosphate signaling complex protein PhoU;protein_id=WP_000377786.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 72543 73316 . - . ID=gene-AB25_RS05040;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=AB25_RS05040;old_locus_tag=AB25_4287 NZ_JJMC01000066.1 Protein Homology CDS 72543 73316 . - 0 ID=cds-WP_000063125.1;Parent=gene-AB25_RS05040;Dbxref=GenBank:WP_000063125.1;Name=WP_000063125.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063125.1;locus_tag=AB25_RS05040;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_000063125.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 73407 74297 . - . ID=gene-AB25_RS05035;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=AB25_RS05035;old_locus_tag=AB25_4288 NZ_JJMC01000066.1 Protein Homology CDS 73407 74297 . - 0 ID=cds-WP_001251991.1;Parent=gene-AB25_RS05035;Dbxref=GenBank:WP_001251991.1;Name=WP_001251991.1;Ontology_term=GO:0035435,GO:0005886;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312689.1;locus_tag=AB25_RS05035;product=phosphate ABC transporter permease PstA;protein_id=WP_001251991.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 74297 75256 . - . ID=gene-AB25_RS05030;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=AB25_RS05030;old_locus_tag=AB25_4289 NZ_JJMC01000066.1 Protein Homology CDS 74297 75256 . - 0 ID=cds-WP_000741620.1;Parent=gene-AB25_RS05030;Dbxref=GenBank:WP_000741620.1;Name=WP_000741620.1;Ontology_term=GO:0006817,GO:0055085,GO:0016020;gbkey=CDS;gene=pstC;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806729.1;locus_tag=AB25_RS05030;product=phosphate ABC transporter permease PstC;protein_id=WP_000741620.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 75343 76383 . - . ID=gene-AB25_RS05025;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=AB25_RS05025;old_locus_tag=AB25_4290 NZ_JJMC01000066.1 Protein Homology CDS 75343 76383 . - 0 ID=cds-WP_000867146.1;Parent=gene-AB25_RS05025;Dbxref=GenBank:WP_000867146.1;Name=WP_000867146.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418184.1;locus_tag=AB25_RS05025;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_000867146.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 76631 77704 . - . ID=gene-AB25_RS05020;Name=lpfD-O113;gbkey=Gene;gene=lpfD-O113;gene_biotype=protein_coding;locus_tag=AB25_RS05020;old_locus_tag=AB25_4291 NZ_JJMC01000066.1 Protein Homology CDS 76631 77704 . - 0 ID=cds-WP_001046030.1;Parent=gene-AB25_RS05020;Dbxref=GenBank:WP_001046030.1;Name=WP_001046030.1;Note=LpfA-O113 is the major subunit of a form of long polar fimbria first described in LEE-negative%2C Shiga toxin-producing enterohemorrhagic Escherichia coli (STEC) of serotype O113:H21. This protein%2C designated LpfD-O113%2C is the minor subunit of this chaperone-usher type fimbrial system.;gbkey=CDS;gene=lpfD-O113;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001685709.1;locus_tag=AB25_RS05020;product=long polar fimbrial minor subunit LpfD-O113;protein_id=WP_001046030.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 77715 80237 . - . ID=gene-AB25_RS05015;Name=lpfC-O113;gbkey=Gene;gene=lpfC-O113;gene_biotype=protein_coding;locus_tag=AB25_RS05015;old_locus_tag=AB25_4292 NZ_JJMC01000066.1 Protein Homology CDS 77715 80237 . - 0 ID=cds-WP_032171484.1;Parent=gene-AB25_RS05015;Dbxref=GenBank:WP_032171484.1;Name=WP_032171484.1;gbkey=CDS;gene=lpfC-O113;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709462.1;locus_tag=AB25_RS05015;product=long polar fimbrial usher protein LpfC-O113;protein_id=WP_032171484.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 80262 80993 . - . ID=gene-AB25_RS05010;Name=lpfB-O113;gbkey=Gene;gene=lpfB-O113;gene_biotype=protein_coding;locus_tag=AB25_RS05010;old_locus_tag=AB25_4293 NZ_JJMC01000066.1 Protein Homology CDS 80262 80993 . - 0 ID=cds-WP_000088114.1;Parent=gene-AB25_RS05010;Dbxref=GenBank:WP_000088114.1;Name=WP_000088114.1;gbkey=CDS;gene=lpfB-O113;inference=COORDINATES: similar to AA sequence:RefSeq:WP_316045823.1;locus_tag=AB25_RS05010;product=long polar fimbrial chaperone LpfB-O113;protein_id=WP_000088114.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 81041 81613 . - . ID=gene-AB25_RS05005;Name=lpfA-O113;gbkey=Gene;gene=lpfA-O113;gene_biotype=protein_coding;locus_tag=AB25_RS05005;old_locus_tag=AB25_4294 NZ_JJMC01000066.1 Protein Homology CDS 81041 81613 . - 0 ID=cds-WP_000827806.1;Parent=gene-AB25_RS05005;Dbxref=GenBank:WP_000827806.1;Name=WP_000827806.1;gbkey=CDS;gene=lpfA-O113;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709540.1;locus_tag=AB25_RS05005;product=long polar fimbria major subunit LpfA-O113;protein_id=WP_000827806.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 81915 83744 . - . ID=gene-AB25_RS05000;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=AB25_RS05000;old_locus_tag=AB25_4295 NZ_JJMC01000066.1 Protein Homology CDS 81915 83744 . - 0 ID=cds-WP_000334099.1;Parent=gene-AB25_RS05000;Dbxref=GenBank:WP_000334099.1;Name=WP_000334099.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=AB25_RS05000;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_000334099.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 83906 85276 . - . ID=gene-AB25_RS04995;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=AB25_RS04995;old_locus_tag=AB25_4296 NZ_JJMC01000066.1 Protein Homology CDS 83906 85276 . - 0 ID=cds-WP_000933736.1;Parent=gene-AB25_RS04995;Dbxref=GenBank:WP_000933736.1;Name=WP_000933736.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312699.1;locus_tag=AB25_RS04995;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_000933736.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 85627 86046 . - . ID=gene-AB25_RS04990;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=AB25_RS04990;old_locus_tag=AB25_4297 NZ_JJMC01000066.1 Protein Homology CDS 85627 86046 . - 0 ID=cds-WP_001251965.1;Parent=gene-AB25_RS04990;Dbxref=GenBank:WP_001251965.1;Name=WP_001251965.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;gene=atpC;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251972.1;locus_tag=AB25_RS04990;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_001251965.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 86067 87449 . - . ID=gene-AB25_RS04985;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=AB25_RS04985;old_locus_tag=AB25_4298 NZ_JJMC01000066.1 Protein Homology CDS 86067 87449 . - 0 ID=cds-WP_000190506.1;Parent=gene-AB25_RS04985;Dbxref=GenBank:WP_000190506.1;Name=WP_000190506.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800291.1;locus_tag=AB25_RS04985;product=F0F1 ATP synthase subunit beta;protein_id=WP_000190506.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 87476 88339 . - . ID=gene-AB25_RS04980;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=AB25_RS04980;old_locus_tag=AB25_4299 NZ_JJMC01000066.1 Protein Homology CDS 87476 88339 . - 0 ID=cds-WP_000896498.1;Parent=gene-AB25_RS04980;Dbxref=GenBank:WP_000896498.1;Name=WP_000896498.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882764.1;locus_tag=AB25_RS04980;product=F0F1 ATP synthase subunit gamma;protein_id=WP_000896498.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 88390 89931 . - . ID=gene-AB25_RS04975;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=AB25_RS04975;old_locus_tag=AB25_4300 NZ_JJMC01000066.1 Protein Homology CDS 88390 89931 . - 0 ID=cds-WP_001176745.1;Parent=gene-AB25_RS04975;Dbxref=GenBank:WP_001176745.1;Name=WP_001176745.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=AB25_RS04975;product=F0F1 ATP synthase subunit alpha;protein_id=WP_001176745.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 89944 90477 . - . ID=gene-AB25_RS04970;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=AB25_RS04970;old_locus_tag=AB25_4301 NZ_JJMC01000066.1 Protein Homology CDS 89944 90477 . - 0 ID=cds-WP_001288587.1;Parent=gene-AB25_RS04970;Dbxref=GenBank:WP_001288587.1;Name=WP_001288587.1;Ontology_term=GO:0015986,GO:0046933,GO:0016020;gbkey=CDS;gene=atpH;go_component=membrane|0016020||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1;locus_tag=AB25_RS04970;product=F0F1 ATP synthase subunit delta;protein_id=WP_001288587.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 90492 90962 . - . ID=gene-AB25_RS04965;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=AB25_RS04965;old_locus_tag=AB25_4302 NZ_JJMC01000066.1 Protein Homology CDS 90492 90962 . - 0 ID=cds-WP_001052219.1;Parent=gene-AB25_RS04965;Dbxref=GenBank:WP_001052219.1;Name=WP_001052219.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpF;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=AB25_RS04965;product=F0F1 ATP synthase subunit B;protein_id=WP_001052219.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 91024 91263 . - . ID=gene-AB25_RS04960;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=AB25_RS04960;old_locus_tag=AB25_4303 NZ_JJMC01000066.1 Protein Homology CDS 91024 91263 . - 0 ID=cds-WP_000429386.1;Parent=gene-AB25_RS04960;Dbxref=GenBank:WP_000429386.1;Name=WP_000429386.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246596.1;locus_tag=AB25_RS04960;product=F0F1 ATP synthase subunit C;protein_id=WP_000429386.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 91310 92125 . - . ID=gene-AB25_RS04955;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=AB25_RS04955;old_locus_tag=AB25_4304 NZ_JJMC01000066.1 Protein Homology CDS 91310 92125 . - 0 ID=cds-WP_000135625.1;Parent=gene-AB25_RS04955;Dbxref=GenBank:WP_000135625.1;Name=WP_000135625.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121454.1;locus_tag=AB25_RS04955;product=F0F1 ATP synthase subunit A;protein_id=WP_000135625.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 92134 92514 . - . ID=gene-AB25_RS0126415;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=AB25_RS0126415 NZ_JJMC01000066.1 Protein Homology CDS 92134 92514 . - 0 ID=cds-WP_001356262.1;Parent=gene-AB25_RS0126415;Dbxref=GenBank:WP_001356262.1;Name=WP_001356262.1;gbkey=CDS;gene=atpI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418195.2;locus_tag=AB25_RS0126415;product=F0F1 ATP synthase subunit I;protein_id=WP_001356262.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 93131 93754 . - . ID=gene-AB25_RS04950;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=AB25_RS04950;old_locus_tag=AB25_4306 NZ_JJMC01000066.1 Protein Homology CDS 93131 93754 . - 0 ID=cds-WP_000932839.1;Parent=gene-AB25_RS04950;Dbxref=GenBank:WP_000932839.1;Name=WP_000932839.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312709.1;locus_tag=AB25_RS04950;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_000932839.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 93818 95707 . - . ID=gene-AB25_RS04945;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=AB25_RS04945;old_locus_tag=AB25_4307 NZ_JJMC01000066.1 Protein Homology CDS 93818 95707 . - 0 ID=cds-WP_000499788.1;Parent=gene-AB25_RS04945;Dbxref=GenBank:WP_000499788.1;Name=WP_000499788.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499793.1;locus_tag=AB25_RS04945;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_000499788.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 96086 96529 . - . ID=gene-AB25_RS04940;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=AB25_RS04940;old_locus_tag=AB25_4308 NZ_JJMC01000066.1 Protein Homology CDS 96086 96529 . - 0 ID=cds-WP_000763729.1;Parent=gene-AB25_RS04940;Dbxref=GenBank:WP_000763729.1;Name=WP_000763729.1;Ontology_term=GO:0010181;gbkey=CDS;gene=mioC;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312711.1;locus_tag=AB25_RS04940;product=FMN-binding protein MioC;protein_id=WP_000763729.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 96619 97077 . - . ID=gene-AB25_RS04935;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=AB25_RS04935;old_locus_tag=AB25_4309 NZ_JJMC01000066.1 Protein Homology CDS 96619 97077 . - 0 ID=cds-WP_000432970.1;Parent=gene-AB25_RS04935;Dbxref=GenBank:WP_000432970.1;Name=WP_000432970.1;Ontology_term=GO:0043565;gbkey=CDS;gene=asnC;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312712.1;locus_tag=AB25_RS04935;product=transcriptional regulator AsnC;protein_id=WP_000432970.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 97229 98221 . + . ID=gene-AB25_RS04930;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=AB25_RS04930;old_locus_tag=AB25_4310 NZ_JJMC01000066.1 Protein Homology CDS 97229 98221 . + 0 ID=cds-WP_000845141.1;Parent=gene-AB25_RS04930;Dbxref=GenBank:WP_000845141.1;Name=WP_000845141.1;Ontology_term=GO:0006529,GO:0004071,GO:0005737;gbkey=CDS;gene=asnA;go_component=cytoplasm|0005737||IEA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312713.1;locus_tag=AB25_RS04930;product=aspartate--ammonia ligase;protein_id=WP_000845141.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 98226 99677 . - . ID=gene-AB25_RS04925;Name=viaA;gbkey=Gene;gene=viaA;gene_biotype=protein_coding;locus_tag=AB25_RS04925;old_locus_tag=AB25_4311 NZ_JJMC01000066.1 Protein Homology CDS 98226 99677 . - 0 ID=cds-WP_000956642.1;Parent=gene-AB25_RS04925;Dbxref=GenBank:WP_000956642.1;Name=WP_000956642.1;gbkey=CDS;gene=viaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312714.1;locus_tag=AB25_RS04925;product=ATPase RavA stimulator ViaA;protein_id=WP_000956642.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 99671 101167 . - . ID=gene-AB25_RS04920;Name=ravA;gbkey=Gene;gene=ravA;gene_biotype=protein_coding;locus_tag=AB25_RS04920;old_locus_tag=AB25_4312 NZ_JJMC01000066.1 Protein Homology CDS 99671 101167 . - 0 ID=cds-WP_001299914.1;Parent=gene-AB25_RS04920;Dbxref=GenBank:WP_001299914.1;Name=WP_001299914.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ravA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418202.4;locus_tag=AB25_RS04920;product=ATPase RavA;protein_id=WP_001299914.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 101390 103258 . + . ID=gene-AB25_RS04915;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;locus_tag=AB25_RS04915;old_locus_tag=AB25_4313 NZ_JJMC01000066.1 Protein Homology CDS 101390 103258 . + 0 ID=cds-WP_000102319.1;Parent=gene-AB25_RS04915;Dbxref=GenBank:WP_000102319.1;Name=WP_000102319.1;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;gene=kup;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102304.1;locus_tag=AB25_RS04915;product=low affinity potassium transporter Kup;protein_id=WP_000102319.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 103425 103844 . + . ID=gene-AB25_RS04910;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=AB25_RS04910;old_locus_tag=AB25_4314 NZ_JJMC01000066.1 Protein Homology CDS 103425 103844 . + 0 ID=cds-WP_001364631.1;Parent=gene-AB25_RS04910;Dbxref=GenBank:WP_001364631.1;Name=WP_001364631.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709562.2;locus_tag=AB25_RS04910;product=D-ribose pyranase;protein_id=WP_001364631.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 103852 105357 . + . ID=gene-AB25_RS04905;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=protein_coding;locus_tag=AB25_RS04905;old_locus_tag=AB25_4315 NZ_JJMC01000066.1 Protein Homology CDS 103852 105357 . + 0 ID=cds-WP_000387756.1;Parent=gene-AB25_RS04905;Dbxref=GenBank:WP_000387756.1;Name=WP_000387756.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rbsA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418205.1;locus_tag=AB25_RS04905;product=ribose ABC transporter ATP-binding protein RbsA;protein_id=WP_000387756.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 105362 106327 . + . ID=gene-AB25_RS04900;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=AB25_RS04900;old_locus_tag=AB25_4316 NZ_JJMC01000066.1 Protein Homology CDS 105362 106327 . + 0 ID=cds-WP_000211858.1;Parent=gene-AB25_RS04900;Dbxref=GenBank:WP_000211858.1;Name=WP_000211858.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=rbsC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002882531.1;locus_tag=AB25_RS04900;product=ribose ABC transporter permease;protein_id=WP_000211858.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 106352 107242 . + . ID=gene-AB25_RS04895;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=protein_coding;locus_tag=AB25_RS04895;old_locus_tag=AB25_4317 NZ_JJMC01000066.1 Protein Homology CDS 106352 107242 . + 0 ID=cds-WP_001056273.1;Parent=gene-AB25_RS04895;Dbxref=GenBank:WP_001056273.1;Name=WP_001056273.1;gbkey=CDS;gene=rbsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312720.1;locus_tag=AB25_RS04895;product=ribose ABC transporter substrate-binding protein RbsB;protein_id=WP_001056273.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 107368 108297 . + . ID=gene-AB25_RS04890;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=AB25_RS04890;old_locus_tag=AB25_4318 NZ_JJMC01000066.1 Protein Homology CDS 107368 108297 . + 0 ID=cds-WP_001300603.1;Parent=gene-AB25_RS04890;Dbxref=GenBank:WP_001300603.1;Name=WP_001300603.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312721.1;locus_tag=AB25_RS04890;product=ribokinase;protein_id=WP_001300603.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 108301 109293 . + . ID=gene-AB25_RS04885;Name=rbsR;gbkey=Gene;gene=rbsR;gene_biotype=protein_coding;locus_tag=AB25_RS04885;old_locus_tag=AB25_4319 NZ_JJMC01000066.1 Protein Homology CDS 108301 109293 . + 0 ID=cds-WP_000224476.1;Parent=gene-AB25_RS04885;Dbxref=GenBank:WP_000224476.1;Name=WP_000224476.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rbsR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312722.1;locus_tag=AB25_RS04885;product=ribose operon transcriptional repressor RbsR;protein_id=WP_000224476.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 109259 110686 . - . ID=gene-AB25_RS04880;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=AB25_RS04880;old_locus_tag=AB25_4320 NZ_JJMC01000066.1 Protein Homology CDS 109259 110686 . - 0 ID=cds-WP_001280887.1;Parent=gene-AB25_RS04880;Dbxref=GenBank:WP_001280887.1;Name=WP_001280887.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418210.1;locus_tag=AB25_RS04880;product=multidrug transporter subunit MdtD;protein_id=WP_001280887.1;transl_table=11 NZ_JJMC01000066.1 RefSeq gene 110709 111401 . - . ID=gene-AB25_RS04875;Name=yieP;gbkey=Gene;gene=yieP;gene_biotype=protein_coding;locus_tag=AB25_RS04875;old_locus_tag=AB25_4321 NZ_JJMC01000066.1 Protein Homology CDS 110709 111401 . - 0 ID=cds-WP_001131169.1;Parent=gene-AB25_RS04875;Dbxref=GenBank:WP_001131169.1;Name=WP_001131169.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=yieP;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312724.2;locus_tag=AB25_RS04875;product=FadR/GntR family transcriptional regulator;protein_id=WP_001131169.1;transl_table=11 ##sequence-region NZ_JJMC01000067.1 1 1197 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000067.1 RefSeq region 1 1197 . + . ID=NZ_JJMC01000067.1:1..1197;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000067.1 RefSeq gene 213 1197 . + . ID=gene-AB25_RS04870;Name=AB25_RS04870;end_range=1197,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB25_RS04870;old_locus_tag=AB25_4322;partial=true NZ_JJMC01000067.1 cmsearch rRNA 213 1197 . + . ID=rna-AB25_RS04870;Parent=gene-AB25_RS04870;Dbxref=RFAM:RF00177;end_range=1197,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS04870;partial=true;product=16S ribosomal RNA NZ_JJMC01000067.1 cmsearch exon 213 1197 . + . ID=exon-AB25_RS04870-1;Parent=rna-AB25_RS04870;Dbxref=RFAM:RF00177;end_range=1197,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS04870;partial=true;product=16S ribosomal RNA ##sequence-region NZ_JJMC01000068.1 1 89803 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000068.1 RefSeq region 1 89803 . + . ID=NZ_JJMC01000068.1:1..89803;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000068.1 RefSeq gene 23 2926 . + . ID=gene-AB25_RS04865;Name=AB25_RS04865;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB25_RS04865;old_locus_tag=AB25_4323 NZ_JJMC01000068.1 cmsearch rRNA 23 2926 . + . ID=rna-AB25_RS04865;Parent=gene-AB25_RS04865;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS04865;product=23S ribosomal RNA NZ_JJMC01000068.1 cmsearch exon 23 2926 . + . ID=exon-AB25_RS04865-1;Parent=rna-AB25_RS04865;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS04865;product=23S ribosomal RNA NZ_JJMC01000068.1 RefSeq gene 3021 3136 . + . ID=gene-AB25_RS04860;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AB25_RS04860;old_locus_tag=AB25_4325 NZ_JJMC01000068.1 cmsearch rRNA 3021 3136 . + . ID=rna-AB25_RS04860;Parent=gene-AB25_RS04860;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS04860;product=5S ribosomal RNA NZ_JJMC01000068.1 cmsearch exon 3021 3136 . + . ID=exon-AB25_RS04860-1;Parent=rna-AB25_RS04860;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS04860;product=5S ribosomal RNA NZ_JJMC01000068.1 RefSeq gene 3191 3267 . + . ID=gene-AB25_RS04855;Name=AB25_RS04855;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS04855;old_locus_tag=AB25_4326 NZ_JJMC01000068.1 tRNAscan-SE tRNA 3191 3267 . + . ID=rna-AB25_RS04855;Parent=gene-AB25_RS04855;anticodon=(pos:3225..3227);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS04855;product=tRNA-Asp NZ_JJMC01000068.1 tRNAscan-SE exon 3191 3267 . + . ID=exon-AB25_RS04855-1;Parent=rna-AB25_RS04855;anticodon=(pos:3225..3227);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS04855;product=tRNA-Asp NZ_JJMC01000068.1 RefSeq gene 3276 3351 . + . ID=gene-AB25_RS04850;Name=AB25_RS04850;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS04850;old_locus_tag=AB25_4327 NZ_JJMC01000068.1 tRNAscan-SE tRNA 3276 3351 . + . ID=rna-AB25_RS04850;Parent=gene-AB25_RS04850;anticodon=(pos:3309..3311);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS04850;product=tRNA-Trp NZ_JJMC01000068.1 tRNAscan-SE exon 3276 3351 . + . ID=exon-AB25_RS04850-1;Parent=rna-AB25_RS04850;anticodon=(pos:3309..3311);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS04850;product=tRNA-Trp NZ_JJMC01000068.1 RefSeq gene 3447 4286 . - . ID=gene-AB25_RS04845;Name=hdfR;gbkey=Gene;gene=hdfR;gene_biotype=protein_coding;locus_tag=AB25_RS04845;old_locus_tag=AB25_4328 NZ_JJMC01000068.1 Protein Homology CDS 3447 4286 . - 0 ID=cds-WP_001406292.1;Parent=gene-AB25_RS04845;Dbxref=GenBank:WP_001406292.1;Name=WP_001406292.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hdfR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312725.1;locus_tag=AB25_RS04845;product=HTH-type transcriptional regulator HdfR;protein_id=WP_001406292.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 4405 4743 . + . ID=gene-AB25_RS04840;Name=maoP;gbkey=Gene;gene=maoP;gene_biotype=protein_coding;locus_tag=AB25_RS04840;old_locus_tag=AB25_4329 NZ_JJMC01000068.1 Protein Homology CDS 4405 4743 . + 0 ID=cds-WP_000841001.1;Parent=gene-AB25_RS04840;Dbxref=GenBank:WP_000841001.1;Name=WP_000841001.1;gbkey=CDS;gene=maoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312726.1;locus_tag=AB25_RS04840;product=macrodomain Ori organization protein MaoP;protein_id=WP_000841001.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 4768 6288 . - . ID=gene-AB25_RS04835;Name=yifB;gbkey=Gene;gene=yifB;gene_biotype=protein_coding;locus_tag=AB25_RS04835;old_locus_tag=AB25_4330 NZ_JJMC01000068.1 Protein Homology CDS 4768 6288 . - 0 ID=cds-WP_000058976.1;Parent=gene-AB25_RS04835;Dbxref=GenBank:WP_000058976.1;Name=WP_000058976.1;Ontology_term=GO:0005524;gbkey=CDS;gene=yifB;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418214.2;locus_tag=AB25_RS04835;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_000058976.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 6641 6739 . + . ID=gene-AB25_RS0126420;Name=ilvL;gbkey=Gene;gene=ilvL;gene_biotype=protein_coding;locus_tag=AB25_RS0126420 NZ_JJMC01000068.1 Protein Homology CDS 6641 6739 . + 0 ID=cds-WP_001311244.1;Parent=gene-AB25_RS0126420;Dbxref=GenBank:WP_001311244.1;Name=WP_001311244.1;Ontology_term=GO:0031556;gbkey=CDS;gene=ilvL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312728.1;locus_tag=AB25_RS0126420;product=ilv operon leader peptide;protein_id=WP_001311244.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 6826 6876 . + . ID=gene-AB25_RS31410;Name=ilvX;gbkey=Gene;gene=ilvX;gene_biotype=protein_coding;locus_tag=AB25_RS31410 NZ_JJMC01000068.1 Protein Homology CDS 6826 6876 . + 0 ID=cds-WP_001387183.1;Parent=gene-AB25_RS31410;Dbxref=GenBank:WP_001387183.1;Name=WP_001387183.1;gbkey=CDS;gene=ilvX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791259.1;locus_tag=AB25_RS31410;product=peptide IlvX;protein_id=WP_001387183.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 6879 8525 . + . ID=gene-AB25_RS04830;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=AB25_RS04830;old_locus_tag=AB25_4331 NZ_JJMC01000068.1 Protein Homology CDS 6879 8525 . + 0 ID=cds-WP_001012619.1;Parent=gene-AB25_RS04830;Dbxref=GenBank:WP_001012619.1;Name=WP_001012619.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001012636.1;locus_tag=AB25_RS04830;product=acetolactate synthase 2 catalytic subunit;protein_id=WP_001012619.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 8522 8785 . + . ID=gene-AB25_RS04825;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=AB25_RS04825;old_locus_tag=AB25_4332 NZ_JJMC01000068.1 Protein Homology CDS 8522 8785 . + 0 ID=cds-WP_000983255.1;Parent=gene-AB25_RS04825;Dbxref=GenBank:WP_000983255.1;Name=WP_000983255.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312730.1;locus_tag=AB25_RS04825;product=acetolactate synthase 2 small subunit;protein_id=WP_000983255.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 8805 9734 . + . ID=gene-AB25_RS04820;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=AB25_RS04820;old_locus_tag=AB25_4333 NZ_JJMC01000068.1 Protein Homology CDS 8805 9734 . + 0 ID=cds-WP_000208520.1;Parent=gene-AB25_RS04820;Dbxref=GenBank:WP_000208520.1;Name=WP_000208520.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;gene=ilvE;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312731.1;locus_tag=AB25_RS04820;product=branched-chain-amino-acid transaminase;protein_id=WP_000208520.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 9799 11649 . + . ID=gene-AB25_RS04815;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=AB25_RS04815;old_locus_tag=AB25_4334 NZ_JJMC01000068.1 Protein Homology CDS 9799 11649 . + 0 ID=cds-WP_001127394.1;Parent=gene-AB25_RS04815;Dbxref=GenBank:WP_001127394.1;Name=WP_001127394.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=AB25_RS04815;product=dihydroxy-acid dehydratase;protein_id=WP_001127394.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 11652 13196 . + . ID=gene-AB25_RS04810;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=AB25_RS04810;old_locus_tag=AB25_4335 NZ_JJMC01000068.1 Protein Homology CDS 11652 13196 . + 0 ID=cds-WP_000785599.1;Parent=gene-AB25_RS04810;Dbxref=GenBank:WP_000785599.1;Name=WP_000785599.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312733.1;locus_tag=AB25_RS04810;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_000785599.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 13193 14083 . - . ID=gene-AB25_RS04805;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=AB25_RS04805;old_locus_tag=AB25_4336 NZ_JJMC01000068.1 Protein Homology CDS 13193 14083 . - 0 ID=cds-WP_000365790.1;Parent=gene-AB25_RS04805;Dbxref=GenBank:WP_000365790.1;Name=WP_000365790.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ilvY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001053418.1;locus_tag=AB25_RS04805;product=HTH-type transcriptional activator IlvY;protein_id=WP_000365790.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 14233 15708 . + . ID=gene-AB25_RS04800;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=AB25_RS04800;old_locus_tag=AB25_4337 NZ_JJMC01000068.1 Protein Homology CDS 14233 15708 . + 0 ID=cds-WP_001356300.1;Parent=gene-AB25_RS04800;Dbxref=GenBank:WP_001356300.1;Name=WP_001356300.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=AB25_RS04800;product=ketol-acid reductoisomerase;protein_id=WP_001356300.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 15795 16076 . - . ID=gene-AB25_RS04795;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=AB25_RS04795;old_locus_tag=AB25_4338 NZ_JJMC01000068.1 Protein Homology CDS 15795 16076 . - 0 ID=cds-WP_032171493.1;Parent=gene-AB25_RS04795;Dbxref=GenBank:WP_032171493.1;Name=WP_032171493.1;gbkey=CDS;gene=ppiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004097481.1;locus_tag=AB25_RS04795;product=peptidylprolyl isomerase PpiC;protein_id=WP_032171493.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 16275 16724 . - . ID=gene-AB25_RS04790;Name=AB25_RS04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS04790;old_locus_tag=AB25_4339 NZ_JJMC01000068.1 Protein Homology CDS 16275 16724 . - 0 ID=cds-WP_000996690.1;Parent=gene-AB25_RS04790;Dbxref=GenBank:WP_000996690.1;Name=WP_000996690.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312737.1;locus_tag=AB25_RS04790;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=WP_000996690.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 16941 18962 . + . ID=gene-AB25_RS04785;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=AB25_RS04785;old_locus_tag=AB25_4340 NZ_JJMC01000068.1 Protein Homology CDS 16941 18962 . + 0 ID=cds-WP_001238869.1;Parent=gene-AB25_RS04785;Dbxref=GenBank:WP_001238869.1;Name=WP_001238869.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;gene=rep;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312738.1;locus_tag=AB25_RS04785;product=DNA helicase Rep;protein_id=WP_001238869.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 19009 20493 . - . ID=gene-AB25_RS04780;Name=gppA;gbkey=Gene;gene=gppA;gene_biotype=protein_coding;locus_tag=AB25_RS04780;old_locus_tag=AB25_4341 NZ_JJMC01000068.1 Protein Homology CDS 19009 20493 . - 0 ID=cds-WP_001356299.1;Parent=gene-AB25_RS04780;Dbxref=GenBank:WP_001356299.1;Name=WP_001356299.1;Ontology_term=GO:0015974,GO:0008894;gbkey=CDS;gene=gppA;go_function=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase activity|0008894||IEA;go_process=guanosine pentaphosphate catabolic process|0015974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312739.1;locus_tag=AB25_RS04780;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;protein_id=WP_001356299.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 20627 21892 . - . ID=gene-AB25_RS04775;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=AB25_RS04775;old_locus_tag=AB25_4342 NZ_JJMC01000068.1 Protein Homology CDS 20627 21892 . - 0 ID=cds-WP_000047499.1;Parent=gene-AB25_RS04775;Dbxref=GenBank:WP_000047499.1;Name=WP_000047499.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=rhlB;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418227.1;locus_tag=AB25_RS04775;product=ATP-dependent RNA helicase RhlB;protein_id=WP_000047499.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 22023 22352 . + . ID=gene-AB25_RS04770;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=AB25_RS04770;old_locus_tag=AB25_4343 NZ_JJMC01000068.1 Protein Homology CDS 22023 22352 . + 0 ID=cds-WP_001280776.1;Parent=gene-AB25_RS04770;Dbxref=GenBank:WP_001280776.1;Name=WP_001280776.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017375425.1;locus_tag=AB25_RS04770;product=thioredoxin TrxA;protein_id=WP_001280776.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 22493 22594 . + . ID=gene-AB25_RS0126425;Name=rhoL;gbkey=Gene;gene=rhoL;gene_biotype=protein_coding;locus_tag=AB25_RS0126425 NZ_JJMC01000068.1 Protein Homology CDS 22493 22594 . + 0 ID=cds-WP_001295255.1;Parent=gene-AB25_RS0126425;Dbxref=GenBank:WP_001295255.1;Name=WP_001295255.1;gbkey=CDS;gene=rhoL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312742.1;locus_tag=AB25_RS0126425;product=rho operon leader peptide RhoL;protein_id=WP_001295255.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 22679 23938 . + . ID=gene-AB25_RS04765;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=AB25_RS04765;old_locus_tag=AB25_4344 NZ_JJMC01000068.1 Protein Homology CDS 22679 23938 . + 0 ID=cds-WP_001054527.1;Parent=gene-AB25_RS04765;Dbxref=GenBank:WP_001054527.1;Name=WP_001054527.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1;locus_tag=AB25_RS04765;product=transcription termination factor Rho;protein_id=WP_001054527.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 24178 25281 . + . ID=gene-AB25_RS04755;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=AB25_RS04755;old_locus_tag=AB25_4346 NZ_JJMC01000068.1 Protein Homology CDS 24178 25281 . + 0 ID=cds-WP_001050960.1;Parent=gene-AB25_RS04755;Dbxref=GenBank:WP_001050960.1;Name=WP_001050960.1;Ontology_term=GO:0009103,GO:0009246,GO:0000287,GO:0016780,GO:0030145,GO:0036380,GO:0009276,GO:0016020;gbkey=CDS;gene=wecA;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,manganese ion binding|0030145||IEA,UDP-N-acetylglucosamine-undecaprenyl-phosphate N-acetylglucosaminephosphotransferase activity|0036380||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418231.1;locus_tag=AB25_RS04755;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WP_001050960.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 25293 26339 . + . ID=gene-AB25_RS04750;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;locus_tag=AB25_RS04750;old_locus_tag=AB25_4347 NZ_JJMC01000068.1 Protein Homology CDS 25293 26339 . + 0 ID=cds-WP_001295256.1;Parent=gene-AB25_RS04750;Dbxref=GenBank:WP_001295256.1;Name=WP_001295256.1;Ontology_term=GO:0009103,GO:0009246,GO:0016020;gbkey=CDS;gene=wzzE;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709589.2;locus_tag=AB25_RS04750;product=ECA polysaccharide chain length modulation protein;protein_id=WP_001295256.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 26395 27525 . + . ID=gene-AB25_RS04745;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=AB25_RS04745;old_locus_tag=AB25_4348 NZ_JJMC01000068.1 Protein Homology CDS 26395 27525 . + 0 ID=cds-WP_000866670.1;Parent=gene-AB25_RS04745;Dbxref=GenBank:WP_000866670.1;Name=WP_000866670.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026253.1;locus_tag=AB25_RS04745;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_000866670.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 27522 28784 . + . ID=gene-AB25_RS04740;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=AB25_RS04740;old_locus_tag=AB25_4349 NZ_JJMC01000068.1 Protein Homology CDS 27522 28784 . + 0 ID=cds-WP_000006621.1;Parent=gene-AB25_RS04740;Dbxref=GenBank:WP_000006621.1;Name=WP_000006621.1;Ontology_term=GO:0009246,GO:0051287,GO:0089714;gbkey=CDS;gene=wecC;go_function=NAD binding|0051287||IEA,UDP-N-acetyl-D-mannosamine dehydrogenase activity|0089714||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312747.1;locus_tag=AB25_RS04740;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_000006621.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 28784 29851 . + . ID=gene-AB25_RS04735;Name=rffG;gbkey=Gene;gene=rffG;gene_biotype=protein_coding;locus_tag=AB25_RS04735;old_locus_tag=AB25_4350 NZ_JJMC01000068.1 Protein Homology CDS 28784 29851 . + 0 ID=cds-WP_001226604.1;Parent=gene-AB25_RS04735;Dbxref=GenBank:WP_001226604.1;Name=WP_001226604.1;Ontology_term=GO:0009225,GO:0008460;gbkey=CDS;gene=rffG;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709592.1;locus_tag=AB25_RS04735;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_001226604.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 29870 30751 . + . ID=gene-AB25_RS04730;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=AB25_RS04730;old_locus_tag=AB25_4351 NZ_JJMC01000068.1 Protein Homology CDS 29870 30751 . + 0 ID=cds-WP_000676056.1;Parent=gene-AB25_RS04730;Dbxref=GenBank:WP_000676056.1;Name=WP_000676056.1;Ontology_term=GO:0000271,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133346.1;locus_tag=AB25_RS04730;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_000676056.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 30729 31403 . + . ID=gene-AB25_RS04725;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=protein_coding;gene_synonym=wecD;locus_tag=AB25_RS04725;old_locus_tag=AB25_4352 NZ_JJMC01000068.1 Protein Homology CDS 30729 31403 . + 0 ID=cds-WP_001145196.1;Parent=gene-AB25_RS04725;Dbxref=GenBank:WP_001145196.1;Name=WP_001145196.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rffC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026256.2;locus_tag=AB25_RS04725;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=WP_001145196.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 31408 32538 . + . ID=gene-AB25_RS04720;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=AB25_RS04720;old_locus_tag=AB25_4353 NZ_JJMC01000068.1 Protein Homology CDS 31408 32538 . + 0 ID=cds-WP_032171496.1;Parent=gene-AB25_RS04720;Dbxref=GenBank:WP_032171496.1;Name=WP_032171496.1;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418238.1;locus_tag=AB25_RS04720;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=WP_032171496.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 32540 33790 . + . ID=gene-AB25_RS04715;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;locus_tag=AB25_RS04715;old_locus_tag=AB25_4354 NZ_JJMC01000068.1 Protein Homology CDS 32540 33790 . + 0 ID=cds-WP_000050265.1;Parent=gene-AB25_RS04715;Dbxref=GenBank:WP_000050265.1;Name=WP_000050265.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzxE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418239.1;locus_tag=AB25_RS04715;product=lipid III flippase WzxE;protein_id=WP_000050265.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 33787 34866 . + . ID=gene-AB25_RS04710;Name=rffT;gbkey=Gene;gene=rffT;gene_biotype=protein_coding;gene_synonym=wecF;locus_tag=AB25_RS04710;old_locus_tag=AB25_4355 NZ_JJMC01000068.1 Protein Homology CDS 33787 34866 . + 0 ID=cds-WP_000217240.1;Parent=gene-AB25_RS04710;Dbxref=GenBank:WP_000217240.1;Name=WP_000217240.1;gbkey=CDS;gene=rffT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709597.1;locus_tag=AB25_RS04710;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=WP_000217240.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 34863 36215 . + . ID=gene-AB25_RS04705;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;locus_tag=AB25_RS04705;old_locus_tag=AB25_4356 NZ_JJMC01000068.1 Protein Homology CDS 34863 36215 . + 0 ID=cds-WP_000055132.1;Parent=gene-AB25_RS04705;Dbxref=GenBank:WP_000055132.1;Name=WP_000055132.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzyE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312754.1;locus_tag=AB25_RS04705;product=ECA oligosaccharide polymerase;protein_id=WP_000055132.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 36218 36958 . + . ID=gene-AB25_RS04700;Name=wecG;gbkey=Gene;gene=wecG;gene_biotype=protein_coding;locus_tag=AB25_RS04700;old_locus_tag=AB25_4357 NZ_JJMC01000068.1 Protein Homology CDS 36218 36958 . + 0 ID=cds-WP_001064038.1;Parent=gene-AB25_RS04700;Dbxref=GenBank:WP_001064038.1;Name=WP_001064038.1;Ontology_term=GO:0047241;gbkey=CDS;gene=wecG;go_function=lipopolysaccharide N-acetylmannosaminouronosyltransferase activity|0047241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418242.1;locus_tag=AB25_RS04700;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=WP_001064038.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 37149 38534 . + . ID=gene-AB25_RS04695;Name=thrP;gbkey=Gene;gene=thrP;gene_biotype=protein_coding;gene_synonym=yifK;locus_tag=AB25_RS04695;old_locus_tag=AB25_4358 NZ_JJMC01000068.1 Protein Homology CDS 37149 38534 . + 0 ID=cds-WP_000774731.1;Parent=gene-AB25_RS04695;Dbxref=GenBank:WP_000774731.1;Name=WP_000774731.1;Ontology_term=GO:0015194,GO:0015195;gbkey=CDS;gene=thrP;go_function=L-serine transmembrane transporter activity|0015194||IEA,L-threonine transmembrane transporter activity|0015195||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312756.1;locus_tag=AB25_RS04695;product=bifunctional threonine/serine APC transporter ThrP;protein_id=WP_000774731.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 38637 38713 . + . ID=gene-AB25_RS04690;Name=AB25_RS04690;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS04690;old_locus_tag=AB25_4359 NZ_JJMC01000068.1 tRNAscan-SE tRNA 38637 38713 . + . ID=rna-AB25_RS04690;Parent=gene-AB25_RS04690;anticodon=(pos:38671..38673);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS04690;product=tRNA-Arg NZ_JJMC01000068.1 tRNAscan-SE exon 38637 38713 . + . ID=exon-AB25_RS04690-1;Parent=rna-AB25_RS04690;anticodon=(pos:38671..38673);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS04690;product=tRNA-Arg NZ_JJMC01000068.1 RefSeq gene 38772 38847 . + . ID=gene-AB25_RS04685;Name=AB25_RS04685;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS04685;old_locus_tag=AB25_4360 NZ_JJMC01000068.1 tRNAscan-SE tRNA 38772 38847 . + . ID=rna-AB25_RS04685;Parent=gene-AB25_RS04685;anticodon=(pos:38805..38807);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS04685;product=tRNA-His NZ_JJMC01000068.1 tRNAscan-SE exon 38772 38847 . + . ID=exon-AB25_RS04685-1;Parent=rna-AB25_RS04685;anticodon=(pos:38805..38807);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS04685;product=tRNA-His NZ_JJMC01000068.1 RefSeq gene 38868 38954 . + . ID=gene-AB25_RS04680;Name=AB25_RS04680;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS04680;old_locus_tag=AB25_4361 NZ_JJMC01000068.1 tRNAscan-SE tRNA 38868 38954 . + . ID=rna-AB25_RS04680;Parent=gene-AB25_RS04680;anticodon=(pos:38902..38904);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS04680;product=tRNA-Leu NZ_JJMC01000068.1 tRNAscan-SE exon 38868 38954 . + . ID=exon-AB25_RS04680-1;Parent=rna-AB25_RS04680;anticodon=(pos:38902..38904);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS04680;product=tRNA-Leu NZ_JJMC01000068.1 RefSeq gene 38997 39073 . + . ID=gene-AB25_RS04675;Name=AB25_RS04675;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS04675;old_locus_tag=AB25_4362 NZ_JJMC01000068.1 tRNAscan-SE tRNA 38997 39073 . + . ID=rna-AB25_RS04675;Parent=gene-AB25_RS04675;anticodon=(pos:39031..39033);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS04675;product=tRNA-Pro NZ_JJMC01000068.1 tRNAscan-SE exon 38997 39073 . + . ID=exon-AB25_RS04675-1;Parent=rna-AB25_RS04675;anticodon=(pos:39031..39033);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS04675;product=tRNA-Pro NZ_JJMC01000068.1 RefSeq gene 39220 40455 . + . ID=gene-AB25_RS04670;Name=aslB;gbkey=Gene;gene=aslB;gene_biotype=protein_coding;locus_tag=AB25_RS04670;old_locus_tag=AB25_4363 NZ_JJMC01000068.1 Protein Homology CDS 39220 40455 . + 0 ID=cds-WP_000941526.1;Parent=gene-AB25_RS04670;Dbxref=GenBank:WP_000941526.1;Name=WP_000941526.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;gene=aslB;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312757.1;locus_tag=AB25_RS04670;product=anaerobic sulfatase maturase;protein_id=WP_000941526.1;transl_table=11 NZ_JJMC01000068.1 RefSeq pseudogene 40563 40700 . - . ID=gene-AB25_RS32065;Name=AB25_RS32065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32065;old_locus_tag=AB25_4364;partial=true;pseudo=true;start_range=.,40563 NZ_JJMC01000068.1 Protein Homology CDS 40563 40700 . - 0 ID=cds-AB25_RS32065;Parent=gene-AB25_RS32065;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312758.1;locus_tag=AB25_RS32065;partial=true;product=arylsulfatase;pseudo=true;start_range=.,40563;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 41379 42575 . - . ID=gene-AB25_RS04660;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=AB25_RS04660;old_locus_tag=AB25_4366 NZ_JJMC01000068.1 Protein Homology CDS 41379 42575 . - 0 ID=cds-WP_000921791.1;Parent=gene-AB25_RS04660;Dbxref=GenBank:WP_000921791.1;Name=WP_000921791.1;Ontology_term=GO:0042168,GO:0005515,GO:0016020;gbkey=CDS;gene=hemY;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=heme metabolic process|0042168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312759.1;locus_tag=AB25_RS04660;product=protoheme IX biogenesis protein HemY;protein_id=WP_000921791.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 42578 43783 . - . ID=gene-AB25_RS04655;Name=hemX;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;locus_tag=AB25_RS04655;old_locus_tag=AB25_4367 NZ_JJMC01000068.1 Protein Homology CDS 42578 43783 . - 0 ID=cds-WP_000139062.1;Parent=gene-AB25_RS04655;Dbxref=GenBank:WP_000139062.1;Name=WP_000139062.1;gbkey=CDS;gene=hemX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312760.1;locus_tag=AB25_RS04655;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_000139062.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 43805 44545 . - . ID=gene-AB25_RS04650;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=AB25_RS04650;old_locus_tag=AB25_4368 NZ_JJMC01000068.1 Protein Homology CDS 43805 44545 . - 0 ID=cds-WP_000026069.1;Parent=gene-AB25_RS04650;Dbxref=GenBank:WP_000026069.1;Name=WP_000026069.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;gene=hemD;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312761.1;locus_tag=AB25_RS04650;product=uroporphyrinogen-III synthase;protein_id=WP_000026069.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 44542 45483 . - . ID=gene-AB25_RS04645;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=AB25_RS04645;old_locus_tag=AB25_4369 NZ_JJMC01000068.1 Protein Homology CDS 44542 45483 . - 0 ID=cds-WP_001314260.1;Parent=gene-AB25_RS04645;Dbxref=GenBank:WP_001314260.1;Name=WP_001314260.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026260.1;locus_tag=AB25_RS04645;product=hydroxymethylbilane synthase;protein_id=WP_001314260.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 45870 48416 . + . ID=gene-AB25_RS04640;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=AB25_RS04640;old_locus_tag=AB25_4370 NZ_JJMC01000068.1 Protein Homology CDS 45870 48416 . + 0 ID=cds-WP_000281680.1;Parent=gene-AB25_RS04640;Dbxref=GenBank:WP_000281680.1;Name=WP_000281680.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cyaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312763.1;locus_tag=AB25_RS04640;product=class I adenylate cyclase;protein_id=WP_000281680.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 48456 48776 . - . ID=gene-AB25_RS04635;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=AB25_RS04635;old_locus_tag=AB25_4371 NZ_JJMC01000068.1 Protein Homology CDS 48456 48776 . - 0 ID=cds-WP_000999947.1;Parent=gene-AB25_RS04635;Dbxref=GenBank:WP_000999947.1;Name=WP_000999947.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999950.1;locus_tag=AB25_RS04635;product=iron donor protein CyaY;protein_id=WP_000999947.1;transl_table=11 NZ_JJMC01000068.1 RefSeq pseudogene 48902 49080 . - . ID=gene-AB25_RS32070;Name=AB25_RS32070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32070;partial=true;pseudo=true;start_range=.,48902 NZ_JJMC01000068.1 Protein Homology CDS 48902 49080 . - 0 ID=cds-AB25_RS32070;Parent=gene-AB25_RS32070;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000580503.1;locus_tag=AB25_RS32070;partial=true;product=DKNYY family protein;pseudo=true;start_range=.,48902;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 49239 49442 . + . ID=gene-AB25_RS04630;Name=lptM;gbkey=Gene;gene=lptM;gene_biotype=protein_coding;gene_synonym=yifL;locus_tag=AB25_RS04630;old_locus_tag=AB25_4373 NZ_JJMC01000068.1 Protein Homology CDS 49239 49442 . + 0 ID=cds-WP_000799889.1;Parent=gene-AB25_RS04630;Dbxref=GenBank:WP_000799889.1;Name=WP_000799889.1;gbkey=CDS;gene=lptM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709615.1;locus_tag=AB25_RS04630;product=LPS translocon maturation chaperone LptM;protein_id=WP_000799889.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 49479 50303 . + . ID=gene-AB25_RS04625;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=AB25_RS04625;old_locus_tag=AB25_4374 NZ_JJMC01000068.1 Protein Homology CDS 49479 50303 . + 0 ID=cds-WP_001160654.1;Parent=gene-AB25_RS04625;Dbxref=GenBank:WP_001160654.1;Name=WP_001160654.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1;locus_tag=AB25_RS04625;product=diaminopimelate epimerase;protein_id=WP_001160654.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 50300 51007 . + . ID=gene-AB25_RS04620;Name=yigA;gbkey=Gene;gene=yigA;gene_biotype=protein_coding;locus_tag=AB25_RS04620;old_locus_tag=AB25_4375 NZ_JJMC01000068.1 Protein Homology CDS 50300 51007 . + 0 ID=cds-WP_000812806.1;Parent=gene-AB25_RS04620;Dbxref=GenBank:WP_000812806.1;Name=WP_000812806.1;gbkey=CDS;gene=yigA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418255.1;locus_tag=AB25_RS04620;product=DUF484 domain-containing protein;protein_id=WP_000812806.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 51004 51900 . + . ID=gene-AB25_RS04615;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=AB25_RS04615;old_locus_tag=AB25_4376 NZ_JJMC01000068.1 Protein Homology CDS 51004 51900 . + 0 ID=cds-WP_000130686.1;Parent=gene-AB25_RS04615;Dbxref=GenBank:WP_000130686.1;Name=WP_000130686.1;Ontology_term=GO:0006310,GO:0007059,GO:0015074,GO:0051301,GO:0003677;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,chromosome segregation|0007059||IEA,DNA integration|0015074||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709618.1;locus_tag=AB25_RS04615;product=tyrosine recombinase XerC;protein_id=WP_000130686.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 51900 52616 . + . ID=gene-AB25_RS04610;Name=yigB;gbkey=Gene;gene=yigB;gene_biotype=protein_coding;locus_tag=AB25_RS04610;old_locus_tag=AB25_4377 NZ_JJMC01000068.1 Protein Homology CDS 51900 52616 . + 0 ID=cds-WP_001213584.1;Parent=gene-AB25_RS04610;Dbxref=GenBank:WP_001213584.1;Name=WP_001213584.1;gbkey=CDS;gene=yigB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418257.1;locus_tag=AB25_RS04610;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;protein_id=WP_001213584.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 52700 54862 . + . ID=gene-AB25_RS04605;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=AB25_RS04605;old_locus_tag=AB25_4378 NZ_JJMC01000068.1 Protein Homology CDS 52700 54862 . + 0 ID=cds-WP_000383407.1;Parent=gene-AB25_RS04605;Dbxref=GenBank:WP_000383407.1;Name=WP_000383407.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524,GO:0016787;gbkey=CDS;gene=uvrD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312770.1;locus_tag=AB25_RS04605;product=DNA helicase II;protein_id=WP_000383407.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 55009 55773 . - . ID=gene-AB25_RS04600;Name=yigE;gbkey=Gene;gene=yigE;gene_biotype=protein_coding;locus_tag=AB25_RS04600;old_locus_tag=AB25_4380 NZ_JJMC01000068.1 Protein Homology CDS 55009 55773 . - 0 ID=cds-WP_000951155.1;Parent=gene-AB25_RS04600;Dbxref=GenBank:WP_000951155.1;Name=WP_000951155.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=yigE;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312772.1;locus_tag=AB25_RS04600;product=phosphodiester glycosidase family protein;protein_id=WP_000951155.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 55935 55991 . + . ID=gene-AB25_RS32325;Name=ysgD;gbkey=Gene;gene=ysgD;gene_biotype=protein_coding;locus_tag=AB25_RS32325 NZ_JJMC01000068.1 Protein Homology CDS 55935 55991 . + 0 ID=cds-WP_211180520.1;Parent=gene-AB25_RS32325;Dbxref=GenBank:WP_211180520.1;Name=WP_211180520.1;gbkey=CDS;gene=ysgD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051213.1;locus_tag=AB25_RS32325;product=protein YsgD;protein_id=WP_211180520.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 56143 57093 . + . ID=gene-AB25_RS04590;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=AB25_RS04590;old_locus_tag=AB25_4382 NZ_JJMC01000068.1 Protein Homology CDS 56143 57093 . + 0 ID=cds-WP_000947159.1;Parent=gene-AB25_RS04590;Dbxref=GenBank:WP_000947159.1;Name=WP_000947159.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095,GO:0016020;gbkey=CDS;gene=corA;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=AB25_RS04590;product=magnesium/cobalt transporter CorA;protein_id=WP_000947159.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 57136 57516 . - . ID=gene-AB25_RS04585;Name=yigF;gbkey=Gene;gene=yigF;gene_biotype=protein_coding;locus_tag=AB25_RS04585;old_locus_tag=AB25_4383 NZ_JJMC01000068.1 Protein Homology CDS 57136 57516 . - 0 ID=cds-WP_000032581.1;Parent=gene-AB25_RS04585;Dbxref=GenBank:WP_000032581.1;Name=WP_000032581.1;gbkey=CDS;gene=yigF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418261.1;locus_tag=AB25_RS04585;product=DUF2628 domain-containing protein;protein_id=WP_000032581.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 57530 57910 . - . ID=gene-AB25_RS04580;Name=yigG;gbkey=Gene;gene=yigG;gene_biotype=protein_coding;locus_tag=AB25_RS04580;old_locus_tag=AB25_4384 NZ_JJMC01000068.1 Protein Homology CDS 57530 57910 . - 0 ID=cds-WP_001399535.1;Parent=gene-AB25_RS04580;Dbxref=GenBank:WP_001399535.1;Name=WP_001399535.1;gbkey=CDS;gene=yigG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418262.2;locus_tag=AB25_RS04580;product=protein YigG;protein_id=WP_001399535.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 58005 58895 . - . ID=gene-AB25_RS04575;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=AB25_RS04575;old_locus_tag=AB25_4385 NZ_JJMC01000068.1 Protein Homology CDS 58005 58895 . - 0 ID=cds-WP_000339104.1;Parent=gene-AB25_RS04575;Dbxref=GenBank:WP_000339104.1;Name=WP_000339104.1;Ontology_term=GO:0016020;gbkey=CDS;gene=rarD;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026262.1;locus_tag=AB25_RS04575;product=EamA family transporter RarD;protein_id=WP_000339104.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 58947 59414 . - . ID=gene-AB25_RS04570;Name=yigI;gbkey=Gene;gene=yigI;gene_biotype=protein_coding;locus_tag=AB25_RS04570;old_locus_tag=AB25_4386 NZ_JJMC01000068.1 Protein Homology CDS 58947 59414 . - 0 ID=cds-WP_001277142.1;Parent=gene-AB25_RS04570;Dbxref=GenBank:WP_001277142.1;Name=WP_001277142.1;gbkey=CDS;gene=yigI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312777.2;locus_tag=AB25_RS04570;product=acyl-CoA thioesterase YigI;protein_id=WP_001277142.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 59579 60448 . + . ID=gene-AB25_RS04565;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=protein_coding;locus_tag=AB25_RS04565;old_locus_tag=AB25_4387 NZ_JJMC01000068.1 Protein Homology CDS 59579 60448 . + 0 ID=cds-WP_001259700.1;Parent=gene-AB25_RS04565;Dbxref=GenBank:WP_001259700.1;Name=WP_001259700.1;Ontology_term=GO:0006629,GO:0004620;gbkey=CDS;gene=pldA;go_function=phospholipase activity|0004620||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312778.1;locus_tag=AB25_RS04565;product=phospholipase A;protein_id=WP_001259700.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 60581 62410 . + . ID=gene-AB25_RS04560;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=AB25_RS04560;old_locus_tag=AB25_4388 NZ_JJMC01000068.1 Protein Homology CDS 60581 62410 . + 0 ID=cds-WP_000035581.1;Parent=gene-AB25_RS04560;Dbxref=GenBank:WP_000035581.1;Name=WP_000035581.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026263.3;locus_tag=AB25_RS04560;product=ATP-dependent DNA helicase RecQ;protein_id=WP_000035581.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 62474 63094 . + . ID=gene-AB25_RS04555;Name=rhtC;gbkey=Gene;gene=rhtC;gene_biotype=protein_coding;locus_tag=AB25_RS04555;old_locus_tag=AB25_4389 NZ_JJMC01000068.1 Protein Homology CDS 62474 63094 . + 0 ID=cds-WP_000928821.1;Parent=gene-AB25_RS04555;Dbxref=GenBank:WP_000928821.1;Name=WP_000928821.1;Ontology_term=GO:0006865;gbkey=CDS;gene=rhtC;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312780.1;locus_tag=AB25_RS04555;product=threonine export protein RhtC;protein_id=WP_000928821.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 63156 63776 . - . ID=gene-AB25_RS04550;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=AB25_RS04550;old_locus_tag=AB25_4390 NZ_JJMC01000068.1 Protein Homology CDS 63156 63776 . - 0 ID=cds-WP_000171710.1;Parent=gene-AB25_RS04550;Dbxref=GenBank:WP_000171710.1;Name=WP_000171710.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=rhtB;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312781.1;locus_tag=AB25_RS04550;product=homoserine/homoserine lactone efflux protein;protein_id=WP_000171710.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 63887 64909 . + . ID=gene-AB25_RS04545;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=AB25_RS04545;old_locus_tag=AB25_4391 NZ_JJMC01000068.1 Protein Homology CDS 63887 64909 . + 0 ID=cds-WP_000487654.1;Parent=gene-AB25_RS04545;Dbxref=GenBank:WP_000487654.1;Name=WP_000487654.1;gbkey=CDS;gene=pldB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026266.1;locus_tag=AB25_RS04545;product=lysophospholipase L2;protein_id=WP_000487654.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 64917 65717 . + . ID=gene-AB25_RS04540;Name=yigL;gbkey=Gene;gene=yigL;gene_biotype=protein_coding;locus_tag=AB25_RS04540;old_locus_tag=AB25_4392 NZ_JJMC01000068.1 Protein Homology CDS 64917 65717 . + 0 ID=cds-WP_000285329.1;Parent=gene-AB25_RS04540;Dbxref=GenBank:WP_000285329.1;Name=WP_000285329.1;gbkey=CDS;gene=yigL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312783.1;locus_tag=AB25_RS04540;product=sugar/pyridoxal phosphate phosphatase YigL;protein_id=WP_000285329.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 65793 66692 . + . ID=gene-AB25_RS0126430;Name=bioP;gbkey=Gene;gene=bioP;gene_biotype=protein_coding;locus_tag=AB25_RS0126430 NZ_JJMC01000068.1 Protein Homology CDS 65793 66692 . + 0 ID=cds-WP_001196238.1;Parent=gene-AB25_RS0126430;Dbxref=GenBank:WP_001196238.1;Name=WP_001196238.1;gbkey=CDS;gene=bioP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312784.1;locus_tag=AB25_RS0126430;product=biotin transporter;protein_id=WP_001196238.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 66580 67533 . - . ID=gene-AB25_RS04535;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=AB25_RS04535;old_locus_tag=AB25_4394 NZ_JJMC01000068.1 Protein Homology CDS 66580 67533 . - 0 ID=cds-WP_000573618.1;Parent=gene-AB25_RS04535;Dbxref=GenBank:WP_000573618.1;Name=WP_000573618.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=metR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312785.1;locus_tag=AB25_RS04535;product=HTH-type transcriptional regulator MetR;protein_id=WP_000573618.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 67651 69912 . + . ID=gene-AB25_RS04530;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=AB25_RS04530;old_locus_tag=AB25_4396 NZ_JJMC01000068.1 Protein Homology CDS 67651 69912 . + 0 ID=cds-WP_000153979.1;Parent=gene-AB25_RS04530;Dbxref=GenBank:WP_000153979.1;Name=WP_000153979.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709635.1;locus_tag=AB25_RS04530;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_000153979.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 69951 70766 . - . ID=gene-AB25_RS04525;Name=ysgA;gbkey=Gene;gene=ysgA;gene_biotype=protein_coding;locus_tag=AB25_RS04525;old_locus_tag=AB25_4397 NZ_JJMC01000068.1 Protein Homology CDS 69951 70766 . - 0 ID=cds-WP_001296987.1;Parent=gene-AB25_RS04525;Dbxref=GenBank:WP_001296987.1;Name=WP_001296987.1;Ontology_term=GO:0016787,GO:0005829;gbkey=CDS;gene=ysgA;go_component=cytosol|0005829||IEA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026268.1;locus_tag=AB25_RS04525;product=dienelactone hydrolase family protein;protein_id=WP_001296987.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 71028 71789 . + . ID=gene-AB25_RS04520;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=AB25_RS04520;old_locus_tag=AB25_4398 NZ_JJMC01000068.1 Protein Homology CDS 71028 71789 . + 0 ID=cds-WP_000045180.1;Parent=gene-AB25_RS04520;Dbxref=GenBank:WP_000045180.1;Name=WP_000045180.1;Ontology_term=GO:0009116,GO:0016763;gbkey=CDS;gene=udp;go_function=pentosyltransferase activity|0016763||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312788.1;locus_tag=AB25_RS04520;product=uridine phosphorylase;protein_id=WP_000045180.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 71930 73357 . + . ID=gene-AB25_RS04515;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=AB25_RS04515;old_locus_tag=AB25_4399 NZ_JJMC01000068.1 Protein Homology CDS 71930 73357 . + 0 ID=cds-WP_000347724.1;Parent=gene-AB25_RS04515;Dbxref=GenBank:WP_000347724.1;Name=WP_000347724.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312789.1;locus_tag=AB25_RS04515;product=DNA recombination protein RmuC;protein_id=WP_000347724.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 73452 74207 . + . ID=gene-AB25_RS04510;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=AB25_RS04510;old_locus_tag=AB25_4400 NZ_JJMC01000068.1 Protein Homology CDS 73452 74207 . + 0 ID=cds-WP_000227958.1;Parent=gene-AB25_RS04510;Dbxref=GenBank:WP_000227958.1;Name=WP_000227958.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312790.1;locus_tag=AB25_RS04510;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_000227958.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 74221 74826 . + . ID=gene-AB25_RS04505;Name=ubiJ;gbkey=Gene;gene=ubiJ;gene_biotype=protein_coding;locus_tag=AB25_RS04505;old_locus_tag=AB25_4401 NZ_JJMC01000068.1 Protein Homology CDS 74221 74826 . + 0 ID=cds-WP_001295259.1;Parent=gene-AB25_RS04505;Dbxref=GenBank:WP_001295259.1;Name=WP_001295259.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiJ;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418278.1;locus_tag=AB25_RS04505;product=ubiquinone biosynthesis protein UbiJ;protein_id=WP_001295259.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 74823 76463 . + . ID=gene-AB25_RS04500;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=AB25_RS04500;old_locus_tag=AB25_4402 NZ_JJMC01000068.1 Protein Homology CDS 74823 76463 . + 0 ID=cds-WP_000187530.1;Parent=gene-AB25_RS04500;Dbxref=GenBank:WP_000187530.1;Name=WP_000187530.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312792.1;locus_tag=AB25_RS04500;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_000187530.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 76542 76811 . + . ID=gene-AB25_RS04495;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=AB25_RS04495;old_locus_tag=AB25_4403 NZ_JJMC01000068.1 Protein Homology CDS 76542 76811 . + 0 ID=cds-WP_001295260.1;Parent=gene-AB25_RS04495;Dbxref=GenBank:WP_001295260.1;Name=WP_001295260.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312793.1;locus_tag=AB25_RS04495;product=Sec-independent protein translocase subunit TatA;protein_id=WP_001295260.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 76815 77330 . + . ID=gene-AB25_RS04490;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=AB25_RS04490;old_locus_tag=AB25_4404 NZ_JJMC01000068.1 Protein Homology CDS 76815 77330 . + 0 ID=cds-WP_000459594.1;Parent=gene-AB25_RS04490;Dbxref=GenBank:WP_000459594.1;Name=WP_000459594.1;Ontology_term=GO:0015628,GO:0008320,GO:0016020;gbkey=CDS;gene=tatB;go_component=membrane|0016020||IEA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312794.1;locus_tag=AB25_RS04490;product=Sec-independent protein translocase protein TatB;protein_id=WP_000459594.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 77333 78109 . + . ID=gene-AB25_RS04485;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=AB25_RS04485;old_locus_tag=AB25_4405 NZ_JJMC01000068.1 Protein Homology CDS 77333 78109 . + 0 ID=cds-WP_000109943.1;Parent=gene-AB25_RS04485;Dbxref=GenBank:WP_000109943.1;Name=WP_000109943.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312795.1;locus_tag=AB25_RS04485;product=Sec-independent protein translocase subunit TatC;protein_id=WP_000109943.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 78151 78933 . + . ID=gene-AB25_RS04480;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=AB25_RS04480;old_locus_tag=AB25_4406 NZ_JJMC01000068.1 Protein Homology CDS 78151 78933 . + 0 ID=cds-WP_001301305.1;Parent=gene-AB25_RS04480;Dbxref=GenBank:WP_001301305.1;Name=WP_001301305.1;Ontology_term=GO:0008408;gbkey=CDS;gene=tatD;go_function=3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312796.1;locus_tag=AB25_RS04480;product=3'-5' ssDNA/RNA exonuclease TatD;protein_id=WP_001301305.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 78930 79418 . - . ID=gene-AB25_RS04475;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=AB25_RS04475;old_locus_tag=AB25_4407 NZ_JJMC01000068.1 Protein Homology CDS 78930 79418 . - 0 ID=cds-WP_001192396.1;Parent=gene-AB25_RS04475;Dbxref=GenBank:WP_001192396.1;Name=WP_001192396.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rfaH;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312797.1;locus_tag=AB25_RS04475;product=transcription/translation regulatory transformer protein RfaH;protein_id=WP_001192396.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 79585 81078 . + . ID=gene-AB25_RS04470;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=AB25_RS04470;old_locus_tag=AB25_4408 NZ_JJMC01000068.1 Protein Homology CDS 79585 81078 . + 0 ID=cds-WP_000339804.1;Parent=gene-AB25_RS04470;Dbxref=GenBank:WP_000339804.1;Name=WP_000339804.1;Ontology_term=GO:0016831;gbkey=CDS;gene=ubiD;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418285.1;locus_tag=AB25_RS04470;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=WP_000339804.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 81124 81825 . + . ID=gene-AB25_RS04465;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;locus_tag=AB25_RS04465;old_locus_tag=AB25_4409 NZ_JJMC01000068.1 Protein Homology CDS 81124 81825 . + 0 ID=cds-WP_000209826.1;Parent=gene-AB25_RS04465;Dbxref=GenBank:WP_000209826.1;Name=WP_000209826.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fre;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312799.1;locus_tag=AB25_RS04465;product=NAD(P)H-flavin reductase;protein_id=WP_000209826.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 82009 83172 . - . ID=gene-AB25_RS04460;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=AB25_RS04460;old_locus_tag=AB25_4410 NZ_JJMC01000068.1 Protein Homology CDS 82009 83172 . - 0 ID=cds-WP_001546068.1;Parent=gene-AB25_RS04460;Dbxref=GenBank:WP_001546068.1;Name=WP_001546068.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadA;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709649.1;locus_tag=AB25_RS04460;product=acetyl-CoA C-acyltransferase FadA;protein_id=WP_001546068.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 83182 85371 . - . ID=gene-AB25_RS04455;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=AB25_RS04455;old_locus_tag=AB25_4411 NZ_JJMC01000068.1 Protein Homology CDS 83182 85371 . - 0 ID=cds-WP_000965979.1;Parent=gene-AB25_RS04455;Dbxref=GenBank:WP_000965979.1;Name=WP_000965979.1;Ontology_term=GO:0009062,GO:0003857,GO:0004165,GO:0004300,GO:0008692,GO:0036125;gbkey=CDS;gene=fadB;go_component=fatty acid beta-oxidation multienzyme complex|0036125||IEA;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,delta(3)-delta(2)-enoyl-CoA isomerase activity|0004165||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418288.1;locus_tag=AB25_RS04455;product=fatty acid oxidation complex subunit alpha FadB;protein_id=WP_000965979.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 85561 86892 . + . ID=gene-AB25_RS04450;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=AB25_RS04450;old_locus_tag=AB25_4412 NZ_JJMC01000068.1 Protein Homology CDS 85561 86892 . + 0 ID=cds-WP_000444561.1;Parent=gene-AB25_RS04450;Dbxref=GenBank:WP_000444561.1;Name=WP_000444561.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418289.1;locus_tag=AB25_RS04450;product=Xaa-Pro dipeptidase;protein_id=WP_000444561.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 86892 87506 . + . ID=gene-AB25_RS04445;Name=yigZ;gbkey=Gene;gene=yigZ;gene_biotype=protein_coding;locus_tag=AB25_RS04445;old_locus_tag=AB25_4413 NZ_JJMC01000068.1 Protein Homology CDS 86892 87506 . + 0 ID=cds-WP_001295262.1;Parent=gene-AB25_RS04445;Dbxref=GenBank:WP_001295262.1;Name=WP_001295262.1;gbkey=CDS;gene=yigZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312803.2;locus_tag=AB25_RS04445;product=IMPACT family protein;protein_id=WP_001295262.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 87545 88996 . + . ID=gene-AB25_RS04440;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=AB25_RS04440;old_locus_tag=AB25_4414 NZ_JJMC01000068.1 Protein Homology CDS 87545 88996 . + 0 ID=cds-WP_000545677.1;Parent=gene-AB25_RS04440;Dbxref=GenBank:WP_000545677.1;Name=WP_000545677.1;gbkey=CDS;gene=trkH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146450.1;locus_tag=AB25_RS04440;product=Trk system potassium transporter TrkH;protein_id=WP_000545677.1;transl_table=11 NZ_JJMC01000068.1 RefSeq gene 89008 89553 . + . ID=gene-AB25_RS04435;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=AB25_RS04435;old_locus_tag=AB25_4415 NZ_JJMC01000068.1 Protein Homology CDS 89008 89553 . + 0 ID=cds-WP_000853959.1;Parent=gene-AB25_RS04435;Dbxref=GenBank:WP_000853959.1;Name=WP_000853959.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312805.1;locus_tag=AB25_RS04435;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=WP_000853959.1;transl_table=11 ##sequence-region NZ_JJMC01000069.1 1 4300 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000069.1 RefSeq region 1 4300 . + . ID=NZ_JJMC01000069.1:1..4300;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000069.1 RefSeq gene 1 748 . + . ID=gene-AB25_RS0126435;Name=AB25_RS0126435;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB25_RS0126435;partial=true;start_range=.,1 NZ_JJMC01000069.1 cmsearch rRNA 1 748 . + . ID=rna-AB25_RS0126435;Parent=gene-AB25_RS0126435;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS0126435;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JJMC01000069.1 cmsearch exon 1 748 . + . ID=exon-AB25_RS0126435-1;Parent=rna-AB25_RS0126435;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS0126435;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JJMC01000069.1 RefSeq gene 920 995 . + . ID=gene-AB25_RS04430;Name=AB25_RS04430;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS04430;old_locus_tag=AB25_4416 NZ_JJMC01000069.1 tRNAscan-SE tRNA 920 995 . + . ID=rna-AB25_RS04430;Parent=gene-AB25_RS04430;anticodon=(pos:954..956);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS04430;product=tRNA-Glu NZ_JJMC01000069.1 tRNAscan-SE exon 920 995 . + . ID=exon-AB25_RS04430-1;Parent=rna-AB25_RS04430;anticodon=(pos:954..956);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS04430;product=tRNA-Glu NZ_JJMC01000069.1 RefSeq gene 1189 4092 . + . ID=gene-AB25_RS0126440;Name=AB25_RS0126440;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB25_RS0126440 NZ_JJMC01000069.1 cmsearch rRNA 1189 4092 . + . ID=rna-AB25_RS0126440;Parent=gene-AB25_RS0126440;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS0126440;product=23S ribosomal RNA NZ_JJMC01000069.1 cmsearch exon 1189 4092 . + . ID=exon-AB25_RS0126440-1;Parent=rna-AB25_RS0126440;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS0126440;product=23S ribosomal RNA NZ_JJMC01000069.1 RefSeq gene 4187 4300 . + . ID=gene-AB25_RS04425;Name=rrf;end_range=4300,.;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AB25_RS04425;old_locus_tag=AB25_4418;partial=true NZ_JJMC01000069.1 cmsearch rRNA 4187 4300 . + . ID=rna-AB25_RS04425;Parent=gene-AB25_RS04425;Dbxref=RFAM:RF00001;end_range=4300,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS04425;partial=true;product=5S ribosomal RNA NZ_JJMC01000069.1 cmsearch exon 4187 4300 . + . ID=exon-AB25_RS04425-1;Parent=rna-AB25_RS04425;Dbxref=RFAM:RF00001;end_range=4300,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS04425;partial=true;product=5S ribosomal RNA ##sequence-region NZ_JJMC01000070.1 1 89561 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000070.1 RefSeq region 1 89561 . + . ID=NZ_JJMC01000070.1:1..89561;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000070.1 RefSeq gene 23 2926 . + . ID=gene-AB25_RS04420;Name=AB25_RS04420;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB25_RS04420;old_locus_tag=AB25_4420 NZ_JJMC01000070.1 cmsearch rRNA 23 2926 . + . ID=rna-AB25_RS04420;Parent=gene-AB25_RS04420;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS04420;product=23S ribosomal RNA NZ_JJMC01000070.1 cmsearch exon 23 2926 . + . ID=exon-AB25_RS04420-1;Parent=rna-AB25_RS04420;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS04420;product=23S ribosomal RNA NZ_JJMC01000070.1 RefSeq gene 3021 3136 . + . ID=gene-AB25_RS04415;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AB25_RS04415;old_locus_tag=AB25_4422 NZ_JJMC01000070.1 cmsearch rRNA 3021 3136 . + . ID=rna-AB25_RS04415;Parent=gene-AB25_RS04415;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS04415;product=5S ribosomal RNA NZ_JJMC01000070.1 cmsearch exon 3021 3136 . + . ID=exon-AB25_RS04415-1;Parent=rna-AB25_RS04415;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS04415;product=5S ribosomal RNA NZ_JJMC01000070.1 RefSeq gene 3240 3767 . - . ID=gene-AB25_RS04410;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=AB25_RS04410;old_locus_tag=AB25_4423 NZ_JJMC01000070.1 Protein Homology CDS 3240 3767 . - 0 ID=cds-WP_000907622.1;Parent=gene-AB25_RS04410;Dbxref=GenBank:WP_000907622.1;Name=WP_000907622.1;Ontology_term=GO:0006777,GO:0005525;gbkey=CDS;gene=mobB;go_function=GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418293.2;locus_tag=AB25_RS04410;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;protein_id=WP_000907622.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 3749 4333 . - . ID=gene-AB25_RS04405;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=AB25_RS04405;old_locus_tag=AB25_4424 NZ_JJMC01000070.1 Protein Homology CDS 3749 4333 . - 0 ID=cds-WP_001052181.1;Parent=gene-AB25_RS04405;Dbxref=GenBank:WP_001052181.1;Name=WP_001052181.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=mobA;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418294.1;locus_tag=AB25_RS04405;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_001052181.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 4403 4672 . + . ID=gene-AB25_RS04400;Name=yihD;gbkey=Gene;gene=yihD;gene_biotype=protein_coding;locus_tag=AB25_RS04400;old_locus_tag=AB25_4425 NZ_JJMC01000070.1 Protein Homology CDS 4403 4672 . + 0 ID=cds-WP_001295263.1;Parent=gene-AB25_RS04400;Dbxref=GenBank:WP_001295263.1;Name=WP_001295263.1;gbkey=CDS;gene=yihD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966571.1;locus_tag=AB25_RS04400;product=YihD family protein;protein_id=WP_001295263.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 4749 5735 . + . ID=gene-AB25_RS04395;Name=srkA;gbkey=Gene;gene=srkA;gene_biotype=protein_coding;locus_tag=AB25_RS04395;old_locus_tag=AB25_4426 NZ_JJMC01000070.1 Protein Homology CDS 4749 5735 . + 0 ID=cds-WP_001065500.1;Parent=gene-AB25_RS04395;Dbxref=GenBank:WP_001065500.1;Name=WP_001065500.1;gbkey=CDS;gene=srkA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312809.1;locus_tag=AB25_RS04395;product=stress response kinase SrkA;protein_id=WP_001065500.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 5752 6378 . + . ID=gene-AB25_RS04390;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=AB25_RS04390;old_locus_tag=AB25_4427 NZ_JJMC01000070.1 Protein Homology CDS 5752 6378 . + 0 ID=cds-WP_000725337.1;Parent=gene-AB25_RS04390;Dbxref=GenBank:WP_000725337.1;Name=WP_000725337.1;Ontology_term=GO:0016491;gbkey=CDS;gene=dsbA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312810.1;locus_tag=AB25_RS04390;product=thiol:disulfide interchange protein DsbA;protein_id=WP_000725337.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 6533 7963 . + . ID=gene-AB25_RS04385;Name=yihF;gbkey=Gene;gene=yihF;gene_biotype=protein_coding;locus_tag=AB25_RS04385;old_locus_tag=AB25_4429 NZ_JJMC01000070.1 Protein Homology CDS 6533 7963 . + 0 ID=cds-WP_000581436.1;Parent=gene-AB25_RS04385;Dbxref=GenBank:WP_000581436.1;Name=WP_000581436.1;gbkey=CDS;gene=yihF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418298.4;locus_tag=AB25_RS04385;product=YdgA family protein;protein_id=WP_000581436.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 8004 8936 . - . ID=gene-AB25_RS04380;Name=yihG;gbkey=Gene;gene=yihG;gene_biotype=protein_coding;locus_tag=AB25_RS04380;old_locus_tag=AB25_4430 NZ_JJMC01000070.1 Protein Homology CDS 8004 8936 . - 0 ID=cds-WP_001303740.1;Parent=gene-AB25_RS04380;Dbxref=GenBank:WP_001303740.1;Name=WP_001303740.1;Ontology_term=GO:0016746;gbkey=CDS;gene=yihG;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312812.1;locus_tag=AB25_RS04380;product=acyltransferase;protein_id=WP_001303740.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 9300 12086 . + . ID=gene-AB25_RS04375;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=AB25_RS04375;old_locus_tag=AB25_4432 NZ_JJMC01000070.1 Protein Homology CDS 9300 12086 . + 0 ID=cds-WP_000250055.1;Parent=gene-AB25_RS04375;Dbxref=GenBank:WP_000250055.1;Name=WP_000250055.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418300.1;locus_tag=AB25_RS04375;product=DNA polymerase I;protein_id=WP_000250055.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 12468 13100 . - . ID=gene-AB25_RS04370;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=AB25_RS04370;old_locus_tag=AB25_4434 NZ_JJMC01000070.1 Protein Homology CDS 12468 13100 . - 0 ID=cds-WP_000183349.1;Parent=gene-AB25_RS04370;Dbxref=GenBank:WP_000183349.1;Name=WP_000183349.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418301.3;locus_tag=AB25_RS04370;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_000183349.1;transl_table=11 NZ_JJMC01000070.1 RefSeq pseudogene 13397 13563 . + . ID=gene-AB25_RS32540;Name=AB25_RS32540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32540;pseudo=true NZ_JJMC01000070.1 Protein Homology CDS 13397 13563 . + 0 ID=cds-AB25_RS32540;Parent=gene-AB25_RS32540;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000546704.1;locus_tag=AB25_RS32540;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 13682 14191 . + . ID=gene-AB25_RS04365;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=protein_coding;locus_tag=AB25_RS04365;old_locus_tag=AB25_4435 NZ_JJMC01000070.1 Protein Homology CDS 13682 14191 . + 0 ID=cds-WP_001350037.1;Parent=gene-AB25_RS04365;Dbxref=GenBank:WP_001350037.1;Name=WP_001350037.1;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418302.1;locus_tag=AB25_RS04365;product=Der GTPase-activating protein YihI;protein_id=WP_001350037.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 14380 15753 . + . ID=gene-AB25_RS04360;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=AB25_RS04360;old_locus_tag=AB25_4437 NZ_JJMC01000070.1 Protein Homology CDS 14380 15753 . + 0 ID=cds-WP_000116090.1;Parent=gene-AB25_RS04360;Dbxref=GenBank:WP_000116090.1;Name=WP_000116090.1;Ontology_term=GO:0006779,GO:0004109,GO:0005737;gbkey=CDS;gene=hemN;go_component=cytoplasm|0005737||IEA;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312816.2;locus_tag=AB25_RS04360;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_000116090.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 15943 16053 . - . ID=gene-AB25_RS0126450;Name=yshB;gbkey=Gene;gene=yshB;gene_biotype=protein_coding;locus_tag=AB25_RS0126450 NZ_JJMC01000070.1 Protein Homology CDS 15943 16053 . - 0 ID=cds-WP_000893994.1;Parent=gene-AB25_RS0126450;Dbxref=GenBank:WP_000893994.1;Name=WP_000893994.1;gbkey=CDS;gene=yshB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791260.1;locus_tag=AB25_RS0126450;product=YshB family small membrane protein;protein_id=WP_000893994.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 16165 17574 . - . ID=gene-AB25_RS04355;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=AB25_RS04355;old_locus_tag=AB25_4439 NZ_JJMC01000070.1 Protein Homology CDS 16165 17574 . - 0 ID=cds-WP_001188776.1;Parent=gene-AB25_RS04355;Dbxref=GenBank:WP_001188776.1;Name=WP_001188776.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=glnG;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133942.1;locus_tag=AB25_RS04355;product=nitrogen regulation protein NR(I);protein_id=WP_001188776.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 17586 18635 . - . ID=gene-AB25_RS04350;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=AB25_RS04350;old_locus_tag=AB25_4440 NZ_JJMC01000070.1 Protein Homology CDS 17586 18635 . - 0 ID=cds-WP_000190577.1;Parent=gene-AB25_RS04350;Dbxref=GenBank:WP_000190577.1;Name=WP_000190577.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312818.1;locus_tag=AB25_RS04350;product=nitrogen regulation protein NR(II);protein_id=WP_000190577.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 18954 20363 . - . ID=gene-AB25_RS04345;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=AB25_RS04345;old_locus_tag=AB25_4441 NZ_JJMC01000070.1 Protein Homology CDS 18954 20363 . - 0 ID=cds-WP_001271717.1;Parent=gene-AB25_RS04345;Dbxref=GenBank:WP_001271717.1;Name=WP_001271717.1;Ontology_term=GO:0006542,GO:0008152,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233234.1;locus_tag=AB25_RS04345;product=glutamate--ammonia ligase;protein_id=WP_001271717.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 20736 22559 . + . ID=gene-AB25_RS04340;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=AB25_RS04340;old_locus_tag=AB25_4442 NZ_JJMC01000070.1 Protein Homology CDS 20736 22559 . + 0 ID=cds-WP_000570668.1;Parent=gene-AB25_RS04340;Dbxref=GenBank:WP_000570668.1;Name=WP_000570668.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312820.1;locus_tag=AB25_RS04340;product=ribosome-dependent GTPase TypA;protein_id=WP_000570668.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 22776 23486 . + . ID=gene-AB25_RS04335;Name=yihL;gbkey=Gene;gene=yihL;gene_biotype=protein_coding;locus_tag=AB25_RS04335;old_locus_tag=AB25_4443 NZ_JJMC01000070.1 Protein Homology CDS 22776 23486 . + 0 ID=cds-WP_000829800.1;Parent=gene-AB25_RS04335;Dbxref=GenBank:WP_000829800.1;Name=WP_000829800.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=yihL;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312821.1;locus_tag=AB25_RS04335;product=GntR family transcriptional regulator;protein_id=WP_000829800.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 23494 24474 . + . ID=gene-AB25_RS04330;Name=yihM;gbkey=Gene;gene=yihM;gene_biotype=protein_coding;locus_tag=AB25_RS04330;old_locus_tag=AB25_4444 NZ_JJMC01000070.1 Protein Homology CDS 23494 24474 . + 0 ID=cds-WP_032171521.1;Parent=gene-AB25_RS04330;Dbxref=GenBank:WP_032171521.1;Name=WP_032171521.1;Ontology_term=GO:0003824,GO:0016853;gbkey=CDS;gene=yihM;go_function=catalytic activity|0003824||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418309.1;locus_tag=AB25_RS04330;product=sugar phosphate isomerase/epimerase family protein;protein_id=WP_032171521.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 24576 25841 . + . ID=gene-AB25_RS04325;Name=yihN;gbkey=Gene;gene=yihN;gene_biotype=protein_coding;locus_tag=AB25_RS04325;old_locus_tag=AB25_4445 NZ_JJMC01000070.1 Protein Homology CDS 24576 25841 . + 0 ID=cds-WP_000956320.1;Parent=gene-AB25_RS04325;Dbxref=GenBank:WP_000956320.1;Name=WP_000956320.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yihN;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312823.1;locus_tag=AB25_RS04325;product=MFS transporter;protein_id=WP_000956320.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 25932 26624 . - . ID=gene-AB25_RS04320;Name=ompL;gbkey=Gene;gene=ompL;gene_biotype=protein_coding;locus_tag=AB25_RS04320;old_locus_tag=AB25_4446 NZ_JJMC01000070.1 Protein Homology CDS 25932 26624 . - 0 ID=cds-WP_032171523.1;Parent=gene-AB25_RS04320;Dbxref=GenBank:WP_032171523.1;Name=WP_032171523.1;gbkey=CDS;gene=ompL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418311.1;locus_tag=AB25_RS04320;product=porin OmpL;protein_id=WP_032171523.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 26692 28095 . - . ID=gene-AB25_RS04315;Name=yihO;gbkey=Gene;gene=yihO;gene_biotype=protein_coding;locus_tag=AB25_RS04315;old_locus_tag=AB25_4447 NZ_JJMC01000070.1 Protein Homology CDS 26692 28095 . - 0 ID=cds-WP_001297066.1;Parent=gene-AB25_RS04315;Dbxref=GenBank:WP_001297066.1;Name=WP_001297066.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=yihO;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026275.1;locus_tag=AB25_RS04315;product=MFS transporter;protein_id=WP_001297066.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 28138 29523 . - . ID=gene-AB25_RS04310;Name=yihP;gbkey=Gene;gene=yihP;gene_biotype=protein_coding;locus_tag=AB25_RS04310;old_locus_tag=AB25_4448 NZ_JJMC01000070.1 Protein Homology CDS 28138 29523 . - 0 ID=cds-WP_000018383.1;Parent=gene-AB25_RS04310;Dbxref=GenBank:WP_000018383.1;Name=WP_000018383.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=yihP;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312826.1;locus_tag=AB25_RS04310;product=MFS transporter;protein_id=WP_000018383.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 29569 31605 . - . ID=gene-AB25_RS04305;Name=yihQ;gbkey=Gene;gene=yihQ;gene_biotype=protein_coding;locus_tag=AB25_RS04305;old_locus_tag=AB25_4449 NZ_JJMC01000070.1 Protein Homology CDS 29569 31605 . - 0 ID=cds-WP_000380826.1;Parent=gene-AB25_RS04305;Dbxref=GenBank:WP_000380826.1;Name=WP_000380826.1;gbkey=CDS;gene=yihQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418314.1;locus_tag=AB25_RS04305;product=sulfoquinovosidase;protein_id=WP_000380826.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 31804 32706 . - . ID=gene-AB25_RS04300;Name=yihR;gbkey=Gene;gene=yihR;gene_biotype=protein_coding;locus_tag=AB25_RS04300;old_locus_tag=AB25_4450 NZ_JJMC01000070.1 Protein Homology CDS 31804 32706 . - 0 ID=cds-WP_001167553.1;Parent=gene-AB25_RS04300;Dbxref=GenBank:WP_001167553.1;Name=WP_001167553.1;gbkey=CDS;gene=yihR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709679.2;locus_tag=AB25_RS04300;product=aldose-1-epimerase;protein_id=WP_001167553.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 32844 34085 . - . ID=gene-AB25_RS04295;Name=yihS;gbkey=Gene;gene=yihS;gene_biotype=protein_coding;locus_tag=AB25_RS04295;old_locus_tag=AB25_4451 NZ_JJMC01000070.1 Protein Homology CDS 32844 34085 . - 0 ID=cds-WP_032171527.1;Parent=gene-AB25_RS04295;Dbxref=GenBank:WP_032171527.1;Name=WP_032171527.1;gbkey=CDS;gene=yihS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418316.4;locus_tag=AB25_RS04295;product=sulfoquinovose isomerase;protein_id=WP_032171527.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 34102 34980 . - . ID=gene-AB25_RS04290;Name=yihT;gbkey=Gene;gene=yihT;gene_biotype=protein_coding;locus_tag=AB25_RS04290;old_locus_tag=AB25_4452 NZ_JJMC01000070.1 Protein Homology CDS 34102 34980 . - 0 ID=cds-WP_032171530.1;Parent=gene-AB25_RS04290;Dbxref=GenBank:WP_032171530.1;Name=WP_032171530.1;gbkey=CDS;gene=yihT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418317.1;locus_tag=AB25_RS04290;product=sulfofructosephosphate aldolase;protein_id=WP_032171530.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 35004 35900 . - . ID=gene-AB25_RS04285;Name=yihU;gbkey=Gene;gene=yihU;gene_biotype=protein_coding;locus_tag=AB25_RS04285;old_locus_tag=AB25_4453 NZ_JJMC01000070.1 Protein Homology CDS 35004 35900 . - 0 ID=cds-WP_000718896.1;Parent=gene-AB25_RS04285;Dbxref=GenBank:WP_000718896.1;Name=WP_000718896.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yihU;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418318.1;locus_tag=AB25_RS04285;product=sulfolactaldehyde 3-reductase;protein_id=WP_000718896.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 36068 36964 . + . ID=gene-AB25_RS04280;Name=yihV;gbkey=Gene;gene=yihV;gene_biotype=protein_coding;locus_tag=AB25_RS04280;old_locus_tag=AB25_4454 NZ_JJMC01000070.1 Protein Homology CDS 36068 36964 . + 0 ID=cds-WP_000621656.1;Parent=gene-AB25_RS04280;Dbxref=GenBank:WP_000621656.1;Name=WP_000621656.1;gbkey=CDS;gene=yihV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418319.2;locus_tag=AB25_RS04280;product=sulfofructose kinase;protein_id=WP_000621656.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 36998 37783 . + . ID=gene-AB25_RS04275;Name=csqR;gbkey=Gene;gene=csqR;gene_biotype=protein_coding;locus_tag=AB25_RS04275;old_locus_tag=AB25_4455 NZ_JJMC01000070.1 Protein Homology CDS 36998 37783 . + 0 ID=cds-WP_000059678.1;Parent=gene-AB25_RS04275;Dbxref=GenBank:WP_000059678.1;Name=WP_000059678.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=csqR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418320.2;locus_tag=AB25_RS04275;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000059678.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 37882 38481 . + . ID=gene-AB25_RS04270;Name=yihX;gbkey=Gene;gene=yihX;gene_biotype=protein_coding;locus_tag=AB25_RS04270;old_locus_tag=AB25_4456 NZ_JJMC01000070.1 Protein Homology CDS 37882 38481 . + 0 ID=cds-WP_001295269.1;Parent=gene-AB25_RS04270;Dbxref=GenBank:WP_001295269.1;Name=WP_001295269.1;gbkey=CDS;gene=yihX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709685.2;locus_tag=AB25_RS04270;product=glucose-1-phosphatase;protein_id=WP_001295269.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 38475 39347 . + . ID=gene-AB25_RS04265;Name=yihY;gbkey=Gene;gene=yihY;gene_biotype=protein_coding;locus_tag=AB25_RS04265;old_locus_tag=AB25_4457 NZ_JJMC01000070.1 Protein Homology CDS 38475 39347 . + 0 ID=cds-WP_000920762.1;Parent=gene-AB25_RS04265;Dbxref=GenBank:WP_000920762.1;Name=WP_000920762.1;gbkey=CDS;gene=yihY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312836.1;locus_tag=AB25_RS04265;product=virulence factor BrkB family protein;protein_id=WP_000920762.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 39344 39781 . + . ID=gene-AB25_RS04260;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=AB25_RS04260;old_locus_tag=AB25_4458 NZ_JJMC01000070.1 Protein Homology CDS 39344 39781 . + 0 ID=cds-WP_000560983.1;Parent=gene-AB25_RS04260;Dbxref=GenBank:WP_000560983.1;Name=WP_000560983.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560980.1;locus_tag=AB25_RS04260;product=D-aminoacyl-tRNA deacylase;protein_id=WP_000560983.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 39826 40767 . + . ID=gene-AB25_RS04255;Name=fabY;gbkey=Gene;gene=fabY;gene_biotype=protein_coding;gene_synonym=yiiD;locus_tag=AB25_RS04255;old_locus_tag=AB25_4459 NZ_JJMC01000070.1 Protein Homology CDS 39826 40767 . + 0 ID=cds-WP_001343389.1;Parent=gene-AB25_RS04255;Dbxref=GenBank:WP_001343389.1;Name=WP_001343389.1;gbkey=CDS;gene=fabY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666856.1;locus_tag=AB25_RS04255;product=fatty acid biosynthesis protein FabY;protein_id=WP_001343389.1;transl_table=11 NZ_JJMC01000070.1 RefSeq pseudogene 41131 41247 . + . ID=gene-AB25_RS33000;Name=AB25_RS33000;end_range=41247,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS33000;partial=true;pseudo=true NZ_JJMC01000070.1 Protein Homology CDS 41131 41247 . + 0 ID=cds-AB25_RS33000;Parent=gene-AB25_RS33000;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=41247,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010904967.1;locus_tag=AB25_RS33000;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 41624 41842 . + . ID=gene-AB25_RS04250;Name=yiiE;gbkey=Gene;gene=yiiE;gene_biotype=protein_coding;locus_tag=AB25_RS04250;old_locus_tag=AB25_4460 NZ_JJMC01000070.1 Protein Homology CDS 41624 41842 . + 0 ID=cds-WP_001295676.1;Parent=gene-AB25_RS04250;Dbxref=GenBank:WP_001295676.1;Name=WP_001295676.1;Ontology_term=GO:0006276,GO:0006355,GO:0032993;gbkey=CDS;gene=yiiE;go_component=protein-DNA complex|0032993||IEA;go_process=plasmid maintenance|0006276||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312842.3;locus_tag=AB25_RS04250;product=CopG family transcriptional regulator;protein_id=WP_001295676.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 42060 42302 . + . ID=gene-AB25_RS04245;Name=yiiF;gbkey=Gene;gene=yiiF;gene_biotype=protein_coding;locus_tag=AB25_RS04245;old_locus_tag=AB25_4461 NZ_JJMC01000070.1 Protein Homology CDS 42060 42302 . + 0 ID=cds-WP_001086388.1;Parent=gene-AB25_RS04245;Dbxref=GenBank:WP_001086388.1;Name=WP_001086388.1;gbkey=CDS;gene=yiiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709694.2;locus_tag=AB25_RS04245;product=protein YiiF;protein_id=WP_001086388.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 42632 43561 . - . ID=gene-AB25_RS04240;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=AB25_RS04240;old_locus_tag=AB25_4462 NZ_JJMC01000070.1 Protein Homology CDS 42632 43561 . - 0 ID=cds-WP_000027705.1;Parent=gene-AB25_RS04240;Dbxref=GenBank:WP_000027705.1;Name=WP_000027705.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121819.1;locus_tag=AB25_RS04240;product=formate dehydrogenase accessory protein FdhE;protein_id=WP_000027705.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 43558 44193 . - . ID=gene-AB25_RS04235;Name=fdoI;gbkey=Gene;gene=fdoI;gene_biotype=protein_coding;locus_tag=AB25_RS04235;old_locus_tag=AB25_4463 NZ_JJMC01000070.1 Protein Homology CDS 43558 44193 . - 0 ID=cds-WP_000829013.1;Parent=gene-AB25_RS04235;Dbxref=GenBank:WP_000829013.1;Name=WP_000829013.1;gbkey=CDS;gene=fdoI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312845.1;locus_tag=AB25_RS04235;product=formate dehydrogenase cytochrome b556 subunit;protein_id=WP_000829013.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 44190 45092 . - . ID=gene-AB25_RS04230;Name=fdoH;gbkey=Gene;gene=fdoH;gene_biotype=protein_coding;locus_tag=AB25_RS04230;old_locus_tag=AB25_4464 NZ_JJMC01000070.1 Protein Homology CDS 44190 45092 . - 0 ID=cds-WP_032288651.1;Parent=gene-AB25_RS04230;Dbxref=GenBank:WP_032288651.1;Name=WP_032288651.1;gbkey=CDS;gene=fdoH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418329.1;locus_tag=AB25_RS04230;product=formate dehydrogenase O subunit beta;protein_id=WP_032288651.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 45105 48155 . - . ID=gene-AB25_RS04225;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=AB25_RS04225;old_locus_tag=AB25_4465 NZ_JJMC01000070.1 Protein Homology CDS 45105 48155 . - 0 ID=cds-WP_011310337.1;Parent=gene-AB25_RS04225;Dbxref=GenBank:WP_011310337.1;Name=WP_011310337.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418330.1;locus_tag=AB25_RS04225;product=formate dehydrogenase-N subunit alpha;protein_id=WP_011310337.1;transl_except=(pos:complement(47568..47570)%2Caa:Sec);transl_table=11 NZ_JJMC01000070.1 RefSeq gene 48349 49182 . + . ID=gene-AB25_RS04215;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=AB25_RS04215;old_locus_tag=AB25_4468 NZ_JJMC01000070.1 Protein Homology CDS 48349 49182 . + 0 ID=cds-WP_000753617.1;Parent=gene-AB25_RS04215;Dbxref=GenBank:WP_000753617.1;Name=WP_000753617.1;Ontology_term=GO:0009061,GO:0015942,GO:0016783,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=sulfurtransferase activity|0016783||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418331.1;locus_tag=AB25_RS04215;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_000753617.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 49335 50375 . + . ID=gene-AB25_RS04210;Name=yiiG;gbkey=Gene;gene=yiiG;gene_biotype=protein_coding;locus_tag=AB25_RS04210;old_locus_tag=AB25_4469 NZ_JJMC01000070.1 Protein Homology CDS 49335 50375 . + 0 ID=cds-WP_001317404.1;Parent=gene-AB25_RS04210;Dbxref=GenBank:WP_001317404.1;Name=WP_001317404.1;gbkey=CDS;gene=yiiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418332.1;locus_tag=AB25_RS04210;product=YiiG family protein;protein_id=WP_001317404.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 50425 52173 . - . ID=gene-AB25_RS04205;Name=frvR;gbkey=Gene;gene=frvR;gene_biotype=protein_coding;locus_tag=AB25_RS04205;old_locus_tag=AB25_4470 NZ_JJMC01000070.1 Protein Homology CDS 50425 52173 . - 0 ID=cds-WP_000931307.1;Parent=gene-AB25_RS04205;Dbxref=GenBank:WP_000931307.1;Name=WP_000931307.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=frvR;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312850.1;locus_tag=AB25_RS04205;product=putative frv operon regulatory protein;protein_id=WP_000931307.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 52173 53243 . - . ID=gene-AB25_RS04200;Name=frvX;gbkey=Gene;gene=frvX;gene_biotype=protein_coding;locus_tag=AB25_RS04200;old_locus_tag=AB25_4471 NZ_JJMC01000070.1 Protein Homology CDS 52173 53243 . - 0 ID=cds-WP_001019454.1;Parent=gene-AB25_RS04200;Dbxref=GenBank:WP_001019454.1;Name=WP_001019454.1;gbkey=CDS;gene=frvX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709702.2;locus_tag=AB25_RS04200;product=aminopeptidase;protein_id=WP_001019454.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 53233 54684 . - . ID=gene-AB25_RS04195;Name=frvB;gbkey=Gene;gene=frvB;gene_biotype=protein_coding;locus_tag=AB25_RS04195;old_locus_tag=AB25_4472 NZ_JJMC01000070.1 Protein Homology CDS 53233 54684 . - 0 ID=cds-WP_000446018.1;Parent=gene-AB25_RS04195;Dbxref=GenBank:WP_000446018.1;Name=WP_000446018.1;gbkey=CDS;gene=frvB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418335.4;locus_tag=AB25_RS04195;product=PTS fructose-like transporter subunit IIBC;protein_id=WP_000446018.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 54695 55141 . - . ID=gene-AB25_RS04190;Name=frvA;gbkey=Gene;gene=frvA;gene_biotype=protein_coding;locus_tag=AB25_RS04190;old_locus_tag=AB25_4473 NZ_JJMC01000070.1 Protein Homology CDS 54695 55141 . - 0 ID=cds-WP_001392901.1;Parent=gene-AB25_RS04190;Dbxref=GenBank:WP_001392901.1;Name=WP_001392901.1;gbkey=CDS;gene=frvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709704.1;locus_tag=AB25_RS04190;product=PTS fructose transporter subunit IIA;protein_id=WP_001392901.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 55442 55756 . - . ID=gene-AB25_RS04185;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=protein_coding;locus_tag=AB25_RS04185;old_locus_tag=AB25_4475 NZ_JJMC01000070.1 Protein Homology CDS 55442 55756 . - 0 ID=cds-WP_000619503.1;Parent=gene-AB25_RS04185;Dbxref=GenBank:WP_000619503.1;Name=WP_000619503.1;Ontology_term=GO:0019299,GO:0016857,GO:0062192,GO:0005737;gbkey=CDS;gene=rhaM;go_component=cytoplasm|0005737||IEA;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA,L-rhamnose mutarotase activity|0062192||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418337.1;locus_tag=AB25_RS04185;product=L-rhamnose mutarotase;protein_id=WP_000619503.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 55766 56590 . - . ID=gene-AB25_RS04180;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=protein_coding;locus_tag=AB25_RS04180;old_locus_tag=AB25_4476 NZ_JJMC01000070.1 Protein Homology CDS 55766 56590 . - 0 ID=cds-WP_001179723.1;Parent=gene-AB25_RS04180;Dbxref=GenBank:WP_001179723.1;Name=WP_001179723.1;gbkey=CDS;gene=rhaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312856.1;locus_tag=AB25_RS04180;product=rhamnulose-1-phosphate aldolase;protein_id=WP_001179723.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 56673 57932 . - . ID=gene-AB25_RS04175;Name=rhaA;gbkey=Gene;gene=rhaA;gene_biotype=protein_coding;locus_tag=AB25_RS04175;old_locus_tag=AB25_4477 NZ_JJMC01000070.1 Protein Homology CDS 56673 57932 . - 0 ID=cds-WP_000211501.1;Parent=gene-AB25_RS04175;Dbxref=GenBank:WP_000211501.1;Name=WP_000211501.1;Ontology_term=GO:0019299,GO:0008740,GO:0030145;gbkey=CDS;gene=rhaA;go_function=L-rhamnose isomerase activity|0008740||IEA,manganese ion binding|0030145||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709707.2;locus_tag=AB25_RS04175;product=L-rhamnose isomerase;protein_id=WP_000211501.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 57929 59398 . - . ID=gene-AB25_RS04170;Name=rhaB;gbkey=Gene;gene=rhaB;gene_biotype=protein_coding;locus_tag=AB25_RS04170;old_locus_tag=AB25_4478 NZ_JJMC01000070.1 Protein Homology CDS 57929 59398 . - 0 ID=cds-WP_000144072.1;Parent=gene-AB25_RS04170;Dbxref=GenBank:WP_000144072.1;Name=WP_000144072.1;Ontology_term=GO:0005975,GO:0019301,GO:0008993;gbkey=CDS;gene=rhaB;go_function=rhamnulokinase activity|0008993||IEA;go_process=carbohydrate metabolic process|0005975||IEA,rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312858.1;locus_tag=AB25_RS04170;product=rhamnulokinase;protein_id=WP_000144072.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 59686 60522 . + . ID=gene-AB25_RS04160;Name=rhaS;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;locus_tag=AB25_RS04160;old_locus_tag=AB25_4480 NZ_JJMC01000070.1 Protein Homology CDS 59686 60522 . + 0 ID=cds-WP_000217139.1;Parent=gene-AB25_RS04160;Dbxref=GenBank:WP_000217139.1;Name=WP_000217139.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418341.1;locus_tag=AB25_RS04160;product=HTH-type transcriptional activator RhaS;protein_id=WP_000217139.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 60596 61444 . + . ID=gene-AB25_RS04155;Name=rhaR;gbkey=Gene;gene=rhaR;gene_biotype=protein_coding;locus_tag=AB25_RS04155;old_locus_tag=AB25_4481 NZ_JJMC01000070.1 Protein Homology CDS 60596 61444 . + 0 ID=cds-WP_001298410.1;Parent=gene-AB25_RS04155;Dbxref=GenBank:WP_001298410.1;Name=WP_001298410.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418342.2;locus_tag=AB25_RS04155;product=HTH-type transcriptional activator RhaR;protein_id=WP_001298410.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 61441 62475 . - . ID=gene-AB25_RS04150;Name=rhaT;gbkey=Gene;gene=rhaT;gene_biotype=protein_coding;locus_tag=AB25_RS04150;old_locus_tag=AB25_4482 NZ_JJMC01000070.1 Protein Homology CDS 61441 62475 . - 0 ID=cds-WP_000063489.1;Parent=gene-AB25_RS04150;Dbxref=GenBank:WP_000063489.1;Name=WP_000063489.1;Ontology_term=GO:0008645,GO:0015153;gbkey=CDS;gene=rhaT;go_function=rhamnose transmembrane transporter activity|0015153||IEA;go_process=hexose transmembrane transport|0008645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418343.1;locus_tag=AB25_RS04150;product=L-rhamnose/proton symporter RhaT;protein_id=WP_000063489.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 62760 63380 . + . ID=gene-AB25_RS04145;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=AB25_RS04145;old_locus_tag=AB25_4483 NZ_JJMC01000070.1 Protein Homology CDS 62760 63380 . + 0 ID=cds-WP_001297064.1;Parent=gene-AB25_RS04145;Dbxref=GenBank:WP_001297064.1;Name=WP_001297064.1;Ontology_term=GO:0006801,GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010345169.1;locus_tag=AB25_RS04145;product=superoxide dismutase [Mn];protein_id=WP_001297064.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 63640 64623 . + . ID=gene-AB25_RS04135;Name=kdgT;gbkey=Gene;gene=kdgT;gene_biotype=protein_coding;locus_tag=AB25_RS04135;old_locus_tag=AB25_4485 NZ_JJMC01000070.1 Protein Homology CDS 63640 64623 . + 0 ID=cds-WP_001166066.1;Parent=gene-AB25_RS04135;Dbxref=GenBank:WP_001166066.1;Name=WP_001166066.1;Ontology_term=GO:0046411,GO:0015649,GO:0016020;gbkey=CDS;gene=kdgT;go_component=membrane|0016020||IEA;go_function=2-keto-3-deoxygluconate:proton symporter activity|0015649||IEA;go_process=2-keto-3-deoxygluconate transmembrane transport|0046411||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709713.2;locus_tag=AB25_RS04135;product=2-keto-3-deoxygluconate transporter;protein_id=WP_001166066.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 64772 65446 . + . ID=gene-AB25_RS04130;Name=yiiM;gbkey=Gene;gene=yiiM;gene_biotype=protein_coding;locus_tag=AB25_RS04130;old_locus_tag=AB25_4486 NZ_JJMC01000070.1 Protein Homology CDS 64772 65446 . + 0 ID=cds-WP_001270266.1;Parent=gene-AB25_RS04130;Dbxref=GenBank:WP_001270266.1;Name=WP_001270266.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;gene=yiiM;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418346.2;locus_tag=AB25_RS04130;product=6-hydroxyaminopurine reductase;protein_id=WP_001270266.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 65552 66925 . - . ID=gene-AB25_RS04125;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=AB25_RS04125;old_locus_tag=AB25_4487 NZ_JJMC01000070.1 Protein Homology CDS 65552 66925 . - 0 ID=cds-WP_000580417.1;Parent=gene-AB25_RS04125;Dbxref=GenBank:WP_000580417.1;Name=WP_000580417.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=cpxA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312864.1;locus_tag=AB25_RS04125;product=envelope stress sensor histidine kinase CpxA;protein_id=WP_000580417.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 66922 67620 . - . ID=gene-AB25_RS04120;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;locus_tag=AB25_RS04120;old_locus_tag=AB25_4488 NZ_JJMC01000070.1 Protein Homology CDS 66922 67620 . - 0 ID=cds-WP_001033722.1;Parent=gene-AB25_RS04120;Dbxref=GenBank:WP_001033722.1;Name=WP_001033722.1;gbkey=CDS;gene=cpxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033718.1;locus_tag=AB25_RS04120;product=envelope stress response regulator transcription factor CpxR;protein_id=WP_001033722.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 67770 68270 . + . ID=gene-AB25_RS04115;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=AB25_RS04115;old_locus_tag=AB25_4489 NZ_JJMC01000070.1 Protein Homology CDS 67770 68270 . + 0 ID=cds-WP_001223800.1;Parent=gene-AB25_RS04115;Dbxref=GenBank:WP_001223800.1;Name=WP_001223800.1;gbkey=CDS;gene=cpxP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026277.1;locus_tag=AB25_RS04115;product=cell-envelope stress modulator CpxP;protein_id=WP_001223800.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 68419 69321 . + . ID=gene-AB25_RS04110;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;locus_tag=AB25_RS04110;old_locus_tag=AB25_4490 NZ_JJMC01000070.1 Protein Homology CDS 68419 69321 . + 0 ID=cds-WP_001076748.1;Parent=gene-AB25_RS04110;Dbxref=GenBank:WP_001076748.1;Name=WP_001076748.1;Note=FieF%2C a metal efflux transporter%2C is a member of the CDF (cation diffusion facilitator) family of transporters.;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;gene=fieF;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709720.2;locus_tag=AB25_RS04110;product=CDF family cation-efflux transporter FieF;protein_id=WP_001076748.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 69502 70464 . + . ID=gene-AB25_RS04105;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=AB25_RS04105;old_locus_tag=AB25_4491 NZ_JJMC01000070.1 Protein Homology CDS 69502 70464 . + 0 ID=cds-WP_000591795.1;Parent=gene-AB25_RS04105;Dbxref=GenBank:WP_000591795.1;Name=WP_000591795.1;Ontology_term=GO:0006002,GO:0006096,GO:0005524;gbkey=CDS;gene=pfkA;go_function=ATP binding|0005524||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072359.1;locus_tag=AB25_RS04105;product=6-phosphofructokinase;protein_id=WP_000591795.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 70784 71773 . + . ID=gene-AB25_RS04100;Name=sbp;gbkey=Gene;gene=sbp;gene_biotype=protein_coding;locus_tag=AB25_RS04100;old_locus_tag=AB25_4492 NZ_JJMC01000070.1 Protein Homology CDS 70784 71773 . + 0 ID=cds-WP_001045690.1;Parent=gene-AB25_RS04100;Dbxref=GenBank:WP_001045690.1;Name=WP_001045690.1;gbkey=CDS;gene=sbp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133064.1;locus_tag=AB25_RS04100;product=sulfate/thiosulfate ABC transporter substrate-binding protein Sbp;protein_id=WP_001045690.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 71880 72635 . + . ID=gene-AB25_RS04095;Name=cdh;gbkey=Gene;gene=cdh;gene_biotype=protein_coding;locus_tag=AB25_RS04095;old_locus_tag=AB25_4493 NZ_JJMC01000070.1 Protein Homology CDS 71880 72635 . + 0 ID=cds-WP_001324361.1;Parent=gene-AB25_RS04095;Dbxref=GenBank:WP_001324361.1;Name=WP_001324361.1;Ontology_term=GO:0008654,GO:0008715,GO:0016020;gbkey=CDS;gene=cdh;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol diphosphatase activity|0008715||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312870.1;locus_tag=AB25_RS04095;product=CDP-diacylglycerol diphosphatase;protein_id=WP_001324361.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 72690 73457 . - . ID=gene-AB25_RS04090;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=AB25_RS04090;old_locus_tag=AB25_4494 NZ_JJMC01000070.1 Protein Homology CDS 72690 73457 . - 0 ID=cds-WP_001216325.1;Parent=gene-AB25_RS04090;Dbxref=GenBank:WP_001216325.1;Name=WP_001216325.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312871.1;locus_tag=AB25_RS04090;product=triose-phosphate isomerase;protein_id=WP_001216325.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 73565 74164 . - . ID=gene-AB25_RS04085;Name=yiiQ;gbkey=Gene;gene=yiiQ;gene_biotype=protein_coding;locus_tag=AB25_RS04085;old_locus_tag=AB25_4495 NZ_JJMC01000070.1 Protein Homology CDS 73565 74164 . - 0 ID=cds-WP_000802226.1;Parent=gene-AB25_RS04085;Dbxref=GenBank:WP_000802226.1;Name=WP_000802226.1;gbkey=CDS;gene=yiiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312872.1;locus_tag=AB25_RS04085;product=YiiQ family protein;protein_id=WP_000802226.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 74265 74705 . + . ID=gene-AB25_RS04080;Name=yiiR;gbkey=Gene;gene=yiiR;gene_biotype=protein_coding;locus_tag=AB25_RS04080;old_locus_tag=AB25_4496 NZ_JJMC01000070.1 Protein Homology CDS 74265 74705 . + 0 ID=cds-WP_000155257.1;Parent=gene-AB25_RS04080;Dbxref=GenBank:WP_000155257.1;Name=WP_000155257.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yiiR;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312873.1;locus_tag=AB25_RS04080;product=DUF805 domain-containing protein;protein_id=WP_000155257.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 74917 75216 . + . ID=gene-AB25_RS04075;Name=yiiS;gbkey=Gene;gene=yiiS;gene_biotype=protein_coding;locus_tag=AB25_RS04075;old_locus_tag=AB25_4497 NZ_JJMC01000070.1 Protein Homology CDS 74917 75216 . + 0 ID=cds-WP_000655986.1;Parent=gene-AB25_RS04075;Dbxref=GenBank:WP_000655986.1;Name=WP_000655986.1;gbkey=CDS;gene=yiiS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312874.1;locus_tag=AB25_RS04075;product=DUF406 domain-containing protein;protein_id=WP_000655986.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 75243 75671 . + . ID=gene-AB25_RS04070;Name=uspD;gbkey=Gene;gene=uspD;gene_biotype=protein_coding;locus_tag=AB25_RS04070;old_locus_tag=AB25_4498 NZ_JJMC01000070.1 Protein Homology CDS 75243 75671 . + 0 ID=cds-WP_000323556.1;Parent=gene-AB25_RS04070;Dbxref=GenBank:WP_000323556.1;Name=WP_000323556.1;gbkey=CDS;gene=uspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418358.1;locus_tag=AB25_RS04070;product=universal stress protein UspD;protein_id=WP_000323556.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 75676 76422 . - . ID=gene-AB25_RS04065;Name=fpr;gbkey=Gene;gene=fpr;gene_biotype=protein_coding;locus_tag=AB25_RS04065;old_locus_tag=AB25_4499 NZ_JJMC01000070.1 Protein Homology CDS 75676 76422 . - 0 ID=cds-WP_000796320.1;Parent=gene-AB25_RS04065;Dbxref=GenBank:WP_000796320.1;Name=WP_000796320.1;Ontology_term=GO:0004324;gbkey=CDS;gene=fpr;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709728.1;locus_tag=AB25_RS04065;product=ferredoxin--NADP(+) reductase;protein_id=WP_000796320.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 76519 77529 . - . ID=gene-AB25_RS04060;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=AB25_RS04060;old_locus_tag=AB25_4500 NZ_JJMC01000070.1 Protein Homology CDS 76519 77529 . - 0 ID=cds-WP_001250644.1;Parent=gene-AB25_RS04060;Dbxref=GenBank:WP_001250644.1;Name=WP_001250644.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418360.1;locus_tag=AB25_RS04060;product=class II fructose-bisphosphatase;protein_id=WP_001250644.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 77662 79170 . - . ID=gene-AB25_RS04055;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=AB25_RS04055;old_locus_tag=AB25_4501 NZ_JJMC01000070.1 Protein Homology CDS 77662 79170 . - 0 ID=cds-WP_000136782.1;Parent=gene-AB25_RS04055;Dbxref=GenBank:WP_000136782.1;Name=WP_000136782.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312878.1;locus_tag=AB25_RS04055;product=glycerol kinase GlpK;protein_id=WP_000136782.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 79193 80038 . - . ID=gene-AB25_RS04050;Name=glpF;gbkey=Gene;gene=glpF;gene_biotype=protein_coding;locus_tag=AB25_RS04050;old_locus_tag=AB25_4502 NZ_JJMC01000070.1 Protein Homology CDS 79193 80038 . - 0 ID=cds-WP_000084268.1;Parent=gene-AB25_RS04050;Dbxref=GenBank:WP_000084268.1;Name=WP_000084268.1;gbkey=CDS;gene=glpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312879.1;locus_tag=AB25_RS04050;product=glycerol uptake facilitator protein GlpF;protein_id=WP_000084268.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 80464 80709 . + . ID=gene-AB25_RS04045;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=AB25_RS04045;old_locus_tag=AB25_4503 NZ_JJMC01000070.1 Protein Homology CDS 80464 80709 . + 0 ID=cds-WP_001296623.1;Parent=gene-AB25_RS04045;Dbxref=GenBank:WP_001296623.1;Name=WP_001296623.1;gbkey=CDS;gene=zapB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418363.1;locus_tag=AB25_RS04045;product=septal ring assembly protein ZapB;protein_id=WP_001296623.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 80794 81279 . - . ID=gene-AB25_RS04040;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=AB25_RS04040;old_locus_tag=AB25_4504 NZ_JJMC01000070.1 Protein Homology CDS 80794 81279 . - 0 ID=cds-WP_000872908.1;Parent=gene-AB25_RS04040;Dbxref=GenBank:WP_000872908.1;Name=WP_000872908.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1;locus_tag=AB25_RS04040;product=ribonuclease E activity regulator RraA;protein_id=WP_000872908.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 81372 82298 . - . ID=gene-AB25_RS04035;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=AB25_RS04035;old_locus_tag=AB25_4505 NZ_JJMC01000070.1 Protein Homology CDS 81372 82298 . - 0 ID=cds-WP_000139496.1;Parent=gene-AB25_RS04035;Dbxref=GenBank:WP_000139496.1;Name=WP_000139496.1;gbkey=CDS;gene=menA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418365.1;locus_tag=AB25_RS04035;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_000139496.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 82365 83696 . - . ID=gene-AB25_RS04030;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=AB25_RS04030;old_locus_tag=AB25_4506 NZ_JJMC01000070.1 Protein Homology CDS 82365 83696 . - 0 ID=cds-WP_001293341.1;Parent=gene-AB25_RS04030;Dbxref=GenBank:WP_001293341.1;Name=WP_001293341.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=AB25_RS04030;product=HslU--HslV peptidase ATPase subunit;protein_id=WP_001293341.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 83706 84236 . - . ID=gene-AB25_RS04025;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=AB25_RS04025;old_locus_tag=AB25_4507 NZ_JJMC01000070.1 Protein Homology CDS 83706 84236 . - 0 ID=cds-WP_000208242.1;Parent=gene-AB25_RS04025;Dbxref=GenBank:WP_000208242.1;Name=WP_000208242.1;Ontology_term=GO:0051603,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312886.1;locus_tag=AB25_RS04025;product=ATP-dependent protease subunit HslV;protein_id=WP_000208242.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 84329 85288 . - . ID=gene-AB25_RS04020;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=AB25_RS04020;old_locus_tag=AB25_4508 NZ_JJMC01000070.1 Protein Homology CDS 84329 85288 . - 0 ID=cds-WP_000068837.1;Parent=gene-AB25_RS04020;Dbxref=GenBank:WP_000068837.1;Name=WP_000068837.1;Ontology_term=GO:0042834;gbkey=CDS;gene=ftsN;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709737.1;locus_tag=AB25_RS04020;product=cell division protein FtsN;protein_id=WP_000068837.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 85380 86405 . - . ID=gene-AB25_RS04015;Name=cytR;gbkey=Gene;gene=cytR;gene_biotype=protein_coding;locus_tag=AB25_RS04015;old_locus_tag=AB25_4509 NZ_JJMC01000070.1 Protein Homology CDS 85380 86405 . - 0 ID=cds-WP_000644904.1;Parent=gene-AB25_RS04015;Dbxref=GenBank:WP_000644904.1;Name=WP_000644904.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=cytR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312888.1;locus_tag=AB25_RS04015;product=DNA-binding transcriptional regulator CytR;protein_id=WP_000644904.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 86561 88759 . - . ID=gene-AB25_RS04010;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=AB25_RS04010;old_locus_tag=AB25_4511 NZ_JJMC01000070.1 Protein Homology CDS 86561 88759 . - 0 ID=cds-WP_001324365.1;Parent=gene-AB25_RS04010;Dbxref=GenBank:WP_001324365.1;Name=WP_001324365.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418370.1;locus_tag=AB25_RS04010;product=primosomal protein N';protein_id=WP_001324365.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 88962 89174 . + . ID=gene-AB25_RS04005;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=AB25_RS04005;old_locus_tag=AB25_4512 NZ_JJMC01000070.1 Protein Homology CDS 88962 89174 . + 0 ID=cds-WP_000710769.1;Parent=gene-AB25_RS04005;Dbxref=GenBank:WP_000710769.1;Name=WP_000710769.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312890.1;locus_tag=AB25_RS04005;product=50S ribosomal protein L31;protein_id=WP_000710769.1;transl_table=11 NZ_JJMC01000070.1 RefSeq gene 89334 89561 . + . ID=gene-AB25_RS04000;Name=AB25_RS04000;end_range=89561,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS04000;old_locus_tag=AB25_4513;partial=true NZ_JJMC01000070.1 Protein Homology CDS 89334 89561 . + 0 ID=cds-WP_000015114.1;Parent=gene-AB25_RS04000;Dbxref=GenBank:WP_000015114.1;Name=WP_000015114.1;end_range=89561,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418050.1;locus_tag=AB25_RS04000;partial=true;product=DUF6531 domain-containing protein;protein_id=WP_000015114.1;transl_table=11 ##sequence-region NZ_JJMC01000071.1 1 43914 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000071.1 RefSeq region 1 43914 . + . ID=NZ_JJMC01000071.1:1..43914;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000071.1 RefSeq gene 1 702 . + . ID=gene-AB25_RS03995;Name=AB25_RS03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS03995;old_locus_tag=AB25_4514;partial=true;start_range=.,1 NZ_JJMC01000071.1 Protein Homology CDS 1 702 . + 0 ID=cds-WP_032296153.1;Parent=gene-AB25_RS03995;Dbxref=GenBank:WP_032296153.1;Name=WP_032296153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312891.1;locus_tag=AB25_RS03995;partial=true;product=RHS repeat-associated core domain-containing protein;protein_id=WP_032296153.1;start_range=.,1;transl_table=11 NZ_JJMC01000071.1 RefSeq gene 704 1027 . + . ID=gene-AB25_RS31815;Name=AB25_RS31815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31815 NZ_JJMC01000071.1 Protein Homology CDS 704 1027 . + 0 ID=cds-WP_001323627.1;Parent=gene-AB25_RS31815;Dbxref=GenBank:WP_001323627.1;Name=WP_001323627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001323627.1;locus_tag=AB25_RS31815;product=RHS element protein dsORF-f3;protein_id=WP_001323627.1;transl_table=11 NZ_JJMC01000071.1 RefSeq pseudogene 1097 1789 . - . ID=gene-AB25_RS30650;Name=AB25_RS30650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS30650;pseudo=true NZ_JJMC01000071.1 Protein Homology CDS 1097 1789 . - 0 ID=cds-AB25_RS30650;Parent=gene-AB25_RS30650;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477181.1;locus_tag=AB25_RS30650;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_JJMC01000071.1 RefSeq gene 1934 2542 . - . ID=gene-AB25_RS03985;Name=yiiX;gbkey=Gene;gene=yiiX;gene_biotype=protein_coding;locus_tag=AB25_RS03985;old_locus_tag=AB25_4516 NZ_JJMC01000071.1 Protein Homology CDS 1934 2542 . - 0 ID=cds-WP_000797341.1;Parent=gene-AB25_RS03985;Dbxref=GenBank:WP_000797341.1;Name=WP_000797341.1;gbkey=CDS;gene=yiiX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312893.1;locus_tag=AB25_RS03985;product=YiiX family permuted papain-like enzyme;protein_id=WP_000797341.1;transl_table=11 NZ_JJMC01000071.1 RefSeq gene 2726 3043 . - . ID=gene-AB25_RS03980;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=AB25_RS03980;old_locus_tag=AB25_4517 NZ_JJMC01000071.1 Protein Homology CDS 2726 3043 . - 0 ID=cds-WP_000852812.1;Parent=gene-AB25_RS03980;Dbxref=GenBank:WP_000852812.1;Name=WP_000852812.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1;locus_tag=AB25_RS03980;product=met regulon transcriptional regulator MetJ;protein_id=WP_000852812.1;transl_table=11 NZ_JJMC01000071.1 RefSeq gene 3320 4480 . + . ID=gene-AB25_RS03975;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=AB25_RS03975;old_locus_tag=AB25_4518 NZ_JJMC01000071.1 Protein Homology CDS 3320 4480 . + 0 ID=cds-WP_001297633.1;Parent=gene-AB25_RS03975;Dbxref=GenBank:WP_001297633.1;Name=WP_001297633.1;Ontology_term=GO:0019346,GO:0003824,GO:0030170;gbkey=CDS;gene=metB;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418374.1;locus_tag=AB25_RS03975;product=cystathionine gamma-synthase;protein_id=WP_001297633.1;transl_table=11 NZ_JJMC01000071.1 RefSeq gene 4483 6915 . + . ID=gene-AB25_RS03970;Name=metL;gbkey=Gene;gene=metL;gene_biotype=protein_coding;locus_tag=AB25_RS03970;old_locus_tag=AB25_4519 NZ_JJMC01000071.1 Protein Homology CDS 4483 6915 . + 0 ID=cds-WP_000110772.1;Parent=gene-AB25_RS03970;Dbxref=GenBank:WP_000110772.1;Name=WP_000110772.1;gbkey=CDS;gene=metL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110794.1;locus_tag=AB25_RS03970;product=bifunctional aspartate kinase/homoserine dehydrogenase II;protein_id=WP_000110772.1;transl_table=11 NZ_JJMC01000071.1 RefSeq gene 7054 7188 . - . ID=gene-AB25_RS32755;Name=AB25_RS32755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32755;old_locus_tag=AB25_4520 NZ_JJMC01000071.1 GeneMarkS-2+ CDS 7054 7188 . - 0 ID=cds-WP_000660586.1;Parent=gene-AB25_RS32755;Dbxref=GenBank:WP_000660586.1;Name=WP_000660586.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB25_RS32755;product=hypothetical protein;protein_id=WP_000660586.1;transl_table=11 NZ_JJMC01000071.1 RefSeq gene 7264 8154 . + . ID=gene-AB25_RS03960;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=AB25_RS03960;old_locus_tag=AB25_4521 NZ_JJMC01000071.1 Protein Homology CDS 7264 8154 . + 0 ID=cds-WP_000007523.1;Parent=gene-AB25_RS03960;Dbxref=GenBank:WP_000007523.1;Name=WP_000007523.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418376.1;locus_tag=AB25_RS03960;product=methylenetetrahydrofolate reductase;protein_id=WP_000007523.1;transl_table=11 NZ_JJMC01000071.1 RefSeq gene 8483 10663 . + . ID=gene-AB25_RS03955;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=AB25_RS03955;old_locus_tag=AB25_4522 NZ_JJMC01000071.1 Protein Homology CDS 8483 10663 . + 0 ID=cds-WP_001297636.1;Parent=gene-AB25_RS03955;Dbxref=GenBank:WP_001297636.1;Name=WP_001297636.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601,GO:0020037;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312898.1;locus_tag=AB25_RS03955;product=catalase/peroxidase HPI;protein_id=WP_001297636.1;transl_table=11 NZ_JJMC01000071.1 RefSeq gene 10757 11662 . + . ID=gene-AB25_RS03950;Name=yijE;gbkey=Gene;gene=yijE;gene_biotype=protein_coding;locus_tag=AB25_RS03950;old_locus_tag=AB25_4523 NZ_JJMC01000071.1 Protein Homology CDS 10757 11662 . + 0 ID=cds-WP_001323623.1;Parent=gene-AB25_RS03950;Dbxref=GenBank:WP_001323623.1;Name=WP_001323623.1;gbkey=CDS;gene=yijE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418378.4;locus_tag=AB25_RS03950;product=cystine transporter YijE;protein_id=WP_001323623.1;transl_table=11 NZ_JJMC01000071.1 RefSeq gene 11689 12306 . - . ID=gene-AB25_RS03945;Name=yijF;gbkey=Gene;gene=yijF;gene_biotype=protein_coding;locus_tag=AB25_RS03945;old_locus_tag=AB25_4524 NZ_JJMC01000071.1 Protein Homology CDS 11689 12306 . - 0 ID=cds-WP_000647877.1;Parent=gene-AB25_RS03945;Dbxref=GenBank:WP_000647877.1;Name=WP_000647877.1;gbkey=CDS;gene=yijF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418379.1;locus_tag=AB25_RS03945;product=DUF1287 domain-containing protein;protein_id=WP_000647877.1;transl_table=11 NZ_JJMC01000071.1 RefSeq gene 12581 13684 . - . ID=gene-AB25_RS03940;Name=gldA;gbkey=Gene;gene=gldA;gene_biotype=protein_coding;locus_tag=AB25_RS03940;old_locus_tag=AB25_4525 NZ_JJMC01000071.1 Protein Homology CDS 12581 13684 . - 0 ID=cds-WP_000374004.1;Parent=gene-AB25_RS03940;Dbxref=GenBank:WP_000374004.1;Name=WP_000374004.1;Ontology_term=GO:0019588,GO:0051596,GO:0008888,GO:0019147;gbkey=CDS;gene=gldA;go_function=glycerol dehydrogenase (NAD+) activity|0008888||IEA,(R)-aminopropanol dehydrogenase activity|0019147||IEA;go_process=anaerobic glycerol catabolic process|0019588||IEA,methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418380.4;locus_tag=AB25_RS03940;product=bifunctional L-1%2C2-propanediol dehydrogenase/glycerol dehydrogenase;protein_id=WP_000374004.1;transl_table=11 NZ_JJMC01000071.1 RefSeq gene 13695 14357 . - . ID=gene-AB25_RS03935;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=AB25_RS03935;old_locus_tag=AB25_4526 NZ_JJMC01000071.1 Protein Homology CDS 13695 14357 . - 0 ID=cds-WP_000424845.1;Parent=gene-AB25_RS03935;Dbxref=GenBank:WP_000424845.1;Name=WP_000424845.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312902.1;locus_tag=AB25_RS03935;product=fructose-6-phosphate aldolase;protein_id=WP_000424845.1;transl_table=11 NZ_JJMC01000071.1 RefSeq gene 14369 16870 . - . ID=gene-AB25_RS03930;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=AB25_RS03930;old_locus_tag=AB25_4527 NZ_JJMC01000071.1 Protein Homology CDS 14369 16870 . - 0 ID=cds-WP_001174083.1;Parent=gene-AB25_RS03930;Dbxref=GenBank:WP_001174083.1;Name=WP_001174083.1;Ontology_term=GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026278.1;locus_tag=AB25_RS03930;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_001174083.1;transl_table=11 NZ_JJMC01000071.1 RefSeq gene 17179 18258 . + . ID=gene-AB25_RS03925;Name=frwC;gbkey=Gene;gene=frwC;gene_biotype=protein_coding;locus_tag=AB25_RS03925;old_locus_tag=AB25_4528 NZ_JJMC01000071.1 Protein Homology CDS 17179 18258 . + 0 ID=cds-WP_001004451.1;Parent=gene-AB25_RS03925;Dbxref=GenBank:WP_001004451.1;Name=WP_001004451.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=frwC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418384.1;locus_tag=AB25_RS03925;product=PTS fructose transporter subunit EIIC;protein_id=WP_001004451.1;transl_table=11 NZ_JJMC01000071.1 RefSeq gene 18273 18593 . + . ID=gene-AB25_RS03920;Name=frwB;gbkey=Gene;gene=frwB;gene_biotype=protein_coding;locus_tag=AB25_RS03920;old_locus_tag=AB25_4529 NZ_JJMC01000071.1 Protein Homology CDS 18273 18593 . + 0 ID=cds-WP_000161265.1;Parent=gene-AB25_RS03920;Dbxref=GenBank:WP_000161265.1;Name=WP_000161265.1;Ontology_term=GO:0009401,GO:0022877;gbkey=CDS;gene=frwB;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312906.1;locus_tag=AB25_RS03920;product=PTS fructose-like transporter subunit IIB;protein_id=WP_000161265.1;transl_table=11 NZ_JJMC01000071.1 RefSeq gene 18644 20941 . + . ID=gene-AB25_RS03915;Name=pflD;gbkey=Gene;gene=pflD;gene_biotype=protein_coding;locus_tag=AB25_RS03915;old_locus_tag=AB25_4530 NZ_JJMC01000071.1 Protein Homology CDS 18644 20941 . + 0 ID=cds-WP_000184822.1;Parent=gene-AB25_RS03915;Dbxref=GenBank:WP_000184822.1;Name=WP_000184822.1;Ontology_term=GO:0003824;gbkey=CDS;gene=pflD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709751.1;locus_tag=AB25_RS03915;product=formate C-acetyltransferase;protein_id=WP_000184822.1;transl_table=11 NZ_JJMC01000071.1 RefSeq gene 20907 21785 . + . ID=gene-AB25_RS03910;Name=pflC;gbkey=Gene;gene=pflC;gene_biotype=protein_coding;locus_tag=AB25_RS03910;old_locus_tag=AB25_4531 NZ_JJMC01000071.1 Protein Homology CDS 20907 21785 . + 0 ID=cds-WP_001588324.1;Parent=gene-AB25_RS03910;Dbxref=GenBank:WP_001588324.1;Name=WP_001588324.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=pflC;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312908.3;locus_tag=AB25_RS03910;product=[formate-C-acetyltransferase]-activating enzyme;protein_id=WP_001588324.1;transl_table=11 NZ_JJMC01000071.1 RefSeq gene 21787 22128 . + . ID=gene-AB25_RS03905;Name=frwD;gbkey=Gene;gene=frwD;gene_biotype=protein_coding;locus_tag=AB25_RS03905;old_locus_tag=AB25_4532 NZ_JJMC01000071.1 Protein Homology CDS 21787 22128 . + 0 ID=cds-WP_000323849.1;Parent=gene-AB25_RS03905;Dbxref=GenBank:WP_000323849.1;Name=WP_000323849.1;gbkey=CDS;gene=frwD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709753.1;locus_tag=AB25_RS03905;product=PTS fructose-like transporter subunit IIB;protein_id=WP_000323849.1;transl_table=11 NZ_JJMC01000071.1 RefSeq gene 22115 22966 . - . ID=gene-AB25_RS03900;Name=yijO;gbkey=Gene;gene=yijO;gene_biotype=protein_coding;locus_tag=AB25_RS03900;old_locus_tag=AB25_4533 NZ_JJMC01000071.1 Protein Homology CDS 22115 22966 . - 0 ID=cds-WP_000274636.1;Parent=gene-AB25_RS03900;Dbxref=GenBank:WP_000274636.1;Name=WP_000274636.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=yijO;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418389.1;locus_tag=AB25_RS03900;product=AraC family transcriptional regulator;protein_id=WP_000274636.1;transl_table=11 NZ_JJMC01000071.1 RefSeq gene 23115 24848 . - . ID=gene-AB25_RS03895;Name=eptC;gbkey=Gene;gene=eptC;gene_biotype=protein_coding;locus_tag=AB25_RS03895;old_locus_tag=AB25_4534 NZ_JJMC01000071.1 Protein Homology CDS 23115 24848 . - 0 ID=cds-WP_000556293.1;Parent=gene-AB25_RS03895;Dbxref=GenBank:WP_000556293.1;Name=WP_000556293.1;gbkey=CDS;gene=eptC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418390.1;locus_tag=AB25_RS03895;product=phosphoethanolamine transferase CptA;protein_id=WP_000556293.1;transl_table=11 NZ_JJMC01000071.1 RefSeq gene 25031 27682 . - . ID=gene-AB25_RS03890;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=AB25_RS03890;old_locus_tag=AB25_4535 NZ_JJMC01000071.1 Protein Homology CDS 25031 27682 . - 0 ID=cds-WP_032296154.1;Parent=gene-AB25_RS03890;Dbxref=GenBank:WP_032296154.1;Name=WP_032296154.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203687.1;locus_tag=AB25_RS03890;product=phosphoenolpyruvate carboxylase;protein_id=WP_032296154.1;transl_table=11 NZ_JJMC01000071.1 RefSeq gene 28034 29185 . - . ID=gene-AB25_RS03885;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=AB25_RS03885;old_locus_tag=AB25_4536 NZ_JJMC01000071.1 Protein Homology CDS 28034 29185 . - 0 ID=cds-WP_001295506.1;Parent=gene-AB25_RS03885;Dbxref=GenBank:WP_001295506.1;Name=WP_001295506.1;Ontology_term=GO:0006526,GO:0019213;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418392.1;locus_tag=AB25_RS03885;product=acetylornithine deacetylase;protein_id=WP_001295506.1;transl_table=11 NZ_JJMC01000071.1 RefSeq gene 29339 30343 . + . ID=gene-AB25_RS03880;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=AB25_RS03880;old_locus_tag=AB25_4537 NZ_JJMC01000071.1 Protein Homology CDS 29339 30343 . + 0 ID=cds-WP_000935370.1;Parent=gene-AB25_RS03880;Dbxref=GenBank:WP_000935370.1;Name=WP_000935370.1;Ontology_term=GO:0006526,GO:0006592,GO:0003942,GO:0070401;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA,NADP+ binding|0070401||IEA;go_process=L-arginine biosynthetic process|0006526||IEA,ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122770.1;locus_tag=AB25_RS03880;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_000935370.1;transl_table=11 NZ_JJMC01000071.1 RefSeq gene 30351 31127 . + . ID=gene-AB25_RS03875;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=AB25_RS03875;old_locus_tag=AB25_4538 NZ_JJMC01000071.1 Protein Homology CDS 30351 31127 . + 0 ID=cds-WP_001302318.1;Parent=gene-AB25_RS03875;Dbxref=GenBank:WP_001302318.1;Name=WP_001302318.1;Ontology_term=GO:0006592,GO:0003991,GO:0005737;gbkey=CDS;gene=argB;go_component=cytoplasm|0005737||IEA;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418394.3;locus_tag=AB25_RS03875;product=acetylglutamate kinase;protein_id=WP_001302318.1;transl_table=11 NZ_JJMC01000071.1 RefSeq gene 31188 32561 . + . ID=gene-AB25_RS03870;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=AB25_RS03870;old_locus_tag=AB25_4539 NZ_JJMC01000071.1 Protein Homology CDS 31188 32561 . + 0 ID=cds-WP_001230081.1;Parent=gene-AB25_RS03870;Dbxref=GenBank:WP_001230081.1;Name=WP_001230081.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709760.1;locus_tag=AB25_RS03870;product=argininosuccinate lyase;protein_id=WP_001230081.1;transl_table=11 NZ_JJMC01000071.1 RefSeq gene 33058 34272 . + . ID=gene-AB25_RS03865;Name=manD;gbkey=Gene;gene=manD;gene_biotype=protein_coding;locus_tag=AB25_RS03865;old_locus_tag=AB25_4540 NZ_JJMC01000071.1 Protein Homology CDS 33058 34272 . + 0 ID=cds-WP_000690934.1;Parent=gene-AB25_RS03865;Dbxref=GenBank:WP_000690934.1;Name=WP_000690934.1;Ontology_term=GO:0016052,GO:0008927;gbkey=CDS;gene=manD;go_function=mannonate dehydratase activity|0008927||IEA;go_process=carbohydrate catabolic process|0016052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001625315.1;locus_tag=AB25_RS03865;product=D-mannonate dehydratase ManD;protein_id=WP_000690934.1;transl_table=11 NZ_JJMC01000071.1 RefSeq gene 34339 35622 . + . ID=gene-AB25_RS03860;Name=AB25_RS03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS03860;old_locus_tag=AB25_4541 NZ_JJMC01000071.1 Protein Homology CDS 34339 35622 . + 0 ID=cds-WP_001715872.1;Parent=gene-AB25_RS03860;Dbxref=GenBank:WP_001715872.1;Name=WP_001715872.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000382182.1;locus_tag=AB25_RS03860;product=MFS transporter;protein_id=WP_001715872.1;transl_table=11 NZ_JJMC01000071.1 RefSeq gene 35874 36791 . + . ID=gene-AB25_RS03855;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=AB25_RS03855;old_locus_tag=AB25_4542 NZ_JJMC01000071.1 Protein Homology CDS 35874 36791 . + 0 ID=cds-WP_001025939.1;Parent=gene-AB25_RS03855;Dbxref=GenBank:WP_001025939.1;Name=WP_001025939.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=oxyR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831323.1;locus_tag=AB25_RS03855;product=DNA-binding transcriptional regulator OxyR;protein_id=WP_001025939.1;transl_table=11 NZ_JJMC01000071.1 RefSeq gene 36774 38174 . - . ID=gene-AB25_RS03850;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=AB25_RS03850;old_locus_tag=AB25_4543 NZ_JJMC01000071.1 Protein Homology CDS 36774 38174 . - 0 ID=cds-WP_001120810.1;Parent=gene-AB25_RS03850;Dbxref=GenBank:WP_001120810.1;Name=WP_001120810.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (Si-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418397.2;locus_tag=AB25_RS03850;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=WP_001120810.1;transl_table=11 NZ_JJMC01000071.1 RefSeq gene 38549 39154 . + . ID=gene-AB25_RS03845;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=AB25_RS03845;old_locus_tag=AB25_4546 NZ_JJMC01000071.1 Protein Homology CDS 38549 39154 . + 0 ID=cds-WP_071703722.1;Parent=gene-AB25_RS03845;Dbxref=GenBank:WP_071703722.1;Name=WP_071703722.1;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001694402.1;locus_tag=AB25_RS03845;product=HTH-type transcriptional repressor FabR;protein_id=WP_071703722.1;transl_table=11 NZ_JJMC01000071.1 RefSeq gene 39154 39513 . + . ID=gene-AB25_RS03840;Name=yijD;gbkey=Gene;gene=yijD;gene_biotype=protein_coding;locus_tag=AB25_RS03840;old_locus_tag=AB25_4547 NZ_JJMC01000071.1 Protein Homology CDS 39154 39513 . + 0 ID=cds-WP_000806411.1;Parent=gene-AB25_RS03840;Dbxref=GenBank:WP_000806411.1;Name=WP_000806411.1;gbkey=CDS;gene=yijD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312922.1;locus_tag=AB25_RS03840;product=YijD family membrane protein;protein_id=WP_000806411.1;transl_table=11 NZ_JJMC01000071.1 RefSeq gene 39553 40653 . - . ID=gene-AB25_RS03835;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=AB25_RS03835;old_locus_tag=AB25_4548 NZ_JJMC01000071.1 Protein Homology CDS 39553 40653 . - 0 ID=cds-WP_000187022.1;Parent=gene-AB25_RS03835;Dbxref=GenBank:WP_000187022.1;Name=WP_000187022.1;Ontology_term=GO:0006396,GO:0030697;gbkey=CDS;gene=trmA;go_function=tRNA (uracil(54)-C5)-methyltransferase activity%2C S-adenosyl methionine-dependent|0030697||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418400.1;locus_tag=AB25_RS03835;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=WP_000187022.1;transl_table=11 NZ_JJMC01000071.1 cmsearch riboswitch 40767 40956 . + . ID=id-NZ_JJMC01000071.1:40767..40956;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JJMC01000071.1 RefSeq gene 41022 42866 . + . ID=gene-AB25_RS03830;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=AB25_RS03830;old_locus_tag=AB25_4549 NZ_JJMC01000071.1 Protein Homology CDS 41022 42866 . + 0 ID=cds-WP_000591355.1;Parent=gene-AB25_RS03830;Dbxref=GenBank:WP_000591355.1;Name=WP_000591355.1;Ontology_term=GO:0015889,GO:0015420;gbkey=CDS;gene=btuB;go_function=ABC-type vitamin B12 transporter activity|0015420||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418401.1;locus_tag=AB25_RS03830;product=TonB-dependent vitamin B12 receptor BtuB;protein_id=WP_000591355.1;transl_table=11 NZ_JJMC01000071.1 RefSeq gene 42811 43668 . + . ID=gene-AB25_RS03825;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=AB25_RS03825;old_locus_tag=AB25_4550 NZ_JJMC01000071.1 Protein Homology CDS 42811 43668 . + 0 ID=cds-WP_000201827.1;Parent=gene-AB25_RS03825;Dbxref=GenBank:WP_000201827.1;Name=WP_000201827.1;Ontology_term=GO:0008152,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312925.2;locus_tag=AB25_RS03825;product=glutamate racemase;protein_id=WP_000201827.1;transl_table=11 ##sequence-region NZ_JJMC01000072.1 1 6636 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000072.1 RefSeq region 1 6636 . + . ID=NZ_JJMC01000072.1:1..6636;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000072.1 RefSeq gene 23 2926 . + . ID=gene-AB25_RS03820;Name=AB25_RS03820;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB25_RS03820;old_locus_tag=AB25_4551 NZ_JJMC01000072.1 cmsearch rRNA 23 2926 . + . ID=rna-AB25_RS03820;Parent=gene-AB25_RS03820;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS03820;product=23S ribosomal RNA NZ_JJMC01000072.1 cmsearch exon 23 2926 . + . ID=exon-AB25_RS03820-1;Parent=rna-AB25_RS03820;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS03820;product=23S ribosomal RNA NZ_JJMC01000072.1 RefSeq gene 3021 3136 . + . ID=gene-AB25_RS03815;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AB25_RS03815;old_locus_tag=AB25_4553 NZ_JJMC01000072.1 cmsearch rRNA 3021 3136 . + . ID=rna-AB25_RS03815;Parent=gene-AB25_RS03815;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS03815;product=5S ribosomal RNA NZ_JJMC01000072.1 cmsearch exon 3021 3136 . + . ID=exon-AB25_RS03815-1;Parent=rna-AB25_RS03815;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS03815;product=5S ribosomal RNA NZ_JJMC01000072.1 RefSeq gene 3271 4299 . + . ID=gene-AB25_RS03810;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=AB25_RS03810;old_locus_tag=AB25_4554 NZ_JJMC01000072.1 Protein Homology CDS 3271 4299 . + 0 ID=cds-WP_001016666.1;Parent=gene-AB25_RS03810;Dbxref=GenBank:WP_001016666.1;Name=WP_001016666.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312926.1;locus_tag=AB25_RS03810;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_001016666.1;transl_table=11 NZ_JJMC01000072.1 RefSeq gene 4296 5261 . + . ID=gene-AB25_RS03805;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=AB25_RS03805;old_locus_tag=AB25_4555 NZ_JJMC01000072.1 Protein Homology CDS 4296 5261 . + 0 ID=cds-WP_000656438.1;Parent=gene-AB25_RS03805;Dbxref=GenBank:WP_000656438.1;Name=WP_000656438.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312927.1;locus_tag=AB25_RS03805;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WP_000656438.1;transl_table=11 NZ_JJMC01000072.1 RefSeq gene 5290 6240 . - . ID=gene-AB25_RS03800;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=AB25_RS03800;old_locus_tag=AB25_4556 NZ_JJMC01000072.1 Protein Homology CDS 5290 6240 . - 0 ID=cds-WP_000023081.1;Parent=gene-AB25_RS03800;Dbxref=GenBank:WP_000023081.1;Name=WP_000023081.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418405.1;locus_tag=AB25_RS03800;product=type I pantothenate kinase;protein_id=WP_000023081.1;transl_table=11 ##sequence-region NZ_JJMC01000073.1 1 841 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000073.1 RefSeq region 1 841 . + . ID=NZ_JJMC01000073.1:1..841;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000073.1 RefSeq gene 56 131 . + . ID=gene-AB25_RS03795;Name=AB25_RS03795;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS03795;old_locus_tag=AB25_4557 NZ_JJMC01000073.1 tRNAscan-SE tRNA 56 131 . + . ID=rna-AB25_RS03795;Parent=gene-AB25_RS03795;anticodon=(pos:89..91);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS03795;product=tRNA-Thr NZ_JJMC01000073.1 tRNAscan-SE exon 56 131 . + . ID=exon-AB25_RS03795-1;Parent=rna-AB25_RS03795;anticodon=(pos:89..91);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS03795;product=tRNA-Thr NZ_JJMC01000073.1 RefSeq gene 246 841 . + . ID=gene-AB25_RS03790;Name=AB25_RS03790;end_range=841,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS03790;old_locus_tag=AB25_4558;partial=true NZ_JJMC01000073.1 Protein Homology CDS 246 841 . + 0 ID=cds-WP_000031754.1;Parent=gene-AB25_RS03790;Dbxref=GenBank:WP_000031754.1;Name=WP_000031754.1;Ontology_term=GO:0003924,GO:0005525;end_range=841,.;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=AB25_RS03790;partial=true;product=GTP-binding protein;protein_id=WP_000031754.1;transl_table=11 ##sequence-region NZ_JJMC01000074.1 1 31659 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000074.1 RefSeq region 1 31659 . + . ID=NZ_JJMC01000074.1:1..31659;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000074.1 RefSeq pseudogene 1 357 . + . ID=gene-AB25_RS03785;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=pseudogene;locus_tag=AB25_RS03785;old_locus_tag=AB25_4559;partial=true;pseudo=true;start_range=.,1 NZ_JJMC01000074.1 Protein Homology CDS 1 357 . + 0 ID=cds-AB25_RS03785;Parent=gene-AB25_RS03785;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312930.1;locus_tag=AB25_RS03785;partial=true;product=elongation factor Tu;pseudo=true;start_range=.,1;transl_table=11 NZ_JJMC01000074.1 RefSeq gene 587 970 . + . ID=gene-AB25_RS03780;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=AB25_RS03780;old_locus_tag=AB25_4560 NZ_JJMC01000074.1 Protein Homology CDS 587 970 . + 0 ID=cds-WP_001275702.1;Parent=gene-AB25_RS03780;Dbxref=GenBank:WP_001275702.1;Name=WP_001275702.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1;locus_tag=AB25_RS03780;product=preprotein translocase subunit SecE;protein_id=WP_001275702.1;transl_table=11 NZ_JJMC01000074.1 RefSeq gene 972 1517 . + . ID=gene-AB25_RS03775;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=AB25_RS03775;old_locus_tag=AB25_4561 NZ_JJMC01000074.1 Protein Homology CDS 972 1517 . + 0 ID=cds-WP_001287516.1;Parent=gene-AB25_RS03775;Dbxref=GenBank:WP_001287516.1;Name=WP_001287516.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280494.1;locus_tag=AB25_RS03775;product=transcription termination/antitermination protein NusG;protein_id=WP_001287516.1;transl_table=11 NZ_JJMC01000074.1 RefSeq gene 1676 2104 . + . ID=gene-AB25_RS03770;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=AB25_RS03770;old_locus_tag=AB25_4562 NZ_JJMC01000074.1 Protein Homology CDS 1676 2104 . + 0 ID=cds-WP_001085926.1;Parent=gene-AB25_RS03770;Dbxref=GenBank:WP_001085926.1;Name=WP_001085926.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1;locus_tag=AB25_RS03770;product=50S ribosomal protein L11;protein_id=WP_001085926.1;transl_table=11 NZ_JJMC01000074.1 RefSeq gene 2108 2812 . + . ID=gene-AB25_RS03765;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=AB25_RS03765;old_locus_tag=AB25_4563 NZ_JJMC01000074.1 Protein Homology CDS 2108 2812 . + 0 ID=cds-WP_001096684.1;Parent=gene-AB25_RS03765;Dbxref=GenBank:WP_001096684.1;Name=WP_001096684.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312934.1;locus_tag=AB25_RS03765;product=50S ribosomal protein L1;protein_id=WP_001096684.1;transl_table=11 NZ_JJMC01000074.1 RefSeq gene 3225 3722 . + . ID=gene-AB25_RS03760;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=AB25_RS03760;old_locus_tag=AB25_4564 NZ_JJMC01000074.1 Protein Homology CDS 3225 3722 . + 0 ID=cds-WP_001207201.1;Parent=gene-AB25_RS03760;Dbxref=GenBank:WP_001207201.1;Name=WP_001207201.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=AB25_RS03760;product=50S ribosomal protein L10;protein_id=WP_001207201.1;transl_table=11 NZ_JJMC01000074.1 RefSeq gene 3789 4154 . + . ID=gene-AB25_RS03755;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=AB25_RS03755;old_locus_tag=AB25_4565 NZ_JJMC01000074.1 Protein Homology CDS 3789 4154 . + 0 ID=cds-WP_000028878.1;Parent=gene-AB25_RS03755;Dbxref=GenBank:WP_000028878.1;Name=WP_000028878.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1;locus_tag=AB25_RS03755;product=50S ribosomal protein L7/L12;protein_id=WP_000028878.1;transl_table=11 NZ_JJMC01000074.1 RefSeq gene 4474 8502 . + . ID=gene-AB25_RS03750;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=AB25_RS03750;old_locus_tag=AB25_4566 NZ_JJMC01000074.1 Protein Homology CDS 4474 8502 . + 0 ID=cds-WP_000263098.1;Parent=gene-AB25_RS03750;Dbxref=GenBank:WP_000263098.1;Name=WP_000263098.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1;locus_tag=AB25_RS03750;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_000263098.1;transl_table=11 NZ_JJMC01000074.1 RefSeq gene 8579 12802 . + . ID=gene-AB25_RS03745;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=AB25_RS03745;old_locus_tag=AB25_4567 NZ_JJMC01000074.1 Protein Homology CDS 8579 12802 . + 0 ID=cds-WP_000653944.1;Parent=gene-AB25_RS03745;Dbxref=GenBank:WP_000653944.1;Name=WP_000653944.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312938.1;locus_tag=AB25_RS03745;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_000653944.1;transl_table=11 NZ_JJMC01000074.1 RefSeq gene 13015 13554 . + . ID=gene-AB25_RS03740;Name=yjaZ;gbkey=Gene;gene=yjaZ;gene_biotype=protein_coding;locus_tag=AB25_RS03740;old_locus_tag=AB25_4568 NZ_JJMC01000074.1 Protein Homology CDS 13015 13554 . + 0 ID=cds-WP_001307500.1;Parent=gene-AB25_RS03740;Dbxref=GenBank:WP_001307500.1;Name=WP_001307500.1;gbkey=CDS;gene=yjaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418416.1;locus_tag=AB25_RS03740;product=heat-shock protein C;protein_id=WP_001307500.1;transl_table=11 NZ_JJMC01000074.1 RefSeq gene 13964 15097 . - . ID=gene-AB25_RS03735;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=AB25_RS03735;old_locus_tag=AB25_4569 NZ_JJMC01000074.1 Protein Homology CDS 13964 15097 . - 0 ID=cds-WP_000847461.1;Parent=gene-AB25_RS03735;Dbxref=GenBank:WP_000847461.1;Name=WP_000847461.1;Ontology_term=GO:0009228,GO:0005506,GO:0016829,GO:0051539,GO:1904047;gbkey=CDS;gene=thiH;go_function=iron ion binding|0005506||IEA,lyase activity|0016829||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418417.1;locus_tag=AB25_RS03735;product=2-iminoacetate synthase ThiH;protein_id=WP_000847461.1;transl_table=11 NZ_JJMC01000074.1 RefSeq gene 15094 15864 . - . ID=gene-AB25_RS03730;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=AB25_RS03730;old_locus_tag=AB25_4570 NZ_JJMC01000074.1 Protein Homology CDS 15094 15864 . - 0 ID=cds-WP_000944093.1;Parent=gene-AB25_RS03730;Dbxref=GenBank:WP_000944093.1;Name=WP_000944093.1;gbkey=CDS;gene=thiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418418.2;locus_tag=AB25_RS03730;product=thiazole synthase;protein_id=WP_000944093.1;transl_table=11 NZ_JJMC01000074.1 RefSeq gene 15866 16066 . - . ID=gene-AB25_RS03725;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=AB25_RS03725;old_locus_tag=AB25_4571 NZ_JJMC01000074.1 Protein Homology CDS 15866 16066 . - 0 ID=cds-WP_001166230.1;Parent=gene-AB25_RS03725;Dbxref=GenBank:WP_001166230.1;Name=WP_001166230.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026279.1;locus_tag=AB25_RS03725;product=sulfur carrier protein ThiS;protein_id=WP_001166230.1;transl_table=11 NZ_JJMC01000074.1 RefSeq gene 16050 16805 . - . ID=gene-AB25_RS03720;Name=thiF;gbkey=Gene;gene=thiF;gene_biotype=protein_coding;locus_tag=AB25_RS03720;old_locus_tag=AB25_4572 NZ_JJMC01000074.1 Protein Homology CDS 16050 16805 . - 0 ID=cds-WP_000999737.1;Parent=gene-AB25_RS03720;Dbxref=GenBank:WP_000999737.1;Name=WP_000999737.1;Ontology_term=GO:0009228,GO:0016779;gbkey=CDS;gene=thiF;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418420.4;locus_tag=AB25_RS03720;product=thiazole biosynthesis adenylyltransferase ThiF;protein_id=WP_000999737.1;transl_table=11 NZ_JJMC01000074.1 RefSeq gene 16798 17433 . - . ID=gene-AB25_RS03715;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=AB25_RS03715;old_locus_tag=AB25_4573 NZ_JJMC01000074.1 Protein Homology CDS 16798 17433 . - 0 ID=cds-WP_000284600.1;Parent=gene-AB25_RS03715;Dbxref=GenBank:WP_000284600.1;Name=WP_000284600.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709787.2;locus_tag=AB25_RS03715;product=thiamine phosphate synthase;protein_id=WP_000284600.1;transl_table=11 NZ_JJMC01000074.1 RefSeq gene 17433 19328 . - . ID=gene-AB25_RS03710;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=AB25_RS03710;old_locus_tag=AB25_4574 NZ_JJMC01000074.1 Protein Homology CDS 17433 19328 . - 0 ID=cds-WP_001276926.1;Parent=gene-AB25_RS03710;Dbxref=GenBank:WP_001276926.1;Name=WP_001276926.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418422.1;locus_tag=AB25_RS03710;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_001276926.1;transl_table=11 NZ_JJMC01000074.1 cmsearch riboswitch 19409 19509 . - . ID=id-NZ_JJMC01000074.1:19409..19509;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JJMC01000074.1 RefSeq gene 19561 20037 . - . ID=gene-AB25_RS03705;Name=rsd;gbkey=Gene;gene=rsd;gene_biotype=protein_coding;locus_tag=AB25_RS03705;old_locus_tag=AB25_4575 NZ_JJMC01000074.1 Protein Homology CDS 19561 20037 . - 0 ID=cds-WP_000934302.1;Parent=gene-AB25_RS03705;Dbxref=GenBank:WP_000934302.1;Name=WP_000934302.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rsd;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312945.1;locus_tag=AB25_RS03705;product=sigma D regulator;protein_id=WP_000934302.1;transl_table=11 NZ_JJMC01000074.1 RefSeq gene 20132 20905 . + . ID=gene-AB25_RS03700;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=AB25_RS03700;old_locus_tag=AB25_4576 NZ_JJMC01000074.1 Protein Homology CDS 20132 20905 . + 0 ID=cds-WP_000373940.1;Parent=gene-AB25_RS03700;Dbxref=GenBank:WP_000373940.1;Name=WP_000373940.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026280.1;locus_tag=AB25_RS03700;product=NAD(+) diphosphatase;protein_id=WP_000373940.1;transl_table=11 NZ_JJMC01000074.1 RefSeq gene 20945 22009 . + . ID=gene-AB25_RS03695;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=AB25_RS03695;old_locus_tag=AB25_4577 NZ_JJMC01000074.1 Protein Homology CDS 20945 22009 . + 0 ID=cds-WP_032171310.1;Parent=gene-AB25_RS03695;Dbxref=GenBank:WP_032171310.1;Name=WP_032171310.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418425.1;locus_tag=AB25_RS03695;product=uroporphyrinogen decarboxylase;protein_id=WP_032171310.1;transl_table=11 NZ_JJMC01000074.1 RefSeq gene 22019 22690 . + . ID=gene-AB25_RS03690;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=AB25_RS03690;old_locus_tag=AB25_4578 NZ_JJMC01000074.1 Protein Homology CDS 22019 22690 . + 0 ID=cds-WP_000362388.1;Parent=gene-AB25_RS03690;Dbxref=GenBank:WP_000362388.1;Name=WP_000362388.1;Note=cleaves DNA at apurinic or apyrimidinic sites;Ontology_term=GO:0006281,GO:0004519;gbkey=CDS;gene=nfi;go_function=endonuclease activity|0004519||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312948.1;locus_tag=AB25_RS03690;product=deoxyribonuclease V;protein_id=WP_000362388.1;transl_table=11 NZ_JJMC01000074.1 RefSeq gene 22733 23323 . + . ID=gene-AB25_RS03685;Name=yjaG;gbkey=Gene;gene=yjaG;gene_biotype=protein_coding;locus_tag=AB25_RS03685;old_locus_tag=AB25_4579 NZ_JJMC01000074.1 Protein Homology CDS 22733 23323 . + 0 ID=cds-WP_000940106.1;Parent=gene-AB25_RS03685;Dbxref=GenBank:WP_000940106.1;Name=WP_000940106.1;gbkey=CDS;gene=yjaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418427.1;locus_tag=AB25_RS03685;product=YjaG family protein;protein_id=WP_000940106.1;transl_table=11 NZ_JJMC01000074.1 RefSeq gene 23510 23782 . + . ID=gene-AB25_RS03680;Name=hupA;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;locus_tag=AB25_RS03680;old_locus_tag=AB25_4580 NZ_JJMC01000074.1 Protein Homology CDS 23510 23782 . + 0 ID=cds-WP_001044513.1;Parent=gene-AB25_RS03680;Dbxref=GenBank:WP_001044513.1;Name=WP_001044513.1;gbkey=CDS;gene=hupA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1;locus_tag=AB25_RS03680;product=nucleoid-associated protein HU-alpha;protein_id=WP_001044513.1;transl_table=11 NZ_JJMC01000074.1 RefSeq gene 23795 24490 . + . ID=gene-AB25_RS03675;Name=yjaH;gbkey=Gene;gene=yjaH;gene_biotype=protein_coding;locus_tag=AB25_RS03675;old_locus_tag=AB25_4581 NZ_JJMC01000074.1 Protein Homology CDS 23795 24490 . + 0 ID=cds-WP_001300651.1;Parent=gene-AB25_RS03675;Dbxref=GenBank:WP_001300651.1;Name=WP_001300651.1;gbkey=CDS;gene=yjaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709795.2;locus_tag=AB25_RS03675;product=DUF1481 domain-containing protein;protein_id=WP_001300651.1;transl_table=11 NZ_JJMC01000074.1 RefSeq gene 24492 24917 . - . ID=gene-AB25_RS03670;Name=zraP;gbkey=Gene;gene=zraP;gene_biotype=protein_coding;locus_tag=AB25_RS03670;old_locus_tag=AB25_4582 NZ_JJMC01000074.1 Protein Homology CDS 24492 24917 . - 0 ID=cds-WP_000828222.1;Parent=gene-AB25_RS03670;Dbxref=GenBank:WP_000828222.1;Name=WP_000828222.1;gbkey=CDS;gene=zraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312952.2;locus_tag=AB25_RS03670;product=zinc resistance sensor/chaperone ZraP;protein_id=WP_000828222.1;transl_table=11 NZ_JJMC01000074.1 RefSeq gene 25155 26531 . + . ID=gene-AB25_RS03665;Name=zraS;gbkey=Gene;gene=zraS;gene_biotype=protein_coding;locus_tag=AB25_RS03665;old_locus_tag=AB25_4584 NZ_JJMC01000074.1 Protein Homology CDS 25155 26531 . + 0 ID=cds-WP_001211921.1;Parent=gene-AB25_RS03665;Dbxref=GenBank:WP_001211921.1;Name=WP_001211921.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=zraS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709797.1;locus_tag=AB25_RS03665;product=two-component system sensor histidine kinase ZraS;protein_id=WP_001211921.1;transl_table=11 NZ_JJMC01000074.1 RefSeq gene 26528 27853 . + . ID=gene-AB25_RS03660;Name=zraR;gbkey=Gene;gene=zraR;gene_biotype=protein_coding;locus_tag=AB25_RS03660;old_locus_tag=AB25_4585 NZ_JJMC01000074.1 Protein Homology CDS 26528 27853 . + 0 ID=cds-WP_032171306.1;Parent=gene-AB25_RS03660;Dbxref=GenBank:WP_032171306.1;Name=WP_032171306.1;Ontology_term=GO:0000160,GO:0006355,GO:0043565;gbkey=CDS;gene=zraR;go_function=sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418432.1;locus_tag=AB25_RS03660;product=sigma-54-dependent response regulator transcription factor ZraR;protein_id=WP_032171306.1;transl_table=11 NZ_JJMC01000074.1 RefSeq gene 27850 29139 . - . ID=gene-AB25_RS03655;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=AB25_RS03655;old_locus_tag=AB25_4586 NZ_JJMC01000074.1 Protein Homology CDS 27850 29139 . - 0 ID=cds-WP_000866807.1;Parent=gene-AB25_RS03655;Dbxref=GenBank:WP_000866807.1;Name=WP_000866807.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418433.1;locus_tag=AB25_RS03655;product=phosphoribosylamine--glycine ligase;protein_id=WP_000866807.1;transl_table=11 NZ_JJMC01000074.1 RefSeq gene 29151 30740 . - . ID=gene-AB25_RS03650;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=AB25_RS03650;old_locus_tag=AB25_4587 NZ_JJMC01000074.1 Protein Homology CDS 29151 30740 . - 0 ID=cds-WP_001187566.1;Parent=gene-AB25_RS03650;Dbxref=GenBank:WP_001187566.1;Name=WP_001187566.1;Ontology_term=GO:0009152,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=AB25_RS03650;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_001187566.1;transl_table=11 NZ_JJMC01000074.1 RefSeq gene 31355 31659 . + . ID=gene-AB25_RS0126495;Name=AB25_RS0126495;end_range=31659,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB25_RS0126495;partial=true NZ_JJMC01000074.1 cmsearch rRNA 31355 31659 . + . ID=rna-AB25_RS0126495;Parent=gene-AB25_RS0126495;Dbxref=RFAM:RF00177;end_range=31659,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS0126495;partial=true;product=16S ribosomal RNA NZ_JJMC01000074.1 cmsearch exon 31355 31659 . + . ID=exon-AB25_RS0126495-1;Parent=rna-AB25_RS0126495;Dbxref=RFAM:RF00177;end_range=31659,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS0126495;partial=true;product=16S ribosomal RNA ##sequence-region NZ_JJMC01000075.1 1 5703 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000075.1 RefSeq region 1 5703 . + . ID=NZ_JJMC01000075.1:1..5703;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000075.1 RefSeq gene 1 105 . + . ID=gene-AB25_RS03645;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AB25_RS03645;old_locus_tag=AB25_4589;partial=true;start_range=.,1 NZ_JJMC01000075.1 cmsearch rRNA 1 105 . + . ID=rna-AB25_RS03645;Parent=gene-AB25_RS03645;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS03645;partial=true;product=5S ribosomal RNA;start_range=.,1 NZ_JJMC01000075.1 cmsearch exon 1 105 . + . ID=exon-AB25_RS03645-1;Parent=rna-AB25_RS03645;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS03645;partial=true;product=5S ribosomal RNA;start_range=.,1 NZ_JJMC01000075.1 RefSeq gene 260 375 . + . ID=gene-AB25_RS03635;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AB25_RS03635;old_locus_tag=AB25_4591 NZ_JJMC01000075.1 cmsearch rRNA 260 375 . + . ID=rna-AB25_RS03635;Parent=gene-AB25_RS03635;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS03635;product=5S ribosomal RNA NZ_JJMC01000075.1 cmsearch exon 260 375 . + . ID=exon-AB25_RS03635-1;Parent=rna-AB25_RS03635;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS03635;product=5S ribosomal RNA NZ_JJMC01000075.1 RefSeq gene 452 835 . + . ID=gene-AB25_RS03630;Name=AB25_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS03630;old_locus_tag=AB25_4592 NZ_JJMC01000075.1 Protein Homology CDS 452 835 . + 0 ID=cds-WP_001347268.1;Parent=gene-AB25_RS03630;Dbxref=GenBank:WP_001347268.1;Name=WP_001347268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418435.1;locus_tag=AB25_RS03630;product=YjaA family stress response protein;protein_id=WP_001347268.1;transl_table=11 NZ_JJMC01000075.1 RefSeq gene 898 1341 . - . ID=gene-AB25_RS03625;Name=AB25_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS03625;old_locus_tag=AB25_4593 NZ_JJMC01000075.1 Protein Homology CDS 898 1341 . - 0 ID=cds-WP_000237008.1;Parent=gene-AB25_RS03625;Dbxref=GenBank:WP_000237008.1;Name=WP_000237008.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418436.1;locus_tag=AB25_RS03625;product=acetyltransferase;protein_id=WP_000237008.1;transl_table=11 NZ_JJMC01000075.1 RefSeq gene 1498 2427 . + . ID=gene-AB25_RS03620;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=AB25_RS03620;old_locus_tag=AB25_4594 NZ_JJMC01000075.1 Protein Homology CDS 1498 2427 . + 0 ID=cds-WP_001122789.1;Parent=gene-AB25_RS03620;Dbxref=GenBank:WP_001122789.1;Name=WP_001122789.1;Ontology_term=GO:0019281,GO:0008899,GO:0005737;gbkey=CDS;gene=metA;go_component=cytoplasm|0005737||IEA;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine|0019281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132837.1;locus_tag=AB25_RS03620;product=homoserine O-acetyltransferase MetA;protein_id=WP_001122789.1;transl_table=11 NZ_JJMC01000075.1 RefSeq gene 2696 4297 . + . ID=gene-AB25_RS03615;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=AB25_RS03615;old_locus_tag=AB25_4595 NZ_JJMC01000075.1 Protein Homology CDS 2696 4297 . + 0 ID=cds-WP_001392947.1;Parent=gene-AB25_RS03615;Dbxref=GenBank:WP_001392947.1;Name=WP_001392947.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;gene=aceB;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312959.1;locus_tag=AB25_RS03615;product=malate synthase A;protein_id=WP_001392947.1;transl_table=11 NZ_JJMC01000075.1 RefSeq gene 4327 5631 . + . ID=gene-AB25_RS03610;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=AB25_RS03610;old_locus_tag=AB25_4596 NZ_JJMC01000075.1 Protein Homology CDS 4327 5631 . + 0 ID=cds-WP_000857856.1;Parent=gene-AB25_RS03610;Dbxref=GenBank:WP_000857856.1;Name=WP_000857856.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418439.1;locus_tag=AB25_RS03610;product=isocitrate lyase;protein_id=WP_000857856.1;transl_table=11 ##sequence-region NZ_JJMC01000076.1 1 2419 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000076.1 RefSeq region 1 2419 . + . ID=NZ_JJMC01000076.1:1..2419;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000076.1 RefSeq pseudogene 1 434 . + . ID=gene-AB25_RS03605;Name=AB25_RS03605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS03605;old_locus_tag=AB25_4597;partial=true;pseudo=true;start_range=.,1 NZ_JJMC01000076.1 Protein Homology CDS 1 434 . + 2 ID=cds-AB25_RS03605;Parent=gene-AB25_RS03605;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418439.1;locus_tag=AB25_RS03605;partial=true;product=isocitrate lyase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJMC01000076.1 RefSeq gene 1009 2419 . + . ID=gene-AB25_RS03600;Name=aceK;end_range=2419,.;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=AB25_RS03600;old_locus_tag=AB25_4598;partial=true NZ_JJMC01000076.1 Protein Homology CDS 1009 2419 . + 0 ID=cds-WP_032206771.1;Parent=gene-AB25_RS03600;Dbxref=GenBank:WP_032206771.1;Name=WP_032206771.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;end_range=2419,.;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418440.1;locus_tag=AB25_RS03600;partial=true;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WP_032206771.1;transl_table=11 ##sequence-region NZ_JJMC01000077.1 1 104287 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000077.1 RefSeq region 1 104287 . + . ID=NZ_JJMC01000077.1:1..104287;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000077.1 RefSeq gene 1 1619 . + . ID=gene-AB25_RS03595;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=AB25_RS03595;old_locus_tag=AB25_4599;partial=true;start_range=.,1 NZ_JJMC01000077.1 Protein Homology CDS 1 1619 . + 2 ID=cds-WP_032296156.1;Parent=gene-AB25_RS03595;Dbxref=GenBank:WP_032296156.1;Name=WP_032296156.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418440.1;locus_tag=AB25_RS03595;partial=true;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WP_032296156.1;start_range=.,1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 1588 3162 . - . ID=gene-AB25_RS03590;Name=AB25_RS03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS03590;old_locus_tag=AB25_4600 NZ_JJMC01000077.1 Protein Homology CDS 1588 3162 . - 0 ID=cds-WP_001392940.1;Parent=gene-AB25_RS03590;Dbxref=GenBank:WP_001392940.1;Name=WP_001392940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418441.1;locus_tag=AB25_RS03590;product=ShET2/EspL2 family type III secretion system effector toxin;protein_id=WP_001392940.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 3479 4303 . - . ID=gene-AB25_RS03585;Name=iclR;gbkey=Gene;gene=iclR;gene_biotype=protein_coding;locus_tag=AB25_RS03585;old_locus_tag=AB25_4601 NZ_JJMC01000077.1 Protein Homology CDS 3479 4303 . - 0 ID=cds-WP_001385054.1;Parent=gene-AB25_RS03585;Dbxref=GenBank:WP_001385054.1;Name=WP_001385054.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=iclR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418442.2;locus_tag=AB25_RS03585;product=glyoxylate bypass operon transcriptional repressor IclR;protein_id=WP_001385054.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 4503 8186 . + . ID=gene-AB25_RS03580;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=AB25_RS03580;old_locus_tag=AB25_4602 NZ_JJMC01000077.1 Protein Homology CDS 4503 8186 . + 0 ID=cds-WP_000096053.1;Parent=gene-AB25_RS03580;Dbxref=GenBank:WP_000096053.1;Name=WP_000096053.1;Ontology_term=GO:0009086,GO:0008270,GO:0008705,GO:0031419;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA,cobalamin binding|0031419||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312964.1;locus_tag=AB25_RS03580;product=methionine synthase;protein_id=WP_000096053.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 8406 10037 . + . ID=gene-AB25_RS03575;Name=yjbB;gbkey=Gene;gene=yjbB;gene_biotype=protein_coding;locus_tag=AB25_RS03575;old_locus_tag=AB25_4603 NZ_JJMC01000077.1 Protein Homology CDS 8406 10037 . + 0 ID=cds-WP_000956830.1;Parent=gene-AB25_RS03575;Dbxref=GenBank:WP_000956830.1;Name=WP_000956830.1;Ontology_term=GO:0044341,GO:0005436,GO:0005886;gbkey=CDS;gene=yjbB;go_component=plasma membrane|0005886||IEA;go_function=sodium:phosphate symporter activity|0005436||IEA;go_process=sodium-dependent phosphate transport|0044341||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418444.1;locus_tag=AB25_RS03575;product=Na/Pi cotransporter family protein;protein_id=WP_000956830.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 10128 10817 . - . ID=gene-AB25_RS03570;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=AB25_RS03570;old_locus_tag=AB25_4604 NZ_JJMC01000077.1 Protein Homology CDS 10128 10817 . - 0 ID=cds-WP_000421763.1;Parent=gene-AB25_RS03570;Dbxref=GenBank:WP_000421763.1;Name=WP_000421763.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=pepE;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312966.1;locus_tag=AB25_RS03570;product=dipeptidase PepE;protein_id=WP_000421763.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 11200 12429 . - . ID=gene-AB25_RS03565;Name=sorE;gbkey=Gene;gene=sorE;gene_biotype=protein_coding;locus_tag=AB25_RS03565;old_locus_tag=AB25_4606 NZ_JJMC01000077.1 Protein Homology CDS 11200 12429 . - 0 ID=cds-WP_000858545.1;Parent=gene-AB25_RS03565;Dbxref=GenBank:WP_000858545.1;Name=WP_000858545.1;gbkey=CDS;gene=sorE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312968.1;locus_tag=AB25_RS03565;product=L-sorbose 1-phosphate reductase;protein_id=WP_000858545.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 12481 13305 . - . ID=gene-AB25_RS03560;Name=AB25_RS03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS03560;old_locus_tag=AB25_4607 NZ_JJMC01000077.1 Protein Homology CDS 12481 13305 . - 0 ID=cds-WP_000437902.1;Parent=gene-AB25_RS03560;Dbxref=GenBank:WP_000437902.1;Name=WP_000437902.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224537.1;locus_tag=AB25_RS03560;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_000437902.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 13316 14113 . - . ID=gene-AB25_RS03555;Name=AB25_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS03555;old_locus_tag=AB25_4608 NZ_JJMC01000077.1 Protein Homology CDS 13316 14113 . - 0 ID=cds-WP_000406320.1;Parent=gene-AB25_RS03555;Dbxref=GenBank:WP_000406320.1;Name=WP_000406320.1;Ontology_term=GO:0009401,GO:0034219,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224538.1;locus_tag=AB25_RS03555;product=PTS mannose/fructose/sorbose transporter subunit IIC;protein_id=WP_000406320.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 14179 14673 . - . ID=gene-AB25_RS03550;Name=AB25_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS03550;old_locus_tag=AB25_4609 NZ_JJMC01000077.1 Protein Homology CDS 14179 14673 . - 0 ID=cds-WP_032296157.1;Parent=gene-AB25_RS03550;Dbxref=GenBank:WP_032296157.1;Name=WP_032296157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709809.1;locus_tag=AB25_RS03550;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=WP_032296157.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 14673 15080 . - . ID=gene-AB25_RS03545;Name=AB25_RS03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS03545;old_locus_tag=AB25_4610 NZ_JJMC01000077.1 Protein Homology CDS 14673 15080 . - 0 ID=cds-WP_000245645.1;Parent=gene-AB25_RS03545;Dbxref=GenBank:WP_000245645.1;Name=WP_000245645.1;Ontology_term=GO:0008643,GO:0016773,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313029.1;locus_tag=AB25_RS03545;product=mannose/fructose/sorbose PTS transporter subunit IIA;protein_id=WP_000245645.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 15090 15896 . - . ID=gene-AB25_RS03540;Name=AB25_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS03540;old_locus_tag=AB25_4611 NZ_JJMC01000077.1 Protein Homology CDS 15090 15896 . - 0 ID=cds-WP_001195424.1;Parent=gene-AB25_RS03540;Dbxref=GenBank:WP_001195424.1;Name=WP_001195424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313030.1;locus_tag=AB25_RS03540;product=SDR family oxidoreductase;protein_id=WP_001195424.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 15966 16913 . - . ID=gene-AB25_RS03535;Name=AB25_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS03535;old_locus_tag=AB25_4612 NZ_JJMC01000077.1 Protein Homology CDS 15966 16913 . - 0 ID=cds-WP_001341740.1;Parent=gene-AB25_RS03535;Dbxref=GenBank:WP_001341740.1;Name=WP_001341740.1;Ontology_term=GO:0006355,GO:0003677,GO:0030246;gbkey=CDS;go_function=DNA binding|0003677||IEA,carbohydrate binding|0030246||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709812.2;locus_tag=AB25_RS03535;product=sugar-binding transcriptional regulator;protein_id=WP_001341740.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 17261 18133 . + . ID=gene-AB25_RS03530;Name=rluF;gbkey=Gene;gene=rluF;gene_biotype=protein_coding;locus_tag=AB25_RS03530;old_locus_tag=AB25_4613 NZ_JJMC01000077.1 Protein Homology CDS 17261 18133 . + 0 ID=cds-WP_000936350.1;Parent=gene-AB25_RS03530;Dbxref=GenBank:WP_000936350.1;Name=WP_000936350.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluF;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709813.1;locus_tag=AB25_RS03530;product=23S rRNA pseudouridine(2604) synthase RluF;protein_id=WP_000936350.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 18134 18406 . - . ID=gene-AB25_RS03525;Name=yjbD;gbkey=Gene;gene=yjbD;gene_biotype=protein_coding;locus_tag=AB25_RS03525;old_locus_tag=AB25_4614 NZ_JJMC01000077.1 Protein Homology CDS 18134 18406 . - 0 ID=cds-WP_001207638.1;Parent=gene-AB25_RS03525;Dbxref=GenBank:WP_001207638.1;Name=WP_001207638.1;gbkey=CDS;gene=yjbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313033.1;locus_tag=AB25_RS03525;product=DUF3811 domain-containing protein;protein_id=WP_001207638.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 18936 20063 . + . ID=gene-AB25_RS03520;Name=AB25_RS03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS03520;old_locus_tag=AB25_4615 NZ_JJMC01000077.1 Protein Homology CDS 18936 20063 . + 0 ID=cds-WP_000592033.1;Parent=gene-AB25_RS03520;Dbxref=GenBank:WP_000592033.1;Name=WP_000592033.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000592028.1;locus_tag=AB25_RS03520;product=slipin family protein;protein_id=WP_000592033.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 20069 20860 . + . ID=gene-AB25_RS03515;Name=AB25_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS03515;old_locus_tag=AB25_4616 NZ_JJMC01000077.1 Protein Homology CDS 20069 20860 . + 0 ID=cds-WP_001130533.1;Parent=gene-AB25_RS03515;Dbxref=GenBank:WP_001130533.1;Name=WP_001130533.1;Ontology_term=GO:0000166,GO:0016779,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleotidyltransferase activity|0016779||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001130549.1;locus_tag=AB25_RS03515;product=nucleotidyltransferase domain-containing protein;protein_id=WP_001130533.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 20896 21822 . - . ID=gene-AB25_RS03510;Name=AB25_RS03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS03510;old_locus_tag=AB25_4617 NZ_JJMC01000077.1 Protein Homology CDS 20896 21822 . - 0 ID=cds-WP_000212687.1;Parent=gene-AB25_RS03510;Dbxref=GenBank:WP_000212687.1;Name=WP_000212687.1;Ontology_term=GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666873.1;locus_tag=AB25_RS03510;product=zeta toxin family protein;protein_id=WP_000212687.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 21967 23316 . - . ID=gene-AB25_RS03505;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=AB25_RS03505;old_locus_tag=AB25_4618 NZ_JJMC01000077.1 Protein Homology CDS 21967 23316 . - 0 ID=cds-WP_032171557.1;Parent=gene-AB25_RS03505;Dbxref=GenBank:WP_032171557.1;Name=WP_032171557.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;gene=lysC;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313034.1;locus_tag=AB25_RS03505;product=lysine-sensitive aspartokinase 3;protein_id=WP_032171557.1;transl_table=11 NZ_JJMC01000077.1 cmsearch riboswitch 23408 23604 . - . ID=id-NZ_JJMC01000077.1:23408..23604;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JJMC01000077.1 RefSeq gene 23841 25490 . + . ID=gene-AB25_RS03500;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=AB25_RS03500;old_locus_tag=AB25_4619 NZ_JJMC01000077.1 Protein Homology CDS 23841 25490 . + 0 ID=cds-WP_000789985.1;Parent=gene-AB25_RS03500;Dbxref=GenBank:WP_000789985.1;Name=WP_000789985.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001681912.1;locus_tag=AB25_RS03500;product=glucose-6-phosphate isomerase;protein_id=WP_000789985.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 25845 26087 . + . ID=gene-AB25_RS03495;Name=yjbE;gbkey=Gene;gene=yjbE;gene_biotype=protein_coding;locus_tag=AB25_RS03495;old_locus_tag=AB25_4620 NZ_JJMC01000077.1 Protein Homology CDS 25845 26087 . + 0 ID=cds-WP_000757333.1;Parent=gene-AB25_RS03495;Dbxref=GenBank:WP_000757333.1;Name=WP_000757333.1;gbkey=CDS;gene=yjbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313036.1;locus_tag=AB25_RS03495;product=exopolysaccharide production protein YjbE;protein_id=WP_000757333.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 26201 26839 . + . ID=gene-AB25_RS03490;Name=yjbF;gbkey=Gene;gene=yjbF;gene_biotype=protein_coding;locus_tag=AB25_RS03490;old_locus_tag=AB25_4621 NZ_JJMC01000077.1 Protein Homology CDS 26201 26839 . + 0 ID=cds-WP_032171560.1;Parent=gene-AB25_RS03490;Dbxref=GenBank:WP_032171560.1;Name=WP_032171560.1;gbkey=CDS;gene=yjbF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418451.4;locus_tag=AB25_RS03490;product=YjbF family lipoprotein;protein_id=WP_032171560.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 26836 27573 . + . ID=gene-AB25_RS03485;Name=yjbG;gbkey=Gene;gene=yjbG;gene_biotype=protein_coding;locus_tag=AB25_RS03485;old_locus_tag=AB25_4622 NZ_JJMC01000077.1 Protein Homology CDS 26836 27573 . + 0 ID=cds-WP_000595534.1;Parent=gene-AB25_RS03485;Dbxref=GenBank:WP_000595534.1;Name=WP_000595534.1;gbkey=CDS;gene=yjbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418452.1;locus_tag=AB25_RS03485;product=capsule biosynthesis GfcC family protein;protein_id=WP_000595534.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 27573 29669 . + . ID=gene-AB25_RS03480;Name=yjbH;gbkey=Gene;gene=yjbH;gene_biotype=protein_coding;locus_tag=AB25_RS03480;old_locus_tag=AB25_4623 NZ_JJMC01000077.1 Protein Homology CDS 27573 29669 . + 0 ID=cds-WP_000745767.1;Parent=gene-AB25_RS03480;Dbxref=GenBank:WP_000745767.1;Name=WP_000745767.1;gbkey=CDS;gene=yjbH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418453.1;locus_tag=AB25_RS03480;product=YjbH domain-containing protein;protein_id=WP_000745767.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 29716 29994 . - . ID=gene-AB25_RS30675;Name=AB25_RS30675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS30675 NZ_JJMC01000077.1 Protein Homology CDS 29716 29994 . - 0 ID=cds-WP_001295279.1;Parent=gene-AB25_RS30675;Dbxref=GenBank:WP_001295279.1;Name=WP_001295279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165332.1;locus_tag=AB25_RS30675;product=periplasmic protein;protein_id=WP_001295279.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 29995 30138 . + . ID=gene-AB25_RS31820;Name=AB25_RS31820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31820;old_locus_tag=AB25_4625 NZ_JJMC01000077.1 GeneMarkS-2+ CDS 29995 30138 . + 0 ID=cds-WP_000487767.1;Parent=gene-AB25_RS31820;Dbxref=GenBank:WP_000487767.1;Name=WP_000487767.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB25_RS31820;product=hypothetical protein;protein_id=WP_000487767.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 30264 30674 . + . ID=gene-AB25_RS03470;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=AB25_RS03470;old_locus_tag=AB25_4626 NZ_JJMC01000077.1 Protein Homology CDS 30264 30674 . + 0 ID=cds-WP_000202902.1;Parent=gene-AB25_RS03470;Dbxref=GenBank:WP_000202902.1;Name=WP_000202902.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418454.1;locus_tag=AB25_RS03470;product=phosphate-starvation-inducible protein PsiE;protein_id=WP_000202902.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 30718 32193 . - . ID=gene-AB25_RS03465;Name=xylE;gbkey=Gene;gene=xylE;gene_biotype=protein_coding;locus_tag=AB25_RS03465;old_locus_tag=AB25_4627 NZ_JJMC01000077.1 Protein Homology CDS 30718 32193 . - 0 ID=cds-WP_001097291.1;Parent=gene-AB25_RS03465;Dbxref=GenBank:WP_001097291.1;Name=WP_001097291.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=xylE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313041.1;locus_tag=AB25_RS03465;product=D-xylose transporter XylE;protein_id=WP_001097291.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 32565 33455 . - . ID=gene-AB25_RS03460;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=AB25_RS03460;old_locus_tag=AB25_4628 NZ_JJMC01000077.1 Protein Homology CDS 32565 33455 . - 0 ID=cds-WP_001252058.1;Parent=gene-AB25_RS03460;Dbxref=GenBank:WP_001252058.1;Name=WP_001252058.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=malG;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001252048.1;locus_tag=AB25_RS03460;product=maltose ABC transporter permease MalG;protein_id=WP_001252058.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 33470 35014 . - . ID=gene-AB25_RS03455;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=AB25_RS03455;old_locus_tag=AB25_4629 NZ_JJMC01000077.1 Protein Homology CDS 33470 35014 . - 0 ID=cds-WP_001297290.1;Parent=gene-AB25_RS03455;Dbxref=GenBank:WP_001297290.1;Name=WP_001297290.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=malF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418457.1;locus_tag=AB25_RS03455;product=maltose ABC transporter permease MalF;protein_id=WP_001297290.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 35168 36358 . - . ID=gene-AB25_RS03450;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=AB25_RS03450;old_locus_tag=AB25_4630 NZ_JJMC01000077.1 Protein Homology CDS 35168 36358 . - 0 ID=cds-WP_000695387.1;Parent=gene-AB25_RS03450;Dbxref=GenBank:WP_000695387.1;Name=WP_000695387.1;Ontology_term=GO:0008643,GO:0055085,GO:0015144;gbkey=CDS;gene=malE;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000695396.1;locus_tag=AB25_RS03450;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;protein_id=WP_000695387.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 36723 37838 . + . ID=gene-AB25_RS03445;Name=malK;gbkey=Gene;gene=malK;gene_biotype=protein_coding;locus_tag=AB25_RS03445;old_locus_tag=AB25_4631 NZ_JJMC01000077.1 Protein Homology CDS 36723 37838 . + 0 ID=cds-WP_000179165.1;Parent=gene-AB25_RS03445;Dbxref=GenBank:WP_000179165.1;Name=WP_000179165.1;Ontology_term=GO:0008643,GO:0055085,GO:0005524,GO:0140359,GO:0043190;gbkey=CDS;gene=malK;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011915502.1;locus_tag=AB25_RS03445;product=maltose/maltodextrin ABC transporter ATP-binding protein MalK;protein_id=WP_000179165.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 37910 39250 . + . ID=gene-AB25_RS03440;Name=lamB;gbkey=Gene;gene=lamB;gene_biotype=protein_coding;locus_tag=AB25_RS03440;old_locus_tag=AB25_4632 NZ_JJMC01000077.1 Protein Homology CDS 37910 39250 . + 0 ID=cds-WP_000973658.1;Parent=gene-AB25_RS03440;Dbxref=GenBank:WP_000973658.1;Name=WP_000973658.1;gbkey=CDS;gene=lamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313046.1;locus_tag=AB25_RS03440;product=maltoporin LamB;protein_id=WP_000973658.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 39493 40413 . + . ID=gene-AB25_RS03435;Name=malM;gbkey=Gene;gene=malM;gene_biotype=protein_coding;locus_tag=AB25_RS03435;old_locus_tag=AB25_4633 NZ_JJMC01000077.1 Protein Homology CDS 39493 40413 . + 0 ID=cds-WP_000783444.1;Parent=gene-AB25_RS03435;Dbxref=GenBank:WP_000783444.1;Name=WP_000783444.1;Ontology_term=GO:0008643,GO:0042597;gbkey=CDS;gene=malM;go_component=periplasmic space|0042597||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313047.1;locus_tag=AB25_RS03435;product=maltose operon protein MalM;protein_id=WP_000783444.1;transl_table=11 NZ_JJMC01000077.1 RefSeq pseudogene 40642 42222 . + . ID=gene-AB25_RS03430;Name=AB25_RS03430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS03430;old_locus_tag=AB25_4636;pseudo=true NZ_JJMC01000077.1 Protein Homology CDS 40642 42222 . + 0 ID=cds-AB25_RS03430;Parent=gene-AB25_RS03430;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579104.1;locus_tag=AB25_RS03430;product=SopA family protein;pseudo=true;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 42445 42942 . + . ID=gene-AB25_RS03425;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=AB25_RS03425;old_locus_tag=AB25_4637 NZ_JJMC01000077.1 Protein Homology CDS 42445 42942 . + 0 ID=cds-WP_001297295.1;Parent=gene-AB25_RS03425;Dbxref=GenBank:WP_001297295.1;Name=WP_001297295.1;Ontology_term=GO:0008813;gbkey=CDS;gene=ubiC;go_function=chorismate lyase activity|0008813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709881.2;locus_tag=AB25_RS03425;product=chorismate lyase;protein_id=WP_001297295.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 42955 43827 . + . ID=gene-AB25_RS03420;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=AB25_RS03420;old_locus_tag=AB25_4638 NZ_JJMC01000077.1 Protein Homology CDS 42955 43827 . + 0 ID=cds-WP_000455228.1;Parent=gene-AB25_RS03420;Dbxref=GenBank:WP_000455228.1;Name=WP_000455228.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate polyprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313050.1;locus_tag=AB25_RS03420;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_000455228.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 43982 46405 . - . ID=gene-AB25_RS03415;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=AB25_RS03415;old_locus_tag=AB25_4639 NZ_JJMC01000077.1 Protein Homology CDS 43982 46405 . - 0 ID=cds-WP_000017354.1;Parent=gene-AB25_RS03415;Dbxref=GenBank:WP_000017354.1;Name=WP_000017354.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418465.4;locus_tag=AB25_RS03415;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WP_000017354.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 46576 46944 . + . ID=gene-AB25_RS03410;Name=dgkA;gbkey=Gene;gene=dgkA;gene_biotype=protein_coding;locus_tag=AB25_RS03410;old_locus_tag=AB25_4640 NZ_JJMC01000077.1 Protein Homology CDS 46576 46944 . + 0 ID=cds-WP_000002907.1;Parent=gene-AB25_RS03410;Dbxref=GenBank:WP_000002907.1;Name=WP_000002907.1;gbkey=CDS;gene=dgkA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313052.1;locus_tag=AB25_RS03410;product=diacylglycerol kinase;protein_id=WP_000002907.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 47054 47662 . + . ID=gene-AB25_RS03405;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=AB25_RS03405;old_locus_tag=AB25_4641 NZ_JJMC01000077.1 Protein Homology CDS 47054 47662 . + 0 ID=cds-WP_000646078.1;Parent=gene-AB25_RS03405;Dbxref=GenBank:WP_000646078.1;Name=WP_000646078.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646075.1;locus_tag=AB25_RS03405;product=transcriptional repressor LexA;protein_id=WP_000646078.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 47735 49060 . + . ID=gene-AB25_RS03400;Name=dinF;gbkey=Gene;gene=dinF;gene_biotype=protein_coding;locus_tag=AB25_RS03400;old_locus_tag=AB25_4642 NZ_JJMC01000077.1 Protein Homology CDS 47735 49060 . + 0 ID=cds-WP_001301116.1;Parent=gene-AB25_RS03400;Dbxref=GenBank:WP_001301116.1;Name=WP_001301116.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;gene=dinF;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313054.4;locus_tag=AB25_RS03400;product=MATE family efflux transporter DinF;protein_id=WP_001301116.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 49176 49385 . + . ID=gene-AB25_RS03395;Name=yjbJ;gbkey=Gene;gene=yjbJ;gene_biotype=protein_coding;locus_tag=AB25_RS03395;old_locus_tag=AB25_4643 NZ_JJMC01000077.1 Protein Homology CDS 49176 49385 . + 0 ID=cds-WP_001030593.1;Parent=gene-AB25_RS03395;Dbxref=GenBank:WP_001030593.1;Name=WP_001030593.1;gbkey=CDS;gene=yjbJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313055.1;locus_tag=AB25_RS03395;product=CsbD family protein;protein_id=WP_001030593.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 49427 49942 . - . ID=gene-AB25_RS03390;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=AB25_RS03390;old_locus_tag=AB25_4644 NZ_JJMC01000077.1 Protein Homology CDS 49427 49942 . - 0 ID=cds-WP_001295691.1;Parent=gene-AB25_RS03390;Dbxref=GenBank:WP_001295691.1;Name=WP_001295691.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=zur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418470.4;locus_tag=AB25_RS03390;product=zinc uptake transcriptional repressor Zur;protein_id=WP_001295691.1;transl_table=11 NZ_JJMC01000077.1 RefSeq pseudogene 50260 51275 . + . ID=gene-AB25_RS03380;Name=AB25_RS03380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS03380;old_locus_tag=AB25_4646;pseudo=true NZ_JJMC01000077.1 Protein Homology CDS 50260 51275 . + 0 ID=cds-AB25_RS03380;Parent=gene-AB25_RS03380;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_105478490.1;locus_tag=AB25_RS03380;product=DUF2713 family protein;pseudo=true;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 51638 52675 . + . ID=gene-AB25_RS03375;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=AB25_RS03375;old_locus_tag=AB25_4648 NZ_JJMC01000077.1 Protein Homology CDS 51638 52675 . + 0 ID=cds-WP_001298868.1;Parent=gene-AB25_RS03375;Dbxref=GenBank:WP_001298868.1;Name=WP_001298868.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313058.1;locus_tag=AB25_RS03375;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_001298868.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 52809 53051 . + . ID=gene-AB25_RS03370;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=AB25_RS03370;old_locus_tag=AB25_4649 NZ_JJMC01000077.1 Protein Homology CDS 52809 53051 . + 0 ID=cds-WP_000891389.1;Parent=gene-AB25_RS03370;Dbxref=GenBank:WP_000891389.1;Name=WP_000891389.1;gbkey=CDS;gene=pspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313059.2;locus_tag=AB25_RS03370;product=envelope stress response protein PspG;protein_id=WP_000891389.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 53217 54200 . - . ID=gene-AB25_RS03365;Name=qorA;gbkey=Gene;gene=qorA;gene_biotype=protein_coding;locus_tag=AB25_RS03365;old_locus_tag=AB25_4650 NZ_JJMC01000077.1 Protein Homology CDS 53217 54200 . - 0 ID=cds-WP_032171563.1;Parent=gene-AB25_RS03365;Dbxref=GenBank:WP_032171563.1;Name=WP_032171563.1;gbkey=CDS;gene=qorA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313060.1;locus_tag=AB25_RS03365;product=quinone oxidoreductase;protein_id=WP_032171563.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 54283 55698 . + . ID=gene-AB25_RS03360;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=AB25_RS03360;old_locus_tag=AB25_4651 NZ_JJMC01000077.1 Protein Homology CDS 54283 55698 . + 0 ID=cds-WP_000918363.1;Parent=gene-AB25_RS03360;Dbxref=GenBank:WP_000918363.1;Name=WP_000918363.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418476.1;locus_tag=AB25_RS03360;product=replicative DNA helicase;protein_id=WP_000918363.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 55751 56830 . + . ID=gene-AB25_RS03355;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=AB25_RS03355;old_locus_tag=AB25_4652 NZ_JJMC01000077.1 Protein Homology CDS 55751 56830 . + 0 ID=cds-WP_001147328.1;Parent=gene-AB25_RS03355;Dbxref=GenBank:WP_001147328.1;Name=WP_001147328.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418477.1;locus_tag=AB25_RS03355;product=alanine racemase;protein_id=WP_001147328.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 57083 58276 . + . ID=gene-AB25_RS03350;Name=tyrB;gbkey=Gene;gene=tyrB;gene_biotype=protein_coding;locus_tag=AB25_RS03350;old_locus_tag=AB25_4654 NZ_JJMC01000077.1 Protein Homology CDS 57083 58276 . + 0 ID=cds-WP_000486996.1;Parent=gene-AB25_RS03350;Dbxref=GenBank:WP_000486996.1;Name=WP_000486996.1;gbkey=CDS;gene=tyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418478.1;locus_tag=AB25_RS03350;product=aromatic amino acid transaminase;protein_id=WP_000486996.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 58498 58749 . - . ID=gene-AB25_RS32550;Name=AB25_RS32550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32550 NZ_JJMC01000077.1 GeneMarkS-2+ CDS 58498 58749 . - 0 ID=cds-WP_000275035.1;Parent=gene-AB25_RS32550;Dbxref=GenBank:WP_000275035.1;Name=WP_000275035.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB25_RS32550;product=hypothetical protein;protein_id=WP_000275035.1;transl_table=11 NZ_JJMC01000077.1 RefSeq pseudogene 58779 59001 . - . ID=gene-AB25_RS32555;Name=AB25_RS32555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32555;pseudo=true NZ_JJMC01000077.1 Protein Homology CDS 58779 59001 . - 0 ID=cds-AB25_RS32555;Parent=gene-AB25_RS32555;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165333.1;locus_tag=AB25_RS32555;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 59403 60116 . + . ID=gene-AB25_RS03340;Name=aphA;gbkey=Gene;gene=aphA;gene_biotype=protein_coding;locus_tag=AB25_RS03340;old_locus_tag=AB25_4656 NZ_JJMC01000077.1 Protein Homology CDS 59403 60116 . + 0 ID=cds-WP_032221483.1;Parent=gene-AB25_RS03340;Dbxref=GenBank:WP_032221483.1;Name=WP_032221483.1;Ontology_term=GO:0003993,GO:0030288;gbkey=CDS;gene=aphA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=acid phosphatase activity|0003993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418479.1;locus_tag=AB25_RS03340;product=acid phosphatase AphA;protein_id=WP_032221483.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 60227 60643 . + . ID=gene-AB25_RS03335;Name=yjbQ;gbkey=Gene;gene=yjbQ;gene_biotype=protein_coding;locus_tag=AB25_RS03335;old_locus_tag=AB25_4657 NZ_JJMC01000077.1 Protein Homology CDS 60227 60643 . + 0 ID=cds-WP_000270372.1;Parent=gene-AB25_RS03335;Dbxref=GenBank:WP_000270372.1;Name=WP_000270372.1;Ontology_term=GO:0003824,GO:0005737;gbkey=CDS;gene=yjbQ;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313065.1;locus_tag=AB25_RS03335;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WP_000270372.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 60647 61003 . + . ID=gene-AB25_RS03330;Name=yjbR;gbkey=Gene;gene=yjbR;gene_biotype=protein_coding;locus_tag=AB25_RS03330;old_locus_tag=AB25_4658 NZ_JJMC01000077.1 Protein Homology CDS 60647 61003 . + 0 ID=cds-WP_000155657.1;Parent=gene-AB25_RS03330;Dbxref=GenBank:WP_000155657.1;Name=WP_000155657.1;Ontology_term=GO:0003677;gbkey=CDS;gene=yjbR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313066.1;locus_tag=AB25_RS03330;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000155657.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 61038 63860 . - . ID=gene-AB25_RS03325;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=AB25_RS03325;old_locus_tag=AB25_4659 NZ_JJMC01000077.1 Protein Homology CDS 61038 63860 . - 0 ID=cds-WP_022581618.1;Parent=gene-AB25_RS03325;Dbxref=GenBank:WP_022581618.1;Name=WP_022581618.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418482.1;locus_tag=AB25_RS03325;product=excinuclease ABC subunit UvrA;protein_id=WP_022581618.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 64114 64650 . + . ID=gene-AB25_RS03320;Name=ssb1;gbkey=Gene;gene=ssb1;gene_biotype=protein_coding;locus_tag=AB25_RS03320;old_locus_tag=AB25_4660 NZ_JJMC01000077.1 Protein Homology CDS 64114 64650 . + 0 ID=cds-WP_000168305.1;Parent=gene-AB25_RS03320;Dbxref=GenBank:WP_000168305.1;Name=WP_000168305.1;gbkey=CDS;gene=ssb1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313068.1;locus_tag=AB25_RS03320;product=single-stranded DNA-binding protein SSB1;protein_id=WP_000168305.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 64749 65030 . - . ID=gene-AB25_RS03315;Name=yjcB;gbkey=Gene;gene=yjcB;gene_biotype=protein_coding;locus_tag=AB25_RS03315;old_locus_tag=AB25_4661 NZ_JJMC01000077.1 Protein Homology CDS 64749 65030 . - 0 ID=cds-WP_001295689.1;Parent=gene-AB25_RS03315;Dbxref=GenBank:WP_001295689.1;Name=WP_001295689.1;gbkey=CDS;gene=yjcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313069.2;locus_tag=AB25_RS03315;product=YjcB family protein;protein_id=WP_001295689.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 65460 67046 . + . ID=gene-AB25_RS03310;Name=pdeC;gbkey=Gene;gene=pdeC;gene_biotype=protein_coding;locus_tag=AB25_RS03310;old_locus_tag=AB25_4662 NZ_JJMC01000077.1 Protein Homology CDS 65460 67046 . + 0 ID=cds-WP_000019524.1;Parent=gene-AB25_RS03310;Dbxref=GenBank:WP_000019524.1;Name=WP_000019524.1;gbkey=CDS;gene=pdeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418485.1;locus_tag=AB25_RS03310;product=c-di-GMP phosphodiesterase PdeC;protein_id=WP_000019524.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 67049 67372 . - . ID=gene-AB25_RS03305;Name=soxS;gbkey=Gene;gene=soxS;gene_biotype=protein_coding;locus_tag=AB25_RS03305;old_locus_tag=AB25_4663 NZ_JJMC01000077.1 Protein Homology CDS 67049 67372 . - 0 ID=cds-WP_000019358.1;Parent=gene-AB25_RS03305;Dbxref=GenBank:WP_000019358.1;Name=WP_000019358.1;gbkey=CDS;gene=soxS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313071.1;locus_tag=AB25_RS03305;product=superoxide response transcriptional regulator SoxS;protein_id=WP_000019358.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 67458 67922 . + . ID=gene-AB25_RS03300;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;locus_tag=AB25_RS03300;old_locus_tag=AB25_4664 NZ_JJMC01000077.1 Protein Homology CDS 67458 67922 . + 0 ID=cds-WP_000412428.1;Parent=gene-AB25_RS03300;Dbxref=GenBank:WP_000412428.1;Name=WP_000412428.1;Ontology_term=GO:0006355,GO:0006979,GO:0003700,GO:0051537;gbkey=CDS;gene=soxR;go_function=DNA-binding transcription factor activity|0003700||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313072.1;locus_tag=AB25_RS03300;product=redox-sensitive transcriptional activator SoxR;protein_id=WP_000412428.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 68468 69817 . + . ID=gene-AB25_RS03295;Name=ghxP;gbkey=Gene;gene=ghxP;gene_biotype=protein_coding;gene_synonym=yjcD;locus_tag=AB25_RS03295;old_locus_tag=AB25_4666 NZ_JJMC01000077.1 Protein Homology CDS 68468 69817 . + 0 ID=cds-WP_000106882.1;Parent=gene-AB25_RS03295;Dbxref=GenBank:WP_000106882.1;Name=WP_000106882.1;gbkey=CDS;gene=ghxP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132609.1;locus_tag=AB25_RS03295;product=guanine/hypoxanthine transporter GhxP;protein_id=WP_000106882.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 69968 71617 . + . ID=gene-AB25_RS03290;Name=yjcE;gbkey=Gene;gene=yjcE;gene_biotype=protein_coding;locus_tag=AB25_RS03290;old_locus_tag=AB25_4668 NZ_JJMC01000077.1 Protein Homology CDS 69968 71617 . + 0 ID=cds-WP_000402207.1;Parent=gene-AB25_RS03290;Dbxref=GenBank:WP_000402207.1;Name=WP_000402207.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385,GO:0016020;gbkey=CDS;gene=yjcE;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313074.1;locus_tag=AB25_RS03290;product=Na+/H+ antiporter;protein_id=WP_000402207.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 71771 73063 . - . ID=gene-AB25_RS03285;Name=yjcF;gbkey=Gene;gene=yjcF;gene_biotype=protein_coding;locus_tag=AB25_RS03285;old_locus_tag=AB25_4669 NZ_JJMC01000077.1 Protein Homology CDS 71771 73063 . - 0 ID=cds-WP_001270133.1;Parent=gene-AB25_RS03285;Dbxref=GenBank:WP_001270133.1;Name=WP_001270133.1;gbkey=CDS;gene=yjcF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709843.1;locus_tag=AB25_RS03285;product=pentapeptide repeat-containing protein;protein_id=WP_001270133.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 73241 74890 . - . ID=gene-AB25_RS03280;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=AB25_RS03280;old_locus_tag=AB25_4670 NZ_JJMC01000077.1 Protein Homology CDS 73241 74890 . - 0 ID=cds-WP_000832572.1;Parent=gene-AB25_RS03280;Dbxref=GenBank:WP_000832572.1;Name=WP_000832572.1;Ontology_term=GO:0006814,GO:0015123,GO:0015370,GO:0031402,GO:0005886;gbkey=CDS;gene=actP;go_component=plasma membrane|0005886||IEA;go_function=acetate transmembrane transporter activity|0015123||IEA,solute:sodium symporter activity|0015370||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418491.1;locus_tag=AB25_RS03280;product=cation/acetate symporter ActP;protein_id=WP_000832572.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 74887 75201 . - . ID=gene-AB25_RS03275;Name=yjcH;gbkey=Gene;gene=yjcH;gene_biotype=protein_coding;locus_tag=AB25_RS03275;old_locus_tag=AB25_4671 NZ_JJMC01000077.1 Protein Homology CDS 74887 75201 . - 0 ID=cds-WP_001014565.1;Parent=gene-AB25_RS03275;Dbxref=GenBank:WP_001014565.1;Name=WP_001014565.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yjcH;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418492.1;locus_tag=AB25_RS03275;product=DUF485 domain-containing protein;protein_id=WP_001014565.1;transl_table=11 NZ_JJMC01000077.1 RefSeq pseudogene 75402 77360 . - . ID=gene-AB25_RS0126525;Name=acs;gbkey=Gene;gene=acs;gene_biotype=pseudogene;locus_tag=AB25_RS0126525;old_locus_tag=AB25_4673;pseudo=true NZ_JJMC01000077.1 Protein Homology CDS 75402 77360 . - 0 ID=cds-AB25_RS0126525;Parent=gene-AB25_RS0126525;Note=internal stop;Ontology_term=GO:0019427,GO:0003987,GO:0016208;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA,AMP binding|0016208||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418493.1;locus_tag=AB25_RS0126525;product=acetate--CoA ligase;pseudo=true;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 77752 79188 . + . ID=gene-AB25_RS03270;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;locus_tag=AB25_RS03270;old_locus_tag=AB25_4674 NZ_JJMC01000077.1 Protein Homology CDS 77752 79188 . + 0 ID=cds-WP_000196875.1;Parent=gene-AB25_RS03270;Dbxref=GenBank:WP_000196875.1;Name=WP_000196875.1;Ontology_term=GO:0008152,GO:0005509,GO:0020037,GO:0042279,GO:0042597;gbkey=CDS;gene=nrfA;go_component=periplasmic space|0042597||IEA;go_function=calcium ion binding|0005509||IEA,heme binding|0020037||IEA,nitrite reductase (cytochrome%2C ammonia-forming) activity|0042279||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313079.1;locus_tag=AB25_RS03270;product=ammonia-forming nitrite reductase cytochrome c552 subunit;protein_id=WP_000196875.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 79233 79799 . + . ID=gene-AB25_RS03265;Name=nrfB;gbkey=Gene;gene=nrfB;gene_biotype=protein_coding;locus_tag=AB25_RS03265;old_locus_tag=AB25_4675 NZ_JJMC01000077.1 Protein Homology CDS 79233 79799 . + 0 ID=cds-WP_001295391.1;Parent=gene-AB25_RS03265;Dbxref=GenBank:WP_001295391.1;Name=WP_001295391.1;Ontology_term=GO:0008152,GO:0042597;gbkey=CDS;gene=nrfB;go_component=periplasmic space|0042597||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418495.2;locus_tag=AB25_RS03265;product=cytochrome c nitrite reductase pentaheme subunit;protein_id=WP_001295391.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 79796 80467 . + . ID=gene-AB25_RS03260;Name=nrfC;gbkey=Gene;gene=nrfC;gene_biotype=protein_coding;locus_tag=AB25_RS03260;old_locus_tag=AB25_4676 NZ_JJMC01000077.1 Protein Homology CDS 79796 80467 . + 0 ID=cds-WP_000220281.1;Parent=gene-AB25_RS03260;Dbxref=GenBank:WP_000220281.1;Name=WP_000220281.1;gbkey=CDS;gene=nrfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313081.1;locus_tag=AB25_RS03260;product=cytochrome c nitrite reductase Fe-S protein;protein_id=WP_000220281.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 80464 81420 . + . ID=gene-AB25_RS03255;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=AB25_RS03255;old_locus_tag=AB25_4677 NZ_JJMC01000077.1 Protein Homology CDS 80464 81420 . + 0 ID=cds-WP_000195173.1;Parent=gene-AB25_RS03255;Dbxref=GenBank:WP_000195173.1;Name=WP_000195173.1;gbkey=CDS;gene=nrfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418497.1;locus_tag=AB25_RS03255;product=cytochrome c nitrite reductase subunit NrfD;protein_id=WP_000195173.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 81440 83158 . + . ID=gene-AB25_RS03250;Name=nrfE;gbkey=Gene;gene=nrfE;gene_biotype=protein_coding;locus_tag=AB25_RS03250;old_locus_tag=AB25_4678 NZ_JJMC01000077.1 Protein Homology CDS 81440 83158 . + 0 ID=cds-WP_071999015.1;Parent=gene-AB25_RS03250;Dbxref=GenBank:WP_071999015.1;Name=WP_071999015.1;gbkey=CDS;gene=nrfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014640253.1;locus_tag=AB25_RS03250;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_071999015.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 83151 83534 . + . ID=gene-AB25_RS03245;Name=nrfF;gbkey=Gene;gene=nrfF;gene_biotype=protein_coding;locus_tag=AB25_RS03245;old_locus_tag=AB25_4679 NZ_JJMC01000077.1 Protein Homology CDS 83151 83534 . + 0 ID=cds-WP_001032546.1;Parent=gene-AB25_RS03245;Dbxref=GenBank:WP_001032546.1;Name=WP_001032546.1;gbkey=CDS;gene=nrfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418499.1;locus_tag=AB25_RS03245;product=heme lyase NrfEFG subunit NrfF;protein_id=WP_001032546.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 83531 84127 . + . ID=gene-AB25_RS03240;Name=nrfG;gbkey=Gene;gene=nrfG;gene_biotype=protein_coding;locus_tag=AB25_RS03240;old_locus_tag=AB25_4680 NZ_JJMC01000077.1 Protein Homology CDS 83531 84127 . + 0 ID=cds-WP_000812889.1;Parent=gene-AB25_RS03240;Dbxref=GenBank:WP_000812889.1;Name=WP_000812889.1;gbkey=CDS;gene=nrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709852.1;locus_tag=AB25_RS03240;product=heme lyase NrfEFG subunit NrfG;protein_id=WP_000812889.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 84469 85782 . + . ID=gene-AB25_RS03235;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;locus_tag=AB25_RS03235;old_locus_tag=AB25_4682 NZ_JJMC01000077.1 Protein Homology CDS 84469 85782 . + 0 ID=cds-WP_000835799.1;Parent=gene-AB25_RS03235;Dbxref=GenBank:WP_000835799.1;Name=WP_000835799.1;Ontology_term=GO:0006835,GO:0015293,GO:0016020;gbkey=CDS;gene=gltP;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313086.1;locus_tag=AB25_RS03235;product=glutamate/aspartate:proton symporter GltP;protein_id=WP_000835799.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 85860 86549 . - . ID=gene-AB25_RS03230;Name=yjcO;gbkey=Gene;gene=yjcO;gene_biotype=protein_coding;locus_tag=AB25_RS03230;old_locus_tag=AB25_4683 NZ_JJMC01000077.1 Protein Homology CDS 85860 86549 . - 0 ID=cds-WP_000719886.1;Parent=gene-AB25_RS03230;Dbxref=GenBank:WP_000719886.1;Name=WP_000719886.1;gbkey=CDS;gene=yjcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313087.1;locus_tag=AB25_RS03230;product=Sel1 family TPR-like repeat protein YjcO;protein_id=WP_000719886.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 86643 88790 . - . ID=gene-AB25_RS03225;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=AB25_RS03225;old_locus_tag=AB25_4684 NZ_JJMC01000077.1 Protein Homology CDS 86643 88790 . - 0 ID=cds-WP_001300547.1;Parent=gene-AB25_RS03225;Dbxref=GenBank:WP_001300547.1;Name=WP_001300547.1;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418503.1;locus_tag=AB25_RS03225;product=formate dehydrogenase subunit alpha;protein_id=WP_001300547.1;transl_except=(pos:complement(88371..88373)%2Caa:Sec);transl_table=11 NZ_JJMC01000077.1 RefSeq gene 88988 90454 . - . ID=gene-AB25_RS03215;Name=mdtP;gbkey=Gene;gene=mdtP;gene_biotype=protein_coding;locus_tag=AB25_RS03215;old_locus_tag=AB25_4687 NZ_JJMC01000077.1 Protein Homology CDS 88988 90454 . - 0 ID=cds-WP_000610574.1;Parent=gene-AB25_RS03215;Dbxref=GenBank:WP_000610574.1;Name=WP_000610574.1;gbkey=CDS;gene=mdtP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709855.1;locus_tag=AB25_RS03215;product=multidrug efflux transporter outer membrane subunit MdtP;protein_id=WP_000610574.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 90451 92502 . - . ID=gene-AB25_RS03210;Name=mdtO;gbkey=Gene;gene=mdtO;gene_biotype=protein_coding;locus_tag=AB25_RS03210;old_locus_tag=AB25_4688 NZ_JJMC01000077.1 Protein Homology CDS 90451 92502 . - 0 ID=cds-WP_001275144.1;Parent=gene-AB25_RS03210;Dbxref=GenBank:WP_001275144.1;Name=WP_001275144.1;gbkey=CDS;gene=mdtO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418505.2;locus_tag=AB25_RS03210;product=multidrug efflux transporter permease subunit MdtO;protein_id=WP_001275144.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 92502 93533 . - . ID=gene-AB25_RS03205;Name=mdtN;gbkey=Gene;gene=mdtN;gene_biotype=protein_coding;locus_tag=AB25_RS03205;old_locus_tag=AB25_4689 NZ_JJMC01000077.1 Protein Homology CDS 92502 93533 . - 0 ID=cds-WP_000446354.1;Parent=gene-AB25_RS03205;Dbxref=GenBank:WP_000446354.1;Name=WP_000446354.1;gbkey=CDS;gene=mdtN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418506.1;locus_tag=AB25_RS03205;product=multidrug efflux transporter periplasmic adaptor subunit MdtN;protein_id=WP_000446354.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 93552 93827 . - . ID=gene-AB25_RS03200;Name=ytcA;gbkey=Gene;gene=ytcA;gene_biotype=protein_coding;locus_tag=AB25_RS03200;old_locus_tag=AB25_4690 NZ_JJMC01000077.1 Protein Homology CDS 93552 93827 . - 0 ID=cds-WP_001297587.1;Parent=gene-AB25_RS03200;Dbxref=GenBank:WP_001297587.1;Name=WP_001297587.1;gbkey=CDS;gene=ytcA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165334.1;locus_tag=AB25_RS03200;product=YtcA family lipoprotein;protein_id=WP_001297587.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 94036 96021 . - . ID=gene-AB25_RS03195;Name=yjcS;gbkey=Gene;gene=yjcS;gene_biotype=protein_coding;locus_tag=AB25_RS03195;old_locus_tag=AB25_4691 NZ_JJMC01000077.1 Protein Homology CDS 94036 96021 . - 0 ID=cds-WP_001307516.1;Parent=gene-AB25_RS03195;Dbxref=GenBank:WP_001307516.1;Name=WP_001307516.1;gbkey=CDS;gene=yjcS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418507.2;locus_tag=AB25_RS03195;product=alkyl sulfatase YjcS;protein_id=WP_001307516.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 96294 97223 . - . ID=gene-AB25_RS03190;Name=alsK;gbkey=Gene;gene=alsK;gene_biotype=protein_coding;locus_tag=AB25_RS03190;old_locus_tag=AB25_4692 NZ_JJMC01000077.1 Protein Homology CDS 96294 97223 . - 0 ID=cds-WP_001171692.1;Parent=gene-AB25_RS03190;Dbxref=GenBank:WP_001171692.1;Name=WP_001171692.1;Ontology_term=GO:0019316,GO:0019200;gbkey=CDS;gene=alsK;go_function=carbohydrate kinase activity|0019200||IEA;go_process=D-allose catabolic process|0019316||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418508.1;locus_tag=AB25_RS03190;product=allose kinase;protein_id=WP_001171692.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 97207 97902 . - . ID=gene-AB25_RS03185;Name=alsE;gbkey=Gene;gene=alsE;gene_biotype=protein_coding;locus_tag=AB25_RS03185;old_locus_tag=AB25_4693 NZ_JJMC01000077.1 Protein Homology CDS 97207 97902 . - 0 ID=cds-WP_001311314.1;Parent=gene-AB25_RS03185;Dbxref=GenBank:WP_001311314.1;Name=WP_001311314.1;gbkey=CDS;gene=alsE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418509.1;locus_tag=AB25_RS03185;product=D-allulose-6-phosphate 3-epimerase;protein_id=WP_001311314.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 97913 98893 . - . ID=gene-AB25_RS03180;Name=alsC;gbkey=Gene;gene=alsC;gene_biotype=protein_coding;locus_tag=AB25_RS03180;old_locus_tag=AB25_4694 NZ_JJMC01000077.1 Protein Homology CDS 97913 98893 . - 0 ID=cds-WP_000507106.1;Parent=gene-AB25_RS03180;Dbxref=GenBank:WP_000507106.1;Name=WP_000507106.1;gbkey=CDS;gene=alsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418510.1;locus_tag=AB25_RS03180;product=D-allose ABC transporter permease;protein_id=WP_000507106.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 98872 100404 . - . ID=gene-AB25_RS03175;Name=alsA;gbkey=Gene;gene=alsA;gene_biotype=protein_coding;locus_tag=AB25_RS03175;old_locus_tag=AB25_4695 NZ_JJMC01000077.1 Protein Homology CDS 98872 100404 . - 0 ID=cds-WP_000235260.1;Parent=gene-AB25_RS03175;Dbxref=GenBank:WP_000235260.1;Name=WP_000235260.1;gbkey=CDS;gene=alsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418511.1;locus_tag=AB25_RS03175;product=D-allose ABC transporter ATP-binding protein AlsA;protein_id=WP_000235260.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 100531 101466 . - . ID=gene-AB25_RS03170;Name=alsB;gbkey=Gene;gene=alsB;gene_biotype=protein_coding;locus_tag=AB25_RS03170;old_locus_tag=AB25_4696 NZ_JJMC01000077.1 Protein Homology CDS 100531 101466 . - 0 ID=cds-WP_001046194.1;Parent=gene-AB25_RS03170;Dbxref=GenBank:WP_001046194.1;Name=WP_001046194.1;gbkey=CDS;gene=alsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418512.1;locus_tag=AB25_RS03170;product=D-allose transporter substrate-binding protein;protein_id=WP_001046194.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 101525 102415 . - . ID=gene-AB25_RS03165;Name=alsR;gbkey=Gene;gene=alsR;gene_biotype=protein_coding;locus_tag=AB25_RS03165;old_locus_tag=AB25_4697 NZ_JJMC01000077.1 Protein Homology CDS 101525 102415 . - 0 ID=cds-WP_000083216.1;Parent=gene-AB25_RS03165;Dbxref=GenBank:WP_000083216.1;Name=WP_000083216.1;gbkey=CDS;gene=alsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418513.4;locus_tag=AB25_RS03165;product=MurR/RpiR family transcriptional regulator;protein_id=WP_000083216.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 102775 103224 . + . ID=gene-AB25_RS03160;Name=rpiB;gbkey=Gene;gene=rpiB;gene_biotype=protein_coding;gene_synonym=alsI;locus_tag=AB25_RS03160;old_locus_tag=AB25_4699 NZ_JJMC01000077.1 Protein Homology CDS 102775 103224 . + 0 ID=cds-WP_000716794.1;Parent=gene-AB25_RS03160;Dbxref=GenBank:WP_000716794.1;Name=WP_000716794.1;gbkey=CDS;gene=rpiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418514.1;locus_tag=AB25_RS03160;product=bifunctional allose-6-phosphate isomerase/ribose-5-phosphate isomerase RpiB;protein_id=WP_000716794.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 103293 103622 . + . ID=gene-AB25_RS03155;Name=yjdP;gbkey=Gene;gene=yjdP;gene_biotype=protein_coding;locus_tag=AB25_RS03155;old_locus_tag=AB25_4700 NZ_JJMC01000077.1 Protein Homology CDS 103293 103622 . + 0 ID=cds-WP_000819746.1;Parent=gene-AB25_RS03155;Dbxref=GenBank:WP_000819746.1;Name=WP_000819746.1;gbkey=CDS;gene=yjdP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026281.1;locus_tag=AB25_RS03155;product=DDRRRQL repeat protein YjdP;protein_id=WP_000819746.1;transl_table=11 NZ_JJMC01000077.1 RefSeq gene 103769 104287 . - . ID=gene-AB25_RS03150;Name=phnP;end_range=104287,.;gbkey=Gene;gene=phnP;gene_biotype=protein_coding;locus_tag=AB25_RS03150;old_locus_tag=AB25_4701;partial=true NZ_JJMC01000077.1 Protein Homology CDS 103769 104287 . - 0 ID=cds-WP_032296158.1;Parent=gene-AB25_RS03150;Dbxref=GenBank:WP_032296158.1;Name=WP_032296158.1;Ontology_term=GO:0019700,GO:0008081;end_range=104287,.;gbkey=CDS;gene=phnP;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418516.1;locus_tag=AB25_RS03150;partial=true;product=phosphonate metabolism protein PhnP;protein_id=WP_032296158.1;transl_table=11 ##sequence-region NZ_JJMC01000078.1 1 77047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000078.1 RefSeq region 1 77047 . + . ID=NZ_JJMC01000078.1:1..77047;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000078.1 RefSeq gene 23 781 . - . ID=gene-AB25_RS03145;Name=phnP;gbkey=Gene;gene=phnP;gene_biotype=protein_coding;locus_tag=AB25_RS03145;old_locus_tag=AB25_4702 NZ_JJMC01000078.1 Protein Homology CDS 23 781 . - 0 ID=cds-WP_000059928.1;Parent=gene-AB25_RS03145;Dbxref=GenBank:WP_000059928.1;Name=WP_000059928.1;Ontology_term=GO:0019700,GO:0008081;gbkey=CDS;gene=phnP;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418516.1;locus_tag=AB25_RS03145;product=phosphonate metabolism protein PhnP;protein_id=WP_000059928.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 783 1217 . - . ID=gene-AB25_RS03140;Name=phnO;gbkey=Gene;gene=phnO;gene_biotype=protein_coding;locus_tag=AB25_RS03140;old_locus_tag=AB25_4703 NZ_JJMC01000078.1 Protein Homology CDS 783 1217 . - 0 ID=cds-WP_001110490.1;Parent=gene-AB25_RS03140;Dbxref=GenBank:WP_001110490.1;Name=WP_001110490.1;gbkey=CDS;gene=phnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418517.1;locus_tag=AB25_RS03140;product=aminoalkylphosphonate N-acetyltransferase;protein_id=WP_001110490.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 1204 1761 . - . ID=gene-AB25_RS03135;Name=phnN;gbkey=Gene;gene=phnN;gene_biotype=protein_coding;locus_tag=AB25_RS03135;old_locus_tag=AB25_4704 NZ_JJMC01000078.1 Protein Homology CDS 1204 1761 . - 0 ID=cds-WP_000971891.1;Parent=gene-AB25_RS03135;Dbxref=GenBank:WP_000971891.1;Name=WP_000971891.1;Ontology_term=GO:0006015,GO:0033863;gbkey=CDS;gene=phnN;go_function=ribose 1%2C5-bisphosphate phosphokinase activity|0033863||IEA;go_process=5-phosphoribose 1-diphosphate biosynthetic process|0006015||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418518.1;locus_tag=AB25_RS03135;product=ribose 1%2C5-bisphosphokinase;protein_id=WP_000971891.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 1761 2897 . - . ID=gene-AB25_RS03130;Name=phnM;gbkey=Gene;gene=phnM;gene_biotype=protein_coding;locus_tag=AB25_RS03130;old_locus_tag=AB25_4705 NZ_JJMC01000078.1 Protein Homology CDS 1761 2897 . - 0 ID=cds-WP_000586282.1;Parent=gene-AB25_RS03130;Dbxref=GenBank:WP_000586282.1;Name=WP_000586282.1;Ontology_term=GO:0019700,GO:0016810;gbkey=CDS;gene=phnM;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313105.1;locus_tag=AB25_RS03130;product=alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase;protein_id=WP_000586282.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 2894 3574 . - . ID=gene-AB25_RS03125;Name=phnL;gbkey=Gene;gene=phnL;gene_biotype=protein_coding;locus_tag=AB25_RS03125;old_locus_tag=AB25_4706 NZ_JJMC01000078.1 Protein Homology CDS 2894 3574 . - 0 ID=cds-WP_000611419.1;Parent=gene-AB25_RS03125;Dbxref=GenBank:WP_000611419.1;Name=WP_000611419.1;Ontology_term=GO:0019634,GO:0018835;gbkey=CDS;gene=phnL;go_function=carbon phosphorus lyase activity|0018835||IEA;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313106.1;locus_tag=AB25_RS03125;product=phosphonate C-P lyase system protein PhnL;protein_id=WP_000611419.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 3758 4516 . - . ID=gene-AB25_RS03120;Name=phnK;gbkey=Gene;gene=phnK;gene_biotype=protein_coding;locus_tag=AB25_RS03120;old_locus_tag=AB25_4708 NZ_JJMC01000078.1 Protein Homology CDS 3758 4516 . - 0 ID=cds-WP_001075526.1;Parent=gene-AB25_RS03120;Dbxref=GenBank:WP_001075526.1;Name=WP_001075526.1;Ontology_term=GO:0019634,GO:0018835;gbkey=CDS;gene=phnK;go_function=carbon phosphorus lyase activity|0018835||IEA;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026282.1;locus_tag=AB25_RS03120;product=phosphonate C-P lyase system protein PhnK;protein_id=WP_001075526.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 4513 5358 . - . ID=gene-AB25_RS03115;Name=phnJ;gbkey=Gene;gene=phnJ;gene_biotype=protein_coding;locus_tag=AB25_RS03115;old_locus_tag=AB25_4709 NZ_JJMC01000078.1 Protein Homology CDS 4513 5358 . - 0 ID=cds-WP_000002283.1;Parent=gene-AB25_RS03115;Dbxref=GenBank:WP_000002283.1;Name=WP_000002283.1;gbkey=CDS;gene=phnJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418522.1;locus_tag=AB25_RS03115;product=alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ;protein_id=WP_000002283.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 5351 6415 . - . ID=gene-AB25_RS03110;Name=phnI;gbkey=Gene;gene=phnI;gene_biotype=protein_coding;locus_tag=AB25_RS03110;old_locus_tag=AB25_4710 NZ_JJMC01000078.1 Protein Homology CDS 5351 6415 . - 0 ID=cds-WP_001325988.1;Parent=gene-AB25_RS03110;Dbxref=GenBank:WP_001325988.1;Name=WP_001325988.1;gbkey=CDS;gene=phnI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313109.1;locus_tag=AB25_RS03110;product=alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI;protein_id=WP_001325988.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 6415 6999 . - . ID=gene-AB25_RS03105;Name=phnH;gbkey=Gene;gene=phnH;gene_biotype=protein_coding;locus_tag=AB25_RS03105;old_locus_tag=AB25_4711 NZ_JJMC01000078.1 Protein Homology CDS 6415 6999 . - 0 ID=cds-WP_000171603.1;Parent=gene-AB25_RS03105;Dbxref=GenBank:WP_000171603.1;Name=WP_000171603.1;Ontology_term=GO:0019634;gbkey=CDS;gene=phnH;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313110.1;locus_tag=AB25_RS03105;product=phosphonate C-P lyase system protein PhnH;protein_id=WP_000171603.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 6996 7448 . - . ID=gene-AB25_RS03100;Name=phnG;gbkey=Gene;gene=phnG;gene_biotype=protein_coding;locus_tag=AB25_RS03100;old_locus_tag=AB25_4712 NZ_JJMC01000078.1 Protein Homology CDS 6996 7448 . - 0 ID=cds-WP_000542768.1;Parent=gene-AB25_RS03100;Dbxref=GenBank:WP_000542768.1;Name=WP_000542768.1;Ontology_term=GO:0015716,GO:0019634;gbkey=CDS;gene=phnG;go_process=organic phosphonate transport|0015716||IEA,organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418525.1;locus_tag=AB25_RS03100;product=phosphonate C-P lyase system protein PhnG;protein_id=WP_000542768.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 7449 8174 . - . ID=gene-AB25_RS03095;Name=phnF;gbkey=Gene;gene=phnF;gene_biotype=protein_coding;locus_tag=AB25_RS03095;old_locus_tag=AB25_4713 NZ_JJMC01000078.1 Protein Homology CDS 7449 8174 . - 0 ID=cds-WP_001295387.1;Parent=gene-AB25_RS03095;Dbxref=GenBank:WP_001295387.1;Name=WP_001295387.1;gbkey=CDS;gene=phnF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418526.1;locus_tag=AB25_RS03095;product=phosphonate metabolism transcriptional regulator PhnF;protein_id=WP_001295387.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 8195 8974 . - . ID=gene-AB25_RS03090;Name=phnE;gbkey=Gene;gene=phnE;gene_biotype=protein_coding;locus_tag=AB25_RS03090;old_locus_tag=AB25_4714 NZ_JJMC01000078.1 Protein Homology CDS 8195 8974 . - 0 ID=cds-WP_032171573.1;Parent=gene-AB25_RS03090;Dbxref=GenBank:WP_032171573.1;Name=WP_032171573.1;Ontology_term=GO:0015716,GO:0015416,GO:0005886,GO:0055052;gbkey=CDS;gene=phnE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type phosphonate transporter activity|0015416||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313113.2;locus_tag=AB25_RS03090;product=phosphonate ABC transporter%2C permease protein PhnE;protein_id=WP_032171573.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 9036 10052 . - . ID=gene-AB25_RS03085;Name=phnD;gbkey=Gene;gene=phnD;gene_biotype=protein_coding;locus_tag=AB25_RS03085;old_locus_tag=AB25_4715 NZ_JJMC01000078.1 Protein Homology CDS 9036 10052 . - 0 ID=cds-WP_000991990.1;Parent=gene-AB25_RS03085;Dbxref=GenBank:WP_000991990.1;Name=WP_000991990.1;Ontology_term=GO:0015716,GO:0043190;gbkey=CDS;gene=phnD;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418529.1;locus_tag=AB25_RS03085;product=phosphonate ABC transporter substrate-binding protein;protein_id=WP_000991990.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 10077 10865 . - . ID=gene-AB25_RS03080;Name=phnC;gbkey=Gene;gene=phnC;gene_biotype=protein_coding;locus_tag=AB25_RS03080;old_locus_tag=AB25_4716 NZ_JJMC01000078.1 Protein Homology CDS 10077 10865 . - 0 ID=cds-WP_001193397.1;Parent=gene-AB25_RS03080;Dbxref=GenBank:WP_001193397.1;Name=WP_001193397.1;gbkey=CDS;gene=phnC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709835.2;locus_tag=AB25_RS03080;product=phosphonate ABC transporter ATP-binding protein;protein_id=WP_001193397.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 10998 11441 . - . ID=gene-AB25_RS03075;Name=yjdN;gbkey=Gene;gene=yjdN;gene_biotype=protein_coding;locus_tag=AB25_RS03075;old_locus_tag=AB25_4717 NZ_JJMC01000078.1 Protein Homology CDS 10998 11441 . - 0 ID=cds-WP_001131322.1;Parent=gene-AB25_RS03075;Dbxref=GenBank:WP_001131322.1;Name=WP_001131322.1;gbkey=CDS;gene=yjdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418531.1;locus_tag=AB25_RS03075;product=VOC family metalloprotein YjdN;protein_id=WP_001131322.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 11601 11936 . - . ID=gene-AB25_RS03070;Name=yjdM;gbkey=Gene;gene=yjdM;gene_biotype=protein_coding;locus_tag=AB25_RS03070;old_locus_tag=AB25_4718 NZ_JJMC01000078.1 Protein Homology CDS 11601 11936 . - 0 ID=cds-WP_001300891.1;Parent=gene-AB25_RS03070;Dbxref=GenBank:WP_001300891.1;Name=WP_001300891.1;gbkey=CDS;gene=yjdM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313117.1;locus_tag=AB25_RS03070;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_001300891.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 12338 14566 . + . ID=gene-AB25_RS03065;Name=crfC;gbkey=Gene;gene=crfC;gene_biotype=protein_coding;locus_tag=AB25_RS03065;old_locus_tag=AB25_4719 NZ_JJMC01000078.1 Protein Homology CDS 12338 14566 . + 0 ID=cds-WP_000288597.1;Parent=gene-AB25_RS03065;Dbxref=GenBank:WP_000288597.1;Name=WP_000288597.1;Ontology_term=GO:0005525;gbkey=CDS;gene=crfC;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418533.1;locus_tag=AB25_RS03065;product=clamp-binding protein CrfC;protein_id=WP_000288597.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 14563 15441 . + . ID=gene-AB25_RS03060;Name=rdcB;gbkey=Gene;gene=rdcB;gene_biotype=protein_coding;locus_tag=AB25_RS03060;old_locus_tag=AB25_4720 NZ_JJMC01000078.1 Protein Homology CDS 14563 15441 . + 0 ID=cds-WP_000169198.1;Parent=gene-AB25_RS03060;Dbxref=GenBank:WP_000169198.1;Name=WP_000169198.1;gbkey=CDS;gene=rdcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418534.4;locus_tag=AB25_RS03060;product=YjcZ-like family protein;protein_id=WP_000169198.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 15705 17207 . + . ID=gene-AB25_RS03055;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=AB25_RS03055;old_locus_tag=AB25_4721 NZ_JJMC01000078.1 Protein Homology CDS 15705 17207 . + 0 ID=cds-WP_001296882.1;Parent=gene-AB25_RS03055;Dbxref=GenBank:WP_001296882.1;Name=WP_001296882.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=proP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709830.2;locus_tag=AB25_RS03055;product=glycine betaine/L-proline transporter ProP;protein_id=WP_001296882.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 17319 17408 . + . ID=gene-AB25_RS0126530;Name=pmrR;gbkey=Gene;gene=pmrR;gene_biotype=protein_coding;locus_tag=AB25_RS0126530 NZ_JJMC01000078.1 Protein Homology CDS 17319 17408 . + 0 ID=cds-WP_000797656.1;Parent=gene-AB25_RS0126530;Dbxref=GenBank:WP_000797656.1;Name=WP_000797656.1;gbkey=CDS;gene=pmrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000797656.1;locus_tag=AB25_RS0126530;product=LpxT activity modulator PmrR;protein_id=WP_000797656.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 17384 18484 . - . ID=gene-AB25_RS03050;Name=pmrB;gbkey=Gene;gene=pmrB;gene_biotype=protein_coding;locus_tag=AB25_RS03050;old_locus_tag=AB25_4722 NZ_JJMC01000078.1 Protein Homology CDS 17384 18484 . - 0 ID=cds-WP_162752884.1;Parent=gene-AB25_RS03050;Dbxref=GenBank:WP_162752884.1;Name=WP_162752884.1;gbkey=CDS;gene=pmrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709829.1;locus_tag=AB25_RS03050;product=two-component system sensor histidine kinase PmrB;protein_id=WP_162752884.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 18485 19153 . - . ID=gene-AB25_RS03045;Name=basR;gbkey=Gene;gene=basR;gene_biotype=protein_coding;locus_tag=AB25_RS03045;old_locus_tag=AB25_4723 NZ_JJMC01000078.1 Protein Homology CDS 18485 19153 . - 0 ID=cds-WP_000697919.1;Parent=gene-AB25_RS03045;Dbxref=GenBank:WP_000697919.1;Name=WP_000697919.1;gbkey=CDS;gene=basR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313122.1;locus_tag=AB25_RS03045;product=two-component system response regulator BasR;protein_id=WP_000697919.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 19150 20793 . - . ID=gene-AB25_RS03040;Name=eptA;gbkey=Gene;gene=eptA;gene_biotype=protein_coding;locus_tag=AB25_RS03040;old_locus_tag=AB25_4724 NZ_JJMC01000078.1 Protein Homology CDS 19150 20793 . - 0 ID=cds-WP_001298860.1;Parent=gene-AB25_RS03040;Dbxref=GenBank:WP_001298860.1;Name=WP_001298860.1;Ontology_term=GO:0016772;gbkey=CDS;gene=eptA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418538.2;locus_tag=AB25_RS03040;product=phosphoethanolamine transferase EptA;protein_id=WP_001298860.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 20897 22234 . - . ID=gene-AB25_RS03035;Name=adiC;gbkey=Gene;gene=adiC;gene_biotype=protein_coding;locus_tag=AB25_RS03035;old_locus_tag=AB25_4725 NZ_JJMC01000078.1 Protein Homology CDS 20897 22234 . - 0 ID=cds-WP_000093154.1;Parent=gene-AB25_RS03035;Dbxref=GenBank:WP_000093154.1;Name=WP_000093154.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=adiC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313124.1;locus_tag=AB25_RS03035;product=arginine/agmatine antiporter;protein_id=WP_000093154.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 22371 23132 . - . ID=gene-AB25_RS03030;Name=adiY;gbkey=Gene;gene=adiY;gene_biotype=protein_coding;locus_tag=AB25_RS03030;old_locus_tag=AB25_4726 NZ_JJMC01000078.1 Protein Homology CDS 22371 23132 . - 0 ID=cds-WP_001217059.1;Parent=gene-AB25_RS03030;Dbxref=GenBank:WP_001217059.1;Name=WP_001217059.1;gbkey=CDS;gene=adiY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313125.1;locus_tag=AB25_RS03030;product=DNA-binding transcriptional activator AdiY;protein_id=WP_001217059.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 23457 25724 . - . ID=gene-AB25_RS03025;Name=adiA;gbkey=Gene;gene=adiA;gene_biotype=protein_coding;locus_tag=AB25_RS03025;old_locus_tag=AB25_4727 NZ_JJMC01000078.1 Protein Homology CDS 23457 25724 . - 0 ID=cds-WP_001307519.1;Parent=gene-AB25_RS03025;Dbxref=GenBank:WP_001307519.1;Name=WP_001307519.1;Ontology_term=GO:0006520,GO:0016831;gbkey=CDS;gene=adiA;go_function=carboxy-lyase activity|0016831||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418541.2;locus_tag=AB25_RS03025;product=arginine decarboxylase;protein_id=WP_001307519.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 25923 26831 . - . ID=gene-AB25_RS03020;Name=melR;gbkey=Gene;gene=melR;gene_biotype=protein_coding;locus_tag=AB25_RS03020;old_locus_tag=AB25_4728 NZ_JJMC01000078.1 Protein Homology CDS 25923 26831 . - 0 ID=cds-WP_001090758.1;Parent=gene-AB25_RS03020;Dbxref=GenBank:WP_001090758.1;Name=WP_001090758.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=melR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418542.1;locus_tag=AB25_RS03020;product=transcriptional regulator MelR;protein_id=WP_001090758.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 27114 28469 . + . ID=gene-AB25_RS03015;Name=melA;gbkey=Gene;gene=melA;gene_biotype=protein_coding;locus_tag=AB25_RS03015;old_locus_tag=AB25_4729 NZ_JJMC01000078.1 Protein Homology CDS 27114 28469 . + 0 ID=cds-WP_000988020.1;Parent=gene-AB25_RS03015;Dbxref=GenBank:WP_000988020.1;Name=WP_000988020.1;gbkey=CDS;gene=melA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418543.1;locus_tag=AB25_RS03015;product=alpha-galactosidase;protein_id=WP_000988020.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 28572 29993 . + . ID=gene-AB25_RS03010;Name=melB;gbkey=Gene;gene=melB;gene_biotype=protein_coding;locus_tag=AB25_RS03010;old_locus_tag=AB25_4730 NZ_JJMC01000078.1 Protein Homology CDS 28572 29993 . + 0 ID=cds-WP_000028114.1;Parent=gene-AB25_RS03010;Dbxref=GenBank:WP_000028114.1;Name=WP_000028114.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;gene=melB;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418544.2;locus_tag=AB25_RS03010;product=melibiose:sodium transporter MelB;protein_id=WP_000028114.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 30132 30761 . - . ID=gene-AB25_RS03005;Name=yjdF;gbkey=Gene;gene=yjdF;gene_biotype=protein_coding;locus_tag=AB25_RS03005;old_locus_tag=AB25_4731 NZ_JJMC01000078.1 Protein Homology CDS 30132 30761 . - 0 ID=cds-WP_000198733.1;Parent=gene-AB25_RS03005;Dbxref=GenBank:WP_000198733.1;Name=WP_000198733.1;gbkey=CDS;gene=yjdF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313130.1;locus_tag=AB25_RS03005;product=DUF2238 domain-containing protein;protein_id=WP_000198733.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 30884 32530 . - . ID=gene-AB25_RS03000;Name=fumB;gbkey=Gene;gene=fumB;gene_biotype=protein_coding;locus_tag=AB25_RS03000;old_locus_tag=AB25_4732 NZ_JJMC01000078.1 Protein Homology CDS 30884 32530 . - 0 ID=cds-WP_000066681.1;Parent=gene-AB25_RS03000;Dbxref=GenBank:WP_000066681.1;Name=WP_000066681.1;gbkey=CDS;gene=fumB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418546.1;locus_tag=AB25_RS03000;product=class I fumarate hydratase;protein_id=WP_000066681.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 32608 33948 . - . ID=gene-AB25_RS02995;Name=dcuB;gbkey=Gene;gene=dcuB;gene_biotype=protein_coding;locus_tag=AB25_RS02995;old_locus_tag=AB25_4733 NZ_JJMC01000078.1 Protein Homology CDS 32608 33948 . - 0 ID=cds-WP_000899522.1;Parent=gene-AB25_RS02995;Dbxref=GenBank:WP_000899522.1;Name=WP_000899522.1;gbkey=CDS;gene=dcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313132.1;locus_tag=AB25_RS02995;product=anaerobic C4-dicarboxylate transporter DcuB;protein_id=WP_000899522.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 34519 35238 . - . ID=gene-AB25_RS02990;Name=dcuR;gbkey=Gene;gene=dcuR;gene_biotype=protein_coding;locus_tag=AB25_RS02990;old_locus_tag=AB25_4734 NZ_JJMC01000078.1 Protein Homology CDS 34519 35238 . - 0 ID=cds-WP_000611288.1;Parent=gene-AB25_RS02990;Dbxref=GenBank:WP_000611288.1;Name=WP_000611288.1;Ontology_term=GO:0000160,GO:0003700;gbkey=CDS;gene=dcuR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313133.1;locus_tag=AB25_RS02990;product=two-component system response regulator DcuR;protein_id=WP_000611288.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 35235 36866 . - . ID=gene-AB25_RS02985;Name=dcuS;gbkey=Gene;gene=dcuS;gene_biotype=protein_coding;locus_tag=AB25_RS02985;old_locus_tag=AB25_4735 NZ_JJMC01000078.1 Protein Homology CDS 35235 36866 . - 0 ID=cds-WP_001216487.1;Parent=gene-AB25_RS02985;Dbxref=GenBank:WP_001216487.1;Name=WP_001216487.1;gbkey=CDS;gene=dcuS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313134.1;locus_tag=AB25_RS02985;product=sensor histidine kinase;protein_id=WP_001216487.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 37047 37277 . + . ID=gene-AB25_RS02980;Name=yjdI;gbkey=Gene;gene=yjdI;gene_biotype=protein_coding;locus_tag=AB25_RS02980;old_locus_tag=AB25_4737 NZ_JJMC01000078.1 Protein Homology CDS 37047 37277 . + 0 ID=cds-WP_000371700.1;Parent=gene-AB25_RS02980;Dbxref=GenBank:WP_000371700.1;Name=WP_000371700.1;gbkey=CDS;gene=yjdI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313135.1;locus_tag=AB25_RS02980;product=4Fe-4S mono-cluster protein YjdI;protein_id=WP_000371700.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 37289 37561 . + . ID=gene-AB25_RS02975;Name=yjdJ;gbkey=Gene;gene=yjdJ;gene_biotype=protein_coding;locus_tag=AB25_RS02975;old_locus_tag=AB25_4738 NZ_JJMC01000078.1 Protein Homology CDS 37289 37561 . + 0 ID=cds-WP_000405647.1;Parent=gene-AB25_RS02975;Dbxref=GenBank:WP_000405647.1;Name=WP_000405647.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;gene=yjdJ;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313136.1;locus_tag=AB25_RS02975;product=GNAT family N-acetyltransferase;protein_id=WP_000405647.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 37788 38084 . + . ID=gene-AB25_RS02970;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;locus_tag=AB25_RS02970;old_locus_tag=AB25_4739 NZ_JJMC01000078.1 Protein Homology CDS 37788 38084 . + 0 ID=cds-WP_001425728.1;Parent=gene-AB25_RS02970;Dbxref=GenBank:WP_001425728.1;Name=WP_001425728.1;gbkey=CDS;gene=ghoS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313137.1;locus_tag=AB25_RS02970;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=WP_001425728.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 38112 38285 . + . ID=gene-AB25_RS02965;Name=ghoT;gbkey=Gene;gene=ghoT;gene_biotype=protein_coding;locus_tag=AB25_RS02965;old_locus_tag=AB25_4740 NZ_JJMC01000078.1 Protein Homology CDS 38112 38285 . + 0 ID=cds-WP_001173343.1;Parent=gene-AB25_RS02965;Dbxref=GenBank:WP_001173343.1;Name=WP_001173343.1;gbkey=CDS;gene=ghoT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588474.1;locus_tag=AB25_RS02965;product=type V toxin-antitoxin system toxin GhoT;protein_id=WP_001173343.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 38404 39921 . - . ID=gene-AB25_RS02960;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=AB25_RS02960;old_locus_tag=AB25_4741 NZ_JJMC01000078.1 Protein Homology CDS 38404 39921 . - 0 ID=cds-WP_001295074.1;Parent=gene-AB25_RS02960;Dbxref=GenBank:WP_001295074.1;Name=WP_001295074.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=AB25_RS02960;product=lysine--tRNA ligase;protein_id=WP_001295074.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 40158 41615 . - . ID=gene-AB25_RS02955;Name=dtpC;gbkey=Gene;gene=dtpC;gene_biotype=protein_coding;locus_tag=AB25_RS02955;old_locus_tag=AB25_4742 NZ_JJMC01000078.1 Protein Homology CDS 40158 41615 . - 0 ID=cds-WP_000856841.1;Parent=gene-AB25_RS02955;Dbxref=GenBank:WP_000856841.1;Name=WP_000856841.1;gbkey=CDS;gene=dtpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418554.1;locus_tag=AB25_RS02955;product=dipeptide/tripeptide permease DtpC;protein_id=WP_000856841.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 41674 43821 . - . ID=gene-AB25_RS02950;Name=cadA;gbkey=Gene;gene=cadA;gene_biotype=protein_coding;locus_tag=AB25_RS02950;old_locus_tag=AB25_4743 NZ_JJMC01000078.1 Protein Homology CDS 41674 43821 . - 0 ID=cds-WP_001295383.1;Parent=gene-AB25_RS02950;Dbxref=GenBank:WP_001295383.1;Name=WP_001295383.1;gbkey=CDS;gene=cadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313140.1;locus_tag=AB25_RS02950;product=lysine decarboxylase CadA;protein_id=WP_001295383.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 43901 45235 . - . ID=gene-AB25_RS02945;Name=cadB;gbkey=Gene;gene=cadB;gene_biotype=protein_coding;locus_tag=AB25_RS02945;old_locus_tag=AB25_4744 NZ_JJMC01000078.1 Protein Homology CDS 43901 45235 . - 0 ID=cds-WP_000092909.1;Parent=gene-AB25_RS02945;Dbxref=GenBank:WP_000092909.1;Name=WP_000092909.1;Ontology_term=GO:0043872;gbkey=CDS;gene=cadB;go_function=lysine:cadaverine antiporter activity|0043872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313141.1;locus_tag=AB25_RS02945;product=cadaverine/lysine antiporter;protein_id=WP_000092909.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 45601 47139 . - . ID=gene-AB25_RS02940;Name=cadC;gbkey=Gene;gene=cadC;gene_biotype=protein_coding;locus_tag=AB25_RS02940;old_locus_tag=AB25_4745 NZ_JJMC01000078.1 Protein Homology CDS 45601 47139 . - 0 ID=cds-WP_001187182.1;Parent=gene-AB25_RS02940;Dbxref=GenBank:WP_001187182.1;Name=WP_001187182.1;gbkey=CDS;gene=cadC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313142.1;locus_tag=AB25_RS02940;product=lysine decarboxylation/transport transcriptional activator CadC;protein_id=WP_001187182.1;transl_table=11 NZ_JJMC01000078.1 RefSeq pseudogene 47399 47558 . - . ID=gene-AB25_RS32845;Name=AB25_RS32845;end_range=47558,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32845;partial=true;pseudo=true NZ_JJMC01000078.1 Protein Homology CDS 47399 47558 . - 0 ID=cds-AB25_RS32845;Parent=gene-AB25_RS32845;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=47558,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001218818.1;locus_tag=AB25_RS32845;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 47756 47831 . - . ID=gene-AB25_RS02935;Name=AB25_RS02935;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS02935;old_locus_tag=AB25_4746 NZ_JJMC01000078.1 tRNAscan-SE tRNA 47756 47831 . - . ID=rna-AB25_RS02935;Parent=gene-AB25_RS02935;anticodon=(pos:complement(47796..47798));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS02935;product=tRNA-Phe NZ_JJMC01000078.1 tRNAscan-SE exon 47756 47831 . - . ID=exon-AB25_RS02935-1;Parent=rna-AB25_RS02935;anticodon=(pos:complement(47796..47798));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS02935;product=tRNA-Phe NZ_JJMC01000078.1 RefSeq gene 47938 48513 . - . ID=gene-AB25_RS02930;Name=dicD;gbkey=Gene;gene=dicD;gene_biotype=protein_coding;locus_tag=AB25_RS02930;old_locus_tag=AB25_4747 NZ_JJMC01000078.1 Protein Homology CDS 47938 48513 . - 0 ID=cds-WP_001188520.1;Parent=gene-AB25_RS02930;Dbxref=GenBank:WP_001188520.1;Name=WP_001188520.1;Ontology_term=GO:0003677;gbkey=CDS;gene=dicD;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710000.1;locus_tag=AB25_RS02930;product=transcriptional regulator;protein_id=WP_001188520.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 48550 50247 . - . ID=gene-AB25_RS02925;Name=dsbD;gbkey=Gene;gene=dsbD;gene_biotype=protein_coding;locus_tag=AB25_RS02925;old_locus_tag=AB25_4748 NZ_JJMC01000078.1 Protein Homology CDS 48550 50247 . - 0 ID=cds-WP_000068978.1;Parent=gene-AB25_RS02925;Dbxref=GenBank:WP_000068978.1;Name=WP_000068978.1;gbkey=CDS;gene=dsbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710001.1;locus_tag=AB25_RS02925;product=protein-disulfide reductase DsbD;protein_id=WP_000068978.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 50223 50561 . - . ID=gene-AB25_RS02920;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=AB25_RS02920;old_locus_tag=AB25_4749 NZ_JJMC01000078.1 Protein Homology CDS 50223 50561 . - 0 ID=cds-WP_000883400.1;Parent=gene-AB25_RS02920;Dbxref=GenBank:WP_000883400.1;Name=WP_000883400.1;gbkey=CDS;gene=cutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313145.1;locus_tag=AB25_RS02920;product=divalent cation tolerance protein CutA;protein_id=WP_000883400.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 50677 51978 . - . ID=gene-AB25_RS02915;Name=dcuA;gbkey=Gene;gene=dcuA;gene_biotype=protein_coding;locus_tag=AB25_RS02915;old_locus_tag=AB25_4750 NZ_JJMC01000078.1 Protein Homology CDS 50677 51978 . - 0 ID=cds-WP_000961957.1;Parent=gene-AB25_RS02915;Dbxref=GenBank:WP_000961957.1;Name=WP_000961957.1;gbkey=CDS;gene=dcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313146.1;locus_tag=AB25_RS02915;product=anaerobic C4-dicarboxylate transporter DcuA;protein_id=WP_000961957.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 52096 53532 . - . ID=gene-AB25_RS02910;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=AB25_RS02910;old_locus_tag=AB25_4751 NZ_JJMC01000078.1 Protein Homology CDS 52096 53532 . - 0 ID=cds-WP_000069437.1;Parent=gene-AB25_RS02910;Dbxref=GenBank:WP_000069437.1;Name=WP_000069437.1;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313147.2;locus_tag=AB25_RS02910;product=aspartate ammonia-lyase;protein_id=WP_000069437.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 53869 54345 . + . ID=gene-AB25_RS02905;Name=fxsA;gbkey=Gene;gene=fxsA;gene_biotype=protein_coding;locus_tag=AB25_RS02905;old_locus_tag=AB25_4752 NZ_JJMC01000078.1 Protein Homology CDS 53869 54345 . + 0 ID=cds-WP_001267448.1;Parent=gene-AB25_RS02905;Dbxref=GenBank:WP_001267448.1;Name=WP_001267448.1;Ontology_term=GO:0005886;gbkey=CDS;gene=fxsA;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418564.2;locus_tag=AB25_RS02905;product=FxsA family protein;protein_id=WP_001267448.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 54361 55617 . - . ID=gene-AB25_RS02900;Name=yjeH;gbkey=Gene;gene=yjeH;gene_biotype=protein_coding;locus_tag=AB25_RS02900;old_locus_tag=AB25_4753 NZ_JJMC01000078.1 Protein Homology CDS 54361 55617 . - 0 ID=cds-WP_000015837.1;Parent=gene-AB25_RS02900;Dbxref=GenBank:WP_000015837.1;Name=WP_000015837.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjeH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418565.1;locus_tag=AB25_RS02900;product=L-methionine/branched-chain amino acid transporter;protein_id=WP_000015837.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 55893 56186 . + . ID=gene-AB25_RS02895;Name=groS;gbkey=Gene;gene=groS;gene_biotype=protein_coding;locus_tag=AB25_RS02895;old_locus_tag=AB25_4754 NZ_JJMC01000078.1 Protein Homology CDS 55893 56186 . + 0 ID=cds-WP_001026276.1;Parent=gene-AB25_RS02895;Dbxref=GenBank:WP_001026276.1;Name=WP_001026276.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;gene=groS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027827.1;locus_tag=AB25_RS02895;product=co-chaperone GroES;protein_id=WP_001026276.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 56230 57876 . + . ID=gene-AB25_RS02890;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=AB25_RS02890;old_locus_tag=AB25_4755 NZ_JJMC01000078.1 Protein Homology CDS 56230 57876 . + 0 ID=cds-WP_000729117.1;Parent=gene-AB25_RS02890;Dbxref=GenBank:WP_000729117.1;Name=WP_000729117.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1;locus_tag=AB25_RS02890;product=chaperonin GroEL;protein_id=WP_000729117.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 58014 58367 . + . ID=gene-AB25_RS02885;Name=yjeI;gbkey=Gene;gene=yjeI;gene_biotype=protein_coding;locus_tag=AB25_RS02885;old_locus_tag=AB25_4756 NZ_JJMC01000078.1 Protein Homology CDS 58014 58367 . + 0 ID=cds-WP_000558209.1;Parent=gene-AB25_RS02885;Dbxref=GenBank:WP_000558209.1;Name=WP_000558209.1;gbkey=CDS;gene=yjeI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418568.2;locus_tag=AB25_RS02885;product=DUF4156 domain-containing protein;protein_id=WP_000558209.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 58560 59429 . - . ID=gene-AB25_RS02880;Name=yjeJ;gbkey=Gene;gene=yjeJ;gene_biotype=protein_coding;locus_tag=AB25_RS02880;old_locus_tag=AB25_4757 NZ_JJMC01000078.1 Protein Homology CDS 58560 59429 . - 0 ID=cds-WP_001008044.1;Parent=gene-AB25_RS02880;Dbxref=GenBank:WP_001008044.1;Name=WP_001008044.1;gbkey=CDS;gene=yjeJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313153.1;locus_tag=AB25_RS02880;product=YjeJ family protein;protein_id=WP_001008044.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 59824 60852 . - . ID=gene-AB25_RS02875;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=AB25_RS02875;old_locus_tag=AB25_4758 NZ_JJMC01000078.1 Protein Homology CDS 59824 60852 . - 0 ID=cds-WP_000940530.1;Parent=gene-AB25_RS02875;Dbxref=GenBank:WP_000940530.1;Name=WP_000940530.1;gbkey=CDS;gene=epmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710013.1;locus_tag=AB25_RS02875;product=EF-P beta-lysylation protein EpmB;protein_id=WP_000940530.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 60894 61460 . + . ID=gene-AB25_RS02870;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=AB25_RS02870;old_locus_tag=AB25_4759 NZ_JJMC01000078.1 Protein Homology CDS 60894 61460 . + 0 ID=cds-WP_000257278.1;Parent=gene-AB25_RS02870;Dbxref=GenBank:WP_000257278.1;Name=WP_000257278.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=AB25_RS02870;product=elongation factor P;protein_id=WP_000257278.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 61512 61637 . + . ID=gene-AB25_RS02865;Name=ecnA;gbkey=Gene;gene=ecnA;gene_biotype=protein_coding;locus_tag=AB25_RS02865;old_locus_tag=AB25_4760 NZ_JJMC01000078.1 Protein Homology CDS 61512 61637 . + 0 ID=cds-WP_000977757.1;Parent=gene-AB25_RS02865;Dbxref=GenBank:WP_000977757.1;Name=WP_000977757.1;gbkey=CDS;gene=ecnA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026283.1;locus_tag=AB25_RS02865;product=lipoprotein antitoxin entericidin A;protein_id=WP_000977757.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 61748 61894 . + . ID=gene-AB25_RS02860;Name=ecnB;gbkey=Gene;gene=ecnB;gene_biotype=protein_coding;locus_tag=AB25_RS02860;old_locus_tag=AB25_4761 NZ_JJMC01000078.1 Protein Homology CDS 61748 61894 . + 0 ID=cds-WP_000239596.1;Parent=gene-AB25_RS02860;Dbxref=GenBank:WP_000239596.1;Name=WP_000239596.1;gbkey=CDS;gene=ecnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710016.1;locus_tag=AB25_RS02860;product=lipoprotein toxin entericidin B;protein_id=WP_000239596.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 62069 62386 . + . ID=gene-AB25_RS02855;Name=sugE;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;locus_tag=AB25_RS02855;old_locus_tag=AB25_4762 NZ_JJMC01000078.1 Protein Homology CDS 62069 62386 . + 0 ID=cds-WP_000118482.1;Parent=gene-AB25_RS02855;Dbxref=GenBank:WP_000118482.1;Name=WP_000118482.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=sugE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418572.4;locus_tag=AB25_RS02855;product=quaternary ammonium compound efflux SMR transporter SugE;protein_id=WP_000118482.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 62383 62916 . - . ID=gene-AB25_RS02850;Name=blc;gbkey=Gene;gene=blc;gene_biotype=protein_coding;locus_tag=AB25_RS02850;old_locus_tag=AB25_4763 NZ_JJMC01000078.1 Protein Homology CDS 62383 62916 . - 0 ID=cds-WP_001238369.1;Parent=gene-AB25_RS02850;Dbxref=GenBank:WP_001238369.1;Name=WP_001238369.1;gbkey=CDS;gene=blc;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313157.1;locus_tag=AB25_RS02850;product=lipocalin Blc;protein_id=WP_001238369.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 63005 64138 . - . ID=gene-AB25_RS02845;Name=ampC;gbkey=Gene;gene=ampC;gene_biotype=protein_coding;locus_tag=AB25_RS02845;old_locus_tag=AB25_4764 NZ_JJMC01000078.1 Protein Homology CDS 63005 64138 . - 0 ID=cds-WP_001339477.1;Parent=gene-AB25_RS02845;Dbxref=GenBank:WP_001339477.1;Name=WP_001339477.1;Ontology_term=GO:0008800;gbkey=CDS;gene=ampC;go_function=beta-lactamase activity|0008800||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001336292.1;locus_tag=AB25_RS02845;product=BlaEC family class C beta-lactamase;protein_id=WP_001339477.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 64201 64560 . - . ID=gene-AB25_RS02840;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=AB25_RS02840;old_locus_tag=AB25_4765 NZ_JJMC01000078.1 Protein Homology CDS 64201 64560 . - 0 ID=cds-WP_032171574.1;Parent=gene-AB25_RS02840;Dbxref=GenBank:WP_032171574.1;Name=WP_032171574.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313159.1;locus_tag=AB25_RS02840;product=fumarate reductase subunit FrdD;protein_id=WP_032171574.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 64571 64966 . - . ID=gene-AB25_RS02835;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=AB25_RS02835;old_locus_tag=AB25_4766 NZ_JJMC01000078.1 Protein Homology CDS 64571 64966 . - 0 ID=cds-WP_000208757.1;Parent=gene-AB25_RS02835;Dbxref=GenBank:WP_000208757.1;Name=WP_000208757.1;Ontology_term=GO:0016020;gbkey=CDS;gene=frdC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313160.1;locus_tag=AB25_RS02835;product=fumarate reductase subunit FrdC;protein_id=WP_000208757.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 64977 65711 . - . ID=gene-AB25_RS02830;Name=frdB;gbkey=Gene;gene=frdB;gene_biotype=protein_coding;locus_tag=AB25_RS02830;old_locus_tag=AB25_4767 NZ_JJMC01000078.1 Protein Homology CDS 64977 65711 . - 0 ID=cds-WP_000829498.1;Parent=gene-AB25_RS02830;Dbxref=GenBank:WP_000829498.1;Name=WP_000829498.1;gbkey=CDS;gene=frdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882957.1;locus_tag=AB25_RS02830;product=fumarate reductase iron-sulfur protein;protein_id=WP_000829498.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 65704 67512 . - . ID=gene-AB25_RS02825;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=AB25_RS02825;old_locus_tag=AB25_4768 NZ_JJMC01000078.1 Protein Homology CDS 65704 67512 . - 0 ID=cds-WP_001192973.1;Parent=gene-AB25_RS02825;Dbxref=GenBank:WP_001192973.1;Name=WP_001192973.1;Ontology_term=GO:0009061,GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;gene=frdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=anaerobic respiration|0009061||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418578.1;locus_tag=AB25_RS02825;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=WP_001192973.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 67837 68814 . + . ID=gene-AB25_RS02820;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=AB25_RS02820;old_locus_tag=AB25_4769 NZ_JJMC01000078.1 Protein Homology CDS 67837 68814 . + 0 ID=cds-WP_000004770.1;Parent=gene-AB25_RS02820;Dbxref=GenBank:WP_000004770.1;Name=WP_000004770.1;Ontology_term=GO:0006418,GO:0004812;gbkey=CDS;gene=epmA;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004771.1;locus_tag=AB25_RS02820;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_000004770.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 69033 70535 . + . ID=gene-AB25_RS02815;Name=yjeM;gbkey=Gene;gene=yjeM;gene_biotype=protein_coding;locus_tag=AB25_RS02815;old_locus_tag=AB25_4770 NZ_JJMC01000078.1 Protein Homology CDS 69033 70535 . + 0 ID=cds-WP_001339478.1;Parent=gene-AB25_RS02815;Dbxref=GenBank:WP_001339478.1;Name=WP_001339478.1;Ontology_term=GO:0022857;gbkey=CDS;gene=yjeM;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418580.2;locus_tag=AB25_RS02815;product=glutamate/gamma-aminobutyrate family transporter YjeM;protein_id=WP_001339478.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 70686 74009 . - . ID=gene-AB25_RS02810;Name=mscM;gbkey=Gene;gene=mscM;gene_biotype=protein_coding;locus_tag=AB25_RS02810;old_locus_tag=AB25_4771 NZ_JJMC01000078.1 Protein Homology CDS 70686 74009 . - 0 ID=cds-WP_001236847.1;Parent=gene-AB25_RS02810;Dbxref=GenBank:WP_001236847.1;Name=WP_001236847.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscM;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418583.1;locus_tag=AB25_RS02810;product=miniconductance mechanosensitive channel MscM;protein_id=WP_001236847.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 74031 74999 . - . ID=gene-AB25_RS02805;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=AB25_RS02805;old_locus_tag=AB25_4772 NZ_JJMC01000078.1 Protein Homology CDS 74031 74999 . - 0 ID=cds-WP_000934920.1;Parent=gene-AB25_RS02805;Dbxref=GenBank:WP_000934920.1;Name=WP_000934920.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313166.1;locus_tag=AB25_RS02805;product=archaetidylserine decarboxylase;protein_id=WP_000934920.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 75096 76148 . - . ID=gene-AB25_RS02800;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=AB25_RS02800;old_locus_tag=AB25_4773 NZ_JJMC01000078.1 Protein Homology CDS 75096 76148 . - 0 ID=cds-WP_000041970.1;Parent=gene-AB25_RS02800;Dbxref=GenBank:WP_000041970.1;Name=WP_000041970.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313167.2;locus_tag=AB25_RS02800;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WP_000041970.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 76243 76788 . + . ID=gene-AB25_RS02795;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=AB25_RS02795;old_locus_tag=AB25_4774 NZ_JJMC01000078.1 Protein Homology CDS 76243 76788 . + 0 ID=cds-WP_001295188.1;Parent=gene-AB25_RS02795;Dbxref=GenBank:WP_001295188.1;Name=WP_001295188.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882950.1;locus_tag=AB25_RS02795;product=oligoribonuclease;protein_id=WP_001295188.1;transl_table=11 NZ_JJMC01000078.1 RefSeq gene 76801 77047 . - . ID=gene-AB25_RS32080;Name=AB25_RS32080;end_range=77047,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32080;partial=true NZ_JJMC01000078.1 GeneMarkS-2+ CDS 76801 77047 . - 1 ID=cds-WP_032262015.1;Parent=gene-AB25_RS32080;Dbxref=GenBank:WP_032262015.1;Name=WP_032262015.1;end_range=77047,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB25_RS32080;partial=true;product=hypothetical protein;protein_id=WP_032262015.1;transl_table=11 ##sequence-region NZ_JJMC01000079.1 1 117842 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000079.1 RefSeq region 1 117842 . + . ID=NZ_JJMC01000079.1:1..117842;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000079.1 RefSeq gene 1 665 . - . ID=gene-AB25_RS02790;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=AB25_RS02790;old_locus_tag=AB25_4776;partial=true;start_range=.,1 NZ_JJMC01000079.1 Protein Homology CDS 1 665 . - 0 ID=cds-WP_032296160.1;Parent=gene-AB25_RS02790;Dbxref=GenBank:WP_032296160.1;Name=WP_032296160.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418587.1;locus_tag=AB25_RS02790;partial=true;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_032296160.1;start_range=.,1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 664 2211 . + . ID=gene-AB25_RS02785;Name=nnr;gbkey=Gene;gene=nnr;gene_biotype=protein_coding;locus_tag=AB25_RS02785;old_locus_tag=AB25_4777 NZ_JJMC01000079.1 Protein Homology CDS 664 2211 . + 0 ID=cds-WP_001307537.1;Parent=gene-AB25_RS02785;Dbxref=GenBank:WP_001307537.1;Name=WP_001307537.1;Ontology_term=GO:0052855;gbkey=CDS;gene=nnr;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418588.1;locus_tag=AB25_RS02785;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=WP_001307537.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 2183 2644 . + . ID=gene-AB25_RS02780;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=AB25_RS02780;old_locus_tag=AB25_4778 NZ_JJMC01000079.1 Protein Homology CDS 2183 2644 . + 0 ID=cds-WP_000981977.1;Parent=gene-AB25_RS02780;Dbxref=GenBank:WP_000981977.1;Name=WP_000981977.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313171.1;locus_tag=AB25_RS02780;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_000981977.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 2663 3997 . + . ID=gene-AB25_RS02775;Name=amiB;gbkey=Gene;gene=amiB;gene_biotype=protein_coding;locus_tag=AB25_RS02775;old_locus_tag=AB25_4779 NZ_JJMC01000079.1 Protein Homology CDS 2663 3997 . + 0 ID=cds-WP_000990262.1;Parent=gene-AB25_RS02775;Dbxref=GenBank:WP_000990262.1;Name=WP_000990262.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiB;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418590.1;locus_tag=AB25_RS02775;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=WP_000990262.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 4007 5854 . + . ID=gene-AB25_RS02770;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=AB25_RS02770;old_locus_tag=AB25_4780 NZ_JJMC01000079.1 Protein Homology CDS 4007 5854 . + 0 ID=cds-WP_001122497.1;Parent=gene-AB25_RS02770;Dbxref=GenBank:WP_001122497.1;Name=WP_001122497.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418591.1;locus_tag=AB25_RS02770;product=DNA mismatch repair endonuclease MutL;protein_id=WP_001122497.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 5847 6797 . + . ID=gene-AB25_RS02765;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=AB25_RS02765;old_locus_tag=AB25_4781 NZ_JJMC01000079.1 Protein Homology CDS 5847 6797 . + 0 ID=cds-WP_001280345.1;Parent=gene-AB25_RS02765;Dbxref=GenBank:WP_001280345.1;Name=WP_001280345.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418592.1;locus_tag=AB25_RS02765;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_001280345.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 6883 7191 . + . ID=gene-AB25_RS02760;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=AB25_RS02760;old_locus_tag=AB25_4782 NZ_JJMC01000079.1 Protein Homology CDS 6883 7191 . + 0 ID=cds-WP_001051883.1;Parent=gene-AB25_RS02760;Dbxref=GenBank:WP_001051883.1;Name=WP_001051883.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313175.1;locus_tag=AB25_RS02760;product=RNA chaperone Hfq;protein_id=WP_001051883.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 7268 8548 . + . ID=gene-AB25_RS02755;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=AB25_RS02755;old_locus_tag=AB25_4783 NZ_JJMC01000079.1 Protein Homology CDS 7268 8548 . + 0 ID=cds-WP_000460360.1;Parent=gene-AB25_RS02755;Dbxref=GenBank:WP_000460360.1;Name=WP_000460360.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313176.1;locus_tag=AB25_RS02755;product=ribosome rescue GTPase HflX;protein_id=WP_000460360.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 8634 9893 . + . ID=gene-AB25_RS02750;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=AB25_RS02750;old_locus_tag=AB25_4784 NZ_JJMC01000079.1 Protein Homology CDS 8634 9893 . + 0 ID=cds-WP_000312488.1;Parent=gene-AB25_RS02750;Dbxref=GenBank:WP_000312488.1;Name=WP_000312488.1;Ontology_term=GO:0016020;gbkey=CDS;gene=hflK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313177.1;locus_tag=AB25_RS02750;product=FtsH protease activity modulator HflK;protein_id=WP_000312488.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 9896 10900 . + . ID=gene-AB25_RS02745;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=AB25_RS02745;old_locus_tag=AB25_4785 NZ_JJMC01000079.1 Protein Homology CDS 9896 10900 . + 0 ID=cds-WP_001232412.1;Parent=gene-AB25_RS02745;Dbxref=GenBank:WP_001232412.1;Name=WP_001232412.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313178.1;locus_tag=AB25_RS02745;product=protease modulator HflC;protein_id=WP_001232412.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 10982 11179 . + . ID=gene-AB25_RS02740;Name=yjeT;gbkey=Gene;gene=yjeT;gene_biotype=protein_coding;locus_tag=AB25_RS02740;old_locus_tag=AB25_4786 NZ_JJMC01000079.1 Protein Homology CDS 10982 11179 . + 0 ID=cds-WP_001089295.1;Parent=gene-AB25_RS02740;Dbxref=GenBank:WP_001089295.1;Name=WP_001089295.1;gbkey=CDS;gene=yjeT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313179.1;locus_tag=AB25_RS02740;product=DUF2065 domain-containing protein;protein_id=WP_001089295.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 11283 12581 . + . ID=gene-AB25_RS02735;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=AB25_RS02735;old_locus_tag=AB25_4787 NZ_JJMC01000079.1 Protein Homology CDS 11283 12581 . + 0 ID=cds-WP_000527955.1;Parent=gene-AB25_RS02735;Dbxref=GenBank:WP_000527955.1;Name=WP_000527955.1;Ontology_term=GO:0009152,GO:0004019;gbkey=CDS;gene=purA;go_function=adenylosuccinate synthase activity|0004019||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842885.1;locus_tag=AB25_RS02735;product=adenylosuccinate synthase;protein_id=WP_000527955.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 12786 13211 . + . ID=gene-AB25_RS02730;Name=nsrR;gbkey=Gene;gene=nsrR;gene_biotype=protein_coding;locus_tag=AB25_RS02730;old_locus_tag=AB25_4788 NZ_JJMC01000079.1 Protein Homology CDS 12786 13211 . + 0 ID=cds-WP_001177644.1;Parent=gene-AB25_RS02730;Dbxref=GenBank:WP_001177644.1;Name=WP_001177644.1;gbkey=CDS;gene=nsrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134424.1;locus_tag=AB25_RS02730;product=nitric oxide-sensing transcriptional repressor NsrR;protein_id=WP_001177644.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 13250 15691 . + . ID=gene-AB25_RS02725;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=AB25_RS02725;old_locus_tag=AB25_4789 NZ_JJMC01000079.1 Protein Homology CDS 13250 15691 . + 0 ID=cds-WP_000076316.1;Parent=gene-AB25_RS02725;Dbxref=GenBank:WP_000076316.1;Name=WP_000076316.1;Ontology_term=GO:0016070,GO:0004540;gbkey=CDS;gene=rnr;go_function=RNA nuclease activity|0004540||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418600.4;locus_tag=AB25_RS02725;product=ribonuclease R;protein_id=WP_000076316.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 15871 16602 . + . ID=gene-AB25_RS02720;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=AB25_RS02720;old_locus_tag=AB25_4790 NZ_JJMC01000079.1 Protein Homology CDS 15871 16602 . + 0 ID=cds-WP_001293282.1;Parent=gene-AB25_RS02720;Dbxref=GenBank:WP_001293282.1;Name=WP_001293282.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313183.1;locus_tag=AB25_RS02720;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_001293282.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 16729 17130 . + . ID=gene-AB25_RS02715;Name=yjfI;gbkey=Gene;gene=yjfI;gene_biotype=protein_coding;locus_tag=AB25_RS02715;old_locus_tag=AB25_4791 NZ_JJMC01000079.1 Protein Homology CDS 16729 17130 . + 0 ID=cds-WP_000220137.1;Parent=gene-AB25_RS02715;Dbxref=GenBank:WP_000220137.1;Name=WP_000220137.1;gbkey=CDS;gene=yjfI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313184.1;locus_tag=AB25_RS02715;product=YjfI family protein;protein_id=WP_000220137.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 17149 17847 . + . ID=gene-AB25_RS02710;Name=yjfJ;gbkey=Gene;gene=yjfJ;gene_biotype=protein_coding;locus_tag=AB25_RS02710;old_locus_tag=AB25_4792 NZ_JJMC01000079.1 Protein Homology CDS 17149 17847 . + 0 ID=cds-WP_000511955.1;Parent=gene-AB25_RS02710;Dbxref=GenBank:WP_000511955.1;Name=WP_000511955.1;gbkey=CDS;gene=yjfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418603.1;locus_tag=AB25_RS02710;product=PspA/IM30 family protein;protein_id=WP_000511955.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 17898 18557 . + . ID=gene-AB25_RS02705;Name=yjfK;gbkey=Gene;gene=yjfK;gene_biotype=protein_coding;locus_tag=AB25_RS02705;old_locus_tag=AB25_4793 NZ_JJMC01000079.1 Protein Homology CDS 17898 18557 . + 0 ID=cds-WP_000012553.1;Parent=gene-AB25_RS02705;Dbxref=GenBank:WP_000012553.1;Name=WP_000012553.1;gbkey=CDS;gene=yjfK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418604.1;locus_tag=AB25_RS02705;product=YjfK family protein;protein_id=WP_000012553.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 18575 18973 . + . ID=gene-AB25_RS02700;Name=yjfL;gbkey=Gene;gene=yjfL;gene_biotype=protein_coding;locus_tag=AB25_RS02700;old_locus_tag=AB25_4794 NZ_JJMC01000079.1 Protein Homology CDS 18575 18973 . + 0 ID=cds-WP_000547760.1;Parent=gene-AB25_RS02700;Dbxref=GenBank:WP_000547760.1;Name=WP_000547760.1;gbkey=CDS;gene=yjfL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313187.1;locus_tag=AB25_RS02700;product=DUF350 domain-containing protein;protein_id=WP_000547760.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 18983 19621 . + . ID=gene-AB25_RS02695;Name=yjfM;gbkey=Gene;gene=yjfM;gene_biotype=protein_coding;locus_tag=AB25_RS02695;old_locus_tag=AB25_4795 NZ_JJMC01000079.1 Protein Homology CDS 18983 19621 . + 0 ID=cds-WP_000101653.1;Parent=gene-AB25_RS02695;Dbxref=GenBank:WP_000101653.1;Name=WP_000101653.1;gbkey=CDS;gene=yjfM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313188.1;locus_tag=AB25_RS02695;product=DUF1190 domain-containing protein;protein_id=WP_000101653.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 19624 20787 . + . ID=gene-AB25_RS02690;Name=yjfC;gbkey=Gene;gene=yjfC;gene_biotype=protein_coding;locus_tag=AB25_RS02690;old_locus_tag=AB25_4796 NZ_JJMC01000079.1 Protein Homology CDS 19624 20787 . + 0 ID=cds-WP_000943987.1;Parent=gene-AB25_RS02690;Dbxref=GenBank:WP_000943987.1;Name=WP_000943987.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;gene=yjfC;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710049.2;locus_tag=AB25_RS02690;product=glutathionylspermidine synthase family protein;protein_id=WP_000943987.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 20871 22496 . + . ID=gene-AB25_RS02685;Name=aidB;gbkey=Gene;gene=aidB;gene_biotype=protein_coding;locus_tag=AB25_RS02685;old_locus_tag=AB25_4797 NZ_JJMC01000079.1 Protein Homology CDS 20871 22496 . + 0 ID=cds-WP_001339483.1;Parent=gene-AB25_RS02685;Dbxref=GenBank:WP_001339483.1;Name=WP_001339483.1;Ontology_term=GO:0003995;gbkey=CDS;gene=aidB;go_function=acyl-CoA dehydrogenase activity|0003995||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418608.6;locus_tag=AB25_RS02685;product=isovaleryl-CoA dehydrogenase;protein_id=WP_001339483.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 22613 22888 . - . ID=gene-AB25_RS02680;Name=yjfN;gbkey=Gene;gene=yjfN;gene_biotype=protein_coding;locus_tag=AB25_RS02680;old_locus_tag=AB25_4798 NZ_JJMC01000079.1 Protein Homology CDS 22613 22888 . - 0 ID=cds-WP_000811566.1;Parent=gene-AB25_RS02680;Dbxref=GenBank:WP_000811566.1;Name=WP_000811566.1;gbkey=CDS;gene=yjfN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418609.4;locus_tag=AB25_RS02680;product=DUF1471 family protease activator YjfN;protein_id=WP_000811566.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 23037 23366 . - . ID=gene-AB25_RS02675;Name=bsmA;gbkey=Gene;gene=bsmA;gene_biotype=protein_coding;locus_tag=AB25_RS02675;old_locus_tag=AB25_4799 NZ_JJMC01000079.1 Protein Homology CDS 23037 23366 . - 0 ID=cds-WP_000492885.1;Parent=gene-AB25_RS02675;Dbxref=GenBank:WP_000492885.1;Name=WP_000492885.1;gbkey=CDS;gene=bsmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313192.2;locus_tag=AB25_RS02675;product=biofilm peroxide resistance protein BsmA;protein_id=WP_000492885.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 23548 24297 . + . ID=gene-AB25_RS02670;Name=yjfP;gbkey=Gene;gene=yjfP;gene_biotype=protein_coding;locus_tag=AB25_RS02670;old_locus_tag=AB25_4800 NZ_JJMC01000079.1 Protein Homology CDS 23548 24297 . + 0 ID=cds-WP_000569705.1;Parent=gene-AB25_RS02670;Dbxref=GenBank:WP_000569705.1;Name=WP_000569705.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=yjfP;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418611.1;locus_tag=AB25_RS02670;product=esterase;protein_id=WP_000569705.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 24294 25049 . - . ID=gene-AB25_RS02665;Name=ulaR;gbkey=Gene;gene=ulaR;gene_biotype=protein_coding;locus_tag=AB25_RS02665;old_locus_tag=AB25_4801 NZ_JJMC01000079.1 Protein Homology CDS 24294 25049 . - 0 ID=cds-WP_000133631.1;Parent=gene-AB25_RS02665;Dbxref=GenBank:WP_000133631.1;Name=WP_000133631.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ulaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313194.1;locus_tag=AB25_RS02665;product=HTH-type transcriptional regulator UlaR;protein_id=WP_000133631.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 25157 26221 . - . ID=gene-AB25_RS02660;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=AB25_RS02660;old_locus_tag=AB25_4802 NZ_JJMC01000079.1 Protein Homology CDS 25157 26221 . - 0 ID=cds-WP_001295191.1;Parent=gene-AB25_RS02660;Dbxref=GenBank:WP_001295191.1;Name=WP_001295191.1;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856017.1;locus_tag=AB25_RS02660;product=L-ascorbate 6-phosphate lactonase;protein_id=WP_001295191.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 26576 27973 . + . ID=gene-AB25_RS02655;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;locus_tag=AB25_RS02655;old_locus_tag=AB25_4803 NZ_JJMC01000079.1 Protein Homology CDS 26576 27973 . + 0 ID=cds-WP_001296880.1;Parent=gene-AB25_RS02655;Dbxref=GenBank:WP_001296880.1;Name=WP_001296880.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418614.4;locus_tag=AB25_RS02655;product=PTS ascorbate transporter subunit IIC;protein_id=WP_001296880.1;transl_table=11 NZ_JJMC01000079.1 RefSeq pseudogene 27989 28285 . + . ID=gene-AB25_RS32085;Name=ulaB;end_range=28285,.;gbkey=Gene;gene=ulaB;gene_biotype=pseudogene;locus_tag=AB25_RS32085;partial=true;pseudo=true NZ_JJMC01000079.1 Protein Homology CDS 27989 28285 . + 0 ID=cds-AB25_RS32085;Parent=gene-AB25_RS32085;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=28285,.;gbkey=CDS;gene=ulaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313197.1;locus_tag=AB25_RS32085;partial=true;product=PTS ascorbate transporter subunit IIB;pseudo=true;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 28292 28756 . + . ID=gene-AB25_RS32090;Name=ulaC;gbkey=Gene;gene=ulaC;gene_biotype=protein_coding;locus_tag=AB25_RS32090;old_locus_tag=AB25_4804 NZ_JJMC01000079.1 Protein Homology CDS 28292 28756 . + 0 ID=cds-WP_000776505.1;Parent=gene-AB25_RS32090;Dbxref=GenBank:WP_000776505.1;Name=WP_000776505.1;gbkey=CDS;gene=ulaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710060.1;locus_tag=AB25_RS32090;product=PTS ascorbate transporter subunit IIA;protein_id=WP_000776505.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 28770 29420 . + . ID=gene-AB25_RS02645;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=AB25_RS02645;old_locus_tag=AB25_4805 NZ_JJMC01000079.1 Protein Homology CDS 28770 29420 . + 0 ID=cds-WP_000056760.1;Parent=gene-AB25_RS02645;Dbxref=GenBank:WP_000056760.1;Name=WP_000056760.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313199.1;locus_tag=AB25_RS02645;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_000056760.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 29430 30284 . + . ID=gene-AB25_RS02640;Name=ulaE;gbkey=Gene;gene=ulaE;gene_biotype=protein_coding;locus_tag=AB25_RS02640;old_locus_tag=AB25_4806 NZ_JJMC01000079.1 Protein Homology CDS 29430 30284 . + 0 ID=cds-WP_000949511.1;Parent=gene-AB25_RS02640;Dbxref=GenBank:WP_000949511.1;Name=WP_000949511.1;gbkey=CDS;gene=ulaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313200.1;locus_tag=AB25_RS02640;product=L-ribulose-5-phosphate 3-epimerase UlaE;protein_id=WP_000949511.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 30284 30970 . + . ID=gene-AB25_RS02635;Name=ulaF;gbkey=Gene;gene=ulaF;gene_biotype=protein_coding;locus_tag=AB25_RS02635;old_locus_tag=AB25_4807 NZ_JJMC01000079.1 Protein Homology CDS 30284 30970 . + 0 ID=cds-WP_001170828.1;Parent=gene-AB25_RS02635;Dbxref=GenBank:WP_001170828.1;Name=WP_001170828.1;gbkey=CDS;gene=ulaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313201.1;locus_tag=AB25_RS02635;product=L-ribulose-5-phosphate 4-epimerase UlaF;protein_id=WP_001170828.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 31099 31374 . - . ID=gene-AB25_RS02630;Name=yjfY;gbkey=Gene;gene=yjfY;gene_biotype=protein_coding;locus_tag=AB25_RS02630;old_locus_tag=AB25_4808 NZ_JJMC01000079.1 Protein Homology CDS 31099 31374 . - 0 ID=cds-WP_000492914.1;Parent=gene-AB25_RS02630;Dbxref=GenBank:WP_000492914.1;Name=WP_000492914.1;gbkey=CDS;gene=yjfY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313202.1;locus_tag=AB25_RS02630;product=DUF1471 family protein YjfY;protein_id=WP_000492914.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 31701 32096 . + . ID=gene-AB25_RS02625;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=AB25_RS02625;old_locus_tag=AB25_4809 NZ_JJMC01000079.1 Protein Homology CDS 31701 32096 . + 0 ID=cds-WP_001216676.1;Parent=gene-AB25_RS02625;Dbxref=GenBank:WP_001216676.1;Name=WP_001216676.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1;locus_tag=AB25_RS02625;product=30S ribosomal protein S6;protein_id=WP_001216676.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 32103 32417 . + . ID=gene-AB25_RS0126555;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=AB25_RS0126555 NZ_JJMC01000079.1 Protein Homology CDS 32103 32417 . + 0 ID=cds-WP_001347238.1;Parent=gene-AB25_RS0126555;Dbxref=GenBank:WP_001347238.1;Name=WP_001347238.1;Ontology_term=GO:0006260,GO:0003697,GO:0030894;gbkey=CDS;gene=priB;go_component=replisome|0030894||IEA;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313204.1;locus_tag=AB25_RS0126555;product=primosomal replication protein N;protein_id=WP_001347238.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 32422 32649 . + . ID=gene-AB25_RS02620;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=AB25_RS02620;old_locus_tag=AB25_4810 NZ_JJMC01000079.1 Protein Homology CDS 32422 32649 . + 0 ID=cds-WP_000135199.1;Parent=gene-AB25_RS02620;Dbxref=GenBank:WP_000135199.1;Name=WP_000135199.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=AB25_RS02620;product=30S ribosomal protein S18;protein_id=WP_000135199.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 32691 33140 . + . ID=gene-AB25_RS02615;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=AB25_RS02615;old_locus_tag=AB25_4811 NZ_JJMC01000079.1 Protein Homology CDS 32691 33140 . + 0 ID=cds-WP_001196062.1;Parent=gene-AB25_RS02615;Dbxref=GenBank:WP_001196062.1;Name=WP_001196062.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134442.1;locus_tag=AB25_RS02615;product=50S ribosomal protein L9;protein_id=WP_001196062.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 33252 34223 . - . ID=gene-AB25_RS02610;Name=AB25_RS02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS02610;old_locus_tag=AB25_4812 NZ_JJMC01000079.1 Protein Homology CDS 33252 34223 . - 0 ID=cds-WP_000695886.1;Parent=gene-AB25_RS02610;Dbxref=GenBank:WP_000695886.1;Name=WP_000695886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001422748.1;locus_tag=AB25_RS02610;product=TRAP transporter substrate-binding protein;protein_id=WP_000695886.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 34276 35577 . - . ID=gene-AB25_RS02605;Name=AB25_RS02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS02605;old_locus_tag=AB25_4813 NZ_JJMC01000079.1 Protein Homology CDS 34276 35577 . - 0 ID=cds-WP_000386846.1;Parent=gene-AB25_RS02605;Dbxref=GenBank:WP_000386846.1;Name=WP_000386846.1;Ontology_term=GO:0008643,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000386845.1;locus_tag=AB25_RS02605;product=TRAP transporter large permease;protein_id=WP_000386846.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 35620 36096 . - . ID=gene-AB25_RS02600;Name=AB25_RS02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS02600;old_locus_tag=AB25_4814 NZ_JJMC01000079.1 Protein Homology CDS 35620 36096 . - 0 ID=cds-WP_001244358.1;Parent=gene-AB25_RS02600;Dbxref=GenBank:WP_001244358.1;Name=WP_001244358.1;Ontology_term=GO:0015740,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012311688.1;locus_tag=AB25_RS02600;product=TRAP transporter small permease;protein_id=WP_001244358.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 36117 38198 . - . ID=gene-AB25_RS02595;Name=AB25_RS02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS02595;old_locus_tag=AB25_4815 NZ_JJMC01000079.1 Protein Homology CDS 36117 38198 . - 0 ID=cds-WP_000080339.1;Parent=gene-AB25_RS02595;Dbxref=GenBank:WP_000080339.1;Name=WP_000080339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005766390.1;locus_tag=AB25_RS02595;product=FAD-dependent oxidoreductase;protein_id=WP_000080339.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 38195 39736 . - . ID=gene-AB25_RS02590;Name=AB25_RS02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS02590;old_locus_tag=AB25_4816 NZ_JJMC01000079.1 Protein Homology CDS 38195 39736 . - 0 ID=cds-WP_001226944.1;Parent=gene-AB25_RS02590;Dbxref=GenBank:WP_001226944.1;Name=WP_001226944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001226973.1;locus_tag=AB25_RS02590;product=acyl CoA:acetate/3-ketoacid CoA transferase;protein_id=WP_001226944.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 39746 40522 . - . ID=gene-AB25_RS02585;Name=AB25_RS02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS02585;old_locus_tag=AB25_4817 NZ_JJMC01000079.1 Protein Homology CDS 39746 40522 . - 0 ID=cds-WP_001283566.1;Parent=gene-AB25_RS02585;Dbxref=GenBank:WP_001283566.1;Name=WP_001283566.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001283531.1;locus_tag=AB25_RS02585;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_001283566.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 40532 41374 . - . ID=gene-AB25_RS02580;Name=AB25_RS02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS02580;old_locus_tag=AB25_4818 NZ_JJMC01000079.1 Protein Homology CDS 40532 41374 . - 0 ID=cds-WP_001205226.1;Parent=gene-AB25_RS02580;Dbxref=GenBank:WP_001205226.1;Name=WP_001205226.1;Ontology_term=GO:0003824,GO:0016853;gbkey=CDS;go_function=catalytic activity|0003824||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001205218.1;locus_tag=AB25_RS02580;product=sugar phosphate isomerase/epimerase family protein;protein_id=WP_001205226.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 41384 42175 . - . ID=gene-AB25_RS02575;Name=AB25_RS02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS02575;old_locus_tag=AB25_4819 NZ_JJMC01000079.1 Protein Homology CDS 41384 42175 . - 0 ID=cds-WP_000843387.1;Parent=gene-AB25_RS02575;Dbxref=GenBank:WP_000843387.1;Name=WP_000843387.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709993.2;locus_tag=AB25_RS02575;product=3-ketoacyl-ACP reductase;protein_id=WP_000843387.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 42388 43035 . + . ID=gene-AB25_RS02570;Name=AB25_RS02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS02570;old_locus_tag=AB25_4820 NZ_JJMC01000079.1 Protein Homology CDS 42388 43035 . + 0 ID=cds-WP_001339486.1;Parent=gene-AB25_RS02570;Dbxref=GenBank:WP_001339486.1;Name=WP_001339486.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709992.3;locus_tag=AB25_RS02570;product=TetR/AcrR family transcriptional regulator;protein_id=WP_001339486.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 43019 43657 . - . ID=gene-AB25_RS02565;Name=ytfB;gbkey=Gene;gene=ytfB;gene_biotype=protein_coding;locus_tag=AB25_RS02565;old_locus_tag=AB25_4821 NZ_JJMC01000079.1 Protein Homology CDS 43019 43657 . - 0 ID=cds-WP_001119478.1;Parent=gene-AB25_RS02565;Dbxref=GenBank:WP_001119478.1;Name=WP_001119478.1;gbkey=CDS;gene=ytfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418627.4;locus_tag=AB25_RS02565;product=cell division protein YtfB;protein_id=WP_001119478.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 43876 44496 . + . ID=gene-AB25_RS02560;Name=fklB;gbkey=Gene;gene=fklB;gene_biotype=protein_coding;locus_tag=AB25_RS02560;old_locus_tag=AB25_4822 NZ_JJMC01000079.1 Protein Homology CDS 43876 44496 . + 0 ID=cds-WP_000211225.1;Parent=gene-AB25_RS02560;Dbxref=GenBank:WP_000211225.1;Name=WP_000211225.1;gbkey=CDS;gene=fklB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015742582.1;locus_tag=AB25_RS02560;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000211225.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 44805 46208 . + . ID=gene-AB25_RS02555;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=AB25_RS02555;old_locus_tag=AB25_4823 NZ_JJMC01000079.1 Protein Homology CDS 44805 46208 . + 0 ID=cds-WP_000228344.1;Parent=gene-AB25_RS02555;Dbxref=GenBank:WP_000228344.1;Name=WP_000228344.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=cycA;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001593878.1;locus_tag=AB25_RS02555;product=D-serine/D-alanine/glycine transporter;protein_id=WP_000228344.1;transl_table=11 NZ_JJMC01000079.1 RefSeq pseudogene 46475 46903 . + . ID=gene-AB25_RS02550;Name=AB25_RS02550;end_range=46903,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS02550;old_locus_tag=AB25_4824;partial=true;pseudo=true NZ_JJMC01000079.1 Protein Homology CDS 46475 46903 . + 0 ID=cds-AB25_RS02550;Parent=gene-AB25_RS02550;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=46903,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016246814.1;locus_tag=AB25_RS02550;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 47008 48075 . + . ID=gene-AB25_RS02545;Name=AB25_RS02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS02545;old_locus_tag=AB25_4825 NZ_JJMC01000079.1 Protein Homology CDS 47008 48075 . + 0 ID=cds-WP_001345317.1;Parent=gene-AB25_RS02545;Dbxref=GenBank:WP_001345317.1;Name=WP_001345317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001317586.1;locus_tag=AB25_RS02545;product=hypothetical protein;protein_id=WP_001345317.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 48322 48984 . - . ID=gene-AB25_RS02540;Name=ytfE;gbkey=Gene;gene=ytfE;gene_biotype=protein_coding;locus_tag=AB25_RS02540;old_locus_tag=AB25_4826 NZ_JJMC01000079.1 Protein Homology CDS 48322 48984 . - 0 ID=cds-WP_000331465.1;Parent=gene-AB25_RS02540;Dbxref=GenBank:WP_000331465.1;Name=WP_000331465.1;gbkey=CDS;gene=ytfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418630.1;locus_tag=AB25_RS02540;product=iron-sulfur cluster repair protein YtfE;protein_id=WP_000331465.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 49092 50057 . - . ID=gene-AB25_RS02535;Name=ytfF;gbkey=Gene;gene=ytfF;gene_biotype=protein_coding;locus_tag=AB25_RS02535;old_locus_tag=AB25_4827 NZ_JJMC01000079.1 Protein Homology CDS 49092 50057 . - 0 ID=cds-WP_001324314.1;Parent=gene-AB25_RS02535;Dbxref=GenBank:WP_001324314.1;Name=WP_001324314.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ytfF;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709987.2;locus_tag=AB25_RS02535;product=DMT family transporter;protein_id=WP_001324314.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 50165 51025 . - . ID=gene-AB25_RS02530;Name=qorB;gbkey=Gene;gene=qorB;gene_biotype=protein_coding;locus_tag=AB25_RS02530;old_locus_tag=AB25_4828 NZ_JJMC01000079.1 Protein Homology CDS 50165 51025 . - 0 ID=cds-WP_000560563.1;Parent=gene-AB25_RS02530;Dbxref=GenBank:WP_000560563.1;Name=WP_000560563.1;gbkey=CDS;gene=qorB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418632.1;locus_tag=AB25_RS02530;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_000560563.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 51114 51494 . + . ID=gene-AB25_RS02525;Name=ytfH;gbkey=Gene;gene=ytfH;gene_biotype=protein_coding;locus_tag=AB25_RS02525;old_locus_tag=AB25_4829 NZ_JJMC01000079.1 Protein Homology CDS 51114 51494 . + 0 ID=cds-WP_000084622.1;Parent=gene-AB25_RS02525;Dbxref=GenBank:WP_000084622.1;Name=WP_000084622.1;Ontology_term=GO:0003677;gbkey=CDS;gene=ytfH;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418633.4;locus_tag=AB25_RS02525;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_000084622.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 51623 53566 . - . ID=gene-AB25_RS02520;Name=cpdB;gbkey=Gene;gene=cpdB;gene_biotype=protein_coding;locus_tag=AB25_RS02520;old_locus_tag=AB25_4830 NZ_JJMC01000079.1 Protein Homology CDS 51623 53566 . - 0 ID=cds-WP_000589460.1;Parent=gene-AB25_RS02520;Dbxref=GenBank:WP_000589460.1;Name=WP_000589460.1;Ontology_term=GO:0009117,GO:0008663;gbkey=CDS;gene=cpdB;go_function=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418634.1;locus_tag=AB25_RS02520;product=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase;protein_id=WP_000589460.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 53756 54496 . + . ID=gene-AB25_RS02515;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=AB25_RS02515;old_locus_tag=AB25_4831 NZ_JJMC01000079.1 Protein Homology CDS 53756 54496 . + 0 ID=cds-WP_000886909.1;Parent=gene-AB25_RS02515;Dbxref=GenBank:WP_000886909.1;Name=WP_000886909.1;Ontology_term=GO:0000287,GO:0008441;gbkey=CDS;gene=cysQ;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313219.1;locus_tag=AB25_RS02515;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_000886909.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 54486 55043 . - . ID=gene-AB25_RS02510;Name=ytfJ;gbkey=Gene;gene=ytfJ;gene_biotype=protein_coding;locus_tag=AB25_RS02510;old_locus_tag=AB25_4832 NZ_JJMC01000079.1 Protein Homology CDS 54486 55043 . - 0 ID=cds-WP_000175286.1;Parent=gene-AB25_RS02510;Dbxref=GenBank:WP_000175286.1;Name=WP_000175286.1;gbkey=CDS;gene=ytfJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001498728.1;locus_tag=AB25_RS02510;product=YtfJ family protein;protein_id=WP_000175286.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 55368 55574 . + . ID=gene-AB25_RS02505;Name=ytfK;gbkey=Gene;gene=ytfK;gene_biotype=protein_coding;locus_tag=AB25_RS02505;old_locus_tag=AB25_4833 NZ_JJMC01000079.1 Protein Homology CDS 55368 55574 . + 0 ID=cds-WP_000689228.1;Parent=gene-AB25_RS02505;Dbxref=GenBank:WP_000689228.1;Name=WP_000689228.1;gbkey=CDS;gene=ytfK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966176.1;locus_tag=AB25_RS02505;product=DUF1107 domain-containing protein;protein_id=WP_000689228.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 55636 56979 . - . ID=gene-AB25_RS02500;Name=paeA;gbkey=Gene;gene=paeA;gene_biotype=protein_coding;locus_tag=AB25_RS02500;old_locus_tag=AB25_4834 NZ_JJMC01000079.1 Protein Homology CDS 55636 56979 . - 0 ID=cds-WP_000935042.1;Parent=gene-AB25_RS02500;Dbxref=GenBank:WP_000935042.1;Name=WP_000935042.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;gene=paeA;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709980.1;locus_tag=AB25_RS02500;product=hemolysin family protein;protein_id=WP_000935042.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 57302 57940 . - . ID=gene-AB25_RS02495;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=AB25_RS02495;old_locus_tag=AB25_4835 NZ_JJMC01000079.1 Protein Homology CDS 57302 57940 . - 0 ID=cds-WP_001295196.1;Parent=gene-AB25_RS02495;Dbxref=GenBank:WP_001295196.1;Name=WP_001295196.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418640.1;locus_tag=AB25_RS02495;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_001295196.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 58146 59879 . + . ID=gene-AB25_RS02485;Name=tamA;gbkey=Gene;gene=tamA;gene_biotype=protein_coding;locus_tag=AB25_RS02485;old_locus_tag=AB25_4837 NZ_JJMC01000079.1 Protein Homology CDS 58146 59879 . + 0 ID=cds-WP_001269327.1;Parent=gene-AB25_RS02485;Dbxref=GenBank:WP_001269327.1;Name=WP_001269327.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamA;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313225.1;locus_tag=AB25_RS02485;product=autotransporter assembly complex protein TamA;protein_id=WP_001269327.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 59876 63655 . + . ID=gene-AB25_RS02480;Name=tamB;gbkey=Gene;gene=tamB;gene_biotype=protein_coding;locus_tag=AB25_RS02480;old_locus_tag=AB25_4838 NZ_JJMC01000079.1 Protein Homology CDS 59876 63655 . + 0 ID=cds-WP_000060921.1;Parent=gene-AB25_RS02480;Dbxref=GenBank:WP_000060921.1;Name=WP_000060921.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamB;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709977.1;locus_tag=AB25_RS02480;product=autotransporter assembly complex protein TamB;protein_id=WP_000060921.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 63658 63999 . + . ID=gene-AB25_RS02475;Name=ytfP;gbkey=Gene;gene=ytfP;gene_biotype=protein_coding;locus_tag=AB25_RS02475;old_locus_tag=AB25_4839 NZ_JJMC01000079.1 Protein Homology CDS 63658 63999 . + 0 ID=cds-WP_001219160.1;Parent=gene-AB25_RS02475;Dbxref=GenBank:WP_001219160.1;Name=WP_001219160.1;Ontology_term=GO:0061929;gbkey=CDS;gene=ytfP;go_function=gamma-glutamylaminecyclotransferase activity|0061929||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313227.1;locus_tag=AB25_RS02475;product=gamma-glutamylcyclotransferase family protein;protein_id=WP_001219160.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 64211 64462 . + . ID=gene-AB25_RS02470;Name=chpS;gbkey=Gene;gene=chpS;gene_biotype=protein_coding;locus_tag=AB25_RS02470;old_locus_tag=AB25_4840 NZ_JJMC01000079.1 Protein Homology CDS 64211 64462 . + 0 ID=cds-WP_001223212.1;Parent=gene-AB25_RS02470;Dbxref=GenBank:WP_001223212.1;Name=WP_001223212.1;gbkey=CDS;gene=chpS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418645.2;locus_tag=AB25_RS02470;product=type II toxin-antitoxin system antitoxin ChpS;protein_id=WP_001223212.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 64456 64806 . + . ID=gene-AB25_RS02465;Name=chpB;gbkey=Gene;gene=chpB;gene_biotype=protein_coding;locus_tag=AB25_RS02465;old_locus_tag=AB25_4841 NZ_JJMC01000079.1 Protein Homology CDS 64456 64806 . + 0 ID=cds-WP_000239581.1;Parent=gene-AB25_RS02465;Dbxref=GenBank:WP_000239581.1;Name=WP_000239581.1;gbkey=CDS;gene=chpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418646.1;locus_tag=AB25_RS02465;product=endoribonuclease toxin ChpB;protein_id=WP_000239581.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 64885 65415 . - . ID=gene-AB25_RS02460;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=AB25_RS02460;old_locus_tag=AB25_4842 NZ_JJMC01000079.1 Protein Homology CDS 64885 65415 . - 0 ID=cds-WP_000055075.1;Parent=gene-AB25_RS02460;Dbxref=GenBank:WP_000055075.1;Name=WP_000055075.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739810.1;locus_tag=AB25_RS02460;product=inorganic diphosphatase;protein_id=WP_000055075.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 65725 66681 . + . ID=gene-AB25_RS02455;Name=ytfQ;gbkey=Gene;gene=ytfQ;gene_biotype=protein_coding;locus_tag=AB25_RS02455;old_locus_tag=AB25_4843 NZ_JJMC01000079.1 Protein Homology CDS 65725 66681 . + 0 ID=cds-WP_000265933.1;Parent=gene-AB25_RS02455;Dbxref=GenBank:WP_000265933.1;Name=WP_000265933.1;gbkey=CDS;gene=ytfQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313232.1;locus_tag=AB25_RS02455;product=galactofuranose ABC transporter substrate-binding protein YtfQ;protein_id=WP_000265933.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 66821 68323 . + . ID=gene-AB25_RS02450;Name=ytfR;gbkey=Gene;gene=ytfR;gene_biotype=protein_coding;locus_tag=AB25_RS02450;old_locus_tag=AB25_4844 NZ_JJMC01000079.1 Protein Homology CDS 66821 68323 . + 0 ID=cds-WP_032164091.1;Parent=gene-AB25_RS02450;Dbxref=GenBank:WP_032164091.1;Name=WP_032164091.1;Ontology_term=GO:0042875,GO:0103116;gbkey=CDS;gene=ytfR;go_function=ABC-type D-galactofuranose transporter|0103116||IEA;go_process=D-galactonate transmembrane transport|0042875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709973.1;locus_tag=AB25_RS02450;product=galactofuranose ABC transporter%2C ATP-binding protein YtfR;protein_id=WP_032164091.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 68337 69359 . + . ID=gene-AB25_RS02445;Name=ytfT;gbkey=Gene;gene=ytfT;gene_biotype=protein_coding;locus_tag=AB25_RS02445;old_locus_tag=AB25_4845 NZ_JJMC01000079.1 Protein Homology CDS 68337 69359 . + 0 ID=cds-WP_032164089.1;Parent=gene-AB25_RS02445;Dbxref=GenBank:WP_032164089.1;Name=WP_032164089.1;Ontology_term=GO:0042875,GO:0103116;gbkey=CDS;gene=ytfT;go_function=ABC-type D-galactofuranose transporter|0103116||IEA;go_process=D-galactonate transmembrane transport|0042875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313234.2;locus_tag=AB25_RS02445;product=galactofuranose ABC transporter%2C ATP-binding protein YtfT;protein_id=WP_032164089.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 69346 70341 . + . ID=gene-AB25_RS02440;Name=yjfF;gbkey=Gene;gene=yjfF;gene_biotype=protein_coding;locus_tag=AB25_RS02440;old_locus_tag=AB25_4846 NZ_JJMC01000079.1 Protein Homology CDS 69346 70341 . + 0 ID=cds-WP_000596021.1;Parent=gene-AB25_RS02440;Dbxref=GenBank:WP_000596021.1;Name=WP_000596021.1;Ontology_term=GO:0042875,GO:0103116,GO:0016020;gbkey=CDS;gene=yjfF;go_component=membrane|0016020||IEA;go_function=ABC-type D-galactofuranose transporter|0103116||IEA;go_process=D-galactonate transmembrane transport|0042875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313235.2;locus_tag=AB25_RS02440;product=galactofuranose ABC transporter%2C permease protein YjfF;protein_id=WP_000596021.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 70374 71372 . - . ID=gene-AB25_RS02435;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=AB25_RS02435;old_locus_tag=AB25_4847 NZ_JJMC01000079.1 Protein Homology CDS 70374 71372 . - 0 ID=cds-WP_000853753.1;Parent=gene-AB25_RS02435;Dbxref=GenBank:WP_000853753.1;Name=WP_000853753.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;gene=fbp;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233757.1;locus_tag=AB25_RS02435;product=class 1 fructose-bisphosphatase;protein_id=WP_000853753.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 71548 72921 . + . ID=gene-AB25_RS02430;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=AB25_RS02430;old_locus_tag=AB25_4849 NZ_JJMC01000079.1 Protein Homology CDS 71548 72921 . + 0 ID=cds-WP_001219792.1;Parent=gene-AB25_RS02430;Dbxref=GenBank:WP_001219792.1;Name=WP_001219792.1;Ontology_term=GO:0009252,GO:0071555,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313237.1;locus_tag=AB25_RS02430;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_001219792.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 73077 73628 . - . ID=gene-AB25_RS02425;Name=yjgA;gbkey=Gene;gene=yjgA;gene_biotype=protein_coding;locus_tag=AB25_RS02425;old_locus_tag=AB25_4850 NZ_JJMC01000079.1 Protein Homology CDS 73077 73628 . - 0 ID=cds-WP_000166270.1;Parent=gene-AB25_RS02425;Dbxref=GenBank:WP_000166270.1;Name=WP_000166270.1;Ontology_term=GO:0042254;gbkey=CDS;gene=yjgA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313238.1;locus_tag=AB25_RS02425;product=ribosome biogenesis factor YjgA;protein_id=WP_000166270.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 73723 75075 . + . ID=gene-AB25_RS02420;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=AB25_RS02420;old_locus_tag=AB25_4851 NZ_JJMC01000079.1 Protein Homology CDS 73723 75075 . + 0 ID=cds-WP_001162171.1;Parent=gene-AB25_RS02420;Dbxref=GenBank:WP_001162171.1;Name=WP_001162171.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313239.1;locus_tag=AB25_RS02420;product=metalloprotease PmbA;protein_id=WP_001162171.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 75258 75644 . + . ID=gene-AB25_RS02415;Name=cybC;gbkey=Gene;gene=cybC;gene_biotype=protein_coding;locus_tag=AB25_RS02415;old_locus_tag=AB25_4853 NZ_JJMC01000079.1 Protein Homology CDS 75258 75644 . + 0 ID=cds-WP_032164088.1;Parent=gene-AB25_RS02415;Dbxref=GenBank:WP_032164088.1;Name=WP_032164088.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0042597;gbkey=CDS;gene=cybC;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313240.2;locus_tag=AB25_RS02415;product=cytochrome b562;protein_id=WP_032164088.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 75689 76153 . - . ID=gene-AB25_RS02410;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=AB25_RS02410;old_locus_tag=AB25_4854 NZ_JJMC01000079.1 Protein Homology CDS 75689 76153 . - 0 ID=cds-WP_001106226.1;Parent=gene-AB25_RS02410;Dbxref=GenBank:WP_001106226.1;Name=WP_001106226.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313241.1;locus_tag=AB25_RS02410;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=WP_001106226.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 76311 78449 . - . ID=gene-AB25_RS02405;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=AB25_RS02405;old_locus_tag=AB25_4855 NZ_JJMC01000079.1 Protein Homology CDS 76311 78449 . - 0 ID=cds-WP_000187791.1;Parent=gene-AB25_RS02405;Dbxref=GenBank:WP_000187791.1;Name=WP_000187791.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase (thioredoxin) activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418659.1;locus_tag=AB25_RS02405;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_000187791.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 78843 80498 . - . ID=gene-AB25_RS02400;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=AB25_RS02400;old_locus_tag=AB25_4857 NZ_JJMC01000079.1 Protein Homology CDS 78843 80498 . - 0 ID=cds-WP_001301172.1;Parent=gene-AB25_RS02400;Dbxref=GenBank:WP_001301172.1;Name=WP_001301172.1;Ontology_term=GO:0005991,GO:0008788,GO:0005737;gbkey=CDS;gene=treC;go_component=cytoplasm|0005737||IEA;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709962.2;locus_tag=AB25_RS02400;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_001301172.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 80548 81969 . - . ID=gene-AB25_RS02395;Name=treB;gbkey=Gene;gene=treB;gene_biotype=protein_coding;locus_tag=AB25_RS02395;old_locus_tag=AB25_4858 NZ_JJMC01000079.1 Protein Homology CDS 80548 81969 . - 0 ID=cds-WP_077754710.1;Parent=gene-AB25_RS02395;Dbxref=GenBank:WP_077754710.1;Name=WP_077754710.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treB;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313244.1;locus_tag=AB25_RS02395;product=PTS trehalose transporter subunit IIBC;protein_id=WP_077754710.1;transl_table=11 NZ_JJMC01000079.1 RefSeq pseudogene 82088 83038 . - . ID=gene-AB25_RS02390;Name=treR;end_range=83038,.;gbkey=Gene;gene=treR;gene_biotype=pseudogene;locus_tag=AB25_RS02390;old_locus_tag=AB25_4859;partial=true;pseudo=true NZ_JJMC01000079.1 Protein Homology CDS 82088 83038 . - 0 ID=cds-AB25_RS02390;Parent=gene-AB25_RS02390;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005991,GO:0006355,GO:0045892,GO:0003677;end_range=83038,.;gbkey=CDS;gene=treR;go_function=DNA binding|0003677||IEA;go_process=trehalose metabolic process|0005991||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418662.1;locus_tag=AB25_RS02390;partial=true;product=trehalose operon repressor TreR;pseudo=true;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 83220 83273 . + . ID=gene-AB25_RS31435;Name=mgtL;gbkey=Gene;gene=mgtL;gene_biotype=protein_coding;locus_tag=AB25_RS31435 NZ_JJMC01000079.1 Protein Homology CDS 83220 83273 . + 0 ID=cds-WP_001387276.1;Parent=gene-AB25_RS31435;Dbxref=GenBank:WP_001387276.1;Name=WP_001387276.1;gbkey=CDS;gene=mgtL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003933616.1;locus_tag=AB25_RS31435;product=mgtA regulatory leader peptide MgtL;protein_id=WP_001387276.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 83414 86110 . + . ID=gene-AB25_RS02385;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=AB25_RS02385;old_locus_tag=AB25_4860 NZ_JJMC01000079.1 Protein Homology CDS 83414 86110 . + 0 ID=cds-WP_032171587.1;Parent=gene-AB25_RS02385;Dbxref=GenBank:WP_032171587.1;Name=WP_032171587.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313246.1;locus_tag=AB25_RS02385;product=magnesium-translocating P-type ATPase;protein_id=WP_032171587.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 86316 86702 . - . ID=gene-AB25_RS02380;Name=ridA;gbkey=Gene;gene=ridA;gene_biotype=protein_coding;locus_tag=AB25_RS02380;old_locus_tag=AB25_4861 NZ_JJMC01000079.1 Protein Homology CDS 86316 86702 . - 0 ID=cds-WP_000047539.1;Parent=gene-AB25_RS02380;Dbxref=GenBank:WP_000047539.1;Name=WP_000047539.1;gbkey=CDS;gene=ridA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418664.2;locus_tag=AB25_RS02380;product=2-iminobutanoate/2-iminopropanoate deaminase;protein_id=WP_000047539.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 86775 87236 . - . ID=gene-AB25_RS02375;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=AB25_RS02375;old_locus_tag=AB25_4862 NZ_JJMC01000079.1 Protein Homology CDS 86775 87236 . - 0 ID=cds-WP_000148581.1;Parent=gene-AB25_RS02375;Dbxref=GenBank:WP_000148581.1;Name=WP_000148581.1;Ontology_term=GO:0006207,GO:0009347;gbkey=CDS;gene=pyrI;go_component=aspartate carbamoyltransferase complex|0009347||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000148566.1;locus_tag=AB25_RS02375;product=aspartate carbamoyltransferase regulatory subunit;protein_id=WP_000148581.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 87249 88184 . - . ID=gene-AB25_RS02370;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=AB25_RS02370;old_locus_tag=AB25_4863 NZ_JJMC01000079.1 Protein Homology CDS 87249 88184 . - 0 ID=cds-WP_000013046.1;Parent=gene-AB25_RS02370;Dbxref=GenBank:WP_000013046.1;Name=WP_000013046.1;Ontology_term=GO:0006207,GO:0004070;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313249.1;locus_tag=AB25_RS02370;product=aspartate carbamoyltransferase;protein_id=WP_000013046.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 88188 88322 . - . ID=gene-AB25_RS0126560;Name=pyrL;gbkey=Gene;gene=pyrL;gene_biotype=protein_coding;locus_tag=AB25_RS0126560 NZ_JJMC01000079.1 Protein Homology CDS 88188 88322 . - 0 ID=cds-WP_001296693.1;Parent=gene-AB25_RS0126560;Dbxref=GenBank:WP_001296693.1;Name=WP_001296693.1;gbkey=CDS;gene=pyrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313250.1;locus_tag=AB25_RS0126560;product=pyr operon leader peptide;protein_id=WP_001296693.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 88603 88998 . - . ID=gene-AB25_RS02365;Name=yjgH;gbkey=Gene;gene=yjgH;gene_biotype=protein_coding;locus_tag=AB25_RS02365;old_locus_tag=AB25_4865 NZ_JJMC01000079.1 Protein Homology CDS 88603 88998 . - 0 ID=cds-WP_000230281.1;Parent=gene-AB25_RS02365;Dbxref=GenBank:WP_000230281.1;Name=WP_000230281.1;gbkey=CDS;gene=yjgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418669.1;locus_tag=AB25_RS02365;product=RidA family protein;protein_id=WP_000230281.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 89129 89842 . - . ID=gene-AB25_RS02360;Name=bdcA;gbkey=Gene;gene=bdcA;gene_biotype=protein_coding;locus_tag=AB25_RS02360;old_locus_tag=AB25_4866 NZ_JJMC01000079.1 Protein Homology CDS 89129 89842 . - 0 ID=cds-WP_000500687.1;Parent=gene-AB25_RS02360;Dbxref=GenBank:WP_000500687.1;Name=WP_000500687.1;Ontology_term=GO:0016491;gbkey=CDS;gene=bdcA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313253.1;locus_tag=AB25_RS02360;product=SDR family oxidoreductase;protein_id=WP_000500687.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 89913 90506 . + . ID=gene-AB25_RS02355;Name=bdcR;gbkey=Gene;gene=bdcR;gene_biotype=protein_coding;locus_tag=AB25_RS02355;old_locus_tag=AB25_4867 NZ_JJMC01000079.1 Protein Homology CDS 89913 90506 . + 0 ID=cds-WP_032171589.1;Parent=gene-AB25_RS02355;Dbxref=GenBank:WP_032171589.1;Name=WP_032171589.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=bdcR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709951.3;locus_tag=AB25_RS02355;product=TetR/AcrR family transcriptional regulator;protein_id=WP_032171589.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 90651 91103 . + . ID=gene-AB25_RS02350;Name=tabA;gbkey=Gene;gene=tabA;gene_biotype=protein_coding;locus_tag=AB25_RS02350;old_locus_tag=AB25_4868 NZ_JJMC01000079.1 Protein Homology CDS 90651 91103 . + 0 ID=cds-WP_001326836.1;Parent=gene-AB25_RS02350;Dbxref=GenBank:WP_001326836.1;Name=WP_001326836.1;gbkey=CDS;gene=tabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313256.2;locus_tag=AB25_RS02350;product=toxin-antitoxin biofilm protein TabA;protein_id=WP_001326836.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 91226 92821 . + . ID=gene-AB25_RS02345;Name=AB25_RS02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS02345;old_locus_tag=AB25_4869 NZ_JJMC01000079.1 Protein Homology CDS 91226 92821 . + 0 ID=cds-WP_032171591.1;Parent=gene-AB25_RS02345;Dbxref=GenBank:WP_032171591.1;Name=WP_032171591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001600920.1;locus_tag=AB25_RS02345;product=hypothetical protein;protein_id=WP_032171591.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 92877 93881 . - . ID=gene-AB25_RS02340;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=AB25_RS02340;old_locus_tag=AB25_4870 NZ_JJMC01000079.1 Protein Homology CDS 92877 93881 . - 0 ID=cds-WP_000012907.1;Parent=gene-AB25_RS02340;Dbxref=GenBank:WP_000012907.1;Name=WP_000012907.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313258.1;locus_tag=AB25_RS02340;product=ornithine carbamoyltransferase;protein_id=WP_000012907.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 94043 94459 . + . ID=gene-AB25_RS02335;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=AB25_RS02335;old_locus_tag=AB25_4871 NZ_JJMC01000079.1 Protein Homology CDS 94043 94459 . + 0 ID=cds-WP_000002953.1;Parent=gene-AB25_RS02335;Dbxref=GenBank:WP_000002953.1;Name=WP_000002953.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313259.1;locus_tag=AB25_RS02335;product=ribonuclease E inhibitor RraB;protein_id=WP_000002953.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 94505 95008 . - . ID=gene-AB25_RS02330;Name=yjgM;gbkey=Gene;gene=yjgM;gene_biotype=protein_coding;locus_tag=AB25_RS02330;old_locus_tag=AB25_4872 NZ_JJMC01000079.1 Protein Homology CDS 94505 95008 . - 0 ID=cds-WP_001059412.1;Parent=gene-AB25_RS02330;Dbxref=GenBank:WP_001059412.1;Name=WP_001059412.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;gene=yjgM;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026287.1;locus_tag=AB25_RS02330;product=GNAT family N-acetyltransferase;protein_id=WP_001059412.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 95201 96397 . + . ID=gene-AB25_RS02325;Name=yjgN;gbkey=Gene;gene=yjgN;gene_biotype=protein_coding;locus_tag=AB25_RS02325;old_locus_tag=AB25_4873 NZ_JJMC01000079.1 Protein Homology CDS 95201 96397 . + 0 ID=cds-WP_000079655.1;Parent=gene-AB25_RS02325;Dbxref=GenBank:WP_000079655.1;Name=WP_000079655.1;gbkey=CDS;gene=yjgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709944.2;locus_tag=AB25_RS02325;product=YjgN family protein;protein_id=WP_000079655.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 96453 99308 . - . ID=gene-AB25_RS02320;Name=valS;gbkey=Gene;gene=valS;gene_biotype=protein_coding;locus_tag=AB25_RS02320;old_locus_tag=AB25_4874 NZ_JJMC01000079.1 Protein Homology CDS 96453 99308 . - 0 ID=cds-WP_032173590.1;Parent=gene-AB25_RS02320;Dbxref=GenBank:WP_032173590.1;Name=WP_032173590.1;Ontology_term=GO:0006438,GO:0000166,GO:0004832,GO:0005524;gbkey=CDS;gene=valS;go_function=nucleotide binding|0000166||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=AB25_RS02320;product=valine--tRNA ligase;protein_id=WP_032173590.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 99308 99751 . - . ID=gene-AB25_RS02315;Name=holC;gbkey=Gene;gene=holC;gene_biotype=protein_coding;locus_tag=AB25_RS02315;old_locus_tag=AB25_4875 NZ_JJMC01000079.1 Protein Homology CDS 99308 99751 . - 0 ID=cds-WP_000786399.1;Parent=gene-AB25_RS02315;Dbxref=GenBank:WP_000786399.1;Name=WP_000786399.1;gbkey=CDS;gene=holC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098129.1;locus_tag=AB25_RS02315;product=DNA polymerase III subunit chi;protein_id=WP_000786399.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 100105 101616 . - . ID=gene-AB25_RS02310;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=AB25_RS02310;old_locus_tag=AB25_4876 NZ_JJMC01000079.1 Protein Homology CDS 100105 101616 . - 0 ID=cds-WP_000397144.1;Parent=gene-AB25_RS02310;Dbxref=GenBank:WP_000397144.1;Name=WP_000397144.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepA;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313264.1;locus_tag=AB25_RS02310;product=leucyl aminopeptidase;protein_id=WP_000397144.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 101770 101820 . + . ID=gene-AB25_RS32330;Name=ytgA;gbkey=Gene;gene=ytgA;gene_biotype=protein_coding;locus_tag=AB25_RS32330 NZ_JJMC01000079.1 Protein Homology CDS 101770 101820 . + 0 ID=cds-WP_211180521.1;Parent=gene-AB25_RS32330;Dbxref=GenBank:WP_211180521.1;Name=WP_211180521.1;gbkey=CDS;gene=ytgA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051214.1;locus_tag=AB25_RS32330;product=protein YtgA;protein_id=WP_211180521.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 101883 102983 . + . ID=gene-AB25_RS02305;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=AB25_RS02305;old_locus_tag=AB25_4878 NZ_JJMC01000079.1 Protein Homology CDS 101883 102983 . + 0 ID=cds-WP_000584114.1;Parent=gene-AB25_RS02305;Dbxref=GenBank:WP_000584114.1;Name=WP_000584114.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313265.1;locus_tag=AB25_RS02305;product=LPS export ABC transporter permease LptF;protein_id=WP_000584114.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 102983 104065 . + . ID=gene-AB25_RS02300;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=AB25_RS02300;old_locus_tag=AB25_4879 NZ_JJMC01000079.1 Protein Homology CDS 102983 104065 . + 0 ID=cds-WP_001295681.1;Parent=gene-AB25_RS02300;Dbxref=GenBank:WP_001295681.1;Name=WP_001295681.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313266.2;locus_tag=AB25_RS02300;product=LPS export ABC transporter permease LptG;protein_id=WP_001295681.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 104226 105728 . - . ID=gene-AB25_RS02295;Name=yjgR;gbkey=Gene;gene=yjgR;gene_biotype=protein_coding;locus_tag=AB25_RS02295;old_locus_tag=AB25_4880 NZ_JJMC01000079.1 Protein Homology CDS 104226 105728 . - 0 ID=cds-WP_001294573.1;Parent=gene-AB25_RS02295;Dbxref=GenBank:WP_001294573.1;Name=WP_001294573.1;Ontology_term=GO:0005524;gbkey=CDS;gene=yjgR;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418684.1;locus_tag=AB25_RS02295;product=helicase HerA-like C-terminal domain-containing protein;protein_id=WP_001294573.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 105806 106804 . - . ID=gene-AB25_RS02290;Name=idnR;gbkey=Gene;gene=idnR;gene_biotype=protein_coding;gene_synonym=gntH,yjgS;locus_tag=AB25_RS02290;old_locus_tag=AB25_4881 NZ_JJMC01000079.1 Protein Homology CDS 105806 106804 . - 0 ID=cds-WP_001309159.1;Parent=gene-AB25_RS02290;Dbxref=GenBank:WP_001309159.1;Name=WP_001309159.1;Ontology_term=GO:0006355,GO:0019521,GO:0003700;gbkey=CDS;gene=idnR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,D-gluconate metabolic process|0019521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418685.1;locus_tag=AB25_RS02290;product=DNA-binding transcriptional regulator IdnR;protein_id=WP_001309159.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 106871 108190 . - . ID=gene-AB25_RS02285;Name=idnT;gbkey=Gene;gene=idnT;gene_biotype=protein_coding;locus_tag=AB25_RS02285;old_locus_tag=AB25_4882 NZ_JJMC01000079.1 Protein Homology CDS 106871 108190 . - 0 ID=cds-WP_001128347.1;Parent=gene-AB25_RS02285;Dbxref=GenBank:WP_001128347.1;Name=WP_001128347.1;gbkey=CDS;gene=idnT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418686.1;locus_tag=AB25_RS02285;product=gnt-II system L-idonate transporter;protein_id=WP_001128347.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 108253 109017 . - . ID=gene-AB25_RS02280;Name=idnO;gbkey=Gene;gene=idnO;gene_biotype=protein_coding;locus_tag=AB25_RS02280;old_locus_tag=AB25_4883 NZ_JJMC01000079.1 Protein Homology CDS 108253 109017 . - 0 ID=cds-WP_000998695.1;Parent=gene-AB25_RS02280;Dbxref=GenBank:WP_000998695.1;Name=WP_000998695.1;gbkey=CDS;gene=idnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418687.1;locus_tag=AB25_RS02280;product=gluconate 5-dehydrogenase;protein_id=WP_000998695.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 109041 110072 . - . ID=gene-AB25_RS02275;Name=idnD;gbkey=Gene;gene=idnD;gene_biotype=protein_coding;locus_tag=AB25_RS02275;old_locus_tag=AB25_4884 NZ_JJMC01000079.1 Protein Homology CDS 109041 110072 . - 0 ID=cds-WP_001197411.1;Parent=gene-AB25_RS02275;Dbxref=GenBank:WP_001197411.1;Name=WP_001197411.1;gbkey=CDS;gene=idnD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418688.1;locus_tag=AB25_RS02275;product=L-idonate 5-dehydrogenase;protein_id=WP_001197411.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 110289 110852 . + . ID=gene-AB25_RS02270;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=AB25_RS02270;old_locus_tag=AB25_4885 NZ_JJMC01000079.1 Protein Homology CDS 110289 110852 . + 0 ID=cds-WP_000896738.1;Parent=gene-AB25_RS02270;Dbxref=GenBank:WP_000896738.1;Name=WP_000896738.1;gbkey=CDS;gene=idnK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418689.1;locus_tag=AB25_RS02270;product=gluconokinase;protein_id=WP_000896738.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 110856 111875 . - . ID=gene-AB25_RS02265;Name=ahr;gbkey=Gene;gene=ahr;gene_biotype=protein_coding;locus_tag=AB25_RS02265;old_locus_tag=AB25_4886 NZ_JJMC01000079.1 Protein Homology CDS 110856 111875 . - 0 ID=cds-WP_001318460.1;Parent=gene-AB25_RS02265;Dbxref=GenBank:WP_001318460.1;Name=WP_001318460.1;Ontology_term=GO:0006631,GO:0008106,GO:0016616;gbkey=CDS;gene=ahr;go_function=alcohol dehydrogenase (NADP+) activity|0008106||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418690.4;locus_tag=AB25_RS02265;product=NADPH-dependent aldehyde reductase Ahr;protein_id=WP_001318460.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 112071 112155 . + . ID=gene-AB25_RS02260;Name=AB25_RS02260;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS02260;old_locus_tag=AB25_4887 NZ_JJMC01000079.1 tRNAscan-SE tRNA 112071 112155 . + . ID=rna-AB25_RS02260;Parent=gene-AB25_RS02260;anticodon=(pos:112105..112107);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS02260;product=tRNA-Leu NZ_JJMC01000079.1 tRNAscan-SE exon 112071 112155 . + . ID=exon-AB25_RS02260-1;Parent=rna-AB25_RS02260;anticodon=(pos:112105..112107);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS02260;product=tRNA-Leu NZ_JJMC01000079.1 RefSeq gene 112398 113606 . + . ID=gene-AB25_RS02255;Name=AB25_RS02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS02255;old_locus_tag=AB25_4888 NZ_JJMC01000079.1 Protein Homology CDS 112398 113606 . + 0 ID=cds-WP_223362169.1;Parent=gene-AB25_RS02255;Dbxref=GenBank:WP_223362169.1;Name=WP_223362169.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001642584.1;locus_tag=AB25_RS02255;product=tyrosine-type recombinase/integrase;protein_id=WP_223362169.1;transl_table=11 NZ_JJMC01000079.1 RefSeq pseudogene 113923 115106 . - . ID=gene-AB25_RS27250;Name=AB25_RS27250;end_range=115106,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS27250;partial=true;pseudo=true NZ_JJMC01000079.1 Protein Homology CDS 113923 115106 . - 0 ID=cds-AB25_RS27250;Parent=gene-AB25_RS27250;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009244,GO:1900727,GO:0016776;end_range=115106,.;gbkey=CDS;go_function=phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA,osmoregulated periplasmic glucan biosynthetic process|1900727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001535067.1;locus_tag=AB25_RS27250;partial=true;product=phosphoethanolamine transferase;pseudo=true;transl_table=11 NZ_JJMC01000079.1 RefSeq pseudogene 115690 115919 . + . ID=gene-AB25_RS29365;Name=AB25_RS29365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS29365;partial=true;pseudo=true;start_range=.,115690 NZ_JJMC01000079.1 Protein Homology CDS 115690 115919 . + 0 ID=cds-AB25_RS29365;Parent=gene-AB25_RS29365;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354984.1;locus_tag=AB25_RS29365;partial=true;product=transposase domain-containing protein;pseudo=true;start_range=.,115690;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 116262 116405 . + . ID=gene-AB25_RS02235;Name=AB25_RS02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS02235;old_locus_tag=AB25_4893 NZ_JJMC01000079.1 GeneMarkS-2+ CDS 116262 116405 . + 0 ID=cds-WP_000050905.1;Parent=gene-AB25_RS02235;Dbxref=GenBank:WP_000050905.1;Name=WP_000050905.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB25_RS02235;product=hypothetical protein;protein_id=WP_000050905.1;transl_table=11 NZ_JJMC01000079.1 RefSeq gene 116433 117779 . - . ID=gene-AB25_RS02230;Name=insG;gbkey=Gene;gene=insG;gene_biotype=protein_coding;locus_tag=AB25_RS02230;old_locus_tag=AB25_4894 NZ_JJMC01000079.1 Protein Homology CDS 116433 117779 . - 0 ID=cds-WP_000483767.1-3;Parent=gene-AB25_RS02230;Dbxref=GenBank:WP_000483767.1;Name=WP_000483767.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=insG;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707145.1;locus_tag=AB25_RS02230;product=IS4-like element IS4 family transposase;protein_id=WP_000483767.1;transl_table=11 ##sequence-region NZ_JJMC01000080.1 1 28855 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000080.1 RefSeq region 1 28855 . + . ID=NZ_JJMC01000080.1:1..28855;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000080.1 RefSeq pseudogene 155 253 . + . ID=gene-AB25_RS29370;Name=AB25_RS29370;end_range=253,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS29370;partial=true;pseudo=true NZ_JJMC01000080.1 Protein Homology CDS 155 253 . + 0 ID=cds-AB25_RS29370;Parent=gene-AB25_RS29370;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=253,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309433.1;locus_tag=AB25_RS29370;partial=true;product=TA system toxin CbtA family protein;pseudo=true;transl_table=11 NZ_JJMC01000080.1 RefSeq gene 993 2252 . + . ID=gene-AB25_RS02225;Name=mtnK;gbkey=Gene;gene=mtnK;gene_biotype=protein_coding;locus_tag=AB25_RS02225;old_locus_tag=AB25_4895 NZ_JJMC01000080.1 Protein Homology CDS 993 2252 . + 0 ID=cds-WP_000132327.1;Parent=gene-AB25_RS02225;Dbxref=GenBank:WP_000132327.1;Name=WP_000132327.1;Ontology_term=GO:0009086,GO:0046522;gbkey=CDS;gene=mtnK;go_function=S-methyl-5-thioribose kinase activity|0046522||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000132329.1;locus_tag=AB25_RS02225;product=S-methyl-5-thioribose kinase;protein_id=WP_000132327.1;transl_table=11 NZ_JJMC01000080.1 RefSeq gene 2262 3377 . + . ID=gene-AB25_RS02220;Name=mtnA;gbkey=Gene;gene=mtnA;gene_biotype=protein_coding;locus_tag=AB25_RS02220;old_locus_tag=AB25_4896 NZ_JJMC01000080.1 Protein Homology CDS 2262 3377 . + 0 ID=cds-WP_032171608.1;Parent=gene-AB25_RS02220;Dbxref=GenBank:WP_032171608.1;Name=WP_032171608.1;Ontology_term=GO:0019509,GO:0046523;gbkey=CDS;gene=mtnA;go_function=S-methyl-5-thioribose-1-phosphate isomerase activity|0046523||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001022014.1;locus_tag=AB25_RS02220;product=S-methyl-5-thioribose-1-phosphate isomerase;protein_id=WP_032171608.1;transl_table=11 NZ_JJMC01000080.1 RefSeq gene 3408 4049 . + . ID=gene-AB25_RS02215;Name=AB25_RS02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS02215;old_locus_tag=AB25_4897 NZ_JJMC01000080.1 Protein Homology CDS 3408 4049 . + 0 ID=cds-WP_000439687.1;Parent=gene-AB25_RS02215;Dbxref=GenBank:WP_000439687.1;Name=WP_000439687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000439687.1;locus_tag=AB25_RS02215;product=L-fuculose-phosphate aldolase;protein_id=WP_000439687.1;transl_table=11 NZ_JJMC01000080.1 RefSeq gene 4153 5157 . + . ID=gene-AB25_RS02210;Name=AB25_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS02210;old_locus_tag=AB25_4898 NZ_JJMC01000080.1 Protein Homology CDS 4153 5157 . + 0 ID=cds-WP_000471147.1;Parent=gene-AB25_RS02210;Dbxref=GenBank:WP_000471147.1;Name=WP_000471147.1;Ontology_term=GO:0034219,GO:0015144,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001622580.1;locus_tag=AB25_RS02210;product=GRP family sugar transporter;protein_id=WP_000471147.1;transl_table=11 NZ_JJMC01000080.1 RefSeq gene 5198 6184 . - . ID=gene-AB25_RS02205;Name=yjhU;gbkey=Gene;gene=yjhU;gene_biotype=protein_coding;locus_tag=AB25_RS02205;old_locus_tag=AB25_4899 NZ_JJMC01000080.1 Protein Homology CDS 5198 6184 . - 0 ID=cds-WP_000373366.1;Parent=gene-AB25_RS02205;Dbxref=GenBank:WP_000373366.1;Name=WP_000373366.1;Ontology_term=GO:0006355,GO:0003677,GO:0030246;gbkey=CDS;gene=yjhU;go_function=DNA binding|0003677||IEA,carbohydrate binding|0030246||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418715.2;locus_tag=AB25_RS02205;product=sugar-binding transcriptional regulator;protein_id=WP_000373366.1;transl_table=11 NZ_JJMC01000080.1 RefSeq gene 6531 7880 . - . ID=gene-AB25_RS02200;Name=yjhF;gbkey=Gene;gene=yjhF;gene_biotype=protein_coding;locus_tag=AB25_RS02200;old_locus_tag=AB25_4901 NZ_JJMC01000080.1 Protein Homology CDS 6531 7880 . - 0 ID=cds-WP_001128363.1;Parent=gene-AB25_RS02200;Dbxref=GenBank:WP_001128363.1;Name=WP_001128363.1;gbkey=CDS;gene=yjhF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418716.1;locus_tag=AB25_RS02200;product=GntP family permease;protein_id=WP_001128363.1;transl_table=11 NZ_JJMC01000080.1 RefSeq gene 7987 9954 . - . ID=gene-AB25_RS02195;Name=yjhG;gbkey=Gene;gene=yjhG;gene_biotype=protein_coding;locus_tag=AB25_RS02195;old_locus_tag=AB25_4902 NZ_JJMC01000080.1 Protein Homology CDS 7987 9954 . - 0 ID=cds-WP_000116326.1;Parent=gene-AB25_RS02195;Dbxref=GenBank:WP_000116326.1;Name=WP_000116326.1;gbkey=CDS;gene=yjhG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418717.1;locus_tag=AB25_RS02195;product=xylonate dehydratase YjhG;protein_id=WP_000116326.1;transl_table=11 NZ_JJMC01000080.1 RefSeq gene 9965 10870 . - . ID=gene-AB25_RS02190;Name=yjhH;gbkey=Gene;gene=yjhH;gene_biotype=protein_coding;locus_tag=AB25_RS02190;old_locus_tag=AB25_4903 NZ_JJMC01000080.1 Protein Homology CDS 9965 10870 . - 0 ID=cds-WP_000714563.1;Parent=gene-AB25_RS02190;Dbxref=GenBank:WP_000714563.1;Name=WP_000714563.1;gbkey=CDS;gene=yjhH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418718.4;locus_tag=AB25_RS02190;product=dihydrodipicolinate synthase family protein;protein_id=WP_000714563.1;transl_table=11 NZ_JJMC01000080.1 RefSeq gene 10875 11663 . - . ID=gene-AB25_RS02185;Name=yjhI;gbkey=Gene;gene=yjhI;gene_biotype=protein_coding;locus_tag=AB25_RS02185;old_locus_tag=AB25_4904 NZ_JJMC01000080.1 Protein Homology CDS 10875 11663 . - 0 ID=cds-WP_000251798.1;Parent=gene-AB25_RS02185;Dbxref=GenBank:WP_000251798.1;Name=WP_000251798.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=yjhI;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418719.1;locus_tag=AB25_RS02185;product=IclR family transcriptional regulator;protein_id=WP_000251798.1;transl_table=11 NZ_JJMC01000080.1 RefSeq gene 11966 12748 . - . ID=gene-AB25_RS02180;Name=sgcR;gbkey=Gene;gene=sgcR;gene_biotype=protein_coding;locus_tag=AB25_RS02180;old_locus_tag=AB25_4905 NZ_JJMC01000080.1 Protein Homology CDS 11966 12748 . - 0 ID=cds-WP_000082780.1;Parent=gene-AB25_RS02180;Dbxref=GenBank:WP_000082780.1;Name=WP_000082780.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=sgcR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418720.1;locus_tag=AB25_RS02180;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000082780.1;transl_table=11 NZ_JJMC01000080.1 RefSeq gene 12765 13397 . - . ID=gene-AB25_RS02175;Name=sgcE;gbkey=Gene;gene=sgcE;gene_biotype=protein_coding;locus_tag=AB25_RS02175;old_locus_tag=AB25_4906 NZ_JJMC01000080.1 Protein Homology CDS 12765 13397 . - 0 ID=cds-WP_000600622.1;Parent=gene-AB25_RS02175;Dbxref=GenBank:WP_000600622.1;Name=WP_000600622.1;gbkey=CDS;gene=sgcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418721.1;locus_tag=AB25_RS02175;product=ribulose-phosphate 3 epimerase family protein;protein_id=WP_000600622.1;transl_table=11 NZ_JJMC01000080.1 RefSeq gene 13409 13840 . - . ID=gene-AB25_RS02170;Name=sgcA;gbkey=Gene;gene=sgcA;gene_biotype=protein_coding;locus_tag=AB25_RS02170;old_locus_tag=AB25_4907 NZ_JJMC01000080.1 Protein Homology CDS 13409 13840 . - 0 ID=cds-WP_000606406.1;Parent=gene-AB25_RS02170;Dbxref=GenBank:WP_000606406.1;Name=WP_000606406.1;gbkey=CDS;gene=sgcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418722.1;locus_tag=AB25_RS02170;product=SgcA family PTS sugar transporter subunit IIA;protein_id=WP_000606406.1;transl_table=11 NZ_JJMC01000080.1 RefSeq gene 13971 14777 . - . ID=gene-AB25_RS02165;Name=sgcQ;gbkey=Gene;gene=sgcQ;gene_biotype=protein_coding;locus_tag=AB25_RS02165;old_locus_tag=AB25_4908 NZ_JJMC01000080.1 Protein Homology CDS 13971 14777 . - 0 ID=cds-WP_000118626.1;Parent=gene-AB25_RS02165;Dbxref=GenBank:WP_000118626.1;Name=WP_000118626.1;gbkey=CDS;gene=sgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418723.1;locus_tag=AB25_RS02165;product=BtpA family protein SgcQ;protein_id=WP_000118626.1;transl_table=11 NZ_JJMC01000080.1 RefSeq gene 14790 16103 . - . ID=gene-AB25_RS02160;Name=sgcC;gbkey=Gene;gene=sgcC;gene_biotype=protein_coding;locus_tag=AB25_RS02160;old_locus_tag=AB25_4909 NZ_JJMC01000080.1 Protein Homology CDS 14790 16103 . - 0 ID=cds-WP_032171615.1;Parent=gene-AB25_RS02160;Dbxref=GenBank:WP_032171615.1;Name=WP_032171615.1;gbkey=CDS;gene=sgcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418724.1;locus_tag=AB25_RS02160;product=PTS sugar transporter subunit IIC SgcC;protein_id=WP_032171615.1;transl_table=11 NZ_JJMC01000080.1 RefSeq gene 16115 16393 . - . ID=gene-AB25_RS02155;Name=sgcB;gbkey=Gene;gene=sgcB;gene_biotype=protein_coding;locus_tag=AB25_RS02155;old_locus_tag=AB25_4910 NZ_JJMC01000080.1 Protein Homology CDS 16115 16393 . - 0 ID=cds-WP_000722973.1;Parent=gene-AB25_RS02155;Dbxref=GenBank:WP_000722973.1;Name=WP_000722973.1;gbkey=CDS;gene=sgcB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588476.1;locus_tag=AB25_RS02155;product=PTS sugar transporter subunit IIB SgcB;protein_id=WP_000722973.1;transl_table=11 NZ_JJMC01000080.1 RefSeq gene 16390 17511 . - . ID=gene-AB25_RS02150;Name=sgcX;gbkey=Gene;gene=sgcX;gene_biotype=protein_coding;locus_tag=AB25_RS02150;old_locus_tag=AB25_4911 NZ_JJMC01000080.1 Protein Homology CDS 16390 17511 . - 0 ID=cds-WP_000010829.1;Parent=gene-AB25_RS02150;Dbxref=GenBank:WP_000010829.1;Name=WP_000010829.1;gbkey=CDS;gene=sgcX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418725.4;locus_tag=AB25_RS02150;product=M42 family metallopeptidase;protein_id=WP_000010829.1;transl_table=11 NZ_JJMC01000080.1 RefSeq pseudogene 17756 17872 . - . ID=gene-AB25_RS32095;Name=AB25_RS32095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32095;partial=true;pseudo=true;start_range=.,17756 NZ_JJMC01000080.1 Protein Homology CDS 17756 17872 . - 0 ID=cds-AB25_RS32095;Parent=gene-AB25_RS32095;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227376.1;locus_tag=AB25_RS32095;partial=true;product=VOC family protein;pseudo=true;start_range=.,17756;transl_table=11 NZ_JJMC01000080.1 RefSeq pseudogene 17910 18128 . - . ID=gene-AB25_RS30695;Name=AB25_RS30695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS30695;pseudo=true NZ_JJMC01000080.1 Protein Homology CDS 17910 18128 . - 0 ID=cds-AB25_RS30695;Parent=gene-AB25_RS30695;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001348444.1;locus_tag=AB25_RS30695;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJMC01000080.1 RefSeq gene 18297 19043 . - . ID=gene-AB25_RS02145;Name=yjhP;gbkey=Gene;gene=yjhP;gene_biotype=protein_coding;locus_tag=AB25_RS02145;old_locus_tag=AB25_4912 NZ_JJMC01000080.1 Protein Homology CDS 18297 19043 . - 0 ID=cds-WP_000354251.1;Parent=gene-AB25_RS02145;Dbxref=GenBank:WP_000354251.1;Name=WP_000354251.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;gene=yjhP;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418726.1;locus_tag=AB25_RS02145;product=SAM-dependent methyltransferase;protein_id=WP_000354251.1;transl_table=11 NZ_JJMC01000080.1 RefSeq gene 19099 19644 . - . ID=gene-AB25_RS02140;Name=yjhQ;gbkey=Gene;gene=yjhQ;gene_biotype=protein_coding;locus_tag=AB25_RS02140;old_locus_tag=AB25_4913 NZ_JJMC01000080.1 Protein Homology CDS 19099 19644 . - 0 ID=cds-WP_001309181.1;Parent=gene-AB25_RS02140;Dbxref=GenBank:WP_001309181.1;Name=WP_001309181.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;gene=yjhQ;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418727.1;locus_tag=AB25_RS02140;product=GNAT family N-acetyltransferase;protein_id=WP_001309181.1;transl_table=11 NZ_JJMC01000080.1 RefSeq gene 19656 19913 . - . ID=gene-AB25_RS02135;Name=topAI;gbkey=Gene;gene=topAI;gene_biotype=protein_coding;locus_tag=AB25_RS02135;old_locus_tag=AB25_4914 NZ_JJMC01000080.1 Protein Homology CDS 19656 19913 . - 0 ID=cds-WP_001054376.1;Parent=gene-AB25_RS02135;Dbxref=GenBank:WP_001054376.1;Name=WP_001054376.1;gbkey=CDS;gene=topAI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588477.1;locus_tag=AB25_RS02135;product=YjhX family toxin;protein_id=WP_001054376.1;transl_table=11 NZ_JJMC01000080.1 RefSeq gene 20404 20535 . - . ID=gene-AB25_RS32560;Name=AB25_RS32560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32560;old_locus_tag=AB25_4915 NZ_JJMC01000080.1 GeneMarkS-2+ CDS 20404 20535 . - 0 ID=cds-WP_001309182.1;Parent=gene-AB25_RS32560;Dbxref=GenBank:WP_001309182.1;Name=WP_001309182.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB25_RS32560;product=hypothetical protein;protein_id=WP_001309182.1;transl_table=11 NZ_JJMC01000080.1 RefSeq pseudogene 20651 21891 . + . ID=gene-AB25_RS02120;Name=yjhR;gbkey=Gene;gene=yjhR;gene_biotype=pseudogene;locus_tag=AB25_RS02120;old_locus_tag=AB25_4917;partial=true;pseudo=true;start_range=.,20651 NZ_JJMC01000080.1 Protein Homology CDS 20651 21891 . + 0 ID=cds-AB25_RS02120;Parent=gene-AB25_RS02120;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=yjhR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_176259710.1;locus_tag=AB25_RS02120;partial=true;product=helicase YjhR;pseudo=true;start_range=.,20651;transl_table=11 NZ_JJMC01000080.1 RefSeq pseudogene 22159 22364 . - . ID=gene-AB25_RS32565;Name=AB25_RS32565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32565;partial=true;pseudo=true;start_range=.,22159 NZ_JJMC01000080.1 Protein Homology CDS 22159 22364 . - 0 ID=cds-AB25_RS32565;Parent=gene-AB25_RS32565;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000168579.1;locus_tag=AB25_RS32565;partial=true;product=phosphorothioated DNA-binding restriction endonuclease;pseudo=true;start_range=.,22159;transl_table=11 NZ_JJMC01000080.1 RefSeq gene 22457 22555 . + . ID=gene-AB25_RS33005;Name=AB25_RS33005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS33005 NZ_JJMC01000080.1 Protein Homology CDS 22457 22555 . + 0 ID=cds-WP_425306954.1;Parent=gene-AB25_RS33005;Dbxref=GenBank:WP_425306954.1;Name=WP_425306954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051216.1;locus_tag=AB25_RS33005;product=hypothetical protein;protein_id=WP_425306954.1;transl_table=11 NZ_JJMC01000080.1 RefSeq pseudogene 22888 23454 . - . ID=gene-AB25_RS33010;Name=AB25_RS33010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS33010;partial=true;pseudo=true;start_range=.,22888 NZ_JJMC01000080.1 Protein Homology CDS 22888 23454 . - 0 ID=cds-AB25_RS33010;Parent=gene-AB25_RS33010;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015585.6;locus_tag=AB25_RS33010;partial=true;product=sialate O-acetylesterase;pseudo=true;start_range=.,22888;transl_table=11 NZ_JJMC01000080.1 RefSeq gene 23519 24625 . - . ID=gene-AB25_RS02110;Name=nanM;gbkey=Gene;gene=nanM;gene_biotype=protein_coding;locus_tag=AB25_RS02110;old_locus_tag=AB25_4919 NZ_JJMC01000080.1 Protein Homology CDS 23519 24625 . - 0 ID=cds-WP_001594045.1;Parent=gene-AB25_RS02110;Dbxref=GenBank:WP_001594045.1;Name=WP_001594045.1;gbkey=CDS;gene=nanM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418730.4;locus_tag=AB25_RS02110;product=N-acetylneuraminate epimerase;protein_id=WP_001594045.1;transl_table=11 NZ_JJMC01000080.1 RefSeq gene 24645 25361 . - . ID=gene-AB25_RS02105;Name=nanC;gbkey=Gene;gene=nanC;gene_biotype=protein_coding;locus_tag=AB25_RS02105;old_locus_tag=AB25_4920 NZ_JJMC01000080.1 Protein Homology CDS 24645 25361 . - 0 ID=cds-WP_001295734.1;Parent=gene-AB25_RS02105;Dbxref=GenBank:WP_001295734.1;Name=WP_001295734.1;gbkey=CDS;gene=nanC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313297.2;locus_tag=AB25_RS02105;product=N-acetylneuraminic acid outer membrane channel NanC;protein_id=WP_001295734.1;transl_table=11 NZ_JJMC01000080.1 RefSeq gene 26817 27419 . + . ID=gene-AB25_RS02100;Name=fimB;gbkey=Gene;gene=fimB;gene_biotype=protein_coding;locus_tag=AB25_RS02100;old_locus_tag=AB25_4922 NZ_JJMC01000080.1 Protein Homology CDS 26817 27419 . + 0 ID=cds-WP_000790583.1;Parent=gene-AB25_RS02100;Dbxref=GenBank:WP_000790583.1;Name=WP_000790583.1;gbkey=CDS;gene=fimB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313298.1;locus_tag=AB25_RS02100;product=type 1 fimbria switch DNA invertase FimB;protein_id=WP_000790583.1;transl_table=11 NZ_JJMC01000080.1 RefSeq gene 27897 28493 . + . ID=gene-AB25_RS02095;Name=fimE;gbkey=Gene;gene=fimE;gene_biotype=protein_coding;locus_tag=AB25_RS02095;old_locus_tag=AB25_4923 NZ_JJMC01000080.1 Protein Homology CDS 27897 28493 . + 0 ID=cds-WP_000044711.1;Parent=gene-AB25_RS02095;Dbxref=GenBank:WP_000044711.1;Name=WP_000044711.1;Note=upgraded from regulatory protein to switch DNA invertase;gbkey=CDS;gene=fimE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418733.1;locus_tag=AB25_RS02095;product=type 1 fimbria switch DNA invertase FimE;protein_id=WP_000044711.1;transl_table=11 ##sequence-region NZ_JJMC01000081.1 1 43686 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000081.1 RefSeq region 1 43686 . + . ID=NZ_JJMC01000081.1:1..43686;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000081.1 RefSeq gene 434 982 . + . ID=gene-AB25_RS02090;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=AB25_RS02090;old_locus_tag=AB25_4924 NZ_JJMC01000081.1 Protein Homology CDS 434 982 . + 0 ID=cds-WP_032171619.1;Parent=gene-AB25_RS02090;Dbxref=GenBank:WP_032171619.1;Name=WP_032171619.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=fimA;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418734.1;locus_tag=AB25_RS02090;product=type 1 fimbrial major subunit FimA;protein_id=WP_032171619.1;transl_table=11 NZ_JJMC01000081.1 RefSeq gene 1047 1586 . + . ID=gene-AB25_RS02085;Name=fimI;gbkey=Gene;gene=fimI;gene_biotype=protein_coding;locus_tag=AB25_RS02085;old_locus_tag=AB25_4925 NZ_JJMC01000081.1 Protein Homology CDS 1047 1586 . + 0 ID=cds-WP_000824114.1;Parent=gene-AB25_RS02085;Dbxref=GenBank:WP_000824114.1;Name=WP_000824114.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=fimI;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418735.2;locus_tag=AB25_RS02085;product=fimbrial protein;protein_id=WP_000824114.1;transl_table=11 NZ_JJMC01000081.1 RefSeq gene 1623 2348 . + . ID=gene-AB25_RS02080;Name=fimC;gbkey=Gene;gene=fimC;gene_biotype=protein_coding;locus_tag=AB25_RS02080;old_locus_tag=AB25_4926 NZ_JJMC01000081.1 Protein Homology CDS 1623 2348 . + 0 ID=cds-WP_000066560.1;Parent=gene-AB25_RS02080;Dbxref=GenBank:WP_000066560.1;Name=WP_000066560.1;gbkey=CDS;gene=fimC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418736.3;locus_tag=AB25_RS02080;product=type 1 fimbria chaperone FimC;protein_id=WP_000066560.1;transl_table=11 NZ_JJMC01000081.1 RefSeq gene 2415 5051 . + . ID=gene-AB25_RS02075;Name=fimD;gbkey=Gene;gene=fimD;gene_biotype=protein_coding;locus_tag=AB25_RS02075;old_locus_tag=AB25_4927 NZ_JJMC01000081.1 Protein Homology CDS 2415 5051 . + 0 ID=cds-WP_032173591.1;Parent=gene-AB25_RS02075;Dbxref=GenBank:WP_032173591.1;Name=WP_032173591.1;gbkey=CDS;gene=fimD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418737.1;locus_tag=AB25_RS02075;product=fimbrial usher FimD;protein_id=WP_032173591.1;transl_table=11 NZ_JJMC01000081.1 RefSeq gene 5061 5591 . + . ID=gene-AB25_RS02070;Name=fimF;gbkey=Gene;gene=fimF;gene_biotype=protein_coding;locus_tag=AB25_RS02070;old_locus_tag=AB25_4928 NZ_JJMC01000081.1 Protein Homology CDS 5061 5591 . + 0 ID=cds-WP_001244823.1;Parent=gene-AB25_RS02070;Dbxref=GenBank:WP_001244823.1;Name=WP_001244823.1;gbkey=CDS;gene=fimF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313304.1;locus_tag=AB25_RS02070;product=type 1 fimbria minor subunit FimF;protein_id=WP_001244823.1;transl_table=11 NZ_JJMC01000081.1 RefSeq gene 5664 6107 . + . ID=gene-AB25_RS02065;Name=AB25_RS02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS02065;old_locus_tag=AB25_4929 NZ_JJMC01000081.1 Protein Homology CDS 5664 6107 . + 0 ID=cds-WP_077897989.1;Parent=gene-AB25_RS02065;Dbxref=GenBank:WP_077897989.1;Name=WP_077897989.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709915.2;locus_tag=AB25_RS02065;product=fimbrial protein;protein_id=WP_077897989.1;transl_table=11 NZ_JJMC01000081.1 RefSeq gene 6127 7029 . + . ID=gene-AB25_RS02060;Name=fimH;gbkey=Gene;gene=fimH;gene_biotype=protein_coding;locus_tag=AB25_RS02060;old_locus_tag=AB25_4930 NZ_JJMC01000081.1 Protein Homology CDS 6127 7029 . + 0 ID=cds-WP_032171622.1;Parent=gene-AB25_RS02060;Dbxref=GenBank:WP_032171622.1;Name=WP_032171622.1;gbkey=CDS;gene=fimH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313306.1;locus_tag=AB25_RS02060;product=type 1 fimbria D-mannose specific adhesin FimH;protein_id=WP_032171622.1;transl_table=11 NZ_JJMC01000081.1 RefSeq gene 7273 8616 . - . ID=gene-AB25_RS02055;Name=gntP;gbkey=Gene;gene=gntP;gene_biotype=protein_coding;locus_tag=AB25_RS02055;old_locus_tag=AB25_4931 NZ_JJMC01000081.1 Protein Homology CDS 7273 8616 . - 0 ID=cds-WP_000558251.1;Parent=gene-AB25_RS02055;Dbxref=GenBank:WP_000558251.1;Name=WP_000558251.1;gbkey=CDS;gene=gntP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313307.1;locus_tag=AB25_RS02055;product=gluconate permease GntP;protein_id=WP_000558251.1;transl_table=11 NZ_JJMC01000081.1 RefSeq gene 8956 10140 . + . ID=gene-AB25_RS02050;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=AB25_RS02050;old_locus_tag=AB25_4932 NZ_JJMC01000081.1 Protein Homology CDS 8956 10140 . + 0 ID=cds-WP_000438591.1;Parent=gene-AB25_RS02050;Dbxref=GenBank:WP_000438591.1;Name=WP_000438591.1;Ontology_term=GO:0006064,GO:0008927;gbkey=CDS;gene=uxuA;go_function=mannonate dehydratase activity|0008927||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709912.2;locus_tag=AB25_RS02050;product=mannonate dehydratase;protein_id=WP_000438591.1;transl_table=11 NZ_JJMC01000081.1 RefSeq gene 10221 11681 . + . ID=gene-AB25_RS02045;Name=uxuB;gbkey=Gene;gene=uxuB;gene_biotype=protein_coding;locus_tag=AB25_RS02045;old_locus_tag=AB25_4933 NZ_JJMC01000081.1 Protein Homology CDS 10221 11681 . + 0 ID=cds-WP_000208196.1;Parent=gene-AB25_RS02045;Dbxref=GenBank:WP_000208196.1;Name=WP_000208196.1;gbkey=CDS;gene=uxuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313309.1;locus_tag=AB25_RS02045;product=fructuronate reductase;protein_id=WP_000208196.1;transl_table=11 NZ_JJMC01000081.1 RefSeq gene 11896 12669 . + . ID=gene-AB25_RS02035;Name=uxuR;gbkey=Gene;gene=uxuR;gene_biotype=protein_coding;locus_tag=AB25_RS02035;old_locus_tag=AB25_4935 NZ_JJMC01000081.1 Protein Homology CDS 11896 12669 . + 0 ID=cds-WP_000833690.1;Parent=gene-AB25_RS02035;Dbxref=GenBank:WP_000833690.1;Name=WP_000833690.1;gbkey=CDS;gene=uxuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418744.1;locus_tag=AB25_RS02035;product=Uxu operon transcriptional regulator;protein_id=WP_000833690.1;transl_table=11 NZ_JJMC01000081.1 RefSeq gene 12810 13640 . - . ID=gene-AB25_RS02030;Name=yjiC;gbkey=Gene;gene=yjiC;gene_biotype=protein_coding;locus_tag=AB25_RS02030;old_locus_tag=AB25_4936 NZ_JJMC01000081.1 Protein Homology CDS 12810 13640 . - 0 ID=cds-WP_000062589.1;Parent=gene-AB25_RS02030;Dbxref=GenBank:WP_000062589.1;Name=WP_000062589.1;gbkey=CDS;gene=yjiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313311.3;locus_tag=AB25_RS02030;product=DUF2686 family protein;protein_id=WP_000062589.1;transl_table=11 NZ_JJMC01000081.1 RefSeq gene 13927 13995 . + . ID=gene-AB25_RS33015;Name=AB25_RS33015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS33015 NZ_JJMC01000081.1 Protein Homology CDS 13927 13995 . + 0 ID=cds-WP_418267939.1;Parent=gene-AB25_RS33015;Dbxref=GenBank:WP_418267939.1;Name=WP_418267939.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048182.1;locus_tag=AB25_RS33015;product=hypothetical protein;protein_id=WP_418267939.1;transl_table=11 NZ_JJMC01000081.1 RefSeq gene 13974 14117 . + . ID=gene-AB25_RS32770;Name=ytiD;gbkey=Gene;gene=ytiD;gene_biotype=protein_coding;locus_tag=AB25_RS32770;old_locus_tag=AB25_4937 NZ_JJMC01000081.1 Protein Homology CDS 13974 14117 . + 0 ID=cds-WP_001297228.1;Parent=gene-AB25_RS32770;Dbxref=GenBank:WP_001297228.1;Name=WP_001297228.1;gbkey=CDS;gene=ytiD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518831.1;locus_tag=AB25_RS32770;product=protein YtiD;protein_id=WP_001297228.1;transl_table=11 NZ_JJMC01000081.1 RefSeq gene 14233 14316 . + . ID=gene-AB25_RS31835;Name=idlP;gbkey=Gene;gene=idlP;gene_biotype=protein_coding;locus_tag=AB25_RS31835 NZ_JJMC01000081.1 Protein Homology CDS 14233 14316 . + 0 ID=cds-WP_120795393.1;Parent=gene-AB25_RS31835;Dbxref=GenBank:WP_120795393.1;Name=WP_120795393.1;gbkey=CDS;gene=idlP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518832.1;locus_tag=AB25_RS31835;product=iraD leader peptide IdlP;protein_id=WP_120795393.1;transl_table=11 NZ_JJMC01000081.1 RefSeq gene 14313 14705 . + . ID=gene-AB25_RS02020;Name=iraD;gbkey=Gene;gene=iraD;gene_biotype=protein_coding;locus_tag=AB25_RS02020;old_locus_tag=AB25_4939 NZ_JJMC01000081.1 Protein Homology CDS 14313 14705 . + 0 ID=cds-WP_001353484.1;Parent=gene-AB25_RS02020;Dbxref=GenBank:WP_001353484.1;Name=WP_001353484.1;gbkey=CDS;gene=iraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418746.4;locus_tag=AB25_RS02020;product=anti-adapter protein IraD;protein_id=WP_001353484.1;transl_table=11 NZ_JJMC01000081.1 RefSeq gene 14698 15609 . - . ID=gene-AB25_RS02015;Name=hypT;gbkey=Gene;gene=hypT;gene_biotype=protein_coding;gene_synonym=qseD;locus_tag=AB25_RS02015;old_locus_tag=AB25_4940 NZ_JJMC01000081.1 Protein Homology CDS 14698 15609 . - 0 ID=cds-WP_000340758.1;Parent=gene-AB25_RS02015;Dbxref=GenBank:WP_000340758.1;Name=WP_000340758.1;gbkey=CDS;gene=hypT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418747.1;locus_tag=AB25_RS02015;product=hypochlorite stress DNA-binding transcriptional regulator HypT;protein_id=WP_000340758.1;transl_table=11 NZ_JJMC01000081.1 RefSeq gene 15674 16846 . - . ID=gene-AB25_RS02010;Name=iadA;gbkey=Gene;gene=iadA;gene_biotype=protein_coding;locus_tag=AB25_RS02010;old_locus_tag=AB25_4941 NZ_JJMC01000081.1 Protein Homology CDS 15674 16846 . - 0 ID=cds-WP_000568442.1;Parent=gene-AB25_RS02010;Dbxref=GenBank:WP_000568442.1;Name=WP_000568442.1;Ontology_term=GO:0008798;gbkey=CDS;gene=iadA;go_function=beta-aspartyl-peptidase activity|0008798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313313.1;locus_tag=AB25_RS02010;product=beta-aspartyl-peptidase;protein_id=WP_000568442.1;transl_table=11 NZ_JJMC01000081.1 RefSeq gene 16859 17320 . - . ID=gene-AB25_RS02005;Name=yjiG;gbkey=Gene;gene=yjiG;gene_biotype=protein_coding;locus_tag=AB25_RS02005;old_locus_tag=AB25_4942 NZ_JJMC01000081.1 Protein Homology CDS 16859 17320 . - 0 ID=cds-WP_000211971.1;Parent=gene-AB25_RS02005;Dbxref=GenBank:WP_000211971.1;Name=WP_000211971.1;gbkey=CDS;gene=yjiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313314.1;locus_tag=AB25_RS02005;product=YjiG family protein;protein_id=WP_000211971.1;transl_table=11 NZ_JJMC01000081.1 RefSeq gene 17317 18000 . - . ID=gene-AB25_RS02000;Name=yjiH;gbkey=Gene;gene=yjiH;gene_biotype=protein_coding;locus_tag=AB25_RS02000;old_locus_tag=AB25_4943 NZ_JJMC01000081.1 Protein Homology CDS 17317 18000 . - 0 ID=cds-WP_001295597.1;Parent=gene-AB25_RS02000;Dbxref=GenBank:WP_001295597.1;Name=WP_001295597.1;gbkey=CDS;gene=yjiH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418750.2;locus_tag=AB25_RS02000;product=nucleoside recognition domain-containing protein;protein_id=WP_001295597.1;transl_table=11 NZ_JJMC01000081.1 RefSeq gene 18250 18804 . + . ID=gene-AB25_RS01995;Name=kptA;gbkey=Gene;gene=kptA;gene_biotype=protein_coding;locus_tag=AB25_RS01995;old_locus_tag=AB25_4944 NZ_JJMC01000081.1 Protein Homology CDS 18250 18804 . + 0 ID=cds-WP_001151855.1;Parent=gene-AB25_RS01995;Dbxref=GenBank:WP_001151855.1;Name=WP_001151855.1;gbkey=CDS;gene=kptA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151849.1;locus_tag=AB25_RS01995;product=RNA 2'-phosphotransferase;protein_id=WP_001151855.1;transl_table=11 NZ_JJMC01000081.1 RefSeq gene 18817 19995 . - . ID=gene-AB25_RS01990;Name=yjiJ;gbkey=Gene;gene=yjiJ;gene_biotype=protein_coding;locus_tag=AB25_RS01990;old_locus_tag=AB25_4945 NZ_JJMC01000081.1 Protein Homology CDS 18817 19995 . - 0 ID=cds-WP_001141195.1;Parent=gene-AB25_RS01990;Dbxref=GenBank:WP_001141195.1;Name=WP_001141195.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjiJ;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418752.1;locus_tag=AB25_RS01990;product=MFS transporter;protein_id=WP_001141195.1;transl_table=11 NZ_JJMC01000081.1 RefSeq gene 20063 20923 . - . ID=gene-AB25_RS01985;Name=yjiK;gbkey=Gene;gene=yjiK;gene_biotype=protein_coding;locus_tag=AB25_RS01985;old_locus_tag=AB25_4946 NZ_JJMC01000081.1 Protein Homology CDS 20063 20923 . - 0 ID=cds-WP_001298932.1;Parent=gene-AB25_RS01985;Dbxref=GenBank:WP_001298932.1;Name=WP_001298932.1;gbkey=CDS;gene=yjiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418753.3;locus_tag=AB25_RS01985;product=SdiA-regulated domain-containing protein;protein_id=WP_001298932.1;transl_table=11 NZ_JJMC01000081.1 RefSeq gene 20988 21245 . - . ID=gene-AB25_RS01980;Name=ytiA;gbkey=Gene;gene=ytiA;gene_biotype=protein_coding;locus_tag=AB25_RS01980;old_locus_tag=AB25_4947 NZ_JJMC01000081.1 Protein Homology CDS 20988 21245 . - 0 ID=cds-WP_000657675.1;Parent=gene-AB25_RS01980;Dbxref=GenBank:WP_000657675.1;Name=WP_000657675.1;gbkey=CDS;gene=ytiA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518833.1;locus_tag=AB25_RS01980;product=DUF3343 domain-containing protein;protein_id=WP_000657675.1;transl_table=11 NZ_JJMC01000081.1 RefSeq gene 21242 22009 . - . ID=gene-AB25_RS01975;Name=yjiL;gbkey=Gene;gene=yjiL;gene_biotype=protein_coding;locus_tag=AB25_RS01975;old_locus_tag=AB25_4948 NZ_JJMC01000081.1 Protein Homology CDS 21242 22009 . - 0 ID=cds-WP_000222496.1;Parent=gene-AB25_RS01975;Dbxref=GenBank:WP_000222496.1;Name=WP_000222496.1;Note=YjiL%2C as found in Escherichia coli%2C is a homolog of the activator ATPases of enzymes such as lactoyl-CoA dehydratase%2C (R)-phenyllactate dehydratase%2C and 2-hydroxyisocaproyl-CoA dehydratase. The typical substrate of those enzymes is acyl-CoA with an OH at the beta-position. YjiL is the putative activator for the cognate protein YjiM%2C a putative 2-hydroxyacyl-CoA dehydratase with unknown specificity%2C encoded by the adjacent gene.;gbkey=CDS;gene=yjiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313324.1;locus_tag=AB25_RS01975;product=putative 2-hydroxyacyl-CoA dehydratase activator YjiL;protein_id=WP_000222496.1;transl_table=11 NZ_JJMC01000081.1 RefSeq gene 22019 23170 . - . ID=gene-AB25_RS01970;Name=yjiM;gbkey=Gene;gene=yjiM;gene_biotype=protein_coding;locus_tag=AB25_RS01970;old_locus_tag=AB25_4949 NZ_JJMC01000081.1 Protein Homology CDS 22019 23170 . - 0 ID=cds-WP_001300712.1;Parent=gene-AB25_RS01970;Dbxref=GenBank:WP_001300712.1;Name=WP_001300712.1;gbkey=CDS;gene=yjiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418755.4;locus_tag=AB25_RS01970;product=double-cubane-cluster-containing anaerobic reductase;protein_id=WP_001300712.1;transl_table=11 NZ_JJMC01000081.1 RefSeq gene 23286 24566 . - . ID=gene-AB25_RS01965;Name=yjiN;gbkey=Gene;gene=yjiN;gene_biotype=protein_coding;locus_tag=AB25_RS01965;old_locus_tag=AB25_4950 NZ_JJMC01000081.1 Protein Homology CDS 23286 24566 . - 0 ID=cds-WP_001037373.1;Parent=gene-AB25_RS01965;Dbxref=GenBank:WP_001037373.1;Name=WP_001037373.1;gbkey=CDS;gene=yjiN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418756.1;locus_tag=AB25_RS01965;product=DUF445 domain-containing protein;protein_id=WP_001037373.1;transl_table=11 NZ_JJMC01000081.1 RefSeq gene 24607 25839 . - . ID=gene-AB25_RS01960;Name=mdtM;gbkey=Gene;gene=mdtM;gene_biotype=protein_coding;locus_tag=AB25_RS01960;old_locus_tag=AB25_4951 NZ_JJMC01000081.1 Protein Homology CDS 24607 25839 . - 0 ID=cds-WP_001137021.1;Parent=gene-AB25_RS01960;Dbxref=GenBank:WP_001137021.1;Name=WP_001137021.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtM;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313327.1;locus_tag=AB25_RS01960;product=multidrug efflux MFS transporter MdtM;protein_id=WP_001137021.1;transl_table=11 NZ_JJMC01000081.1 RefSeq gene 26165 26863 . + . ID=gene-AB25_RS30700;Name=AB25_RS30700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS30700;old_locus_tag=AB25_4952 NZ_JJMC01000081.1 Protein Homology CDS 26165 26863 . + 0 ID=cds-WP_077757197.1;Parent=gene-AB25_RS30700;Dbxref=GenBank:WP_077757197.1;Name=WP_077757197.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558153.1;locus_tag=AB25_RS30700;product=IS1 family transposase;protein_id=WP_077757197.1;transl_table=11 NZ_JJMC01000081.1 RefSeq pseudogene 26880 27140 . + . ID=gene-AB25_RS29405;Name=AB25_RS29405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS29405;partial=true;pseudo=true;start_range=.,26880 NZ_JJMC01000081.1 Protein Homology CDS 26880 27140 . + 0 ID=cds-AB25_RS29405;Parent=gene-AB25_RS29405;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001390635.1;locus_tag=AB25_RS29405;partial=true;product=alpha/beta hydrolase-fold protein;pseudo=true;start_range=.,26880;transl_table=11 NZ_JJMC01000081.1 RefSeq pseudogene 27282 28407 . - . ID=gene-AB25_RS0126610;Name=AB25_RS0126610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS0126610;old_locus_tag=AB25_4955;pseudo=true NZ_JJMC01000081.1 Protein Homology CDS 27282 28407 . - 0 ID=cds-AB25_RS0126610;Parent=gene-AB25_RS0126610;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309397.1;locus_tag=AB25_RS0126610;product=nucleotide disphospho-sugar-binding domain-containing protein;pseudo=true;transl_table=11 NZ_JJMC01000081.1 RefSeq gene 29137 29334 . - . ID=gene-AB25_RS01955;Name=AB25_RS01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01955;old_locus_tag=AB25_4958 NZ_JJMC01000081.1 Protein Homology CDS 29137 29334 . - 0 ID=cds-WP_000958487.1;Parent=gene-AB25_RS01955;Dbxref=GenBank:WP_000958487.1;Name=WP_000958487.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502603.1;locus_tag=AB25_RS01955;product=helix-turn-helix transcriptional regulator;protein_id=WP_000958487.1;transl_table=11 NZ_JJMC01000081.1 RefSeq pseudogene 29400 29670 . - . ID=gene-AB25_RS30705;Name=AB25_RS30705;end_range=29670,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS30705;old_locus_tag=AB25_4959;partial=true;pseudo=true NZ_JJMC01000081.1 Protein Homology CDS 29400 29670 . - 0 ID=cds-AB25_RS30705;Parent=gene-AB25_RS30705;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=29670,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001593693.1;locus_tag=AB25_RS30705;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJMC01000081.1 RefSeq gene 29975 30163 . + . ID=gene-AB25_RS32100;Name=AB25_RS32100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32100 NZ_JJMC01000081.1 GeneMarkS-2+ CDS 29975 30163 . + 0 ID=cds-WP_000180465.1;Parent=gene-AB25_RS32100;Dbxref=GenBank:WP_000180465.1;Name=WP_000180465.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB25_RS32100;product=hypothetical protein;protein_id=WP_000180465.1;transl_table=11 NZ_JJMC01000081.1 RefSeq gene 30491 30685 . + . ID=gene-AB25_RS01945;Name=AB25_RS01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01945;old_locus_tag=AB25_4964 NZ_JJMC01000081.1 Protein Homology CDS 30491 30685 . + 0 ID=cds-WP_001004881.1;Parent=gene-AB25_RS01945;Dbxref=GenBank:WP_001004881.1;Name=WP_001004881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309391.1;locus_tag=AB25_RS01945;product=hypothetical protein;protein_id=WP_001004881.1;transl_table=11 NZ_JJMC01000081.1 RefSeq pseudogene 30998 31362 . + . ID=gene-AB25_RS33020;Name=AB25_RS33020;end_range=31362,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS33020;partial=true;pseudo=true;start_range=.,30998 NZ_JJMC01000081.1 Protein Homology CDS 30998 31362 . + 0 ID=cds-AB25_RS33020;Parent=gene-AB25_RS33020;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0015074;end_range=31362,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611151.1;locus_tag=AB25_RS33020;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;start_range=.,30998;transl_table=11 NZ_JJMC01000081.1 RefSeq pseudogene 31484 31820 . - . ID=gene-AB25_RS31845;Name=AB25_RS31845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS31845;pseudo=true NZ_JJMC01000081.1 Protein Homology CDS 31484 31820 . - 0 ID=cds-AB25_RS31845;Parent=gene-AB25_RS31845;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502602.1;locus_tag=AB25_RS31845;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJMC01000081.1 RefSeq gene 32454 32672 . - . ID=gene-AB25_RS01935;Name=AB25_RS01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01935;old_locus_tag=AB25_4967 NZ_JJMC01000081.1 Protein Homology CDS 32454 32672 . - 0 ID=cds-WP_000477617.1;Parent=gene-AB25_RS01935;Dbxref=GenBank:WP_000477617.1;Name=WP_000477617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309389.2;locus_tag=AB25_RS01935;product=hypothetical protein;protein_id=WP_000477617.1;transl_table=11 NZ_JJMC01000081.1 RefSeq gene 34002 34184 . - . ID=gene-AB25_RS32850;Name=AB25_RS32850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32850 NZ_JJMC01000081.1 Protein Homology CDS 34002 34184 . - 0 ID=cds-WP_000922604.1;Parent=gene-AB25_RS32850;Dbxref=GenBank:WP_000922604.1;Name=WP_000922604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000922600.1;locus_tag=AB25_RS32850;product=hypothetical protein;protein_id=WP_000922604.1;transl_table=11 NZ_JJMC01000081.1 RefSeq gene 34123 36213 . + . ID=gene-AB25_RS01925;Name=iha;gbkey=Gene;gene=iha;gene_biotype=protein_coding;locus_tag=AB25_RS01925;old_locus_tag=AB25_4969 NZ_JJMC01000081.1 Protein Homology CDS 34123 36213 . + 0 ID=cds-WP_032179876.1;Parent=gene-AB25_RS01925;Dbxref=GenBank:WP_032179876.1;Name=WP_032179876.1;gbkey=CDS;gene=iha;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309387.1;locus_tag=AB25_RS01925;product=bifunctional siderophore receptor/adhesin Iha;protein_id=WP_032179876.1;transl_table=11 NZ_JJMC01000081.1 RefSeq pseudogene 36431 36581 . - . ID=gene-AB25_RS31450;Name=AB25_RS31450;end_range=36581,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS31450;partial=true;pseudo=true NZ_JJMC01000081.1 Protein Homology CDS 36431 36581 . - 0 ID=cds-AB25_RS31450;Parent=gene-AB25_RS31450;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=36581,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001562684.1;locus_tag=AB25_RS31450;partial=true;product=transposase domain-containing protein;pseudo=true;transl_table=11 NZ_JJMC01000081.1 RefSeq pseudogene 37146 37598 . - . ID=gene-AB25_RS01920;Name=AB25_RS01920;end_range=37598,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS01920;old_locus_tag=AB25_4970;partial=true;pseudo=true NZ_JJMC01000081.1 Protein Homology CDS 37146 37598 . - 0 ID=cds-AB25_RS01920;Parent=gene-AB25_RS01920;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=37598,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000998048.1;locus_tag=AB25_RS01920;partial=true;product=IS66 family transposase;pseudo=true;transl_table=11 NZ_JJMC01000081.1 RefSeq gene 37769 38194 . + . ID=gene-AB25_RS01915;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AB25_RS01915;old_locus_tag=AB25_4971 NZ_JJMC01000081.1 Protein Homology CDS 37769 38194 . + 0 ID=cds-WP_000422740.1;Parent=gene-AB25_RS01915;Dbxref=GenBank:WP_000422740.1;Name=WP_000422740.1;gbkey=CDS;gene=tnpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001373091.1;locus_tag=AB25_RS01915;product=IS66-like element accessory protein TnpA;protein_id=WP_000422740.1;transl_table=11 NZ_JJMC01000081.1 RefSeq gene 38191 38481 . + . ID=gene-AB25_RS01910;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AB25_RS01910;old_locus_tag=AB25_4972 NZ_JJMC01000081.1 Protein Homology CDS 38191 38481 . + 0 ID=cds-WP_000624715.1;Parent=gene-AB25_RS01910;Dbxref=GenBank:WP_000624715.1;Name=WP_000624715.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311895.1;locus_tag=AB25_RS01910;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000624715.1;transl_table=11 NZ_JJMC01000081.1 RefSeq gene 38733 39476 . - . ID=gene-AB25_RS01905;Name=AB25_RS01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01905;old_locus_tag=AB25_4974 NZ_JJMC01000081.1 Protein Homology CDS 38733 39476 . - 0 ID=cds-WP_005067636.1;Parent=gene-AB25_RS01905;Dbxref=GenBank:WP_005067636.1;Name=WP_005067636.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005067636.1;locus_tag=AB25_RS01905;product=Crp/Fnr family transcriptional regulator;protein_id=WP_005067636.1;transl_table=11 NZ_JJMC01000081.1 RefSeq gene 39526 40893 . - . ID=gene-AB25_RS01900;Name=AB25_RS01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01900;old_locus_tag=AB25_4975 NZ_JJMC01000081.1 Protein Homology CDS 39526 40893 . - 0 ID=cds-WP_032171718.1;Parent=gene-AB25_RS01900;Dbxref=GenBank:WP_032171718.1;Name=WP_032171718.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001139133.1;locus_tag=AB25_RS01900;product=MFS transporter;protein_id=WP_032171718.1;transl_table=11 NZ_JJMC01000081.1 RefSeq gene 40965 42077 . - . ID=gene-AB25_RS01895;Name=AB25_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01895;old_locus_tag=AB25_4976 NZ_JJMC01000081.1 Protein Homology CDS 40965 42077 . - 0 ID=cds-WP_000705119.1;Parent=gene-AB25_RS01895;Dbxref=GenBank:WP_000705119.1;Name=WP_000705119.1;Ontology_term=GO:0000287,GO:0003824;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000705119.1;locus_tag=AB25_RS01895;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=WP_000705119.1;transl_table=11 NZ_JJMC01000081.1 RefSeq pseudogene 42258 42724 . + . ID=gene-AB25_RS29445;Name=AB25_RS29445;end_range=42724,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS29445;partial=true;pseudo=true;start_range=.,42258 NZ_JJMC01000081.1 Protein Homology CDS 42258 42724 . + 0 ID=cds-AB25_RS29445;Parent=gene-AB25_RS29445;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=42724,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000058881.1;locus_tag=AB25_RS29445;partial=true;product=type I restriction endonuclease subunit R;pseudo=true;start_range=.,42258;transl_table=11 NZ_JJMC01000081.1 RefSeq pseudogene 42809 43218 . + . ID=gene-AB25_RS29455;Name=AB25_RS29455;end_range=43218,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS29455;partial=true;pseudo=true NZ_JJMC01000081.1 Protein Homology CDS 42809 43218 . + 0 ID=cds-AB25_RS29455;Parent=gene-AB25_RS29455;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=43218,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243830.1;locus_tag=AB25_RS29455;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_JJMC01000081.1 RefSeq pseudogene 43274 43686 . + . ID=gene-AB25_RS01885;Name=AB25_RS01885;end_range=43686,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS01885;old_locus_tag=AB25_4979;partial=true;pseudo=true NZ_JJMC01000081.1 Protein Homology CDS 43274 43686 . + 0 ID=cds-AB25_RS01885;Parent=gene-AB25_RS01885;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=43686,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558160.1;locus_tag=AB25_RS01885;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_JJMC01000081.1 cmsearch sequence_feature 43554 43670 . + . ID=id-AB25_RS01885;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS01885;pseudo=true ##sequence-region NZ_JJMC01000082.1 1 28423 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000082.1 RefSeq region 1 28423 . + . ID=NZ_JJMC01000082.1:1..28423;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000082.1 RefSeq pseudogene 47 744 . + . ID=gene-AB25_RS30725;Name=AB25_RS30725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS30725;pseudo=true NZ_JJMC01000082.1 Protein Homology CDS 47 744 . + 0 ID=cds-AB25_RS30725;Parent=gene-AB25_RS30725;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558153.1;locus_tag=AB25_RS30725;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_JJMC01000082.1 RefSeq gene 943 1230 . + . ID=gene-AB25_RS01865;Name=AB25_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01865;old_locus_tag=AB25_4983 NZ_JJMC01000082.1 Protein Homology CDS 943 1230 . + 0 ID=cds-WP_001297643.1;Parent=gene-AB25_RS01865;Dbxref=GenBank:WP_001297643.1;Name=WP_001297643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463387.1;locus_tag=AB25_RS01865;product=BrnT family toxin;protein_id=WP_001297643.1;transl_table=11 NZ_JJMC01000082.1 RefSeq gene 1217 1519 . + . ID=gene-AB25_RS01860;Name=AB25_RS01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01860;old_locus_tag=AB25_4984 NZ_JJMC01000082.1 Protein Homology CDS 1217 1519 . + 0 ID=cds-WP_000063156.1;Parent=gene-AB25_RS01860;Dbxref=GenBank:WP_000063156.1;Name=WP_000063156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004020443.1;locus_tag=AB25_RS01860;product=BrnA antitoxin family protein;protein_id=WP_000063156.1;transl_table=11 NZ_JJMC01000082.1 RefSeq gene 1553 2509 . - . ID=gene-AB25_RS01855;Name=yjiA;gbkey=Gene;gene=yjiA;gene_biotype=protein_coding;locus_tag=AB25_RS01855;old_locus_tag=AB25_4985 NZ_JJMC01000082.1 Protein Homology CDS 1553 2509 . - 0 ID=cds-WP_032170547.1;Parent=gene-AB25_RS01855;Dbxref=GenBank:WP_032170547.1;Name=WP_032170547.1;gbkey=CDS;gene=yjiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313338.2;locus_tag=AB25_RS01855;product=GTPase;protein_id=WP_032170547.1;transl_table=11 NZ_JJMC01000082.1 RefSeq gene 2520 2723 . - . ID=gene-AB25_RS01850;Name=AB25_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01850;old_locus_tag=AB25_4986 NZ_JJMC01000082.1 Protein Homology CDS 2520 2723 . - 0 ID=cds-WP_000467859.1;Parent=gene-AB25_RS01850;Dbxref=GenBank:WP_000467859.1;Name=WP_000467859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313339.1;locus_tag=AB25_RS01850;product=YbdD/YjiX family protein;protein_id=WP_000467859.1;transl_table=11 NZ_JJMC01000082.1 RefSeq gene 2773 4923 . - . ID=gene-AB25_RS01845;Name=btsT;gbkey=Gene;gene=btsT;gene_biotype=protein_coding;locus_tag=AB25_RS01845;old_locus_tag=AB25_4987 NZ_JJMC01000082.1 Protein Homology CDS 2773 4923 . - 0 ID=cds-WP_001295524.1;Parent=gene-AB25_RS01845;Dbxref=GenBank:WP_001295524.1;Name=WP_001295524.1;gbkey=CDS;gene=btsT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418774.2;locus_tag=AB25_RS01845;product=pyruvate/proton symporter BtsT;protein_id=WP_001295524.1;transl_table=11 NZ_JJMC01000082.1 RefSeq gene 5300 6955 . + . ID=gene-AB25_RS01840;Name=tsr;gbkey=Gene;gene=tsr;gene_biotype=protein_coding;locus_tag=AB25_RS01840;old_locus_tag=AB25_4989 NZ_JJMC01000082.1 Protein Homology CDS 5300 6955 . + 0 ID=cds-WP_000919536.1;Parent=gene-AB25_RS01840;Dbxref=GenBank:WP_000919536.1;Name=WP_000919536.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tsr;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418775.1;locus_tag=AB25_RS01840;product=methyl-accepting chemotaxis protein;protein_id=WP_000919536.1;transl_table=11 NZ_JJMC01000082.1 RefSeq gene 7004 8365 . - . ID=gene-AB25_RS01835;Name=AB25_RS01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01835;old_locus_tag=AB25_4990 NZ_JJMC01000082.1 Protein Homology CDS 7004 8365 . - 0 ID=cds-WP_000410127.1;Parent=gene-AB25_RS01835;Dbxref=GenBank:WP_000410127.1;Name=WP_000410127.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418776.1;locus_tag=AB25_RS01835;product=MFS transporter;protein_id=WP_000410127.1;transl_table=11 NZ_JJMC01000082.1 RefSeq gene 8580 9494 . - . ID=gene-AB25_RS01830;Name=AB25_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01830;old_locus_tag=AB25_4991 NZ_JJMC01000082.1 Protein Homology CDS 8580 9494 . - 0 ID=cds-WP_000091572.1;Parent=gene-AB25_RS01830;Dbxref=GenBank:WP_000091572.1;Name=WP_000091572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313344.2;locus_tag=AB25_RS01830;product=GntR family transcriptional regulator;protein_id=WP_000091572.1;transl_table=11 NZ_JJMC01000082.1 RefSeq gene 9633 10655 . + . ID=gene-AB25_RS01825;Name=lgoD;gbkey=Gene;gene=lgoD;gene_biotype=protein_coding;locus_tag=AB25_RS01825;old_locus_tag=AB25_4992 NZ_JJMC01000082.1 Protein Homology CDS 9633 10655 . + 0 ID=cds-WP_000106030.1;Parent=gene-AB25_RS01825;Dbxref=GenBank:WP_000106030.1;Name=WP_000106030.1;gbkey=CDS;gene=lgoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418778.4;locus_tag=AB25_RS01825;product=L-galactonate oxidoreductase;protein_id=WP_000106030.1;transl_table=11 NZ_JJMC01000082.1 RefSeq gene 10795 13086 . - . ID=gene-AB25_RS01820;Name=opgB;gbkey=Gene;gene=opgB;gene_biotype=protein_coding;locus_tag=AB25_RS01820;old_locus_tag=AB25_4993 NZ_JJMC01000082.1 Protein Homology CDS 10795 13086 . - 0 ID=cds-WP_001292661.1;Parent=gene-AB25_RS01820;Dbxref=GenBank:WP_001292661.1;Name=WP_001292661.1;Ontology_term=GO:0008484;gbkey=CDS;gene=opgB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418779.2;locus_tag=AB25_RS01820;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;protein_id=WP_001292661.1;transl_table=11 NZ_JJMC01000082.1 RefSeq gene 13340 13834 . - . ID=gene-AB25_RS01815;Name=yjjA;gbkey=Gene;gene=yjjA;gene_biotype=protein_coding;locus_tag=AB25_RS01815;old_locus_tag=AB25_4994 NZ_JJMC01000082.1 Protein Homology CDS 13340 13834 . - 0 ID=cds-WP_077248833.1;Parent=gene-AB25_RS01815;Dbxref=GenBank:WP_077248833.1;Name=WP_077248833.1;gbkey=CDS;gene=yjjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418780.2;locus_tag=AB25_RS01815;product=DUF2501 domain-containing protein YjjA;protein_id=WP_077248833.1;transl_table=11 NZ_JJMC01000082.1 RefSeq gene 13883 14620 . - . ID=gene-AB25_RS01810;Name=dnaC;gbkey=Gene;gene=dnaC;gene_biotype=protein_coding;locus_tag=AB25_RS01810;old_locus_tag=AB25_4995 NZ_JJMC01000082.1 Protein Homology CDS 13883 14620 . - 0 ID=cds-WP_000799911.1;Parent=gene-AB25_RS01810;Dbxref=GenBank:WP_000799911.1;Name=WP_000799911.1;gbkey=CDS;gene=dnaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313348.1;locus_tag=AB25_RS01810;product=DNA replication protein DnaC;protein_id=WP_000799911.1;transl_table=11 NZ_JJMC01000082.1 RefSeq gene 14623 15162 . - . ID=gene-AB25_RS01805;Name=dnaT;gbkey=Gene;gene=dnaT;gene_biotype=protein_coding;locus_tag=AB25_RS01805;old_locus_tag=AB25_4996 NZ_JJMC01000082.1 Protein Homology CDS 14623 15162 . - 0 ID=cds-WP_000098818.1;Parent=gene-AB25_RS01805;Dbxref=GenBank:WP_000098818.1;Name=WP_000098818.1;gbkey=CDS;gene=dnaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418782.1;locus_tag=AB25_RS01805;product=primosomal protein DnaT;protein_id=WP_000098818.1;transl_table=11 NZ_JJMC01000082.1 RefSeq gene 15269 15742 . - . ID=gene-AB25_RS01800;Name=AB25_RS01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01800;old_locus_tag=AB25_4997 NZ_JJMC01000082.1 Protein Homology CDS 15269 15742 . - 0 ID=cds-WP_000538178.1;Parent=gene-AB25_RS01800;Dbxref=GenBank:WP_000538178.1;Name=WP_000538178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418783.2;locus_tag=AB25_RS01800;product=threonine/serine exporter;protein_id=WP_000538178.1;transl_table=11 NZ_JJMC01000082.1 RefSeq gene 15733 16503 . - . ID=gene-AB25_RS01795;Name=AB25_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01795;old_locus_tag=AB25_4998 NZ_JJMC01000082.1 Protein Homology CDS 15733 16503 . - 0 ID=cds-WP_001338213.1;Parent=gene-AB25_RS01795;Dbxref=GenBank:WP_001338213.1;Name=WP_001338213.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418784.4;locus_tag=AB25_RS01795;product=threonine/serine ThrE exporter family protein;protein_id=WP_001338213.1;transl_table=11 NZ_JJMC01000082.1 RefSeq gene 17122 17847 . + . ID=gene-AB25_RS01790;Name=AB25_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01790;old_locus_tag=AB25_4999 NZ_JJMC01000082.1 Protein Homology CDS 17122 17847 . + 0 ID=cds-WP_000936635.1;Parent=gene-AB25_RS01790;Dbxref=GenBank:WP_000936635.1;Name=WP_000936635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313352.1;locus_tag=AB25_RS01790;product=helix-turn-helix domain-containing protein;protein_id=WP_000936635.1;transl_table=11 NZ_JJMC01000082.1 RefSeq gene 17805 18482 . + . ID=gene-AB25_RS01785;Name=bglJ;gbkey=Gene;gene=bglJ;gene_biotype=protein_coding;locus_tag=AB25_RS01785;old_locus_tag=AB25_5000 NZ_JJMC01000082.1 Protein Homology CDS 17805 18482 . + 0 ID=cds-WP_001301727.1;Parent=gene-AB25_RS01785;Dbxref=GenBank:WP_001301727.1;Name=WP_001301727.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=bglJ;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418786.4;locus_tag=AB25_RS01785;product=DNA-binding transcriptional activator BglJ;protein_id=WP_001301727.1;transl_table=11 NZ_JJMC01000082.1 RefSeq gene 18520 19308 . - . ID=gene-AB25_RS01780;Name=fhuF;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=AB25_RS01780;old_locus_tag=AB25_5001 NZ_JJMC01000082.1 Protein Homology CDS 18520 19308 . - 0 ID=cds-WP_000331559.1;Parent=gene-AB25_RS01780;Dbxref=GenBank:WP_000331559.1;Name=WP_000331559.1;Ontology_term=GO:0051537;gbkey=CDS;gene=fhuF;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710108.1;locus_tag=AB25_RS01780;product=siderophore-iron reductase FhuF;protein_id=WP_000331559.1;transl_table=11 NZ_JJMC01000082.1 RefSeq gene 19449 19685 . + . ID=gene-AB25_RS01775;Name=AB25_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01775;old_locus_tag=AB25_5002 NZ_JJMC01000082.1 Protein Homology CDS 19449 19685 . + 0 ID=cds-WP_001382695.1;Parent=gene-AB25_RS01775;Dbxref=GenBank:WP_001382695.1;Name=WP_001382695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313355.3;locus_tag=AB25_RS01775;product=DUF1435 domain-containing protein;protein_id=WP_001382695.1;transl_table=11 NZ_JJMC01000082.1 RefSeq gene 19724 19810 . - . ID=gene-AB25_RS01770;Name=AB25_RS01770;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS01770;old_locus_tag=AB25_5003 NZ_JJMC01000082.1 tRNAscan-SE tRNA 19724 19810 . - . ID=rna-AB25_RS01770;Parent=gene-AB25_RS01770;anticodon=(pos:complement(19774..19776));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS01770;product=tRNA-Leu NZ_JJMC01000082.1 tRNAscan-SE exon 19724 19810 . - . ID=exon-AB25_RS01770-1;Parent=rna-AB25_RS01770;anticodon=(pos:complement(19774..19776));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS01770;product=tRNA-Leu NZ_JJMC01000082.1 RefSeq gene 19845 19931 . - . ID=gene-AB25_RS01765;Name=AB25_RS01765;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS01765;old_locus_tag=AB25_5004 NZ_JJMC01000082.1 tRNAscan-SE tRNA 19845 19931 . - . ID=rna-AB25_RS01765;Parent=gene-AB25_RS01765;anticodon=(pos:complement(19895..19897));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS01765;product=tRNA-Leu NZ_JJMC01000082.1 tRNAscan-SE exon 19845 19931 . - . ID=exon-AB25_RS01765-1;Parent=rna-AB25_RS01765;anticodon=(pos:complement(19895..19897));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS01765;product=tRNA-Leu NZ_JJMC01000082.1 RefSeq gene 19960 20046 . - . ID=gene-AB25_RS01760;Name=AB25_RS01760;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS01760;old_locus_tag=AB25_5005 NZ_JJMC01000082.1 tRNAscan-SE tRNA 19960 20046 . - . ID=rna-AB25_RS01760;Parent=gene-AB25_RS01760;anticodon=(pos:complement(20010..20012));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS01760;product=tRNA-Leu NZ_JJMC01000082.1 tRNAscan-SE exon 19960 20046 . - . ID=exon-AB25_RS01760-1;Parent=rna-AB25_RS01760;anticodon=(pos:complement(20010..20012));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS01760;product=tRNA-Leu NZ_JJMC01000082.1 RefSeq gene 20081 20167 . - . ID=gene-AB25_RS01755;Name=AB25_RS01755;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS01755;old_locus_tag=AB25_5006 NZ_JJMC01000082.1 tRNAscan-SE tRNA 20081 20167 . - . ID=rna-AB25_RS01755;Parent=gene-AB25_RS01755;anticodon=(pos:complement(20131..20133));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS01755;product=tRNA-Leu NZ_JJMC01000082.1 tRNAscan-SE exon 20081 20167 . - . ID=exon-AB25_RS01755-1;Parent=rna-AB25_RS01755;anticodon=(pos:complement(20131..20133));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS01755;product=tRNA-Leu NZ_JJMC01000082.1 RefSeq gene 20196 20282 . - . ID=gene-AB25_RS01750;Name=AB25_RS01750;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS01750;old_locus_tag=AB25_5007 NZ_JJMC01000082.1 tRNAscan-SE tRNA 20196 20282 . - . ID=rna-AB25_RS01750;Parent=gene-AB25_RS01750;anticodon=(pos:complement(20246..20248));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS01750;product=tRNA-Leu NZ_JJMC01000082.1 tRNAscan-SE exon 20196 20282 . - . ID=exon-AB25_RS01750-1;Parent=rna-AB25_RS01750;anticodon=(pos:complement(20246..20248));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS01750;product=tRNA-Leu NZ_JJMC01000082.1 RefSeq gene 20550 21581 . - . ID=gene-AB25_RS01745;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=AB25_RS01745;old_locus_tag=AB25_5008 NZ_JJMC01000082.1 Protein Homology CDS 20550 21581 . - 0 ID=cds-WP_032296163.1;Parent=gene-AB25_RS01745;Dbxref=GenBank:WP_032296163.1;Name=WP_032296163.1;Ontology_term=GO:0006364,GO:0003676,GO:0008990;gbkey=CDS;gene=rsmC;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418788.1;locus_tag=AB25_RS01745;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=WP_032296163.1;transl_table=11 NZ_JJMC01000082.1 RefSeq gene 21684 22097 . + . ID=gene-AB25_RS01740;Name=holD;gbkey=Gene;gene=holD;gene_biotype=protein_coding;locus_tag=AB25_RS01740;old_locus_tag=AB25_5009 NZ_JJMC01000082.1 Protein Homology CDS 21684 22097 . + 0 ID=cds-WP_000204018.1;Parent=gene-AB25_RS01740;Dbxref=GenBank:WP_000204018.1;Name=WP_000204018.1;gbkey=CDS;gene=holD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313357.1;locus_tag=AB25_RS01740;product=DNA polymerase III subunit psi;protein_id=WP_000204018.1;transl_table=11 NZ_JJMC01000082.1 RefSeq gene 22066 22512 . + . ID=gene-AB25_RS01735;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=AB25_RS01735;old_locus_tag=AB25_5010 NZ_JJMC01000082.1 Protein Homology CDS 22066 22512 . + 0 ID=cds-WP_001092465.1;Parent=gene-AB25_RS01735;Dbxref=GenBank:WP_001092465.1;Name=WP_001092465.1;Ontology_term=GO:0006474,GO:0008080;gbkey=CDS;gene=rimI;go_function=N-acetyltransferase activity|0008080||IEA;go_process=N-terminal protein amino acid acetylation|0006474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313358.1;locus_tag=AB25_RS01735;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_001092465.1;transl_table=11 NZ_JJMC01000082.1 RefSeq gene 22527 23204 . + . ID=gene-AB25_RS01730;Name=yjjG;gbkey=Gene;gene=yjjG;gene_biotype=protein_coding;locus_tag=AB25_RS01730;old_locus_tag=AB25_5011 NZ_JJMC01000082.1 Protein Homology CDS 22527 23204 . + 0 ID=cds-WP_000870700.1;Parent=gene-AB25_RS01730;Dbxref=GenBank:WP_000870700.1;Name=WP_000870700.1;Ontology_term=GO:0008253;gbkey=CDS;gene=yjjG;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710113.1;locus_tag=AB25_RS01730;product=pyrimidine 5'-nucleotidase;protein_id=WP_000870700.1;transl_table=11 NZ_JJMC01000082.1 RefSeq gene 23295 24884 . + . ID=gene-AB25_RS01725;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=AB25_RS01725;old_locus_tag=AB25_5012 NZ_JJMC01000082.1 Protein Homology CDS 23295 24884 . + 0 ID=cds-WP_000175949.1;Parent=gene-AB25_RS01725;Dbxref=GenBank:WP_000175949.1;Name=WP_000175949.1;Ontology_term=GO:0006415,GO:0003747,GO:0003924,GO:0005525;gbkey=CDS;gene=prfC;go_function=translation release factor activity|0003747||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313360.1;locus_tag=AB25_RS01725;product=peptide chain release factor 3;protein_id=WP_000175949.1;transl_table=11 NZ_JJMC01000082.1 RefSeq gene 25277 25882 . + . ID=gene-AB25_RS01720;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=AB25_RS01720;old_locus_tag=AB25_5013 NZ_JJMC01000082.1 Protein Homology CDS 25277 25882 . + 0 ID=cds-WP_001295748.1;Parent=gene-AB25_RS01720;Dbxref=GenBank:WP_001295748.1;Name=WP_001295748.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418793.1;locus_tag=AB25_RS01720;product=molecular chaperone OsmY;protein_id=WP_001295748.1;transl_table=11 NZ_JJMC01000082.1 RefSeq gene 26009 26170 . + . ID=gene-AB25_RS01715;Name=AB25_RS01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01715;old_locus_tag=AB25_5014 NZ_JJMC01000082.1 Protein Homology CDS 26009 26170 . + 0 ID=cds-WP_000490275.1;Parent=gene-AB25_RS01715;Dbxref=GenBank:WP_000490275.1;Name=WP_000490275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887716.1;locus_tag=AB25_RS01715;product=DUF1328 domain-containing protein;protein_id=WP_000490275.1;transl_table=11 NZ_JJMC01000082.1 RefSeq gene 26292 27365 . + . ID=gene-AB25_RS01710;Name=AB25_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01710;old_locus_tag=AB25_5015 NZ_JJMC01000082.1 Protein Homology CDS 26292 27365 . + 0 ID=cds-WP_001299799.1;Parent=gene-AB25_RS01710;Dbxref=GenBank:WP_001299799.1;Name=WP_001299799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418794.1;locus_tag=AB25_RS01710;product=patatin-like phospholipase family protein;protein_id=WP_001299799.1;transl_table=11 NZ_JJMC01000082.1 RefSeq gene 27362 28144 . + . ID=gene-AB25_RS01705;Name=AB25_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01705;old_locus_tag=AB25_5016 NZ_JJMC01000082.1 Protein Homology CDS 27362 28144 . + 0 ID=cds-WP_000563058.1-2;Parent=gene-AB25_RS01705;Dbxref=GenBank:WP_000563058.1;Name=WP_000563058.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313363.2;locus_tag=AB25_RS01705;product=metal-dependent hydrolase;protein_id=WP_000563058.1;transl_table=11 ##sequence-region NZ_JJMC01000083.1 1 308 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000083.1 RefSeq region 1 308 . + . ID=NZ_JJMC01000083.1:1..308;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000083.1 RefSeq pseudogene 99 304 . + . ID=gene-AB25_RS33025;Name=AB25_RS33025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS33025;pseudo=true NZ_JJMC01000083.1 Protein Homology CDS 99 304 . + 0 ID=cds-AB25_RS33025;Parent=gene-AB25_RS33025;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000547968.1;locus_tag=AB25_RS33025;product=single-stranded DNA-binding protein;pseudo=true;transl_table=11 ##sequence-region NZ_JJMC01000084.1 1 13260 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000084.1 RefSeq region 1 13260 . + . ID=NZ_JJMC01000084.1:1..13260;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000084.1 RefSeq gene 1 743 . + . ID=gene-AB25_RS01700;Name=sitD;gbkey=Gene;gene=sitD;gene_biotype=protein_coding;locus_tag=AB25_RS01700;old_locus_tag=AB25_5017;partial=true;start_range=.,1 NZ_JJMC01000084.1 Protein Homology CDS 1 743 . + 2 ID=cds-WP_032171893.1;Parent=gene-AB25_RS01700;Dbxref=GenBank:WP_032171893.1;Name=WP_032171893.1;gbkey=CDS;gene=sitD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032491457.1;locus_tag=AB25_RS01700;partial=true;product=iron/manganese ABC transporter permease subunit SitD;protein_id=WP_032171893.1;start_range=.,1;transl_table=11 NZ_JJMC01000084.1 RefSeq pseudogene 977 1225 . - . ID=gene-AB25_RS30730;Name=AB25_RS30730;end_range=1225,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS30730;partial=true;pseudo=true NZ_JJMC01000084.1 Protein Homology CDS 977 1225 . - 0 ID=cds-AB25_RS30730;Parent=gene-AB25_RS30730;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=1225,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611787.1;locus_tag=AB25_RS30730;partial=true;product=Tn3 family transposase;pseudo=true;transl_table=11 NZ_JJMC01000084.1 RefSeq pseudogene 1232 1645 . + . ID=gene-AB25_RS01695;Name=AB25_RS01695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS01695;old_locus_tag=AB25_5018;partial=true;pseudo=true;start_range=.,1232 NZ_JJMC01000084.1 Protein Homology CDS 1232 1645 . + 0 ID=cds-AB25_RS01695;Parent=gene-AB25_RS01695;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015377870.1;locus_tag=AB25_RS01695;partial=true;product=phosphopyruvate hydratase;pseudo=true;start_range=.,1232;transl_table=11 NZ_JJMC01000084.1 RefSeq gene 1986 2366 . + . ID=gene-AB25_RS0126675;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=AB25_RS0126675 NZ_JJMC01000084.1 Protein Homology CDS 1986 2366 . + 0 ID=cds-WP_001318207.1;Parent=gene-AB25_RS0126675;Dbxref=GenBank:WP_001318207.1;Name=WP_001318207.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001318207.1;locus_tag=AB25_RS0126675;product=fluoride efflux transporter CrcB;protein_id=WP_001318207.1;transl_table=11 NZ_JJMC01000084.1 RefSeq gene 2746 3939 . - . ID=gene-AB25_RS01690;Name=AB25_RS01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01690;old_locus_tag=AB25_5019 NZ_JJMC01000084.1 Protein Homology CDS 2746 3939 . - 0 ID=cds-WP_000095526.1;Parent=gene-AB25_RS01690;Dbxref=GenBank:WP_000095526.1;Name=WP_000095526.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709453.1;locus_tag=AB25_RS01690;product=MFS transporter;protein_id=WP_000095526.1;transl_table=11 NZ_JJMC01000084.1 RefSeq gene 4075 5799 . + . ID=gene-AB25_RS01685;Name=iucA;gbkey=Gene;gene=iucA;gene_biotype=protein_coding;locus_tag=AB25_RS01685;old_locus_tag=AB25_5020 NZ_JJMC01000084.1 Protein Homology CDS 4075 5799 . + 0 ID=cds-WP_000602863.1;Parent=gene-AB25_RS01685;Dbxref=GenBank:WP_000602863.1;Name=WP_000602863.1;gbkey=CDS;gene=iucA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001314127.1;locus_tag=AB25_RS01685;product=aerobactin synthase IucA;protein_id=WP_000602863.1;transl_table=11 NZ_JJMC01000084.1 RefSeq gene 5800 6747 . + . ID=gene-AB25_RS01680;Name=iucB;gbkey=Gene;gene=iucB;gene_biotype=protein_coding;locus_tag=AB25_RS01680;old_locus_tag=AB25_5021 NZ_JJMC01000084.1 Protein Homology CDS 5800 6747 . + 0 ID=cds-WP_000011908.1;Parent=gene-AB25_RS01680;Dbxref=GenBank:WP_000011908.1;Name=WP_000011908.1;gbkey=CDS;gene=iucB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709455.1;locus_tag=AB25_RS01680;product=N(6)-hydroxylysine O-acetyltransferase IucB;protein_id=WP_000011908.1;transl_table=11 NZ_JJMC01000084.1 RefSeq gene 6747 8489 . + . ID=gene-AB25_RS01675;Name=iucC;gbkey=Gene;gene=iucC;gene_biotype=protein_coding;locus_tag=AB25_RS01675;old_locus_tag=AB25_5022 NZ_JJMC01000084.1 Protein Homology CDS 6747 8489 . + 0 ID=cds-WP_001015721.1;Parent=gene-AB25_RS01675;Dbxref=GenBank:WP_001015721.1;Name=WP_001015721.1;gbkey=CDS;gene=iucC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709456.1;locus_tag=AB25_RS01675;product=NIS family aerobactin synthetase IucC;protein_id=WP_001015721.1;transl_table=11 NZ_JJMC01000084.1 RefSeq pseudogene 8486 9819 . + . ID=gene-AB25_RS01670;Name=iucD;gbkey=Gene;gene=iucD;gene_biotype=pseudogene;locus_tag=AB25_RS01670;old_locus_tag=AB25_5023;pseudo=true NZ_JJMC01000084.1 Protein Homology CDS 8486 9819 . + 0 ID=cds-AB25_RS01670;Parent=gene-AB25_RS01670;Note=frameshifted;gbkey=CDS;gene=iucD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016528830.1;locus_tag=AB25_RS01670;product=NADPH-dependent L-lysine N(6)-monooxygenase IucD;pseudo=true;transl_table=11 NZ_JJMC01000084.1 RefSeq gene 9845 12046 . + . ID=gene-AB25_RS01665;Name=iutA;gbkey=Gene;gene=iutA;gene_biotype=protein_coding;locus_tag=AB25_RS01665;old_locus_tag=AB25_5024 NZ_JJMC01000084.1 Protein Homology CDS 9845 12046 . + 0 ID=cds-WP_000973519.1;Parent=gene-AB25_RS01665;Dbxref=GenBank:WP_000973519.1;Name=WP_000973519.1;gbkey=CDS;gene=iutA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213924.1;locus_tag=AB25_RS01665;product=ferric aerobactin receptor IutA;protein_id=WP_000973519.1;transl_table=11 NZ_JJMC01000084.1 RefSeq gene 12289 13260 . + . ID=gene-AB25_RS01660;Name=AB25_RS01660;end_range=13260,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01660;old_locus_tag=AB25_5025;partial=true NZ_JJMC01000084.1 Protein Homology CDS 12289 13260 . + 0 ID=cds-WP_032295907.1-3;Parent=gene-AB25_RS01660;Dbxref=GenBank:WP_032295907.1;Name=WP_032295907.1;Ontology_term=GO:0006313,GO:0004803;end_range=13260,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AB25_RS01660;partial=true;product=IS5-like element IS5 family transposase;protein_id=WP_032295907.1;transl_table=11 ##sequence-region NZ_JJMC01000085.1 1 48556 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000085.1 RefSeq region 1 48556 . + . ID=NZ_JJMC01000085.1:1..48556;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000085.1 RefSeq pseudogene 1 107 . + . ID=gene-AB25_RS32570;Name=AB25_RS32570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32570;old_locus_tag=AB25_5026;partial=true;pseudo=true;start_range=.,1 NZ_JJMC01000085.1 Protein Homology CDS 1 107 . + 2 ID=cds-AB25_RS32570;Parent=gene-AB25_RS32570;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052650.1;locus_tag=AB25_RS32570;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 104 295 . + . ID=gene-AB25_RS01655;Name=AB25_RS01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01655;old_locus_tag=AB25_5027 NZ_JJMC01000085.1 Protein Homology CDS 104 295 . + 0 ID=cds-WP_001024838.1;Parent=gene-AB25_RS01655;Dbxref=GenBank:WP_001024838.1;Name=WP_001024838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238862.1;locus_tag=AB25_RS01655;product=hypothetical protein;protein_id=WP_001024838.1;transl_table=11 NZ_JJMC01000085.1 RefSeq pseudogene 628 837 . - . ID=gene-AB25_RS33030;Name=AB25_RS33030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS33030;partial=true;pseudo=true;start_range=.,628 NZ_JJMC01000085.1 Protein Homology CDS 628 837 . - 0 ID=cds-AB25_RS33030;Parent=gene-AB25_RS33030;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001304227.1;locus_tag=AB25_RS33030;partial=true;product=hypothetical protein;pseudo=true;start_range=.,628;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 1065 1592 . + . ID=gene-AB25_RS01645;Name=AB25_RS01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01645;old_locus_tag=AB25_5029 NZ_JJMC01000085.1 Protein Homology CDS 1065 1592 . + 0 ID=cds-WP_001276103.1;Parent=gene-AB25_RS01645;Dbxref=GenBank:WP_001276103.1;Name=WP_001276103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052656.1;locus_tag=AB25_RS01645;product=single-stranded DNA-binding protein;protein_id=WP_001276103.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 1649 1882 . + . ID=gene-AB25_RS01640;Name=AB25_RS01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01640;old_locus_tag=AB25_5030 NZ_JJMC01000085.1 Protein Homology CDS 1649 1882 . + 0 ID=cds-WP_000005972.1;Parent=gene-AB25_RS01640;Dbxref=GenBank:WP_000005972.1;Name=WP_000005972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_958724.1;locus_tag=AB25_RS01640;product=DUF905 domain-containing protein;protein_id=WP_000005972.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 1941 3899 . + . ID=gene-AB25_RS01635;Name=AB25_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01635;old_locus_tag=AB25_5031 NZ_JJMC01000085.1 Protein Homology CDS 1941 3899 . + 0 ID=cds-WP_032171890.1;Parent=gene-AB25_RS01635;Dbxref=GenBank:WP_032171890.1;Name=WP_032171890.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000117326.1;locus_tag=AB25_RS01635;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_032171890.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 3954 4388 . + . ID=gene-AB25_RS01630;Name=psiB;gbkey=Gene;gene=psiB;gene_biotype=protein_coding;locus_tag=AB25_RS01630;old_locus_tag=AB25_5032 NZ_JJMC01000085.1 Protein Homology CDS 3954 4388 . + 0 ID=cds-WP_001578018.1;Parent=gene-AB25_RS01630;Dbxref=GenBank:WP_001578018.1;Name=WP_001578018.1;gbkey=CDS;gene=psiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000845953.1;locus_tag=AB25_RS01630;product=conjugation system SOS inhibitor PsiB;protein_id=WP_001578018.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 4385 5104 . + . ID=gene-AB25_RS01625;Name=AB25_RS01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01625;old_locus_tag=AB25_5033 NZ_JJMC01000085.1 Protein Homology CDS 4385 5104 . + 0 ID=cds-WP_001276270.1;Parent=gene-AB25_RS01625;Dbxref=GenBank:WP_001276270.1;Name=WP_001276270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001584594.1;locus_tag=AB25_RS01625;product=plasmid SOS inhibition protein A;protein_id=WP_001276270.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 5101 5697 . + . ID=gene-AB25_RS01620;Name=AB25_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01620;old_locus_tag=AB25_5034 NZ_JJMC01000085.1 Protein Homology CDS 5101 5697 . + 0 ID=cds-WP_000977995.1;Parent=gene-AB25_RS01620;Dbxref=GenBank:WP_000977995.1;Name=WP_000977995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000978013.1;locus_tag=AB25_RS01620;product=hypothetical protein;protein_id=WP_000977995.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 6159 6659 . + . ID=gene-AB25_RS01615;Name=AB25_RS01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01615;old_locus_tag=AB25_5035 NZ_JJMC01000085.1 Protein Homology CDS 6159 6659 . + 0 ID=cds-WP_000117624.1;Parent=gene-AB25_RS01615;Dbxref=GenBank:WP_000117624.1;Name=WP_000117624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000117633.1;locus_tag=AB25_RS01615;product=antirestriction protein ArdA;protein_id=WP_000117624.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 7389 7823 . + . ID=gene-AB25_RS01610;Name=AB25_RS01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01610;old_locus_tag=AB25_5037 NZ_JJMC01000085.1 Protein Homology CDS 7389 7823 . + 0 ID=cds-WP_000218858.1;Parent=gene-AB25_RS01610;Dbxref=GenBank:WP_000218858.1;Name=WP_000218858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000218847.1;locus_tag=AB25_RS01610;product=hypothetical protein;protein_id=WP_000218858.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 7916 8182 . + . ID=gene-AB25_RS01605;Name=AB25_RS01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01605;old_locus_tag=AB25_5038 NZ_JJMC01000085.1 Protein Homology CDS 7916 8182 . + 0 ID=cds-WP_000804663.1;Parent=gene-AB25_RS01605;Dbxref=GenBank:WP_000804663.1;Name=WP_000804663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001247860.1;locus_tag=AB25_RS01605;product=hypothetical protein;protein_id=WP_000804663.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 8359 8748 . + . ID=gene-AB25_RS0126685;Name=AB25_RS0126685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0126685 NZ_JJMC01000085.1 Protein Homology CDS 8359 8748 . + 0 ID=cds-WP_000833767.1;Parent=gene-AB25_RS0126685;Dbxref=GenBank:WP_000833767.1;Name=WP_000833767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000833766.1;locus_tag=AB25_RS0126685;product=hypothetical protein;protein_id=WP_000833767.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 8745 9647 . + . ID=gene-AB25_RS01600;Name=AB25_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01600;old_locus_tag=AB25_5040 NZ_JJMC01000085.1 Protein Homology CDS 8745 9647 . + 0 ID=cds-WP_000038347.1;Parent=gene-AB25_RS01600;Dbxref=GenBank:WP_000038347.1;Name=WP_000038347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000038335.1;locus_tag=AB25_RS01600;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_000038347.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 9709 9915 . + . ID=gene-AB25_RS01595;Name=AB25_RS01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01595;old_locus_tag=AB25_5041 NZ_JJMC01000085.1 Protein Homology CDS 9709 9915 . + 0 ID=cds-WP_000150314.1;Parent=gene-AB25_RS01595;Dbxref=GenBank:WP_000150314.1;Name=WP_000150314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000150315.1;locus_tag=AB25_RS01595;product=hypothetical protein;protein_id=WP_000150314.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 9946 10197 . - . ID=gene-AB25_RS01590;Name=AB25_RS01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01590;old_locus_tag=AB25_5042 NZ_JJMC01000085.1 Protein Homology CDS 9946 10197 . - 0 ID=cds-WP_000148285.1;Parent=gene-AB25_RS01590;Dbxref=GenBank:WP_000148285.1;Name=WP_000148285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003980153.1;locus_tag=AB25_RS01590;product=helix-turn-helix transcriptional regulator;protein_id=WP_000148285.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 10231 10428 . - . ID=gene-AB25_RS32855;Name=AB25_RS32855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32855;old_locus_tag=AB25_5043 NZ_JJMC01000085.1 Protein Homology CDS 10231 10428 . - 0 ID=cds-WP_032171889.1;Parent=gene-AB25_RS32855;Dbxref=GenBank:WP_032171889.1;Name=WP_032171889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001753860.1;locus_tag=AB25_RS32855;product=hypothetical protein;protein_id=WP_032171889.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 10777 11625 . + . ID=gene-AB25_RS01580;Name=AB25_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01580;old_locus_tag=AB25_5044 NZ_JJMC01000085.1 Protein Homology CDS 10777 11625 . + 0 ID=cds-WP_032171888.1;Parent=gene-AB25_RS01580;Dbxref=GenBank:WP_032171888.1;Name=WP_032171888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001401764.1;locus_tag=AB25_RS01580;product=DUF4942 domain-containing protein;protein_id=WP_032171888.1;transl_table=11 NZ_JJMC01000085.1 RefSeq pseudogene 11711 12045 . - . ID=gene-AB25_RS01575;Name=AB25_RS01575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS01575;old_locus_tag=AB25_5045;pseudo=true NZ_JJMC01000085.1 Protein Homology CDS 11711 12045 . - 0 ID=cds-AB25_RS01575;Parent=gene-AB25_RS01575;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000157082.1;locus_tag=AB25_RS01575;product=molybdopterin-guanine dinucleotide biosynthesis protein MobC;pseudo=true;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 12279 12611 . + . ID=gene-AB25_RS01570;Name=nikA;gbkey=Gene;gene=nikA;gene_biotype=protein_coding;locus_tag=AB25_RS01570;old_locus_tag=AB25_5046 NZ_JJMC01000085.1 Protein Homology CDS 12279 12611 . + 0 ID=cds-WP_001283947.1;Parent=gene-AB25_RS01570;Dbxref=GenBank:WP_001283947.1;Name=WP_001283947.1;gbkey=CDS;gene=nikA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001283947.1;locus_tag=AB25_RS01570;product=IncI1-type relaxosome accessory protein NikA;protein_id=WP_001283947.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 12622 15321 . + . ID=gene-AB25_RS01565;Name=nikB;gbkey=Gene;gene=nikB;gene_biotype=protein_coding;locus_tag=AB25_RS01565;old_locus_tag=AB25_5047 NZ_JJMC01000085.1 Protein Homology CDS 12622 15321 . + 0 ID=cds-WP_012783930.1;Parent=gene-AB25_RS01565;Dbxref=GenBank:WP_012783930.1;Name=WP_012783930.1;gbkey=CDS;gene=nikB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001387486.1;locus_tag=AB25_RS01565;product=IncI1-type relaxase NikB;protein_id=WP_012783930.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 15358 17649 . - . ID=gene-AB25_RS01560;Name=trbC;gbkey=Gene;gene=trbC;gene_biotype=protein_coding;locus_tag=AB25_RS01560;old_locus_tag=AB25_5048 NZ_JJMC01000085.1 Protein Homology CDS 15358 17649 . - 0 ID=cds-WP_012783931.1;Parent=gene-AB25_RS01560;Dbxref=GenBank:WP_012783931.1;Name=WP_012783931.1;gbkey=CDS;gene=trbC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001289278.1;locus_tag=AB25_RS01560;product=F-type conjugative transfer protein TrbC;protein_id=WP_012783931.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 17642 18712 . - . ID=gene-AB25_RS01555;Name=trbB;gbkey=Gene;gene=trbB;gene_biotype=protein_coding;locus_tag=AB25_RS01555;old_locus_tag=AB25_5049 NZ_JJMC01000085.1 Protein Homology CDS 17642 18712 . - 0 ID=cds-WP_012783932.1;Parent=gene-AB25_RS01555;Dbxref=GenBank:WP_012783932.1;Name=WP_012783932.1;gbkey=CDS;gene=trbB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000151583.1;locus_tag=AB25_RS01555;product=IncI1-type conjugal transfer protein TrbB;protein_id=WP_012783932.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 18731 19939 . - . ID=gene-AB25_RS01550;Name=trbA;gbkey=Gene;gene=trbA;gene_biotype=protein_coding;locus_tag=AB25_RS01550;old_locus_tag=AB25_5050 NZ_JJMC01000085.1 Protein Homology CDS 18731 19939 . - 0 ID=cds-WP_001303305.1;Parent=gene-AB25_RS01550;Dbxref=GenBank:WP_001303305.1;Name=WP_001303305.1;gbkey=CDS;gene=trbA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000121273.1;locus_tag=AB25_RS01550;product=IncI1-type conjugal transfer protein TrbA;protein_id=WP_001303305.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 20247 21026 . - . ID=gene-AB25_RS01545;Name=finQ;gbkey=Gene;gene=finQ;gene_biotype=protein_coding;locus_tag=AB25_RS01545;old_locus_tag=AB25_5051 NZ_JJMC01000085.1 Protein Homology CDS 20247 21026 . - 0 ID=cds-WP_275450201.1;Parent=gene-AB25_RS01545;Dbxref=GenBank:WP_275450201.1;Name=WP_275450201.1;gbkey=CDS;gene=finQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_023063753.1;locus_tag=AB25_RS01545;product=protein FinQ;protein_id=WP_275450201.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 21653 21805 . + . ID=gene-AB25_RS0126690;Name=AB25_RS0126690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0126690 NZ_JJMC01000085.1 Protein Homology CDS 21653 21805 . + 0 ID=cds-WP_001387489.1;Parent=gene-AB25_RS0126690;Dbxref=GenBank:WP_001387489.1;Name=WP_001387489.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001618166.1;locus_tag=AB25_RS0126690;product=Hok/Gef family protein;protein_id=WP_001387489.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 21877 22128 . - . ID=gene-AB25_RS01540;Name=AB25_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01540;old_locus_tag=AB25_5052 NZ_JJMC01000085.1 Protein Homology CDS 21877 22128 . - 0 ID=cds-WP_001291964.1;Parent=gene-AB25_RS01540;Dbxref=GenBank:WP_001291964.1;Name=WP_001291964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291967.1;locus_tag=AB25_RS01540;product=hypothetical protein;protein_id=WP_001291964.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 22629 22724 . + . ID=gene-AB25_RS32775;Name=dqlB;gbkey=Gene;gene=dqlB;gene_biotype=protein_coding;locus_tag=AB25_RS32775 NZ_JJMC01000085.1 Protein Homology CDS 22629 22724 . + 0 ID=cds-WP_000609148.1;Parent=gene-AB25_RS32775;Dbxref=GenBank:WP_000609148.1;Name=WP_000609148.1;gbkey=CDS;gene=dqlB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000609149.1;locus_tag=AB25_RS32775;product=DinQ-like type I toxin DqlB;protein_id=WP_000609148.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 22789 22965 . - . ID=gene-AB25_RS32115;Name=AB25_RS32115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32115;old_locus_tag=AB25_5054 NZ_JJMC01000085.1 Protein Homology CDS 22789 22965 . - 0 ID=cds-WP_001054900.1;Parent=gene-AB25_RS32115;Dbxref=GenBank:WP_001054900.1;Name=WP_001054900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001054900.1;locus_tag=AB25_RS32115;product=hypothetical protein;protein_id=WP_001054900.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 23357 23566 . + . ID=gene-AB25_RS0126705;Name=AB25_RS0126705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0126705 NZ_JJMC01000085.1 Protein Homology CDS 23357 23566 . + 0 ID=cds-WP_000062603.1;Parent=gene-AB25_RS0126705;Dbxref=GenBank:WP_000062603.1;Name=WP_000062603.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000062602.1;locus_tag=AB25_RS0126705;product=HEAT repeat domain-containing protein;protein_id=WP_000062603.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 23638 24252 . - . ID=gene-AB25_RS0126710;Name=excA;gbkey=Gene;gene=excA;gene_biotype=protein_coding;locus_tag=AB25_RS0126710 NZ_JJMC01000085.1 Protein Homology CDS 23638 24252 . - 0 ID=cds-WP_000578648.1;Parent=gene-AB25_RS0126710;Dbxref=GenBank:WP_000578648.1;Name=WP_000578648.1;gbkey=CDS;gene=excA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000578646.1;locus_tag=AB25_RS0126710;product=plasmid IncI1-type surface exclusion protein ExcA;protein_id=WP_000578648.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 24328 26496 . - . ID=gene-AB25_RS01530;Name=traY;gbkey=Gene;gene=traY;gene_biotype=protein_coding;locus_tag=AB25_RS01530;old_locus_tag=AB25_5056 NZ_JJMC01000085.1 Protein Homology CDS 24328 26496 . - 0 ID=cds-WP_000698360.1;Parent=gene-AB25_RS01530;Dbxref=GenBank:WP_000698360.1;Name=WP_000698360.1;gbkey=CDS;gene=traY;inference=COORDINATES: protein motif:HMM:TIGR04346.1;locus_tag=AB25_RS01530;product=IncI1-type conjugal transfer membrane protein TraY;protein_id=WP_000698360.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 26593 27177 . - . ID=gene-AB25_RS01525;Name=traX;gbkey=Gene;gene=traX;gene_biotype=protein_coding;locus_tag=AB25_RS01525;old_locus_tag=AB25_5057 NZ_JJMC01000085.1 Protein Homology CDS 26593 27177 . - 0 ID=cds-WP_001037993.1;Parent=gene-AB25_RS01525;Dbxref=GenBank:WP_001037993.1;Name=WP_001037993.1;gbkey=CDS;gene=traX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001037983.1;locus_tag=AB25_RS01525;product=IncI1-type conjugal transfer protein TraX;protein_id=WP_001037993.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 27206 28408 . - . ID=gene-AB25_RS01520;Name=traW;gbkey=Gene;gene=traW;gene_biotype=protein_coding;locus_tag=AB25_RS01520;old_locus_tag=AB25_5058 NZ_JJMC01000085.1 Protein Homology CDS 27206 28408 . - 0 ID=cds-WP_001189156.1;Parent=gene-AB25_RS01520;Dbxref=GenBank:WP_001189156.1;Name=WP_001189156.1;gbkey=CDS;gene=traW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001387490.1;locus_tag=AB25_RS01520;product=IncI1-type conjugal transfer protein TraW;protein_id=WP_001189156.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 28375 28989 . - . ID=gene-AB25_RS0126715;Name=traV;gbkey=Gene;gene=traV;gene_biotype=protein_coding;locus_tag=AB25_RS0126715 NZ_JJMC01000085.1 Protein Homology CDS 28375 28989 . - 0 ID=cds-WP_000337399.1;Parent=gene-AB25_RS0126715;Dbxref=GenBank:WP_000337399.1;Name=WP_000337399.1;gbkey=CDS;gene=traV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000337395.1;locus_tag=AB25_RS0126715;product=IncI1-type conjugal transfer protein TraV;protein_id=WP_000337399.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 28989 32033 . - . ID=gene-AB25_RS01515;Name=traU;gbkey=Gene;gene=traU;gene_biotype=protein_coding;locus_tag=AB25_RS01515;old_locus_tag=AB25_5060 NZ_JJMC01000085.1 Protein Homology CDS 28989 32033 . - 0 ID=cds-WP_032171885.1;Parent=gene-AB25_RS01515;Dbxref=GenBank:WP_032171885.1;Name=WP_032171885.1;gbkey=CDS;gene=traU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001024789.1;locus_tag=AB25_RS01515;product=IncI1-type conjugal transfer protein TraU;protein_id=WP_032171885.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 32123 32923 . - . ID=gene-AB25_RS01510;Name=traT;gbkey=Gene;gene=traT;gene_biotype=protein_coding;locus_tag=AB25_RS01510;old_locus_tag=AB25_5061 NZ_JJMC01000085.1 Protein Homology CDS 32123 32923 . - 0 ID=cds-WP_032171883.1;Parent=gene-AB25_RS01510;Dbxref=GenBank:WP_032171883.1;Name=WP_032171883.1;gbkey=CDS;gene=traT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001164783.1;locus_tag=AB25_RS01510;product=IncI1-type conjugal transfer protein TraT;protein_id=WP_032171883.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 32907 33095 . - . ID=gene-AB25_RS01505;Name=traS;gbkey=Gene;gene=traS;gene_biotype=protein_coding;locus_tag=AB25_RS01505;old_locus_tag=AB25_5062 NZ_JJMC01000085.1 Protein Homology CDS 32907 33095 . - 0 ID=cds-WP_001277255.1;Parent=gene-AB25_RS01505;Dbxref=GenBank:WP_001277255.1;Name=WP_001277255.1;gbkey=CDS;gene=traS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001277253.1;locus_tag=AB25_RS01505;product=putative conjugal transfer protein TraS;protein_id=WP_001277255.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 33159 33563 . - . ID=gene-AB25_RS01500;Name=traR;gbkey=Gene;gene=traR;gene_biotype=protein_coding;locus_tag=AB25_RS01500;old_locus_tag=AB25_5063 NZ_JJMC01000085.1 Protein Homology CDS 33159 33563 . - 0 ID=cds-WP_000086965.1;Parent=gene-AB25_RS01500;Dbxref=GenBank:WP_000086965.1;Name=WP_000086965.1;gbkey=CDS;gene=traR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000086965.1;locus_tag=AB25_RS01500;product=IncI1-type conjugal transfer protein TraR;protein_id=WP_000086965.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 33614 34141 . - . ID=gene-AB25_RS01495;Name=traQ;gbkey=Gene;gene=traQ;gene_biotype=protein_coding;locus_tag=AB25_RS01495;old_locus_tag=AB25_5064 NZ_JJMC01000085.1 Protein Homology CDS 33614 34141 . - 0 ID=cds-WP_001493812.1;Parent=gene-AB25_RS01495;Dbxref=GenBank:WP_001493812.1;Name=WP_001493812.1;gbkey=CDS;gene=traQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001055571.1;locus_tag=AB25_RS01495;product=conjugal transfer protein TraQ;protein_id=WP_001493812.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 34141 34845 . - . ID=gene-AB25_RS01490;Name=traP;gbkey=Gene;gene=traP;gene_biotype=protein_coding;locus_tag=AB25_RS01490;old_locus_tag=AB25_5065 NZ_JJMC01000085.1 Protein Homology CDS 34141 34845 . - 0 ID=cds-WP_001493811.1;Parent=gene-AB25_RS01490;Dbxref=GenBank:WP_001493811.1;Name=WP_001493811.1;gbkey=CDS;gene=traP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801920.1;locus_tag=AB25_RS01490;product=IncI1-type conjugal transfer protein TraP;protein_id=WP_001493811.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 34845 36134 . - . ID=gene-AB25_RS01485;Name=traO;gbkey=Gene;gene=traO;gene_biotype=protein_coding;locus_tag=AB25_RS01485;old_locus_tag=AB25_5066 NZ_JJMC01000085.1 Protein Homology CDS 34845 36134 . - 0 ID=cds-WP_001271991.1;Parent=gene-AB25_RS01485;Dbxref=GenBank:WP_001271991.1;Name=WP_001271991.1;gbkey=CDS;gene=traO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001272004.1;locus_tag=AB25_RS01485;product=conjugal transfer protein TraO;protein_id=WP_001271991.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 36137 37120 . - . ID=gene-AB25_RS01480;Name=traN;gbkey=Gene;gene=traN;gene_biotype=protein_coding;locus_tag=AB25_RS01480;old_locus_tag=AB25_5067 NZ_JJMC01000085.1 Protein Homology CDS 36137 37120 . - 0 ID=cds-WP_001191880.1;Parent=gene-AB25_RS01480;Dbxref=GenBank:WP_001191880.1;Name=WP_001191880.1;gbkey=CDS;gene=traN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001191879.1;locus_tag=AB25_RS01480;product=IncI1-type conjugal transfer protein TraN;protein_id=WP_001191880.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 37131 37823 . - . ID=gene-AB25_RS01475;Name=AB25_RS01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01475;old_locus_tag=AB25_5068 NZ_JJMC01000085.1 Protein Homology CDS 37131 37823 . - 0 ID=cds-WP_000138551.1;Parent=gene-AB25_RS01475;Dbxref=GenBank:WP_000138551.1;Name=WP_000138551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000138553.1;locus_tag=AB25_RS01475;product=DotI/IcmL family type IV secretion protein;protein_id=WP_000138551.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 37820 38167 . - . ID=gene-AB25_RS01470;Name=AB25_RS01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01470;old_locus_tag=AB25_5069 NZ_JJMC01000085.1 Protein Homology CDS 37820 38167 . - 0 ID=cds-WP_001055900.1;Parent=gene-AB25_RS01470;Dbxref=GenBank:WP_001055900.1;Name=WP_001055900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001629514.1;locus_tag=AB25_RS01470;product=conjugal transfer protein;protein_id=WP_001055900.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 38185 41952 . - . ID=gene-AB25_RS01465;Name=AB25_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01465;old_locus_tag=AB25_5070 NZ_JJMC01000085.1 Protein Homology CDS 38185 41952 . - 0 ID=cds-WP_032171881.1;Parent=gene-AB25_RS01465;Dbxref=GenBank:WP_032171881.1;Name=WP_032171881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016231897.1;locus_tag=AB25_RS01465;product=LPD7 domain-containing protein;protein_id=WP_032171881.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 42042 42593 . - . ID=gene-AB25_RS01460;Name=AB25_RS01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01460;old_locus_tag=AB25_5072 NZ_JJMC01000085.1 Protein Homology CDS 42042 42593 . - 0 ID=cds-WP_012783942.1;Parent=gene-AB25_RS01460;Dbxref=GenBank:WP_012783942.1;Name=WP_012783942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001493807.1;locus_tag=AB25_RS01460;product=phospholipase D family protein;protein_id=WP_012783942.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 42608 42898 . - . ID=gene-AB25_RS29495;Name=AB25_RS29495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS29495;old_locus_tag=AB25_5073 NZ_JJMC01000085.1 Protein Homology CDS 42608 42898 . - 0 ID=cds-WP_001314267.1;Parent=gene-AB25_RS29495;Dbxref=GenBank:WP_001314267.1;Name=WP_001314267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542523.1;locus_tag=AB25_RS29495;product=hypothetical protein;protein_id=WP_001314267.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 42895 44043 . - . ID=gene-AB25_RS01455;Name=traJ;gbkey=Gene;gene=traJ;gene_biotype=protein_coding;locus_tag=AB25_RS01455;old_locus_tag=AB25_5074 NZ_JJMC01000085.1 Protein Homology CDS 42895 44043 . - 0 ID=cds-WP_032171879.1;Parent=gene-AB25_RS01455;Dbxref=GenBank:WP_032171879.1;Name=WP_032171879.1;gbkey=CDS;gene=traJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001480051.1;locus_tag=AB25_RS01455;product=plasmid transfer ATPase TraJ;protein_id=WP_032171879.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 44040 44858 . - . ID=gene-AB25_RS01450;Name=traI;gbkey=Gene;gene=traI;gene_biotype=protein_coding;locus_tag=AB25_RS01450;old_locus_tag=AB25_5075 NZ_JJMC01000085.1 Protein Homology CDS 44040 44858 . - 0 ID=cds-WP_014065734.1;Parent=gene-AB25_RS01450;Dbxref=GenBank:WP_014065734.1;Name=WP_014065734.1;gbkey=CDS;gene=traI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646098.1;locus_tag=AB25_RS01450;product=IncI1-type conjugal transfer lipoprotein TraI;protein_id=WP_014065734.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 44855 45313 . - . ID=gene-AB25_RS01445;Name=traH;gbkey=Gene;gene=traH;gene_biotype=protein_coding;locus_tag=AB25_RS01445;old_locus_tag=AB25_5076 NZ_JJMC01000085.1 Protein Homology CDS 44855 45313 . - 0 ID=cds-WP_001079808.1;Parent=gene-AB25_RS01445;Dbxref=GenBank:WP_001079808.1;Name=WP_001079808.1;gbkey=CDS;gene=traH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001079808.1;locus_tag=AB25_RS01445;product=IncI1-type conjugal transfer lipoprotein TraH;protein_id=WP_001079808.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 45707 46291 . - . ID=gene-AB25_RS01440;Name=AB25_RS01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01440;old_locus_tag=AB25_5077 NZ_JJMC01000085.1 Protein Homology CDS 45707 46291 . - 0 ID=cds-WP_000977522.1;Parent=gene-AB25_RS01440;Dbxref=GenBank:WP_000977522.1;Name=WP_000977522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542524.1;locus_tag=AB25_RS01440;product=histidine phosphatase family protein;protein_id=WP_000977522.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 46351 47553 . - . ID=gene-AB25_RS01435;Name=AB25_RS01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01435;old_locus_tag=AB25_5078 NZ_JJMC01000085.1 Protein Homology CDS 46351 47553 . - 0 ID=cds-WP_032171877.1;Parent=gene-AB25_RS01435;Dbxref=GenBank:WP_032171877.1;Name=WP_032171877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003557916.1;locus_tag=AB25_RS01435;product=conjugal transfer protein TraF;protein_id=WP_032171877.1;transl_table=11 NZ_JJMC01000085.1 RefSeq gene 47639 48463 . - . ID=gene-AB25_RS01430;Name=traE;gbkey=Gene;gene=traE;gene_biotype=protein_coding;locus_tag=AB25_RS01430;old_locus_tag=AB25_5079 NZ_JJMC01000085.1 Protein Homology CDS 47639 48463 . - 0 ID=cds-WP_014065736.1;Parent=gene-AB25_RS01430;Dbxref=GenBank:WP_014065736.1;Name=WP_014065736.1;gbkey=CDS;gene=traE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001238927.1;locus_tag=AB25_RS01430;product=conjugal transfer protein TraE;protein_id=WP_014065736.1;transl_table=11 ##sequence-region NZ_JJMC01000086.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000086.1 RefSeq region 1 2047 . + . ID=NZ_JJMC01000086.1:1..2047;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000086.1 RefSeq gene 1 260 . + . ID=gene-AB25_RS32120;Name=AB25_RS32120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32120;partial=true;start_range=.,1 NZ_JJMC01000086.1 Protein Homology CDS 1 260 . + 2 ID=cds-WP_001334651.1;Parent=gene-AB25_RS32120;Dbxref=GenBank:WP_001334651.1;Name=WP_001334651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001566573.1;locus_tag=AB25_RS32120;partial=true;product=hypothetical protein;protein_id=WP_001334651.1;start_range=.,1;transl_table=11 NZ_JJMC01000086.1 RefSeq gene 262 1596 . - . ID=gene-AB25_RS01425;Name=AB25_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01425;old_locus_tag=AB25_5080 NZ_JJMC01000086.1 Protein Homology CDS 262 1596 . - 0 ID=cds-WP_024132209.1;Parent=gene-AB25_RS01425;Dbxref=GenBank:WP_024132209.1;Name=WP_024132209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_024132209.1;locus_tag=AB25_RS01425;product=shufflon system plasmid conjugative transfer pilus tip adhesin PilV;protein_id=WP_024132209.1;transl_table=11 NZ_JJMC01000086.1 RefSeq gene 1596 2047 . - . ID=gene-AB25_RS29505;Name=AB25_RS29505;end_range=2047,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS29505;old_locus_tag=AB25_5081;partial=true NZ_JJMC01000086.1 Protein Homology CDS 1596 2047 . - 2 ID=cds-WP_071999016.1;Parent=gene-AB25_RS29505;Dbxref=GenBank:WP_071999016.1;Name=WP_071999016.1;Ontology_term=GO:0004190,GO:0016020;end_range=2047,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001193550.1;locus_tag=AB25_RS29505;partial=true;product=prepilin peptidase;protein_id=WP_071999016.1;transl_table=11 ##sequence-region NZ_JJMC01000087.1 1 641 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000087.1 RefSeq region 1 641 . + . ID=NZ_JJMC01000087.1:1..641;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000087.1 RefSeq gene 1 371 . - . ID=gene-AB25_RS01420;Name=AB25_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01420;old_locus_tag=AB25_5082;partial=true;start_range=.,1 NZ_JJMC01000087.1 Protein Homology CDS 1 371 . - 0 ID=cds-WP_032296167.1;Parent=gene-AB25_RS01420;Dbxref=GenBank:WP_032296167.1;Name=WP_032296167.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025306.1;locus_tag=AB25_RS01420;partial=true;product=MFS transporter;protein_id=WP_032296167.1;start_range=.,1;transl_table=11 NZ_JJMC01000087.1 RefSeq gene 484 641 . + . ID=gene-AB25_RS29510;Name=AB25_RS29510;end_range=641,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS29510;old_locus_tag=AB25_5083;partial=true NZ_JJMC01000087.1 Protein Homology CDS 484 641 . + 0 ID=cds-WP_001505255.1;Parent=gene-AB25_RS29510;Dbxref=GenBank:WP_001505255.1;Name=WP_001505255.1;Ontology_term=GO:0006355,GO:0003700;end_range=641,.;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020236337.1;locus_tag=AB25_RS29510;partial=true;product=LysR family transcriptional regulator;protein_id=WP_001505255.1;transl_table=11 ##sequence-region NZ_JJMC01000088.1 1 2479 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000088.1 RefSeq region 1 2479 . + . ID=NZ_JJMC01000088.1:1..2479;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000088.1 RefSeq gene 1 597 . - . ID=gene-AB25_RS01415;Name=traE;gbkey=Gene;gene=traE;gene_biotype=protein_coding;locus_tag=AB25_RS01415;old_locus_tag=AB25_5084;partial=true;start_range=.,1 NZ_JJMC01000088.1 Protein Homology CDS 1 597 . - 0 ID=cds-WP_032171714.1;Parent=gene-AB25_RS01415;Dbxref=GenBank:WP_032171714.1;Name=WP_032171714.1;gbkey=CDS;gene=traE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001238927.1;locus_tag=AB25_RS01415;partial=true;product=conjugal transfer protein TraE;protein_id=WP_032171714.1;start_range=.,1;transl_table=11 NZ_JJMC01000088.1 RefSeq gene 748 1902 . - . ID=gene-AB25_RS01410;Name=AB25_RS01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01410;old_locus_tag=AB25_5085 NZ_JJMC01000088.1 Protein Homology CDS 748 1902 . - 0 ID=cds-WP_001139958.1;Parent=gene-AB25_RS01410;Dbxref=GenBank:WP_001139958.1;Name=WP_001139958.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396170.1;locus_tag=AB25_RS01410;product=tyrosine-type recombinase/integrase;protein_id=WP_001139958.1;transl_table=11 ##sequence-region NZ_JJMC01000089.1 1 1842 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000089.1 RefSeq region 1 1842 . + . ID=NZ_JJMC01000089.1:1..1842;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000089.1 RefSeq gene 1 174 . - . ID=gene-AB25_RS01400;Name=AB25_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01400;old_locus_tag=AB25_5087;partial=true;start_range=.,1 NZ_JJMC01000089.1 Protein Homology CDS 1 174 . - 0 ID=cds-WP_032296169.1;Parent=gene-AB25_RS01400;Dbxref=GenBank:WP_032296169.1;Name=WP_032296169.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312734.1;locus_tag=AB25_RS01400;partial=true;product=LysR family transcriptional regulator;protein_id=WP_032296169.1;start_range=.,1;transl_table=11 NZ_JJMC01000089.1 RefSeq gene 324 1799 . + . ID=gene-AB25_RS01395;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=AB25_RS01395;old_locus_tag=AB25_5088 NZ_JJMC01000089.1 Protein Homology CDS 324 1799 . + 0 ID=cds-WP_001356300.1-2;Parent=gene-AB25_RS01395;Dbxref=GenBank:WP_001356300.1;Name=WP_001356300.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=AB25_RS01395;product=ketol-acid reductoisomerase;protein_id=WP_001356300.1;transl_table=11 ##sequence-region NZ_JJMC01000090.1 1 1308 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000090.1 RefSeq region 1 1308 . + . ID=NZ_JJMC01000090.1:1..1308;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000090.1 RefSeq gene 385 1257 . - . ID=gene-AB25_RS01390;Name=AB25_RS01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01390;old_locus_tag=AB25_5090 NZ_JJMC01000090.1 Protein Homology CDS 385 1257 . - 0 ID=cds-WP_032177942.1;Parent=gene-AB25_RS01390;Dbxref=GenBank:WP_032177942.1;Name=WP_032177942.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309422.1;locus_tag=AB25_RS01390;product=GTPase family protein;protein_id=WP_032177942.1;transl_table=11 ##sequence-region NZ_JJMC01000091.1 1 2455 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000091.1 RefSeq region 1 2455 . + . ID=NZ_JJMC01000091.1:1..2455;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000091.1 RefSeq gene 1 581 . + . ID=gene-AB25_RS01385;Name=AB25_RS01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01385;old_locus_tag=AB25_5091;partial=true;start_range=.,1 NZ_JJMC01000091.1 Protein Homology CDS 1 581 . + 2 ID=cds-WP_032296170.1;Parent=gene-AB25_RS01385;Dbxref=GenBank:WP_032296170.1;Name=WP_032296170.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312927.1;locus_tag=AB25_RS01385;partial=true;product=biotin--[acetyl-CoA-carboxylase] ligase;protein_id=WP_032296170.1;start_range=.,1;transl_table=11 NZ_JJMC01000091.1 RefSeq gene 610 1560 . - . ID=gene-AB25_RS01380;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=AB25_RS01380;old_locus_tag=AB25_5092 NZ_JJMC01000091.1 Protein Homology CDS 610 1560 . - 0 ID=cds-WP_000023081.1-2;Parent=gene-AB25_RS01380;Dbxref=GenBank:WP_000023081.1;Name=WP_000023081.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418405.1;locus_tag=AB25_RS01380;product=type I pantothenate kinase;protein_id=WP_000023081.1;transl_table=11 NZ_JJMC01000091.1 RefSeq gene 1922 1997 . + . ID=gene-AB25_RS01375;Name=AB25_RS01375;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS01375;old_locus_tag=AB25_5093 NZ_JJMC01000091.1 tRNAscan-SE tRNA 1922 1997 . + . ID=rna-AB25_RS01375;Parent=gene-AB25_RS01375;anticodon=(pos:1955..1957);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS01375;product=tRNA-Thr NZ_JJMC01000091.1 tRNAscan-SE exon 1922 1997 . + . ID=exon-AB25_RS01375-1;Parent=rna-AB25_RS01375;anticodon=(pos:1955..1957);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS01375;product=tRNA-Thr NZ_JJMC01000091.1 RefSeq gene 2001 2075 . + . ID=gene-AB25_RS01370;Name=AB25_RS01370;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS01370;old_locus_tag=AB25_5094 NZ_JJMC01000091.1 tRNAscan-SE tRNA 2001 2075 . + . ID=rna-AB25_RS01370;Parent=gene-AB25_RS01370;anticodon=(pos:2034..2036);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS01370;product=tRNA-Gly NZ_JJMC01000091.1 tRNAscan-SE exon 2001 2075 . + . ID=exon-AB25_RS01370-1;Parent=rna-AB25_RS01370;anticodon=(pos:2034..2036);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS01370;product=tRNA-Gly NZ_JJMC01000091.1 RefSeq gene 2082 2157 . + . ID=gene-AB25_RS01365;Name=AB25_RS01365;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS01365;old_locus_tag=AB25_5095 NZ_JJMC01000091.1 tRNAscan-SE tRNA 2082 2157 . + . ID=rna-AB25_RS01365;Parent=gene-AB25_RS01365;anticodon=(pos:2115..2117);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS01365;product=tRNA-Thr NZ_JJMC01000091.1 tRNAscan-SE exon 2082 2157 . + . ID=exon-AB25_RS01365-1;Parent=rna-AB25_RS01365;anticodon=(pos:2115..2117);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS01365;product=tRNA-Thr NZ_JJMC01000091.1 RefSeq gene 2272 2455 . + . ID=gene-AB25_RS01360;Name=AB25_RS01360;end_range=2455,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01360;old_locus_tag=AB25_5096;partial=true NZ_JJMC01000091.1 Protein Homology CDS 2272 2455 . + 0 ID=cds-WP_016505062.1;Parent=gene-AB25_RS01360;Dbxref=GenBank:WP_016505062.1;Name=WP_016505062.1;Ontology_term=GO:0003924,GO:0005525;end_range=2455,.;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=AB25_RS01360;partial=true;product=GTP-binding protein;protein_id=WP_016505062.1;transl_table=11 ##sequence-region NZ_JJMC01000092.1 1 1490 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000092.1 RefSeq region 1 1490 . + . ID=NZ_JJMC01000092.1:1..1490;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000092.1 RefSeq pseudogene 1 350 . + . ID=gene-AB25_RS01355;Name=AB25_RS01355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS01355;old_locus_tag=AB25_5097;partial=true;pseudo=true;start_range=.,1 NZ_JJMC01000092.1 Protein Homology CDS 1 350 . + 2 ID=cds-AB25_RS01355;Parent=gene-AB25_RS01355;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=AB25_RS01355;partial=true;product=IS6-like element IS26 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJMC01000092.1 RefSeq pseudogene 408 806 . - . ID=gene-AB25_RS01350;Name=AB25_RS01350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS01350;old_locus_tag=AB25_5098;partial=true;pseudo=true;start_range=.,408 NZ_JJMC01000092.1 Protein Homology CDS 408 806 . - 0 ID=cds-AB25_RS01350;Parent=gene-AB25_RS01350;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001067784.1;locus_tag=AB25_RS01350;partial=true;product=IS6-like element IS26 family transposase;pseudo=true;start_range=.,408;transl_table=11 NZ_JJMC01000092.1 RefSeq gene 938 1490 . + . ID=gene-AB25_RS01345;Name=bla;end_range=1490,.;gbkey=Gene;gene=bla;gene_biotype=protein_coding;locus_tag=AB25_RS01345;old_locus_tag=AB25_5099;partial=true NZ_JJMC01000092.1 Protein Homology CDS 938 1490 . + 0 ID=cds-WP_032171651.1;Parent=gene-AB25_RS01345;Dbxref=GenBank:WP_032171651.1;Name=WP_032171651.1;Ontology_term=GO:0030655,GO:0046677,GO:0008800;end_range=1490,.;gbkey=CDS;gene=bla;go_function=beta-lactamase activity|0008800||IEA;go_process=beta-lactam antibiotic catabolic process|0030655||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032489893.1;locus_tag=AB25_RS01345;partial=true;product=class A beta-lactamase;protein_id=WP_032171651.1;transl_table=11 ##sequence-region NZ_JJMC01000093.1 1 5720 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000093.1 RefSeq region 1 5720 . + . ID=NZ_JJMC01000093.1:1..5720;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000093.1 RefSeq gene 1 1326 . - . ID=gene-AB25_RS01340;Name=AB25_RS01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01340;old_locus_tag=AB25_5100;partial=true;start_range=.,1 NZ_JJMC01000093.1 Protein Homology CDS 1 1326 . - 0 ID=cds-WP_032295929.1-2;Parent=gene-AB25_RS01340;Dbxref=GenBank:WP_032295929.1;Name=WP_032295929.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707145.1;locus_tag=AB25_RS01340;partial=true;product=IS4 family transposase;protein_id=WP_032295929.1;start_range=.,1;transl_table=11 NZ_JJMC01000093.1 RefSeq gene 1935 3152 . + . ID=gene-AB25_RS01335;Name=AB25_RS01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01335;old_locus_tag=AB25_5102 NZ_JJMC01000093.1 Protein Homology CDS 1935 3152 . + 0 ID=cds-WP_000179691.1;Parent=gene-AB25_RS01335;Dbxref=GenBank:WP_000179691.1;Name=WP_000179691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418699.4;locus_tag=AB25_RS01335;product=MFS transporter;protein_id=WP_000179691.1;transl_table=11 NZ_JJMC01000093.1 RefSeq gene 3164 4282 . + . ID=gene-AB25_RS01330;Name=nanY;gbkey=Gene;gene=nanY;gene_biotype=protein_coding;gene_synonym=yjhC;locus_tag=AB25_RS01330;old_locus_tag=AB25_5103 NZ_JJMC01000093.1 Protein Homology CDS 3164 4282 . + 0 ID=cds-WP_000611568.1;Parent=gene-AB25_RS01330;Dbxref=GenBank:WP_000611568.1;Name=WP_000611568.1;gbkey=CDS;gene=nanY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418700.2;locus_tag=AB25_RS01330;product=2%2C7-anhydro-N-acetylneuraminate hydratase;protein_id=WP_000611568.1;transl_table=11 NZ_JJMC01000093.1 RefSeq gene 4325 4450 . + . ID=gene-AB25_RS30740;Name=ythA;gbkey=Gene;gene=ythA;gene_biotype=protein_coding;locus_tag=AB25_RS30740 NZ_JJMC01000093.1 Protein Homology CDS 4325 4450 . + 0 ID=cds-WP_000594405.1;Parent=gene-AB25_RS30740;Dbxref=GenBank:WP_000594405.1;Name=WP_000594405.1;gbkey=CDS;gene=ythA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001491548.1;locus_tag=AB25_RS30740;product=protein YthA;protein_id=WP_000594405.1;transl_table=11 NZ_JJMC01000093.1 RefSeq gene 4503 4760 . - . ID=gene-AB25_RS01325;Name=AB25_RS01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01325;old_locus_tag=AB25_5104 NZ_JJMC01000093.1 Protein Homology CDS 4503 4760 . - 0 ID=cds-WP_032171671.1;Parent=gene-AB25_RS01325;Dbxref=GenBank:WP_032171671.1;Name=WP_032171671.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028057.6;locus_tag=AB25_RS01325;product=surface-adhesin E family protein;protein_id=WP_032171671.1;transl_table=11 NZ_JJMC01000093.1 RefSeq gene 4783 4986 . + . ID=gene-AB25_RS31470;Name=AB25_RS31470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31470;old_locus_tag=AB25_5105 NZ_JJMC01000093.1 Protein Homology CDS 4783 4986 . + 0 ID=cds-WP_000355616.1;Parent=gene-AB25_RS31470;Dbxref=GenBank:WP_000355616.1;Name=WP_000355616.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023128.6;locus_tag=AB25_RS31470;product=MFS transporter;protein_id=WP_000355616.1;transl_table=11 NZ_JJMC01000093.1 RefSeq pseudogene 5074 5720 . + . ID=gene-AB25_RS30745;Name=AB25_RS30745;end_range=5720,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS30745;partial=true;pseudo=true NZ_JJMC01000093.1 Protein Homology CDS 5074 5720 . + 0 ID=cds-AB25_RS30745;Parent=gene-AB25_RS30745;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=5720,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611483.1;locus_tag=AB25_RS30745;partial=true;product=IS3-like element IS911 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJMC01000094.1 1 1487 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000094.1 RefSeq region 1 1487 . + . ID=NZ_JJMC01000094.1:1..1487;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000094.1 RefSeq gene 1 139 . + . ID=gene-AB25_RS27265;Name=AB25_RS27265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS27265;old_locus_tag=AB25_5108;partial=true;start_range=.,1 NZ_JJMC01000094.1 Protein Homology CDS 1 139 . + 1 ID=cds-WP_175566803.1;Parent=gene-AB25_RS27265;Dbxref=GenBank:WP_175566803.1;Name=WP_175566803.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309762.1;locus_tag=AB25_RS27265;partial=true;product=SEC-C metal-binding domain-containing protein;protein_id=WP_175566803.1;start_range=.,1;transl_table=11 NZ_JJMC01000094.1 RefSeq gene 189 1031 . + . ID=gene-AB25_RS01310;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=AB25_RS01310;old_locus_tag=AB25_5109 NZ_JJMC01000094.1 Protein Homology CDS 189 1031 . + 0 ID=cds-WP_000555849.1-2;Parent=gene-AB25_RS01310;Dbxref=GenBank:WP_000555849.1;Name=WP_000555849.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707138.1;locus_tag=AB25_RS01310;product=formyltetrahydrofolate deformylase;protein_id=WP_000555849.1;transl_table=11 NZ_JJMC01000094.1 RefSeq gene 1191 1275 . + . ID=gene-AB25_RS01305;Name=AB25_RS01305;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS01305;old_locus_tag=AB25_5110 NZ_JJMC01000094.1 tRNAscan-SE tRNA 1191 1275 . + . ID=rna-AB25_RS01305;Parent=gene-AB25_RS01305;anticodon=(pos:1225..1227);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS01305;product=tRNA-Tyr NZ_JJMC01000094.1 tRNAscan-SE exon 1191 1275 . + . ID=exon-AB25_RS01305-1;Parent=rna-AB25_RS01305;anticodon=(pos:1225..1227);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS01305;product=tRNA-Tyr NZ_JJMC01000094.1 RefSeq gene 1310 1394 . + . ID=gene-AB25_RS01300;Name=AB25_RS01300;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS01300;old_locus_tag=AB25_5111 NZ_JJMC01000094.1 tRNAscan-SE tRNA 1310 1394 . + . ID=rna-AB25_RS01300;Parent=gene-AB25_RS01300;anticodon=(pos:1344..1346);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS01300;product=tRNA-Tyr NZ_JJMC01000094.1 tRNAscan-SE exon 1310 1394 . + . ID=exon-AB25_RS01300-1;Parent=rna-AB25_RS01300;anticodon=(pos:1344..1346);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS01300;product=tRNA-Tyr NZ_JJMC01000094.1 RefSeq pseudogene 1376 1487 . - . ID=gene-AB25_RS32780;Name=AB25_RS32780;end_range=1487,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32780;partial=true;pseudo=true;start_range=.,1376 NZ_JJMC01000094.1 Protein Homology CDS 1376 1487 . - 1 ID=cds-AB25_RS32780;Parent=gene-AB25_RS32780;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1487,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518769.1;locus_tag=AB25_RS32780;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1376;transl_table=11 ##sequence-region NZ_JJMC01000095.1 1 3525 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000095.1 RefSeq region 1 3525 . + . ID=NZ_JJMC01000095.1:1..3525;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000095.1 RefSeq pseudogene 1 888 . - . ID=gene-AB25_RS32125;Name=AB25_RS32125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32125;partial=true;pseudo=true;start_range=.,1 NZ_JJMC01000095.1 Protein Homology CDS 1 888 . - 0 ID=cds-AB25_RS32125;Parent=gene-AB25_RS32125;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611997.1;locus_tag=AB25_RS32125;partial=true;product=IS3-like element IS600 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJMC01000095.1 RefSeq pseudogene 955 1260 . + . ID=gene-AB25_RS27425;Name=AB25_RS27425;end_range=1260,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS27425;partial=true;pseudo=true;start_range=.,955 NZ_JJMC01000095.1 Protein Homology CDS 955 1260 . + 0 ID=cds-AB25_RS27425;Parent=gene-AB25_RS27425;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1260,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611483.1;locus_tag=AB25_RS27425;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,955;transl_table=11 NZ_JJMC01000095.1 RefSeq gene 1933 3441 . + . ID=gene-AB25_RS01285;Name=ltrA;gbkey=Gene;gene=ltrA;gene_biotype=protein_coding;locus_tag=AB25_RS01285;old_locus_tag=AB25_5115 NZ_JJMC01000095.1 Protein Homology CDS 1933 3441 . + 0 ID=cds-WP_001189123.1-3;Parent=gene-AB25_RS01285;Dbxref=GenBank:WP_001189123.1;Name=WP_001189123.1;Ontology_term=GO:0000373,GO:0003964;gbkey=CDS;gene=ltrA;go_function=RNA-directed DNA polymerase activity|0003964||IEA;go_process=Group II intron splicing|0000373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708749.1;locus_tag=AB25_RS01285;product=group II intron reverse transcriptase/maturase;protein_id=WP_001189123.1;transl_table=11 ##sequence-region NZ_JJMC01000096.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000096.1 RefSeq region 1 2047 . + . ID=NZ_JJMC01000096.1:1..2047;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000096.1 RefSeq pseudogene 1 388 . - . ID=gene-AB25_RS01280;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=pseudogene;locus_tag=AB25_RS01280;old_locus_tag=AB25_5116;partial=true;pseudo=true;start_range=.,1 NZ_JJMC01000096.1 Protein Homology CDS 1 388 . - 0 ID=cds-AB25_RS01280;Parent=gene-AB25_RS01280;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=pnuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308806.1;locus_tag=AB25_RS01280;partial=true;product=nicotinamide riboside transporter PnuC;pseudo=true;start_range=.,1;transl_table=11 NZ_JJMC01000096.1 RefSeq gene 426 1469 . - . ID=gene-AB25_RS01275;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=AB25_RS01275;old_locus_tag=AB25_5117 NZ_JJMC01000096.1 Protein Homology CDS 426 1469 . - 0 ID=cds-WP_000115301.1;Parent=gene-AB25_RS01275;Dbxref=GenBank:WP_000115301.1;Name=WP_000115301.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415271.1;locus_tag=AB25_RS01275;product=quinolinate synthase NadA;protein_id=WP_000115301.1;transl_table=11 NZ_JJMC01000096.1 RefSeq gene 1718 1843 . - . ID=gene-AB25_RS27430;Name=AB25_RS27430;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AB25_RS27430 NZ_JJMC01000096.1 cmsearch ncRNA 1718 1843 . - . ID=rna-AB25_RS27430;Parent=gene-AB25_RS27430;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS27430;product=RtT sRNA NZ_JJMC01000096.1 cmsearch exon 1718 1843 . - . ID=exon-AB25_RS27430-1;Parent=rna-AB25_RS27430;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS27430;product=RtT sRNA NZ_JJMC01000096.1 RefSeq gene 1874 1999 . - . ID=gene-AB25_RS27435;Name=AB25_RS27435;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AB25_RS27435 NZ_JJMC01000096.1 cmsearch ncRNA 1874 1999 . - . ID=rna-AB25_RS27435;Parent=gene-AB25_RS27435;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS27435;product=RtT sRNA NZ_JJMC01000096.1 cmsearch exon 1874 1999 . - . ID=exon-AB25_RS27435-1;Parent=rna-AB25_RS27435;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS27435;product=RtT sRNA ##sequence-region NZ_JJMC01000097.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000097.1 RefSeq region 1 2047 . + . ID=NZ_JJMC01000097.1:1..2047;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000097.1 RefSeq gene 1 440 . + . ID=gene-AB25_RS01270;Name=AB25_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01270;old_locus_tag=AB25_5118;partial=true;start_range=.,1 NZ_JJMC01000097.1 Protein Homology CDS 1 440 . + 2 ID=cds-WP_032171761.1;Parent=gene-AB25_RS01270;Dbxref=GenBank:WP_032171761.1;Name=WP_032171761.1;Ontology_term=GO:0004190,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001193550.1;locus_tag=AB25_RS01270;partial=true;product=prepilin peptidase;protein_id=WP_032171761.1;start_range=.,1;transl_table=11 NZ_JJMC01000097.1 RefSeq gene 440 1732 . + . ID=gene-AB25_RS01265;Name=AB25_RS01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01265;old_locus_tag=AB25_5119 NZ_JJMC01000097.1 Protein Homology CDS 440 1732 . + 0 ID=cds-WP_001417545.1;Parent=gene-AB25_RS01265;Dbxref=GenBank:WP_001417545.1;Name=WP_001417545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012565250.1;locus_tag=AB25_RS01265;product=shufflon system plasmid conjugative transfer pilus tip adhesin PilV;protein_id=WP_001417545.1;transl_table=11 NZ_JJMC01000097.1 RefSeq gene 1729 2047 . - . ID=gene-AB25_RS29560;Name=AB25_RS29560;end_range=2047,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS29560;old_locus_tag=AB25_5120;partial=true NZ_JJMC01000097.1 Protein Homology CDS 1729 2047 . - 1 ID=cds-WP_077757199.1;Parent=gene-AB25_RS29560;Dbxref=GenBank:WP_077757199.1;Name=WP_077757199.1;end_range=2047,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392640.1;locus_tag=AB25_RS29560;partial=true;product=hypothetical protein;protein_id=WP_077757199.1;transl_table=11 ##sequence-region NZ_JJMC01000098.1 1 20962 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000098.1 RefSeq region 1 20962 . + . ID=NZ_JJMC01000098.1:1..20962;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000098.1 RefSeq gene 1207 1509 . - . ID=gene-AB25_RS01255;Name=AB25_RS01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01255;old_locus_tag=AB25_5122 NZ_JJMC01000098.1 Protein Homology CDS 1207 1509 . - 0 ID=cds-WP_001096511.1;Parent=gene-AB25_RS01255;Dbxref=GenBank:WP_001096511.1;Name=WP_001096511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096506.1;locus_tag=AB25_RS01255;product=hypothetical protein;protein_id=WP_001096511.1;transl_table=11 NZ_JJMC01000098.1 RefSeq gene 1599 2258 . - . ID=gene-AB25_RS01250;Name=AB25_RS01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01250;old_locus_tag=AB25_5123 NZ_JJMC01000098.1 Protein Homology CDS 1599 2258 . - 0 ID=cds-WP_000516232.1;Parent=gene-AB25_RS01250;Dbxref=GenBank:WP_000516232.1;Name=WP_000516232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000516228.1;locus_tag=AB25_RS01250;product=AAA family ATPase;protein_id=WP_000516232.1;transl_table=11 NZ_JJMC01000098.1 RefSeq gene 2811 3134 . + . ID=gene-AB25_RS01245;Name=AB25_RS01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01245;old_locus_tag=AB25_5124 NZ_JJMC01000098.1 Protein Homology CDS 2811 3134 . + 0 ID=cds-WP_000432873.1;Parent=gene-AB25_RS01245;Dbxref=GenBank:WP_000432873.1;Name=WP_000432873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000432874.1;locus_tag=AB25_RS01245;product=hypothetical protein;protein_id=WP_000432873.1;transl_table=11 NZ_JJMC01000098.1 RefSeq gene 3488 3832 . + . ID=gene-AB25_RS01240;Name=AB25_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01240;old_locus_tag=AB25_5125 NZ_JJMC01000098.1 Protein Homology CDS 3488 3832 . + 0 ID=cds-WP_001146936.1;Parent=gene-AB25_RS01240;Dbxref=GenBank:WP_001146936.1;Name=WP_001146936.1;Ontology_term=GO:0008219,GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;go_process=cell death|0008219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004026082.1;locus_tag=AB25_RS01240;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_001146936.1;transl_table=11 NZ_JJMC01000098.1 RefSeq gene 3819 4169 . + . ID=gene-AB25_RS01235;Name=AB25_RS01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01235;old_locus_tag=AB25_5126 NZ_JJMC01000098.1 Protein Homology CDS 3819 4169 . + 0 ID=cds-WP_000127482.1;Parent=gene-AB25_RS01235;Dbxref=GenBank:WP_000127482.1;Name=WP_000127482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000127484.1;locus_tag=AB25_RS01235;product=DNA-binding protein;protein_id=WP_000127482.1;transl_table=11 NZ_JJMC01000098.1 RefSeq gene 5003 5518 . + . ID=gene-AB25_RS01230;Name=AB25_RS01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01230;old_locus_tag=AB25_5127 NZ_JJMC01000098.1 Protein Homology CDS 5003 5518 . + 0 ID=cds-WP_001025393.1;Parent=gene-AB25_RS01230;Dbxref=GenBank:WP_001025393.1;Name=WP_001025393.1;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025391.1;locus_tag=AB25_RS01230;product=J domain-containing protein;protein_id=WP_001025393.1;transl_table=11 NZ_JJMC01000098.1 RefSeq gene 5622 6164 . + . ID=gene-AB25_RS01225;Name=AB25_RS01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01225;old_locus_tag=AB25_5128 NZ_JJMC01000098.1 Protein Homology CDS 5622 6164 . + 0 ID=cds-WP_001083904.1;Parent=gene-AB25_RS01225;Dbxref=GenBank:WP_001083904.1;Name=WP_001083904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001401654.1;locus_tag=AB25_RS01225;product=hypothetical protein;protein_id=WP_001083904.1;transl_table=11 NZ_JJMC01000098.1 RefSeq gene 6161 6415 . + . ID=gene-AB25_RS01220;Name=AB25_RS01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01220;old_locus_tag=AB25_5129 NZ_JJMC01000098.1 Protein Homology CDS 6161 6415 . + 0 ID=cds-WP_001230709.1;Parent=gene-AB25_RS01220;Dbxref=GenBank:WP_001230709.1;Name=WP_001230709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001230709.1;locus_tag=AB25_RS01220;product=hypothetical protein;protein_id=WP_001230709.1;transl_table=11 NZ_JJMC01000098.1 RefSeq gene 6412 6654 . + . ID=gene-AB25_RS01215;Name=AB25_RS01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01215;old_locus_tag=AB25_5130 NZ_JJMC01000098.1 Protein Homology CDS 6412 6654 . + 0 ID=cds-WP_000151456.1;Parent=gene-AB25_RS01215;Dbxref=GenBank:WP_000151456.1;Name=WP_000151456.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000151456.1;locus_tag=AB25_RS01215;product=hypothetical protein;protein_id=WP_000151456.1;transl_table=11 NZ_JJMC01000098.1 RefSeq gene 7225 7518 . + . ID=gene-AB25_RS0126745;Name=AB25_RS0126745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0126745 NZ_JJMC01000098.1 Protein Homology CDS 7225 7518 . + 0 ID=cds-WP_000673431.1;Parent=gene-AB25_RS0126745;Dbxref=GenBank:WP_000673431.1;Name=WP_000673431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000673428.1;locus_tag=AB25_RS0126745;product=hypothetical protein;protein_id=WP_000673431.1;transl_table=11 NZ_JJMC01000098.1 RefSeq gene 7823 8110 . + . ID=gene-AB25_RS01210;Name=AB25_RS01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01210;old_locus_tag=AB25_5134 NZ_JJMC01000098.1 Protein Homology CDS 7823 8110 . + 0 ID=cds-WP_000606467.1;Parent=gene-AB25_RS01210;Dbxref=GenBank:WP_000606467.1;Name=WP_000606467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000606468.1;locus_tag=AB25_RS01210;product=hypothetical protein;protein_id=WP_000606467.1;transl_table=11 NZ_JJMC01000098.1 RefSeq gene 8538 8771 . + . ID=gene-AB25_RS01205;Name=AB25_RS01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01205;old_locus_tag=AB25_5136 NZ_JJMC01000098.1 Protein Homology CDS 8538 8771 . + 0 ID=cds-WP_000093745.1;Parent=gene-AB25_RS01205;Dbxref=GenBank:WP_000093745.1;Name=WP_000093745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000093744.1;locus_tag=AB25_RS01205;product=hypothetical protein;protein_id=WP_000093745.1;transl_table=11 NZ_JJMC01000098.1 RefSeq gene 8847 9149 . + . ID=gene-AB25_RS01200;Name=AB25_RS01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01200;old_locus_tag=AB25_5137 NZ_JJMC01000098.1 Protein Homology CDS 8847 9149 . + 0 ID=cds-WP_000379301.1;Parent=gene-AB25_RS01200;Dbxref=GenBank:WP_000379301.1;Name=WP_000379301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000379301.1;locus_tag=AB25_RS01200;product=hypothetical protein;protein_id=WP_000379301.1;transl_table=11 NZ_JJMC01000098.1 RefSeq gene 9421 9570 . + . ID=gene-AB25_RS01195;Name=AB25_RS01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01195;old_locus_tag=AB25_5138 NZ_JJMC01000098.1 GeneMarkS-2+ CDS 9421 9570 . + 0 ID=cds-WP_000903193.1;Parent=gene-AB25_RS01195;Dbxref=GenBank:WP_000903193.1;Name=WP_000903193.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB25_RS01195;product=hypothetical protein;protein_id=WP_000903193.1;transl_table=11 NZ_JJMC01000098.1 RefSeq pseudogene 9681 10502 . + . ID=gene-AB25_RS0126750;Name=AB25_RS0126750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS0126750;old_locus_tag=AB25_5140;pseudo=true NZ_JJMC01000098.1 Protein Homology CDS 9681 10502 . + 0 ID=cds-AB25_RS0126750;Parent=gene-AB25_RS0126750;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001234456.1;locus_tag=AB25_RS0126750;product=DUF932 domain-containing protein;pseudo=true;transl_table=11 NZ_JJMC01000098.1 RefSeq gene 10799 11389 . - . ID=gene-AB25_RS01190;Name=AB25_RS01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01190;old_locus_tag=AB25_5141 NZ_JJMC01000098.1 Protein Homology CDS 10799 11389 . - 0 ID=cds-WP_124827468.1;Parent=gene-AB25_RS01190;Dbxref=GenBank:WP_124827468.1;Name=WP_124827468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020246007.1;locus_tag=AB25_RS01190;product=transglycosylase SLT domain-containing protein;protein_id=WP_124827468.1;transl_table=11 NZ_JJMC01000098.1 RefSeq gene 11724 12107 . + . ID=gene-AB25_RS01185;Name=traM;gbkey=Gene;gene=traM;gene_biotype=protein_coding;locus_tag=AB25_RS01185;old_locus_tag=AB25_5142 NZ_JJMC01000098.1 Protein Homology CDS 11724 12107 . + 0 ID=cds-WP_001342639.1;Parent=gene-AB25_RS01185;Dbxref=GenBank:WP_001342639.1;Name=WP_001342639.1;Ontology_term=GO:0003677;gbkey=CDS;gene=traM;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151541.1;locus_tag=AB25_RS01185;product=conjugal transfer relaxosome DNA-binding protein TraM;protein_id=WP_001342639.1;transl_table=11 NZ_JJMC01000098.1 RefSeq gene 12300 12971 . + . ID=gene-AB25_RS01180;Name=traJ;gbkey=Gene;gene=traJ;gene_biotype=protein_coding;locus_tag=AB25_RS01180;old_locus_tag=AB25_5143 NZ_JJMC01000098.1 Protein Homology CDS 12300 12971 . + 0 ID=cds-WP_000283565.1;Parent=gene-AB25_RS01180;Dbxref=GenBank:WP_000283565.1;Name=WP_000283565.1;gbkey=CDS;gene=traJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001687056.1;locus_tag=AB25_RS01180;product=conjugal transfer transcriptional regulator TraJ;protein_id=WP_000283565.1;transl_table=11 NZ_JJMC01000098.1 RefSeq gene 13108 13335 . + . ID=gene-AB25_RS0126755;Name=traY;gbkey=Gene;gene=traY;gene_biotype=protein_coding;locus_tag=AB25_RS0126755 NZ_JJMC01000098.1 Protein Homology CDS 13108 13335 . + 0 ID=cds-WP_000089263.1;Parent=gene-AB25_RS0126755;Dbxref=GenBank:WP_000089263.1;Name=WP_000089263.1;gbkey=CDS;gene=traY;inference=COORDINATES: protein motif:HMM:NF010300.0;locus_tag=AB25_RS0126755;product=conjugal transfer relaxosome protein TraY;protein_id=WP_000089263.1;transl_table=11 NZ_JJMC01000098.1 RefSeq gene 13368 13727 . + . ID=gene-AB25_RS01175;Name=traA;gbkey=Gene;gene=traA;gene_biotype=protein_coding;locus_tag=AB25_RS01175;old_locus_tag=AB25_5144 NZ_JJMC01000098.1 Protein Homology CDS 13368 13727 . + 0 ID=cds-WP_001098997.1;Parent=gene-AB25_RS01175;Dbxref=GenBank:WP_001098997.1;Name=WP_001098997.1;gbkey=CDS;gene=traA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001098999.1;locus_tag=AB25_RS01175;product=type IV conjugative transfer system pilin TraA;protein_id=WP_001098997.1;transl_table=11 NZ_JJMC01000098.1 RefSeq gene 13742 14053 . + . ID=gene-AB25_RS01170;Name=traL;gbkey=Gene;gene=traL;gene_biotype=protein_coding;locus_tag=AB25_RS01170;old_locus_tag=AB25_5145 NZ_JJMC01000098.1 Protein Homology CDS 13742 14053 . + 0 ID=cds-WP_000012116.1;Parent=gene-AB25_RS01170;Dbxref=GenBank:WP_000012116.1;Name=WP_000012116.1;gbkey=CDS;gene=traL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490564.1;locus_tag=AB25_RS01170;product=type IV conjugative transfer system protein TraL;protein_id=WP_000012116.1;transl_table=11 NZ_JJMC01000098.1 RefSeq gene 14075 14641 . + . ID=gene-AB25_RS01165;Name=traE;gbkey=Gene;gene=traE;gene_biotype=protein_coding;locus_tag=AB25_RS01165;old_locus_tag=AB25_5146 NZ_JJMC01000098.1 Protein Homology CDS 14075 14641 . + 0 ID=cds-WP_032296176.1;Parent=gene-AB25_RS01165;Dbxref=GenBank:WP_032296176.1;Name=WP_032296176.1;gbkey=CDS;gene=traE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490565.1;locus_tag=AB25_RS01165;product=type IV conjugative transfer system protein TraE;protein_id=WP_032296176.1;transl_table=11 NZ_JJMC01000098.1 RefSeq gene 14628 15356 . + . ID=gene-AB25_RS01160;Name=traK;gbkey=Gene;gene=traK;gene_biotype=protein_coding;locus_tag=AB25_RS01160;old_locus_tag=AB25_5147 NZ_JJMC01000098.1 Protein Homology CDS 14628 15356 . + 0 ID=cds-WP_032179724.1;Parent=gene-AB25_RS01160;Dbxref=GenBank:WP_032179724.1;Name=WP_032179724.1;gbkey=CDS;gene=traK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490566.1;locus_tag=AB25_RS01160;product=type-F conjugative transfer system secretin TraK;protein_id=WP_032179724.1;transl_table=11 NZ_JJMC01000098.1 RefSeq gene 15356 16783 . + . ID=gene-AB25_RS01155;Name=traB;gbkey=Gene;gene=traB;gene_biotype=protein_coding;locus_tag=AB25_RS01155;old_locus_tag=AB25_5148 NZ_JJMC01000098.1 Protein Homology CDS 15356 16783 . + 0 ID=cds-WP_001462160.1;Parent=gene-AB25_RS01155;Dbxref=GenBank:WP_001462160.1;Name=WP_001462160.1;gbkey=CDS;gene=traB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001553749.1;locus_tag=AB25_RS01155;product=F-type conjugal transfer pilus assembly protein TraB;protein_id=WP_001462160.1;transl_table=11 NZ_JJMC01000098.1 RefSeq gene 16773 17357 . + . ID=gene-AB25_RS01150;Name=traP;gbkey=Gene;gene=traP;gene_biotype=protein_coding;locus_tag=AB25_RS01150;old_locus_tag=AB25_5149 NZ_JJMC01000098.1 Protein Homology CDS 16773 17357 . + 0 ID=cds-WP_000002795.1;Parent=gene-AB25_RS01150;Dbxref=GenBank:WP_000002795.1;Name=WP_000002795.1;gbkey=CDS;gene=traP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528624.1;locus_tag=AB25_RS01150;product=conjugal transfer pilus-stabilizing protein TraP;protein_id=WP_000002795.1;transl_table=11 NZ_JJMC01000098.1 RefSeq gene 17344 17664 . + . ID=gene-AB25_RS01145;Name=AB25_RS01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01145;old_locus_tag=AB25_5150 NZ_JJMC01000098.1 Protein Homology CDS 17344 17664 . + 0 ID=cds-WP_001057302.1;Parent=gene-AB25_RS01145;Dbxref=GenBank:WP_001057302.1;Name=WP_001057302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001377845.1;locus_tag=AB25_RS01145;product=conjugal transfer protein TrbD;protein_id=WP_001057302.1;transl_table=11 NZ_JJMC01000098.1 RefSeq gene 17657 17908 . + . ID=gene-AB25_RS01140;Name=trbG;gbkey=Gene;gene=trbG;gene_biotype=protein_coding;locus_tag=AB25_RS01140;old_locus_tag=AB25_5151 NZ_JJMC01000098.1 Protein Homology CDS 17657 17908 . + 0 ID=cds-WP_001038341.1;Parent=gene-AB25_RS01140;Dbxref=GenBank:WP_001038341.1;Name=WP_001038341.1;gbkey=CDS;gene=trbG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001038337.1;locus_tag=AB25_RS01140;product=conjugal transfer protein TrbG;protein_id=WP_001038341.1;transl_table=11 NZ_JJMC01000098.1 RefSeq gene 17905 18420 . + . ID=gene-AB25_RS01135;Name=traV;gbkey=Gene;gene=traV;gene_biotype=protein_coding;locus_tag=AB25_RS01135;old_locus_tag=AB25_5152 NZ_JJMC01000098.1 Protein Homology CDS 17905 18420 . + 0 ID=cds-WP_000809893.1;Parent=gene-AB25_RS01135;Dbxref=GenBank:WP_000809893.1;Name=WP_000809893.1;gbkey=CDS;gene=traV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233168.1;locus_tag=AB25_RS01135;product=type IV conjugative transfer system lipoprotein TraV;protein_id=WP_000809893.1;transl_table=11 NZ_JJMC01000098.1 RefSeq gene 18555 18776 . + . ID=gene-AB25_RS29590;Name=traR;gbkey=Gene;gene=traR;gene_biotype=protein_coding;locus_tag=AB25_RS29590;old_locus_tag=AB25_5153 NZ_JJMC01000098.1 Protein Homology CDS 18555 18776 . + 0 ID=cds-WP_003676426.1;Parent=gene-AB25_RS29590;Dbxref=GenBank:WP_003676426.1;Name=WP_003676426.1;gbkey=CDS;gene=traR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490571.1;locus_tag=AB25_RS29590;product=conjugal transfer protein TraR;protein_id=WP_003676426.1;transl_table=11 NZ_JJMC01000098.1 RefSeq gene 18769 19245 . + . ID=gene-AB25_RS01125;Name=AB25_RS01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01125;old_locus_tag=AB25_5154 NZ_JJMC01000098.1 Protein Homology CDS 18769 19245 . + 0 ID=cds-WP_000549587.1;Parent=gene-AB25_RS01125;Dbxref=GenBank:WP_000549587.1;Name=WP_000549587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000549587.1;locus_tag=AB25_RS01125;product=hypothetical protein;protein_id=WP_000549587.1;transl_table=11 NZ_JJMC01000098.1 RefSeq gene 19325 19543 . + . ID=gene-AB25_RS01120;Name=AB25_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01120;old_locus_tag=AB25_5155 NZ_JJMC01000098.1 Protein Homology CDS 19325 19543 . + 0 ID=cds-WP_000556745.1;Parent=gene-AB25_RS01120;Dbxref=GenBank:WP_000556745.1;Name=WP_000556745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000556745.1;locus_tag=AB25_RS01120;product=hypothetical protein;protein_id=WP_000556745.1;transl_table=11 NZ_JJMC01000098.1 RefSeq gene 19571 19918 . + . ID=gene-AB25_RS31860;Name=AB25_RS31860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31860;old_locus_tag=AB25_5156 NZ_JJMC01000098.1 Protein Homology CDS 19571 19918 . + 0 ID=cds-WP_000836682.1;Parent=gene-AB25_RS31860;Dbxref=GenBank:WP_000836682.1;Name=WP_000836682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000836682.1;locus_tag=AB25_RS31860;product=hypothetical protein;protein_id=WP_000836682.1;transl_table=11 NZ_JJMC01000098.1 RefSeq gene 20044 20962 . + . ID=gene-AB25_RS01110;Name=AB25_RS01110;end_range=20962,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01110;old_locus_tag=AB25_5157;partial=true NZ_JJMC01000098.1 Protein Homology CDS 20044 20962 . + 0 ID=cds-WP_032296179.1;Parent=gene-AB25_RS01110;Dbxref=GenBank:WP_032296179.1;Name=WP_032296179.1;end_range=20962,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000069745.1;locus_tag=AB25_RS01110;partial=true;product=TraC family protein;protein_id=WP_032296179.1;transl_table=11 ##sequence-region NZ_JJMC01000099.1 1 1108 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000099.1 RefSeq region 1 1108 . + . ID=NZ_JJMC01000099.1:1..1108;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000099.1 RefSeq gene 1 260 . + . ID=gene-AB25_RS32130;Name=AB25_RS32130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32130;partial=true;start_range=.,1 NZ_JJMC01000099.1 Protein Homology CDS 1 260 . + 2 ID=cds-WP_001334651.1-2;Parent=gene-AB25_RS32130;Dbxref=GenBank:WP_001334651.1;Name=WP_001334651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001566573.1;locus_tag=AB25_RS32130;partial=true;product=hypothetical protein;protein_id=WP_001334651.1;start_range=.,1;transl_table=11 NZ_JJMC01000099.1 RefSeq pseudogene 536 757 . + . ID=gene-AB25_RS32865;Name=AB25_RS32865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32865;partial=true;pseudo=true;start_range=.,536 NZ_JJMC01000099.1 Protein Homology CDS 536 757 . + 0 ID=cds-AB25_RS32865;Parent=gene-AB25_RS32865;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012565250.1;locus_tag=AB25_RS32865;partial=true;product=prepilin;pseudo=true;start_range=.,536;transl_table=11 NZ_JJMC01000099.1 RefSeq gene 754 1108 . - . ID=gene-AB25_RS29605;Name=AB25_RS29605;end_range=1108,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS29605;old_locus_tag=AB25_5159;partial=true NZ_JJMC01000099.1 Protein Homology CDS 754 1108 . - 1 ID=cds-WP_014654004.1;Parent=gene-AB25_RS29605;Dbxref=GenBank:WP_014654004.1;Name=WP_014654004.1;end_range=1108,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392640.1;locus_tag=AB25_RS29605;partial=true;product=hypothetical protein;protein_id=WP_014654004.1;transl_table=11 ##sequence-region NZ_JJMC01000100.1 1 22181 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000100.1 RefSeq region 1 22181 . + . ID=NZ_JJMC01000100.1:1..22181;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000100.1 RefSeq gene 1 344 . - . ID=gene-AB25_RS01100;Name=AB25_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01100;old_locus_tag=AB25_5160;partial=true;start_range=.,1 NZ_JJMC01000100.1 Protein Homology CDS 1 344 . - 0 ID=cds-WP_032296184.1;Parent=gene-AB25_RS01100;Dbxref=GenBank:WP_032296184.1;Name=WP_032296184.1;Ontology_term=GO:0005525;gbkey=CDS;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309422.1;locus_tag=AB25_RS01100;partial=true;product=GTPase;protein_id=WP_032296184.1;start_range=.,1;transl_table=11 NZ_JJMC01000100.1 RefSeq gene 608 2164 . + . ID=gene-AB25_RS01095;Name=AB25_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01095;old_locus_tag=AB25_5161 NZ_JJMC01000100.1 Protein Homology CDS 608 2164 . + 0 ID=cds-WP_032296182.1;Parent=gene-AB25_RS01095;Dbxref=GenBank:WP_032296182.1;Name=WP_032296182.1;Ontology_term=GO:0009307,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220915.1;locus_tag=AB25_RS01095;product=type I restriction-modification system subunit M;protein_id=WP_032296182.1;transl_table=11 NZ_JJMC01000100.1 RefSeq gene 2161 3375 . + . ID=gene-AB25_RS01090;Name=AB25_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01090;old_locus_tag=AB25_5162 NZ_JJMC01000100.1 Protein Homology CDS 2161 3375 . + 0 ID=cds-WP_032171728.1;Parent=gene-AB25_RS01090;Dbxref=GenBank:WP_032171728.1;Name=WP_032171728.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519412.1;locus_tag=AB25_RS01090;product=restriction endonuclease subunit S;protein_id=WP_032171728.1;transl_table=11 NZ_JJMC01000100.1 RefSeq gene 3497 6613 . + . ID=gene-AB25_RS01085;Name=AB25_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01085;old_locus_tag=AB25_5163 NZ_JJMC01000100.1 Protein Homology CDS 3497 6613 . + 0 ID=cds-WP_023149701.1;Parent=gene-AB25_RS01085;Dbxref=GenBank:WP_023149701.1;Name=WP_023149701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001764166.1;locus_tag=AB25_RS01085;product=HsdR family type I site-specific deoxyribonuclease;protein_id=WP_023149701.1;transl_table=11 NZ_JJMC01000100.1 RefSeq gene 6695 6922 . - . ID=gene-AB25_RS31865;Name=AB25_RS31865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31865;old_locus_tag=AB25_5164 NZ_JJMC01000100.1 GeneMarkS-2+ CDS 6695 6922 . - 0 ID=cds-WP_023149700.1;Parent=gene-AB25_RS31865;Dbxref=GenBank:WP_023149700.1;Name=WP_023149700.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB25_RS31865;product=hypothetical protein;protein_id=WP_023149700.1;transl_table=11 NZ_JJMC01000100.1 RefSeq pseudogene 7460 7573 . + . ID=gene-AB25_RS29610;Name=tnpB;end_range=7573,.;gbkey=Gene;gene=tnpB;gene_biotype=pseudogene;locus_tag=AB25_RS29610;old_locus_tag=AB25_5165;partial=true;pseudo=true NZ_JJMC01000100.1 Protein Homology CDS 7460 7573 . + 0 ID=cds-AB25_RS29610;Parent=gene-AB25_RS29610;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=7573,.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858246.1;locus_tag=AB25_RS29610;partial=true;product=IS66 family insertion sequence element accessory protein TnpB;pseudo=true;transl_table=11 NZ_JJMC01000100.1 RefSeq pseudogene 7603 7728 . - . ID=gene-AB25_RS29615;Name=AB25_RS29615;end_range=7728,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS29615;old_locus_tag=AB25_5166;partial=true;pseudo=true NZ_JJMC01000100.1 Protein Homology CDS 7603 7728 . - 0 ID=cds-AB25_RS29615;Parent=gene-AB25_RS29615;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=7728,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080164.1;locus_tag=AB25_RS29615;partial=true;product=transposase domain-containing protein;pseudo=true;transl_table=11 NZ_JJMC01000100.1 RefSeq gene 7742 8035 . + . ID=gene-AB25_RS01075;Name=AB25_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01075;old_locus_tag=AB25_5167 NZ_JJMC01000100.1 GeneMarkS-2+ CDS 7742 8035 . + 0 ID=cds-WP_023149966.1;Parent=gene-AB25_RS01075;Dbxref=GenBank:WP_023149966.1;Name=WP_023149966.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB25_RS01075;product=hypothetical protein;protein_id=WP_023149966.1;transl_table=11 NZ_JJMC01000100.1 RefSeq pseudogene 8482 9677 . + . ID=gene-AB25_RS30785;Name=AB25_RS30785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS30785;old_locus_tag=AB25_5169;pseudo=true NZ_JJMC01000100.1 Protein Homology CDS 8482 9677 . + 0 ID=cds-AB25_RS30785;Parent=gene-AB25_RS30785;Note=frameshifted;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001297906.1;locus_tag=AB25_RS30785;product=IS110-like element ISEc20 family transposase;pseudo=true;transl_table=11 NZ_JJMC01000100.1 RefSeq gene 9792 10289 . + . ID=gene-AB25_RS01070;Name=AB25_RS01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01070;old_locus_tag=AB25_5170 NZ_JJMC01000100.1 Protein Homology CDS 9792 10289 . + 0 ID=cds-WP_077695120.1;Parent=gene-AB25_RS01070;Dbxref=GenBank:WP_077695120.1;Name=WP_077695120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652429.1;locus_tag=AB25_RS01070;product=putative zinc ribbon protein;protein_id=WP_077695120.1;transl_table=11 NZ_JJMC01000100.1 RefSeq gene 10555 11958 . - . ID=gene-AB25_RS01065;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=AB25_RS01065;old_locus_tag=AB25_5171 NZ_JJMC01000100.1 Protein Homology CDS 10555 11958 . - 0 ID=cds-WP_023149961.1;Parent=gene-AB25_RS01065;Dbxref=GenBank:WP_023149961.1;Name=WP_023149961.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012905714.1;locus_tag=AB25_RS01065;product=class II fumarate hydratase;protein_id=WP_023149961.1;transl_table=11 NZ_JJMC01000100.1 RefSeq gene 12266 13633 . - . ID=gene-AB25_RS01060;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=AB25_RS01060;old_locus_tag=AB25_5172 NZ_JJMC01000100.1 Protein Homology CDS 12266 13633 . - 0 ID=cds-WP_023149960.1;Parent=gene-AB25_RS01060;Dbxref=GenBank:WP_023149960.1;Name=WP_023149960.1;Ontology_term=GO:0015740,GO:0015556,GO:0016020;gbkey=CDS;gene=dcuC;go_component=membrane|0016020||IEA;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013366024.1;locus_tag=AB25_RS01060;product=C4-dicarboxylate transporter DcuC;protein_id=WP_023149960.1;transl_table=11 NZ_JJMC01000100.1 RefSeq gene 13705 14877 . - . ID=gene-AB25_RS0126780;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=AB25_RS0126780;old_locus_tag=AB25_5173 NZ_JJMC01000100.1 Protein Homology CDS 13705 14877 . - 0 ID=cds-WP_024166501.1;Parent=gene-AB25_RS0126780;Dbxref=GenBank:WP_024166501.1;Name=WP_024166501.1;Ontology_term=GO:0009086,GO:0047804;gbkey=CDS;gene=metC;go_function=cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013366025.1;locus_tag=AB25_RS0126780;product=cystathionine beta-lyase;protein_id=WP_024166501.1;transl_table=11 NZ_JJMC01000100.1 RefSeq gene 15365 16729 . + . ID=gene-AB25_RS01055;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=AB25_RS01055;old_locus_tag=AB25_5174 NZ_JJMC01000100.1 Protein Homology CDS 15365 16729 . + 0 ID=cds-WP_023149958.1;Parent=gene-AB25_RS01055;Dbxref=GenBank:WP_023149958.1;Name=WP_023149958.1;Ontology_term=GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013366026.1;locus_tag=AB25_RS01055;product=adenylosuccinate lyase;protein_id=WP_023149958.1;transl_table=11 NZ_JJMC01000100.1 RefSeq gene 16867 18255 . + . ID=gene-AB25_RS01050;Name=AB25_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01050;old_locus_tag=AB25_5175 NZ_JJMC01000100.1 Protein Homology CDS 16867 18255 . + 0 ID=cds-WP_032171726.1;Parent=gene-AB25_RS01050;Dbxref=GenBank:WP_032171726.1;Name=WP_032171726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015871446.1;locus_tag=AB25_RS01050;product=MmgE/PrpD family protein;protein_id=WP_032171726.1;transl_table=11 NZ_JJMC01000100.1 RefSeq gene 18327 19202 . - . ID=gene-AB25_RS01045;Name=AB25_RS01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01045;old_locus_tag=AB25_5176 NZ_JJMC01000100.1 Protein Homology CDS 18327 19202 . - 0 ID=cds-WP_032296183.1;Parent=gene-AB25_RS01045;Dbxref=GenBank:WP_032296183.1;Name=WP_032296183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367684.1;locus_tag=AB25_RS01045;product=LysR family transcriptional regulator;protein_id=WP_032296183.1;transl_table=11 NZ_JJMC01000100.1 RefSeq pseudogene 19454 19934 . - . ID=gene-AB25_RS01040;Name=AB25_RS01040;end_range=19934,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS01040;old_locus_tag=AB25_5177;partial=true;pseudo=true NZ_JJMC01000100.1 Protein Homology CDS 19454 19934 . - 0 ID=cds-AB25_RS01040;Parent=gene-AB25_RS01040;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=19934,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AB25_RS01040;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_JJMC01000100.1 RefSeq gene 20018 21526 . - . ID=gene-AB25_RS01035;Name=ltrA;gbkey=Gene;gene=ltrA;gene_biotype=protein_coding;locus_tag=AB25_RS01035;old_locus_tag=AB25_5178 NZ_JJMC01000100.1 Protein Homology CDS 20018 21526 . - 0 ID=cds-WP_001189123.1-4;Parent=gene-AB25_RS01035;Dbxref=GenBank:WP_001189123.1;Name=WP_001189123.1;Ontology_term=GO:0000373,GO:0003964;gbkey=CDS;gene=ltrA;go_function=RNA-directed DNA polymerase activity|0003964||IEA;go_process=Group II intron splicing|0000373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708749.1;locus_tag=AB25_RS01035;product=group II intron reverse transcriptase/maturase;protein_id=WP_001189123.1;transl_table=11 NZ_JJMC01000100.1 RefSeq gene 21955 22181 . + . ID=gene-AB25_RS32140;Name=AB25_RS32140;end_range=22181,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32140;partial=true NZ_JJMC01000100.1 GeneMarkS-2+ CDS 21955 22181 . + 0 ID=cds-WP_279294772.1-3;Parent=gene-AB25_RS32140;Dbxref=GenBank:WP_279294772.1;Name=WP_279294772.1;end_range=22181,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB25_RS32140;partial=true;product=hypothetical protein;protein_id=WP_279294772.1;transl_table=11 ##sequence-region NZ_JJMC01000101.1 1 39214 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000101.1 RefSeq region 1 39214 . + . ID=NZ_JJMC01000101.1:1..39214;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000101.1 RefSeq pseudogene 131 304 . - . ID=gene-AB25_RS32575;Name=AB25_RS32575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32575;partial=true;pseudo=true;start_range=.,131 NZ_JJMC01000101.1 Protein Homology CDS 131 304 . - 0 ID=cds-AB25_RS32575;Parent=gene-AB25_RS32575;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052655.1;locus_tag=AB25_RS32575;partial=true;product=hypothetical protein;pseudo=true;start_range=.,131;transl_table=11 NZ_JJMC01000101.1 RefSeq pseudogene 375 580 . + . ID=gene-AB25_RS33035;Name=AB25_RS33035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS33035;pseudo=true NZ_JJMC01000101.1 Protein Homology CDS 375 580 . + 0 ID=cds-AB25_RS33035;Parent=gene-AB25_RS33035;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000547968.1;locus_tag=AB25_RS33035;product=single-stranded DNA-binding protein;pseudo=true;transl_table=11 NZ_JJMC01000101.1 RefSeq gene 604 777 . + . ID=gene-AB25_RS32145;Name=AB25_RS32145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32145;old_locus_tag=AB25_5179 NZ_JJMC01000101.1 GeneMarkS-2+ CDS 604 777 . + 0 ID=cds-WP_204361767.1;Parent=gene-AB25_RS32145;Dbxref=GenBank:WP_204361767.1;Name=WP_204361767.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB25_RS32145;product=hypothetical protein;protein_id=WP_204361767.1;transl_table=11 NZ_JJMC01000101.1 RefSeq gene 770 3397 . + . ID=gene-AB25_RS01030;Name=traC;gbkey=Gene;gene=traC;gene_biotype=protein_coding;locus_tag=AB25_RS01030;old_locus_tag=AB25_5180 NZ_JJMC01000101.1 Protein Homology CDS 770 3397 . + 0 ID=cds-WP_032171834.1;Parent=gene-AB25_RS01030;Dbxref=GenBank:WP_032171834.1;Name=WP_032171834.1;gbkey=CDS;gene=traC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001064255.1;locus_tag=AB25_RS01030;product=type IV secretion system protein TraC;protein_id=WP_032171834.1;transl_table=11 NZ_JJMC01000101.1 RefSeq gene 3394 3780 . + . ID=gene-AB25_RS01025;Name=trbI;gbkey=Gene;gene=trbI;gene_biotype=protein_coding;locus_tag=AB25_RS01025;old_locus_tag=AB25_5181 NZ_JJMC01000101.1 Protein Homology CDS 3394 3780 . + 0 ID=cds-WP_032296185.1;Parent=gene-AB25_RS01025;Dbxref=GenBank:WP_032296185.1;Name=WP_032296185.1;gbkey=CDS;gene=trbI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490574.1;locus_tag=AB25_RS01025;product=type-F conjugative transfer system protein TrbI;protein_id=WP_032296185.1;transl_table=11 NZ_JJMC01000101.1 RefSeq pseudogene 3777 4408 . + . ID=gene-AB25_RS0126795;Name=traW;gbkey=Gene;gene=traW;gene_biotype=pseudogene;locus_tag=AB25_RS0126795;old_locus_tag=AB25_5182;pseudo=true NZ_JJMC01000101.1 Protein Homology CDS 3777 4408 . + 0 ID=cds-AB25_RS0126795;Parent=gene-AB25_RS0126795;Note=frameshifted;gbkey=CDS;gene=traW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490575.1;locus_tag=AB25_RS0126795;product=type-F conjugative transfer system protein TraW;pseudo=true;transl_table=11 NZ_JJMC01000101.1 RefSeq gene 4405 5397 . + . ID=gene-AB25_RS01020;Name=traU;gbkey=Gene;gene=traU;gene_biotype=protein_coding;locus_tag=AB25_RS01020;old_locus_tag=AB25_5183 NZ_JJMC01000101.1 Protein Homology CDS 4405 5397 . + 0 ID=cds-WP_000830838.1;Parent=gene-AB25_RS01020;Dbxref=GenBank:WP_000830838.1;Name=WP_000830838.1;gbkey=CDS;gene=traU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490576.1;locus_tag=AB25_RS01020;product=conjugal transfer pilus assembly protein TraU;protein_id=WP_000830838.1;transl_table=11 NZ_JJMC01000101.1 RefSeq gene 5427 5732 . + . ID=gene-AB25_RS01015;Name=AB25_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01015;old_locus_tag=AB25_5184 NZ_JJMC01000101.1 Protein Homology CDS 5427 5732 . + 0 ID=cds-WP_032177946.1;Parent=gene-AB25_RS01015;Dbxref=GenBank:WP_032177946.1;Name=WP_032177946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001505125.1;locus_tag=AB25_RS01015;product=hypothetical protein;protein_id=WP_032177946.1;transl_table=11 NZ_JJMC01000101.1 RefSeq gene 5741 6379 . + . ID=gene-AB25_RS01010;Name=trbC;gbkey=Gene;gene=trbC;gene_biotype=protein_coding;locus_tag=AB25_RS01010;old_locus_tag=AB25_5185 NZ_JJMC01000101.1 Protein Homology CDS 5741 6379 . + 0 ID=cds-WP_001080257.1;Parent=gene-AB25_RS01010;Dbxref=GenBank:WP_001080257.1;Name=WP_001080257.1;gbkey=CDS;gene=trbC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001733892.1;locus_tag=AB25_RS01010;product=type-F conjugative transfer system pilin assembly protein TrbC;protein_id=WP_001080257.1;transl_table=11 NZ_JJMC01000101.1 RefSeq gene 6376 8226 . + . ID=gene-AB25_RS01005;Name=traN;gbkey=Gene;gene=traN;gene_biotype=protein_coding;locus_tag=AB25_RS01005;old_locus_tag=AB25_5186 NZ_JJMC01000101.1 Protein Homology CDS 6376 8226 . + 0 ID=cds-WP_032173658.1;Parent=gene-AB25_RS01005;Dbxref=GenBank:WP_032173658.1;Name=WP_032173658.1;gbkey=CDS;gene=traN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490579.1;locus_tag=AB25_RS01005;product=type-F conjugative transfer system mating-pair stabilization protein TraN;protein_id=WP_032173658.1;transl_table=11 NZ_JJMC01000101.1 RefSeq gene 8253 8510 . + . ID=gene-AB25_RS01000;Name=AB25_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS01000;old_locus_tag=AB25_5187 NZ_JJMC01000101.1 Protein Homology CDS 8253 8510 . + 0 ID=cds-WP_032173657.1;Parent=gene-AB25_RS01000;Dbxref=GenBank:WP_032173657.1;Name=WP_032173657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000864342.1;locus_tag=AB25_RS01000;product=conjugal transfer protein TrbE;protein_id=WP_032173657.1;transl_table=11 NZ_JJMC01000101.1 RefSeq gene 8503 9246 . + . ID=gene-AB25_RS00995;Name=traF;gbkey=Gene;gene=traF;gene_biotype=protein_coding;locus_tag=AB25_RS00995;old_locus_tag=AB25_5188 NZ_JJMC01000101.1 Protein Homology CDS 8503 9246 . + 0 ID=cds-WP_032173656.1;Parent=gene-AB25_RS00995;Dbxref=GenBank:WP_032173656.1;Name=WP_032173656.1;gbkey=CDS;gene=traF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001030376.1;locus_tag=AB25_RS00995;product=type-F conjugative transfer system pilin assembly protein TraF;protein_id=WP_032173656.1;transl_table=11 NZ_JJMC01000101.1 RefSeq gene 9262 9600 . + . ID=gene-AB25_RS0126800;Name=trbA;gbkey=Gene;gene=trbA;gene_biotype=protein_coding;locus_tag=AB25_RS0126800 NZ_JJMC01000101.1 Protein Homology CDS 9262 9600 . + 0 ID=cds-WP_001287905.1;Parent=gene-AB25_RS0126800;Dbxref=GenBank:WP_001287905.1;Name=WP_001287905.1;gbkey=CDS;gene=trbA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001553756.1;locus_tag=AB25_RS0126800;product=conjugal transfer protein TrbA;protein_id=WP_001287905.1;transl_table=11 NZ_JJMC01000101.1 RefSeq gene 9727 10011 . + . ID=gene-AB25_RS00990;Name=traQ;gbkey=Gene;gene=traQ;gene_biotype=protein_coding;locus_tag=AB25_RS00990;old_locus_tag=AB25_5189 NZ_JJMC01000101.1 Protein Homology CDS 9727 10011 . + 0 ID=cds-WP_032173655.1;Parent=gene-AB25_RS00990;Dbxref=GenBank:WP_032173655.1;Name=WP_032173655.1;gbkey=CDS;gene=traQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001617873.1;locus_tag=AB25_RS00990;product=type-F conjugative transfer system pilin chaperone TraQ;protein_id=WP_032173655.1;transl_table=11 NZ_JJMC01000101.1 RefSeq gene 9998 10543 . + . ID=gene-AB25_RS00985;Name=trbB;gbkey=Gene;gene=trbB;gene_biotype=protein_coding;locus_tag=AB25_RS00985;old_locus_tag=AB25_5190 NZ_JJMC01000101.1 Protein Homology CDS 9998 10543 . + 0 ID=cds-WP_000059832.1;Parent=gene-AB25_RS00985;Dbxref=GenBank:WP_000059832.1;Name=WP_000059832.1;gbkey=CDS;gene=trbB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000052622.1;locus_tag=AB25_RS00985;product=type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB;protein_id=WP_000059832.1;transl_table=11 NZ_JJMC01000101.1 RefSeq gene 10473 10814 . + . ID=gene-AB25_RS00980;Name=trbJ;gbkey=Gene;gene=trbJ;gene_biotype=protein_coding;locus_tag=AB25_RS00980;old_locus_tag=AB25_5191 NZ_JJMC01000101.1 Protein Homology CDS 10473 10814 . + 0 ID=cds-WP_001448115.1;Parent=gene-AB25_RS00980;Dbxref=GenBank:WP_001448115.1;Name=WP_001448115.1;gbkey=CDS;gene=trbJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001444236.1;locus_tag=AB25_RS00980;product=P-type conjugative transfer protein TrbJ;protein_id=WP_001448115.1;transl_table=11 NZ_JJMC01000101.1 RefSeq gene 10795 11187 . + . ID=gene-AB25_RS00975;Name=trbF;gbkey=Gene;gene=trbF;gene_biotype=protein_coding;locus_tag=AB25_RS00975;old_locus_tag=AB25_5192 NZ_JJMC01000101.1 Protein Homology CDS 10795 11187 . + 0 ID=cds-WP_000660703.1;Parent=gene-AB25_RS00975;Dbxref=GenBank:WP_000660703.1;Name=WP_000660703.1;gbkey=CDS;gene=trbF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016230912.1;locus_tag=AB25_RS00975;product=F-type conjugal transfer protein TrbF;protein_id=WP_000660703.1;transl_table=11 NZ_JJMC01000101.1 RefSeq gene 11174 12547 . + . ID=gene-AB25_RS00970;Name=traH;gbkey=Gene;gene=traH;gene_biotype=protein_coding;locus_tag=AB25_RS00970;old_locus_tag=AB25_5193 NZ_JJMC01000101.1 Protein Homology CDS 11174 12547 . + 0 ID=cds-WP_001137364.1;Parent=gene-AB25_RS00970;Dbxref=GenBank:WP_001137364.1;Name=WP_001137364.1;gbkey=CDS;gene=traH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001137361.1;locus_tag=AB25_RS00970;product=conjugal transfer pilus assembly protein TraH;protein_id=WP_001137364.1;transl_table=11 NZ_JJMC01000101.1 RefSeq gene 12544 15369 . + . ID=gene-AB25_RS00965;Name=traG;gbkey=Gene;gene=traG;gene_biotype=protein_coding;locus_tag=AB25_RS00965;old_locus_tag=AB25_5194 NZ_JJMC01000101.1 Protein Homology CDS 12544 15369 . + 0 ID=cds-WP_032173654.1;Parent=gene-AB25_RS00965;Dbxref=GenBank:WP_032173654.1;Name=WP_032173654.1;gbkey=CDS;gene=traG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001007007.1;locus_tag=AB25_RS00965;product=conjugal transfer mating-pair stabilization protein TraG;protein_id=WP_032173654.1;transl_table=11 NZ_JJMC01000101.1 RefSeq gene 15366 15875 . + . ID=gene-AB25_RS0126805;Name=traS;gbkey=Gene;gene=traS;gene_biotype=protein_coding;locus_tag=AB25_RS0126805 NZ_JJMC01000101.1 Protein Homology CDS 15366 15875 . + 0 ID=cds-WP_024168260.1;Parent=gene-AB25_RS0126805;Dbxref=GenBank:WP_024168260.1;Name=WP_024168260.1;Note=TraS%2C as the term is used in F-like plasmids%2C is a plasmid entry exclusion protein. It interacts with the F-like plasmid mating stabilization protein TraG.;gbkey=CDS;gene=traS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898910.1;locus_tag=AB25_RS0126805;product=conjugal transfer entry exclusion protein TraS;protein_id=WP_024168260.1;transl_table=11 NZ_JJMC01000101.1 RefSeq gene 15889 16620 . + . ID=gene-AB25_RS00960;Name=traT;gbkey=Gene;gene=traT;gene_biotype=protein_coding;locus_tag=AB25_RS00960;old_locus_tag=AB25_5195 NZ_JJMC01000101.1 Protein Homology CDS 15889 16620 . + 0 ID=cds-WP_001734698.1;Parent=gene-AB25_RS00960;Dbxref=GenBank:WP_001734698.1;Name=WP_001734698.1;gbkey=CDS;gene=traT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490587.1;locus_tag=AB25_RS00960;product=conjugal transfer complement resistance protein TraT;protein_id=WP_001734698.1;transl_table=11 NZ_JJMC01000101.1 RefSeq gene 16873 19080 . + . ID=gene-AB25_RS00955;Name=traD;gbkey=Gene;gene=traD;gene_biotype=protein_coding;locus_tag=AB25_RS00955;old_locus_tag=AB25_5196 NZ_JJMC01000101.1 Protein Homology CDS 16873 19080 . + 0 ID=cds-WP_032173653.1;Parent=gene-AB25_RS00955;Dbxref=GenBank:WP_032173653.1;Name=WP_032173653.1;gbkey=CDS;gene=traD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001577029.1;locus_tag=AB25_RS00955;product=type IV conjugative transfer system coupling protein TraD;protein_id=WP_032173653.1;transl_table=11 NZ_JJMC01000101.1 RefSeq gene 19080 24350 . + . ID=gene-AB25_RS00950;Name=traI;gbkey=Gene;gene=traI;gene_biotype=protein_coding;locus_tag=AB25_RS00950;old_locus_tag=AB25_5197 NZ_JJMC01000101.1 Protein Homology CDS 19080 24350 . + 0 ID=cds-WP_032173652.1;Parent=gene-AB25_RS00950;Dbxref=GenBank:WP_032173652.1;Name=WP_032173652.1;Ontology_term=GO:0003678;gbkey=CDS;gene=traI;go_function=DNA helicase activity|0003678||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490592.1;locus_tag=AB25_RS00950;product=conjugative transfer relaxase/helicase TraI;protein_id=WP_032173652.1;transl_table=11 NZ_JJMC01000101.1 RefSeq gene 24370 25116 . + . ID=gene-AB25_RS00945;Name=traX;gbkey=Gene;gene=traX;gene_biotype=protein_coding;locus_tag=AB25_RS00945;old_locus_tag=AB25_5198 NZ_JJMC01000101.1 Protein Homology CDS 24370 25116 . + 0 ID=cds-WP_032173651.1;Parent=gene-AB25_RS00945;Dbxref=GenBank:WP_032173651.1;Name=WP_032173651.1;gbkey=CDS;gene=traX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858383.2;locus_tag=AB25_RS00945;product=conjugal transfer pilus acetylase TraX;protein_id=WP_032173651.1;transl_table=11 NZ_JJMC01000101.1 RefSeq gene 25171 25731 . + . ID=gene-AB25_RS00940;Name=AB25_RS00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00940;old_locus_tag=AB25_5199 NZ_JJMC01000101.1 Protein Homology CDS 25171 25731 . + 0 ID=cds-WP_001696641.1;Parent=gene-AB25_RS00940;Dbxref=GenBank:WP_001696641.1;Name=WP_001696641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052671.1;locus_tag=AB25_RS00940;product=fertility inhibition protein FinO;protein_id=WP_001696641.1;transl_table=11 NZ_JJMC01000101.1 RefSeq gene 25850 26062 . + . ID=gene-AB25_RS00935;Name=AB25_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00935;old_locus_tag=AB25_5200 NZ_JJMC01000101.1 Protein Homology CDS 25850 26062 . + 0 ID=cds-WP_001301409.1;Parent=gene-AB25_RS00935;Dbxref=GenBank:WP_001301409.1;Name=WP_001301409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858385.1;locus_tag=AB25_RS00935;product=ANR family transcriptional regulator;protein_id=WP_001301409.1;transl_table=11 NZ_JJMC01000101.1 RefSeq gene 26349 27026 . + . ID=gene-AB25_RS00930;Name=AB25_RS00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00930;old_locus_tag=AB25_5201 NZ_JJMC01000101.1 Protein Homology CDS 26349 27026 . + 0 ID=cds-WP_000392235.1;Parent=gene-AB25_RS00930;Dbxref=GenBank:WP_000392235.1;Name=WP_000392235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001722975.1;locus_tag=AB25_RS00930;product=PIN domain-containing protein;protein_id=WP_000392235.1;transl_table=11 NZ_JJMC01000101.1 RefSeq gene 27692 27883 . + . ID=gene-AB25_RS00925;Name=AB25_RS00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00925;old_locus_tag=AB25_5203 NZ_JJMC01000101.1 Protein Homology CDS 27692 27883 . + 0 ID=cds-WP_071528006.1;Parent=gene-AB25_RS00925;Dbxref=GenBank:WP_071528006.1;Name=WP_071528006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858385.1;locus_tag=AB25_RS00925;product=hypothetical protein;protein_id=WP_071528006.1;transl_table=11 NZ_JJMC01000101.1 RefSeq gene 28127 28588 . + . ID=gene-AB25_RS00920;Name=AB25_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00920;old_locus_tag=AB25_5204 NZ_JJMC01000101.1 Protein Homology CDS 28127 28588 . + 0 ID=cds-WP_000978819.1;Parent=gene-AB25_RS00920;Dbxref=GenBank:WP_000978819.1;Name=WP_000978819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052672.1;locus_tag=AB25_RS00920;product=thermonuclease family protein;protein_id=WP_000978819.1;transl_table=11 NZ_JJMC01000101.1 RefSeq gene 28634 28843 . + . ID=gene-AB25_RS00915;Name=hha;gbkey=Gene;gene=hha;gene_biotype=protein_coding;locus_tag=AB25_RS00915;old_locus_tag=AB25_5205 NZ_JJMC01000101.1 Protein Homology CDS 28634 28843 . + 0 ID=cds-WP_001333231.1;Parent=gene-AB25_RS00915;Dbxref=GenBank:WP_001333231.1;Name=WP_001333231.1;gbkey=CDS;gene=hha;inference=COORDINATES: similar to AA sequence:RefSeq:NP_958726.1;locus_tag=AB25_RS00915;product=hemolysin expression modulator Hha;protein_id=WP_001333231.1;transl_table=11 NZ_JJMC01000101.1 RefSeq gene 28881 29471 . + . ID=gene-AB25_RS00910;Name=AB25_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00910;old_locus_tag=AB25_5206 NZ_JJMC01000101.1 Protein Homology CDS 28881 29471 . + 0 ID=cds-WP_000766807.1;Parent=gene-AB25_RS00910;Dbxref=GenBank:WP_000766807.1;Name=WP_000766807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858390.1;locus_tag=AB25_RS00910;product=DUF2726 domain-containing protein;protein_id=WP_000766807.1;transl_table=11 NZ_JJMC01000101.1 RefSeq gene 29711 29959 . + . ID=gene-AB25_RS00905;Name=AB25_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00905;old_locus_tag=AB25_5207 NZ_JJMC01000101.1 Protein Homology CDS 29711 29959 . + 0 ID=cds-WP_000083839.1;Parent=gene-AB25_RS00905;Dbxref=GenBank:WP_000083839.1;Name=WP_000083839.1;Ontology_term=GO:0006276;gbkey=CDS;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083832.1;locus_tag=AB25_RS00905;product=replication regulatory protein RepA;protein_id=WP_000083839.1;transl_table=11 NZ_JJMC01000101.1 RefSeq gene 30204 30278 . + . ID=gene-AB25_RS0126810;Name=tap;gbkey=Gene;gene=tap;gene_biotype=protein_coding;locus_tag=AB25_RS0126810 NZ_JJMC01000101.1 Protein Homology CDS 30204 30278 . + 0 ID=cds-WP_001365705.1;Parent=gene-AB25_RS0126810;Dbxref=GenBank:WP_001365705.1;Name=WP_001365705.1;Ontology_term=GO:0006276,GO:0031556;gbkey=CDS;gene=tap;go_process=plasmid maintenance|0006276||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001370046.1;locus_tag=AB25_RS0126810;product=RepA leader peptide Tap;protein_id=WP_001365705.1;transl_table=11 NZ_JJMC01000101.1 RefSeq gene 30271 31128 . + . ID=gene-AB25_RS00900;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=AB25_RS00900;old_locus_tag=AB25_5208 NZ_JJMC01000101.1 Protein Homology CDS 30271 31128 . + 0 ID=cds-WP_001696637.1;Parent=gene-AB25_RS00900;Dbxref=GenBank:WP_001696637.1;Name=WP_001696637.1;Ontology_term=GO:0006276;gbkey=CDS;gene=repA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052675.1;locus_tag=AB25_RS00900;product=incFII family plasmid replication initiator RepA;protein_id=WP_001696637.1;transl_table=11 NZ_JJMC01000101.1 RefSeq gene 32044 32313 . + . ID=gene-AB25_RS00895;Name=yacA;gbkey=Gene;gene=yacA;gene_biotype=protein_coding;locus_tag=AB25_RS00895;old_locus_tag=AB25_5209 NZ_JJMC01000101.1 Protein Homology CDS 32044 32313 . + 0 ID=cds-WP_000079939.1;Parent=gene-AB25_RS00895;Dbxref=GenBank:WP_000079939.1;Name=WP_000079939.1;gbkey=CDS;gene=yacA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015056448.1;locus_tag=AB25_RS00895;product=type II toxin-antitoxin system antitoxin YacA;protein_id=WP_000079939.1;transl_table=11 NZ_JJMC01000101.1 RefSeq pseudogene 32313 32423 . + . ID=gene-AB25_RS31500;Name=yacB;end_range=32423,.;gbkey=Gene;gene=yacB;gene_biotype=pseudogene;locus_tag=AB25_RS31500;old_locus_tag=AB25_5210;partial=true;pseudo=true NZ_JJMC01000101.1 Protein Homology CDS 32313 32423 . + 0 ID=cds-AB25_RS31500;Parent=gene-AB25_RS31500;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=32423,.;gbkey=CDS;gene=yacB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013009346.1;locus_tag=AB25_RS31500;partial=true;product=type II toxin-antitoxin system toxin YacB;pseudo=true;transl_table=11 NZ_JJMC01000101.1 RefSeq gene 32522 33445 . + . ID=gene-AB25_RS00890;Name=AB25_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00890;old_locus_tag=AB25_5211 NZ_JJMC01000101.1 Protein Homology CDS 32522 33445 . + 0 ID=cds-WP_001415483.1;Parent=gene-AB25_RS00890;Dbxref=GenBank:WP_001415483.1;Name=WP_001415483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001736690.1;locus_tag=AB25_RS00890;product=hypothetical protein;protein_id=WP_001415483.1;transl_table=11 NZ_JJMC01000101.1 RefSeq gene 33854 34267 . + . ID=gene-AB25_RS0126815;Name=AB25_RS0126815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0126815 NZ_JJMC01000101.1 Protein Homology CDS 33854 34267 . + 0 ID=cds-WP_252099956.1;Parent=gene-AB25_RS0126815;Dbxref=GenBank:WP_252099956.1;Name=WP_252099956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001722544.1;locus_tag=AB25_RS0126815;product=HTH domain-containing protein;protein_id=WP_252099956.1;transl_table=11 NZ_JJMC01000101.1 RefSeq pseudogene 34379 34783 . + . ID=gene-AB25_RS0126820;Name=AB25_RS0126820;end_range=34783,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS0126820;partial=true;pseudo=true NZ_JJMC01000101.1 Protein Homology CDS 34379 34783 . + 0 ID=cds-AB25_RS0126820;Parent=gene-AB25_RS0126820;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=34783,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_061586541.1;locus_tag=AB25_RS0126820;partial=true;product=IS91 family transposase;pseudo=true;transl_table=11 NZ_JJMC01000101.1 RefSeq gene 34890 35726 . - . ID=gene-AB25_RS0126825;Name=AB25_RS0126825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0126825;old_locus_tag=AB25_5213 NZ_JJMC01000101.1 Protein Homology CDS 34890 35726 . - 0 ID=cds-WP_000480972.1;Parent=gene-AB25_RS0126825;Dbxref=GenBank:WP_000480972.1;Name=WP_000480972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000480972.1;locus_tag=AB25_RS0126825;product=aminoglycoside O-phosphotransferase APH(6)-Id;protein_id=WP_000480972.1;transl_table=11 NZ_JJMC01000101.1 RefSeq gene 35726 36529 . - . ID=gene-AB25_RS00885;Name=aph(3'')-Ib;gbkey=Gene;gene=aph(3'')-Ib;gene_biotype=protein_coding;locus_tag=AB25_RS00885;old_locus_tag=AB25_5214 NZ_JJMC01000101.1 Protein Homology CDS 35726 36529 . - 0 ID=cds-WP_001082319.1;Parent=gene-AB25_RS00885;Dbxref=GenBank:WP_001082319.1;Name=WP_001082319.1;gbkey=CDS;gene=aph(3'')-Ib;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010890156.1;locus_tag=AB25_RS00885;product=aminoglycoside O-phosphotransferase APH(3'')-Ib;protein_id=WP_001082319.1;transl_table=11 NZ_JJMC01000101.1 RefSeq gene 36590 37405 . - . ID=gene-AB25_RS00880;Name=sul2;gbkey=Gene;gene=sul2;gene_biotype=protein_coding;locus_tag=AB25_RS00880;old_locus_tag=AB25_5215 NZ_JJMC01000101.1 Protein Homology CDS 36590 37405 . - 0 ID=cds-WP_001043260.1;Parent=gene-AB25_RS00880;Dbxref=GenBank:WP_001043260.1;Name=WP_001043260.1;gbkey=CDS;gene=sul2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001043260.1;locus_tag=AB25_RS00880;product=sulfonamide-resistant dihydropteroate synthase Sul2;protein_id=WP_001043260.1;transl_table=11 NZ_JJMC01000101.1 RefSeq gene 37742 37945 . + . ID=gene-AB25_RS0126830;Name=AB25_RS0126830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0126830 NZ_JJMC01000101.1 GeneMarkS-2+ CDS 37742 37945 . + 0 ID=cds-WP_000131876.1;Parent=gene-AB25_RS0126830;Dbxref=GenBank:WP_000131876.1;Name=WP_000131876.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB25_RS0126830;product=hypothetical protein;protein_id=WP_000131876.1;transl_table=11 NZ_JJMC01000101.1 RefSeq gene 37936 38157 . + . ID=gene-AB25_RS0126835;Name=AB25_RS0126835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0126835 NZ_JJMC01000101.1 GeneMarkS-2+ CDS 37936 38157 . + 0 ID=cds-WP_024170678.1;Parent=gene-AB25_RS0126835;Dbxref=GenBank:WP_024170678.1;Name=WP_024170678.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB25_RS0126835;product=hypothetical protein;protein_id=WP_024170678.1;transl_table=11 NZ_JJMC01000101.1 RefSeq gene 38392 38751 . - . ID=gene-AB25_RS00875;Name=AB25_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00875;old_locus_tag=AB25_5217 NZ_JJMC01000101.1 Protein Homology CDS 38392 38751 . - 0 ID=cds-WP_000050069.1;Parent=gene-AB25_RS00875;Dbxref=GenBank:WP_000050069.1;Name=WP_000050069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000050069.1;locus_tag=AB25_RS00875;product=hypothetical protein;protein_id=WP_000050069.1;transl_table=11 NZ_JJMC01000101.1 RefSeq gene 38908 39214 . - . ID=gene-AB25_RS0126840;Name=AB25_RS0126840;end_range=39214,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0126840;partial=true NZ_JJMC01000101.1 Protein Homology CDS 38908 39214 . - 1 ID=cds-WP_000319494.1;Parent=gene-AB25_RS0126840;Dbxref=GenBank:WP_000319494.1;Name=WP_000319494.1;end_range=39214,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032489893.1;locus_tag=AB25_RS0126840;partial=true;product=class A beta-lactamase;protein_id=WP_000319494.1;transl_table=11 ##sequence-region NZ_JJMC01000102.1 1 322 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000102.1 RefSeq region 1 322 . + . ID=NZ_JJMC01000102.1:1..322;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000102.1 RefSeq gene 1 201 . + . ID=gene-AB25_RS0126845;Name=AB25_RS0126845;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB25_RS0126845;partial=true;start_range=.,1 NZ_JJMC01000102.1 cmsearch rRNA 1 201 . + . ID=rna-AB25_RS0126845;Parent=gene-AB25_RS0126845;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS0126845;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JJMC01000102.1 cmsearch exon 1 201 . + . ID=exon-AB25_RS0126845-1;Parent=rna-AB25_RS0126845;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS0126845;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region NZ_JJMC01000103.1 1 11838 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000103.1 RefSeq region 1 11838 . + . ID=NZ_JJMC01000103.1:1..11838;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000103.1 RefSeq pseudogene 161 415 . + . ID=gene-AB25_RS0126855;Name=tnpB;end_range=415,.;gbkey=Gene;gene=tnpB;gene_biotype=pseudogene;locus_tag=AB25_RS0126855;old_locus_tag=AB25_5218;partial=true;pseudo=true NZ_JJMC01000103.1 Protein Homology CDS 161 415 . + 0 ID=cds-AB25_RS0126855;Parent=gene-AB25_RS0126855;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=415,.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536669.1;locus_tag=AB25_RS0126855;partial=true;product=IS66 family insertion sequence element accessory protein TnpB;pseudo=true;transl_table=11 NZ_JJMC01000103.1 RefSeq pseudogene 421 801 . + . ID=gene-AB25_RS30800;Name=AB25_RS30800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS30800;old_locus_tag=AB25_5219;partial=true;pseudo=true;start_range=.,421 NZ_JJMC01000103.1 Protein Homology CDS 421 801 . + 0 ID=cds-AB25_RS30800;Parent=gene-AB25_RS30800;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099160.1;locus_tag=AB25_RS30800;partial=true;product=IS66 family transposase;pseudo=true;start_range=.,421;transl_table=11 NZ_JJMC01000103.1 RefSeq gene 868 1056 . + . ID=gene-AB25_RS00865;Name=AB25_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00865;old_locus_tag=AB25_5220 NZ_JJMC01000103.1 Protein Homology CDS 868 1056 . + 0 ID=cds-WP_000035067.1;Parent=gene-AB25_RS00865;Dbxref=GenBank:WP_000035067.1;Name=WP_000035067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000035067.1;locus_tag=AB25_RS00865;product=hypothetical protein;protein_id=WP_000035067.1;transl_table=11 NZ_JJMC01000103.1 RefSeq gene 1074 3434 . - . ID=gene-AB25_RS00860;Name=AB25_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00860;old_locus_tag=AB25_5221 NZ_JJMC01000103.1 Protein Homology CDS 1074 3434 . - 0 ID=cds-WP_000233440.1;Parent=gene-AB25_RS00860;Dbxref=GenBank:WP_000233440.1;Name=WP_000233440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000233439.1;locus_tag=AB25_RS00860;product=TOTE conflict system archaeo-eukaryotic primase domain-containing protein;protein_id=WP_000233440.1;transl_table=11 NZ_JJMC01000103.1 RefSeq gene 3589 4152 . - . ID=gene-AB25_RS00855;Name=AB25_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00855;old_locus_tag=AB25_5222 NZ_JJMC01000103.1 Protein Homology CDS 3589 4152 . - 0 ID=cds-WP_032171863.1;Parent=gene-AB25_RS00855;Dbxref=GenBank:WP_032171863.1;Name=WP_032171863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309331.1;locus_tag=AB25_RS00855;product=inovirus-type Gp2 protein;protein_id=WP_032171863.1;transl_table=11 NZ_JJMC01000103.1 RefSeq gene 4973 6406 . - . ID=gene-AB25_RS00850;Name=AB25_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00850;old_locus_tag=AB25_5223 NZ_JJMC01000103.1 Protein Homology CDS 4973 6406 . - 0 ID=cds-WP_032296187.1;Parent=gene-AB25_RS00850;Dbxref=GenBank:WP_032296187.1;Name=WP_032296187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309330.1;locus_tag=AB25_RS00850;product=YfjI family protein;protein_id=WP_032296187.1;transl_table=11 NZ_JJMC01000103.1 RefSeq gene 6625 6822 . - . ID=gene-AB25_RS32870;Name=AB25_RS32870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32870 NZ_JJMC01000103.1 Protein Homology CDS 6625 6822 . - 0 ID=cds-WP_000579535.1;Parent=gene-AB25_RS32870;Dbxref=GenBank:WP_000579535.1;Name=WP_000579535.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024547.6;locus_tag=AB25_RS32870;product=DUF3987 domain-containing protein;protein_id=WP_000579535.1;transl_table=11 NZ_JJMC01000103.1 RefSeq gene 7049 7345 . - . ID=gene-AB25_RS0126865;Name=AB25_RS0126865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0126865 NZ_JJMC01000103.1 Protein Homology CDS 7049 7345 . - 0 ID=cds-WP_001303889.1;Parent=gene-AB25_RS0126865;Dbxref=GenBank:WP_001303889.1;Name=WP_001303889.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309329.1;locus_tag=AB25_RS0126865;product=helix-turn-helix transcriptional regulator;protein_id=WP_001303889.1;transl_table=11 NZ_JJMC01000103.1 RefSeq pseudogene 7568 8260 . - . ID=gene-AB25_RS30810;Name=AB25_RS30810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS30810;pseudo=true NZ_JJMC01000103.1 Protein Homology CDS 7568 8260 . - 0 ID=cds-AB25_RS30810;Parent=gene-AB25_RS30810;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477181.1;locus_tag=AB25_RS30810;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_JJMC01000103.1 RefSeq gene 8457 10274 . + . ID=gene-AB25_RS00840;Name=AB25_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00840;old_locus_tag=AB25_5226 NZ_JJMC01000103.1 Protein Homology CDS 8457 10274 . + 0 ID=cds-WP_000282209.1;Parent=gene-AB25_RS00840;Dbxref=GenBank:WP_000282209.1;Name=WP_000282209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309327.1;locus_tag=AB25_RS00840;product=hypothetical protein;protein_id=WP_000282209.1;transl_table=11 NZ_JJMC01000103.1 RefSeq gene 10460 11662 . - . ID=gene-AB25_RS00835;Name=AB25_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00835;old_locus_tag=AB25_5227 NZ_JJMC01000103.1 Protein Homology CDS 10460 11662 . - 0 ID=cds-WP_000279872.1;Parent=gene-AB25_RS00835;Dbxref=GenBank:WP_000279872.1;Name=WP_000279872.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309326.1;locus_tag=AB25_RS00835;product=tyrosine-type recombinase/integrase;protein_id=WP_000279872.1;transl_table=11 ##sequence-region NZ_JJMC01000104.1 1 3309 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000104.1 RefSeq region 1 3309 . + . ID=NZ_JJMC01000104.1:1..3309;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000104.1 RefSeq gene 1 260 . + . ID=gene-AB25_RS32150;Name=AB25_RS32150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32150;partial=true;start_range=.,1 NZ_JJMC01000104.1 Protein Homology CDS 1 260 . + 2 ID=cds-WP_001334651.1-3;Parent=gene-AB25_RS32150;Dbxref=GenBank:WP_001334651.1;Name=WP_001334651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001566573.1;locus_tag=AB25_RS32150;partial=true;product=hypothetical protein;protein_id=WP_001334651.1;start_range=.,1;transl_table=11 NZ_JJMC01000104.1 RefSeq gene 1056 1409 . - . ID=gene-AB25_RS32585;Name=AB25_RS32585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32585;old_locus_tag=AB25_5230 NZ_JJMC01000104.1 Protein Homology CDS 1056 1409 . - 0 ID=cds-WP_001393368.1;Parent=gene-AB25_RS32585;Dbxref=GenBank:WP_001393368.1;Name=WP_001393368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001393368.1;locus_tag=AB25_RS32585;product=hypothetical protein;protein_id=WP_001393368.1;transl_table=11 NZ_JJMC01000104.1 RefSeq gene 1408 2562 . + . ID=gene-AB25_RS00825;Name=AB25_RS00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00825;old_locus_tag=AB25_5231 NZ_JJMC01000104.1 Protein Homology CDS 1408 2562 . + 0 ID=cds-WP_001139958.1-2;Parent=gene-AB25_RS00825;Dbxref=GenBank:WP_001139958.1;Name=WP_001139958.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396170.1;locus_tag=AB25_RS00825;product=tyrosine-type recombinase/integrase;protein_id=WP_001139958.1;transl_table=11 NZ_JJMC01000104.1 RefSeq gene 2713 3309 . + . ID=gene-AB25_RS00820;Name=traE;end_range=3309,.;gbkey=Gene;gene=traE;gene_biotype=protein_coding;locus_tag=AB25_RS00820;old_locus_tag=AB25_5232;partial=true NZ_JJMC01000104.1 Protein Homology CDS 2713 3309 . + 0 ID=cds-WP_032171714.1-2;Parent=gene-AB25_RS00820;Dbxref=GenBank:WP_032171714.1;Name=WP_032171714.1;end_range=3309,.;gbkey=CDS;gene=traE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001238927.1;locus_tag=AB25_RS00820;partial=true;product=conjugal transfer protein TraE;protein_id=WP_032171714.1;transl_table=11 ##sequence-region NZ_JJMC01000105.1 1 8371 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000105.1 RefSeq region 1 8371 . + . ID=NZ_JJMC01000105.1:1..8371;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000105.1 RefSeq gene 1 307 . + . ID=gene-AB25_RS0126875;Name=AB25_RS0126875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0126875;partial=true;start_range=.,1 NZ_JJMC01000105.1 Protein Homology CDS 1 307 . + 1 ID=cds-WP_000319494.1-2;Parent=gene-AB25_RS0126875;Dbxref=GenBank:WP_000319494.1;Name=WP_000319494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032489893.1;locus_tag=AB25_RS0126875;partial=true;product=class A beta-lactamase;protein_id=WP_000319494.1;start_range=.,1;transl_table=11 NZ_JJMC01000105.1 RefSeq gene 910 1890 . + . ID=gene-AB25_RS00815;Name=AB25_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00815;old_locus_tag=AB25_5234 NZ_JJMC01000105.1 Protein Homology CDS 910 1890 . + 0 ID=cds-WP_001218107.1;Parent=gene-AB25_RS00815;Dbxref=GenBank:WP_001218107.1;Name=WP_001218107.1;Ontology_term=GO:0030541,GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;go_process=plasmid partitioning|0030541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396154.1;locus_tag=AB25_RS00815;product=plasmid segregation protein ParM;protein_id=WP_001218107.1;transl_table=11 NZ_JJMC01000105.1 RefSeq gene 1893 2315 . + . ID=gene-AB25_RS00810;Name=AB25_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00810;old_locus_tag=AB25_5235 NZ_JJMC01000105.1 Protein Homology CDS 1893 2315 . + 0 ID=cds-WP_000774834.1;Parent=gene-AB25_RS00810;Dbxref=GenBank:WP_000774834.1;Name=WP_000774834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001617754.1;locus_tag=AB25_RS00810;product=plasmid partitioning/stability family protein;protein_id=WP_000774834.1;transl_table=11 NZ_JJMC01000105.1 RefSeq gene 2339 2629 . + . ID=gene-AB25_RS32590;Name=AB25_RS32590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32590 NZ_JJMC01000105.1 Protein Homology CDS 2339 2629 . + 0 ID=cds-WP_032141698.1;Parent=gene-AB25_RS32590;Dbxref=GenBank:WP_032141698.1;Name=WP_032141698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858330.2;locus_tag=AB25_RS32590;product=hypothetical protein;protein_id=WP_032141698.1;transl_table=11 NZ_JJMC01000105.1 RefSeq gene 2739 3641 . + . ID=gene-AB25_RS00805;Name=AB25_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00805;old_locus_tag=AB25_5237 NZ_JJMC01000105.1 Protein Homology CDS 2739 3641 . + 0 ID=cds-WP_001386431.1;Parent=gene-AB25_RS00805;Dbxref=GenBank:WP_001386431.1;Name=WP_001386431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052643.1;locus_tag=AB25_RS00805;product=DUF1281 domain-containing protein;protein_id=WP_001386431.1;transl_table=11 NZ_JJMC01000105.1 RefSeq gene 3638 3949 . + . ID=gene-AB25_RS30825;Name=AB25_RS30825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS30825 NZ_JJMC01000105.1 Protein Homology CDS 3638 3949 . + 0 ID=cds-WP_032146222.1;Parent=gene-AB25_RS30825;Dbxref=GenBank:WP_032146222.1;Name=WP_032146222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858330.2;locus_tag=AB25_RS30825;product=hypothetical protein;protein_id=WP_032146222.1;transl_table=11 NZ_JJMC01000105.1 RefSeq gene 4027 4710 . + . ID=gene-AB25_RS00800;Name=AB25_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00800;old_locus_tag=AB25_5240 NZ_JJMC01000105.1 Protein Homology CDS 4027 4710 . + 0 ID=cds-WP_032296188.1;Parent=gene-AB25_RS00800;Dbxref=GenBank:WP_032296188.1;Name=WP_032296188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858331.2;locus_tag=AB25_RS00800;product=DNA methylase;protein_id=WP_032296188.1;transl_table=11 NZ_JJMC01000105.1 RefSeq gene 4711 4932 . + . ID=gene-AB25_RS00795;Name=AB25_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00795;old_locus_tag=AB25_5241 NZ_JJMC01000105.1 Protein Homology CDS 4711 4932 . + 0 ID=cds-WP_001104873.1;Parent=gene-AB25_RS00795;Dbxref=GenBank:WP_001104873.1;Name=WP_001104873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_958723.1;locus_tag=AB25_RS00795;product=hypothetical protein;protein_id=WP_001104873.1;transl_table=11 NZ_JJMC01000105.1 RefSeq gene 4862 5380 . + . ID=gene-AB25_RS00790;Name=AB25_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00790;old_locus_tag=AB25_5242 NZ_JJMC01000105.1 Protein Homology CDS 4862 5380 . + 0 ID=cds-WP_224162043.1;Parent=gene-AB25_RS00790;Dbxref=GenBank:WP_224162043.1;Name=WP_224162043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052646.1;locus_tag=AB25_RS00790;product=DUF1380 family protein;protein_id=WP_224162043.1;transl_table=11 NZ_JJMC01000105.1 RefSeq gene 5425 6195 . + . ID=gene-AB25_RS32155;Name=AB25_RS32155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32155;old_locus_tag=AB25_5243 NZ_JJMC01000105.1 Protein Homology CDS 5425 6195 . + 0 ID=cds-WP_032296189.1;Parent=gene-AB25_RS32155;Dbxref=GenBank:WP_032296189.1;Name=WP_032296189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858335.1;locus_tag=AB25_RS32155;product=hypothetical protein;protein_id=WP_032296189.1;transl_table=11 NZ_JJMC01000105.1 RefSeq gene 6609 7034 . + . ID=gene-AB25_RS00780;Name=AB25_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00780;old_locus_tag=AB25_5244 NZ_JJMC01000105.1 Protein Homology CDS 6609 7034 . + 0 ID=cds-WP_001198914.1;Parent=gene-AB25_RS00780;Dbxref=GenBank:WP_001198914.1;Name=WP_001198914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001198918.1;locus_tag=AB25_RS00780;product=antirestriction protein;protein_id=WP_001198914.1;transl_table=11 NZ_JJMC01000105.1 RefSeq gene 7081 7503 . + . ID=gene-AB25_RS00775;Name=AB25_RS00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00775;old_locus_tag=AB25_5245 NZ_JJMC01000105.1 Protein Homology CDS 7081 7503 . + 0 ID=cds-WP_001378618.1;Parent=gene-AB25_RS00775;Dbxref=GenBank:WP_001378618.1;Name=WP_001378618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052650.1;locus_tag=AB25_RS00775;product=DUF1380 family protein;protein_id=WP_001378618.1;transl_table=11 NZ_JJMC01000105.1 RefSeq gene 7500 7691 . + . ID=gene-AB25_RS00770;Name=AB25_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00770;old_locus_tag=AB25_5246 NZ_JJMC01000105.1 Protein Homology CDS 7500 7691 . + 0 ID=cds-WP_001027511.1;Parent=gene-AB25_RS00770;Dbxref=GenBank:WP_001027511.1;Name=WP_001027511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238862.1;locus_tag=AB25_RS00770;product=hypothetical protein;protein_id=WP_001027511.1;transl_table=11 NZ_JJMC01000105.1 RefSeq pseudogene 8058 8212 . - . ID=gene-AB25_RS33040;Name=AB25_RS33040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS33040;partial=true;pseudo=true;start_range=.,8058 NZ_JJMC01000105.1 Protein Homology CDS 8058 8212 . - 0 ID=cds-AB25_RS33040;Parent=gene-AB25_RS33040;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311849.1;locus_tag=AB25_RS33040;partial=true;product=hypothetical protein;pseudo=true;start_range=.,8058;transl_table=11 ##sequence-region NZ_JJMC01000106.1 1 1773 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000106.1 RefSeq region 1 1773 . + . ID=NZ_JJMC01000106.1:1..1773;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000106.1 RefSeq pseudogene 1 337 . + . ID=gene-AB25_RS0126890;Name=fimB;gbkey=Gene;gene=fimB;gene_biotype=pseudogene;locus_tag=AB25_RS0126890;partial=true;pseudo=true;start_range=.,1 NZ_JJMC01000106.1 Protein Homology CDS 1 337 . + 1 ID=cds-AB25_RS0126890;Parent=gene-AB25_RS0126890;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=fimB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313298.1;locus_tag=AB25_RS0126890;partial=true;product=type 1 fimbria switch DNA invertase FimB;pseudo=true;start_range=.,1;transl_table=11 NZ_JJMC01000106.1 RefSeq gene 815 1411 . + . ID=gene-AB25_RS00765;Name=fimE;gbkey=Gene;gene=fimE;gene_biotype=protein_coding;locus_tag=AB25_RS00765;old_locus_tag=AB25_5249 NZ_JJMC01000106.1 Protein Homology CDS 815 1411 . + 0 ID=cds-WP_000044711.1-2;Parent=gene-AB25_RS00765;Dbxref=GenBank:WP_000044711.1;Name=WP_000044711.1;Note=upgraded from regulatory protein to switch DNA invertase;gbkey=CDS;gene=fimE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418733.1;locus_tag=AB25_RS00765;product=type 1 fimbria switch DNA invertase FimE;protein_id=WP_000044711.1;transl_table=11 ##sequence-region NZ_JJMC01000107.1 1 6406 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000107.1 RefSeq region 1 6406 . + . ID=NZ_JJMC01000107.1:1..6406;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000107.1 RefSeq pseudogene 1 105 . - . ID=gene-AB25_RS00760;Name=AB25_RS00760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS00760;old_locus_tag=AB25_5250;partial=true;pseudo=true;start_range=.,1 NZ_JJMC01000107.1 Protein Homology CDS 1 105 . - 0 ID=cds-AB25_RS00760;Parent=gene-AB25_RS00760;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490564.1;locus_tag=AB25_RS00760;partial=true;product=type IV conjugative transfer system protein TraL;pseudo=true;start_range=.,1;transl_table=11 NZ_JJMC01000107.1 RefSeq gene 120 485 . - . ID=gene-AB25_RS00755;Name=traA;gbkey=Gene;gene=traA;gene_biotype=protein_coding;locus_tag=AB25_RS00755;old_locus_tag=AB25_5251 NZ_JJMC01000107.1 Protein Homology CDS 120 485 . - 0 ID=cds-WP_000994779.1;Parent=gene-AB25_RS00755;Dbxref=GenBank:WP_000994779.1;Name=WP_000994779.1;gbkey=CDS;gene=traA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001098999.1;locus_tag=AB25_RS00755;product=type IV conjugative transfer system pilin TraA;protein_id=WP_000994779.1;transl_table=11 NZ_JJMC01000107.1 RefSeq gene 518 913 . - . ID=gene-AB25_RS0126895;Name=traY;gbkey=Gene;gene=traY;gene_biotype=protein_coding;locus_tag=AB25_RS0126895 NZ_JJMC01000107.1 Protein Homology CDS 518 913 . - 0 ID=cds-WP_001309237.1;Parent=gene-AB25_RS0126895;Dbxref=GenBank:WP_001309237.1;Name=WP_001309237.1;Ontology_term=GO:0003677;gbkey=CDS;gene=traY;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001366159.1;locus_tag=AB25_RS0126895;product=conjugal transfer relaxosome DNA-bindin protein TraY;protein_id=WP_001309237.1;transl_table=11 NZ_JJMC01000107.1 RefSeq gene 1012 1701 . - . ID=gene-AB25_RS00750;Name=traJ;gbkey=Gene;gene=traJ;gene_biotype=protein_coding;locus_tag=AB25_RS00750;old_locus_tag=AB25_5253 NZ_JJMC01000107.1 Protein Homology CDS 1012 1701 . - 0 ID=cds-WP_000283385.1;Parent=gene-AB25_RS00750;Dbxref=GenBank:WP_000283385.1;Name=WP_000283385.1;gbkey=CDS;gene=traJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003979562.1;locus_tag=AB25_RS00750;product=conjugal transfer transcriptional regulator TraJ;protein_id=WP_000283385.1;transl_table=11 NZ_JJMC01000107.1 RefSeq pseudogene 1888 2272 . - . ID=gene-AB25_RS00745;Name=traM;gbkey=Gene;gene=traM;gene_biotype=pseudogene;locus_tag=AB25_RS00745;old_locus_tag=AB25_5254;pseudo=true NZ_JJMC01000107.1 Protein Homology CDS 1888 2272 . - 0 ID=cds-AB25_RS00745;Parent=gene-AB25_RS00745;Note=frameshifted;Ontology_term=GO:0003677;gbkey=CDS;gene=traM;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151541.1;locus_tag=AB25_RS00745;product=conjugal transfer relaxosome DNA-binding protein TraM;pseudo=true;transl_table=11 NZ_JJMC01000107.1 RefSeq gene 2593 3195 . + . ID=gene-AB25_RS00740;Name=AB25_RS00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00740;old_locus_tag=AB25_5255 NZ_JJMC01000107.1 Protein Homology CDS 2593 3195 . + 0 ID=cds-WP_013362798.1;Parent=gene-AB25_RS00740;Dbxref=GenBank:WP_013362798.1;Name=WP_013362798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000243715.1;locus_tag=AB25_RS00740;product=transglycosylase SLT domain-containing protein;protein_id=WP_013362798.1;transl_table=11 NZ_JJMC01000107.1 RefSeq gene 3492 4313 . - . ID=gene-AB25_RS00735;Name=AB25_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00735;old_locus_tag=AB25_5256 NZ_JJMC01000107.1 Protein Homology CDS 3492 4313 . - 0 ID=cds-WP_001234426.1;Parent=gene-AB25_RS00735;Dbxref=GenBank:WP_001234426.1;Name=WP_001234426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001234456.1;locus_tag=AB25_RS00735;product=DUF932 domain-containing protein;protein_id=WP_001234426.1;transl_table=11 NZ_JJMC01000107.1 RefSeq gene 4431 4718 . - . ID=gene-AB25_RS00730;Name=AB25_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00730;old_locus_tag=AB25_5257 NZ_JJMC01000107.1 Protein Homology CDS 4431 4718 . - 0 ID=cds-WP_000107535.1;Parent=gene-AB25_RS00730;Dbxref=GenBank:WP_000107535.1;Name=WP_000107535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001825190.1;locus_tag=AB25_RS00730;product=hypothetical protein;protein_id=WP_000107535.1;transl_table=11 NZ_JJMC01000107.1 RefSeq gene 4743 4949 . - . ID=gene-AB25_RS32595;Name=AB25_RS32595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32595 NZ_JJMC01000107.1 Protein Homology CDS 4743 4949 . - 0 ID=cds-WP_000275855.1;Parent=gene-AB25_RS32595;Dbxref=GenBank:WP_000275855.1;Name=WP_000275855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000547968.1;locus_tag=AB25_RS32595;product=hypothetical protein;protein_id=WP_000275855.1;transl_table=11 NZ_JJMC01000107.1 RefSeq pseudogene 5019 5191 . + . ID=gene-AB25_RS32600;Name=AB25_RS32600;end_range=5191,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32600;partial=true;pseudo=true NZ_JJMC01000107.1 Protein Homology CDS 5019 5191 . + 0 ID=cds-AB25_RS32600;Parent=gene-AB25_RS32600;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=5191,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052655.1;locus_tag=AB25_RS32600;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJMC01000107.1 RefSeq gene 5189 5419 . - . ID=gene-AB25_RS32605;Name=AB25_RS32605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32605;old_locus_tag=AB25_5258 NZ_JJMC01000107.1 Protein Homology CDS 5189 5419 . - 0 ID=cds-WP_071886920.1;Parent=gene-AB25_RS32605;Dbxref=GenBank:WP_071886920.1;Name=WP_071886920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001426396.1;locus_tag=AB25_RS32605;product=hypothetical protein;protein_id=WP_071886920.1;transl_table=11 NZ_JJMC01000107.1 RefSeq gene 5639 5764 . - . ID=gene-AB25_RS0126910;Name=AB25_RS0126910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0126910 NZ_JJMC01000107.1 Protein Homology CDS 5639 5764 . - 0 ID=cds-WP_001372321.1;Parent=gene-AB25_RS0126910;Dbxref=GenBank:WP_001372321.1;Name=WP_001372321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052660.1;locus_tag=AB25_RS0126910;product=type I toxin-antitoxin system Hok family toxin;protein_id=WP_001372321.1;transl_table=11 NZ_JJMC01000107.1 RefSeq pseudogene 5706 5855 . - . ID=gene-AB25_RS32610;Name=mok;gbkey=Gene;gene=mok;gene_biotype=pseudogene;locus_tag=AB25_RS32610;partial=true;pseudo=true;start_range=.,5706 NZ_JJMC01000107.1 Protein Homology CDS 5706 5855 . - 0 ID=cds-AB25_RS32610;Parent=gene-AB25_RS32610;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=mok;inference=COORDINATES: protein motif:HMM:NF010277.0;locus_tag=AB25_RS32610;partial=true;product=plasmid maintenance protein Mok;pseudo=true;start_range=.,5706;transl_table=11 NZ_JJMC01000107.1 RefSeq gene 5877 6065 . + . ID=gene-AB25_RS31880;Name=AB25_RS31880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31880;old_locus_tag=AB25_5259 NZ_JJMC01000107.1 GeneMarkS-2+ CDS 5877 6065 . + 0 ID=cds-WP_001299721.1;Parent=gene-AB25_RS31880;Dbxref=GenBank:WP_001299721.1;Name=WP_001299721.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB25_RS31880;product=hypothetical protein;protein_id=WP_001299721.1;transl_table=11 NZ_JJMC01000107.1 RefSeq pseudogene 6034 6406 . - . ID=gene-AB25_RS00720;Name=AB25_RS00720;end_range=6406,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS00720;old_locus_tag=AB25_5260;partial=true;pseudo=true NZ_JJMC01000107.1 Protein Homology CDS 6034 6406 . - 0 ID=cds-AB25_RS00720;Parent=gene-AB25_RS00720;Note=frameshifted%3B incomplete%3B missing N-terminus;end_range=6406,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052659.1;locus_tag=AB25_RS00720;partial=true;product=plasmid SOS inhibition protein A;pseudo=true;transl_table=11 ##sequence-region NZ_JJMC01000108.1 1 489 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000108.1 RefSeq region 1 489 . + . ID=NZ_JJMC01000108.1:1..489;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000108.1 RefSeq gene 1 489 . + . ID=gene-AB25_RS00715;Name=AB25_RS00715;end_range=489,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00715;old_locus_tag=AB25_5261;partial=true;start_range=.,1 NZ_JJMC01000108.1 Protein Homology CDS 1 489 . + 1 ID=cds-WP_032296196.1;Parent=gene-AB25_RS00715;Dbxref=GenBank:WP_032296196.1;Name=WP_032296196.1;Ontology_term=GO:0003924,GO:0005525;end_range=489,.;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309422.1;locus_tag=AB25_RS00715;partial=true;product=GTPase family protein;protein_id=WP_032296196.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JJMC01000109.1 1 1378 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000109.1 RefSeq region 1 1378 . + . ID=NZ_JJMC01000109.1:1..1378;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 ##sequence-region NZ_JJMC01000110.1 1 3597 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000110.1 RefSeq region 1 3597 . + . ID=NZ_JJMC01000110.1:1..3597;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000110.1 RefSeq gene 1 755 . - . ID=gene-AB25_RS00710;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=AB25_RS00710;old_locus_tag=AB25_5265;partial=true;start_range=.,1 NZ_JJMC01000110.1 Protein Homology CDS 1 755 . - 0 ID=cds-WP_032296198.1;Parent=gene-AB25_RS00710;Dbxref=GenBank:WP_032296198.1;Name=WP_032296198.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313167.2;locus_tag=AB25_RS00710;partial=true;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WP_032296198.1;start_range=.,1;transl_table=11 NZ_JJMC01000110.1 RefSeq gene 850 1395 . + . ID=gene-AB25_RS00705;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=AB25_RS00705;old_locus_tag=AB25_5266 NZ_JJMC01000110.1 Protein Homology CDS 850 1395 . + 0 ID=cds-WP_001295188.1-2;Parent=gene-AB25_RS00705;Dbxref=GenBank:WP_001295188.1;Name=WP_001295188.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882950.1;locus_tag=AB25_RS00705;product=oligoribonuclease;protein_id=WP_001295188.1;transl_table=11 NZ_JJMC01000110.1 RefSeq gene 1606 1681 . + . ID=gene-AB25_RS00700;Name=AB25_RS00700;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS00700;old_locus_tag=AB25_5267 NZ_JJMC01000110.1 tRNAscan-SE tRNA 1606 1681 . + . ID=rna-AB25_RS00700;Parent=gene-AB25_RS00700;anticodon=(pos:1639..1641);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS00700;product=tRNA-Gly NZ_JJMC01000110.1 tRNAscan-SE exon 1606 1681 . + . ID=exon-AB25_RS00700-1;Parent=rna-AB25_RS00700;anticodon=(pos:1639..1641);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS00700;product=tRNA-Gly NZ_JJMC01000110.1 RefSeq gene 1915 1968 . + . ID=gene-AB25_RS31540;Name=AB25_RS31540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31540 NZ_JJMC01000110.1 Protein Homology CDS 1915 1968 . + 0 ID=cds-WP_010723271.1;Parent=gene-AB25_RS31540;Dbxref=GenBank:WP_010723271.1;Name=WP_010723271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791261.1;locus_tag=AB25_RS31540;product=hypothetical protein;protein_id=WP_010723271.1;transl_table=11 NZ_JJMC01000110.1 RefSeq gene 1951 3090 . - . ID=gene-AB25_RS00695;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=AB25_RS00695;old_locus_tag=AB25_5268 NZ_JJMC01000110.1 Protein Homology CDS 1951 3090 . - 0 ID=cds-WP_032171578.1;Parent=gene-AB25_RS00695;Dbxref=GenBank:WP_032171578.1;Name=WP_032171578.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418587.1;locus_tag=AB25_RS00695;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_032171578.1;transl_table=11 NZ_JJMC01000110.1 RefSeq gene 3089 3597 . + . ID=gene-AB25_RS00690;Name=AB25_RS00690;end_range=3597,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00690;old_locus_tag=AB25_5269;partial=true NZ_JJMC01000110.1 Protein Homology CDS 3089 3597 . + 0 ID=cds-WP_032296199.1;Parent=gene-AB25_RS00690;Dbxref=GenBank:WP_032296199.1;Name=WP_032296199.1;end_range=3597,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710032.2;locus_tag=AB25_RS00690;partial=true;product=NAD(P)H-hydrate epimerase;protein_id=WP_032296199.1;transl_table=11 ##sequence-region NZ_JJMC01000111.1 1 731 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000111.1 RefSeq region 1 731 . + . ID=NZ_JJMC01000111.1:1..731;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000111.1 RefSeq gene 28 114 . - . ID=gene-AB25_RS00685;Name=AB25_RS00685;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS00685;old_locus_tag=AB25_5270 NZ_JJMC01000111.1 tRNAscan-SE tRNA 28 114 . - . ID=rna-AB25_RS00685;Parent=gene-AB25_RS00685;anticodon=(pos:complement(78..80));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS00685;product=tRNA-Leu NZ_JJMC01000111.1 tRNAscan-SE exon 28 114 . - . ID=exon-AB25_RS00685-1;Parent=rna-AB25_RS00685;anticodon=(pos:complement(78..80));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS00685;product=tRNA-Leu NZ_JJMC01000111.1 RefSeq gene 149 235 . - . ID=gene-AB25_RS00680;Name=AB25_RS00680;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS00680;old_locus_tag=AB25_5271 NZ_JJMC01000111.1 tRNAscan-SE tRNA 149 235 . - . ID=rna-AB25_RS00680;Parent=gene-AB25_RS00680;anticodon=(pos:complement(199..201));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS00680;product=tRNA-Leu NZ_JJMC01000111.1 tRNAscan-SE exon 149 235 . - . ID=exon-AB25_RS00680-1;Parent=rna-AB25_RS00680;anticodon=(pos:complement(199..201));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS00680;product=tRNA-Leu NZ_JJMC01000111.1 RefSeq gene 264 350 . - . ID=gene-AB25_RS00675;Name=AB25_RS00675;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS00675;old_locus_tag=AB25_5272 NZ_JJMC01000111.1 tRNAscan-SE tRNA 264 350 . - . ID=rna-AB25_RS00675;Parent=gene-AB25_RS00675;anticodon=(pos:complement(314..316));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS00675;product=tRNA-Leu NZ_JJMC01000111.1 tRNAscan-SE exon 264 350 . - . ID=exon-AB25_RS00675-1;Parent=rna-AB25_RS00675;anticodon=(pos:complement(314..316));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS00675;product=tRNA-Leu NZ_JJMC01000111.1 RefSeq gene 379 465 . - . ID=gene-AB25_RS00670;Name=AB25_RS00670;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS00670;old_locus_tag=AB25_5273 NZ_JJMC01000111.1 tRNAscan-SE tRNA 379 465 . - . ID=rna-AB25_RS00670;Parent=gene-AB25_RS00670;anticodon=(pos:complement(429..431));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS00670;product=tRNA-Leu NZ_JJMC01000111.1 tRNAscan-SE exon 379 465 . - . ID=exon-AB25_RS00670-1;Parent=rna-AB25_RS00670;anticodon=(pos:complement(429..431));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS00670;product=tRNA-Leu ##sequence-region NZ_JJMC01000112.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000112.1 RefSeq region 1 2047 . + . ID=NZ_JJMC01000112.1:1..2047;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000112.1 RefSeq gene 1 1411 . - . ID=gene-AB25_RS00665;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=AB25_RS00665;old_locus_tag=AB25_5274;partial=true;start_range=.,1 NZ_JJMC01000112.1 Protein Homology CDS 1 1411 . - 0 ID=cds-WP_032206771.1-2;Parent=gene-AB25_RS00665;Dbxref=GenBank:WP_032206771.1;Name=WP_032206771.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418440.1;locus_tag=AB25_RS00665;partial=true;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WP_032206771.1;start_range=.,1;transl_table=11 NZ_JJMC01000112.1 RefSeq pseudogene 1594 2047 . - . ID=gene-AB25_RS00660;Name=AB25_RS00660;end_range=2047,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS00660;old_locus_tag=AB25_5275;partial=true;pseudo=true NZ_JJMC01000112.1 Protein Homology CDS 1594 2047 . - 1 ID=cds-AB25_RS00660;Parent=gene-AB25_RS00660;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2047,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418439.1;locus_tag=AB25_RS00660;partial=true;product=isocitrate lyase;pseudo=true;transl_table=11 ##sequence-region NZ_JJMC01000113.1 1 4064 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000113.1 RefSeq region 1 4064 . + . ID=NZ_JJMC01000113.1:1..4064;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000113.1 RefSeq gene 1 490 . - . ID=gene-AB25_RS00655;Name=AB25_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00655;old_locus_tag=AB25_5276;partial=true;start_range=.,1 NZ_JJMC01000113.1 Protein Homology CDS 1 490 . - 0 ID=cds-WP_032296200.1;Parent=gene-AB25_RS00655;Dbxref=GenBank:WP_032296200.1;Name=WP_032296200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710032.2;locus_tag=AB25_RS00655;partial=true;product=NAD(P)H-hydrate epimerase;protein_id=WP_032296200.1;start_range=.,1;transl_table=11 NZ_JJMC01000113.1 RefSeq gene 489 1628 . + . ID=gene-AB25_RS00650;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=AB25_RS00650;old_locus_tag=AB25_5277 NZ_JJMC01000113.1 Protein Homology CDS 489 1628 . + 0 ID=cds-WP_032171578.1-2;Parent=gene-AB25_RS00650;Dbxref=GenBank:WP_032171578.1;Name=WP_032171578.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418587.1;locus_tag=AB25_RS00650;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_032171578.1;transl_table=11 NZ_JJMC01000113.1 RefSeq gene 1611 1664 . - . ID=gene-AB25_RS31545;Name=AB25_RS31545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31545 NZ_JJMC01000113.1 Protein Homology CDS 1611 1664 . - 0 ID=cds-WP_010723271.1-2;Parent=gene-AB25_RS31545;Dbxref=GenBank:WP_010723271.1;Name=WP_010723271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791261.1;locus_tag=AB25_RS31545;product=hypothetical protein;protein_id=WP_010723271.1;transl_table=11 NZ_JJMC01000113.1 RefSeq gene 1898 1973 . - . ID=gene-AB25_RS00645;Name=AB25_RS00645;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS00645;old_locus_tag=AB25_5278 NZ_JJMC01000113.1 tRNAscan-SE tRNA 1898 1973 . - . ID=rna-AB25_RS00645;Parent=gene-AB25_RS00645;anticodon=(pos:complement(1938..1940));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS00645;product=tRNA-Gly NZ_JJMC01000113.1 tRNAscan-SE exon 1898 1973 . - . ID=exon-AB25_RS00645-1;Parent=rna-AB25_RS00645;anticodon=(pos:complement(1938..1940));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS00645;product=tRNA-Gly NZ_JJMC01000113.1 RefSeq gene 2009 2084 . - . ID=gene-AB25_RS00640;Name=AB25_RS00640;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS00640;old_locus_tag=AB25_5279 NZ_JJMC01000113.1 tRNAscan-SE tRNA 2009 2084 . - . ID=rna-AB25_RS00640;Parent=gene-AB25_RS00640;anticodon=(pos:complement(2049..2051));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS00640;product=tRNA-Gly NZ_JJMC01000113.1 tRNAscan-SE exon 2009 2084 . - . ID=exon-AB25_RS00640-1;Parent=rna-AB25_RS00640;anticodon=(pos:complement(2049..2051));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS00640;product=tRNA-Gly NZ_JJMC01000113.1 RefSeq gene 2121 2196 . - . ID=gene-AB25_RS00635;Name=AB25_RS00635;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS00635;old_locus_tag=AB25_5280 NZ_JJMC01000113.1 tRNAscan-SE tRNA 2121 2196 . - . ID=rna-AB25_RS00635;Parent=gene-AB25_RS00635;anticodon=(pos:complement(2161..2163));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS00635;product=tRNA-Gly NZ_JJMC01000113.1 tRNAscan-SE exon 2121 2196 . - . ID=exon-AB25_RS00635-1;Parent=rna-AB25_RS00635;anticodon=(pos:complement(2161..2163));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS00635;product=tRNA-Gly NZ_JJMC01000113.1 RefSeq gene 2407 2952 . - . ID=gene-AB25_RS00630;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=AB25_RS00630;old_locus_tag=AB25_5281 NZ_JJMC01000113.1 Protein Homology CDS 2407 2952 . - 0 ID=cds-WP_001295188.1-3;Parent=gene-AB25_RS00630;Dbxref=GenBank:WP_001295188.1;Name=WP_001295188.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882950.1;locus_tag=AB25_RS00630;product=oligoribonuclease;protein_id=WP_001295188.1;transl_table=11 NZ_JJMC01000113.1 RefSeq gene 3047 4064 . + . ID=gene-AB25_RS00625;Name=rsgA;end_range=4064,.;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=AB25_RS00625;old_locus_tag=AB25_5282;partial=true NZ_JJMC01000113.1 Protein Homology CDS 3047 4064 . + 0 ID=cds-WP_032228694.1;Parent=gene-AB25_RS00625;Dbxref=GenBank:WP_032228694.1;Name=WP_032228694.1;Ontology_term=GO:0003924,GO:0005525;end_range=4064,.;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313167.2;locus_tag=AB25_RS00625;partial=true;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WP_032228694.1;transl_table=11 ##sequence-region NZ_JJMC01000114.1 1 3597 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000114.1 RefSeq region 1 3597 . + . ID=NZ_JJMC01000114.1:1..3597;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000114.1 RefSeq gene 1 1771 . + . ID=gene-AB25_RS00620;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=AB25_RS00620;old_locus_tag=AB25_5283;partial=true;start_range=.,1 NZ_JJMC01000114.1 Protein Homology CDS 1 1771 . + 1 ID=cds-WP_032171780.1;Parent=gene-AB25_RS00620;Dbxref=GenBank:WP_032171780.1;Name=WP_032171780.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=AB25_RS00620;partial=true;product=class 1a ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_032171780.1;start_range=.,1;transl_table=11 NZ_JJMC01000114.1 RefSeq gene 1918 3048 . + . ID=gene-AB25_RS00615;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=AB25_RS00615;old_locus_tag=AB25_5284 NZ_JJMC01000114.1 Protein Homology CDS 1918 3048 . + 0 ID=cds-WP_000332036.1-2;Parent=gene-AB25_RS00615;Dbxref=GenBank:WP_000332036.1;Name=WP_000332036.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683700.1;locus_tag=AB25_RS00615;product=class Ia ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000332036.1;transl_table=11 NZ_JJMC01000114.1 RefSeq gene 3048 3302 . + . ID=gene-AB25_RS00610;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=AB25_RS00610;old_locus_tag=AB25_5285 NZ_JJMC01000114.1 Protein Homology CDS 3048 3302 . + 0 ID=cds-WP_000135040.1-2;Parent=gene-AB25_RS00610;Dbxref=GenBank:WP_000135040.1;Name=WP_000135040.1;gbkey=CDS;gene=yfaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416739.1;locus_tag=AB25_RS00610;product=ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE;protein_id=WP_000135040.1;transl_table=11 NZ_JJMC01000114.1 RefSeq gene 3356 3597 . - . ID=gene-AB25_RS00605;Name=AB25_RS00605;end_range=3597,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00605;old_locus_tag=AB25_5286;partial=true NZ_JJMC01000114.1 Protein Homology CDS 3356 3597 . - 2 ID=cds-WP_032171789.1;Parent=gene-AB25_RS00605;Dbxref=GenBank:WP_032171789.1;Name=WP_032171789.1;end_range=3597,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311147.1;locus_tag=AB25_RS00605;partial=true;product=lipopolysaccharide kinase InaA family protein;protein_id=WP_032171789.1;transl_table=11 ##sequence-region NZ_JJMC01000115.1 1 2034 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000115.1 RefSeq region 1 2034 . + . ID=NZ_JJMC01000115.1:1..2034;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000115.1 RefSeq gene 1 440 . + . ID=gene-AB25_RS00600;Name=AB25_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00600;old_locus_tag=AB25_5287;partial=true;start_range=.,1 NZ_JJMC01000115.1 Protein Homology CDS 1 440 . + 2 ID=cds-WP_032171761.1-2;Parent=gene-AB25_RS00600;Dbxref=GenBank:WP_032171761.1;Name=WP_032171761.1;Ontology_term=GO:0004190,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001193550.1;locus_tag=AB25_RS00600;partial=true;product=prepilin peptidase;protein_id=WP_032171761.1;start_range=.,1;transl_table=11 NZ_JJMC01000115.1 RefSeq gene 440 1768 . + . ID=gene-AB25_RS00595;Name=AB25_RS00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00595;old_locus_tag=AB25_5288 NZ_JJMC01000115.1 Protein Homology CDS 440 1768 . + 0 ID=cds-WP_001496394.1;Parent=gene-AB25_RS00595;Dbxref=GenBank:WP_001496394.1;Name=WP_001496394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001566573.1;locus_tag=AB25_RS00595;product=shufflon system plasmid conjugative transfer pilus tip adhesin PilV;protein_id=WP_001496394.1;transl_table=11 ##sequence-region NZ_JJMC01000116.1 1 1498 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000116.1 RefSeq region 1 1498 . + . ID=NZ_JJMC01000116.1:1..1498;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000116.1 RefSeq gene 117 776 . + . ID=gene-AB25_RS00590;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=AB25_RS00590;old_locus_tag=AB25_5290 NZ_JJMC01000116.1 Protein Homology CDS 117 776 . + 0 ID=cds-WP_001159065.1-2;Parent=gene-AB25_RS00590;Dbxref=GenBank:WP_001159065.1;Name=WP_001159065.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=glnP;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=AB25_RS00590;product=glutamine ABC transporter permease GlnP;protein_id=WP_001159065.1;transl_table=11 NZ_JJMC01000116.1 RefSeq gene 773 1495 . + . ID=gene-AB25_RS00585;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=AB25_RS00585;old_locus_tag=AB25_5291 NZ_JJMC01000116.1 Protein Homology CDS 773 1495 . + 0 ID=cds-WP_000569083.1-2;Parent=gene-AB25_RS00585;Dbxref=GenBank:WP_000569083.1;Name=WP_000569083.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=glnQ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569103.1;locus_tag=AB25_RS00585;product=glutamine ABC transporter ATP-binding protein GlnQ;protein_id=WP_000569083.1;transl_table=11 ##sequence-region NZ_JJMC01000117.1 1 1546 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000117.1 RefSeq region 1 1546 . + . ID=NZ_JJMC01000117.1:1..1546;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000117.1 RefSeq gene 1 414 . - . ID=gene-AB25_RS00580;Name=AB25_RS00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00580;old_locus_tag=AB25_5292;partial=true;start_range=.,1 NZ_JJMC01000117.1 Protein Homology CDS 1 414 . - 0 ID=cds-WP_032296201.1;Parent=gene-AB25_RS00580;Dbxref=GenBank:WP_032296201.1;Name=WP_032296201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708769.2;locus_tag=AB25_RS00580;partial=true;product=antirestriction protein;protein_id=WP_032296201.1;start_range=.,1;transl_table=11 NZ_JJMC01000117.1 RefSeq gene 756 1546 . - . ID=gene-AB25_RS0126920;Name=AB25_RS0126920;end_range=1546,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0126920;partial=true NZ_JJMC01000117.1 Protein Homology CDS 756 1546 . - 2 ID=cds-WP_032296202.1;Parent=gene-AB25_RS0126920;Dbxref=GenBank:WP_032296202.1;Name=WP_032296202.1;end_range=1546,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708768.1;locus_tag=AB25_RS0126920;partial=true;product=DUF932 domain-containing protein;protein_id=WP_032296202.1;transl_table=11 ##sequence-region NZ_JJMC01000118.1 1 1585 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000118.1 RefSeq region 1 1585 . + . ID=NZ_JJMC01000118.1:1..1585;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000118.1 RefSeq pseudogene 1 488 . - . ID=gene-AB25_RS00575;Name=arsB;gbkey=Gene;gene=arsB;gene_biotype=pseudogene;locus_tag=AB25_RS00575;old_locus_tag=AB25_5296;partial=true;pseudo=true;start_range=.,1 NZ_JJMC01000118.1 Protein Homology CDS 1 488 . - 0 ID=cds-AB25_RS00575;Parent=gene-AB25_RS00575;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=arsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312401.1;locus_tag=AB25_RS00575;partial=true;product=arsenite/antimonite:H(+) antiporter ArsB;pseudo=true;start_range=.,1;transl_table=11 NZ_JJMC01000118.1 RefSeq gene 542 895 . - . ID=gene-AB25_RS00570;Name=arsR;gbkey=Gene;gene=arsR;gene_biotype=protein_coding;locus_tag=AB25_RS00570;old_locus_tag=AB25_5297 NZ_JJMC01000118.1 Protein Homology CDS 542 895 . - 0 ID=cds-WP_000008957.1-2;Parent=gene-AB25_RS00570;Dbxref=GenBank:WP_000008957.1;Name=WP_000008957.1;gbkey=CDS;gene=arsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417958.1;locus_tag=AB25_RS00570;product=As(III)-sensing metalloregulatory transcriptional repressor ArsR;protein_id=WP_000008957.1;transl_table=11 ##sequence-region NZ_JJMC01000119.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000119.1 RefSeq region 1 2047 . + . ID=NZ_JJMC01000119.1:1..2047;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000119.1 RefSeq gene 1 1064 . + . ID=gene-AB25_RS0126925;Name=AB25_RS0126925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0126925;old_locus_tag=AB25_5299;partial=true;start_range=.,1 NZ_JJMC01000119.1 Protein Homology CDS 1 1064 . + 2 ID=cds-WP_032296205.1;Parent=gene-AB25_RS0126925;Dbxref=GenBank:WP_032296205.1;Name=WP_032296205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417591.1;locus_tag=AB25_RS0126925;partial=true;product=hypothetical protein;protein_id=WP_032296205.1;start_range=.,1;transl_table=11 NZ_JJMC01000119.1 RefSeq gene 1565 1941 . - . ID=gene-AB25_RS27275;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=AB25_RS27275 NZ_JJMC01000119.1 cmsearch RNase_P_RNA 1565 1941 . - . ID=rna-AB25_RS27275;Parent=gene-AB25_RS27275;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS27275;product=RNase P RNA component class A NZ_JJMC01000119.1 cmsearch exon 1565 1941 . - . ID=exon-AB25_RS27275-1;Parent=rna-AB25_RS27275;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS27275;product=RNase P RNA component class A NZ_JJMC01000119.1 RefSeq gene 1974 2047 . - . ID=gene-AB25_RS32615;Name=AB25_RS32615;end_range=2047,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32615;partial=true NZ_JJMC01000119.1 Protein Homology CDS 1974 2047 . - 2 ID=cds-WP_249402588.1;Parent=gene-AB25_RS32615;Dbxref=GenBank:WP_249402588.1;Name=WP_249402588.1;end_range=2047,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312029.2;locus_tag=AB25_RS32615;partial=true;product=hypothetical protein;protein_id=WP_249402588.1;transl_table=11 ##sequence-region NZ_JJMC01000120.1 1 1514 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000120.1 RefSeq region 1 1514 . + . ID=NZ_JJMC01000120.1:1..1514;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000120.1 RefSeq gene 439 681 . - . ID=gene-AB25_RS00560;Name=AB25_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00560;old_locus_tag=AB25_5303 NZ_JJMC01000120.1 Protein Homology CDS 439 681 . - 0 ID=cds-WP_000540588.1;Parent=gene-AB25_RS00560;Dbxref=GenBank:WP_000540588.1;Name=WP_000540588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001398403.1;locus_tag=AB25_RS00560;product=hypothetical protein;protein_id=WP_000540588.1;transl_table=11 NZ_JJMC01000120.1 RefSeq gene 740 1063 . - . ID=gene-AB25_RS00555;Name=AB25_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00555;old_locus_tag=AB25_5304 NZ_JJMC01000120.1 Protein Homology CDS 740 1063 . - 0 ID=cds-WP_000533253.1;Parent=gene-AB25_RS00555;Dbxref=GenBank:WP_000533253.1;Name=WP_000533253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001316561.1;locus_tag=AB25_RS00555;product=hypothetical protein;protein_id=WP_000533253.1;transl_table=11 NZ_JJMC01000120.1 RefSeq pseudogene 1017 1288 . - . ID=gene-AB25_RS33045;Name=AB25_RS33045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS33045;pseudo=true NZ_JJMC01000120.1 Protein Homology CDS 1017 1288 . - 0 ID=cds-AB25_RS33045;Parent=gene-AB25_RS33045;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000547946.1;locus_tag=AB25_RS33045;product=single-stranded DNA-binding protein;pseudo=true;transl_table=11 NZ_JJMC01000120.1 RefSeq pseudogene 1359 1514 . + . ID=gene-AB25_RS32620;Name=AB25_RS32620;end_range=1514,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32620;old_locus_tag=AB25_5305;partial=true;pseudo=true NZ_JJMC01000120.1 Protein Homology CDS 1359 1514 . + 0 ID=cds-AB25_RS32620;Parent=gene-AB25_RS32620;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1514,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052655.1;locus_tag=AB25_RS32620;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_JJMC01000121.1 1 1076 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000121.1 RefSeq region 1 1076 . + . ID=NZ_JJMC01000121.1:1..1076;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000121.1 RefSeq gene 69 929 . + . ID=gene-AB25_RS00550;Name=AB25_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00550;old_locus_tag=AB25_5306 NZ_JJMC01000121.1 Protein Homology CDS 69 929 . + 0 ID=cds-WP_000027057.1;Parent=gene-AB25_RS00550;Dbxref=GenBank:WP_000027057.1;Name=WP_000027057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032489893.1;locus_tag=AB25_RS00550;product=broad-spectrum class A beta-lactamase TEM-1;protein_id=WP_000027057.1;transl_table=11 ##sequence-region NZ_JJMC01000122.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000122.1 RefSeq region 1 2047 . + . ID=NZ_JJMC01000122.1:1..2047;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000122.1 RefSeq gene 1 440 . + . ID=gene-AB25_RS00545;Name=AB25_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00545;old_locus_tag=AB25_5307;partial=true;start_range=.,1 NZ_JJMC01000122.1 Protein Homology CDS 1 440 . + 2 ID=cds-WP_032171761.1-3;Parent=gene-AB25_RS00545;Dbxref=GenBank:WP_032171761.1;Name=WP_032171761.1;Ontology_term=GO:0004190,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001193550.1;locus_tag=AB25_RS00545;partial=true;product=prepilin peptidase;protein_id=WP_032171761.1;start_range=.,1;transl_table=11 NZ_JJMC01000122.1 RefSeq gene 440 1864 . + . ID=gene-AB25_RS00540;Name=AB25_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00540;old_locus_tag=AB25_5308 NZ_JJMC01000122.1 Protein Homology CDS 440 1864 . + 0 ID=cds-WP_001389385.1;Parent=gene-AB25_RS00540;Dbxref=GenBank:WP_001389385.1;Name=WP_001389385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392640.1;locus_tag=AB25_RS00540;product=shufflon system plasmid conjugative transfer pilus tip adhesin PilV;protein_id=WP_001389385.1;transl_table=11 NZ_JJMC01000122.1 RefSeq gene 1861 2047 . - . ID=gene-AB25_RS32160;Name=AB25_RS32160;end_range=2047,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32160;partial=true NZ_JJMC01000122.1 Protein Homology CDS 1861 2047 . - 1 ID=cds-WP_071999019.1;Parent=gene-AB25_RS32160;Dbxref=GenBank:WP_071999019.1;Name=WP_071999019.1;end_range=2047,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012565250.1;locus_tag=AB25_RS32160;partial=true;product=hypothetical protein;protein_id=WP_071999019.1;transl_table=11 ##sequence-region NZ_JJMC01000123.1 1 12950 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000123.1 RefSeq region 1 12950 . + . ID=NZ_JJMC01000123.1:1..12950;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000123.1 RefSeq pseudogene 1 178 . - . ID=gene-AB25_RS32165;Name=AB25_RS32165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32165;old_locus_tag=AB25_5309;partial=true;pseudo=true;start_range=.,1 NZ_JJMC01000123.1 Protein Homology CDS 1 178 . - 0 ID=cds-AB25_RS32165;Parent=gene-AB25_RS32165;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309422.1;locus_tag=AB25_RS32165;partial=true;product=GTPase family protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JJMC01000123.1 RefSeq gene 394 1338 . - . ID=gene-AB25_RS00535;Name=AB25_RS00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00535;old_locus_tag=AB25_5310 NZ_JJMC01000123.1 Protein Homology CDS 394 1338 . - 0 ID=cds-WP_032171640.1;Parent=gene-AB25_RS00535;Dbxref=GenBank:WP_032171640.1;Name=WP_032171640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742131.1;locus_tag=AB25_RS00535;product=hypothetical protein;protein_id=WP_032171640.1;transl_table=11 NZ_JJMC01000123.1 RefSeq gene 1801 2055 . - . ID=gene-AB25_RS31885;Name=AB25_RS31885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS31885 NZ_JJMC01000123.1 GeneMarkS-2+ CDS 1801 2055 . - 0 ID=cds-WP_154670580.1;Parent=gene-AB25_RS31885;Dbxref=GenBank:WP_154670580.1;Name=WP_154670580.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB25_RS31885;product=hypothetical protein;protein_id=WP_154670580.1;transl_table=11 NZ_JJMC01000123.1 RefSeq gene 2337 2576 . + . ID=gene-AB25_RS00530;Name=AB25_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00530;old_locus_tag=AB25_5312 NZ_JJMC01000123.1 Protein Homology CDS 2337 2576 . + 0 ID=cds-WP_001431807.1;Parent=gene-AB25_RS00530;Dbxref=GenBank:WP_001431807.1;Name=WP_001431807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001431807.1;locus_tag=AB25_RS00530;product=HTH-like domain-containing protein;protein_id=WP_001431807.1;transl_table=11 NZ_JJMC01000123.1 RefSeq gene 2616 5054 . + . ID=gene-AB25_RS00525;Name=AB25_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00525;old_locus_tag=AB25_5313 NZ_JJMC01000123.1 Protein Homology CDS 2616 5054 . + 0 ID=cds-WP_000985465.1;Parent=gene-AB25_RS00525;Dbxref=GenBank:WP_000985465.1;Name=WP_000985465.1;Ontology_term=GO:0009307,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001529026.1;locus_tag=AB25_RS00525;product=type I restriction-modification system subunit M;protein_id=WP_000985465.1;transl_table=11 NZ_JJMC01000123.1 RefSeq gene 5054 6388 . + . ID=gene-AB25_RS00520;Name=AB25_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00520;old_locus_tag=AB25_5314 NZ_JJMC01000123.1 Protein Homology CDS 5054 6388 . + 0 ID=cds-WP_000228013.1;Parent=gene-AB25_RS00520;Dbxref=GenBank:WP_000228013.1;Name=WP_000228013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228013.1;locus_tag=AB25_RS00520;product=restriction endonuclease subunit S;protein_id=WP_000228013.1;transl_table=11 NZ_JJMC01000123.1 RefSeq gene 6401 7057 . + . ID=gene-AB25_RS00515;Name=darT;gbkey=Gene;gene=darT;gene_biotype=protein_coding;locus_tag=AB25_RS00515;old_locus_tag=AB25_5315 NZ_JJMC01000123.1 Protein Homology CDS 6401 7057 . + 0 ID=cds-WP_000312833.1;Parent=gene-AB25_RS00515;Dbxref=GenBank:WP_000312833.1;Name=WP_000312833.1;gbkey=CDS;gene=darT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000312835.1;locus_tag=AB25_RS00515;product=toxin-antitoxin system toxin DNA ADP-ribosyl transferase DarT;protein_id=WP_000312833.1;transl_table=11 NZ_JJMC01000123.1 RefSeq gene 7054 8121 . + . ID=gene-AB25_RS00510;Name=darG;gbkey=Gene;gene=darG;gene_biotype=protein_coding;locus_tag=AB25_RS00510;old_locus_tag=AB25_5316 NZ_JJMC01000123.1 Protein Homology CDS 7054 8121 . + 0 ID=cds-WP_000634203.1;Parent=gene-AB25_RS00510;Dbxref=GenBank:WP_000634203.1;Name=WP_000634203.1;gbkey=CDS;gene=darG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000634203.1;locus_tag=AB25_RS00510;product=toxin-antitoxin system antitoxin DNA ADP-ribosyl glycohydrolase DarG;protein_id=WP_000634203.1;transl_table=11 NZ_JJMC01000123.1 RefSeq gene 8140 11235 . + . ID=gene-AB25_RS00505;Name=AB25_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00505;old_locus_tag=AB25_5317 NZ_JJMC01000123.1 Protein Homology CDS 8140 11235 . + 0 ID=cds-WP_000108735.1;Parent=gene-AB25_RS00505;Dbxref=GenBank:WP_000108735.1;Name=WP_000108735.1;Ontology_term=GO:0009307,GO:0003677,GO:0004386,GO:0005524,GO:0009035,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,type I site-specific deoxyribonuclease activity|0009035||IEA,ATP hydrolysis activity|0016887||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015872650.1;locus_tag=AB25_RS00505;product=type I restriction endonuclease subunit R;protein_id=WP_000108735.1;transl_table=11 NZ_JJMC01000123.1 RefSeq gene 11235 11951 . + . ID=gene-AB25_RS00500;Name=AB25_RS00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00500;old_locus_tag=AB25_5318 NZ_JJMC01000123.1 Protein Homology CDS 11235 11951 . + 0 ID=cds-WP_001122107.1;Parent=gene-AB25_RS00500;Dbxref=GenBank:WP_001122107.1;Name=WP_001122107.1;Ontology_term=GO:0006508,GO:0008233,GO:0008237,GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;go_function=peptidase activity|0008233||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012773552.1;locus_tag=AB25_RS00500;product=M48 family metallopeptidase;protein_id=WP_001122107.1;transl_table=11 NZ_JJMC01000123.1 RefSeq pseudogene 12296 12910 . + . ID=gene-AB25_RS00495;Name=AB25_RS00495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS00495;old_locus_tag=AB25_5319;partial=true;pseudo=true;start_range=.,12296 NZ_JJMC01000123.1 Protein Homology CDS 12296 12910 . + 0 ID=cds-AB25_RS00495;Parent=gene-AB25_RS00495;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611998.1;locus_tag=AB25_RS00495;partial=true;product=IS3-like element IS600 family transposase;pseudo=true;start_range=.,12296;transl_table=11 ##sequence-region NZ_JJMC01000124.1 1 4296 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000124.1 RefSeq region 1 4296 . + . ID=NZ_JJMC01000124.1:1..4296;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000124.1 RefSeq gene 1 318 . + . ID=gene-AB25_RS29820;Name=AB25_RS29820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS29820;old_locus_tag=AB25_5320;partial=true;start_range=.,1 NZ_JJMC01000124.1 Protein Homology CDS 1 318 . + 0 ID=cds-WP_050442713.1;Parent=gene-AB25_RS29820;Dbxref=GenBank:WP_050442713.1;Name=WP_050442713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611998.1;locus_tag=AB25_RS29820;partial=true;product=IS3 family transposase;protein_id=WP_050442713.1;start_range=.,1;transl_table=11 NZ_JJMC01000124.1 RefSeq pseudogene 362 1231 . - . ID=gene-AB25_RS00485;Name=AB25_RS00485;end_range=1231,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS00485;old_locus_tag=AB25_5321;partial=true;pseudo=true;start_range=.,362 NZ_JJMC01000124.1 Protein Homology CDS 362 1231 . - 0 ID=cds-AB25_RS00485;Parent=gene-AB25_RS00485;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1231,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_062895919.1;locus_tag=AB25_RS00485;partial=true;product=serine protease autotransporter EspI;pseudo=true;start_range=.,362;transl_table=11 NZ_JJMC01000124.1 RefSeq pseudogene 1243 2121 . + . ID=gene-AB25_RS30860;Name=AB25_RS30860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS30860;partial=true;pseudo=true;start_range=.,1243 NZ_JJMC01000124.1 Protein Homology CDS 1243 2121 . + 0 ID=cds-AB25_RS30860;Parent=gene-AB25_RS30860;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004856299.1;locus_tag=AB25_RS30860;partial=true;product=IS5 family transposase;pseudo=true;start_range=.,1243;transl_table=11 NZ_JJMC01000124.1 RefSeq gene 2142 2939 . - . ID=gene-AB25_RS00480;Name=AB25_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00480;old_locus_tag=AB25_5323 NZ_JJMC01000124.1 Protein Homology CDS 2142 2939 . - 0 ID=cds-WP_021523955.1;Parent=gene-AB25_RS00480;Dbxref=GenBank:WP_021523955.1;Name=WP_021523955.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024242.6;locus_tag=AB25_RS00480;product=AraC family transcriptional regulator;protein_id=WP_021523955.1;transl_table=11 NZ_JJMC01000124.1 RefSeq pseudogene 3352 4296 . + . ID=gene-AB25_RS00470;Name=AB25_RS00470;end_range=4296,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS00470;old_locus_tag=AB25_5325;partial=true;pseudo=true NZ_JJMC01000124.1 Protein Homology CDS 3352 4296 . + 0 ID=cds-AB25_RS00470;Parent=gene-AB25_RS00470;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=4296,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AB25_RS00470;partial=true;product=IS3-like element IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJMC01000125.1 1 3788 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000125.1 RefSeq region 1 3788 . + . ID=NZ_JJMC01000125.1:1..3788;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000125.1 RefSeq pseudogene 108 262 . - . ID=gene-AB25_RS32625;Name=AB25_RS32625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32625;partial=true;pseudo=true;start_range=.,108 NZ_JJMC01000125.1 Protein Homology CDS 108 262 . - 0 ID=cds-AB25_RS32625;Parent=gene-AB25_RS32625;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311849.1;locus_tag=AB25_RS32625;partial=true;product=hypothetical protein;pseudo=true;start_range=.,108;transl_table=11 NZ_JJMC01000125.1 RefSeq gene 777 1007 . + . ID=gene-AB25_RS0126960;Name=AB25_RS0126960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0126960 NZ_JJMC01000125.1 Protein Homology CDS 777 1007 . + 0 ID=cds-WP_000155844.1;Parent=gene-AB25_RS0126960;Dbxref=GenBank:WP_000155844.1;Name=WP_000155844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052652.1;locus_tag=AB25_RS0126960;product=hypothetical protein;protein_id=WP_000155844.1;transl_table=11 NZ_JJMC01000125.1 RefSeq gene 1059 2420 . + . ID=gene-AB25_RS00465;Name=AB25_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00465;old_locus_tag=AB25_5328 NZ_JJMC01000125.1 Protein Homology CDS 1059 2420 . + 0 ID=cds-WP_032296209.1;Parent=gene-AB25_RS00465;Dbxref=GenBank:WP_032296209.1;Name=WP_032296209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052653.1;locus_tag=AB25_RS00465;product=DUF3560 domain-containing protein;protein_id=WP_032296209.1;transl_table=11 NZ_JJMC01000125.1 RefSeq gene 2467 3030 . + . ID=gene-AB25_RS00460;Name=AB25_RS00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00460;old_locus_tag=AB25_5329 NZ_JJMC01000125.1 Protein Homology CDS 2467 3030 . + 0 ID=cds-WP_032296210.1;Parent=gene-AB25_RS00460;Dbxref=GenBank:WP_032296210.1;Name=WP_032296210.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052654.1;locus_tag=AB25_RS00460;product=methyltransferase;protein_id=WP_032296210.1;transl_table=11 NZ_JJMC01000125.1 RefSeq pseudogene 3116 3649 . - . ID=gene-AB25_RS33050;Name=AB25_RS33050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS33050;pseudo=true NZ_JJMC01000125.1 Protein Homology CDS 3116 3649 . - 0 ID=cds-AB25_RS33050;Parent=gene-AB25_RS33050;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001310283.1;locus_tag=AB25_RS33050;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_JJMC01000126.1 1 666 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000126.1 RefSeq region 1 666 . + . ID=NZ_JJMC01000126.1:1..666;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000126.1 RefSeq pseudogene 1 315 . - . ID=gene-AB25_RS00455;Name=AB25_RS00455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS00455;old_locus_tag=AB25_5332;partial=true;pseudo=true;start_range=.,1 NZ_JJMC01000126.1 Protein Homology CDS 1 315 . - 0 ID=cds-AB25_RS00455;Parent=gene-AB25_RS00455;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006939175.1;locus_tag=AB25_RS00455;partial=true;product=IS6-like element IS26 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJMC01000126.1 RefSeq pseudogene 340 645 . + . ID=gene-AB25_RS30880;Name=AB25_RS30880;end_range=645,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS30880;old_locus_tag=AB25_5333;partial=true;pseudo=true NZ_JJMC01000126.1 Protein Homology CDS 340 645 . + 0 ID=cds-AB25_RS30880;Parent=gene-AB25_RS30880;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=645,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AB25_RS30880;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_JJMC01000126.1 cmsearch sequence_feature 603 666 . + . ID=id-NZ_JJMC01000126.1:603..666;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;end_range=666,.;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5;partial=true ##sequence-region NZ_JJMC01000127.1 1 3597 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000127.1 RefSeq region 1 3597 . + . ID=NZ_JJMC01000127.1:1..3597;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000127.1 RefSeq gene 1 154 . + . ID=gene-AB25_RS00450;Name=AB25_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00450;old_locus_tag=AB25_5334;partial=true;start_range=.,1 NZ_JJMC01000127.1 Protein Homology CDS 1 154 . + 1 ID=cds-WP_032171782.1;Parent=gene-AB25_RS00450;Dbxref=GenBank:WP_032171782.1;Name=WP_032171782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311147.1;locus_tag=AB25_RS00450;partial=true;product=lipopolysaccharide kinase InaA family protein;protein_id=WP_032171782.1;start_range=.,1;transl_table=11 NZ_JJMC01000127.1 RefSeq gene 208 462 . - . ID=gene-AB25_RS00445;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=AB25_RS00445;old_locus_tag=AB25_5335 NZ_JJMC01000127.1 Protein Homology CDS 208 462 . - 0 ID=cds-WP_000135040.1-3;Parent=gene-AB25_RS00445;Dbxref=GenBank:WP_000135040.1;Name=WP_000135040.1;gbkey=CDS;gene=yfaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416739.1;locus_tag=AB25_RS00445;product=ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE;protein_id=WP_000135040.1;transl_table=11 NZ_JJMC01000127.1 RefSeq gene 462 1592 . - . ID=gene-AB25_RS00440;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=AB25_RS00440;old_locus_tag=AB25_5336 NZ_JJMC01000127.1 Protein Homology CDS 462 1592 . - 0 ID=cds-WP_000332036.1-3;Parent=gene-AB25_RS00440;Dbxref=GenBank:WP_000332036.1;Name=WP_000332036.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683700.1;locus_tag=AB25_RS00440;product=class Ia ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000332036.1;transl_table=11 NZ_JJMC01000127.1 RefSeq gene 1827 3597 . - . ID=gene-AB25_RS00435;Name=nrdA;end_range=3597,.;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=AB25_RS00435;old_locus_tag=AB25_5337;partial=true NZ_JJMC01000127.1 Protein Homology CDS 1827 3597 . - 1 ID=cds-WP_032171780.1-2;Parent=gene-AB25_RS00435;Dbxref=GenBank:WP_032171780.1;Name=WP_032171780.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;end_range=3597,.;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=AB25_RS00435;partial=true;product=class 1a ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_032171780.1;transl_table=11 ##sequence-region NZ_JJMC01000128.1 1 3039 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000128.1 RefSeq region 1 3039 . + . ID=NZ_JJMC01000128.1:1..3039;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000128.1 RefSeq gene 1 193 . - . ID=gene-AB25_RS00430;Name=AB25_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00430;old_locus_tag=AB25_5338;partial=true;start_range=.,1 NZ_JJMC01000128.1 Protein Homology CDS 1 193 . - 0 ID=cds-WP_001395285.1;Parent=gene-AB25_RS00430;Dbxref=GenBank:WP_001395285.1;Name=WP_001395285.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=AB25_RS00430;partial=true;product=helix-turn-helix domain-containing protein;protein_id=WP_001395285.1;start_range=.,1;transl_table=11 NZ_JJMC01000128.1 RefSeq pseudogene 278 774 . + . ID=gene-AB25_RS00425;Name=AB25_RS00425;end_range=774,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS00425;old_locus_tag=AB25_5339;partial=true;pseudo=true;start_range=.,278 NZ_JJMC01000128.1 Protein Homology CDS 278 774 . + 0 ID=cds-AB25_RS00425;Parent=gene-AB25_RS00425;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=774,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AB25_RS00425;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,278;transl_table=11 NZ_JJMC01000128.1 cmsearch sequence_feature 316 432 . + . ID=id-AB25_RS00425;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS00425;pseudo=true NZ_JJMC01000128.1 RefSeq gene 1447 2955 . + . ID=gene-AB25_RS00420;Name=ltrA;gbkey=Gene;gene=ltrA;gene_biotype=protein_coding;locus_tag=AB25_RS00420;old_locus_tag=AB25_5340 NZ_JJMC01000128.1 Protein Homology CDS 1447 2955 . + 0 ID=cds-WP_001189123.1-5;Parent=gene-AB25_RS00420;Dbxref=GenBank:WP_001189123.1;Name=WP_001189123.1;Ontology_term=GO:0000373,GO:0003964;gbkey=CDS;gene=ltrA;go_function=RNA-directed DNA polymerase activity|0003964||IEA;go_process=Group II intron splicing|0000373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708749.1;locus_tag=AB25_RS00420;product=group II intron reverse transcriptase/maturase;protein_id=WP_001189123.1;transl_table=11 ##sequence-region NZ_JJMC01000129.1 1 1959 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000129.1 RefSeq region 1 1959 . + . ID=NZ_JJMC01000129.1:1..1959;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000129.1 RefSeq pseudogene 1 350 . + . ID=gene-AB25_RS00415;Name=AB25_RS00415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS00415;old_locus_tag=AB25_5341;partial=true;pseudo=true;start_range=.,1 NZ_JJMC01000129.1 Protein Homology CDS 1 350 . + 2 ID=cds-AB25_RS00415;Parent=gene-AB25_RS00415;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=AB25_RS00415;partial=true;product=IS6-like element IS26 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJMC01000129.1 RefSeq gene 446 955 . + . ID=gene-AB25_RS0126985;Name=dfrA8;gbkey=Gene;gene=dfrA8;gene_biotype=protein_coding;locus_tag=AB25_RS0126985;old_locus_tag=AB25_5342 NZ_JJMC01000129.1 Protein Homology CDS 446 955 . + 0 ID=cds-WP_000571065.1;Parent=gene-AB25_RS0126985;Dbxref=GenBank:WP_000571065.1;Name=WP_000571065.1;Ontology_term=GO:0004146;gbkey=CDS;gene=dfrA8;go_function=dihydrofolate reductase activity|0004146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000571065.1;locus_tag=AB25_RS0126985;product=trimethoprim-resistant dihydrofolate reductase DfrA8;protein_id=WP_000571065.1;transl_table=11 NZ_JJMC01000129.1 RefSeq gene 952 1608 . + . ID=gene-AB25_RS0126990;Name=AB25_RS0126990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0126990 NZ_JJMC01000129.1 Protein Homology CDS 952 1608 . + 0 ID=cds-WP_000144779.1;Parent=gene-AB25_RS0126990;Dbxref=GenBank:WP_000144779.1;Name=WP_000144779.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000144779.1;locus_tag=AB25_RS0126990;product=metallophosphoesterase;protein_id=WP_000144779.1;transl_table=11 NZ_JJMC01000129.1 RefSeq pseudogene 1645 1959 . + . ID=gene-AB25_RS00410;Name=AB25_RS00410;end_range=1959,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS00410;old_locus_tag=AB25_5345;partial=true;pseudo=true NZ_JJMC01000129.1 Protein Homology CDS 1645 1959 . + 0 ID=cds-AB25_RS00410;Parent=gene-AB25_RS00410;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=1959,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006939175.1;locus_tag=AB25_RS00410;partial=true;product=IS6-like element IS26 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJMC01000130.1 1 316 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000130.1 RefSeq region 1 316 . + . ID=NZ_JJMC01000130.1:1..316;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000130.1 RefSeq gene 1 172 . + . ID=gene-AB25_RS00405;Name=AB25_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00405;old_locus_tag=AB25_5346;partial=true;start_range=.,1 NZ_JJMC01000130.1 Protein Homology CDS 1 172 . + 1 ID=cds-WP_021535509.1;Parent=gene-AB25_RS00405;Dbxref=GenBank:WP_021535509.1;Name=WP_021535509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309429.1;locus_tag=AB25_RS00405;partial=true;product=antirestriction protein;protein_id=WP_021535509.1;start_range=.,1;transl_table=11 NZ_JJMC01000130.1 RefSeq pseudogene 188 316 . + . ID=gene-AB25_RS32630;Name=AB25_RS32630;end_range=316,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32630;old_locus_tag=AB25_5347;partial=true;pseudo=true NZ_JJMC01000130.1 Protein Homology CDS 188 316 . + 0 ID=cds-AB25_RS32630;Parent=gene-AB25_RS32630;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=316,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310830.1;locus_tag=AB25_RS32630;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_JJMC01000131.1 1 5612 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000131.1 RefSeq region 1 5612 . + . ID=NZ_JJMC01000131.1:1..5612;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000131.1 RefSeq gene 1 318 . + . ID=gene-AB25_RS00395;Name=AB25_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00395;old_locus_tag=AB25_5348;partial=true;start_range=.,1 NZ_JJMC01000131.1 Protein Homology CDS 1 318 . + 0 ID=cds-WP_072114023.1;Parent=gene-AB25_RS00395;Dbxref=GenBank:WP_072114023.1;Name=WP_072114023.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611998.1;locus_tag=AB25_RS00395;partial=true;product=integrase core domain-containing protein;protein_id=WP_072114023.1;start_range=.,1;transl_table=11 NZ_JJMC01000131.1 RefSeq gene 472 2469 . + . ID=gene-AB25_RS00390;Name=AB25_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00390;old_locus_tag=AB25_5349 NZ_JJMC01000131.1 Protein Homology CDS 472 2469 . + 0 ID=cds-WP_001293436.1;Parent=gene-AB25_RS00390;Dbxref=GenBank:WP_001293436.1;Name=WP_001293436.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004119118.1;locus_tag=AB25_RS00390;product=BCCT family transporter;protein_id=WP_001293436.1;transl_table=11 NZ_JJMC01000131.1 RefSeq pseudogene 2532 2870 . + . ID=gene-AB25_RS0127000;Name=AB25_RS0127000;end_range=2870,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS0127000;partial=true;pseudo=true NZ_JJMC01000131.1 Protein Homology CDS 2532 2870 . + 0 ID=cds-AB25_RS0127000;Parent=gene-AB25_RS0127000;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2870,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016239947.1;locus_tag=AB25_RS0127000;partial=true;product=DUF2254 family protein;pseudo=true;transl_table=11 NZ_JJMC01000131.1 RefSeq pseudogene 2880 3368 . - . ID=gene-AB25_RS0127005;Name=AB25_RS0127005;end_range=3368,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS0127005;partial=true;pseudo=true NZ_JJMC01000131.1 Protein Homology CDS 2880 3368 . - 0 ID=cds-AB25_RS0127005;Parent=gene-AB25_RS0127005;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=3368,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611553.1;locus_tag=AB25_RS0127005;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_JJMC01000131.1 RefSeq gene 3449 4957 . - . ID=gene-AB25_RS00385;Name=ltrA;gbkey=Gene;gene=ltrA;gene_biotype=protein_coding;locus_tag=AB25_RS00385;old_locus_tag=AB25_5350 NZ_JJMC01000131.1 Protein Homology CDS 3449 4957 . - 0 ID=cds-WP_001189123.1-6;Parent=gene-AB25_RS00385;Dbxref=GenBank:WP_001189123.1;Name=WP_001189123.1;Ontology_term=GO:0000373,GO:0003964;gbkey=CDS;gene=ltrA;go_function=RNA-directed DNA polymerase activity|0003964||IEA;go_process=Group II intron splicing|0000373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708749.1;locus_tag=AB25_RS00385;product=group II intron reverse transcriptase/maturase;protein_id=WP_001189123.1;transl_table=11 NZ_JJMC01000131.1 RefSeq gene 5386 5612 . + . ID=gene-AB25_RS32175;Name=AB25_RS32175;end_range=5612,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32175;partial=true NZ_JJMC01000131.1 GeneMarkS-2+ CDS 5386 5612 . + 0 ID=cds-WP_279294772.1-4;Parent=gene-AB25_RS32175;Dbxref=GenBank:WP_279294772.1;Name=WP_279294772.1;end_range=5612,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AB25_RS32175;partial=true;product=hypothetical protein;protein_id=WP_279294772.1;transl_table=11 ##sequence-region NZ_JJMC01000132.1 1 1335 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000132.1 RefSeq region 1 1335 . + . ID=NZ_JJMC01000132.1:1..1335;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000132.1 RefSeq gene 1 985 . - . ID=gene-AB25_RS0127015;Name=AB25_RS0127015;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB25_RS0127015;partial=true;start_range=.,1 NZ_JJMC01000132.1 cmsearch rRNA 1 985 . - . ID=rna-AB25_RS0127015;Parent=gene-AB25_RS0127015;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS0127015;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JJMC01000132.1 cmsearch exon 1 985 . - . ID=exon-AB25_RS0127015-1;Parent=rna-AB25_RS0127015;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS0127015;partial=true;product=16S ribosomal RNA;start_range=.,1 ##sequence-region NZ_JJMC01000133.1 1 315 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000133.1 RefSeq region 1 315 . + . ID=NZ_JJMC01000133.1:1..315;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 ##sequence-region NZ_JJMC01000134.1 1 27175 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000134.1 RefSeq region 1 27175 . + . ID=NZ_JJMC01000134.1:1..27175;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000134.1 RefSeq gene 1 1154 . - . ID=gene-AB25_RS00380;Name=AB25_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00380;old_locus_tag=AB25_5352;partial=true;start_range=.,1 NZ_JJMC01000134.1 Protein Homology CDS 1 1154 . - 0 ID=cds-WP_050442714.1;Parent=gene-AB25_RS00380;Dbxref=GenBank:WP_050442714.1;Name=WP_050442714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001499587.1;locus_tag=AB25_RS00380;partial=true;product=shufflon system plasmid conjugative transfer pilus tip adhesin PilV;protein_id=WP_050442714.1;start_range=.,1;transl_table=11 NZ_JJMC01000134.1 RefSeq gene 1154 1810 . - . ID=gene-AB25_RS0127020;Name=AB25_RS0127020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0127020;old_locus_tag=AB25_5353 NZ_JJMC01000134.1 Protein Homology CDS 1154 1810 . - 0 ID=cds-WP_001193553.1;Parent=gene-AB25_RS0127020;Dbxref=GenBank:WP_001193553.1;Name=WP_001193553.1;Ontology_term=GO:0004190,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001193550.1;locus_tag=AB25_RS0127020;product=prepilin peptidase;protein_id=WP_001193553.1;transl_table=11 NZ_JJMC01000134.1 RefSeq gene 1795 2355 . - . ID=gene-AB25_RS0127025;Name=AB25_RS0127025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0127025 NZ_JJMC01000134.1 Protein Homology CDS 1795 2355 . - 0 ID=cds-WP_000014116.1;Parent=gene-AB25_RS0127025;Dbxref=GenBank:WP_000014116.1;Name=WP_000014116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774171.1;locus_tag=AB25_RS0127025;product=lytic transglycosylase domain-containing protein;protein_id=WP_000014116.1;transl_table=11 NZ_JJMC01000134.1 RefSeq gene 2365 2979 . - . ID=gene-AB25_RS0127030;Name=AB25_RS0127030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0127030 NZ_JJMC01000134.1 Protein Homology CDS 2365 2979 . - 0 ID=cds-WP_032171792.1;Parent=gene-AB25_RS0127030;Dbxref=GenBank:WP_032171792.1;Name=WP_032171792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000959783.1;locus_tag=AB25_RS0127030;product=type 4 pilus major pilin;protein_id=WP_032171792.1;transl_table=11 NZ_JJMC01000134.1 RefSeq gene 2998 4095 . - . ID=gene-AB25_RS00375;Name=AB25_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00375;old_locus_tag=AB25_5355 NZ_JJMC01000134.1 Protein Homology CDS 2998 4095 . - 0 ID=cds-WP_001492931.1;Parent=gene-AB25_RS00375;Dbxref=GenBank:WP_001492931.1;Name=WP_001492931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001699973.1;locus_tag=AB25_RS00375;product=type II secretion system F family protein;protein_id=WP_001492931.1;transl_table=11 NZ_JJMC01000134.1 RefSeq gene 4108 5661 . - . ID=gene-AB25_RS00370;Name=AB25_RS00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00370;old_locus_tag=AB25_5356 NZ_JJMC01000134.1 Protein Homology CDS 4108 5661 . - 0 ID=cds-WP_014065739.1;Parent=gene-AB25_RS00370;Dbxref=GenBank:WP_014065739.1;Name=WP_014065739.1;Ontology_term=GO:0009306,GO:0005524,GO:0016887,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000362202.1;locus_tag=AB25_RS00370;product=GspE/PulE family protein;protein_id=WP_014065739.1;transl_table=11 NZ_JJMC01000134.1 RefSeq gene 5672 6124 . - . ID=gene-AB25_RS00365;Name=pilP;gbkey=Gene;gene=pilP;gene_biotype=protein_coding;locus_tag=AB25_RS00365;old_locus_tag=AB25_5357 NZ_JJMC01000134.1 Protein Homology CDS 5672 6124 . - 0 ID=cds-WP_001247870.1;Parent=gene-AB25_RS00365;Dbxref=GenBank:WP_001247870.1;Name=WP_001247870.1;Ontology_term=GO:0009297;gbkey=CDS;gene=pilP;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001247331.1;locus_tag=AB25_RS00365;product=type IV pilus biogenesis protein PilP;protein_id=WP_001247870.1;transl_table=11 NZ_JJMC01000134.1 RefSeq gene 6111 7406 . - . ID=gene-AB25_RS00360;Name=pilO2;gbkey=Gene;gene=pilO2;gene_biotype=protein_coding;locus_tag=AB25_RS00360;old_locus_tag=AB25_5358 NZ_JJMC01000134.1 Protein Homology CDS 6111 7406 . - 0 ID=cds-WP_014065740.1;Parent=gene-AB25_RS00360;Dbxref=GenBank:WP_014065740.1;Name=WP_014065740.1;gbkey=CDS;gene=pilO2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001682966.1;locus_tag=AB25_RS00360;product=type 4b pilus protein PilO2;protein_id=WP_014065740.1;transl_table=11 NZ_JJMC01000134.1 RefSeq gene 7399 9081 . - . ID=gene-AB25_RS00355;Name=AB25_RS00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00355;old_locus_tag=AB25_5359 NZ_JJMC01000134.1 Protein Homology CDS 7399 9081 . - 0 ID=cds-WP_000748143.1;Parent=gene-AB25_RS00355;Dbxref=GenBank:WP_000748143.1;Name=WP_000748143.1;Ontology_term=GO:0009297,GO:0009306,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_process=pilus assembly|0009297||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001744074.1;locus_tag=AB25_RS00355;product=PilN family type IVB pilus formation outer membrane protein;protein_id=WP_000748143.1;transl_table=11 NZ_JJMC01000134.1 RefSeq gene 9095 9532 . - . ID=gene-AB25_RS00350;Name=pilM;gbkey=Gene;gene=pilM;gene_biotype=protein_coding;locus_tag=AB25_RS00350;old_locus_tag=AB25_5360 NZ_JJMC01000134.1 Protein Homology CDS 9095 9532 . - 0 ID=cds-WP_000539807.1;Parent=gene-AB25_RS00350;Dbxref=GenBank:WP_000539807.1;Name=WP_000539807.1;gbkey=CDS;gene=pilM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001744073.1;locus_tag=AB25_RS00350;product=type IV pilus biogenesis protein PilM;protein_id=WP_000539807.1;transl_table=11 NZ_JJMC01000134.1 RefSeq gene 9532 10599 . - . ID=gene-AB25_RS00345;Name=pilL;gbkey=Gene;gene=pilL;gene_biotype=protein_coding;locus_tag=AB25_RS00345;old_locus_tag=AB25_5361 NZ_JJMC01000134.1 Protein Homology CDS 9532 10599 . - 0 ID=cds-WP_032171795.1;Parent=gene-AB25_RS00345;Dbxref=GenBank:WP_032171795.1;Name=WP_032171795.1;gbkey=CDS;gene=pilL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001604530.1;locus_tag=AB25_RS00345;product=type IV pilus biogenesis lipoprotein PilL;protein_id=WP_032171795.1;transl_table=11 NZ_JJMC01000134.1 RefSeq gene 10633 11223 . - . ID=gene-AB25_RS32875;Name=AB25_RS32875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32875 NZ_JJMC01000134.1 Protein Homology CDS 10633 11223 . - 0 ID=cds-WP_001542533.1;Parent=gene-AB25_RS32875;Dbxref=GenBank:WP_001542533.1;Name=WP_001542533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001334619.1;locus_tag=AB25_RS32875;product=hypothetical protein;protein_id=WP_001542533.1;transl_table=11 NZ_JJMC01000134.1 RefSeq gene 11273 11602 . - . ID=gene-AB25_RS0127035;Name=AB25_RS0127035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0127035 NZ_JJMC01000134.1 Protein Homology CDS 11273 11602 . - 0 ID=cds-WP_032171796.1;Parent=gene-AB25_RS0127035;Dbxref=GenBank:WP_032171796.1;Name=WP_032171796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000008891.1;locus_tag=AB25_RS0127035;product=hypothetical protein;protein_id=WP_032171796.1;transl_table=11 NZ_JJMC01000134.1 RefSeq gene 11645 11899 . - . ID=gene-AB25_RS0127040;Name=AB25_RS0127040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0127040 NZ_JJMC01000134.1 Protein Homology CDS 11645 11899 . - 0 ID=cds-WP_001136187.1;Parent=gene-AB25_RS0127040;Dbxref=GenBank:WP_001136187.1;Name=WP_001136187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001136193.1;locus_tag=AB25_RS0127040;product=PilI type IV pilus biogenesis protein;protein_id=WP_001136187.1;transl_table=11 NZ_JJMC01000134.1 RefSeq gene 12071 12754 . - . ID=gene-AB25_RS00340;Name=AB25_RS00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00340;old_locus_tag=AB25_5364 NZ_JJMC01000134.1 Protein Homology CDS 12071 12754 . - 0 ID=cds-WP_032171798.1;Parent=gene-AB25_RS00340;Dbxref=GenBank:WP_032171798.1;Name=WP_032171798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213862.1;locus_tag=AB25_RS00340;product=conjugal transfer protein TraC;protein_id=WP_032171798.1;transl_table=11 NZ_JJMC01000134.1 RefSeq gene 13008 13541 . - . ID=gene-AB25_RS0127045;Name=AB25_RS0127045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0127045 NZ_JJMC01000134.1 Protein Homology CDS 13008 13541 . - 0 ID=cds-WP_001372168.1;Parent=gene-AB25_RS0127045;Dbxref=GenBank:WP_001372168.1;Name=WP_001372168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001303319.1;locus_tag=AB25_RS0127045;product=transcription termination/antitermination NusG family protein;protein_id=WP_001372168.1;transl_table=11 NZ_JJMC01000134.1 RefSeq gene 13983 14270 . - . ID=gene-AB25_RS0127050;Name=AB25_RS0127050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0127050 NZ_JJMC01000134.1 Protein Homology CDS 13983 14270 . - 0 ID=cds-WP_000074855.1;Parent=gene-AB25_RS0127050;Dbxref=GenBank:WP_000074855.1;Name=WP_000074855.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000074849.1;locus_tag=AB25_RS0127050;product=helix-turn-helix transcriptional regulator;protein_id=WP_000074855.1;transl_table=11 NZ_JJMC01000134.1 RefSeq gene 14188 14451 . - . ID=gene-AB25_RS33055;Name=AB25_RS33055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS33055 NZ_JJMC01000134.1 Protein Homology CDS 14188 14451 . - 0 ID=cds-WP_001387472.1;Parent=gene-AB25_RS33055;Dbxref=GenBank:WP_001387472.1;Name=WP_001387472.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022029.6;locus_tag=AB25_RS33055;product=ash family protein;protein_id=WP_001387472.1;transl_table=11 NZ_JJMC01000134.1 RefSeq gene 15423 16454 . + . ID=gene-AB25_RS00335;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=AB25_RS00335;old_locus_tag=AB25_5367 NZ_JJMC01000134.1 Protein Homology CDS 15423 16454 . + 0 ID=cds-WP_023518831.1;Parent=gene-AB25_RS00335;Dbxref=GenBank:WP_023518831.1;Name=WP_023518831.1;Ontology_term=GO:0006276;gbkey=CDS;gene=repA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907860.1;locus_tag=AB25_RS00335;product=plasmid replication initiator RepA;protein_id=WP_023518831.1;transl_table=11 NZ_JJMC01000134.1 RefSeq gene 17523 18032 . - . ID=gene-AB25_RS0127065;Name=AB25_RS0127065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0127065 NZ_JJMC01000134.1 Protein Homology CDS 17523 18032 . - 0 ID=cds-WP_012783913.1;Parent=gene-AB25_RS0127065;Dbxref=GenBank:WP_012783913.1;Name=WP_012783913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016231297.1;locus_tag=AB25_RS0127065;product=hypothetical protein;protein_id=WP_012783913.1;transl_table=11 NZ_JJMC01000134.1 RefSeq gene 18088 18690 . - . ID=gene-AB25_RS00330;Name=AB25_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00330;old_locus_tag=AB25_5370 NZ_JJMC01000134.1 Protein Homology CDS 18088 18690 . - 0 ID=cds-WP_000517687.1;Parent=gene-AB25_RS00330;Dbxref=GenBank:WP_000517687.1;Name=WP_000517687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001697843.1;locus_tag=AB25_RS00330;product=ProQ/FINO family protein;protein_id=WP_000517687.1;transl_table=11 NZ_JJMC01000134.1 RefSeq gene 19043 20389 . + . ID=gene-AB25_RS00325;Name=yagA;gbkey=Gene;gene=yagA;gene_biotype=protein_coding;locus_tag=AB25_RS00325;old_locus_tag=AB25_5371 NZ_JJMC01000134.1 Protein Homology CDS 19043 20389 . + 0 ID=cds-WP_001132021.1;Parent=gene-AB25_RS00325;Dbxref=GenBank:WP_001132021.1;Name=WP_001132021.1;gbkey=CDS;gene=yagA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001132032.1;locus_tag=AB25_RS00325;product=protein YagA;protein_id=WP_001132021.1;transl_table=11 NZ_JJMC01000134.1 RefSeq gene 20956 21258 . - . ID=gene-AB25_RS32180;Name=AB25_RS32180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32180 NZ_JJMC01000134.1 Protein Homology CDS 20956 21258 . - 0 ID=cds-WP_001245884.1;Parent=gene-AB25_RS32180;Dbxref=GenBank:WP_001245884.1;Name=WP_001245884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001245884.1;locus_tag=AB25_RS32180;product=hypothetical protein;protein_id=WP_001245884.1;transl_table=11 NZ_JJMC01000134.1 RefSeq gene 21255 21881 . - . ID=gene-AB25_RS00320;Name=AB25_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00320;old_locus_tag=AB25_5372 NZ_JJMC01000134.1 Protein Homology CDS 21255 21881 . - 0 ID=cds-WP_000587689.1;Parent=gene-AB25_RS00320;Dbxref=GenBank:WP_000587689.1;Name=WP_000587689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010260829.1;locus_tag=AB25_RS00320;product=ParA family plasmid-partitioning AAA ATPase;protein_id=WP_000587689.1;transl_table=11 NZ_JJMC01000134.1 RefSeq gene 22077 23348 . - . ID=gene-AB25_RS00315;Name=AB25_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00315;old_locus_tag=AB25_5373 NZ_JJMC01000134.1 Protein Homology CDS 22077 23348 . - 0 ID=cds-WP_032171800.1;Parent=gene-AB25_RS00315;Dbxref=GenBank:WP_032171800.1;Name=WP_032171800.1;Ontology_term=GO:0006974,GO:0009432,GO:0019985,GO:0042276,GO:0003684,GO:0003887;gbkey=CDS;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA damage response|0006974||IEA,SOS response|0009432||IEA,translesion synthesis|0019985||IEA,error-prone translesion synthesis|0042276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001744069.1;locus_tag=AB25_RS00315;product=Y-family DNA polymerase;protein_id=WP_032171800.1;transl_table=11 NZ_JJMC01000134.1 RefSeq gene 23348 23785 . - . ID=gene-AB25_RS00310;Name=umuD;gbkey=Gene;gene=umuD;gene_biotype=protein_coding;locus_tag=AB25_RS00310;old_locus_tag=AB25_5374 NZ_JJMC01000134.1 Protein Homology CDS 23348 23785 . - 0 ID=cds-WP_000109071.1;Parent=gene-AB25_RS00310;Dbxref=GenBank:WP_000109071.1;Name=WP_000109071.1;Ontology_term=GO:0003677;gbkey=CDS;gene=umuD;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536590.1;locus_tag=AB25_RS00310;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WP_000109071.1;transl_table=11 NZ_JJMC01000134.1 RefSeq gene 23782 24030 . - . ID=gene-AB25_RS00305;Name=AB25_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00305;old_locus_tag=AB25_5375 NZ_JJMC01000134.1 Protein Homology CDS 23782 24030 . - 0 ID=cds-WP_000618110.1;Parent=gene-AB25_RS00305;Dbxref=GenBank:WP_000618110.1;Name=WP_000618110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001697964.1;locus_tag=AB25_RS00305;product=DinI-like family protein;protein_id=WP_000618110.1;transl_table=11 NZ_JJMC01000134.1 RefSeq gene 24448 25350 . + . ID=gene-AB25_RS00300;Name=AB25_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00300;old_locus_tag=AB25_5376 NZ_JJMC01000134.1 Protein Homology CDS 24448 25350 . + 0 ID=cds-WP_204361937.1;Parent=gene-AB25_RS00300;Dbxref=GenBank:WP_204361937.1;Name=WP_204361937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052643.1;locus_tag=AB25_RS00300;product=DUF1281 domain-containing protein;protein_id=WP_204361937.1;transl_table=11 NZ_JJMC01000134.1 RefSeq gene 25347 25658 . + . ID=gene-AB25_RS30895;Name=AB25_RS30895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS30895 NZ_JJMC01000134.1 Protein Homology CDS 25347 25658 . + 0 ID=cds-WP_032296218.1;Parent=gene-AB25_RS30895;Dbxref=GenBank:WP_032296218.1;Name=WP_032296218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858330.2;locus_tag=AB25_RS30895;product=hypothetical protein;protein_id=WP_032296218.1;transl_table=11 NZ_JJMC01000134.1 RefSeq gene 25735 26418 . + . ID=gene-AB25_RS00295;Name=AB25_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00295;old_locus_tag=AB25_5379 NZ_JJMC01000134.1 Protein Homology CDS 25735 26418 . + 0 ID=cds-WP_000085939.1;Parent=gene-AB25_RS00295;Dbxref=GenBank:WP_000085939.1;Name=WP_000085939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052645.1;locus_tag=AB25_RS00295;product=DNA methylase;protein_id=WP_000085939.1;transl_table=11 NZ_JJMC01000134.1 RefSeq gene 26419 26640 . + . ID=gene-AB25_RS00290;Name=AB25_RS00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00290;old_locus_tag=AB25_5380 NZ_JJMC01000134.1 Protein Homology CDS 26419 26640 . + 0 ID=cds-WP_001104905.1;Parent=gene-AB25_RS00290;Dbxref=GenBank:WP_001104905.1;Name=WP_001104905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_958723.1;locus_tag=AB25_RS00290;product=hypothetical protein;protein_id=WP_001104905.1;transl_table=11 NZ_JJMC01000134.1 RefSeq gene 26534 27088 . + . ID=gene-AB25_RS00285;Name=AB25_RS00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00285;old_locus_tag=AB25_5381 NZ_JJMC01000134.1 Protein Homology CDS 26534 27088 . + 0 ID=cds-WP_077754734.1;Parent=gene-AB25_RS00285;Dbxref=GenBank:WP_077754734.1;Name=WP_077754734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052646.1;locus_tag=AB25_RS00285;product=DUF1380 family protein;protein_id=WP_077754734.1;transl_table=11 ##sequence-region NZ_JJMC01000135.1 1 323 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000135.1 RefSeq region 1 323 . + . ID=NZ_JJMC01000135.1:1..323;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000135.1 RefSeq pseudogene 165 323 . - . ID=gene-AB25_RS32185;Name=AB25_RS32185;end_range=323,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32185;old_locus_tag=AB25_5382;partial=true;pseudo=true NZ_JJMC01000135.1 Protein Homology CDS 165 323 . - 0 ID=cds-AB25_RS32185;Parent=gene-AB25_RS32185;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=323,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708749.1;locus_tag=AB25_RS32185;partial=true;product=group II intron reverse transcriptase/maturase;pseudo=true;transl_table=11 ##sequence-region NZ_JJMC01000136.1 1 1137 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000136.1 RefSeq region 1 1137 . + . ID=NZ_JJMC01000136.1:1..1137;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000136.1 RefSeq gene 1 378 . - . ID=gene-AB25_RS00280;Name=AB25_RS00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00280;old_locus_tag=AB25_5383;partial=true;start_range=.,1 NZ_JJMC01000136.1 Protein Homology CDS 1 378 . - 0 ID=cds-WP_032296220.1;Parent=gene-AB25_RS00280;Dbxref=GenBank:WP_032296220.1;Name=WP_032296220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309429.1;locus_tag=AB25_RS00280;partial=true;product=antirestriction protein;protein_id=WP_032296220.1;start_range=.,1;transl_table=11 NZ_JJMC01000136.1 RefSeq gene 470 1137 . - . ID=gene-AB25_RS00275;Name=AB25_RS00275;end_range=1137,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00275;old_locus_tag=AB25_5384;partial=true NZ_JJMC01000136.1 Protein Homology CDS 470 1137 . - 2 ID=cds-WP_032296221.1;Parent=gene-AB25_RS00275;Dbxref=GenBank:WP_032296221.1;Name=WP_032296221.1;end_range=1137,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708768.1;locus_tag=AB25_RS00275;partial=true;product=DUF932 domain-containing protein;protein_id=WP_032296221.1;transl_table=11 ##sequence-region NZ_JJMC01000137.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000137.1 RefSeq region 1 2047 . + . ID=NZ_JJMC01000137.1:1..2047;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000137.1 RefSeq gene 1 258 . + . ID=gene-AB25_RS00270;Name=AB25_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00270;old_locus_tag=AB25_5385;partial=true;start_range=.,1 NZ_JJMC01000137.1 Protein Homology CDS 1 258 . + 0 ID=cds-WP_032170803.1;Parent=gene-AB25_RS00270;Dbxref=GenBank:WP_032170803.1;Name=WP_032170803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707825.2;locus_tag=AB25_RS00270;partial=true;product=flagellar assembly protein FliH;protein_id=WP_032170803.1;start_range=.,1;transl_table=11 NZ_JJMC01000137.1 RefSeq gene 258 1631 . + . ID=gene-AB25_RS00265;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=AB25_RS00265;old_locus_tag=AB25_5386 NZ_JJMC01000137.1 Protein Homology CDS 258 1631 . + 0 ID=cds-WP_000213294.1;Parent=gene-AB25_RS00265;Dbxref=GenBank:WP_000213294.1;Name=WP_000213294.1;Ontology_term=GO:0044780,GO:0071973,GO:0016887;gbkey=CDS;gene=fliI;go_function=ATP hydrolysis activity|0016887||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416451.1;locus_tag=AB25_RS00265;product=flagellar protein export ATPase FliI;protein_id=WP_000213294.1;transl_table=11 NZ_JJMC01000137.1 RefSeq gene 1650 2047 . + . ID=gene-AB25_RS00260;Name=fliJ;end_range=2047,.;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=AB25_RS00260;old_locus_tag=AB25_5387;partial=true NZ_JJMC01000137.1 Protein Homology CDS 1650 2047 . + 0 ID=cds-WP_032296223.1;Parent=gene-AB25_RS00260;Dbxref=GenBank:WP_032296223.1;Name=WP_032296223.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;end_range=2047,.;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310708.1;locus_tag=AB25_RS00260;partial=true;product=flagellar export protein FliJ;protein_id=WP_032296223.1;transl_table=11 ##sequence-region NZ_JJMC01000138.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000138.1 RefSeq region 1 2047 . + . ID=NZ_JJMC01000138.1:1..2047;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000138.1 RefSeq pseudogene 1 2047 . + . ID=gene-AB25_RS00255;Name=ehaG;end_range=2047,.;gbkey=Gene;gene=ehaG;gene_biotype=pseudogene;locus_tag=AB25_RS00255;old_locus_tag=AB25_5388;partial=true;pseudo=true;start_range=.,1 NZ_JJMC01000138.1 Protein Homology CDS 1 2047 . + 1 ID=cds-AB25_RS00255;Parent=gene-AB25_RS00255;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=2047,.;gbkey=CDS;gene=ehaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312507.1;locus_tag=AB25_RS00255;partial=true;product=trimeric autotransporter adhesin EhaG;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JJMC01000139.1 1 455 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000139.1 RefSeq region 1 455 . + . ID=NZ_JJMC01000139.1:1..455;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000139.1 RefSeq gene 9 124 . - . ID=gene-AB25_RS00250;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AB25_RS00250;old_locus_tag=AB25_5389 NZ_JJMC01000139.1 cmsearch rRNA 9 124 . - . ID=rna-AB25_RS00250;Parent=gene-AB25_RS00250;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS00250;product=5S ribosomal RNA NZ_JJMC01000139.1 cmsearch exon 9 124 . - . ID=exon-AB25_RS00250-1;Parent=rna-AB25_RS00250;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS00250;product=5S ribosomal RNA NZ_JJMC01000139.1 RefSeq gene 164 239 . - . ID=gene-AB25_RS00245;Name=AB25_RS00245;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS00245;old_locus_tag=AB25_5390 NZ_JJMC01000139.1 tRNAscan-SE tRNA 164 239 . - . ID=rna-AB25_RS00245;Parent=gene-AB25_RS00245;anticodon=(pos:complement(204..206));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS00245;product=tRNA-Thr NZ_JJMC01000139.1 tRNAscan-SE exon 164 239 . - . ID=exon-AB25_RS00245-1;Parent=rna-AB25_RS00245;anticodon=(pos:complement(204..206));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS00245;product=tRNA-Thr NZ_JJMC01000139.1 RefSeq gene 254 369 . - . ID=gene-AB25_RS00240;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AB25_RS00240;old_locus_tag=AB25_5391 NZ_JJMC01000139.1 cmsearch rRNA 254 369 . - . ID=rna-AB25_RS00240;Parent=gene-AB25_RS00240;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS00240;product=5S ribosomal RNA NZ_JJMC01000139.1 cmsearch exon 254 369 . - . ID=exon-AB25_RS00240-1;Parent=rna-AB25_RS00240;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AB25_RS00240;product=5S ribosomal RNA ##sequence-region NZ_JJMC01000140.1 1 2910 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000140.1 RefSeq region 1 2910 . + . ID=NZ_JJMC01000140.1:1..2910;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000140.1 RefSeq pseudogene 1 282 . - . ID=gene-AB25_RS00235;Name=AB25_RS00235;end_range=282,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS00235;old_locus_tag=AB25_5392;partial=true;pseudo=true;start_range=.,1 NZ_JJMC01000140.1 Protein Homology CDS 1 282 . - 0 ID=cds-AB25_RS00235;Parent=gene-AB25_RS00235;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=282,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099160.1;locus_tag=AB25_RS00235;partial=true;product=IS66 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJMC01000140.1 RefSeq pseudogene 288 542 . - . ID=gene-AB25_RS0127080;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=pseudogene;locus_tag=AB25_RS0127080;old_locus_tag=AB25_5393;partial=true;pseudo=true;start_range=.,288 NZ_JJMC01000140.1 Protein Homology CDS 288 542 . - 0 ID=cds-AB25_RS0127080;Parent=gene-AB25_RS0127080;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536669.1;locus_tag=AB25_RS0127080;partial=true;product=IS66 family insertion sequence element accessory protein TnpB;pseudo=true;start_range=.,288;transl_table=11 NZ_JJMC01000140.1 RefSeq gene 539 943 . - . ID=gene-AB25_RS00230;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AB25_RS00230;old_locus_tag=AB25_5394 NZ_JJMC01000140.1 Protein Homology CDS 539 943 . - 0 ID=cds-WP_032170756.1;Parent=gene-AB25_RS00230;Dbxref=GenBank:WP_032170756.1;Name=WP_032170756.1;gbkey=CDS;gene=tnpA;inference=COORDINATES: protein motif:HMM:NF047595.1;locus_tag=AB25_RS00230;product=IS66-like element accessory protein TnpA;protein_id=WP_032170756.1;transl_table=11 NZ_JJMC01000140.1 RefSeq pseudogene 1009 2355 . + . ID=gene-AB25_RS31560;Name=AB25_RS31560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS31560;pseudo=true NZ_JJMC01000140.1 Protein Homology CDS 1009 2355 . + 0 ID=cds-AB25_RS31560;Parent=gene-AB25_RS31560;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012767745.1;locus_tag=AB25_RS31560;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_JJMC01000140.1 RefSeq pseudogene 2403 2588 . + . ID=gene-AB25_RS0127095;Name=AB25_RS0127095;end_range=2588,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS0127095;partial=true;pseudo=true NZ_JJMC01000140.1 Protein Homology CDS 2403 2588 . + 0 ID=cds-AB25_RS0127095;Parent=gene-AB25_RS0127095;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=2588,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751479.1;locus_tag=AB25_RS0127095;partial=true;product=transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJMC01000141.1 1 3415 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000141.1 RefSeq region 1 3415 . + . ID=NZ_JJMC01000141.1:1..3415;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000141.1 RefSeq pseudogene 66 271 . + . ID=gene-AB25_RS33060;Name=AB25_RS33060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS33060;pseudo=true NZ_JJMC01000141.1 Protein Homology CDS 66 271 . + 0 ID=cds-AB25_RS33060;Parent=gene-AB25_RS33060;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000547968.1;locus_tag=AB25_RS33060;product=single-stranded DNA-binding protein;pseudo=true;transl_table=11 NZ_JJMC01000141.1 RefSeq gene 297 824 . + . ID=gene-AB25_RS00225;Name=AB25_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00225;old_locus_tag=AB25_5398 NZ_JJMC01000141.1 Protein Homology CDS 297 824 . + 0 ID=cds-WP_000290816.1;Parent=gene-AB25_RS00225;Dbxref=GenBank:WP_000290816.1;Name=WP_000290816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052656.1;locus_tag=AB25_RS00225;product=single-stranded DNA-binding protein;protein_id=WP_000290816.1;transl_table=11 NZ_JJMC01000141.1 RefSeq gene 880 1113 . + . ID=gene-AB25_RS00220;Name=AB25_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00220;old_locus_tag=AB25_5399 NZ_JJMC01000141.1 Protein Homology CDS 880 1113 . + 0 ID=cds-WP_000005971.1;Parent=gene-AB25_RS00220;Dbxref=GenBank:WP_000005971.1;Name=WP_000005971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_958724.1;locus_tag=AB25_RS00220;product=DUF905 domain-containing protein;protein_id=WP_000005971.1;transl_table=11 NZ_JJMC01000141.1 RefSeq pseudogene 1202 2491 . + . ID=gene-AB25_RS00215;Name=AB25_RS00215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS00215;old_locus_tag=AB25_5400;partial=true;pseudo=true;start_range=.,1202 NZ_JJMC01000141.1 Protein Homology CDS 1202 2491 . + 0 ID=cds-AB25_RS00215;Parent=gene-AB25_RS00215;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052657.1;locus_tag=AB25_RS00215;partial=true;product=ParB/RepB/Spo0J family partition protein;pseudo=true;start_range=.,1202;transl_table=11 NZ_JJMC01000141.1 RefSeq gene 2546 2980 . + . ID=gene-AB25_RS00210;Name=psiB;gbkey=Gene;gene=psiB;gene_biotype=protein_coding;locus_tag=AB25_RS00210;old_locus_tag=AB25_5401 NZ_JJMC01000141.1 Protein Homology CDS 2546 2980 . + 0 ID=cds-WP_000845949.1;Parent=gene-AB25_RS00210;Dbxref=GenBank:WP_000845949.1;Name=WP_000845949.1;gbkey=CDS;gene=psiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000845953.1;locus_tag=AB25_RS00210;product=conjugation system SOS inhibitor PsiB;protein_id=WP_000845949.1;transl_table=11 NZ_JJMC01000141.1 RefSeq gene 2977 3415 . + . ID=gene-AB25_RS00205;Name=AB25_RS00205;end_range=3415,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00205;old_locus_tag=AB25_5402;partial=true NZ_JJMC01000141.1 Protein Homology CDS 2977 3415 . + 0 ID=cds-WP_032261636.1;Parent=gene-AB25_RS00205;Dbxref=GenBank:WP_032261636.1;Name=WP_032261636.1;end_range=3415,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052659.1;locus_tag=AB25_RS00205;partial=true;product=plasmid SOS inhibition protein A;protein_id=WP_032261636.1;transl_table=11 ##sequence-region NZ_JJMC01000142.1 1 4025 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000142.1 RefSeq region 1 4025 . + . ID=NZ_JJMC01000142.1:1..4025;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000142.1 RefSeq gene 3 203 . + . ID=gene-AB25_RS32190;Name=AB25_RS32190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS32190 NZ_JJMC01000142.1 Protein Homology CDS 3 203 . + 0 ID=cds-WP_244585751.1;Parent=gene-AB25_RS32190;Dbxref=GenBank:WP_244585751.1;Name=WP_244585751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000547946.1;locus_tag=AB25_RS32190;product=single-stranded DNA-binding protein;protein_id=WP_244585751.1;transl_table=11 NZ_JJMC01000142.1 RefSeq gene 229 768 . + . ID=gene-AB25_RS00200;Name=AB25_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00200;old_locus_tag=AB25_5403 NZ_JJMC01000142.1 Protein Homology CDS 229 768 . + 0 ID=cds-WP_000290840.1;Parent=gene-AB25_RS00200;Dbxref=GenBank:WP_000290840.1;Name=WP_000290840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052656.1;locus_tag=AB25_RS00200;product=single-stranded DNA-binding protein;protein_id=WP_000290840.1;transl_table=11 NZ_JJMC01000142.1 RefSeq gene 836 1069 . + . ID=gene-AB25_RS00195;Name=AB25_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00195;old_locus_tag=AB25_5404 NZ_JJMC01000142.1 Protein Homology CDS 836 1069 . + 0 ID=cds-WP_000005990.1;Parent=gene-AB25_RS00195;Dbxref=GenBank:WP_000005990.1;Name=WP_000005990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_958724.1;locus_tag=AB25_RS00195;product=DUF905 family protein;protein_id=WP_000005990.1;transl_table=11 NZ_JJMC01000142.1 RefSeq pseudogene 1091 1294 . + . ID=gene-AB25_RS29940;Name=AB25_RS29940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS29940;old_locus_tag=AB25_5405;partial=true;pseudo=true;start_range=.,1091 NZ_JJMC01000142.1 Protein Homology CDS 1091 1294 . + 0 ID=cds-AB25_RS29940;Parent=gene-AB25_RS29940;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052657.1;locus_tag=AB25_RS29940;partial=true;product=ParB/RepB/Spo0J family partition protein;pseudo=true;start_range=.,1091;transl_table=11 NZ_JJMC01000142.1 RefSeq gene 1349 1783 . + . ID=gene-AB25_RS00190;Name=psiB;gbkey=Gene;gene=psiB;gene_biotype=protein_coding;locus_tag=AB25_RS00190;old_locus_tag=AB25_5406 NZ_JJMC01000142.1 Protein Homology CDS 1349 1783 . + 0 ID=cds-WP_000845937.1;Parent=gene-AB25_RS00190;Dbxref=GenBank:WP_000845937.1;Name=WP_000845937.1;gbkey=CDS;gene=psiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000845953.1;locus_tag=AB25_RS00190;product=conjugation system SOS inhibitor PsiB;protein_id=WP_000845937.1;transl_table=11 NZ_JJMC01000142.1 RefSeq gene 1780 2499 . + . ID=gene-AB25_RS00185;Name=AB25_RS00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00185;old_locus_tag=AB25_5407 NZ_JJMC01000142.1 Protein Homology CDS 1780 2499 . + 0 ID=cds-WP_032296226.1;Parent=gene-AB25_RS00185;Dbxref=GenBank:WP_032296226.1;Name=WP_032296226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001763821.1;locus_tag=AB25_RS00185;product=plasmid SOS inhibition protein A;protein_id=WP_032296226.1;transl_table=11 NZ_JJMC01000142.1 RefSeq gene 2499 3017 . + . ID=gene-AB25_RS00180;Name=AB25_RS00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00180;old_locus_tag=AB25_5408 NZ_JJMC01000142.1 Protein Homology CDS 2499 3017 . + 0 ID=cds-WP_001696679.1;Parent=gene-AB25_RS00180;Dbxref=GenBank:WP_001696679.1;Name=WP_001696679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004101284.1;locus_tag=AB25_RS00180;product=hypothetical protein;protein_id=WP_001696679.1;transl_table=11 NZ_JJMC01000142.1 RefSeq pseudogene 3135 3287 . + . ID=gene-AB25_RS32640;Name=AB25_RS32640;end_range=3287,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32640;partial=true;pseudo=true NZ_JJMC01000142.1 Protein Homology CDS 3135 3287 . + 0 ID=cds-AB25_RS32640;Parent=gene-AB25_RS32640;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3287,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF010277.0;locus_tag=AB25_RS32640;partial=true;product=DUF5431 family protein;pseudo=true;transl_table=11 NZ_JJMC01000142.1 RefSeq gene 3232 3354 . + . ID=gene-AB25_RS0127105;Name=AB25_RS0127105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0127105 NZ_JJMC01000142.1 Protein Homology CDS 3232 3354 . + 0 ID=cds-WP_223200913.1;Parent=gene-AB25_RS0127105;Dbxref=GenBank:WP_223200913.1;Name=WP_223200913.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004118124.1;locus_tag=AB25_RS0127105;product=Hok/Gef family protein;protein_id=WP_223200913.1;transl_table=11 NZ_JJMC01000142.1 RefSeq pseudogene 3630 3903 . - . ID=gene-AB25_RS32195;Name=AB25_RS32195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32195;partial=true;pseudo=true;start_range=.,3630 NZ_JJMC01000142.1 Protein Homology CDS 3630 3903 . - 0 ID=cds-AB25_RS32195;Parent=gene-AB25_RS32195;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052655.1;locus_tag=AB25_RS32195;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3630;transl_table=11 ##sequence-region NZ_JJMC01000143.1 1 738 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000143.1 RefSeq region 1 738 . + . ID=NZ_JJMC01000143.1:1..738;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000143.1 RefSeq gene 1 187 . - . ID=gene-AB25_RS00175;Name=AB25_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00175;old_locus_tag=AB25_5410;partial=true;start_range=.,1 NZ_JJMC01000143.1 Protein Homology CDS 1 187 . - 0 ID=cds-WP_249402589.1;Parent=gene-AB25_RS00175;Dbxref=GenBank:WP_249402589.1;Name=WP_249402589.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=AB25_RS00175;partial=true;product=ATP-binding protein;protein_id=WP_249402589.1;start_range=.,1;transl_table=11 NZ_JJMC01000143.1 RefSeq pseudogene 184 738 . - . ID=gene-AB25_RS00170;Name=AB25_RS00170;end_range=738,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS00170;old_locus_tag=AB25_5411;partial=true;pseudo=true NZ_JJMC01000143.1 Protein Homology CDS 184 738 . - 0 ID=cds-AB25_RS00170;Parent=gene-AB25_RS00170;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=738,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=AB25_RS00170;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;transl_table=11 ##sequence-region NZ_JJMC01000144.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000144.1 RefSeq region 1 2047 . + . ID=NZ_JJMC01000144.1:1..2047;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000144.1 RefSeq gene 1 680 . + . ID=gene-AB25_RS00165;Name=AB25_RS00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00165;old_locus_tag=AB25_5412;partial=true;start_range=.,1 NZ_JJMC01000144.1 Protein Homology CDS 1 680 . + 2 ID=cds-WP_032174886.1;Parent=gene-AB25_RS00165;Dbxref=GenBank:WP_032174886.1;Name=WP_032174886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418797.1;locus_tag=AB25_RS00165;partial=true;product=glycyl radical enzyme domain-containing protein;protein_id=WP_032174886.1;start_range=.,1;transl_table=11 NZ_JJMC01000144.1 RefSeq gene 652 1515 . + . ID=gene-AB25_RS00160;Name=AB25_RS00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00160;old_locus_tag=AB25_5413 NZ_JJMC01000144.1 Protein Homology CDS 652 1515 . + 0 ID=cds-WP_001088379.1-2;Parent=gene-AB25_RS00160;Dbxref=GenBank:WP_001088379.1;Name=WP_001088379.1;Ontology_term=GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418796.1;locus_tag=AB25_RS00160;product=YjjW family glycine radical enzyme activase;protein_id=WP_001088379.1;transl_table=11 NZ_JJMC01000144.1 RefSeq gene 1830 2047 . - . ID=gene-AB25_RS00155;Name=AB25_RS00155;end_range=2047,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00155;old_locus_tag=AB25_5414;partial=true NZ_JJMC01000144.1 Protein Homology CDS 1830 2047 . - 2 ID=cds-WP_032221552.1;Parent=gene-AB25_RS00155;Dbxref=GenBank:WP_032221552.1;Name=WP_032221552.1;Ontology_term=GO:0016788;end_range=2047,.;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313363.2;locus_tag=AB25_RS00155;partial=true;product=TatD family hydrolase;protein_id=WP_032221552.1;transl_table=11 ##sequence-region NZ_JJMC01000145.1 1 1277 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000145.1 RefSeq region 1 1277 . + . ID=NZ_JJMC01000145.1:1..1277;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000145.1 RefSeq gene 1 256 . - . ID=gene-AB25_RS00150;Name=AB25_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00150;old_locus_tag=AB25_5415;partial=true;start_range=.,1 NZ_JJMC01000145.1 Protein Homology CDS 1 256 . - 0 ID=cds-WP_162752926.1;Parent=gene-AB25_RS00150;Dbxref=GenBank:WP_162752926.1;Name=WP_162752926.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=AB25_RS00150;partial=true;product=helix-turn-helix domain-containing protein;protein_id=WP_162752926.1;start_range=.,1;transl_table=11 NZ_JJMC01000145.1 RefSeq gene 359 739 . + . ID=gene-AB25_RS00145;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AB25_RS00145;old_locus_tag=AB25_5416 NZ_JJMC01000145.1 Protein Homology CDS 359 739 . + 0 ID=cds-WP_001171554.1-2;Parent=gene-AB25_RS00145;Dbxref=GenBank:WP_001171554.1;Name=WP_001171554.1;gbkey=CDS;gene=tnpA;inference=COORDINATES: protein motif:HMM:NF047595.1;locus_tag=AB25_RS00145;product=IS66-like element accessory protein TnpA;protein_id=WP_001171554.1;transl_table=11 NZ_JJMC01000145.1 RefSeq pseudogene 736 990 . + . ID=gene-AB25_RS00140;Name=tnpB;end_range=990,.;gbkey=Gene;gene=tnpB;gene_biotype=pseudogene;locus_tag=AB25_RS00140;old_locus_tag=AB25_5417;partial=true;pseudo=true NZ_JJMC01000145.1 Protein Homology CDS 736 990 . + 0 ID=cds-AB25_RS00140;Parent=gene-AB25_RS00140;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=990,.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536669.1;locus_tag=AB25_RS00140;partial=true;product=IS66 family insertion sequence element accessory protein TnpB;pseudo=true;transl_table=11 NZ_JJMC01000145.1 RefSeq pseudogene 996 1277 . + . ID=gene-AB25_RS00135;Name=AB25_RS00135;end_range=1277,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS00135;old_locus_tag=AB25_5418;partial=true;pseudo=true;start_range=.,996 NZ_JJMC01000145.1 Protein Homology CDS 996 1277 . + 0 ID=cds-AB25_RS00135;Parent=gene-AB25_RS00135;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1277,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099160.1;locus_tag=AB25_RS00135;partial=true;product=IS66 family transposase;pseudo=true;start_range=.,996;transl_table=11 ##sequence-region NZ_JJMC01000146.1 1 2478 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000146.1 RefSeq region 1 2478 . + . ID=NZ_JJMC01000146.1:1..2478;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000146.1 RefSeq gene 1 597 . - . ID=gene-AB25_RS00130;Name=traE;gbkey=Gene;gene=traE;gene_biotype=protein_coding;locus_tag=AB25_RS00130;old_locus_tag=AB25_5419;partial=true;start_range=.,1 NZ_JJMC01000146.1 Protein Homology CDS 1 597 . - 0 ID=cds-WP_032171714.1-3;Parent=gene-AB25_RS00130;Dbxref=GenBank:WP_032171714.1;Name=WP_032171714.1;gbkey=CDS;gene=traE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001238927.1;locus_tag=AB25_RS00130;partial=true;product=conjugal transfer protein TraE;protein_id=WP_032171714.1;start_range=.,1;transl_table=11 NZ_JJMC01000146.1 RefSeq gene 748 1902 . - . ID=gene-AB25_RS00125;Name=AB25_RS00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00125;old_locus_tag=AB25_5420 NZ_JJMC01000146.1 Protein Homology CDS 748 1902 . - 0 ID=cds-WP_001139958.1-3;Parent=gene-AB25_RS00125;Dbxref=GenBank:WP_001139958.1;Name=WP_001139958.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396170.1;locus_tag=AB25_RS00125;product=tyrosine-type recombinase/integrase;protein_id=WP_001139958.1;transl_table=11 ##sequence-region NZ_JJMC01000147.1 1 1343 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000147.1 RefSeq region 1 1343 . + . ID=NZ_JJMC01000147.1:1..1343;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000147.1 RefSeq pseudogene 1 473 . - . ID=gene-AB25_RS00115;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=pseudogene;locus_tag=AB25_RS00115;old_locus_tag=AB25_5422;partial=true;pseudo=true;start_range=.,1 NZ_JJMC01000147.1 Protein Homology CDS 1 473 . - 0 ID=cds-AB25_RS00115;Parent=gene-AB25_RS00115;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=iscS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=AB25_RS00115;partial=true;product=cysteine desulfurase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJMC01000147.1 RefSeq gene 585 1073 . - . ID=gene-AB25_RS00110;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=AB25_RS00110;old_locus_tag=AB25_5423 NZ_JJMC01000147.1 Protein Homology CDS 585 1073 . - 0 ID=cds-WP_001241357.1-3;Parent=gene-AB25_RS00110;Dbxref=GenBank:WP_001241357.1;Name=WP_001241357.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002913993.1;locus_tag=AB25_RS00110;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_001241357.1;transl_table=11 ##sequence-region NZ_JJMC01000148.1 1 2661 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000148.1 RefSeq region 1 2661 . + . ID=NZ_JJMC01000148.1:1..2661;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000148.1 RefSeq gene 1 581 . + . ID=gene-AB25_RS00105;Name=AB25_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00105;old_locus_tag=AB25_5424;partial=true;start_range=.,1 NZ_JJMC01000148.1 Protein Homology CDS 1 581 . + 2 ID=cds-WP_032296170.1-2;Parent=gene-AB25_RS00105;Dbxref=GenBank:WP_032296170.1;Name=WP_032296170.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312927.1;locus_tag=AB25_RS00105;partial=true;product=biotin--[acetyl-CoA-carboxylase] ligase;protein_id=WP_032296170.1;start_range=.,1;transl_table=11 NZ_JJMC01000148.1 RefSeq gene 610 1560 . - . ID=gene-AB25_RS00100;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=AB25_RS00100;old_locus_tag=AB25_5425 NZ_JJMC01000148.1 Protein Homology CDS 610 1560 . - 0 ID=cds-WP_000023081.1-3;Parent=gene-AB25_RS00100;Dbxref=GenBank:WP_000023081.1;Name=WP_000023081.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418405.1;locus_tag=AB25_RS00100;product=type I pantothenate kinase;protein_id=WP_000023081.1;transl_table=11 NZ_JJMC01000148.1 RefSeq gene 1922 1997 . + . ID=gene-AB25_RS00095;Name=AB25_RS00095;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS00095;old_locus_tag=AB25_5426 NZ_JJMC01000148.1 tRNAscan-SE tRNA 1922 1997 . + . ID=rna-AB25_RS00095;Parent=gene-AB25_RS00095;anticodon=(pos:1955..1957);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS00095;product=tRNA-Thr NZ_JJMC01000148.1 tRNAscan-SE exon 1922 1997 . + . ID=exon-AB25_RS00095-1;Parent=rna-AB25_RS00095;anticodon=(pos:1955..1957);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS00095;product=tRNA-Thr NZ_JJMC01000148.1 RefSeq gene 2006 2090 . + . ID=gene-AB25_RS00090;Name=AB25_RS00090;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS00090;old_locus_tag=AB25_5427 NZ_JJMC01000148.1 tRNAscan-SE tRNA 2006 2090 . + . ID=rna-AB25_RS00090;Parent=gene-AB25_RS00090;anticodon=(pos:2040..2042);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS00090;product=tRNA-Tyr NZ_JJMC01000148.1 tRNAscan-SE exon 2006 2090 . + . ID=exon-AB25_RS00090-1;Parent=rna-AB25_RS00090;anticodon=(pos:2040..2042);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS00090;product=tRNA-Tyr NZ_JJMC01000148.1 RefSeq gene 2207 2281 . + . ID=gene-AB25_RS00085;Name=AB25_RS00085;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS00085;old_locus_tag=AB25_5428 NZ_JJMC01000148.1 tRNAscan-SE tRNA 2207 2281 . + . ID=rna-AB25_RS00085;Parent=gene-AB25_RS00085;anticodon=(pos:2240..2242);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS00085;product=tRNA-Gly NZ_JJMC01000148.1 tRNAscan-SE exon 2207 2281 . + . ID=exon-AB25_RS00085-1;Parent=rna-AB25_RS00085;anticodon=(pos:2240..2242);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS00085;product=tRNA-Gly NZ_JJMC01000148.1 RefSeq gene 2288 2363 . + . ID=gene-AB25_RS00080;Name=AB25_RS00080;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB25_RS00080;old_locus_tag=AB25_5429 NZ_JJMC01000148.1 tRNAscan-SE tRNA 2288 2363 . + . ID=rna-AB25_RS00080;Parent=gene-AB25_RS00080;anticodon=(pos:2321..2323);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS00080;product=tRNA-Thr NZ_JJMC01000148.1 tRNAscan-SE exon 2288 2363 . + . ID=exon-AB25_RS00080-1;Parent=rna-AB25_RS00080;anticodon=(pos:2321..2323);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AB25_RS00080;product=tRNA-Thr NZ_JJMC01000148.1 RefSeq gene 2478 2661 . + . ID=gene-AB25_RS27285;Name=AB25_RS27285;end_range=2661,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS27285;old_locus_tag=AB25_5430;partial=true NZ_JJMC01000148.1 Protein Homology CDS 2478 2661 . + 0 ID=cds-WP_016505062.1-2;Parent=gene-AB25_RS27285;Dbxref=GenBank:WP_016505062.1;Name=WP_016505062.1;Ontology_term=GO:0003924,GO:0005525;end_range=2661,.;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=AB25_RS27285;partial=true;product=GTP-binding protein;protein_id=WP_016505062.1;transl_table=11 ##sequence-region NZ_JJMC01000149.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000149.1 RefSeq region 1 2047 . + . ID=NZ_JJMC01000149.1:1..2047;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000149.1 RefSeq gene 80 946 . - . ID=gene-AB25_RS00075;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=protein_coding;locus_tag=AB25_RS00075;old_locus_tag=AB25_5431 NZ_JJMC01000149.1 Protein Homology CDS 80 946 . - 0 ID=cds-WP_001295515.1-2;Parent=gene-AB25_RS00075;Dbxref=GenBank:WP_001295515.1;Name=WP_001295515.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yghU;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311901.2;locus_tag=AB25_RS00075;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=WP_001295515.1;transl_table=11 NZ_JJMC01000149.1 RefSeq gene 1151 2047 . + . ID=gene-AB25_RS00070;Name=AB25_RS00070;end_range=2047,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00070;old_locus_tag=AB25_5432;partial=true NZ_JJMC01000149.1 Protein Homology CDS 1151 2047 . + 0 ID=cds-WP_032296234.1;Parent=gene-AB25_RS00070;Dbxref=GenBank:WP_032296234.1;Name=WP_032296234.1;end_range=2047,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311900.1;locus_tag=AB25_RS00070;partial=true;product=CHAP domain-containing protein;protein_id=WP_032296234.1;transl_table=11 ##sequence-region NZ_JJMC01000150.1 1 972 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000150.1 RefSeq region 1 972 . + . ID=NZ_JJMC01000150.1:1..972;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000150.1 RefSeq gene 1 539 . - . ID=gene-AB25_RS00065;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=AB25_RS00065;old_locus_tag=AB25_5433;partial=true;start_range=.,1 NZ_JJMC01000150.1 Protein Homology CDS 1 539 . - 0 ID=cds-WP_032296236.1;Parent=gene-AB25_RS00065;Dbxref=GenBank:WP_032296236.1;Name=WP_032296236.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=fimA;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418734.1;locus_tag=AB25_RS00065;partial=true;product=type 1 fimbrial major subunit FimA;protein_id=WP_032296236.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JJMC01000151.1 1 3178 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000151.1 RefSeq region 1 3178 . + . ID=NZ_JJMC01000151.1:1..3178;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000151.1 RefSeq gene 1 2595 . + . ID=gene-AB25_RS0127140;Name=AB25_RS0127140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0127140;old_locus_tag=AB25_5434;partial=true;start_range=.,1 NZ_JJMC01000151.1 Protein Homology CDS 1 2595 . + 0 ID=cds-WP_032296238.1;Parent=gene-AB25_RS0127140;Dbxref=GenBank:WP_032296238.1;Name=WP_032296238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309423.1;locus_tag=AB25_RS0127140;partial=true;product=Ag43/Cah family autotransporter adhesin;protein_id=WP_032296238.1;start_range=.,1;transl_table=11 NZ_JJMC01000151.1 RefSeq pseudogene 2666 2861 . + . ID=gene-AB25_RS00060;Name=AB25_RS00060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS00060;old_locus_tag=AB25_5435;pseudo=true NZ_JJMC01000151.1 Protein Homology CDS 2666 2861 . + 0 ID=cds-AB25_RS00060;Parent=gene-AB25_RS00060;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117568.1;locus_tag=AB25_RS00060;product=DUF905 family protein;pseudo=true;transl_table=11 NZ_JJMC01000151.1 RefSeq pseudogene 2979 3178 . + . ID=gene-AB25_RS00055;Name=AB25_RS00055;end_range=3178,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS00055;old_locus_tag=AB25_5436;partial=true;pseudo=true NZ_JJMC01000151.1 Protein Homology CDS 2979 3178 . + 0 ID=cds-AB25_RS00055;Parent=gene-AB25_RS00055;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=3178,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310828.1;locus_tag=AB25_RS00055;partial=true;product=DUF932 domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_JJMC01000152.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000152.1 RefSeq region 1 2047 . + . ID=NZ_JJMC01000152.1:1..2047;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000152.1 RefSeq gene 1 682 . + . ID=gene-AB25_RS00050;Name=fdnH;gbkey=Gene;gene=fdnH;gene_biotype=protein_coding;locus_tag=AB25_RS00050;old_locus_tag=AB25_5437;partial=true;start_range=.,1 NZ_JJMC01000152.1 Protein Homology CDS 1 682 . + 1 ID=cds-WP_000295840.1;Parent=gene-AB25_RS00050;Dbxref=GenBank:WP_000295840.1;Name=WP_000295840.1;gbkey=CDS;gene=fdnH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415992.1;locus_tag=AB25_RS00050;partial=true;product=formate dehydrogenase N subunit beta;protein_id=WP_000295840.1;start_range=.,1;transl_table=11 NZ_JJMC01000152.1 RefSeq gene 675 1328 . + . ID=gene-AB25_RS00045;Name=fdnI;gbkey=Gene;gene=fdnI;gene_biotype=protein_coding;locus_tag=AB25_RS00045;old_locus_tag=AB25_5438 NZ_JJMC01000152.1 Protein Homology CDS 675 1328 . + 0 ID=cds-WP_000045648.1-2;Parent=gene-AB25_RS00045;Dbxref=GenBank:WP_000045648.1;Name=WP_000045648.1;gbkey=CDS;gene=fdnI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310107.1;locus_tag=AB25_RS00045;product=formate dehydrogenase-N subunit gamma;protein_id=WP_000045648.1;transl_table=11 NZ_JJMC01000152.1 RefSeq gene 1735 2019 . - . ID=gene-AB25_RS00040;Name=AB25_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00040;old_locus_tag=AB25_5439 NZ_JJMC01000152.1 Protein Homology CDS 1735 2019 . - 0 ID=cds-WP_000781370.1-2;Parent=gene-AB25_RS00040;Dbxref=GenBank:WP_000781370.1;Name=WP_000781370.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415994.4;locus_tag=AB25_RS00040;product=HigA family addiction module antitoxin;protein_id=WP_000781370.1;transl_table=11 ##sequence-region NZ_JJMC01000153.1 1 840 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000153.1 RefSeq region 1 840 . + . ID=NZ_JJMC01000153.1:1..840;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000153.1 RefSeq pseudogene 1 112 . - . ID=gene-AB25_RS32645;Name=AB25_RS32645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB25_RS32645;old_locus_tag=AB25_5440;partial=true;pseudo=true;start_range=.,1 NZ_JJMC01000153.1 Protein Homology CDS 1 112 . - 0 ID=cds-AB25_RS32645;Parent=gene-AB25_RS32645;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_958725.1;locus_tag=AB25_RS32645;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JJMC01000153.1 RefSeq gene 231 770 . - . ID=gene-AB25_RS0127150;Name=AB25_RS0127150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0127150;old_locus_tag=AB25_5441 NZ_JJMC01000153.1 Protein Homology CDS 231 770 . - 0 ID=cds-WP_162752886.1;Parent=gene-AB25_RS0127150;Dbxref=GenBank:WP_162752886.1;Name=WP_162752886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001568086.1;locus_tag=AB25_RS0127150;product=TrbC family F-type conjugative pilus assembly protein;protein_id=WP_162752886.1;transl_table=11 ##sequence-region NZ_JJMC01000154.1 1 4487 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000154.1 RefSeq region 1 4487 . + . ID=NZ_JJMC01000154.1:1..4487;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000154.1 RefSeq gene 1 327 . - . ID=gene-AB25_RS00030;Name=AB25_RS00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00030;old_locus_tag=AB25_5442;partial=true;start_range=.,1 NZ_JJMC01000154.1 Protein Homology CDS 1 327 . - 0 ID=cds-WP_032296240.1;Parent=gene-AB25_RS00030;Dbxref=GenBank:WP_032296240.1;Name=WP_032296240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310828.1;locus_tag=AB25_RS00030;partial=true;product=DUF932 domain-containing protein;protein_id=WP_032296240.1;start_range=.,1;transl_table=11 NZ_JJMC01000154.1 RefSeq gene 427 660 . - . ID=gene-AB25_RS0127155;Name=AB25_RS0127155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS0127155 NZ_JJMC01000154.1 Protein Homology CDS 427 660 . - 0 ID=cds-WP_001119719.1;Parent=gene-AB25_RS0127155;Dbxref=GenBank:WP_001119719.1;Name=WP_001119719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001119724.1;locus_tag=AB25_RS0127155;product=DUF905 family protein;protein_id=WP_001119719.1;transl_table=11 NZ_JJMC01000154.1 RefSeq gene 739 1194 . - . ID=gene-AB25_RS00025;Name=AB25_RS00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00025;old_locus_tag=AB25_5444 NZ_JJMC01000154.1 Protein Homology CDS 739 1194 . - 0 ID=cds-WP_001504120.1;Parent=gene-AB25_RS00025;Dbxref=GenBank:WP_001504120.1;Name=WP_001504120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708767.1;locus_tag=AB25_RS00025;product=IrmA family protein;protein_id=WP_001504120.1;transl_table=11 NZ_JJMC01000154.1 RefSeq gene 1270 3786 . - . ID=gene-AB25_RS00020;Name=AB25_RS00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00020;old_locus_tag=AB25_5445 NZ_JJMC01000154.1 Protein Homology CDS 1270 3786 . - 0 ID=cds-WP_032173660.1;Parent=gene-AB25_RS00020;Dbxref=GenBank:WP_032173660.1;Name=WP_032173660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708766.2;locus_tag=AB25_RS00020;product=hypothetical protein;protein_id=WP_032173660.1;transl_table=11 NZ_JJMC01000154.1 RefSeq gene 3907 4487 . - . ID=gene-AB25_RS00015;Name=AB25_RS00015;end_range=4487,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00015;old_locus_tag=AB25_5446;partial=true NZ_JJMC01000154.1 Protein Homology CDS 3907 4487 . - 2 ID=cds-WP_032170654.1;Parent=gene-AB25_RS00015;Dbxref=GenBank:WP_032170654.1;Name=WP_032170654.1;end_range=4487,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309423.1;locus_tag=AB25_RS00015;partial=true;product=autotransporter domain-containing protein;protein_id=WP_032170654.1;transl_table=11 ##sequence-region NZ_JJMC01000155.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444064 NZ_JJMC01000155.1 RefSeq region 1 2047 . + . ID=NZ_JJMC01000155.1:1..2047;Dbxref=taxon:1444064;collection-date=2009-01-23;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=2-005-03_S1_C2 NZ_JJMC01000155.1 RefSeq gene 1 440 . + . ID=gene-AB25_RS00010;Name=AB25_RS00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00010;old_locus_tag=AB25_5447;partial=true;start_range=.,1 NZ_JJMC01000155.1 Protein Homology CDS 1 440 . + 2 ID=cds-WP_032171761.1-4;Parent=gene-AB25_RS00010;Dbxref=GenBank:WP_032171761.1;Name=WP_032171761.1;Ontology_term=GO:0004190,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001193550.1;locus_tag=AB25_RS00010;partial=true;product=prepilin peptidase;protein_id=WP_032171761.1;start_range=.,1;transl_table=11 NZ_JJMC01000155.1 RefSeq gene 440 1810 . + . ID=gene-AB25_RS00005;Name=AB25_RS00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB25_RS00005;old_locus_tag=AB25_5448 NZ_JJMC01000155.1 Protein Homology CDS 440 1810 . + 0 ID=cds-WP_001393542.1;Parent=gene-AB25_RS00005;Dbxref=GenBank:WP_001393542.1;Name=WP_001393542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001393542.1;locus_tag=AB25_RS00005;product=shufflon system plasmid conjugative transfer pilus tip adhesin PilV;protein_id=WP_001393542.1;transl_table=11 ###