##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build Myco_tube_TKK_03_0083_V1 #!genome-build-accession NCBI_Assembly:GCF_000651795.1 #!annotation-date 06/29/2025 09:54:40 #!annotation-source NCBI RefSeq GCF_000651795.1-RS_2025_06_29 ##sequence-region NZ_KK316784.1 1 3922361 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1448421 NZ_KK316784.1 RefSeq region 1 3922361 . + . ID=NZ_KK316784.1:1..3922361;Dbxref=taxon:1448421;collection-date=2013-04-02;country=South Africa: Durban Chest Clinic;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Homo sapiens;strain=TKK_03_0083 NZ_KK316784.1 RefSeq gene 1 1524 . + . ID=gene-AL42_RS05790;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=AL42_RS05790;old_locus_tag=AL42_00001;partial=true;start_range=.,1 NZ_KK316784.1 Protein Homology CDS 1 1524 . + 0 ID=cds-WP_374487265.1;Parent=gene-AL42_RS05790;Dbxref=GenBank:WP_374487265.1;Name=WP_374487265.1;Ontology_term=GO:0006275,GO:0003688,GO:0005524,GO:0043565;gbkey=CDS;gene=dnaA;go_function=DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214515.1;locus_tag=AL42_RS05790;partial=true;product=chromosomal replication initiator protein DnaA;protein_id=WP_374487265.1;start_range=.,1;transl_table=11 NZ_KK316784.1 RefSeq gene 1646 2907 . + . ID=gene-AL42_RS05800;Name=AL42_RS05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS05800;old_locus_tag=AL42_00003 NZ_KK316784.1 Protein Homology CDS 1646 1934 . + 0 ID=cds-WP_087902221.1;Parent=gene-AL42_RS05800;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL42_RS05800;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316784.1 Protein Homology CDS 1934 2907 . + 2 ID=cds-WP_087902221.1;Parent=gene-AL42_RS05800;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL42_RS05800;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3410 4618 . + . ID=gene-AL42_RS05805;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=AL42_RS05805;old_locus_tag=AL42_00004 NZ_KK316784.1 Protein Homology CDS 3410 4618 . + 0 ID=cds-WP_003400271.1;Parent=gene-AL42_RS05805;Dbxref=GenBank:WP_003400271.1;Name=WP_003400271.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214516.1;locus_tag=AL42_RS05805;product=DNA polymerase III subunit beta;protein_id=WP_003400271.1;transl_table=11 NZ_KK316784.1 RefSeq gene 4638 5795 . + . ID=gene-AL42_RS05810;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=AL42_RS05810;old_locus_tag=AL42_00005 NZ_KK316784.1 Protein Homology CDS 4638 5795 . + 0 ID=cds-WP_003899768.1;Parent=gene-AL42_RS05810;Dbxref=GenBank:WP_003899768.1;Name=WP_003899768.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214517.1;locus_tag=AL42_RS05810;product=DNA replication/repair protein RecF;protein_id=WP_003899768.1;transl_table=11 NZ_KK316784.1 RefSeq gene 5792 6355 . + . ID=gene-AL42_RS05815;Name=AL42_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS05815;old_locus_tag=AL42_00006 NZ_KK316784.1 Protein Homology CDS 5792 6355 . + 0 ID=cds-WP_003899769.1;Parent=gene-AL42_RS05815;Dbxref=GenBank:WP_003899769.1;Name=WP_003899769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214518.1;locus_tag=AL42_RS05815;product=DNA replication protein DciA;protein_id=WP_003899769.1;transl_table=11 NZ_KK316784.1 RefSeq gene 6598 8625 . + . ID=gene-AL42_RS05820;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=AL42_RS05820;old_locus_tag=AL42_00007 NZ_KK316784.1 Protein Homology CDS 6598 8625 . + 0 ID=cds-WP_003917863.1;Parent=gene-AL42_RS05820;Dbxref=GenBank:WP_003917863.1;Name=WP_003917863.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214519.2;locus_tag=AL42_RS05820;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_003917863.1;transl_table=11 NZ_KK316784.1 RefSeq gene 8660 11176 . + . ID=gene-AL42_RS05825;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=AL42_RS05825;old_locus_tag=AL42_00008 NZ_KK316784.1 Protein Homology CDS 8660 11176 . + 0 ID=cds-WP_003400286.1;Parent=gene-AL42_RS05825;Dbxref=GenBank:WP_003400286.1;Name=WP_003400286.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214520.1;locus_tag=AL42_RS05825;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WP_003400286.1;transl_table=11 NZ_KK316784.1 RefSeq gene 11272 12186 . + . ID=gene-AL42_RS05830;Name=AL42_RS05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS05830;old_locus_tag=AL42_00009 NZ_KK316784.1 Protein Homology CDS 11272 12186 . + 0 ID=cds-WP_003400291.1;Parent=gene-AL42_RS05830;Dbxref=GenBank:WP_003400291.1;Name=WP_003400291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214521.1;locus_tag=AL42_RS05830;product=DUF3566 domain-containing protein;protein_id=WP_003400291.1;transl_table=11 NZ_KK316784.1 RefSeq gene 12245 12318 . + . ID=gene-AL42_RS05835;Name=AL42_RS05835;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL42_RS05835;old_locus_tag=AL42_00010 NZ_KK316784.1 tRNAscan-SE tRNA 12245 12318 . + . ID=rna-AL42_RS05835;Parent=gene-AL42_RS05835;anticodon=(pos:12279..12281);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS05835;product=tRNA-Ile NZ_KK316784.1 tRNAscan-SE exon 12245 12318 . + . ID=exon-AL42_RS05835-1;Parent=rna-AL42_RS05835;anticodon=(pos:12279..12281);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS05835;product=tRNA-Ile NZ_KK316784.1 RefSeq gene 12470 12542 . + . ID=gene-AL42_RS05840;Name=AL42_RS05840;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL42_RS05840;old_locus_tag=AL42_00011 NZ_KK316784.1 tRNAscan-SE tRNA 12470 12542 . + . ID=rna-AL42_RS05840;Parent=gene-AL42_RS05840;anticodon=(pos:12503..12505);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS05840;product=tRNA-Ala NZ_KK316784.1 tRNAscan-SE exon 12470 12542 . + . ID=exon-AL42_RS05840-1;Parent=rna-AL42_RS05840;anticodon=(pos:12503..12505);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS05840;product=tRNA-Ala NZ_KK316784.1 RefSeq gene 12583 12774 . + . ID=gene-AL42_RS27370;Name=AL42_RS27370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27370 NZ_KK316784.1 Protein Homology CDS 12583 12774 . + 0 ID=cds-WP_003400294.1;Parent=gene-AL42_RS27370;Dbxref=GenBank:WP_003400294.1;Name=WP_003400294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003400294.1;locus_tag=AL42_RS27370;product=hypothetical protein;protein_id=WP_003400294.1;transl_table=11 NZ_KK316784.1 RefSeq gene 12913 13050 . - . ID=gene-AL42_RS27080;Name=AL42_RS27080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27080 NZ_KK316784.1 GeneMarkS-2+ CDS 12913 13050 . - 0 ID=cds-WP_003400297.1;Parent=gene-AL42_RS27080;Dbxref=GenBank:WP_003400297.1;Name=WP_003400297.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL42_RS27080;product=hypothetical protein;protein_id=WP_003400297.1;transl_table=11 NZ_KK316784.1 RefSeq gene 13232 13669 . - . ID=gene-AL42_RS05845;Name=cwsA;gbkey=Gene;gene=cwsA;gene_biotype=protein_coding;locus_tag=AL42_RS05845;old_locus_tag=AL42_00012 NZ_KK316784.1 Protein Homology CDS 13232 13669 . - 0 ID=cds-WP_003400307.1;Parent=gene-AL42_RS05845;Dbxref=GenBank:WP_003400307.1;Name=WP_003400307.1;gbkey=CDS;gene=cwsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003400307.1;locus_tag=AL42_RS05845;product=cell wall synthesis protein CwsA;protein_id=WP_003400307.1;transl_table=11 NZ_KK316784.1 RefSeq gene 13826 14374 . + . ID=gene-AL42_RS05850;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;locus_tag=AL42_RS05850;old_locus_tag=AL42_00013 NZ_KK316784.1 Protein Homology CDS 13826 14374 . + 0 ID=cds-WP_003400321.1;Parent=gene-AL42_RS05850;Dbxref=GenBank:WP_003400321.1;Name=WP_003400321.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003400321.1;locus_tag=AL42_RS05850;product=peptidylprolyl isomerase PpiA;protein_id=WP_003400321.1;transl_table=11 NZ_KK316784.1 RefSeq gene 14491 14916 . - . ID=gene-AL42_RS05855;Name=AL42_RS05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS05855;old_locus_tag=AL42_00014 NZ_KK316784.1 Protein Homology CDS 14491 14916 . - 0 ID=cds-WP_003899772.1;Parent=gene-AL42_RS05855;Dbxref=GenBank:WP_003899772.1;Name=WP_003899772.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214524.1;locus_tag=AL42_RS05855;product=PH domain-containing protein;protein_id=WP_003899772.1;transl_table=11 NZ_KK316784.1 RefSeq gene 15072 15353 . - . ID=gene-AL42_RS05860;Name=crgA;gbkey=Gene;gene=crgA;gene_biotype=protein_coding;locus_tag=AL42_RS05860;old_locus_tag=AL42_00015 NZ_KK316784.1 Protein Homology CDS 15072 15353 . - 0 ID=cds-WP_003400344.1;Parent=gene-AL42_RS05860;Dbxref=GenBank:WP_003400344.1;Name=WP_003400344.1;gbkey=CDS;gene=crgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214525.1;locus_tag=AL42_RS05860;product=cell division protein CrgA;protein_id=WP_003400344.1;transl_table=11 NZ_KK316784.1 RefSeq gene 15492 16235 . + . ID=gene-AL42_RS05865;Name=AL42_RS05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS05865;old_locus_tag=AL42_00016 NZ_KK316784.1 Protein Homology CDS 15492 16235 . + 0 ID=cds-WP_003917999.1;Parent=gene-AL42_RS05865;Dbxref=GenBank:WP_003917999.1;Name=WP_003917999.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008262548.1;locus_tag=AL42_RS05865;product=DUF881 domain-containing protein;protein_id=WP_003917999.1;transl_table=11 NZ_KK316784.1 RefSeq gene 16272 16970 . + . ID=gene-AL42_RS05870;Name=trpG;gbkey=Gene;gene=trpG;gene_biotype=protein_coding;locus_tag=AL42_RS05870;old_locus_tag=AL42_00017 NZ_KK316784.1 Protein Homology CDS 16272 16970 . + 0 ID=cds-WP_003400352.1;Parent=gene-AL42_RS05870;Dbxref=GenBank:WP_003400352.1;Name=WP_003400352.1;gbkey=CDS;gene=trpG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177615.1;locus_tag=AL42_RS05870;product=aminodeoxychorismate/anthranilate synthase component II;protein_id=WP_003400352.1;transl_table=11 NZ_KK316784.1 RefSeq gene 16948 18828 . - . ID=gene-AL42_RS05875;Name=pknB;gbkey=Gene;gene=pknB;gene_biotype=protein_coding;locus_tag=AL42_RS05875;old_locus_tag=AL42_00018 NZ_KK316784.1 Protein Homology CDS 16948 18828 . - 0 ID=cds-WP_003902584.1;Parent=gene-AL42_RS05875;Dbxref=GenBank:WP_003902584.1;Name=WP_003902584.1;Ontology_term=GO:0006468,GO:0004672,GO:0005524;gbkey=CDS;gene=pknB;go_function=protein kinase activity|0004672||IEA,ATP binding|0005524||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214528.1;locus_tag=AL42_RS05875;product=Stk1 family PASTA domain-containing Ser/Thr kinase;protein_id=WP_003902584.1;transl_table=11 NZ_KK316784.1 RefSeq gene 18825 20120 . - . ID=gene-AL42_RS05880;Name=pknA;gbkey=Gene;gene=pknA;gene_biotype=protein_coding;locus_tag=AL42_RS05880;old_locus_tag=AL42_00019 NZ_KK316784.1 Protein Homology CDS 18825 20120 . - 0 ID=cds-WP_003906262.1;Parent=gene-AL42_RS05880;Dbxref=GenBank:WP_003906262.1;Name=WP_003906262.1;gbkey=CDS;gene=pknA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214529.1;locus_tag=AL42_RS05880;product=serine/threonine protein kinase PknA;protein_id=WP_003906262.1;transl_table=11 NZ_KK316784.1 RefSeq gene 20117 21592 . - . ID=gene-AL42_RS05885;Name=pbpA;gbkey=Gene;gene=pbpA;gene_biotype=protein_coding;locus_tag=AL42_RS05885;old_locus_tag=AL42_00020 NZ_KK316784.1 Protein Homology CDS 20117 21592 . - 0 ID=cds-WP_003899775.1;Parent=gene-AL42_RS05885;Dbxref=GenBank:WP_003899775.1;Name=WP_003899775.1;gbkey=CDS;gene=pbpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214530.1;locus_tag=AL42_RS05885;product=D%2CD-transpeptidase PbpA;protein_id=WP_003899775.1;transl_table=11 NZ_KK316784.1 RefSeq gene 21589 22998 . - . ID=gene-AL42_RS05890;Name=rodA;gbkey=Gene;gene=rodA;gene_biotype=protein_coding;locus_tag=AL42_RS05890;old_locus_tag=AL42_00021 NZ_KK316784.1 Protein Homology CDS 21589 22998 . - 0 ID=cds-WP_003400364.1;Parent=gene-AL42_RS05890;Dbxref=GenBank:WP_003400364.1;Name=WP_003400364.1;gbkey=CDS;gene=rodA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214531.1;locus_tag=AL42_RS05890;product=cell shape-determining peptidoglycan glycosyltransferase RodA;protein_id=WP_003400364.1;transl_table=11 NZ_KK316784.1 RefSeq gene 22995 24530 . - . ID=gene-AL42_RS05895;Name=pstP;gbkey=Gene;gene=pstP;gene_biotype=protein_coding;locus_tag=AL42_RS05895;old_locus_tag=AL42_00022 NZ_KK316784.1 Protein Homology CDS 22995 24530 . - 0 ID=cds-WP_003912500.1;Parent=gene-AL42_RS05895;Dbxref=GenBank:WP_003912500.1;Name=WP_003912500.1;gbkey=CDS;gene=pstP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015385224.1;locus_tag=AL42_RS05895;product=serine/threonine phosphatase PstP;protein_id=WP_003912500.1;transl_table=11 NZ_KK316784.1 RefSeq gene 24628 25095 . - . ID=gene-AL42_RS05900;Name=fhaB;gbkey=Gene;gene=fhaB;gene_biotype=protein_coding;locus_tag=AL42_RS05900;old_locus_tag=AL42_00023 NZ_KK316784.1 Protein Homology CDS 24628 25095 . - 0 ID=cds-WP_003400373.1;Parent=gene-AL42_RS05900;Dbxref=GenBank:WP_003400373.1;Name=WP_003400373.1;gbkey=CDS;gene=fhaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214533.1;locus_tag=AL42_RS05900;product=FHA domain-containing protein FhaB/FipA;protein_id=WP_003400373.1;transl_table=11 NZ_KK316784.1 RefSeq gene 25219 26784 . - . ID=gene-AL42_RS05905;Name=fhaA;gbkey=Gene;gene=fhaA;gene_biotype=protein_coding;locus_tag=AL42_RS05905;old_locus_tag=AL42_00024 NZ_KK316784.1 Protein Homology CDS 25219 26784 . - 0 ID=cds-WP_003899777.1;Parent=gene-AL42_RS05905;Dbxref=GenBank:WP_003899777.1;Name=WP_003899777.1;gbkey=CDS;gene=fhaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214534.1;locus_tag=AL42_RS05905;product=cell division-associated protein FhaA;protein_id=WP_003899777.1;transl_table=11 NZ_KK316784.1 RefSeq gene 26984 27066 . + . ID=gene-AL42_RS05910;Name=AL42_RS05910;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL42_RS05910;old_locus_tag=AL42_00025 NZ_KK316784.1 tRNAscan-SE tRNA 26984 27066 . + . ID=rna-AL42_RS05910;Parent=gene-AL42_RS05910;anticodon=(pos:27017..27019);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS05910;product=tRNA-Leu NZ_KK316784.1 tRNAscan-SE exon 26984 27066 . + . ID=exon-AL42_RS05910-1;Parent=rna-AL42_RS05910;anticodon=(pos:27017..27019);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS05910;product=tRNA-Leu NZ_KK316784.1 RefSeq gene 27253 28221 . - . ID=gene-AL42_RS05915;Name=AL42_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS05915;old_locus_tag=AL42_00026 NZ_KK316784.1 Protein Homology CDS 27253 28221 . - 0 ID=cds-WP_003899778.1;Parent=gene-AL42_RS05915;Dbxref=GenBank:WP_003899778.1;Name=WP_003899778.1;Ontology_term=GO:0004497,GO:0010181,GO:0016703;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,FMN binding|0010181||IEA,oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)|0016703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214535.1;locus_tag=AL42_RS05915;product=NAD(P)H-dependent flavin oxidoreductase;protein_id=WP_003899778.1;transl_table=11 NZ_KK316784.1 RefSeq gene 28363 28782 . - . ID=gene-AL42_RS05920;Name=whiB5;gbkey=Gene;gene=whiB5;gene_biotype=protein_coding;locus_tag=AL42_RS05920;old_locus_tag=AL42_00027 NZ_KK316784.1 Protein Homology CDS 28363 28782 . - 0 ID=cds-WP_003400388.1;Parent=gene-AL42_RS05920;Dbxref=GenBank:WP_003400388.1;Name=WP_003400388.1;gbkey=CDS;gene=whiB5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214536.1;locus_tag=AL42_RS05920;product=transcriptional regulator WhiB5;protein_id=WP_003400388.1;transl_table=11 NZ_KK316784.1 RefSeq gene 28935 29705 . + . ID=gene-AL42_RS05925;Name=AL42_RS05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS05925;old_locus_tag=AL42_00028 NZ_KK316784.1 Protein Homology CDS 28935 29705 . + 0 ID=cds-WP_003400391.1;Parent=gene-AL42_RS05925;Dbxref=GenBank:WP_003400391.1;Name=WP_003400391.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214537.1;locus_tag=AL42_RS05925;product=helix-turn-helix domain-containing protein;protein_id=WP_003400391.1;transl_table=11 NZ_KK316784.1 RefSeq gene 29689 30546 . + . ID=gene-AL42_RS05930;Name=AL42_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS05930;old_locus_tag=AL42_00029 NZ_KK316784.1 Protein Homology CDS 29689 30546 . + 0 ID=cds-WP_003901769.1;Parent=gene-AL42_RS05930;Dbxref=GenBank:WP_003901769.1;Name=WP_003901769.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003901769.1;locus_tag=AL42_RS05930;product=C40 family peptidase;protein_id=WP_003901769.1;transl_table=11 NZ_KK316784.1 RefSeq gene 30584 30946 . + . ID=gene-AL42_RS05935;Name=AL42_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS05935;old_locus_tag=AL42_00030 NZ_KK316784.1 Protein Homology CDS 30584 30946 . + 0 ID=cds-WP_003400395.1;Parent=gene-AL42_RS05935;Dbxref=GenBank:WP_003400395.1;Name=WP_003400395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214539.1;locus_tag=AL42_RS05935;product=DUF4226 domain-containing protein;protein_id=WP_003400395.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 31079 32490 . + . ID=gene-AL42_RS05940;Name=AL42_RS05940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS05940;old_locus_tag=AL42_00031;pseudo=true NZ_KK316784.1 Protein Homology CDS 31079 32490 . + 0 ID=cds-AL42_RS05940;Parent=gene-AL42_RS05940;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015302351.1;locus_tag=AL42_RS05940;product=DUF4226 domain-containing protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 32528 32845 . + . ID=gene-AL42_RS05945;Name=AL42_RS05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS05945;old_locus_tag=AL42_00032 NZ_KK316784.1 Protein Homology CDS 32528 32845 . + 0 ID=cds-WP_003400401.1;Parent=gene-AL42_RS05945;Dbxref=GenBank:WP_003400401.1;Name=WP_003400401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214541.1;locus_tag=AL42_RS05945;product=ESX-1 secretion-associated protein;protein_id=WP_003400401.1;transl_table=11 NZ_KK316784.1 RefSeq gene 32853 33158 . + . ID=gene-AL42_RS05950;Name=AL42_RS05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS05950;old_locus_tag=AL42_00033 NZ_KK316784.1 Protein Homology CDS 32853 33158 . + 0 ID=cds-WP_003400405.1;Parent=gene-AL42_RS05950;Dbxref=GenBank:WP_003400405.1;Name=WP_003400405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214542.1;locus_tag=AL42_RS05950;product=DUF2694 domain-containing protein;protein_id=WP_003400405.1;transl_table=11 NZ_KK316784.1 RefSeq gene 33163 33306 . - . ID=gene-AL42_RS27085;Name=AL42_RS27085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27085 NZ_KK316784.1 Protein Homology CDS 33163 33306 . - 0 ID=cds-WP_003400408.1;Parent=gene-AL42_RS27085;Dbxref=GenBank:WP_003400408.1;Name=WP_003400408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003400408.1;locus_tag=AL42_RS27085;product=hypothetical protein;protein_id=WP_003400408.1;transl_table=11 NZ_KK316784.1 RefSeq gene 33396 34493 . + . ID=gene-AL42_RS05955;Name=AL42_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS05955;old_locus_tag=AL42_00034 NZ_KK316784.1 Protein Homology CDS 33396 34493 . + 0 ID=cds-WP_003400411.1;Parent=gene-AL42_RS05955;Dbxref=GenBank:WP_003400411.1;Name=WP_003400411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214543.1;locus_tag=AL42_RS05955;product=DUF5631 domain-containing protein;protein_id=WP_003400411.1;transl_table=11 NZ_KK316784.1 RefSeq gene 34563 34892 . + . ID=gene-AL42_RS05960;Name=AL42_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS05960;old_locus_tag=AL42_00035 NZ_KK316784.1 Protein Homology CDS 34563 34892 . + 0 ID=cds-WP_003400413.1;Parent=gene-AL42_RS05960;Dbxref=GenBank:WP_003400413.1;Name=WP_003400413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214544.1;locus_tag=AL42_RS05960;product=DUF2710 domain-containing protein;protein_id=WP_003400413.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 34906 35031 . + . ID=gene-AL42_RS28055;Name=AL42_RS28055;end_range=35031,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS28055;partial=true;pseudo=true;start_range=.,34906 NZ_KK316784.1 Protein Homology CDS 34906 35031 . + 0 ID=cds-AL42_RS28055;Parent=gene-AL42_RS28055;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=35031,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015630641.1;locus_tag=AL42_RS28055;partial=true;product=hypothetical protein;pseudo=true;start_range=.,34906;transl_table=11 NZ_KK316784.1 RefSeq gene 35634 37949 . + . ID=gene-AL42_RS05970;Name=AL42_RS05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS05970;old_locus_tag=AL42_00037 NZ_KK316784.1 Protein Homology CDS 35634 37949 . + 0 ID=cds-WP_003901773.1;Parent=gene-AL42_RS05970;Dbxref=GenBank:WP_003901773.1;Name=WP_003901773.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214546.1;locus_tag=AL42_RS05970;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_003901773.1;transl_table=11 NZ_KK316784.1 RefSeq gene 37946 38209 . + . ID=gene-AL42_RS05975;Name=acpA;gbkey=Gene;gene=acpA;gene_biotype=protein_coding;locus_tag=AL42_RS05975;old_locus_tag=AL42_00038 NZ_KK316784.1 Protein Homology CDS 37946 38209 . + 0 ID=cds-WP_003400418.1;Parent=gene-AL42_RS05975;Dbxref=GenBank:WP_003400418.1;Name=WP_003400418.1;Ontology_term=GO:0006633,GO:0009245,GO:0000035,GO:0000036;gbkey=CDS;gene=acpA;go_function=acyl binding|0000035||IEA,acyl carrier activity|0000036||IEA;go_process=fatty acid biosynthetic process|0006633||IEA,lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214547.1;locus_tag=AL42_RS05975;product=acyl carrier protein;protein_id=WP_003400418.1;transl_table=11 NZ_KK316784.1 RefSeq gene 38206 38601 . + . ID=gene-AL42_RS05980;Name=AL42_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS05980;old_locus_tag=AL42_00039 NZ_KK316784.1 Protein Homology CDS 38206 38601 . + 0 ID=cds-WP_003400421.1;Parent=gene-AL42_RS05980;Dbxref=GenBank:WP_003400421.1;Name=WP_003400421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214548.1;locus_tag=AL42_RS05980;product=nuclear transport factor 2 family protein;protein_id=WP_003400421.1;transl_table=11 NZ_KK316784.1 RefSeq gene 38598 40286 . + . ID=gene-AL42_RS05985;Name=fadD34;gbkey=Gene;gene=fadD34;gene_biotype=protein_coding;locus_tag=AL42_RS05985;old_locus_tag=AL42_00040 NZ_KK316784.1 Protein Homology CDS 38598 40286 . + 0 ID=cds-WP_003906265.1;Parent=gene-AL42_RS05985;Dbxref=GenBank:WP_003906265.1;Name=WP_003906265.1;gbkey=CDS;gene=fadD34;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177686.1;locus_tag=AL42_RS05985;product=fatty acyl-AMP ligase FadD34;protein_id=WP_003906265.1;transl_table=11 NZ_KK316784.1 RefSeq gene 40451 41224 . - . ID=gene-AL42_RS05990;Name=AL42_RS05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS05990;old_locus_tag=AL42_00041 NZ_KK316784.1 Protein Homology CDS 40451 41224 . - 0 ID=cds-WP_003400427.1;Parent=gene-AL42_RS05990;Dbxref=GenBank:WP_003400427.1;Name=WP_003400427.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214550.1;locus_tag=AL42_RS05990;product=TIGR03084 family metal-binding protein;protein_id=WP_003400427.1;transl_table=11 NZ_KK316784.1 RefSeq gene 41272 42597 . - . ID=gene-AL42_RS05995;Name=AL42_RS05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS05995;old_locus_tag=AL42_00042 NZ_KK316784.1 Protein Homology CDS 41272 42597 . - 0 ID=cds-WP_003400431.1;Parent=gene-AL42_RS05995;Dbxref=GenBank:WP_003400431.1;Name=WP_003400431.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214551.1;locus_tag=AL42_RS05995;product=MFS transporter;protein_id=WP_003400431.1;transl_table=11 NZ_KK316784.1 RefSeq gene 42699 43307 . + . ID=gene-AL42_RS06000;Name=AL42_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06000;old_locus_tag=AL42_00043 NZ_KK316784.1 Protein Homology CDS 42699 43307 . + 0 ID=cds-WP_003400460.1;Parent=gene-AL42_RS06000;Dbxref=GenBank:WP_003400460.1;Name=WP_003400460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214552.1;locus_tag=AL42_RS06000;product=YqgE/AlgH family protein;protein_id=WP_003400460.1;transl_table=11 NZ_KK316784.1 RefSeq gene 43399 43746 . - . ID=gene-AL42_RS06005;Name=AL42_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06005;old_locus_tag=AL42_00044 NZ_KK316784.1 Protein Homology CDS 43399 43746 . - 0 ID=cds-WP_003400465.1;Parent=gene-AL42_RS06005;Dbxref=GenBank:WP_003400465.1;Name=WP_003400465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214553.1;locus_tag=AL42_RS06005;product=membrane protein;protein_id=WP_003400465.1;transl_table=11 NZ_KK316784.1 RefSeq gene 43828 44760 . - . ID=gene-AL42_RS06010;Name=AL42_RS06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06010;old_locus_tag=AL42_00045 NZ_KK316784.1 Protein Homology CDS 43828 44760 . - 0 ID=cds-WP_003900793.1;Parent=gene-AL42_RS06010;Dbxref=GenBank:WP_003900793.1;Name=WP_003900793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214554.2;locus_tag=AL42_RS06010;product=LpqN/LpqT family lipoprotein;protein_id=WP_003900793.1;transl_table=11 NZ_KK316784.1 RefSeq gene 44957 47866 . + . ID=gene-AL42_RS06015;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=AL42_RS06015;old_locus_tag=AL42_00046 NZ_KK316784.1 Protein Homology CDS 44957 47866 . + 0 ID=cds-WP_031721774.1;Parent=gene-AL42_RS06015;Dbxref=GenBank:WP_031721774.1;Name=WP_031721774.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214555.1;locus_tag=AL42_RS06015;product=leucine--tRNA ligase;protein_id=WP_031721774.1;transl_table=11 NZ_KK316784.1 RefSeq gene 47976 48479 . - . ID=gene-AL42_RS06020;Name=AL42_RS06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06020;old_locus_tag=AL42_00047 NZ_KK316784.1 Protein Homology CDS 47976 48479 . - 0 ID=cds-WP_003912416.1;Parent=gene-AL42_RS06020;Dbxref=GenBank:WP_003912416.1;Name=WP_003912416.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007771688.1;locus_tag=AL42_RS06020;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_003912416.1;transl_table=11 NZ_KK316784.1 RefSeq gene 48761 49495 . - . ID=gene-AL42_RS06025;Name=AL42_RS06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06025;old_locus_tag=AL42_00048 NZ_KK316784.1 Protein Homology CDS 48761 49495 . - 0 ID=cds-WP_003899786.1;Parent=gene-AL42_RS06025;Dbxref=GenBank:WP_003899786.1;Name=WP_003899786.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214557.1;locus_tag=AL42_RS06025;product=GntR family transcriptional regulator;protein_id=WP_003899786.1;transl_table=11 NZ_KK316784.1 RefSeq gene 49628 50422 . - . ID=gene-AL42_RS06030;Name=AL42_RS06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06030;old_locus_tag=AL42_00049 NZ_KK316784.1 Protein Homology CDS 49628 50422 . - 0 ID=cds-WP_003400486.1;Parent=gene-AL42_RS06030;Dbxref=GenBank:WP_003400486.1;Name=WP_003400486.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214558.1;locus_tag=AL42_RS06030;product=LLM class F420-dependent oxidoreductase;protein_id=WP_003400486.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 50438 51332 . - . ID=gene-AL42_RS0104100;Name=AL42_RS0104100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS0104100;old_locus_tag=AL42_00050;pseudo=true NZ_KK316784.1 Protein Homology CDS 50438 51332 . - 0 ID=cds-AL42_RS0104100;Parent=gene-AL42_RS0104100;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214559.1;locus_tag=AL42_RS0104100;product=alpha/beta fold hydrolase;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 51414 52517 . - . ID=gene-AL42_RS06035;Name=AL42_RS06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06035;old_locus_tag=AL42_00051 NZ_KK316784.1 Protein Homology CDS 51414 52517 . - 0 ID=cds-WP_003400492.1;Parent=gene-AL42_RS06035;Dbxref=GenBank:WP_003400492.1;Name=WP_003400492.1;Ontology_term=GO:0006021,GO:0008654,GO:0004512;gbkey=CDS;go_function=inositol-3-phosphate synthase activity|0004512||IEA;go_process=inositol biosynthetic process|0006021||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214560.1;locus_tag=AL42_RS06035;product=inositol-3-phosphate synthase;protein_id=WP_003400492.1;transl_table=11 NZ_KK316784.1 RefSeq gene 52578 53120 . - . ID=gene-AL42_RS06040;Name=AL42_RS06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06040;old_locus_tag=AL42_00052 NZ_KK316784.1 Protein Homology CDS 52578 53120 . - 0 ID=cds-WP_003899787.1;Parent=gene-AL42_RS06040;Dbxref=GenBank:WP_003899787.1;Name=WP_003899787.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214561.1;locus_tag=AL42_RS06040;product=PadR family transcriptional regulator;protein_id=WP_003899787.1;transl_table=11 NZ_KK316784.1 RefSeq gene 53221 54090 . - . ID=gene-AL42_RS06045;Name=AL42_RS06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06045;old_locus_tag=AL42_00053 NZ_KK316784.1 Protein Homology CDS 53221 54090 . - 0 ID=cds-WP_003400498.1;Parent=gene-AL42_RS06045;Dbxref=GenBank:WP_003400498.1;Name=WP_003400498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214562.1;locus_tag=AL42_RS06045;product=DUF1707 SHOCT-like domain-containing protein;protein_id=WP_003400498.1;transl_table=11 NZ_KK316784.1 RefSeq gene 54203 54637 . + . ID=gene-AL42_RS06050;Name=AL42_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06050;old_locus_tag=AL42_00054 NZ_KK316784.1 Protein Homology CDS 54203 54637 . + 0 ID=cds-WP_003899789.1;Parent=gene-AL42_RS06050;Dbxref=GenBank:WP_003899789.1;Name=WP_003899789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012392073.1;locus_tag=AL42_RS06050;product=DUF5318 family protein;protein_id=WP_003899789.1;transl_table=11 NZ_KK316784.1 RefSeq gene 54630 57101 . + . ID=gene-AL42_RS06055;Name=ponA1;gbkey=Gene;gene=ponA1;gene_biotype=protein_coding;locus_tag=AL42_RS06055;old_locus_tag=AL42_00055 NZ_KK316784.1 Protein Homology CDS 54630 57101 . + 0 ID=cds-WP_003907269.1;Parent=gene-AL42_RS06055;Dbxref=GenBank:WP_003907269.1;Name=WP_003907269.1;gbkey=CDS;gene=ponA1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899790.1;locus_tag=AL42_RS06055;product=transglycosylase/D%2CD-transpeptidase PonA1;protein_id=WP_003907269.1;transl_table=11 NZ_KK316784.1 RefSeq gene 57098 58780 . + . ID=gene-AL42_RS06060;Name=AL42_RS06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06060;old_locus_tag=AL42_00056 NZ_KK316784.1 Protein Homology CDS 57098 58780 . + 0 ID=cds-WP_003400514.1;Parent=gene-AL42_RS06060;Dbxref=GenBank:WP_003400514.1;Name=WP_003400514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214565.1;locus_tag=AL42_RS06060;product=glycosyltransferase family 87 protein;protein_id=WP_003400514.1;transl_table=11 NZ_KK316784.1 RefSeq gene 58737 59375 . + . ID=gene-AL42_RS06065;Name=AL42_RS06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06065;old_locus_tag=AL42_00057 NZ_KK316784.1 Protein Homology CDS 58737 59375 . + 0 ID=cds-WP_003912418.1;Parent=gene-AL42_RS06065;Dbxref=GenBank:WP_003912418.1;Name=WP_003912418.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912418.1;locus_tag=AL42_RS06065;product=DJ-1/PfpI family protein;protein_id=WP_003912418.1;transl_table=11 NZ_KK316784.1 RefSeq gene 59594 59884 . + . ID=gene-AL42_RS06070;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=AL42_RS06070;old_locus_tag=AL42_00058 NZ_KK316784.1 Protein Homology CDS 59594 59884 . + 0 ID=cds-WP_003400520.1;Parent=gene-AL42_RS06070;Dbxref=GenBank:WP_003400520.1;Name=WP_003400520.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214567.1;locus_tag=AL42_RS06070;product=30S ribosomal protein S6;protein_id=WP_003400520.1;transl_table=11 NZ_KK316784.1 RefSeq gene 59988 60482 . + . ID=gene-AL42_RS06075;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=AL42_RS06075;old_locus_tag=AL42_00059 NZ_KK316784.1 Protein Homology CDS 59988 60482 . + 0 ID=cds-WP_003400534.1;Parent=gene-AL42_RS06075;Dbxref=GenBank:WP_003400534.1;Name=WP_003400534.1;gbkey=CDS;gene=ssb;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214568.1;locus_tag=AL42_RS06075;product=single-stranded DNA-binding protein;protein_id=WP_003400534.1;transl_table=11 NZ_KK316784.1 RefSeq gene 60524 60778 . + . ID=gene-AL42_RS06080;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=AL42_RS06080;old_locus_tag=AL42_00060 NZ_KK316784.1 Protein Homology CDS 60524 60778 . + 0 ID=cds-WP_003400540.1;Parent=gene-AL42_RS06080;Dbxref=GenBank:WP_003400540.1;Name=WP_003400540.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003874730.1;locus_tag=AL42_RS06080;product=30S ribosomal protein S18;protein_id=WP_003400540.1;transl_table=11 NZ_KK316784.1 RefSeq gene 60811 61269 . + . ID=gene-AL42_RS06085;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=AL42_RS06085;old_locus_tag=AL42_00061 NZ_KK316784.1 Protein Homology CDS 60811 61269 . + 0 ID=cds-WP_003400543.1;Parent=gene-AL42_RS06085;Dbxref=GenBank:WP_003400543.1;Name=WP_003400543.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214570.1;locus_tag=AL42_RS06085;product=50S ribosomal protein L9;protein_id=WP_003400543.1;transl_table=11 NZ_KK316784.1 RefSeq gene 61798 64422 . + . ID=gene-AL42_RS06095;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=AL42_RS06095;old_locus_tag=AL42_00063 NZ_KK316784.1 Protein Homology CDS 61798 64422 . + 0 ID=cds-WP_003400547.1;Parent=gene-AL42_RS06095;Dbxref=GenBank:WP_003400547.1;Name=WP_003400547.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214572.1;locus_tag=AL42_RS06095;product=replicative DNA helicase;protein_id=WP_003400547.1;transl_table=11 NZ_KK316784.1 RefSeq gene 64602 65294 . + . ID=gene-AL42_RS06100;Name=darT;gbkey=Gene;gene=darT;gene_biotype=protein_coding;locus_tag=AL42_RS06100;old_locus_tag=AL42_00064 NZ_KK316784.1 Protein Homology CDS 64602 65294 . + 0 ID=cds-WP_003400548.1;Parent=gene-AL42_RS06100;Dbxref=GenBank:WP_003400548.1;Name=WP_003400548.1;gbkey=CDS;gene=darT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214573.1;locus_tag=AL42_RS06100;product=toxin-antitoxin system toxin DarT;protein_id=WP_003400548.1;transl_table=11 NZ_KK316784.1 RefSeq gene 65311 66369 . + . ID=gene-AL42_RS06105;Name=darG;gbkey=Gene;gene=darG;gene_biotype=protein_coding;locus_tag=AL42_RS06105;old_locus_tag=AL42_00065 NZ_KK316784.1 Protein Homology CDS 65311 66369 . + 0 ID=cds-WP_003400551.1;Parent=gene-AL42_RS06105;Dbxref=GenBank:WP_003400551.1;Name=WP_003400551.1;gbkey=CDS;gene=darG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214574.1;locus_tag=AL42_RS06105;product=toxin-antitoxin system antitoxin DNA ADP-ribosyl glycohydrolase DarG;protein_id=WP_003400551.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 66414 66752 . - . ID=gene-AL42_RS25380;Name=AL42_RS25380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS25380;pseudo=true NZ_KK316784.1 Protein Homology CDS 66414 66752 . - 0 ID=cds-AL42_RS25380;Parent=gene-AL42_RS25380;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007408697.1;locus_tag=AL42_RS25380;product=hypothetical protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 66954 68096 . + . ID=gene-AL42_RS06110;Name=AL42_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06110;old_locus_tag=AL42_00067 NZ_KK316784.1 Protein Homology CDS 66954 68096 . + 0 ID=cds-WP_003400562.1;Parent=gene-AL42_RS06110;Dbxref=GenBank:WP_003400562.1;Name=WP_003400562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177689.1;locus_tag=AL42_RS06110;product=glycoside hydrolase family 6 protein;protein_id=WP_003400562.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 68325 69765 . + . ID=gene-AL42_RS0104115;Name=AL42_RS0104115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS0104115;old_locus_tag=AL42_00068;pseudo=true NZ_KK316784.1 Protein Homology CDS 68325 69765 . + 0 ID=cds-AL42_RS0104115;Parent=gene-AL42_RS0104115;Note=frameshifted;Ontology_term=GO:0050660;gbkey=CDS;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214577.1;locus_tag=AL42_RS0104115;product=FAD-binding protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 69821 69982 . + . ID=gene-AL42_RS25385;Name=AL42_RS25385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS25385 NZ_KK316784.1 Protein Homology CDS 69821 69982 . + 0 ID=cds-WP_003899796.1;Parent=gene-AL42_RS25385;Dbxref=GenBank:WP_003899796.1;Name=WP_003899796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030026.1;locus_tag=AL42_RS25385;product=hypothetical protein;protein_id=WP_003899796.1;transl_table=11 NZ_KK316784.1 RefSeq gene 70023 72962 . + . ID=gene-AL42_RS06115;Name=AL42_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06115;old_locus_tag=AL42_00069 NZ_KK316784.1 Protein Homology CDS 70023 72962 . + 0 ID=cds-WP_003901785.1;Parent=gene-AL42_RS06115;Dbxref=GenBank:WP_003901785.1;Name=WP_003901785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214578.1;locus_tag=AL42_RS06115;product=UPF0182 family protein;protein_id=WP_003901785.1;transl_table=11 NZ_KK316784.1 RefSeq gene 73029 73268 . + . ID=gene-AL42_RS06120;Name=AL42_RS06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06120;old_locus_tag=AL42_00070 NZ_KK316784.1 Protein Homology CDS 73029 73268 . + 0 ID=cds-WP_003400577.1;Parent=gene-AL42_RS06120;Dbxref=GenBank:WP_003400577.1;Name=WP_003400577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007408701.1;locus_tag=AL42_RS06120;product=FitA-like ribbon-helix-helix domain-containing protein;protein_id=WP_003400577.1;transl_table=11 NZ_KK316784.1 RefSeq gene 73261 73662 . + . ID=gene-AL42_RS06125;Name=vapC1;gbkey=Gene;gene=vapC1;gene_biotype=protein_coding;locus_tag=AL42_RS06125;old_locus_tag=AL42_00071 NZ_KK316784.1 Protein Homology CDS 73261 73662 . + 0 ID=cds-WP_003400580.1;Parent=gene-AL42_RS06125;Dbxref=GenBank:WP_003400580.1;Name=WP_003400580.1;gbkey=CDS;gene=vapC1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214579.1;locus_tag=AL42_RS06125;product=type II toxin-antitoxin system ribonuclease VapC1;protein_id=WP_003400580.1;transl_table=11 NZ_KK316784.1 RefSeq gene 73714 75951 . - . ID=gene-AL42_RS06130;Name=AL42_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06130;old_locus_tag=AL42_00072 NZ_KK316784.1 Protein Homology CDS 73714 75951 . - 0 ID=cds-WP_003899797.1;Parent=gene-AL42_RS06130;Dbxref=GenBank:WP_003899797.1;Name=WP_003899797.1;Ontology_term=GO:0006099,GO:0004450;gbkey=CDS;go_function=isocitrate dehydrogenase (NADP+) activity|0004450||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214580.1;locus_tag=AL42_RS06130;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_003899797.1;transl_table=11 NZ_KK316784.1 RefSeq gene 76069 76638 . - . ID=gene-AL42_RS06135;Name=AL42_RS06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06135;old_locus_tag=AL42_00073 NZ_KK316784.1 Protein Homology CDS 76069 76638 . - 0 ID=cds-WP_003400591.1;Parent=gene-AL42_RS06135;Dbxref=GenBank:WP_003400591.1;Name=WP_003400591.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214581.1;locus_tag=AL42_RS06135;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003400591.1;transl_table=11 NZ_KK316784.1 RefSeq gene 76741 77652 . + . ID=gene-AL42_RS06140;Name=AL42_RS06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06140;old_locus_tag=AL42_00074 NZ_KK316784.1 Protein Homology CDS 76741 77652 . + 0 ID=cds-WP_003899798.1;Parent=gene-AL42_RS06140;Dbxref=GenBank:WP_003899798.1;Name=WP_003899798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214582.1;locus_tag=AL42_RS06140;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_003899798.1;transl_table=11 NZ_KK316784.1 RefSeq gene 77677 79062 . - . ID=gene-AL42_RS06145;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=AL42_RS06145;old_locus_tag=AL42_00075 NZ_KK316784.1 Protein Homology CDS 77677 79062 . - 0 ID=cds-WP_003400600.1;Parent=gene-AL42_RS06145;Dbxref=GenBank:WP_003400600.1;Name=WP_003400600.1;Ontology_term=GO:0006094,GO:0003941;gbkey=CDS;gene=sdaA;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214583.1;locus_tag=AL42_RS06145;product=L-serine ammonia-lyase;protein_id=WP_003400600.1;transl_table=11 NZ_KK316784.1 RefSeq gene 79059 80336 . - . ID=gene-AL42_RS06150;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=AL42_RS06150;old_locus_tag=AL42_00076 NZ_KK316784.1 Protein Homology CDS 79059 80336 . - 0 ID=cds-WP_003899799.1;Parent=gene-AL42_RS06150;Dbxref=GenBank:WP_003899799.1;Name=WP_003899799.1;Ontology_term=GO:0019264,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214584.1;locus_tag=AL42_RS06150;product=serine hydroxymethyltransferase;protein_id=WP_003899799.1;transl_table=11 NZ_KK316784.1 cmsearch riboswitch 80644 80734 . - . ID=id-NZ_KK316784.1:80644..80734;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_KK316784.1 RefSeq gene 81187 82236 . + . ID=gene-AL42_RS06155;Name=AL42_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06155;old_locus_tag=AL42_00078 NZ_KK316784.1 Protein Homology CDS 81187 82236 . + 0 ID=cds-WP_003902593.1;Parent=gene-AL42_RS06155;Dbxref=GenBank:WP_003902593.1;Name=WP_003902593.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003902593.1;locus_tag=AL42_RS06155;product=amidohydrolase family protein;protein_id=WP_003902593.1;transl_table=11 NZ_KK316784.1 RefSeq gene 82249 83421 . + . ID=gene-AL42_RS06160;Name=AL42_RS06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06160;old_locus_tag=AL42_00079 NZ_KK316784.1 Protein Homology CDS 82249 83421 . + 0 ID=cds-WP_003400622.1;Parent=gene-AL42_RS06160;Dbxref=GenBank:WP_003400622.1;Name=WP_003400622.1;Ontology_term=GO:0009086,GO:0030170,GO:0047804;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214589.1;locus_tag=AL42_RS06160;product=MalY/PatB family protein;protein_id=WP_003400622.1;transl_table=11 NZ_KK316784.1 RefSeq gene 83436 83816 . - . ID=gene-AL42_RS06165;Name=AL42_RS06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06165;old_locus_tag=AL42_00080 NZ_KK316784.1 Protein Homology CDS 83436 83816 . - 0 ID=cds-WP_003913085.1;Parent=gene-AL42_RS06165;Dbxref=GenBank:WP_003913085.1;Name=WP_003913085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003913085.1;locus_tag=AL42_RS06165;product=hypothetical protein;protein_id=WP_003913085.1;transl_table=11 NZ_KK316784.1 RefSeq gene 83889 84719 . - . ID=gene-AL42_RS06170;Name=AL42_RS06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06170;old_locus_tag=AL42_00081 NZ_KK316784.1 Protein Homology CDS 83889 84719 . - 0 ID=cds-WP_003900801.1;Parent=gene-AL42_RS06170;Dbxref=GenBank:WP_003900801.1;Name=WP_003900801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214591.1;locus_tag=AL42_RS06170;product=alpha/beta fold hydrolase;protein_id=WP_003900801.1;transl_table=11 NZ_KK316784.1 RefSeq gene 84781 85386 . + . ID=gene-AL42_RS06175;Name=AL42_RS06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06175;old_locus_tag=AL42_00082 NZ_KK316784.1 Protein Homology CDS 84781 85386 . + 0 ID=cds-WP_003899803.1;Parent=gene-AL42_RS06175;Dbxref=GenBank:WP_003899803.1;Name=WP_003899803.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214592.1;locus_tag=AL42_RS06175;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003899803.1;transl_table=11 NZ_KK316784.1 RefSeq gene 85461 86054 . - . ID=gene-AL42_RS06180;Name=AL42_RS06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06180;old_locus_tag=AL42_00083 NZ_KK316784.1 Protein Homology CDS 85461 86054 . - 0 ID=cds-WP_003901788.1;Parent=gene-AL42_RS06180;Dbxref=GenBank:WP_003901788.1;Name=WP_003901788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177616.1;locus_tag=AL42_RS06180;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;protein_id=WP_003901788.1;transl_table=11 NZ_KK316784.1 RefSeq gene 86051 86257 . - . ID=gene-AL42_RS06185;Name=AL42_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06185;old_locus_tag=AL42_00084 NZ_KK316784.1 Protein Homology CDS 86051 86257 . - 0 ID=cds-WP_003400649.1;Parent=gene-AL42_RS06185;Dbxref=GenBank:WP_003400649.1;Name=WP_003400649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007408717.1;locus_tag=AL42_RS06185;product=hypothetical protein;protein_id=WP_003400649.1;transl_table=11 NZ_KK316784.1 RefSeq gene 86457 87278 . + . ID=gene-AL42_RS06190;Name=AL42_RS06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06190;old_locus_tag=AL42_00085 NZ_KK316784.1 Protein Homology CDS 86457 87278 . + 0 ID=cds-WP_003400655.1;Parent=gene-AL42_RS06190;Dbxref=GenBank:WP_003400655.1;Name=WP_003400655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214593.1;locus_tag=AL42_RS06190;product=dormancy-associated translation inhibitor;protein_id=WP_003400655.1;transl_table=11 NZ_KK316784.1 RefSeq gene 87275 87733 . + . ID=gene-AL42_RS06195;Name=AL42_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06195;old_locus_tag=AL42_00086 NZ_KK316784.1 Protein Homology CDS 87275 87733 . + 0 ID=cds-WP_003899804.1;Parent=gene-AL42_RS06195;Dbxref=GenBank:WP_003899804.1;Name=WP_003899804.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214594.1;locus_tag=AL42_RS06195;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_003899804.1;transl_table=11 NZ_KK316784.1 RefSeq gene 87828 88172 . + . ID=gene-AL42_RS06200;Name=AL42_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06200;old_locus_tag=AL42_00087 NZ_KK316784.1 Protein Homology CDS 87828 88172 . + 0 ID=cds-WP_003400657.1;Parent=gene-AL42_RS06200;Dbxref=GenBank:WP_003400657.1;Name=WP_003400657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214595.1;locus_tag=AL42_RS06200;product=lsr2/espR transcriptional regulator;protein_id=WP_003400657.1;transl_table=11 NZ_KK316784.1 RefSeq gene 88177 88656 . + . ID=gene-AL42_RS06205;Name=AL42_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06205;old_locus_tag=AL42_00088 NZ_KK316784.1 Protein Homology CDS 88177 88656 . + 0 ID=cds-WP_003400658.1;Parent=gene-AL42_RS06205;Dbxref=GenBank:WP_003400658.1;Name=WP_003400658.1;Ontology_term=GO:0022900,GO:0008137,GO:0048038,GO:1990204;gbkey=CDS;go_component=oxidoreductase complex|1990204||IEA;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,quinone binding|0048038||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214596.2;locus_tag=AL42_RS06205;product=NADH-quinone oxidoreductase subunit B family protein;protein_id=WP_003400658.1;transl_table=11 NZ_KK316784.1 RefSeq gene 88653 90575 . + . ID=gene-AL42_RS06210;Name=AL42_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06210;old_locus_tag=AL42_00089 NZ_KK316784.1 Protein Homology CDS 88653 90575 . + 0 ID=cds-WP_003907280.1;Parent=gene-AL42_RS06210;Dbxref=GenBank:WP_003907280.1;Name=WP_003907280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214597.1;locus_tag=AL42_RS06210;product=oxidoreductase;protein_id=WP_003907280.1;transl_table=11 NZ_KK316784.1 RefSeq gene 90581 91531 . + . ID=gene-AL42_RS06215;Name=hycD;gbkey=Gene;gene=hycD;gene_biotype=protein_coding;locus_tag=AL42_RS06215;old_locus_tag=AL42_00090 NZ_KK316784.1 Protein Homology CDS 90581 91531 . + 0 ID=cds-WP_003900802.1;Parent=gene-AL42_RS06215;Dbxref=GenBank:WP_003900802.1;Name=WP_003900802.1;Ontology_term=GO:0022900,GO:0016491,GO:1990204;gbkey=CDS;gene=hycD;go_component=oxidoreductase complex|1990204||IEA;go_function=oxidoreductase activity|0016491||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214598.1;locus_tag=AL42_RS06215;product=respiratory chain complex I subunit 1 family protein;protein_id=WP_003900802.1;transl_table=11 NZ_KK316784.1 RefSeq gene 91542 92204 . + . ID=gene-AL42_RS06220;Name=AL42_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06220;old_locus_tag=AL42_00091 NZ_KK316784.1 Protein Homology CDS 91542 92204 . + 0 ID=cds-WP_003400661.1;Parent=gene-AL42_RS06220;Dbxref=GenBank:WP_003400661.1;Name=WP_003400661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214599.1;locus_tag=AL42_RS06220;product=hydrogenase HycP;protein_id=WP_003400661.1;transl_table=11 NZ_KK316784.1 RefSeq gene 92204 93670 . + . ID=gene-AL42_RS06225;Name=hycQ;gbkey=Gene;gene=hycQ;gene_biotype=protein_coding;locus_tag=AL42_RS06225;old_locus_tag=AL42_00092 NZ_KK316784.1 Protein Homology CDS 92204 93670 . + 0 ID=cds-WP_003400662.1;Parent=gene-AL42_RS06225;Dbxref=GenBank:WP_003400662.1;Name=WP_003400662.1;gbkey=CDS;gene=hycQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214600.1;locus_tag=AL42_RS06225;product=hydrogenase HycQ;protein_id=WP_003400662.1;transl_table=11 NZ_KK316784.1 RefSeq gene 93667 95145 . + . ID=gene-AL42_RS06230;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=AL42_RS06230;old_locus_tag=AL42_00093 NZ_KK316784.1 Protein Homology CDS 93667 95145 . + 0 ID=cds-WP_003400663.1;Parent=gene-AL42_RS06230;Dbxref=GenBank:WP_003400663.1;Name=WP_003400663.1;Ontology_term=GO:0008137;gbkey=CDS;gene=hycE;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214601.1;locus_tag=AL42_RS06230;product=hydrogenase large subunit;protein_id=WP_003400663.1;transl_table=11 NZ_KK316784.1 RefSeq gene 95375 95854 . + . ID=gene-AL42_RS0104130;Name=AL42_RS0104130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0104130;old_locus_tag=AL42_00094 NZ_KK316784.1 Protein Homology CDS 95375 95854 . + 0 ID=cds-WP_003899806.1;Parent=gene-AL42_RS0104130;Dbxref=GenBank:WP_003899806.1;Name=WP_003899806.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899806.1;locus_tag=AL42_RS0104130;product=SRPBCC family protein;protein_id=WP_003899806.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 95999 96604 . + . ID=gene-AL42_RS06235;Name=AL42_RS06235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS06235;old_locus_tag=AL42_00095;partial=true;pseudo=true;start_range=.,95999 NZ_KK316784.1 Protein Homology CDS 95999 96604 . + 0 ID=cds-AL42_RS06235;Parent=gene-AL42_RS06235;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019970694.1;locus_tag=AL42_RS06235;partial=true;product=class I SAM-dependent methyltransferase;pseudo=true;start_range=.,95999;transl_table=11 NZ_KK316784.1 RefSeq gene 96733 97494 . + . ID=gene-AL42_RS06240;Name=AL42_RS06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06240;old_locus_tag=AL42_00096 NZ_KK316784.1 Protein Homology CDS 96733 97494 . + 0 ID=cds-WP_003901796.1;Parent=gene-AL42_RS06240;Dbxref=GenBank:WP_003901796.1;Name=WP_003901796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214604.1;locus_tag=AL42_RS06240;product=DUF2127 domain-containing protein;protein_id=WP_003901796.1;transl_table=11 NZ_KK316784.1 RefSeq gene 97928 98695 . + . ID=gene-AL42_RS06245;Name=mtn;gbkey=Gene;gene=mtn;gene_biotype=protein_coding;locus_tag=AL42_RS06245;old_locus_tag=AL42_00097 NZ_KK316784.1 Protein Homology CDS 97928 98695 . + 0 ID=cds-WP_003400678.1;Parent=gene-AL42_RS06245;Dbxref=GenBank:WP_003400678.1;Name=WP_003400678.1;Ontology_term=GO:0009116,GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtn;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside metabolic process|0009116||IEA,nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214605.1;locus_tag=AL42_RS06245;product=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;protein_id=WP_003400678.1;transl_table=11 NZ_KK316784.1 RefSeq gene 98827 101112 . + . ID=gene-AL42_RS06250;Name=ctpA;gbkey=Gene;gene=ctpA;gene_biotype=protein_coding;locus_tag=AL42_RS06250;old_locus_tag=AL42_00098 NZ_KK316784.1 Protein Homology CDS 98827 101112 . + 0 ID=cds-WP_003899808.1;Parent=gene-AL42_RS06250;Dbxref=GenBank:WP_003899808.1;Name=WP_003899808.1;Ontology_term=GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;gene=ctpA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214606.1;locus_tag=AL42_RS06250;product=heavy metal translocating P-type ATPase;protein_id=WP_003899808.1;transl_table=11 NZ_KK316784.1 RefSeq gene 101059 101769 . - . ID=gene-AL42_RS06255;Name=AL42_RS06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06255;old_locus_tag=AL42_00099 NZ_KK316784.1 Protein Homology CDS 101059 101769 . - 0 ID=cds-WP_003912510.1;Parent=gene-AL42_RS06255;Dbxref=GenBank:WP_003912510.1;Name=WP_003912510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015302401.1;locus_tag=AL42_RS06255;product=zf-HC2 domain-containing protein;protein_id=WP_003912510.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 101954 103349 . - . ID=gene-AL42_RS06260;Name=AL42_RS06260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS06260;old_locus_tag=AL42_00100;pseudo=true NZ_KK316784.1 Protein Homology CDS 101954 103349 . - 0 ID=cds-AL42_RS06260;Parent=gene-AL42_RS06260;Note=frameshifted;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014001758.1;locus_tag=AL42_RS06260;product=HNH endonuclease signature motif containing protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 103572 104963 . + . ID=gene-AL42_RS06265;Name=AL42_RS06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06265;old_locus_tag=AL42_00102 NZ_KK316784.1 Protein Homology CDS 103572 104963 . + 0 ID=cds-WP_003901799.1;Parent=gene-AL42_RS06265;Dbxref=GenBank:WP_003901799.1;Name=WP_003901799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177690.1;locus_tag=AL42_RS06265;product=PPE family protein;protein_id=WP_003901799.1;transl_table=11 NZ_KK316784.1 RefSeq gene 104982 105851 . + . ID=gene-AL42_RS06270;Name=scoE;gbkey=Gene;gene=scoE;gene_biotype=protein_coding;locus_tag=AL42_RS06270;old_locus_tag=AL42_00103 NZ_KK316784.1 Protein Homology CDS 104982 105851 . + 0 ID=cds-WP_003400786.1;Parent=gene-AL42_RS06270;Dbxref=GenBank:WP_003400786.1;Name=WP_003400786.1;Ontology_term=GO:0046872,GO:0051213;gbkey=CDS;gene=scoE;go_function=metal ion binding|0046872||IEA,dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214611.1;locus_tag=AL42_RS06270;product=(3R)-3-[(carboxymethyl)amino]fatty acid oxygenase/decarboxylase;protein_id=WP_003400786.1;transl_table=11 NZ_KK316784.1 RefSeq gene 105848 106399 . + . ID=gene-AL42_RS06275;Name=fcoT;gbkey=Gene;gene=fcoT;gene_biotype=protein_coding;locus_tag=AL42_RS06275;old_locus_tag=AL42_00104 NZ_KK316784.1 Protein Homology CDS 105848 106399 . + 0 ID=cds-WP_003899810.1;Parent=gene-AL42_RS06275;Dbxref=GenBank:WP_003899810.1;Name=WP_003899810.1;gbkey=CDS;gene=fcoT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214612.1;locus_tag=AL42_RS06275;product=fatty acyl CoA thioesterase FcoT;protein_id=WP_003899810.1;transl_table=11 NZ_KK316784.1 RefSeq gene 106428 108026 . + . ID=gene-AL42_RS06280;Name=fadD10;gbkey=Gene;gene=fadD10;gene_biotype=protein_coding;locus_tag=AL42_RS06280;old_locus_tag=AL42_00105 NZ_KK316784.1 Protein Homology CDS 106428 108026 . + 0 ID=cds-WP_003916215.1;Parent=gene-AL42_RS06280;Dbxref=GenBank:WP_003916215.1;Name=WP_003916215.1;gbkey=CDS;gene=fadD10;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003916215.1;locus_tag=AL42_RS06280;product=fatty acid--CoA ligase FadD10;protein_id=WP_003916215.1;transl_table=11 NZ_KK316784.1 RefSeq gene 108031 108267 . + . ID=gene-AL42_RS06285;Name=AL42_RS06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06285;old_locus_tag=AL42_00106 NZ_KK316784.1 Protein Homology CDS 108031 108267 . + 0 ID=cds-WP_003400793.1;Parent=gene-AL42_RS06285;Dbxref=GenBank:WP_003400793.1;Name=WP_003400793.1;Ontology_term=GO:0006633,GO:0000035,GO:0000036;gbkey=CDS;go_function=acyl binding|0000035||IEA,acyl carrier activity|0000036||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214614.1;locus_tag=AL42_RS06285;product=acyl carrier protein;protein_id=WP_003400793.1;transl_table=11 NZ_KK316784.1 RefSeq gene 108249 115787 . + . ID=gene-AL42_RS06290;Name=nrp;gbkey=Gene;gene=nrp;gene_biotype=protein_coding;locus_tag=AL42_RS06290;old_locus_tag=AL42_00107 NZ_KK316784.1 Protein Homology CDS 108249 115787 . + 0 ID=cds-WP_003400794.1;Parent=gene-AL42_RS06290;Dbxref=GenBank:WP_003400794.1;Name=WP_003400794.1;Ontology_term=GO:1904091;gbkey=CDS;gene=nrp;go_function=non-ribosomal peptide synthetase activity|1904091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214615.1;locus_tag=AL42_RS06290;product=non-ribosomal peptide synthetase Nrp;protein_id=WP_003400794.1;transl_table=11 NZ_KK316784.1 RefSeq gene 115962 117947 . + . ID=gene-AL42_RS06295;Name=AL42_RS06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06295;old_locus_tag=AL42_00108 NZ_KK316784.1 Protein Homology CDS 115962 117947 . + 0 ID=cds-WP_003900808.1;Parent=gene-AL42_RS06295;Dbxref=GenBank:WP_003900808.1;Name=WP_003900808.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214616.1;locus_tag=AL42_RS06295;product=cytochrome c oxidase assembly protein;protein_id=WP_003900808.1;transl_table=11 NZ_KK316784.1 RefSeq gene 118163 120421 . - . ID=gene-AL42_RS06300;Name=ctpB;gbkey=Gene;gene=ctpB;gene_biotype=protein_coding;locus_tag=AL42_RS06300;old_locus_tag=AL42_00109 NZ_KK316784.1 Protein Homology CDS 118163 120421 . - 0 ID=cds-WP_003400797.1;Parent=gene-AL42_RS06300;Dbxref=GenBank:WP_003400797.1;Name=WP_003400797.1;Ontology_term=GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;gene=ctpB;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214617.1;locus_tag=AL42_RS06300;product=heavy metal translocating P-type ATPase;protein_id=WP_003400797.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 120565 122079 . + . ID=gene-AL42_RS06305;Name=AL42_RS06305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS06305;old_locus_tag=AL42_00110;pseudo=true NZ_KK316784.1 Protein Homology CDS 120565 122079 . + 0 ID=cds-AL42_RS06305;Parent=gene-AL42_RS06305;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214618.1;locus_tag=AL42_RS06305;product=cyclic nucleotide-binding domain-containing protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 122113 122218 . - . ID=gene-AL42_RS26745;Name=AL42_RS26745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS26745;partial=true;pseudo=true;start_range=.,122113 NZ_KK316784.1 Protein Homology CDS 122113 122218 . - 0 ID=cds-AL42_RS26745;Parent=gene-AL42_RS26745;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005063154.1;locus_tag=AL42_RS26745;partial=true;product=50S ribosomal protein L33;pseudo=true;start_range=.,122113;transl_table=11 NZ_KK316784.1 RefSeq gene 122228 122512 . - . ID=gene-AL42_RS06310;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=AL42_RS06310;old_locus_tag=AL42_00111 NZ_KK316784.1 Protein Homology CDS 122228 122512 . - 0 ID=cds-WP_003400802.1;Parent=gene-AL42_RS06310;Dbxref=GenBank:WP_003400802.1;Name=WP_003400802.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177691.1;locus_tag=AL42_RS06310;product=50S ribosomal protein L28;protein_id=WP_003400802.1;transl_table=11 NZ_KK316784.1 RefSeq gene 122622 123818 . + . ID=gene-AL42_RS06315;Name=mrf;gbkey=Gene;gene=mrf;gene_biotype=protein_coding;locus_tag=AL42_RS06315;old_locus_tag=AL42_00112 NZ_KK316784.1 Protein Homology CDS 122622 123818 . + 0 ID=cds-WP_003400804.1;Parent=gene-AL42_RS06315;Dbxref=GenBank:WP_003400804.1;Name=WP_003400804.1;gbkey=CDS;gene=mrf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214620.1;locus_tag=AL42_RS06315;product=ribosome hibernation factor-recruiting GTPase MRF;protein_id=WP_003400804.1;transl_table=11 NZ_KK316784.1 RefSeq gene 123913 128790 . - . ID=gene-AL42_RS06320;Name=ctpI;gbkey=Gene;gene=ctpI;gene_biotype=protein_coding;locus_tag=AL42_RS06320;old_locus_tag=AL42_00113 NZ_KK316784.1 Protein Homology CDS 123913 128790 . - 0 ID=cds-WP_031721775.1;Parent=gene-AL42_RS06320;Dbxref=GenBank:WP_031721775.1;Name=WP_031721775.1;Ontology_term=GO:0005215,GO:0005524,GO:0016887,GO:0016020;gbkey=CDS;gene=ctpI;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003400807.1;locus_tag=AL42_RS06320;product=cation-translocating P-type ATPase;protein_id=WP_031721775.1;transl_table=11 NZ_KK316784.1 RefSeq gene 129144 129377 . - . ID=gene-AL42_RS06325;Name=AL42_RS06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06325;old_locus_tag=AL42_00114 NZ_KK316784.1 Protein Homology CDS 129144 129377 . - 0 ID=cds-WP_003899816.1;Parent=gene-AL42_RS06325;Dbxref=GenBank:WP_003899816.1;Name=WP_003899816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015354093.1;locus_tag=AL42_RS06325;product=hypothetical protein;protein_id=WP_003899816.1;transl_table=11 NZ_KK316784.1 RefSeq gene 129632 131122 . + . ID=gene-AL42_RS06330;Name=AL42_RS06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06330;old_locus_tag=AL42_00115 NZ_KK316784.1 Protein Homology CDS 129632 131122 . + 0 ID=cds-WP_003909149.1;Parent=gene-AL42_RS06330;Dbxref=GenBank:WP_003909149.1;Name=WP_003909149.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177692.1;locus_tag=AL42_RS06330;product=PE family protein;protein_id=WP_003909149.1;transl_table=11 NZ_KK316784.1 RefSeq gene 131165 132019 . + . ID=gene-AL42_RS06335;Name=AL42_RS06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06335;old_locus_tag=AL42_00116 NZ_KK316784.1 Protein Homology CDS 131165 132019 . + 0 ID=cds-WP_003899818.1;Parent=gene-AL42_RS06335;Dbxref=GenBank:WP_003899818.1;Name=WP_003899818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899818.1;locus_tag=AL42_RS06335;product=rhomboid family intramembrane serine protease;protein_id=WP_003899818.1;transl_table=11 NZ_KK316784.1 RefSeq gene 132200 134257 . + . ID=gene-AL42_RS06340;Name=AL42_RS06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06340;old_locus_tag=AL42_00117 NZ_KK316784.1 Protein Homology CDS 132200 134257 . + 0 ID=cds-WP_003900811.1;Parent=gene-AL42_RS06340;Dbxref=GenBank:WP_003900811.1;Name=WP_003900811.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214625.1;locus_tag=AL42_RS06340;product=acyltransferase family protein;protein_id=WP_003900811.1;transl_table=11 NZ_KK316784.1 RefSeq gene 134539 135495 . + . ID=gene-AL42_RS06345;Name=gca;gbkey=Gene;gene=gca;gene_biotype=protein_coding;locus_tag=AL42_RS06345;old_locus_tag=AL42_00118 NZ_KK316784.1 Protein Homology CDS 134539 135495 . + 0 ID=cds-WP_003400829.1;Parent=gene-AL42_RS06345;Dbxref=GenBank:WP_003400829.1;Name=WP_003400829.1;gbkey=CDS;gene=gca;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214626.1;locus_tag=AL42_RS06345;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_003400829.1;transl_table=11 NZ_KK316784.1 RefSeq gene 135569 136159 . + . ID=gene-AL42_RS06350;Name=gmhA;gbkey=Gene;gene=gmhA;gene_biotype=protein_coding;locus_tag=AL42_RS06350;old_locus_tag=AL42_00119 NZ_KK316784.1 Protein Homology CDS 135569 136159 . + 0 ID=cds-WP_003400839.1;Parent=gene-AL42_RS06350;Dbxref=GenBank:WP_003400839.1;Name=WP_003400839.1;gbkey=CDS;gene=gmhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214627.1;locus_tag=AL42_RS06350;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_003400839.1;transl_table=11 NZ_KK316784.1 RefSeq gene 136191 136763 . + . ID=gene-AL42_RS06355;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=AL42_RS06355;old_locus_tag=AL42_00120 NZ_KK316784.1 Protein Homology CDS 136191 136763 . + 0 ID=cds-WP_003400840.1;Parent=gene-AL42_RS06355;Dbxref=GenBank:WP_003400840.1;Name=WP_003400840.1;gbkey=CDS;gene=gmhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214628.1;locus_tag=AL42_RS06355;product=D-glycero-alpha-D-manno-heptose-1%2C7-bisphosphate 7-phosphatase;protein_id=WP_003400840.1;transl_table=11 NZ_KK316784.1 RefSeq gene 136763 137923 . + . ID=gene-AL42_RS06360;Name=hddA;gbkey=Gene;gene=hddA;gene_biotype=protein_coding;locus_tag=AL42_RS06360;old_locus_tag=AL42_00121 NZ_KK316784.1 Protein Homology CDS 136763 137923 . + 0 ID=cds-WP_003902603.1;Parent=gene-AL42_RS06360;Dbxref=GenBank:WP_003902603.1;Name=WP_003902603.1;Ontology_term=GO:0005524;gbkey=CDS;gene=hddA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214629.1;locus_tag=AL42_RS06360;product=GHMP family kinase ATP-binding protein;protein_id=WP_003902603.1;transl_table=11 NZ_KK316784.1 RefSeq gene 138206 138394 . + . ID=gene-AL42_RS0104145;Name=AL42_RS0104145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0104145 NZ_KK316784.1 Protein Homology CDS 138206 138394 . + 0 ID=cds-WP_003400850.1;Parent=gene-AL42_RS0104145;Dbxref=GenBank:WP_003400850.1;Name=WP_003400850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030027.1;locus_tag=AL42_RS0104145;product=hypothetical protein;protein_id=WP_003400850.1;transl_table=11 NZ_KK316784.1 RefSeq gene 138517 139272 . - . ID=gene-AL42_RS06365;Name=ldtMt1;gbkey=Gene;gene=ldtMt1;gene_biotype=protein_coding;locus_tag=AL42_RS06365;old_locus_tag=AL42_00122 NZ_KK316784.1 Protein Homology CDS 138517 139272 . - 0 ID=cds-WP_003400856.1;Parent=gene-AL42_RS06365;Dbxref=GenBank:WP_003400856.1;Name=WP_003400856.1;gbkey=CDS;gene=ldtMt1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214630.1;locus_tag=AL42_RS06365;product=L%2CD-transpeptidase LdtMt1;protein_id=WP_003400856.1;transl_table=11 NZ_KK316784.1 RefSeq gene 139450 140394 . + . ID=gene-AL42_RS06370;Name=oxyS;gbkey=Gene;gene=oxyS;gene_biotype=protein_coding;locus_tag=AL42_RS06370;old_locus_tag=AL42_00123 NZ_KK316784.1 Protein Homology CDS 139450 140394 . + 0 ID=cds-WP_003906284.1;Parent=gene-AL42_RS06370;Dbxref=GenBank:WP_003906284.1;Name=WP_003906284.1;gbkey=CDS;gene=oxyS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214631.1;locus_tag=AL42_RS06370;product=LysR family transcriptional regulator OxyS;protein_id=WP_003906284.1;transl_table=11 NZ_KK316784.1 RefSeq gene 140378 142126 . - . ID=gene-AL42_RS06375;Name=oxc;gbkey=Gene;gene=oxc;gene_biotype=protein_coding;locus_tag=AL42_RS06375;old_locus_tag=AL42_00124 NZ_KK316784.1 Protein Homology CDS 140378 142126 . - 0 ID=cds-WP_003400858.1;Parent=gene-AL42_RS06375;Dbxref=GenBank:WP_003400858.1;Name=WP_003400858.1;Ontology_term=GO:0033611,GO:0000287,GO:0008949,GO:0030976;gbkey=CDS;gene=oxc;go_function=magnesium ion binding|0000287||IEA,oxalyl-CoA decarboxylase activity|0008949||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=oxalate catabolic process|0033611||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214632.1;locus_tag=AL42_RS06375;product=oxalyl-CoA decarboxylase;protein_id=WP_003400858.1;transl_table=11 NZ_KK316784.1 RefSeq gene 142299 143876 . + . ID=gene-AL42_RS06380;Name=AL42_RS06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06380;old_locus_tag=AL42_00125 NZ_KK316784.1 Protein Homology CDS 142299 143876 . + 0 ID=cds-WP_003901806.1;Parent=gene-AL42_RS06380;Dbxref=GenBank:WP_003901806.1;Name=WP_003901806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214633.1;locus_tag=AL42_RS06380;product=FadD7 family fatty acid--CoA ligase;protein_id=WP_003901806.1;transl_table=11 NZ_KK316784.1 RefSeq gene 143877 146021 . - . ID=gene-AL42_RS06385;Name=AL42_RS06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06385;old_locus_tag=AL42_00126 NZ_KK316784.1 Protein Homology CDS 143877 146021 . - 0 ID=cds-WP_003901807.1;Parent=gene-AL42_RS06385;Dbxref=GenBank:WP_003901807.1;Name=WP_003901807.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214634.1;locus_tag=AL42_RS06385;product=elongation factor G-like protein EF-G2;protein_id=WP_003901807.1;transl_table=11 NZ_KK316784.1 RefSeq gene 146158 146592 . - . ID=gene-AL42_RS06390;Name=AL42_RS06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06390;old_locus_tag=AL42_00127 NZ_KK316784.1 Protein Homology CDS 146158 146592 . - 0 ID=cds-WP_003400864.1;Parent=gene-AL42_RS06390;Dbxref=GenBank:WP_003400864.1;Name=WP_003400864.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214635.1;locus_tag=AL42_RS06390;product=TIGR03668 family PPOX class F420-dependent oxidoreductase;protein_id=WP_003400864.1;transl_table=11 NZ_KK316784.1 RefSeq gene 146741 147109 . + . ID=gene-AL42_RS06395;Name=AL42_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06395;old_locus_tag=AL42_00128 NZ_KK316784.1 Protein Homology CDS 146741 147109 . + 0 ID=cds-WP_003400865.1;Parent=gene-AL42_RS06395;Dbxref=GenBank:WP_003400865.1;Name=WP_003400865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214636.1;locus_tag=AL42_RS06395;product=hypothetical protein;protein_id=WP_003400865.1;transl_table=11 NZ_KK316784.1 RefSeq gene 147106 147474 . + . ID=gene-AL42_RS06400;Name=AL42_RS06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06400;old_locus_tag=AL42_00129 NZ_KK316784.1 Protein Homology CDS 147106 147474 . + 0 ID=cds-WP_003400878.1;Parent=gene-AL42_RS06400;Dbxref=GenBank:WP_003400878.1;Name=WP_003400878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214637.1;locus_tag=AL42_RS06400;product=hypothetical protein;protein_id=WP_003400878.1;transl_table=11 NZ_KK316784.1 RefSeq gene 147783 149408 . + . ID=gene-AL42_RS06405;Name=AL42_RS06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06405;old_locus_tag=AL42_00130 NZ_KK316784.1 Protein Homology CDS 147783 149408 . + 0 ID=cds-WP_009939628.1;Parent=gene-AL42_RS06405;Dbxref=GenBank:WP_009939628.1;Name=WP_009939628.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015288800.1;locus_tag=AL42_RS06405;product=PE family protein;protein_id=WP_009939628.1;transl_table=11 NZ_KK316784.1 RefSeq gene 149560 150627 . + . ID=gene-AL42_RS06410;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=AL42_RS06410;old_locus_tag=AL42_00131 NZ_KK316784.1 Protein Homology CDS 149560 150627 . + 0 ID=cds-WP_003400885.1;Parent=gene-AL42_RS06410;Dbxref=GenBank:WP_003400885.1;Name=WP_003400885.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;gene=pepA;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214639.1;locus_tag=AL42_RS06410;product=S1C family serine protease;protein_id=WP_003400885.1;transl_table=11 NZ_KK316784.1 RefSeq gene 150736 152541 . + . ID=gene-AL42_RS06415;Name=treS;gbkey=Gene;gene=treS;gene_biotype=protein_coding;locus_tag=AL42_RS06415;old_locus_tag=AL42_00132 NZ_KK316784.1 Protein Homology CDS 150736 152541 . + 0 ID=cds-WP_003400893.1;Parent=gene-AL42_RS06415;Dbxref=GenBank:WP_003400893.1;Name=WP_003400893.1;Ontology_term=GO:0005991,GO:0047471;gbkey=CDS;gene=treS;go_function=maltose alpha-D-glucosyltransferase activity|0047471||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214640.1;locus_tag=AL42_RS06415;product=maltose alpha-D-glucosyltransferase;protein_id=WP_003400893.1;transl_table=11 NZ_KK316784.1 RefSeq gene 152591 153958 . + . ID=gene-AL42_RS06420;Name=mak;gbkey=Gene;gene=mak;gene_biotype=protein_coding;locus_tag=AL42_RS06420;old_locus_tag=AL42_00133 NZ_KK316784.1 Protein Homology CDS 152591 153958 . + 0 ID=cds-WP_003899824.1;Parent=gene-AL42_RS06420;Dbxref=GenBank:WP_003899824.1;Name=WP_003899824.1;gbkey=CDS;gene=mak;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214641.1;locus_tag=AL42_RS06420;product=maltokinase;protein_id=WP_003899824.1;transl_table=11 NZ_KK316784.1 RefSeq gene 154026 154805 . + . ID=gene-AL42_RS06425;Name=AL42_RS06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06425;old_locus_tag=AL42_00134 NZ_KK316784.1 Protein Homology CDS 154026 154805 . + 0 ID=cds-WP_003899825.1;Parent=gene-AL42_RS06425;Dbxref=GenBank:WP_003899825.1;Name=WP_003899825.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214642.1;locus_tag=AL42_RS06425;product=YoaK family protein;protein_id=WP_003899825.1;transl_table=11 NZ_KK316784.1 RefSeq gene 154937 155959 . - . ID=gene-AL42_RS06430;Name=ag85C;gbkey=Gene;gene=ag85C;gene_biotype=protein_coding;gene_synonym=fbpC;locus_tag=AL42_RS06430;old_locus_tag=AL42_00135 NZ_KK316784.1 Protein Homology CDS 154937 155959 . - 0 ID=cds-WP_003400908.1;Parent=gene-AL42_RS06430;Dbxref=GenBank:WP_003400908.1;Name=WP_003400908.1;gbkey=CDS;gene=ag85C;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177694.1;locus_tag=AL42_RS06430;product=diacylglycerol acyltransferase/mycolyltransferase Ag85C;protein_id=WP_003400908.1;transl_table=11 NZ_KK316784.1 RefSeq gene 156206 156661 . + . ID=gene-AL42_RS06435;Name=htdZ;gbkey=Gene;gene=htdZ;gene_biotype=protein_coding;locus_tag=AL42_RS06435;old_locus_tag=AL42_00136 NZ_KK316784.1 Protein Homology CDS 156206 156661 . + 0 ID=cds-WP_031721776.1;Parent=gene-AL42_RS06435;Dbxref=GenBank:WP_031721776.1;Name=WP_031721776.1;gbkey=CDS;gene=htdZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214644.1;locus_tag=AL42_RS06435;product=3-hydroxyacyl-thioester dehydratase HtdZ;protein_id=WP_031721776.1;transl_table=11 NZ_KK316784.1 RefSeq gene 156674 158017 . - . ID=gene-AL42_RS06440;Name=AL42_RS06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06440;old_locus_tag=AL42_00137 NZ_KK316784.1 Protein Homology CDS 156674 158017 . - 0 ID=cds-WP_003400917.1;Parent=gene-AL42_RS06440;Dbxref=GenBank:WP_003400917.1;Name=WP_003400917.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020731414.1;locus_tag=AL42_RS06440;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003400917.1;transl_table=11 NZ_KK316784.1 RefSeq gene 158059 159141 . - . ID=gene-AL42_RS06445;Name=AL42_RS06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06445;old_locus_tag=AL42_00138 NZ_KK316784.1 Protein Homology CDS 158059 159141 . - 0 ID=cds-WP_003899826.1;Parent=gene-AL42_RS06445;Dbxref=GenBank:WP_003899826.1;Name=WP_003899826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214646.1;locus_tag=AL42_RS06445;product=F420-dependent hydroxymycolic acid dehydrogenase;protein_id=WP_003899826.1;transl_table=11 NZ_KK316784.1 RefSeq gene 159228 159833 . + . ID=gene-AL42_RS06450;Name=AL42_RS06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06450;old_locus_tag=AL42_00139 NZ_KK316784.1 Protein Homology CDS 159228 159833 . + 0 ID=cds-WP_003400924.1;Parent=gene-AL42_RS06450;Dbxref=GenBank:WP_003400924.1;Name=WP_003400924.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214647.1;locus_tag=AL42_RS06450;product=GNAT family N-acetyltransferase;protein_id=WP_003400924.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 160130 161031 . + . ID=gene-AL42_RS0104150;Name=ephF;gbkey=Gene;gene=ephF;gene_biotype=pseudogene;locus_tag=AL42_RS0104150;pseudo=true NZ_KK316784.1 Protein Homology CDS 160130 161031 . + 0 ID=cds-AL42_RS0104150;Parent=gene-AL42_RS0104150;Note=frameshifted;gbkey=CDS;gene=ephF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214648.1;locus_tag=AL42_RS0104150;product=alpha/beta fold hydrolase;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 161002 161607 . - . ID=gene-AL42_RS06455;Name=AL42_RS06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06455;old_locus_tag=AL42_00141 NZ_KK316784.1 Protein Homology CDS 161002 161607 . - 0 ID=cds-WP_003400935.1;Parent=gene-AL42_RS06455;Dbxref=GenBank:WP_003400935.1;Name=WP_003400935.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214649.1;locus_tag=AL42_RS06455;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003400935.1;transl_table=11 NZ_KK316784.1 RefSeq gene 161724 163049 . + . ID=gene-AL42_RS06460;Name=AL42_RS06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06460;old_locus_tag=AL42_00142 NZ_KK316784.1 Protein Homology CDS 161724 163049 . + 0 ID=cds-WP_003906289.1;Parent=gene-AL42_RS06460;Dbxref=GenBank:WP_003906289.1;Name=WP_003906289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214650.1;locus_tag=AL42_RS06460;product=cytochrome P450;protein_id=WP_003906289.1;transl_table=11 NZ_KK316784.1 RefSeq gene 163070 163618 . - . ID=gene-AL42_RS06465;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=AL42_RS06465;old_locus_tag=AL42_00143 NZ_KK316784.1 Protein Homology CDS 163070 163618 . - 0 ID=cds-WP_003400942.1;Parent=gene-AL42_RS06465;Dbxref=GenBank:WP_003400942.1;Name=WP_003400942.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214651.1;locus_tag=AL42_RS06465;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_003400942.1;transl_table=11 NZ_KK316784.1 RefSeq gene 163681 164184 . + . ID=gene-AL42_RS06470;Name=AL42_RS06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06470;old_locus_tag=AL42_00144 NZ_KK316784.1 Protein Homology CDS 163681 164184 . + 0 ID=cds-WP_003400945.1;Parent=gene-AL42_RS06470;Dbxref=GenBank:WP_003400945.1;Name=WP_003400945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214652.1;locus_tag=AL42_RS06470;product=nuclear transport factor 2 family protein;protein_id=WP_003400945.1;transl_table=11 NZ_KK316784.1 RefSeq gene 164185 165207 . + . ID=gene-AL42_RS06475;Name=AL42_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06475;old_locus_tag=AL42_00145 NZ_KK316784.1 Protein Homology CDS 164185 165207 . + 0 ID=cds-WP_003400947.1;Parent=gene-AL42_RS06475;Dbxref=GenBank:WP_003400947.1;Name=WP_003400947.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214653.1;locus_tag=AL42_RS06475;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_003400947.1;transl_table=11 NZ_KK316784.1 RefSeq gene 165268 165648 . + . ID=gene-AL42_RS06480;Name=AL42_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06480;old_locus_tag=AL42_00146 NZ_KK316784.1 Protein Homology CDS 165268 165648 . + 0 ID=cds-WP_003400949.1;Parent=gene-AL42_RS06480;Dbxref=GenBank:WP_003400949.1;Name=WP_003400949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214654.1;locus_tag=AL42_RS06480;product=DUF427 domain-containing protein;protein_id=WP_003400949.1;transl_table=11 NZ_KK316784.1 RefSeq gene 165629 166039 . - . ID=gene-AL42_RS06485;Name=AL42_RS06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06485;old_locus_tag=AL42_00147 NZ_KK316784.1 Protein Homology CDS 165629 166039 . - 0 ID=cds-WP_003400951.1;Parent=gene-AL42_RS06485;Dbxref=GenBank:WP_003400951.1;Name=WP_003400951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214655.1;locus_tag=AL42_RS06485;product=nuclear transport factor 2 family protein;protein_id=WP_003400951.1;transl_table=11 NZ_KK316784.1 RefSeq gene 166069 166995 . + . ID=gene-AL42_RS06490;Name=AL42_RS06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06490;old_locus_tag=AL42_00148 NZ_KK316784.1 Protein Homology CDS 166069 166995 . + 0 ID=cds-WP_003400956.1;Parent=gene-AL42_RS06490;Dbxref=GenBank:WP_003400956.1;Name=WP_003400956.1;Ontology_term=GO:0006281,GO:0019104,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214656.1;locus_tag=AL42_RS06490;product=DNA-3-methyladenine glycosylase family protein;protein_id=WP_003400956.1;transl_table=11 NZ_KK316784.1 RefSeq gene 167062 168540 . - . ID=gene-AL42_RS06495;Name=AL42_RS06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06495;old_locus_tag=AL42_00149 NZ_KK316784.1 Protein Homology CDS 167062 168540 . - 0 ID=cds-WP_003899828.1;Parent=gene-AL42_RS06495;Dbxref=GenBank:WP_003899828.1;Name=WP_003899828.1;Ontology_term=GO:0005247,GO:0034707;gbkey=CDS;go_component=chloride channel complex|0034707||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214657.1;locus_tag=AL42_RS06495;product=chloride channel protein;protein_id=WP_003899828.1;transl_table=11 NZ_KK316784.1 RefSeq gene 168849 169484 . + . ID=gene-AL42_RS0104155;Name=AL42_RS0104155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0104155;old_locus_tag=AL42_00150 NZ_KK316784.1 Protein Homology CDS 168849 169484 . + 0 ID=cds-WP_003911117.1;Parent=gene-AL42_RS0104155;Dbxref=GenBank:WP_003911117.1;Name=WP_003911117.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911117.1;locus_tag=AL42_RS0104155;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003911117.1;transl_table=11 NZ_KK316784.1 RefSeq gene 169573 170526 . + . ID=gene-AL42_RS06500;Name=AL42_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06500;old_locus_tag=AL42_00151 NZ_KK316784.1 Protein Homology CDS 169573 170526 . + 0 ID=cds-WP_003899829.1;Parent=gene-AL42_RS06500;Dbxref=GenBank:WP_003899829.1;Name=WP_003899829.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214659.1;locus_tag=AL42_RS06500;product=class I SAM-dependent methyltransferase;protein_id=WP_003899829.1;transl_table=11 NZ_KK316784.1 RefSeq gene 170569 171501 . + . ID=gene-AL42_RS06505;Name=AL42_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06505;old_locus_tag=AL42_00152 NZ_KK316784.1 Protein Homology CDS 170569 171501 . + 0 ID=cds-WP_003900814.1;Parent=gene-AL42_RS06505;Dbxref=GenBank:WP_003900814.1;Name=WP_003900814.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214660.1;locus_tag=AL42_RS06505;product=class I SAM-dependent methyltransferase;protein_id=WP_003900814.1;transl_table=11 NZ_KK316784.1 RefSeq gene 171641 173116 . + . ID=gene-AL42_RS06510;Name=AL42_RS06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06510;old_locus_tag=AL42_00153 NZ_KK316784.1 Protein Homology CDS 171641 173116 . + 0 ID=cds-WP_003913557.1;Parent=gene-AL42_RS06510;Dbxref=GenBank:WP_003913557.1;Name=WP_003913557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016705823.1;locus_tag=AL42_RS06510;product=aldehyde dehydrogenase family protein;protein_id=WP_003913557.1;transl_table=11 NZ_KK316784.1 RefSeq gene 173191 174051 . + . ID=gene-AL42_RS06515;Name=AL42_RS06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06515;old_locus_tag=AL42_00154 NZ_KK316784.1 Protein Homology CDS 173191 174051 . + 0 ID=cds-WP_003400979.1;Parent=gene-AL42_RS06515;Dbxref=GenBank:WP_003400979.1;Name=WP_003400979.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214662.1;locus_tag=AL42_RS06515;product=SDR family oxidoreductase;protein_id=WP_003400979.1;transl_table=11 NZ_KK316784.1 RefSeq gene 174058 175026 . + . ID=gene-AL42_RS06520;Name=AL42_RS06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06520;old_locus_tag=AL42_00155 NZ_KK316784.1 Protein Homology CDS 174058 175026 . + 0 ID=cds-WP_003400985.1;Parent=gene-AL42_RS06520;Dbxref=GenBank:WP_003400985.1;Name=WP_003400985.1;Ontology_term=GO:0016491,GO:0016655,GO:0048038,GO:0070402;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,quinone binding|0048038||IEA,NADPH binding|0070402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214663.1;locus_tag=AL42_RS06520;product=NADPH:quinone oxidoreductase family protein;protein_id=WP_003400985.1;transl_table=11 NZ_KK316784.1 RefSeq gene 175023 175310 . - . ID=gene-AL42_RS06525;Name=AL42_RS06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06525;old_locus_tag=AL42_00156 NZ_KK316784.1 Protein Homology CDS 175023 175310 . - 0 ID=cds-WP_003400989.1;Parent=gene-AL42_RS06525;Dbxref=GenBank:WP_003400989.1;Name=WP_003400989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214664.1;locus_tag=AL42_RS06525;product=hypothetical protein;protein_id=WP_003400989.1;transl_table=11 NZ_KK316784.1 RefSeq gene 175901 177583 . - . ID=gene-AL42_RS06530;Name=AL42_RS06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06530;old_locus_tag=AL42_00157 NZ_KK316784.1 Protein Homology CDS 175901 177583 . - 0 ID=cds-WP_003911119.1;Parent=gene-AL42_RS06530;Dbxref=GenBank:WP_003911119.1;Name=WP_003911119.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912517.1;locus_tag=AL42_RS06530;product=PE family protein;protein_id=WP_003911119.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 177733 179387 . - . ID=gene-AL42_RS06535;Name=AL42_RS06535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS06535;old_locus_tag=AL42_00158;pseudo=true NZ_KK316784.1 Protein Homology CDS 177733 179387 . - 0 ID=cds-AL42_RS06535;Parent=gene-AL42_RS06535;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020730540.1;locus_tag=AL42_RS06535;product=PE family protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 179513 180343 . - . ID=gene-AL42_RS06540;Name=ptbB;gbkey=Gene;gene=ptbB;gene_biotype=protein_coding;locus_tag=AL42_RS06540;old_locus_tag=AL42_00159 NZ_KK316784.1 Protein Homology CDS 179513 180343 . - 0 ID=cds-WP_003401010.1;Parent=gene-AL42_RS06540;Dbxref=GenBank:WP_003401010.1;Name=WP_003401010.1;gbkey=CDS;gene=ptbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214667.1;locus_tag=AL42_RS06540;product=tyrosine-protein phosphatase PtbB;protein_id=WP_003401010.1;transl_table=11 NZ_KK316784.1 RefSeq gene 180345 181556 . - . ID=gene-AL42_RS06545;Name=AL42_RS06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06545;old_locus_tag=AL42_00160 NZ_KK316784.1 Protein Homology CDS 180345 181556 . - 0 ID=cds-WP_003401015.1;Parent=gene-AL42_RS06545;Dbxref=GenBank:WP_003401015.1;Name=WP_003401015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214668.1;locus_tag=AL42_RS06545;product=acyl-CoA dehydrogenase;protein_id=WP_003401015.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 181673 181919 . + . ID=gene-AL42_RS25410;Name=AL42_RS25410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS25410;partial=true;pseudo=true;start_range=.,181673 NZ_KK316784.1 Protein Homology CDS 181673 181919 . + 0 ID=cds-AL42_RS25410;Parent=gene-AL42_RS25410;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009956636.1;locus_tag=AL42_RS25410;partial=true;product=DUF1348 family protein;pseudo=true;start_range=.,181673;transl_table=11 NZ_KK316784.1 RefSeq gene 181980 183080 . + . ID=gene-AL42_RS06550;Name=pntAa;gbkey=Gene;gene=pntAa;gene_biotype=protein_coding;locus_tag=AL42_RS06550;old_locus_tag=AL42_00161 NZ_KK316784.1 Protein Homology CDS 181980 183080 . + 0 ID=cds-WP_003401026.1;Parent=gene-AL42_RS06550;Dbxref=GenBank:WP_003401026.1;Name=WP_003401026.1;Ontology_term=GO:1902600;gbkey=CDS;gene=pntAa;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214669.1;locus_tag=AL42_RS06550;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_003401026.1;transl_table=11 NZ_KK316784.1 RefSeq gene 183081 183413 . + . ID=gene-AL42_RS06555;Name=pntAb;gbkey=Gene;gene=pntAb;gene_biotype=protein_coding;locus_tag=AL42_RS06555;old_locus_tag=AL42_00162 NZ_KK316784.1 Protein Homology CDS 183081 183413 . + 0 ID=cds-WP_003401030.1;Parent=gene-AL42_RS06555;Dbxref=GenBank:WP_003401030.1;Name=WP_003401030.1;gbkey=CDS;gene=pntAb;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214670.1;locus_tag=AL42_RS06555;product=NAD(P) transhydrogenase subunit alpha part 2;protein_id=WP_003401030.1;transl_table=11 NZ_KK316784.1 RefSeq gene 183410 184837 . + . ID=gene-AL42_RS06560;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=AL42_RS06560;old_locus_tag=AL42_00163 NZ_KK316784.1 Protein Homology CDS 183410 184837 . + 0 ID=cds-WP_003899835.1;Parent=gene-AL42_RS06560;Dbxref=GenBank:WP_003899835.1;Name=WP_003899835.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214671.1;locus_tag=AL42_RS06560;product=NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta;protein_id=WP_003899835.1;transl_table=11 NZ_KK316784.1 RefSeq gene 184853 184981 . - . ID=gene-AL42_RS06565;Name=AL42_RS06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06565;old_locus_tag=AL42_00164 NZ_KK316784.1 Protein Homology CDS 184853 184981 . - 0 ID=cds-WP_003910049.1;Parent=gene-AL42_RS06565;Dbxref=GenBank:WP_003910049.1;Name=WP_003910049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007408797.1;locus_tag=AL42_RS06565;product=hypothetical protein;protein_id=WP_003910049.1;transl_table=11 NZ_KK316784.1 RefSeq gene 185143 185787 . + . ID=gene-AL42_RS06570;Name=AL42_RS06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06570;old_locus_tag=AL42_00165 NZ_KK316784.1 Protein Homology CDS 185143 185787 . + 0 ID=cds-WP_003401044.1;Parent=gene-AL42_RS06570;Dbxref=GenBank:WP_003401044.1;Name=WP_003401044.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214672.1;locus_tag=AL42_RS06570;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003401044.1;transl_table=11 NZ_KK316784.1 RefSeq gene 185791 187197 . - . ID=gene-AL42_RS06575;Name=AL42_RS06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06575;old_locus_tag=AL42_00166 NZ_KK316784.1 Protein Homology CDS 185791 187197 . - 0 ID=cds-WP_003401047.1;Parent=gene-AL42_RS06575;Dbxref=GenBank:WP_003401047.1;Name=WP_003401047.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177697.1;locus_tag=AL42_RS06575;product=PE family protein;protein_id=WP_003401047.1;transl_table=11 NZ_KK316784.1 RefSeq gene 187289 188797 . - . ID=gene-AL42_RS06580;Name=AL42_RS06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06580;old_locus_tag=AL42_00167 NZ_KK316784.1 Protein Homology CDS 187289 188797 . - 0 ID=cds-WP_003900817.1;Parent=gene-AL42_RS06580;Dbxref=GenBank:WP_003900817.1;Name=WP_003900817.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177698.1;locus_tag=AL42_RS06580;product=PE family protein;protein_id=WP_003900817.1;transl_table=11 NZ_KK316784.1 RefSeq gene 188965 190314 . + . ID=gene-AL42_RS06585;Name=AL42_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06585;old_locus_tag=AL42_00168 NZ_KK316784.1 Protein Homology CDS 188965 190314 . + 0 ID=cds-WP_003401056.1;Parent=gene-AL42_RS06585;Dbxref=GenBank:WP_003401056.1;Name=WP_003401056.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214675.1;locus_tag=AL42_RS06585;product=FAD-binding oxidoreductase;protein_id=WP_003401056.1;transl_table=11 NZ_KK316784.1 RefSeq gene 190342 191460 . - . ID=gene-AL42_RS06590;Name=AL42_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06590;old_locus_tag=AL42_00169 NZ_KK316784.1 Protein Homology CDS 190342 191460 . - 0 ID=cds-WP_003901814.1;Parent=gene-AL42_RS06590;Dbxref=GenBank:WP_003901814.1;Name=WP_003901814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003914562.1;locus_tag=AL42_RS06590;product=alcohol dehydrogenase catalytic domain-containing protein;protein_id=WP_003901814.1;transl_table=11 NZ_KK316784.1 RefSeq gene 191475 191930 . + . ID=gene-AL42_RS06595;Name=AL42_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06595;old_locus_tag=AL42_00170 NZ_KK316784.1 Protein Homology CDS 191475 191930 . + 0 ID=cds-WP_003401060.1;Parent=gene-AL42_RS06595;Dbxref=GenBank:WP_003401060.1;Name=WP_003401060.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214677.1;locus_tag=AL42_RS06595;product=acyl-CoA thioesterase;protein_id=WP_003401060.1;transl_table=11 NZ_KK316784.1 RefSeq gene 192029 192469 . + . ID=gene-AL42_RS06600;Name=AL42_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06600;old_locus_tag=AL42_00171 NZ_KK316784.1 Protein Homology CDS 192029 192469 . + 0 ID=cds-WP_003917895.1;Parent=gene-AL42_RS06600;Dbxref=GenBank:WP_003917895.1;Name=WP_003917895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003874167.1;locus_tag=AL42_RS06600;product=SRPBCC family protein;protein_id=WP_003917895.1;transl_table=11 NZ_KK316784.1 RefSeq gene 192483 193175 . - . ID=gene-AL42_RS0104175;Name=AL42_RS0104175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0104175;old_locus_tag=AL42_00172 NZ_KK316784.1 Protein Homology CDS 192483 193175 . - 0 ID=cds-WP_003401065.1;Parent=gene-AL42_RS0104175;Dbxref=GenBank:WP_003401065.1;Name=WP_003401065.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003401065.1;locus_tag=AL42_RS0104175;product=GntR family transcriptional regulator;protein_id=WP_003401065.1;transl_table=11 NZ_KK316784.1 RefSeq gene 193353 195017 . + . ID=gene-AL42_RS06605;Name=fadD5;gbkey=Gene;gene=fadD5;gene_biotype=protein_coding;locus_tag=AL42_RS06605;old_locus_tag=AL42_00173 NZ_KK316784.1 Protein Homology CDS 193353 195017 . + 0 ID=cds-WP_003899837.1;Parent=gene-AL42_RS06605;Dbxref=GenBank:WP_003899837.1;Name=WP_003899837.1;gbkey=CDS;gene=fadD5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214680.1;locus_tag=AL42_RS06605;product=fatty-acid--CoA ligase FadD5;protein_id=WP_003899837.1;transl_table=11 NZ_KK316784.1 RefSeq gene 195221 196018 . + . ID=gene-AL42_RS06610;Name=AL42_RS06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06610;old_locus_tag=AL42_00174 NZ_KK316784.1 Protein Homology CDS 195221 196018 . + 0 ID=cds-WP_003401074.1;Parent=gene-AL42_RS06610;Dbxref=GenBank:WP_003401074.1;Name=WP_003401074.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214681.1;locus_tag=AL42_RS06610;product=MlaE family ABC transporter permease;protein_id=WP_003401074.1;transl_table=11 NZ_KK316784.1 RefSeq gene 196020 196889 . + . ID=gene-AL42_RS06615;Name=AL42_RS06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06615;old_locus_tag=AL42_00175 NZ_KK316784.1 Protein Homology CDS 196020 196889 . + 0 ID=cds-WP_003401077.1;Parent=gene-AL42_RS06615;Dbxref=GenBank:WP_003401077.1;Name=WP_003401077.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214682.1;locus_tag=AL42_RS06615;product=MlaE family ABC transporter permease;protein_id=WP_003401077.1;transl_table=11 NZ_KK316784.1 RefSeq gene 196894 198258 . + . ID=gene-AL42_RS06620;Name=AL42_RS06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06620;old_locus_tag=AL42_00176 NZ_KK316784.1 Protein Homology CDS 196894 198258 . + 0 ID=cds-WP_003401078.1;Parent=gene-AL42_RS06620;Dbxref=GenBank:WP_003401078.1;Name=WP_003401078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177701.1;locus_tag=AL42_RS06620;product=MCE family protein;protein_id=WP_003401078.1;transl_table=11 NZ_KK316784.1 RefSeq gene 198255 199295 . + . ID=gene-AL42_RS06625;Name=AL42_RS06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06625;old_locus_tag=AL42_00177 NZ_KK316784.1 Protein Homology CDS 198255 199295 . + 0 ID=cds-WP_003899839.1;Parent=gene-AL42_RS06625;Dbxref=GenBank:WP_003899839.1;Name=WP_003899839.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214684.1;locus_tag=AL42_RS06625;product=virulence factor Mce family protein;protein_id=WP_003899839.1;transl_table=11 NZ_KK316784.1 RefSeq gene 199292 200839 . + . ID=gene-AL42_RS06630;Name=AL42_RS06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06630;old_locus_tag=AL42_00178 NZ_KK316784.1 Protein Homology CDS 199292 200839 . + 0 ID=cds-WP_003901818.1;Parent=gene-AL42_RS06630;Dbxref=GenBank:WP_003901818.1;Name=WP_003901818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214685.1;locus_tag=AL42_RS06630;product=virulence factor Mce family protein;protein_id=WP_003901818.1;transl_table=11 NZ_KK316784.1 RefSeq gene 200836 202428 . + . ID=gene-AL42_RS06635;Name=AL42_RS06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06635;old_locus_tag=AL42_00179 NZ_KK316784.1 Protein Homology CDS 200836 202428 . + 0 ID=cds-WP_003911067.1;Parent=gene-AL42_RS06635;Dbxref=GenBank:WP_003911067.1;Name=WP_003911067.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214686.1;locus_tag=AL42_RS06635;product=virulence factor Mce family protein;protein_id=WP_003911067.1;transl_table=11 NZ_KK316784.1 RefSeq gene 202425 203597 . + . ID=gene-AL42_RS06640;Name=lprK;gbkey=Gene;gene=lprK;gene_biotype=protein_coding;locus_tag=AL42_RS06640;old_locus_tag=AL42_00180 NZ_KK316784.1 Protein Homology CDS 202425 203597 . + 0 ID=cds-WP_003899841.1;Parent=gene-AL42_RS06640;Dbxref=GenBank:WP_003899841.1;Name=WP_003899841.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;gene=lprK;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214687.1;locus_tag=AL42_RS06640;product=virulence factor Mce family protein;protein_id=WP_003899841.1;transl_table=11 NZ_KK316784.1 RefSeq gene 203591 205138 . + . ID=gene-AL42_RS06645;Name=AL42_RS06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06645;old_locus_tag=AL42_00181 NZ_KK316784.1 Protein Homology CDS 203591 205138 . + 0 ID=cds-WP_003401091.1;Parent=gene-AL42_RS06645;Dbxref=GenBank:WP_003401091.1;Name=WP_003401091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214688.1;locus_tag=AL42_RS06645;product=virulence factor Mce family protein;protein_id=WP_003401091.1;transl_table=11 NZ_KK316784.1 RefSeq gene 205174 205815 . + . ID=gene-AL42_RS06650;Name=AL42_RS06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06650;old_locus_tag=AL42_00182 NZ_KK316784.1 Protein Homology CDS 205174 205815 . + 0 ID=cds-WP_003401093.1;Parent=gene-AL42_RS06650;Dbxref=GenBank:WP_003401093.1;Name=WP_003401093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214689.3;locus_tag=AL42_RS06650;product=membrane protein;protein_id=WP_003401093.1;transl_table=11 NZ_KK316784.1 RefSeq gene 205812 206780 . + . ID=gene-AL42_RS06655;Name=AL42_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06655;old_locus_tag=AL42_00183 NZ_KK316784.1 Protein Homology CDS 205812 206780 . + 0 ID=cds-WP_003899843.1;Parent=gene-AL42_RS06655;Dbxref=GenBank:WP_003899843.1;Name=WP_003899843.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214690.1;locus_tag=AL42_RS06655;product=RDD family protein;protein_id=WP_003899843.1;transl_table=11 NZ_KK316784.1 RefSeq gene 206777 207331 . + . ID=gene-AL42_RS06660;Name=AL42_RS06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06660;old_locus_tag=AL42_00184 NZ_KK316784.1 Protein Homology CDS 206777 207331 . + 0 ID=cds-WP_003401099.1;Parent=gene-AL42_RS06660;Dbxref=GenBank:WP_003401099.1;Name=WP_003401099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003401099.1;locus_tag=AL42_RS06660;product=mce1 operon protein;protein_id=WP_003401099.1;transl_table=11 NZ_KK316784.1 RefSeq gene 207298 208032 . + . ID=gene-AL42_RS06665;Name=AL42_RS06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06665;old_locus_tag=AL42_00185 NZ_KK316784.1 Protein Homology CDS 207298 208032 . + 0 ID=cds-WP_003899844.1;Parent=gene-AL42_RS06665;Dbxref=GenBank:WP_003899844.1;Name=WP_003899844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214692.1;locus_tag=AL42_RS06665;product=Mce associated membrane protein;protein_id=WP_003899844.1;transl_table=11 NZ_KK316784.1 RefSeq gene 208063 209172 . - . ID=gene-AL42_RS06670;Name=lprO;gbkey=Gene;gene=lprO;gene_biotype=protein_coding;locus_tag=AL42_RS06670;old_locus_tag=AL42_00186 NZ_KK316784.1 Protein Homology CDS 208063 209172 . - 0 ID=cds-WP_003899845.1;Parent=gene-AL42_RS06670;Dbxref=GenBank:WP_003899845.1;Name=WP_003899845.1;gbkey=CDS;gene=lprO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214693.1;locus_tag=AL42_RS06670;product=phosphodiester glycosidase family protein;protein_id=WP_003899845.1;transl_table=11 NZ_KK316784.1 RefSeq gene 209252 210610 . - . ID=gene-AL42_RS06675;Name=AL42_RS06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06675;old_locus_tag=AL42_00187 NZ_KK316784.1 Protein Homology CDS 209252 210610 . - 0 ID=cds-WP_003899846.1;Parent=gene-AL42_RS06675;Dbxref=GenBank:WP_003899846.1;Name=WP_003899846.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214694.1;locus_tag=AL42_RS06675;product=YhgE/Pip domain-containing protein;protein_id=WP_003899846.1;transl_table=11 NZ_KK316784.1 RefSeq gene 210637 211371 . - . ID=gene-AL42_RS06680;Name=AL42_RS06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06680;old_locus_tag=AL42_00188 NZ_KK316784.1 Protein Homology CDS 210637 211371 . - 0 ID=cds-WP_003401107.1;Parent=gene-AL42_RS06680;Dbxref=GenBank:WP_003401107.1;Name=WP_003401107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214695.1;locus_tag=AL42_RS06680;product=pirin family protein;protein_id=WP_003401107.1;transl_table=11 NZ_KK316784.1 RefSeq gene 211388 212500 . - . ID=gene-AL42_RS06685;Name=sigG;gbkey=Gene;gene=sigG;gene_biotype=protein_coding;locus_tag=AL42_RS06685;old_locus_tag=AL42_00189 NZ_KK316784.1 Protein Homology CDS 211388 212500 . - 0 ID=cds-WP_003902615.1;Parent=gene-AL42_RS06685;Dbxref=GenBank:WP_003902615.1;Name=WP_003902615.1;gbkey=CDS;gene=sigG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214696.1;locus_tag=AL42_RS06685;product=sigma-70 family RNA polymerase sigma factor SigG;protein_id=WP_003902615.1;transl_table=11 NZ_KK316784.1 RefSeq gene 212448 213287 . + . ID=gene-AL42_RS06690;Name=AL42_RS06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06690;old_locus_tag=AL42_00190 NZ_KK316784.1 Protein Homology CDS 212448 213287 . + 0 ID=cds-WP_003401112.1;Parent=gene-AL42_RS06690;Dbxref=GenBank:WP_003401112.1;Name=WP_003401112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214697.2;locus_tag=AL42_RS06690;product=monoacylglycerol lipase;protein_id=WP_003401112.1;transl_table=11 NZ_KK316784.1 RefSeq gene 213329 214078 . + . ID=gene-AL42_RS06695;Name=AL42_RS06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06695;old_locus_tag=AL42_00191 NZ_KK316784.1 Protein Homology CDS 213329 214078 . + 0 ID=cds-WP_003401116.1;Parent=gene-AL42_RS06695;Dbxref=GenBank:WP_003401116.1;Name=WP_003401116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214698.1;locus_tag=AL42_RS06695;product=DUF2786 domain-containing protein;protein_id=WP_003401116.1;transl_table=11 NZ_KK316784.1 RefSeq gene 214075 214584 . + . ID=gene-AL42_RS06700;Name=AL42_RS06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06700;old_locus_tag=AL42_00192 NZ_KK316784.1 Protein Homology CDS 214075 214584 . + 0 ID=cds-WP_003911068.1;Parent=gene-AL42_RS06700;Dbxref=GenBank:WP_003911068.1;Name=WP_003911068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214699.1;locus_tag=AL42_RS06700;product=TIGR04338 family metallohydrolase;protein_id=WP_003911068.1;transl_table=11 NZ_KK316784.1 RefSeq gene 214629 216704 . + . ID=gene-AL42_RS06705;Name=bglS;gbkey=Gene;gene=bglS;gene_biotype=protein_coding;locus_tag=AL42_RS06705;old_locus_tag=AL42_00193 NZ_KK316784.1 Protein Homology CDS 214629 216704 . + 0 ID=cds-WP_003401122.1;Parent=gene-AL42_RS06705;Dbxref=GenBank:WP_003401122.1;Name=WP_003401122.1;Ontology_term=GO:0030245,GO:0008422;gbkey=CDS;gene=bglS;go_function=beta-glucosidase activity|0008422||IEA;go_process=cellulose catabolic process|0030245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012392408.1;locus_tag=AL42_RS06705;product=beta-glucosidase;protein_id=WP_003401122.1;transl_table=11 NZ_KK316784.1 RefSeq gene 216750 216911 . - . ID=gene-AL42_RS06710;Name=mymT;gbkey=Gene;gene=mymT;gene_biotype=protein_coding;locus_tag=AL42_RS06710;old_locus_tag=AL42_00194 NZ_KK316784.1 Protein Homology CDS 216750 216911 . - 0 ID=cds-WP_010886068.1;Parent=gene-AL42_RS06710;Dbxref=GenBank:WP_010886068.1;Name=WP_010886068.1;gbkey=CDS;gene=mymT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004837046.2;locus_tag=AL42_RS06710;product=copper-binding metallothionein MymT;protein_id=WP_010886068.1;transl_table=11 NZ_KK316784.1 RefSeq gene 217065 217727 . + . ID=gene-AL42_RS06715;Name=AL42_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06715;old_locus_tag=AL42_00195 NZ_KK316784.1 Protein Homology CDS 217065 217727 . + 0 ID=cds-WP_003401129.1;Parent=gene-AL42_RS06715;Dbxref=GenBank:WP_003401129.1;Name=WP_003401129.1;Ontology_term=GO:0032259,GO:0008168,GO:0008171,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,O-methyltransferase activity|0008171||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214701.1;locus_tag=AL42_RS06715;product=O-methyltransferase;protein_id=WP_003401129.1;transl_table=11 NZ_KK316784.1 RefSeq gene 217846 218277 . + . ID=gene-AL42_RS06720;Name=AL42_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06720;old_locus_tag=AL42_00196 NZ_KK316784.1 Protein Homology CDS 217846 218277 . + 0 ID=cds-WP_003401141.1;Parent=gene-AL42_RS06720;Dbxref=GenBank:WP_003401141.1;Name=WP_003401141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214702.1;locus_tag=AL42_RS06720;product=SPW repeat protein;protein_id=WP_003401141.1;transl_table=11 NZ_KK316784.1 RefSeq gene 218356 220083 . - . ID=gene-AL42_RS06725;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=AL42_RS06725;old_locus_tag=AL42_00197 NZ_KK316784.1 Protein Homology CDS 218356 220083 . - 0 ID=cds-WP_003900824.1;Parent=gene-AL42_RS06725;Dbxref=GenBank:WP_003900824.1;Name=WP_003900824.1;Ontology_term=GO:0009082,GO:0004160,GO:0051536;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214703.1;locus_tag=AL42_RS06725;product=dihydroxy-acid dehydratase;protein_id=WP_003900824.1;transl_table=11 NZ_KK316784.1 RefSeq gene 220231 220521 . + . ID=gene-AL42_RS06730;Name=AL42_RS06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06730;old_locus_tag=AL42_00198 NZ_KK316784.1 Protein Homology CDS 220231 220521 . + 0 ID=cds-WP_003401147.1;Parent=gene-AL42_RS06730;Dbxref=GenBank:WP_003401147.1;Name=WP_003401147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214704.1;locus_tag=AL42_RS06730;product=copper-sensing transcriptional repressor RicR;protein_id=WP_003401147.1;transl_table=11 NZ_KK316784.1 RefSeq gene 220649 221890 . + . ID=gene-AL42_RS06735;Name=AL42_RS06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06735;old_locus_tag=AL42_00199 NZ_KK316784.1 Protein Homology CDS 220649 221890 . + 0 ID=cds-WP_003902617.1;Parent=gene-AL42_RS06735;Dbxref=GenBank:WP_003902617.1;Name=WP_003902617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214705.1;locus_tag=AL42_RS06735;product=Rv0191 family MFS efflux transporter;protein_id=WP_003902617.1;transl_table=11 NZ_KK316784.1 RefSeq gene 221924 223024 . + . ID=gene-AL42_RS06740;Name=ldtMt4;gbkey=Gene;gene=ldtMt4;gene_biotype=protein_coding;locus_tag=AL42_RS06740;old_locus_tag=AL42_00200 NZ_KK316784.1 Protein Homology CDS 221924 223024 . + 0 ID=cds-WP_003899849.1;Parent=gene-AL42_RS06740;Dbxref=GenBank:WP_003899849.1;Name=WP_003899849.1;gbkey=CDS;gene=ldtMt4;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899849.1;locus_tag=AL42_RS06740;product=L%2CD-transpeptidase LdtMt4;protein_id=WP_003899849.1;transl_table=11 NZ_KK316784.1 RefSeq gene 223084 224931 . - . ID=gene-AL42_RS06745;Name=AL42_RS06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06745;old_locus_tag=AL42_00202 NZ_KK316784.1 Protein Homology CDS 223084 224931 . - 0 ID=cds-WP_003899850.1;Parent=gene-AL42_RS06745;Dbxref=GenBank:WP_003899850.1;Name=WP_003899850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214707.1;locus_tag=AL42_RS06745;product=hypothetical protein;protein_id=WP_003899850.1;transl_table=11 NZ_KK316784.1 RefSeq gene 225238 228822 . + . ID=gene-AL42_RS06750;Name=AL42_RS06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06750;old_locus_tag=AL42_00203 NZ_KK316784.1 Protein Homology CDS 225238 228822 . + 0 ID=cds-WP_003902618.1;Parent=gene-AL42_RS06750;Dbxref=GenBank:WP_003902618.1;Name=WP_003902618.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214708.1;locus_tag=AL42_RS06750;product=ABC transporter ATP-binding protein;protein_id=WP_003902618.1;transl_table=11 NZ_KK316784.1 RefSeq gene 229260 229895 . + . ID=gene-AL42_RS06755;Name=AL42_RS06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06755;old_locus_tag=AL42_00204 NZ_KK316784.1 Protein Homology CDS 229260 229895 . + 0 ID=cds-WP_003901824.1;Parent=gene-AL42_RS06755;Dbxref=GenBank:WP_003901824.1;Name=WP_003901824.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214709.1;locus_tag=AL42_RS06755;product=response regulator transcription factor;protein_id=WP_003901824.1;transl_table=11 NZ_KK316784.1 RefSeq gene 230008 230592 . + . ID=gene-AL42_RS06760;Name=AL42_RS06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06760;old_locus_tag=AL42_00205 NZ_KK316784.1 Protein Homology CDS 230008 230592 . + 0 ID=cds-WP_003401168.1;Parent=gene-AL42_RS06760;Dbxref=GenBank:WP_003401168.1;Name=WP_003401168.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214710.1;locus_tag=AL42_RS06760;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003401168.1;transl_table=11 NZ_KK316784.1 RefSeq gene 230592 232838 . + . ID=gene-AL42_RS06765;Name=AL42_RS06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06765;old_locus_tag=AL42_00206 NZ_KK316784.1 Protein Homology CDS 230592 232838 . + 0 ID=cds-WP_003913548.1;Parent=gene-AL42_RS06765;Dbxref=GenBank:WP_003913548.1;Name=WP_003913548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015302437.1;locus_tag=AL42_RS06765;product=molybdopterin oxidoreductase family protein;protein_id=WP_003913548.1;transl_table=11 NZ_KK316784.1 RefSeq gene 232879 234870 . - . ID=gene-AL42_RS06770;Name=zmp1;gbkey=Gene;gene=zmp1;gene_biotype=protein_coding;locus_tag=AL42_RS06770;old_locus_tag=AL42_00207 NZ_KK316784.1 Protein Homology CDS 232879 234870 . - 0 ID=cds-WP_003401172.1;Parent=gene-AL42_RS06770;Dbxref=GenBank:WP_003401172.1;Name=WP_003401172.1;gbkey=CDS;gene=zmp1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214712.1;locus_tag=AL42_RS06770;product=zinc metalloprotease Zmp1;protein_id=WP_003401172.1;transl_table=11 NZ_KK316784.1 RefSeq gene 234913 235572 . + . ID=gene-AL42_RS06775;Name=AL42_RS06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06775;old_locus_tag=AL42_00208 NZ_KK316784.1 Protein Homology CDS 234913 235572 . + 0 ID=cds-WP_003401181.1;Parent=gene-AL42_RS06775;Dbxref=GenBank:WP_003401181.1;Name=WP_003401181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214713.1;locus_tag=AL42_RS06775;product=hypothetical protein;protein_id=WP_003401181.1;transl_table=11 NZ_KK316784.1 RefSeq gene 235569 236258 . + . ID=gene-AL42_RS06780;Name=AL42_RS06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06780;old_locus_tag=AL42_00209 NZ_KK316784.1 Protein Homology CDS 235569 236258 . + 0 ID=cds-WP_003401184.1;Parent=gene-AL42_RS06780;Dbxref=GenBank:WP_003401184.1;Name=WP_003401184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214714.1;locus_tag=AL42_RS06780;product=hypothetical protein;protein_id=WP_003401184.1;transl_table=11 NZ_KK316784.1 RefSeq gene 236255 236758 . - . ID=gene-AL42_RS06785;Name=AL42_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06785;old_locus_tag=AL42_00210 NZ_KK316784.1 Protein Homology CDS 236255 236758 . - 0 ID=cds-WP_003401187.1;Parent=gene-AL42_RS06785;Dbxref=GenBank:WP_003401187.1;Name=WP_003401187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214715.1;locus_tag=AL42_RS06785;product=hypothetical protein;protein_id=WP_003401187.1;transl_table=11 NZ_KK316784.1 RefSeq gene 236755 239655 . - . ID=gene-AL42_RS06790;Name=mmpL11;gbkey=Gene;gene=mmpL11;gene_biotype=protein_coding;locus_tag=AL42_RS06790;old_locus_tag=AL42_00211 NZ_KK316784.1 Protein Homology CDS 236755 239655 . - 0 ID=cds-WP_003401190.1;Parent=gene-AL42_RS06790;Dbxref=GenBank:WP_003401190.1;Name=WP_003401190.1;gbkey=CDS;gene=mmpL11;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214716.1;locus_tag=AL42_RS06790;product=RND transporter MmpL11;protein_id=WP_003401190.1;transl_table=11 NZ_KK316784.1 RefSeq gene 239877 240287 . + . ID=gene-AL42_RS06795;Name=AL42_RS06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06795;old_locus_tag=AL42_00212 NZ_KK316784.1 Protein Homology CDS 239877 240287 . + 0 ID=cds-WP_003401194.1;Parent=gene-AL42_RS06795;Dbxref=GenBank:WP_003401194.1;Name=WP_003401194.1;Ontology_term=GO:0015886,GO:0020037;gbkey=CDS;go_function=heme binding|0020037||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214717.1;locus_tag=AL42_RS06795;product=hemophore;protein_id=WP_003401194.1;transl_table=11 NZ_KK316784.1 RefSeq gene 240339 241577 . - . ID=gene-AL42_RS06800;Name=AL42_RS06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06800;old_locus_tag=AL42_00213 NZ_KK316784.1 Protein Homology CDS 240339 241577 . - 0 ID=cds-WP_003901825.1;Parent=gene-AL42_RS06800;Dbxref=GenBank:WP_003901825.1;Name=WP_003901825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214718.2;locus_tag=AL42_RS06800;product=lysylphosphatidylglycerol synthase transmembrane domain-containing protein;protein_id=WP_003901825.1;transl_table=11 NZ_KK316784.1 RefSeq gene 241747 242850 . + . ID=gene-AL42_RS06805;Name=AL42_RS06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06805;old_locus_tag=AL42_00214 NZ_KK316784.1 Protein Homology CDS 241747 242850 . + 0 ID=cds-WP_003899854.1;Parent=gene-AL42_RS06805;Dbxref=GenBank:WP_003899854.1;Name=WP_003899854.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214719.1;locus_tag=AL42_RS06805;product=AI-2E family transporter;protein_id=WP_003899854.1;transl_table=11 NZ_KK316784.1 RefSeq gene 242847 245681 . - . ID=gene-AL42_RS06810;Name=mmpL3;gbkey=Gene;gene=mmpL3;gene_biotype=protein_coding;locus_tag=AL42_RS06810;old_locus_tag=AL42_00215 NZ_KK316784.1 Protein Homology CDS 242847 245681 . - 0 ID=cds-WP_003899855.1;Parent=gene-AL42_RS06810;Dbxref=GenBank:WP_003899855.1;Name=WP_003899855.1;gbkey=CDS;gene=mmpL3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214720.1;locus_tag=AL42_RS06810;product=trehalose monomycolate RND transporter MmpL3;protein_id=WP_003899855.1;transl_table=11 NZ_KK316784.1 RefSeq gene 245747 246475 . - . ID=gene-AL42_RS06815;Name=AL42_RS06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06815;old_locus_tag=AL42_00216 NZ_KK316784.1 Protein Homology CDS 245747 246475 . - 0 ID=cds-WP_003401202.1;Parent=gene-AL42_RS06815;Dbxref=GenBank:WP_003401202.1;Name=WP_003401202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214721.1;locus_tag=AL42_RS06815;product=NYN domain-containing protein;protein_id=WP_003401202.1;transl_table=11 NZ_KK316784.1 RefSeq gene 246478 247269 . - . ID=gene-AL42_RS06820;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=AL42_RS06820;old_locus_tag=AL42_00217 NZ_KK316784.1 Protein Homology CDS 246478 247269 . - 0 ID=cds-WP_003401204.1;Parent=gene-AL42_RS06820;Dbxref=GenBank:WP_003401204.1;Name=WP_003401204.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214722.1;locus_tag=AL42_RS06820;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_003401204.1;transl_table=11 NZ_KK316784.1 RefSeq gene 247401 248486 . + . ID=gene-AL42_RS06825;Name=AL42_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06825;old_locus_tag=AL42_00218 NZ_KK316784.1 Protein Homology CDS 247401 248486 . + 0 ID=cds-WP_003401206.1;Parent=gene-AL42_RS06825;Dbxref=GenBank:WP_003401206.1;Name=WP_003401206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214723.1;locus_tag=AL42_RS06825;product=hypothetical protein;protein_id=WP_003401206.1;transl_table=11 NZ_KK316784.1 RefSeq gene 248483 249961 . + . ID=gene-AL42_RS06830;Name=AL42_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06830;old_locus_tag=AL42_00219 NZ_KK316784.1 Protein Homology CDS 248483 249961 . + 0 ID=cds-WP_003401208.1;Parent=gene-AL42_RS06830;Dbxref=GenBank:WP_003401208.1;Name=WP_003401208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214724.1;locus_tag=AL42_RS06830;product=hypothetical protein;protein_id=WP_003401208.1;transl_table=11 NZ_KK316784.1 RefSeq gene 250145 251965 . + . ID=gene-AL42_RS06835;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=AL42_RS06835;old_locus_tag=AL42_00220 NZ_KK316784.1 Protein Homology CDS 250145 251965 . + 0 ID=cds-WP_003401212.1;Parent=gene-AL42_RS06835;Dbxref=GenBank:WP_003401212.1;Name=WP_003401212.1;Ontology_term=GO:0006094,GO:0004611,GO:0005525,GO:0017076;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase activity|0004611||IEA,GTP binding|0005525||IEA,purine nucleotide binding|0017076||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214725.1;locus_tag=AL42_RS06835;product=phosphoenolpyruvate carboxykinase (GTP);protein_id=WP_003401212.1;transl_table=11 NZ_KK316784.1 RefSeq gene 252032 253003 . - . ID=gene-AL42_RS06840;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=AL42_RS06840;old_locus_tag=AL42_00221 NZ_KK316784.1 Protein Homology CDS 252032 253003 . - 0 ID=cds-WP_003401213.1;Parent=gene-AL42_RS06840;Dbxref=GenBank:WP_003401213.1;Name=WP_003401213.1;Ontology_term=GO:0009435,GO:0000309;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214726.1;locus_tag=AL42_RS06840;product=nicotinamide-nucleotide adenylyltransferase;protein_id=WP_003401213.1;transl_table=11 NZ_KK316784.1 RefSeq gene 253000 254433 . - . ID=gene-AL42_RS06845;Name=AL42_RS06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06845;old_locus_tag=AL42_00222 NZ_KK316784.1 Protein Homology CDS 253000 254433 . - 0 ID=cds-WP_003911129.1;Parent=gene-AL42_RS06845;Dbxref=GenBank:WP_003911129.1;Name=WP_003911129.1;Ontology_term=GO:0003824,GO:0031419,GO:0051539,GO:1904047;gbkey=CDS;go_function=catalytic activity|0003824||IEA,cobalamin binding|0031419||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911129.1;locus_tag=AL42_RS06845;product=B12-binding domain-containing radical SAM protein;protein_id=WP_003911129.1;transl_table=11 NZ_KK316784.1 RefSeq gene 254523 256040 . + . ID=gene-AL42_RS06850;Name=fadD4;gbkey=Gene;gene=fadD4;gene_biotype=protein_coding;locus_tag=AL42_RS06850;old_locus_tag=AL42_00223 NZ_KK316784.1 Protein Homology CDS 254523 256040 . + 0 ID=cds-WP_003911098.1;Parent=gene-AL42_RS06850;Dbxref=GenBank:WP_003911098.1;Name=WP_003911098.1;gbkey=CDS;gene=fadD4;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009979674.1;locus_tag=AL42_RS06850;product=fatty-acid--CoA ligase FadD4;protein_id=WP_003911098.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 256082 257189 . - . ID=gene-AL42_RS06855;Name=AL42_RS06855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS06855;old_locus_tag=AL42_00224;pseudo=true NZ_KK316784.1 Protein Homology CDS 256082 257189 . - 0 ID=cds-AL42_RS06855;Parent=gene-AL42_RS06855;Note=frameshifted;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016705807.1;locus_tag=AL42_RS06855;product=acyl-CoA dehydrogenase family protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 257276 258289 . + . ID=gene-AL42_RS06860;Name=AL42_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06860;old_locus_tag=AL42_00225 NZ_KK316784.1 Protein Homology CDS 257276 258289 . + 0 ID=cds-WP_003401224.1;Parent=gene-AL42_RS06860;Dbxref=GenBank:WP_003401224.1;Name=WP_003401224.1;Ontology_term=GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214730.1;locus_tag=AL42_RS06860;product=MaoC family dehydratase;protein_id=WP_003401224.1;transl_table=11 NZ_KK316784.1 RefSeq gene 258286 259194 . - . ID=gene-AL42_RS06865;Name=lipW;gbkey=Gene;gene=lipW;gene_biotype=protein_coding;locus_tag=AL42_RS06865;old_locus_tag=AL42_00226 NZ_KK316784.1 Protein Homology CDS 258286 259194 . - 0 ID=cds-WP_003900831.1;Parent=gene-AL42_RS06865;Dbxref=GenBank:WP_003900831.1;Name=WP_003900831.1;Ontology_term=GO:0016787;gbkey=CDS;gene=lipW;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214731.1;locus_tag=AL42_RS06865;product=alpha/beta hydrolase;protein_id=WP_003900831.1;transl_table=11 NZ_KK316784.1 RefSeq gene 259287 260615 . + . ID=gene-AL42_RS06870;Name=AL42_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06870;old_locus_tag=AL42_00227 NZ_KK316784.1 Protein Homology CDS 259287 260615 . + 0 ID=cds-WP_003901829.1;Parent=gene-AL42_RS06870;Dbxref=GenBank:WP_003901829.1;Name=WP_003901829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214732.1;locus_tag=AL42_RS06870;product=molybdopterin-dependent oxidoreductase;protein_id=WP_003901829.1;transl_table=11 NZ_KK316784.1 RefSeq gene 260617 261165 . + . ID=gene-AL42_RS06875;Name=AL42_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06875;old_locus_tag=AL42_00228 NZ_KK316784.1 Protein Homology CDS 260617 261165 . + 0 ID=cds-WP_003401230.1;Parent=gene-AL42_RS06875;Dbxref=GenBank:WP_003401230.1;Name=WP_003401230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214733.1;locus_tag=AL42_RS06875;product=hypothetical protein;protein_id=WP_003401230.1;transl_table=11 NZ_KK316784.1 RefSeq gene 261175 262386 . + . ID=gene-AL42_RS06880;Name=lipC;gbkey=Gene;gene=lipC;gene_biotype=protein_coding;locus_tag=AL42_RS06880;old_locus_tag=AL42_00229 NZ_KK316784.1 Protein Homology CDS 261175 262386 . + 0 ID=cds-WP_003899863.1;Parent=gene-AL42_RS06880;Dbxref=GenBank:WP_003899863.1;Name=WP_003899863.1;gbkey=CDS;gene=lipC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214734.1;locus_tag=AL42_RS06880;product=esterase LipC;protein_id=WP_003899863.1;transl_table=11 NZ_KK316784.1 RefSeq gene 262430 263839 . + . ID=gene-AL42_RS06885;Name=AL42_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06885;old_locus_tag=AL42_00230 NZ_KK316784.1 Protein Homology CDS 262430 263839 . + 0 ID=cds-WP_003901830.1;Parent=gene-AL42_RS06885;Dbxref=GenBank:WP_003901830.1;Name=WP_003901830.1;Ontology_term=GO:0045017,GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;go_process=glycerolipid biosynthetic process|0045017||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214735.1;locus_tag=AL42_RS06885;product=WS/DGAT/MGAT family O-acyltransferase;protein_id=WP_003901830.1;transl_table=11 NZ_KK316784.1 RefSeq gene 263870 264658 . + . ID=gene-AL42_RS06890;Name=AL42_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06890;old_locus_tag=AL42_00231 NZ_KK316784.1 Protein Homology CDS 263870 264658 . + 0 ID=cds-WP_003899864.1;Parent=gene-AL42_RS06890;Dbxref=GenBank:WP_003899864.1;Name=WP_003899864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214736.1;locus_tag=AL42_RS06890;product=crotonase/enoyl-CoA hydratase family protein;protein_id=WP_003899864.1;transl_table=11 NZ_KK316784.1 RefSeq gene 264664 266127 . - . ID=gene-AL42_RS06895;Name=AL42_RS06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06895;old_locus_tag=AL42_00232 NZ_KK316784.1 Protein Homology CDS 264664 266127 . - 0 ID=cds-WP_003902624.1;Parent=gene-AL42_RS06895;Dbxref=GenBank:WP_003902624.1;Name=WP_003902624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214737.1;locus_tag=AL42_RS06895;product=aldehyde dehydrogenase;protein_id=WP_003902624.1;transl_table=11 NZ_KK316784.1 RefSeq gene 266226 266990 . - . ID=gene-AL42_RS06900;Name=AL42_RS06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06900;old_locus_tag=AL42_00233 NZ_KK316784.1 Protein Homology CDS 266226 266990 . - 0 ID=cds-WP_003401240.1;Parent=gene-AL42_RS06900;Dbxref=GenBank:WP_003401240.1;Name=WP_003401240.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214738.1;locus_tag=AL42_RS06900;product=class I SAM-dependent methyltransferase;protein_id=WP_003401240.1;transl_table=11 NZ_KK316784.1 RefSeq gene 267026 268180 . + . ID=gene-AL42_RS06905;Name=AL42_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06905;old_locus_tag=AL42_00234 NZ_KK316784.1 Protein Homology CDS 267026 268180 . + 0 ID=cds-WP_003401246.1;Parent=gene-AL42_RS06905;Dbxref=GenBank:WP_003401246.1;Name=WP_003401246.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214739.1;locus_tag=AL42_RS06905;product=glycosyltransferase family 4 protein;protein_id=WP_003401246.1;transl_table=11 NZ_KK316784.1 RefSeq gene 268197 269927 . - . ID=gene-AL42_RS06910;Name=AL42_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06910;old_locus_tag=AL42_00235 NZ_KK316784.1 Protein Homology CDS 268197 269927 . - 0 ID=cds-WP_003902626.1;Parent=gene-AL42_RS06910;Dbxref=GenBank:WP_003902626.1;Name=WP_003902626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214740.1;locus_tag=AL42_RS06910;product=MmpA family trehalose lipid delivery protein;protein_id=WP_003902626.1;transl_table=11 NZ_KK316784.1 RefSeq gene 269937 271217 . - . ID=gene-AL42_RS06915;Name=AL42_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06915;old_locus_tag=AL42_00236 NZ_KK316784.1 Protein Homology CDS 269937 271217 . - 0 ID=cds-WP_016719572.1;Parent=gene-AL42_RS06915;Dbxref=GenBank:WP_016719572.1;Name=WP_016719572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019284112.1;locus_tag=AL42_RS06915;product=cell envelope lipid trafficking protein PgfA;protein_id=WP_016719572.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 271219 271318 . - . ID=gene-AL42_RS28060;Name=AL42_RS28060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS28060;partial=true;pseudo=true;start_range=.,271219 NZ_KK316784.1 Protein Homology CDS 271219 271318 . - 0 ID=cds-AL42_RS28060;Parent=gene-AL42_RS28060;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215065.1;locus_tag=AL42_RS28060;partial=true;product=hypothetical protein;pseudo=true;start_range=.,271219;transl_table=11 NZ_KK316784.1 RefSeq gene 271418 272641 . + . ID=gene-AL42_RS06920;Name=AL42_RS06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06920;old_locus_tag=AL42_00237 NZ_KK316784.1 Protein Homology CDS 271418 272641 . + 0 ID=cds-WP_003401260.1;Parent=gene-AL42_RS06920;Dbxref=GenBank:WP_003401260.1;Name=WP_003401260.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214742.1;locus_tag=AL42_RS06920;product=acyltransferase family protein;protein_id=WP_003401260.1;transl_table=11 NZ_KK316784.1 RefSeq gene 272669 273082 . - . ID=gene-AL42_RS06925;Name=AL42_RS06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06925;old_locus_tag=AL42_00238 NZ_KK316784.1 Protein Homology CDS 272669 273082 . - 0 ID=cds-WP_003911071.1;Parent=gene-AL42_RS06925;Dbxref=GenBank:WP_003911071.1;Name=WP_003911071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214743.2;locus_tag=AL42_RS06925;product=PIN domain nuclease;protein_id=WP_003911071.1;transl_table=11 NZ_KK316784.1 RefSeq gene 273073 273267 . - . ID=gene-AL42_RS06930;Name=AL42_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06930;old_locus_tag=AL42_00239 NZ_KK316784.1 Protein Homology CDS 273073 273267 . - 0 ID=cds-WP_003911072.1;Parent=gene-AL42_RS06930;Dbxref=GenBank:WP_003911072.1;Name=WP_003911072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911072.1;locus_tag=AL42_RS06930;product=hypothetical protein;protein_id=WP_003911072.1;transl_table=11 NZ_KK316784.1 RefSeq gene 273346 274326 . - . ID=gene-AL42_RS06935;Name=php;gbkey=Gene;gene=php;gene_biotype=protein_coding;locus_tag=AL42_RS06935;old_locus_tag=AL42_00240 NZ_KK316784.1 Protein Homology CDS 273346 274326 . - 0 ID=cds-WP_003900835.1;Parent=gene-AL42_RS06935;Dbxref=GenBank:WP_003900835.1;Name=WP_003900835.1;gbkey=CDS;gene=php;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214744.1;locus_tag=AL42_RS06935;product=phosphotriesterase-related protein;protein_id=WP_003900835.1;transl_table=11 NZ_KK316784.1 RefSeq gene 274421 276127 . + . ID=gene-AL42_RS06940;Name=AL42_RS06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06940;old_locus_tag=AL42_00241 NZ_KK316784.1 Protein Homology CDS 274421 276127 . + 0 ID=cds-WP_003401265.1;Parent=gene-AL42_RS06940;Dbxref=GenBank:WP_003401265.1;Name=WP_003401265.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214745.1;locus_tag=AL42_RS06940;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003401265.1;transl_table=11 NZ_KK316784.1 RefSeq gene 276262 276951 . + . ID=gene-AL42_RS06945;Name=AL42_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06945;old_locus_tag=AL42_00242 NZ_KK316784.1 Protein Homology CDS 276262 276951 . + 0 ID=cds-WP_003401268.1;Parent=gene-AL42_RS06945;Dbxref=GenBank:WP_003401268.1;Name=WP_003401268.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214746.1;locus_tag=AL42_RS06945;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003401268.1;transl_table=11 NZ_KK316784.1 RefSeq gene 276948 277892 . + . ID=gene-AL42_RS06950;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=AL42_RS06950;old_locus_tag=AL42_00243 NZ_KK316784.1 Protein Homology CDS 276948 277892 . + 0 ID=cds-WP_003401270.1;Parent=gene-AL42_RS06950;Dbxref=GenBank:WP_003401270.1;Name=WP_003401270.1;gbkey=CDS;gene=nrdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214747.1;locus_tag=AL42_RS06950;product=R2-like ligand-binding oxidase;protein_id=WP_003401270.1;transl_table=11 NZ_KK316784.1 RefSeq gene 277968 279341 . - . ID=gene-AL42_RS06955;Name=AL42_RS06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06955;old_locus_tag=AL42_00244 NZ_KK316784.1 Protein Homology CDS 277968 279341 . - 0 ID=cds-WP_003912534.1;Parent=gene-AL42_RS06955;Dbxref=GenBank:WP_003912534.1;Name=WP_003912534.1;Ontology_term=GO:0004030;gbkey=CDS;go_function=aldehyde dehydrogenase [NAD(P)+] activity|0004030||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010908967.1;locus_tag=AL42_RS06955;product=NADP-dependent succinic semialdehyde dehydrogenase;protein_id=WP_003912534.1;transl_table=11 NZ_KK316784.1 RefSeq gene 279529 280977 . - . ID=gene-AL42_RS06960;Name=AL42_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06960;old_locus_tag=AL42_00245 NZ_KK316784.1 Protein Homology CDS 279529 280977 . - 0 ID=cds-WP_003401279.1;Parent=gene-AL42_RS06960;Dbxref=GenBank:WP_003401279.1;Name=WP_003401279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214749.1;locus_tag=AL42_RS06960;product=lipase maturation factor family protein;protein_id=WP_003401279.1;transl_table=11 NZ_KK316784.1 RefSeq gene 281012 285214 . - . ID=gene-AL42_RS06965;Name=aftD;gbkey=Gene;gene=aftD;gene_biotype=protein_coding;locus_tag=AL42_RS06965;old_locus_tag=AL42_00246 NZ_KK316784.1 Protein Homology CDS 281012 285214 . - 0 ID=cds-WP_003911073.1;Parent=gene-AL42_RS06965;Dbxref=GenBank:WP_003911073.1;Name=WP_003911073.1;Ontology_term=GO:0016740;gbkey=CDS;gene=aftD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214750.1;locus_tag=AL42_RS06965;product=DUF3367 domain-containing protein;protein_id=WP_003911073.1;transl_table=11 NZ_KK316784.1 RefSeq gene 285261 285434 . - . ID=gene-AL42_RS06970;Name=AL42_RS06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06970;old_locus_tag=AL42_00247 NZ_KK316784.1 Protein Homology CDS 285261 285434 . - 0 ID=cds-WP_003401289.1;Parent=gene-AL42_RS06970;Dbxref=GenBank:WP_003401289.1;Name=WP_003401289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177619.1;locus_tag=AL42_RS06970;product=DUF2613 domain-containing protein;protein_id=WP_003401289.1;transl_table=11 NZ_KK316784.1 RefSeq gene 285549 286715 . + . ID=gene-AL42_RS06975;Name=lpqI;gbkey=Gene;gene=lpqI;gene_biotype=protein_coding;locus_tag=AL42_RS06975;old_locus_tag=AL42_00248 NZ_KK316784.1 Protein Homology CDS 285549 286715 . + 0 ID=cds-WP_003401295.1;Parent=gene-AL42_RS06975;Dbxref=GenBank:WP_003401295.1;Name=WP_003401295.1;gbkey=CDS;gene=lpqI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177702.1;locus_tag=AL42_RS06975;product=beta-N-acetylhexosaminidase;protein_id=WP_003401295.1;transl_table=11 NZ_KK316784.1 RefSeq gene 286791 287405 . + . ID=gene-AL42_RS06980;Name=AL42_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06980;old_locus_tag=AL42_00249 NZ_KK316784.1 Protein Homology CDS 286791 287405 . + 0 ID=cds-WP_003401297.1;Parent=gene-AL42_RS06980;Dbxref=GenBank:WP_003401297.1;Name=WP_003401297.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214752.1;locus_tag=AL42_RS06980;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003401297.1;transl_table=11 NZ_KK316784.1 RefSeq gene 287467 287700 . + . ID=gene-AL42_RS06985;Name=AL42_RS06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06985;old_locus_tag=AL42_00250 NZ_KK316784.1 Protein Homology CDS 287467 287700 . + 0 ID=cds-WP_003401300.1;Parent=gene-AL42_RS06985;Dbxref=GenBank:WP_003401300.1;Name=WP_003401300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214753.1;locus_tag=AL42_RS06985;product=antitoxin;protein_id=WP_003401300.1;transl_table=11 NZ_KK316784.1 RefSeq gene 287708 288145 . + . ID=gene-AL42_RS06990;Name=AL42_RS06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS06990;old_locus_tag=AL42_00251 NZ_KK316784.1 Protein Homology CDS 287708 288145 . + 0 ID=cds-WP_003900837.1;Parent=gene-AL42_RS06990;Dbxref=GenBank:WP_003900837.1;Name=WP_003900837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214754.1;locus_tag=AL42_RS06990;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003900837.1;transl_table=11 NZ_KK316784.1 RefSeq gene 288175 289017 . - . ID=gene-AL42_RS06995;Name=htdX;gbkey=Gene;gene=htdX;gene_biotype=protein_coding;locus_tag=AL42_RS06995;old_locus_tag=AL42_00252 NZ_KK316784.1 Protein Homology CDS 288175 289017 . - 0 ID=cds-WP_003401305.1;Parent=gene-AL42_RS06995;Dbxref=GenBank:WP_003401305.1;Name=WP_003401305.1;gbkey=CDS;gene=htdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214755.1;locus_tag=AL42_RS06995;product=3-hydroxyacyl-thioester dehydratase HtdX;protein_id=WP_003401305.1;transl_table=11 NZ_KK316784.1 RefSeq gene 289028 290392 . - . ID=gene-AL42_RS07000;Name=AL42_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07000;old_locus_tag=AL42_00253 NZ_KK316784.1 Protein Homology CDS 289028 290392 . - 0 ID=cds-WP_003899869.1;Parent=gene-AL42_RS07000;Dbxref=GenBank:WP_003899869.1;Name=WP_003899869.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214756.1;locus_tag=AL42_RS07000;product=3-oxoacyl-ACP reductase;protein_id=WP_003899869.1;transl_table=11 NZ_KK316784.1 RefSeq gene 290534 291856 . + . ID=gene-AL42_RS07005;Name=AL42_RS07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07005;old_locus_tag=AL42_00254 NZ_KK316784.1 Protein Homology CDS 290534 291856 . + 0 ID=cds-WP_003401309.1;Parent=gene-AL42_RS07005;Dbxref=GenBank:WP_003401309.1;Name=WP_003401309.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214757.1;locus_tag=AL42_RS07005;product=acetyl-CoA C-acetyltransferase;protein_id=WP_003401309.1;transl_table=11 NZ_KK316784.1 RefSeq gene 292162 293997 . - . ID=gene-AL42_RS07010;Name=AL42_RS07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07010;old_locus_tag=AL42_00255 NZ_KK316784.1 Protein Homology CDS 292162 293997 . - 0 ID=cds-WP_003401312.1;Parent=gene-AL42_RS07010;Dbxref=GenBank:WP_003401312.1;Name=WP_003401312.1;Ontology_term=GO:0006631,GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214758.1;locus_tag=AL42_RS07010;product=acyl-CoA dehydrogenase;protein_id=WP_003401312.1;transl_table=11 NZ_KK316784.1 RefSeq gene 294369 294857 . + . ID=gene-AL42_RS07015;Name=AL42_RS07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07015;old_locus_tag=AL42_00256 NZ_KK316784.1 Protein Homology CDS 294369 294857 . + 0 ID=cds-WP_003911074.1;Parent=gene-AL42_RS07015;Dbxref=GenBank:WP_003911074.1;Name=WP_003911074.1;Ontology_term=GO:0010181,GO:0016491,GO:0016646;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,oxidoreductase activity%2C acting on the CH-NH group of donors%2C NAD or NADP as acceptor|0016646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214759.1;locus_tag=AL42_RS07015;product=flavin reductase family protein;protein_id=WP_003911074.1;transl_table=11 NZ_KK316784.1 RefSeq gene 295173 296483 . + . ID=gene-AL42_RS07020;Name=AL42_RS07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07020;old_locus_tag=AL42_00257 NZ_KK316784.1 Protein Homology CDS 295173 296483 . + 0 ID=cds-WP_003401317.1;Parent=gene-AL42_RS07020;Dbxref=GenBank:WP_003401317.1;Name=WP_003401317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214760.1;locus_tag=AL42_RS07020;product=integral membrane protein;protein_id=WP_003401317.1;transl_table=11 NZ_KK316784.1 RefSeq gene 296480 297226 . - . ID=gene-AL42_RS07025;Name=AL42_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07025;old_locus_tag=AL42_00258 NZ_KK316784.1 Protein Homology CDS 296480 297226 . - 0 ID=cds-WP_003401319.1;Parent=gene-AL42_RS07025;Dbxref=GenBank:WP_003401319.1;Name=WP_003401319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214761.1;locus_tag=AL42_RS07025;product=succinate dehydrogenase/fumarate reductase iron-sulfur subunit;protein_id=WP_003401319.1;transl_table=11 NZ_KK316784.1 RefSeq gene 297227 299167 . - . ID=gene-AL42_RS07030;Name=AL42_RS07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07030;old_locus_tag=AL42_00259 NZ_KK316784.1 Protein Homology CDS 297227 299167 . - 0 ID=cds-WP_003401322.1;Parent=gene-AL42_RS07030;Dbxref=GenBank:WP_003401322.1;Name=WP_003401322.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214762.1;locus_tag=AL42_RS07030;product=fumarate reductase/succinate dehydrogenase flavoprotein subunit;protein_id=WP_003401322.1;transl_table=11 NZ_KK316784.1 RefSeq gene 299198 300019 . - . ID=gene-AL42_RS07035;Name=AL42_RS07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07035;old_locus_tag=AL42_00260 NZ_KK316784.1 Protein Homology CDS 299198 300019 . - 0 ID=cds-WP_003401324.1;Parent=gene-AL42_RS07035;Dbxref=GenBank:WP_003401324.1;Name=WP_003401324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214763.1;locus_tag=AL42_RS07035;product=succinate dehydrogenase membrane anchor subunit;protein_id=WP_003401324.1;transl_table=11 NZ_KK316784.1 RefSeq gene 300099 300392 . - . ID=gene-AL42_RS07040;Name=AL42_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07040;old_locus_tag=AL42_00261 NZ_KK316784.1 Protein Homology CDS 300099 300392 . - 0 ID=cds-WP_003401329.1;Parent=gene-AL42_RS07040;Dbxref=GenBank:WP_003401329.1;Name=WP_003401329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214764.1;locus_tag=AL42_RS07040;product=hypothetical protein;protein_id=WP_003401329.1;transl_table=11 NZ_KK316784.1 RefSeq gene 300537 301016 . - . ID=gene-AL42_RS07045;Name=acr2;gbkey=Gene;gene=acr2;gene_biotype=protein_coding;gene_synonym=hsp;locus_tag=AL42_RS07045;old_locus_tag=AL42_00262 NZ_KK316784.1 Protein Homology CDS 300537 301016 . - 0 ID=cds-WP_003900838.1;Parent=gene-AL42_RS07045;Dbxref=GenBank:WP_003900838.1;Name=WP_003900838.1;gbkey=CDS;gene=acr2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214765.1;locus_tag=AL42_RS07045;product=stress-responsive chaperone Acr2;protein_id=WP_003900838.1;transl_table=11 NZ_KK316784.1 RefSeq gene 301230 303791 . + . ID=gene-AL42_RS07050;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=AL42_RS07050;old_locus_tag=AL42_00263 NZ_KK316784.1 Protein Homology CDS 301230 303791 . + 0 ID=cds-WP_003911075.1;Parent=gene-AL42_RS07050;Dbxref=GenBank:WP_003911075.1;Name=WP_003911075.1;Ontology_term=GO:0042128,GO:0008942,GO:0050660,GO:0050661;gbkey=CDS;gene=nirB;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=nitrate assimilation|0042128||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214766.1;locus_tag=AL42_RS07050;product=nitrite reductase large subunit NirB;protein_id=WP_003911075.1;transl_table=11 NZ_KK316784.1 RefSeq gene 303817 304173 . + . ID=gene-AL42_RS07055;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=AL42_RS07055;old_locus_tag=AL42_00264 NZ_KK316784.1 Protein Homology CDS 303817 304173 . + 0 ID=cds-WP_003401341.1;Parent=gene-AL42_RS07055;Dbxref=GenBank:WP_003401341.1;Name=WP_003401341.1;Ontology_term=GO:0008942,GO:0051537;gbkey=CDS;gene=nirD;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214767.1;locus_tag=AL42_RS07055;product=nitrite reductase small subunit NirD;protein_id=WP_003401341.1;transl_table=11 NZ_KK316784.1 RefSeq gene 304189 304713 . - . ID=gene-AL42_RS07060;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=AL42_RS07060;old_locus_tag=AL42_00265 NZ_KK316784.1 Protein Homology CDS 304189 304713 . - 0 ID=cds-WP_003899876.1;Parent=gene-AL42_RS07060;Dbxref=GenBank:WP_003899876.1;Name=WP_003899876.1;Ontology_term=GO:0009236,GO:0000166,GO:0008820,GO:0043752;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,cobinamide phosphate guanylyltransferase activity|0008820||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214768.1;locus_tag=AL42_RS07060;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WP_003899876.1;transl_table=11 NZ_KK316784.1 RefSeq gene 304738 306222 . - . ID=gene-AL42_RS07065;Name=AL42_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07065;old_locus_tag=AL42_00266 NZ_KK316784.1 Protein Homology CDS 304738 306222 . - 0 ID=cds-WP_003899877.1;Parent=gene-AL42_RS07065;Dbxref=GenBank:WP_003899877.1;Name=WP_003899877.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177703.1;locus_tag=AL42_RS07065;product=cobyric acid synthase;protein_id=WP_003899877.1;transl_table=11 NZ_KK316784.1 RefSeq gene 306241 307911 . - . ID=gene-AL42_RS07070;Name=AL42_RS07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07070;old_locus_tag=AL42_00267 NZ_KK316784.1 Protein Homology CDS 306241 307911 . - 0 ID=cds-WP_003401347.1;Parent=gene-AL42_RS07070;Dbxref=GenBank:WP_003401347.1;Name=WP_003401347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177704.1;locus_tag=AL42_RS07070;product=PPE family protein;protein_id=WP_003401347.1;transl_table=11 NZ_KK316784.1 cmsearch riboswitch 308050 308231 . - . ID=id-NZ_KK316784.1:308050..308231;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_KK316784.1 RefSeq gene 308658 309113 . - . ID=gene-AL42_RS07080;Name=AL42_RS07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07080;old_locus_tag=AL42_00269 NZ_KK316784.1 Protein Homology CDS 308658 309113 . - 0 ID=cds-WP_003401352.1;Parent=gene-AL42_RS07080;Dbxref=GenBank:WP_003401352.1;Name=WP_003401352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214772.1;locus_tag=AL42_RS07080;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003401352.1;transl_table=11 NZ_KK316784.1 RefSeq gene 309138 309881 . - . ID=gene-AL42_RS07085;Name=AL42_RS07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07085;old_locus_tag=AL42_00270 NZ_KK316784.1 Protein Homology CDS 309138 309881 . - 0 ID=cds-WP_003401354.1;Parent=gene-AL42_RS07085;Dbxref=GenBank:WP_003401354.1;Name=WP_003401354.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214773.1;locus_tag=AL42_RS07085;product=sirohydrochlorin chelatase;protein_id=WP_003401354.1;transl_table=11 NZ_KK316784.1 RefSeq gene 309878 311023 . - . ID=gene-AL42_RS07090;Name=AL42_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07090;old_locus_tag=AL42_00271 NZ_KK316784.1 Protein Homology CDS 309878 311023 . - 0 ID=cds-WP_003401357.1;Parent=gene-AL42_RS07090;Dbxref=GenBank:WP_003401357.1;Name=WP_003401357.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214774.1;locus_tag=AL42_RS07090;product=uroporphyrinogen-III synthase;protein_id=WP_003401357.1;transl_table=11 NZ_KK316784.1 RefSeq gene 311123 312532 . - . ID=gene-AL42_RS07095;Name=AL42_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07095;old_locus_tag=AL42_00272 NZ_KK316784.1 Protein Homology CDS 311123 312532 . - 0 ID=cds-WP_003401360.1;Parent=gene-AL42_RS07095;Dbxref=GenBank:WP_003401360.1;Name=WP_003401360.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214775.1;locus_tag=AL42_RS07095;product=MFS transporter;protein_id=WP_003401360.1;transl_table=11 NZ_KK316784.1 RefSeq gene 312673 313218 . - . ID=gene-AL42_RS07100;Name=aac(2')-Ic;gbkey=Gene;gene=aac(2')-Ic;gene_biotype=protein_coding;locus_tag=AL42_RS07100;old_locus_tag=AL42_00273 NZ_KK316784.1 Protein Homology CDS 312673 313218 . - 0 ID=cds-WP_003899880.1;Parent=gene-AL42_RS07100;Dbxref=GenBank:WP_003899880.1;Name=WP_003899880.1;gbkey=CDS;gene=aac(2')-Ic;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899880.1;locus_tag=AL42_RS07100;product=aminoglycoside N-acetyltransferase AAC(2')-Ic;protein_id=WP_003899880.1;transl_table=11 NZ_KK316784.1 RefSeq gene 313228 314130 . - . ID=gene-AL42_RS07105;Name=AL42_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07105;old_locus_tag=AL42_00274 NZ_KK316784.1 Protein Homology CDS 313228 314130 . - 0 ID=cds-WP_003401367.1;Parent=gene-AL42_RS07105;Dbxref=GenBank:WP_003401367.1;Name=WP_003401367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214777.1;locus_tag=AL42_RS07105;product=5-oxoprolinase/urea amidolyase family protein;protein_id=WP_003401367.1;transl_table=11 NZ_KK316784.1 RefSeq gene 314147 314779 . - . ID=gene-AL42_RS07110;Name=AL42_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07110;old_locus_tag=AL42_00275 NZ_KK316784.1 Protein Homology CDS 314147 314779 . - 0 ID=cds-WP_003401370.1;Parent=gene-AL42_RS07110;Dbxref=GenBank:WP_003401370.1;Name=WP_003401370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214778.1;locus_tag=AL42_RS07110;product=5-oxoprolinase subunit B family protein;protein_id=WP_003401370.1;transl_table=11 NZ_KK316784.1 RefSeq gene 314875 315867 . - . ID=gene-AL42_RS07115;Name=AL42_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07115;old_locus_tag=AL42_00276 NZ_KK316784.1 Protein Homology CDS 314875 315867 . - 0 ID=cds-WP_003401373.1;Parent=gene-AL42_RS07115;Dbxref=GenBank:WP_003401373.1;Name=WP_003401373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177705.1;locus_tag=AL42_RS07115;product=ABC transporter substrate-binding protein;protein_id=WP_003401373.1;transl_table=11 NZ_KK316784.1 RefSeq gene 315889 319518 . - . ID=gene-AL42_RS07120;Name=oplA;gbkey=Gene;gene=oplA;gene_biotype=protein_coding;locus_tag=AL42_RS07120;old_locus_tag=AL42_00277 NZ_KK316784.1 Protein Homology CDS 315889 319518 . - 0 ID=cds-WP_003899883.1;Parent=gene-AL42_RS07120;Dbxref=GenBank:WP_003899883.1;Name=WP_003899883.1;Ontology_term=GO:0003824;gbkey=CDS;gene=oplA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214780.1;locus_tag=AL42_RS07120;product=hydantoinase B/oxoprolinase family protein;protein_id=WP_003899883.1;transl_table=11 NZ_KK316784.1 RefSeq gene 319695 321086 . + . ID=gene-AL42_RS07125;Name=narU;gbkey=Gene;gene=narU;gene_biotype=protein_coding;locus_tag=AL42_RS07125;old_locus_tag=AL42_00278 NZ_KK316784.1 Protein Homology CDS 319695 321086 . + 0 ID=cds-WP_003401380.1;Parent=gene-AL42_RS07125;Dbxref=GenBank:WP_003401380.1;Name=WP_003401380.1;Ontology_term=GO:0015706,GO:0015707,GO:0015112,GO:0015113,GO:0016020;gbkey=CDS;gene=narU;go_component=membrane|0016020||IEA;go_function=nitrate transmembrane transporter activity|0015112||IEA,nitrite transmembrane transporter activity|0015113||IEA;go_process=nitrate transmembrane transport|0015706||IEA,nitrite transport|0015707||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214781.1;locus_tag=AL42_RS07125;product=NarK family nitrate/nitrite MFS transporter;protein_id=WP_003401380.1;transl_table=11 NZ_KK316784.1 RefSeq gene 321128 321385 . - . ID=gene-AL42_RS27090;Name=AL42_RS27090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27090 NZ_KK316784.1 Protein Homology CDS 321128 321385 . - 0 ID=cds-WP_003911137.1;Parent=gene-AL42_RS27090;Dbxref=GenBank:WP_003911137.1;Name=WP_003911137.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: protein motif:HMM:TIGR01552.1;locus_tag=AL42_RS27090;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_003911137.1;transl_table=11 NZ_KK316784.1 RefSeq gene 321382 321507 . - . ID=gene-AL42_RS27420;Name=AL42_RS27420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27420 NZ_KK316784.1 Protein Homology CDS 321382 321507 . - 0 ID=cds-WP_003918044.1;Parent=gene-AL42_RS27420;Dbxref=GenBank:WP_003918044.1;Name=WP_003918044.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: protein motif:HMM:NF016876.6;locus_tag=AL42_RS27420;product=type II toxin-antitoxin system RelE family toxin;protein_id=WP_003918044.1;transl_table=11 NZ_KK316784.1 RefSeq gene 321702 322895 . - . ID=gene-AL42_RS07135;Name=AL42_RS07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07135;old_locus_tag=AL42_00280 NZ_KK316784.1 Protein Homology CDS 321702 322895 . - 0 ID=cds-WP_003401386.1;Parent=gene-AL42_RS07135;Dbxref=GenBank:WP_003401386.1;Name=WP_003401386.1;Ontology_term=GO:0006281;gbkey=CDS;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214783.1;locus_tag=AL42_RS07135;product=DNA polymerase domain-containing protein;protein_id=WP_003401386.1;transl_table=11 NZ_KK316784.1 RefSeq gene 322931 324613 . + . ID=gene-AL42_RS07140;Name=fadD2;gbkey=Gene;gene=fadD2;gene_biotype=protein_coding;locus_tag=AL42_RS07140;old_locus_tag=AL42_00281 NZ_KK316784.1 Protein Homology CDS 322931 324613 . + 0 ID=cds-WP_003899884.1;Parent=gene-AL42_RS07140;Dbxref=GenBank:WP_003899884.1;Name=WP_003899884.1;gbkey=CDS;gene=fadD2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214784.1;locus_tag=AL42_RS07140;product=long-chain-fatty-acid--CoA ligase FadD2;protein_id=WP_003899884.1;transl_table=11 NZ_KK316784.1 RefSeq gene 324630 326825 . - . ID=gene-AL42_RS07145;Name=AL42_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07145;old_locus_tag=AL42_00282 NZ_KK316784.1 Protein Homology CDS 324630 326825 . - 0 ID=cds-WP_003401392.1;Parent=gene-AL42_RS07145;Dbxref=GenBank:WP_003401392.1;Name=WP_003401392.1;Ontology_term=GO:0016627,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214785.1;locus_tag=AL42_RS07145;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003401392.1;transl_table=11 NZ_KK316784.1 RefSeq gene 326939 328072 . - . ID=gene-AL42_RS07150;Name=AL42_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07150;old_locus_tag=AL42_00283 NZ_KK316784.1 Protein Homology CDS 326939 328072 . - 0 ID=cds-WP_003401394.1;Parent=gene-AL42_RS07150;Dbxref=GenBank:WP_003401394.1;Name=WP_003401394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214786.1;locus_tag=AL42_RS07150;product=alpha/beta fold hydrolase domain-containing protein;protein_id=WP_003401394.1;transl_table=11 NZ_KK316784.1 RefSeq gene 328069 328689 . - . ID=gene-AL42_RS07155;Name=AL42_RS07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07155;old_locus_tag=AL42_00284 NZ_KK316784.1 Protein Homology CDS 328069 328689 . - 0 ID=cds-WP_003401397.1;Parent=gene-AL42_RS07155;Dbxref=GenBank:WP_003401397.1;Name=WP_003401397.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214787.1;locus_tag=AL42_RS07155;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003401397.1;transl_table=11 NZ_KK316784.1 RefSeq gene 328786 329367 . + . ID=gene-AL42_RS07160;Name=AL42_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07160;old_locus_tag=AL42_00285 NZ_KK316784.1 Protein Homology CDS 328786 329367 . + 0 ID=cds-WP_003401399.1;Parent=gene-AL42_RS07160;Dbxref=GenBank:WP_003401399.1;Name=WP_003401399.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214788.1;locus_tag=AL42_RS07160;product=VOC family protein;protein_id=WP_003401399.1;transl_table=11 NZ_KK316784.1 RefSeq gene 329297 330022 . - . ID=gene-AL42_RS07165;Name=AL42_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07165;old_locus_tag=AL42_00286 NZ_KK316784.1 Protein Homology CDS 329297 330022 . - 0 ID=cds-WP_003899886.1;Parent=gene-AL42_RS07165;Dbxref=GenBank:WP_003899886.1;Name=WP_003899886.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177706.1;locus_tag=AL42_RS07165;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003899886.1;transl_table=11 NZ_KK316784.1 RefSeq gene 330112 331032 . + . ID=gene-AL42_RS07170;Name=AL42_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07170;old_locus_tag=AL42_00287 NZ_KK316784.1 Protein Homology CDS 330112 331032 . + 0 ID=cds-WP_003401404.1;Parent=gene-AL42_RS07170;Dbxref=GenBank:WP_003401404.1;Name=WP_003401404.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214790.1;locus_tag=AL42_RS07170;product=oxygenase MpaB family protein;protein_id=WP_003401404.1;transl_table=11 NZ_KK316784.1 RefSeq gene 331072 331500 . - . ID=gene-AL42_RS07175;Name=AL42_RS07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07175;old_locus_tag=AL42_00288 NZ_KK316784.1 Protein Homology CDS 331072 331500 . - 0 ID=cds-WP_003401406.1;Parent=gene-AL42_RS07175;Dbxref=GenBank:WP_003401406.1;Name=WP_003401406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214791.1;locus_tag=AL42_RS07175;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003401406.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 331524 331781 . - . ID=gene-AL42_RS07180;Name=vapB25;gbkey=Gene;gene=vapB25;gene_biotype=pseudogene;locus_tag=AL42_RS07180;old_locus_tag=AL42_00289;pseudo=true NZ_KK316784.1 Protein Homology CDS 331524 331781 . - 0 ID=cds-AL42_RS07180;Parent=gene-AL42_RS07180;Note=internal stop;gbkey=CDS;gene=vapB25;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215262.1;locus_tag=AL42_RS07180;product=type II toxin-antitoxin system antitoxin vapB25;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 331801 334608 . - . ID=gene-AL42_RS07185;Name=AL42_RS07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07185;old_locus_tag=AL42_00290 NZ_KK316784.1 Protein Homology CDS 331801 334608 . - 0 ID=cds-WP_025202582.1;Parent=gene-AL42_RS07185;Dbxref=GenBank:WP_025202582.1;Name=WP_025202582.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177707.1;locus_tag=AL42_RS07185;product=PE family protein;protein_id=WP_025202582.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 334858 337580 . - . ID=gene-AL42_RS07190;Name=AL42_RS07190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS07190;old_locus_tag=AL42_00291;partial=true;pseudo=true;start_range=.,334858 NZ_KK316784.1 Protein Homology CDS 334858 337580 . - 0 ID=cds-AL42_RS07190;Parent=gene-AL42_RS07190;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177707.1;locus_tag=AL42_RS07190;partial=true;product=PE family protein;pseudo=true;start_range=.,334858;transl_table=11 NZ_KK316784.1 RefSeq gene 337871 339481 . + . ID=gene-AL42_RS07195;Name=AL42_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07195;old_locus_tag=AL42_00292 NZ_KK316784.1 Protein Homology CDS 337871 339481 . + 0 ID=cds-WP_003902643.1;Parent=gene-AL42_RS07195;Dbxref=GenBank:WP_003902643.1;Name=WP_003902643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177709.1;locus_tag=AL42_RS07195;product=PPE family protein;protein_id=WP_003902643.1;transl_table=11 NZ_KK316784.1 RefSeq gene 339505 340413 . + . ID=gene-AL42_RS07200;Name=AL42_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07200;old_locus_tag=AL42_00293 NZ_KK316784.1 Protein Homology CDS 339505 340413 . + 0 ID=cds-WP_003401448.1;Parent=gene-AL42_RS07200;Dbxref=GenBank:WP_003401448.1;Name=WP_003401448.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214795.1;locus_tag=AL42_RS07200;product=class I SAM-dependent methyltransferase;protein_id=WP_003401448.1;transl_table=11 NZ_KK316784.1 RefSeq gene 340670 342532 . + . ID=gene-AL42_RS07205;Name=eccA3;gbkey=Gene;gene=eccA3;gene_biotype=protein_coding;locus_tag=AL42_RS07205;old_locus_tag=AL42_00294 NZ_KK316784.1 Protein Homology CDS 340670 342532 . + 0 ID=cds-WP_003911145.1;Parent=gene-AL42_RS07205;Dbxref=GenBank:WP_003911145.1;Name=WP_003911145.1;gbkey=CDS;gene=eccA3;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911145.1;locus_tag=AL42_RS07205;product=type VII secretion system ESX-3 AAA family ATPase EccA3;protein_id=WP_003911145.1;transl_table=11 NZ_KK316784.1 RefSeq gene 342529 344145 . + . ID=gene-AL42_RS07210;Name=eccB3;gbkey=Gene;gene=eccB3;gene_biotype=protein_coding;locus_tag=AL42_RS07210;old_locus_tag=AL42_00295 NZ_KK316784.1 Protein Homology CDS 342529 344145 . + 0 ID=cds-WP_003401472.1;Parent=gene-AL42_RS07210;Dbxref=GenBank:WP_003401472.1;Name=WP_003401472.1;gbkey=CDS;gene=eccB3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214797.1;locus_tag=AL42_RS07210;product=type VII secretion system ESX-3 subunit EccB3;protein_id=WP_003401472.1;transl_table=11 NZ_KK316784.1 RefSeq gene 344142 348134 . + . ID=gene-AL42_RS07215;Name=eccC3;gbkey=Gene;gene=eccC3;gene_biotype=protein_coding;locus_tag=AL42_RS07215;old_locus_tag=AL42_00296 NZ_KK316784.1 Protein Homology CDS 344142 348134 . + 0 ID=cds-WP_003401478.1;Parent=gene-AL42_RS07215;Dbxref=GenBank:WP_003401478.1;Name=WP_003401478.1;gbkey=CDS;gene=eccC3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214798.1;locus_tag=AL42_RS07215;product=type VII secretion system ESX-3 FtsK/SpoIIIE family ATPase EccC3;protein_id=WP_003401478.1;transl_table=11 NZ_KK316784.1 RefSeq gene 348131 348439 . + . ID=gene-AL42_RS07220;Name=AL42_RS07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07220;old_locus_tag=AL42_00297 NZ_KK316784.1 Protein Homology CDS 348131 348439 . + 0 ID=cds-WP_003401485.1;Parent=gene-AL42_RS07220;Dbxref=GenBank:WP_003401485.1;Name=WP_003401485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177710.1;locus_tag=AL42_RS07220;product=type VII secretion system ESX-3 target PE5;protein_id=WP_003401485.1;transl_table=11 NZ_KK316784.1 RefSeq gene 348442 349983 . + . ID=gene-AL42_RS07225;Name=AL42_RS07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07225;old_locus_tag=AL42_00298 NZ_KK316784.1 Protein Homology CDS 348442 349983 . + 0 ID=cds-WP_003401488.1;Parent=gene-AL42_RS07225;Dbxref=GenBank:WP_003401488.1;Name=WP_003401488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177711.1;locus_tag=AL42_RS07225;product=type VII secretion system ESX-3 target PPE4;protein_id=WP_003401488.1;transl_table=11 NZ_KK316784.1 RefSeq gene 350032 350325 . + . ID=gene-AL42_RS07230;Name=esxG;gbkey=Gene;gene=esxG;gene_biotype=protein_coding;locus_tag=AL42_RS07230;old_locus_tag=AL42_00299 NZ_KK316784.1 Protein Homology CDS 350032 350325 . + 0 ID=cds-WP_003401503.1;Parent=gene-AL42_RS07230;Dbxref=GenBank:WP_003401503.1;Name=WP_003401503.1;gbkey=CDS;gene=esxG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214801.1;locus_tag=AL42_RS07230;product=type VII secretion system protein EsxG;protein_id=WP_003401503.1;transl_table=11 NZ_KK316784.1 RefSeq gene 350355 350645 . + . ID=gene-AL42_RS07235;Name=esxH;gbkey=Gene;gene=esxH;gene_biotype=protein_coding;locus_tag=AL42_RS07235;old_locus_tag=AL42_00300 NZ_KK316784.1 Protein Homology CDS 350355 350645 . + 0 ID=cds-WP_003401514.1;Parent=gene-AL42_RS07235;Dbxref=GenBank:WP_003401514.1;Name=WP_003401514.1;gbkey=CDS;gene=esxH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214802.1;locus_tag=AL42_RS07235;product=type VII secretion system effector EsxH;protein_id=WP_003401514.1;transl_table=11 NZ_KK316784.1 RefSeq gene 350656 351543 . + . ID=gene-AL42_RS07240;Name=espG3;gbkey=Gene;gene=espG3;gene_biotype=protein_coding;locus_tag=AL42_RS07240;old_locus_tag=AL42_00301 NZ_KK316784.1 Protein Homology CDS 350656 351543 . + 0 ID=cds-WP_003401521.1;Parent=gene-AL42_RS07240;Dbxref=GenBank:WP_003401521.1;Name=WP_003401521.1;gbkey=CDS;gene=espG3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214803.1;locus_tag=AL42_RS07240;product=type VII secretion system ESX-3 associated protein EspG3;protein_id=WP_003401521.1;transl_table=11 NZ_KK316784.1 RefSeq gene 351590 353008 . + . ID=gene-AL42_RS07245;Name=eccD3;gbkey=Gene;gene=eccD3;gene_biotype=protein_coding;locus_tag=AL42_RS07245;old_locus_tag=AL42_00302 NZ_KK316784.1 Protein Homology CDS 351590 353008 . + 0 ID=cds-WP_003902645.1;Parent=gene-AL42_RS07245;Dbxref=GenBank:WP_003902645.1;Name=WP_003902645.1;gbkey=CDS;gene=eccD3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214804.1;locus_tag=AL42_RS07245;product=type VII secretion system ESX-3 subunit EccD3;protein_id=WP_003902645.1;transl_table=11 NZ_KK316784.1 RefSeq gene 353005 354390 . + . ID=gene-AL42_RS07250;Name=mycP3;gbkey=Gene;gene=mycP3;gene_biotype=protein_coding;locus_tag=AL42_RS07250;old_locus_tag=AL42_00303 NZ_KK316784.1 Protein Homology CDS 353005 354390 . + 0 ID=cds-WP_003401528.1;Parent=gene-AL42_RS07250;Dbxref=GenBank:WP_003401528.1;Name=WP_003401528.1;gbkey=CDS;gene=mycP3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214805.1;locus_tag=AL42_RS07250;product=type VII secretion system ESX-3 serine protease mycosin MycP3;protein_id=WP_003401528.1;transl_table=11 NZ_KK316784.1 RefSeq gene 354387 355382 . + . ID=gene-AL42_RS07255;Name=eccE3;gbkey=Gene;gene=eccE3;gene_biotype=protein_coding;locus_tag=AL42_RS07255;old_locus_tag=AL42_00304 NZ_KK316784.1 Protein Homology CDS 354387 355382 . + 0 ID=cds-WP_003401533.1;Parent=gene-AL42_RS07255;Dbxref=GenBank:WP_003401533.1;Name=WP_003401533.1;gbkey=CDS;gene=eccE3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214806.1;locus_tag=AL42_RS07255;product=type VII secretion system ESX-3 subunit EccE3;protein_id=WP_003401533.1;transl_table=11 NZ_KK316784.1 RefSeq gene 355369 356571 . - . ID=gene-AL42_RS07260;Name=AL42_RS07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07260;old_locus_tag=AL42_00305 NZ_KK316784.1 Protein Homology CDS 355369 356571 . - 0 ID=cds-WP_003898396.1;Parent=gene-AL42_RS07260;Dbxref=GenBank:WP_003898396.1;Name=WP_003898396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214807.1;locus_tag=AL42_RS07260;product=alpha/beta fold hydrolase;protein_id=WP_003898396.1;transl_table=11 NZ_KK316784.1 RefSeq gene 356678 357463 . + . ID=gene-AL42_RS07265;Name=tam;gbkey=Gene;gene=tam;gene_biotype=protein_coding;locus_tag=AL42_RS07265;old_locus_tag=AL42_00306 NZ_KK316784.1 Protein Homology CDS 356678 357463 . + 0 ID=cds-WP_003401538.1;Parent=gene-AL42_RS07265;Dbxref=GenBank:WP_003401538.1;Name=WP_003401538.1;Ontology_term=GO:0030798;gbkey=CDS;gene=tam;go_function=trans-aconitate 2-methyltransferase activity|0030798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214808.1;locus_tag=AL42_RS07265;product=trans-aconitate 2-methyltransferase;protein_id=WP_003401538.1;transl_table=11 NZ_KK316784.1 RefSeq gene 357452 358255 . - . ID=gene-AL42_RS07270;Name=stf0;gbkey=Gene;gene=stf0;gene_biotype=protein_coding;locus_tag=AL42_RS07270;old_locus_tag=AL42_00307 NZ_KK316784.1 Protein Homology CDS 357452 358255 . - 0 ID=cds-WP_003401540.1;Parent=gene-AL42_RS07270;Dbxref=GenBank:WP_003401540.1;Name=WP_003401540.1;Ontology_term=GO:0016740;gbkey=CDS;gene=stf0;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214809.1;locus_tag=AL42_RS07270;product=trehalose 2-sulfotransferase;protein_id=WP_003401540.1;transl_table=11 NZ_KK316784.1 RefSeq gene 358265 359662 . - . ID=gene-AL42_RS07275;Name=AL42_RS07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07275;old_locus_tag=AL42_00308 NZ_KK316784.1 Protein Homology CDS 358265 359662 . - 0 ID=cds-WP_003401544.1;Parent=gene-AL42_RS07275;Dbxref=GenBank:WP_003401544.1;Name=WP_003401544.1;Ontology_term=GO:0008484,GO:0046872;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177712.1;locus_tag=AL42_RS07275;product=sulfatase family protein;protein_id=WP_003401544.1;transl_table=11 NZ_KK316784.1 RefSeq gene 359841 361616 . + . ID=gene-AL42_RS07280;Name=AL42_RS07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07280;old_locus_tag=AL42_00309 NZ_KK316784.1 Protein Homology CDS 359841 361616 . + 0 ID=cds-WP_010886074.1;Parent=gene-AL42_RS07280;Dbxref=GenBank:WP_010886074.1;Name=WP_010886074.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177713.1;locus_tag=AL42_RS07280;product=PE family protein;protein_id=WP_010886074.1;transl_table=11 NZ_KK316784.1 RefSeq gene 361759 361986 . + . ID=gene-AL42_RS07285;Name=AL42_RS07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07285;old_locus_tag=AL42_00310 NZ_KK316784.1 Protein Homology CDS 361759 361986 . + 0 ID=cds-WP_003401555.1;Parent=gene-AL42_RS07285;Dbxref=GenBank:WP_003401555.1;Name=WP_003401555.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214812.1;locus_tag=AL42_RS07285;product=ribbon-helix-helix protein%2C CopG family;protein_id=WP_003401555.1;transl_table=11 NZ_KK316784.1 RefSeq gene 361983 362285 . + . ID=gene-AL42_RS07290;Name=AL42_RS07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07290;old_locus_tag=AL42_00311 NZ_KK316784.1 Protein Homology CDS 361983 362285 . + 0 ID=cds-WP_003401560.1;Parent=gene-AL42_RS07290;Dbxref=GenBank:WP_003401560.1;Name=WP_003401560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214813.1;locus_tag=AL42_RS07290;product=toxin-antitoxin system toxin;protein_id=WP_003401560.1;transl_table=11 NZ_KK316784.1 RefSeq gene 362333 362554 . + . ID=gene-AL42_RS07295;Name=vapB2;gbkey=Gene;gene=vapB2;gene_biotype=protein_coding;locus_tag=AL42_RS07295;old_locus_tag=AL42_00312 NZ_KK316784.1 Protein Homology CDS 362333 362554 . + 0 ID=cds-WP_003401563.1;Parent=gene-AL42_RS07295;Dbxref=GenBank:WP_003401563.1;Name=WP_003401563.1;gbkey=CDS;gene=vapB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214814.1;locus_tag=AL42_RS07295;product=type II toxin-antitoxin system antitoxin VapB2;protein_id=WP_003401563.1;transl_table=11 NZ_KK316784.1 RefSeq gene 362551 362976 . + . ID=gene-AL42_RS07300;Name=AL42_RS07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07300;old_locus_tag=AL42_00313 NZ_KK316784.1 Protein Homology CDS 362551 362976 . + 0 ID=cds-WP_003401566.1;Parent=gene-AL42_RS07300;Dbxref=GenBank:WP_003401566.1;Name=WP_003401566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214815.1;locus_tag=AL42_RS07300;product=PIN domain nuclease;protein_id=WP_003401566.1;transl_table=11 NZ_KK316784.1 RefSeq gene 363112 363744 . + . ID=gene-AL42_RS07305;Name=AL42_RS07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07305;old_locus_tag=AL42_00314 NZ_KK316784.1 Protein Homology CDS 363112 363744 . + 0 ID=cds-WP_003905275.1;Parent=gene-AL42_RS07305;Dbxref=GenBank:WP_003905275.1;Name=WP_003905275.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214816.1;locus_tag=AL42_RS07305;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003905275.1;transl_table=11 NZ_KK316784.1 RefSeq gene 363741 364649 . + . ID=gene-AL42_RS07310;Name=AL42_RS07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07310;old_locus_tag=AL42_00315 NZ_KK316784.1 Protein Homology CDS 363741 364649 . + 0 ID=cds-WP_003900117.1;Parent=gene-AL42_RS07310;Dbxref=GenBank:WP_003900117.1;Name=WP_003900117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214817.1;locus_tag=AL42_RS07310;product=protochlorophyllide reductase;protein_id=WP_003900117.1;transl_table=11 NZ_KK316784.1 RefSeq gene 364657 374202 . - . ID=gene-AL42_RS0104185;Name=AL42_RS0104185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0104185;old_locus_tag=AL42_00316 NZ_KK316784.1 Protein Homology CDS 364657 374202 . - 0 ID=cds-WP_003911082.1;Parent=gene-AL42_RS0104185;Dbxref=GenBank:WP_003911082.1;Name=WP_003911082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003913099.1;locus_tag=AL42_RS0104185;product=PPE domain-containing protein;protein_id=WP_003911082.1;transl_table=11 NZ_KK316784.1 RefSeq gene 374405 375076 . + . ID=gene-AL42_RS07315;Name=bluB;gbkey=Gene;gene=bluB;gene_biotype=protein_coding;locus_tag=AL42_RS07315;old_locus_tag=AL42_00318 NZ_KK316784.1 Protein Homology CDS 374405 375076 . + 0 ID=cds-WP_003401584.1;Parent=gene-AL42_RS07315;Dbxref=GenBank:WP_003401584.1;Name=WP_003401584.1;Ontology_term=GO:0009236,GO:0032363,GO:0016722;gbkey=CDS;gene=bluB;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;go_process=cobalamin biosynthetic process|0009236||IEA,FMN catabolic process|0032363||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214820.1;locus_tag=AL42_RS07315;product=5%2C6-dimethylbenzimidazole synthase;protein_id=WP_003401584.1;transl_table=11 NZ_KK316784.1 RefSeq gene 375064 375546 . - . ID=gene-AL42_RS07320;Name=AL42_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07320;old_locus_tag=AL42_00319 NZ_KK316784.1 Protein Homology CDS 375064 375546 . - 0 ID=cds-WP_003401589.1;Parent=gene-AL42_RS07320;Dbxref=GenBank:WP_003401589.1;Name=WP_003401589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214821.1;locus_tag=AL42_RS07320;product=hypothetical protein;protein_id=WP_003401589.1;transl_table=11 NZ_KK316784.1 RefSeq gene 375604 376320 . + . ID=gene-AL42_RS07325;Name=AL42_RS07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07325;old_locus_tag=AL42_00320 NZ_KK316784.1 Protein Homology CDS 375604 376320 . + 0 ID=cds-WP_003401594.1;Parent=gene-AL42_RS07325;Dbxref=GenBank:WP_003401594.1;Name=WP_003401594.1;Ontology_term=GO:0006629,GO:1901137,GO:0016791,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphatase activity|0016791||IEA;go_process=lipid metabolic process|0006629||IEA,carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214822.1;locus_tag=AL42_RS07325;product=phosphatase PAP2 family protein;protein_id=WP_003401594.1;transl_table=11 NZ_KK316784.1 RefSeq gene 376422 377078 . + . ID=gene-AL42_RS07330;Name=AL42_RS07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07330;old_locus_tag=AL42_00321 NZ_KK316784.1 Protein Homology CDS 376422 377078 . + 0 ID=cds-WP_003401597.1;Parent=gene-AL42_RS07330;Dbxref=GenBank:WP_003401597.1;Name=WP_003401597.1;Ontology_term=GO:0018104,GO:0071972;gbkey=CDS;go_function=peptidoglycan L%2CD-transpeptidase activity|0071972||IEA;go_process=peptidoglycan-protein cross-linking|0018104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214823.1;locus_tag=AL42_RS07330;product=L%2CD-transpeptidase family protein;protein_id=WP_003401597.1;transl_table=11 NZ_KK316784.1 RefSeq gene 377148 377639 . - . ID=gene-AL42_RS07335;Name=AL42_RS07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07335;old_locus_tag=AL42_00322 NZ_KK316784.1 Protein Homology CDS 377148 377639 . - 0 ID=cds-WP_003401601.1;Parent=gene-AL42_RS07335;Dbxref=GenBank:WP_003401601.1;Name=WP_003401601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214824.1;locus_tag=AL42_RS07335;product=nuclear transport factor 2 family protein;protein_id=WP_003401601.1;transl_table=11 NZ_KK316784.1 RefSeq gene 377663 378892 . + . ID=gene-AL42_RS07340;Name=AL42_RS07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07340;old_locus_tag=AL42_00323 NZ_KK316784.1 Protein Homology CDS 377663 378892 . + 0 ID=cds-WP_003902650.1;Parent=gene-AL42_RS07340;Dbxref=GenBank:WP_003902650.1;Name=WP_003902650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214825.1;locus_tag=AL42_RS07340;product=hypothetical protein;protein_id=WP_003902650.1;transl_table=11 NZ_KK316784.1 RefSeq gene 379047 380909 . + . ID=gene-AL42_RS07345;Name=AL42_RS07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07345;old_locus_tag=AL42_00324 NZ_KK316784.1 Protein Homology CDS 379047 380909 . + 0 ID=cds-WP_003900119.1;Parent=gene-AL42_RS07345;Dbxref=GenBank:WP_003900119.1;Name=WP_003900119.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214826.1;locus_tag=AL42_RS07345;product=Hsp70 family protein;protein_id=WP_003900119.1;transl_table=11 NZ_KK316784.1 RefSeq gene 380981 381367 . + . ID=gene-AL42_RS07350;Name=AL42_RS07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07350;old_locus_tag=AL42_00325 NZ_KK316784.1 Protein Homology CDS 380981 381367 . + 0 ID=cds-WP_003401613.1;Parent=gene-AL42_RS07350;Dbxref=GenBank:WP_003401613.1;Name=WP_003401613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214827.1;locus_tag=AL42_RS07350;product=hypothetical protein;protein_id=WP_003401613.1;transl_table=11 NZ_KK316784.1 RefSeq gene 381370 382005 . - . ID=gene-AL42_RS07355;Name=AL42_RS07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07355;old_locus_tag=AL42_00326 NZ_KK316784.1 Protein Homology CDS 381370 382005 . - 0 ID=cds-WP_003902950.1;Parent=gene-AL42_RS07355;Dbxref=GenBank:WP_003902950.1;Name=WP_003902950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003873918.1;locus_tag=AL42_RS07355;product=DUF3060 domain-containing protein;protein_id=WP_003902950.1;transl_table=11 NZ_KK316784.1 RefSeq gene 382093 382977 . + . ID=gene-AL42_RS07360;Name=AL42_RS07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07360;old_locus_tag=AL42_00327 NZ_KK316784.1 Protein Homology CDS 382093 382977 . + 0 ID=cds-WP_003905279.1;Parent=gene-AL42_RS07360;Dbxref=GenBank:WP_003905279.1;Name=WP_003905279.1;Ontology_term=GO:0005975,GO:0004553,GO:0030246;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214829.1;locus_tag=AL42_RS07360;product=glycoside hydrolase family 16 protein;protein_id=WP_003905279.1;transl_table=11 NZ_KK316784.1 RefSeq gene 383026 383640 . + . ID=gene-AL42_RS07365;Name=AL42_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07365;old_locus_tag=AL42_00328 NZ_KK316784.1 Protein Homology CDS 383026 383640 . + 0 ID=cds-WP_003401623.1;Parent=gene-AL42_RS07365;Dbxref=GenBank:WP_003401623.1;Name=WP_003401623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214830.1;locus_tag=AL42_RS07365;product=muconolactone Delta-isomerase family protein;protein_id=WP_003401623.1;transl_table=11 NZ_KK316784.1 RefSeq gene 383664 384434 . - . ID=gene-AL42_RS07370;Name=AL42_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07370;old_locus_tag=AL42_00329 NZ_KK316784.1 Protein Homology CDS 383664 384434 . - 0 ID=cds-WP_003401625.1;Parent=gene-AL42_RS07370;Dbxref=GenBank:WP_003401625.1;Name=WP_003401625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214831.1;locus_tag=AL42_RS07370;product=glycerophosphodiester phosphodiesterase family protein;protein_id=WP_003401625.1;transl_table=11 NZ_KK316784.1 RefSeq gene 384695 384765 . - . ID=gene-AL42_RS07375;Name=AL42_RS07375;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL42_RS07375;old_locus_tag=AL42_00330 NZ_KK316784.1 tRNAscan-SE tRNA 384695 384765 . - . ID=rna-AL42_RS07375;Parent=gene-AL42_RS07375;anticodon=(pos:complement(384731..384733));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS07375;product=tRNA-Gly NZ_KK316784.1 tRNAscan-SE exon 384695 384765 . - . ID=exon-AL42_RS07375-1;Parent=rna-AL42_RS07375;anticodon=(pos:complement(384731..384733));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS07375;product=tRNA-Gly NZ_KK316784.1 RefSeq gene 384796 385590 . - . ID=gene-AL42_RS07380;Name=AL42_RS07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07380;old_locus_tag=AL42_00331 NZ_KK316784.1 Protein Homology CDS 384796 385590 . - 0 ID=cds-WP_003401627.1;Parent=gene-AL42_RS07380;Dbxref=GenBank:WP_003401627.1;Name=WP_003401627.1;Ontology_term=GO:0030001,GO:0055085,GO:0046873;gbkey=CDS;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177716.1;locus_tag=AL42_RS07380;product=ZIP family metal transporter;protein_id=WP_003401627.1;transl_table=11 NZ_KK316784.1 RefSeq gene 385639 386307 . + . ID=gene-AL42_RS07385;Name=pcp;gbkey=Gene;gene=pcp;gene_biotype=protein_coding;locus_tag=AL42_RS07385;old_locus_tag=AL42_00332 NZ_KK316784.1 Protein Homology CDS 385639 386307 . + 0 ID=cds-WP_003401632.1;Parent=gene-AL42_RS07385;Dbxref=GenBank:WP_003401632.1;Name=WP_003401632.1;Ontology_term=GO:0006508,GO:0008234,GO:0016920,GO:0005829;gbkey=CDS;gene=pcp;go_component=cytosol|0005829||IEA;go_function=cysteine-type peptidase activity|0008234||IEA,pyroglutamyl-peptidase activity|0016920||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214833.1;locus_tag=AL42_RS07385;product=pyroglutamyl-peptidase I;protein_id=WP_003401632.1;transl_table=11 NZ_KK316784.1 RefSeq gene 386379 387041 . + . ID=gene-AL42_RS07390;Name=AL42_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07390;old_locus_tag=AL42_00333 NZ_KK316784.1 Protein Homology CDS 386379 387041 . + 0 ID=cds-WP_003401636.1;Parent=gene-AL42_RS07390;Dbxref=GenBank:WP_003401636.1;Name=WP_003401636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214834.1;locus_tag=AL42_RS07390;product=VldE C-terminal domain-containing protein;protein_id=WP_003401636.1;transl_table=11 NZ_KK316784.1 RefSeq gene 387073 387645 . + . ID=gene-AL42_RS07395;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=AL42_RS07395;old_locus_tag=AL42_00334 NZ_KK316784.1 Protein Homology CDS 387073 387645 . + 0 ID=cds-WP_003898399.1;Parent=gene-AL42_RS07395;Dbxref=GenBank:WP_003898399.1;Name=WP_003898399.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214835.1;locus_tag=AL42_RS07395;product=dCTP deaminase;protein_id=WP_003898399.1;transl_table=11 NZ_KK316784.1 RefSeq gene 387751 389082 . + . ID=gene-AL42_RS07400;Name=udgA;gbkey=Gene;gene=udgA;gene_biotype=protein_coding;locus_tag=AL42_RS07400;old_locus_tag=AL42_00335 NZ_KK316784.1 Protein Homology CDS 387751 389082 . + 0 ID=cds-WP_003898400.1;Parent=gene-AL42_RS07400;Dbxref=GenBank:WP_003898400.1;Name=WP_003898400.1;Ontology_term=GO:0016616;gbkey=CDS;gene=udgA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214836.1;locus_tag=AL42_RS07400;product=UDP-glucose dehydrogenase family protein;protein_id=WP_003898400.1;transl_table=11 NZ_KK316784.1 RefSeq gene 389071 389742 . - . ID=gene-AL42_RS07405;Name=AL42_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07405;old_locus_tag=AL42_00336 NZ_KK316784.1 Protein Homology CDS 389071 389742 . - 0 ID=cds-WP_003401643.1;Parent=gene-AL42_RS07405;Dbxref=GenBank:WP_003401643.1;Name=WP_003401643.1;Ontology_term=GO:0006506,GO:0000225;gbkey=CDS;go_function=N-acetylglucosaminylphosphatidylinositol deacetylase activity|0000225||IEA;go_process=GPI anchor biosynthetic process|0006506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214837.1;locus_tag=AL42_RS07405;product=PIG-L family deacetylase;protein_id=WP_003401643.1;transl_table=11 NZ_KK316784.1 RefSeq gene 389843 390523 . + . ID=gene-AL42_RS07410;Name=AL42_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07410;old_locus_tag=AL42_00337 NZ_KK316784.1 Protein Homology CDS 389843 390523 . + 0 ID=cds-WP_003401648.1;Parent=gene-AL42_RS07410;Dbxref=GenBank:WP_003401648.1;Name=WP_003401648.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214838.1;locus_tag=AL42_RS07410;product=Rv0324 family HTH-type transcriptional regulator;protein_id=WP_003401648.1;transl_table=11 NZ_KK316784.1 RefSeq gene 390557 391219 . + . ID=gene-AL42_RS0104190;Name=AL42_RS0104190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0104190;old_locus_tag=AL42_00339 NZ_KK316784.1 Protein Homology CDS 390557 391219 . + 0 ID=cds-WP_003900903.1;Parent=gene-AL42_RS0104190;Dbxref=GenBank:WP_003900903.1;Name=WP_003900903.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900903.1;locus_tag=AL42_RS0104190;product=class I SAM-dependent methyltransferase;protein_id=WP_003900903.1;transl_table=11 NZ_KK316784.1 RefSeq gene 391187 392536 . - . ID=gene-AL42_RS07415;Name=AL42_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07415;old_locus_tag=AL42_00340 NZ_KK316784.1 Protein Homology CDS 391187 392536 . - 0 ID=cds-WP_003401650.1;Parent=gene-AL42_RS07415;Dbxref=GenBank:WP_003401650.1;Name=WP_003401650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214841.1;locus_tag=AL42_RS07415;product=cytochrome P450;protein_id=WP_003401650.1;transl_table=11 NZ_KK316784.1 RefSeq gene 392602 393204 . + . ID=gene-AL42_RS07420;Name=AL42_RS07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07420;old_locus_tag=AL42_00341 NZ_KK316784.1 Protein Homology CDS 392602 393204 . + 0 ID=cds-WP_003401651.1;Parent=gene-AL42_RS07420;Dbxref=GenBank:WP_003401651.1;Name=WP_003401651.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214842.1;locus_tag=AL42_RS07420;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003401651.1;transl_table=11 NZ_KK316784.1 RefSeq gene 393185 393811 . - . ID=gene-AL42_RS07425;Name=AL42_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07425;old_locus_tag=AL42_00342 NZ_KK316784.1 Protein Homology CDS 393185 393811 . - 0 ID=cds-WP_003401654.1;Parent=gene-AL42_RS07425;Dbxref=GenBank:WP_003401654.1;Name=WP_003401654.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214843.1;locus_tag=AL42_RS07425;product=class I SAM-dependent methyltransferase;protein_id=WP_003401654.1;transl_table=11 NZ_KK316784.1 RefSeq gene 393838 394578 . - . ID=gene-AL42_RS07430;Name=AL42_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07430;old_locus_tag=AL42_00343 NZ_KK316784.1 Protein Homology CDS 393838 394578 . - 0 ID=cds-WP_003401656.1;Parent=gene-AL42_RS07430;Dbxref=GenBank:WP_003401656.1;Name=WP_003401656.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214844.1;locus_tag=AL42_RS07430;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003401656.1;transl_table=11 NZ_KK316784.1 RefSeq gene 394692 395858 . + . ID=gene-AL42_RS07435;Name=AL42_RS07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07435;old_locus_tag=AL42_00344 NZ_KK316784.1 Protein Homology CDS 394692 395858 . + 0 ID=cds-WP_003900904.1;Parent=gene-AL42_RS07435;Dbxref=GenBank:WP_003900904.1;Name=WP_003900904.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214845.1;locus_tag=AL42_RS07435;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_003900904.1;transl_table=11 NZ_KK316784.1 RefSeq gene 395963 396718 . + . ID=gene-AL42_RS07440;Name=AL42_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07440;old_locus_tag=AL42_00345 NZ_KK316784.1 Protein Homology CDS 395963 396718 . + 0 ID=cds-WP_003911158.1;Parent=gene-AL42_RS07440;Dbxref=GenBank:WP_003911158.1;Name=WP_003911158.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015302514.1;locus_tag=AL42_RS07440;product=maleylpyruvate isomerase family mycothiol-dependent enzyme;protein_id=WP_003911158.1;transl_table=11 NZ_KK316784.1 RefSeq gene 396745 397119 . + . ID=gene-AL42_RS07445;Name=AL42_RS07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07445;old_locus_tag=AL42_00346 NZ_KK316784.1 Protein Homology CDS 396745 397119 . + 0 ID=cds-WP_003401666.1;Parent=gene-AL42_RS07445;Dbxref=GenBank:WP_003401666.1;Name=WP_003401666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214847.1;locus_tag=AL42_RS07445;product=nuclear transport factor 2 family protein;protein_id=WP_003401666.1;transl_table=11 NZ_KK316784.1 RefSeq gene 397149 398015 . + . ID=gene-AL42_RS07450;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=AL42_RS07450;old_locus_tag=AL42_00347 NZ_KK316784.1 Protein Homology CDS 397149 398015 . + 0 ID=cds-WP_003401670.1;Parent=gene-AL42_RS07450;Dbxref=GenBank:WP_003401670.1;Name=WP_003401670.1;Ontology_term=GO:0000271,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214848.1;locus_tag=AL42_RS07450;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_003401670.1;transl_table=11 NZ_KK316784.1 RefSeq gene 398026 398478 . - . ID=gene-AL42_RS27830;Name=AL42_RS27830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27830;old_locus_tag=AL42_00348 NZ_KK316784.1 Protein Homology CDS 398026 398478 . - 0 ID=cds-WP_003911159.1;Parent=gene-AL42_RS27830;Dbxref=GenBank:WP_003911159.1;Name=WP_003911159.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: protein motif:HMM:NF013127.6;locus_tag=AL42_RS27830;product=PE family protein PE6;protein_id=WP_003911159.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 398428 398545 . + . ID=gene-AL42_RS28065;Name=AL42_RS28065;end_range=398545,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS28065;partial=true;pseudo=true;start_range=.,398428 NZ_KK316784.1 Protein Homology CDS 398428 398545 . + 0 ID=cds-AL42_RS28065;Parent=gene-AL42_RS28065;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=398545,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900311.1;locus_tag=AL42_RS28065;partial=true;product=hypothetical protein;pseudo=true;start_range=.,398428;transl_table=11 NZ_KK316784.1 RefSeq gene 398659 400194 . + . ID=gene-AL42_RS07455;Name=AL42_RS07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07455;old_locus_tag=AL42_00349 NZ_KK316784.1 Protein Homology CDS 398659 400194 . + 0 ID=cds-WP_009940213.1;Parent=gene-AL42_RS07455;Dbxref=GenBank:WP_009940213.1;Name=WP_009940213.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015287795.1;locus_tag=AL42_RS07455;product=HNH endonuclease signature motif containing protein;protein_id=WP_009940213.1;transl_table=11 NZ_KK316784.1 RefSeq gene 400364 401653 . - . ID=gene-AL42_RS07460;Name=aspC;gbkey=Gene;gene=aspC;gene_biotype=protein_coding;locus_tag=AL42_RS07460;old_locus_tag=AL42_00350 NZ_KK316784.1 Protein Homology CDS 400364 401653 . - 0 ID=cds-WP_003401733.1;Parent=gene-AL42_RS07460;Dbxref=GenBank:WP_003401733.1;Name=WP_003401733.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=aspC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214851.1;locus_tag=AL42_RS07460;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_003401733.1;transl_table=11 NZ_KK316784.1 RefSeq gene 401684 404332 . - . ID=gene-AL42_RS07465;Name=AL42_RS07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07465;old_locus_tag=AL42_00351 NZ_KK316784.1 Protein Homology CDS 401684 404332 . - 0 ID=cds-WP_003401734.1;Parent=gene-AL42_RS07465;Dbxref=GenBank:WP_003401734.1;Name=WP_003401734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214852.1;locus_tag=AL42_RS07465;product=(Fe-S)-binding protein;protein_id=WP_003401734.1;transl_table=11 NZ_KK316784.1 RefSeq gene 404441 406939 . - . ID=gene-AL42_RS07470;Name=iniR;gbkey=Gene;gene=iniR;gene_biotype=protein_coding;locus_tag=AL42_RS07470;old_locus_tag=AL42_00352 NZ_KK316784.1 Protein Homology CDS 404441 406939 . - 0 ID=cds-WP_003401735.1;Parent=gene-AL42_RS07470;Dbxref=GenBank:WP_003401735.1;Name=WP_003401735.1;gbkey=CDS;gene=iniR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214853.1;locus_tag=AL42_RS07470;product=isoniazid response ATPase/transcriptional regulator IniR;protein_id=WP_003401735.1;transl_table=11 NZ_KK316784.1 RefSeq gene 407125 407664 . + . ID=gene-AL42_RS07475;Name=AL42_RS07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07475;old_locus_tag=AL42_00353 NZ_KK316784.1 Protein Homology CDS 407125 407664 . + 0 ID=cds-WP_003401737.1;Parent=gene-AL42_RS07475;Dbxref=GenBank:WP_003401737.1;Name=WP_003401737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214854.1;locus_tag=AL42_RS07475;product=Rv0340 family IniB-related protein;protein_id=WP_003401737.1;transl_table=11 NZ_KK316784.1 RefSeq gene 407853 409292 . + . ID=gene-AL42_RS07480;Name=iniB;gbkey=Gene;gene=iniB;gene_biotype=protein_coding;locus_tag=AL42_RS07480;old_locus_tag=AL42_00354 NZ_KK316784.1 Protein Homology CDS 407853 409292 . + 0 ID=cds-WP_003901837.1;Parent=gene-AL42_RS07480;Dbxref=GenBank:WP_003901837.1;Name=WP_003901837.1;gbkey=CDS;gene=iniB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214855.1;locus_tag=AL42_RS07480;product=isoniazid-induced protein IniB;protein_id=WP_003901837.1;transl_table=11 NZ_KK316784.1 RefSeq gene 409398 411251 . + . ID=gene-AL42_RS07485;Name=iniA;gbkey=Gene;gene=iniA;gene_biotype=protein_coding;locus_tag=AL42_RS07485;old_locus_tag=AL42_00355 NZ_KK316784.1 Protein Homology CDS 409398 411251 . + 0 ID=cds-WP_003911164.1;Parent=gene-AL42_RS07485;Dbxref=GenBank:WP_003911164.1;Name=WP_003911164.1;gbkey=CDS;gene=iniA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015292084.1;locus_tag=AL42_RS07485;product=isoniazid-induced dynamin-like GTPase IniA;protein_id=WP_003911164.1;transl_table=11 NZ_KK316784.1 RefSeq gene 411248 412729 . + . ID=gene-AL42_RS07490;Name=iniC;gbkey=Gene;gene=iniC;gene_biotype=protein_coding;locus_tag=AL42_RS07490;old_locus_tag=AL42_00356 NZ_KK316784.1 Protein Homology CDS 411248 412729 . + 0 ID=cds-WP_003401747.1;Parent=gene-AL42_RS07490;Dbxref=GenBank:WP_003401747.1;Name=WP_003401747.1;gbkey=CDS;gene=iniC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214857.1;locus_tag=AL42_RS07490;product=isoniazid-induced dynamin-like GTPase IniC;protein_id=WP_003401747.1;transl_table=11 NZ_KK316784.1 RefSeq gene 412872 413432 . - . ID=gene-AL42_RS07495;Name=AL42_RS07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07495;old_locus_tag=AL42_00357 NZ_KK316784.1 Protein Homology CDS 412872 413432 . - 0 ID=cds-WP_003401751.1;Parent=gene-AL42_RS07495;Dbxref=GenBank:WP_003401751.1;Name=WP_003401751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214858.1;locus_tag=AL42_RS07495;product=hypothetical protein;protein_id=WP_003401751.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 413535 414099 . + . ID=gene-AL42_RS07500;Name=AL42_RS07500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS07500;old_locus_tag=AL42_00358;pseudo=true NZ_KK316784.1 Protein Homology CDS 413535 414099 . + 0 ID=cds-AL42_RS07500;Parent=gene-AL42_RS07500;Note=frameshifted;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007167464.1;locus_tag=AL42_RS07500;product=nucleotidyltransferase family protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 413993 415456 . - . ID=gene-AL42_RS07505;Name=AL42_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07505;old_locus_tag=AL42_00359 NZ_KK316784.1 Protein Homology CDS 413993 415456 . - 0 ID=cds-WP_003898409.1;Parent=gene-AL42_RS07505;Dbxref=GenBank:WP_003898409.1;Name=WP_003898409.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177718.1;locus_tag=AL42_RS07505;product=amino acid permease;protein_id=WP_003898409.1;transl_table=11 NZ_KK316784.1 RefSeq gene 415969 416781 . + . ID=gene-AL42_RS07510;Name=AL42_RS07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07510;old_locus_tag=AL42_00360 NZ_KK316784.1 Protein Homology CDS 415969 416781 . + 0 ID=cds-WP_003911187.1;Parent=gene-AL42_RS07510;Dbxref=GenBank:WP_003911187.1;Name=WP_003911187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911187.1;locus_tag=AL42_RS07510;product=TIGR04255 family protein;protein_id=WP_003911187.1;transl_table=11 NZ_KK316784.1 RefSeq gene 416784 417437 . + . ID=gene-AL42_RS07515;Name=mosR;gbkey=Gene;gene=mosR;gene_biotype=protein_coding;locus_tag=AL42_RS07515;old_locus_tag=AL42_00361 NZ_KK316784.1 Protein Homology CDS 416784 417437 . + 0 ID=cds-WP_003401756.1;Parent=gene-AL42_RS07515;Dbxref=GenBank:WP_003401756.1;Name=WP_003401756.1;gbkey=CDS;gene=mosR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214862.1;locus_tag=AL42_RS07515;product=hypoxia/intracellular survival transcriptional regulator MosR;protein_id=WP_003401756.1;transl_table=11 NZ_KK316784.1 RefSeq gene 417392 417610 . - . ID=gene-AL42_RS27440;Name=AL42_RS27440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27440 NZ_KK316784.1 Protein Homology CDS 417392 417610 . - 0 ID=cds-WP_003918061.1;Parent=gene-AL42_RS27440;Dbxref=GenBank:WP_003918061.1;Name=WP_003918061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003918061.1;locus_tag=AL42_RS27440;product=hypothetical protein;protein_id=WP_003918061.1;transl_table=11 NZ_KK316784.1 RefSeq gene 417557 418099 . + . ID=gene-AL42_RS07520;Name=AL42_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07520;old_locus_tag=AL42_00362 NZ_KK316784.1 Protein Homology CDS 417557 418099 . + 0 ID=cds-WP_003401808.1;Parent=gene-AL42_RS07520;Dbxref=GenBank:WP_003401808.1;Name=WP_003401808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003401808.1;locus_tag=AL42_RS07520;product=hypothetical protein;protein_id=WP_003401808.1;transl_table=11 NZ_KK316784.1 RefSeq gene 418326 420203 . + . ID=gene-AL42_RS07525;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=AL42_RS07525;old_locus_tag=AL42_00363 NZ_KK316784.1 Protein Homology CDS 418326 420203 . + 0 ID=cds-WP_003401814.1;Parent=gene-AL42_RS07525;Dbxref=GenBank:WP_003401814.1;Name=WP_003401814.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214864.1;locus_tag=AL42_RS07525;product=molecular chaperone DnaK;protein_id=WP_003401814.1;transl_table=11 NZ_KK316784.1 RefSeq gene 420200 420907 . + . ID=gene-AL42_RS07530;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=AL42_RS07530;old_locus_tag=AL42_00364 NZ_KK316784.1 Protein Homology CDS 420200 420907 . + 0 ID=cds-WP_003401817.1;Parent=gene-AL42_RS07530;Dbxref=GenBank:WP_003401817.1;Name=WP_003401817.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214865.1;locus_tag=AL42_RS07530;product=nucleotide exchange factor GrpE;protein_id=WP_003401817.1;transl_table=11 NZ_KK316784.1 RefSeq gene 420943 422130 . + . ID=gene-AL42_RS07535;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=AL42_RS07535;old_locus_tag=AL42_00365 NZ_KK316784.1 Protein Homology CDS 420943 422130 . + 0 ID=cds-WP_003401821.1;Parent=gene-AL42_RS07535;Dbxref=GenBank:WP_003401821.1;Name=WP_003401821.1;gbkey=CDS;gene=dnaJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177719.1;locus_tag=AL42_RS07535;product=molecular chaperone DnaJ;protein_id=WP_003401821.1;transl_table=11 NZ_KK316784.1 RefSeq gene 422130 422510 . + . ID=gene-AL42_RS07540;Name=hspR;gbkey=Gene;gene=hspR;gene_biotype=protein_coding;locus_tag=AL42_RS07540;old_locus_tag=AL42_00366 NZ_KK316784.1 Protein Homology CDS 422130 422510 . + 0 ID=cds-WP_003401823.1;Parent=gene-AL42_RS07540;Dbxref=GenBank:WP_003401823.1;Name=WP_003401823.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hspR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214867.1;locus_tag=AL42_RS07540;product=heat shock protein transcriptional repressor HspR;protein_id=WP_003401823.1;transl_table=11 NZ_KK316784.1 RefSeq gene 422686 423237 . - . ID=gene-AL42_RS26750;Name=AL42_RS26750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS26750;old_locus_tag=AL42_00367 NZ_KK316784.1 GeneMarkS-2+ CDS 422686 423237 . - 0 ID=cds-WP_003898412.1;Parent=gene-AL42_RS26750;Dbxref=GenBank:WP_003898412.1;Name=WP_003898412.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL42_RS26750;product=hypothetical protein;protein_id=WP_003898412.1;transl_table=11 NZ_KK316784.1 RefSeq gene 423320 432991 . - . ID=gene-AL42_RS07550;Name=AL42_RS07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07550;old_locus_tag=AL42_00368 NZ_KK316784.1 Protein Homology CDS 423320 432991 . - 0 ID=cds-WP_031710791.1;Parent=gene-AL42_RS07550;Dbxref=GenBank:WP_031710791.1;Name=WP_031710791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177721.2;locus_tag=AL42_RS07550;product=PPE family protein;protein_id=WP_031710791.1;transl_table=11 NZ_KK316784.1 RefSeq gene 433142 433786 . - . ID=gene-AL42_RS07555;Name=AL42_RS07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07555;old_locus_tag=AL42_00369 NZ_KK316784.1 Protein Homology CDS 433142 433786 . - 0 ID=cds-WP_003401827.1;Parent=gene-AL42_RS07555;Dbxref=GenBank:WP_003401827.1;Name=WP_003401827.1;Ontology_term=GO:0016790,GO:0047617;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA,fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214870.1;locus_tag=AL42_RS07555;product=PaaI family thioesterase;protein_id=WP_003401827.1;transl_table=11 NZ_KK316784.1 RefSeq gene 433783 435081 . - . ID=gene-AL42_RS07560;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=AL42_RS07560;old_locus_tag=AL42_00370 NZ_KK316784.1 Protein Homology CDS 433783 435081 . - 0 ID=cds-WP_003401829.1;Parent=gene-AL42_RS07560;Dbxref=GenBank:WP_003401829.1;Name=WP_003401829.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;gene=purA;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214871.1;locus_tag=AL42_RS07560;product=adenylosuccinate synthase;protein_id=WP_003401829.1;transl_table=11 NZ_KK316784.1 RefSeq gene 435172 435819 . + . ID=gene-AL42_RS07565;Name=AL42_RS07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07565;old_locus_tag=AL42_00371 NZ_KK316784.1 Protein Homology CDS 435172 435819 . + 0 ID=cds-WP_003401831.1;Parent=gene-AL42_RS07565;Dbxref=GenBank:WP_003401831.1;Name=WP_003401831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214872.1;locus_tag=AL42_RS07565;product=hypothetical protein;protein_id=WP_003401831.1;transl_table=11 NZ_KK316784.1 RefSeq gene 435830 436609 . + . ID=gene-AL42_RS07570;Name=AL42_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07570;old_locus_tag=AL42_00372 NZ_KK316784.1 Protein Homology CDS 435830 436609 . + 0 ID=cds-WP_003898413.1;Parent=gene-AL42_RS07570;Dbxref=GenBank:WP_003898413.1;Name=WP_003898413.1;Ontology_term=GO:0006508,GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214873.1;locus_tag=AL42_RS07570;product=site-2 protease family protein;protein_id=WP_003898413.1;transl_table=11 NZ_KK316784.1 RefSeq gene 436614 437027 . - . ID=gene-AL42_RS07575;Name=AL42_RS07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07575;old_locus_tag=AL42_00373 NZ_KK316784.1 Protein Homology CDS 436614 437027 . - 0 ID=cds-WP_003401852.1;Parent=gene-AL42_RS07575;Dbxref=GenBank:WP_003401852.1;Name=WP_003401852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011726247.1;locus_tag=AL42_RS07575;product=DUF3151 domain-containing protein;protein_id=WP_003401852.1;transl_table=11 NZ_KK316784.1 RefSeq gene 437134 437961 . + . ID=gene-AL42_RS07580;Name=AL42_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07580;old_locus_tag=AL42_00374 NZ_KK316784.1 Protein Homology CDS 437134 437961 . + 0 ID=cds-WP_003401853.1;Parent=gene-AL42_RS07580;Dbxref=GenBank:WP_003401853.1;Name=WP_003401853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214875.1;locus_tag=AL42_RS07580;product=Rv0361 family membrane protein;protein_id=WP_003401853.1;transl_table=11 NZ_KK316784.1 RefSeq gene 438183 439565 . + . ID=gene-AL42_RS07585;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=AL42_RS07585;old_locus_tag=AL42_00375 NZ_KK316784.1 Protein Homology CDS 438183 439565 . + 0 ID=cds-WP_003898415.1;Parent=gene-AL42_RS07585;Dbxref=GenBank:WP_003898415.1;Name=WP_003898415.1;Ontology_term=GO:0015693,GO:0015095,GO:0016020;gbkey=CDS;gene=mgtE;go_component=membrane|0016020||IEA;go_function=magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214876.1;locus_tag=AL42_RS07585;product=magnesium transporter;protein_id=WP_003898415.1;transl_table=11 NZ_KK316784.1 RefSeq gene 439577 440611 . - . ID=gene-AL42_RS07590;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=AL42_RS07590;old_locus_tag=AL42_00376 NZ_KK316784.1 Protein Homology CDS 439577 440611 . - 0 ID=cds-WP_003401856.1;Parent=gene-AL42_RS07590;Dbxref=GenBank:WP_003401856.1;Name=WP_003401856.1;Ontology_term=GO:0006096,GO:0004332;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214877.1;locus_tag=AL42_RS07590;product=class II fructose-bisphosphate aldolase;protein_id=WP_003401856.1;transl_table=11 NZ_KK316784.1 RefSeq gene 440707 441390 . + . ID=gene-AL42_RS07595;Name=AL42_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07595;old_locus_tag=AL42_00377 NZ_KK316784.1 Protein Homology CDS 440707 441390 . + 0 ID=cds-WP_003401857.1;Parent=gene-AL42_RS07595;Dbxref=GenBank:WP_003401857.1;Name=WP_003401857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214878.1;locus_tag=AL42_RS07595;product=VTT domain-containing protein;protein_id=WP_003401857.1;transl_table=11 NZ_KK316784.1 RefSeq gene 441379 442509 . - . ID=gene-AL42_RS07600;Name=AL42_RS07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07600;old_locus_tag=AL42_00378 NZ_KK316784.1 Protein Homology CDS 441379 442509 . - 0 ID=cds-WP_003401858.1;Parent=gene-AL42_RS07600;Dbxref=GenBank:WP_003401858.1;Name=WP_003401858.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214879.1;locus_tag=AL42_RS07600;product=glycoside hydrolase family 76 protein;protein_id=WP_003401858.1;transl_table=11 NZ_KK316784.1 RefSeq gene 442534 443127 . - . ID=gene-AL42_RS07605;Name=AL42_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07605;old_locus_tag=AL42_00379 NZ_KK316784.1 Protein Homology CDS 442534 443127 . - 0 ID=cds-WP_003401859.1;Parent=gene-AL42_RS07605;Dbxref=GenBank:WP_003401859.1;Name=WP_003401859.1;Ontology_term=GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214880.1;locus_tag=AL42_RS07605;product=ATPase;protein_id=WP_003401859.1;transl_table=11 NZ_KK316784.1 RefSeq gene 443156 443545 . - . ID=gene-AL42_RS07610;Name=AL42_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07610;old_locus_tag=AL42_00380 NZ_KK316784.1 Protein Homology CDS 443156 443545 . - 0 ID=cds-WP_003401860.1;Parent=gene-AL42_RS07610;Dbxref=GenBank:WP_003401860.1;Name=WP_003401860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214881.1;locus_tag=AL42_RS07610;product=TA system antitoxin ParD family protein;protein_id=WP_003401860.1;transl_table=11 NZ_KK316784.1 RefSeq gene 443626 444837 . - . ID=gene-AL42_RS07615;Name=AL42_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07615;old_locus_tag=AL42_00381 NZ_KK316784.1 Protein Homology CDS 443626 444837 . - 0 ID=cds-WP_003401861.1;Parent=gene-AL42_RS07615;Dbxref=GenBank:WP_003401861.1;Name=WP_003401861.1;Ontology_term=GO:0009297;gbkey=CDS;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214882.1;locus_tag=AL42_RS07615;product=vWA domain-containing protein;protein_id=WP_003401861.1;transl_table=11 NZ_KK316784.1 RefSeq gene 444843 445445 . - . ID=gene-AL42_RS07620;Name=AL42_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07620;old_locus_tag=AL42_00382 NZ_KK316784.1 Protein Homology CDS 444843 445445 . - 0 ID=cds-WP_003898417.1;Parent=gene-AL42_RS07620;Dbxref=GenBank:WP_003898417.1;Name=WP_003898417.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898417.1;locus_tag=AL42_RS07620;product=SRPBCC family protein;protein_id=WP_003898417.1;transl_table=11 NZ_KK316784.1 RefSeq gene 445459 446355 . - . ID=gene-AL42_RS07625;Name=AL42_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07625;old_locus_tag=AL42_00383 NZ_KK316784.1 Protein Homology CDS 445459 446355 . - 0 ID=cds-WP_003898418.1;Parent=gene-AL42_RS07625;Dbxref=GenBank:WP_003898418.1;Name=WP_003898418.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214884.1;locus_tag=AL42_RS07625;product=AAA family ATPase;protein_id=WP_003898418.1;transl_table=11 NZ_KK316784.1 RefSeq gene 446352 446945 . - . ID=gene-AL42_RS07630;Name=AL42_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07630;old_locus_tag=AL42_00384 NZ_KK316784.1 Protein Homology CDS 446352 446945 . - 0 ID=cds-WP_003401864.1;Parent=gene-AL42_RS07630;Dbxref=GenBank:WP_003401864.1;Name=WP_003401864.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214885.1;locus_tag=AL42_RS07630;product=nucleotidyltransferase family protein;protein_id=WP_003401864.1;transl_table=11 NZ_KK316784.1 RefSeq gene 446942 447697 . - . ID=gene-AL42_RS07635;Name=AL42_RS07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07635;old_locus_tag=AL42_00385 NZ_KK316784.1 Protein Homology CDS 446942 447697 . - 0 ID=cds-WP_003401865.1;Parent=gene-AL42_RS07635;Dbxref=GenBank:WP_003401865.1;Name=WP_003401865.1;Ontology_term=GO:0070403;gbkey=CDS;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214886.1;locus_tag=AL42_RS07635;product=XdhC family protein;protein_id=WP_003401865.1;transl_table=11 NZ_KK316784.1 RefSeq gene 447716 450115 . - . ID=gene-AL42_RS07640;Name=AL42_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07640;old_locus_tag=AL42_00386 NZ_KK316784.1 Protein Homology CDS 447716 450115 . - 0 ID=cds-WP_003900133.1;Parent=gene-AL42_RS07640;Dbxref=GenBank:WP_003900133.1;Name=WP_003900133.1;Ontology_term=GO:0005507,GO:0030151,GO:0043885;gbkey=CDS;go_function=copper ion binding|0005507||IEA,molybdenum ion binding|0030151||IEA,anaerobic carbon-monoxide dehydrogenase activity|0043885||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214887.1;locus_tag=AL42_RS07640;product=aerobic carbon-monoxide dehydrogenase large subunit;protein_id=WP_003900133.1;transl_table=11 NZ_KK316784.1 RefSeq gene 450112 450591 . - . ID=gene-AL42_RS07645;Name=AL42_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07645;old_locus_tag=AL42_00387 NZ_KK316784.1 Protein Homology CDS 450112 450591 . - 0 ID=cds-WP_003401867.1;Parent=gene-AL42_RS07645;Dbxref=GenBank:WP_003401867.1;Name=WP_003401867.1;Ontology_term=GO:0046872,GO:0051536,GO:0051537;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214888.1;locus_tag=AL42_RS07645;product=(2Fe-2S)-binding protein;protein_id=WP_003401867.1;transl_table=11 NZ_KK316784.1 RefSeq gene 450606 451508 . - . ID=gene-AL42_RS07650;Name=AL42_RS07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07650;old_locus_tag=AL42_00388 NZ_KK316784.1 Protein Homology CDS 450606 451508 . - 0 ID=cds-WP_003898419.1;Parent=gene-AL42_RS07650;Dbxref=GenBank:WP_003898419.1;Name=WP_003898419.1;Ontology_term=GO:0050660,GO:1990204;gbkey=CDS;go_component=oxidoreductase complex|1990204||IEA;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898419.1;locus_tag=AL42_RS07650;product=FAD binding domain-containing protein;protein_id=WP_003898419.1;transl_table=11 NZ_KK316784.1 RefSeq gene 451542 452708 . - . ID=gene-AL42_RS07655;Name=AL42_RS07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07655;old_locus_tag=AL42_00389 NZ_KK316784.1 Protein Homology CDS 451542 452708 . - 0 ID=cds-WP_003918064.1;Parent=gene-AL42_RS07655;Dbxref=GenBank:WP_003918064.1;Name=WP_003918064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003918064.1;locus_tag=AL42_RS07655;product=XdhC family protein;protein_id=WP_003918064.1;transl_table=11 NZ_KK316784.1 RefSeq gene 452733 453698 . + . ID=gene-AL42_RS07660;Name=AL42_RS07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07660;old_locus_tag=AL42_00390 NZ_KK316784.1 Protein Homology CDS 452733 453698 . + 0 ID=cds-WP_003898421.1;Parent=gene-AL42_RS07660;Dbxref=GenBank:WP_003898421.1;Name=WP_003898421.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214891.1;locus_tag=AL42_RS07660;product=LysR family transcriptional regulator;protein_id=WP_003898421.1;transl_table=11 NZ_KK316784.1 RefSeq gene 453949 454170 . + . ID=gene-AL42_RS07665;Name=AL42_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07665;old_locus_tag=AL42_00391 NZ_KK316784.1 GeneMarkS-2+ CDS 453949 454170 . + 0 ID=cds-WP_003401880.1;Parent=gene-AL42_RS07665;Dbxref=GenBank:WP_003401880.1;Name=WP_003401880.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL42_RS07665;product=hypothetical protein;protein_id=WP_003401880.1;transl_table=11 NZ_KK316784.1 RefSeq gene 454289 454504 . + . ID=gene-AL42_RS07670;Name=secE2;gbkey=Gene;gene=secE2;gene_biotype=protein_coding;locus_tag=AL42_RS07670;old_locus_tag=AL42_00392 NZ_KK316784.1 Protein Homology CDS 454289 454504 . + 0 ID=cds-WP_003401885.1;Parent=gene-AL42_RS07670;Dbxref=GenBank:WP_003401885.1;Name=WP_003401885.1;gbkey=CDS;gene=secE2;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177722.1;locus_tag=AL42_RS07670;product=calcium dodecin;protein_id=WP_003401885.1;transl_table=11 NZ_KK316784.1 RefSeq gene 454580 455230 . - . ID=gene-AL42_RS07675;Name=AL42_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07675;old_locus_tag=AL42_00393 NZ_KK316784.1 Protein Homology CDS 454580 455230 . - 0 ID=cds-WP_029398175.1;Parent=gene-AL42_RS07675;Dbxref=GenBank:WP_029398175.1;Name=WP_029398175.1;Ontology_term=GO:0006396,GO:0032259,GO:0003723,GO:0008173,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA processing|0006396||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900914.1;locus_tag=AL42_RS07675;product=TrmH family RNA methyltransferase;protein_id=WP_029398175.1;transl_table=11 NZ_KK316784.1 RefSeq gene 455227 456135 . - . ID=gene-AL42_RS07680;Name=AL42_RS07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07680;old_locus_tag=AL42_00394 NZ_KK316784.1 Protein Homology CDS 455227 456135 . - 0 ID=cds-WP_003401890.1;Parent=gene-AL42_RS07680;Dbxref=GenBank:WP_003401890.1;Name=WP_003401890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214895.1;locus_tag=AL42_RS07680;product=hypothetical protein;protein_id=WP_003401890.1;transl_table=11 NZ_KK316784.1 RefSeq gene 456153 456692 . - . ID=gene-AL42_RS07685;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=AL42_RS07685;old_locus_tag=AL42_00395 NZ_KK316784.1 Protein Homology CDS 456153 456692 . - 0 ID=cds-WP_003401894.1;Parent=gene-AL42_RS07685;Dbxref=GenBank:WP_003401894.1;Name=WP_003401894.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177723.1;locus_tag=AL42_RS07685;product=orotate phosphoribosyltransferase;protein_id=WP_003401894.1;transl_table=11 NZ_KK316784.1 RefSeq gene 456773 457627 . - . ID=gene-AL42_RS07690;Name=ttfA;gbkey=Gene;gene=ttfA;gene_biotype=protein_coding;locus_tag=AL42_RS07690;old_locus_tag=AL42_00396 NZ_KK316784.1 Protein Homology CDS 456773 457627 . - 0 ID=cds-WP_003401897.1;Parent=gene-AL42_RS07690;Dbxref=GenBank:WP_003401897.1;Name=WP_003401897.1;Ontology_term=GO:0071555;gbkey=CDS;gene=ttfA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214897.1;locus_tag=AL42_RS07690;product=trehalose monomycolate transport factor TtfA;protein_id=WP_003401897.1;transl_table=11 NZ_KK316784.1 RefSeq gene 457768 460314 . - . ID=gene-AL42_RS07695;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=AL42_RS07695;old_locus_tag=AL42_00397 NZ_KK316784.1 Protein Homology CDS 457768 460314 . - 0 ID=cds-WP_003401905.1;Parent=gene-AL42_RS07695;Dbxref=GenBank:WP_003401905.1;Name=WP_003401905.1;Ontology_term=GO:0009408,GO:0042026,GO:0005737;gbkey=CDS;gene=clpB;go_component=cytoplasm|0005737||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003401905.1;locus_tag=AL42_RS07695;product=ATP-dependent chaperone ClpB;protein_id=WP_003401905.1;transl_table=11 NZ_KK316784.1 RefSeq gene 460447 461619 . + . ID=gene-AL42_RS07700;Name=AL42_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07700;old_locus_tag=AL42_00398 NZ_KK316784.1 Protein Homology CDS 460447 461619 . + 0 ID=cds-WP_003401910.1;Parent=gene-AL42_RS07700;Dbxref=GenBank:WP_003401910.1;Name=WP_003401910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214899.1;locus_tag=AL42_RS07700;product=FAD-binding oxidoreductase;protein_id=WP_003401910.1;transl_table=11 NZ_KK316784.1 RefSeq gene 461723 464980 . + . ID=gene-AL42_RS07705;Name=AL42_RS07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07705;old_locus_tag=AL42_00399 NZ_KK316784.1 Protein Homology CDS 461723 464980 . + 0 ID=cds-WP_031721781.1;Parent=gene-AL42_RS07705;Dbxref=GenBank:WP_031721781.1;Name=WP_031721781.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214900.1;locus_tag=AL42_RS07705;product=helix-turn-helix transcriptional regulator;protein_id=WP_031721781.1;transl_table=11 NZ_KK316784.1 RefSeq gene 464984 466315 . - . ID=gene-AL42_RS07710;Name=AL42_RS07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07710;old_locus_tag=AL42_00400 NZ_KK316784.1 Protein Homology CDS 464984 466315 . - 0 ID=cds-WP_003401914.1;Parent=gene-AL42_RS07710;Dbxref=GenBank:WP_003401914.1;Name=WP_003401914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015287807.1;locus_tag=AL42_RS07710;product=PPE family protein;protein_id=WP_003401914.1;transl_table=11 NZ_KK316784.1 RefSeq gene 466649 467908 . + . ID=gene-AL42_RS07715;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=AL42_RS07715;old_locus_tag=AL42_00401 NZ_KK316784.1 Protein Homology CDS 466649 467908 . + 0 ID=cds-WP_003898427.1;Parent=gene-AL42_RS07715;Dbxref=GenBank:WP_003898427.1;Name=WP_003898427.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524,GO:0016742;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA,hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214903.1;locus_tag=AL42_RS07715;product=phosphoribosylglycinamide formyltransferase 2;protein_id=WP_003898427.1;transl_table=11 NZ_KK316784.1 RefSeq gene 467905 468327 . + . ID=gene-AL42_RS07720;Name=AL42_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07720;old_locus_tag=AL42_00402 NZ_KK316784.1 Protein Homology CDS 467905 468327 . + 0 ID=cds-WP_003401921.1;Parent=gene-AL42_RS07720;Dbxref=GenBank:WP_003401921.1;Name=WP_003401921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214904.1;locus_tag=AL42_RS07720;product=rhodanese-like domain-containing protein;protein_id=WP_003401921.1;transl_table=11 NZ_KK316784.1 RefSeq gene 468324 469544 . + . ID=gene-AL42_RS07725;Name=metZ;gbkey=Gene;gene=metZ;gene_biotype=protein_coding;locus_tag=AL42_RS07725;old_locus_tag=AL42_00403 NZ_KK316784.1 Protein Homology CDS 468324 469544 . + 0 ID=cds-WP_003401927.1;Parent=gene-AL42_RS07725;Dbxref=GenBank:WP_003401927.1;Name=WP_003401927.1;gbkey=CDS;gene=metZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214905.1;locus_tag=AL42_RS07725;product=O-succinylhomoserine sulfhydrylase;protein_id=WP_003401927.1;transl_table=11 NZ_KK316784.1 RefSeq gene 469541 470953 . - . ID=gene-AL42_RS07730;Name=ndhA;gbkey=Gene;gene=ndhA;gene_biotype=protein_coding;locus_tag=AL42_RS07730;old_locus_tag=AL42_00404 NZ_KK316784.1 Protein Homology CDS 469541 470953 . - 0 ID=cds-WP_003898428.1;Parent=gene-AL42_RS07730;Dbxref=GenBank:WP_003898428.1;Name=WP_003898428.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;gene=ndhA;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214906.1;locus_tag=AL42_RS07730;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_003898428.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 471228 472420 . + . ID=gene-AL42_RS07735;Name=AL42_RS07735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS07735;old_locus_tag=AL42_00405;pseudo=true NZ_KK316784.1 Protein Homology CDS 471228 472420 . + 0 ID=cds-AL42_RS07735;Parent=gene-AL42_RS07735;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014741.6;locus_tag=AL42_RS07735;product=DUF222 domain-containing protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 472436 473155 . - . ID=gene-AL42_RS07740;Name=AL42_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07740;old_locus_tag=AL42_00406 NZ_KK316784.1 Protein Homology CDS 472436 473155 . - 0 ID=cds-WP_003401942.1;Parent=gene-AL42_RS07740;Dbxref=GenBank:WP_003401942.1;Name=WP_003401942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214908.1;locus_tag=AL42_RS07740;product=hyaluronidase/chondrosulfatase;protein_id=WP_003401942.1;transl_table=11 NZ_KK316784.1 RefSeq gene 473254 473658 . + . ID=gene-AL42_RS07745;Name=AL42_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07745;old_locus_tag=AL42_00407 NZ_KK316784.1 Protein Homology CDS 473254 473658 . + 0 ID=cds-WP_003401944.1;Parent=gene-AL42_RS07745;Dbxref=GenBank:WP_003401944.1;Name=WP_003401944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214909.1;locus_tag=AL42_RS07745;product=hypothetical protein;protein_id=WP_003401944.1;transl_table=11 NZ_KK316784.1 RefSeq gene 473664 474056 . + . ID=gene-AL42_RS07750;Name=AL42_RS07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07750;old_locus_tag=AL42_00408 NZ_KK316784.1 Protein Homology CDS 473664 474056 . + 0 ID=cds-WP_003401950.1;Parent=gene-AL42_RS07750;Dbxref=GenBank:WP_003401950.1;Name=WP_003401950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214910.1;locus_tag=AL42_RS07750;product=hypothetical protein;protein_id=WP_003401950.1;transl_table=11 NZ_KK316784.1 RefSeq gene 474130 474498 . + . ID=gene-AL42_RS07755;Name=AL42_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07755;old_locus_tag=AL42_00409 NZ_KK316784.1 Protein Homology CDS 474130 474498 . + 0 ID=cds-WP_003401960.1;Parent=gene-AL42_RS07755;Dbxref=GenBank:WP_003401960.1;Name=WP_003401960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014712350.1;locus_tag=AL42_RS07755;product=hypothetical protein;protein_id=WP_003401960.1;transl_table=11 NZ_KK316784.1 RefSeq gene 474708 474956 . + . ID=gene-AL42_RS07760;Name=AL42_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07760;old_locus_tag=AL42_00410 NZ_KK316784.1 Protein Homology CDS 474708 474956 . + 0 ID=cds-WP_003898430.1;Parent=gene-AL42_RS07760;Dbxref=GenBank:WP_003898430.1;Name=WP_003898430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004837048.2;locus_tag=AL42_RS07760;product=hypothetical protein;protein_id=WP_003898430.1;transl_table=11 NZ_KK316784.1 RefSeq gene 474993 475634 . - . ID=gene-AL42_RS07765;Name=AL42_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07765;old_locus_tag=AL42_00411 NZ_KK316784.1 Protein Homology CDS 474993 475634 . - 0 ID=cds-WP_003900917.1;Parent=gene-AL42_RS07765;Dbxref=GenBank:WP_003900917.1;Name=WP_003900917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214912.1;locus_tag=AL42_RS07765;product=hypothetical protein;protein_id=WP_003900917.1;transl_table=11 NZ_KK316784.1 RefSeq gene 475641 476870 . - . ID=gene-AL42_RS07770;Name=lpqK;gbkey=Gene;gene=lpqK;gene_biotype=protein_coding;locus_tag=AL42_RS07770;old_locus_tag=AL42_00412 NZ_KK316784.1 Protein Homology CDS 475641 476870 . - 0 ID=cds-WP_003898432.1;Parent=gene-AL42_RS07770;Dbxref=GenBank:WP_003898432.1;Name=WP_003898432.1;Ontology_term=GO:0016787;gbkey=CDS;gene=lpqK;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214913.1;locus_tag=AL42_RS07770;product=serine hydrolase domain-containing protein;protein_id=WP_003898432.1;transl_table=11 NZ_KK316784.1 RefSeq gene 476880 478067 . - . ID=gene-AL42_RS07775;Name=AL42_RS07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07775;old_locus_tag=AL42_00413 NZ_KK316784.1 Protein Homology CDS 476880 478067 . - 0 ID=cds-WP_003401972.1;Parent=gene-AL42_RS07775;Dbxref=GenBank:WP_003401972.1;Name=WP_003401972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214914.1;locus_tag=AL42_RS07775;product=acyl-CoA dehydrogenase;protein_id=WP_003401972.1;transl_table=11 NZ_KK316784.1 RefSeq gene 478103 478474 . + . ID=gene-AL42_RS07780;Name=AL42_RS07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07780;old_locus_tag=AL42_00414 NZ_KK316784.1 Protein Homology CDS 478103 478474 . + 0 ID=cds-WP_003401978.1;Parent=gene-AL42_RS07780;Dbxref=GenBank:WP_003401978.1;Name=WP_003401978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214915.1;locus_tag=AL42_RS07780;product=DUF3054 domain-containing protein;protein_id=WP_003401978.1;transl_table=11 NZ_KK316784.1 RefSeq gene 478669 481545 . - . ID=gene-AL42_RS07785;Name=mmpL1;gbkey=Gene;gene=mmpL1;gene_biotype=protein_coding;locus_tag=AL42_RS07785;old_locus_tag=AL42_00415 NZ_KK316784.1 Protein Homology CDS 478669 481545 . - 0 ID=cds-WP_003898435.1;Parent=gene-AL42_RS07785;Dbxref=GenBank:WP_003898435.1;Name=WP_003898435.1;gbkey=CDS;gene=mmpL1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214916.1;locus_tag=AL42_RS07785;product=RND transporter MmpL1;protein_id=WP_003898435.1;transl_table=11 NZ_KK316784.1 RefSeq gene 481542 481970 . - . ID=gene-AL42_RS07790;Name=AL42_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07790;old_locus_tag=AL42_00416 NZ_KK316784.1 Protein Homology CDS 481542 481970 . - 0 ID=cds-WP_003402074.1;Parent=gene-AL42_RS07790;Dbxref=GenBank:WP_003402074.1;Name=WP_003402074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214917.1;locus_tag=AL42_RS07790;product=MmpS family transport accessory protein;protein_id=WP_003402074.1;transl_table=11 NZ_KK316784.1 RefSeq gene 482291 484048 . + . ID=gene-AL42_RS07795;Name=fadD30;gbkey=Gene;gene=fadD30;gene_biotype=protein_coding;gene_synonym=faaL30;locus_tag=AL42_RS07795;old_locus_tag=AL42_00417 NZ_KK316784.1 Protein Homology CDS 482291 484048 . + 0 ID=cds-WP_003900921.1;Parent=gene-AL42_RS07795;Dbxref=GenBank:WP_003900921.1;Name=WP_003900921.1;gbkey=CDS;gene=fadD30;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900139.1;locus_tag=AL42_RS07795;product=fatty-acid--AMP ligase FAAL30/FadD30;protein_id=WP_003900921.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 484045 488252 . + . ID=gene-AL42_RS07800;Name=AL42_RS07800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS07800;old_locus_tag=AL42_00418;pseudo=true NZ_KK316784.1 Protein Homology CDS 484045 488252 . + 0 ID=cds-AL42_RS07800;Parent=gene-AL42_RS07800;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003402080.1;locus_tag=AL42_RS07800;product=beta-ketoacyl synthase N-terminal-like domain-containing protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 488200 488958 . - . ID=gene-AL42_RS07805;Name=AL42_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07805;old_locus_tag=AL42_00419 NZ_KK316784.1 Protein Homology CDS 488200 488958 . - 0 ID=cds-WP_003911199.1;Parent=gene-AL42_RS07805;Dbxref=GenBank:WP_003911199.1;Name=WP_003911199.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015289016.1;locus_tag=AL42_RS07805;product=MBL fold metallo-hydrolase;protein_id=WP_003911199.1;transl_table=11 NZ_KK316784.1 RefSeq gene 489096 490106 . + . ID=gene-AL42_RS07810;Name=fgd;gbkey=Gene;gene=fgd;gene_biotype=protein_coding;locus_tag=AL42_RS07810;old_locus_tag=AL42_00420 NZ_KK316784.1 Protein Homology CDS 489096 490106 . + 0 ID=cds-WP_003898438.1;Parent=gene-AL42_RS07810;Dbxref=GenBank:WP_003898438.1;Name=WP_003898438.1;Ontology_term=GO:0006007,GO:0016614,GO:0070967;gbkey=CDS;gene=fgd;go_function=oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,coenzyme F420 binding|0070967||IEA;go_process=glucose catabolic process|0006007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214921.1;locus_tag=AL42_RS07810;product=glucose-6-phosphate dehydrogenase (coenzyme-F420);protein_id=WP_003898438.1;transl_table=11 NZ_KK316784.1 RefSeq gene 490099 492171 . + . ID=gene-AL42_RS07815;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=AL42_RS07815;old_locus_tag=AL42_00421 NZ_KK316784.1 Protein Homology CDS 490099 492171 . + 0 ID=cds-WP_003402089.1;Parent=gene-AL42_RS07815;Dbxref=GenBank:WP_003402089.1;Name=WP_003402089.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214922.1;locus_tag=AL42_RS07815;product=phosphate acetyltransferase;protein_id=WP_003402089.1;transl_table=11 NZ_KK316784.1 RefSeq gene 492164 493321 . + . ID=gene-AL42_RS07820;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=AL42_RS07820;old_locus_tag=AL42_00422 NZ_KK316784.1 Protein Homology CDS 492164 493321 . + 0 ID=cds-WP_003402097.1;Parent=gene-AL42_RS07820;Dbxref=GenBank:WP_003402097.1;Name=WP_003402097.1;Ontology_term=GO:0006085,GO:0016310,GO:0000287,GO:0005524,GO:0008776;gbkey=CDS;gene=ackA;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,acetate kinase activity|0008776||IEA;go_process=acetyl-CoA biosynthetic process|0006085||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214923.1;locus_tag=AL42_RS07820;product=acetate kinase;protein_id=WP_003402097.1;transl_table=11 NZ_KK316784.1 RefSeq gene 493375 495627 . - . ID=gene-AL42_RS07825;Name=pknG;gbkey=Gene;gene=pknG;gene_biotype=protein_coding;locus_tag=AL42_RS07825;old_locus_tag=AL42_00423 NZ_KK316784.1 Protein Homology CDS 493375 495627 . - 0 ID=cds-WP_003402100.1;Parent=gene-AL42_RS07825;Dbxref=GenBank:WP_003402100.1;Name=WP_003402100.1;gbkey=CDS;gene=pknG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214924.1;locus_tag=AL42_RS07825;product=serine/threonine protein kinase PknG;protein_id=WP_003402100.1;transl_table=11 NZ_KK316784.1 RefSeq gene 495627 496613 . - . ID=gene-AL42_RS07830;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=AL42_RS07830;old_locus_tag=AL42_00424 NZ_KK316784.1 Protein Homology CDS 495627 496613 . - 0 ID=cds-WP_003900142.1;Parent=gene-AL42_RS07830;Dbxref=GenBank:WP_003900142.1;Name=WP_003900142.1;gbkey=CDS;gene=glnH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214925.1;locus_tag=AL42_RS07830;product=glutamate ABC transporter substrate-binding protein;protein_id=WP_003900142.1;transl_table=11 NZ_KK316784.1 RefSeq gene 496613 497932 . - . ID=gene-AL42_RS07835;Name=glnX;gbkey=Gene;gene=glnX;gene_biotype=protein_coding;locus_tag=AL42_RS07835;old_locus_tag=AL42_00425 NZ_KK316784.1 Protein Homology CDS 496613 497932 . - 0 ID=cds-WP_031721784.1;Parent=gene-AL42_RS07835;Dbxref=GenBank:WP_031721784.1;Name=WP_031721784.1;gbkey=CDS;gene=glnX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214926.1;locus_tag=AL42_RS07835;product=protein kinase G-activating protein GlnX;protein_id=WP_031721784.1;transl_table=11 NZ_KK316784.1 RefSeq gene 498059 498679 . + . ID=gene-AL42_RS07840;Name=AL42_RS07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07840;old_locus_tag=AL42_00426 NZ_KK316784.1 Protein Homology CDS 498059 498679 . + 0 ID=cds-WP_003898441.1;Parent=gene-AL42_RS07840;Dbxref=GenBank:WP_003898441.1;Name=WP_003898441.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898441.1;locus_tag=AL42_RS07840;product=NUDIX hydrolase;protein_id=WP_003898441.1;transl_table=11 NZ_KK316784.1 RefSeq gene 498663 499331 . - . ID=gene-AL42_RS07845;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=AL42_RS07845;old_locus_tag=AL42_00427 NZ_KK316784.1 Protein Homology CDS 498663 499331 . - 0 ID=cds-WP_003402115.1;Parent=gene-AL42_RS07845;Dbxref=GenBank:WP_003402115.1;Name=WP_003402115.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214928.1;locus_tag=AL42_RS07845;product=thiamine phosphate synthase;protein_id=WP_003402115.1;transl_table=11 NZ_KK316784.1 cmsearch riboswitch 499360 499470 . + . ID=id-NZ_KK316784.1:499360..499470;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_KK316784.1 RefSeq gene 499461 500483 . + . ID=gene-AL42_RS07850;Name=thiO;gbkey=Gene;gene=thiO;gene_biotype=protein_coding;locus_tag=AL42_RS07850;old_locus_tag=AL42_00428 NZ_KK316784.1 Protein Homology CDS 499461 500483 . + 0 ID=cds-WP_003402118.1;Parent=gene-AL42_RS07850;Dbxref=GenBank:WP_003402118.1;Name=WP_003402118.1;Ontology_term=GO:0016647,GO:0050660;gbkey=CDS;gene=thiO;go_function=oxidoreductase activity%2C acting on the CH-NH group of donors%2C oxygen as acceptor|0016647||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214929.1;locus_tag=AL42_RS07850;product=glycine oxidase ThiO;protein_id=WP_003402118.1;transl_table=11 NZ_KK316784.1 RefSeq gene 500480 500686 . + . ID=gene-AL42_RS07855;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=AL42_RS07855;old_locus_tag=AL42_00429 NZ_KK316784.1 Protein Homology CDS 500480 500686 . + 0 ID=cds-WP_003402121.1;Parent=gene-AL42_RS07855;Dbxref=GenBank:WP_003402121.1;Name=WP_003402121.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214930.1;locus_tag=AL42_RS07855;product=sulfur carrier protein ThiS;protein_id=WP_003402121.1;transl_table=11 NZ_KK316784.1 RefSeq gene 500679 501437 . + . ID=gene-AL42_RS07860;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=AL42_RS07860;old_locus_tag=AL42_00430 NZ_KK316784.1 Protein Homology CDS 500679 501437 . + 0 ID=cds-WP_003402126.1;Parent=gene-AL42_RS07860;Dbxref=GenBank:WP_003402126.1;Name=WP_003402126.1;gbkey=CDS;gene=thiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214931.1;locus_tag=AL42_RS07860;product=thiazole synthase;protein_id=WP_003402126.1;transl_table=11 NZ_KK316784.1 RefSeq gene 501459 501611 . + . ID=gene-AL42_RS25455;Name=AL42_RS25455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS25455 NZ_KK316784.1 Protein Homology CDS 501459 501611 . + 0 ID=cds-WP_003402129.1;Parent=gene-AL42_RS25455;Dbxref=GenBank:WP_003402129.1;Name=WP_003402129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003402129.1;locus_tag=AL42_RS25455;product=DUF2752 domain-containing protein;protein_id=WP_003402129.1;transl_table=11 NZ_KK316784.1 RefSeq gene 501809 503311 . + . ID=gene-AL42_RS07865;Name=lpqL;gbkey=Gene;gene=lpqL;gene_biotype=protein_coding;locus_tag=AL42_RS07865;old_locus_tag=AL42_00431 NZ_KK316784.1 Protein Homology CDS 501809 503311 . + 0 ID=cds-WP_003402133.1;Parent=gene-AL42_RS07865;Dbxref=GenBank:WP_003402133.1;Name=WP_003402133.1;gbkey=CDS;gene=lpqL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214932.1;locus_tag=AL42_RS07865;product=M28 family metallopeptidase;protein_id=WP_003402133.1;transl_table=11 NZ_KK316784.1 RefSeq gene 503399 504895 . + . ID=gene-AL42_RS07870;Name=lpqM;gbkey=Gene;gene=lpqM;gene_biotype=protein_coding;locus_tag=AL42_RS07870;old_locus_tag=AL42_00432 NZ_KK316784.1 Protein Homology CDS 503399 504895 . + 0 ID=cds-WP_003402135.1;Parent=gene-AL42_RS07870;Dbxref=GenBank:WP_003402135.1;Name=WP_003402135.1;gbkey=CDS;gene=lpqM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214933.1;locus_tag=AL42_RS07870;product=neutral zinc metallopeptidase;protein_id=WP_003402135.1;transl_table=11 NZ_KK316784.1 RefSeq gene 504874 505215 . - . ID=gene-AL42_RS07875;Name=AL42_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07875;old_locus_tag=AL42_00433 NZ_KK316784.1 Protein Homology CDS 504874 505215 . - 0 ID=cds-WP_003911201.1;Parent=gene-AL42_RS07875;Dbxref=GenBank:WP_003911201.1;Name=WP_003911201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911201.1;locus_tag=AL42_RS07875;product=hypothetical protein;protein_id=WP_003911201.1;transl_table=11 NZ_KK316784.1 RefSeq gene 505444 506073 . - . ID=gene-AL42_RS07880;Name=AL42_RS07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07880;old_locus_tag=AL42_00434 NZ_KK316784.1 Protein Homology CDS 505444 506073 . - 0 ID=cds-WP_003402145.1;Parent=gene-AL42_RS07880;Dbxref=GenBank:WP_003402145.1;Name=WP_003402145.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214935.1;locus_tag=AL42_RS07880;product=alpha/beta hydrolase family protein;protein_id=WP_003402145.1;transl_table=11 NZ_KK316784.1 RefSeq gene 506070 506897 . - . ID=gene-AL42_RS07885;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=AL42_RS07885;old_locus_tag=AL42_00435 NZ_KK316784.1 Protein Homology CDS 506070 506897 . - 0 ID=cds-WP_003898443.1;Parent=gene-AL42_RS07885;Dbxref=GenBank:WP_003898443.1;Name=WP_003898443.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898443.1;locus_tag=AL42_RS07885;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_003898443.1;transl_table=11 NZ_KK316784.1 RefSeq gene 506894 508537 . - . ID=gene-AL42_RS07890;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=AL42_RS07890;old_locus_tag=AL42_00436 NZ_KK316784.1 Protein Homology CDS 506894 508537 . - 0 ID=cds-WP_003900143.1;Parent=gene-AL42_RS07890;Dbxref=GenBank:WP_003900143.1;Name=WP_003900143.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214937.1;locus_tag=AL42_RS07890;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_003900143.1;transl_table=11 NZ_KK316784.1 cmsearch riboswitch 508528 508638 . - . ID=id-NZ_KK316784.1:508528..508638;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_KK316784.1 RefSeq gene 508689 508964 . - . ID=gene-AL42_RS07895;Name=AL42_RS07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07895;old_locus_tag=AL42_00437 NZ_KK316784.1 Protein Homology CDS 508689 508964 . - 0 ID=cds-WP_003402157.1;Parent=gene-AL42_RS07895;Dbxref=GenBank:WP_003402157.1;Name=WP_003402157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214938.1;locus_tag=AL42_RS07895;product=hypothetical protein;protein_id=WP_003402157.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 508863 509105 . + . ID=gene-AL42_RS27870;Name=AL42_RS27870;end_range=509105,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS27870;partial=true;pseudo=true NZ_KK316784.1 Protein Homology CDS 508863 509105 . + 0 ID=cds-AL42_RS27870;Parent=gene-AL42_RS27870;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=509105,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040653.1;locus_tag=AL42_RS27870;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 509014 513633 . - . ID=gene-AL42_RS27875;Name=ctpH;gbkey=Gene;gene=ctpH;gene_biotype=protein_coding;locus_tag=AL42_RS27875;old_locus_tag=AL42_00438 NZ_KK316784.1 Protein Homology CDS 509014 513633 . - 0 ID=cds-WP_003898445.1;Parent=gene-AL42_RS27875;Dbxref=GenBank:WP_003898445.1;Name=WP_003898445.1;Ontology_term=GO:0005215,GO:0005524,GO:0016887,GO:0016020;gbkey=CDS;gene=ctpH;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214939.1;locus_tag=AL42_RS27875;product=cation-translocating P-type ATPase;protein_id=WP_003898445.1;transl_table=11 NZ_KK316784.1 RefSeq gene 513685 514128 . - . ID=gene-AL42_RS07905;Name=AL42_RS07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07905;old_locus_tag=AL42_00439 NZ_KK316784.1 Protein Homology CDS 513685 514128 . - 0 ID=cds-WP_003402171.1;Parent=gene-AL42_RS07905;Dbxref=GenBank:WP_003402171.1;Name=WP_003402171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214940.1;locus_tag=AL42_RS07905;product=hypothetical protein;protein_id=WP_003402171.1;transl_table=11 NZ_KK316784.1 RefSeq gene 514329 515135 . - . ID=gene-AL42_RS07910;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=AL42_RS07910;old_locus_tag=AL42_00440 NZ_KK316784.1 Protein Homology CDS 514329 515135 . - 0 ID=cds-WP_031351974.1;Parent=gene-AL42_RS07910;Dbxref=GenBank:WP_031351974.1;Name=WP_031351974.1;Ontology_term=GO:0006281,GO:0004518;gbkey=CDS;gene=xthA;go_function=nuclease activity|0004518||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004571494.1;locus_tag=AL42_RS07910;product=exodeoxyribonuclease III;protein_id=WP_031351974.1;transl_table=11 NZ_KK316784.1 RefSeq gene 515207 516115 . - . ID=gene-AL42_RS07915;Name=AL42_RS07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07915;old_locus_tag=AL42_00441 NZ_KK316784.1 Protein Homology CDS 515207 516115 . - 0 ID=cds-WP_003402179.1;Parent=gene-AL42_RS07915;Dbxref=GenBank:WP_003402179.1;Name=WP_003402179.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;go_function=L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214942.1;locus_tag=AL42_RS07915;product=N-acetylglutamate synthase%2C CG3035 family;protein_id=WP_003402179.1;transl_table=11 NZ_KK316784.1 RefSeq gene 516115 516708 . - . ID=gene-AL42_RS07920;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=AL42_RS07920;old_locus_tag=AL42_00442 NZ_KK316784.1 Protein Homology CDS 516115 516708 . - 0 ID=cds-WP_003402185.1;Parent=gene-AL42_RS07920;Dbxref=GenBank:WP_003402185.1;Name=WP_003402185.1;Ontology_term=GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214943.1;locus_tag=AL42_RS07920;product=peptide deformylase;protein_id=WP_003402185.1;transl_table=11 NZ_KK316784.1 RefSeq gene 517045 517353 . + . ID=gene-AL42_RS07925;Name=AL42_RS07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07925;old_locus_tag=AL42_00443 NZ_KK316784.1 Protein Homology CDS 517045 517353 . + 0 ID=cds-WP_003402188.1;Parent=gene-AL42_RS07925;Dbxref=GenBank:WP_003402188.1;Name=WP_003402188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214944.1;locus_tag=AL42_RS07925;product=DUF3263 domain-containing protein;protein_id=WP_003402188.1;transl_table=11 NZ_KK316784.1 RefSeq gene 517406 517879 . + . ID=gene-AL42_RS07930;Name=AL42_RS07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07930;old_locus_tag=AL42_00444 NZ_KK316784.1 Protein Homology CDS 517406 517879 . + 0 ID=cds-WP_009938812.1;Parent=gene-AL42_RS07930;Dbxref=GenBank:WP_009938812.1;Name=WP_009938812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003873789.1;locus_tag=AL42_RS07930;product=vesiculogenesis/immune response regulator VirR;protein_id=WP_009938812.1;transl_table=11 NZ_KK316784.1 RefSeq gene 517912 518634 . + . ID=gene-AL42_RS07935;Name=sodC;gbkey=Gene;gene=sodC;gene_biotype=protein_coding;locus_tag=AL42_RS07935;old_locus_tag=AL42_00445 NZ_KK316784.1 Protein Homology CDS 517912 518634 . + 0 ID=cds-WP_003402198.1;Parent=gene-AL42_RS07935;Dbxref=GenBank:WP_003402198.1;Name=WP_003402198.1;Ontology_term=GO:0004784,GO:0005507;gbkey=CDS;gene=sodC;go_function=superoxide dismutase activity|0004784||IEA,copper ion binding|0005507||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214946.1;locus_tag=AL42_RS07935;product=superoxide dismutase[Cu-Zn];protein_id=WP_003402198.1;transl_table=11 NZ_KK316784.1 RefSeq gene 518636 519766 . + . ID=gene-AL42_RS07940;Name=AL42_RS07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07940;old_locus_tag=AL42_00446 NZ_KK316784.1 Protein Homology CDS 518636 519766 . + 0 ID=cds-WP_003900145.1;Parent=gene-AL42_RS07940;Dbxref=GenBank:WP_003900145.1;Name=WP_003900145.1;Ontology_term=GO:0042398,GO:0004357;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214947.1;locus_tag=AL42_RS07940;product=glutamate--cysteine ligase;protein_id=WP_003900145.1;transl_table=11 NZ_KK316784.1 RefSeq gene 519826 520479 . + . ID=gene-AL42_RS07945;Name=AL42_RS07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07945;old_locus_tag=AL42_00447 NZ_KK316784.1 Protein Homology CDS 519826 520479 . + 0 ID=cds-WP_003900146.1;Parent=gene-AL42_RS07945;Dbxref=GenBank:WP_003900146.1;Name=WP_003900146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214948.1;locus_tag=AL42_RS07945;product=LON peptidase substrate-binding domain-containing protein;protein_id=WP_003900146.1;transl_table=11 NZ_KK316784.1 RefSeq gene 520659 522845 . - . ID=gene-AL42_RS07950;Name=AL42_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07950;old_locus_tag=AL42_00448 NZ_KK316784.1 Protein Homology CDS 520659 522845 . - 0 ID=cds-WP_003402206.1;Parent=gene-AL42_RS07950;Dbxref=GenBank:WP_003402206.1;Name=WP_003402206.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214949.1;locus_tag=AL42_RS07950;product=AAA family ATPase;protein_id=WP_003402206.1;transl_table=11 NZ_KK316784.1 RefSeq gene 522842 523702 . - . ID=gene-AL42_RS07955;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=AL42_RS07955;old_locus_tag=AL42_00449 NZ_KK316784.1 Protein Homology CDS 522842 523702 . - 0 ID=cds-WP_003402213.1;Parent=gene-AL42_RS07955;Dbxref=GenBank:WP_003402213.1;Name=WP_003402213.1;Ontology_term=GO:0008654,GO:0003882;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-serine O-phosphatidyltransferase activity|0003882||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214950.1;locus_tag=AL42_RS07955;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_003402213.1;transl_table=11 NZ_KK316784.1 RefSeq gene 523699 524394 . - . ID=gene-AL42_RS07960;Name=psd;gbkey=Gene;gene=psd;gene_biotype=protein_coding;locus_tag=AL42_RS07960;old_locus_tag=AL42_00450 NZ_KK316784.1 Protein Homology CDS 523699 524394 . - 0 ID=cds-WP_003402216.1;Parent=gene-AL42_RS07960;Dbxref=GenBank:WP_003402216.1;Name=WP_003402216.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=psd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214951.1;locus_tag=AL42_RS07960;product=phosphatidylserine decarboxylase;protein_id=WP_003402216.1;transl_table=11 NZ_KK316784.1 RefSeq gene 524455 525672 . - . ID=gene-AL42_RS07965;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=AL42_RS07965;old_locus_tag=AL42_00451 NZ_KK316784.1 Protein Homology CDS 524455 525672 . - 0 ID=cds-WP_003898451.1;Parent=gene-AL42_RS07965;Dbxref=GenBank:WP_003898451.1;Name=WP_003898451.1;Ontology_term=GO:0032324,GO:0061599;gbkey=CDS;gene=moeA;go_function=molybdopterin molybdotransferase activity|0061599||IEA;go_process=molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177725.1;locus_tag=AL42_RS07965;product=molybdopterin molybdotransferase MoeA;protein_id=WP_003898451.1;transl_table=11 NZ_KK316784.1 RefSeq gene 525691 526626 . - . ID=gene-AL42_RS07970;Name=AL42_RS07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07970;old_locus_tag=AL42_00452 NZ_KK316784.1 Protein Homology CDS 525691 526626 . - 0 ID=cds-WP_003402219.1;Parent=gene-AL42_RS07970;Dbxref=GenBank:WP_003402219.1;Name=WP_003402219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214953.1;locus_tag=AL42_RS07970;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_003402219.1;transl_table=11 NZ_KK316784.1 RefSeq gene 526920 528542 . + . ID=gene-AL42_RS07975;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=AL42_RS07975;old_locus_tag=AL42_00453 NZ_KK316784.1 Protein Homology CDS 526920 528542 . + 0 ID=cds-WP_003402236.1;Parent=gene-AL42_RS07975;Dbxref=GenBank:WP_003402236.1;Name=WP_003402236.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214954.1;locus_tag=AL42_RS07975;product=chaperonin GroEL;protein_id=WP_003402236.1;transl_table=11 NZ_KK316784.1 RefSeq gene 528608 529036 . - . ID=gene-AL42_RS07980;Name=AL42_RS07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07980;old_locus_tag=AL42_00454 NZ_KK316784.1 Protein Homology CDS 528608 529036 . - 0 ID=cds-WP_003402238.1;Parent=gene-AL42_RS07980;Dbxref=GenBank:WP_003402238.1;Name=WP_003402238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214955.1;locus_tag=AL42_RS07980;product=hypothetical protein;protein_id=WP_003402238.1;transl_table=11 NZ_KK316784.1 RefSeq gene 529063 530526 . - . ID=gene-AL42_RS07985;Name=AL42_RS07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07985;old_locus_tag=AL42_00455 NZ_KK316784.1 Protein Homology CDS 529063 530526 . - 0 ID=cds-WP_031721785.1;Parent=gene-AL42_RS07985;Dbxref=GenBank:WP_031721785.1;Name=WP_031721785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177726.2;locus_tag=AL42_RS07985;product=PPE family protein;protein_id=WP_031721785.1;transl_table=11 NZ_KK316784.1 RefSeq gene 530708 531223 . + . ID=gene-AL42_RS07990;Name=AL42_RS07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS07990;old_locus_tag=AL42_00456 NZ_KK316784.1 Protein Homology CDS 530708 531223 . + 0 ID=cds-WP_003402240.1;Parent=gene-AL42_RS07990;Dbxref=GenBank:WP_003402240.1;Name=WP_003402240.1;Ontology_term=GO:0010127,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=mycothiol-dependent detoxification|0010127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214957.1;locus_tag=AL42_RS07990;product=mycothiol transferase;protein_id=WP_003402240.1;transl_table=11 NZ_KK316784.1 RefSeq gene 531403 532101 . - . ID=gene-AL42_RS07995;Name=rskA;gbkey=Gene;gene=rskA;gene_biotype=protein_coding;locus_tag=AL42_RS07995;old_locus_tag=AL42_00457 NZ_KK316784.1 Protein Homology CDS 531403 532101 . - 0 ID=cds-WP_003905315.1;Parent=gene-AL42_RS07995;Dbxref=GenBank:WP_003905315.1;Name=WP_003905315.1;gbkey=CDS;gene=rskA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214958.1;locus_tag=AL42_RS07995;product=anti-sigma-K factor RskA;protein_id=WP_003905315.1;transl_table=11 NZ_KK316784.1 RefSeq gene 532145 532708 . - . ID=gene-AL42_RS08000;Name=sigK;gbkey=Gene;gene=sigK;gene_biotype=protein_coding;locus_tag=AL42_RS08000;old_locus_tag=AL42_00458 NZ_KK316784.1 Protein Homology CDS 532145 532708 . - 0 ID=cds-WP_003402246.1;Parent=gene-AL42_RS08000;Dbxref=GenBank:WP_003402246.1;Name=WP_003402246.1;gbkey=CDS;gene=sigK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214959.1;locus_tag=AL42_RS08000;product=sigma-70 family RNA polymerase sigma factor SigK;protein_id=WP_003402246.1;transl_table=11 NZ_KK316784.1 RefSeq gene 532757 533527 . - . ID=gene-AL42_RS08005;Name=AL42_RS08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08005;old_locus_tag=AL42_00459 NZ_KK316784.1 Protein Homology CDS 532757 533527 . - 0 ID=cds-WP_003402248.1;Parent=gene-AL42_RS08005;Dbxref=GenBank:WP_003402248.1;Name=WP_003402248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214960.1;locus_tag=AL42_RS08005;product=DUF1295 domain-containing protein;protein_id=WP_003402248.1;transl_table=11 NZ_KK316784.1 RefSeq gene 533536 534819 . - . ID=gene-AL42_RS08010;Name=AL42_RS08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08010;old_locus_tag=AL42_00460 NZ_KK316784.1 Protein Homology CDS 533536 534819 . - 0 ID=cds-WP_003402250.1;Parent=gene-AL42_RS08010;Dbxref=GenBank:WP_003402250.1;Name=WP_003402250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214961.1;locus_tag=AL42_RS08010;product=cyclopropane-fatty-acyl-phospholipid synthase family protein;protein_id=WP_003402250.1;transl_table=11 NZ_KK316784.1 RefSeq gene 534816 535547 . - . ID=gene-AL42_RS08015;Name=AL42_RS08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08015;old_locus_tag=AL42_00461 NZ_KK316784.1 Protein Homology CDS 534816 535547 . - 0 ID=cds-WP_003900930.1;Parent=gene-AL42_RS08015;Dbxref=GenBank:WP_003900930.1;Name=WP_003900930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900930.1;locus_tag=AL42_RS08015;product=DUF1365 domain-containing protein;protein_id=WP_003900930.1;transl_table=11 NZ_KK316784.1 RefSeq gene 535541 536860 . - . ID=gene-AL42_RS08020;Name=AL42_RS08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08020;old_locus_tag=AL42_00462 NZ_KK316784.1 Protein Homology CDS 535541 536860 . - 0 ID=cds-WP_003402268.1;Parent=gene-AL42_RS08020;Dbxref=GenBank:WP_003402268.1;Name=WP_003402268.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214963.1;locus_tag=AL42_RS08020;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_003402268.1;transl_table=11 NZ_KK316784.1 RefSeq gene 536900 539803 . - . ID=gene-AL42_RS08025;Name=mmpL4;gbkey=Gene;gene=mmpL4;gene_biotype=protein_coding;locus_tag=AL42_RS08025;old_locus_tag=AL42_00463 NZ_KK316784.1 Protein Homology CDS 536900 539803 . - 0 ID=cds-WP_003898458.1;Parent=gene-AL42_RS08025;Dbxref=GenBank:WP_003898458.1;Name=WP_003898458.1;gbkey=CDS;gene=mmpL4;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898458.1;locus_tag=AL42_RS08025;product=siderophore RND transporter MmpL4;protein_id=WP_003898458.1;transl_table=11 NZ_KK316784.1 RefSeq gene 539800 540222 . - . ID=gene-AL42_RS08030;Name=mmpS4;gbkey=Gene;gene=mmpS4;gene_biotype=protein_coding;locus_tag=AL42_RS08030;old_locus_tag=AL42_00464 NZ_KK316784.1 Protein Homology CDS 539800 540222 . - 0 ID=cds-WP_003402272.1;Parent=gene-AL42_RS08030;Dbxref=GenBank:WP_003402272.1;Name=WP_003402272.1;gbkey=CDS;gene=mmpS4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214965.1;locus_tag=AL42_RS08030;product=siderophore RND transporter accessory protein MmpS4;protein_id=WP_003402272.1;transl_table=11 NZ_KK316784.1 RefSeq gene 540454 541164 . + . ID=gene-AL42_RS08035;Name=AL42_RS08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08035;old_locus_tag=AL42_00465 NZ_KK316784.1 Protein Homology CDS 540454 541164 . + 0 ID=cds-WP_003905317.1;Parent=gene-AL42_RS08035;Dbxref=GenBank:WP_003905317.1;Name=WP_003905317.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214966.1;locus_tag=AL42_RS08035;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003905317.1;transl_table=11 NZ_KK316784.1 RefSeq gene 541486 543042 . + . ID=gene-AL42_RS08040;Name=AL42_RS08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08040;old_locus_tag=AL42_00466 NZ_KK316784.1 Protein Homology CDS 541486 543042 . + 0 ID=cds-WP_003402284.1;Parent=gene-AL42_RS08040;Dbxref=GenBank:WP_003402284.1;Name=WP_003402284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177727.1;locus_tag=AL42_RS08040;product=PPE family protein;protein_id=WP_003402284.1;transl_table=11 NZ_KK316784.1 RefSeq gene 543048 543371 . - . ID=gene-AL42_RS27105;Name=AL42_RS27105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27105 NZ_KK316784.1 Protein Homology CDS 543048 543371 . - 0 ID=cds-WP_003898461.1;Parent=gene-AL42_RS27105;Dbxref=GenBank:WP_003898461.1;Name=WP_003898461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898461.1;locus_tag=AL42_RS27105;product=hypothetical protein;protein_id=WP_003898461.1;transl_table=11 NZ_KK316784.1 RefSeq gene 543687 544133 . - . ID=gene-AL42_RS08045;Name=AL42_RS08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08045;old_locus_tag=AL42_00468 NZ_KK316784.1 Protein Homology CDS 543687 544133 . - 0 ID=cds-WP_003402286.1;Parent=gene-AL42_RS08045;Dbxref=GenBank:WP_003402286.1;Name=WP_003402286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214969.1;locus_tag=AL42_RS08045;product=DUF5078 domain-containing protein;protein_id=WP_003402286.1;transl_table=11 NZ_KK316784.1 RefSeq gene 544201 545115 . - . ID=gene-AL42_RS08050;Name=AL42_RS08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08050;old_locus_tag=AL42_00469 NZ_KK316784.1 Protein Homology CDS 544201 545115 . - 0 ID=cds-WP_003898463.1;Parent=gene-AL42_RS08050;Dbxref=GenBank:WP_003898463.1;Name=WP_003898463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214970.1;locus_tag=AL42_RS08050;product=crotonase/enoyl-CoA hydratase family protein;protein_id=WP_003898463.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 545347 545669 . - . ID=gene-AL42_RS08055;Name=AL42_RS08055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS08055;old_locus_tag=AL42_00470;pseudo=true NZ_KK316784.1 Protein Homology CDS 545347 545669 . - 0 ID=cds-AL42_RS08055;Parent=gene-AL42_RS08055;Note=frameshifted;Ontology_term=GO:0006402,GO:0016075,GO:0003677,GO:0003723,GO:0004521;gbkey=CDS;go_function=DNA binding|0003677||IEA,RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;go_process=mRNA catabolic process|0006402||IEA,rRNA catabolic process|0016075||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013831006.1;locus_tag=AL42_RS08055;product=type II toxin-antitoxin system PemK/MazF family toxin;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 545656 545829 . - . ID=gene-AL42_RS08060;Name=AL42_RS08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08060;old_locus_tag=AL42_00471 NZ_KK316784.1 Protein Homology CDS 545656 545829 . - 0 ID=cds-WP_003903009.1;Parent=gene-AL42_RS08060;Dbxref=GenBank:WP_003903009.1;Name=WP_003903009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007409102.1;locus_tag=AL42_RS08060;product=antitoxin MazE;protein_id=WP_003903009.1;transl_table=11 NZ_KK316784.1 RefSeq gene 545898 547919 . - . ID=gene-AL42_RS08065;Name=AL42_RS08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08065;old_locus_tag=AL42_00472 NZ_KK316784.1 Protein Homology CDS 545898 547919 . - 0 ID=cds-WP_009940441.1;Parent=gene-AL42_RS08065;Dbxref=GenBank:WP_009940441.1;Name=WP_009940441.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214971.1;locus_tag=AL42_RS08065;product=prolyl oligopeptidase family serine peptidase;protein_id=WP_009940441.1;transl_table=11 NZ_KK316784.1 RefSeq gene 547987 549510 . + . ID=gene-AL42_RS08070;Name=exaC;gbkey=Gene;gene=exaC;gene_biotype=protein_coding;locus_tag=AL42_RS08070;old_locus_tag=AL42_00473 NZ_KK316784.1 Protein Homology CDS 547987 549510 . + 0 ID=cds-WP_003402294.1;Parent=gene-AL42_RS08070;Dbxref=GenBank:WP_003402294.1;Name=WP_003402294.1;Ontology_term=GO:0006068,GO:0004029;gbkey=CDS;gene=exaC;go_function=aldehyde dehydrogenase (NAD+) activity|0004029||IEA;go_process=ethanol catabolic process|0006068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214972.1;locus_tag=AL42_RS08070;product=acetaldehyde dehydrogenase ExaC;protein_id=WP_003402294.1;transl_table=11 NZ_KK316784.1 RefSeq gene 549510 550001 . + . ID=gene-AL42_RS08075;Name=AL42_RS08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08075;old_locus_tag=AL42_00474 NZ_KK316784.1 Protein Homology CDS 549510 550001 . + 0 ID=cds-WP_003898464.1;Parent=gene-AL42_RS08075;Dbxref=GenBank:WP_003898464.1;Name=WP_003898464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214973.1;locus_tag=AL42_RS08075;product=DUF779 domain-containing protein;protein_id=WP_003898464.1;transl_table=11 NZ_KK316784.1 RefSeq gene 550022 550300 . + . ID=gene-AL42_RS08080;Name=AL42_RS08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08080;old_locus_tag=AL42_00475 NZ_KK316784.1 Protein Homology CDS 550022 550300 . + 0 ID=cds-WP_003898465.1;Parent=gene-AL42_RS08080;Dbxref=GenBank:WP_003898465.1;Name=WP_003898465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015626659.1;locus_tag=AL42_RS08080;product=putative holin;protein_id=WP_003898465.1;transl_table=11 NZ_KK316784.1 RefSeq gene 550293 550862 . + . ID=gene-AL42_RS08085;Name=AL42_RS08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08085;old_locus_tag=AL42_00476 NZ_KK316784.1 Protein Homology CDS 550293 550862 . + 0 ID=cds-WP_003898466.1;Parent=gene-AL42_RS08085;Dbxref=GenBank:WP_003898466.1;Name=WP_003898466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898466.1;locus_tag=AL42_RS08085;product=hypothetical protein;protein_id=WP_003898466.1;transl_table=11 NZ_KK316784.1 RefSeq gene 550926 552320 . + . ID=gene-AL42_RS08090;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=AL42_RS08090;old_locus_tag=AL42_00477 NZ_KK316784.1 Protein Homology CDS 550926 552320 . + 0 ID=cds-WP_003402301.1;Parent=gene-AL42_RS08090;Dbxref=GenBank:WP_003402301.1;Name=WP_003402301.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214976.1;locus_tag=AL42_RS08090;product=dihydrolipoyl dehydrogenase;protein_id=WP_003402301.1;transl_table=11 NZ_KK316784.1 RefSeq gene 552328 552621 . + . ID=gene-AL42_RS08095;Name=AL42_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08095;old_locus_tag=AL42_00478 NZ_KK316784.1 Protein Homology CDS 552328 552621 . + 0 ID=cds-WP_003402304.1;Parent=gene-AL42_RS08095;Dbxref=GenBank:WP_003402304.1;Name=WP_003402304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214977.1;locus_tag=AL42_RS08095;product=hypothetical protein;protein_id=WP_003402304.1;transl_table=11 NZ_KK316784.1 RefSeq gene 552625 553197 . - . ID=gene-AL42_RS08100;Name=AL42_RS08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08100;old_locus_tag=AL42_00479 NZ_KK316784.1 Protein Homology CDS 552625 553197 . - 0 ID=cds-WP_003402306.1;Parent=gene-AL42_RS08100;Dbxref=GenBank:WP_003402306.1;Name=WP_003402306.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214978.1;locus_tag=AL42_RS08100;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_003402306.1;transl_table=11 NZ_KK316784.1 RefSeq gene 553194 554618 . - . ID=gene-AL42_RS08105;Name=ramB;gbkey=Gene;gene=ramB;gene_biotype=protein_coding;locus_tag=AL42_RS08105;old_locus_tag=AL42_00480 NZ_KK316784.1 Protein Homology CDS 553194 554618 . - 0 ID=cds-WP_003900935.1;Parent=gene-AL42_RS08105;Dbxref=GenBank:WP_003900935.1;Name=WP_003900935.1;gbkey=CDS;gene=ramB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214979.1;locus_tag=AL42_RS08105;product=acetate metabolism transcriptional regulator RamB;protein_id=WP_003900935.1;transl_table=11 NZ_KK316784.1 RefSeq gene 554770 555564 . + . ID=gene-AL42_RS08110;Name=AL42_RS08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08110;old_locus_tag=AL42_00481 NZ_KK316784.1 Protein Homology CDS 554770 555564 . + 0 ID=cds-WP_003402311.1;Parent=gene-AL42_RS08110;Dbxref=GenBank:WP_003402311.1;Name=WP_003402311.1;Ontology_term=GO:0006633,GO:0016790;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214980.1;locus_tag=AL42_RS08110;product=acyl-[acyl-carrier-protein] thioesterase;protein_id=WP_003402311.1;transl_table=11 NZ_KK316784.1 RefSeq gene 555839 557125 . + . ID=gene-AL42_RS08115;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=AL42_RS08115;old_locus_tag=AL42_00482 NZ_KK316784.1 Protein Homology CDS 555839 557125 . + 0 ID=cds-WP_003402316.1;Parent=gene-AL42_RS08115;Dbxref=GenBank:WP_003402316.1;Name=WP_003402316.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177728.1;locus_tag=AL42_RS08115;product=isocitrate lyase;protein_id=WP_003402316.1;transl_table=11 NZ_KK316784.1 RefSeq gene 557207 558067 . + . ID=gene-AL42_RS08120;Name=fadB2;gbkey=Gene;gene=fadB2;gene_biotype=protein_coding;locus_tag=AL42_RS08120;old_locus_tag=AL42_00483 NZ_KK316784.1 Protein Homology CDS 557207 558067 . + 0 ID=cds-WP_003402318.1;Parent=gene-AL42_RS08120;Dbxref=GenBank:WP_003402318.1;Name=WP_003402318.1;gbkey=CDS;gene=fadB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214982.1;locus_tag=AL42_RS08120;product=3-hydroxybutyryl-CoA dehydrogenase FadB2;protein_id=WP_003402318.1;transl_table=11 NZ_KK316784.1 RefSeq gene 558200 559060 . + . ID=gene-AL42_RS08125;Name=umaA;gbkey=Gene;gene=umaA;gene_biotype=protein_coding;locus_tag=AL42_RS08125;old_locus_tag=AL42_00484 NZ_KK316784.1 Protein Homology CDS 558200 559060 . + 0 ID=cds-WP_003900153.1;Parent=gene-AL42_RS08125;Dbxref=GenBank:WP_003900153.1;Name=WP_003900153.1;gbkey=CDS;gene=umaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177729.1;locus_tag=AL42_RS08125;product=SAM-dependent methyltransferase UmaA;protein_id=WP_003900153.1;transl_table=11 NZ_KK316784.1 RefSeq gene 559160 560023 . - . ID=gene-AL42_RS08130;Name=pcaA;gbkey=Gene;gene=pcaA;gene_biotype=protein_coding;locus_tag=AL42_RS08130;old_locus_tag=AL42_00485 NZ_KK316784.1 Protein Homology CDS 559160 560023 . - 0 ID=cds-WP_031721786.1;Parent=gene-AL42_RS08130;Dbxref=GenBank:WP_031721786.1;Name=WP_031721786.1;gbkey=CDS;gene=pcaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177730.1;locus_tag=AL42_RS08130;product=cyclopropane mycolic acid synthase PcaA;protein_id=WP_031721786.1;transl_table=11 NZ_KK316784.1 RefSeq gene 560166 560606 . - . ID=gene-AL42_RS08135;Name=AL42_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08135;old_locus_tag=AL42_00486 NZ_KK316784.1 Protein Homology CDS 560166 560606 . - 0 ID=cds-WP_003898470.1;Parent=gene-AL42_RS08135;Dbxref=GenBank:WP_003898470.1;Name=WP_003898470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177622.1;locus_tag=AL42_RS08135;product=UbiA prenyltransferase family protein;protein_id=WP_003898470.1;transl_table=11 NZ_KK316784.1 RefSeq gene 560537 561025 . - . ID=gene-AL42_RS08140;Name=AL42_RS08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08140;old_locus_tag=AL42_00487 NZ_KK316784.1 Protein Homology CDS 560537 561025 . - 0 ID=cds-WP_003402327.1;Parent=gene-AL42_RS08140;Dbxref=GenBank:WP_003402327.1;Name=WP_003402327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214985.1;locus_tag=AL42_RS08140;product=UbiA prenyltransferase family protein;protein_id=WP_003402327.1;transl_table=11 NZ_KK316784.1 RefSeq gene 561035 561739 . - . ID=gene-AL42_RS08145;Name=AL42_RS08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08145;old_locus_tag=AL42_00488 NZ_KK316784.1 Protein Homology CDS 561035 561739 . - 0 ID=cds-WP_003402330.1;Parent=gene-AL42_RS08145;Dbxref=GenBank:WP_003402330.1;Name=WP_003402330.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214986.1;locus_tag=AL42_RS08145;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003402330.1;transl_table=11 NZ_KK316784.1 RefSeq gene 561876 563246 . + . ID=gene-AL42_RS08150;Name=AL42_RS08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08150;old_locus_tag=AL42_00489 NZ_KK316784.1 Protein Homology CDS 561876 563246 . + 0 ID=cds-WP_003402332.1;Parent=gene-AL42_RS08150;Dbxref=GenBank:WP_003402332.1;Name=WP_003402332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214987.2;locus_tag=AL42_RS08150;product=DUF445 domain-containing protein;protein_id=WP_003402332.1;transl_table=11 NZ_KK316784.1 RefSeq gene 563333 563755 . + . ID=gene-AL42_RS08155;Name=AL42_RS08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08155;old_locus_tag=AL42_00490 NZ_KK316784.1 Protein Homology CDS 563333 563755 . + 0 ID=cds-WP_003402335.1;Parent=gene-AL42_RS08155;Dbxref=GenBank:WP_003402335.1;Name=WP_003402335.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214988.1;locus_tag=AL42_RS08155;product=helix-turn-helix domain-containing protein;protein_id=WP_003402335.1;transl_table=11 NZ_KK316784.1 RefSeq gene 564109 564708 . + . ID=gene-AL42_RS08160;Name=hbhA;gbkey=Gene;gene=hbhA;gene_biotype=protein_coding;locus_tag=AL42_RS08160;old_locus_tag=AL42_00491 NZ_KK316784.1 Protein Homology CDS 564109 564708 . + 0 ID=cds-WP_003402339.1;Parent=gene-AL42_RS08160;Dbxref=GenBank:WP_003402339.1;Name=WP_003402339.1;gbkey=CDS;gene=hbhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214989.1;locus_tag=AL42_RS08160;product=heparin-binding hemagglutinin HbhA;protein_id=WP_003402339.1;transl_table=11 NZ_KK316784.1 RefSeq gene 564796 565083 . + . ID=gene-AL42_RS08165;Name=AL42_RS08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08165;old_locus_tag=AL42_00492 NZ_KK316784.1 Protein Homology CDS 564796 565083 . + 0 ID=cds-WP_003898474.1;Parent=gene-AL42_RS08165;Dbxref=GenBank:WP_003898474.1;Name=WP_003898474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898474.1;locus_tag=AL42_RS08165;product=DUF2516 family protein;protein_id=WP_003898474.1;transl_table=11 NZ_KK316784.1 RefSeq gene 565088 565534 . + . ID=gene-AL42_RS08170;Name=AL42_RS08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08170;old_locus_tag=AL42_00493 NZ_KK316784.1 Protein Homology CDS 565088 565534 . + 0 ID=cds-WP_003402344.1;Parent=gene-AL42_RS08170;Dbxref=GenBank:WP_003402344.1;Name=WP_003402344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214991.1;locus_tag=AL42_RS08170;product=DUF2599 domain-containing protein;protein_id=WP_003402344.1;transl_table=11 NZ_KK316784.1 RefSeq gene 565534 566208 . + . ID=gene-AL42_RS08175;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=AL42_RS08175;old_locus_tag=AL42_00494 NZ_KK316784.1 Protein Homology CDS 565534 566208 . + 0 ID=cds-WP_003402347.1;Parent=gene-AL42_RS08175;Dbxref=GenBank:WP_003402347.1;Name=WP_003402347.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214992.1;locus_tag=AL42_RS08175;product=deoxyribose-phosphate aldolase;protein_id=WP_003402347.1;transl_table=11 NZ_KK316784.1 RefSeq gene 566233 567279 . - . ID=gene-AL42_RS08180;Name=AL42_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08180;old_locus_tag=AL42_00495 NZ_KK316784.1 Protein Homology CDS 566233 567279 . - 0 ID=cds-WP_003898475.1;Parent=gene-AL42_RS08180;Dbxref=GenBank:WP_003898475.1;Name=WP_003898475.1;Ontology_term=GO:0005543;gbkey=CDS;go_function=phospholipid binding|0005543||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214993.1;locus_tag=AL42_RS08180;product=LmeA family phospholipid-binding protein;protein_id=WP_003898475.1;transl_table=11 NZ_KK316784.1 RefSeq gene 567276 568118 . - . ID=gene-AL42_RS08185;Name=AL42_RS08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08185;old_locus_tag=AL42_00496 NZ_KK316784.1 Protein Homology CDS 567276 568118 . - 0 ID=cds-WP_003402350.1;Parent=gene-AL42_RS08185;Dbxref=GenBank:WP_003402350.1;Name=WP_003402350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214994.2;locus_tag=AL42_RS08185;product=carbon-nitrogen hydrolase family protein;protein_id=WP_003402350.1;transl_table=11 NZ_KK316784.1 RefSeq gene 568300 568824 . - . ID=gene-AL42_RS08190;Name=AL42_RS08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08190;old_locus_tag=AL42_00497 NZ_KK316784.1 Protein Homology CDS 568300 568824 . - 0 ID=cds-WP_003402351.1;Parent=gene-AL42_RS08190;Dbxref=GenBank:WP_003402351.1;Name=WP_003402351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214995.1;locus_tag=AL42_RS08190;product=DUF2505 domain-containing protein;protein_id=WP_003402351.1;transl_table=11 NZ_KK316784.1 RefSeq gene 568851 569960 . + . ID=gene-AL42_RS08195;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=AL42_RS08195;old_locus_tag=AL42_00498 NZ_KK316784.1 Protein Homology CDS 568851 569960 . + 0 ID=cds-WP_003402354.1;Parent=gene-AL42_RS08195;Dbxref=GenBank:WP_003402354.1;Name=WP_003402354.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214996.1;locus_tag=AL42_RS08195;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_003402354.1;transl_table=11 NZ_KK316784.1 RefSeq gene 570022 571377 . + . ID=gene-AL42_RS08200;Name=ldtMt5;gbkey=Gene;gene=ldtMt5;gene_biotype=protein_coding;locus_tag=AL42_RS08200;old_locus_tag=AL42_00499 NZ_KK316784.1 Protein Homology CDS 570022 571377 . + 0 ID=cds-WP_003402357.1;Parent=gene-AL42_RS08200;Dbxref=GenBank:WP_003402357.1;Name=WP_003402357.1;gbkey=CDS;gene=ldtMt5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214997.1;locus_tag=AL42_RS08200;product=L%2CD-transpeptidase LdtMt5;protein_id=WP_003402357.1;transl_table=11 NZ_KK316784.1 RefSeq gene 571358 572113 . - . ID=gene-AL42_RS08205;Name=AL42_RS08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08205;old_locus_tag=AL42_00500 NZ_KK316784.1 Protein Homology CDS 571358 572113 . - 0 ID=cds-WP_003900154.1;Parent=gene-AL42_RS08205;Dbxref=GenBank:WP_003900154.1;Name=WP_003900154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214998.1;locus_tag=AL42_RS08205;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_003900154.1;transl_table=11 NZ_KK316784.1 RefSeq gene 572296 573612 . + . ID=gene-AL42_RS08210;Name=AL42_RS08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08210;old_locus_tag=AL42_00501 NZ_KK316784.1 Protein Homology CDS 572296 573612 . + 0 ID=cds-WP_003402361.1;Parent=gene-AL42_RS08210;Dbxref=GenBank:WP_003402361.1;Name=WP_003402361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214999.1;locus_tag=AL42_RS08210;product=transcriptional regulator;protein_id=WP_003402361.1;transl_table=11 NZ_KK316784.1 RefSeq gene 573660 575102 . + . ID=gene-AL42_RS08215;Name=mshA;gbkey=Gene;gene=mshA;gene_biotype=protein_coding;locus_tag=AL42_RS08215;old_locus_tag=AL42_00502 NZ_KK316784.1 Protein Homology CDS 573660 575102 . + 0 ID=cds-WP_003905320.1;Parent=gene-AL42_RS08215;Dbxref=GenBank:WP_003905320.1;Name=WP_003905320.1;Ontology_term=GO:0010125,GO:0008375;gbkey=CDS;gene=mshA;go_function=acetylglucosaminyltransferase activity|0008375||IEA;go_process=mycothiol biosynthetic process|0010125||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215000.1;locus_tag=AL42_RS08215;product=D-inositol-3-phosphate glycosyltransferase;protein_id=WP_003905320.1;transl_table=11 NZ_KK316784.1 RefSeq gene 575099 575650 . + . ID=gene-AL42_RS08220;Name=AL42_RS08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08220;old_locus_tag=AL42_00503 NZ_KK316784.1 Protein Homology CDS 575099 575650 . + 0 ID=cds-WP_003402370.1;Parent=gene-AL42_RS08220;Dbxref=GenBank:WP_003402370.1;Name=WP_003402370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215001.1;locus_tag=AL42_RS08220;product=type III secretion system chaperone family protein;protein_id=WP_003402370.1;transl_table=11 NZ_KK316784.1 RefSeq gene 575976 576581 . + . ID=gene-AL42_RS08225;Name=lysE;gbkey=Gene;gene=lysE;gene_biotype=protein_coding;locus_tag=AL42_RS08225;old_locus_tag=AL42_00504 NZ_KK316784.1 Protein Homology CDS 575976 576581 . + 0 ID=cds-WP_003402377.1;Parent=gene-AL42_RS08225;Dbxref=GenBank:WP_003402377.1;Name=WP_003402377.1;Ontology_term=GO:0016020;gbkey=CDS;gene=lysE;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898479.1;locus_tag=AL42_RS08225;product=L-lysine exporter;protein_id=WP_003402377.1;transl_table=11 NZ_KK316784.1 RefSeq gene 576738 577487 . + . ID=gene-AL42_RS08230;Name=AL42_RS08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08230;old_locus_tag=AL42_00505 NZ_KK316784.1 Protein Homology CDS 576738 577487 . + 0 ID=cds-WP_003402379.1;Parent=gene-AL42_RS08230;Dbxref=GenBank:WP_003402379.1;Name=WP_003402379.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177731.1;locus_tag=AL42_RS08230;product=phosphoglyceromutase;protein_id=WP_003402379.1;transl_table=11 NZ_KK316784.1 RefSeq gene 577661 578893 . + . ID=gene-AL42_RS08235;Name=senX3;gbkey=Gene;gene=senX3;gene_biotype=protein_coding;locus_tag=AL42_RS08235;old_locus_tag=AL42_00506 NZ_KK316784.1 Protein Homology CDS 577661 578893 . + 0 ID=cds-WP_003402390.1;Parent=gene-AL42_RS08235;Dbxref=GenBank:WP_003402390.1;Name=WP_003402390.1;gbkey=CDS;gene=senX3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215004.1;locus_tag=AL42_RS08235;product=two-component system sensor histidine kinase SenX3;protein_id=WP_003402390.1;transl_table=11 NZ_KK316784.1 RefSeq gene 579097 579780 . + . ID=gene-AL42_RS08240;Name=regX;gbkey=Gene;gene=regX;gene_biotype=protein_coding;locus_tag=AL42_RS08240;old_locus_tag=AL42_00507 NZ_KK316784.1 Protein Homology CDS 579097 579780 . + 0 ID=cds-WP_003402393.1;Parent=gene-AL42_RS08240;Dbxref=GenBank:WP_003402393.1;Name=WP_003402393.1;gbkey=CDS;gene=regX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003402393.1;locus_tag=AL42_RS08240;product=two-component sensory transduction protein RegX;protein_id=WP_003402393.1;transl_table=11 NZ_KK316784.1 RefSeq gene 579777 581666 . - . ID=gene-AL42_RS08245;Name=AL42_RS08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08245;old_locus_tag=AL42_00508 NZ_KK316784.1 Protein Homology CDS 579777 581666 . - 0 ID=cds-WP_003910800.1;Parent=gene-AL42_RS08245;Dbxref=GenBank:WP_003910800.1;Name=WP_003910800.1;Ontology_term=GO:0016614,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215006.2;locus_tag=AL42_RS08245;product=GMC family oxidoreductase;protein_id=WP_003910800.1;transl_table=11 NZ_KK316784.1 RefSeq gene 581663 581992 . - . ID=gene-AL42_RS08250;Name=AL42_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08250;old_locus_tag=AL42_00509 NZ_KK316784.1 Protein Homology CDS 581663 581992 . - 0 ID=cds-WP_003402400.1;Parent=gene-AL42_RS08250;Dbxref=GenBank:WP_003402400.1;Name=WP_003402400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177623.1;locus_tag=AL42_RS08250;product=hypothetical protein;protein_id=WP_003402400.1;transl_table=11 NZ_KK316784.1 RefSeq gene 581989 582939 . - . ID=gene-AL42_RS08255;Name=AL42_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08255;old_locus_tag=AL42_00510 NZ_KK316784.1 Protein Homology CDS 581989 582939 . - 0 ID=cds-WP_003918084.1;Parent=gene-AL42_RS08255;Dbxref=GenBank:WP_003918084.1;Name=WP_003918084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911182.1;locus_tag=AL42_RS08255;product=hypothetical protein;protein_id=WP_003918084.1;transl_table=11 NZ_KK316784.1 RefSeq gene 582995 583711 . + . ID=gene-AL42_RS08260;Name=AL42_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08260;old_locus_tag=AL42_00511 NZ_KK316784.1 Protein Homology CDS 582995 583711 . + 0 ID=cds-WP_003898483.1;Parent=gene-AL42_RS08260;Dbxref=GenBank:WP_003898483.1;Name=WP_003898483.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898483.1;locus_tag=AL42_RS08260;product=FadR/GntR family transcriptional regulator;protein_id=WP_003898483.1;transl_table=11 NZ_KK316784.1 RefSeq gene 583712 584506 . - . ID=gene-AL42_RS08265;Name=AL42_RS08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08265;old_locus_tag=AL42_00512 NZ_KK316784.1 Protein Homology CDS 583712 584506 . - 0 ID=cds-WP_023637344.1;Parent=gene-AL42_RS08265;Dbxref=GenBank:WP_023637344.1;Name=WP_023637344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003879313.1;locus_tag=AL42_RS08265;product=DUF3109 family protein;protein_id=WP_023637344.1;transl_table=11 NZ_KK316784.1 RefSeq gene 584634 585668 . + . ID=gene-AL42_RS08270;Name=ppx1;gbkey=Gene;gene=ppx1;gene_biotype=protein_coding;locus_tag=AL42_RS08270;old_locus_tag=AL42_00513 NZ_KK316784.1 Protein Homology CDS 584634 585668 . + 0 ID=cds-WP_003402419.1;Parent=gene-AL42_RS08270;Dbxref=GenBank:WP_003402419.1;Name=WP_003402419.1;gbkey=CDS;gene=ppx1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003402419.1;locus_tag=AL42_RS08270;product=exopolyphosphatase Ppx1;protein_id=WP_003402419.1;transl_table=11 NZ_KK316784.1 RefSeq gene 585665 586597 . + . ID=gene-AL42_RS08275;Name=AL42_RS08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08275;old_locus_tag=AL42_00514 NZ_KK316784.1 Protein Homology CDS 585665 586597 . + 0 ID=cds-WP_003402426.1;Parent=gene-AL42_RS08275;Dbxref=GenBank:WP_003402426.1;Name=WP_003402426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215011.1;locus_tag=AL42_RS08275;product=hypothetical protein;protein_id=WP_003402426.1;transl_table=11 NZ_KK316784.1 RefSeq gene 586613 587455 . + . ID=gene-AL42_RS08280;Name=AL42_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08280;old_locus_tag=AL42_00515 NZ_KK316784.1 Protein Homology CDS 586613 587455 . + 0 ID=cds-WP_003402432.1;Parent=gene-AL42_RS08280;Dbxref=GenBank:WP_003402432.1;Name=WP_003402432.1;Ontology_term=GO:0003824,GO:0016853;gbkey=CDS;go_function=catalytic activity|0003824||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215012.1;locus_tag=AL42_RS08280;product=sugar phosphate isomerase/epimerase family protein;protein_id=WP_003402432.1;transl_table=11 NZ_KK316784.1 RefSeq gene 587471 588346 . + . ID=gene-AL42_RS08285;Name=AL42_RS08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08285;old_locus_tag=AL42_00516 NZ_KK316784.1 Protein Homology CDS 587471 588346 . + 0 ID=cds-WP_003402433.1;Parent=gene-AL42_RS08285;Dbxref=GenBank:WP_003402433.1;Name=WP_003402433.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215013.1;locus_tag=AL42_RS08285;product=thioesterase family protein;protein_id=WP_003402433.1;transl_table=11 NZ_KK316784.1 RefSeq gene 588383 589258 . + . ID=gene-AL42_RS08290;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=AL42_RS08290;old_locus_tag=AL42_00517 NZ_KK316784.1 Protein Homology CDS 588383 589258 . + 0 ID=cds-WP_003914605.1;Parent=gene-AL42_RS08290;Dbxref=GenBank:WP_003914605.1;Name=WP_003914605.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003892370.1;locus_tag=AL42_RS08290;product=pyrroline-5-carboxylate reductase;protein_id=WP_003914605.1;transl_table=11 NZ_KK316784.1 RefSeq gene 589399 589635 . + . ID=gene-AL42_RS08295;Name=AL42_RS08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08295;old_locus_tag=AL42_00518 NZ_KK316784.1 Protein Homology CDS 589399 589635 . + 0 ID=cds-WP_003402437.1;Parent=gene-AL42_RS08295;Dbxref=GenBank:WP_003402437.1;Name=WP_003402437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177624.1;locus_tag=AL42_RS08295;product=cell division/environmental response transcriptional regulator;protein_id=WP_003402437.1;transl_table=11 NZ_KK316784.1 RefSeq gene 589763 589864 . + . ID=gene-AL42_RS08300;Name=AL42_RS08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08300;old_locus_tag=AL42_00519 NZ_KK316784.1 Protein Homology CDS 589763 589864 . + 0 ID=cds-WP_003402602.1;Parent=gene-AL42_RS08300;Dbxref=GenBank:WP_003402602.1;Name=WP_003402602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003402602.1;locus_tag=AL42_RS08300;product=30S ribosomal protein bS22;protein_id=WP_003402602.1;transl_table=11 NZ_KK316784.1 RefSeq gene 589942 591072 . + . ID=gene-AL42_RS08305;Name=AL42_RS08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08305;old_locus_tag=AL42_00520 NZ_KK316784.1 Protein Homology CDS 589942 591072 . + 0 ID=cds-WP_003402607.1;Parent=gene-AL42_RS08305;Dbxref=GenBank:WP_003402607.1;Name=WP_003402607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215050.2;locus_tag=AL42_RS08305;product=SDR family oxidoreductase;protein_id=WP_003402607.1;transl_table=11 NZ_KK316784.1 RefSeq gene 591079 592155 . + . ID=gene-AL42_RS08310;Name=AL42_RS08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08310;old_locus_tag=AL42_00521 NZ_KK316784.1 Protein Homology CDS 591079 592155 . + 0 ID=cds-WP_003898486.1;Parent=gene-AL42_RS08310;Dbxref=GenBank:WP_003898486.1;Name=WP_003898486.1;Ontology_term=GO:0006644,GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid metabolic process|0006644||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215016.1;locus_tag=AL42_RS08310;product=lysophospholipid acyltransferase family protein;protein_id=WP_003898486.1;transl_table=11 NZ_KK316784.1 RefSeq gene 592159 593067 . - . ID=gene-AL42_RS08315;Name=cmaA2;gbkey=Gene;gene=cmaA2;gene_biotype=protein_coding;locus_tag=AL42_RS08315;old_locus_tag=AL42_00522 NZ_KK316784.1 Protein Homology CDS 592159 593067 . - 0 ID=cds-WP_003402621.1;Parent=gene-AL42_RS08315;Dbxref=GenBank:WP_003402621.1;Name=WP_003402621.1;gbkey=CDS;gene=cmaA2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215017.1;locus_tag=AL42_RS08315;product=cyclopropane mycolic acid synthase CmaA2;protein_id=WP_003402621.1;transl_table=11 NZ_KK316784.1 RefSeq gene 593090 593590 . - . ID=gene-AL42_RS08320;Name=AL42_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08320;old_locus_tag=AL42_00523 NZ_KK316784.1 Protein Homology CDS 593090 593590 . - 0 ID=cds-WP_003402626.1;Parent=gene-AL42_RS08320;Dbxref=GenBank:WP_003402626.1;Name=WP_003402626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215018.1;locus_tag=AL42_RS08320;product=FAS1-like dehydratase domain-containing protein;protein_id=WP_003402626.1;transl_table=11 NZ_KK316784.1 RefSeq gene 593752 594660 . - . ID=gene-AL42_RS08325;Name=AL42_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08325;old_locus_tag=AL42_00524 NZ_KK316784.1 Protein Homology CDS 593752 594660 . - 0 ID=cds-WP_369810419.1;Parent=gene-AL42_RS08325;Dbxref=GenBank:WP_369810419.1;Name=WP_369810419.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010908888.1;locus_tag=AL42_RS08325;product=HAD family hydrolase;protein_id=WP_369810419.1;transl_table=11 NZ_KK316784.1 RefSeq gene 595047 595490 . + . ID=gene-AL42_RS08330;Name=AL42_RS08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08330;old_locus_tag=AL42_00525 NZ_KK316784.1 Protein Homology CDS 595047 595490 . + 0 ID=cds-WP_003402688.1;Parent=gene-AL42_RS08330;Dbxref=GenBank:WP_003402688.1;Name=WP_003402688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215020.1;locus_tag=AL42_RS08330;product=MmpS family transport accessory protein;protein_id=WP_003402688.1;transl_table=11 NZ_KK316784.1 RefSeq gene 595487 598393 . + . ID=gene-AL42_RS08335;Name=mmpL2;gbkey=Gene;gene=mmpL2;gene_biotype=protein_coding;locus_tag=AL42_RS08335;old_locus_tag=AL42_00526 NZ_KK316784.1 Protein Homology CDS 595487 598393 . + 0 ID=cds-WP_003900161.1;Parent=gene-AL42_RS08335;Dbxref=GenBank:WP_003900161.1;Name=WP_003900161.1;gbkey=CDS;gene=mmpL2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215021.1;locus_tag=AL42_RS08335;product=RND transporter MmpL2;protein_id=WP_003900161.1;transl_table=11 NZ_KK316784.1 RefSeq gene 598386 598679 . + . ID=gene-AL42_RS08340;Name=AL42_RS08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08340;old_locus_tag=AL42_00527 NZ_KK316784.1 Protein Homology CDS 598386 598679 . + 0 ID=cds-WP_003402695.1;Parent=gene-AL42_RS08340;Dbxref=GenBank:WP_003402695.1;Name=WP_003402695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215022.1;locus_tag=AL42_RS08340;product=glutaredoxin family protein;protein_id=WP_003402695.1;transl_table=11 NZ_KK316784.1 RefSeq gene 598729 600135 . + . ID=gene-AL42_RS08345;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=AL42_RS08345;old_locus_tag=AL42_00528 NZ_KK316784.1 Protein Homology CDS 598729 600135 . + 0 ID=cds-WP_003402699.1;Parent=gene-AL42_RS08345;Dbxref=GenBank:WP_003402699.1;Name=WP_003402699.1;Ontology_term=GO:0008883;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215023.1;locus_tag=AL42_RS08345;product=glutamyl-tRNA reductase;protein_id=WP_003402699.1;transl_table=11 NZ_KK316784.1 RefSeq gene 600145 601074 . + . ID=gene-AL42_RS08350;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=AL42_RS08350;old_locus_tag=AL42_00529 NZ_KK316784.1 Protein Homology CDS 600145 601074 . + 0 ID=cds-WP_003402702.1;Parent=gene-AL42_RS08350;Dbxref=GenBank:WP_003402702.1;Name=WP_003402702.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215024.1;locus_tag=AL42_RS08350;product=hydroxymethylbilane synthase;protein_id=WP_003402702.1;transl_table=11 NZ_KK316784.1 RefSeq gene 601107 602804 . + . ID=gene-AL42_RS08355;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=AL42_RS08355;old_locus_tag=AL42_00530 NZ_KK316784.1 Protein Homology CDS 601107 602804 . + 0 ID=cds-WP_003900163.1;Parent=gene-AL42_RS08355;Dbxref=GenBank:WP_003900163.1;Name=WP_003900163.1;Ontology_term=GO:0033014,GO:0004852;gbkey=CDS;gene=hemD;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177733.1;locus_tag=AL42_RS08355;product=bifunctional uroporphyrinogen-III C-methyltransferase/uroporphyrinogen-III synthase;protein_id=WP_003900163.1;transl_table=11 NZ_KK316784.1 RefSeq gene 602890 603879 . + . ID=gene-AL42_RS08360;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=AL42_RS08360;old_locus_tag=AL42_00531 NZ_KK316784.1 Protein Homology CDS 602890 603879 . + 0 ID=cds-WP_003898491.1;Parent=gene-AL42_RS08360;Dbxref=GenBank:WP_003898491.1;Name=WP_003898491.1;Ontology_term=GO:0033014,GO:0003824,GO:0004655,GO:0046872;gbkey=CDS;gene=hemB;go_function=catalytic activity|0003824||IEA,porphobilinogen synthase activity|0004655||IEA,metal ion binding|0046872||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215026.1;locus_tag=AL42_RS08360;product=porphobilinogen synthase;protein_id=WP_003898491.1;transl_table=11 NZ_KK316784.1 RefSeq gene 603892 604440 . + . ID=gene-AL42_RS08365;Name=AL42_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08365;old_locus_tag=AL42_00532 NZ_KK316784.1 Protein Homology CDS 603892 604440 . + 0 ID=cds-WP_003402713.1;Parent=gene-AL42_RS08365;Dbxref=GenBank:WP_003402713.1;Name=WP_003402713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215027.1;locus_tag=AL42_RS08365;product=hypothetical protein;protein_id=WP_003402713.1;transl_table=11 NZ_KK316784.1 RefSeq gene 604437 604736 . + . ID=gene-AL42_RS08370;Name=AL42_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08370;old_locus_tag=AL42_00533 NZ_KK316784.1 Protein Homology CDS 604437 604736 . + 0 ID=cds-WP_003402715.1;Parent=gene-AL42_RS08370;Dbxref=GenBank:WP_003402715.1;Name=WP_003402715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215028.1;locus_tag=AL42_RS08370;product=hypothetical protein;protein_id=WP_003402715.1;transl_table=11 NZ_KK316784.1 RefSeq gene 604815 606350 . + . ID=gene-AL42_RS08375;Name=AL42_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08375;old_locus_tag=AL42_00534 NZ_KK316784.1 Protein Homology CDS 604815 606350 . + 0 ID=cds-WP_003900164.1;Parent=gene-AL42_RS08375;Dbxref=GenBank:WP_003900164.1;Name=WP_003900164.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015287795.1;locus_tag=AL42_RS08375;product=HNH endonuclease signature motif containing protein;protein_id=WP_003900164.1;transl_table=11 NZ_KK316784.1 RefSeq gene 606347 606823 . - . ID=gene-AL42_RS08380;Name=oprA;gbkey=Gene;gene=oprA;gene_biotype=protein_coding;locus_tag=AL42_RS08380;old_locus_tag=AL42_00535 NZ_KK316784.1 Protein Homology CDS 606347 606823 . - 0 ID=cds-WP_003402807.1;Parent=gene-AL42_RS08380;Dbxref=GenBank:WP_003402807.1;Name=WP_003402807.1;gbkey=CDS;gene=oprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215030.1;locus_tag=AL42_RS08380;product=osmosensory protein OprA;protein_id=WP_003402807.1;transl_table=11 NZ_KK316784.1 RefSeq gene 607112 608344 . + . ID=gene-AL42_RS08385;Name=AL42_RS08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08385;old_locus_tag=AL42_00536 NZ_KK316784.1 Protein Homology CDS 607112 608344 . + 0 ID=cds-WP_003916685.1;Parent=gene-AL42_RS08385;Dbxref=GenBank:WP_003916685.1;Name=WP_003916685.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003873687.1;locus_tag=AL42_RS08385;product=acyltransferase family protein;protein_id=WP_003916685.1;transl_table=11 NZ_KK316784.1 RefSeq gene 608476 609171 . + . ID=gene-AL42_RS08390;Name=AL42_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08390;old_locus_tag=AL42_00537 NZ_KK316784.1 Protein Homology CDS 608476 609171 . + 0 ID=cds-WP_003402818.1;Parent=gene-AL42_RS08390;Dbxref=GenBank:WP_003402818.1;Name=WP_003402818.1;Ontology_term=GO:0016042,GO:0052689;gbkey=CDS;go_function=carboxylic ester hydrolase activity|0052689||IEA;go_process=lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215032.1;locus_tag=AL42_RS08390;product=Rv0518 family GDSL lipase;protein_id=WP_003402818.1;transl_table=11 NZ_KK316784.1 RefSeq gene 609460 610317 . - . ID=gene-AL42_RS08395;Name=AL42_RS08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08395;old_locus_tag=AL42_00538 NZ_KK316784.1 Protein Homology CDS 609460 610317 . - 0 ID=cds-WP_003912593.1;Parent=gene-AL42_RS08395;Dbxref=GenBank:WP_003912593.1;Name=WP_003912593.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912593.1;locus_tag=AL42_RS08395;product=alpha/beta hydrolase;protein_id=WP_003912593.1;transl_table=11 NZ_KK316784.1 RefSeq gene 610582 610893 . + . ID=gene-AL42_RS08400;Name=AL42_RS08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08400;old_locus_tag=AL42_00539 NZ_KK316784.1 Protein Homology CDS 610582 610893 . + 0 ID=cds-WP_014585060.1;Parent=gene-AL42_RS08400;Dbxref=GenBank:WP_014585060.1;Name=WP_014585060.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: protein motif:HMM:NF019846.6;locus_tag=AL42_RS08400;product=class I SAM-dependent methyltransferase;protein_id=WP_014585060.1;transl_table=11 NZ_KK316784.1 RefSeq gene 610886 611191 . + . ID=gene-AL42_RS08405;Name=AL42_RS08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08405;old_locus_tag=AL42_00540 NZ_KK316784.1 Protein Homology CDS 610886 611191 . + 0 ID=cds-WP_003898493.1;Parent=gene-AL42_RS08405;Dbxref=GenBank:WP_003898493.1;Name=WP_003898493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003402835.1;locus_tag=AL42_RS08405;product=hypothetical protein;protein_id=WP_003898493.1;transl_table=11 NZ_KK316784.1 RefSeq gene 611245 612630 . + . ID=gene-AL42_RS08410;Name=gabP;gbkey=Gene;gene=gabP;gene_biotype=protein_coding;locus_tag=AL42_RS08410;old_locus_tag=AL42_00541 NZ_KK316784.1 Protein Homology CDS 611245 612630 . + 0 ID=cds-WP_078449386.1;Parent=gene-AL42_RS08410;Dbxref=GenBank:WP_078449386.1;Name=WP_078449386.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;gene=gabP;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911231.1;locus_tag=AL42_RS08410;product=amino acid permease;protein_id=WP_078449386.1;transl_table=11 NZ_KK316784.1 RefSeq gene 612614 613009 . - . ID=gene-AL42_RS08415;Name=AL42_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08415;old_locus_tag=AL42_00542 NZ_KK316784.1 Protein Homology CDS 612614 613009 . - 0 ID=cds-WP_003402842.1;Parent=gene-AL42_RS08415;Dbxref=GenBank:WP_003402842.1;Name=WP_003402842.1;Ontology_term=GO:0003824,GO:0070967;gbkey=CDS;go_function=catalytic activity|0003824||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215037.1;locus_tag=AL42_RS08415;product=nitroreductase family deazaflavin-dependent oxidoreductase;protein_id=WP_003402842.1;transl_table=11 NZ_KK316784.1 RefSeq gene 613123 614511 . + . ID=gene-AL42_RS08420;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=AL42_RS08420;old_locus_tag=AL42_00543 NZ_KK316784.1 Protein Homology CDS 613123 614511 . + 0 ID=cds-WP_003402844.1;Parent=gene-AL42_RS08420;Dbxref=GenBank:WP_003402844.1;Name=WP_003402844.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215038.1;locus_tag=AL42_RS08420;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_003402844.1;transl_table=11 NZ_KK316784.1 RefSeq gene 614511 615119 . + . ID=gene-AL42_RS08425;Name=AL42_RS08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08425;old_locus_tag=AL42_00544 NZ_KK316784.1 Protein Homology CDS 614511 615119 . + 0 ID=cds-WP_003402845.1;Parent=gene-AL42_RS08425;Dbxref=GenBank:WP_003402845.1;Name=WP_003402845.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215039.1;locus_tag=AL42_RS08425;product=histidine phosphatase family protein;protein_id=WP_003402845.1;transl_table=11 NZ_KK316784.1 RefSeq gene 615173 615784 . + . ID=gene-AL42_RS08430;Name=AL42_RS08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08430;old_locus_tag=AL42_00545 NZ_KK316784.1 Protein Homology CDS 615173 615784 . + 0 ID=cds-WP_003911234.1;Parent=gene-AL42_RS08430;Dbxref=GenBank:WP_003911234.1;Name=WP_003911234.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911234.1;locus_tag=AL42_RS08430;product=TlpA disulfide reductase family protein;protein_id=WP_003911234.1;transl_table=11 NZ_KK316784.1 RefSeq gene 615781 616560 . + . ID=gene-AL42_RS08435;Name=ccdA;gbkey=Gene;gene=ccdA;gene_biotype=protein_coding;locus_tag=AL42_RS08435;old_locus_tag=AL42_00546 NZ_KK316784.1 Protein Homology CDS 615781 616560 . + 0 ID=cds-WP_003402847.1;Parent=gene-AL42_RS08435;Dbxref=GenBank:WP_003402847.1;Name=WP_003402847.1;Ontology_term=GO:0017004,GO:0016020;gbkey=CDS;gene=ccdA;go_component=membrane|0016020||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177735.1;locus_tag=AL42_RS08435;product=cytochrome c biogenesis CcdA family protein;protein_id=WP_003402847.1;transl_table=11 NZ_KK316784.1 RefSeq gene 616593 618182 . + . ID=gene-AL42_RS08440;Name=resB;gbkey=Gene;gene=resB;gene_biotype=protein_coding;locus_tag=AL42_RS08440;old_locus_tag=AL42_00547 NZ_KK316784.1 Protein Homology CDS 616593 618182 . + 0 ID=cds-WP_003402848.1;Parent=gene-AL42_RS08440;Dbxref=GenBank:WP_003402848.1;Name=WP_003402848.1;Ontology_term=GO:0017004,GO:0016020;gbkey=CDS;gene=resB;go_component=membrane|0016020||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215042.1;locus_tag=AL42_RS08440;product=cytochrome c biogenesis protein ResB;protein_id=WP_003402848.1;transl_table=11 NZ_KK316784.1 RefSeq gene 618179 619153 . + . ID=gene-AL42_RS08445;Name=ccsB;gbkey=Gene;gene=ccsB;gene_biotype=protein_coding;locus_tag=AL42_RS08445;old_locus_tag=AL42_00548 NZ_KK316784.1 Protein Homology CDS 618179 619153 . + 0 ID=cds-WP_003905331.1;Parent=gene-AL42_RS08445;Dbxref=GenBank:WP_003905331.1;Name=WP_003905331.1;Ontology_term=GO:0017004,GO:0020037;gbkey=CDS;gene=ccsB;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215041.2;locus_tag=AL42_RS08445;product=c-type cytochrome biogenesis protein CcsB;protein_id=WP_003905331.1;transl_table=11 NZ_KK316784.1 RefSeq gene 619195 620412 . + . ID=gene-AL42_RS08450;Name=AL42_RS08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08450;old_locus_tag=AL42_00549 NZ_KK316784.1 Protein Homology CDS 619195 620412 . + 0 ID=cds-WP_003910801.1;Parent=gene-AL42_RS08450;Dbxref=GenBank:WP_003910801.1;Name=WP_003910801.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215044.1;locus_tag=AL42_RS08450;product=MinD/ParA family ATP-binding protein;protein_id=WP_003910801.1;transl_table=11 NZ_KK316784.1 RefSeq gene 620409 620570 . - . ID=gene-AL42_RS08455;Name=AL42_RS08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08455;old_locus_tag=AL42_00550 NZ_KK316784.1 Protein Homology CDS 620409 620570 . - 0 ID=cds-WP_003402851.1;Parent=gene-AL42_RS08455;Dbxref=GenBank:WP_003402851.1;Name=WP_003402851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007409181.1;locus_tag=AL42_RS08455;product=hypothetical protein;protein_id=WP_003402851.1;transl_table=11 NZ_KK316784.1 RefSeq gene 620617 620934 . + . ID=gene-AL42_RS08460;Name=AL42_RS08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08460;old_locus_tag=AL42_00551 NZ_KK316784.1 Protein Homology CDS 620617 620934 . + 0 ID=cds-WP_003402853.1;Parent=gene-AL42_RS08460;Dbxref=GenBank:WP_003402853.1;Name=WP_003402853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215045.1;locus_tag=AL42_RS08460;product=DUF4229 domain-containing protein;protein_id=WP_003402853.1;transl_table=11 NZ_KK316784.1 RefSeq gene 621081 622844 . + . ID=gene-AL42_RS08465;Name=AL42_RS08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08465;old_locus_tag=AL42_00552 NZ_KK316784.1 Protein Homology CDS 621081 622844 . + 0 ID=cds-WP_044501765.1;Parent=gene-AL42_RS08465;Dbxref=GenBank:WP_044501765.1;Name=WP_044501765.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177736.1;locus_tag=AL42_RS08465;product=PE family protein;protein_id=WP_044501765.1;transl_table=11 NZ_KK316784.1 RefSeq gene 622740 623747 . - . ID=gene-AL42_RS08470;Name=fabH;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;locus_tag=AL42_RS08470;old_locus_tag=AL42_00553 NZ_KK316784.1 Protein Homology CDS 622740 623747 . - 0 ID=cds-WP_003402861.1;Parent=gene-AL42_RS08470;Dbxref=GenBank:WP_003402861.1;Name=WP_003402861.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabH;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215047.1;locus_tag=AL42_RS08470;product=beta-ketoacyl-ACP synthase III;protein_id=WP_003402861.1;transl_table=11 NZ_KK316784.1 RefSeq gene 623829 624707 . - . ID=gene-AL42_RS08475;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=AL42_RS08475;old_locus_tag=AL42_00554 NZ_KK316784.1 Protein Homology CDS 623829 624707 . - 0 ID=cds-WP_003402865.1;Parent=gene-AL42_RS08475;Dbxref=GenBank:WP_003402865.1;Name=WP_003402865.1;Ontology_term=GO:0009234,GO:0046428,GO:0016020;gbkey=CDS;gene=menA;go_component=membrane|0016020||IEA;go_function=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase activity|0046428||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215048.1;locus_tag=AL42_RS08475;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_003402865.1;transl_table=11 NZ_KK316784.1 RefSeq gene 624742 625518 . + . ID=gene-AL42_RS08480;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=AL42_RS08480;old_locus_tag=AL42_00555 NZ_KK316784.1 Protein Homology CDS 624742 625518 . + 0 ID=cds-WP_003911222.1;Parent=gene-AL42_RS08480;Dbxref=GenBank:WP_003911222.1;Name=WP_003911222.1;Ontology_term=GO:0009116,GO:0017061;gbkey=CDS;gene=pnp;go_function=S-methyl-5-thioadenosine phosphorylase activity|0017061||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009934924.1;locus_tag=AL42_RS08480;product=S-methyl-5'-thioadenosine phosphorylase;protein_id=WP_003911222.1;transl_table=11 NZ_KK316784.1 RefSeq gene 625515 626555 . + . ID=gene-AL42_RS08485;Name=AL42_RS08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08485;old_locus_tag=AL42_00556 NZ_KK316784.1 Protein Homology CDS 625515 626555 . + 0 ID=cds-WP_003901872.1;Parent=gene-AL42_RS08485;Dbxref=GenBank:WP_003901872.1;Name=WP_003901872.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177737.1;locus_tag=AL42_RS08485;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_003901872.1;transl_table=11 NZ_KK316784.1 RefSeq gene 626565 627998 . - . ID=gene-AL42_RS08490;Name=AL42_RS08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08490;old_locus_tag=AL42_00557 NZ_KK316784.1 Protein Homology CDS 626565 627998 . - 0 ID=cds-WP_003900954.1;Parent=gene-AL42_RS08490;Dbxref=GenBank:WP_003900954.1;Name=WP_003900954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215051.1;locus_tag=AL42_RS08490;product=DUF7937 domain-containing protein;protein_id=WP_003900954.1;transl_table=11 NZ_KK316784.1 RefSeq gene 628307 629953 . + . ID=gene-AL42_RS08495;Name=AL42_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08495;old_locus_tag=AL42_00558 NZ_KK316784.1 Protein Homology CDS 628307 629953 . + 0 ID=cds-WP_003900169.1;Parent=gene-AL42_RS08495;Dbxref=GenBank:WP_003900169.1;Name=WP_003900169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215052.1;locus_tag=AL42_RS08495;product=DUF7159 family protein;protein_id=WP_003900169.1;transl_table=11 NZ_KK316784.1 RefSeq gene 629986 630642 . + . ID=gene-AL42_RS08500;Name=AL42_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08500;old_locus_tag=AL42_00559 NZ_KK316784.1 Protein Homology CDS 629986 630642 . + 0 ID=cds-WP_003898499.1;Parent=gene-AL42_RS08500;Dbxref=GenBank:WP_003898499.1;Name=WP_003898499.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898499.1;locus_tag=AL42_RS08500;product=glycosyltransferase family 2 protein;protein_id=WP_003898499.1;transl_table=11 NZ_KK316784.1 RefSeq gene 630639 631301 . + . ID=gene-AL42_RS08505;Name=AL42_RS08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08505;old_locus_tag=AL42_00560 NZ_KK316784.1 Protein Homology CDS 630639 631301 . + 0 ID=cds-WP_003402886.1;Parent=gene-AL42_RS08505;Dbxref=GenBank:WP_003402886.1;Name=WP_003402886.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215054.1;locus_tag=AL42_RS08505;product=TIGR04282 family arsenosugar biosynthesis glycosyltransferase;protein_id=WP_003402886.1;transl_table=11 NZ_KK316784.1 RefSeq gene 631322 632671 . - . ID=gene-AL42_RS08510;Name=AL42_RS08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08510;old_locus_tag=AL42_00561 NZ_KK316784.1 Protein Homology CDS 631322 632671 . - 0 ID=cds-WP_003402890.1;Parent=gene-AL42_RS08510;Dbxref=GenBank:WP_003402890.1;Name=WP_003402890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215055.1;locus_tag=AL42_RS08510;product=integral membrane protein;protein_id=WP_003402890.1;transl_table=11 NZ_KK316784.1 RefSeq gene 632683 633771 . - . ID=gene-AL42_RS08515;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=AL42_RS08515;old_locus_tag=AL42_00562 NZ_KK316784.1 Protein Homology CDS 632683 633771 . - 0 ID=cds-WP_003402892.1;Parent=gene-AL42_RS08515;Dbxref=GenBank:WP_003402892.1;Name=WP_003402892.1;gbkey=CDS;gene=menE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215056.1;locus_tag=AL42_RS08515;product=o-succinylbenzoate--CoA ligase;protein_id=WP_003402892.1;transl_table=11 NZ_KK316784.1 RefSeq gene 633840 634142 . - . ID=gene-AL42_RS08520;Name=AL42_RS08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08520;old_locus_tag=AL42_00563 NZ_KK316784.1 Protein Homology CDS 633840 634142 . - 0 ID=cds-WP_003402896.1;Parent=gene-AL42_RS08520;Dbxref=GenBank:WP_003402896.1;Name=WP_003402896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215057.1;locus_tag=AL42_RS08520;product=DUF3349 domain-containing protein;protein_id=WP_003402896.1;transl_table=11 NZ_KK316784.1 RefSeq gene 634202 634480 . - . ID=gene-AL42_RS08525;Name=AL42_RS08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08525;old_locus_tag=AL42_00564 NZ_KK316784.1 Protein Homology CDS 634202 634480 . - 0 ID=cds-WP_003402901.1;Parent=gene-AL42_RS08525;Dbxref=GenBank:WP_003402901.1;Name=WP_003402901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215058.1;locus_tag=AL42_RS08525;product=hypothetical protein;protein_id=WP_003402901.1;transl_table=11 NZ_KK316784.1 RefSeq gene 634477 635730 . - . ID=gene-AL42_RS08530;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=AL42_RS08530;old_locus_tag=AL42_00565 NZ_KK316784.1 Protein Homology CDS 634477 635730 . - 0 ID=cds-WP_003402904.1;Parent=gene-AL42_RS08530;Dbxref=GenBank:WP_003402904.1;Name=WP_003402904.1;Ontology_term=GO:0035435,GO:0005315,GO:0005886;gbkey=CDS;gene=pitA;go_component=plasma membrane|0005886||IEA;go_function=phosphate transmembrane transporter activity|0005315||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215059.1;locus_tag=AL42_RS08530;product=inorganic phosphate transporter;protein_id=WP_003402904.1;transl_table=11 NZ_KK316784.1 RefSeq gene 635850 636236 . - . ID=gene-AL42_RS08535;Name=AL42_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08535;old_locus_tag=AL42_00566 NZ_KK316784.1 Protein Homology CDS 635850 636236 . - 0 ID=cds-WP_003402907.1;Parent=gene-AL42_RS08535;Dbxref=GenBank:WP_003402907.1;Name=WP_003402907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215060.1;locus_tag=AL42_RS08535;product=VOC family protein;protein_id=WP_003402907.1;transl_table=11 NZ_KK316784.1 RefSeq gene 636299 637183 . - . ID=gene-AL42_RS08540;Name=AL42_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08540;old_locus_tag=AL42_00567 NZ_KK316784.1 Protein Homology CDS 636299 637183 . - 0 ID=cds-WP_003402909.1;Parent=gene-AL42_RS08540;Dbxref=GenBank:WP_003402909.1;Name=WP_003402909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215061.1;locus_tag=AL42_RS08540;product=SDR family oxidoreductase;protein_id=WP_003402909.1;transl_table=11 NZ_KK316784.1 RefSeq gene 637279 638181 . - . ID=gene-AL42_RS08545;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=AL42_RS08545;old_locus_tag=AL42_00568 NZ_KK316784.1 Protein Homology CDS 637279 638181 . - 0 ID=cds-WP_003915439.1;Parent=gene-AL42_RS08545;Dbxref=GenBank:WP_003915439.1;Name=WP_003915439.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020727493.1;locus_tag=AL42_RS08545;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_003915439.1;transl_table=11 NZ_KK316784.1 RefSeq gene 638495 638908 . - . ID=gene-AL42_RS08550;Name=AL42_RS08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08550;old_locus_tag=AL42_00569 NZ_KK316784.1 Protein Homology CDS 638495 638908 . - 0 ID=cds-WP_003898500.1;Parent=gene-AL42_RS08550;Dbxref=GenBank:WP_003898500.1;Name=WP_003898500.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215063.1;locus_tag=AL42_RS08550;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003898500.1;transl_table=11 NZ_KK316784.1 RefSeq gene 638905 639171 . - . ID=gene-AL42_RS08555;Name=AL42_RS08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08555;old_locus_tag=AL42_00570 NZ_KK316784.1 Protein Homology CDS 638905 639171 . - 0 ID=cds-WP_003402915.1;Parent=gene-AL42_RS08555;Dbxref=GenBank:WP_003402915.1;Name=WP_003402915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215064.1;locus_tag=AL42_RS08555;product=type II toxin-antitoxin system CcdA family antitoxin;protein_id=WP_003402915.1;transl_table=11 NZ_KK316784.1 RefSeq gene 639363 641078 . - . ID=gene-AL42_RS08560;Name=fadD8;gbkey=Gene;gene=fadD8;gene_biotype=protein_coding;locus_tag=AL42_RS08560;old_locus_tag=AL42_00571 NZ_KK316784.1 Protein Homology CDS 639363 641078 . - 0 ID=cds-WP_003402917.1;Parent=gene-AL42_RS08560;Dbxref=GenBank:WP_003402917.1;Name=WP_003402917.1;gbkey=CDS;gene=fadD8;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215065.1;locus_tag=AL42_RS08560;product=fatty-acid--CoA ligase FadD8;protein_id=WP_003402917.1;transl_table=11 NZ_KK316784.1 RefSeq gene 641156 642760 . + . ID=gene-AL42_RS08565;Name=AL42_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08565;old_locus_tag=AL42_00572 NZ_KK316784.1 Protein Homology CDS 641156 642760 . + 0 ID=cds-WP_003402920.1;Parent=gene-AL42_RS08565;Dbxref=GenBank:WP_003402920.1;Name=WP_003402920.1;Ontology_term=GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215066.1;locus_tag=AL42_RS08565;product=amidohydrolase;protein_id=WP_003402920.1;transl_table=11 NZ_KK316784.1 RefSeq gene 642757 643737 . + . ID=gene-AL42_RS08570;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=AL42_RS08570;old_locus_tag=AL42_00573 NZ_KK316784.1 Protein Homology CDS 642757 643737 . + 0 ID=cds-WP_003402923.1;Parent=gene-AL42_RS08570;Dbxref=GenBank:WP_003402923.1;Name=WP_003402923.1;gbkey=CDS;gene=menC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215067.1;locus_tag=AL42_RS08570;product=o-succinylbenzoate synthase;protein_id=WP_003402923.1;transl_table=11 NZ_KK316784.1 RefSeq gene 643734 644522 . + . ID=gene-AL42_RS08575;Name=bpoC;gbkey=Gene;gene=bpoC;gene_biotype=protein_coding;locus_tag=AL42_RS08575;old_locus_tag=AL42_00574 NZ_KK316784.1 Protein Homology CDS 643734 644522 . + 0 ID=cds-WP_003402925.1;Parent=gene-AL42_RS08575;Dbxref=GenBank:WP_003402925.1;Name=WP_003402925.1;gbkey=CDS;gene=bpoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215068.1;locus_tag=AL42_RS08575;product=alpha/beta fold hydrolase;protein_id=WP_003402925.1;transl_table=11 NZ_KK316784.1 RefSeq gene 644565 646229 . + . ID=gene-AL42_RS08580;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=AL42_RS08580;old_locus_tag=AL42_00575 NZ_KK316784.1 Protein Homology CDS 644565 646229 . + 0 ID=cds-WP_003402927.1;Parent=gene-AL42_RS08580;Dbxref=GenBank:WP_003402927.1;Name=WP_003402927.1;Ontology_term=GO:0009234,GO:0030976,GO:0070204;gbkey=CDS;gene=menD;go_function=thiamine pyrophosphate binding|0030976||IEA,2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215069.1;locus_tag=AL42_RS08580;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_003402927.1;transl_table=11 NZ_KK316784.1 RefSeq gene 646226 646741 . + . ID=gene-AL42_RS08585;Name=AL42_RS08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08585;old_locus_tag=AL42_00576 NZ_KK316784.1 Protein Homology CDS 646226 646741 . + 0 ID=cds-WP_003402929.1;Parent=gene-AL42_RS08585;Dbxref=GenBank:WP_003402929.1;Name=WP_003402929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215070.1;locus_tag=AL42_RS08585;product=DUF3592 domain-containing protein;protein_id=WP_003402929.1;transl_table=11 NZ_KK316784.1 RefSeq gene 646812 647939 . + . ID=gene-AL42_RS08590;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=AL42_RS08590;old_locus_tag=AL42_00577 NZ_KK316784.1 Protein Homology CDS 646812 647939 . + 0 ID=cds-WP_003898502.1;Parent=gene-AL42_RS08590;Dbxref=GenBank:WP_003898502.1;Name=WP_003898502.1;gbkey=CDS;gene=mgtA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912598.1;locus_tag=AL42_RS08590;product=GDP-mannose-dependent alpha-mannosyltransferase;protein_id=WP_003898502.1;transl_table=11 NZ_KK316784.1 RefSeq gene 647956 648660 . + . ID=gene-AL42_RS08595;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=AL42_RS08595;old_locus_tag=AL42_00578 NZ_KK316784.1 Protein Homology CDS 647956 648660 . + 0 ID=cds-WP_003402936.1;Parent=gene-AL42_RS08595;Dbxref=GenBank:WP_003402936.1;Name=WP_003402936.1;Ontology_term=GO:0008168;gbkey=CDS;gene=menH;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177738.1;locus_tag=AL42_RS08595;product=demethylmenaquinone methyltransferase;protein_id=WP_003402936.1;transl_table=11 NZ_KK316784.1 RefSeq gene 648674 649012 . - . ID=gene-AL42_RS08600;Name=AL42_RS08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08600;old_locus_tag=AL42_00579 NZ_KK316784.1 Protein Homology CDS 648674 649012 . - 0 ID=cds-WP_003402937.1;Parent=gene-AL42_RS08600;Dbxref=GenBank:WP_003402937.1;Name=WP_003402937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215073.1;locus_tag=AL42_RS08600;product=DUF732 domain-containing protein;protein_id=WP_003402937.1;transl_table=11 NZ_KK316784.1 RefSeq gene 649046 649723 . - . ID=gene-AL42_RS08605;Name=AL42_RS08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08605;old_locus_tag=AL42_00580 NZ_KK316784.1 Protein Homology CDS 649046 649723 . - 0 ID=cds-WP_003911240.1;Parent=gene-AL42_RS08605;Dbxref=GenBank:WP_003911240.1;Name=WP_003911240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911240.1;locus_tag=AL42_RS08605;product=benzoquinone methyltransferase;protein_id=WP_003911240.1;transl_table=11 NZ_KK316784.1 RefSeq gene 649796 651022 . - . ID=gene-AL42_RS08610;Name=menJ;gbkey=Gene;gene=menJ;gene_biotype=protein_coding;locus_tag=AL42_RS08610;old_locus_tag=AL42_00581 NZ_KK316784.1 Protein Homology CDS 649796 651022 . - 0 ID=cds-WP_003402939.1;Parent=gene-AL42_RS08610;Dbxref=GenBank:WP_003402939.1;Name=WP_003402939.1;Ontology_term=GO:0009234,GO:0016627,GO:0016628;gbkey=CDS;gene=menJ;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215075.1;locus_tag=AL42_RS08610;product=menaquinone reductase;protein_id=WP_003402939.1;transl_table=11 NZ_KK316784.1 RefSeq gene 651038 652045 . + . ID=gene-AL42_RS08615;Name=grcC;gbkey=Gene;gene=grcC;gene_biotype=protein_coding;locus_tag=AL42_RS08615;old_locus_tag=AL42_00582 NZ_KK316784.1 Protein Homology CDS 651038 652045 . + 0 ID=cds-WP_003402957.1;Parent=gene-AL42_RS08615;Dbxref=GenBank:WP_003402957.1;Name=WP_003402957.1;gbkey=CDS;gene=grcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215076.1;locus_tag=AL42_RS08615;product=polyprenyl-diphosphate synthase GrcC;protein_id=WP_003402957.1;transl_table=11 NZ_KK316784.1 RefSeq gene 652146 653006 . + . ID=gene-AL42_RS08620;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=AL42_RS08620;old_locus_tag=AL42_00583 NZ_KK316784.1 Protein Homology CDS 652146 653006 . + 0 ID=cds-WP_003402959.1;Parent=gene-AL42_RS08620;Dbxref=GenBank:WP_003402959.1;Name=WP_003402959.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215077.1;locus_tag=AL42_RS08620;product=zinc metalloprotease HtpX;protein_id=WP_003402959.1;transl_table=11 NZ_KK316784.1 RefSeq gene 653191 654216 . - . ID=gene-AL42_RS08625;Name=AL42_RS08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08625;old_locus_tag=AL42_00584 NZ_KK316784.1 Protein Homology CDS 653191 654216 . - 0 ID=cds-WP_003900965.1;Parent=gene-AL42_RS08625;Dbxref=GenBank:WP_003900965.1;Name=WP_003900965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215078.1;locus_tag=AL42_RS08625;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_003900965.1;transl_table=11 NZ_KK316784.1 RefSeq gene 654277 655737 . - . ID=gene-AL42_RS08630;Name=AL42_RS08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08630;old_locus_tag=AL42_00585 NZ_KK316784.1 Protein Homology CDS 654277 655737 . - 0 ID=cds-WP_003900966.1;Parent=gene-AL42_RS08630;Dbxref=GenBank:WP_003900966.1;Name=WP_003900966.1;Ontology_term=GO:0004497,GO:0016709,GO:0050660;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215079.1;locus_tag=AL42_RS08630;product=flavin-containing monooxygenase;protein_id=WP_003900966.1;transl_table=11 NZ_KK316784.1 RefSeq gene 655815 656306 . - . ID=gene-AL42_RS08635;Name=AL42_RS08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08635;old_locus_tag=AL42_00586 NZ_KK316784.1 Protein Homology CDS 655815 656306 . - 0 ID=cds-WP_003402987.1;Parent=gene-AL42_RS08635;Dbxref=GenBank:WP_003402987.1;Name=WP_003402987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215080.1;locus_tag=AL42_RS08635;product=YajQ family cyclic di-GMP-binding protein;protein_id=WP_003402987.1;transl_table=11 NZ_KK316784.1 RefSeq gene 656376 656459 . + . ID=gene-AL42_RS08640;Name=AL42_RS08640;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL42_RS08640;old_locus_tag=AL42_00587 NZ_KK316784.1 tRNAscan-SE tRNA 656376 656459 . + . ID=rna-AL42_RS08640;Parent=gene-AL42_RS08640;anticodon=(pos:656410..656412);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS08640;product=tRNA-Tyr NZ_KK316784.1 tRNAscan-SE exon 656376 656459 . + . ID=exon-AL42_RS08640-1;Parent=rna-AL42_RS08640;anticodon=(pos:656410..656412);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS08640;product=tRNA-Tyr NZ_KK316784.1 RefSeq gene 656588 657607 . + . ID=gene-AL42_RS08645;Name=AL42_RS08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08645;old_locus_tag=AL42_00588 NZ_KK316784.1 Protein Homology CDS 656588 657607 . + 0 ID=cds-WP_003900173.1;Parent=gene-AL42_RS08645;Dbxref=GenBank:WP_003900173.1;Name=WP_003900173.1;Ontology_term=GO:0008171;gbkey=CDS;go_function=O-methyltransferase activity|0008171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215081.1;locus_tag=AL42_RS08645;product=methyltransferase;protein_id=WP_003900173.1;transl_table=11 NZ_KK316784.1 RefSeq gene 657717 659135 . + . ID=gene-AL42_RS08650;Name=AL42_RS08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08650;old_locus_tag=AL42_00589 NZ_KK316784.1 Protein Homology CDS 657717 659135 . + 0 ID=cds-WP_003402992.1;Parent=gene-AL42_RS08650;Dbxref=GenBank:WP_003402992.1;Name=WP_003402992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215082.1;locus_tag=AL42_RS08650;product=cytochrome P450;protein_id=WP_003402992.1;transl_table=11 NZ_KK316784.1 RefSeq gene 659270 659536 . + . ID=gene-AL42_RS08655;Name=AL42_RS08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08655;old_locus_tag=AL42_00590 NZ_KK316784.1 Protein Homology CDS 659270 659536 . + 0 ID=cds-WP_003402995.1;Parent=gene-AL42_RS08655;Dbxref=GenBank:WP_003402995.1;Name=WP_003402995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215083.1;locus_tag=AL42_RS08655;product=DUF1918 domain-containing protein;protein_id=WP_003402995.1;transl_table=11 NZ_KK316784.1 RefSeq gene 659562 661640 . + . ID=gene-AL42_RS08660;Name=nrdZ;gbkey=Gene;gene=nrdZ;gene_biotype=protein_coding;locus_tag=AL42_RS08660;old_locus_tag=AL42_00591 NZ_KK316784.1 Protein Homology CDS 659562 661640 . + 0 ID=cds-WP_003402998.1;Parent=gene-AL42_RS08660;Dbxref=GenBank:WP_003402998.1;Name=WP_003402998.1;Ontology_term=GO:0000166,GO:0004748,GO:0031419;gbkey=CDS;gene=nrdZ;go_function=nucleotide binding|0000166||IEA,ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,cobalamin binding|0031419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215084.1;locus_tag=AL42_RS08660;product=adenosylcobalamin-dependent ribonucleoside-diphosphate reductase;protein_id=WP_003402998.1;transl_table=11 NZ_KK316784.1 RefSeq gene 661754 663085 . - . ID=gene-AL42_RS08665;Name=AL42_RS08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08665;old_locus_tag=AL42_00592 NZ_KK316784.1 Protein Homology CDS 661754 663085 . - 0 ID=cds-WP_003403001.1;Parent=gene-AL42_RS08665;Dbxref=GenBank:WP_003403001.1;Name=WP_003403001.1;Ontology_term=GO:0009116;gbkey=CDS;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215085.1;locus_tag=AL42_RS08665;product=phosphoribosyltransferase family protein;protein_id=WP_003403001.1;transl_table=11 NZ_KK316784.1 RefSeq gene 663309 663650 . - . ID=gene-AL42_RS08670;Name=AL42_RS08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08670;old_locus_tag=AL42_00593 NZ_KK316784.1 Protein Homology CDS 663309 663650 . - 0 ID=cds-WP_003898507.1;Parent=gene-AL42_RS08670;Dbxref=GenBank:WP_003898507.1;Name=WP_003898507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215086.1;locus_tag=AL42_RS08670;product=hypothetical protein;protein_id=WP_003898507.1;transl_table=11 NZ_KK316784.1 RefSeq gene 664118 665509 . - . ID=gene-AL42_RS08675;Name=AL42_RS08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08675;old_locus_tag=AL42_00594 NZ_KK316784.1 Protein Homology CDS 664118 665509 . - 0 ID=cds-WP_003403007.1;Parent=gene-AL42_RS08675;Dbxref=GenBank:WP_003403007.1;Name=WP_003403007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215087.1;locus_tag=AL42_RS08675;product=nicotinate phosphoribosyltransferase;protein_id=WP_003403007.1;transl_table=11 NZ_KK316784.1 RefSeq gene 665519 666661 . - . ID=gene-AL42_RS08680;Name=AL42_RS08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08680;old_locus_tag=AL42_00595 NZ_KK316784.1 Protein Homology CDS 665519 666661 . - 0 ID=cds-WP_003403008.1;Parent=gene-AL42_RS08680;Dbxref=GenBank:WP_003403008.1;Name=WP_003403008.1;Ontology_term=GO:0045227,GO:0042578,GO:0046872;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=capsule polysaccharide biosynthetic process|0045227||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215088.1;locus_tag=AL42_RS08680;product=CapA family protein;protein_id=WP_003403008.1;transl_table=11 NZ_KK316784.1 RefSeq gene 666846 668012 . - . ID=gene-AL42_RS08685;Name=AL42_RS08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08685;old_locus_tag=AL42_00596 NZ_KK316784.1 Protein Homology CDS 666846 668012 . - 0 ID=cds-WP_003905341.1;Parent=gene-AL42_RS08685;Dbxref=GenBank:WP_003905341.1;Name=WP_003905341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215089.1;locus_tag=AL42_RS08685;product=FAD-binding domain;protein_id=WP_003905341.1;transl_table=11 NZ_KK316784.1 RefSeq gene 668115 669419 . + . ID=gene-AL42_RS0104235;Name=AL42_RS0104235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0104235;old_locus_tag=AL42_00597 NZ_KK316784.1 Protein Homology CDS 668115 669419 . + 0 ID=cds-WP_003403011.1;Parent=gene-AL42_RS0104235;Dbxref=GenBank:WP_003403011.1;Name=WP_003403011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215090.1;locus_tag=AL42_RS0104235;product=TIGR03086 family metal-binding protein;protein_id=WP_003403011.1;transl_table=11 NZ_KK316784.1 RefSeq gene 669433 670218 . + . ID=gene-AL42_RS08690;Name=AL42_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08690;old_locus_tag=AL42_00598 NZ_KK316784.1 Protein Homology CDS 669433 670218 . + 0 ID=cds-WP_003403012.1;Parent=gene-AL42_RS08690;Dbxref=GenBank:WP_003403012.1;Name=WP_003403012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215091.1;locus_tag=AL42_RS08690;product=VOC family protein;protein_id=WP_003403012.1;transl_table=11 NZ_KK316784.1 RefSeq gene 670263 674177 . - . ID=gene-AL42_RS08695;Name=AL42_RS08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08695;old_locus_tag=AL42_00599 NZ_KK316784.1 Protein Homology CDS 670263 674177 . - 0 ID=cds-WP_025234844.1;Parent=gene-AL42_RS08695;Dbxref=GenBank:WP_025234844.1;Name=WP_025234844.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177739.1;locus_tag=AL42_RS08695;product=PE family protein;protein_id=WP_025234844.1;transl_table=11 NZ_KK316784.1 RefSeq gene 674499 675257 . + . ID=gene-AL42_RS08700;Name=AL42_RS08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08700;old_locus_tag=AL42_00600 NZ_KK316784.1 Protein Homology CDS 674499 675257 . + 0 ID=cds-WP_003898511.1;Parent=gene-AL42_RS08700;Dbxref=GenBank:WP_003898511.1;Name=WP_003898511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215093.1;locus_tag=AL42_RS08700;product=Mut7-C RNAse domain-containing protein;protein_id=WP_003898511.1;transl_table=11 NZ_KK316784.1 RefSeq gene 675386 675877 . - . ID=gene-AL42_RS08705;Name=AL42_RS08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08705;old_locus_tag=AL42_00601 NZ_KK316784.1 Protein Homology CDS 675386 675877 . - 0 ID=cds-WP_003403017.1;Parent=gene-AL42_RS08705;Dbxref=GenBank:WP_003403017.1;Name=WP_003403017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215094.1;locus_tag=AL42_RS08705;product=mycobacterial cell wall protein Rv0580c;protein_id=WP_003403017.1;transl_table=11 NZ_KK316784.1 RefSeq gene 675971 676186 . + . ID=gene-AL42_RS08710;Name=vapB26;gbkey=Gene;gene=vapB26;gene_biotype=protein_coding;locus_tag=AL42_RS08710;old_locus_tag=AL42_00602 NZ_KK316784.1 Protein Homology CDS 675971 676186 . + 0 ID=cds-WP_003403039.1;Parent=gene-AL42_RS08710;Dbxref=GenBank:WP_003403039.1;Name=WP_003403039.1;gbkey=CDS;gene=vapB26;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215095.1;locus_tag=AL42_RS08710;product=type II toxin-antitoxin system antitoxin VapB26;protein_id=WP_003403039.1;transl_table=11 NZ_KK316784.1 RefSeq gene 676183 676590 . + . ID=gene-AL42_RS08715;Name=vapC26;gbkey=Gene;gene=vapC26;gene_biotype=protein_coding;locus_tag=AL42_RS08715;old_locus_tag=AL42_00603 NZ_KK316784.1 Protein Homology CDS 676183 676590 . + 0 ID=cds-WP_003403047.1;Parent=gene-AL42_RS08715;Dbxref=GenBank:WP_003403047.1;Name=WP_003403047.1;gbkey=CDS;gene=vapC26;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215096.1;locus_tag=AL42_RS08715;product=type II toxin-antitoxin system toxin ribonuclease C26;protein_id=WP_003403047.1;transl_table=11 NZ_KK316784.1 RefSeq gene 676650 677336 . - . ID=gene-AL42_RS08720;Name=lpqN;gbkey=Gene;gene=lpqN;gene_biotype=protein_coding;locus_tag=AL42_RS08720;old_locus_tag=AL42_00604 NZ_KK316784.1 Protein Homology CDS 676650 677336 . - 0 ID=cds-WP_003403052.1;Parent=gene-AL42_RS08720;Dbxref=GenBank:WP_003403052.1;Name=WP_003403052.1;gbkey=CDS;gene=lpqN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215097.1;locus_tag=AL42_RS08720;product=envelope biogenesis lipoprotein LpqN;protein_id=WP_003403052.1;transl_table=11 NZ_KK316784.1 RefSeq gene 677490 680123 . + . ID=gene-AL42_RS08725;Name=AL42_RS08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08725;old_locus_tag=AL42_00605 NZ_KK316784.1 Protein Homology CDS 677490 680123 . + 0 ID=cds-WP_003403055.1;Parent=gene-AL42_RS08725;Dbxref=GenBank:WP_003403055.1;Name=WP_003403055.1;Ontology_term=GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215098.1;locus_tag=AL42_RS08725;product=GH92 family glycosyl hydrolase;protein_id=WP_003403055.1;transl_table=11 NZ_KK316784.1 RefSeq gene 680146 682533 . - . ID=gene-AL42_RS08730;Name=AL42_RS08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08730;old_locus_tag=AL42_00606 NZ_KK316784.1 Protein Homology CDS 680146 682533 . - 0 ID=cds-WP_003900178.1;Parent=gene-AL42_RS08730;Dbxref=GenBank:WP_003900178.1;Name=WP_003900178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215099.1;locus_tag=AL42_RS08730;product=lysylphosphatidylglycerol synthase transmembrane domain-containing protein;protein_id=WP_003900178.1;transl_table=11 NZ_KK316784.1 RefSeq gene 682671 683393 . + . ID=gene-AL42_RS08735;Name=mce2R;gbkey=Gene;gene=mce2R;gene_biotype=protein_coding;locus_tag=AL42_RS08735;old_locus_tag=AL42_00607 NZ_KK316784.1 Protein Homology CDS 682671 683393 . + 0 ID=cds-WP_003403065.1;Parent=gene-AL42_RS08735;Dbxref=GenBank:WP_003403065.1;Name=WP_003403065.1;gbkey=CDS;gene=mce2R;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215100.1;locus_tag=AL42_RS08735;product=FadR family transcriptional regulator Mce2R;protein_id=WP_003403065.1;transl_table=11 NZ_KK316784.1 RefSeq gene 683390 684187 . + . ID=gene-AL42_RS08740;Name=AL42_RS08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08740;old_locus_tag=AL42_00608 NZ_KK316784.1 Protein Homology CDS 683390 684187 . + 0 ID=cds-WP_003403095.1;Parent=gene-AL42_RS08740;Dbxref=GenBank:WP_003403095.1;Name=WP_003403095.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215101.1;locus_tag=AL42_RS08740;product=MlaE family ABC transporter permease;protein_id=WP_003403095.1;transl_table=11 NZ_KK316784.1 RefSeq gene 684189 685076 . + . ID=gene-AL42_RS08745;Name=AL42_RS08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08745;old_locus_tag=AL42_00609 NZ_KK316784.1 Protein Homology CDS 684189 685076 . + 0 ID=cds-WP_003905347.1;Parent=gene-AL42_RS08745;Dbxref=GenBank:WP_003905347.1;Name=WP_003905347.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215102.1;locus_tag=AL42_RS08745;product=ABC transporter permease;protein_id=WP_003905347.1;transl_table=11 NZ_KK316784.1 RefSeq gene 685082 686296 . + . ID=gene-AL42_RS08750;Name=AL42_RS08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08750;old_locus_tag=AL42_00610 NZ_KK316784.1 Protein Homology CDS 685082 686296 . + 0 ID=cds-WP_003403104.1;Parent=gene-AL42_RS08750;Dbxref=GenBank:WP_003403104.1;Name=WP_003403104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177740.1;locus_tag=AL42_RS08750;product=MCE family protein;protein_id=WP_003403104.1;transl_table=11 NZ_KK316784.1 RefSeq gene 686293 687324 . + . ID=gene-AL42_RS0104240;Name=AL42_RS0104240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0104240;old_locus_tag=AL42_00611 NZ_KK316784.1 Protein Homology CDS 686293 687324 . + 0 ID=cds-WP_003403107.1;Parent=gene-AL42_RS0104240;Dbxref=GenBank:WP_003403107.1;Name=WP_003403107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003873596.1;locus_tag=AL42_RS0104240;product=MCE family protein;protein_id=WP_003403107.1;transl_table=11 NZ_KK316784.1 RefSeq gene 687321 688766 . + . ID=gene-AL42_RS08755;Name=AL42_RS08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08755;old_locus_tag=AL42_00613 NZ_KK316784.1 Protein Homology CDS 687321 688766 . + 0 ID=cds-WP_003900181.1;Parent=gene-AL42_RS08755;Dbxref=GenBank:WP_003900181.1;Name=WP_003900181.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215105.1;locus_tag=AL42_RS08755;product=virulence factor Mce family protein;protein_id=WP_003900181.1;transl_table=11 NZ_KK316784.1 RefSeq gene 688763 690289 . + . ID=gene-AL42_RS08760;Name=AL42_RS08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08760;old_locus_tag=AL42_00614 NZ_KK316784.1 Protein Homology CDS 688763 690289 . + 0 ID=cds-WP_003403112.1;Parent=gene-AL42_RS08760;Dbxref=GenBank:WP_003403112.1;Name=WP_003403112.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215106.1;locus_tag=AL42_RS08760;product=virulence factor Mce family protein;protein_id=WP_003403112.1;transl_table=11 NZ_KK316784.1 RefSeq gene 690352 691494 . + . ID=gene-AL42_RS08765;Name=lprL;gbkey=Gene;gene=lprL;gene_biotype=protein_coding;locus_tag=AL42_RS08765;old_locus_tag=AL42_00615 NZ_KK316784.1 Protein Homology CDS 690352 691494 . + 0 ID=cds-WP_003911253.1;Parent=gene-AL42_RS08765;Dbxref=GenBank:WP_003911253.1;Name=WP_003911253.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;gene=lprL;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911253.1;locus_tag=AL42_RS08765;product=virulence factor Mce family protein;protein_id=WP_003911253.1;transl_table=11 NZ_KK316784.1 RefSeq gene 691499 693049 . + . ID=gene-AL42_RS08770;Name=AL42_RS08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08770;old_locus_tag=AL42_00616 NZ_KK316784.1 Protein Homology CDS 691499 693049 . + 0 ID=cds-WP_031721789.1;Parent=gene-AL42_RS08770;Dbxref=GenBank:WP_031721789.1;Name=WP_031721789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215108.1;locus_tag=AL42_RS08770;product=MCE family protein;protein_id=WP_031721789.1;transl_table=11 NZ_KK316784.1 RefSeq gene 693101 693493 . - . ID=gene-AL42_RS08775;Name=vapC4;gbkey=Gene;gene=vapC4;gene_biotype=protein_coding;locus_tag=AL42_RS08775;old_locus_tag=AL42_00617 NZ_KK316784.1 Protein Homology CDS 693101 693493 . - 0 ID=cds-WP_003403122.1;Parent=gene-AL42_RS08775;Dbxref=GenBank:WP_003403122.1;Name=WP_003403122.1;gbkey=CDS;gene=vapC4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215109.1;locus_tag=AL42_RS08775;product=type II toxin-antitoxin system toxin ribonuclease C4;protein_id=WP_003403122.1;transl_table=11 NZ_KK316784.1 RefSeq gene 693490 693747 . - . ID=gene-AL42_RS08780;Name=vapB4;gbkey=Gene;gene=vapB4;gene_biotype=protein_coding;locus_tag=AL42_RS08780;old_locus_tag=AL42_00618 NZ_KK316784.1 Protein Homology CDS 693490 693747 . - 0 ID=cds-WP_003403125.1;Parent=gene-AL42_RS08780;Dbxref=GenBank:WP_003403125.1;Name=WP_003403125.1;gbkey=CDS;gene=vapB4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215110.1;locus_tag=AL42_RS08780;product=type II toxin-antitoxin system antitoxin VapB4;protein_id=WP_003403125.1;transl_table=11 NZ_KK316784.1 RefSeq gene 693930 695165 . - . ID=gene-AL42_RS08785;Name=AL42_RS08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08785;old_locus_tag=AL42_00619 NZ_KK316784.1 Protein Homology CDS 693930 695165 . - 0 ID=cds-WP_003403128.1;Parent=gene-AL42_RS08785;Dbxref=GenBank:WP_003403128.1;Name=WP_003403128.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215111.1;locus_tag=AL42_RS08785;product=ATP-binding protein;protein_id=WP_003403128.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 695267 695455 . + . ID=gene-AL42_RS27880;Name=AL42_RS27880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS27880;partial=true;pseudo=true;start_range=.,695267 NZ_KK316784.1 Protein Homology CDS 695267 695455 . + 0 ID=cds-AL42_RS27880;Parent=gene-AL42_RS27880;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013827543.1;locus_tag=AL42_RS27880;partial=true;product=hypothetical protein;pseudo=true;start_range=.,695267;transl_table=11 NZ_KK316784.1 RefSeq gene 695416 695829 . - . ID=gene-AL42_RS08790;Name=AL42_RS08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08790;old_locus_tag=AL42_00620 NZ_KK316784.1 Protein Homology CDS 695416 695829 . - 0 ID=cds-WP_003403137.1;Parent=gene-AL42_RS08790;Dbxref=GenBank:WP_003403137.1;Name=WP_003403137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215112.1;locus_tag=AL42_RS08790;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003403137.1;transl_table=11 NZ_KK316784.1 RefSeq gene 695826 696062 . - . ID=gene-AL42_RS08795;Name=vapB27;gbkey=Gene;gene=vapB27;gene_biotype=protein_coding;locus_tag=AL42_RS08795;old_locus_tag=AL42_00621 NZ_KK316784.1 Protein Homology CDS 695826 696062 . - 0 ID=cds-WP_003403139.1;Parent=gene-AL42_RS08795;Dbxref=GenBank:WP_003403139.1;Name=WP_003403139.1;gbkey=CDS;gene=vapB27;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215113.1;locus_tag=AL42_RS08795;product=type II toxin-antitoxin system antitoxin VapB27;protein_id=WP_003403139.1;transl_table=11 NZ_KK316784.1 RefSeq gene 696166 696672 . - . ID=gene-AL42_RS08800;Name=AL42_RS08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08800;old_locus_tag=AL42_00622 NZ_KK316784.1 Protein Homology CDS 696166 696672 . - 0 ID=cds-WP_003900973.1;Parent=gene-AL42_RS08800;Dbxref=GenBank:WP_003900973.1;Name=WP_003900973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900973.1;locus_tag=AL42_RS08800;product=two component system sensor kinase HK1;protein_id=WP_003900973.1;transl_table=11 NZ_KK316784.1 RefSeq gene 696786 697316 . - . ID=gene-AL42_RS08805;Name=AL42_RS08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08805;old_locus_tag=AL42_00623 NZ_KK316784.1 Protein Homology CDS 696786 697316 . - 0 ID=cds-WP_003917320.1;Parent=gene-AL42_RS08805;Dbxref=GenBank:WP_003917320.1;Name=WP_003917320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917320.1;locus_tag=AL42_RS08805;product=two component system sensor kinase HK2;protein_id=WP_003917320.1;transl_table=11 NZ_KK316784.1 RefSeq gene 697300 697995 . - . ID=gene-AL42_RS08810;Name=tcrA;gbkey=Gene;gene=tcrA;gene_biotype=protein_coding;locus_tag=AL42_RS08810;old_locus_tag=AL42_00624 NZ_KK316784.1 Protein Homology CDS 697300 697995 . - 0 ID=cds-WP_003918099.1;Parent=gene-AL42_RS08810;Dbxref=GenBank:WP_003918099.1;Name=WP_003918099.1;gbkey=CDS;gene=tcrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014585072.1;locus_tag=AL42_RS08810;product=two-component system response regulator TcrA;protein_id=WP_003918099.1;transl_table=11 NZ_KK316784.1 RefSeq gene 698118 698429 . + . ID=gene-AL42_RS08815;Name=AL42_RS08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08815;old_locus_tag=AL42_00625 NZ_KK316784.1 Protein Homology CDS 698118 698429 . + 0 ID=cds-WP_003403164.1;Parent=gene-AL42_RS08815;Dbxref=GenBank:WP_003403164.1;Name=WP_003403164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215117.1;locus_tag=AL42_RS08815;product=PepSY domain-containing protein;protein_id=WP_003403164.1;transl_table=11 NZ_KK316784.1 RefSeq gene 698501 699451 . + . ID=gene-AL42_RS08820;Name=lpqO;gbkey=Gene;gene=lpqO;gene_biotype=protein_coding;locus_tag=AL42_RS08820;old_locus_tag=AL42_00626 NZ_KK316784.1 Protein Homology CDS 698501 699451 . + 0 ID=cds-WP_003900184.1;Parent=gene-AL42_RS08820;Dbxref=GenBank:WP_003900184.1;Name=WP_003900184.1;gbkey=CDS;gene=lpqO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215118.1;locus_tag=AL42_RS08820;product=DUF1259 domain-containing protein;protein_id=WP_003900184.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 699504 699598 . - . ID=gene-AL42_RS28070;Name=AL42_RS28070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS28070;partial=true;pseudo=true;start_range=.,699504 NZ_KK316784.1 Protein Homology CDS 699504 699598 . - 0 ID=cds-AL42_RS28070;Parent=gene-AL42_RS28070;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215127.1;locus_tag=AL42_RS28070;partial=true;product=hypothetical protein;pseudo=true;start_range=.,699504;transl_table=11 NZ_KK316784.1 RefSeq gene 699692 700276 . + . ID=gene-AL42_RS08825;Name=AL42_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08825;old_locus_tag=AL42_00627 NZ_KK316784.1 Protein Homology CDS 699692 700276 . + 0 ID=cds-WP_003403171.1;Parent=gene-AL42_RS08825;Dbxref=GenBank:WP_003403171.1;Name=WP_003403171.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215119.2;locus_tag=AL42_RS08825;product=IS607-like element IS1536 family transposase;protein_id=WP_003403171.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 700278 700988 . + . ID=gene-AL42_RS08830;Name=tnpB;end_range=700988,.;gbkey=Gene;gene=tnpB;gene_biotype=pseudogene;locus_tag=AL42_RS08830;old_locus_tag=AL42_00628;partial=true;pseudo=true NZ_KK316784.1 Protein Homology CDS 700278 700988 . + 0 ID=cds-AL42_RS08830;Parent=gene-AL42_RS08830;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=700988,.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217494.1;locus_tag=AL42_RS08830;partial=true;product=IS607 family element RNA-guided endonuclease TnpB;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 700991 701461 . + . ID=gene-AL42_RS08835;Name=AL42_RS08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08835;old_locus_tag=AL42_00629 NZ_KK316784.1 Protein Homology CDS 700991 701461 . + 0 ID=cds-WP_003898523.1;Parent=gene-AL42_RS08835;Dbxref=GenBank:WP_003898523.1;Name=WP_003898523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898523.1;locus_tag=AL42_RS08835;product=hypothetical protein;protein_id=WP_003898523.1;transl_table=11 NZ_KK316784.1 RefSeq gene 701506 701751 . + . ID=gene-AL42_RS08840;Name=AL42_RS08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08840;old_locus_tag=AL42_00630 NZ_KK316784.1 Protein Homology CDS 701506 701751 . + 0 ID=cds-WP_003403184.1;Parent=gene-AL42_RS08840;Dbxref=GenBank:WP_003403184.1;Name=WP_003403184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215122.1;locus_tag=AL42_RS08840;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_003403184.1;transl_table=11 NZ_KK316784.1 RefSeq gene 701748 702149 . + . ID=gene-AL42_RS08845;Name=AL42_RS08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08845;old_locus_tag=AL42_00631 NZ_KK316784.1 Protein Homology CDS 701748 702149 . + 0 ID=cds-WP_003403187.1;Parent=gene-AL42_RS08845;Dbxref=GenBank:WP_003403187.1;Name=WP_003403187.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215123.1;locus_tag=AL42_RS08845;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003403187.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 702155 702319 . + . ID=gene-AL42_RS27455;Name=AL42_RS27455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS27455;old_locus_tag=AL42_00632;partial=true;pseudo=true;start_range=.,702155 NZ_KK316784.1 Protein Homology CDS 702155 702319 . + 0 ID=cds-AL42_RS27455;Parent=gene-AL42_RS27455;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015292309.1;locus_tag=AL42_RS27455;partial=true;product=hypothetical protein;pseudo=true;start_range=.,702155;transl_table=11 NZ_KK316784.1 RefSeq gene 702537 702704 . - . ID=gene-AL42_RS27885;Name=AL42_RS27885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27885 NZ_KK316784.1 Protein Homology CDS 702537 702704 . - 0 ID=cds-WP_077385191.1;Parent=gene-AL42_RS27885;Dbxref=GenBank:WP_077385191.1;Name=WP_077385191.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024098.6;locus_tag=AL42_RS27885;product=DUF3800 domain-containing protein;protein_id=WP_077385191.1;transl_table=11 NZ_KK316784.1 RefSeq gene 702728 703021 . + . ID=gene-AL42_RS27890;Name=AL42_RS27890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27890 NZ_KK316784.1 Protein Homology CDS 702728 703021 . + 0 ID=cds-WP_016719609.1;Parent=gene-AL42_RS27890;Dbxref=GenBank:WP_016719609.1;Name=WP_016719609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016719609.1;locus_tag=AL42_RS27890;product=hypothetical protein;protein_id=WP_016719609.1;transl_table=11 NZ_KK316784.1 RefSeq gene 703014 704171 . - . ID=gene-AL42_RS08855;Name=AL42_RS08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08855;old_locus_tag=AL42_00633 NZ_KK316784.1 Protein Homology CDS 703014 704171 . - 0 ID=cds-WP_003898524.1;Parent=gene-AL42_RS08855;Dbxref=GenBank:WP_003898524.1;Name=WP_003898524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215124.1;locus_tag=AL42_RS08855;product=hypothetical protein;protein_id=WP_003898524.1;transl_table=11 NZ_KK316784.1 RefSeq gene 704223 704444 . - . ID=gene-AL42_RS0104255;Name=AL42_RS0104255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0104255 NZ_KK316784.1 Protein Homology CDS 704223 704444 . - 0 ID=cds-WP_003898525.1;Parent=gene-AL42_RS0104255;Dbxref=GenBank:WP_003898525.1;Name=WP_003898525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215125.2;locus_tag=AL42_RS0104255;product=DUF4926 domain-containing protein;protein_id=WP_003898525.1;transl_table=11 NZ_KK316784.1 RefSeq gene 704586 705191 . + . ID=gene-AL42_RS08860;Name=AL42_RS08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08860;old_locus_tag=AL42_00635 NZ_KK316784.1 Protein Homology CDS 704586 705191 . + 0 ID=cds-WP_003898526.1;Parent=gene-AL42_RS08860;Dbxref=GenBank:WP_003898526.1;Name=WP_003898526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215126.1;locus_tag=AL42_RS08860;product=hypothetical protein;protein_id=WP_003898526.1;transl_table=11 NZ_KK316784.1 RefSeq gene 705210 707777 . - . ID=gene-AL42_RS08865;Name=AL42_RS08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08865;old_locus_tag=AL42_00636 NZ_KK316784.1 Protein Homology CDS 705210 707777 . - 0 ID=cds-WP_031721790.1;Parent=gene-AL42_RS08865;Dbxref=GenBank:WP_031721790.1;Name=WP_031721790.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215127.1;locus_tag=AL42_RS08865;product=SEC-C metal-binding domain-containing protein;protein_id=WP_031721790.1;transl_table=11 NZ_KK316784.1 RefSeq gene 707861 708610 . + . ID=gene-AL42_RS0104260;Name=AL42_RS0104260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0104260;old_locus_tag=AL42_00637 NZ_KK316784.1 Protein Homology CDS 707861 708610 . + 0 ID=cds-WP_003898528.1;Parent=gene-AL42_RS0104260;Dbxref=GenBank:WP_003898528.1;Name=WP_003898528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215128.2;locus_tag=AL42_RS0104260;product=hypothetical protein;protein_id=WP_003898528.1;transl_table=11 NZ_KK316784.1 RefSeq gene 708607 708849 . + . ID=gene-AL42_RS08870;Name=AL42_RS08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08870;old_locus_tag=AL42_00638 NZ_KK316784.1 Protein Homology CDS 708607 708849 . + 0 ID=cds-WP_003403210.1;Parent=gene-AL42_RS08870;Dbxref=GenBank:WP_003403210.1;Name=WP_003403210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215129.1;locus_tag=AL42_RS08870;product=hypothetical protein;protein_id=WP_003403210.1;transl_table=11 NZ_KK316784.1 RefSeq gene 708846 709112 . - . ID=gene-AL42_RS27895;Name=AL42_RS27895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27895;old_locus_tag=AL42_00639 NZ_KK316784.1 Protein Homology CDS 708846 709112 . - 0 ID=cds-WP_003898530.1;Parent=gene-AL42_RS27895;Dbxref=GenBank:WP_003898530.1;Name=WP_003898530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898530.1;locus_tag=AL42_RS27895;product=hypothetical protein;protein_id=WP_003898530.1;transl_table=11 NZ_KK316784.1 RefSeq gene 709044 709271 . + . ID=gene-AL42_RS08880;Name=AL42_RS08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08880;old_locus_tag=AL42_00640 NZ_KK316784.1 Protein Homology CDS 709044 709271 . + 0 ID=cds-WP_003403213.1;Parent=gene-AL42_RS08880;Dbxref=GenBank:WP_003403213.1;Name=WP_003403213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007409270.1;locus_tag=AL42_RS08880;product=antitoxin VapB29;protein_id=WP_003403213.1;transl_table=11 NZ_KK316784.1 RefSeq gene 709268 709669 . + . ID=gene-AL42_RS08885;Name=vapC29;gbkey=Gene;gene=vapC29;gene_biotype=protein_coding;locus_tag=AL42_RS08885;old_locus_tag=AL42_00641 NZ_KK316784.1 Protein Homology CDS 709268 709669 . + 0 ID=cds-WP_003403218.1;Parent=gene-AL42_RS08885;Dbxref=GenBank:WP_003403218.1;Name=WP_003403218.1;gbkey=CDS;gene=vapC29;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215131.1;locus_tag=AL42_RS08885;product=type II toxin-antitoxin system ribonuclease VapC29;protein_id=WP_003403218.1;transl_table=11 NZ_KK316784.1 RefSeq gene 709900 710493 . + . ID=gene-AL42_RS28075;Name=AL42_RS28075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS28075;old_locus_tag=AL42_00642 NZ_KK316784.1 Protein Homology CDS 709900 710493 . + 0 ID=cds-WP_015629632.1;Parent=gene-AL42_RS28075;Dbxref=GenBank:WP_015629632.1;Name=WP_015629632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015629632.1;locus_tag=AL42_RS28075;product=HIT family protein;protein_id=WP_015629632.1;transl_table=11 NZ_KK316784.1 RefSeq gene 710511 710981 . + . ID=gene-AL42_RS28080;Name=AL42_RS28080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS28080;old_locus_tag=AL42_00643 NZ_KK316784.1 Protein Homology CDS 710511 710981 . + 0 ID=cds-WP_003900190.1;Parent=gene-AL42_RS28080;Dbxref=GenBank:WP_003900190.1;Name=WP_003900190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012054156.1;locus_tag=AL42_RS28080;product=HIT family protein;protein_id=WP_003900190.1;transl_table=11 NZ_KK316784.1 RefSeq gene 710978 712069 . + . ID=gene-AL42_RS08890;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=AL42_RS08890;old_locus_tag=AL42_00644 NZ_KK316784.1 Protein Homology CDS 710978 712069 . + 0 ID=cds-WP_003900977.1;Parent=gene-AL42_RS08890;Dbxref=GenBank:WP_003900977.1;Name=WP_003900977.1;gbkey=CDS;gene=galK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215134.1;locus_tag=AL42_RS08890;product=galactokinase;protein_id=WP_003900977.1;transl_table=11 NZ_KK316784.1 RefSeq gene 712464 713528 . + . ID=gene-AL42_RS08895;Name=AL42_RS08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08895;old_locus_tag=AL42_00645 NZ_KK316784.1 Protein Homology CDS 712464 713528 . + 0 ID=cds-WP_003898532.1;Parent=gene-AL42_RS08895;Dbxref=GenBank:WP_003898532.1;Name=WP_003898532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215135.1;locus_tag=AL42_RS08895;product=zinc ribbon domain-containing protein;protein_id=WP_003898532.1;transl_table=11 NZ_KK316784.1 RefSeq gene 713632 714579 . + . ID=gene-AL42_RS08900;Name=AL42_RS08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08900;old_locus_tag=AL42_00646 NZ_KK316784.1 Protein Homology CDS 713632 714579 . + 0 ID=cds-WP_003403232.1;Parent=gene-AL42_RS08900;Dbxref=GenBank:WP_003403232.1;Name=WP_003403232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215136.2;locus_tag=AL42_RS08900;product=DUF732 domain-containing protein;protein_id=WP_003403232.1;transl_table=11 NZ_KK316784.1 RefSeq gene 714672 714926 . + . ID=gene-AL42_RS08905;Name=vapB30;gbkey=Gene;gene=vapB30;gene_biotype=protein_coding;locus_tag=AL42_RS08905;old_locus_tag=AL42_00647 NZ_KK316784.1 Protein Homology CDS 714672 714926 . + 0 ID=cds-WP_003403235.1;Parent=gene-AL42_RS08905;Dbxref=GenBank:WP_003403235.1;Name=WP_003403235.1;gbkey=CDS;gene=vapB30;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215137.1;locus_tag=AL42_RS08905;product=type II toxin-antitoxin system antitoxin VapB30;protein_id=WP_003403235.1;transl_table=11 NZ_KK316784.1 RefSeq gene 714926 715321 . + . ID=gene-AL42_RS08910;Name=vapC30;gbkey=Gene;gene=vapC30;gene_biotype=protein_coding;locus_tag=AL42_RS08910;old_locus_tag=AL42_00648 NZ_KK316784.1 Protein Homology CDS 714926 715321 . + 0 ID=cds-WP_003403236.1;Parent=gene-AL42_RS08910;Dbxref=GenBank:WP_003403236.1;Name=WP_003403236.1;gbkey=CDS;gene=vapC30;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215138.1;locus_tag=AL42_RS08910;product=type II toxin-antitoxin system toxin ribonuclease C30;protein_id=WP_003403236.1;transl_table=11 NZ_KK316784.1 RefSeq gene 715415 716155 . - . ID=gene-AL42_RS08915;Name=AL42_RS08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08915;old_locus_tag=AL42_00649 NZ_KK316784.1 Protein Homology CDS 715415 716155 . - 0 ID=cds-WP_003403239.1;Parent=gene-AL42_RS08915;Dbxref=GenBank:WP_003403239.1;Name=WP_003403239.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215139.1;locus_tag=AL42_RS08915;product=TVP38/TMEM64 family protein;protein_id=WP_003403239.1;transl_table=11 NZ_KK316784.1 RefSeq gene 716287 716547 . + . ID=gene-AL42_RS08920;Name=AL42_RS08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08920;old_locus_tag=AL42_00650 NZ_KK316784.1 Protein Homology CDS 716287 716547 . + 0 ID=cds-WP_003403244.1;Parent=gene-AL42_RS08920;Dbxref=GenBank:WP_003403244.1;Name=WP_003403244.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215140.1;locus_tag=AL42_RS08920;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_003403244.1;transl_table=11 NZ_KK316784.1 RefSeq gene 716544 716951 . + . ID=gene-AL42_RS08925;Name=AL42_RS08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08925;old_locus_tag=AL42_00651 NZ_KK316784.1 Protein Homology CDS 716544 716951 . + 0 ID=cds-WP_003403246.1;Parent=gene-AL42_RS08925;Dbxref=GenBank:WP_003403246.1;Name=WP_003403246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215141.1;locus_tag=AL42_RS08925;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003403246.1;transl_table=11 NZ_KK316784.1 RefSeq gene 717023 718174 . - . ID=gene-AL42_RS08930;Name=AL42_RS08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08930;old_locus_tag=AL42_00652 NZ_KK316784.1 Protein Homology CDS 717023 718174 . - 0 ID=cds-WP_031721791.1;Parent=gene-AL42_RS08930;Dbxref=GenBank:WP_031721791.1;Name=WP_031721791.1;Ontology_term=GO:0007165;gbkey=CDS;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215142.1;locus_tag=AL42_RS08930;product=FIST signal transduction protein;protein_id=WP_031721791.1;transl_table=11 NZ_KK316784.1 RefSeq gene 718267 719994 . - . ID=gene-AL42_RS08935;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=AL42_RS08935;old_locus_tag=AL42_00653 NZ_KK316784.1 Protein Homology CDS 718267 719994 . - 0 ID=cds-WP_003901883.1;Parent=gene-AL42_RS08935;Dbxref=GenBank:WP_003901883.1;Name=WP_003901883.1;Ontology_term=GO:0006281,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215143.1;locus_tag=AL42_RS08935;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_003901883.1;transl_table=11 NZ_KK316784.1 RefSeq gene 719991 723275 . - . ID=gene-AL42_RS08940;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=AL42_RS08940;old_locus_tag=AL42_00654 NZ_KK316784.1 Protein Homology CDS 719991 723275 . - 0 ID=cds-WP_003905355.1;Parent=gene-AL42_RS08940;Dbxref=GenBank:WP_003905355.1;Name=WP_003905355.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524,GO:0008854,GO:0009338;gbkey=CDS;gene=recB;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215144.1;locus_tag=AL42_RS08940;product=exodeoxyribonuclease V subunit beta;protein_id=WP_003905355.1;transl_table=11 NZ_KK316784.1 RefSeq gene 723275 726568 . - . ID=gene-AL42_RS08945;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=AL42_RS08945;old_locus_tag=AL42_00655 NZ_KK316784.1 Protein Homology CDS 723275 726568 . - 0 ID=cds-WP_003900193.1;Parent=gene-AL42_RS08945;Dbxref=GenBank:WP_003900193.1;Name=WP_003900193.1;Ontology_term=GO:0006281,GO:0006310,GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215145.1;locus_tag=AL42_RS08945;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_003900193.1;transl_table=11 NZ_KK316784.1 RefSeq gene 726845 727540 . - . ID=gene-AL42_RS08950;Name=AL42_RS08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08950;old_locus_tag=AL42_00656 NZ_KK316784.1 Protein Homology CDS 726845 727540 . - 0 ID=cds-WP_003403259.1;Parent=gene-AL42_RS08950;Dbxref=GenBank:WP_003403259.1;Name=WP_003403259.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215146.1;locus_tag=AL42_RS08950;product=crotonase/enoyl-CoA hydratase family protein;protein_id=WP_003403259.1;transl_table=11 NZ_KK316784.1 RefSeq gene 727589 728428 . - . ID=gene-AL42_RS08955;Name=AL42_RS08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08955;old_locus_tag=AL42_00657 NZ_KK316784.1 Protein Homology CDS 727589 728428 . - 0 ID=cds-WP_031721792.1;Parent=gene-AL42_RS08955;Dbxref=GenBank:WP_031721792.1;Name=WP_031721792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215147.1;locus_tag=AL42_RS08955;product=hypothetical protein;protein_id=WP_031721792.1;transl_table=11 NZ_KK316784.1 RefSeq gene 728582 729295 . - . ID=gene-AL42_RS08960;Name=AL42_RS08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08960;old_locus_tag=AL42_00658 NZ_KK316784.1 Protein Homology CDS 728582 729295 . - 0 ID=cds-WP_003403266.1;Parent=gene-AL42_RS08960;Dbxref=GenBank:WP_003403266.1;Name=WP_003403266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215148.1;locus_tag=AL42_RS08960;product=MBL fold metallo-hydrolase;protein_id=WP_003403266.1;transl_table=11 NZ_KK316784.1 RefSeq gene 729414 729626 . + . ID=gene-AL42_RS08965;Name=AL42_RS08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS08965;old_locus_tag=AL42_00659 NZ_KK316784.1 Protein Homology CDS 729414 729626 . + 0 ID=cds-WP_003898537.1;Parent=gene-AL42_RS08965;Dbxref=GenBank:WP_003898537.1;Name=WP_003898537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015287878.1;locus_tag=AL42_RS08965;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_003898537.1;transl_table=11 NZ_KK316784.1 RefSeq gene 729756 729828 . + . ID=gene-AL42_RS08970;Name=AL42_RS08970;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL42_RS08970;old_locus_tag=AL42_00660 NZ_KK316784.1 tRNAscan-SE tRNA 729756 729828 . + . ID=rna-AL42_RS08970;Parent=gene-AL42_RS08970;anticodon=(pos:729789..729791);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS08970;product=tRNA-Thr NZ_KK316784.1 tRNAscan-SE exon 729756 729828 . + . ID=exon-AL42_RS08970-1;Parent=rna-AL42_RS08970;anticodon=(pos:729789..729791);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS08970;product=tRNA-Thr NZ_KK316784.1 RefSeq gene 729865 729938 . + . ID=gene-AL42_RS08975;Name=AL42_RS08975;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL42_RS08975;old_locus_tag=AL42_00661 NZ_KK316784.1 tRNAscan-SE tRNA 729865 729938 . + . ID=rna-AL42_RS08975;Parent=gene-AL42_RS08975;anticodon=(pos:729899..729901);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS08975;product=tRNA-Met NZ_KK316784.1 tRNAscan-SE exon 729865 729938 . + . ID=exon-AL42_RS08975-1;Parent=rna-AL42_RS08975;anticodon=(pos:729899..729901);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS08975;product=tRNA-Met NZ_KK316784.1 RefSeq gene 729974 730141 . + . ID=gene-AL42_RS08980;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=AL42_RS08980;old_locus_tag=AL42_00662 NZ_KK316784.1 Protein Homology CDS 729974 730141 . + 0 ID=cds-WP_003898538.1;Parent=gene-AL42_RS08980;Dbxref=GenBank:WP_003898538.1;Name=WP_003898538.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177630.1;locus_tag=AL42_RS08980;product=50S ribosomal protein L33;protein_id=WP_003898538.1;transl_table=11 NZ_KK316784.1 RefSeq gene 730192 730668 . + . ID=gene-AL42_RS08985;Name=hadA;gbkey=Gene;gene=hadA;gene_biotype=protein_coding;locus_tag=AL42_RS08985;old_locus_tag=AL42_00663 NZ_KK316784.1 Protein Homology CDS 730192 730668 . + 0 ID=cds-WP_003403277.1;Parent=gene-AL42_RS08985;Dbxref=GenBank:WP_003403277.1;Name=WP_003403277.1;gbkey=CDS;gene=hadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215149.1;locus_tag=AL42_RS08985;product=(3R)-hydroxyacyl-ACP dehydratase subunit HadA;protein_id=WP_003403277.1;transl_table=11 NZ_KK316784.1 RefSeq gene 730655 731083 . + . ID=gene-AL42_RS08990;Name=hadB;gbkey=Gene;gene=hadB;gene_biotype=protein_coding;locus_tag=AL42_RS08990;old_locus_tag=AL42_00664 NZ_KK316784.1 Protein Homology CDS 730655 731083 . + 0 ID=cds-WP_003903106.1;Parent=gene-AL42_RS08990;Dbxref=GenBank:WP_003903106.1;Name=WP_003903106.1;Ontology_term=GO:0071768;gbkey=CDS;gene=hadB;go_process=mycolic acid biosynthetic process|0071768||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215150.1;locus_tag=AL42_RS08990;product=(3R)-hydroxyacyl-ACP dehydratase subunit HadB;protein_id=WP_003903106.1;transl_table=11 NZ_KK316784.1 RefSeq gene 731087 731587 . + . ID=gene-AL42_RS08995;Name=hadC;gbkey=Gene;gene=hadC;gene_biotype=protein_coding;locus_tag=AL42_RS08995;old_locus_tag=AL42_00665 NZ_KK316784.1 Protein Homology CDS 731087 731587 . + 0 ID=cds-WP_003403282.1;Parent=gene-AL42_RS08995;Dbxref=GenBank:WP_003403282.1;Name=WP_003403282.1;gbkey=CDS;gene=hadC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215151.1;locus_tag=AL42_RS08995;product=(3R)-hydroxyacyl-ACP dehydratase subunit HadC;protein_id=WP_003403282.1;transl_table=11 NZ_KK316784.1 RefSeq gene 731786 731858 . + . ID=gene-AL42_RS09000;Name=AL42_RS09000;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL42_RS09000;old_locus_tag=AL42_00666 NZ_KK316784.1 tRNAscan-SE tRNA 731786 731858 . + . ID=rna-AL42_RS09000;Parent=gene-AL42_RS09000;anticodon=(pos:731819..731821);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS09000;product=tRNA-Trp NZ_KK316784.1 tRNAscan-SE exon 731786 731858 . + . ID=exon-AL42_RS09000-1;Parent=rna-AL42_RS09000;anticodon=(pos:731819..731821);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS09000;product=tRNA-Trp NZ_KK316784.1 RefSeq gene 731999 732484 . + . ID=gene-AL42_RS09005;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=AL42_RS09005;old_locus_tag=AL42_00667 NZ_KK316784.1 Protein Homology CDS 731999 732484 . + 0 ID=cds-WP_003403284.1;Parent=gene-AL42_RS09005;Dbxref=GenBank:WP_003403284.1;Name=WP_003403284.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177743.1;locus_tag=AL42_RS09005;product=preprotein translocase subunit SecE;protein_id=WP_003403284.1;transl_table=11 NZ_KK316784.1 RefSeq gene 732516 733232 . + . ID=gene-AL42_RS09010;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=AL42_RS09010;old_locus_tag=AL42_00668 NZ_KK316784.1 Protein Homology CDS 732516 733232 . + 0 ID=cds-WP_003403288.1;Parent=gene-AL42_RS09010;Dbxref=GenBank:WP_003403288.1;Name=WP_003403288.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215153.1;locus_tag=AL42_RS09010;product=transcription termination/antitermination protein NusG;protein_id=WP_003403288.1;transl_table=11 NZ_KK316784.1 RefSeq gene 733284 733712 . + . ID=gene-AL42_RS09015;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=AL42_RS09015;old_locus_tag=AL42_00669 NZ_KK316784.1 Protein Homology CDS 733284 733712 . + 0 ID=cds-WP_003403291.1;Parent=gene-AL42_RS09015;Dbxref=GenBank:WP_003403291.1;Name=WP_003403291.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215154.1;locus_tag=AL42_RS09015;product=50S ribosomal protein L11;protein_id=WP_003403291.1;transl_table=11 NZ_KK316784.1 RefSeq gene 733779 734486 . + . ID=gene-AL42_RS09020;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=AL42_RS09020;old_locus_tag=AL42_00670 NZ_KK316784.1 Protein Homology CDS 733779 734486 . + 0 ID=cds-WP_003403292.1;Parent=gene-AL42_RS09020;Dbxref=GenBank:WP_003403292.1;Name=WP_003403292.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215155.1;locus_tag=AL42_RS09020;product=50S ribosomal protein L1;protein_id=WP_003403292.1;transl_table=11 NZ_KK316784.1 RefSeq gene 734560 735465 . - . ID=gene-AL42_RS09025;Name=mmaA4;gbkey=Gene;gene=mmaA4;gene_biotype=protein_coding;locus_tag=AL42_RS09025;old_locus_tag=AL42_00671 NZ_KK316784.1 Protein Homology CDS 734560 735465 . - 0 ID=cds-WP_003900195.1;Parent=gene-AL42_RS09025;Dbxref=GenBank:WP_003900195.1;Name=WP_003900195.1;gbkey=CDS;gene=mmaA4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215156.1;locus_tag=AL42_RS09025;product=hydroxymycolate synthase MmaA4;protein_id=WP_003900195.1;transl_table=11 NZ_KK316784.1 RefSeq gene 735530 736411 . - . ID=gene-AL42_RS09030;Name=mmaA3;gbkey=Gene;gene=mmaA3;gene_biotype=protein_coding;locus_tag=AL42_RS09030;old_locus_tag=AL42_00672 NZ_KK316784.1 Protein Homology CDS 735530 736411 . - 0 ID=cds-WP_003403302.1;Parent=gene-AL42_RS09030;Dbxref=GenBank:WP_003403302.1;Name=WP_003403302.1;gbkey=CDS;gene=mmaA3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215157.1;locus_tag=AL42_RS09030;product=methoxy mycolic acid synthase MmaA3;protein_id=WP_003403302.1;transl_table=11 NZ_KK316784.1 RefSeq gene 736559 737422 . - . ID=gene-AL42_RS09035;Name=mmaA2;gbkey=Gene;gene=mmaA2;gene_biotype=protein_coding;locus_tag=AL42_RS09035;old_locus_tag=AL42_00673 NZ_KK316784.1 Protein Homology CDS 736559 737422 . - 0 ID=cds-WP_003905358.1;Parent=gene-AL42_RS09035;Dbxref=GenBank:WP_003905358.1;Name=WP_003905358.1;gbkey=CDS;gene=mmaA2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215158.1;locus_tag=AL42_RS09035;product=cyclopropane mycolic acid synthase MmaA2;protein_id=WP_003905358.1;transl_table=11 NZ_KK316784.1 RefSeq gene 737589 738449 . - . ID=gene-AL42_RS09040;Name=mmaA1;gbkey=Gene;gene=mmaA1;gene_biotype=protein_coding;locus_tag=AL42_RS09040;old_locus_tag=AL42_00674 NZ_KK316784.1 Protein Homology CDS 737589 738449 . - 0 ID=cds-WP_003403310.1;Parent=gene-AL42_RS09040;Dbxref=GenBank:WP_003403310.1;Name=WP_003403310.1;gbkey=CDS;gene=mmaA1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215159.1;locus_tag=AL42_RS09040;product=mycolic acid methyltransferase MmaA1;protein_id=WP_003403310.1;transl_table=11 NZ_KK316784.1 RefSeq gene 738496 739401 . - . ID=gene-AL42_RS09045;Name=lipG;gbkey=Gene;gene=lipG;gene_biotype=protein_coding;locus_tag=AL42_RS09045;old_locus_tag=AL42_00675 NZ_KK316784.1 Protein Homology CDS 738496 739401 . - 0 ID=cds-WP_003403314.1;Parent=gene-AL42_RS09045;Dbxref=GenBank:WP_003403314.1;Name=WP_003403314.1;gbkey=CDS;gene=lipG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215160.1;locus_tag=AL42_RS09045;product=lipase/esterase LipG;protein_id=WP_003403314.1;transl_table=11 NZ_KK316784.1 RefSeq gene 739413 740759 . - . ID=gene-AL42_RS09050;Name=AL42_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09050;old_locus_tag=AL42_00676 NZ_KK316784.1 Protein Homology CDS 739413 740759 . - 0 ID=cds-WP_003904450.1;Parent=gene-AL42_RS09050;Dbxref=GenBank:WP_003904450.1;Name=WP_003904450.1;Ontology_term=GO:0006468,GO:0004672,GO:0005524;gbkey=CDS;go_function=protein kinase activity|0004672||IEA,ATP binding|0005524||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015292344.1;locus_tag=AL42_RS09050;product=ABC1 kinase family protein;protein_id=WP_003904450.1;transl_table=11 NZ_KK316784.1 RefSeq gene 740965 745161 . + . ID=gene-AL42_RS09055;Name=AL42_RS09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09055;old_locus_tag=AL42_00677 NZ_KK316784.1 Protein Homology CDS 740965 745161 . + 0 ID=cds-WP_003917325.1;Parent=gene-AL42_RS09055;Dbxref=GenBank:WP_003917325.1;Name=WP_003917325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013988757.1;locus_tag=AL42_RS09055;product=glycoside hydrolase family 38 N-terminal domain-containing protein;protein_id=WP_003917325.1;transl_table=11 NZ_KK316784.1 RefSeq gene 745158 745832 . + . ID=gene-AL42_RS09060;Name=AL42_RS09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09060;old_locus_tag=AL42_00678 NZ_KK316784.1 Protein Homology CDS 745158 745832 . + 0 ID=cds-WP_003403326.1;Parent=gene-AL42_RS09060;Dbxref=GenBank:WP_003403326.1;Name=WP_003403326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177744.1;locus_tag=AL42_RS09060;product=DUF7158 domain-containing protein;protein_id=WP_003403326.1;transl_table=11 NZ_KK316784.1 RefSeq gene 745832 746740 . + . ID=gene-AL42_RS09065;Name=AL42_RS09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09065;old_locus_tag=AL42_00679 NZ_KK316784.1 Protein Homology CDS 745832 746740 . + 0 ID=cds-WP_003403330.1;Parent=gene-AL42_RS09065;Dbxref=GenBank:WP_003403330.1;Name=WP_003403330.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215164.1;locus_tag=AL42_RS09065;product=ROK family protein;protein_id=WP_003403330.1;transl_table=11 NZ_KK316784.1 RefSeq gene 747071 747607 . + . ID=gene-AL42_RS09070;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=AL42_RS09070;old_locus_tag=AL42_00680 NZ_KK316784.1 Protein Homology CDS 747071 747607 . + 0 ID=cds-WP_003403341.1;Parent=gene-AL42_RS09070;Dbxref=GenBank:WP_003403341.1;Name=WP_003403341.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215165.1;locus_tag=AL42_RS09070;product=50S ribosomal protein L10;protein_id=WP_003403341.1;transl_table=11 NZ_KK316784.1 RefSeq gene 747644 748036 . + . ID=gene-AL42_RS09075;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=AL42_RS09075;old_locus_tag=AL42_00681 NZ_KK316784.1 Protein Homology CDS 747644 748036 . + 0 ID=cds-WP_003403353.1;Parent=gene-AL42_RS09075;Dbxref=GenBank:WP_003403353.1;Name=WP_003403353.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215166.1;locus_tag=AL42_RS09075;product=50S ribosomal protein L7/L12;protein_id=WP_003403353.1;transl_table=11 NZ_KK316784.1 RefSeq gene 748029 748724 . - . ID=gene-AL42_RS09080;Name=AL42_RS09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09080;old_locus_tag=AL42_00682 NZ_KK316784.1 Protein Homology CDS 748029 748724 . - 0 ID=cds-WP_003403355.1;Parent=gene-AL42_RS09080;Dbxref=GenBank:WP_003403355.1;Name=WP_003403355.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215167.1;locus_tag=AL42_RS09080;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003403355.1;transl_table=11 NZ_KK316784.1 RefSeq gene 748795 750300 . + . ID=gene-AL42_RS09085;Name=AL42_RS09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09085;old_locus_tag=AL42_00683 NZ_KK316784.1 Protein Homology CDS 748795 750300 . + 0 ID=cds-WP_003403360.1;Parent=gene-AL42_RS09085;Dbxref=GenBank:WP_003403360.1;Name=WP_003403360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215168.1;locus_tag=AL42_RS09085;product=carotenoid cleavage oxygenase;protein_id=WP_003403360.1;transl_table=11 NZ_KK316784.1 RefSeq gene 750381 751391 . + . ID=gene-AL42_RS09090;Name=mkl;gbkey=Gene;gene=mkl;gene_biotype=protein_coding;locus_tag=AL42_RS09090;old_locus_tag=AL42_00684 NZ_KK316784.1 Protein Homology CDS 750381 751391 . + 0 ID=cds-WP_003911248.1;Parent=gene-AL42_RS09090;Dbxref=GenBank:WP_003911248.1;Name=WP_003911248.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=mkl;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911248.1;locus_tag=AL42_RS09090;product=ABC transporter ATP-binding protein;protein_id=WP_003911248.1;transl_table=11 NZ_KK316784.1 RefSeq gene 751779 752162 . - . ID=gene-AL42_RS09095;Name=AL42_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09095;old_locus_tag=AL42_00685 NZ_KK316784.1 Protein Homology CDS 751779 752162 . - 0 ID=cds-WP_003403365.1;Parent=gene-AL42_RS09095;Dbxref=GenBank:WP_003403365.1;Name=WP_003403365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215170.1;locus_tag=AL42_RS09095;product=ribonuclease VapC6;protein_id=WP_003403365.1;transl_table=11 NZ_KK316784.1 RefSeq gene 752257 752412 . - . ID=gene-AL42_RS09100;Name=AL42_RS09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09100;old_locus_tag=AL42_00686 NZ_KK316784.1 Protein Homology CDS 752257 752412 . - 0 ID=cds-WP_003403368.1;Parent=gene-AL42_RS09100;Dbxref=GenBank:WP_003403368.1;Name=WP_003403368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215171.1;locus_tag=AL42_RS09100;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_003403368.1;transl_table=11 NZ_KK316784.1 RefSeq gene 752488 753204 . - . ID=gene-AL42_RS09105;Name=AL42_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09105;old_locus_tag=AL42_00687 NZ_KK316784.1 Protein Homology CDS 752488 753204 . - 0 ID=cds-WP_003403371.1;Parent=gene-AL42_RS09105;Dbxref=GenBank:WP_003403371.1;Name=WP_003403371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215172.1;locus_tag=AL42_RS09105;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_003403371.1;transl_table=11 NZ_KK316784.1 RefSeq gene 753480 753788 . - . ID=gene-AL42_RS09110;Name=AL42_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09110;old_locus_tag=AL42_00688 NZ_KK316784.1 Protein Homology CDS 753480 753788 . - 0 ID=cds-WP_003403376.1;Parent=gene-AL42_RS09110;Dbxref=GenBank:WP_003403376.1;Name=WP_003403376.1;Ontology_term=GO:0006402,GO:0016075,GO:0003677,GO:0003723,GO:0004521;gbkey=CDS;go_function=DNA binding|0003677||IEA,RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;go_process=mRNA catabolic process|0006402||IEA,rRNA catabolic process|0016075||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215173.1;locus_tag=AL42_RS09110;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=WP_003403376.1;transl_table=11 NZ_KK316784.1 RefSeq gene 753775 754020 . - . ID=gene-AL42_RS09115;Name=AL42_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09115;old_locus_tag=AL42_00689 NZ_KK316784.1 Protein Homology CDS 753775 754020 . - 0 ID=cds-WP_003403381.1;Parent=gene-AL42_RS09115;Dbxref=GenBank:WP_003403381.1;Name=WP_003403381.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215174.1;locus_tag=AL42_RS09115;product=ribbon-helix-helix protein%2C CopG family;protein_id=WP_003403381.1;transl_table=11 NZ_KK316784.1 RefSeq gene 754130 754567 . - . ID=gene-AL42_RS09120;Name=AL42_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09120;old_locus_tag=AL42_00690 NZ_KK316784.1 Protein Homology CDS 754130 754567 . - 0 ID=cds-WP_003403386.1;Parent=gene-AL42_RS09120;Dbxref=GenBank:WP_003403386.1;Name=WP_003403386.1;Ontology_term=GO:0004540,GO:0046872,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215175.1;locus_tag=AL42_RS09120;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003403386.1;transl_table=11 NZ_KK316784.1 RefSeq gene 754564 754818 . - . ID=gene-AL42_RS0104285;Name=AL42_RS0104285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0104285;old_locus_tag=AL42_00691 NZ_KK316784.1 Protein Homology CDS 754564 754818 . - 0 ID=cds-WP_003911263.1;Parent=gene-AL42_RS0104285;Dbxref=GenBank:WP_003911263.1;Name=WP_003911263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215176.2;locus_tag=AL42_RS0104285;product=antitoxin VapB7;protein_id=WP_003911263.1;transl_table=11 NZ_KK316784.1 RefSeq gene 754932 757295 . + . ID=gene-AL42_RS09125;Name=atsD;gbkey=Gene;gene=atsD;gene_biotype=protein_coding;locus_tag=AL42_RS09125;old_locus_tag=AL42_00692 NZ_KK316784.1 Protein Homology CDS 754932 757295 . + 0 ID=cds-WP_003901895.1;Parent=gene-AL42_RS09125;Dbxref=GenBank:WP_003901895.1;Name=WP_003901895.1;gbkey=CDS;gene=atsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215177.1;locus_tag=AL42_RS09125;product=arylsulfatase AtsD;protein_id=WP_003901895.1;transl_table=11 NZ_KK316784.1 RefSeq gene 757358 757684 . + . ID=gene-AL42_RS09130;Name=AL42_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09130;old_locus_tag=AL42_00693 NZ_KK316784.1 Protein Homology CDS 757358 757684 . + 0 ID=cds-WP_003403401.1;Parent=gene-AL42_RS09130;Dbxref=GenBank:WP_003403401.1;Name=WP_003403401.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: protein motif:HMM:TIGR01552.1;locus_tag=AL42_RS09130;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_003403401.1;transl_table=11 NZ_KK316784.1 RefSeq gene 757596 757934 . + . ID=gene-AL42_RS09135;Name=AL42_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09135;old_locus_tag=AL42_00694 NZ_KK316784.1 Protein Homology CDS 757596 757934 . + 0 ID=cds-WP_003403405.1;Parent=gene-AL42_RS09135;Dbxref=GenBank:WP_003403405.1;Name=WP_003403405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215179.1;locus_tag=AL42_RS09135;product=PIN domain-containing protein;protein_id=WP_003403405.1;transl_table=11 NZ_KK316784.1 RefSeq gene 757931 758104 . + . ID=gene-AL42_RS09140;Name=AL42_RS09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09140;old_locus_tag=AL42_00695 NZ_KK316784.1 Protein Homology CDS 757931 758104 . + 0 ID=cds-WP_003898549.1;Parent=gene-AL42_RS09140;Dbxref=GenBank:WP_003898549.1;Name=WP_003898549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215180.1;locus_tag=AL42_RS09140;product=hypothetical protein;protein_id=WP_003898549.1;transl_table=11 NZ_KK316784.1 RefSeq gene 758602 762120 . + . ID=gene-AL42_RS09145;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=AL42_RS09145;old_locus_tag=AL42_00696 NZ_KK316784.1 Protein Homology CDS 758602 762120 . + 0 ID=cds-WP_003900992.1;Parent=gene-AL42_RS09145;Dbxref=GenBank:WP_003900992.1;Name=WP_003900992.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0032549;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,ribonucleoside binding|0032549||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215181.1;locus_tag=AL42_RS09145;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_003900992.1;transl_table=11 NZ_KK316784.1 RefSeq gene 762165 766115 . + . ID=gene-AL42_RS09150;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=AL42_RS09150;old_locus_tag=AL42_00697 NZ_KK316784.1 Protein Homology CDS 762165 766115 . + 0 ID=cds-WP_003403413.1;Parent=gene-AL42_RS09150;Dbxref=GenBank:WP_003403413.1;Name=WP_003403413.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003892756.1;locus_tag=AL42_RS09150;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_003403413.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 766192 766492 . + . ID=gene-AL42_RS27900;Name=AL42_RS27900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS27900;partial=true;pseudo=true;start_range=.,766192 NZ_KK316784.1 Protein Homology CDS 766192 766492 . + 0 ID=cds-AL42_RS27900;Parent=gene-AL42_RS27900;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014585402.1;locus_tag=AL42_RS27900;partial=true;product=amidase family protein;pseudo=true;start_range=.,766192;transl_table=11 NZ_KK316784.1 RefSeq gene 766479 768392 . - . ID=gene-AL42_RS09155;Name=AL42_RS09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09155;old_locus_tag=AL42_00698 NZ_KK316784.1 Protein Homology CDS 766479 768392 . - 0 ID=cds-WP_003900995.1;Parent=gene-AL42_RS09155;Dbxref=GenBank:WP_003900995.1;Name=WP_003900995.1;Ontology_term=GO:0046514,GO:0017040;gbkey=CDS;go_function=N-acylsphingosine amidohydrolase activity|0017040||IEA;go_process=ceramide catabolic process|0046514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215183.1;locus_tag=AL42_RS09155;product=neutral ceramidase;protein_id=WP_003900995.1;transl_table=11 NZ_KK316784.1 RefSeq gene 768587 769345 . + . ID=gene-AL42_RS09160;Name=end;gbkey=Gene;gene=end;gene_biotype=protein_coding;locus_tag=AL42_RS09160;old_locus_tag=AL42_00699 NZ_KK316784.1 Protein Homology CDS 768587 769345 . + 0 ID=cds-WP_003403419.1;Parent=gene-AL42_RS09160;Dbxref=GenBank:WP_003403419.1;Name=WP_003403419.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=end;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215184.1;locus_tag=AL42_RS09160;product=deoxyribonuclease IV;protein_id=WP_003403419.1;transl_table=11 NZ_KK316784.1 RefSeq gene 769377 770219 . + . ID=gene-AL42_RS09165;Name=lpqP;gbkey=Gene;gene=lpqP;gene_biotype=protein_coding;locus_tag=AL42_RS09165;old_locus_tag=AL42_00700 NZ_KK316784.1 Protein Homology CDS 769377 770219 . + 0 ID=cds-WP_003403421.1;Parent=gene-AL42_RS09165;Dbxref=GenBank:WP_003403421.1;Name=WP_003403421.1;Ontology_term=GO:0052689;gbkey=CDS;gene=lpqP;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215185.1;locus_tag=AL42_RS09165;product=CE1 family esterase;protein_id=WP_003403421.1;transl_table=11 NZ_KK316784.1 RefSeq gene 770279 771907 . + . ID=gene-AL42_RS09170;Name=AL42_RS09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09170;old_locus_tag=AL42_00701 NZ_KK316784.1 Protein Homology CDS 770279 771907 . + 0 ID=cds-WP_003403423.1;Parent=gene-AL42_RS09170;Dbxref=GenBank:WP_003403423.1;Name=WP_003403423.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215186.1;locus_tag=AL42_RS09170;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003403423.1;transl_table=11 NZ_KK316784.1 RefSeq gene 771918 772856 . + . ID=gene-AL42_RS09175;Name=AL42_RS09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09175;old_locus_tag=AL42_00702 NZ_KK316784.1 Protein Homology CDS 771918 772856 . + 0 ID=cds-WP_003905366.1;Parent=gene-AL42_RS09175;Dbxref=GenBank:WP_003905366.1;Name=WP_003905366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215187.1;locus_tag=AL42_RS09175;product=crotonase/enoyl-CoA hydratase family protein;protein_id=WP_003905366.1;transl_table=11 NZ_KK316784.1 RefSeq gene 772859 773581 . + . ID=gene-AL42_RS09180;Name=AL42_RS09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09180;old_locus_tag=AL42_00703 NZ_KK316784.1 Protein Homology CDS 772859 773581 . + 0 ID=cds-WP_003403429.1;Parent=gene-AL42_RS09180;Dbxref=GenBank:WP_003403429.1;Name=WP_003403429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215188.1;locus_tag=AL42_RS09180;product=PaaX family transcriptional regulator C-terminal domain-containing protein;protein_id=WP_003403429.1;transl_table=11 NZ_KK316784.1 RefSeq gene 773578 774369 . + . ID=gene-AL42_RS09185;Name=AL42_RS09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09185;old_locus_tag=AL42_00704 NZ_KK316784.1 Protein Homology CDS 773578 774369 . + 0 ID=cds-WP_003403433.1;Parent=gene-AL42_RS09185;Dbxref=GenBank:WP_003403433.1;Name=WP_003403433.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177745.1;locus_tag=AL42_RS09185;product=crotonase/enoyl-CoA hydratase family protein;protein_id=WP_003403433.1;transl_table=11 NZ_KK316784.1 RefSeq gene 774381 777275 . - . ID=gene-AL42_RS09190;Name=mmpL5;gbkey=Gene;gene=mmpL5;gene_biotype=protein_coding;locus_tag=AL42_RS09190;old_locus_tag=AL42_00705 NZ_KK316784.1 Protein Homology CDS 774381 777275 . - 0 ID=cds-WP_003905367.1;Parent=gene-AL42_RS09190;Dbxref=GenBank:WP_003905367.1;Name=WP_003905367.1;gbkey=CDS;gene=mmpL5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215190.1;locus_tag=AL42_RS09190;product=siderophore RND transporter MmpL5;protein_id=WP_003905367.1;transl_table=11 NZ_KK316784.1 RefSeq gene 777272 777700 . - . ID=gene-AL42_RS09195;Name=mmpS5;gbkey=Gene;gene=mmpS5;gene_biotype=protein_coding;locus_tag=AL42_RS09195;old_locus_tag=AL42_00706 NZ_KK316784.1 Protein Homology CDS 777272 777700 . - 0 ID=cds-WP_003403439.1;Parent=gene-AL42_RS09195;Dbxref=GenBank:WP_003403439.1;Name=WP_003403439.1;gbkey=CDS;gene=mmpS5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215191.1;locus_tag=AL42_RS09195;product=siderophore transporter accessory protein MmpS5;protein_id=WP_003403439.1;transl_table=11 NZ_KK316784.1 RefSeq gene 777785 778282 . + . ID=gene-AL42_RS09200;Name=mmpR5;gbkey=Gene;gene=mmpR5;gene_biotype=protein_coding;locus_tag=AL42_RS09200;old_locus_tag=AL42_00707 NZ_KK316784.1 Protein Homology CDS 777785 778282 . + 0 ID=cds-WP_003403442.1;Parent=gene-AL42_RS09200;Dbxref=GenBank:WP_003403442.1;Name=WP_003403442.1;gbkey=CDS;gene=mmpR5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215192.1;locus_tag=AL42_RS09200;product=siderophore transport transcriptional regulator MmpR5;protein_id=WP_003403442.1;transl_table=11 NZ_KK316784.1 RefSeq gene 778338 778835 . - . ID=gene-AL42_RS09205;Name=AL42_RS09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09205;old_locus_tag=AL42_00708 NZ_KK316784.1 Protein Homology CDS 778338 778835 . - 0 ID=cds-WP_003901898.1;Parent=gene-AL42_RS09205;Dbxref=GenBank:WP_003901898.1;Name=WP_003901898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215193.1;locus_tag=AL42_RS09205;product=DUF3060 domain-containing protein;protein_id=WP_003901898.1;transl_table=11 NZ_KK316784.1 RefSeq gene 778837 779211 . - . ID=gene-AL42_RS09210;Name=AL42_RS09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09210;old_locus_tag=AL42_00709 NZ_KK316784.1 Protein Homology CDS 778837 779211 . - 0 ID=cds-WP_003403448.1;Parent=gene-AL42_RS09210;Dbxref=GenBank:WP_003403448.1;Name=WP_003403448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215194.1;locus_tag=AL42_RS09210;product=DUF3060 domain-containing protein;protein_id=WP_003403448.1;transl_table=11 NZ_KK316784.1 RefSeq gene 779516 780106 . + . ID=gene-AL42_RS09215;Name=AL42_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09215;old_locus_tag=AL42_00710 NZ_KK316784.1 Protein Homology CDS 779516 780106 . + 0 ID=cds-WP_003403451.1;Parent=gene-AL42_RS09215;Dbxref=GenBank:WP_003403451.1;Name=WP_003403451.1;Ontology_term=GO:0006355,GO:0045892,GO:0046677,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215195.1;locus_tag=AL42_RS09215;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003403451.1;transl_table=11 NZ_KK316784.1 RefSeq gene 780355 780729 . + . ID=gene-AL42_RS09220;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=AL42_RS09220;old_locus_tag=AL42_00711 NZ_KK316784.1 Protein Homology CDS 780355 780729 . + 0 ID=cds-WP_003403453.1;Parent=gene-AL42_RS09220;Dbxref=GenBank:WP_003403453.1;Name=WP_003403453.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215196.1;locus_tag=AL42_RS09220;product=30S ribosomal protein S12;protein_id=WP_003403453.1;transl_table=11 NZ_KK316784.1 RefSeq gene 780729 781199 . + . ID=gene-AL42_RS09225;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=AL42_RS09225;old_locus_tag=AL42_00712 NZ_KK316784.1 Protein Homology CDS 780729 781199 . + 0 ID=cds-WP_003403456.1;Parent=gene-AL42_RS09225;Dbxref=GenBank:WP_003403456.1;Name=WP_003403456.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012084986.1;locus_tag=AL42_RS09225;product=30S ribosomal protein S7;protein_id=WP_003403456.1;transl_table=11 NZ_KK316784.1 RefSeq gene 781280 783385 . + . ID=gene-AL42_RS09230;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=AL42_RS09230;old_locus_tag=AL42_00713 NZ_KK316784.1 Protein Homology CDS 781280 783385 . + 0 ID=cds-WP_003898554.1;Parent=gene-AL42_RS09230;Dbxref=GenBank:WP_003898554.1;Name=WP_003898554.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177746.1;locus_tag=AL42_RS09230;product=elongation factor G;protein_id=WP_003898554.1;transl_table=11 NZ_KK316784.1 RefSeq gene 783616 784806 . + . ID=gene-AL42_RS09235;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=AL42_RS09235;old_locus_tag=AL42_00714 NZ_KK316784.1 Protein Homology CDS 783616 784806 . + 0 ID=cds-WP_003403463.1;Parent=gene-AL42_RS09235;Dbxref=GenBank:WP_003403463.1;Name=WP_003403463.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005055596.1;locus_tag=AL42_RS09235;product=elongation factor Tu;protein_id=WP_003403463.1;transl_table=11 NZ_KK316784.1 RefSeq gene 784944 785741 . + . ID=gene-AL42_RS09240;Name=AL42_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09240;old_locus_tag=AL42_00715 NZ_KK316784.1 Protein Homology CDS 784944 785741 . + 0 ID=cds-WP_003403465.1;Parent=gene-AL42_RS09240;Dbxref=GenBank:WP_003403465.1;Name=WP_003403465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215200.1;locus_tag=AL42_RS09240;product=SHOCT domain-containing protein;protein_id=WP_003403465.1;transl_table=11 NZ_KK316784.1 RefSeq gene 785894 786721 . + . ID=gene-AL42_RS09245;Name=AL42_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09245;old_locus_tag=AL42_00716 NZ_KK316784.1 Protein Homology CDS 785894 786721 . + 0 ID=cds-WP_003403468.1;Parent=gene-AL42_RS09245;Dbxref=GenBank:WP_003403468.1;Name=WP_003403468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215201.1;locus_tag=AL42_RS09245;product=Rv0687 family mycofactocin-dependent SDR oxidoreductase;protein_id=WP_003403468.1;transl_table=11 NZ_KK316784.1 RefSeq gene 786735 787955 . + . ID=gene-AL42_RS09250;Name=AL42_RS09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09250;old_locus_tag=AL42_00717 NZ_KK316784.1 Protein Homology CDS 786735 787955 . + 0 ID=cds-WP_003901000.1;Parent=gene-AL42_RS09250;Dbxref=GenBank:WP_003901000.1;Name=WP_003901000.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215202.1;locus_tag=AL42_RS09250;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_003901000.1;transl_table=11 NZ_KK316784.1 RefSeq gene 787967 788215 . + . ID=gene-AL42_RS27110;Name=AL42_RS27110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27110 NZ_KK316784.1 GeneMarkS-2+ CDS 787967 788215 . + 0 ID=cds-WP_178121162.1;Parent=gene-AL42_RS27110;Dbxref=GenBank:WP_178121162.1;Name=WP_178121162.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL42_RS27110;product=hypothetical protein;protein_id=WP_178121162.1;transl_table=11 NZ_KK316784.1 RefSeq gene 788819 789868 . - . ID=gene-AL42_RS09260;Name=AL42_RS09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09260;old_locus_tag=AL42_00719 NZ_KK316784.1 Protein Homology CDS 788819 789868 . - 0 ID=cds-WP_003403477.1;Parent=gene-AL42_RS09260;Dbxref=GenBank:WP_003403477.1;Name=WP_003403477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215204.1;locus_tag=AL42_RS09260;product=DUF2332 domain-containing protein;protein_id=WP_003403477.1;transl_table=11 NZ_KK316784.1 RefSeq gene 789865 790461 . - . ID=gene-AL42_RS09265;Name=mftR;gbkey=Gene;gene=mftR;gene_biotype=protein_coding;locus_tag=AL42_RS09265;old_locus_tag=AL42_00720 NZ_KK316784.1 Protein Homology CDS 789865 790461 . - 0 ID=cds-WP_003905369.1;Parent=gene-AL42_RS09265;Dbxref=GenBank:WP_003905369.1;Name=WP_003905369.1;Note=MftR%2C the mycofactocin system transcriptional regulator%2C is an uncharacterized TetR family DNA-binding transcription factor. Its role is inferred by context. It occurs as part of the biosynthesis locus for mycofactocin%2C a partially characterized electron carrier derived from the terminal Val-Tyr dipeptide of the precursor peptide MftA%2C through a radical SAM enzyme-mediated process.;Ontology_term=GO:0006355,GO:0003700,GO:0036042;gbkey=CDS;gene=mftR;go_function=DNA-binding transcription factor activity|0003700||IEA,long-chain fatty acyl-CoA binding|0036042||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215205.1;locus_tag=AL42_RS09265;product=mycofactocin system transcriptional regulator;protein_id=WP_003905369.1;transl_table=11 NZ_KK316784.1 RefSeq gene 790552 790641 . + . ID=gene-AL42_RS26780;Name=mftA;gbkey=Gene;gene=mftA;gene_biotype=protein_coding;locus_tag=AL42_RS26780 NZ_KK316784.1 Protein Homology CDS 790552 790641 . + 0 ID=cds-WP_003403483.1;Parent=gene-AL42_RS26780;Dbxref=GenBank:WP_003403483.1;Name=WP_003403483.1;Note=Mycofactocin is a small molecule electron carrier derived from the final two amino acids%2C Val-Tyr%2C of MftA%2C the mycofactocin precursor. It plays a role in redox homeostasis and the metabolism of alcohols and aldehydes in Actinobacteria%2C including Mycobacterium tuberculosis.;Ontology_term=GO:0140604,GO:0009055;gbkey=CDS;gene=mftA;go_function=electron transfer activity|0009055||IEA;go_process=mycofactocin biosynthetic process|0140604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007409348.2;locus_tag=AL42_RS26780;product=mycofactocin precursor MftA;protein_id=WP_003403483.1;transl_table=11 NZ_KK316784.1 RefSeq gene 790626 790955 . + . ID=gene-AL42_RS09270;Name=mftB;gbkey=Gene;gene=mftB;gene_biotype=protein_coding;locus_tag=AL42_RS09270;old_locus_tag=AL42_00722 NZ_KK316784.1 Protein Homology CDS 790626 790955 . + 0 ID=cds-WP_003403486.1;Parent=gene-AL42_RS09270;Dbxref=GenBank:WP_003403486.1;Name=WP_003403486.1;Note=MftB%2C a small protein%2C is a peptide chaperone that assists the radical SAM enzyme MftC in performing two modifications to the C-terminal Val-Tyr dipeptide of the mycofactocin precursor peptide%2C MftA. MftB's role is analogous to the role of PqqD in the biosynthesis of PQQ%2C a cofactor that derives entirely from a Tyr and a Glu in the precursor PqqA.;Ontology_term=GO:0140604,GO:0042277;gbkey=CDS;gene=mftB;go_function=peptide binding|0042277||IEA;go_process=mycofactocin biosynthetic process|0140604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215206.1;locus_tag=AL42_RS09270;product=mycofactocin biosynthesis chaperone MftB;protein_id=WP_003403486.1;transl_table=11 NZ_KK316784.1 RefSeq gene 790952 792127 . + . ID=gene-AL42_RS09275;Name=mftC;gbkey=Gene;gene=mftC;gene_biotype=protein_coding;locus_tag=AL42_RS09275;old_locus_tag=AL42_00723 NZ_KK316784.1 Protein Homology CDS 790952 792127 . + 0 ID=cds-WP_003403490.1;Parent=gene-AL42_RS09275;Dbxref=GenBank:WP_003403490.1;Name=WP_003403490.1;Note=MftC is a radical SAM/SPASM enzyme that catalyzes the first two steps in biosynthesis of the electron carrier mycofactocin from the terminal Val-Tyr dipeptide of the precursor peptide MftA.;Ontology_term=GO:0031179,GO:0140604,GO:0051539;gbkey=CDS;gene=mftC;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptide modification|0031179||IEA,mycofactocin biosynthetic process|0140604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215207.1;locus_tag=AL42_RS09275;product=mycofactocin radical SAM maturase;protein_id=WP_003403490.1;transl_table=11 NZ_KK316784.1 RefSeq gene 792130 793320 . + . ID=gene-AL42_RS09280;Name=mftD;gbkey=Gene;gene=mftD;gene_biotype=protein_coding;locus_tag=AL42_RS09280;old_locus_tag=AL42_00724 NZ_KK316784.1 Protein Homology CDS 792130 793320 . + 0 ID=cds-WP_003898557.1;Parent=gene-AL42_RS09280;Dbxref=GenBank:WP_003898557.1;Name=WP_003898557.1;Note=MftD%2C an enzyme found in the mycofactocin biosynthesis locus%2C performs an oxidative deamination of 3-amino-5-[(p-hydroxyphenyl)methyl]-4%2C4-dimethyl-2-pyrrolidinone (AHDP). The resulting compound%2C now called pre-mycofactocin (PMFT)%2C is a biologically active redox cofactor that can oxidize the non-exchangeable NADH of TIGR03971 family SDR-type oxidoreductases.;Ontology_term=GO:0140604;gbkey=CDS;gene=mftD;go_process=mycofactocin biosynthetic process|0140604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215208.1;locus_tag=AL42_RS09280;product=pre-mycofactocin synthase MftD;protein_id=WP_003898557.1;transl_table=11 NZ_KK316784.1 RefSeq gene 793510 794265 . + . ID=gene-AL42_RS09285;Name=mftE;gbkey=Gene;gene=mftE;gene_biotype=protein_coding;locus_tag=AL42_RS09285;old_locus_tag=AL42_00725 NZ_KK316784.1 Protein Homology CDS 793510 794265 . + 0 ID=cds-WP_003403497.1;Parent=gene-AL42_RS09285;Dbxref=GenBank:WP_003403497.1;Name=WP_003403497.1;Ontology_term=GO:0140604;gbkey=CDS;gene=mftE;go_process=mycofactocin biosynthetic process|0140604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215209.1;locus_tag=AL42_RS09285;product=mycofactocin biosynthesis peptidyl-dipeptidase MftE;protein_id=WP_003403497.1;transl_table=11 NZ_KK316784.1 RefSeq gene 794314 795726 . + . ID=gene-AL42_RS09290;Name=mftF;gbkey=Gene;gene=mftF;gene_biotype=protein_coding;locus_tag=AL42_RS09290;old_locus_tag=AL42_00726 NZ_KK316784.1 Protein Homology CDS 794314 795726 . + 0 ID=cds-WP_003403501.1;Parent=gene-AL42_RS09290;Dbxref=GenBank:WP_003403501.1;Name=WP_003403501.1;Note=Members of this protein family%2C MftF%2C are glycosyltransferases%2C members of PF00535 (glycosyl transferase family 2). The encoding gene is found as part of the mycofactocin cassette%2C in Mycobacterium tuberculosis%2C many other Actinobacteria%2C and occasional members of other lineages. Mycofactocin itself%2C a putative redox carrier%2C is a heavily modified derivative of the C-terminal Val-Tyr dipeptide of the mycofactocin precursor MftA (TIGR03969).;Ontology_term=GO:0140604,GO:0016740;gbkey=CDS;gene=mftF;go_function=transferase activity|0016740||IEA;go_process=mycofactocin biosynthetic process|0140604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215210.1;locus_tag=AL42_RS09290;product=mycofactocin biosynthesis glycosyltransferase MftF;protein_id=WP_003403501.1;transl_table=11 NZ_KK316784.1 RefSeq gene 795728 797167 . + . ID=gene-AL42_RS09295;Name=mftG;gbkey=Gene;gene=mftG;gene_biotype=protein_coding;locus_tag=AL42_RS09295;old_locus_tag=AL42_00727 NZ_KK316784.1 Protein Homology CDS 795728 797167 . + 0 ID=cds-WP_003901900.1;Parent=gene-AL42_RS09295;Dbxref=GenBank:WP_003901900.1;Name=WP_003901900.1;Ontology_term=GO:0016614;gbkey=CDS;gene=mftG;go_function=oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215211.1;locus_tag=AL42_RS09295;product=mycofactocin dehydrogenase MftG;protein_id=WP_003901900.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 797443 797589 . + . ID=gene-AL42_RS25530;Name=AL42_RS25530;end_range=797589,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS25530;partial=true;pseudo=true;start_range=.,797443 NZ_KK316784.1 Protein Homology CDS 797443 797589 . + 0 ID=cds-AL42_RS25530;Parent=gene-AL42_RS25530;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=797589,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032491516.1;locus_tag=AL42_RS25530;partial=true;product=transposase;pseudo=true;start_range=.,797443;transl_table=11 NZ_KK316784.1 RefSeq gene 798424 798645 . + . ID=gene-AL42_RS25540;Name=AL42_RS25540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS25540;old_locus_tag=AL42_00729 NZ_KK316784.1 Protein Homology CDS 798424 798645 . + 0 ID=cds-WP_003910987.1;Parent=gene-AL42_RS25540;Dbxref=GenBank:WP_003910987.1;Name=WP_003910987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215213.1;locus_tag=AL42_RS25540;product=hypothetical protein;protein_id=WP_003910987.1;transl_table=11 NZ_KK316784.1 RefSeq gene 798899 799129 . - . ID=gene-AL42_RS27475;Name=AL42_RS27475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27475 NZ_KK316784.1 Protein Homology CDS 798899 799129 . - 0 ID=cds-WP_003403573.1;Parent=gene-AL42_RS27475;Dbxref=GenBank:WP_003403573.1;Name=WP_003403573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003403573.1;locus_tag=AL42_RS27475;product=hypothetical protein;protein_id=WP_003403573.1;transl_table=11 NZ_KK316784.1 RefSeq gene 799282 799587 . + . ID=gene-AL42_RS09310;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=AL42_RS09310;old_locus_tag=AL42_00730 NZ_KK316784.1 Protein Homology CDS 799282 799587 . + 0 ID=cds-WP_003403578.1;Parent=gene-AL42_RS09310;Dbxref=GenBank:WP_003403578.1;Name=WP_003403578.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009948626.1;locus_tag=AL42_RS09310;product=30S ribosomal protein S10;protein_id=WP_003403578.1;transl_table=11 NZ_KK316784.1 RefSeq gene 799604 800257 . + . ID=gene-AL42_RS09315;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=AL42_RS09315;old_locus_tag=AL42_00731 NZ_KK316784.1 Protein Homology CDS 799604 800257 . + 0 ID=cds-WP_003403579.1;Parent=gene-AL42_RS09315;Dbxref=GenBank:WP_003403579.1;Name=WP_003403579.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215215.1;locus_tag=AL42_RS09315;product=50S ribosomal protein L3;protein_id=WP_003403579.1;transl_table=11 NZ_KK316784.1 RefSeq gene 800257 800928 . + . ID=gene-AL42_RS09320;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=AL42_RS09320;old_locus_tag=AL42_00732 NZ_KK316784.1 Protein Homology CDS 800257 800928 . + 0 ID=cds-WP_003403580.1;Parent=gene-AL42_RS09320;Dbxref=GenBank:WP_003403580.1;Name=WP_003403580.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215216.1;locus_tag=AL42_RS09320;product=50S ribosomal protein L4;protein_id=WP_003403580.1;transl_table=11 NZ_KK316784.1 RefSeq gene 800928 801230 . + . ID=gene-AL42_RS09325;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=AL42_RS09325;old_locus_tag=AL42_00733 NZ_KK316784.1 Protein Homology CDS 800928 801230 . + 0 ID=cds-WP_003403581.1;Parent=gene-AL42_RS09325;Dbxref=GenBank:WP_003403581.1;Name=WP_003403581.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplW;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215217.1;locus_tag=AL42_RS09325;product=50S ribosomal protein L23;protein_id=WP_003403581.1;transl_table=11 NZ_KK316784.1 RefSeq gene 801485 802327 . + . ID=gene-AL42_RS09335;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=AL42_RS09335;old_locus_tag=AL42_00734 NZ_KK316784.1 Protein Homology CDS 801485 802327 . + 0 ID=cds-WP_003403582.1;Parent=gene-AL42_RS09335;Dbxref=GenBank:WP_003403582.1;Name=WP_003403582.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215218.1;locus_tag=AL42_RS09335;product=50S ribosomal protein L2;protein_id=WP_003403582.1;transl_table=11 NZ_KK316784.1 RefSeq gene 802368 802649 . + . ID=gene-AL42_RS09340;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=AL42_RS09340;old_locus_tag=AL42_00735 NZ_KK316784.1 Protein Homology CDS 802368 802649 . + 0 ID=cds-WP_003403584.1;Parent=gene-AL42_RS09340;Dbxref=GenBank:WP_003403584.1;Name=WP_003403584.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215219.1;locus_tag=AL42_RS09340;product=30S ribosomal protein S19;protein_id=WP_003403584.1;transl_table=11 NZ_KK316784.1 RefSeq gene 802646 803239 . + . ID=gene-AL42_RS09345;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=AL42_RS09345;old_locus_tag=AL42_00736 NZ_KK316784.1 Protein Homology CDS 802646 803239 . + 0 ID=cds-WP_003403587.1;Parent=gene-AL42_RS09345;Dbxref=GenBank:WP_003403587.1;Name=WP_003403587.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215220.1;locus_tag=AL42_RS09345;product=50S ribosomal protein L22;protein_id=WP_003403587.1;transl_table=11 NZ_KK316784.1 RefSeq gene 803239 804063 . + . ID=gene-AL42_RS09350;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=AL42_RS09350;old_locus_tag=AL42_00737 NZ_KK316784.1 Protein Homology CDS 803239 804063 . + 0 ID=cds-WP_003403590.1;Parent=gene-AL42_RS09350;Dbxref=GenBank:WP_003403590.1;Name=WP_003403590.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215221.1;locus_tag=AL42_RS09350;product=30S ribosomal protein S3;protein_id=WP_003403590.1;transl_table=11 NZ_KK316784.1 RefSeq gene 804067 804483 . + . ID=gene-AL42_RS09355;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=AL42_RS09355;old_locus_tag=AL42_00738 NZ_KK316784.1 Protein Homology CDS 804067 804483 . + 0 ID=cds-WP_003403592.1;Parent=gene-AL42_RS09355;Dbxref=GenBank:WP_003403592.1;Name=WP_003403592.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215222.1;locus_tag=AL42_RS09355;product=50S ribosomal protein L16;protein_id=WP_003403592.1;transl_table=11 NZ_KK316784.1 RefSeq gene 804483 804716 . + . ID=gene-AL42_RS09360;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=AL42_RS09360;old_locus_tag=AL42_00739 NZ_KK316784.1 Protein Homology CDS 804483 804716 . + 0 ID=cds-WP_003403594.1;Parent=gene-AL42_RS09360;Dbxref=GenBank:WP_003403594.1;Name=WP_003403594.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215223.1;locus_tag=AL42_RS09360;product=50S ribosomal protein L29;protein_id=WP_003403594.1;transl_table=11 NZ_KK316784.1 RefSeq gene 804713 805123 . + . ID=gene-AL42_RS09365;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=AL42_RS09365;old_locus_tag=AL42_00740 NZ_KK316784.1 Protein Homology CDS 804713 805123 . + 0 ID=cds-WP_003403596.1;Parent=gene-AL42_RS09365;Dbxref=GenBank:WP_003403596.1;Name=WP_003403596.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215224.1;locus_tag=AL42_RS09365;product=30S ribosomal protein S17;protein_id=WP_003403596.1;transl_table=11 NZ_KK316784.1 RefSeq gene 805292 807655 . + . ID=gene-AL42_RS09370;Name=atsA;gbkey=Gene;gene=atsA;gene_biotype=protein_coding;locus_tag=AL42_RS09370;old_locus_tag=AL42_00741 NZ_KK316784.1 Protein Homology CDS 805292 807655 . + 0 ID=cds-WP_003898561.1;Parent=gene-AL42_RS09370;Dbxref=GenBank:WP_003898561.1;Name=WP_003898561.1;gbkey=CDS;gene=atsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215225.1;locus_tag=AL42_RS09370;product=arylsulfatase AtsA;protein_id=WP_003898561.1;transl_table=11 NZ_KK316784.1 RefSeq gene 807703 808602 . + . ID=gene-AL42_RS09375;Name=AL42_RS09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09375;old_locus_tag=AL42_00742 NZ_KK316784.1 Protein Homology CDS 807703 808602 . + 0 ID=cds-WP_003403610.1;Parent=gene-AL42_RS09375;Dbxref=GenBank:WP_003403610.1;Name=WP_003403610.1;Ontology_term=GO:0016670,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity%2C acting on a sulfur group of donors%2C oxygen as acceptor|0016670||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215226.1;locus_tag=AL42_RS09375;product=formylglycine-generating enzyme family protein;protein_id=WP_003403610.1;transl_table=11 NZ_KK316784.1 RefSeq gene 808904 809845 . + . ID=gene-AL42_RS09380;Name=AL42_RS09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09380;old_locus_tag=AL42_00743 NZ_KK316784.1 Protein Homology CDS 808904 809845 . + 0 ID=cds-WP_003898562.1;Parent=gene-AL42_RS09380;Dbxref=GenBank:WP_003898562.1;Name=WP_003898562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215227.1;locus_tag=AL42_RS09380;product=DUF4436 domain-containing protein;protein_id=WP_003898562.1;transl_table=11 NZ_KK316784.1 RefSeq gene 810331 810699 . + . ID=gene-AL42_RS09385;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=AL42_RS09385;old_locus_tag=AL42_00744 NZ_KK316784.1 Protein Homology CDS 810331 810699 . + 0 ID=cds-WP_003403649.1;Parent=gene-AL42_RS09385;Dbxref=GenBank:WP_003403649.1;Name=WP_003403649.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007073026.1;locus_tag=AL42_RS09385;product=50S ribosomal protein L14;protein_id=WP_003403649.1;transl_table=11 NZ_KK316784.1 RefSeq gene 810700 811017 . + . ID=gene-AL42_RS09390;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=AL42_RS09390;old_locus_tag=AL42_00745 NZ_KK316784.1 Protein Homology CDS 810700 811017 . + 0 ID=cds-WP_003403654.1;Parent=gene-AL42_RS09390;Dbxref=GenBank:WP_003403654.1;Name=WP_003403654.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215229.1;locus_tag=AL42_RS09390;product=50S ribosomal protein L24;protein_id=WP_003403654.1;transl_table=11 NZ_KK316784.1 RefSeq gene 811017 811580 . + . ID=gene-AL42_RS09395;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=AL42_RS09395;old_locus_tag=AL42_00746 NZ_KK316784.1 Protein Homology CDS 811017 811580 . + 0 ID=cds-WP_003403660.1;Parent=gene-AL42_RS09395;Dbxref=GenBank:WP_003403660.1;Name=WP_003403660.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215230.1;locus_tag=AL42_RS09395;product=50S ribosomal protein L5;protein_id=WP_003403660.1;transl_table=11 NZ_KK316784.1 RefSeq gene 811585 811770 . + . ID=gene-AL42_RS09400;Name=AL42_RS09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09400;old_locus_tag=AL42_00747 NZ_KK316784.1 Protein Homology CDS 811585 811770 . + 0 ID=cds-WP_003403667.1;Parent=gene-AL42_RS09400;Dbxref=GenBank:WP_003403667.1;Name=WP_003403667.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003948630.1;locus_tag=AL42_RS09400;product=type Z 30S ribosomal protein S14;protein_id=WP_003403667.1;transl_table=11 NZ_KK316784.1 RefSeq gene 811934 812332 . + . ID=gene-AL42_RS09405;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=AL42_RS09405;old_locus_tag=AL42_00748 NZ_KK316784.1 Protein Homology CDS 811934 812332 . + 0 ID=cds-WP_003403669.1;Parent=gene-AL42_RS09405;Dbxref=GenBank:WP_003403669.1;Name=WP_003403669.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010908572.1;locus_tag=AL42_RS09405;product=30S ribosomal protein S8;protein_id=WP_003403669.1;transl_table=11 NZ_KK316784.1 RefSeq gene 812356 812895 . + . ID=gene-AL42_RS09410;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=AL42_RS09410;old_locus_tag=AL42_00749 NZ_KK316784.1 Protein Homology CDS 812356 812895 . + 0 ID=cds-WP_003403673.1;Parent=gene-AL42_RS09410;Dbxref=GenBank:WP_003403673.1;Name=WP_003403673.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010908571.1;locus_tag=AL42_RS09410;product=50S ribosomal protein L6;protein_id=WP_003403673.1;transl_table=11 NZ_KK316784.1 RefSeq gene 812898 813266 . + . ID=gene-AL42_RS09415;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=AL42_RS09415;old_locus_tag=AL42_00750 NZ_KK316784.1 Protein Homology CDS 812898 813266 . + 0 ID=cds-WP_003403677.1;Parent=gene-AL42_RS09415;Dbxref=GenBank:WP_003403677.1;Name=WP_003403677.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215234.1;locus_tag=AL42_RS09415;product=50S ribosomal protein L18;protein_id=WP_003403677.1;transl_table=11 NZ_KK316784.1 RefSeq gene 813286 813948 . + . ID=gene-AL42_RS09420;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=AL42_RS09420;old_locus_tag=AL42_00751 NZ_KK316784.1 Protein Homology CDS 813286 813948 . + 0 ID=cds-WP_003403680.1;Parent=gene-AL42_RS09420;Dbxref=GenBank:WP_003403680.1;Name=WP_003403680.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215235.1;locus_tag=AL42_RS09420;product=30S ribosomal protein S5;protein_id=WP_003403680.1;transl_table=11 NZ_KK316784.1 RefSeq gene 813951 814148 . + . ID=gene-AL42_RS09425;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=AL42_RS09425;old_locus_tag=AL42_00752 NZ_KK316784.1 Protein Homology CDS 813951 814148 . + 0 ID=cds-WP_003403683.1;Parent=gene-AL42_RS09425;Dbxref=GenBank:WP_003403683.1;Name=WP_003403683.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215236.1;locus_tag=AL42_RS09425;product=50S ribosomal protein L30;protein_id=WP_003403683.1;transl_table=11 NZ_KK316784.1 RefSeq gene 814148 814588 . + . ID=gene-AL42_RS09430;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=AL42_RS09430;old_locus_tag=AL42_00753 NZ_KK316784.1 Protein Homology CDS 814148 814588 . + 0 ID=cds-WP_003898563.1;Parent=gene-AL42_RS09430;Dbxref=GenBank:WP_003898563.1;Name=WP_003898563.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215237.1;locus_tag=AL42_RS09430;product=50S ribosomal protein L15;protein_id=WP_003898563.1;transl_table=11 NZ_KK316784.1 RefSeq gene 814690 816492 . + . ID=gene-AL42_RS09435;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=AL42_RS09435;old_locus_tag=AL42_00754 NZ_KK316784.1 Protein Homology CDS 814690 816492 . + 0 ID=cds-WP_003403686.1;Parent=gene-AL42_RS09435;Dbxref=GenBank:WP_003403686.1;Name=WP_003403686.1;Ontology_term=GO:0006465,GO:0006508,GO:0008233,GO:0016020;gbkey=CDS;gene=sppA;go_component=membrane|0016020||IEA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003879455.1;locus_tag=AL42_RS09435;product=signal peptide peptidase SppA;protein_id=WP_003403686.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 816489 817402 . - . ID=gene-AL42_RS09440;Name=AL42_RS09440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS09440;old_locus_tag=AL42_00756;pseudo=true NZ_KK316784.1 Protein Homology CDS 816489 817402 . - 0 ID=cds-AL42_RS09440;Parent=gene-AL42_RS09440;Note=frameshifted;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020727409.1;locus_tag=AL42_RS09440;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 817495 818598 . - . ID=gene-AL42_RS09445;Name=AL42_RS09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09445;old_locus_tag=AL42_00757 NZ_KK316784.1 Protein Homology CDS 817495 818598 . - 0 ID=cds-WP_003403691.1;Parent=gene-AL42_RS09445;Dbxref=GenBank:WP_003403691.1;Name=WP_003403691.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215240.1;locus_tag=AL42_RS09445;product=class I SAM-dependent methyltransferase;protein_id=WP_003403691.1;transl_table=11 NZ_KK316784.1 RefSeq gene 818801 819457 . - . ID=gene-AL42_RS09450;Name=fucA;gbkey=Gene;gene=fucA;gene_biotype=protein_coding;locus_tag=AL42_RS09450;old_locus_tag=AL42_00758 NZ_KK316784.1 Protein Homology CDS 818801 819457 . - 0 ID=cds-WP_003403695.1;Parent=gene-AL42_RS09450;Dbxref=GenBank:WP_003403695.1;Name=WP_003403695.1;gbkey=CDS;gene=fucA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215241.1;locus_tag=AL42_RS09450;product=L-fuculose-phosphate aldolase;protein_id=WP_003403695.1;transl_table=11 NZ_KK316784.1 RefSeq gene 819454 820434 . - . ID=gene-AL42_RS09455;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=AL42_RS09455;old_locus_tag=AL42_00759 NZ_KK316784.1 Protein Homology CDS 819454 820434 . - 0 ID=cds-WP_003403698.1;Parent=gene-AL42_RS09455;Dbxref=GenBank:WP_003403698.1;Name=WP_003403698.1;gbkey=CDS;gene=serA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215242.1;locus_tag=AL42_RS09455;product=D-3-phosphoglycerate dehydrogenase SerA;protein_id=WP_003403698.1;transl_table=11 NZ_KK316784.1 RefSeq gene 820465 821811 . + . ID=gene-AL42_RS09460;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=AL42_RS09460;old_locus_tag=AL42_00760 NZ_KK316784.1 Protein Homology CDS 820465 821811 . + 0 ID=cds-WP_003900204.1;Parent=gene-AL42_RS09460;Dbxref=GenBank:WP_003900204.1;Name=WP_003900204.1;gbkey=CDS;gene=xylB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215243.1;locus_tag=AL42_RS09460;product=D-xylulose kinase;protein_id=WP_003900204.1;transl_table=11 NZ_KK316784.1 RefSeq gene 821866 822552 . + . ID=gene-AL42_RS09465;Name=AL42_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09465;old_locus_tag=AL42_00761 NZ_KK316784.1 Protein Homology CDS 821866 822552 . + 0 ID=cds-WP_009935961.1;Parent=gene-AL42_RS09465;Dbxref=GenBank:WP_009935961.1;Name=WP_009935961.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009935961.1;locus_tag=AL42_RS09465;product=GNAT family N-acetyltransferase;protein_id=WP_009935961.1;transl_table=11 NZ_KK316784.1 RefSeq gene 822641 823597 . - . ID=gene-AL42_RS09470;Name=AL42_RS09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09470;old_locus_tag=AL42_00762 NZ_KK316784.1 Protein Homology CDS 822641 823597 . - 0 ID=cds-WP_003403717.1;Parent=gene-AL42_RS09470;Dbxref=GenBank:WP_003403717.1;Name=WP_003403717.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215245.1;locus_tag=AL42_RS09470;product=class I SAM-dependent methyltransferase;protein_id=WP_003403717.1;transl_table=11 NZ_KK316784.1 RefSeq gene 823758 825083 . + . ID=gene-AL42_RS09475;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=AL42_RS09475;old_locus_tag=AL42_00763 NZ_KK316784.1 Protein Homology CDS 823758 825083 . + 0 ID=cds-WP_003403723.1;Parent=gene-AL42_RS09475;Dbxref=GenBank:WP_003403723.1;Name=WP_003403723.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215246.1;locus_tag=AL42_RS09475;product=preprotein translocase subunit SecY;protein_id=WP_003403723.1;transl_table=11 NZ_KK316784.1 RefSeq gene 825080 825625 . + . ID=gene-AL42_RS09480;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=AL42_RS09480;old_locus_tag=AL42_00764 NZ_KK316784.1 Protein Homology CDS 825080 825625 . + 0 ID=cds-WP_003403726.1;Parent=gene-AL42_RS09480;Dbxref=GenBank:WP_003403726.1;Name=WP_003403726.1;Ontology_term=GO:0006139,GO:0005524,GO:0019205;gbkey=CDS;gene=adk;go_function=ATP binding|0005524||IEA,nucleobase-containing compound kinase activity|0019205||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215247.1;locus_tag=AL42_RS09480;product=adenylate kinase;protein_id=WP_003403726.1;transl_table=11 NZ_KK316784.1 RefSeq gene 825628 826428 . + . ID=gene-AL42_RS09485;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=AL42_RS09485;old_locus_tag=AL42_00765 NZ_KK316784.1 Protein Homology CDS 825628 826428 . + 0 ID=cds-WP_003403728.1;Parent=gene-AL42_RS09485;Dbxref=GenBank:WP_003403728.1;Name=WP_003403728.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177748.1;locus_tag=AL42_RS09485;product=type I methionyl aminopeptidase;protein_id=WP_003403728.1;transl_table=11 NZ_KK316784.1 RefSeq gene 826501 827034 . + . ID=gene-AL42_RS09490;Name=sigL;gbkey=Gene;gene=sigL;gene_biotype=protein_coding;locus_tag=AL42_RS09490;old_locus_tag=AL42_00766 NZ_KK316784.1 Protein Homology CDS 826501 827034 . + 0 ID=cds-WP_003403731.1;Parent=gene-AL42_RS09490;Dbxref=GenBank:WP_003403731.1;Name=WP_003403731.1;gbkey=CDS;gene=sigL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215249.1;locus_tag=AL42_RS09490;product=sigma-70 family RNA polymerase sigma factor SigL;protein_id=WP_003403731.1;transl_table=11 NZ_KK316784.1 RefSeq gene 827098 827850 . + . ID=gene-AL42_RS09495;Name=rslA;gbkey=Gene;gene=rslA;gene_biotype=protein_coding;locus_tag=AL42_RS09495;old_locus_tag=AL42_00767 NZ_KK316784.1 Protein Homology CDS 827098 827850 . + 0 ID=cds-WP_003403733.1;Parent=gene-AL42_RS09495;Dbxref=GenBank:WP_003403733.1;Name=WP_003403733.1;gbkey=CDS;gene=rslA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215250.1;locus_tag=AL42_RS09495;product=anti-sigma-L factor RslA;protein_id=WP_003403733.1;transl_table=11 NZ_KK316784.1 RefSeq gene 827905 828117 . + . ID=gene-AL42_RS25545;Name=AL42_RS25545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS25545 NZ_KK316784.1 Protein Homology CDS 827905 828117 . + 0 ID=cds-WP_003898567.1;Parent=gene-AL42_RS25545;Dbxref=GenBank:WP_003898567.1;Name=WP_003898567.1;Ontology_term=GO:0030976;gbkey=CDS;go_function=thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898567.1;locus_tag=AL42_RS25545;product=thiamine pyrophosphate-binding protein;protein_id=WP_003898567.1;transl_table=11 NZ_KK316784.1 RefSeq gene 828165 828662 . + . ID=gene-AL42_RS09500;Name=AL42_RS09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09500;old_locus_tag=AL42_00768 NZ_KK316784.1 Protein Homology CDS 828165 828662 . + 0 ID=cds-WP_003403738.1;Parent=gene-AL42_RS09500;Dbxref=GenBank:WP_003403738.1;Name=WP_003403738.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215251.1;locus_tag=AL42_RS09500;product=MarR family transcriptional regulator;protein_id=WP_003403738.1;transl_table=11 NZ_KK316784.1 RefSeq gene 828659 828871 . + . ID=gene-AL42_RS25550;Name=AL42_RS25550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS25550 NZ_KK316784.1 Protein Homology CDS 828659 828871 . + 0 ID=cds-WP_003906436.1;Parent=gene-AL42_RS25550;Dbxref=GenBank:WP_003906436.1;Name=WP_003906436.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013127.6;locus_tag=AL42_RS25550;product=PE domain-containing protein;protein_id=WP_003906436.1;transl_table=11 NZ_KK316784.1 RefSeq gene 829020 829568 . + . ID=gene-AL42_RS09505;Name=AL42_RS09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09505;old_locus_tag=AL42_00769 NZ_KK316784.1 Protein Homology CDS 829020 829568 . + 0 ID=cds-WP_003403741.1;Parent=gene-AL42_RS09505;Dbxref=GenBank:WP_003403741.1;Name=WP_003403741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215252.1;locus_tag=AL42_RS09505;product=TIGR03086 family metal-binding protein;protein_id=WP_003403741.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 829588 829731 . - . ID=gene-AL42_RS25555;Name=AL42_RS25555;end_range=829731,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS25555;partial=true;pseudo=true;start_range=.,829588 NZ_KK316784.1 Protein Homology CDS 829588 829731 . - 0 ID=cds-AL42_RS25555;Parent=gene-AL42_RS25555;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=829731,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003403844.1;locus_tag=AL42_RS25555;partial=true;product=3-hydroxyisobutyrate dehydrogenase;pseudo=true;start_range=.,829588;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 829813 830621 . + . ID=gene-AL42_RS09510;Name=AL42_RS09510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS09510;old_locus_tag=AL42_00770;pseudo=true NZ_KK316784.1 Protein Homology CDS 829813 830621 . + 0 ID=cds-AL42_RS09510;Parent=gene-AL42_RS09510;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215253.1;locus_tag=AL42_RS09510;product=DUF4226 domain-containing protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 830736 831263 . + . ID=gene-AL42_RS09515;Name=AL42_RS09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09515;old_locus_tag=AL42_00771 NZ_KK316784.1 Protein Homology CDS 830736 831263 . + 0 ID=cds-WP_003901008.1;Parent=gene-AL42_RS09515;Dbxref=GenBank:WP_003901008.1;Name=WP_003901008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215254.1;locus_tag=AL42_RS09515;product=DUF7956 family protein;protein_id=WP_003901008.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 831485 831808 . + . ID=gene-AL42_RS09520;Name=AL42_RS09520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS09520;old_locus_tag=AL42_00772;partial=true;pseudo=true;start_range=.,831485 NZ_KK316784.1 Protein Homology CDS 831485 831808 . + 0 ID=cds-AL42_RS09520;Parent=gene-AL42_RS09520;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215829.1;locus_tag=AL42_RS09520;partial=true;product=transposase;pseudo=true;start_range=.,831485;transl_table=11 NZ_KK316784.1 RefSeq gene 831941 832468 . + . ID=gene-AL42_RS09525;Name=AL42_RS09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09525;old_locus_tag=AL42_00773 NZ_KK316784.1 Protein Homology CDS 831941 832468 . + 0 ID=cds-WP_003901009.1;Parent=gene-AL42_RS09525;Dbxref=GenBank:WP_003901009.1;Name=WP_003901009.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177749.1;locus_tag=AL42_RS09525;product=PE family protein;protein_id=WP_003901009.1;transl_table=11 NZ_KK316784.1 RefSeq gene 832846 833403 . - . ID=gene-AL42_RS09530;Name=AL42_RS09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09530;old_locus_tag=AL42_00774 NZ_KK316784.1 Protein Homology CDS 832846 833403 . - 0 ID=cds-WP_003403820.1;Parent=gene-AL42_RS09530;Dbxref=GenBank:WP_003403820.1;Name=WP_003403820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215257.1;locus_tag=AL42_RS09530;product=DUF6036 family nucleotidyltransferase;protein_id=WP_003403820.1;transl_table=11 NZ_KK316784.1 RefSeq gene 833400 833906 . - . ID=gene-AL42_RS09535;Name=AL42_RS09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09535;old_locus_tag=AL42_00775 NZ_KK316784.1 Protein Homology CDS 833400 833906 . - 0 ID=cds-WP_003403827.1;Parent=gene-AL42_RS09535;Dbxref=GenBank:WP_003403827.1;Name=WP_003403827.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215258.1;locus_tag=AL42_RS09535;product=helix-turn-helix domain-containing protein;protein_id=WP_003403827.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 834019 834162 . - . ID=gene-AL42_RS09540;Name=AL42_RS09540;end_range=834162,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS09540;old_locus_tag=AL42_00776;partial=true;pseudo=true NZ_KK316784.1 Protein Homology CDS 834019 834162 . - 0 ID=cds-AL42_RS09540;Parent=gene-AL42_RS09540;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=834162,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012392970.1;locus_tag=AL42_RS09540;partial=true;product=3-hydroxyisobutyryl-CoA hydrolase;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 834174 834433 . + . ID=gene-AL42_RS27115;Name=AL42_RS27115;end_range=834433,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS27115;partial=true;pseudo=true;start_range=.,834174 NZ_KK316784.1 Protein Homology CDS 834174 834433 . + 0 ID=cds-AL42_RS27115;Parent=gene-AL42_RS27115;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=834433,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010924697.1;locus_tag=AL42_RS27115;partial=true;product=Zn-binding domain-containing protein;pseudo=true;start_range=.,834174;transl_table=11 NZ_KK316784.1 RefSeq gene 834661 837015 . + . ID=gene-AL42_RS09550;Name=AL42_RS09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09550;old_locus_tag=AL42_00778 NZ_KK316784.1 Protein Homology CDS 834661 837015 . + 0 ID=cds-WP_009940490.1;Parent=gene-AL42_RS09550;Dbxref=GenBank:WP_009940490.1;Name=WP_009940490.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009940490.1;locus_tag=AL42_RS09550;product=PE family protein;protein_id=WP_009940490.1;transl_table=11 NZ_KK316784.1 RefSeq gene 837414 839687 . + . ID=gene-AL42_RS09555;Name=AL42_RS09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09555;old_locus_tag=AL42_00779 NZ_KK316784.1 Protein Homology CDS 837414 839687 . + 0 ID=cds-WP_016330384.1;Parent=gene-AL42_RS09555;Dbxref=GenBank:WP_016330384.1;Name=WP_016330384.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177751.1;locus_tag=AL42_RS09555;product=PE family protein;protein_id=WP_016330384.1;transl_table=11 NZ_KK316784.1 RefSeq gene 839778 840035 . + . ID=gene-AL42_RS09560;Name=AL42_RS09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09560;old_locus_tag=AL42_00780 NZ_KK316784.1 Protein Homology CDS 839778 840035 . + 0 ID=cds-WP_003403834.1;Parent=gene-AL42_RS09560;Dbxref=GenBank:WP_003403834.1;Name=WP_003403834.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215262.1;locus_tag=AL42_RS09560;product=ribbon-helix-helix protein%2C CopG family;protein_id=WP_003403834.1;transl_table=11 NZ_KK316784.1 RefSeq gene 840059 840487 . + . ID=gene-AL42_RS09565;Name=AL42_RS09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09565;old_locus_tag=AL42_00781 NZ_KK316784.1 Protein Homology CDS 840059 840487 . + 0 ID=cds-WP_003403837.1;Parent=gene-AL42_RS09565;Dbxref=GenBank:WP_003403837.1;Name=WP_003403837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215263.1;locus_tag=AL42_RS09565;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003403837.1;transl_table=11 NZ_KK316784.1 RefSeq gene 840568 840705 . - . ID=gene-AL42_RS09570;Name=AL42_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09570;old_locus_tag=AL42_00782 NZ_KK316784.1 GeneMarkS-2+ CDS 840568 840705 . - 0 ID=cds-WP_003403839.1;Parent=gene-AL42_RS09570;Dbxref=GenBank:WP_003403839.1;Name=WP_003403839.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL42_RS09570;product=hypothetical protein;protein_id=WP_003403839.1;transl_table=11 NZ_KK316784.1 RefSeq gene 840864 841109 . + . ID=gene-AL42_RS09575;Name=AL42_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09575;old_locus_tag=AL42_00783 NZ_KK316784.1 Protein Homology CDS 840864 841109 . + 0 ID=cds-WP_003403841.1;Parent=gene-AL42_RS09575;Dbxref=GenBank:WP_003403841.1;Name=WP_003403841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215264.1;locus_tag=AL42_RS09575;product=DUF7956 family protein;protein_id=WP_003403841.1;transl_table=11 NZ_KK316784.1 RefSeq gene 841178 842062 . - . ID=gene-AL42_RS09580;Name=mmsB;gbkey=Gene;gene=mmsB;gene_biotype=protein_coding;locus_tag=AL42_RS09580;old_locus_tag=AL42_00784 NZ_KK316784.1 Protein Homology CDS 841178 842062 . - 0 ID=cds-WP_003403844.1;Parent=gene-AL42_RS09580;Dbxref=GenBank:WP_003403844.1;Name=WP_003403844.1;Ontology_term=GO:0006574,GO:0008442,GO:0051287;gbkey=CDS;gene=mmsB;go_function=3-hydroxyisobutyrate dehydrogenase activity|0008442||IEA,NAD binding|0051287||IEA;go_process=L-valine catabolic process|0006574||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215265.1;locus_tag=AL42_RS09580;product=3-hydroxyisobutyrate dehydrogenase;protein_id=WP_003403844.1;transl_table=11 NZ_KK316784.1 RefSeq gene 842073 843245 . - . ID=gene-AL42_RS09585;Name=AL42_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09585;old_locus_tag=AL42_00785 NZ_KK316784.1 Protein Homology CDS 842073 843245 . - 0 ID=cds-WP_003403845.1;Parent=gene-AL42_RS09585;Dbxref=GenBank:WP_003403845.1;Name=WP_003403845.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215266.1;locus_tag=AL42_RS09585;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003403845.1;transl_table=11 NZ_KK316784.1 RefSeq gene 843252 844784 . - . ID=gene-AL42_RS09590;Name=mmsA;gbkey=Gene;gene=mmsA;gene_biotype=protein_coding;locus_tag=AL42_RS09590;old_locus_tag=AL42_00786 NZ_KK316784.1 Protein Homology CDS 843252 844784 . - 0 ID=cds-WP_003403847.1;Parent=gene-AL42_RS09590;Dbxref=GenBank:WP_003403847.1;Name=WP_003403847.1;gbkey=CDS;gene=mmsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215267.1;locus_tag=AL42_RS09590;product=CoA-acylating methylmalonate-semialdehyde dehydrogenase;protein_id=WP_003403847.1;transl_table=11 NZ_KK316784.1 RefSeq gene 844990 846744 . + . ID=gene-AL42_RS09595;Name=AL42_RS09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09595;old_locus_tag=AL42_00787 NZ_KK316784.1 Protein Homology CDS 844990 846744 . + 0 ID=cds-WP_003403850.1;Parent=gene-AL42_RS09595;Dbxref=GenBank:WP_003403850.1;Name=WP_003403850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177752.1;locus_tag=AL42_RS09595;product=phosphoglycerate mutase PE_PGRS11;protein_id=WP_003403850.1;transl_table=11 NZ_KK316784.1 RefSeq gene 846934 848871 . - . ID=gene-AL42_RS09600;Name=AL42_RS09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09600;old_locus_tag=AL42_00788 NZ_KK316784.1 Protein Homology CDS 846934 848871 . - 0 ID=cds-WP_003898574.1;Parent=gene-AL42_RS09600;Dbxref=GenBank:WP_003898574.1;Name=WP_003898574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177753.1;locus_tag=AL42_RS09600;product=PPE family protein;protein_id=WP_003898574.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 849200 849358 . - . ID=gene-AL42_RS09605;Name=AL42_RS09605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS09605;old_locus_tag=AL42_00789;partial=true;pseudo=true;start_range=.,849200 NZ_KK316784.1 Protein Homology CDS 849200 849358 . - 0 ID=cds-AL42_RS09605;Parent=gene-AL42_RS09605;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010948855.1;locus_tag=AL42_RS09605;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,849200;transl_table=11 NZ_KK316784.1 RefSeq gene 849473 849544 . - . ID=gene-AL42_RS09610;Name=AL42_RS09610;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL42_RS09610;old_locus_tag=AL42_00790 NZ_KK316784.1 tRNAscan-SE tRNA 849473 849544 . - . ID=rna-AL42_RS09610;Parent=gene-AL42_RS09610;anticodon=(pos:complement(849510..849512));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS09610;product=tRNA-Thr NZ_KK316784.1 tRNAscan-SE exon 849473 849544 . - . ID=exon-AL42_RS09610-1;Parent=rna-AL42_RS09610;anticodon=(pos:complement(849510..849512));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS09610;product=tRNA-Thr NZ_KK316784.1 RefSeq gene 849572 850297 . - . ID=gene-AL42_RS09615;Name=AL42_RS09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09615;old_locus_tag=AL42_00791 NZ_KK316784.1 Protein Homology CDS 849572 850297 . - 0 ID=cds-WP_003403862.1;Parent=gene-AL42_RS09615;Dbxref=GenBank:WP_003403862.1;Name=WP_003403862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215270.1;locus_tag=AL42_RS09615;product=hypothetical protein;protein_id=WP_003403862.1;transl_table=11 NZ_KK316784.1 RefSeq gene 850439 851182 . + . ID=gene-AL42_RS09620;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=AL42_RS09620;old_locus_tag=AL42_00792 NZ_KK316784.1 Protein Homology CDS 850439 851182 . + 0 ID=cds-WP_049951302.1;Parent=gene-AL42_RS09620;Dbxref=GenBank:WP_049951302.1;Name=WP_049951302.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215271.1;locus_tag=AL42_RS09620;product=two-component system response regulator PhoP;protein_id=WP_049951302.1;transl_table=11 NZ_KK316784.1 RefSeq gene 851227 852684 . + . ID=gene-AL42_RS09625;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=AL42_RS09625;old_locus_tag=AL42_00793 NZ_KK316784.1 Protein Homology CDS 851227 852684 . + 0 ID=cds-WP_003898576.1;Parent=gene-AL42_RS09625;Dbxref=GenBank:WP_003898576.1;Name=WP_003898576.1;gbkey=CDS;gene=phoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215272.1;locus_tag=AL42_RS09625;product=sensory box histidine kinase PhoR;protein_id=WP_003898576.1;transl_table=11 NZ_KK316784.1 RefSeq gene 852656 853057 . - . ID=gene-AL42_RS09630;Name=AL42_RS09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09630;old_locus_tag=AL42_00794 NZ_KK316784.1 Protein Homology CDS 852656 853057 . - 0 ID=cds-WP_003403876.1;Parent=gene-AL42_RS09630;Dbxref=GenBank:WP_003403876.1;Name=WP_003403876.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003403876.1;locus_tag=AL42_RS09630;product=HIT family protein;protein_id=WP_003403876.1;transl_table=11 NZ_KK316784.1 RefSeq gene 853097 853516 . - . ID=gene-AL42_RS09635;Name=AL42_RS09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09635;old_locus_tag=AL42_00795 NZ_KK316784.1 Protein Homology CDS 853097 853516 . - 0 ID=cds-WP_003403880.1;Parent=gene-AL42_RS09635;Dbxref=GenBank:WP_003403880.1;Name=WP_003403880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215274.1;locus_tag=AL42_RS09635;product=ketosteroid isomerase family protein;protein_id=WP_003403880.1;transl_table=11 NZ_KK316784.1 RefSeq gene 853529 854656 . - . ID=gene-AL42_RS09640;Name=adhB;gbkey=Gene;gene=adhB;gene_biotype=protein_coding;locus_tag=AL42_RS09640;old_locus_tag=AL42_00796 NZ_KK316784.1 Protein Homology CDS 853529 854656 . - 0 ID=cds-WP_003403885.1;Parent=gene-AL42_RS09640;Dbxref=GenBank:WP_003403885.1;Name=WP_003403885.1;gbkey=CDS;gene=adhB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177754.1;locus_tag=AL42_RS09640;product=NDMA-dependent alcohol dehydrogenase;protein_id=WP_003403885.1;transl_table=11 NZ_KK316784.1 RefSeq gene 854755 855300 . - . ID=gene-AL42_RS09645;Name=AL42_RS09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09645;old_locus_tag=AL42_00797 NZ_KK316784.1 Protein Homology CDS 854755 855300 . - 0 ID=cds-WP_003403887.1;Parent=gene-AL42_RS09645;Dbxref=GenBank:WP_003403887.1;Name=WP_003403887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215276.1;locus_tag=AL42_RS09645;product=Cif family virulence factor;protein_id=WP_003403887.1;transl_table=11 NZ_KK316784.1 RefSeq gene 855303 855509 . - . ID=gene-AL42_RS09650;Name=AL42_RS09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09650;old_locus_tag=AL42_00798 NZ_KK316784.1 Protein Homology CDS 855303 855509 . - 0 ID=cds-WP_003403890.1;Parent=gene-AL42_RS09650;Dbxref=GenBank:WP_003403890.1;Name=WP_003403890.1;Ontology_term=GO:0005506,GO:0009055,GO:0051536;gbkey=CDS;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215277.1;locus_tag=AL42_RS09650;product=ferredoxin;protein_id=WP_003403890.1;transl_table=11 NZ_KK316784.1 RefSeq gene 855512 856867 . - . ID=gene-AL42_RS09655;Name=cyp51;gbkey=Gene;gene=cyp51;gene_biotype=protein_coding;locus_tag=AL42_RS09655;old_locus_tag=AL42_00799 NZ_KK316784.1 Protein Homology CDS 855512 856867 . - 0 ID=cds-WP_003898577.1;Parent=gene-AL42_RS09655;Dbxref=GenBank:WP_003898577.1;Name=WP_003898577.1;gbkey=CDS;gene=cyp51;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215278.1;locus_tag=AL42_RS09655;product=lanosterol 14-alpha demethylase;protein_id=WP_003898577.1;transl_table=11 NZ_KK316784.1 RefSeq gene 856867 857694 . - . ID=gene-AL42_RS09660;Name=AL42_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09660;old_locus_tag=AL42_00800 NZ_KK316784.1 Protein Homology CDS 856867 857694 . - 0 ID=cds-WP_003898578.1;Parent=gene-AL42_RS09660;Dbxref=GenBank:WP_003898578.1;Name=WP_003898578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215279.1;locus_tag=AL42_RS09660;product=SDR family oxidoreductase;protein_id=WP_003898578.1;transl_table=11 NZ_KK316784.1 RefSeq gene 857694 858902 . - . ID=gene-AL42_RS09665;Name=AL42_RS09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09665;old_locus_tag=AL42_00801 NZ_KK316784.1 Protein Homology CDS 857694 858902 . - 0 ID=cds-WP_003403911.1;Parent=gene-AL42_RS09665;Dbxref=GenBank:WP_003403911.1;Name=WP_003403911.1;Ontology_term=GO:0004497,GO:0005506,GO:0016705,GO:0020037;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215280.1;locus_tag=AL42_RS09665;product=cytochrome P450;protein_id=WP_003403911.1;transl_table=11 NZ_KK316784.1 RefSeq gene 858899 859540 . - . ID=gene-AL42_RS09670;Name=AL42_RS09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09670;old_locus_tag=AL42_00802 NZ_KK316784.1 Protein Homology CDS 858899 859540 . - 0 ID=cds-WP_003403915.1;Parent=gene-AL42_RS09670;Dbxref=GenBank:WP_003403915.1;Name=WP_003403915.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215281.1;locus_tag=AL42_RS09670;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003403915.1;transl_table=11 NZ_KK316784.1 RefSeq gene 859742 861211 . + . ID=gene-AL42_RS09675;Name=aldA;gbkey=Gene;gene=aldA;gene_biotype=protein_coding;locus_tag=AL42_RS09675;old_locus_tag=AL42_00803 NZ_KK316784.1 Protein Homology CDS 859742 861211 . + 0 ID=cds-WP_003901913.1;Parent=gene-AL42_RS09675;Dbxref=GenBank:WP_003901913.1;Name=WP_003901913.1;Ontology_term=GO:0016903;gbkey=CDS;gene=aldA;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215282.1;locus_tag=AL42_RS09675;product=aldehyde dehydrogenase;protein_id=WP_003901913.1;transl_table=11 NZ_KK316784.1 RefSeq gene 861242 861988 . + . ID=gene-AL42_RS09680;Name=AL42_RS09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09680;old_locus_tag=AL42_00804 NZ_KK316784.1 Protein Homology CDS 861242 861988 . + 0 ID=cds-WP_003898579.1;Parent=gene-AL42_RS09680;Dbxref=GenBank:WP_003898579.1;Name=WP_003898579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215283.1;locus_tag=AL42_RS09680;product=SDR family oxidoreductase;protein_id=WP_003898579.1;transl_table=11 NZ_KK316784.1 RefSeq gene 862086 862973 . + . ID=gene-AL42_RS09685;Name=AL42_RS09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09685;old_locus_tag=AL42_00805 NZ_KK316784.1 Protein Homology CDS 862086 862973 . + 0 ID=cds-WP_003403924.1;Parent=gene-AL42_RS09685;Dbxref=GenBank:WP_003403924.1;Name=WP_003403924.1;Ontology_term=GO:0016491,GO:0050661,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215284.1;locus_tag=AL42_RS09685;product=NAD(P)-dependent oxidoreductase;protein_id=WP_003403924.1;transl_table=11 NZ_KK316784.1 RefSeq gene 862970 863404 . + . ID=gene-AL42_RS09690;Name=AL42_RS09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09690;old_locus_tag=AL42_00806 NZ_KK316784.1 Protein Homology CDS 862970 863404 . + 0 ID=cds-WP_003403928.1;Parent=gene-AL42_RS09690;Dbxref=GenBank:WP_003403928.1;Name=WP_003403928.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215285.1;locus_tag=AL42_RS09690;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_003403928.1;transl_table=11 NZ_KK316784.1 RefSeq gene 863416 864684 . + . ID=gene-AL42_RS09695;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=AL42_RS09695;old_locus_tag=AL42_00807 NZ_KK316784.1 Protein Homology CDS 863416 864684 . + 0 ID=cds-WP_003898580.1;Parent=gene-AL42_RS09695;Dbxref=GenBank:WP_003898580.1;Name=WP_003898580.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215286.1;locus_tag=AL42_RS09695;product=phosphoribosylamine--glycine ligase;protein_id=WP_003898580.1;transl_table=11 NZ_KK316784.1 RefSeq gene 864681 866264 . - . ID=gene-AL42_RS09700;Name=ggtA;gbkey=Gene;gene=ggtA;gene_biotype=protein_coding;locus_tag=AL42_RS09700;old_locus_tag=AL42_00808 NZ_KK316784.1 Protein Homology CDS 864681 866264 . - 0 ID=cds-WP_003918129.1;Parent=gene-AL42_RS09700;Dbxref=GenBank:WP_003918129.1;Name=WP_003918129.1;gbkey=CDS;gene=ggtA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003918129.1;locus_tag=AL42_RS09700;product=gamma-glutamyltranspeptidase GgtA;protein_id=WP_003918129.1;transl_table=11 NZ_KK316784.1 RefSeq gene 866270 867181 . - . ID=gene-AL42_RS09705;Name=AL42_RS09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09705;old_locus_tag=AL42_00809 NZ_KK316784.1 Protein Homology CDS 866270 867181 . - 0 ID=cds-WP_003403938.1;Parent=gene-AL42_RS09705;Dbxref=GenBank:WP_003403938.1;Name=WP_003403938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215288.2;locus_tag=AL42_RS09705;product=iron-stress inducible esterase;protein_id=WP_003403938.1;transl_table=11 NZ_KK316784.1 RefSeq gene 867237 867860 . + . ID=gene-AL42_RS09710;Name=AL42_RS09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09710;old_locus_tag=AL42_00810 NZ_KK316784.1 Protein Homology CDS 867237 867860 . + 0 ID=cds-WP_003403945.1;Parent=gene-AL42_RS09710;Dbxref=GenBank:WP_003403945.1;Name=WP_003403945.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215289.1;locus_tag=AL42_RS09710;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003403945.1;transl_table=11 NZ_KK316784.1 RefSeq gene 867814 868593 . - . ID=gene-AL42_RS09715;Name=AL42_RS09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09715;old_locus_tag=AL42_00811 NZ_KK316784.1 Protein Homology CDS 867814 868593 . - 0 ID=cds-WP_003403949.1;Parent=gene-AL42_RS09715;Dbxref=GenBank:WP_003403949.1;Name=WP_003403949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215290.1;locus_tag=AL42_RS09715;product=DUF429 domain-containing protein;protein_id=WP_003403949.1;transl_table=11 NZ_KK316784.1 RefSeq gene 868838 870256 . + . ID=gene-AL42_RS09720;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=AL42_RS09720;old_locus_tag=AL42_00812 NZ_KK316784.1 Protein Homology CDS 868838 870256 . + 0 ID=cds-WP_003898583.1;Parent=gene-AL42_RS09720;Dbxref=GenBank:WP_003898583.1;Name=WP_003898583.1;Ontology_term=GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215291.1;locus_tag=AL42_RS09720;product=adenylosuccinate lyase;protein_id=WP_003898583.1;transl_table=11 NZ_KK316784.1 RefSeq gene 870261 871505 . + . ID=gene-AL42_RS09725;Name=AL42_RS09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09725;old_locus_tag=AL42_00813 NZ_KK316784.1 Protein Homology CDS 870261 871505 . + 0 ID=cds-WP_003898584.1;Parent=gene-AL42_RS09725;Dbxref=GenBank:WP_003898584.1;Name=WP_003898584.1;Ontology_term=GO:0004497,GO:0005506,GO:0016705,GO:0020037;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215292.1;locus_tag=AL42_RS09725;product=cytochrome P450;protein_id=WP_003898584.1;transl_table=11 NZ_KK316784.1 RefSeq gene 871502 872122 . - . ID=gene-AL42_RS09730;Name=AL42_RS09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09730;old_locus_tag=AL42_00814 NZ_KK316784.1 Protein Homology CDS 871502 872122 . - 0 ID=cds-WP_003403957.1;Parent=gene-AL42_RS09730;Dbxref=GenBank:WP_003403957.1;Name=WP_003403957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215293.1;locus_tag=AL42_RS09730;product=hypothetical protein;protein_id=WP_003403957.1;transl_table=11 NZ_KK316784.1 RefSeq gene 872173 873066 . + . ID=gene-AL42_RS09735;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=AL42_RS09735;old_locus_tag=AL42_00815 NZ_KK316784.1 Protein Homology CDS 872173 873066 . + 0 ID=cds-WP_003403962.1;Parent=gene-AL42_RS09735;Dbxref=GenBank:WP_003403962.1;Name=WP_003403962.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215294.1;locus_tag=AL42_RS09735;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_003403962.1;transl_table=11 NZ_KK316784.1 RefSeq gene 873063 875222 . + . ID=gene-AL42_RS09740;Name=AL42_RS09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09740;old_locus_tag=AL42_00816 NZ_KK316784.1 Protein Homology CDS 873063 875222 . + 0 ID=cds-WP_003898586.1;Parent=gene-AL42_RS09740;Dbxref=GenBank:WP_003898586.1;Name=WP_003898586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003915458.1;locus_tag=AL42_RS09740;product=S9 family peptidase;protein_id=WP_003898586.1;transl_table=11 NZ_KK316784.1 RefSeq gene 875521 875661 . + . ID=gene-AL42_RS0104345;Name=AL42_RS0104345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0104345 NZ_KK316784.1 Protein Homology CDS 875521 875661 . + 0 ID=cds-WP_003403974.1;Parent=gene-AL42_RS0104345;Dbxref=GenBank:WP_003403974.1;Name=WP_003403974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003403974.1;locus_tag=AL42_RS0104345;product=WHG domain-containing protein;protein_id=WP_003403974.1;transl_table=11 NZ_KK316784.1 RefSeq gene 875650 877272 . - . ID=gene-AL42_RS09745;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=AL42_RS09745;old_locus_tag=AL42_00817 NZ_KK316784.1 Protein Homology CDS 875650 877272 . - 0 ID=cds-WP_003403977.1;Parent=gene-AL42_RS09745;Dbxref=GenBank:WP_003403977.1;Name=WP_003403977.1;gbkey=CDS;gene=emrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215297.1;locus_tag=AL42_RS09745;product=MFS transporter;protein_id=WP_003403977.1;transl_table=11 NZ_KK316784.1 RefSeq gene 877452 878156 . + . ID=gene-AL42_RS09750;Name=AL42_RS09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09750;old_locus_tag=AL42_00818 NZ_KK316784.1 Protein Homology CDS 877452 878156 . + 0 ID=cds-WP_003403980.1;Parent=gene-AL42_RS09750;Dbxref=GenBank:WP_003403980.1;Name=WP_003403980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003403980.1;locus_tag=AL42_RS09750;product=DUF2334 domain-containing protein;protein_id=WP_003403980.1;transl_table=11 NZ_KK316784.1 RefSeq gene 878172 879872 . + . ID=gene-AL42_RS09755;Name=AL42_RS09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09755;old_locus_tag=AL42_00819 NZ_KK316784.1 Protein Homology CDS 878172 879872 . + 0 ID=cds-WP_003898590.1;Parent=gene-AL42_RS09755;Dbxref=GenBank:WP_003898590.1;Name=WP_003898590.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215299.1;locus_tag=AL42_RS09755;product=FAD-binding dehydrogenase;protein_id=WP_003898590.1;transl_table=11 NZ_KK316784.1 RefSeq gene 879907 880545 . - . ID=gene-AL42_RS09760;Name=AL42_RS09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09760;old_locus_tag=AL42_00820 NZ_KK316784.1 Protein Homology CDS 879907 880545 . - 0 ID=cds-WP_003403989.1;Parent=gene-AL42_RS09760;Dbxref=GenBank:WP_003403989.1;Name=WP_003403989.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215300.2;locus_tag=AL42_RS09760;product=MBL fold metallo-hydrolase;protein_id=WP_003403989.1;transl_table=11 NZ_KK316784.1 RefSeq gene 880459 881250 . + . ID=gene-AL42_RS0104350;Name=AL42_RS0104350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0104350;old_locus_tag=AL42_00821 NZ_KK316784.1 Protein Homology CDS 880459 881250 . + 0 ID=cds-WP_021036368.1;Parent=gene-AL42_RS0104350;Dbxref=GenBank:WP_021036368.1;Name=WP_021036368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584682.1;locus_tag=AL42_RS0104350;product=hypothetical protein;protein_id=WP_021036368.1;transl_table=11 NZ_KK316784.1 RefSeq gene 881356 881595 . + . ID=gene-AL42_RS09765;Name=purS;gbkey=Gene;gene=purS;gene_biotype=protein_coding;locus_tag=AL42_RS09765;old_locus_tag=AL42_00822 NZ_KK316784.1 Protein Homology CDS 881356 881595 . + 0 ID=cds-WP_003403993.1;Parent=gene-AL42_RS09765;Dbxref=GenBank:WP_003403993.1;Name=WP_003403993.1;gbkey=CDS;gene=purS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177755.1;locus_tag=AL42_RS09765;product=phosphoribosylformylglycinamidine synthase subunit PurS;protein_id=WP_003403993.1;transl_table=11 NZ_KK316784.1 RefSeq gene 881592 882266 . + . ID=gene-AL42_RS09770;Name=purQ;gbkey=Gene;gene=purQ;gene_biotype=protein_coding;locus_tag=AL42_RS09770;old_locus_tag=AL42_00823 NZ_KK316784.1 Protein Homology CDS 881592 882266 . + 0 ID=cds-WP_003403995.1;Parent=gene-AL42_RS09770;Dbxref=GenBank:WP_003403995.1;Name=WP_003403995.1;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;gene=purQ;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215303.1;locus_tag=AL42_RS09770;product=phosphoribosylformylglycinamidine synthase subunit PurQ;protein_id=WP_003403995.1;transl_table=11 NZ_KK316784.1 RefSeq gene 882283 882756 . - . ID=gene-AL42_RS0104355;Name=AL42_RS0104355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0104355;old_locus_tag=AL42_00824 NZ_KK316784.1 Protein Homology CDS 882283 882756 . - 0 ID=cds-WP_014584683.1;Parent=gene-AL42_RS0104355;Dbxref=GenBank:WP_014584683.1;Name=WP_014584683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584683.1;locus_tag=AL42_RS0104355;product=hypothetical protein;protein_id=WP_014584683.1;transl_table=11 NZ_KK316784.1 RefSeq gene 882904 883632 . - . ID=gene-AL42_RS09775;Name=AL42_RS09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09775;old_locus_tag=AL42_00825 NZ_KK316784.1 Protein Homology CDS 882904 883632 . - 0 ID=cds-WP_003404002.1;Parent=gene-AL42_RS09775;Dbxref=GenBank:WP_003404002.1;Name=WP_003404002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215305.1;locus_tag=AL42_RS09775;product=transglutaminase-like domain-containing protein;protein_id=WP_003404002.1;transl_table=11 NZ_KK316784.1 RefSeq gene 883629 884672 . - . ID=gene-AL42_RS09780;Name=AL42_RS09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09780;old_locus_tag=AL42_00826 NZ_KK316784.1 Protein Homology CDS 883629 884672 . - 0 ID=cds-WP_003404004.1;Parent=gene-AL42_RS09780;Dbxref=GenBank:WP_003404004.1;Name=WP_003404004.1;Ontology_term=GO:0016705;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215306.1;locus_tag=AL42_RS09780;product=TIGR03619 family F420-dependent LLM class oxidoreductase;protein_id=WP_003404004.1;transl_table=11 NZ_KK316784.1 RefSeq gene 884669 885478 . - . ID=gene-AL42_RS09785;Name=AL42_RS09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09785;old_locus_tag=AL42_00827 NZ_KK316784.1 Protein Homology CDS 884669 885478 . - 0 ID=cds-WP_003404007.1;Parent=gene-AL42_RS09785;Dbxref=GenBank:WP_003404007.1;Name=WP_003404007.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215307.1;locus_tag=AL42_RS09785;product=Rv0792c family HTH-type transcriptional regulator;protein_id=WP_003404007.1;transl_table=11 NZ_KK316784.1 RefSeq gene 885551 885856 . + . ID=gene-AL42_RS09790;Name=AL42_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09790;old_locus_tag=AL42_00828 NZ_KK316784.1 Protein Homology CDS 885551 885856 . + 0 ID=cds-WP_003404010.1;Parent=gene-AL42_RS09790;Dbxref=GenBank:WP_003404010.1;Name=WP_003404010.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215308.1;locus_tag=AL42_RS09790;product=putative quinol monooxygenase;protein_id=WP_003404010.1;transl_table=11 NZ_KK316784.1 RefSeq gene 885969 887468 . - . ID=gene-AL42_RS09795;Name=AL42_RS09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09795;old_locus_tag=AL42_00829 NZ_KK316784.1 Protein Homology CDS 885969 887468 . - 0 ID=cds-WP_003404013.1;Parent=gene-AL42_RS09795;Dbxref=GenBank:WP_003404013.1;Name=WP_003404013.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177756.1;locus_tag=AL42_RS09795;product=dihydrolipoyl dehydrogenase family protein;protein_id=WP_003404013.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 887861 888934 . + . ID=gene-AL42_RS09800;Name=AL42_RS09800;end_range=888934,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS09800;old_locus_tag=AL42_00830;partial=true;pseudo=true NZ_KK316784.1 Protein Homology CDS 887861 888934 . + 0 ID=cds-AL42_RS09800;Parent=gene-AL42_RS09800;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=888934,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217844.1;locus_tag=AL42_RS09800;partial=true;product=IS110-like element IS1547 family transposase;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 888945 889742 . - . ID=gene-AL42_RS09805;Name=AL42_RS09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09805;old_locus_tag=AL42_00831 NZ_KK316784.1 Protein Homology CDS 888945 889742 . - 0 ID=cds-WP_003404092.1;Parent=gene-AL42_RS09805;Dbxref=GenBank:WP_003404092.1;Name=WP_003404092.1;Ontology_term=GO:0140737;gbkey=CDS;go_component=encapsulin nanocompartment|0140737||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215313.1;locus_tag=AL42_RS09805;product=family 1 encapsulin nanocompartment shell protein;protein_id=WP_003404092.1;transl_table=11 NZ_KK316784.1 RefSeq gene 889739 890746 . - . ID=gene-AL42_RS09810;Name=AL42_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09810;old_locus_tag=AL42_00832 NZ_KK316784.1 Protein Homology CDS 889739 890746 . - 0 ID=cds-WP_003404098.1;Parent=gene-AL42_RS09810;Dbxref=GenBank:WP_003404098.1;Name=WP_003404098.1;Ontology_term=GO:0004601,GO:0020037;gbkey=CDS;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215314.1;locus_tag=AL42_RS09810;product=Dyp-type peroxidase;protein_id=WP_003404098.1;transl_table=11 NZ_KK316784.1 RefSeq gene 890791 892092 . + . ID=gene-AL42_RS09815;Name=pepC;gbkey=Gene;gene=pepC;gene_biotype=protein_coding;locus_tag=AL42_RS09815;old_locus_tag=AL42_00833 NZ_KK316784.1 Protein Homology CDS 890791 892092 . + 0 ID=cds-WP_003404103.1;Parent=gene-AL42_RS09815;Dbxref=GenBank:WP_003404103.1;Name=WP_003404103.1;Ontology_term=GO:0006508,GO:0004177,GO:0008270;gbkey=CDS;gene=pepC;go_function=aminopeptidase activity|0004177||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215315.1;locus_tag=AL42_RS09815;product=M18 family aminopeptidase;protein_id=WP_003404103.1;transl_table=11 NZ_KK316784.1 RefSeq gene 892104 892451 . + . ID=gene-AL42_RS09820;Name=AL42_RS09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09820;old_locus_tag=AL42_00834 NZ_KK316784.1 Protein Homology CDS 892104 892451 . + 0 ID=cds-WP_003898592.1;Parent=gene-AL42_RS09820;Dbxref=GenBank:WP_003898592.1;Name=WP_003898592.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215316.1;locus_tag=AL42_RS09820;product=VOC family protein;protein_id=WP_003898592.1;transl_table=11 NZ_KK316784.1 RefSeq gene 892445 893101 . - . ID=gene-AL42_RS09825;Name=AL42_RS09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09825;old_locus_tag=AL42_00835 NZ_KK316784.1 Protein Homology CDS 892445 893101 . - 0 ID=cds-WP_003404111.1;Parent=gene-AL42_RS09825;Dbxref=GenBank:WP_003404111.1;Name=WP_003404111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215317.1;locus_tag=AL42_RS09825;product=acetyl-/succinyl-CoA transferase;protein_id=WP_003404111.1;transl_table=11 NZ_KK316784.1 RefSeq gene 893293 895557 . + . ID=gene-AL42_RS09830;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;locus_tag=AL42_RS09830;old_locus_tag=AL42_00836 NZ_KK316784.1 Protein Homology CDS 893293 895557 . + 0 ID=cds-WP_003404114.1;Parent=gene-AL42_RS09830;Dbxref=GenBank:WP_003404114.1;Name=WP_003404114.1;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215318.1;locus_tag=AL42_RS09830;product=phosphoribosylformylglycinamidine synthase subunit PurL;protein_id=WP_003404114.1;transl_table=11 NZ_KK316784.1 RefSeq gene 895554 896183 . + . ID=gene-AL42_RS09835;Name=AL42_RS09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09835;old_locus_tag=AL42_00837 NZ_KK316784.1 Protein Homology CDS 895554 896183 . + 0 ID=cds-WP_003404117.1;Parent=gene-AL42_RS09835;Dbxref=GenBank:WP_003404117.1;Name=WP_003404117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215319.1;locus_tag=AL42_RS09835;product=Rv0804 family intramembrane glutamic endopeptidase;protein_id=WP_003404117.1;transl_table=11 NZ_KK316784.1 RefSeq gene 896304 897260 . + . ID=gene-AL42_RS09840;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=AL42_RS09840;old_locus_tag=AL42_00838 NZ_KK316784.1 Protein Homology CDS 896304 897260 . + 0 ID=cds-WP_003404120.1;Parent=gene-AL42_RS09840;Dbxref=GenBank:WP_003404120.1;Name=WP_003404120.1;gbkey=CDS;gene=cpdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215320.1;locus_tag=AL42_RS09840;product=3'%2C5'-cyclic adenosine monophosphate phosphodiesterase CpdA;protein_id=WP_003404120.1;transl_table=11 NZ_KK316784.1 RefSeq gene 897205 898803 . - . ID=gene-AL42_RS09845;Name=cpsY;gbkey=Gene;gene=cpsY;gene_biotype=protein_coding;locus_tag=AL42_RS09845;old_locus_tag=AL42_00839 NZ_KK316784.1 Protein Homology CDS 897205 898803 . - 0 ID=cds-WP_003898594.1;Parent=gene-AL42_RS09845;Dbxref=GenBank:WP_003898594.1;Name=WP_003898594.1;gbkey=CDS;gene=cpsY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215321.1;locus_tag=AL42_RS09845;product=stealth family protein;protein_id=WP_003898594.1;transl_table=11 NZ_KK316784.1 RefSeq gene 899108 899497 . + . ID=gene-AL42_RS09850;Name=AL42_RS09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09850;old_locus_tag=AL42_00840 NZ_KK316784.1 Protein Homology CDS 899108 899497 . + 0 ID=cds-WP_003404127.1;Parent=gene-AL42_RS09850;Dbxref=GenBank:WP_003404127.1;Name=WP_003404127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215322.1;locus_tag=AL42_RS09850;product=sterol carrier family protein;protein_id=WP_003404127.1;transl_table=11 NZ_KK316784.1 RefSeq gene 899638 901167 . + . ID=gene-AL42_RS09855;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=AL42_RS09855;old_locus_tag=AL42_00841 NZ_KK316784.1 Protein Homology CDS 899638 901167 . + 0 ID=cds-WP_031646911.1;Parent=gene-AL42_RS09855;Dbxref=GenBank:WP_031646911.1;Name=WP_031646911.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911290.1;locus_tag=AL42_RS09855;product=amidophosphoribosyltransferase;protein_id=WP_031646911.1;transl_table=11 NZ_KK316784.1 RefSeq gene 901198 902292 . + . ID=gene-AL42_RS09860;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=AL42_RS09860;old_locus_tag=AL42_00842 NZ_KK316784.1 Protein Homology CDS 901198 902292 . + 0 ID=cds-WP_003404132.1;Parent=gene-AL42_RS09860;Dbxref=GenBank:WP_003404132.1;Name=WP_003404132.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215324.1;locus_tag=AL42_RS09860;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_003404132.1;transl_table=11 NZ_KK316784.1 RefSeq gene 902378 902560 . - . ID=gene-AL42_RS09865;Name=AL42_RS09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09865;old_locus_tag=AL42_00843 NZ_KK316784.1 Protein Homology CDS 902378 902560 . - 0 ID=cds-WP_003404135.1;Parent=gene-AL42_RS09865;Dbxref=GenBank:WP_003404135.1;Name=WP_003404135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007777661.1;locus_tag=AL42_RS09865;product=DUF3073 domain-containing protein;protein_id=WP_003404135.1;transl_table=11 NZ_KK316784.1 RefSeq gene 902707 903813 . - . ID=gene-AL42_RS09870;Name=AL42_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09870;old_locus_tag=AL42_00844 NZ_KK316784.1 Protein Homology CDS 902707 903813 . - 0 ID=cds-WP_003404137.1;Parent=gene-AL42_RS09870;Dbxref=GenBank:WP_003404137.1;Name=WP_003404137.1;Ontology_term=GO:0016226,GO:0016740,GO:0005739;gbkey=CDS;go_component=mitochondrion|0005739||IEA;go_function=transferase activity|0016740||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215326.1;locus_tag=AL42_RS09870;product=CAF17-like 4Fe-4S cluster assembly/insertion protein YgfZ;protein_id=WP_003404137.1;transl_table=11 NZ_KK316784.1 RefSeq gene 903896 904765 . + . ID=gene-AL42_RS09875;Name=AL42_RS09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09875;old_locus_tag=AL42_00845 NZ_KK316784.1 Protein Homology CDS 903896 904765 . + 0 ID=cds-WP_003404139.1;Parent=gene-AL42_RS09875;Dbxref=GenBank:WP_003404139.1;Name=WP_003404139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177757.1;locus_tag=AL42_RS09875;product=aminodeoxychorismate lyase;protein_id=WP_003404139.1;transl_table=11 NZ_KK316784.1 RefSeq gene 904811 905491 . - . ID=gene-AL42_RS09880;Name=AL42_RS09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09880;old_locus_tag=AL42_00846 NZ_KK316784.1 Protein Homology CDS 904811 905491 . - 0 ID=cds-WP_003898596.1;Parent=gene-AL42_RS09880;Dbxref=GenBank:WP_003898596.1;Name=WP_003898596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215328.1;locus_tag=AL42_RS09880;product=nitrobindin family protein;protein_id=WP_003898596.1;transl_table=11 NZ_KK316784.1 RefSeq gene 905654 905956 . - . ID=gene-AL42_RS09885;Name=AL42_RS09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09885;old_locus_tag=AL42_00847 NZ_KK316784.1 Protein Homology CDS 905654 905956 . - 0 ID=cds-WP_003905391.1;Parent=gene-AL42_RS09885;Dbxref=GenBank:WP_003905391.1;Name=WP_003905391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003877205.1;locus_tag=AL42_RS09885;product=DUF1416 domain-containing protein;protein_id=WP_003905391.1;transl_table=11 NZ_KK316784.1 RefSeq gene 905958 906791 . - . ID=gene-AL42_RS09890;Name=AL42_RS09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09890;old_locus_tag=AL42_00848 NZ_KK316784.1 Protein Homology CDS 905958 906791 . - 0 ID=cds-WP_003404293.1;Parent=gene-AL42_RS09890;Dbxref=GenBank:WP_003404293.1;Name=WP_003404293.1;Ontology_term=GO:0000098,GO:0016783;gbkey=CDS;go_function=sulfurtransferase activity|0016783||IEA;go_process=sulfur amino acid catabolic process|0000098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215330.1;locus_tag=AL42_RS09890;product=sulfurtransferase;protein_id=WP_003404293.1;transl_table=11 NZ_KK316784.1 RefSeq gene 906965 907078 . - . ID=gene-AL42_RS27905;Name=AL42_RS27905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27905 NZ_KK316784.1 Protein Homology CDS 906965 907078 . - 0 ID=cds-WP_349814712.1;Parent=gene-AL42_RS27905;Dbxref=GenBank:WP_349814712.1;Name=WP_349814712.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042933.1;locus_tag=AL42_RS27905;product=Ms5788A family Cys-rich leader peptide;protein_id=WP_349814712.1;transl_table=11 NZ_KK316784.1 RefSeq gene 907084 907506 . - . ID=gene-AL42_RS09895;Name=thiX;gbkey=Gene;gene=thiX;gene_biotype=protein_coding;locus_tag=AL42_RS09895;old_locus_tag=AL42_00849 NZ_KK316784.1 Protein Homology CDS 907084 907506 . - 0 ID=cds-WP_003898598.1;Parent=gene-AL42_RS09895;Dbxref=GenBank:WP_003898598.1;Name=WP_003898598.1;Ontology_term=GO:0015035;gbkey=CDS;gene=thiX;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215331.1;locus_tag=AL42_RS09895;product=thioredoxin family protein;protein_id=WP_003898598.1;transl_table=11 NZ_KK316784.1 RefSeq gene 907503 908315 . - . ID=gene-AL42_RS09900;Name=lmeA;gbkey=Gene;gene=lmeA;gene_biotype=protein_coding;locus_tag=AL42_RS09900;old_locus_tag=AL42_00850 NZ_KK316784.1 Protein Homology CDS 907503 908315 . - 0 ID=cds-WP_003404298.1;Parent=gene-AL42_RS09900;Dbxref=GenBank:WP_003404298.1;Name=WP_003404298.1;gbkey=CDS;gene=lmeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215332.1;locus_tag=AL42_RS09900;product=mannan chain length control protein LmeA;protein_id=WP_003404298.1;transl_table=11 NZ_KK316784.1 RefSeq gene 908445 909212 . + . ID=gene-AL42_RS09905;Name=AL42_RS09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09905;old_locus_tag=AL42_00851 NZ_KK316784.1 Protein Homology CDS 908445 909212 . + 0 ID=cds-WP_003898599.1;Parent=gene-AL42_RS09905;Dbxref=GenBank:WP_003898599.1;Name=WP_003898599.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215333.1;locus_tag=AL42_RS09905;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_003898599.1;transl_table=11 NZ_KK316784.1 RefSeq gene 909209 910156 . + . ID=gene-AL42_RS09910;Name=mshD;gbkey=Gene;gene=mshD;gene_biotype=protein_coding;locus_tag=AL42_RS09910;old_locus_tag=AL42_00852 NZ_KK316784.1 Protein Homology CDS 909209 910156 . + 0 ID=cds-WP_003404307.1;Parent=gene-AL42_RS09910;Dbxref=GenBank:WP_003404307.1;Name=WP_003404307.1;Ontology_term=GO:0010125,GO:0035447;gbkey=CDS;gene=mshD;go_function=mycothiol synthase activity|0035447||IEA;go_process=mycothiol biosynthetic process|0010125||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215334.1;locus_tag=AL42_RS09910;product=mycothiol synthase;protein_id=WP_003404307.1;transl_table=11 NZ_KK316784.1 RefSeq gene 910199 910975 . + . ID=gene-AL42_RS09915;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=AL42_RS09915;old_locus_tag=AL42_00853 NZ_KK316784.1 Protein Homology CDS 910199 910975 . + 0 ID=cds-WP_003404312.1;Parent=gene-AL42_RS09915;Dbxref=GenBank:WP_003404312.1;Name=WP_003404312.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215335.1;locus_tag=AL42_RS09915;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_003404312.1;transl_table=11 NZ_KK316784.1 RefSeq gene 911031 911672 . - . ID=gene-AL42_RS09920;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=AL42_RS09920;old_locus_tag=AL42_00854 NZ_KK316784.1 Protein Homology CDS 911031 911672 . - 0 ID=cds-WP_003404314.1;Parent=gene-AL42_RS09920;Dbxref=GenBank:WP_003404314.1;Name=WP_003404314.1;Ontology_term=GO:0006817,GO:0030643,GO:0045936;gbkey=CDS;gene=phoU;go_process=phosphate ion transport|0006817||IEA,intracellular phosphate ion homeostasis|0030643||IEA,negative regulation of phosphate metabolic process|0045936||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215336.1;locus_tag=AL42_RS09920;product=phosphate signaling complex protein PhoU;protein_id=WP_003404314.1;transl_table=11 NZ_KK316784.1 RefSeq gene 911730 913784 . - . ID=gene-AL42_RS09925;Name=AL42_RS09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09925;old_locus_tag=AL42_00855 NZ_KK316784.1 Protein Homology CDS 911730 913784 . - 0 ID=cds-WP_031721794.1;Parent=gene-AL42_RS09925;Dbxref=GenBank:WP_031721794.1;Name=WP_031721794.1;Ontology_term=GO:0070726,GO:0071555,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=cell wall assembly|0070726||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215337.1;locus_tag=AL42_RS09925;product=LCP family protein;protein_id=WP_031721794.1;transl_table=11 NZ_KK316784.1 RefSeq gene 913950 915116 . - . ID=gene-AL42_RS09930;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=AL42_RS09930;old_locus_tag=AL42_00856 NZ_KK316784.1 Protein Homology CDS 913950 915116 . - 0 ID=cds-WP_003901917.1;Parent=gene-AL42_RS09930;Dbxref=GenBank:WP_003901917.1;Name=WP_003901917.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215338.1;locus_tag=AL42_RS09930;product=tRNA dihydrouridine synthase DusB;protein_id=WP_003901917.1;transl_table=11 NZ_KK316784.1 RefSeq gene 915204 916220 . - . ID=gene-AL42_RS09935;Name=desA1;gbkey=Gene;gene=desA1;gene_biotype=protein_coding;locus_tag=AL42_RS09935;old_locus_tag=AL42_00857 NZ_KK316784.1 Protein Homology CDS 915204 916220 . - 0 ID=cds-WP_003404321.1;Parent=gene-AL42_RS09935;Dbxref=GenBank:WP_003404321.1;Name=WP_003404321.1;gbkey=CDS;gene=desA1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177758.1;locus_tag=AL42_RS09935;product=acyl-ACP desaturase DesA1;protein_id=WP_003404321.1;transl_table=11 NZ_KK316784.1 RefSeq gene 916382 917023 . - . ID=gene-AL42_RS09940;Name=AL42_RS09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09940;old_locus_tag=AL42_00858 NZ_KK316784.1 Protein Homology CDS 916382 917023 . - 0 ID=cds-WP_003901918.1;Parent=gene-AL42_RS09940;Dbxref=GenBank:WP_003901918.1;Name=WP_003901918.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215340.1;locus_tag=AL42_RS09940;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003901918.1;transl_table=11 NZ_KK316784.1 RefSeq gene 917104 918159 . + . ID=gene-AL42_RS09945;Name=AL42_RS09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09945;old_locus_tag=AL42_00859 NZ_KK316784.1 Protein Homology CDS 917104 918159 . + 0 ID=cds-WP_003898602.1;Parent=gene-AL42_RS09945;Dbxref=GenBank:WP_003898602.1;Name=WP_003898602.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215341.1;locus_tag=AL42_RS09945;product=oxygenase MpaB family protein;protein_id=WP_003898602.1;transl_table=11 NZ_KK316784.1 RefSeq gene 918211 918603 . - . ID=gene-AL42_RS09950;Name=kmtR;gbkey=Gene;gene=kmtR;gene_biotype=protein_coding;locus_tag=AL42_RS09950;old_locus_tag=AL42_00860 NZ_KK316784.1 Protein Homology CDS 918211 918603 . - 0 ID=cds-WP_003404335.1;Parent=gene-AL42_RS09950;Dbxref=GenBank:WP_003404335.1;Name=WP_003404335.1;gbkey=CDS;gene=kmtR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215342.1;locus_tag=AL42_RS09950;product=Ni(II)/Co(II)-sensing metalloregulatory transcriptional repressor KmtR;protein_id=WP_003404335.1;transl_table=11 NZ_KK316784.1 RefSeq gene 918661 919008 . - . ID=gene-AL42_RS09955;Name=AL42_RS09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09955;old_locus_tag=AL42_00861 NZ_KK316784.1 Protein Homology CDS 918661 919008 . - 0 ID=cds-WP_078377808.1;Parent=gene-AL42_RS09955;Dbxref=GenBank:WP_078377808.1;Name=WP_078377808.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012601.6;locus_tag=AL42_RS09955;product=tRNA-specific adenosine deaminase;protein_id=WP_078377808.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 919035 919335 . + . ID=gene-AL42_RS09960;Name=AL42_RS09960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS09960;old_locus_tag=AL42_00862;partial=true;pseudo=true;start_range=.,919035 NZ_KK316784.1 Protein Homology CDS 919035 919335 . + 0 ID=cds-AL42_RS09960;Parent=gene-AL42_RS09960;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015288650.1;locus_tag=AL42_RS09960;partial=true;product=zinc ribbon domain-containing protein;pseudo=true;start_range=.,919035;transl_table=11 NZ_KK316784.1 RefSeq gene 919440 920345 . + . ID=gene-AL42_RS09965;Name=AL42_RS09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09965;old_locus_tag=AL42_00863 NZ_KK316784.1 Protein Homology CDS 919440 920345 . + 0 ID=cds-WP_003404349.1;Parent=gene-AL42_RS09965;Dbxref=GenBank:WP_003404349.1;Name=WP_003404349.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215345.1;locus_tag=AL42_RS09965;product=SAM-dependent methyltransferase;protein_id=WP_003404349.1;transl_table=11 NZ_KK316784.1 RefSeq gene 920364 921179 . - . ID=gene-AL42_RS09970;Name=AL42_RS09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS09970;old_locus_tag=AL42_00864 NZ_KK316784.1 Protein Homology CDS 920364 921179 . - 0 ID=cds-WP_003404352.1;Parent=gene-AL42_RS09970;Dbxref=GenBank:WP_003404352.1;Name=WP_003404352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215346.1;locus_tag=AL42_RS09970;product=TIGR04255 family protein;protein_id=WP_003404352.1;transl_table=11 NZ_KK316784.1 RefSeq gene 921273 921345 . - . ID=gene-AL42_RS09975;Name=AL42_RS09975;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL42_RS09975;old_locus_tag=AL42_00865 NZ_KK316784.1 tRNAscan-SE tRNA 921273 921345 . - . ID=rna-AL42_RS09975;Parent=gene-AL42_RS09975;anticodon=(pos:complement(921310..921312));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS09975;product=tRNA-Lys NZ_KK316784.1 tRNAscan-SE exon 921273 921345 . - . ID=exon-AL42_RS09975-1;Parent=rna-AL42_RS09975;anticodon=(pos:complement(921310..921312));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS09975;product=tRNA-Lys NZ_KK316784.1 RefSeq gene 921469 921542 . + . ID=gene-AL42_RS09980;Name=AL42_RS09980;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL42_RS09980;old_locus_tag=AL42_00866 NZ_KK316784.1 tRNAscan-SE tRNA 921469 921542 . + . ID=rna-AL42_RS09980;Parent=gene-AL42_RS09980;anticodon=(pos:921504..921506);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS09980;product=tRNA-Glu NZ_KK316784.1 tRNAscan-SE exon 921469 921542 . + . ID=exon-AL42_RS09980-1;Parent=rna-AL42_RS09980;anticodon=(pos:921504..921506);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS09980;product=tRNA-Glu NZ_KK316784.1 RefSeq gene 921580 921656 . + . ID=gene-AL42_RS09985;Name=AL42_RS09985;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL42_RS09985;old_locus_tag=AL42_00867 NZ_KK316784.1 tRNAscan-SE tRNA 921580 921656 . + . ID=rna-AL42_RS09985;Parent=gene-AL42_RS09985;anticodon=(pos:921614..921616);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS09985;product=tRNA-Asp NZ_KK316784.1 tRNAscan-SE exon 921580 921656 . + . ID=exon-AL42_RS09985-1;Parent=rna-AL42_RS09985;anticodon=(pos:921614..921616);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS09985;product=tRNA-Asp NZ_KK316784.1 RefSeq gene 921683 921759 . + . ID=gene-AL42_RS09990;Name=AL42_RS09990;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL42_RS09990;old_locus_tag=AL42_00868 NZ_KK316784.1 tRNAscan-SE tRNA 921683 921759 . + . ID=rna-AL42_RS09990;Parent=gene-AL42_RS09990;anticodon=(pos:921717..921719);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS09990;product=tRNA-Phe NZ_KK316784.1 tRNAscan-SE exon 921683 921759 . + . ID=exon-AL42_RS09990-1;Parent=rna-AL42_RS09990;anticodon=(pos:921717..921719);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS09990;product=tRNA-Phe NZ_KK316784.1 RefSeq gene 922421 922834 . + . ID=gene-AL42_RS27485;Name=AL42_RS27485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27485;old_locus_tag=AL42_00869 NZ_KK316784.1 Protein Homology CDS 922421 922834 . + 0 ID=cds-WP_003404353.1;Parent=gene-AL42_RS27485;Dbxref=GenBank:WP_003404353.1;Name=WP_003404353.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177759.1;locus_tag=AL42_RS27485;product=PE family protein;protein_id=WP_003404353.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 922831 922914 . + . ID=gene-AL42_RS28085;Name=AL42_RS28085;end_range=922914,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS28085;partial=true;pseudo=true NZ_KK316784.1 Protein Homology CDS 922831 922914 . + 0 ID=cds-AL42_RS28085;Parent=gene-AL42_RS28085;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=922914,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF044496.3;locus_tag=AL42_RS28085;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 923707 923802 . + . ID=gene-AL42_RS28090;Name=AL42_RS28090;end_range=923802,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS28090;partial=true;pseudo=true;start_range=.,923707 NZ_KK316784.1 Protein Homology CDS 923707 923802 . + 0 ID=cds-AL42_RS28090;Parent=gene-AL42_RS28090;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=923802,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177759.1;locus_tag=AL42_RS28090;partial=true;product=PE family protein;pseudo=true;start_range=.,923707;transl_table=11 NZ_KK316784.1 RefSeq gene 924700 924879 . + . ID=gene-AL42_RS27915;Name=AL42_RS27915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27915 NZ_KK316784.1 Protein Homology CDS 924700 924879 . + 0 ID=cds-WP_003404355.1;Parent=gene-AL42_RS27915;Dbxref=GenBank:WP_003404355.1;Name=WP_003404355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003404355.1;locus_tag=AL42_RS27915;product=hypothetical protein;protein_id=WP_003404355.1;transl_table=11 NZ_KK316784.1 RefSeq gene 924908 927556 . - . ID=gene-AL42_RS10005;Name=AL42_RS10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10005;old_locus_tag=AL42_00871 NZ_KK316784.1 Protein Homology CDS 924908 927556 . - 0 ID=cds-WP_010886090.1;Parent=gene-AL42_RS10005;Dbxref=GenBank:WP_010886090.1;Name=WP_010886090.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177761.1;locus_tag=AL42_RS10005;product=PE family protein;protein_id=WP_010886090.1;transl_table=11 NZ_KK316784.1 RefSeq gene 928024 928668 . + . ID=gene-AL42_RS10010;Name=lpqQ;gbkey=Gene;gene=lpqQ;gene_biotype=protein_coding;locus_tag=AL42_RS10010;old_locus_tag=AL42_00872 NZ_KK316784.1 Protein Homology CDS 928024 928668 . + 0 ID=cds-WP_003404362.1;Parent=gene-AL42_RS10010;Dbxref=GenBank:WP_003404362.1;Name=WP_003404362.1;gbkey=CDS;gene=lpqQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215350.1;locus_tag=AL42_RS10010;product=sensor domain-containing protein;protein_id=WP_003404362.1;transl_table=11 NZ_KK316784.1 RefSeq gene 928649 929005 . - . ID=gene-AL42_RS27490;Name=AL42_RS27490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27490 NZ_KK316784.1 Protein Homology CDS 928649 929005 . - 0 ID=cds-WP_003911324.1;Parent=gene-AL42_RS27490;Dbxref=GenBank:WP_003911324.1;Name=WP_003911324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911324.1;locus_tag=AL42_RS27490;product=hypothetical protein;protein_id=WP_003911324.1;transl_table=11 NZ_KK316784.1 RefSeq gene 929281 930096 . - . ID=gene-AL42_RS10015;Name=AL42_RS10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10015;old_locus_tag=AL42_00873 NZ_KK316784.1 Protein Homology CDS 929281 930096 . - 0 ID=cds-WP_003404365.1;Parent=gene-AL42_RS10015;Dbxref=GenBank:WP_003404365.1;Name=WP_003404365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015629722.1;locus_tag=AL42_RS10015;product=hypothetical protein;protein_id=WP_003404365.1;transl_table=11 NZ_KK316784.1 RefSeq gene 930074 931102 . - . ID=gene-AL42_RS10020;Name=AL42_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10020;old_locus_tag=AL42_00874 NZ_KK316784.1 Protein Homology CDS 930074 931102 . - 0 ID=cds-WP_003404368.1;Parent=gene-AL42_RS10020;Dbxref=GenBank:WP_003404368.1;Name=WP_003404368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215352.1;locus_tag=AL42_RS10020;product=type IV toxin-antitoxin system AbiEi family antitoxin;protein_id=WP_003404368.1;transl_table=11 NZ_KK316784.1 RefSeq gene 931794 932564 . + . ID=gene-AL42_RS10025;Name=lpqR;gbkey=Gene;gene=lpqR;gene_biotype=protein_coding;locus_tag=AL42_RS10025;old_locus_tag=AL42_00875 NZ_KK316784.1 Protein Homology CDS 931794 932564 . + 0 ID=cds-WP_003898609.1;Parent=gene-AL42_RS10025;Dbxref=GenBank:WP_003898609.1;Name=WP_003898609.1;gbkey=CDS;gene=lpqR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215353.1;locus_tag=AL42_RS10025;product=M15 family metallopeptidase;protein_id=WP_003898609.1;transl_table=11 NZ_KK316784.1 RefSeq gene 932651 933463 . + . ID=gene-AL42_RS10030;Name=AL42_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10030;old_locus_tag=AL42_00876 NZ_KK316784.1 Protein Homology CDS 932651 933463 . + 0 ID=cds-WP_003404373.1;Parent=gene-AL42_RS10030;Dbxref=GenBank:WP_003404373.1;Name=WP_003404373.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215354.1;locus_tag=AL42_RS10030;product=class I SAM-dependent methyltransferase;protein_id=WP_003404373.1;transl_table=11 NZ_KK316784.1 RefSeq gene 933531 934391 . - . ID=gene-AL42_RS10035;Name=pip;gbkey=Gene;gene=pip;gene_biotype=protein_coding;locus_tag=AL42_RS10035;old_locus_tag=AL42_00877 NZ_KK316784.1 Protein Homology CDS 933531 934391 . - 0 ID=cds-WP_003404376.1;Parent=gene-AL42_RS10035;Dbxref=GenBank:WP_003404376.1;Name=WP_003404376.1;gbkey=CDS;gene=pip;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215355.1;locus_tag=AL42_RS10035;product=proline-specific peptidase family protein;protein_id=WP_003404376.1;transl_table=11 NZ_KK316784.1 RefSeq gene 935186 936478 . + . ID=gene-AL42_RS10045;Name=AL42_RS10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10045;old_locus_tag=AL42_00879 NZ_KK316784.1 Protein Homology CDS 935186 936478 . + 0 ID=cds-WP_003404382.1;Parent=gene-AL42_RS10045;Dbxref=GenBank:WP_003404382.1;Name=WP_003404382.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215357.1;locus_tag=AL42_RS10045;product=MFS transporter;protein_id=WP_003404382.1;transl_table=11 NZ_KK316784.1 RefSeq gene 936462 937466 . + . ID=gene-AL42_RS10050;Name=AL42_RS10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10050;old_locus_tag=AL42_00880 NZ_KK316784.1 Protein Homology CDS 936462 937466 . + 0 ID=cds-WP_003404384.1;Parent=gene-AL42_RS10050;Dbxref=GenBank:WP_003404384.1;Name=WP_003404384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215358.1;locus_tag=AL42_RS10050;product=thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha;protein_id=WP_003404384.1;transl_table=11 NZ_KK316784.1 RefSeq gene 937530 938180 . - . ID=gene-AL42_RS10055;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=AL42_RS10055;old_locus_tag=AL42_00881 NZ_KK316784.1 Protein Homology CDS 937530 938180 . - 0 ID=cds-WP_003901023.1;Parent=gene-AL42_RS10055;Dbxref=GenBank:WP_003901023.1;Name=WP_003901023.1;gbkey=CDS;gene=narL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215359.1;locus_tag=AL42_RS10055;product=two-component system response regulator NarL;protein_id=WP_003901023.1;transl_table=11 NZ_KK316784.1 RefSeq gene 938321 939541 . + . ID=gene-AL42_RS10060;Name=AL42_RS10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10060;old_locus_tag=AL42_00882 NZ_KK316784.1 Protein Homology CDS 938321 939541 . + 0 ID=cds-WP_015287938.1;Parent=gene-AL42_RS10060;Dbxref=GenBank:WP_015287938.1;Name=WP_015287938.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015287938.1;locus_tag=AL42_RS10060;product=sensor histidine kinase;protein_id=WP_015287938.1;transl_table=11 NZ_KK316784.1 RefSeq gene 939754 941268 . - . ID=gene-AL42_RS10065;Name=mmcO;gbkey=Gene;gene=mmcO;gene_biotype=protein_coding;locus_tag=AL42_RS10065;old_locus_tag=AL42_00883 NZ_KK316784.1 Protein Homology CDS 939754 941268 . - 0 ID=cds-WP_003404392.1;Parent=gene-AL42_RS10065;Dbxref=GenBank:WP_003404392.1;Name=WP_003404392.1;gbkey=CDS;gene=mmcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215361.1;locus_tag=AL42_RS10065;product=multicopper oxidase MmcO;protein_id=WP_003404392.1;transl_table=11 NZ_KK316784.1 RefSeq gene 941417 941809 . + . ID=gene-AL42_RS10070;Name=lpqs;gbkey=Gene;gene=lpqs;gene_biotype=protein_coding;locus_tag=AL42_RS10070;old_locus_tag=AL42_00884 NZ_KK316784.1 Protein Homology CDS 941417 941809 . + 0 ID=cds-WP_003901025.1;Parent=gene-AL42_RS10070;Dbxref=GenBank:WP_003901025.1;Name=WP_003901025.1;gbkey=CDS;gene=lpqs;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215362.1;locus_tag=AL42_RS10070;product=putative copper homeostasis (lipo)protein LpqS;protein_id=WP_003901025.1;transl_table=11 NZ_KK316784.1 RefSeq gene 942012 943130 . + . ID=gene-AL42_RS10075;Name=cysK2;gbkey=Gene;gene=cysK2;gene_biotype=protein_coding;locus_tag=AL42_RS10075;old_locus_tag=AL42_00885 NZ_KK316784.1 Protein Homology CDS 942012 943130 . + 0 ID=cds-WP_003404395.1;Parent=gene-AL42_RS10075;Dbxref=GenBank:WP_003404395.1;Name=WP_003404395.1;gbkey=CDS;gene=cysK2;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177762.1;locus_tag=AL42_RS10075;product=S-sulfocysteine synthase CysK2;protein_id=WP_003404395.1;transl_table=11 NZ_KK316784.1 RefSeq gene 943130 944389 . + . ID=gene-AL42_RS10080;Name=AL42_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10080;old_locus_tag=AL42_00886 NZ_KK316784.1 Protein Homology CDS 943130 944389 . + 0 ID=cds-WP_003404402.1;Parent=gene-AL42_RS10080;Dbxref=GenBank:WP_003404402.1;Name=WP_003404402.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215364.1;locus_tag=AL42_RS10080;product=MDR family MFS transporter;protein_id=WP_003404402.1;transl_table=11 NZ_KK316784.1 RefSeq gene 944386 944718 . + . ID=gene-AL42_RS10085;Name=AL42_RS10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10085;old_locus_tag=AL42_00887 NZ_KK316784.1 Protein Homology CDS 944386 944718 . + 0 ID=cds-WP_003404404.1;Parent=gene-AL42_RS10085;Dbxref=GenBank:WP_003404404.1;Name=WP_003404404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003404404.1;locus_tag=AL42_RS10085;product=transposase;protein_id=WP_003404404.1;transl_table=11 NZ_KK316784.1 RefSeq gene 944715 945542 . - . ID=gene-AL42_RS10090;Name=AL42_RS10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10090;old_locus_tag=AL42_00888 NZ_KK316784.1 Protein Homology CDS 944715 945542 . - 0 ID=cds-WP_003898616.1;Parent=gene-AL42_RS10090;Dbxref=GenBank:WP_003898616.1;Name=WP_003898616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215366.1;locus_tag=AL42_RS10090;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_003898616.1;transl_table=11 NZ_KK316784.1 RefSeq gene 945831 946469 . + . ID=gene-AL42_RS0104380;Name=AL42_RS0104380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0104380;old_locus_tag=AL42_00889 NZ_KK316784.1 Protein Homology CDS 945831 946469 . + 0 ID=cds-WP_003913008.1;Parent=gene-AL42_RS0104380;Dbxref=GenBank:WP_003913008.1;Name=WP_003913008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215367.2;locus_tag=AL42_RS0104380;product=hypothetical protein;protein_id=WP_003913008.1;transl_table=11 NZ_KK316784.1 RefSeq gene 946510 948192 . - . ID=gene-AL42_RS10095;Name=pdc;gbkey=Gene;gene=pdc;gene_biotype=protein_coding;locus_tag=AL42_RS10095;old_locus_tag=AL42_00890 NZ_KK316784.1 Protein Homology CDS 946510 948192 . - 0 ID=cds-WP_003900222.1;Parent=gene-AL42_RS10095;Dbxref=GenBank:WP_003900222.1;Name=WP_003900222.1;gbkey=CDS;gene=pdc;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215368.1;locus_tag=AL42_RS10095;product=alpha-keto-acid decarboxylase;protein_id=WP_003900222.1;transl_table=11 NZ_KK316784.1 RefSeq gene 948257 948700 . + . ID=gene-AL42_RS10100;Name=AL42_RS10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10100;old_locus_tag=AL42_00891 NZ_KK316784.1 Protein Homology CDS 948257 948700 . + 0 ID=cds-WP_003404412.1;Parent=gene-AL42_RS10100;Dbxref=GenBank:WP_003404412.1;Name=WP_003404412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215369.1;locus_tag=AL42_RS10100;product=SRPBCC family protein;protein_id=WP_003404412.1;transl_table=11 NZ_KK316784.1 RefSeq gene 948706 949785 . + . ID=gene-AL42_RS10105;Name=far;gbkey=Gene;gene=far;gene_biotype=protein_coding;locus_tag=AL42_RS10105;old_locus_tag=AL42_00892 NZ_KK316784.1 Protein Homology CDS 948706 949785 . + 0 ID=cds-WP_003905398.1;Parent=gene-AL42_RS10105;Dbxref=GenBank:WP_003905398.1;Name=WP_003905398.1;gbkey=CDS;gene=far;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215370.1;locus_tag=AL42_RS10105;product=fatty-acid-CoA racemase;protein_id=WP_003905398.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 949844 950303 . + . ID=gene-AL42_RS10110;Name=AL42_RS10110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS10110;old_locus_tag=AL42_00893;pseudo=true NZ_KK316784.1 Protein Homology CDS 949844 950303 . + 0 ID=cds-AL42_RS10110;Parent=gene-AL42_RS10110;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017351365.1;locus_tag=AL42_RS10110;product=SRPBCC family protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 950352 950804 . + . ID=gene-AL42_RS10115;Name=AL42_RS10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10115;old_locus_tag=AL42_00894 NZ_KK316784.1 Protein Homology CDS 950352 950804 . + 0 ID=cds-WP_003911328.1;Parent=gene-AL42_RS10115;Dbxref=GenBank:WP_003911328.1;Name=WP_003911328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015287941.1;locus_tag=AL42_RS10115;product=SRPBCC family protein;protein_id=WP_003911328.1;transl_table=11 NZ_KK316784.1 RefSeq gene 950801 951994 . - . ID=gene-AL42_RS10120;Name=dapC;gbkey=Gene;gene=dapC;gene_biotype=protein_coding;locus_tag=AL42_RS10120;old_locus_tag=AL42_00895 NZ_KK316784.1 Protein Homology CDS 950801 951994 . - 0 ID=cds-WP_003905399.1;Parent=gene-AL42_RS10120;Dbxref=GenBank:WP_003905399.1;Name=WP_003905399.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=dapC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215373.1;locus_tag=AL42_RS10120;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_003905399.1;transl_table=11 NZ_KK316784.1 RefSeq gene 952151 953362 . + . ID=gene-AL42_RS10125;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=AL42_RS10125;old_locus_tag=AL42_00896 NZ_KK316784.1 Protein Homology CDS 952151 953362 . + 0 ID=cds-WP_003404423.1;Parent=gene-AL42_RS10125;Dbxref=GenBank:WP_003404423.1;Name=WP_003404423.1;Ontology_term=GO:0016747;gbkey=CDS;gene=fadA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215374.1;locus_tag=AL42_RS10125;product=acetyl-CoA C-acetyltransferase;protein_id=WP_003404423.1;transl_table=11 NZ_KK316784.1 RefSeq gene 953367 955529 . + . ID=gene-AL42_RS10130;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=AL42_RS10130;old_locus_tag=AL42_00897 NZ_KK316784.1 Protein Homology CDS 953367 955529 . + 0 ID=cds-WP_003404426.1;Parent=gene-AL42_RS10130;Dbxref=GenBank:WP_003404426.1;Name=WP_003404426.1;gbkey=CDS;gene=fadB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215375.1;locus_tag=AL42_RS10130;product=fatty oxidation protein FadB;protein_id=WP_003404426.1;transl_table=11 NZ_KK316784.1 RefSeq gene 955597 957246 . - . ID=gene-AL42_RS10135;Name=AL42_RS10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10135;old_locus_tag=AL42_00898 NZ_KK316784.1 Protein Homology CDS 955597 957246 . - 0 ID=cds-WP_003913615.1;Parent=gene-AL42_RS10135;Dbxref=GenBank:WP_003913615.1;Name=WP_003913615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020729577.1;locus_tag=AL42_RS10135;product=DNA repair helicase XPB;protein_id=WP_003913615.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 957366 957460 . - . ID=gene-AL42_RS28095;Name=AL42_RS28095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS28095;partial=true;pseudo=true;start_range=.,957366 NZ_KK316784.1 Protein Homology CDS 957366 957460 . - 0 ID=cds-AL42_RS28095;Parent=gene-AL42_RS28095;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216909.1;locus_tag=AL42_RS28095;partial=true;product=sirohydrochlorin chelatase;pseudo=true;start_range=.,957366;transl_table=11 NZ_KK316784.1 RefSeq gene 957469 959739 . - . ID=gene-AL42_RS10140;Name=AL42_RS10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10140;old_locus_tag=AL42_00899 NZ_KK316784.1 Protein Homology CDS 957469 959739 . - 0 ID=cds-WP_003404512.1;Parent=gene-AL42_RS10140;Dbxref=GenBank:WP_003404512.1;Name=WP_003404512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215377.1;locus_tag=AL42_RS10140;product=helicase-associated domain-containing protein;protein_id=WP_003404512.1;transl_table=11 NZ_KK316784.1 RefSeq gene 959807 960007 . + . ID=gene-AL42_RS0104385;Name=AL42_RS0104385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0104385;old_locus_tag=AL42_00900 NZ_KK316784.1 Protein Homology CDS 959807 960007 . + 0 ID=cds-WP_003911329.1;Parent=gene-AL42_RS0104385;Dbxref=GenBank:WP_003911329.1;Name=WP_003911329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215378.2;locus_tag=AL42_RS0104385;product=hypothetical protein;protein_id=WP_003911329.1;transl_table=11 NZ_KK316784.1 RefSeq gene 960017 960520 . + . ID=gene-AL42_RS10145;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=AL42_RS10145;old_locus_tag=AL42_00901 NZ_KK316784.1 Protein Homology CDS 960017 960520 . + 0 ID=cds-WP_003404544.1;Parent=gene-AL42_RS10145;Dbxref=GenBank:WP_003404544.1;Name=WP_003404544.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215379.1;locus_tag=AL42_RS10145;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_003404544.1;transl_table=11 NZ_KK316784.1 RefSeq gene 960517 960999 . + . ID=gene-AL42_RS10150;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=AL42_RS10150;old_locus_tag=AL42_00902 NZ_KK316784.1 Protein Homology CDS 960517 960999 . + 0 ID=cds-WP_003404549.1;Parent=gene-AL42_RS10150;Dbxref=GenBank:WP_003404549.1;Name=WP_003404549.1;Ontology_term=GO:0006777,GO:0030151,GO:0046872;gbkey=CDS;gene=mog;go_function=molybdenum ion binding|0030151||IEA,metal ion binding|0046872||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215380.1;locus_tag=AL42_RS10150;product=MogA/MoaB family molybdenum cofactor biosynthesis protein;protein_id=WP_003404549.1;transl_table=11 NZ_KK316784.1 RefSeq gene 960996 961421 . + . ID=gene-AL42_RS10155;Name=moaE2;gbkey=Gene;gene=moaE2;gene_biotype=protein_coding;locus_tag=AL42_RS10155;old_locus_tag=AL42_00903 NZ_KK316784.1 Protein Homology CDS 960996 961421 . + 0 ID=cds-WP_003404552.1;Parent=gene-AL42_RS10155;Dbxref=GenBank:WP_003404552.1;Name=WP_003404552.1;gbkey=CDS;gene=moaE2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215381.1;locus_tag=AL42_RS10155;product=molybdopterin synthase subunit MoaE2;protein_id=WP_003404552.1;transl_table=11 NZ_KK316784.1 RefSeq gene 961439 962662 . - . ID=gene-AL42_RS10160;Name=rpfA;gbkey=Gene;gene=rpfA;gene_biotype=protein_coding;locus_tag=AL42_RS10160;old_locus_tag=AL42_00904 NZ_KK316784.1 Protein Homology CDS 961439 962662 . - 0 ID=cds-WP_003900223.1;Parent=gene-AL42_RS10160;Dbxref=GenBank:WP_003900223.1;Name=WP_003900223.1;gbkey=CDS;gene=rpfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215382.1;locus_tag=AL42_RS10160;product=resuscitation-promoting factor RpfA;protein_id=WP_003900223.1;transl_table=11 NZ_KK316784.1 cmsearch riboswitch 962672 962894 . - . ID=id-NZ_KK316784.1:962672..962894;Dbxref=RFAM:RF00379;Note=cyclic di-AMP (ydaO/yuaA leader) riboswitch senses the signaling molecule cyclic di-AMP;bound_moiety=cyclic di-AMP;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_KK316784.1 RefSeq gene 963110 963388 . - . ID=gene-AL42_RS10165;Name=moaD2;gbkey=Gene;gene=moaD2;gene_biotype=protein_coding;locus_tag=AL42_RS10165;old_locus_tag=AL42_00905 NZ_KK316784.1 Protein Homology CDS 963110 963388 . - 0 ID=cds-WP_003404559.1;Parent=gene-AL42_RS10165;Dbxref=GenBank:WP_003404559.1;Name=WP_003404559.1;gbkey=CDS;gene=moaD2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215383.1;locus_tag=AL42_RS10165;product=molybdopterin synthase subunit MoaD2;protein_id=WP_003404559.1;transl_table=11 NZ_KK316784.1 RefSeq gene 963392 964474 . - . ID=gene-AL42_RS10170;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=AL42_RS10170;old_locus_tag=AL42_00906 NZ_KK316784.1 Protein Homology CDS 963392 964474 . - 0 ID=cds-WP_003404564.1;Parent=gene-AL42_RS10170;Dbxref=GenBank:WP_003404564.1;Name=WP_003404564.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215384.1;locus_tag=AL42_RS10170;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_003404564.1;transl_table=11 NZ_KK316784.1 RefSeq gene 964471 964860 . - . ID=gene-AL42_RS10175;Name=AL42_RS10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10175;old_locus_tag=AL42_00907 NZ_KK316784.1 Protein Homology CDS 964471 964860 . - 0 ID=cds-WP_003404566.1;Parent=gene-AL42_RS10175;Dbxref=GenBank:WP_003404566.1;Name=WP_003404566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215385.1;locus_tag=AL42_RS10175;product=YccF domain-containing protein;protein_id=WP_003404566.1;transl_table=11 NZ_KK316784.1 RefSeq gene 965025 965432 . + . ID=gene-AL42_RS10180;Name=cspB;gbkey=Gene;gene=cspB;gene_biotype=protein_coding;locus_tag=AL42_RS10180;old_locus_tag=AL42_00908 NZ_KK316784.1 Protein Homology CDS 965025 965432 . + 0 ID=cds-WP_003404570.1;Parent=gene-AL42_RS10180;Dbxref=GenBank:WP_003404570.1;Name=WP_003404570.1;Ontology_term=GO:0003676;gbkey=CDS;gene=cspB;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215386.1;locus_tag=AL42_RS10180;product=cold-shock protein;protein_id=WP_003404570.1;transl_table=11 NZ_KK316784.1 RefSeq gene 965551 967380 . - . ID=gene-AL42_RS10185;Name=AL42_RS10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10185;old_locus_tag=AL42_00909 NZ_KK316784.1 Protein Homology CDS 965551 967380 . - 0 ID=cds-WP_009938284.1;Parent=gene-AL42_RS10185;Dbxref=GenBank:WP_009938284.1;Name=WP_009938284.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009938284.1;locus_tag=AL42_RS10185;product=PE family protein;protein_id=WP_009938284.1;transl_table=11 NZ_KK316784.1 RefSeq gene 967641 969593 . + . ID=gene-AL42_RS10190;Name=AL42_RS10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10190;old_locus_tag=AL42_00910 NZ_KK316784.1 Protein Homology CDS 967641 969593 . + 0 ID=cds-WP_003898626.1;Parent=gene-AL42_RS10190;Dbxref=GenBank:WP_003898626.1;Name=WP_003898626.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215388.1;locus_tag=AL42_RS10190;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003898626.1;transl_table=11 NZ_KK316784.1 RefSeq gene 969682 970842 . - . ID=gene-AL42_RS10195;Name=AL42_RS10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10195;old_locus_tag=AL42_00911 NZ_KK316784.1 Protein Homology CDS 969682 970842 . - 0 ID=cds-WP_003901031.1;Parent=gene-AL42_RS10195;Dbxref=GenBank:WP_003901031.1;Name=WP_003901031.1;Ontology_term=GO:0007165;gbkey=CDS;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215389.1;locus_tag=AL42_RS10195;product=FIST signal transduction protein;protein_id=WP_003901031.1;transl_table=11 NZ_KK316784.1 RefSeq gene 970942 971430 . - . ID=gene-AL42_RS10200;Name=AL42_RS10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10200;old_locus_tag=AL42_00912 NZ_KK316784.1 Protein Homology CDS 970942 971430 . - 0 ID=cds-WP_003404591.1;Parent=gene-AL42_RS10200;Dbxref=GenBank:WP_003404591.1;Name=WP_003404591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215390.1;locus_tag=AL42_RS10200;product=DUF2771 domain-containing protein;protein_id=WP_003404591.1;transl_table=11 NZ_KK316784.1 RefSeq gene 971427 973073 . - . ID=gene-AL42_RS10205;Name=AL42_RS10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10205;old_locus_tag=AL42_00913 NZ_KK316784.1 Protein Homology CDS 971427 973073 . - 0 ID=cds-WP_003900225.1;Parent=gene-AL42_RS10205;Dbxref=GenBank:WP_003900225.1;Name=WP_003900225.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215391.1;locus_tag=AL42_RS10205;product=MFS transporter;protein_id=WP_003900225.1;transl_table=11 NZ_KK316784.1 RefSeq gene 973211 973999 . + . ID=gene-AL42_RS10210;Name=AL42_RS10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10210;old_locus_tag=AL42_00914 NZ_KK316784.1 Protein Homology CDS 973211 973999 . + 0 ID=cds-WP_003404596.1;Parent=gene-AL42_RS10210;Dbxref=GenBank:WP_003404596.1;Name=WP_003404596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215392.1;locus_tag=AL42_RS10210;product=DUF3027 domain-containing protein;protein_id=WP_003404596.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 974008 975337 . - . ID=gene-AL42_RS0104390;Name=AL42_RS0104390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS0104390;old_locus_tag=AL42_00915;pseudo=true NZ_KK316784.1 Protein Homology CDS 974008 975337 . - 0 ID=cds-AL42_RS0104390;Parent=gene-AL42_RS0104390;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177764.1;locus_tag=AL42_RS0104390;product=PPE family protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 975615 975890 . - . ID=gene-AL42_RS10215;Name=AL42_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10215;old_locus_tag=AL42_00916 NZ_KK316784.1 Protein Homology CDS 975615 975890 . - 0 ID=cds-WP_003404603.1;Parent=gene-AL42_RS10215;Dbxref=GenBank:WP_003404603.1;Name=WP_003404603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215394.1;locus_tag=AL42_RS10215;product=DUF2530 domain-containing protein;protein_id=WP_003404603.1;transl_table=11 NZ_KK316784.1 RefSeq gene 976068 976499 . + . ID=gene-AL42_RS10220;Name=AL42_RS10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10220;old_locus_tag=AL42_00917 NZ_KK316784.1 Protein Homology CDS 976068 976499 . + 0 ID=cds-WP_003404606.1;Parent=gene-AL42_RS10220;Dbxref=GenBank:WP_003404606.1;Name=WP_003404606.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215395.1;locus_tag=AL42_RS10220;product=Rv0880 family HTH-type transcriptional regulator;protein_id=WP_003404606.1;transl_table=11 NZ_KK316784.1 RefSeq gene 976496 977362 . + . ID=gene-AL42_RS10225;Name=AL42_RS10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10225;old_locus_tag=AL42_00918 NZ_KK316784.1 Protein Homology CDS 976496 977362 . + 0 ID=cds-WP_003404610.1;Parent=gene-AL42_RS10225;Dbxref=GenBank:WP_003404610.1;Name=WP_003404610.1;Ontology_term=GO:0006396,GO:0032259,GO:0003723,GO:0008173,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA processing|0006396||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215396.1;locus_tag=AL42_RS10225;product=TrmH family RNA methyltransferase;protein_id=WP_003404610.1;transl_table=11 NZ_KK316784.1 RefSeq gene 977359 977643 . + . ID=gene-AL42_RS10230;Name=AL42_RS10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10230;old_locus_tag=AL42_00919 NZ_KK316784.1 Protein Homology CDS 977359 977643 . + 0 ID=cds-WP_003404614.1;Parent=gene-AL42_RS10230;Dbxref=GenBank:WP_003404614.1;Name=WP_003404614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215397.1;locus_tag=AL42_RS10230;product=DUF2537 domain-containing protein;protein_id=WP_003404614.1;transl_table=11 NZ_KK316784.1 RefSeq gene 977640 978401 . - . ID=gene-AL42_RS10235;Name=sepH;gbkey=Gene;gene=sepH;gene_biotype=protein_coding;locus_tag=AL42_RS10235;old_locus_tag=AL42_00920 NZ_KK316784.1 Protein Homology CDS 977640 978401 . - 0 ID=cds-WP_003404617.1;Parent=gene-AL42_RS10235;Dbxref=GenBank:WP_003404617.1;Name=WP_003404617.1;Ontology_term=GO:0051301;gbkey=CDS;gene=sepH;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215398.1;locus_tag=AL42_RS10235;product=septation protein SepH;protein_id=WP_003404617.1;transl_table=11 NZ_KK316784.1 RefSeq gene 978558 979688 . - . ID=gene-AL42_RS10240;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=AL42_RS10240;old_locus_tag=AL42_00921 NZ_KK316784.1 Protein Homology CDS 978558 979688 . - 0 ID=cds-WP_003404623.1;Parent=gene-AL42_RS10240;Dbxref=GenBank:WP_003404623.1;Name=WP_003404623.1;Ontology_term=GO:0006564,GO:0009058,GO:0004648;gbkey=CDS;gene=serC;go_function=O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215399.1;locus_tag=AL42_RS10240;product=phosphoserine transaminase;protein_id=WP_003404623.1;transl_table=11 NZ_KK316784.1 RefSeq gene 979896 980918 . + . ID=gene-AL42_RS10245;Name=AL42_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10245;old_locus_tag=AL42_00922 NZ_KK316784.1 Protein Homology CDS 979896 980918 . + 0 ID=cds-WP_003404627.1;Parent=gene-AL42_RS10245;Dbxref=GenBank:WP_003404627.1;Name=WP_003404627.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215400.1;locus_tag=AL42_RS10245;product=AurF N-oxygenase family protein;protein_id=WP_003404627.1;transl_table=11 NZ_KK316784.1 RefSeq gene 980937 982664 . + . ID=gene-AL42_RS10250;Name=fprB;gbkey=Gene;gene=fprB;gene_biotype=protein_coding;locus_tag=AL42_RS10250;old_locus_tag=AL42_00923 NZ_KK316784.1 Protein Homology CDS 980937 982664 . + 0 ID=cds-WP_003404631.1;Parent=gene-AL42_RS10250;Dbxref=GenBank:WP_003404631.1;Name=WP_003404631.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fprB;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215401.1;locus_tag=AL42_RS10250;product=FAD-dependent oxidoreductase;protein_id=WP_003404631.1;transl_table=11 NZ_KK316784.1 RefSeq gene 982647 983105 . - . ID=gene-AL42_RS10255;Name=AL42_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10255;old_locus_tag=AL42_00924 NZ_KK316784.1 Protein Homology CDS 982647 983105 . - 0 ID=cds-WP_003404633.1;Parent=gene-AL42_RS10255;Dbxref=GenBank:WP_003404633.1;Name=WP_003404633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215402.1;locus_tag=AL42_RS10255;product=VOC family protein;protein_id=WP_003404633.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 984367 985840 . + . ID=gene-AL42_RS0104400;Name=spmT;gbkey=Gene;gene=spmT;gene_biotype=pseudogene;locus_tag=AL42_RS0104400;old_locus_tag=AL42_00925;pseudo=true NZ_KK316784.1 Protein Homology CDS 984367 985840 . + 0 ID=cds-AL42_RS0104400;Parent=gene-AL42_RS0104400;Note=frameshifted;gbkey=CDS;gene=spmT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215403.1;locus_tag=AL42_RS0104400;product=sphingomyelinase;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 985875 986996 . - . ID=gene-AL42_RS10260;Name=citA;gbkey=Gene;gene=citA;gene_biotype=protein_coding;locus_tag=AL42_RS10260;old_locus_tag=AL42_00926 NZ_KK316784.1 Protein Homology CDS 985875 986996 . - 0 ID=cds-WP_003898633.1;Parent=gene-AL42_RS10260;Dbxref=GenBank:WP_003898633.1;Name=WP_003898633.1;gbkey=CDS;gene=citA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215404.1;locus_tag=AL42_RS10260;product=citrate synthase 2;protein_id=WP_003898633.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 987083 990347 . - . ID=gene-AL42_RS10265;Name=AL42_RS10265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS10265;old_locus_tag=AL42_00927;pseudo=true NZ_KK316784.1 Protein Homology CDS 987083 990347 . - 0 ID=cds-AL42_RS10265;Parent=gene-AL42_RS10265;Note=frameshifted;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015292513.1;locus_tag=AL42_RS10265;product=LuxR C-terminal-related transcriptional regulator;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 990988 992475 . + . ID=gene-AL42_RS10275;Name=AL42_RS10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10275;old_locus_tag=AL42_00929 NZ_KK316784.1 Protein Homology CDS 990988 992475 . + 0 ID=cds-WP_003404651.1;Parent=gene-AL42_RS10275;Dbxref=GenBank:WP_003404651.1;Name=WP_003404651.1;Ontology_term=GO:0004497,GO:0016709,GO:0050660;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215407.1;locus_tag=AL42_RS10275;product=flavin-containing monooxygenase;protein_id=WP_003404651.1;transl_table=11 NZ_KK316784.1 RefSeq gene 992453 993430 . - . ID=gene-AL42_RS10280;Name=AL42_RS10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10280;old_locus_tag=AL42_00930 NZ_KK316784.1 Protein Homology CDS 992453 993430 . - 0 ID=cds-WP_031721796.1;Parent=gene-AL42_RS10280;Dbxref=GenBank:WP_031721796.1;Name=WP_031721796.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215408.1;locus_tag=AL42_RS10280;product=class I SAM-dependent methyltransferase;protein_id=WP_031721796.1;transl_table=11 NZ_KK316784.1 RefSeq gene 993659 994840 . + . ID=gene-AL42_RS10285;Name=AL42_RS10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10285;old_locus_tag=AL42_00931 NZ_KK316784.1 Protein Homology CDS 993659 994840 . + 0 ID=cds-WP_003404660.1;Parent=gene-AL42_RS10285;Dbxref=GenBank:WP_003404660.1;Name=WP_003404660.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215409.1;locus_tag=AL42_RS10285;product=ATP-binding protein;protein_id=WP_003404660.1;transl_table=11 NZ_KK316784.1 RefSeq gene 994998 996434 . + . ID=gene-AL42_RS10290;Name=AL42_RS10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10290;old_locus_tag=AL42_00932 NZ_KK316784.1 Protein Homology CDS 994998 996434 . + 0 ID=cds-WP_003898635.1;Parent=gene-AL42_RS10290;Dbxref=GenBank:WP_003898635.1;Name=WP_003898635.1;Ontology_term=GO:0045017,GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;go_process=glycerolipid biosynthetic process|0045017||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898635.1;locus_tag=AL42_RS10290;product=WS/DGAT/MGAT family O-acyltransferase;protein_id=WP_003898635.1;transl_table=11 NZ_KK316784.1 RefSeq gene 996607 997902 . + . ID=gene-AL42_RS10295;Name=AL42_RS10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10295;old_locus_tag=AL42_00933 NZ_KK316784.1 Protein Homology CDS 996607 997902 . + 0 ID=cds-WP_003901040.1;Parent=gene-AL42_RS10295;Dbxref=GenBank:WP_003901040.1;Name=WP_003901040.1;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215411.1;locus_tag=AL42_RS10295;product=citrate synthase;protein_id=WP_003901040.1;transl_table=11 NZ_KK316784.1 RefSeq gene 997943 999550 . - . ID=gene-AL42_RS10300;Name=AL42_RS10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10300;old_locus_tag=AL42_00934 NZ_KK316784.1 Protein Homology CDS 997943 999550 . - 0 ID=cds-WP_003900230.1;Parent=gene-AL42_RS10300;Dbxref=GenBank:WP_003900230.1;Name=WP_003900230.1;Ontology_term=GO:0016116,GO:0016117,GO:0009055,GO:0016491;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA;go_process=carotenoid metabolic process|0016116||IEA,carotenoid biosynthetic process|0016117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215412.1;locus_tag=AL42_RS10300;product=phytoene desaturase family protein;protein_id=WP_003900230.1;transl_table=11 NZ_KK316784.1 RefSeq gene 999576 999839 . - . ID=gene-AL42_RS10305;Name=AL42_RS10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10305;old_locus_tag=AL42_00935 NZ_KK316784.1 Protein Homology CDS 999576 999839 . - 0 ID=cds-WP_003404673.1;Parent=gene-AL42_RS10305;Dbxref=GenBank:WP_003404673.1;Name=WP_003404673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215413.1;locus_tag=AL42_RS10305;product=DUF2630 family protein;protein_id=WP_003404673.1;transl_table=11 NZ_KK316784.1 RefSeq gene 999947 1000927 . + . ID=gene-AL42_RS10310;Name=arfA;gbkey=Gene;gene=arfA;gene_biotype=protein_coding;gene_synonym=ompATb;locus_tag=AL42_RS10310;old_locus_tag=AL42_00936 NZ_KK316784.1 Protein Homology CDS 999947 1000927 . + 0 ID=cds-WP_003404684.1;Parent=gene-AL42_RS10310;Dbxref=GenBank:WP_003404684.1;Name=WP_003404684.1;gbkey=CDS;gene=arfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215414.1;locus_tag=AL42_RS10310;product=channel-forming protein ArfA/OmpATb;protein_id=WP_003404684.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1000940 1001092 . + . ID=gene-AL42_RS10315;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=AL42_RS10315;old_locus_tag=AL42_00937 NZ_KK316784.1 Protein Homology CDS 1000940 1001092 . + 0 ID=cds-WP_003404687.1;Parent=gene-AL42_RS10315;Dbxref=GenBank:WP_003404687.1;Name=WP_003404687.1;gbkey=CDS;gene=arfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215415.1;locus_tag=AL42_RS10315;product=channel accessory protein ArfB;protein_id=WP_003404687.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1001092 1001619 . + . ID=gene-AL42_RS10320;Name=arfC;gbkey=Gene;gene=arfC;gene_biotype=protein_coding;locus_tag=AL42_RS10320;old_locus_tag=AL42_00938 NZ_KK316784.1 Protein Homology CDS 1001092 1001619 . + 0 ID=cds-WP_003404688.1;Parent=gene-AL42_RS10320;Dbxref=GenBank:WP_003404688.1;Name=WP_003404688.1;gbkey=CDS;gene=arfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215416.1;locus_tag=AL42_RS10320;product=channel accessory protein ArfC%2C sunset domain variant;protein_id=WP_003404688.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1001636 1002976 . - . ID=gene-AL42_RS10325;Name=prrB;gbkey=Gene;gene=prrB;gene_biotype=protein_coding;locus_tag=AL42_RS10325;old_locus_tag=AL42_00939 NZ_KK316784.1 Protein Homology CDS 1001636 1002976 . - 0 ID=cds-WP_003404689.1;Parent=gene-AL42_RS10325;Dbxref=GenBank:WP_003404689.1;Name=WP_003404689.1;gbkey=CDS;gene=prrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215417.1;locus_tag=AL42_RS10325;product=two-component system sensor histidine kinase PrrB;protein_id=WP_003404689.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1002987 1003697 . - . ID=gene-AL42_RS10330;Name=prrA;gbkey=Gene;gene=prrA;gene_biotype=protein_coding;locus_tag=AL42_RS10330;old_locus_tag=AL42_00940 NZ_KK316784.1 Protein Homology CDS 1002987 1003697 . - 0 ID=cds-WP_003404690.1;Parent=gene-AL42_RS10330;Dbxref=GenBank:WP_003404690.1;Name=WP_003404690.1;gbkey=CDS;gene=prrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215418.1;locus_tag=AL42_RS10330;product=two-component system response regulator PrrA;protein_id=WP_003404690.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1003828 1005315 . - . ID=gene-AL42_RS10335;Name=AL42_RS10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10335;old_locus_tag=AL42_00941 NZ_KK316784.1 Protein Homology CDS 1003828 1005315 . - 0 ID=cds-WP_003404691.1;Parent=gene-AL42_RS10335;Dbxref=GenBank:WP_003404691.1;Name=WP_003404691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215419.1;locus_tag=AL42_RS10335;product=carboxyl transferase domain-containing protein;protein_id=WP_003404691.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1005342 1006073 . + . ID=gene-AL42_RS10340;Name=AL42_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10340;old_locus_tag=AL42_00942 NZ_KK316784.1 Protein Homology CDS 1005342 1006073 . + 0 ID=cds-WP_003404702.1;Parent=gene-AL42_RS10340;Dbxref=GenBank:WP_003404702.1;Name=WP_003404702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215420.1;locus_tag=AL42_RS10340;product=enoyl-CoA hydratase;protein_id=WP_003404702.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1006079 1007197 . + . ID=gene-AL42_RS10345;Name=AL42_RS10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10345;old_locus_tag=AL42_00943 NZ_KK316784.1 Protein Homology CDS 1006079 1007197 . + 0 ID=cds-WP_003404705.1;Parent=gene-AL42_RS10345;Dbxref=GenBank:WP_003404705.1;Name=WP_003404705.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215421.1;locus_tag=AL42_RS10345;product=MBL fold metallo-hydrolase;protein_id=WP_003404705.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1007290 1008870 . + . ID=gene-AL42_RS10350;Name=AL42_RS10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10350;old_locus_tag=AL42_00944 NZ_KK316784.1 Protein Homology CDS 1007290 1008870 . + 0 ID=cds-WP_003910977.1;Parent=gene-AL42_RS10350;Dbxref=GenBank:WP_003910977.1;Name=WP_003910977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009975161.1;locus_tag=AL42_RS10350;product=serine hydrolase;protein_id=WP_003910977.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1008867 1011260 . + . ID=gene-AL42_RS10355;Name=ctpE;gbkey=Gene;gene=ctpE;gene_biotype=protein_coding;locus_tag=AL42_RS10355;old_locus_tag=AL42_00945 NZ_KK316784.1 Protein Homology CDS 1008867 1011260 . + 0 ID=cds-WP_003898639.1;Parent=gene-AL42_RS10355;Dbxref=GenBank:WP_003898639.1;Name=WP_003898639.1;Ontology_term=GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;gene=ctpE;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215423.1;locus_tag=AL42_RS10355;product=cation-translocating P-type ATPase;protein_id=WP_003898639.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1011533 1011691 . + . ID=gene-AL42_RS27120;Name=AL42_RS27120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27120 NZ_KK316784.1 Protein Homology CDS 1011533 1011691 . + 0 ID=cds-WP_003404720.1;Parent=gene-AL42_RS27120;Dbxref=GenBank:WP_003404720.1;Name=WP_003404720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003404720.1;locus_tag=AL42_RS27120;product=hypothetical protein;protein_id=WP_003404720.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1011817 1011996 . + . ID=gene-AL42_RS10360;Name=AL42_RS10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10360;old_locus_tag=AL42_00946 NZ_KK316784.1 Protein Homology CDS 1011817 1011996 . + 0 ID=cds-WP_003898641.1;Parent=gene-AL42_RS10360;Dbxref=GenBank:WP_003898641.1;Name=WP_003898641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215424.1;locus_tag=AL42_RS10360;product=antitoxin;protein_id=WP_003898641.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1012002 1012436 . + . ID=gene-AL42_RS10365;Name=AL42_RS10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10365;old_locus_tag=AL42_00947 NZ_KK316784.1 Protein Homology CDS 1012002 1012436 . + 0 ID=cds-WP_003404726.1;Parent=gene-AL42_RS10365;Dbxref=GenBank:WP_003404726.1;Name=WP_003404726.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215425.1;locus_tag=AL42_RS10365;product=type II toxin-antitoxin system Rv0910 family toxin;protein_id=WP_003404726.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1012534 1013307 . + . ID=gene-AL42_RS10370;Name=AL42_RS10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10370;old_locus_tag=AL42_00948 NZ_KK316784.1 Protein Homology CDS 1012534 1013307 . + 0 ID=cds-WP_003404735.1;Parent=gene-AL42_RS10370;Dbxref=GenBank:WP_003404735.1;Name=WP_003404735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215426.1;locus_tag=AL42_RS10370;product=VOC family protein;protein_id=WP_003404735.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1013372 1013821 . + . ID=gene-AL42_RS10375;Name=AL42_RS10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10375;old_locus_tag=AL42_00949 NZ_KK316784.1 Protein Homology CDS 1013372 1013821 . + 0 ID=cds-WP_003404738.1;Parent=gene-AL42_RS10375;Dbxref=GenBank:WP_003404738.1;Name=WP_003404738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215427.1;locus_tag=AL42_RS10375;product=hypothetical protein;protein_id=WP_003404738.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1013956 1014186 . - . ID=gene-AL42_RS0104415;Name=AL42_RS0104415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0104415 NZ_KK316784.1 Protein Homology CDS 1013956 1014186 . - 0 ID=cds-WP_003898642.1;Parent=gene-AL42_RS0104415;Dbxref=GenBank:WP_003898642.1;Name=WP_003898642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003404739.1;locus_tag=AL42_RS0104415;product=hypothetical protein;protein_id=WP_003898642.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1014353 1015861 . - . ID=gene-AL42_RS10380;Name=AL42_RS10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10380;old_locus_tag=AL42_00950 NZ_KK316784.1 Protein Homology CDS 1014353 1015861 . - 0 ID=cds-WP_003404742.1;Parent=gene-AL42_RS10380;Dbxref=GenBank:WP_003404742.1;Name=WP_003404742.1;Ontology_term=GO:0006720,GO:0016702,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of two atoms of oxygen|0016702||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid metabolic process|0006720||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215428.1;locus_tag=AL42_RS10380;product=carotenoid oxygenase family protein;protein_id=WP_003404742.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1015863 1017101 . - . ID=gene-AL42_RS10385;Name=AL42_RS10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10385;old_locus_tag=AL42_00951 NZ_KK316784.1 Protein Homology CDS 1015863 1017101 . - 0 ID=cds-WP_031721797.1;Parent=gene-AL42_RS10385;Dbxref=GenBank:WP_031721797.1;Name=WP_031721797.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215429.1;locus_tag=AL42_RS10385;product=acetyl-CoA acetyltransferase;protein_id=WP_031721797.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1017194 1018465 . - . ID=gene-AL42_RS10390;Name=AL42_RS10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10390;old_locus_tag=AL42_00952 NZ_KK316784.1 Protein Homology CDS 1017194 1018465 . - 0 ID=cds-WP_003404747.1;Parent=gene-AL42_RS10390;Dbxref=GenBank:WP_003404747.1;Name=WP_003404747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177765.1;locus_tag=AL42_RS10390;product=PPE family protein;protein_id=WP_003404747.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1018480 1018779 . - . ID=gene-AL42_RS10395;Name=AL42_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10395;old_locus_tag=AL42_00953 NZ_KK316784.1 Protein Homology CDS 1018480 1018779 . - 0 ID=cds-WP_003404748.1;Parent=gene-AL42_RS10395;Dbxref=GenBank:WP_003404748.1;Name=WP_003404748.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177766.1;locus_tag=AL42_RS10395;product=PE family protein;protein_id=WP_003404748.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1019223 1021004 . + . ID=gene-AL42_RS10400;Name=betP;gbkey=Gene;gene=betP;gene_biotype=protein_coding;locus_tag=AL42_RS10400;old_locus_tag=AL42_00954 NZ_KK316784.1 Protein Homology CDS 1019223 1021004 . + 0 ID=cds-WP_003404749.1;Parent=gene-AL42_RS10400;Dbxref=GenBank:WP_003404749.1;Name=WP_003404749.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;gene=betP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215432.1;locus_tag=AL42_RS10400;product=BCCT family transporter;protein_id=WP_003404749.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1021001 1021258 . + . ID=gene-AL42_RS0104420;Name=AL42_RS0104420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0104420 NZ_KK316784.1 Protein Homology CDS 1021001 1021258 . + 0 ID=cds-WP_003404750.1;Parent=gene-AL42_RS0104420;Dbxref=GenBank:WP_003404750.1;Name=WP_003404750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003404750.1;locus_tag=AL42_RS0104420;product=hypothetical protein;protein_id=WP_003404750.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1021347 1021823 . + . ID=gene-AL42_RS10405;Name=AL42_RS10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10405;old_locus_tag=AL42_00955 NZ_KK316784.1 Protein Homology CDS 1021347 1021823 . + 0 ID=cds-WP_003404754.1;Parent=gene-AL42_RS10405;Dbxref=GenBank:WP_003404754.1;Name=WP_003404754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215433.1;locus_tag=AL42_RS10405;product=type II toxin-antitoxin system TacA family antitoxin;protein_id=WP_003404754.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1021820 1022320 . + . ID=gene-AL42_RS10410;Name=AL42_RS10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10410;old_locus_tag=AL42_00956 NZ_KK316784.1 Protein Homology CDS 1021820 1022320 . + 0 ID=cds-WP_003404756.1;Parent=gene-AL42_RS10410;Dbxref=GenBank:WP_003404756.1;Name=WP_003404756.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215434.1;locus_tag=AL42_RS10410;product=GNAT family N-acetyltransferase;protein_id=WP_003404756.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1022457 1022529 . - . ID=gene-AL42_RS10415;Name=AL42_RS10415;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL42_RS10415;old_locus_tag=AL42_00957 NZ_KK316784.1 tRNAscan-SE tRNA 1022457 1022529 . - . ID=rna-AL42_RS10415;Parent=gene-AL42_RS10415;anticodon=(pos:complement(1022494..1022496));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS10415;product=tRNA-Arg NZ_KK316784.1 tRNAscan-SE exon 1022457 1022529 . - . ID=exon-AL42_RS10415-1;Parent=rna-AL42_RS10415;anticodon=(pos:complement(1022494..1022496));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS10415;product=tRNA-Arg NZ_KK316784.1 RefSeq gene 1022633 1023952 . - . ID=gene-AL42_RS10420;Name=AL42_RS10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10420;old_locus_tag=AL42_00958 NZ_KK316784.1 Protein Homology CDS 1022633 1023952 . - 0 ID=cds-WP_003404757.1;Parent=gene-AL42_RS10420;Dbxref=GenBank:WP_003404757.1;Name=WP_003404757.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215435.1;locus_tag=AL42_RS10420;product=IS256-like element IS1554 family transposase;protein_id=WP_003404757.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1024240 1024821 . + . ID=gene-AL42_RS10425;Name=AL42_RS10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10425;old_locus_tag=AL42_00959 NZ_KK316784.1 Protein Homology CDS 1024240 1024821 . + 0 ID=cds-WP_003404760.1;Parent=gene-AL42_RS10425;Dbxref=GenBank:WP_003404760.1;Name=WP_003404760.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215436.1;locus_tag=AL42_RS10425;product=IS607-like element IS1535 family transposase;protein_id=WP_003404760.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1024821 1026473 . + . ID=gene-AL42_RS10430;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AL42_RS10430;old_locus_tag=AL42_00960 NZ_KK316784.1 Protein Homology CDS 1024821 1026473 . + 0 ID=cds-WP_003905412.1;Parent=gene-AL42_RS10430;Dbxref=GenBank:WP_003905412.1;Name=WP_003905412.1;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215437.1;locus_tag=AL42_RS10430;product=IS607 family element RNA-guided endonuclease TnpB;protein_id=WP_003905412.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1026649 1027713 . - . ID=gene-AL42_RS10435;Name=AL42_RS10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10435;old_locus_tag=AL42_00961 NZ_KK316784.1 Protein Homology CDS 1026649 1027713 . - 0 ID=cds-WP_003898648.1;Parent=gene-AL42_RS10435;Dbxref=GenBank:WP_003898648.1;Name=WP_003898648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215438.1;locus_tag=AL42_RS10435;product=poly-gamma-glutamate hydrolase family protein;protein_id=WP_003898648.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1027714 1029000 . - . ID=gene-AL42_RS10440;Name=mntH;gbkey=Gene;gene=mntH;gene_biotype=protein_coding;locus_tag=AL42_RS10440;old_locus_tag=AL42_00962 NZ_KK316784.1 Protein Homology CDS 1027714 1029000 . - 0 ID=cds-WP_003898649.1;Parent=gene-AL42_RS10440;Dbxref=GenBank:WP_003898649.1;Name=WP_003898649.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mntH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177767.1;locus_tag=AL42_RS10440;product=Nramp family divalent metal transporter;protein_id=WP_003898649.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1029032 1029769 . - . ID=gene-AL42_RS10445;Name=AL42_RS10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10445;old_locus_tag=AL42_00963 NZ_KK316784.1 Protein Homology CDS 1029032 1029769 . - 0 ID=cds-WP_003404764.1;Parent=gene-AL42_RS10445;Dbxref=GenBank:WP_003404764.1;Name=WP_003404764.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215440.1;locus_tag=AL42_RS10445;product=flavodoxin family protein;protein_id=WP_003404764.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1029846 1030922 . - . ID=gene-AL42_RS10450;Name=AL42_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10450;old_locus_tag=AL42_00964 NZ_KK316784.1 Protein Homology CDS 1029846 1030922 . - 0 ID=cds-WP_003404767.1;Parent=gene-AL42_RS10450;Dbxref=GenBank:WP_003404767.1;Name=WP_003404767.1;Ontology_term=GO:0016638;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors|0016638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215441.1;locus_tag=AL42_RS10450;product=NAD(P)H-dependent amine dehydrogenase family protein;protein_id=WP_003404767.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1030976 1031764 . - . ID=gene-AL42_RS10455;Name=AL42_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10455;old_locus_tag=AL42_00965 NZ_KK316784.1 Protein Homology CDS 1030976 1031764 . - 0 ID=cds-WP_003901945.1;Parent=gene-AL42_RS10455;Dbxref=GenBank:WP_003901945.1;Name=WP_003901945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215442.1;locus_tag=AL42_RS10455;product=SDR family oxidoreductase;protein_id=WP_003901945.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1032036 1033148 . + . ID=gene-AL42_RS10460;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=AL42_RS10460;old_locus_tag=AL42_00966 NZ_KK316784.1 Protein Homology CDS 1032036 1033148 . + 0 ID=cds-WP_003404775.1;Parent=gene-AL42_RS10460;Dbxref=GenBank:WP_003404775.1;Name=WP_003404775.1;Ontology_term=GO:0006817,GO:0035435,GO:0015415,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA,phosphate ion binding|0042301||IEA;go_process=phosphate ion transport|0006817||IEA,phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177768.1;locus_tag=AL42_RS10460;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_003404775.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1033161 1034135 . + . ID=gene-AL42_RS10465;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=AL42_RS10465;old_locus_tag=AL42_00967 NZ_KK316784.1 Protein Homology CDS 1033161 1034135 . + 0 ID=cds-WP_003404779.1;Parent=gene-AL42_RS10465;Dbxref=GenBank:WP_003404779.1;Name=WP_003404779.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215444.1;locus_tag=AL42_RS10465;product=phosphate ABC transporter permease subunit PstC;protein_id=WP_003404779.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1034132 1035046 . + . ID=gene-AL42_RS10470;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=AL42_RS10470;old_locus_tag=AL42_00968 NZ_KK316784.1 Protein Homology CDS 1034132 1035046 . + 0 ID=cds-WP_003898651.1;Parent=gene-AL42_RS10470;Dbxref=GenBank:WP_003898651.1;Name=WP_003898651.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898651.1;locus_tag=AL42_RS10470;product=phosphate ABC transporter permease PstA;protein_id=WP_003898651.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1035053 1037047 . - . ID=gene-AL42_RS10475;Name=pknD;gbkey=Gene;gene=pknD;gene_biotype=protein_coding;locus_tag=AL42_RS10475;old_locus_tag=AL42_00969 NZ_KK316784.1 Protein Homology CDS 1035053 1037047 . - 0 ID=cds-WP_003404782.1;Parent=gene-AL42_RS10475;Dbxref=GenBank:WP_003404782.1;Name=WP_003404782.1;gbkey=CDS;gene=pknD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215446.1;locus_tag=AL42_RS10475;product=serine/threonine protein kinase PknD;protein_id=WP_003404782.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1037069 1038181 . - . ID=gene-AL42_RS10480;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=AL42_RS10480;old_locus_tag=AL42_00970 NZ_KK316784.1 Protein Homology CDS 1037069 1038181 . - 0 ID=cds-WP_003898652.1;Parent=gene-AL42_RS10480;Dbxref=GenBank:WP_003898652.1;Name=WP_003898652.1;Ontology_term=GO:0006817,GO:0035435,GO:0015415,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA,phosphate ion binding|0042301||IEA;go_process=phosphate ion transport|0006817||IEA,phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177769.1;locus_tag=AL42_RS10480;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_003898652.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1038397 1039227 . + . ID=gene-AL42_RS10485;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=AL42_RS10485;old_locus_tag=AL42_00971 NZ_KK316784.1 Protein Homology CDS 1038397 1039227 . + 0 ID=cds-WP_003898653.1;Parent=gene-AL42_RS10485;Dbxref=GenBank:WP_003898653.1;Name=WP_003898653.1;gbkey=CDS;gene=pstB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215448.1;locus_tag=AL42_RS10485;product=phosphate ABC transporter ATP-binding protein;protein_id=WP_003898653.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1039248 1040372 . + . ID=gene-AL42_RS10490;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=AL42_RS10490;old_locus_tag=AL42_00972 NZ_KK316784.1 Protein Homology CDS 1039248 1040372 . + 0 ID=cds-WP_003900236.1;Parent=gene-AL42_RS10490;Dbxref=GenBank:WP_003900236.1;Name=WP_003900236.1;Ontology_term=GO:0006817,GO:0035435,GO:0015415,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA,phosphate ion binding|0042301||IEA;go_process=phosphate ion transport|0006817||IEA,phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177770.1;locus_tag=AL42_RS10490;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_003900236.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1040432 1041448 . + . ID=gene-AL42_RS10495;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=AL42_RS10495;old_locus_tag=AL42_00973 NZ_KK316784.1 Protein Homology CDS 1040432 1041448 . + 0 ID=cds-WP_003404792.1;Parent=gene-AL42_RS10495;Dbxref=GenBank:WP_003404792.1;Name=WP_003404792.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177771.1;locus_tag=AL42_RS10495;product=phosphate ABC transporter permease subunit PstC;protein_id=WP_003404792.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1041450 1042355 . + . ID=gene-AL42_RS10500;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=AL42_RS10500;old_locus_tag=AL42_00974 NZ_KK316784.1 Protein Homology CDS 1041450 1042355 . + 0 ID=cds-WP_003404794.1;Parent=gene-AL42_RS10500;Dbxref=GenBank:WP_003404794.1;Name=WP_003404794.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215451.1;locus_tag=AL42_RS10500;product=phosphate ABC transporter permease PstA;protein_id=WP_003404794.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1042332 1043153 . - . ID=gene-AL42_RS10505;Name=mku;gbkey=Gene;gene=mku;gene_biotype=protein_coding;locus_tag=AL42_RS10505;old_locus_tag=AL42_00975 NZ_KK316784.1 Protein Homology CDS 1042332 1043153 . - 0 ID=cds-WP_003404795.1;Parent=gene-AL42_RS10505;Dbxref=GenBank:WP_003404795.1;Name=WP_003404795.1;Ontology_term=GO:0006303,GO:0045027;gbkey=CDS;gene=mku;go_function=DNA end binding|0045027||IEA;go_process=double-strand break repair via nonhomologous end joining|0006303||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215452.1;locus_tag=AL42_RS10505;product=non-homologous end joining protein Ku;protein_id=WP_003404795.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1043269 1045548 . + . ID=gene-AL42_RS10510;Name=ligD;gbkey=Gene;gene=ligD;gene_biotype=protein_coding;locus_tag=AL42_RS10510;old_locus_tag=AL42_00976 NZ_KK316784.1 Protein Homology CDS 1043269 1045548 . + 0 ID=cds-WP_003898655.1;Parent=gene-AL42_RS10510;Dbxref=GenBank:WP_003898655.1;Name=WP_003898655.1;Ontology_term=GO:0006281,GO:0006310,GO:0003910;gbkey=CDS;gene=ligD;go_function=DNA ligase (ATP) activity|0003910||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215453.1;locus_tag=AL42_RS10510;product=ATP-dependent DNA ligase;protein_id=WP_003898655.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1045545 1047479 . + . ID=gene-AL42_RS10515;Name=AL42_RS10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10515;old_locus_tag=AL42_00977 NZ_KK316784.1 Protein Homology CDS 1045545 1047479 . + 0 ID=cds-WP_003404801.1;Parent=gene-AL42_RS10515;Dbxref=GenBank:WP_003404801.1;Name=WP_003404801.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215454.1;locus_tag=AL42_RS10515;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_003404801.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1047726 1048592 . - . ID=gene-AL42_RS10520;Name=AL42_RS10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10520;old_locus_tag=AL42_00978 NZ_KK316784.1 Protein Homology CDS 1047726 1048592 . - 0 ID=cds-WP_003404819.1;Parent=gene-AL42_RS10520;Dbxref=GenBank:WP_003404819.1;Name=WP_003404819.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215455.1;locus_tag=AL42_RS10520;product=TIGR03619 family F420-dependent LLM class oxidoreductase;protein_id=WP_003404819.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1048677 1049450 . - . ID=gene-AL42_RS10525;Name=AL42_RS10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10525;old_locus_tag=AL42_00979 NZ_KK316784.1 Protein Homology CDS 1048677 1049450 . - 0 ID=cds-WP_003404823.1;Parent=gene-AL42_RS10525;Dbxref=GenBank:WP_003404823.1;Name=WP_003404823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215456.1;locus_tag=AL42_RS10525;product=STAS domain-containing protein;protein_id=WP_003404823.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1049493 1049771 . + . ID=gene-AL42_RS10530;Name=AL42_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10530;old_locus_tag=AL42_00980 NZ_KK316784.1 Protein Homology CDS 1049493 1049771 . + 0 ID=cds-WP_003901948.1;Parent=gene-AL42_RS10530;Dbxref=GenBank:WP_003901948.1;Name=WP_003901948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215457.1;locus_tag=AL42_RS10530;product=DUF8092 domain-containing protein;protein_id=WP_003901948.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1049829 1050869 . - . ID=gene-AL42_RS10535;Name=AL42_RS10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10535;old_locus_tag=AL42_00981 NZ_KK316784.1 Protein Homology CDS 1049829 1050869 . - 0 ID=cds-WP_003898656.1;Parent=gene-AL42_RS10535;Dbxref=GenBank:WP_003898656.1;Name=WP_003898656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215458.1;locus_tag=AL42_RS10535;product=DUF4873 domain-containing protein;protein_id=WP_003898656.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1050898 1051374 . + . ID=gene-AL42_RS10540;Name=AL42_RS10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10540;old_locus_tag=AL42_00982 NZ_KK316784.1 Protein Homology CDS 1050898 1051374 . + 0 ID=cds-WP_003404828.1;Parent=gene-AL42_RS10540;Dbxref=GenBank:WP_003404828.1;Name=WP_003404828.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215459.1;locus_tag=AL42_RS10540;product=zinc finger domain-containing protein;protein_id=WP_003404828.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1051392 1052141 . + . ID=gene-AL42_RS10545;Name=AL42_RS10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10545;old_locus_tag=AL42_00983 NZ_KK316784.1 Protein Homology CDS 1051392 1052141 . + 0 ID=cds-WP_003918158.1;Parent=gene-AL42_RS10545;Dbxref=GenBank:WP_003918158.1;Name=WP_003918158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007777012.1;locus_tag=AL42_RS10545;product=SDR family oxidoreductase;protein_id=WP_003918158.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1052157 1053818 . - . ID=gene-AL42_RS10550;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=AL42_RS10550;old_locus_tag=AL42_00984 NZ_KK316784.1 Protein Homology CDS 1052157 1053818 . - 0 ID=cds-WP_003404830.1;Parent=gene-AL42_RS10550;Dbxref=GenBank:WP_003404830.1;Name=WP_003404830.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215461.1;locus_tag=AL42_RS10550;product=glucose-6-phosphate isomerase;protein_id=WP_003404830.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1054433 1054663 . - . ID=gene-AL42_RS27495;Name=AL42_RS27495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27495 NZ_KK316784.1 Protein Homology CDS 1054433 1054663 . - 0 ID=cds-WP_003404833.1;Parent=gene-AL42_RS27495;Dbxref=GenBank:WP_003404833.1;Name=WP_003404833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003404833.1;locus_tag=AL42_RS27495;product=mycolyltransferase;protein_id=WP_003404833.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1054580 1054774 . + . ID=gene-AL42_RS0104435;Name=AL42_RS0104435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0104435 NZ_KK316784.1 Protein Homology CDS 1054580 1054774 . + 0 ID=cds-WP_003404835.1;Parent=gene-AL42_RS0104435;Dbxref=GenBank:WP_003404835.1;Name=WP_003404835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003404835.1;locus_tag=AL42_RS0104435;product=hypothetical protein;protein_id=WP_003404835.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1054779 1055096 . - . ID=gene-AL42_RS10555;Name=AL42_RS10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10555;old_locus_tag=AL42_00985 NZ_KK316784.1 Protein Homology CDS 1054779 1055096 . - 0 ID=cds-WP_003404838.1;Parent=gene-AL42_RS10555;Dbxref=GenBank:WP_003404838.1;Name=WP_003404838.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215463.1;locus_tag=AL42_RS10555;product=chorismate mutase;protein_id=WP_003404838.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1055393 1057708 . + . ID=gene-AL42_RS10560;Name=pcrA;gbkey=Gene;gene=pcrA;gene_biotype=protein_coding;locus_tag=AL42_RS10560;old_locus_tag=AL42_00986 NZ_KK316784.1 Protein Homology CDS 1055393 1057708 . + 0 ID=cds-WP_003404859.1;Parent=gene-AL42_RS10560;Dbxref=GenBank:WP_003404859.1;Name=WP_003404859.1;Ontology_term=GO:0006260,GO:0006281,GO:0003678,GO:0005737;gbkey=CDS;gene=pcrA;go_component=cytoplasm|0005737||IEA;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177772.1;locus_tag=AL42_RS10560;product=DNA helicase PcrA;protein_id=WP_003404859.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1057789 1058787 . - . ID=gene-AL42_RS10565;Name=AL42_RS10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10565;old_locus_tag=AL42_00987 NZ_KK316784.1 Protein Homology CDS 1057789 1058787 . - 0 ID=cds-WP_003404862.1;Parent=gene-AL42_RS10565;Dbxref=GenBank:WP_003404862.1;Name=WP_003404862.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215465.1;locus_tag=AL42_RS10565;product=M23 family metallopeptidase;protein_id=WP_003404862.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1059097 1060260 . + . ID=gene-AL42_RS10570;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=AL42_RS10570;old_locus_tag=AL42_00988 NZ_KK316784.1 Protein Homology CDS 1059097 1060260 . + 0 ID=cds-WP_003898659.1;Parent=gene-AL42_RS10570;Dbxref=GenBank:WP_003898659.1;Name=WP_003898659.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215466.1;locus_tag=AL42_RS10570;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_003898659.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1060282 1061184 . + . ID=gene-AL42_RS10575;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=AL42_RS10575;old_locus_tag=AL42_00989 NZ_KK316784.1 Protein Homology CDS 1060282 1061184 . + 0 ID=cds-WP_009935735.1;Parent=gene-AL42_RS10575;Dbxref=GenBank:WP_009935735.1;Name=WP_009935735.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007776997.1;locus_tag=AL42_RS10575;product=succinate--CoA ligase subunit alpha;protein_id=WP_009935735.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1061247 1062095 . - . ID=gene-AL42_RS10580;Name=AL42_RS10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10580;old_locus_tag=AL42_00990 NZ_KK316784.1 Protein Homology CDS 1061247 1062095 . - 0 ID=cds-WP_003404873.1;Parent=gene-AL42_RS10580;Dbxref=GenBank:WP_003404873.1;Name=WP_003404873.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215468.1;locus_tag=AL42_RS10580;product=LLM class F420-dependent oxidoreductase;protein_id=WP_003404873.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1062260 1063171 . + . ID=gene-AL42_RS10585;Name=AL42_RS10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10585;old_locus_tag=AL42_00991 NZ_KK316784.1 Protein Homology CDS 1062260 1063171 . + 0 ID=cds-WP_003404875.1;Parent=gene-AL42_RS10585;Dbxref=GenBank:WP_003404875.1;Name=WP_003404875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215469.1;locus_tag=AL42_RS10585;product=DUF5336 domain-containing protein;protein_id=WP_003404875.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1063211 1064578 . + . ID=gene-AL42_RS10590;Name=AL42_RS10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10590;old_locus_tag=AL42_00992 NZ_KK316784.1 Protein Homology CDS 1063211 1064578 . + 0 ID=cds-WP_003901049.1;Parent=gene-AL42_RS10590;Dbxref=GenBank:WP_003901049.1;Name=WP_003901049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215470.1;locus_tag=AL42_RS10590;product=cell division protein PerM;protein_id=WP_003901049.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1064694 1065341 . + . ID=gene-AL42_RS10595;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=AL42_RS10595;old_locus_tag=AL42_00993 NZ_KK316784.1 Protein Homology CDS 1064694 1065341 . + 0 ID=cds-WP_003898661.1;Parent=gene-AL42_RS10595;Dbxref=GenBank:WP_003898661.1;Name=WP_003898661.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215471.1;locus_tag=AL42_RS10595;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_003898661.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1065338 1066909 . + . ID=gene-AL42_RS10600;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=AL42_RS10600;old_locus_tag=AL42_00994 NZ_KK316784.1 Protein Homology CDS 1065338 1066909 . + 0 ID=cds-WP_003404890.1;Parent=gene-AL42_RS10600;Dbxref=GenBank:WP_003404890.1;Name=WP_003404890.1;Ontology_term=GO:0006164,GO:0006189,GO:0003824,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=catalytic activity|0003824||IEA,IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA,'de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215472.1;locus_tag=AL42_RS10600;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_003404890.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1067016 1068395 . + . ID=gene-AL42_RS10605;Name=AL42_RS10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10605;old_locus_tag=AL42_00995 NZ_KK316784.1 Protein Homology CDS 1067016 1068395 . + 0 ID=cds-WP_003404892.1;Parent=gene-AL42_RS10605;Dbxref=GenBank:WP_003404892.1;Name=WP_003404892.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215473.1;locus_tag=AL42_RS10605;product=sigma 54-interacting transcriptional regulator;protein_id=WP_003404892.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1068388 1070406 . + . ID=gene-AL42_RS10610;Name=AL42_RS10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10610;old_locus_tag=AL42_00996 NZ_KK316784.1 Protein Homology CDS 1068388 1070406 . + 0 ID=cds-WP_003901955.1;Parent=gene-AL42_RS10610;Dbxref=GenBank:WP_003901955.1;Name=WP_003901955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215474.1;locus_tag=AL42_RS10610;product=vWA domain-containing protein;protein_id=WP_003901955.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1070460 1070681 . + . ID=gene-AL42_RS10615;Name=AL42_RS10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10615;old_locus_tag=AL42_00997 NZ_KK316784.1 Protein Homology CDS 1070460 1070681 . + 0 ID=cds-WP_003404898.1;Parent=gene-AL42_RS10615;Dbxref=GenBank:WP_003404898.1;Name=WP_003404898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007409620.1;locus_tag=AL42_RS10615;product=antitoxin VapB9;protein_id=WP_003404898.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1070678 1071061 . + . ID=gene-AL42_RS10620;Name=AL42_RS10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10620;old_locus_tag=AL42_00998 NZ_KK316784.1 Protein Homology CDS 1070678 1071061 . + 0 ID=cds-WP_003404903.1;Parent=gene-AL42_RS10620;Dbxref=GenBank:WP_003404903.1;Name=WP_003404903.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215475.1;locus_tag=AL42_RS10620;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003404903.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1071207 1071554 . + . ID=gene-AL42_RS10625;Name=AL42_RS10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10625;old_locus_tag=AL42_00999 NZ_KK316784.1 Protein Homology CDS 1071207 1071554 . + 0 ID=cds-WP_003404907.1;Parent=gene-AL42_RS10625;Dbxref=GenBank:WP_003404907.1;Name=WP_003404907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215476.1;locus_tag=AL42_RS10625;product=hypothetical protein;protein_id=WP_003404907.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1071573 1072247 . - . ID=gene-AL42_RS10630;Name=lprP;gbkey=Gene;gene=lprP;gene_biotype=protein_coding;locus_tag=AL42_RS10630;old_locus_tag=AL42_01000 NZ_KK316784.1 Protein Homology CDS 1071573 1072247 . - 0 ID=cds-WP_003898662.1;Parent=gene-AL42_RS10630;Dbxref=GenBank:WP_003898662.1;Name=WP_003898662.1;gbkey=CDS;gene=lprP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215477.1;locus_tag=AL42_RS10630;product=LppA family lipoprotein;protein_id=WP_003898662.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1072244 1072384 . - . ID=gene-AL42_RS27500;Name=AL42_RS27500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27500 NZ_KK316784.1 Protein Homology CDS 1072244 1072384 . - 0 ID=cds-WP_003404912.1;Parent=gene-AL42_RS27500;Dbxref=GenBank:WP_003404912.1;Name=WP_003404912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003404912.1;locus_tag=AL42_RS27500;product=hypothetical protein;protein_id=WP_003404912.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1072430 1073383 . - . ID=gene-AL42_RS27505;Name=AL42_RS27505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27505;old_locus_tag=AL42_01001 NZ_KK316784.1 Protein Homology CDS 1072430 1073383 . - 0 ID=cds-WP_003914276.1;Parent=gene-AL42_RS27505;Dbxref=GenBank:WP_003914276.1;Name=WP_003914276.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018018.6;locus_tag=AL42_RS27505;product=alpha/beta hydrolase family protein;protein_id=WP_003914276.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1073405 1073551 . + . ID=gene-AL42_RS27510;Name=AL42_RS27510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27510 NZ_KK316784.1 Protein Homology CDS 1073405 1073551 . + 0 ID=cds-WP_009937438.1;Parent=gene-AL42_RS27510;Dbxref=GenBank:WP_009937438.1;Name=WP_009937438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009937438.1;locus_tag=AL42_RS27510;product=hypothetical protein;protein_id=WP_009937438.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1073911 1074330 . - . ID=gene-AL42_RS10645;Name=AL42_RS10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10645;old_locus_tag=AL42_01003 NZ_KK316784.1 Protein Homology CDS 1073911 1074330 . - 0 ID=cds-WP_003404920.1;Parent=gene-AL42_RS10645;Dbxref=GenBank:WP_003404920.1;Name=WP_003404920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215480.1;locus_tag=AL42_RS10645;product=hypothetical protein;protein_id=WP_003404920.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1074366 1074968 . - . ID=gene-AL42_RS10650;Name=AL42_RS10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10650;old_locus_tag=AL42_01004 NZ_KK316784.1 Protein Homology CDS 1074366 1074968 . - 0 ID=cds-WP_003900243.1;Parent=gene-AL42_RS10650;Dbxref=GenBank:WP_003900243.1;Name=WP_003900243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215481.2;locus_tag=AL42_RS10650;product=DUF1707 SHOCT-like domain-containing protein;protein_id=WP_003900243.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1075108 1075467 . + . ID=gene-AL42_RS10655;Name=csoR;gbkey=Gene;gene=csoR;gene_biotype=protein_coding;locus_tag=AL42_RS10655;old_locus_tag=AL42_01005 NZ_KK316784.1 Protein Homology CDS 1075108 1075467 . + 0 ID=cds-WP_003404935.1;Parent=gene-AL42_RS10655;Dbxref=GenBank:WP_003404935.1;Name=WP_003404935.1;gbkey=CDS;gene=csoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215482.1;locus_tag=AL42_RS10655;product=copper-sensing transcriptional repressor CsoR;protein_id=WP_003404935.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1075524 1075820 . + . ID=gene-AL42_RS10660;Name=AL42_RS10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10660;old_locus_tag=AL42_01006 NZ_KK316784.1 Protein Homology CDS 1075524 1075820 . + 0 ID=cds-WP_003404939.1;Parent=gene-AL42_RS10660;Dbxref=GenBank:WP_003404939.1;Name=WP_003404939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215483.1;locus_tag=AL42_RS10660;product=DUF1490 family protein;protein_id=WP_003404939.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1075876 1078188 . + . ID=gene-AL42_RS10665;Name=ctpV;gbkey=Gene;gene=ctpV;gene_biotype=protein_coding;locus_tag=AL42_RS10665;old_locus_tag=AL42_01007 NZ_KK316784.1 Protein Homology CDS 1075876 1078188 . + 0 ID=cds-WP_003404941.1;Parent=gene-AL42_RS10665;Dbxref=GenBank:WP_003404941.1;Name=WP_003404941.1;gbkey=CDS;gene=ctpV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215484.3;locus_tag=AL42_RS10665;product=copper-translocating P-type ATPase;protein_id=WP_003404941.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1078185 1078817 . + . ID=gene-AL42_RS10670;Name=AL42_RS10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10670;old_locus_tag=AL42_01008 NZ_KK316784.1 Protein Homology CDS 1078185 1078817 . + 0 ID=cds-WP_003898666.1;Parent=gene-AL42_RS10670;Dbxref=GenBank:WP_003898666.1;Name=WP_003898666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215485.1;locus_tag=AL42_RS10670;product=DUF5134 domain-containing protein;protein_id=WP_003898666.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1078908 1079717 . - . ID=gene-AL42_RS10675;Name=AL42_RS10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10675;old_locus_tag=AL42_01009 NZ_KK316784.1 Protein Homology CDS 1078908 1079717 . - 0 ID=cds-WP_003404949.1;Parent=gene-AL42_RS10675;Dbxref=GenBank:WP_003404949.1;Name=WP_003404949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215486.1;locus_tag=AL42_RS10675;product=enoyl-CoA hydratase family protein;protein_id=WP_003404949.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1079717 1080883 . - . ID=gene-AL42_RS10680;Name=AL42_RS10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10680;old_locus_tag=AL42_01010 NZ_KK316784.1 Protein Homology CDS 1079717 1080883 . - 0 ID=cds-WP_003898667.1;Parent=gene-AL42_RS10680;Dbxref=GenBank:WP_003898667.1;Name=WP_003898667.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215487.1;locus_tag=AL42_RS10680;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003898667.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1080880 1082883 . - . ID=gene-AL42_RS10685;Name=AL42_RS10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10685;old_locus_tag=AL42_01011 NZ_KK316784.1 Protein Homology CDS 1080880 1082883 . - 0 ID=cds-WP_003900244.1;Parent=gene-AL42_RS10685;Dbxref=GenBank:WP_003900244.1;Name=WP_003900244.1;Ontology_term=GO:0004075,GO:0005524,GO:0016421,GO:0046872;gbkey=CDS;go_function=biotin carboxylase activity|0004075||IEA,ATP binding|0005524||IEA,CoA carboxylase activity|0016421||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215488.1;locus_tag=AL42_RS10685;product=acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha;protein_id=WP_003900244.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1082889 1084478 . - . ID=gene-AL42_RS10690;Name=AL42_RS10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10690;old_locus_tag=AL42_01012 NZ_KK316784.1 Protein Homology CDS 1082889 1084478 . - 0 ID=cds-WP_003900245.1;Parent=gene-AL42_RS10690;Dbxref=GenBank:WP_003900245.1;Name=WP_003900245.1;Ontology_term=GO:0006633,GO:0003989,GO:0016874,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,ligase activity|0016874||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215489.1;locus_tag=AL42_RS10690;product=acyl-CoA carboxylase subunit beta;protein_id=WP_003900245.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1084481 1085629 . - . ID=gene-AL42_RS10695;Name=AL42_RS10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10695;old_locus_tag=AL42_01013 NZ_KK316784.1 Protein Homology CDS 1084481 1085629 . - 0 ID=cds-WP_003898670.1;Parent=gene-AL42_RS10695;Dbxref=GenBank:WP_003898670.1;Name=WP_003898670.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215490.1;locus_tag=AL42_RS10695;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003898670.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1085626 1087308 . - . ID=gene-AL42_RS10700;Name=AL42_RS10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10700;old_locus_tag=AL42_01014 NZ_KK316784.1 Protein Homology CDS 1085626 1087308 . - 0 ID=cds-WP_003404960.1;Parent=gene-AL42_RS10700;Dbxref=GenBank:WP_003404960.1;Name=WP_003404960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215491.1;locus_tag=AL42_RS10700;product=acyclic terpene utilization AtuA family protein;protein_id=WP_003404960.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1087507 1090278 . + . ID=gene-AL42_RS10705;Name=AL42_RS10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10705;old_locus_tag=AL42_01015 NZ_KK316784.1 Protein Homology CDS 1087507 1090278 . + 0 ID=cds-WP_010886098.1;Parent=gene-AL42_RS10705;Dbxref=GenBank:WP_010886098.1;Name=WP_010886098.1;Ontology_term=GO:0004190;gbkey=CDS;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177773.1;locus_tag=AL42_RS10705;product=PecA family PE domain-processing aspartic protease;protein_id=WP_010886098.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1090495 1091502 . - . ID=gene-AL42_RS27920;Name=AL42_RS27920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27920;old_locus_tag=AL42_01016 NZ_KK316784.1 Protein Homology CDS 1090495 1091502 . - 0 ID=cds-WP_031721798.1;Parent=gene-AL42_RS27920;Dbxref=GenBank:WP_031721798.1;Name=WP_031721798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177774.1;locus_tag=AL42_RS27920;product=PE-PGRS family protein;protein_id=WP_031721798.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1091816 1092010 . - . ID=gene-AL42_RS10715;Name=AL42_RS10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10715;old_locus_tag=AL42_01017 NZ_KK316784.1 Protein Homology CDS 1091816 1092010 . - 0 ID=cds-WP_003907536.1;Parent=gene-AL42_RS10715;Dbxref=GenBank:WP_003907536.1;Name=WP_003907536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215494.2;locus_tag=AL42_RS10715;product=hypothetical protein;protein_id=WP_003907536.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1092032 1092205 . + . ID=gene-AL42_RS10720;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=AL42_RS10720;old_locus_tag=AL42_01018 NZ_KK316784.1 Protein Homology CDS 1092032 1092205 . + 0 ID=cds-WP_003405053.1;Parent=gene-AL42_RS10720;Dbxref=GenBank:WP_003405053.1;Name=WP_003405053.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011892777.1;locus_tag=AL42_RS10720;product=50S ribosomal protein L32;protein_id=WP_003405053.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1092224 1093597 . - . ID=gene-AL42_RS10725;Name=AL42_RS10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10725;old_locus_tag=AL42_01019 NZ_KK316784.1 Protein Homology CDS 1092224 1093597 . - 0 ID=cds-WP_003910962.1;Parent=gene-AL42_RS10725;Dbxref=GenBank:WP_003910962.1;Name=WP_003910962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177775.1;locus_tag=AL42_RS10725;product=PE-PGRS family protein;protein_id=WP_003910962.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1093968 1094654 . + . ID=gene-AL42_RS10730;Name=mprA;gbkey=Gene;gene=mprA;gene_biotype=protein_coding;locus_tag=AL42_RS10730;old_locus_tag=AL42_01020 NZ_KK316784.1 Protein Homology CDS 1093968 1094654 . + 0 ID=cds-WP_003916757.1;Parent=gene-AL42_RS10730;Dbxref=GenBank:WP_003916757.1;Name=WP_003916757.1;gbkey=CDS;gene=mprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215496.2;locus_tag=AL42_RS10730;product=two-component system response regulator MprA;protein_id=WP_003916757.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1094654 1096168 . + . ID=gene-AL42_RS10735;Name=mprB;gbkey=Gene;gene=mprB;gene_biotype=protein_coding;locus_tag=AL42_RS10735;old_locus_tag=AL42_01021 NZ_KK316784.1 Protein Homology CDS 1094654 1096168 . + 0 ID=cds-WP_003405123.1;Parent=gene-AL42_RS10735;Dbxref=GenBank:WP_003405123.1;Name=WP_003405123.1;gbkey=CDS;gene=mprB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215497.1;locus_tag=AL42_RS10735;product=two-component system sensor histidine kinase MprB;protein_id=WP_003405123.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1096212 1097606 . + . ID=gene-AL42_RS10740;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=AL42_RS10740;old_locus_tag=AL42_01022 NZ_KK316784.1 Protein Homology CDS 1096212 1097606 . + 0 ID=cds-WP_003901059.1;Parent=gene-AL42_RS10740;Dbxref=GenBank:WP_003901059.1;Name=WP_003901059.1;gbkey=CDS;gene=pepD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215498.1;locus_tag=AL42_RS10740;product=serine protease PepD;protein_id=WP_003901059.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1097606 1098151 . + . ID=gene-AL42_RS10745;Name=AL42_RS10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10745;old_locus_tag=AL42_01023 NZ_KK316784.1 Protein Homology CDS 1097606 1098151 . + 0 ID=cds-WP_003405127.1;Parent=gene-AL42_RS10745;Dbxref=GenBank:WP_003405127.1;Name=WP_003405127.1;Ontology_term=GO:0006777,GO:0030151,GO:0046872;gbkey=CDS;go_function=molybdenum ion binding|0030151||IEA,metal ion binding|0046872||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215499.1;locus_tag=AL42_RS10745;product=MogA/MoaB family molybdenum cofactor biosynthesis protein;protein_id=WP_003405127.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1098171 1098626 . - . ID=gene-AL42_RS10750;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=AL42_RS10750;old_locus_tag=AL42_01024 NZ_KK316784.1 Protein Homology CDS 1098171 1098626 . - 0 ID=cds-WP_003405128.1;Parent=gene-AL42_RS10750;Dbxref=GenBank:WP_003405128.1;Name=WP_003405128.1;Ontology_term=GO:0034220,GO:0008381,GO:0016020;gbkey=CDS;gene=mscL;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215500.1;locus_tag=AL42_RS10750;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_003405128.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1098949 1099695 . + . ID=gene-AL42_RS10755;Name=AL42_RS10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10755;old_locus_tag=AL42_01025 NZ_KK316784.1 Protein Homology CDS 1098949 1099695 . + 0 ID=cds-WP_003900248.1;Parent=gene-AL42_RS10755;Dbxref=GenBank:WP_003900248.1;Name=WP_003900248.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215501.1;locus_tag=AL42_RS10755;product=ABC transporter ATP-binding protein;protein_id=WP_003900248.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1099688 1102255 . + . ID=gene-AL42_RS10760;Name=AL42_RS10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10760;old_locus_tag=AL42_01026 NZ_KK316784.1 Protein Homology CDS 1099688 1102255 . + 0 ID=cds-WP_003905421.1;Parent=gene-AL42_RS10760;Dbxref=GenBank:WP_003905421.1;Name=WP_003905421.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215502.1;locus_tag=AL42_RS10760;product=ABC transporter permease;protein_id=WP_003905421.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1102262 1103422 . + . ID=gene-AL42_RS10765;Name=AL42_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10765;old_locus_tag=AL42_01027 NZ_KK316784.1 Protein Homology CDS 1102262 1103422 . + 0 ID=cds-WP_003905422.1;Parent=gene-AL42_RS10765;Dbxref=GenBank:WP_003905422.1;Name=WP_003905422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215503.1;locus_tag=AL42_RS10765;product=lipocalin-like domain-containing protein;protein_id=WP_003905422.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1103551 1104528 . - . ID=gene-AL42_RS10770;Name=grcC;gbkey=Gene;gene=grcC;gene_biotype=protein_coding;locus_tag=AL42_RS10770;old_locus_tag=AL42_01028 NZ_KK316784.1 Protein Homology CDS 1103551 1104528 . - 0 ID=cds-WP_003405136.1;Parent=gene-AL42_RS10770;Dbxref=GenBank:WP_003405136.1;Name=WP_003405136.1;gbkey=CDS;gene=grcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215504.1;locus_tag=AL42_RS10770;product=polyprenyl-diphosphate synthase GrcC;protein_id=WP_003405136.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1104589 1105245 . - . ID=gene-AL42_RS10775;Name=AL42_RS10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10775;old_locus_tag=AL42_01029 NZ_KK316784.1 Protein Homology CDS 1104589 1105245 . - 0 ID=cds-WP_003405138.1;Parent=gene-AL42_RS10775;Dbxref=GenBank:WP_003405138.1;Name=WP_003405138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215505.1;locus_tag=AL42_RS10775;product=SAF domain-containing protein;protein_id=WP_003405138.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1105318 1105650 . - . ID=gene-AL42_RS10780;Name=AL42_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10780;old_locus_tag=AL42_01030 NZ_KK316784.1 Protein Homology CDS 1105318 1105650 . - 0 ID=cds-WP_003405142.1;Parent=gene-AL42_RS10780;Dbxref=GenBank:WP_003405142.1;Name=WP_003405142.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215506.1;locus_tag=AL42_RS10780;product=FmdB family zinc ribbon protein;protein_id=WP_003405142.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1105724 1106317 . - . ID=gene-AL42_RS10785;Name=AL42_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10785;old_locus_tag=AL42_01031 NZ_KK316784.1 Protein Homology CDS 1105724 1106317 . - 0 ID=cds-WP_003901063.1;Parent=gene-AL42_RS10785;Dbxref=GenBank:WP_003901063.1;Name=WP_003901063.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215507.1;locus_tag=AL42_RS10785;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_003901063.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1106418 1107338 . + . ID=gene-AL42_RS10790;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=AL42_RS10790;old_locus_tag=AL42_01032 NZ_KK316784.1 Protein Homology CDS 1106418 1107338 . + 0 ID=cds-WP_003405145.1;Parent=gene-AL42_RS10790;Dbxref=GenBank:WP_003405145.1;Name=WP_003405145.1;Ontology_term=GO:0009225,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215508.1;locus_tag=AL42_RS10790;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=WP_003405145.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1107415 1108695 . + . ID=gene-AL42_RS10795;Name=glp;gbkey=Gene;gene=glp;gene_biotype=protein_coding;locus_tag=AL42_RS10795;old_locus_tag=AL42_01033 NZ_KK316784.1 Protein Homology CDS 1107415 1108695 . + 0 ID=cds-WP_003898680.1;Parent=gene-AL42_RS10795;Dbxref=GenBank:WP_003898680.1;Name=WP_003898680.1;Ontology_term=GO:1990586;gbkey=CDS;gene=glp;go_component=divisome complex|1990586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177776.1;locus_tag=AL42_RS10795;product=molybdotransferase-like divisome protein Glp;protein_id=WP_003898680.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1108716 1109369 . + . ID=gene-AL42_RS10800;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=AL42_RS10800;old_locus_tag=AL42_01034 NZ_KK316784.1 Protein Homology CDS 1108716 1109369 . + 0 ID=cds-WP_176722929.1;Parent=gene-AL42_RS10800;Dbxref=GenBank:WP_176722929.1;Name=WP_176722929.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;gene=rimJ;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898681.1;locus_tag=AL42_RS10800;product=GNAT family N-acetyltransferase;protein_id=WP_176722929.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1109530 1110606 . + . ID=gene-AL42_RS10805;Name=sepX;gbkey=Gene;gene=sepX;gene_biotype=protein_coding;gene_synonym=glpR;locus_tag=AL42_RS10805;old_locus_tag=AL42_01035 NZ_KK316784.1 Protein Homology CDS 1109530 1110606 . + 0 ID=cds-WP_003901065.1;Parent=gene-AL42_RS10805;Dbxref=GenBank:WP_003901065.1;Name=WP_003901065.1;Ontology_term=GO:1990586;gbkey=CDS;gene=sepX;go_component=divisome complex|1990586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215511.1;locus_tag=AL42_RS10805;product=divisome protein SepX/GlpR;protein_id=WP_003901065.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1110657 1110732 . + . ID=gene-AL42_RS10810;Name=AL42_RS10810;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL42_RS10810;old_locus_tag=AL42_01036 NZ_KK316784.1 tRNAscan-SE tRNA 1110657 1110732 . + . ID=rna-AL42_RS10810;Parent=gene-AL42_RS10810;anticodon=(pos:1110690..1110692);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS10810;product=tRNA-Ala NZ_KK316784.1 tRNAscan-SE exon 1110657 1110732 . + . ID=exon-AL42_RS10810-1;Parent=rna-AL42_RS10810;anticodon=(pos:1110690..1110692);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS10810;product=tRNA-Ala NZ_KK316784.1 RefSeq gene 1111007 1111258 . + . ID=gene-AL42_RS0104445;Name=AL42_RS0104445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0104445 NZ_KK316784.1 Protein Homology CDS 1111007 1111258 . + 0 ID=cds-WP_003405150.1;Parent=gene-AL42_RS0104445;Dbxref=GenBank:WP_003405150.1;Name=WP_003405150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030028.1;locus_tag=AL42_RS0104445;product=hypothetical protein;protein_id=WP_003405150.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1111319 1111528 . - . ID=gene-AL42_RS0104450;Name=AL42_RS0104450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0104450 NZ_KK316784.1 Protein Homology CDS 1111319 1111528 . - 0 ID=cds-WP_003405160.1;Parent=gene-AL42_RS0104450;Dbxref=GenBank:WP_003405160.1;Name=WP_003405160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015627059.1;locus_tag=AL42_RS0104450;product=hypothetical protein;protein_id=WP_003405160.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1111532 1111924 . - . ID=gene-AL42_RS0104455;Name=AL42_RS0104455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0104455 NZ_KK316784.1 Protein Homology CDS 1111532 1111924 . - 0 ID=cds-WP_009935838.1;Parent=gene-AL42_RS0104455;Dbxref=GenBank:WP_009935838.1;Name=WP_009935838.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015292599.1;locus_tag=AL42_RS0104455;product=class I SAM-dependent methyltransferase;protein_id=WP_009935838.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1111894 1112895 . + . ID=gene-AL42_RS10815;Name=AL42_RS10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10815;old_locus_tag=AL42_01038 NZ_KK316784.1 Protein Homology CDS 1111894 1112895 . + 0 ID=cds-WP_003405164.1;Parent=gene-AL42_RS10815;Dbxref=GenBank:WP_003405164.1;Name=WP_003405164.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215513.1;locus_tag=AL42_RS10815;product=GNAT family N-acetyltransferase;protein_id=WP_003405164.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1112892 1112981 . + . ID=gene-AL42_RS27130;Name=AL42_RS27130;end_range=1112981,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS27130;partial=true;pseudo=true;start_range=.,1112892 NZ_KK316784.1 Protein Homology CDS 1112892 1112981 . + 0 ID=cds-AL42_RS27130;Parent=gene-AL42_RS27130;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1112981,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003872787.1;locus_tag=AL42_RS27130;partial=true;product=DUF5642 family protein;pseudo=true;start_range=.,1112892;transl_table=11 NZ_KK316784.1 RefSeq gene 1113012 1113671 . + . ID=gene-AL42_RS10820;Name=AL42_RS10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10820;old_locus_tag=AL42_01039 NZ_KK316784.1 Protein Homology CDS 1113012 1113671 . + 0 ID=cds-WP_003911352.1;Parent=gene-AL42_RS10820;Dbxref=GenBank:WP_003911352.1;Name=WP_003911352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911352.1;locus_tag=AL42_RS10820;product=DUF5642 family protein;protein_id=WP_003911352.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1113677 1114273 . - . ID=gene-AL42_RS10825;Name=AL42_RS10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10825;old_locus_tag=AL42_01040 NZ_KK316784.1 Protein Homology CDS 1113677 1114273 . - 0 ID=cds-WP_003913180.1;Parent=gene-AL42_RS10825;Dbxref=GenBank:WP_003913180.1;Name=WP_003913180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632682.1;locus_tag=AL42_RS10825;product=alpha-ketoglutarate-dependent dioxygenase AlkB;protein_id=WP_003913180.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1114331 1115539 . + . ID=gene-AL42_RS10830;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=AL42_RS10830;old_locus_tag=AL42_01041 NZ_KK316784.1 Protein Homology CDS 1114331 1115539 . + 0 ID=cds-WP_003405169.1;Parent=gene-AL42_RS10830;Dbxref=GenBank:WP_003405169.1;Name=WP_003405169.1;Ontology_term=GO:0019546,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=L-arginine deiminase pathway|0019546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215517.1;locus_tag=AL42_RS10830;product=arginine deiminase;protein_id=WP_003405169.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1115574 1117085 . - . ID=gene-AL42_RS10835;Name=AL42_RS10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10835;old_locus_tag=AL42_01042 NZ_KK316784.1 Protein Homology CDS 1115574 1117085 . - 0 ID=cds-WP_003901066.1;Parent=gene-AL42_RS10835;Dbxref=GenBank:WP_003901066.1;Name=WP_003901066.1;Ontology_term=GO:0004169;gbkey=CDS;go_function=dolichyl-phosphate-mannose-protein mannosyltransferase activity|0004169||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215518.1;locus_tag=AL42_RS10835;product=dolichyl-phosphate-mannose--protein mannosyltransferase;protein_id=WP_003901066.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1117168 1118025 . + . ID=gene-AL42_RS10840;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=AL42_RS10840;old_locus_tag=AL42_01043 NZ_KK316784.1 Protein Homology CDS 1117168 1118025 . + 0 ID=cds-WP_003405173.1;Parent=gene-AL42_RS10840;Dbxref=GenBank:WP_003405173.1;Name=WP_003405173.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215519.1;locus_tag=AL42_RS10840;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_003405173.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1118035 1119294 . - . ID=gene-AL42_RS10845;Name=AL42_RS10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10845;old_locus_tag=AL42_01044 NZ_KK316784.1 Protein Homology CDS 1118035 1119294 . - 0 ID=cds-WP_003910253.1;Parent=gene-AL42_RS10845;Dbxref=GenBank:WP_003910253.1;Name=WP_003910253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215520.1;locus_tag=AL42_RS10845;product=hypothetical protein;protein_id=WP_003910253.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1119368 1120654 . - . ID=gene-AL42_RS10850;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=AL42_RS10850;old_locus_tag=AL42_01045 NZ_KK316784.1 Protein Homology CDS 1119368 1120654 . - 0 ID=cds-WP_003405178.1;Parent=gene-AL42_RS10850;Dbxref=GenBank:WP_003405178.1;Name=WP_003405178.1;Ontology_term=GO:0009396;gbkey=CDS;gene=pabB;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003405178.1;locus_tag=AL42_RS10850;product=aminodeoxychorismate synthase component I;protein_id=WP_003405178.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1120860 1122563 . + . ID=gene-AL42_RS10855;Name=AL42_RS10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10855;old_locus_tag=AL42_01046 NZ_KK316784.1 Protein Homology CDS 1120860 1122563 . + 0 ID=cds-WP_003405180.1;Parent=gene-AL42_RS10855;Dbxref=GenBank:WP_003405180.1;Name=WP_003405180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215522.1;locus_tag=AL42_RS10855;product=hypothetical protein;protein_id=WP_003405180.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1122590 1124149 . - . ID=gene-AL42_RS10860;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=AL42_RS10860;old_locus_tag=AL42_01047 NZ_KK316784.1 Protein Homology CDS 1122590 1124149 . - 0 ID=cds-WP_003405183.1;Parent=gene-AL42_RS10860;Dbxref=GenBank:WP_003405183.1;Name=WP_003405183.1;Ontology_term=GO:0006431,GO:0000049,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=tRNA binding|0000049||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215523.1;locus_tag=AL42_RS10860;product=methionine--tRNA ligase;protein_id=WP_003405183.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1124169 1125029 . + . ID=gene-AL42_RS10865;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=AL42_RS10865;old_locus_tag=AL42_01048 NZ_KK316784.1 Protein Homology CDS 1124169 1125029 . + 0 ID=cds-WP_003898688.1;Parent=gene-AL42_RS10865;Dbxref=GenBank:WP_003898688.1;Name=WP_003898688.1;gbkey=CDS;gene=tatD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898688.1;locus_tag=AL42_RS10865;product=TatD family hydrolase;protein_id=WP_003898688.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1125198 1126325 . + . ID=gene-AL42_RS10870;Name=rpfB;gbkey=Gene;gene=rpfB;gene_biotype=protein_coding;locus_tag=AL42_RS10870;old_locus_tag=AL42_01049 NZ_KK316784.1 Protein Homology CDS 1125198 1126325 . + 0 ID=cds-WP_023637366.1;Parent=gene-AL42_RS10870;Dbxref=GenBank:WP_023637366.1;Name=WP_023637366.1;gbkey=CDS;gene=rpfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_031657245.1;locus_tag=AL42_RS10870;product=resuscitation-promoting factor protein RpfB;protein_id=WP_023637366.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1126298 1127251 . + . ID=gene-AL42_RS10875;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=AL42_RS10875;old_locus_tag=AL42_01050 NZ_KK316784.1 Protein Homology CDS 1126298 1127251 . + 0 ID=cds-WP_003405191.1;Parent=gene-AL42_RS10875;Dbxref=GenBank:WP_003405191.1;Name=WP_003405191.1;Ontology_term=GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215526.1;locus_tag=AL42_RS10875;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_003405191.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1127301 1128257 . + . ID=gene-AL42_RS10880;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=AL42_RS10880;old_locus_tag=AL42_01051 NZ_KK316784.1 Protein Homology CDS 1127301 1128257 . + 0 ID=cds-WP_003898690.1;Parent=gene-AL42_RS10880;Dbxref=GenBank:WP_003898690.1;Name=WP_003898690.1;Ontology_term=GO:0016114,GO:0005524,GO:0050515;gbkey=CDS;gene=ispE;go_function=ATP binding|0005524||IEA,4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912970.1;locus_tag=AL42_RS10880;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_003898690.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1128274 1128567 . + . ID=gene-AL42_RS10885;Name=AL42_RS10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10885;old_locus_tag=AL42_01052 NZ_KK316784.1 Protein Homology CDS 1128274 1128567 . + 0 ID=cds-WP_003900254.1;Parent=gene-AL42_RS10885;Dbxref=GenBank:WP_003900254.1;Name=WP_003900254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215528.1;locus_tag=AL42_RS10885;product=hypothetical protein;protein_id=WP_003900254.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1128771 1130405 . + . ID=gene-AL42_RS10890;Name=AL42_RS10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10890;old_locus_tag=AL42_01053 NZ_KK316784.1 Protein Homology CDS 1128771 1130405 . + 0 ID=cds-WP_003405202.1;Parent=gene-AL42_RS10890;Dbxref=GenBank:WP_003405202.1;Name=WP_003405202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215529.1;locus_tag=AL42_RS10890;product=fatty acyl-AMP ligase;protein_id=WP_003405202.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1130479 1131054 . - . ID=gene-AL42_RS10895;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=AL42_RS10895;old_locus_tag=AL42_01054 NZ_KK316784.1 Protein Homology CDS 1130479 1131054 . - 0 ID=cds-WP_003405251.1;Parent=gene-AL42_RS10895;Dbxref=GenBank:WP_003405251.1;Name=WP_003405251.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215530.1;locus_tag=AL42_RS10895;product=aminoacyl-tRNA hydrolase;protein_id=WP_003405251.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1131067 1131714 . - . ID=gene-AL42_RS10900;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=AL42_RS10900;old_locus_tag=AL42_01055 NZ_KK316784.1 Protein Homology CDS 1131067 1131714 . - 0 ID=cds-WP_003405254.1;Parent=gene-AL42_RS10900;Dbxref=GenBank:WP_003405254.1;Name=WP_003405254.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215531.1;locus_tag=AL42_RS10900;product=50S ribosomal protein L25/general stress protein Ctc;protein_id=WP_003405254.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1131931 1132539 . - . ID=gene-AL42_RS10905;Name=AL42_RS10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10905;old_locus_tag=AL42_01056 NZ_KK316784.1 Protein Homology CDS 1131931 1132539 . - 0 ID=cds-WP_042507738.1;Parent=gene-AL42_RS10905;Dbxref=GenBank:WP_042507738.1;Name=WP_042507738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014941374.1;locus_tag=AL42_RS10905;product=LpqN/LpqT family lipoprotein;protein_id=WP_042507738.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1132647 1133627 . - . ID=gene-AL42_RS10910;Name=prsA;gbkey=Gene;gene=prsA;gene_biotype=protein_coding;locus_tag=AL42_RS10910;old_locus_tag=AL42_01057 NZ_KK316784.1 Protein Homology CDS 1132647 1133627 . - 0 ID=cds-WP_003405263.1;Parent=gene-AL42_RS10910;Dbxref=GenBank:WP_003405263.1;Name=WP_003405263.1;Ontology_term=GO:0009058,GO:0000287,GO:0004749;gbkey=CDS;gene=prsA;go_function=magnesium ion binding|0000287||IEA,ribose phosphate diphosphokinase activity|0004749||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215533.1;locus_tag=AL42_RS10910;product=ribose-phosphate diphosphokinase;protein_id=WP_003405263.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1133719 1135206 . - . ID=gene-AL42_RS10915;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=AL42_RS10915;old_locus_tag=AL42_01058 NZ_KK316784.1 Protein Homology CDS 1133719 1135206 . - 0 ID=cds-WP_003405267.1;Parent=gene-AL42_RS10915;Dbxref=GenBank:WP_003405267.1;Name=WP_003405267.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215534.1;locus_tag=AL42_RS10915;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_003405267.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1135222 1135293 . - . ID=gene-AL42_RS10920;Name=AL42_RS10920;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL42_RS10920;old_locus_tag=AL42_01059 NZ_KK316784.1 tRNAscan-SE tRNA 1135222 1135293 . - . ID=rna-AL42_RS10920;Parent=gene-AL42_RS10920;anticodon=(pos:complement(1135258..1135260));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS10920;product=tRNA-Gln NZ_KK316784.1 tRNAscan-SE exon 1135222 1135293 . - . ID=exon-AL42_RS10920-1;Parent=rna-AL42_RS10920;anticodon=(pos:complement(1135258..1135260));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS10920;product=tRNA-Gln NZ_KK316784.1 RefSeq gene 1135461 1136054 . + . ID=gene-AL42_RS10925;Name=AL42_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10925;old_locus_tag=AL42_01060 NZ_KK316784.1 Protein Homology CDS 1135461 1136054 . + 0 ID=cds-WP_003405271.1;Parent=gene-AL42_RS10925;Dbxref=GenBank:WP_003405271.1;Name=WP_003405271.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215535.1;locus_tag=AL42_RS10925;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003405271.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1136113 1139817 . + . ID=gene-AL42_RS10930;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=AL42_RS10930;old_locus_tag=AL42_01061 NZ_KK316784.1 Protein Homology CDS 1136113 1139817 . + 0 ID=cds-WP_003405273.1;Parent=gene-AL42_RS10930;Dbxref=GenBank:WP_003405273.1;Name=WP_003405273.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215536.1;locus_tag=AL42_RS10930;product=transcription-repair coupling factor;protein_id=WP_003405273.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1139817 1140794 . + . ID=gene-AL42_RS10935;Name=AL42_RS10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10935;old_locus_tag=AL42_01062 NZ_KK316784.1 Protein Homology CDS 1139817 1140794 . + 0 ID=cds-WP_003405276.1;Parent=gene-AL42_RS10935;Dbxref=GenBank:WP_003405276.1;Name=WP_003405276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215537.1;locus_tag=AL42_RS10935;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_003405276.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1140882 1141613 . + . ID=gene-AL42_RS10940;Name=lpqU;gbkey=Gene;gene=lpqU;gene_biotype=protein_coding;locus_tag=AL42_RS10940;old_locus_tag=AL42_01063 NZ_KK316784.1 Protein Homology CDS 1140882 1141613 . + 0 ID=cds-WP_003900256.1;Parent=gene-AL42_RS10940;Dbxref=GenBank:WP_003900256.1;Name=WP_003900256.1;Ontology_term=GO:0004553;gbkey=CDS;gene=lpqU;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215538.1;locus_tag=AL42_RS10940;product=lytic transglycosylase domain-containing protein;protein_id=WP_003900256.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1141710 1142999 . + . ID=gene-AL42_RS10945;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=AL42_RS10945;old_locus_tag=AL42_01064 NZ_KK316784.1 Protein Homology CDS 1141710 1142999 . + 0 ID=cds-WP_003901975.1;Parent=gene-AL42_RS10945;Dbxref=GenBank:WP_003901975.1;Name=WP_003901975.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215539.1;locus_tag=AL42_RS10945;product=phosphopyruvate hydratase;protein_id=WP_003901975.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1143004 1143690 . + . ID=gene-AL42_RS10950;Name=AL42_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10950;old_locus_tag=AL42_01065 NZ_KK316784.1 Protein Homology CDS 1143004 1143690 . + 0 ID=cds-WP_003405293.1;Parent=gene-AL42_RS10950;Dbxref=GenBank:WP_003405293.1;Name=WP_003405293.1;Ontology_term=GO:0051301;gbkey=CDS;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215540.1;locus_tag=AL42_RS10950;product=FtsB family cell division protein;protein_id=WP_003405293.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1143683 1144174 . + . ID=gene-AL42_RS10955;Name=AL42_RS10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS10955;old_locus_tag=AL42_01066 NZ_KK316784.1 Protein Homology CDS 1143683 1144174 . + 0 ID=cds-WP_003405296.1;Parent=gene-AL42_RS10955;Dbxref=GenBank:WP_003405296.1;Name=WP_003405296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003901072.1;locus_tag=AL42_RS10955;product=DUF501 domain-containing protein;protein_id=WP_003405296.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1144165 1145124 . + . ID=gene-AL42_RS10960;Name=ppx2;gbkey=Gene;gene=ppx2;gene_biotype=protein_coding;locus_tag=AL42_RS10960;old_locus_tag=AL42_01067 NZ_KK316784.1 Protein Homology CDS 1144165 1145124 . + 0 ID=cds-WP_003405299.1;Parent=gene-AL42_RS10960;Dbxref=GenBank:WP_003405299.1;Name=WP_003405299.1;gbkey=CDS;gene=ppx2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215542.1;locus_tag=AL42_RS10960;product=exopolyphosphatase Ppx2;protein_id=WP_003405299.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1145573 1146253 . - . ID=gene-AL42_RS10965;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=AL42_RS10965;old_locus_tag=AL42_01068 NZ_KK316784.1 Protein Homology CDS 1145573 1146253 . - 0 ID=cds-WP_003905437.1;Parent=gene-AL42_RS10965;Dbxref=GenBank:WP_003905437.1;Name=WP_003905437.1;gbkey=CDS;gene=kdpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215543.1;locus_tag=AL42_RS10965;product=two-component system response regulator KdpE;protein_id=WP_003905437.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1146250 1148832 . - . ID=gene-AL42_RS10970;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=protein_coding;locus_tag=AL42_RS10970;old_locus_tag=AL42_01069 NZ_KK316784.1 Protein Homology CDS 1146250 1148832 . - 0 ID=cds-WP_003898694.1;Parent=gene-AL42_RS10970;Dbxref=GenBank:WP_003898694.1;Name=WP_003898694.1;gbkey=CDS;gene=kdpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215544.1;locus_tag=AL42_RS10970;product=sensor histidine kinase KdpD;protein_id=WP_003898694.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1148923 1149069 . + . ID=gene-AL42_RS0104470;Name=AL42_RS0104470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0104470 NZ_KK316784.1 Protein Homology CDS 1148923 1149069 . + 0 ID=cds-WP_003405313.1;Parent=gene-AL42_RS0104470;Dbxref=GenBank:WP_003405313.1;Name=WP_003405313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003405313.1;locus_tag=AL42_RS0104470;product=hypothetical protein;protein_id=WP_003405313.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1149066 1149158 . + . ID=gene-AL42_RS10975;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=AL42_RS10975;old_locus_tag=AL42_01070 NZ_KK316784.1 Protein Homology CDS 1149066 1149158 . + 0 ID=cds-WP_003405316.1;Parent=gene-AL42_RS10975;Dbxref=GenBank:WP_003405316.1;Name=WP_003405316.1;Ontology_term=GO:0006813,GO:0043462,GO:0031004;gbkey=CDS;gene=kdpF;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_process=potassium ion transport|0006813||IEA,regulation of ATP-dependent activity|0043462||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177636.1;locus_tag=AL42_RS10975;product=K(+)-transporting ATPase subunit F;protein_id=WP_003405316.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1149158 1150873 . + . ID=gene-AL42_RS10980;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=AL42_RS10980;old_locus_tag=AL42_01071 NZ_KK316784.1 Protein Homology CDS 1149158 1150873 . + 0 ID=cds-WP_003405318.1;Parent=gene-AL42_RS10980;Dbxref=GenBank:WP_003405318.1;Name=WP_003405318.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215545.1;locus_tag=AL42_RS10980;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_003405318.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1150870 1152999 . + . ID=gene-AL42_RS10985;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=AL42_RS10985;old_locus_tag=AL42_01072 NZ_KK316784.1 Protein Homology CDS 1150870 1152999 . + 0 ID=cds-WP_003405320.1;Parent=gene-AL42_RS10985;Dbxref=GenBank:WP_003405320.1;Name=WP_003405320.1;Ontology_term=GO:0006813,GO:0005524,GO:0008556,GO:0016020,GO:0031004;gbkey=CDS;gene=kdpB;go_component=membrane|0016020||IEA,potassium ion-transporting ATPase complex|0031004||IEA;go_function=ATP binding|0005524||IEA,P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215546.1;locus_tag=AL42_RS10985;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_003405320.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1152999 1153568 . + . ID=gene-AL42_RS10990;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=AL42_RS10990;old_locus_tag=AL42_01073 NZ_KK316784.1 Protein Homology CDS 1152999 1153568 . + 0 ID=cds-WP_003405322.1;Parent=gene-AL42_RS10990;Dbxref=GenBank:WP_003405322.1;Name=WP_003405322.1;gbkey=CDS;gene=kdpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215547.1;locus_tag=AL42_RS10990;product=K(+)-transporting ATPase subunit C;protein_id=WP_003405322.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1153572 1155101 . - . ID=gene-AL42_RS10995;Name=trcS;gbkey=Gene;gene=trcS;gene_biotype=protein_coding;locus_tag=AL42_RS10995;old_locus_tag=AL42_01074 NZ_KK316784.1 Protein Homology CDS 1153572 1155101 . - 0 ID=cds-WP_003405324.1;Parent=gene-AL42_RS10995;Dbxref=GenBank:WP_003405324.1;Name=WP_003405324.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;gene=trcS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215548.1;locus_tag=AL42_RS10995;product=two component system sensor histidine kinase TrcS;protein_id=WP_003405324.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1155109 1155882 . - . ID=gene-AL42_RS11000;Name=trcR;gbkey=Gene;gene=trcR;gene_biotype=protein_coding;locus_tag=AL42_RS11000;old_locus_tag=AL42_01075 NZ_KK316784.1 Protein Homology CDS 1155109 1155882 . - 0 ID=cds-WP_003405328.1;Parent=gene-AL42_RS11000;Dbxref=GenBank:WP_003405328.1;Name=WP_003405328.1;gbkey=CDS;gene=trcR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215549.1;locus_tag=AL42_RS11000;product=two-component system response regulator TrcR;protein_id=WP_003405328.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1156064 1157504 . - . ID=gene-AL42_RS25635;Name=AL42_RS25635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS25635;pseudo=true NZ_KK316784.1 Protein Homology CDS 1156064 1157504 . - 0 ID=cds-AL42_RS25635;Parent=gene-AL42_RS25635;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612244.1;locus_tag=AL42_RS25635;product=ISNCY family transposase;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 1157690 1157974 . - . ID=gene-AL42_RS11015;Name=esxV;gbkey=Gene;gene=esxV;gene_biotype=protein_coding;locus_tag=AL42_RS11015;old_locus_tag=AL42_01079 NZ_KK316784.1 Protein Homology CDS 1157690 1157974 . - 0 ID=cds-WP_003405333.1;Parent=gene-AL42_RS11015;Dbxref=GenBank:WP_003405333.1;Name=WP_003405333.1;gbkey=CDS;gene=esxV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215553.1;locus_tag=AL42_RS11015;product=type VII secretion system protein EsxV;protein_id=WP_003405333.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1158001 1158297 . - . ID=gene-AL42_RS11020;Name=esxJ;gbkey=Gene;gene=esxJ;gene_biotype=protein_coding;locus_tag=AL42_RS11020;old_locus_tag=AL42_01080 NZ_KK316784.1 Protein Homology CDS 1158001 1158297 . - 0 ID=cds-WP_003405345.1;Parent=gene-AL42_RS11020;Dbxref=GenBank:WP_003405345.1;Name=WP_003405345.1;gbkey=CDS;gene=esxJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215554.1;locus_tag=AL42_RS11020;product=type VII secretion system ESX-5 protein EsxJ;protein_id=WP_003405345.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1158443 1159618 . - . ID=gene-AL42_RS11025;Name=AL42_RS11025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11025;old_locus_tag=AL42_01081 NZ_KK316784.1 Protein Homology CDS 1158443 1159618 . - 0 ID=cds-WP_003405368.1;Parent=gene-AL42_RS11025;Dbxref=GenBank:WP_003405368.1;Name=WP_003405368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177778.1;locus_tag=AL42_RS11025;product=PPE family protein;protein_id=WP_003405368.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1159695 1160522 . - . ID=gene-AL42_RS11030;Name=AL42_RS11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11030;old_locus_tag=AL42_01082 NZ_KK316784.1 Protein Homology CDS 1159695 1160522 . - 0 ID=cds-WP_003405370.1;Parent=gene-AL42_RS11030;Dbxref=GenBank:WP_003405370.1;Name=WP_003405370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177779.1;locus_tag=AL42_RS11030;product=PE family protein PE8;protein_id=WP_003405370.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1161310 1161549 . - . ID=gene-AL42_RS0104480;Name=AL42_RS0104480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0104480 NZ_KK316784.1 Protein Homology CDS 1161310 1161549 . - 0 ID=cds-WP_003405375.1;Parent=gene-AL42_RS0104480;Dbxref=GenBank:WP_003405375.1;Name=WP_003405375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009936438.1;locus_tag=AL42_RS0104480;product=hypothetical protein;protein_id=WP_003405375.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1161718 1162645 . - . ID=gene-AL42_RS25650;Name=AL42_RS25650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS25650;old_locus_tag=AL42_01083;pseudo=true NZ_KK316784.1 Protein Homology CDS 1161718 1162645 . - 0 ID=cds-AL42_RS25650;Parent=gene-AL42_RS25650;Note=frameshifted;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612358.1;locus_tag=AL42_RS25650;product=IS5-like element ISMt1 family transposase;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 1162928 1163953 . - . ID=gene-AL42_RS11040;Name=AL42_RS11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11040;old_locus_tag=AL42_01085 NZ_KK316784.1 Protein Homology CDS 1162928 1163953 . - 0 ID=cds-WP_003405514.1;Parent=gene-AL42_RS11040;Dbxref=GenBank:WP_003405514.1;Name=WP_003405514.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215559.1;locus_tag=AL42_RS11040;product=S1 family peptidase;protein_id=WP_003405514.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1164200 1164823 . + . ID=gene-AL42_RS11045;Name=AL42_RS11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11045;old_locus_tag=AL42_01086 NZ_KK316784.1 Protein Homology CDS 1164200 1164823 . + 0 ID=cds-WP_003405517.1;Parent=gene-AL42_RS11045;Dbxref=GenBank:WP_003405517.1;Name=WP_003405517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215560.1;locus_tag=AL42_RS11045;product=type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein;protein_id=WP_003405517.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1164820 1165700 . + . ID=gene-AL42_RS25655;Name=AL42_RS25655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS25655;pseudo=true NZ_KK316784.1 Protein Homology CDS 1164820 1165700 . + 0 ID=cds-AL42_RS25655;Parent=gene-AL42_RS25655;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215561.1;locus_tag=AL42_RS25655;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1166570 1167815 . + . ID=gene-AL42_RS11055;Name=AL42_RS11055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS11055;old_locus_tag=AL42_01089;pseudo=true NZ_KK316784.1 Protein Homology CDS 1166570 1167815 . + 0 ID=cds-AL42_RS11055;Parent=gene-AL42_RS11055;Note=frameshifted;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215563.1;locus_tag=AL42_RS11055;product=IS256-like element IS1081 family transposase;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 1168183 1169298 . - . ID=gene-AL42_RS11060;Name=AL42_RS11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11060;old_locus_tag=AL42_01090 NZ_KK316784.1 Protein Homology CDS 1168183 1169298 . - 0 ID=cds-WP_003901982.1;Parent=gene-AL42_RS11060;Dbxref=GenBank:WP_003901982.1;Name=WP_003901982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215564.1;locus_tag=AL42_RS11060;product=hypothetical protein;protein_id=WP_003901982.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1169255 1169458 . - . ID=gene-AL42_RS0104510;Name=AL42_RS0104510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0104510 NZ_KK316784.1 Protein Homology CDS 1169255 1169458 . - 0 ID=cds-WP_003405585.1;Parent=gene-AL42_RS0104510;Dbxref=GenBank:WP_003405585.1;Name=WP_003405585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003405585.1;locus_tag=AL42_RS0104510;product=hypothetical protein;protein_id=WP_003405585.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1169531 1169977 . + . ID=gene-AL42_RS11065;Name=AL42_RS11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11065;old_locus_tag=AL42_01091 NZ_KK316784.1 Protein Homology CDS 1169531 1169977 . + 0 ID=cds-WP_003405595.1;Parent=gene-AL42_RS11065;Dbxref=GenBank:WP_003405595.1;Name=WP_003405595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215565.1;locus_tag=AL42_RS11065;product=oxidation-sensing regulator MosR;protein_id=WP_003405595.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1170026 1170931 . + . ID=gene-AL42_RS11070;Name=AL42_RS11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11070;old_locus_tag=AL42_01092 NZ_KK316784.1 Protein Homology CDS 1170026 1170931 . + 0 ID=cds-WP_003405600.1;Parent=gene-AL42_RS11070;Dbxref=GenBank:WP_003405600.1;Name=WP_003405600.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215566.1;locus_tag=AL42_RS11070;product=SDR family oxidoreductase;protein_id=WP_003405600.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1170969 1171085 . - . ID=gene-AL42_RS28100;Name=AL42_RS28100;end_range=1171085,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS28100;partial=true;pseudo=true;start_range=.,1170969 NZ_KK316784.1 Protein Homology CDS 1170969 1171085 . - 0 ID=cds-AL42_RS28100;Parent=gene-AL42_RS28100;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1171085,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017487708.1;locus_tag=AL42_RS28100;partial=true;product=EthD domain-containing protein;pseudo=true;start_range=.,1170969;transl_table=11 NZ_KK316784.1 RefSeq gene 1171090 1172040 . - . ID=gene-AL42_RS28105;Name=AL42_RS28105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS28105;old_locus_tag=AL42_01093 NZ_KK316784.1 Protein Homology CDS 1171090 1172040 . - 0 ID=cds-WP_369810505.1;Parent=gene-AL42_RS28105;Dbxref=GenBank:WP_369810505.1;Name=WP_369810505.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020419.6;locus_tag=AL42_RS28105;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;protein_id=WP_369810505.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1173006 1173257 . + . ID=gene-AL42_RS27375;Name=AL42_RS27375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27375 NZ_KK316784.1 GeneMarkS-2+ CDS 1173006 1173257 . + 0 ID=cds-WP_003898708.1;Parent=gene-AL42_RS27375;Dbxref=GenBank:WP_003898708.1;Name=WP_003898708.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL42_RS27375;product=hypothetical protein;protein_id=WP_003898708.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1173420 1173647 . + . ID=gene-AL42_RS27380;Name=AL42_RS27380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27380 NZ_KK316784.1 Protein Homology CDS 1173420 1173647 . + 0 ID=cds-WP_234827446.1;Parent=gene-AL42_RS27380;Dbxref=GenBank:WP_234827446.1;Name=WP_234827446.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014691.6;locus_tag=AL42_RS27380;product=Fic family protein;protein_id=WP_234827446.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1174073 1174387 . + . ID=gene-AL42_RS11090;Name=AL42_RS11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11090;old_locus_tag=AL42_01096 NZ_KK316784.1 Protein Homology CDS 1174073 1174387 . + 0 ID=cds-WP_003905442.1;Parent=gene-AL42_RS11090;Dbxref=GenBank:WP_003905442.1;Name=WP_003905442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003905442.1;locus_tag=AL42_RS11090;product=hypothetical protein;protein_id=WP_003905442.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1174318 1174518 . + . ID=gene-AL42_RS27550;Name=AL42_RS27550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27550;old_locus_tag=AL42_01097 NZ_KK316784.1 Protein Homology CDS 1174318 1174518 . + 0 ID=cds-WP_223695525.1;Parent=gene-AL42_RS27550;Dbxref=GenBank:WP_223695525.1;Name=WP_223695525.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012798.6;locus_tag=AL42_RS27550;product=site-specific integrase;protein_id=WP_223695525.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1174541 1174614 . + . ID=gene-AL42_RS11100;Name=AL42_RS11100;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL42_RS11100;old_locus_tag=AL42_01098 NZ_KK316784.1 tRNAscan-SE tRNA 1174541 1174614 . + . ID=rna-AL42_RS11100;Parent=gene-AL42_RS11100;anticodon=(pos:1174575..1174577);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS11100;product=tRNA-Leu NZ_KK316784.1 tRNAscan-SE exon 1174541 1174614 . + . ID=exon-AL42_RS11100-1;Parent=rna-AL42_RS11100;anticodon=(pos:1174575..1174577);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS11100;product=tRNA-Leu NZ_KK316784.1 RefSeq gene 1174773 1175537 . + . ID=gene-AL42_RS11105;Name=AL42_RS11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11105;old_locus_tag=AL42_01099 NZ_KK316784.1 Protein Homology CDS 1174773 1175537 . + 0 ID=cds-WP_003900263.1;Parent=gene-AL42_RS11105;Dbxref=GenBank:WP_003900263.1;Name=WP_003900263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215572.1;locus_tag=AL42_RS11105;product=DUF427 domain-containing protein;protein_id=WP_003900263.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1175749 1175913 . - . ID=gene-AL42_RS26805;Name=AL42_RS26805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS26805 NZ_KK316784.1 Protein Homology CDS 1175749 1175913 . - 0 ID=cds-WP_003898712.1;Parent=gene-AL42_RS26805;Dbxref=GenBank:WP_003898712.1;Name=WP_003898712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003405615.1;locus_tag=AL42_RS26805;product=DUF222 domain-containing protein;protein_id=WP_003898712.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1176541 1177722 . + . ID=gene-AL42_RS11110;Name=AL42_RS11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11110;old_locus_tag=AL42_01100 NZ_KK316784.1 Protein Homology CDS 1176541 1177722 . + 0 ID=cds-WP_003405622.1;Parent=gene-AL42_RS11110;Dbxref=GenBank:WP_003405622.1;Name=WP_003405622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215573.1;locus_tag=AL42_RS11110;product=YncE family protein;protein_id=WP_003405622.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1177829 1179460 . + . ID=gene-AL42_RS11115;Name=AL42_RS11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11115;old_locus_tag=AL42_01101 NZ_KK316784.1 Protein Homology CDS 1177829 1179460 . + 0 ID=cds-WP_003405625.1;Parent=gene-AL42_RS11115;Dbxref=GenBank:WP_003405625.1;Name=WP_003405625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215574.1;locus_tag=AL42_RS11115;product=long-chain fatty acid--CoA ligase;protein_id=WP_003405625.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1179536 1180600 . + . ID=gene-AL42_RS11120;Name=AL42_RS11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11120;old_locus_tag=AL42_01102 NZ_KK316784.1 Protein Homology CDS 1179536 1180600 . + 0 ID=cds-WP_003405629.1;Parent=gene-AL42_RS11120;Dbxref=GenBank:WP_003405629.1;Name=WP_003405629.1;Ontology_term=GO:0016638;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors|0016638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215575.1;locus_tag=AL42_RS11120;product=NAD(P)H-dependent amine dehydrogenase family protein;protein_id=WP_003405629.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1180653 1181126 . + . ID=gene-AL42_RS11125;Name=AL42_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11125;old_locus_tag=AL42_01103 NZ_KK316784.1 Protein Homology CDS 1180653 1181126 . + 0 ID=cds-WP_003405633.1;Parent=gene-AL42_RS11125;Dbxref=GenBank:WP_003405633.1;Name=WP_003405633.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215576.1;locus_tag=AL42_RS11125;product=SRPBCC family protein;protein_id=WP_003405633.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1181160 1182023 . + . ID=gene-AL42_RS11130;Name=AL42_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11130;old_locus_tag=AL42_01104 NZ_KK316784.1 Protein Homology CDS 1181160 1182023 . + 0 ID=cds-WP_003405636.1;Parent=gene-AL42_RS11130;Dbxref=GenBank:WP_003405636.1;Name=WP_003405636.1;Ontology_term=GO:0006541,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215577.1;locus_tag=AL42_RS11130;product=class II glutamine amidotransferase;protein_id=WP_003405636.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1182028 1182885 . + . ID=gene-AL42_RS11135;Name=AL42_RS11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11135;old_locus_tag=AL42_01105 NZ_KK316784.1 Protein Homology CDS 1182028 1182885 . + 0 ID=cds-WP_003405640.1;Parent=gene-AL42_RS11135;Dbxref=GenBank:WP_003405640.1;Name=WP_003405640.1;Ontology_term=GO:0052689;gbkey=CDS;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215578.1;locus_tag=AL42_RS11135;product=patatin-like phospholipase family protein;protein_id=WP_003405640.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1182886 1183968 . - . ID=gene-AL42_RS11140;Name=AL42_RS11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11140;old_locus_tag=AL42_01106 NZ_KK316784.1 Protein Homology CDS 1182886 1183968 . - 0 ID=cds-WP_003405642.1;Parent=gene-AL42_RS11140;Dbxref=GenBank:WP_003405642.1;Name=WP_003405642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215579.1;locus_tag=AL42_RS11140;product=patatin family protein;protein_id=WP_003405642.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1184049 1184468 . - . ID=gene-AL42_RS11145;Name=lpqV;gbkey=Gene;gene=lpqV;gene_biotype=protein_coding;locus_tag=AL42_RS11145;old_locus_tag=AL42_01107 NZ_KK316784.1 Protein Homology CDS 1184049 1184468 . - 0 ID=cds-WP_003405645.1;Parent=gene-AL42_RS11145;Dbxref=GenBank:WP_003405645.1;Name=WP_003405645.1;gbkey=CDS;gene=lpqV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215580.1;locus_tag=AL42_RS11145;product=lipoprotein LpqV;protein_id=WP_003405645.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1184580 1185146 . + . ID=gene-AL42_RS11150;Name=AL42_RS11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11150;old_locus_tag=AL42_01108 NZ_KK316784.1 Protein Homology CDS 1184580 1185146 . + 0 ID=cds-WP_003405649.1;Parent=gene-AL42_RS11150;Dbxref=GenBank:WP_003405649.1;Name=WP_003405649.1;Ontology_term=GO:0008198,GO:0017172;gbkey=CDS;go_function=ferrous iron binding|0008198||IEA,cysteine dioxygenase activity|0017172||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215581.1;locus_tag=AL42_RS11150;product=cysteine dioxygenase;protein_id=WP_003405649.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1185143 1185538 . + . ID=gene-AL42_RS11155;Name=AL42_RS11155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11155;old_locus_tag=AL42_01109 NZ_KK316784.1 Protein Homology CDS 1185143 1185538 . + 0 ID=cds-WP_003405651.1;Parent=gene-AL42_RS11155;Dbxref=GenBank:WP_003405651.1;Name=WP_003405651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215582.1;locus_tag=AL42_RS11155;product=rhodanese-like domain-containing protein;protein_id=WP_003405651.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1185566 1187587 . - . ID=gene-AL42_RS11160;Name=AL42_RS11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11160;old_locus_tag=AL42_01110 NZ_KK316784.1 Protein Homology CDS 1185566 1187587 . - 0 ID=cds-WP_016330390.1;Parent=gene-AL42_RS11160;Dbxref=GenBank:WP_016330390.1;Name=WP_016330390.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177780.1;locus_tag=AL42_RS11160;product=PE family protein;protein_id=WP_016330390.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1187920 1189440 . - . ID=gene-AL42_RS11165;Name=AL42_RS11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11165;old_locus_tag=AL42_01111 NZ_KK316784.1 Protein Homology CDS 1187920 1189440 . - 0 ID=cds-WP_049951305.1;Parent=gene-AL42_RS11165;Dbxref=GenBank:WP_049951305.1;Name=WP_049951305.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177781.1;locus_tag=AL42_RS11165;product=PE family protein;protein_id=WP_049951305.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1189802 1191565 . - . ID=gene-AL42_RS11170;Name=AL42_RS11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11170;old_locus_tag=AL42_01112 NZ_KK316784.1 Protein Homology CDS 1189802 1191565 . - 0 ID=cds-WP_003405708.1;Parent=gene-AL42_RS11170;Dbxref=GenBank:WP_003405708.1;Name=WP_003405708.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215585.1;locus_tag=AL42_RS11170;product=alpha/beta hydrolase;protein_id=WP_003405708.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1191562 1192335 . - . ID=gene-AL42_RS11175;Name=AL42_RS11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11175;old_locus_tag=AL42_01113 NZ_KK316784.1 Protein Homology CDS 1191562 1192335 . - 0 ID=cds-WP_003405712.1;Parent=gene-AL42_RS11175;Dbxref=GenBank:WP_003405712.1;Name=WP_003405712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215586.1;locus_tag=AL42_RS11175;product=enoyl-CoA hydratase;protein_id=WP_003405712.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1192347 1193384 . - . ID=gene-AL42_RS11180;Name=AL42_RS11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11180;old_locus_tag=AL42_01114 NZ_KK316784.1 Protein Homology CDS 1192347 1193384 . - 0 ID=cds-WP_031721800.1;Parent=gene-AL42_RS11180;Dbxref=GenBank:WP_031721800.1;Name=WP_031721800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215587.1;locus_tag=AL42_RS11180;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_031721800.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1193571 1194407 . + . ID=gene-AL42_RS11185;Name=AL42_RS11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11185;old_locus_tag=AL42_01115 NZ_KK316784.1 Protein Homology CDS 1193571 1194407 . + 0 ID=cds-WP_003405719.1;Parent=gene-AL42_RS11185;Dbxref=GenBank:WP_003405719.1;Name=WP_003405719.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215588.1;locus_tag=AL42_RS11185;product=Bax inhibitor-1/YccA family protein;protein_id=WP_003405719.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1194523 1195374 . + . ID=gene-AL42_RS11190;Name=AL42_RS11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11190;old_locus_tag=AL42_01116 NZ_KK316784.1 Protein Homology CDS 1194523 1195374 . + 0 ID=cds-WP_003405722.1;Parent=gene-AL42_RS11190;Dbxref=GenBank:WP_003405722.1;Name=WP_003405722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215589.1;locus_tag=AL42_RS11190;product=hypothetical protein;protein_id=WP_003405722.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1195448 1196665 . - . ID=gene-AL42_RS11195;Name=AL42_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11195;old_locus_tag=AL42_01117 NZ_KK316784.1 Protein Homology CDS 1195448 1196665 . - 0 ID=cds-WP_003405724.1;Parent=gene-AL42_RS11195;Dbxref=GenBank:WP_003405724.1;Name=WP_003405724.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215590.1;locus_tag=AL42_RS11195;product=acetyl-CoA C-acetyltransferase;protein_id=WP_003405724.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1196718 1197662 . - . ID=gene-AL42_RS11200;Name=AL42_RS11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11200;old_locus_tag=AL42_01118 NZ_KK316784.1 Protein Homology CDS 1196718 1197662 . - 0 ID=cds-WP_003405726.1;Parent=gene-AL42_RS11200;Dbxref=GenBank:WP_003405726.1;Name=WP_003405726.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215591.1;locus_tag=AL42_RS11200;product=SGNH/GDSL hydrolase family protein;protein_id=WP_003405726.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1197885 1198952 . + . ID=gene-AL42_RS11205;Name=lipU;gbkey=Gene;gene=lipU;gene_biotype=protein_coding;locus_tag=AL42_RS11205;old_locus_tag=AL42_01119 NZ_KK316784.1 Protein Homology CDS 1197885 1198952 . + 0 ID=cds-WP_003918181.1;Parent=gene-AL42_RS11205;Dbxref=GenBank:WP_003918181.1;Name=WP_003918181.1;gbkey=CDS;gene=lipU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003918181.1;locus_tag=AL42_RS11205;product=lipase LipU;protein_id=WP_003918181.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1199009 1200403 . + . ID=gene-AL42_RS11210;Name=cbs;gbkey=Gene;gene=cbs;gene_biotype=protein_coding;locus_tag=AL42_RS11210;old_locus_tag=AL42_01120 NZ_KK316784.1 Protein Homology CDS 1199009 1200403 . + 0 ID=cds-WP_003405730.1;Parent=gene-AL42_RS11210;Dbxref=GenBank:WP_003405730.1;Name=WP_003405730.1;Ontology_term=GO:0019343,GO:0004122,GO:0005737;gbkey=CDS;gene=cbs;go_component=cytoplasm|0005737||IEA;go_function=cystathionine beta-synthase activity|0004122||IEA;go_process=cysteine biosynthetic process via cystathionine|0019343||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177782.1;locus_tag=AL42_RS11210;product=cystathionine beta-synthase;protein_id=WP_003405730.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1200605 1201327 . + . ID=gene-AL42_RS11215;Name=pra;gbkey=Gene;gene=pra;gene_biotype=protein_coding;locus_tag=AL42_RS11215;old_locus_tag=AL42_01121 NZ_KK316784.1 Protein Homology CDS 1200605 1201327 . + 0 ID=cds-WP_003901991.1;Parent=gene-AL42_RS11215;Dbxref=GenBank:WP_003901991.1;Name=WP_003901991.1;Ontology_term=GO:0005886;gbkey=CDS;gene=pra;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215594.1;locus_tag=AL42_RS11215;product=RDD family protein;protein_id=WP_003901991.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1201359 1202525 . + . ID=gene-AL42_RS11220;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=AL42_RS11220;old_locus_tag=AL42_01122 NZ_KK316784.1 Protein Homology CDS 1201359 1202525 . + 0 ID=cds-WP_003405736.1;Parent=gene-AL42_RS11220;Dbxref=GenBank:WP_003405736.1;Name=WP_003405736.1;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;gene=metB;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215595.1;locus_tag=AL42_RS11220;product=cystathionine gamma-synthase;protein_id=WP_003405736.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1202596 1203090 . - . ID=gene-AL42_RS11225;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=AL42_RS11225;old_locus_tag=AL42_01123 NZ_KK316784.1 Protein Homology CDS 1202596 1203090 . - 0 ID=cds-WP_003405742.1;Parent=gene-AL42_RS11225;Dbxref=GenBank:WP_003405742.1;Name=WP_003405742.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010908869.1;locus_tag=AL42_RS11225;product=transcription elongation factor GreA;protein_id=WP_003405742.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1203276 1203710 . - . ID=gene-AL42_RS11230;Name=AL42_RS11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11230;old_locus_tag=AL42_01124 NZ_KK316784.1 Protein Homology CDS 1203276 1203710 . - 0 ID=cds-WP_003405744.1;Parent=gene-AL42_RS11230;Dbxref=GenBank:WP_003405744.1;Name=WP_003405744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215597.1;locus_tag=AL42_RS11230;product=DUF4307 domain-containing protein;protein_id=WP_003405744.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1203812 1204678 . + . ID=gene-AL42_RS11235;Name=mca;gbkey=Gene;gene=mca;gene_biotype=protein_coding;locus_tag=AL42_RS11235;old_locus_tag=AL42_01125 NZ_KK316784.1 Protein Homology CDS 1203812 1204678 . + 0 ID=cds-WP_003405746.1;Parent=gene-AL42_RS11235;Dbxref=GenBank:WP_003405746.1;Name=WP_003405746.1;Ontology_term=GO:0010126;gbkey=CDS;gene=mca;go_process=mycothiol metabolic process|0010126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215598.1;locus_tag=AL42_RS11235;product=mycothiol conjugate amidase Mca;protein_id=WP_003405746.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1204675 1204941 . + . ID=gene-AL42_RS11240;Name=AL42_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11240;old_locus_tag=AL42_01126 NZ_KK316784.1 Protein Homology CDS 1204675 1204941 . + 0 ID=cds-WP_003405749.1;Parent=gene-AL42_RS11240;Dbxref=GenBank:WP_003405749.1;Name=WP_003405749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215599.1;locus_tag=AL42_RS11240;product=hypothetical protein;protein_id=WP_003405749.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1204928 1206949 . + . ID=gene-AL42_RS11245;Name=AL42_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11245;old_locus_tag=AL42_01127 NZ_KK316784.1 Protein Homology CDS 1204928 1206949 . + 0 ID=cds-WP_003405750.1;Parent=gene-AL42_RS11245;Dbxref=GenBank:WP_003405750.1;Name=WP_003405750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215600.1;locus_tag=AL42_RS11245;product=thioredoxin domain-containing protein;protein_id=WP_003405750.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1207048 1207776 . - . ID=gene-AL42_RS11250;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=AL42_RS11250;old_locus_tag=AL42_01128 NZ_KK316784.1 Protein Homology CDS 1207048 1207776 . - 0 ID=cds-WP_003901993.1;Parent=gene-AL42_RS11250;Dbxref=GenBank:WP_003901993.1;Name=WP_003901993.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215601.1;locus_tag=AL42_RS11250;product=PAQR family membrane homeostasis protein TrhA;protein_id=WP_003901993.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1207887 1208675 . + . ID=gene-AL42_RS11255;Name=AL42_RS11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11255;old_locus_tag=AL42_01129 NZ_KK316784.1 Protein Homology CDS 1207887 1208675 . + 0 ID=cds-WP_003903314.1;Parent=gene-AL42_RS11255;Dbxref=GenBank:WP_003903314.1;Name=WP_003903314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215602.1;locus_tag=AL42_RS11255;product=(2Z%2C6E)-farnesyl diphosphate synthase;protein_id=WP_003903314.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1208852 1211152 . + . ID=gene-AL42_RS11260;Name=AL42_RS11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11260;old_locus_tag=AL42_01130 NZ_KK316784.1 Protein Homology CDS 1208852 1211152 . + 0 ID=cds-WP_016330392.1;Parent=gene-AL42_RS11260;Dbxref=GenBank:WP_016330392.1;Name=WP_016330392.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177783.1;locus_tag=AL42_RS11260;product=PE family protein;protein_id=WP_016330392.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1211359 1211649 . + . ID=gene-AL42_RS28110;Name=AL42_RS28110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS28110;old_locus_tag=AL42_01131;partial=true;pseudo=true;start_range=.,1211359 NZ_KK316784.1 Protein Homology CDS 1211359 1211649 . + 0 ID=cds-AL42_RS28110;Parent=gene-AL42_RS28110;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016765;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003878551.1;locus_tag=AL42_RS28110;partial=true;product=undecaprenyl diphosphate synthase family protein;pseudo=true;start_range=.,1211359;transl_table=11 NZ_KK316784.1 RefSeq gene 1211802 1212236 . + . ID=gene-AL42_RS28115;Name=AL42_RS28115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS28115;old_locus_tag=AL42_01132 NZ_KK316784.1 Protein Homology CDS 1211802 1212236 . + 0 ID=cds-WP_003900271.1;Parent=gene-AL42_RS28115;Dbxref=GenBank:WP_003900271.1;Name=WP_003900271.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014585063.1;locus_tag=AL42_RS28115;product=PE family protein;protein_id=WP_003900271.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1212253 1212501 . + . ID=gene-AL42_RS0104530;Name=AL42_RS0104530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0104530 NZ_KK316784.1 Protein Homology CDS 1212253 1212501 . + 0 ID=cds-WP_003901996.1;Parent=gene-AL42_RS0104530;Dbxref=GenBank:WP_003901996.1;Name=WP_003901996.1;Ontology_term=GO:0005975,GO:0004553,GO:0030246;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: protein motif:HMM:NF012762.6;locus_tag=AL42_RS0104530;product=cellulose binding domain-containing protein;protein_id=WP_003901996.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1212513 1212695 . + . ID=gene-AL42_RS0104535;Name=AL42_RS0104535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0104535 NZ_KK316784.1 Protein Homology CDS 1212513 1212695 . + 0 ID=cds-WP_003898724.1;Parent=gene-AL42_RS0104535;Dbxref=GenBank:WP_003898724.1;Name=WP_003898724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030029.1;locus_tag=AL42_RS0104535;product=hypothetical protein;protein_id=WP_003898724.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1212805 1212909 . + . ID=gene-AL42_RS27565;Name=AL42_RS27565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27565;old_locus_tag=AL42_01134 NZ_KK316784.1 Protein Homology CDS 1212805 1212909 . + 0 ID=cds-WP_003405770.1;Parent=gene-AL42_RS27565;Dbxref=GenBank:WP_003405770.1;Name=WP_003405770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003405770.1;locus_tag=AL42_RS27565;product=endo-1%2C4-beta-glucanase;protein_id=WP_003405770.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1212887 1213342 . + . ID=gene-AL42_RS11280;Name=AL42_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11280;old_locus_tag=AL42_01135 NZ_KK316784.1 Protein Homology CDS 1212887 1213342 . + 0 ID=cds-WP_003905452.1;Parent=gene-AL42_RS11280;Dbxref=GenBank:WP_003905452.1;Name=WP_003905452.1;Ontology_term=GO:0000272,GO:0008810;gbkey=CDS;go_function=cellulase activity|0008810||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015627137.1;locus_tag=AL42_RS11280;product=GH12 family glycosyl hydrolase domain-containing protein;protein_id=WP_003905452.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1213757 1216318 . + . ID=gene-AL42_RS11285;Name=AL42_RS11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11285;old_locus_tag=AL42_01136 NZ_KK316784.1 Protein Homology CDS 1213757 1216318 . + 0 ID=cds-WP_014585135.1;Parent=gene-AL42_RS11285;Dbxref=GenBank:WP_014585135.1;Name=WP_014585135.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177786.1;locus_tag=AL42_RS11285;product=PE family protein;protein_id=WP_014585135.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1216536 1217474 . - . ID=gene-AL42_RS11290;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=AL42_RS11290;old_locus_tag=AL42_01137 NZ_KK316784.1 Protein Homology CDS 1216536 1217474 . - 0 ID=cds-WP_003405790.1;Parent=gene-AL42_RS11290;Dbxref=GenBank:WP_003405790.1;Name=WP_003405790.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003875370.1;locus_tag=AL42_RS11290;product=type I pantothenate kinase;protein_id=WP_003405790.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1217862 1219142 . + . ID=gene-AL42_RS11295;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=AL42_RS11295;old_locus_tag=AL42_01138 NZ_KK316784.1 Protein Homology CDS 1217862 1219142 . + 0 ID=cds-WP_003405797.1;Parent=gene-AL42_RS11295;Dbxref=GenBank:WP_003405797.1;Name=WP_003405797.1;Ontology_term=GO:0019264,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177787.3;locus_tag=AL42_RS11295;product=serine hydroxymethyltransferase;protein_id=WP_003405797.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1219247 1220074 . + . ID=gene-AL42_RS11300;Name=AL42_RS11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11300;old_locus_tag=AL42_01139 NZ_KK316784.1 Protein Homology CDS 1219247 1220074 . + 0 ID=cds-WP_003405801.1;Parent=gene-AL42_RS11300;Dbxref=GenBank:WP_003405801.1;Name=WP_003405801.1;Ontology_term=GO:0006631,GO:0045300;gbkey=CDS;go_function=stearoyl-[ACP] desaturase activity|0045300||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215610.1;locus_tag=AL42_RS11300;product=acyl-ACP desaturase;protein_id=WP_003405801.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1220285 1221586 . + . ID=gene-AL42_RS11305;Name=AL42_RS11305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11305;old_locus_tag=AL42_01140 NZ_KK316784.1 Protein Homology CDS 1220285 1221586 . + 0 ID=cds-WP_003405802.1;Parent=gene-AL42_RS11305;Dbxref=GenBank:WP_003405802.1;Name=WP_003405802.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215611.1;locus_tag=AL42_RS11305;product=PhoH family protein;protein_id=WP_003405802.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1221673 1222548 . + . ID=gene-AL42_RS11310;Name=AL42_RS11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11310;old_locus_tag=AL42_01141 NZ_KK316784.1 Protein Homology CDS 1221673 1222548 . + 0 ID=cds-WP_003898725.1;Parent=gene-AL42_RS11310;Dbxref=GenBank:WP_003898725.1;Name=WP_003898725.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215612.1;locus_tag=AL42_RS11310;product=polysaccharide deacetylase family protein;protein_id=WP_003898725.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1222551 1223432 . - . ID=gene-AL42_RS11315;Name=AL42_RS11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11315;old_locus_tag=AL42_01142 NZ_KK316784.1 Protein Homology CDS 1222551 1223432 . - 0 ID=cds-WP_003405804.1;Parent=gene-AL42_RS11315;Dbxref=GenBank:WP_003405804.1;Name=WP_003405804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215613.1;locus_tag=AL42_RS11315;product=hypothetical protein;protein_id=WP_003405804.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1223429 1224853 . - . ID=gene-AL42_RS11320;Name=fum;gbkey=Gene;gene=fum;gene_biotype=protein_coding;locus_tag=AL42_RS11320;old_locus_tag=AL42_01143 NZ_KK316784.1 Protein Homology CDS 1223429 1224853 . - 0 ID=cds-WP_003405805.1;Parent=gene-AL42_RS11320;Dbxref=GenBank:WP_003405805.1;Name=WP_003405805.1;Ontology_term=GO:0006099,GO:0006106,GO:0006108,GO:0004333;gbkey=CDS;gene=fum;go_function=fumarate hydratase activity|0004333||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,fumarate metabolic process|0006106||IEA,malate metabolic process|0006108||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215614.1;locus_tag=AL42_RS11320;product=class II fumarate hydratase;protein_id=WP_003405805.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1224884 1225972 . - . ID=gene-AL42_RS11325;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=AL42_RS11325;old_locus_tag=AL42_01144 NZ_KK316784.1 Protein Homology CDS 1224884 1225972 . - 0 ID=cds-WP_003898726.1;Parent=gene-AL42_RS11325;Dbxref=GenBank:WP_003898726.1;Name=WP_003898726.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215615.3;locus_tag=AL42_RS11325;product=class II fructose-bisphosphatase;protein_id=WP_003898726.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1226028 1226672 . + . ID=gene-AL42_RS11330;Name=AL42_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11330;old_locus_tag=AL42_01145 NZ_KK316784.1 Protein Homology CDS 1226028 1226672 . + 0 ID=cds-WP_003915494.1;Parent=gene-AL42_RS11330;Dbxref=GenBank:WP_003915494.1;Name=WP_003915494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003915494.1;locus_tag=AL42_RS11330;product=DUF4245 domain-containing protein;protein_id=WP_003915494.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1226679 1227836 . - . ID=gene-AL42_RS11335;Name=AL42_RS11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11335;old_locus_tag=AL42_01146 NZ_KK316784.1 Protein Homology CDS 1226679 1227836 . - 0 ID=cds-WP_003898727.1;Parent=gene-AL42_RS11335;Dbxref=GenBank:WP_003898727.1;Name=WP_003898727.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215617.1;locus_tag=AL42_RS11335;product=AI-2E family transporter;protein_id=WP_003898727.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1227948 1228259 . - . ID=gene-AL42_RS11340;Name=mazF3;gbkey=Gene;gene=mazF3;gene_biotype=protein_coding;gene_synonym=mazF-mt6;locus_tag=AL42_RS11340;old_locus_tag=AL42_01147 NZ_KK316784.1 Protein Homology CDS 1227948 1228259 . - 0 ID=cds-WP_003405820.1;Parent=gene-AL42_RS11340;Dbxref=GenBank:WP_003405820.1;Name=WP_003405820.1;gbkey=CDS;gene=mazF3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215618.1;locus_tag=AL42_RS11340;product=type II toxin-antitoxin system toxin endoribonuclease MazF3;protein_id=WP_003405820.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1228259 1228579 . - . ID=gene-AL42_RS11345;Name=mazE3;gbkey=Gene;gene=mazE3;gene_biotype=protein_coding;locus_tag=AL42_RS11345;old_locus_tag=AL42_01148 NZ_KK316784.1 Protein Homology CDS 1228259 1228579 . - 0 ID=cds-WP_003405836.1;Parent=gene-AL42_RS11345;Dbxref=GenBank:WP_003405836.1;Name=WP_003405836.1;gbkey=CDS;gene=mazE3;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003405836.1;locus_tag=AL42_RS11345;product=type II toxin-antitoxin system antitoxin MazE3;protein_id=WP_003405836.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1228589 1230125 . + . ID=gene-AL42_RS25685;Name=AL42_RS25685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS25685;pseudo=true NZ_KK316784.1 Protein Homology CDS 1228589 1230125 . + 0 ID=cds-AL42_RS25685;Parent=gene-AL42_RS25685;Note=frameshifted;Ontology_term=GO:0016298,GO:0052689;gbkey=CDS;go_function=lipase activity|0016298||IEA,carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011724013.1;locus_tag=AL42_RS25685;product=carboxylesterase/lipase family protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 1230132 1231244 . - . ID=gene-AL42_RS11360;Name=AL42_RS11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11360;old_locus_tag=AL42_01151 NZ_KK316784.1 Protein Homology CDS 1230132 1231244 . - 0 ID=cds-WP_003405840.1;Parent=gene-AL42_RS11360;Dbxref=GenBank:WP_003405840.1;Name=WP_003405840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215622.1;locus_tag=AL42_RS11360;product=3 beta-hydroxysteroid dehydrogenase/delta 5-->4-isomerase;protein_id=WP_003405840.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1231254 1231511 . - . ID=gene-AL42_RS11365;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=AL42_RS11365;old_locus_tag=AL42_01152 NZ_KK316784.1 Protein Homology CDS 1231254 1231511 . - 0 ID=cds-WP_003405844.1;Parent=gene-AL42_RS11365;Dbxref=GenBank:WP_003405844.1;Name=WP_003405844.1;Ontology_term=GO:0006308,GO:0008855;gbkey=CDS;gene=xseB;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215623.1;locus_tag=AL42_RS11365;product=exodeoxyribonuclease VII small subunit;protein_id=WP_003405844.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1231501 1232748 . - . ID=gene-AL42_RS11370;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=AL42_RS11370;old_locus_tag=AL42_01153 NZ_KK316784.1 Protein Homology CDS 1231501 1232748 . - 0 ID=cds-WP_003405846.1;Parent=gene-AL42_RS11370;Dbxref=GenBank:WP_003405846.1;Name=WP_003405846.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215624.1;locus_tag=AL42_RS11370;product=exodeoxyribonuclease VII large subunit;protein_id=WP_003405846.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1232745 1233383 . - . ID=gene-AL42_RS11375;Name=AL42_RS11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11375;old_locus_tag=AL42_01154 NZ_KK316784.1 Protein Homology CDS 1232745 1233383 . - 0 ID=cds-WP_003898730.1;Parent=gene-AL42_RS11375;Dbxref=GenBank:WP_003898730.1;Name=WP_003898730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215625.1;locus_tag=AL42_RS11375;product=lipid droplet-associated protein;protein_id=WP_003898730.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1233473 1234480 . + . ID=gene-AL42_RS11380;Name=AL42_RS11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11380;old_locus_tag=AL42_01155 NZ_KK316784.1 Protein Homology CDS 1233473 1234480 . + 0 ID=cds-WP_003405853.1;Parent=gene-AL42_RS11380;Dbxref=GenBank:WP_003405853.1;Name=WP_003405853.1;Ontology_term=GO:0019288,GO:0046872,GO:0051745;gbkey=CDS;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177788.1;locus_tag=AL42_RS11380;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_003405853.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1234497 1235480 . - . ID=gene-AL42_RS11385;Name=AL42_RS11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11385;old_locus_tag=AL42_01156 NZ_KK316784.1 Protein Homology CDS 1234497 1235480 . - 0 ID=cds-WP_003898731.1;Parent=gene-AL42_RS11385;Dbxref=GenBank:WP_003898731.1;Name=WP_003898731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215627.2;locus_tag=AL42_RS11385;product=DUF6542 domain-containing protein;protein_id=WP_003898731.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1235543 1236616 . + . ID=gene-AL42_RS11390;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=AL42_RS11390;old_locus_tag=AL42_01157 NZ_KK316784.1 Protein Homology CDS 1235543 1236616 . + 0 ID=cds-WP_003898732.1;Parent=gene-AL42_RS11390;Dbxref=GenBank:WP_003898732.1;Name=WP_003898732.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215628.1;locus_tag=AL42_RS11390;product=redox-regulated ATPase YchF;protein_id=WP_003898732.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1236704 1236901 . + . ID=gene-AL42_RS11395;Name=AL42_RS11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11395;old_locus_tag=AL42_01158 NZ_KK316784.1 Protein Homology CDS 1236704 1236901 . + 0 ID=cds-WP_003405863.1;Parent=gene-AL42_RS11395;Dbxref=GenBank:WP_003405863.1;Name=WP_003405863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215629.1;locus_tag=AL42_RS11395;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_003405863.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1236898 1237272 . + . ID=gene-AL42_RS11400;Name=AL42_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11400;old_locus_tag=AL42_01159 NZ_KK316784.1 Protein Homology CDS 1236898 1237272 . + 0 ID=cds-WP_003405865.1;Parent=gene-AL42_RS11400;Dbxref=GenBank:WP_003405865.1;Name=WP_003405865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215630.1;locus_tag=AL42_RS11400;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003405865.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1237475 1238173 . + . ID=gene-AL42_RS11405;Name=AL42_RS11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11405;old_locus_tag=AL42_01160 NZ_KK316784.1 Protein Homology CDS 1237475 1238173 . + 0 ID=cds-WP_003898733.1;Parent=gene-AL42_RS11405;Dbxref=GenBank:WP_003898733.1;Name=WP_003898733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215631.1;locus_tag=AL42_RS11405;product=hypothetical protein;protein_id=WP_003898733.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1238291 1238476 . + . ID=gene-AL42_RS11410;Name=AL42_RS11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11410;old_locus_tag=AL42_01161 NZ_KK316784.1 Protein Homology CDS 1238291 1238476 . + 0 ID=cds-WP_003901093.1;Parent=gene-AL42_RS11410;Dbxref=GenBank:WP_003901093.1;Name=WP_003901093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215632.1;locus_tag=AL42_RS11410;product=hypothetical protein;protein_id=WP_003901093.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1238403 1238678 . - . ID=gene-AL42_RS11415;Name=AL42_RS11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11415;old_locus_tag=AL42_01162 NZ_KK316784.1 Protein Homology CDS 1238403 1238678 . - 0 ID=cds-WP_003405867.1;Parent=gene-AL42_RS11415;Dbxref=GenBank:WP_003405867.1;Name=WP_003405867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015627157.1;locus_tag=AL42_RS11415;product=hypothetical protein;protein_id=WP_003405867.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1238921 1239244 . + . ID=gene-AL42_RS11420;Name=AL42_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11420;old_locus_tag=AL42_01163 NZ_KK316784.1 Protein Homology CDS 1238921 1239244 . + 0 ID=cds-WP_003405871.1;Parent=gene-AL42_RS11420;Dbxref=GenBank:WP_003405871.1;Name=WP_003405871.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215633.1;locus_tag=AL42_RS11420;product=putative quinol monooxygenase;protein_id=WP_003405871.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1239259 1239969 . - . ID=gene-AL42_RS11425;Name=AL42_RS11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11425;old_locus_tag=AL42_01164 NZ_KK316784.1 Protein Homology CDS 1239259 1239969 . - 0 ID=cds-WP_003911399.1;Parent=gene-AL42_RS11425;Dbxref=GenBank:WP_003911399.1;Name=WP_003911399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013828012.1;locus_tag=AL42_RS11425;product=hypothetical protein;protein_id=WP_003911399.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1239991 1240200 . + . ID=gene-AL42_RS27145;Name=AL42_RS27145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27145 NZ_KK316784.1 Protein Homology CDS 1239991 1240200 . + 0 ID=cds-WP_003911400.1;Parent=gene-AL42_RS27145;Dbxref=GenBank:WP_003911400.1;Name=WP_003911400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016706054.1;locus_tag=AL42_RS27145;product=hypothetical protein;protein_id=WP_003911400.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1240152 1240922 . - . ID=gene-AL42_RS11435;Name=AL42_RS11435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS11435;old_locus_tag=AL42_01166;pseudo=true NZ_KK316784.1 Protein Homology CDS 1240152 1240922 . - 0 ID=cds-AL42_RS11435;Parent=gene-AL42_RS11435;Note=frameshifted;Ontology_term=GO:0009190,GO:0035556,GO:0009975,GO:0016849,GO:0032555,GO:0046872;gbkey=CDS;go_function=cyclase activity|0009975||IEA,phosphorus-oxygen lyase activity|0016849||IEA,purine ribonucleotide binding|0032555||IEA,metal ion binding|0046872||IEA;go_process=cyclic nucleotide biosynthetic process|0009190||IEA,intracellular signal transduction|0035556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020729832.1;locus_tag=AL42_RS11435;product=adenylate/guanylate cyclase domain-containing protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 1240995 1242395 . + . ID=gene-AL42_RS11440;Name=AL42_RS11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11440;old_locus_tag=AL42_01167 NZ_KK316784.1 Protein Homology CDS 1240995 1242395 . + 0 ID=cds-WP_003898735.1;Parent=gene-AL42_RS11440;Dbxref=GenBank:WP_003898735.1;Name=WP_003898735.1;Ontology_term=GO:0006006,GO:0004345;gbkey=CDS;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177789.1;locus_tag=AL42_RS11440;product=glucose-6-phosphate dehydrogenase;protein_id=WP_003898735.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1242417 1243439 . + . ID=gene-AL42_RS11445;Name=gnd;gbkey=Gene;gene=gnd;gene_biotype=protein_coding;locus_tag=AL42_RS11445;old_locus_tag=AL42_01168 NZ_KK316784.1 Protein Homology CDS 1242417 1243439 . + 0 ID=cds-WP_003405880.1;Parent=gene-AL42_RS11445;Dbxref=GenBank:WP_003405880.1;Name=WP_003405880.1;Ontology_term=GO:0006098,GO:0016616;gbkey=CDS;gene=gnd;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215638.1;locus_tag=AL42_RS11445;product=phosphogluconate dehydrogenase (NAD(+)-dependent%2C decarboxylating);protein_id=WP_003405880.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1243432 1244298 . - . ID=gene-AL42_RS11450;Name=bpoB;gbkey=Gene;gene=bpoB;gene_biotype=protein_coding;locus_tag=AL42_RS11450;old_locus_tag=AL42_01169 NZ_KK316784.1 Protein Homology CDS 1243432 1244298 . - 0 ID=cds-WP_003898736.1;Parent=gene-AL42_RS11450;Dbxref=GenBank:WP_003898736.1;Name=WP_003898736.1;gbkey=CDS;gene=bpoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898736.1;locus_tag=AL42_RS11450;product=alpha/beta fold hydrolase;protein_id=WP_003898736.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1244460 1245365 . + . ID=gene-AL42_RS11455;Name=ephC;gbkey=Gene;gene=ephC;gene_biotype=protein_coding;locus_tag=AL42_RS11455;old_locus_tag=AL42_01170 NZ_KK316784.1 Protein Homology CDS 1244460 1245365 . + 0 ID=cds-WP_003911402.1;Parent=gene-AL42_RS11455;Dbxref=GenBank:WP_003911402.1;Name=WP_003911402.1;gbkey=CDS;gene=ephC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911402.1;locus_tag=AL42_RS11455;product=alpha/beta fold hydrolase;protein_id=WP_003911402.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1245370 1246614 . + . ID=gene-AL42_RS11460;Name=AL42_RS11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11460;old_locus_tag=AL42_01171 NZ_KK316784.1 Protein Homology CDS 1245370 1246614 . + 0 ID=cds-WP_003901095.1;Parent=gene-AL42_RS11460;Dbxref=GenBank:WP_003901095.1;Name=WP_003901095.1;Ontology_term=GO:0004144;gbkey=CDS;go_function=diacylglycerol O-acyltransferase activity|0004144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215641.1;locus_tag=AL42_RS11460;product=WS/DGAT domain-containing protein;protein_id=WP_003901095.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1246618 1247223 . - . ID=gene-AL42_RS11465;Name=AL42_RS11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11465;old_locus_tag=AL42_01172 NZ_KK316784.1 Protein Homology CDS 1246618 1247223 . - 0 ID=cds-WP_003405892.1;Parent=gene-AL42_RS11465;Dbxref=GenBank:WP_003405892.1;Name=WP_003405892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215642.1;locus_tag=AL42_RS11465;product=hypothetical protein;protein_id=WP_003405892.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1247220 1248692 . - . ID=gene-AL42_RS11470;Name=ppdK;gbkey=Gene;gene=ppdK;gene_biotype=protein_coding;locus_tag=AL42_RS11470;old_locus_tag=AL42_01173 NZ_KK316784.1 Protein Homology CDS 1247220 1248692 . - 0 ID=cds-WP_003898737.1;Parent=gene-AL42_RS11470;Dbxref=GenBank:WP_003898737.1;Name=WP_003898737.1;gbkey=CDS;gene=ppdK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215643.1;locus_tag=AL42_RS11470;product=pyruvate%2C phosphate dikinase;protein_id=WP_003898737.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1248905 1250259 . - . ID=gene-AL42_RS0104550;Name=AL42_RS0104550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS0104550;old_locus_tag=AL42_01174;pseudo=true NZ_KK316784.1 Protein Homology CDS 1248905 1250259 . - 0 ID=cds-AL42_RS0104550;Parent=gene-AL42_RS0104550;Note=frameshifted;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: protein motif:HMM:NF014741.6;locus_tag=AL42_RS0104550;product=HNH endonuclease signature motif containing protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 1250361 1251821 . - . ID=gene-AL42_RS11475;Name=AL42_RS11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11475;old_locus_tag=AL42_01175 NZ_KK316784.1 Protein Homology CDS 1250361 1251821 . - 0 ID=cds-WP_003405904.1;Parent=gene-AL42_RS11475;Dbxref=GenBank:WP_003405904.1;Name=WP_003405904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215645.1;locus_tag=AL42_RS11475;product=short-chain fatty acyl-CoA regulator family protein;protein_id=WP_003405904.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1251917 1253422 . + . ID=gene-AL42_RS11480;Name=prpD;gbkey=Gene;gene=prpD;gene_biotype=protein_coding;locus_tag=AL42_RS11480;old_locus_tag=AL42_01176 NZ_KK316784.1 Protein Homology CDS 1251917 1253422 . + 0 ID=cds-WP_003405907.1;Parent=gene-AL42_RS11480;Dbxref=GenBank:WP_003405907.1;Name=WP_003405907.1;Ontology_term=GO:0047547;gbkey=CDS;gene=prpD;go_function=2-methylcitrate dehydratase activity|0047547||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015288002.1;locus_tag=AL42_RS11480;product=2-methylcitrate dehydratase PrpD;protein_id=WP_003405907.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1253419 1254600 . + . ID=gene-AL42_RS11485;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=AL42_RS11485;old_locus_tag=AL42_01177 NZ_KK316784.1 Protein Homology CDS 1253419 1254600 . + 0 ID=cds-WP_003405909.1;Parent=gene-AL42_RS11485;Dbxref=GenBank:WP_003405909.1;Name=WP_003405909.1;Ontology_term=GO:0006099,GO:0036440,GO:0050440;gbkey=CDS;gene=prpC;go_function=citrate synthase activity|0036440||IEA,2-methylcitrate synthase activity|0050440||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215647.1;locus_tag=AL42_RS11485;product=bifunctional 2-methylcitrate synthase/citrate synthase;protein_id=WP_003405909.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1254612 1256342 . + . ID=gene-AL42_RS11490;Name=AL42_RS11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11490;old_locus_tag=AL42_01178 NZ_KK316784.1 Protein Homology CDS 1254612 1256342 . + 0 ID=cds-WP_003405912.1;Parent=gene-AL42_RS11490;Dbxref=GenBank:WP_003405912.1;Name=WP_003405912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215648.1;locus_tag=AL42_RS11490;product=DUF3556 domain-containing protein;protein_id=WP_003405912.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1256354 1258633 . - . ID=gene-AL42_RS11495;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=AL42_RS11495;old_locus_tag=AL42_01179 NZ_KK316784.1 Protein Homology CDS 1256354 1258633 . - 0 ID=cds-WP_003405914.1;Parent=gene-AL42_RS11495;Dbxref=GenBank:WP_003405914.1;Name=WP_003405914.1;Ontology_term=GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215649.1;locus_tag=AL42_RS11495;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_003405914.1;transl_table=11 NZ_KK316784.1 cmsearch riboswitch 1258767 1259002 . - . ID=id-NZ_KK316784.1:1258767..1259002;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_KK316784.1 RefSeq gene 1259209 1259445 . + . ID=gene-AL42_RS11500;Name=AL42_RS11500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11500;old_locus_tag=AL42_01180 NZ_KK316784.1 Protein Homology CDS 1259209 1259445 . + 0 ID=cds-WP_003405917.1;Parent=gene-AL42_RS11500;Dbxref=GenBank:WP_003405917.1;Name=WP_003405917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215650.1;locus_tag=AL42_RS11500;product=hypothetical protein;protein_id=WP_003405917.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1259559 1260248 . - . ID=gene-AL42_RS0104555;Name=AL42_RS0104555;end_range=1260248,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS0104555;partial=true;pseudo=true NZ_KK316784.1 Protein Homology CDS 1259559 1260248 . - 0 ID=cds-AL42_RS0104555;Parent=gene-AL42_RS0104555;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1260248,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177790.1;locus_tag=AL42_RS0104555;partial=true;product=PPE family protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1260293 1261554 . - . ID=gene-AL42_RS11505;Name=AL42_RS11505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS11505;old_locus_tag=AL42_01181;pseudo=true NZ_KK316784.1 Protein Homology CDS 1260293 1261554 . - 0 ID=cds-AL42_RS11505;Parent=gene-AL42_RS11505;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL42_RS11505;product=IS3-like element IS6110/IS987 family transposase;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1261574 1262773 . - . ID=gene-AL42_RS11515;Name=AL42_RS11515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS11515;old_locus_tag=AL42_01183;partial=true;pseudo=true;start_range=.,1261574 NZ_KK316784.1 Protein Homology CDS 1261574 1262773 . - 0 ID=cds-AL42_RS11515;Parent=gene-AL42_RS11515;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177790.1;locus_tag=AL42_RS11515;partial=true;product=PPE family protein;pseudo=true;start_range=.,1261574;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1263037 1263201 . + . ID=gene-AL42_RS11520;Name=AL42_RS11520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS11520;old_locus_tag=AL42_01184;partial=true;pseudo=true;start_range=.,1263037 NZ_KK316784.1 Protein Homology CDS 1263037 1263201 . + 0 ID=cds-AL42_RS11520;Parent=gene-AL42_RS11520;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003920476.1;locus_tag=AL42_RS11520;partial=true;product=acetyl-CoA acetyltransferase;pseudo=true;start_range=.,1263037;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1263251 1263921 . + . ID=gene-AL42_RS27150;Name=AL42_RS27150;end_range=1263921,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS27150;partial=true;pseudo=true NZ_KK316784.1 Protein Homology CDS 1263251 1263921 . + 0 ID=cds-AL42_RS27150;Parent=gene-AL42_RS27150;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003824;end_range=1263921,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005147140.1;locus_tag=AL42_RS27150;partial=true;product=enoyl-CoA hydratase-related protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 1264117 1265133 . - . ID=gene-AL42_RS11530;Name=AL42_RS11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11530;old_locus_tag=AL42_01187 NZ_KK316784.1 Protein Homology CDS 1264117 1265133 . - 0 ID=cds-WP_003405932.1;Parent=gene-AL42_RS11530;Dbxref=GenBank:WP_003405932.1;Name=WP_003405932.1;Ontology_term=GO:0000166,GO:0016491,GO:0071949;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215654.1;locus_tag=AL42_RS11530;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_003405932.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1265130 1265630 . - . ID=gene-AL42_RS11535;Name=AL42_RS11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11535;old_locus_tag=AL42_01188 NZ_KK316784.1 Protein Homology CDS 1265130 1265630 . - 0 ID=cds-WP_003405935.1;Parent=gene-AL42_RS11535;Dbxref=GenBank:WP_003405935.1;Name=WP_003405935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215655.1;locus_tag=AL42_RS11535;product=isoprenylcysteine carboxyl methyltransferase family protein;protein_id=WP_003405935.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1266118 1266840 . + . ID=gene-AL42_RS11540;Name=AL42_RS11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11540;old_locus_tag=AL42_01189 NZ_KK316784.1 Protein Homology CDS 1266118 1266840 . + 0 ID=cds-WP_003911379.1;Parent=gene-AL42_RS11540;Dbxref=GenBank:WP_003911379.1;Name=WP_003911379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011724051.1;locus_tag=AL42_RS11540;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_003911379.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1266848 1267654 . - . ID=gene-AL42_RS11545;Name=AL42_RS11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11545;old_locus_tag=AL42_01190 NZ_KK316784.1 Protein Homology CDS 1266848 1267654 . - 0 ID=cds-WP_003405951.1;Parent=gene-AL42_RS11545;Dbxref=GenBank:WP_003405951.1;Name=WP_003405951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215657.1;locus_tag=AL42_RS11545;product=enoyl-CoA hydratase;protein_id=WP_003405951.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1267797 1268603 . - . ID=gene-AL42_RS11550;Name=AL42_RS11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11550;old_locus_tag=AL42_01191 NZ_KK316784.1 Protein Homology CDS 1267797 1268603 . - 0 ID=cds-WP_003405957.1;Parent=gene-AL42_RS11550;Dbxref=GenBank:WP_003405957.1;Name=WP_003405957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215658.1;locus_tag=AL42_RS11550;product=enoyl-CoA hydratase;protein_id=WP_003405957.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1268707 1269789 . + . ID=gene-AL42_RS11555;Name=mcr;gbkey=Gene;gene=mcr;gene_biotype=protein_coding;locus_tag=AL42_RS11555;old_locus_tag=AL42_01192 NZ_KK316784.1 Protein Homology CDS 1268707 1269789 . + 0 ID=cds-WP_003898740.1;Parent=gene-AL42_RS11555;Dbxref=GenBank:WP_003898740.1;Name=WP_003898740.1;gbkey=CDS;gene=mcr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215659.1;locus_tag=AL42_RS11555;product=alpha-methylacyl-CoA racemase;protein_id=WP_003898740.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1269801 1270553 . + . ID=gene-AL42_RS11560;Name=AL42_RS11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11560;old_locus_tag=AL42_01193 NZ_KK316784.1 Protein Homology CDS 1269801 1270553 . + 0 ID=cds-WP_003405961.1;Parent=gene-AL42_RS11560;Dbxref=GenBank:WP_003405961.1;Name=WP_003405961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215660.1;locus_tag=AL42_RS11560;product=3-hydroxyacyl-CoA dehydrogenase;protein_id=WP_003405961.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1270681 1270812 . - . ID=gene-AL42_RS27840;Name=AL42_RS27840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27840;old_locus_tag=AL42_01194 NZ_KK316784.1 Protein Homology CDS 1270681 1270812 . - 0 ID=cds-WP_003405966.1;Parent=gene-AL42_RS27840;Dbxref=GenBank:WP_003405966.1;Name=WP_003405966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003405966.1;locus_tag=AL42_RS27840;product=hypothetical protein;protein_id=WP_003405966.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1271068 1273413 . + . ID=gene-AL42_RS0104575;Name=AL42_RS0104575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0104575 NZ_KK316784.1 Protein Homology CDS 1271068 1273413 . + 0 ID=cds-WP_003405970.1;Parent=gene-AL42_RS0104575;Dbxref=GenBank:WP_003405970.1;Name=WP_003405970.1;Ontology_term=GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015629850.1;locus_tag=AL42_RS0104575;product=MMPL family transporter;protein_id=WP_003405970.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1273546 1274196 . + . ID=gene-AL42_RS11565;Name=AL42_RS11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11565;old_locus_tag=AL42_01197 NZ_KK316784.1 Protein Homology CDS 1273546 1274196 . + 0 ID=cds-WP_003405982.1;Parent=gene-AL42_RS11565;Dbxref=GenBank:WP_003405982.1;Name=WP_003405982.1;Ontology_term=GO:0008757;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215663.1;locus_tag=AL42_RS11565;product=class I SAM-dependent methyltransferase;protein_id=WP_003405982.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1274571 1274672 . + . ID=gene-AL42_RS27570;Name=AL42_RS27570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS27570;partial=true;pseudo=true;start_range=.,1274571 NZ_KK316784.1 Protein Homology CDS 1274571 1274672 . + 0 ID=cds-AL42_RS27570;Parent=gene-AL42_RS27570;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216464.1;locus_tag=AL42_RS27570;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1274571;transl_table=11 NZ_KK316784.1 RefSeq gene 1274674 1274949 . - . ID=gene-AL42_RS27575;Name=AL42_RS27575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27575 NZ_KK316784.1 Protein Homology CDS 1274674 1274949 . - 0 ID=cds-WP_003405990.1;Parent=gene-AL42_RS27575;Dbxref=GenBank:WP_003405990.1;Name=WP_003405990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003405990.1;locus_tag=AL42_RS27575;product=hypothetical protein;protein_id=WP_003405990.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1274946 1276310 . - . ID=gene-AL42_RS11570;Name=AL42_RS11570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11570;old_locus_tag=AL42_01198 NZ_KK316784.1 Protein Homology CDS 1274946 1276310 . - 0 ID=cds-WP_031712807.1;Parent=gene-AL42_RS11570;Dbxref=GenBank:WP_031712807.1;Name=WP_031712807.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216461.1;locus_tag=AL42_RS11570;product=HNH endonuclease signature motif containing protein;protein_id=WP_031712807.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1276539 1277466 . + . ID=gene-AL42_RS25710;Name=AL42_RS25710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS25710;old_locus_tag=AL42_01199;pseudo=true NZ_KK316784.1 Protein Homology CDS 1276539 1277466 . + 0 ID=cds-AL42_RS25710;Parent=gene-AL42_RS25710;Note=frameshifted;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612358.1;locus_tag=AL42_RS25710;product=IS5-like element ISMt1 family transposase;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 1277550 1278263 . - . ID=gene-AL42_RS11575;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=AL42_RS11575;old_locus_tag=AL42_01200 NZ_KK316784.1 Protein Homology CDS 1277550 1278263 . - 0 ID=cds-WP_003406044.1;Parent=gene-AL42_RS11575;Dbxref=GenBank:WP_003406044.1;Name=WP_003406044.1;gbkey=CDS;gene=cobB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215667.1;locus_tag=AL42_RS11575;product=NAD-dependent protein deacylase;protein_id=WP_003406044.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1278301 1278666 . + . ID=gene-AL42_RS11580;Name=AL42_RS11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11580;old_locus_tag=AL42_01201 NZ_KK316784.1 Protein Homology CDS 1278301 1278666 . + 0 ID=cds-WP_003406047.1;Parent=gene-AL42_RS11580;Dbxref=GenBank:WP_003406047.1;Name=WP_003406047.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215668.1;locus_tag=AL42_RS11580;product=Rv1152 family transcriptional regulator;protein_id=WP_003406047.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1278644 1279492 . - . ID=gene-AL42_RS11585;Name=omt;gbkey=Gene;gene=omt;gene_biotype=protein_coding;locus_tag=AL42_RS11585;old_locus_tag=AL42_01202 NZ_KK316784.1 Protein Homology CDS 1278644 1279492 . - 0 ID=cds-WP_003898744.1;Parent=gene-AL42_RS11585;Dbxref=GenBank:WP_003898744.1;Name=WP_003898744.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;gene=omt;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215669.1;locus_tag=AL42_RS11585;product=class I SAM-dependent methyltransferase;protein_id=WP_003898744.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1279489 1280019 . - . ID=gene-AL42_RS11590;Name=AL42_RS11590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11590;old_locus_tag=AL42_01203 NZ_KK316784.1 Protein Homology CDS 1279489 1280019 . - 0 ID=cds-WP_023637376.1;Parent=gene-AL42_RS11590;Dbxref=GenBank:WP_023637376.1;Name=WP_023637376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012395864.1;locus_tag=AL42_RS11590;product=DUF1697 domain-containing protein;protein_id=WP_023637376.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1280075 1280518 . + . ID=gene-AL42_RS11595;Name=AL42_RS11595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11595;old_locus_tag=AL42_01204 NZ_KK316784.1 Protein Homology CDS 1280075 1280518 . + 0 ID=cds-WP_003406060.1;Parent=gene-AL42_RS11595;Dbxref=GenBank:WP_003406060.1;Name=WP_003406060.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215671.1;locus_tag=AL42_RS11595;product=PPOX class F420-dependent oxidoreductase;protein_id=WP_003406060.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1280676 1280864 . + . ID=gene-AL42_RS0104600;Name=AL42_RS0104600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0104600 NZ_KK316784.1 Protein Homology CDS 1280676 1280864 . + 0 ID=cds-WP_003406063.1;Parent=gene-AL42_RS0104600;Dbxref=GenBank:WP_003406063.1;Name=WP_003406063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030031.1;locus_tag=AL42_RS0104600;product=DUF5302 domain-containing protein;protein_id=WP_003406063.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1280952 1281539 . + . ID=gene-AL42_RS11600;Name=AL42_RS11600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11600;old_locus_tag=AL42_01205 NZ_KK316784.1 Protein Homology CDS 1280952 1281539 . + 0 ID=cds-WP_003406064.1;Parent=gene-AL42_RS11600;Dbxref=GenBank:WP_003406064.1;Name=WP_003406064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215672.1;locus_tag=AL42_RS11600;product=HhH-GPD-type base excision DNA repair protein;protein_id=WP_003406064.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1281536 1281682 . + . ID=gene-AL42_RS25715;Name=AL42_RS25715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS25715 NZ_KK316784.1 Protein Homology CDS 1281536 1281682 . + 0 ID=cds-WP_003406065.1;Parent=gene-AL42_RS25715;Dbxref=GenBank:WP_003406065.1;Name=WP_003406065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007169078.1;locus_tag=AL42_RS25715;product=hypothetical protein;protein_id=WP_003406065.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1281702 1282817 . - . ID=gene-AL42_RS11605;Name=AL42_RS11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11605;old_locus_tag=AL42_01206 NZ_KK316784.1 Protein Homology CDS 1281702 1282817 . - 0 ID=cds-WP_003406066.1;Parent=gene-AL42_RS11605;Dbxref=GenBank:WP_003406066.1;Name=WP_003406066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215673.1;locus_tag=AL42_RS11605;product=Rv1157c family protein;protein_id=WP_003406066.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1282825 1283508 . - . ID=gene-AL42_RS11610;Name=AL42_RS11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11610;old_locus_tag=AL42_01207 NZ_KK316784.1 Protein Homology CDS 1282825 1283508 . - 0 ID=cds-WP_003406075.1;Parent=gene-AL42_RS11610;Dbxref=GenBank:WP_003406075.1;Name=WP_003406075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215674.1;locus_tag=AL42_RS11610;product=hypothetical protein;protein_id=WP_003406075.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1283638 1284933 . + . ID=gene-AL42_RS11615;Name=pimE;gbkey=Gene;gene=pimE;gene_biotype=protein_coding;locus_tag=AL42_RS11615;old_locus_tag=AL42_01208 NZ_KK316784.1 Protein Homology CDS 1283638 1284933 . + 0 ID=cds-WP_003902013.1;Parent=gene-AL42_RS11615;Dbxref=GenBank:WP_003902013.1;Name=WP_003902013.1;gbkey=CDS;gene=pimE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215675.1;locus_tag=AL42_RS11615;product=mannosyltransferase;protein_id=WP_003902013.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1284930 1285214 . - . ID=gene-AL42_RS11620;Name=AL42_RS11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11620;old_locus_tag=AL42_01209 NZ_KK316784.1 Protein Homology CDS 1284930 1285214 . - 0 ID=cds-WP_003406082.1;Parent=gene-AL42_RS11620;Dbxref=GenBank:WP_003406082.1;Name=WP_003406082.1;Ontology_term=GO:0006729,GO:0008124;gbkey=CDS;go_function=4-alpha-hydroxytetrahydrobiopterin dehydratase activity|0008124||IEA;go_process=tetrahydrobiopterin biosynthetic process|0006729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177641.1;locus_tag=AL42_RS11620;product=4a-hydroxytetrahydrobiopterin dehydratase;protein_id=WP_003406082.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1285241 1285666 . + . ID=gene-AL42_RS11625;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=AL42_RS11625;old_locus_tag=AL42_01210 NZ_KK316784.1 Protein Homology CDS 1285241 1285666 . + 0 ID=cds-WP_003905474.1;Parent=gene-AL42_RS11625;Dbxref=GenBank:WP_003905474.1;Name=WP_003905474.1;gbkey=CDS;gene=mutT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215676.1;locus_tag=AL42_RS11625;product=(deoxy)nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_003905474.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1285974 1289672 . + . ID=gene-AL42_RS11630;Name=narG;gbkey=Gene;gene=narG;gene_biotype=protein_coding;locus_tag=AL42_RS11630;old_locus_tag=AL42_01211 NZ_KK316784.1 Protein Homology CDS 1285974 1289672 . + 0 ID=cds-WP_003898748.1;Parent=gene-AL42_RS11630;Dbxref=GenBank:WP_003898748.1;Name=WP_003898748.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narG;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215677.1;locus_tag=AL42_RS11630;product=nitrate reductase subunit alpha;protein_id=WP_003898748.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1289711 1291387 . + . ID=gene-AL42_RS11635;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=AL42_RS11635;old_locus_tag=AL42_01212 NZ_KK316784.1 Protein Homology CDS 1289711 1291387 . + 0 ID=cds-WP_003406090.1;Parent=gene-AL42_RS11635;Dbxref=GenBank:WP_003406090.1;Name=WP_003406090.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898749.1;locus_tag=AL42_RS11635;product=nitrate reductase subunit beta;protein_id=WP_003406090.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1291384 1292049 . + . ID=gene-AL42_RS11640;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=AL42_RS11640;old_locus_tag=AL42_01213 NZ_KK316784.1 Protein Homology CDS 1291384 1292049 . + 0 ID=cds-WP_014584726.1;Parent=gene-AL42_RS11640;Dbxref=GenBank:WP_014584726.1;Name=WP_014584726.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911426.1;locus_tag=AL42_RS11640;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_014584726.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1292052 1292792 . + . ID=gene-AL42_RS11645;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=AL42_RS11645;old_locus_tag=AL42_01214 NZ_KK316784.1 Protein Homology CDS 1292052 1292792 . + 0 ID=cds-WP_003406095.1;Parent=gene-AL42_RS11645;Dbxref=GenBank:WP_003406095.1;Name=WP_003406095.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215680.1;locus_tag=AL42_RS11645;product=respiratory nitrate reductase subunit gamma;protein_id=WP_003406095.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1292814 1294700 . + . ID=gene-AL42_RS11650;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=AL42_RS11650;old_locus_tag=AL42_01215 NZ_KK316784.1 Protein Homology CDS 1292814 1294700 . + 0 ID=cds-WP_003406099.1;Parent=gene-AL42_RS11650;Dbxref=GenBank:WP_003406099.1;Name=WP_003406099.1;Ontology_term=GO:0006412,GO:0006950,GO:0003924,GO:0005525;gbkey=CDS;gene=typA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215681.1;locus_tag=AL42_RS11650;product=translational GTPase TypA;protein_id=WP_003406099.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1294798 1296705 . + . ID=gene-AL42_RS11655;Name=lpqW;gbkey=Gene;gene=lpqW;gene_biotype=protein_coding;locus_tag=AL42_RS11655;old_locus_tag=AL42_01216 NZ_KK316784.1 Protein Homology CDS 1294798 1296705 . + 0 ID=cds-WP_003406102.1;Parent=gene-AL42_RS11655;Dbxref=GenBank:WP_003406102.1;Name=WP_003406102.1;gbkey=CDS;gene=lpqW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215682.1;locus_tag=AL42_RS11655;product=lipoarabinomannan biosynthesis protein LpqW;protein_id=WP_003406102.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1296733 1297338 . - . ID=gene-AL42_RS11660;Name=AL42_RS11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11660;old_locus_tag=AL42_01217 NZ_KK316784.1 Protein Homology CDS 1296733 1297338 . - 0 ID=cds-WP_003406104.1;Parent=gene-AL42_RS11660;Dbxref=GenBank:WP_003406104.1;Name=WP_003406104.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215683.1;locus_tag=AL42_RS11660;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003406104.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1297410 1298450 . - . ID=gene-AL42_RS11665;Name=AL42_RS11665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11665;old_locus_tag=AL42_01218 NZ_KK316784.1 Protein Homology CDS 1297410 1298450 . - 0 ID=cds-WP_003902014.1;Parent=gene-AL42_RS11665;Dbxref=GenBank:WP_003902014.1;Name=WP_003902014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177791.1;locus_tag=AL42_RS11665;product=PPE family protein;protein_id=WP_003902014.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1298468 1298770 . - . ID=gene-AL42_RS11670;Name=lipX;gbkey=Gene;gene=lipX;gene_biotype=protein_coding;gene_synonym=PE11;locus_tag=AL42_RS11670;old_locus_tag=AL42_01219 NZ_KK316784.1 Protein Homology CDS 1298468 1298770 . - 0 ID=cds-WP_003898752.1;Parent=gene-AL42_RS11670;Dbxref=GenBank:WP_003898752.1;Name=WP_003898752.1;gbkey=CDS;gene=lipX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177792.1;locus_tag=AL42_RS11670;product=lipase/esterase LipX;protein_id=WP_003898752.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1298950 1299861 . + . ID=gene-AL42_RS11675;Name=mshB;gbkey=Gene;gene=mshB;gene_biotype=protein_coding;locus_tag=AL42_RS11675;old_locus_tag=AL42_01220 NZ_KK316784.1 Protein Homology CDS 1298950 1299861 . + 0 ID=cds-WP_003406154.1;Parent=gene-AL42_RS11675;Dbxref=GenBank:WP_003406154.1;Name=WP_003406154.1;Ontology_term=GO:0010125,GO:0035595;gbkey=CDS;gene=mshB;go_function=N-acetylglucosaminylinositol deacetylase activity|0035595||IEA;go_process=mycothiol biosynthetic process|0010125||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215686.1;locus_tag=AL42_RS11675;product=N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase;protein_id=WP_003406154.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1299953 1300393 . + . ID=gene-AL42_RS11680;Name=AL42_RS11680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11680;old_locus_tag=AL42_01221 NZ_KK316784.1 Protein Homology CDS 1299953 1300393 . + 0 ID=cds-WP_003406163.1;Parent=gene-AL42_RS11680;Dbxref=GenBank:WP_003406163.1;Name=WP_003406163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215687.2;locus_tag=AL42_RS11680;product=hypothetical protein;protein_id=WP_003406163.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1300401 1301327 . - . ID=gene-AL42_RS11685;Name=AL42_RS11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11685;old_locus_tag=AL42_01222 NZ_KK316784.1 Protein Homology CDS 1300401 1301327 . - 0 ID=cds-WP_003898753.1;Parent=gene-AL42_RS11685;Dbxref=GenBank:WP_003898753.1;Name=WP_003898753.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177793.1;locus_tag=AL42_RS11685;product=PE family protein;protein_id=WP_003898753.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1301577 1304147 . + . ID=gene-AL42_RS11690;Name=fbiC;gbkey=Gene;gene=fbiC;gene_biotype=protein_coding;locus_tag=AL42_RS11690;old_locus_tag=AL42_01223 NZ_KK316784.1 Protein Homology CDS 1301577 1304147 . + 0 ID=cds-WP_003406167.1;Parent=gene-AL42_RS11690;Dbxref=GenBank:WP_003406167.1;Name=WP_003406167.1;Ontology_term=GO:0016765,GO:0051539;gbkey=CDS;gene=fbiC;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215689.1;locus_tag=AL42_RS11690;product=bifunctional FO biosynthesis protein CofGH;protein_id=WP_003406167.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1304253 1304585 . - . ID=gene-AL42_RS11695;Name=AL42_RS11695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11695;old_locus_tag=AL42_01224 NZ_KK316784.1 Protein Homology CDS 1304253 1304585 . - 0 ID=cds-WP_003406169.1;Parent=gene-AL42_RS11695;Dbxref=GenBank:WP_003406169.1;Name=WP_003406169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215690.1;locus_tag=AL42_RS11695;product=hemophore-related protein;protein_id=WP_003406169.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1304786 1306810 . - . ID=gene-AL42_RS11700;Name=fadH;gbkey=Gene;gene=fadH;gene_biotype=protein_coding;locus_tag=AL42_RS11700;old_locus_tag=AL42_01225 NZ_KK316784.1 Protein Homology CDS 1304786 1306810 . - 0 ID=cds-WP_003898755.1;Parent=gene-AL42_RS11700;Dbxref=GenBank:WP_003898755.1;Name=WP_003898755.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fadH;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215691.1;locus_tag=AL42_RS11700;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WP_003898755.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1306807 1307376 . - . ID=gene-AL42_RS11705;Name=AL42_RS11705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11705;old_locus_tag=AL42_01226 NZ_KK316784.1 Protein Homology CDS 1306807 1307376 . - 0 ID=cds-WP_003406182.1;Parent=gene-AL42_RS11705;Dbxref=GenBank:WP_003406182.1;Name=WP_003406182.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215692.1;locus_tag=AL42_RS11705;product=PadR family transcriptional regulator;protein_id=WP_003406182.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1307589 1307915 . + . ID=gene-AL42_RS11710;Name=fdxA;gbkey=Gene;gene=fdxA;gene_biotype=protein_coding;locus_tag=AL42_RS11710;old_locus_tag=AL42_01227 NZ_KK316784.1 Protein Homology CDS 1307589 1307915 . + 0 ID=cds-WP_003406185.1;Parent=gene-AL42_RS11710;Dbxref=GenBank:WP_003406185.1;Name=WP_003406185.1;Ontology_term=GO:0009055,GO:0046872;gbkey=CDS;gene=fdxA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215693.1;locus_tag=AL42_RS11710;product=ferredoxin;protein_id=WP_003406185.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1307948 1309036 . + . ID=gene-AL42_RS11715;Name=dapC;gbkey=Gene;gene=dapC;gene_biotype=protein_coding;locus_tag=AL42_RS11715;old_locus_tag=AL42_01228 NZ_KK316784.1 Protein Homology CDS 1307948 1309036 . + 0 ID=cds-WP_003898756.1;Parent=gene-AL42_RS11715;Dbxref=GenBank:WP_003898756.1;Name=WP_003898756.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=dapC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215694.1;locus_tag=AL42_RS11715;product=succinyldiaminopimelate transaminase;protein_id=WP_003898756.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1309064 1311883 . - . ID=gene-AL42_RS11720;Name=AL42_RS11720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11720;old_locus_tag=AL42_01229 NZ_KK316784.1 Protein Homology CDS 1309064 1311883 . - 0 ID=cds-WP_003406189.1;Parent=gene-AL42_RS11720;Dbxref=GenBank:WP_003406189.1;Name=WP_003406189.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215695.1;locus_tag=AL42_RS11720;product=DEAD/DEAH box helicase family protein;protein_id=WP_003406189.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1312310 1318567 . + . ID=gene-AL42_RS11725;Name=pks2;gbkey=Gene;gene=pks2;gene_biotype=protein_coding;locus_tag=AL42_RS11725;old_locus_tag=AL42_01230 NZ_KK316784.1 Protein Homology CDS 1312310 1318567 . + 0 ID=cds-WP_003406192.1;Parent=gene-AL42_RS11725;Dbxref=GenBank:WP_003406192.1;Name=WP_003406192.1;gbkey=CDS;gene=pks2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011799162.1;locus_tag=AL42_RS11725;product=sulfolipid-1 biosynthesis phthioceranic/hydroxyphthioceranic acid synthase;protein_id=WP_003406192.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1318620 1320038 . + . ID=gene-AL42_RS11730;Name=papA3;gbkey=Gene;gene=papA3;gene_biotype=protein_coding;locus_tag=AL42_RS11730;old_locus_tag=AL42_01231 NZ_KK316784.1 Protein Homology CDS 1318620 1320038 . + 0 ID=cds-WP_003898759.1;Parent=gene-AL42_RS11730;Dbxref=GenBank:WP_003898759.1;Name=WP_003898759.1;gbkey=CDS;gene=papA3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215698.1;locus_tag=AL42_RS11730;product=acyltransferase PapA3;protein_id=WP_003898759.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1320060 1323113 . + . ID=gene-AL42_RS11735;Name=mmpL10;gbkey=Gene;gene=mmpL10;gene_biotype=protein_coding;locus_tag=AL42_RS11735;old_locus_tag=AL42_01232 NZ_KK316784.1 Protein Homology CDS 1320060 1323113 . + 0 ID=cds-WP_256388736.1;Parent=gene-AL42_RS11735;Dbxref=GenBank:WP_256388736.1;Name=WP_256388736.1;gbkey=CDS;gene=mmpL10;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003889070.1;locus_tag=AL42_RS11735;product=RND transporter MmpL10;protein_id=WP_256388736.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1323117 1324196 . - . ID=gene-AL42_RS11740;Name=chp2;gbkey=Gene;gene=chp2;gene_biotype=protein_coding;locus_tag=AL42_RS11740;old_locus_tag=AL42_01233 NZ_KK316784.1 Protein Homology CDS 1323117 1324196 . - 0 ID=cds-WP_003406195.1;Parent=gene-AL42_RS11740;Dbxref=GenBank:WP_003406195.1;Name=WP_003406195.1;gbkey=CDS;gene=chp2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215700.1;locus_tag=AL42_RS11740;product=diacyltrehalose acyltransferase Chp2;protein_id=WP_003406195.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1324361 1326097 . - . ID=gene-AL42_RS11745;Name=fadD21;gbkey=Gene;gene=fadD21;gene_biotype=protein_coding;locus_tag=AL42_RS11745;old_locus_tag=AL42_01234 NZ_KK316784.1 Protein Homology CDS 1324361 1326097 . - 0 ID=cds-WP_003406196.1;Parent=gene-AL42_RS11745;Dbxref=GenBank:WP_003406196.1;Name=WP_003406196.1;gbkey=CDS;gene=fadD21;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215701.1;locus_tag=AL42_RS11745;product=fatty-acid--AMP ligase FAAL21/FadD21;protein_id=WP_003406196.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1326274 1327890 . - . ID=gene-AL42_RS11750;Name=AL42_RS11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11750;old_locus_tag=AL42_01235 NZ_KK316784.1 Protein Homology CDS 1326274 1327890 . - 0 ID=cds-WP_003406197.1;Parent=gene-AL42_RS11750;Dbxref=GenBank:WP_003406197.1;Name=WP_003406197.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215702.1;locus_tag=AL42_RS11750;product=PucR family transcriptional regulator;protein_id=WP_003406197.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1327975 1329606 . + . ID=gene-AL42_RS11755;Name=pruA;gbkey=Gene;gene=pruA;gene_biotype=protein_coding;locus_tag=AL42_RS11755;old_locus_tag=AL42_01236 NZ_KK316784.1 Protein Homology CDS 1327975 1329606 . + 0 ID=cds-WP_003900286.1;Parent=gene-AL42_RS11755;Dbxref=GenBank:WP_003900286.1;Name=WP_003900286.1;Ontology_term=GO:0010133,GO:0003842;gbkey=CDS;gene=pruA;go_function=L-glutamate gamma-semialdehyde dehydrogenase activity|0003842||IEA;go_process=L-proline catabolic process to L-glutamate|0010133||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215703.1;locus_tag=AL42_RS11755;product=L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_003900286.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1329606 1330595 . + . ID=gene-AL42_RS11760;Name=AL42_RS11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11760;old_locus_tag=AL42_01237 NZ_KK316784.1 Protein Homology CDS 1329606 1330595 . + 0 ID=cds-WP_003900287.1;Parent=gene-AL42_RS11760;Dbxref=GenBank:WP_003900287.1;Name=WP_003900287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215704.1;locus_tag=AL42_RS11760;product=proline dehydrogenase family protein;protein_id=WP_003900287.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1330677 1331549 . + . ID=gene-AL42_RS11765;Name=sigI;gbkey=Gene;gene=sigI;gene_biotype=protein_coding;locus_tag=AL42_RS11765;old_locus_tag=AL42_01238 NZ_KK316784.1 Protein Homology CDS 1330677 1331549 . + 0 ID=cds-WP_003406207.1;Parent=gene-AL42_RS11765;Dbxref=GenBank:WP_003406207.1;Name=WP_003406207.1;gbkey=CDS;gene=sigI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215705.1;locus_tag=AL42_RS11765;product=RNA polymerase sigma factor SigI;protein_id=WP_003406207.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1331565 1332443 . + . ID=gene-AL42_RS11770;Name=AL42_RS11770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11770;old_locus_tag=AL42_01239 NZ_KK316784.1 Protein Homology CDS 1331565 1332443 . + 0 ID=cds-WP_003406212.1;Parent=gene-AL42_RS11770;Dbxref=GenBank:WP_003406212.1;Name=WP_003406212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215706.1;locus_tag=AL42_RS11770;product=alpha/beta fold hydrolase;protein_id=WP_003406212.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1332516 1333430 . + . ID=gene-AL42_RS11775;Name=AL42_RS11775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11775;old_locus_tag=AL42_01240 NZ_KK316784.1 Protein Homology CDS 1332516 1333430 . + 0 ID=cds-WP_003406215.1;Parent=gene-AL42_RS11775;Dbxref=GenBank:WP_003406215.1;Name=WP_003406215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215707.1;locus_tag=AL42_RS11775;product=alpha/beta fold hydrolase;protein_id=WP_003406215.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1333512 1334339 . + . ID=gene-AL42_RS11780;Name=AL42_RS11780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11780;old_locus_tag=AL42_01241 NZ_KK316784.1 Protein Homology CDS 1333512 1334339 . + 0 ID=cds-WP_003898763.1;Parent=gene-AL42_RS11780;Dbxref=GenBank:WP_003898763.1;Name=WP_003898763.1;Ontology_term=GO:0016042,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215708.1;locus_tag=AL42_RS11780;product=esterase/lipase family protein;protein_id=WP_003898763.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1334379 1335800 . + . ID=gene-AL42_RS11785;Name=AL42_RS11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11785;old_locus_tag=AL42_01242 NZ_KK316784.1 Protein Homology CDS 1334379 1335800 . + 0 ID=cds-WP_003905485.1;Parent=gene-AL42_RS11785;Dbxref=GenBank:WP_003905485.1;Name=WP_003905485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215709.1;locus_tag=AL42_RS11785;product=acyl-CoA synthetase;protein_id=WP_003905485.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1335833 1337098 . - . ID=gene-AL42_RS11790;Name=AL42_RS11790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11790;old_locus_tag=AL42_01243 NZ_KK316784.1 Protein Homology CDS 1335833 1337098 . - 0 ID=cds-WP_003406219.1;Parent=gene-AL42_RS11790;Dbxref=GenBank:WP_003406219.1;Name=WP_003406219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215710.1;locus_tag=AL42_RS11790;product=Rv1453 family transcriptional regulator;protein_id=WP_003406219.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1337588 1337887 . + . ID=gene-AL42_RS11795;Name=AL42_RS11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11795;old_locus_tag=AL42_01244 NZ_KK316784.1 Protein Homology CDS 1337588 1337887 . + 0 ID=cds-WP_003406222.1;Parent=gene-AL42_RS11795;Dbxref=GenBank:WP_003406222.1;Name=WP_003406222.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177794.1;locus_tag=AL42_RS11795;product=PE family protein;protein_id=WP_003406222.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1337934 1339109 . + . ID=gene-AL42_RS11800;Name=AL42_RS11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11800;old_locus_tag=AL42_01245 NZ_KK316784.1 Protein Homology CDS 1337934 1339109 . + 0 ID=cds-WP_003902024.1;Parent=gene-AL42_RS11800;Dbxref=GenBank:WP_003902024.1;Name=WP_003902024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177795.1;locus_tag=AL42_RS11800;product=PPE family protein PPE18;protein_id=WP_003902024.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1339244 1339540 . + . ID=gene-AL42_RS11805;Name=esxJ;gbkey=Gene;gene=esxJ;gene_biotype=protein_coding;locus_tag=AL42_RS11805;old_locus_tag=AL42_01246 NZ_KK316784.1 Protein Homology CDS 1339244 1339540 . + 0 ID=cds-WP_003421604.1;Parent=gene-AL42_RS11805;Dbxref=GenBank:WP_003421604.1;Name=WP_003421604.1;gbkey=CDS;gene=esxJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215713.1;locus_tag=AL42_RS11805;product=type VII secretion system ESX-5 protein EsxJ;protein_id=WP_003421604.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1339591 1339875 . + . ID=gene-AL42_RS11810;Name=esxL;gbkey=Gene;gene=esxL;gene_biotype=protein_coding;locus_tag=AL42_RS11810;old_locus_tag=AL42_01247 NZ_KK316784.1 Protein Homology CDS 1339591 1339875 . + 0 ID=cds-WP_003898766.1;Parent=gene-AL42_RS11810;Dbxref=GenBank:WP_003898766.1;Name=WP_003898766.1;gbkey=CDS;gene=esxL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215714.1;locus_tag=AL42_RS11810;product=type VII secretion system ESX-5 protein EsxL;protein_id=WP_003898766.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1339943 1341190 . - . ID=gene-AL42_RS11815;Name=AL42_RS11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11815;old_locus_tag=AL42_01248 NZ_KK316784.1 Protein Homology CDS 1339943 1341190 . - 0 ID=cds-WP_003901078.1;Parent=gene-AL42_RS11815;Dbxref=GenBank:WP_003901078.1;Name=WP_003901078.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215563.1;locus_tag=AL42_RS11815;product=IS256-like element IS1081 family transposase;protein_id=WP_003901078.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1341527 1342804 . + . ID=gene-AL42_RS11820;Name=AL42_RS11820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11820;old_locus_tag=AL42_01249 NZ_KK316784.1 Protein Homology CDS 1341527 1342804 . + 0 ID=cds-WP_003406233.1;Parent=gene-AL42_RS11820;Dbxref=GenBank:WP_003406233.1;Name=WP_003406233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215716.1;locus_tag=AL42_RS11820;product=MHS family MFS transporter;protein_id=WP_003406233.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1342801 1343754 . - . ID=gene-AL42_RS11825;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=AL42_RS11825;old_locus_tag=AL42_01250 NZ_KK316784.1 Protein Homology CDS 1342801 1343754 . - 0 ID=cds-WP_003898768.1;Parent=gene-AL42_RS11825;Dbxref=GenBank:WP_003898768.1;Name=WP_003898768.1;Ontology_term=GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215717.1;locus_tag=AL42_RS11825;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_003898768.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1343845 1344909 . + . ID=gene-AL42_RS11830;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=AL42_RS11830;old_locus_tag=AL42_01251 NZ_KK316784.1 Protein Homology CDS 1343845 1344909 . + 0 ID=cds-WP_003406235.1;Parent=gene-AL42_RS11830;Dbxref=GenBank:WP_003406235.1;Name=WP_003406235.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177796.1;locus_tag=AL42_RS11830;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_003406235.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1344906 1347209 . - . ID=gene-AL42_RS11840;Name=AL42_RS11840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS11840;old_locus_tag=AL42_01253;pseudo=true NZ_KK316784.1 Protein Homology CDS 1344906 1347209 . - 0 ID=cds-AL42_RS11840;Parent=gene-AL42_RS11840;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015289657.1;locus_tag=AL42_RS11840;product=AAA family ATPase;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 1347304 1347867 . + . ID=gene-AL42_RS11845;Name=AL42_RS11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11845;old_locus_tag=AL42_01254 NZ_KK316784.1 Protein Homology CDS 1347304 1347867 . + 0 ID=cds-WP_003898770.1;Parent=gene-AL42_RS11845;Dbxref=GenBank:WP_003898770.1;Name=WP_003898770.1;Ontology_term=GO:0009691,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=cytokinin biosynthetic process|0009691||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215721.1;locus_tag=AL42_RS11845;product=LOG family protein;protein_id=WP_003898770.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1347917 1349710 . + . ID=gene-AL42_RS11850;Name=fadD6;gbkey=Gene;gene=fadD6;gene_biotype=protein_coding;locus_tag=AL42_RS11850;old_locus_tag=AL42_01255 NZ_KK316784.1 Protein Homology CDS 1347917 1349710 . + 0 ID=cds-WP_003905502.1;Parent=gene-AL42_RS11850;Dbxref=GenBank:WP_003905502.1;Name=WP_003905502.1;gbkey=CDS;gene=fadD6;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215722.1;locus_tag=AL42_RS11850;product=long-chain-acyl-CoA synthetase FadD6;protein_id=WP_003905502.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1349776 1350732 . + . ID=gene-AL42_RS11860;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=AL42_RS11860;old_locus_tag=AL42_01256 NZ_KK316784.1 Protein Homology CDS 1349776 1350732 . + 0 ID=cds-WP_003406241.1;Parent=gene-AL42_RS11860;Dbxref=GenBank:WP_003406241.1;Name=WP_003406241.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215723.1;locus_tag=AL42_RS11860;product=dihydropteroate synthase;protein_id=WP_003406241.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1350729 1351703 . + . ID=gene-AL42_RS11865;Name=gpgS;gbkey=Gene;gene=gpgS;gene_biotype=protein_coding;locus_tag=AL42_RS11865;old_locus_tag=AL42_01257 NZ_KK316784.1 Protein Homology CDS 1350729 1351703 . + 0 ID=cds-WP_003406242.1;Parent=gene-AL42_RS11865;Dbxref=GenBank:WP_003406242.1;Name=WP_003406242.1;gbkey=CDS;gene=gpgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215724.1;locus_tag=AL42_RS11865;product=glucosyl-3-phosphoglycerate synthase;protein_id=WP_003406242.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1351742 1352110 . + . ID=gene-AL42_RS11870;Name=AL42_RS11870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11870;old_locus_tag=AL42_01258 NZ_KK316784.1 Protein Homology CDS 1351742 1352110 . + 0 ID=cds-WP_003406243.1;Parent=gene-AL42_RS11870;Dbxref=GenBank:WP_003406243.1;Name=WP_003406243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215725.1;locus_tag=AL42_RS11870;product=DivIVA domain-containing protein;protein_id=WP_003406243.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1352107 1352721 . + . ID=gene-AL42_RS11875;Name=tagA;gbkey=Gene;gene=tagA;gene_biotype=protein_coding;locus_tag=AL42_RS11875;old_locus_tag=AL42_01259 NZ_KK316784.1 Protein Homology CDS 1352107 1352721 . + 0 ID=cds-WP_003406244.1;Parent=gene-AL42_RS11875;Dbxref=GenBank:WP_003406244.1;Name=WP_003406244.1;gbkey=CDS;gene=tagA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215726.1;locus_tag=AL42_RS11875;product=DNA-3-methyladenine glycosylase I;protein_id=WP_003406244.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1352888 1353055 . + . ID=gene-AL42_RS11880;Name=AL42_RS11880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11880;old_locus_tag=AL42_01260 NZ_KK316784.1 Protein Homology CDS 1352888 1353055 . + 0 ID=cds-WP_003406247.1;Parent=gene-AL42_RS11880;Dbxref=GenBank:WP_003406247.1;Name=WP_003406247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003945169.1;locus_tag=AL42_RS11880;product=DUF3117 domain-containing protein;protein_id=WP_003406247.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1353083 1354246 . - . ID=gene-AL42_RS11885;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=AL42_RS11885;old_locus_tag=AL42_01261 NZ_KK316784.1 Protein Homology CDS 1353083 1354246 . - 0 ID=cds-WP_003898773.1;Parent=gene-AL42_RS11885;Dbxref=GenBank:WP_003898773.1;Name=WP_003898773.1;Ontology_term=GO:0009250,GO:0004373,GO:0016740;gbkey=CDS;gene=glgA;go_function=alpha-1%2C4-glucan glucosyltransferase (UDP-glucose donor) activity|0004373||IEA,transferase activity|0016740||IEA;go_process=glucan biosynthetic process|0009250||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215728.1;locus_tag=AL42_RS11885;product=glycogen synthase;protein_id=WP_003898773.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1354421 1355635 . + . ID=gene-AL42_RS11890;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=AL42_RS11890;old_locus_tag=AL42_01262 NZ_KK316784.1 Protein Homology CDS 1354421 1355635 . + 0 ID=cds-WP_003406249.1;Parent=gene-AL42_RS11890;Dbxref=GenBank:WP_003406249.1;Name=WP_003406249.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011781656.1;locus_tag=AL42_RS11890;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_003406249.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1355734 1356249 . - . ID=gene-AL42_RS27385;Name=AL42_RS27385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS27385;old_locus_tag=AL42_01263;partial=true;pseudo=true;start_range=.,1355734 NZ_KK316784.1 Protein Homology CDS 1355734 1356249 . - 0 ID=cds-AL42_RS27385;Parent=gene-AL42_RS27385;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011799154.1;locus_tag=AL42_RS27385;partial=true;product=PE family protein;pseudo=true;start_range=.,1355734;transl_table=11 NZ_KK316784.1 RefSeq gene 1356344 1358029 . - . ID=gene-AL42_RS11900;Name=AL42_RS11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11900;old_locus_tag=AL42_01264 NZ_KK316784.1 Protein Homology CDS 1356344 1358029 . - 0 ID=cds-WP_003898774.1;Parent=gene-AL42_RS11900;Dbxref=GenBank:WP_003898774.1;Name=WP_003898774.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215731.1;locus_tag=AL42_RS11900;product=CocE/NonD family hydrolase;protein_id=WP_003898774.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1358057 1358731 . - . ID=gene-AL42_RS11905;Name=AL42_RS11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11905;old_locus_tag=AL42_01265 NZ_KK316784.1 Protein Homology CDS 1358057 1358731 . - 0 ID=cds-WP_003406252.1;Parent=gene-AL42_RS11905;Dbxref=GenBank:WP_003406252.1;Name=WP_003406252.1;Ontology_term=GO:0032259,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215732.1;locus_tag=AL42_RS11905;product=methyltransferase family protein;protein_id=WP_003406252.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1358740 1360386 . - . ID=gene-AL42_RS11910;Name=AL42_RS11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11910;old_locus_tag=AL42_01266 NZ_KK316784.1 Protein Homology CDS 1358740 1360386 . - 0 ID=cds-WP_003902026.1;Parent=gene-AL42_RS11910;Dbxref=GenBank:WP_003902026.1;Name=WP_003902026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215733.1;locus_tag=AL42_RS11910;product=multidrug efflux ABC transporter permease;protein_id=WP_003902026.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1360383 1361318 . - . ID=gene-AL42_RS11915;Name=AL42_RS11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11915;old_locus_tag=AL42_01267 NZ_KK316784.1 Protein Homology CDS 1360383 1361318 . - 0 ID=cds-WP_003900295.1;Parent=gene-AL42_RS11915;Dbxref=GenBank:WP_003900295.1;Name=WP_003900295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215734.1;locus_tag=AL42_RS11915;product=multidrug efflux ABC transporter ATP-binding protein;protein_id=WP_003900295.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1361308 1361946 . - . ID=gene-AL42_RS11920;Name=raaS;gbkey=Gene;gene=raaS;gene_biotype=protein_coding;locus_tag=AL42_RS11920;old_locus_tag=AL42_01268 NZ_KK316784.1 Protein Homology CDS 1361308 1361946 . - 0 ID=cds-WP_003406254.1;Parent=gene-AL42_RS11920;Dbxref=GenBank:WP_003406254.1;Name=WP_003406254.1;gbkey=CDS;gene=raaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215735.1;locus_tag=AL42_RS11920;product=transcriptional regulator RaaS;protein_id=WP_003406254.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1362088 1362735 . - . ID=gene-AL42_RS11925;Name=AL42_RS11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11925;old_locus_tag=AL42_01269 NZ_KK316784.1 Protein Homology CDS 1362088 1362735 . - 0 ID=cds-WP_003406255.1;Parent=gene-AL42_RS11925;Dbxref=GenBank:WP_003406255.1;Name=WP_003406255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003406255.1;locus_tag=AL42_RS11925;product=SAM-dependent O-methyltransferase;protein_id=WP_003406255.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1362998 1363771 . + . ID=gene-AL42_RS11930;Name=sigE;gbkey=Gene;gene=sigE;gene_biotype=protein_coding;locus_tag=AL42_RS11930;old_locus_tag=AL42_01270 NZ_KK316784.1 Protein Homology CDS 1362998 1363771 . + 0 ID=cds-WP_003406257.1;Parent=gene-AL42_RS11930;Dbxref=GenBank:WP_003406257.1;Name=WP_003406257.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=sigE;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215737.1;locus_tag=AL42_RS11930;product=RNA polymerase sigma factor SigE;protein_id=WP_003406257.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1363929 1364393 . + . ID=gene-AL42_RS11935;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=AL42_RS11935;old_locus_tag=AL42_01271 NZ_KK316784.1 Protein Homology CDS 1363929 1364393 . + 0 ID=cds-WP_003406258.1;Parent=gene-AL42_RS11935;Dbxref=GenBank:WP_003406258.1;Name=WP_003406258.1;Ontology_term=GO:0016989;gbkey=CDS;gene=rseA;go_function=sigma factor antagonist activity|0016989||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215738.1;locus_tag=AL42_RS11935;product=anti-sigma E factor RseA;protein_id=WP_003406258.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1364534 1366048 . + . ID=gene-AL42_RS11940;Name=htrA;gbkey=Gene;gene=htrA;gene_biotype=protein_coding;locus_tag=AL42_RS11940;old_locus_tag=AL42_01272 NZ_KK316784.1 Protein Homology CDS 1364534 1366048 . + 0 ID=cds-WP_003911452.1;Parent=gene-AL42_RS11940;Dbxref=GenBank:WP_003911452.1;Name=WP_003911452.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;gene=htrA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007773721.1;locus_tag=AL42_RS11940;product=serine protease HtrA;protein_id=WP_003911452.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1366050 1366445 . + . ID=gene-AL42_RS11945;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=AL42_RS11945;old_locus_tag=AL42_01273 NZ_KK316784.1 Protein Homology CDS 1366050 1366445 . + 0 ID=cds-WP_003406260.1;Parent=gene-AL42_RS11945;Dbxref=GenBank:WP_003406260.1;Name=WP_003406260.1;Ontology_term=GO:0015628,GO:0008320,GO:0016020;gbkey=CDS;gene=tatB;go_component=membrane|0016020||IEA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215740.1;locus_tag=AL42_RS11945;product=Sec-independent protein translocase protein TatB;protein_id=WP_003406260.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1366478 1367309 . - . ID=gene-AL42_RS0104615;Name=AL42_RS0104615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS0104615;old_locus_tag=AL42_01274;pseudo=true NZ_KK316784.1 Protein Homology CDS 1366478 1367309 . - 0 ID=cds-AL42_RS0104615;Parent=gene-AL42_RS0104615;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215741.1;locus_tag=AL42_RS0104615;product=HAD-IIA family hydrolase;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 1367420 1368883 . - . ID=gene-AL42_RS11950;Name=AL42_RS11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11950;old_locus_tag=AL42_01275 NZ_KK316784.1 Protein Homology CDS 1367420 1368883 . - 0 ID=cds-WP_003898781.1;Parent=gene-AL42_RS11950;Dbxref=GenBank:WP_003898781.1;Name=WP_003898781.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215742.1;locus_tag=AL42_RS11950;product=PH domain-containing protein;protein_id=WP_003898781.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1368880 1369413 . - . ID=gene-AL42_RS11955;Name=AL42_RS11955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11955;old_locus_tag=AL42_01276 NZ_KK316784.1 Protein Homology CDS 1368880 1369413 . - 0 ID=cds-WP_003406264.1;Parent=gene-AL42_RS11955;Dbxref=GenBank:WP_003406264.1;Name=WP_003406264.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215743.1;locus_tag=AL42_RS11955;product=PH domain-containing protein;protein_id=WP_003406264.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1369508 1370065 . + . ID=gene-AL42_RS11960;Name=AL42_RS11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11960;old_locus_tag=AL42_01277 NZ_KK316784.1 Protein Homology CDS 1369508 1370065 . + 0 ID=cds-WP_003406266.1;Parent=gene-AL42_RS11960;Dbxref=GenBank:WP_003406266.1;Name=WP_003406266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215744.1;locus_tag=AL42_RS11960;product=hypothetical protein;protein_id=WP_003406266.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1370117 1370290 . + . ID=gene-AL42_RS25735;Name=AL42_RS25735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS25735 NZ_KK316784.1 Protein Homology CDS 1370117 1370290 . + 0 ID=cds-WP_003908664.1;Parent=gene-AL42_RS25735;Dbxref=GenBank:WP_003908664.1;Name=WP_003908664.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030032.1;locus_tag=AL42_RS25735;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_003908664.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1370365 1371537 . - . ID=gene-AL42_RS11965;Name=mrp;gbkey=Gene;gene=mrp;gene_biotype=protein_coding;locus_tag=AL42_RS11965;old_locus_tag=AL42_01278 NZ_KK316784.1 Protein Homology CDS 1370365 1371537 . - 0 ID=cds-WP_003406273.1;Parent=gene-AL42_RS11965;Dbxref=GenBank:WP_003406273.1;Name=WP_003406273.1;gbkey=CDS;gene=mrp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215745.1;locus_tag=AL42_RS11965;product=Mrp/NBP35 family ATP-binding protein;protein_id=WP_003406273.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1371550 1372785 . - . ID=gene-AL42_RS11970;Name=AL42_RS11970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11970;old_locus_tag=AL42_01279 NZ_KK316784.1 Protein Homology CDS 1371550 1372785 . - 0 ID=cds-WP_003406276.1;Parent=gene-AL42_RS11970;Dbxref=GenBank:WP_003406276.1;Name=WP_003406276.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215746.1;locus_tag=AL42_RS11970;product=lytic transglycosylase domain-containing protein;protein_id=WP_003406276.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1372910 1373452 . - . ID=gene-AL42_RS11975;Name=AL42_RS11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11975;old_locus_tag=AL42_01280 NZ_KK316784.1 Protein Homology CDS 1372910 1373452 . - 0 ID=cds-WP_003406283.1;Parent=gene-AL42_RS11975;Dbxref=GenBank:WP_003406283.1;Name=WP_003406283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215747.1;locus_tag=AL42_RS11975;product=DUF1003 domain-containing protein;protein_id=WP_003406283.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1373449 1374756 . - . ID=gene-AL42_RS11980;Name=AL42_RS11980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11980;old_locus_tag=AL42_01281 NZ_KK316784.1 Protein Homology CDS 1373449 1374756 . - 0 ID=cds-WP_003406286.1;Parent=gene-AL42_RS11980;Dbxref=GenBank:WP_003406286.1;Name=WP_003406286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215748.1;locus_tag=AL42_RS11980;product=magnesium transporter;protein_id=WP_003406286.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1374818 1375414 . - . ID=gene-AL42_RS11985;Name=AL42_RS11985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11985;old_locus_tag=AL42_01282 NZ_KK316784.1 Protein Homology CDS 1374818 1375414 . - 0 ID=cds-WP_003406288.1;Parent=gene-AL42_RS11985;Dbxref=GenBank:WP_003406288.1;Name=WP_003406288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215749.1;locus_tag=AL42_RS11985;product=DUF4190 domain-containing protein;protein_id=WP_003406288.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1375564 1376091 . + . ID=gene-AL42_RS11990;Name=AL42_RS11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS11990;old_locus_tag=AL42_01283 NZ_KK316784.1 Protein Homology CDS 1375564 1376091 . + 0 ID=cds-WP_003406290.1;Parent=gene-AL42_RS11990;Dbxref=GenBank:WP_003406290.1;Name=WP_003406290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215750.1;locus_tag=AL42_RS11990;product=YflT domain-containing protein;protein_id=WP_003406290.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1376112 1377518 . + . ID=gene-AL42_RS11995;Name=lpqY;gbkey=Gene;gene=lpqY;gene_biotype=protein_coding;locus_tag=AL42_RS11995;old_locus_tag=AL42_01284 NZ_KK316784.1 Protein Homology CDS 1376112 1377518 . + 0 ID=cds-WP_003898783.1;Parent=gene-AL42_RS11995;Dbxref=GenBank:WP_003898783.1;Name=WP_003898783.1;gbkey=CDS;gene=lpqY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215751.1;locus_tag=AL42_RS11995;product=trehalose ABC transporter substrate-binding protein LpqY;protein_id=WP_003898783.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1377515 1378438 . + . ID=gene-AL42_RS12000;Name=sugA;gbkey=Gene;gene=sugA;gene_biotype=protein_coding;locus_tag=AL42_RS12000;old_locus_tag=AL42_01285 NZ_KK316784.1 Protein Homology CDS 1377515 1378438 . + 0 ID=cds-WP_003406295.1;Parent=gene-AL42_RS12000;Dbxref=GenBank:WP_003406295.1;Name=WP_003406295.1;gbkey=CDS;gene=sugA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215752.1;locus_tag=AL42_RS12000;product=trehalose ABC transporter permease SugA;protein_id=WP_003406295.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1378443 1379267 . + . ID=gene-AL42_RS12005;Name=sugB;gbkey=Gene;gene=sugB;gene_biotype=protein_coding;locus_tag=AL42_RS12005;old_locus_tag=AL42_01286 NZ_KK316784.1 Protein Homology CDS 1378443 1379267 . + 0 ID=cds-WP_003900298.1;Parent=gene-AL42_RS12005;Dbxref=GenBank:WP_003900298.1;Name=WP_003900298.1;gbkey=CDS;gene=sugB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215753.1;locus_tag=AL42_RS12005;product=trehalose ABC transporter permease SugB;protein_id=WP_003900298.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1379272 1380453 . + . ID=gene-AL42_RS12010;Name=sugC;gbkey=Gene;gene=sugC;gene_biotype=protein_coding;locus_tag=AL42_RS12010;old_locus_tag=AL42_01287 NZ_KK316784.1 Protein Homology CDS 1379272 1380453 . + 0 ID=cds-WP_003406299.1;Parent=gene-AL42_RS12010;Dbxref=GenBank:WP_003406299.1;Name=WP_003406299.1;gbkey=CDS;gene=sugC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215754.1;locus_tag=AL42_RS12010;product=trehalose ABC transporter ATP-binding protein SugC;protein_id=WP_003406299.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1380530 1381630 . - . ID=gene-AL42_RS12015;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=AL42_RS12015;old_locus_tag=AL42_01288 NZ_KK316784.1 Protein Homology CDS 1380530 1381630 . - 0 ID=cds-WP_003406300.1;Parent=gene-AL42_RS12015;Dbxref=GenBank:WP_003406300.1;Name=WP_003406300.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095,GO:0016020;gbkey=CDS;gene=corA;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215755.1;locus_tag=AL42_RS12015;product=magnesium/cobalt transporter CorA;protein_id=WP_003406300.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1381801 1382790 . + . ID=gene-AL42_RS12020;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=AL42_RS12020;old_locus_tag=AL42_01289 NZ_KK316784.1 Protein Homology CDS 1381801 1382790 . + 0 ID=cds-WP_003406301.1;Parent=gene-AL42_RS12020;Dbxref=GenBank:WP_003406301.1;Name=WP_003406301.1;Ontology_term=GO:0006108,GO:0016615;gbkey=CDS;gene=mdh;go_function=malate dehydrogenase activity|0016615||IEA;go_process=malate metabolic process|0006108||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215756.1;locus_tag=AL42_RS12020;product=malate dehydrogenase;protein_id=WP_003406301.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1382866 1383126 . + . ID=gene-AL42_RS12025;Name=vapB33;gbkey=Gene;gene=vapB33;gene_biotype=protein_coding;locus_tag=AL42_RS12025;old_locus_tag=AL42_01290 NZ_KK316784.1 Protein Homology CDS 1382866 1383126 . + 0 ID=cds-WP_003406302.1;Parent=gene-AL42_RS12025;Dbxref=GenBank:WP_003406302.1;Name=WP_003406302.1;gbkey=CDS;gene=vapB33;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215757.1;locus_tag=AL42_RS12025;product=type II toxin-antitoxin system antitoxin VapB33;protein_id=WP_003406302.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1383123 1383554 . + . ID=gene-AL42_RS12030;Name=AL42_RS12030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12030;old_locus_tag=AL42_01291 NZ_KK316784.1 Protein Homology CDS 1383123 1383554 . + 0 ID=cds-WP_003406304.1;Parent=gene-AL42_RS12030;Dbxref=GenBank:WP_003406304.1;Name=WP_003406304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215758.1;locus_tag=AL42_RS12030;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003406304.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1383577 1385160 . - . ID=gene-AL42_RS12035;Name=AL42_RS12035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12035;old_locus_tag=AL42_01292 NZ_KK316784.1 Protein Homology CDS 1383577 1385160 . - 0 ID=cds-WP_009940130.1;Parent=gene-AL42_RS12035;Dbxref=GenBank:WP_009940130.1;Name=WP_009940130.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177798.1;locus_tag=AL42_RS12035;product=PE family protein;protein_id=WP_009940130.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1385340 1386200 . + . ID=gene-AL42_RS12040;Name=lpqZ;gbkey=Gene;gene=lpqZ;gene_biotype=protein_coding;locus_tag=AL42_RS12040;old_locus_tag=AL42_01293 NZ_KK316784.1 Protein Homology CDS 1385340 1386200 . + 0 ID=cds-WP_003900301.1;Parent=gene-AL42_RS12040;Dbxref=GenBank:WP_003900301.1;Name=WP_003900301.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;gene=lpqZ;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215760.1;locus_tag=AL42_RS12040;product=glycine betaine ABC transporter substrate-binding protein;protein_id=WP_003900301.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1386281 1387111 . - . ID=gene-AL42_RS12045;Name=AL42_RS12045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12045;old_locus_tag=AL42_01294 NZ_KK316784.1 Protein Homology CDS 1386281 1387111 . - 0 ID=cds-WP_003898788.1;Parent=gene-AL42_RS12045;Dbxref=GenBank:WP_003898788.1;Name=WP_003898788.1;Ontology_term=GO:0016491,GO:0070401,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP+ binding|0070401||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215761.1;locus_tag=AL42_RS12045;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_003898788.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1387168 1387461 . - . ID=gene-AL42_RS12050;Name=relE;gbkey=Gene;gene=relE;gene_biotype=protein_coding;locus_tag=AL42_RS12050;old_locus_tag=AL42_01295 NZ_KK316784.1 Protein Homology CDS 1387168 1387461 . - 0 ID=cds-WP_003898789.1;Parent=gene-AL42_RS12050;Dbxref=GenBank:WP_003898789.1;Name=WP_003898789.1;gbkey=CDS;gene=relE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215762.1;locus_tag=AL42_RS12050;product=type II toxin-antitoxin system mRNA interferase RelE;protein_id=WP_003898789.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1387458 1387727 . - . ID=gene-AL42_RS12055;Name=relB;gbkey=Gene;gene=relB;gene_biotype=protein_coding;locus_tag=AL42_RS12055;old_locus_tag=AL42_01296 NZ_KK316784.1 Protein Homology CDS 1387458 1387727 . - 0 ID=cds-WP_003406322.1;Parent=gene-AL42_RS12055;Dbxref=GenBank:WP_003406322.1;Name=WP_003406322.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;gene=relB;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215763.1;locus_tag=AL42_RS12055;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_003406322.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1387840 1391535 . - . ID=gene-AL42_RS12060;Name=AL42_RS12060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12060;old_locus_tag=AL42_01297 NZ_KK316784.1 Protein Homology CDS 1387840 1391535 . - 0 ID=cds-WP_003406323.1;Parent=gene-AL42_RS12060;Dbxref=GenBank:WP_003406323.1;Name=WP_003406323.1;Ontology_term=GO:0006099,GO:0004591,GO:0016746,GO:0030976;gbkey=CDS;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,acyltransferase activity|0016746||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215764.2;locus_tag=AL42_RS12060;product=multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;protein_id=WP_003406323.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1391677 1392465 . - . ID=gene-AL42_RS12065;Name=AL42_RS12065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12065;old_locus_tag=AL42_01298 NZ_KK316784.1 Protein Homology CDS 1391677 1392465 . - 0 ID=cds-WP_003406325.1;Parent=gene-AL42_RS12065;Dbxref=GenBank:WP_003406325.1;Name=WP_003406325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215765.1;locus_tag=AL42_RS12065;product=hypothetical protein;protein_id=WP_003406325.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1392662 1394401 . + . ID=gene-AL42_RS12070;Name=AL42_RS12070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12070;old_locus_tag=AL42_01299 NZ_KK316784.1 Protein Homology CDS 1392662 1394401 . + 0 ID=cds-WP_003898791.1;Parent=gene-AL42_RS12070;Dbxref=GenBank:WP_003898791.1;Name=WP_003898791.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215766.1;locus_tag=AL42_RS12070;product=MFS transporter;protein_id=WP_003898791.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1394304 1397723 . - . ID=gene-AL42_RS12075;Name=AL42_RS12075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12075;old_locus_tag=AL42_01300 NZ_KK316784.1 Protein Homology CDS 1394304 1397723 . - 0 ID=cds-WP_031721912.1;Parent=gene-AL42_RS12075;Dbxref=GenBank:WP_031721912.1;Name=WP_031721912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215767.1;locus_tag=AL42_RS12075;product=TM0106 family RecB-like putative nuclease;protein_id=WP_031721912.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1397779 1398387 . - . ID=gene-AL42_RS12080;Name=lprE;gbkey=Gene;gene=lprE;gene_biotype=protein_coding;locus_tag=AL42_RS12080;old_locus_tag=AL42_01301 NZ_KK316784.1 Protein Homology CDS 1397779 1398387 . - 0 ID=cds-WP_003406334.1;Parent=gene-AL42_RS12080;Dbxref=GenBank:WP_003406334.1;Name=WP_003406334.1;gbkey=CDS;gene=lprE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215768.1;locus_tag=AL42_RS12080;product=LppP/LprE family lipoprotein;protein_id=WP_003406334.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1398453 1400144 . + . ID=gene-AL42_RS12085;Name=deaD;gbkey=Gene;gene=deaD;gene_biotype=protein_coding;locus_tag=AL42_RS12085;old_locus_tag=AL42_01302 NZ_KK316784.1 Protein Homology CDS 1398453 1400144 . + 0 ID=cds-WP_003898793.1;Parent=gene-AL42_RS12085;Dbxref=GenBank:WP_003898793.1;Name=WP_003898793.1;gbkey=CDS;gene=deaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215769.1;locus_tag=AL42_RS12085;product=DEAD/DEAH box helicase;protein_id=WP_003898793.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1400141 1401292 . + . ID=gene-AL42_RS12090;Name=AL42_RS12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12090;old_locus_tag=AL42_01303 NZ_KK316784.1 Protein Homology CDS 1400141 1401292 . + 0 ID=cds-WP_003406347.1;Parent=gene-AL42_RS12090;Dbxref=GenBank:WP_003406347.1;Name=WP_003406347.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215770.1;locus_tag=AL42_RS12090;product=acyltransferase family protein;protein_id=WP_003406347.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1401261 1401869 . - . ID=gene-AL42_RS12095;Name=AL42_RS12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12095;old_locus_tag=AL42_01304 NZ_KK316784.1 Protein Homology CDS 1401261 1401869 . - 0 ID=cds-WP_003406350.1;Parent=gene-AL42_RS12095;Dbxref=GenBank:WP_003406350.1;Name=WP_003406350.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215771.1;locus_tag=AL42_RS12095;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003406350.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1401869 1403086 . - . ID=gene-AL42_RS12100;Name=cyp130;gbkey=Gene;gene=cyp130;gene_biotype=protein_coding;locus_tag=AL42_RS12100;old_locus_tag=AL42_01305 NZ_KK316784.1 Protein Homology CDS 1401869 1403086 . - 0 ID=cds-WP_003406352.1;Parent=gene-AL42_RS12100;Dbxref=GenBank:WP_003406352.1;Name=WP_003406352.1;gbkey=CDS;gene=cyp130;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215772.1;locus_tag=AL42_RS12100;product=cytochrome P450 Cyp130;protein_id=WP_003406352.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1403200 1404567 . - . ID=gene-AL42_RS12105;Name=AL42_RS12105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12105;old_locus_tag=AL42_01306 NZ_KK316784.1 Protein Homology CDS 1403200 1404567 . - 0 ID=cds-WP_003406358.1;Parent=gene-AL42_RS12105;Dbxref=GenBank:WP_003406358.1;Name=WP_003406358.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215773.1;locus_tag=AL42_RS12105;product=FAD-binding oxidoreductase;protein_id=WP_003406358.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1404564 1405824 . - . ID=gene-AL42_RS27155;Name=AL42_RS27155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS27155;pseudo=true NZ_KK316784.1 Protein Homology CDS 1404564 1405824 . - 0 ID=cds-AL42_RS27155;Parent=gene-AL42_RS27155;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215774.1;locus_tag=AL42_RS27155;product=MFS transporter;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 1405895 1406722 . + . ID=gene-AL42_RS12115;Name=udgB;gbkey=Gene;gene=udgB;gene_biotype=protein_coding;locus_tag=AL42_RS12115;old_locus_tag=AL42_01308 NZ_KK316784.1 Protein Homology CDS 1405895 1406722 . + 0 ID=cds-WP_003911466.1;Parent=gene-AL42_RS12115;Dbxref=GenBank:WP_003911466.1;Name=WP_003911466.1;gbkey=CDS;gene=udgB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011724119.1;locus_tag=AL42_RS12115;product=uracil-DNA glycosylase;protein_id=WP_003911466.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1406724 1407842 . + . ID=gene-AL42_RS12120;Name=AL42_RS12120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12120;old_locus_tag=AL42_01309 NZ_KK316784.1 Protein Homology CDS 1406724 1407842 . + 0 ID=cds-WP_003406361.1;Parent=gene-AL42_RS12120;Dbxref=GenBank:WP_003406361.1;Name=WP_003406361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215776.1;locus_tag=AL42_RS12120;product=FAD-binding protein;protein_id=WP_003406361.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1407968 1408417 . - . ID=gene-AL42_RS12125;Name=AL42_RS12125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12125;old_locus_tag=AL42_01310 NZ_KK316784.1 Protein Homology CDS 1407968 1408417 . - 0 ID=cds-WP_003406364.1;Parent=gene-AL42_RS12125;Dbxref=GenBank:WP_003406364.1;Name=WP_003406364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215777.1;locus_tag=AL42_RS12125;product=F420H(2)-dependent quinone reductase;protein_id=WP_003406364.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1408422 1408856 . - . ID=gene-AL42_RS12130;Name=AL42_RS12130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12130;old_locus_tag=AL42_01311 NZ_KK316784.1 Protein Homology CDS 1408422 1408856 . - 0 ID=cds-WP_003898798.1;Parent=gene-AL42_RS12130;Dbxref=GenBank:WP_003898798.1;Name=WP_003898798.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215778.1;locus_tag=AL42_RS12130;product=HIT family protein;protein_id=WP_003898798.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1408915 1410303 . + . ID=gene-AL42_RS12135;Name=AL42_RS12135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12135;old_locus_tag=AL42_01312 NZ_KK316784.1 Protein Homology CDS 1408915 1410303 . + 0 ID=cds-WP_003406369.1;Parent=gene-AL42_RS12135;Dbxref=GenBank:WP_003406369.1;Name=WP_003406369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215779.1;locus_tag=AL42_RS12135;product=amidase;protein_id=WP_003406369.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1410378 1411571 . + . ID=gene-AL42_RS12140;Name=AL42_RS12140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12140;old_locus_tag=AL42_01313 NZ_KK316784.1 Protein Homology CDS 1410378 1411571 . + 0 ID=cds-WP_003406372.1;Parent=gene-AL42_RS12140;Dbxref=GenBank:WP_003406372.1;Name=WP_003406372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215780.1;locus_tag=AL42_RS12140;product=adenylate cyclase;protein_id=WP_003406372.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1411743 1412423 . + . ID=gene-AL42_RS12145;Name=abmR;gbkey=Gene;gene=abmR;gene_biotype=protein_coding;locus_tag=AL42_RS12145;old_locus_tag=AL42_01314 NZ_KK316784.1 Protein Homology CDS 1411743 1412423 . + 0 ID=cds-WP_003406375.1;Parent=gene-AL42_RS12145;Dbxref=GenBank:WP_003406375.1;Name=WP_003406375.1;gbkey=CDS;gene=abmR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003406375.1;locus_tag=AL42_RS12145;product=transcriptional regulator AbmR;protein_id=WP_003406375.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1412443 1414323 . - . ID=gene-AL42_RS12150;Name=pknH;gbkey=Gene;gene=pknH;gene_biotype=protein_coding;locus_tag=AL42_RS12150;old_locus_tag=AL42_01315 NZ_KK316784.1 Protein Homology CDS 1412443 1414323 . - 0 ID=cds-WP_003898799.1;Parent=gene-AL42_RS12150;Dbxref=GenBank:WP_003898799.1;Name=WP_003898799.1;gbkey=CDS;gene=pknH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215782.1;locus_tag=AL42_RS12150;product=serine/threonine protein kinase PknH;protein_id=WP_003898799.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1414664 1415830 . - . ID=gene-AL42_RS12155;Name=embR;gbkey=Gene;gene=embR;gene_biotype=protein_coding;locus_tag=AL42_RS12155;old_locus_tag=AL42_01316 NZ_KK316784.1 Protein Homology CDS 1414664 1415830 . - 0 ID=cds-WP_003406553.1;Parent=gene-AL42_RS12155;Dbxref=GenBank:WP_003406553.1;Name=WP_003406553.1;Note=Phosphorylation of EmbR by cognate serine/threonine kinase PknH leads to increased DNA-binding activity%2C increased expression of embCAB genes%2C and reduced senstivity to ethambutol.;gbkey=CDS;gene=embR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215783.1;locus_tag=AL42_RS12155;product=ATPase/transcriptional regulator EmbR;protein_id=WP_003406553.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1416141 1416839 . - . ID=gene-AL42_RS12160;Name=AL42_RS12160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12160;old_locus_tag=AL42_01317 NZ_KK316784.1 Protein Homology CDS 1416141 1416839 . - 0 ID=cds-WP_003898800.1;Parent=gene-AL42_RS12160;Dbxref=GenBank:WP_003898800.1;Name=WP_003898800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215784.1;locus_tag=AL42_RS12160;product=C39 family peptidase;protein_id=WP_003898800.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1417062 1417444 . - . ID=gene-AL42_RS25750;Name=AL42_RS25750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS25750;old_locus_tag=AL42_01318;pseudo=true NZ_KK316784.1 Protein Homology CDS 1417062 1417444 . - 0 ID=cds-AL42_RS25750;Parent=gene-AL42_RS25750;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215785.1;locus_tag=AL42_RS25750;product=DUF4189 domain-containing protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 1417505 1418239 . - . ID=gene-AL42_RS12165;Name=lprA;gbkey=Gene;gene=lprA;gene_biotype=protein_coding;locus_tag=AL42_RS12165;old_locus_tag=AL42_01319 NZ_KK316784.1 Protein Homology CDS 1417505 1418239 . - 0 ID=cds-WP_003406562.1;Parent=gene-AL42_RS12165;Dbxref=GenBank:WP_003406562.1;Name=WP_003406562.1;gbkey=CDS;gene=lprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215786.1;locus_tag=AL42_RS12165;product=TLR2 agonist LprA;protein_id=WP_003406562.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1418452 1418793 . - . ID=gene-AL42_RS12170;Name=AL42_RS12170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12170;old_locus_tag=AL42_01320 NZ_KK316784.1 Protein Homology CDS 1418452 1418793 . - 0 ID=cds-WP_003406566.1;Parent=gene-AL42_RS12170;Dbxref=GenBank:WP_003406566.1;Name=WP_003406566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215787.1;locus_tag=AL42_RS12170;product=DUF732 domain-containing protein;protein_id=WP_003406566.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1418901 1420796 . - . ID=gene-AL42_RS12175;Name=AL42_RS12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12175;old_locus_tag=AL42_01321 NZ_KK316784.1 Protein Homology CDS 1418901 1420796 . - 0 ID=cds-WP_003406569.1;Parent=gene-AL42_RS12175;Dbxref=GenBank:WP_003406569.1;Name=WP_003406569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215788.1;locus_tag=AL42_RS12175;product=fatty acid ABC transporter ATP-binding protein/permease;protein_id=WP_003406569.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1420793 1422541 . - . ID=gene-AL42_RS12180;Name=AL42_RS12180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12180;old_locus_tag=AL42_01322 NZ_KK316784.1 Protein Homology CDS 1420793 1422541 . - 0 ID=cds-WP_003406574.1;Parent=gene-AL42_RS12180;Dbxref=GenBank:WP_003406574.1;Name=WP_003406574.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215789.1;locus_tag=AL42_RS12180;product=ABC transporter ATP-binding protein;protein_id=WP_003406574.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1422688 1423245 . + . ID=gene-AL42_RS12185;Name=lprB;gbkey=Gene;gene=lprB;gene_biotype=protein_coding;locus_tag=AL42_RS12185;old_locus_tag=AL42_01323 NZ_KK316784.1 Protein Homology CDS 1422688 1423245 . + 0 ID=cds-WP_003901123.1;Parent=gene-AL42_RS12185;Dbxref=GenBank:WP_003901123.1;Name=WP_003901123.1;gbkey=CDS;gene=lprB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215790.1;locus_tag=AL42_RS12185;product=DUF3558 domain-containing protein;protein_id=WP_003901123.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1423242 1423784 . + . ID=gene-AL42_RS12190;Name=lprC;gbkey=Gene;gene=lprC;gene_biotype=protein_coding;locus_tag=AL42_RS12190;old_locus_tag=AL42_01324 NZ_KK316784.1 Protein Homology CDS 1423242 1423784 . + 0 ID=cds-WP_003900308.1;Parent=gene-AL42_RS12190;Dbxref=GenBank:WP_003900308.1;Name=WP_003900308.1;gbkey=CDS;gene=lprC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215791.1;locus_tag=AL42_RS12190;product=DUF3558 domain-containing protein;protein_id=WP_003900308.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1423929 1424435 . - . ID=gene-AL42_RS12195;Name=AL42_RS12195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12195;old_locus_tag=AL42_01325 NZ_KK316784.1 Protein Homology CDS 1423929 1424435 . - 0 ID=cds-WP_003898805.1;Parent=gene-AL42_RS12195;Dbxref=GenBank:WP_003898805.1;Name=WP_003898805.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015385265.1;locus_tag=AL42_RS12195;product=SixA phosphatase family protein;protein_id=WP_003898805.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1424757 1425908 . + . ID=gene-AL42_RS12200;Name=AL42_RS12200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12200;old_locus_tag=AL42_01326 NZ_KK316784.1 Protein Homology CDS 1424757 1425908 . + 0 ID=cds-WP_003911418.1;Parent=gene-AL42_RS12200;Dbxref=GenBank:WP_003911418.1;Name=WP_003911418.1;Ontology_term=GO:0003677,GO:0042578,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011741672.1;locus_tag=AL42_RS12200;product=metallophosphoesterase family protein;protein_id=WP_003911418.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1425905 1428532 . + . ID=gene-AL42_RS12205;Name=AL42_RS12205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12205;old_locus_tag=AL42_01327 NZ_KK316784.1 Protein Homology CDS 1425905 1428532 . + 0 ID=cds-WP_003898806.1;Parent=gene-AL42_RS12205;Dbxref=GenBank:WP_003898806.1;Name=WP_003898806.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215794.1;locus_tag=AL42_RS12205;product=AAA family ATPase;protein_id=WP_003898806.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1428553 1430139 . + . ID=gene-AL42_RS12210;Name=AL42_RS12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12210;old_locus_tag=AL42_01328 NZ_KK316784.1 Protein Homology CDS 1428553 1430139 . + 0 ID=cds-WP_003406598.1;Parent=gene-AL42_RS12210;Dbxref=GenBank:WP_003406598.1;Name=WP_003406598.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215795.1;locus_tag=AL42_RS12210;product=GMC family oxidoreductase;protein_id=WP_003406598.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1430156 1431931 . - . ID=gene-AL42_RS12215;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=AL42_RS12215;old_locus_tag=AL42_01329 NZ_KK316784.1 Protein Homology CDS 1430156 1431931 . - 0 ID=cds-WP_003900310.1;Parent=gene-AL42_RS12215;Dbxref=GenBank:WP_003900310.1;Name=WP_003900310.1;gbkey=CDS;gene=oppA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215796.1;locus_tag=AL42_RS12215;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WP_003900310.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1431924 1433762 . - . ID=gene-AL42_RS12220;Name=oppD;gbkey=Gene;gene=oppD;gene_biotype=protein_coding;locus_tag=AL42_RS12220;old_locus_tag=AL42_01330 NZ_KK316784.1 Protein Homology CDS 1431924 1433762 . - 0 ID=cds-WP_003406602.1;Parent=gene-AL42_RS12220;Dbxref=GenBank:WP_003406602.1;Name=WP_003406602.1;Ontology_term=GO:0015833,GO:0005524;gbkey=CDS;gene=oppD;go_function=ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215797.1;locus_tag=AL42_RS12220;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_003406602.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1433759 1434634 . - . ID=gene-AL42_RS12225;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=AL42_RS12225;old_locus_tag=AL42_01331 NZ_KK316784.1 Protein Homology CDS 1433759 1434634 . - 0 ID=cds-WP_003406607.1;Parent=gene-AL42_RS12225;Dbxref=GenBank:WP_003406607.1;Name=WP_003406607.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;gene=oppC;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215798.1;locus_tag=AL42_RS12225;product=ABC transporter permease;protein_id=WP_003406607.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1434631 1435608 . - . ID=gene-AL42_RS12230;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=AL42_RS12230;old_locus_tag=AL42_01332 NZ_KK316784.1 Protein Homology CDS 1434631 1435608 . - 0 ID=cds-WP_003406613.1;Parent=gene-AL42_RS12230;Dbxref=GenBank:WP_003406613.1;Name=WP_003406613.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215799.1;locus_tag=AL42_RS12230;product=ABC transporter permease;protein_id=WP_003406613.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1435813 1436304 . + . ID=gene-AL42_RS12235;Name=canA;gbkey=Gene;gene=canA;gene_biotype=protein_coding;locus_tag=AL42_RS12235;old_locus_tag=AL42_01333 NZ_KK316784.1 Protein Homology CDS 1435813 1436304 . + 0 ID=cds-WP_003406616.1;Parent=gene-AL42_RS12235;Dbxref=GenBank:WP_003406616.1;Name=WP_003406616.1;gbkey=CDS;gene=canA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215800.1;locus_tag=AL42_RS12235;product=beta-carbonic anhydrase CanA;protein_id=WP_003406616.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1436398 1437396 . + . ID=gene-AL42_RS12240;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=AL42_RS12240;old_locus_tag=AL42_01334 NZ_KK316784.1 Protein Homology CDS 1436398 1437396 . + 0 ID=cds-WP_003406618.1;Parent=gene-AL42_RS12240;Dbxref=GenBank:WP_003406618.1;Name=WP_003406618.1;Ontology_term=GO:0000103,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215801.1;locus_tag=AL42_RS12240;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_003406618.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1437396 1439240 . + . ID=gene-AL42_RS12245;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=AL42_RS12245;old_locus_tag=AL42_01335 NZ_KK316784.1 Protein Homology CDS 1437396 1439240 . + 0 ID=cds-WP_003406621.1;Parent=gene-AL42_RS12245;Dbxref=GenBank:WP_003406621.1;Name=WP_003406621.1;Ontology_term=GO:0000103,GO:0004020,GO:0005524;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA,ATP binding|0005524||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215802.1;locus_tag=AL42_RS12245;product=adenylyl-sulfate kinase;protein_id=WP_003406621.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1439294 1439779 . + . ID=gene-AL42_RS12250;Name=AL42_RS12250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12250;old_locus_tag=AL42_01336 NZ_KK316784.1 Protein Homology CDS 1439294 1439779 . + 0 ID=cds-WP_003406624.1;Parent=gene-AL42_RS12250;Dbxref=GenBank:WP_003406624.1;Name=WP_003406624.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215803.1;locus_tag=AL42_RS12250;product=Rrf2 family transcriptional regulator;protein_id=WP_003406624.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1439837 1441207 . + . ID=gene-AL42_RS12255;Name=AL42_RS12255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12255;old_locus_tag=AL42_01337 NZ_KK316784.1 Protein Homology CDS 1439837 1441207 . + 0 ID=cds-WP_031654254.1;Parent=gene-AL42_RS12255;Dbxref=GenBank:WP_031654254.1;Name=WP_031654254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215804.1;locus_tag=AL42_RS12255;product=esterase;protein_id=WP_031654254.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1441256 1441888 . + . ID=gene-AL42_RS12260;Name=AL42_RS12260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12260;old_locus_tag=AL42_01338 NZ_KK316784.1 Protein Homology CDS 1441256 1441888 . + 0 ID=cds-WP_003406626.1;Parent=gene-AL42_RS12260;Dbxref=GenBank:WP_003406626.1;Name=WP_003406626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215805.1;locus_tag=AL42_RS12260;product=hypothetical protein;protein_id=WP_003406626.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1441971 1443536 . - . ID=gene-AL42_RS12265;Name=AL42_RS12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12265;old_locus_tag=AL42_01339 NZ_KK316784.1 Protein Homology CDS 1441971 1443536 . - 0 ID=cds-WP_003406627.1;Parent=gene-AL42_RS12265;Dbxref=GenBank:WP_003406627.1;Name=WP_003406627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215806.1;locus_tag=AL42_RS12265;product=DUF2254 domain-containing protein;protein_id=WP_003406627.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1443547 1443861 . + . ID=gene-AL42_RS12270;Name=AL42_RS12270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12270;old_locus_tag=AL42_01340 NZ_KK316784.1 Protein Homology CDS 1443547 1443861 . + 0 ID=cds-WP_003406628.1;Parent=gene-AL42_RS12270;Dbxref=GenBank:WP_003406628.1;Name=WP_003406628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177642.1;locus_tag=AL42_RS12270;product=hypothetical protein;protein_id=WP_003406628.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1443988 1444323 . - . ID=gene-AL42_RS12275;Name=AL42_RS12275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12275;old_locus_tag=AL42_01341 NZ_KK316784.1 Protein Homology CDS 1443988 1444323 . - 0 ID=cds-WP_003406629.1;Parent=gene-AL42_RS12275;Dbxref=GenBank:WP_003406629.1;Name=WP_003406629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215807.1;locus_tag=AL42_RS12275;product=DUF732 domain-containing protein;protein_id=WP_003406629.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1444682 1444754 . - . ID=gene-AL42_RS12280;Name=AL42_RS12280;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL42_RS12280;old_locus_tag=AL42_01342 NZ_KK316784.1 tRNAscan-SE tRNA 1444682 1444754 . - . ID=rna-AL42_RS12280;Parent=gene-AL42_RS12280;anticodon=(pos:complement(1444719..1444721));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS12280;product=tRNA-Arg NZ_KK316784.1 tRNAscan-SE exon 1444682 1444754 . - . ID=exon-AL42_RS12280-1;Parent=rna-AL42_RS12280;anticodon=(pos:complement(1444719..1444721));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS12280;product=tRNA-Arg NZ_KK316784.1 RefSeq gene 1444868 1446520 . + . ID=gene-AL42_RS12285;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=AL42_RS12285;old_locus_tag=AL42_01343 NZ_KK316784.1 Protein Homology CDS 1444868 1446520 . + 0 ID=cds-WP_003406630.1;Parent=gene-AL42_RS12285;Dbxref=GenBank:WP_003406630.1;Name=WP_003406630.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215808.1;locus_tag=AL42_RS12285;product=arginine--tRNA ligase;protein_id=WP_003406630.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1446517 1447860 . + . ID=gene-AL42_RS12290;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=AL42_RS12290;old_locus_tag=AL42_01344 NZ_KK316784.1 Protein Homology CDS 1446517 1447860 . + 0 ID=cds-WP_003406632.1;Parent=gene-AL42_RS12290;Dbxref=GenBank:WP_003406632.1;Name=WP_003406632.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215809.1;locus_tag=AL42_RS12290;product=diaminopimelate decarboxylase;protein_id=WP_003406632.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1447864 1449189 . + . ID=gene-AL42_RS12295;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=AL42_RS12295;old_locus_tag=AL42_01345 NZ_KK316784.1 Protein Homology CDS 1447864 1449189 . + 0 ID=cds-WP_003406648.1;Parent=gene-AL42_RS12295;Dbxref=GenBank:WP_003406648.1;Name=WP_003406648.1;Ontology_term=GO:0006520,GO:0004412;gbkey=CDS;gene=thrA;go_function=homoserine dehydrogenase activity|0004412||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215810.1;locus_tag=AL42_RS12295;product=homoserine dehydrogenase;protein_id=WP_003406648.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1449186 1450268 . + . ID=gene-AL42_RS12300;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=AL42_RS12300;old_locus_tag=AL42_01346 NZ_KK316784.1 Protein Homology CDS 1449186 1450268 . + 0 ID=cds-WP_003406652.1;Parent=gene-AL42_RS12300;Dbxref=GenBank:WP_003406652.1;Name=WP_003406652.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215811.1;locus_tag=AL42_RS12300;product=threonine synthase;protein_id=WP_003406652.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1450372 1451322 . + . ID=gene-AL42_RS12305;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=AL42_RS12305;old_locus_tag=AL42_01347 NZ_KK316784.1 Protein Homology CDS 1450372 1451322 . + 0 ID=cds-WP_003406654.1;Parent=gene-AL42_RS12305;Dbxref=GenBank:WP_003406654.1;Name=WP_003406654.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215812.1;locus_tag=AL42_RS12305;product=homoserine kinase;protein_id=WP_003406654.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1451579 1453387 . + . ID=gene-AL42_RS12310;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=AL42_RS12310;old_locus_tag=AL42_01348 NZ_KK316784.1 Protein Homology CDS 1451579 1453387 . + 0 ID=cds-WP_031721803.1;Parent=gene-AL42_RS12310;Dbxref=GenBank:WP_031721803.1;Name=WP_031721803.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215813.1;locus_tag=AL42_RS12310;product=transcription termination factor Rho;protein_id=WP_031721803.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1453538 1453780 . + . ID=gene-AL42_RS12315;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=AL42_RS12315;old_locus_tag=AL42_01349 NZ_KK316784.1 Protein Homology CDS 1453538 1453780 . + 0 ID=cds-WP_003406668.1;Parent=gene-AL42_RS12315;Dbxref=GenBank:WP_003406668.1;Name=WP_003406668.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215814.1;locus_tag=AL42_RS12315;product=50S ribosomal protein L31;protein_id=WP_003406668.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1453870 1454943 . + . ID=gene-AL42_RS12320;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=AL42_RS12320;old_locus_tag=AL42_01350 NZ_KK316784.1 Protein Homology CDS 1453870 1454943 . + 0 ID=cds-WP_003406670.1;Parent=gene-AL42_RS12320;Dbxref=GenBank:WP_003406670.1;Name=WP_003406670.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215815.1;locus_tag=AL42_RS12320;product=peptide chain release factor 1;protein_id=WP_003406670.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1455003 1455917 . + . ID=gene-AL42_RS12325;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=AL42_RS12325;old_locus_tag=AL42_01351 NZ_KK316784.1 Protein Homology CDS 1455003 1455917 . + 0 ID=cds-WP_003917449.1;Parent=gene-AL42_RS12325;Dbxref=GenBank:WP_003917449.1;Name=WP_003917449.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003922247.1;locus_tag=AL42_RS12325;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_003917449.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1455933 1456586 . + . ID=gene-AL42_RS12330;Name=AL42_RS12330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12330;old_locus_tag=AL42_01352 NZ_KK316784.1 Protein Homology CDS 1455933 1456586 . + 0 ID=cds-WP_003898815.1;Parent=gene-AL42_RS12330;Dbxref=GenBank:WP_003898815.1;Name=WP_003898815.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215817.1;locus_tag=AL42_RS12330;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_003898815.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1456670 1457884 . + . ID=gene-AL42_RS12335;Name=rfe;gbkey=Gene;gene=rfe;gene_biotype=protein_coding;locus_tag=AL42_RS12335;old_locus_tag=AL42_01353 NZ_KK316784.1 Protein Homology CDS 1456670 1457884 . + 0 ID=cds-WP_003898816.1;Parent=gene-AL42_RS12335;Dbxref=GenBank:WP_003898816.1;Name=WP_003898816.1;gbkey=CDS;gene=rfe;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215818.1;locus_tag=AL42_RS12335;product=UDP-N-acetylglucosamine--decaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WP_003898816.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1458141 1458626 . + . ID=gene-AL42_RS12340;Name=AL42_RS12340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12340;old_locus_tag=AL42_01354 NZ_KK316784.1 Protein Homology CDS 1458141 1458626 . + 0 ID=cds-WP_003406680.1;Parent=gene-AL42_RS12340;Dbxref=GenBank:WP_003406680.1;Name=WP_003406680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215819.1;locus_tag=AL42_RS12340;product=ATP synthase subunit I;protein_id=WP_003406680.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1458619 1459371 . + . ID=gene-AL42_RS12345;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=AL42_RS12345;old_locus_tag=AL42_01355 NZ_KK316784.1 Protein Homology CDS 1458619 1459371 . + 0 ID=cds-WP_003406681.1;Parent=gene-AL42_RS12345;Dbxref=GenBank:WP_003406681.1;Name=WP_003406681.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215820.1;locus_tag=AL42_RS12345;product=F0F1 ATP synthase subunit A;protein_id=WP_003406681.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1459420 1459665 . + . ID=gene-AL42_RS12350;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=AL42_RS12350;old_locus_tag=AL42_01356 NZ_KK316784.1 Protein Homology CDS 1459420 1459665 . + 0 ID=cds-WP_003406686.1;Parent=gene-AL42_RS12350;Dbxref=GenBank:WP_003406686.1;Name=WP_003406686.1;gbkey=CDS;gene=atpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215821.1;locus_tag=AL42_RS12350;product=F0F1 ATP synthase subunit C;protein_id=WP_003406686.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1459696 1460211 . + . ID=gene-AL42_RS12355;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=AL42_RS12355;old_locus_tag=AL42_01357 NZ_KK316784.1 Protein Homology CDS 1459696 1460211 . + 0 ID=cds-WP_003898818.1;Parent=gene-AL42_RS12355;Dbxref=GenBank:WP_003898818.1;Name=WP_003898818.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;gene=atpF;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215822.1;locus_tag=AL42_RS12355;product=F0F1 ATP synthase subunit B;protein_id=WP_003898818.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1460218 1461558 . + . ID=gene-AL42_RS12360;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=AL42_RS12360;old_locus_tag=AL42_01358 NZ_KK316784.1 Protein Homology CDS 1460218 1461558 . + 0 ID=cds-WP_003406697.1;Parent=gene-AL42_RS12360;Dbxref=GenBank:WP_003406697.1;Name=WP_003406697.1;gbkey=CDS;gene=atpH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215823.1;locus_tag=AL42_RS12360;product=F0F1 ATP synthase subunit B/delta;protein_id=WP_003406697.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1461603 1463252 . + . ID=gene-AL42_RS12365;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=AL42_RS12365;old_locus_tag=AL42_01359 NZ_KK316784.1 Protein Homology CDS 1461603 1463252 . + 0 ID=cds-WP_003406699.1;Parent=gene-AL42_RS12365;Dbxref=GenBank:WP_003406699.1;Name=WP_003406699.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215824.1;locus_tag=AL42_RS12365;product=F0F1 ATP synthase subunit alpha;protein_id=WP_003406699.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1463259 1464176 . + . ID=gene-AL42_RS12370;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=AL42_RS12370;old_locus_tag=AL42_01360 NZ_KK316784.1 Protein Homology CDS 1463259 1464176 . + 0 ID=cds-WP_003898819.1;Parent=gene-AL42_RS12370;Dbxref=GenBank:WP_003898819.1;Name=WP_003898819.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215825.1;locus_tag=AL42_RS12370;product=F0F1 ATP synthase subunit gamma;protein_id=WP_003898819.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1464216 1465676 . + . ID=gene-AL42_RS12375;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=AL42_RS12375;old_locus_tag=AL42_01361 NZ_KK316784.1 Protein Homology CDS 1464216 1465676 . + 0 ID=cds-WP_003406701.1;Parent=gene-AL42_RS12375;Dbxref=GenBank:WP_003406701.1;Name=WP_003406701.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215826.1;locus_tag=AL42_RS12375;product=F0F1 ATP synthase subunit beta;protein_id=WP_003406701.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1465690 1466055 . + . ID=gene-AL42_RS12380;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=AL42_RS12380;old_locus_tag=AL42_01362 NZ_KK316784.1 Protein Homology CDS 1465690 1466055 . + 0 ID=cds-WP_003406708.1;Parent=gene-AL42_RS12380;Dbxref=GenBank:WP_003406708.1;Name=WP_003406708.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpC;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215827.1;locus_tag=AL42_RS12380;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_003406708.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1466063 1466506 . + . ID=gene-AL42_RS12385;Name=AL42_RS12385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12385;old_locus_tag=AL42_01363 NZ_KK316784.1 Protein Homology CDS 1466063 1466506 . + 0 ID=cds-WP_003406722.1;Parent=gene-AL42_RS12385;Dbxref=GenBank:WP_003406722.1;Name=WP_003406722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215828.1;locus_tag=AL42_RS12385;product=DUF2550 domain-containing protein;protein_id=WP_003406722.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1466546 1467880 . - . ID=gene-AL42_RS12390;Name=AL42_RS12390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12390;old_locus_tag=AL42_01364 NZ_KK316784.1 Protein Homology CDS 1466546 1467880 . - 0 ID=cds-WP_003900311.1;Parent=gene-AL42_RS12390;Dbxref=GenBank:WP_003900311.1;Name=WP_003900311.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215829.1;locus_tag=AL42_RS12390;product=ISL3-like element IS1557 family transposase;protein_id=WP_003900311.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1468046 1468627 . - . ID=gene-AL42_RS12395;Name=AL42_RS12395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12395;old_locus_tag=AL42_01365 NZ_KK316784.1 Protein Homology CDS 1468046 1468627 . - 0 ID=cds-WP_003406839.1;Parent=gene-AL42_RS12395;Dbxref=GenBank:WP_003406839.1;Name=WP_003406839.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215830.1;locus_tag=AL42_RS12395;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_003406839.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1468696 1469952 . + . ID=gene-AL42_RS12400;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=AL42_RS12400;old_locus_tag=AL42_01366 NZ_KK316784.1 Protein Homology CDS 1468696 1469952 . + 0 ID=cds-WP_003406845.1;Parent=gene-AL42_RS12400;Dbxref=GenBank:WP_003406845.1;Name=WP_003406845.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215831.1;locus_tag=AL42_RS12400;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_003406845.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1470224 1471755 . + . ID=gene-AL42_RS12405;Name=AL42_RS12405;gbkey=Gene;gene_biotype=rRNA;locus_tag=AL42_RS12405;old_locus_tag=AL42_01367 NZ_KK316784.1 cmsearch rRNA 1470224 1471755 . + . ID=rna-AL42_RS12405;Parent=gene-AL42_RS12405;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AL42_RS12405;product=16S ribosomal RNA NZ_KK316784.1 cmsearch exon 1470224 1471755 . + . ID=exon-AL42_RS12405-1;Parent=rna-AL42_RS12405;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AL42_RS12405;product=16S ribosomal RNA NZ_KK316784.1 RefSeq gene 1472033 1475170 . + . ID=gene-AL42_RS12410;Name=AL42_RS12410;gbkey=Gene;gene_biotype=rRNA;locus_tag=AL42_RS12410;old_locus_tag=AL42_01368 NZ_KK316784.1 cmsearch rRNA 1472033 1475170 . + . ID=rna-AL42_RS12410;Parent=gene-AL42_RS12410;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AL42_RS12410;product=23S ribosomal RNA NZ_KK316784.1 cmsearch exon 1472033 1475170 . + . ID=exon-AL42_RS12410-1;Parent=rna-AL42_RS12410;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AL42_RS12410;product=23S ribosomal RNA NZ_KK316784.1 RefSeq gene 1475275 1475387 . + . ID=gene-AL42_RS12415;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AL42_RS12415;old_locus_tag=AL42_01369 NZ_KK316784.1 cmsearch rRNA 1475275 1475387 . + . ID=rna-AL42_RS12415;Parent=gene-AL42_RS12415;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AL42_RS12415;product=5S ribosomal RNA NZ_KK316784.1 cmsearch exon 1475275 1475387 . + . ID=exon-AL42_RS12415-1;Parent=rna-AL42_RS12415;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AL42_RS12415;product=5S ribosomal RNA NZ_KK316784.1 RefSeq gene 1475509 1476006 . - . ID=gene-AL42_RS12420;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=AL42_RS12420;old_locus_tag=AL42_01370 NZ_KK316784.1 Protein Homology CDS 1475509 1476006 . - 0 ID=cds-WP_003406857.1;Parent=gene-AL42_RS12420;Dbxref=GenBank:WP_003406857.1;Name=WP_003406857.1;gbkey=CDS;gene=ogt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215832.1;locus_tag=AL42_RS12420;product=methylated-DNA--protein-cysteine methyltransferase;protein_id=WP_003406857.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1476003 1477493 . - . ID=gene-AL42_RS12425;Name=alkA;gbkey=Gene;gene=alkA;gene_biotype=protein_coding;locus_tag=AL42_RS12425;old_locus_tag=AL42_01371 NZ_KK316784.1 Protein Homology CDS 1476003 1477493 . - 0 ID=cds-WP_003406860.1;Parent=gene-AL42_RS12425;Dbxref=GenBank:WP_003406860.1;Name=WP_003406860.1;gbkey=CDS;gene=alkA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215833.1;locus_tag=AL42_RS12425;product=bifunctional regulatory protein/DNA repair enzyme AlkA;protein_id=WP_003406860.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1477574 1479199 . - . ID=gene-AL42_RS12430;Name=AL42_RS12430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12430;old_locus_tag=AL42_01372 NZ_KK316784.1 Protein Homology CDS 1477574 1479199 . - 0 ID=cds-WP_003406864.1;Parent=gene-AL42_RS12430;Dbxref=GenBank:WP_003406864.1;Name=WP_003406864.1;Ontology_term=GO:0007165,GO:0009190,GO:0035556,GO:0000166,GO:0009975,GO:0016779,GO:0016829,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,cyclase activity|0009975||IEA,nucleotidyltransferase activity|0016779||IEA,lyase activity|0016829||IEA,metal ion binding|0046872||IEA;go_process=signal transduction|0007165||IEA,cyclic nucleotide biosynthetic process|0009190||IEA,intracellular signal transduction|0035556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215834.1;locus_tag=AL42_RS12430;product=adenylate/guanylate cyclase domain-containing protein;protein_id=WP_003406864.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1479269 1480876 . - . ID=gene-AL42_RS12435;Name=AL42_RS12435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12435;old_locus_tag=AL42_01373 NZ_KK316784.1 Protein Homology CDS 1479269 1480876 . - 0 ID=cds-WP_031647532.1;Parent=gene-AL42_RS12435;Dbxref=GenBank:WP_031647532.1;Name=WP_031647532.1;Ontology_term=GO:0007165,GO:0009190,GO:0035556,GO:0000166,GO:0009975,GO:0016779,GO:0016829,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,cyclase activity|0009975||IEA,nucleotidyltransferase activity|0016779||IEA,lyase activity|0016829||IEA,metal ion binding|0046872||IEA;go_process=signal transduction|0007165||IEA,cyclic nucleotide biosynthetic process|0009190||IEA,intracellular signal transduction|0035556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215835.1;locus_tag=AL42_RS12435;product=adenylate/guanylate cyclase domain-containing protein;protein_id=WP_031647532.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1480889 1482592 . - . ID=gene-AL42_RS12440;Name=AL42_RS12440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12440;old_locus_tag=AL42_01374 NZ_KK316784.1 Protein Homology CDS 1480889 1482592 . - 0 ID=cds-WP_003898821.1;Parent=gene-AL42_RS12440;Dbxref=GenBank:WP_003898821.1;Name=WP_003898821.1;Ontology_term=GO:0007165,GO:0009190,GO:0035556,GO:0000166,GO:0009975,GO:0016779,GO:0016829,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,cyclase activity|0009975||IEA,nucleotidyltransferase activity|0016779||IEA,lyase activity|0016829||IEA,metal ion binding|0046872||IEA;go_process=signal transduction|0007165||IEA,cyclic nucleotide biosynthetic process|0009190||IEA,intracellular signal transduction|0035556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215836.1;locus_tag=AL42_RS12440;product=adenylate/guanylate cyclase domain-containing protein;protein_id=WP_003898821.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1482663 1483334 . + . ID=gene-AL42_RS12445;Name=nucS;gbkey=Gene;gene=nucS;gene_biotype=protein_coding;locus_tag=AL42_RS12445;old_locus_tag=AL42_01375 NZ_KK316784.1 Protein Homology CDS 1482663 1483334 . + 0 ID=cds-WP_003406872.1;Parent=gene-AL42_RS12445;Dbxref=GenBank:WP_003406872.1;Name=WP_003406872.1;Ontology_term=GO:0004519;gbkey=CDS;gene=nucS;go_function=endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011893218.1;locus_tag=AL42_RS12445;product=endonuclease NucS;protein_id=WP_003406872.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1483357 1483653 . + . ID=gene-AL42_RS12450;Name=AL42_RS12450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12450;old_locus_tag=AL42_01376 NZ_KK316784.1 Protein Homology CDS 1483357 1483653 . + 0 ID=cds-WP_003898823.1;Parent=gene-AL42_RS12450;Dbxref=GenBank:WP_003898823.1;Name=WP_003898823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215838.1;locus_tag=AL42_RS12450;product=hypothetical protein;protein_id=WP_003898823.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1483688 1484146 . - . ID=gene-AL42_RS12455;Name=mce;gbkey=Gene;gene=mce;gene_biotype=protein_coding;locus_tag=AL42_RS12455;old_locus_tag=AL42_01377 NZ_KK316784.1 Protein Homology CDS 1483688 1484146 . - 0 ID=cds-WP_003406879.1;Parent=gene-AL42_RS12455;Dbxref=GenBank:WP_003406879.1;Name=WP_003406879.1;gbkey=CDS;gene=mce;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177643.1;locus_tag=AL42_RS12455;product=methylmalonyl-CoA epimerase;protein_id=WP_003406879.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1484225 1485406 . + . ID=gene-AL42_RS12460;Name=AL42_RS12460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12460;old_locus_tag=AL42_01378 NZ_KK316784.1 Protein Homology CDS 1484225 1485406 . + 0 ID=cds-WP_023637385.1;Parent=gene-AL42_RS12460;Dbxref=GenBank:WP_023637385.1;Name=WP_023637385.1;Ontology_term=GO:0003985;gbkey=CDS;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020726153.1;locus_tag=AL42_RS12460;product=acetyl-CoA C-acetyltransferase;protein_id=WP_023637385.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1485536 1486450 . + . ID=gene-AL42_RS12465;Name=AL42_RS12465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12465;old_locus_tag=AL42_01379 NZ_KK316784.1 Protein Homology CDS 1485536 1486450 . + 0 ID=cds-WP_003406887.1;Parent=gene-AL42_RS12465;Dbxref=GenBank:WP_003406887.1;Name=WP_003406887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215840.1;locus_tag=AL42_RS12465;product=thioredoxin family protein;protein_id=WP_003406887.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1486529 1488304 . - . ID=gene-AL42_RS12470;Name=AL42_RS12470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12470;old_locus_tag=AL42_01380 NZ_KK316784.1 Protein Homology CDS 1486529 1488304 . - 0 ID=cds-WP_014584742.1;Parent=gene-AL42_RS12470;Dbxref=GenBank:WP_014584742.1;Name=WP_014584742.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177799.1;locus_tag=AL42_RS12470;product=PE family protein;protein_id=WP_014584742.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1488456 1490651 . - . ID=gene-AL42_RS12475;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=AL42_RS12475;old_locus_tag=AL42_01381 NZ_KK316784.1 Protein Homology CDS 1488456 1490651 . - 0 ID=cds-WP_003901134.1;Parent=gene-AL42_RS12475;Dbxref=GenBank:WP_003901134.1;Name=WP_003901134.1;Ontology_term=GO:0005975,GO:0005978,GO:0003844,GO:0004553,GO:0043169;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA,hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,cation binding|0043169||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215842.1;locus_tag=AL42_RS12475;product=1%2C4-alpha-glucan branching protein GlgB;protein_id=WP_003901134.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1490659 1492725 . - . ID=gene-AL42_RS12480;Name=glgE;gbkey=Gene;gene=glgE;gene_biotype=protein_coding;locus_tag=AL42_RS12480;old_locus_tag=AL42_01382 NZ_KK316784.1 Protein Homology CDS 1490659 1492725 . - 0 ID=cds-WP_003915171.1;Parent=gene-AL42_RS12480;Dbxref=GenBank:WP_003915171.1;Name=WP_003915171.1;gbkey=CDS;gene=glgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003915171.1;locus_tag=AL42_RS12480;product=alpha-1%2C4-glucan:maltose-1-phosphate maltosyltransferase;protein_id=WP_003915171.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1492903 1495494 . + . ID=gene-AL42_RS12485;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=AL42_RS12485;old_locus_tag=AL42_01383 NZ_KK316784.1 Protein Homology CDS 1492903 1495494 . + 0 ID=cds-WP_003901135.1;Parent=gene-AL42_RS12485;Dbxref=GenBank:WP_003901135.1;Name=WP_003901135.1;gbkey=CDS;gene=glgP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215844.1;locus_tag=AL42_RS12485;product=glycosyltransferase family 1 protein;protein_id=WP_003901135.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1495534 1497528 . - . ID=gene-AL42_RS12490;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=AL42_RS12490;old_locus_tag=AL42_01384 NZ_KK316784.1 Protein Homology CDS 1495534 1497528 . - 0 ID=cds-WP_003901136.1;Parent=gene-AL42_RS12490;Dbxref=GenBank:WP_003901136.1;Name=WP_003901136.1;gbkey=CDS;gene=dinG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215845.1;locus_tag=AL42_RS12490;product=ATP-dependent helicase DinG;protein_id=WP_003901136.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1497552 1498898 . - . ID=gene-AL42_RS12495;Name=AL42_RS12495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12495;old_locus_tag=AL42_01385 NZ_KK316784.1 Protein Homology CDS 1497552 1498898 . - 0 ID=cds-WP_003900321.1;Parent=gene-AL42_RS12495;Dbxref=GenBank:WP_003900321.1;Name=WP_003900321.1;Ontology_term=GO:0009435,GO:0004514,GO:0004516;gbkey=CDS;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA,nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215846.2;locus_tag=AL42_RS12495;product=nicotinate phosphoribosyltransferase;protein_id=WP_003900321.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1499000 1499305 . + . ID=gene-AL42_RS12500;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=AL42_RS12500;old_locus_tag=AL42_01386 NZ_KK316784.1 Protein Homology CDS 1499000 1499305 . + 0 ID=cds-WP_003406906.1;Parent=gene-AL42_RS12500;Dbxref=GenBank:WP_003406906.1;Name=WP_003406906.1;Ontology_term=GO:0006508;gbkey=CDS;gene=clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215847.1;locus_tag=AL42_RS12500;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_003406906.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1499331 1499921 . + . ID=gene-AL42_RS12505;Name=AL42_RS12505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12505;old_locus_tag=AL42_01387 NZ_KK316784.1 Protein Homology CDS 1499331 1499921 . + 0 ID=cds-WP_003406907.1;Parent=gene-AL42_RS12505;Dbxref=GenBank:WP_003406907.1;Name=WP_003406907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008254882.1;locus_tag=AL42_RS12505;product=oxidative stress transcriptional regulator AosR;protein_id=WP_003406907.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1499938 1500972 . + . ID=gene-AL42_RS12510;Name=AL42_RS12510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12510;old_locus_tag=AL42_01388 NZ_KK316784.1 Protein Homology CDS 1499938 1500972 . + 0 ID=cds-WP_003406908.1;Parent=gene-AL42_RS12510;Dbxref=GenBank:WP_003406908.1;Name=WP_003406908.1;Ontology_term=GO:0006508,GO:0004177;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215849.1;locus_tag=AL42_RS12510;product=P1 family peptidase;protein_id=WP_003406908.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1500980 1501420 . + . ID=gene-AL42_RS12515;Name=mec;gbkey=Gene;gene=mec;gene_biotype=protein_coding;locus_tag=AL42_RS12515;old_locus_tag=AL42_01389 NZ_KK316784.1 Protein Homology CDS 1500980 1501420 . + 0 ID=cds-WP_003898830.1;Parent=gene-AL42_RS12515;Dbxref=GenBank:WP_003898830.1;Name=WP_003898830.1;gbkey=CDS;gene=mec;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215850.1;locus_tag=AL42_RS12515;product=CysO-cysteine peptidase;protein_id=WP_003898830.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1501442 1501723 . + . ID=gene-AL42_RS12520;Name=cysO;gbkey=Gene;gene=cysO;gene_biotype=protein_coding;locus_tag=AL42_RS12520;old_locus_tag=AL42_01390 NZ_KK316784.1 Protein Homology CDS 1501442 1501723 . + 0 ID=cds-WP_003406910.1;Parent=gene-AL42_RS12520;Dbxref=GenBank:WP_003406910.1;Name=WP_003406910.1;gbkey=CDS;gene=cysO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215851.1;locus_tag=AL42_RS12520;product=sulfur carrier protein CysO;protein_id=WP_003406910.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1501733 1502704 . + . ID=gene-AL42_RS12525;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=AL42_RS12525;old_locus_tag=AL42_01391 NZ_KK316784.1 Protein Homology CDS 1501733 1502704 . + 0 ID=cds-WP_003406912.1;Parent=gene-AL42_RS12525;Dbxref=GenBank:WP_003406912.1;Name=WP_003406912.1;gbkey=CDS;gene=cysM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215852.1;locus_tag=AL42_RS12525;product=O-phosphoserine sulfhydrylase;protein_id=WP_003406912.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1502695 1503417 . + . ID=gene-AL42_RS12530;Name=AL42_RS12530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12530;old_locus_tag=AL42_01392 NZ_KK316784.1 Protein Homology CDS 1502695 1503417 . + 0 ID=cds-WP_003898831.1;Parent=gene-AL42_RS12530;Dbxref=GenBank:WP_003898831.1;Name=WP_003898831.1;Ontology_term=GO:0006508,GO:0004252,GO:0008270,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215853.1;locus_tag=AL42_RS12530;product=rhomboid family intramembrane serine protease;protein_id=WP_003898831.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1503414 1504229 . + . ID=gene-AL42_RS12535;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=AL42_RS12535;old_locus_tag=AL42_01393 NZ_KK316784.1 Protein Homology CDS 1503414 1504229 . + 0 ID=cds-WP_003406919.1;Parent=gene-AL42_RS12535;Dbxref=GenBank:WP_003406919.1;Name=WP_003406919.1;Ontology_term=GO:0009252,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215854.1;locus_tag=AL42_RS12535;product=glutamate racemase;protein_id=WP_003406919.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1504301 1505077 . + . ID=gene-AL42_RS12540;Name=AL42_RS12540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12540;old_locus_tag=AL42_01394 NZ_KK316784.1 Protein Homology CDS 1504301 1505077 . + 0 ID=cds-WP_009936344.1;Parent=gene-AL42_RS12540;Dbxref=GenBank:WP_009936344.1;Name=WP_009936344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009936344.1;locus_tag=AL42_RS12540;product=cyclic nucleotide-degrading phosphodiesterase;protein_id=WP_009936344.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1505094 1505873 . + . ID=gene-AL42_RS12545;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=AL42_RS12545;old_locus_tag=AL42_01395 NZ_KK316784.1 Protein Homology CDS 1505094 1505873 . + 0 ID=cds-WP_003406926.1;Parent=gene-AL42_RS12545;Dbxref=GenBank:WP_003406926.1;Name=WP_003406926.1;Ontology_term=GO:0008033,GO:0000049,GO:0009022;gbkey=CDS;gene=rph;go_function=tRNA binding|0000049||IEA,tRNA nucleotidyltransferase activity|0009022||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215856.1;locus_tag=AL42_RS12545;product=ribonuclease PH;protein_id=WP_003406926.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1505912 1506526 . + . ID=gene-AL42_RS12550;Name=rdgB;gbkey=Gene;gene=rdgB;gene_biotype=protein_coding;locus_tag=AL42_RS12550;old_locus_tag=AL42_01396 NZ_KK316784.1 Protein Homology CDS 1505912 1506526 . + 0 ID=cds-WP_003406931.1;Parent=gene-AL42_RS12550;Dbxref=GenBank:WP_003406931.1;Name=WP_003406931.1;Ontology_term=GO:0006281,GO:0035870,GO:0036222;gbkey=CDS;gene=rdgB;go_function=dITP diphosphatase activity|0035870||IEA,XTP diphosphatase activity|0036222||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215857.1;locus_tag=AL42_RS12550;product=RdgB/HAM1 family non-canonical purine NTP pyrophosphatase;protein_id=WP_003406931.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1506523 1506885 . - . ID=gene-AL42_RS12555;Name=AL42_RS12555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12555;old_locus_tag=AL42_01397 NZ_KK316784.1 Protein Homology CDS 1506523 1506885 . - 0 ID=cds-WP_003406937.1;Parent=gene-AL42_RS12555;Dbxref=GenBank:WP_003406937.1;Name=WP_003406937.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177800.1;locus_tag=AL42_RS12555;product=DUF3817 domain-containing protein;protein_id=WP_003406937.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1506882 1507262 . - . ID=gene-AL42_RS12560;Name=AL42_RS12560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12560;old_locus_tag=AL42_01398 NZ_KK316784.1 Protein Homology CDS 1506882 1507262 . - 0 ID=cds-WP_003898833.1;Parent=gene-AL42_RS12560;Dbxref=GenBank:WP_003898833.1;Name=WP_003898833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215859.1;locus_tag=AL42_RS12560;product=hypothetical protein;protein_id=WP_003898833.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1507373 1507627 . + . ID=gene-AL42_RS0104645;Name=AL42_RS0104645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0104645;old_locus_tag=AL42_01399 NZ_KK316784.1 Protein Homology CDS 1507373 1507627 . + 0 ID=cds-WP_003911484.1;Parent=gene-AL42_RS0104645;Dbxref=GenBank:WP_003911484.1;Name=WP_003911484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911484.1;locus_tag=AL42_RS0104645;product=acyl carrier protein;protein_id=WP_003911484.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1507620 1509185 . + . ID=gene-AL42_RS12565;Name=mbtM;gbkey=Gene;gene=mbtM;gene_biotype=protein_coding;locus_tag=AL42_RS12565;old_locus_tag=AL42_01400 NZ_KK316784.1 Protein Homology CDS 1507620 1509185 . + 0 ID=cds-WP_003406950.1;Parent=gene-AL42_RS12565;Dbxref=GenBank:WP_003406950.1;Name=WP_003406950.1;gbkey=CDS;gene=mbtM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215861.1;locus_tag=AL42_RS12565;product=long-chain-fatty acid--ACP ligase MbtM;protein_id=WP_003406950.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1509185 1510345 . + . ID=gene-AL42_RS12570;Name=mbtN;gbkey=Gene;gene=mbtN;gene_biotype=protein_coding;locus_tag=AL42_RS12570;old_locus_tag=AL42_01401 NZ_KK316784.1 Protein Homology CDS 1509185 1510345 . + 0 ID=cds-WP_003406953.1;Parent=gene-AL42_RS12570;Dbxref=GenBank:WP_003406953.1;Name=WP_003406953.1;gbkey=CDS;gene=mbtN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215862.1;locus_tag=AL42_RS12570;product=acyl-ACP dehydrogenase MbtN;protein_id=WP_003406953.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1510312 1510944 . - . ID=gene-AL42_RS12575;Name=mbtK;gbkey=Gene;gene=mbtK;gene_biotype=protein_coding;locus_tag=AL42_RS12575;old_locus_tag=AL42_01402 NZ_KK316784.1 Protein Homology CDS 1510312 1510944 . - 0 ID=cds-WP_003406956.1;Parent=gene-AL42_RS12575;Dbxref=GenBank:WP_003406956.1;Name=WP_003406956.1;gbkey=CDS;gene=mbtK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215863.1;locus_tag=AL42_RS12575;product=lysine N-acyltransferase MbtK;protein_id=WP_003406956.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1511067 1511150 . + . ID=gene-AL42_RS12580;Name=AL42_RS12580;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL42_RS12580;old_locus_tag=AL42_01403 NZ_KK316784.1 tRNAscan-SE tRNA 1511067 1511150 . + . ID=rna-AL42_RS12580;Parent=gene-AL42_RS12580;anticodon=(pos:1511101..1511103);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS12580;product=tRNA-Leu NZ_KK316784.1 tRNAscan-SE exon 1511067 1511150 . + . ID=exon-AL42_RS12580-1;Parent=rna-AL42_RS12580;anticodon=(pos:1511101..1511103);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS12580;product=tRNA-Leu NZ_KK316784.1 RefSeq gene 1511386 1513965 . + . ID=gene-AL42_RS12585;Name=irtA;gbkey=Gene;gene=irtA;gene_biotype=protein_coding;locus_tag=AL42_RS12585;old_locus_tag=AL42_01404 NZ_KK316784.1 Protein Homology CDS 1511386 1513965 . + 0 ID=cds-WP_031721805.1;Parent=gene-AL42_RS12585;Dbxref=GenBank:WP_031721805.1;Name=WP_031721805.1;gbkey=CDS;gene=irtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215864.1;locus_tag=AL42_RS12585;product=iron ABC transporter ATP-binding protein/permease IrtA;protein_id=WP_031721805.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1513962 1515701 . + . ID=gene-AL42_RS12590;Name=irtB;gbkey=Gene;gene=irtB;gene_biotype=protein_coding;locus_tag=AL42_RS12590;old_locus_tag=AL42_01405 NZ_KK316784.1 Protein Homology CDS 1513962 1515701 . + 0 ID=cds-WP_003900322.1;Parent=gene-AL42_RS12590;Dbxref=GenBank:WP_003900322.1;Name=WP_003900322.1;gbkey=CDS;gene=irtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215865.1;locus_tag=AL42_RS12590;product=iron ABC transporter ATP-binding protein/permease IrtB;protein_id=WP_003900322.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1515694 1515864 . - . ID=gene-AL42_RS25765;Name=AL42_RS25765;end_range=1515864,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS25765;partial=true;pseudo=true;start_range=.,1515694 NZ_KK316784.1 Protein Homology CDS 1515694 1515864 . - 0 ID=cds-AL42_RS25765;Parent=gene-AL42_RS25765;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0016627;end_range=1515864,.;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009952867.1;locus_tag=AL42_RS25765;partial=true;product=acyl-CoA dehydrogenase family protein;pseudo=true;start_range=.,1515694;transl_table=11 NZ_KK316784.1 RefSeq gene 1515830 1516573 . + . ID=gene-AL42_RS12595;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=AL42_RS12595;old_locus_tag=AL42_01406 NZ_KK316784.1 Protein Homology CDS 1515830 1516573 . + 0 ID=cds-WP_003406963.1;Parent=gene-AL42_RS12595;Dbxref=GenBank:WP_003406963.1;Name=WP_003406963.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215866.1;locus_tag=AL42_RS12595;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_003406963.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1516584 1516646 . + . ID=gene-AL42_RS28120;Name=AL42_RS28120;end_range=1516646,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS28120;partial=true;pseudo=true NZ_KK316784.1 Protein Homology CDS 1516584 1516646 . + 0 ID=cds-AL42_RS28120;Parent=gene-AL42_RS28120;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1516646,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014790.6;locus_tag=AL42_RS28120;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1516627 1516899 . + . ID=gene-AL42_RS0104650;Name=AL42_RS0104650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS0104650;pseudo=true NZ_KK316784.1 Protein Homology CDS 1516627 1516899 . + 0 ID=cds-AL42_RS0104650;Parent=gene-AL42_RS0104650;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003918231.1;locus_tag=AL42_RS0104650;product=hypothetical protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 1517102 1517473 . + . ID=gene-AL42_RS12600;Name=AL42_RS12600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12600;old_locus_tag=AL42_01408 NZ_KK316784.1 Protein Homology CDS 1517102 1517473 . + 0 ID=cds-WP_003406967.1;Parent=gene-AL42_RS12600;Dbxref=GenBank:WP_003406967.1;Name=WP_003406967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215868.1;locus_tag=AL42_RS12600;product=hypothetical protein;protein_id=WP_003406967.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1517539 1518324 . - . ID=gene-AL42_RS12605;Name=AL42_RS12605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12605;old_locus_tag=AL42_01409 NZ_KK316784.1 Protein Homology CDS 1517539 1518324 . - 0 ID=cds-WP_003898836.1;Parent=gene-AL42_RS12605;Dbxref=GenBank:WP_003898836.1;Name=WP_003898836.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215869.1;locus_tag=AL42_RS12605;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003898836.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1518344 1520215 . - . ID=gene-AL42_RS12610;Name=AL42_RS12610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12610;old_locus_tag=AL42_01410 NZ_KK316784.1 Protein Homology CDS 1518344 1520215 . - 0 ID=cds-WP_003898837.1;Parent=gene-AL42_RS12610;Dbxref=GenBank:WP_003898837.1;Name=WP_003898837.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215870.1;locus_tag=AL42_RS12610;product=putative bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_003898837.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1520224 1522371 . - . ID=gene-AL42_RS12615;Name=moeY;gbkey=Gene;gene=moeY;gene_biotype=protein_coding;locus_tag=AL42_RS12615;old_locus_tag=AL42_01411 NZ_KK316784.1 Protein Homology CDS 1520224 1522371 . - 0 ID=cds-WP_003898838.1;Parent=gene-AL42_RS12615;Dbxref=GenBank:WP_003898838.1;Name=WP_003898838.1;Ontology_term=GO:0016491;gbkey=CDS;gene=moeY;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215871.1;locus_tag=AL42_RS12615;product=Rv1355c family protein;protein_id=WP_003898838.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1522368 1523123 . - . ID=gene-AL42_RS12620;Name=AL42_RS12620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12620;old_locus_tag=AL42_01412 NZ_KK316784.1 Protein Homology CDS 1522368 1523123 . - 0 ID=cds-WP_003911502.1;Parent=gene-AL42_RS12620;Dbxref=GenBank:WP_003911502.1;Name=WP_003911502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911502.1;locus_tag=AL42_RS12620;product=hypothetical protein;protein_id=WP_003911502.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1523632 1524555 . - . ID=gene-AL42_RS12625;Name=AL42_RS12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12625;old_locus_tag=AL42_01413 NZ_KK316784.1 Protein Homology CDS 1523632 1524555 . - 0 ID=cds-WP_003406987.1;Parent=gene-AL42_RS12625;Dbxref=GenBank:WP_003406987.1;Name=WP_003406987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215873.1;locus_tag=AL42_RS12625;product=cyclic diguanylate phosphodiesterase;protein_id=WP_003406987.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1524575 1524715 . - . ID=gene-AL42_RS27160;Name=AL42_RS27160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27160 NZ_KK316784.1 Protein Homology CDS 1524575 1524715 . - 0 ID=cds-WP_009940161.1;Parent=gene-AL42_RS27160;Dbxref=GenBank:WP_009940161.1;Name=WP_009940161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009940161.1;locus_tag=AL42_RS27160;product=hypothetical protein;protein_id=WP_009940161.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1524951 1528430 . + . ID=gene-AL42_RS12630;Name=AL42_RS12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12630;old_locus_tag=AL42_01414 NZ_KK316784.1 Protein Homology CDS 1524951 1528430 . + 0 ID=cds-WP_031721806.1;Parent=gene-AL42_RS12630;Dbxref=GenBank:WP_031721806.1;Name=WP_031721806.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215874.1;locus_tag=AL42_RS12630;product=helix-turn-helix transcriptional regulator;protein_id=WP_031721806.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1528626 1529264 . + . ID=gene-AL42_RS12635;Name=AL42_RS12635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12635;old_locus_tag=AL42_01415 NZ_KK316784.1 GeneMarkS-2+ CDS 1528626 1529264 . + 0 ID=cds-WP_194164305.1;Parent=gene-AL42_RS12635;Dbxref=GenBank:WP_194164305.1;Name=WP_194164305.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL42_RS12635;product=nucleotidyl cyclase domain-containing protein;protein_id=WP_194164305.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1529312 1529548 . - . ID=gene-AL42_RS12640;Name=AL42_RS12640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12640 NZ_KK316784.1 Protein Homology CDS 1529312 1529548 . - 0 ID=cds-WP_003407054.1;Parent=gene-AL42_RS12640;Dbxref=GenBank:WP_003407054.1;Name=WP_003407054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015627344.1;locus_tag=AL42_RS12640;product=hypothetical protein;protein_id=WP_003407054.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1529687 1530709 . + . ID=gene-AL42_RS12645;Name=AL42_RS12645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12645;old_locus_tag=AL42_01416 NZ_KK316784.1 Protein Homology CDS 1529687 1530709 . + 0 ID=cds-WP_003898842.1;Parent=gene-AL42_RS12645;Dbxref=GenBank:WP_003898842.1;Name=WP_003898842.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215876.1;locus_tag=AL42_RS12645;product=LLM class F420-dependent oxidoreductase;protein_id=WP_003898842.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1530782 1531972 . - . ID=gene-AL42_RS12650;Name=AL42_RS12650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12650;old_locus_tag=AL42_01417 NZ_KK316784.1 Protein Homology CDS 1530782 1531972 . - 0 ID=cds-WP_003901140.1;Parent=gene-AL42_RS12650;Dbxref=GenBank:WP_003901140.1;Name=WP_003901140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177801.1;locus_tag=AL42_RS12650;product=PPE family protein PPE19;protein_id=WP_003901140.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1532287 1532949 . - . ID=gene-AL42_RS12655;Name=AL42_RS12655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12655;old_locus_tag=AL42_01418 NZ_KK316784.1 Protein Homology CDS 1532287 1532949 . - 0 ID=cds-WP_003407152.1;Parent=gene-AL42_RS12655;Dbxref=GenBank:WP_003407152.1;Name=WP_003407152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215878.1;locus_tag=AL42_RS12655;product=membrane protein;protein_id=WP_003407152.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1532946 1533731 . - . ID=gene-AL42_RS12660;Name=AL42_RS12660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12660;old_locus_tag=AL42_01419 NZ_KK316784.1 Protein Homology CDS 1532946 1533731 . - 0 ID=cds-WP_003407157.1;Parent=gene-AL42_RS12660;Dbxref=GenBank:WP_003407157.1;Name=WP_003407157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215879.1;locus_tag=AL42_RS12660;product=membrane protein;protein_id=WP_003407157.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1534022 1535983 . - . ID=gene-AL42_RS12665;Name=AL42_RS12665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12665;old_locus_tag=AL42_01420 NZ_KK316784.1 Protein Homology CDS 1534022 1535983 . - 0 ID=cds-WP_003407159.1;Parent=gene-AL42_RS12665;Dbxref=GenBank:WP_003407159.1;Name=WP_003407159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177802.1;locus_tag=AL42_RS12665;product=sigma-F factor regulator;protein_id=WP_003407159.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1536122 1536508 . - . ID=gene-AL42_RS12670;Name=rsfA;gbkey=Gene;gene=rsfA;gene_biotype=protein_coding;locus_tag=AL42_RS12670;old_locus_tag=AL42_01421 NZ_KK316784.1 Protein Homology CDS 1536122 1536508 . - 0 ID=cds-WP_003898845.1;Parent=gene-AL42_RS12670;Dbxref=GenBank:WP_003898845.1;Name=WP_003898845.1;gbkey=CDS;gene=rsfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215881.1;locus_tag=AL42_RS12670;product=anti-sigma-F factor antagonist RsfA;protein_id=WP_003898845.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1536729 1537550 . + . ID=gene-AL42_RS12675;Name=AL42_RS12675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12675;old_locus_tag=AL42_01422 NZ_KK316784.1 Protein Homology CDS 1536729 1537550 . + 0 ID=cds-WP_003407164.1;Parent=gene-AL42_RS12675;Dbxref=GenBank:WP_003407164.1;Name=WP_003407164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215882.1;locus_tag=AL42_RS12675;product=GTP pyrophosphokinase;protein_id=WP_003407164.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1537543 1537779 . + . ID=gene-AL42_RS12680;Name=AL42_RS12680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12680;old_locus_tag=AL42_01423 NZ_KK316784.1 Protein Homology CDS 1537543 1537779 . + 0 ID=cds-WP_003407167.1;Parent=gene-AL42_RS12680;Dbxref=GenBank:WP_003407167.1;Name=WP_003407167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003407167.1;locus_tag=AL42_RS12680;product=hypothetical protein;protein_id=WP_003407167.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1537851 1539056 . - . ID=gene-AL42_RS12685;Name=AL42_RS12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12685;old_locus_tag=AL42_01424 NZ_KK316784.1 Protein Homology CDS 1537851 1539056 . - 0 ID=cds-WP_003918234.1;Parent=gene-AL42_RS12685;Dbxref=GenBank:WP_003918234.1;Name=WP_003918234.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015355830.1;locus_tag=AL42_RS12685;product=serine hydrolase domain-containing protein;protein_id=WP_003918234.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1539359 1540144 . + . ID=gene-AL42_RS12690;Name=lprF;gbkey=Gene;gene=lprF;gene_biotype=protein_coding;locus_tag=AL42_RS12690;old_locus_tag=AL42_01425 NZ_KK316784.1 Protein Homology CDS 1539359 1540144 . + 0 ID=cds-WP_003902048.1;Parent=gene-AL42_RS12690;Dbxref=GenBank:WP_003902048.1;Name=WP_003902048.1;gbkey=CDS;gene=lprF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215884.1;locus_tag=AL42_RS12690;product=lipoprotein LprF;protein_id=WP_003902048.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1540422 1541683 . - . ID=gene-AL42_RS12695;Name=AL42_RS12695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12695;old_locus_tag=AL42_01426 NZ_KK316784.1 Protein Homology CDS 1541395 1541683 . - 0 ID=cds-WP_087902221.1-2;Parent=gene-AL42_RS12695;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL42_RS12695;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316784.1 Protein Homology CDS 1540422 1541395 . - 2 ID=cds-WP_087902221.1-2;Parent=gene-AL42_RS12695;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL42_RS12695;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1541734 1542594 . + . ID=gene-AL42_RS12705;Name=AL42_RS12705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS12705;old_locus_tag=AL42_01428;partial=true;pseudo=true;start_range=.,1541734 NZ_KK316784.1 Protein Homology CDS 1541734 1542594 . + 0 ID=cds-AL42_RS12705;Parent=gene-AL42_RS12705;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215887.1;locus_tag=AL42_RS12705;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1541734;transl_table=11 NZ_KK316784.1 RefSeq gene 1542591 1543772 . + . ID=gene-AL42_RS12710;Name=AL42_RS12710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12710;old_locus_tag=AL42_01429 NZ_KK316784.1 Protein Homology CDS 1542591 1543772 . + 0 ID=cds-WP_003407185.1;Parent=gene-AL42_RS12710;Dbxref=GenBank:WP_003407185.1;Name=WP_003407185.1;Ontology_term=GO:0030639,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=polyketide biosynthetic process|0030639||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177803.1;locus_tag=AL42_RS12710;product=type III polyketide synthase;protein_id=WP_003407185.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1543778 1544758 . + . ID=gene-AL42_RS12715;Name=AL42_RS12715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12715;old_locus_tag=AL42_01430 NZ_KK316784.1 Protein Homology CDS 1543778 1544758 . + 0 ID=cds-WP_003903426.1;Parent=gene-AL42_RS12715;Dbxref=GenBank:WP_003903426.1;Name=WP_003903426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215889.1;locus_tag=AL42_RS12715;product=glycolipid sulfotransferase;protein_id=WP_003903426.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1544838 1545296 . - . ID=gene-AL42_RS12720;Name=AL42_RS12720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12720;old_locus_tag=AL42_01431 NZ_KK316784.1 Protein Homology CDS 1544838 1545296 . - 0 ID=cds-WP_003901145.1;Parent=gene-AL42_RS12720;Dbxref=GenBank:WP_003901145.1;Name=WP_003901145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215890.2;locus_tag=AL42_RS12720;product=hypothetical protein;protein_id=WP_003901145.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1545598 1546917 . + . ID=gene-AL42_RS12725;Name=AL42_RS12725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12725;old_locus_tag=AL42_01432 NZ_KK316784.1 Protein Homology CDS 1545598 1546917 . + 0 ID=cds-WP_003898850.1;Parent=gene-AL42_RS12725;Dbxref=GenBank:WP_003898850.1;Name=WP_003898850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215891.1;locus_tag=AL42_RS12725;product=YcaO-like family protein;protein_id=WP_003898850.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1546914 1548407 . + . ID=gene-AL42_RS12730;Name=AL42_RS12730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12730;old_locus_tag=AL42_01433 NZ_KK316784.1 Protein Homology CDS 1546914 1548407 . + 0 ID=cds-WP_003900327.1;Parent=gene-AL42_RS12730;Dbxref=GenBank:WP_003900327.1;Name=WP_003900327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215892.1;locus_tag=AL42_RS12730;product=TfuA-like protein;protein_id=WP_003900327.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1548345 1548983 . - . ID=gene-AL42_RS12735;Name=AL42_RS12735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12735;old_locus_tag=AL42_01434 NZ_KK316784.1 Protein Homology CDS 1548345 1548983 . - 0 ID=cds-WP_003898852.1;Parent=gene-AL42_RS12735;Dbxref=GenBank:WP_003898852.1;Name=WP_003898852.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215893.1;locus_tag=AL42_RS12735;product=class I SAM-dependent methyltransferase;protein_id=WP_003898852.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1548994 1550283 . - . ID=gene-AL42_RS12740;Name=AL42_RS12740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12740;old_locus_tag=AL42_01435 NZ_KK316784.1 Protein Homology CDS 1548994 1550283 . - 0 ID=cds-WP_003911527.1;Parent=gene-AL42_RS12740;Dbxref=GenBank:WP_003911527.1;Name=WP_003911527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911527.1;locus_tag=AL42_RS12740;product=HNH endonuclease;protein_id=WP_003911527.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1550420 1551001 . + . ID=gene-AL42_RS12745;Name=pyrR;gbkey=Gene;gene=pyrR;gene_biotype=protein_coding;locus_tag=AL42_RS12745;old_locus_tag=AL42_01436 NZ_KK316784.1 Protein Homology CDS 1550420 1551001 . + 0 ID=cds-WP_003407196.1;Parent=gene-AL42_RS12745;Dbxref=GenBank:WP_003407196.1;Name=WP_003407196.1;Ontology_term=GO:0009116;gbkey=CDS;gene=pyrR;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215895.1;locus_tag=AL42_RS12745;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;protein_id=WP_003407196.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1550998 1551957 . + . ID=gene-AL42_RS12750;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=AL42_RS12750;old_locus_tag=AL42_01437 NZ_KK316784.1 Protein Homology CDS 1550998 1551957 . + 0 ID=cds-WP_003407200.1;Parent=gene-AL42_RS12750;Dbxref=GenBank:WP_003407200.1;Name=WP_003407200.1;Ontology_term=GO:0006207,GO:0006520,GO:0004070,GO:0016597;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA,amino acid binding|0016597||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215896.1;locus_tag=AL42_RS12750;product=aspartate carbamoyltransferase catalytic subunit;protein_id=WP_003407200.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1551954 1553246 . + . ID=gene-AL42_RS12755;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=AL42_RS12755;old_locus_tag=AL42_01438 NZ_KK316784.1 Protein Homology CDS 1551954 1553246 . + 0 ID=cds-WP_003407204.1;Parent=gene-AL42_RS12755;Dbxref=GenBank:WP_003407204.1;Name=WP_003407204.1;gbkey=CDS;gene=pyrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215897.1;locus_tag=AL42_RS12755;product=dihydroorotase;protein_id=WP_003407204.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1553243 1553740 . + . ID=gene-AL42_RS12760;Name=AL42_RS12760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12760;old_locus_tag=AL42_01439 NZ_KK316784.1 Protein Homology CDS 1553243 1553740 . + 0 ID=cds-WP_003898853.1;Parent=gene-AL42_RS12760;Dbxref=GenBank:WP_003898853.1;Name=WP_003898853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215898.1;locus_tag=AL42_RS12760;product=PH-like domain-containing protein;protein_id=WP_003898853.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1553737 1554867 . + . ID=gene-AL42_RS12765;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=AL42_RS12765;old_locus_tag=AL42_01440 NZ_KK316784.1 Protein Homology CDS 1553737 1554867 . + 0 ID=cds-WP_003902052.1;Parent=gene-AL42_RS12765;Dbxref=GenBank:WP_003902052.1;Name=WP_003902052.1;Ontology_term=GO:0006207,GO:0006541,GO:0004088;gbkey=CDS;gene=carA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215899.1;locus_tag=AL42_RS12765;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_003902052.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1554867 1558214 . + . ID=gene-AL42_RS12770;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=AL42_RS12770;old_locus_tag=AL42_01441 NZ_KK316784.1 Protein Homology CDS 1554867 1558214 . + 0 ID=cds-WP_003898855.1;Parent=gene-AL42_RS12770;Dbxref=GenBank:WP_003898855.1;Name=WP_003898855.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177804.1;locus_tag=AL42_RS12770;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_003898855.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1558211 1559035 . + . ID=gene-AL42_RS12775;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=AL42_RS12775;old_locus_tag=AL42_01442 NZ_KK316784.1 Protein Homology CDS 1558211 1559035 . + 0 ID=cds-WP_003407220.1;Parent=gene-AL42_RS12775;Dbxref=GenBank:WP_003407220.1;Name=WP_003407220.1;Ontology_term=GO:0006221,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215901.1;locus_tag=AL42_RS12775;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_003407220.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1559230 1559538 . + . ID=gene-AL42_RS12780;Name=AL42_RS12780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12780;old_locus_tag=AL42_01443 NZ_KK316784.1 Protein Homology CDS 1559230 1559538 . + 0 ID=cds-WP_003407225.1;Parent=gene-AL42_RS12780;Dbxref=GenBank:WP_003407225.1;Name=WP_003407225.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177805.1;locus_tag=AL42_RS12780;product=PE family protein;protein_id=WP_003407225.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1559535 1561154 . + . ID=gene-AL42_RS12785;Name=AL42_RS12785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12785;old_locus_tag=AL42_01444 NZ_KK316784.1 Protein Homology CDS 1559535 1561154 . + 0 ID=cds-WP_003905549.1;Parent=gene-AL42_RS12785;Dbxref=GenBank:WP_003905549.1;Name=WP_003905549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177806.1;locus_tag=AL42_RS12785;product=PPE family protein;protein_id=WP_003905549.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1561715 1562032 . + . ID=gene-AL42_RS26840;Name=mihF;gbkey=Gene;gene=mihF;gene_biotype=protein_coding;locus_tag=AL42_RS26840 NZ_KK316784.1 Protein Homology CDS 1561715 1562032 . + 0 ID=cds-WP_003407240.1;Parent=gene-AL42_RS26840;Dbxref=GenBank:WP_003407240.1;Name=WP_003407240.1;gbkey=CDS;gene=mihF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010907783.1;locus_tag=AL42_RS26840;product=integration host factor%2C actinobacterial type;protein_id=WP_003407240.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1562167 1562793 . + . ID=gene-AL42_RS12790;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=AL42_RS12790;old_locus_tag=AL42_01446 NZ_KK316784.1 Protein Homology CDS 1562167 1562793 . + 0 ID=cds-WP_003900331.1;Parent=gene-AL42_RS12790;Dbxref=GenBank:WP_003900331.1;Name=WP_003900331.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=GMP kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215905.1;locus_tag=AL42_RS12790;product=guanylate kinase;protein_id=WP_003900331.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1562859 1563191 . + . ID=gene-AL42_RS12795;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=AL42_RS12795;old_locus_tag=AL42_01447 NZ_KK316784.1 Protein Homology CDS 1562859 1563191 . + 0 ID=cds-WP_003407248.1;Parent=gene-AL42_RS12795;Dbxref=GenBank:WP_003407248.1;Name=WP_003407248.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215906.1;locus_tag=AL42_RS12795;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_003407248.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1563207 1564463 . + . ID=gene-AL42_RS12800;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=AL42_RS12800;old_locus_tag=AL42_01448 NZ_KK316784.1 Protein Homology CDS 1563207 1564463 . + 0 ID=cds-WP_003898859.1;Parent=gene-AL42_RS12800;Dbxref=GenBank:WP_003898859.1;Name=WP_003898859.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215907.1;locus_tag=AL42_RS12800;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_003898859.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1564591 1565802 . + . ID=gene-AL42_RS12805;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=AL42_RS12805;old_locus_tag=AL42_01449 NZ_KK316784.1 Protein Homology CDS 1564591 1565802 . + 0 ID=cds-WP_003900333.1;Parent=gene-AL42_RS12805;Dbxref=GenBank:WP_003900333.1;Name=WP_003900333.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012393969.1;locus_tag=AL42_RS12805;product=methionine adenosyltransferase;protein_id=WP_003900333.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1565875 1567353 . - . ID=gene-AL42_RS12810;Name=AL42_RS12810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12810;old_locus_tag=AL42_01450 NZ_KK316784.1 Protein Homology CDS 1565875 1567353 . - 0 ID=cds-WP_003407257.1;Parent=gene-AL42_RS12810;Dbxref=GenBank:WP_003407257.1;Name=WP_003407257.1;Ontology_term=GO:0004497,GO:0016709,GO:0050660;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215909.1;locus_tag=AL42_RS12810;product=flavin-containing monooxygenase;protein_id=WP_003407257.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1567350 1568735 . - . ID=gene-AL42_RS12815;Name=AL42_RS12815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12815;old_locus_tag=AL42_01451 NZ_KK316784.1 Protein Homology CDS 1567350 1568735 . - 0 ID=cds-WP_003407260.1;Parent=gene-AL42_RS12815;Dbxref=GenBank:WP_003407260.1;Name=WP_003407260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177807.1;locus_tag=AL42_RS12815;product=cytochrome P450;protein_id=WP_003407260.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1568813 1569847 . + . ID=gene-AL42_RS12820;Name=AL42_RS12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12820;old_locus_tag=AL42_01452 NZ_KK316784.1 Protein Homology CDS 1568813 1569847 . + 0 ID=cds-WP_003407264.1;Parent=gene-AL42_RS12820;Dbxref=GenBank:WP_003407264.1;Name=WP_003407264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177808.1;locus_tag=AL42_RS12820;product=AraC family transcriptional regulator;protein_id=WP_003407264.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1569893 1571623 . - . ID=gene-AL42_RS12825;Name=AL42_RS12825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12825;old_locus_tag=AL42_01453 NZ_KK316784.1 Protein Homology CDS 1569893 1571623 . - 0 ID=cds-WP_009940170.1;Parent=gene-AL42_RS12825;Dbxref=GenBank:WP_009940170.1;Name=WP_009940170.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177809.1;locus_tag=AL42_RS12825;product=PE family protein;protein_id=WP_009940170.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1571878 1572279 . - . ID=gene-AL42_RS12830;Name=AL42_RS12830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12830;old_locus_tag=AL42_01454 NZ_KK316784.1 Protein Homology CDS 1571878 1572279 . - 0 ID=cds-WP_003898861.1;Parent=gene-AL42_RS12830;Dbxref=GenBank:WP_003898861.1;Name=WP_003898861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215913.1;locus_tag=AL42_RS12830;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003898861.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1572276 1572533 . - . ID=gene-AL42_RS12835;Name=AL42_RS12835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12835;old_locus_tag=AL42_01455 NZ_KK316784.1 Protein Homology CDS 1572276 1572533 . - 0 ID=cds-WP_003407272.1;Parent=gene-AL42_RS12835;Dbxref=GenBank:WP_003407272.1;Name=WP_003407272.1;Ontology_term=GO:0006276,GO:0006355,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_process=plasmid maintenance|0006276||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215914.1;locus_tag=AL42_RS12835;product=ribbon-helix-helix domain-containing protein;protein_id=WP_003407272.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1572616 1573575 . - . ID=gene-AL42_RS12840;Name=nlhH;gbkey=Gene;gene=nlhH;gene_biotype=protein_coding;locus_tag=AL42_RS12840;old_locus_tag=AL42_01456 NZ_KK316784.1 Protein Homology CDS 1572616 1573575 . - 0 ID=cds-WP_003407276.1;Parent=gene-AL42_RS12840;Dbxref=GenBank:WP_003407276.1;Name=WP_003407276.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nlhH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215915.1;locus_tag=AL42_RS12840;product=alpha/beta hydrolase;protein_id=WP_003407276.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1573600 1574562 . - . ID=gene-AL42_RS12845;Name=lipI;gbkey=Gene;gene=lipI;gene_biotype=protein_coding;locus_tag=AL42_RS12845;old_locus_tag=AL42_01457 NZ_KK316784.1 Protein Homology CDS 1573600 1574562 . - 0 ID=cds-WP_003905554.1;Parent=gene-AL42_RS12845;Dbxref=GenBank:WP_003905554.1;Name=WP_003905554.1;Ontology_term=GO:0016787;gbkey=CDS;gene=lipI;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215916.1;locus_tag=AL42_RS12845;product=alpha/beta hydrolase;protein_id=WP_003905554.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1574513 1575298 . + . ID=gene-AL42_RS12850;Name=AL42_RS12850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12850;old_locus_tag=AL42_01458 NZ_KK316784.1 Protein Homology CDS 1574513 1575298 . + 0 ID=cds-WP_003898862.1;Parent=gene-AL42_RS12850;Dbxref=GenBank:WP_003898862.1;Name=WP_003898862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898862.1;locus_tag=AL42_RS12850;product=lysoplasmalogenase;protein_id=WP_003898862.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1575379 1577346 . + . ID=gene-AL42_RS12855;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=AL42_RS12855;old_locus_tag=AL42_01459 NZ_KK316784.1 Protein Homology CDS 1575379 1577346 . + 0 ID=cds-WP_003407285.1;Parent=gene-AL42_RS12855;Dbxref=GenBank:WP_003407285.1;Name=WP_003407285.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013829229.1;locus_tag=AL42_RS12855;product=primosomal protein N';protein_id=WP_003407285.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1577364 1578188 . - . ID=gene-AL42_RS12860;Name=AL42_RS12860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12860;old_locus_tag=AL42_01460 NZ_KK316784.1 Protein Homology CDS 1577364 1578188 . - 0 ID=cds-WP_003407292.1;Parent=gene-AL42_RS12860;Dbxref=GenBank:WP_003407292.1;Name=WP_003407292.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215919.1;locus_tag=AL42_RS12860;product=class I SAM-dependent methyltransferase;protein_id=WP_003407292.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1578357 1578839 . + . ID=gene-AL42_RS12865;Name=AL42_RS12865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12865;old_locus_tag=AL42_01461 NZ_KK316784.1 Protein Homology CDS 1578357 1578839 . + 0 ID=cds-WP_003407295.1;Parent=gene-AL42_RS12865;Dbxref=GenBank:WP_003407295.1;Name=WP_003407295.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215920.1;locus_tag=AL42_RS12865;product=MarR family transcriptional regulator;protein_id=WP_003407295.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1578911 1579735 . - . ID=gene-AL42_RS12870;Name=AL42_RS12870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12870;old_locus_tag=AL42_01462 NZ_KK316784.1 Protein Homology CDS 1578911 1579735 . - 0 ID=cds-WP_003407297.1;Parent=gene-AL42_RS12870;Dbxref=GenBank:WP_003407297.1;Name=WP_003407297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215921.1;locus_tag=AL42_RS12870;product=virulence-associated methyltransferase;protein_id=WP_003407297.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1579932 1580870 . + . ID=gene-AL42_RS12875;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=AL42_RS12875;old_locus_tag=AL42_01463 NZ_KK316784.1 Protein Homology CDS 1579932 1580870 . + 0 ID=cds-WP_003900336.1;Parent=gene-AL42_RS12875;Dbxref=GenBank:WP_003900336.1;Name=WP_003900336.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215922.1;locus_tag=AL42_RS12875;product=methionyl-tRNA formyltransferase;protein_id=WP_003900336.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1580867 1582240 . + . ID=gene-AL42_RS12880;Name=fmu;gbkey=Gene;gene=fmu;gene_biotype=protein_coding;locus_tag=AL42_RS12880;old_locus_tag=AL42_01464 NZ_KK316784.1 Protein Homology CDS 1580867 1582240 . + 0 ID=cds-WP_003898865.1;Parent=gene-AL42_RS12880;Dbxref=GenBank:WP_003898865.1;Name=WP_003898865.1;gbkey=CDS;gene=fmu;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215923.1;locus_tag=AL42_RS12880;product=RsmB/NOP family class I SAM-dependent RNA methyltransferase;protein_id=WP_003898865.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1582265 1582963 . + . ID=gene-AL42_RS12885;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=AL42_RS12885;old_locus_tag=AL42_01465 NZ_KK316784.1 Protein Homology CDS 1582265 1582963 . + 0 ID=cds-WP_003901153.1;Parent=gene-AL42_RS12885;Dbxref=GenBank:WP_003901153.1;Name=WP_003901153.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215924.1;locus_tag=AL42_RS12885;product=ribulose-phosphate 3-epimerase;protein_id=WP_003901153.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1582960 1583979 . + . ID=gene-AL42_RS12890;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=AL42_RS12890;old_locus_tag=AL42_01466 NZ_KK316784.1 Protein Homology CDS 1582960 1583979 . + 0 ID=cds-WP_003898867.1;Parent=gene-AL42_RS12890;Dbxref=GenBank:WP_003898867.1;Name=WP_003898867.1;Ontology_term=GO:0008703,GO:0008835;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215925.1;locus_tag=AL42_RS12890;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_003898867.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1583976 1585532 . - . ID=gene-AL42_RS12895;Name=AL42_RS12895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12895;old_locus_tag=AL42_01467 NZ_KK316784.1 Protein Homology CDS 1583976 1585532 . - 0 ID=cds-WP_003407310.1;Parent=gene-AL42_RS12895;Dbxref=GenBank:WP_003407310.1;Name=WP_003407310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215926.1;locus_tag=AL42_RS12895;product=aminoglycoside/tetracycline transporter;protein_id=WP_003407310.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1585538 1586248 . - . ID=gene-AL42_RS12900;Name=lprG;gbkey=Gene;gene=lprG;gene_biotype=protein_coding;locus_tag=AL42_RS12900;old_locus_tag=AL42_01468 NZ_KK316784.1 Protein Homology CDS 1585538 1586248 . - 0 ID=cds-WP_003407315.1;Parent=gene-AL42_RS12900;Dbxref=GenBank:WP_003407315.1;Name=WP_003407315.1;gbkey=CDS;gene=lprG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215927.1;locus_tag=AL42_RS12900;product=lipoarabinomannan carrier protein LprG;protein_id=WP_003407315.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1586333 1586938 . + . ID=gene-AL42_RS12905;Name=ribC;gbkey=Gene;gene=ribC;gene_biotype=protein_coding;locus_tag=AL42_RS12905;old_locus_tag=AL42_01469 NZ_KK316784.1 Protein Homology CDS 1586333 1586938 . + 0 ID=cds-WP_003407318.1;Parent=gene-AL42_RS12905;Dbxref=GenBank:WP_003407318.1;Name=WP_003407318.1;gbkey=CDS;gene=ribC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215928.1;locus_tag=AL42_RS12905;product=riboflavin synthase;protein_id=WP_003407318.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1586965 1588058 . + . ID=gene-AL42_RS27165;Name=AL42_RS27165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS27165;pseudo=true NZ_KK316784.1 Protein Homology CDS 1586965 1588058 . + 0 ID=cds-AL42_RS27165;Parent=gene-AL42_RS27165;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015292928.1;locus_tag=AL42_RS27165;product=alanine racemase;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 1588163 1589440 . + . ID=gene-AL42_RS12920;Name=AL42_RS12920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12920;old_locus_tag=AL42_01472 NZ_KK316784.1 Protein Homology CDS 1588163 1589440 . + 0 ID=cds-WP_003407334.1;Parent=gene-AL42_RS12920;Dbxref=GenBank:WP_003407334.1;Name=WP_003407334.1;Ontology_term=GO:0003935,GO:0008686;gbkey=CDS;go_function=GTP cyclohydrolase II activity|0003935||IEA,3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215931.1;locus_tag=AL42_RS12920;product=bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II;protein_id=WP_003407334.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1589437 1589919 . + . ID=gene-AL42_RS12925;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=AL42_RS12925;old_locus_tag=AL42_01473 NZ_KK316784.1 Protein Homology CDS 1589437 1589919 . + 0 ID=cds-WP_003898872.1;Parent=gene-AL42_RS12925;Dbxref=GenBank:WP_003898872.1;Name=WP_003898872.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215932.2;locus_tag=AL42_RS12925;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_003898872.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1589916 1590380 . + . ID=gene-AL42_RS12930;Name=AL42_RS12930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12930;old_locus_tag=AL42_01474 NZ_KK316784.1 Protein Homology CDS 1589916 1590380 . + 0 ID=cds-WP_003407340.1;Parent=gene-AL42_RS12930;Dbxref=GenBank:WP_003407340.1;Name=WP_003407340.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215933.1;locus_tag=AL42_RS12930;product=PH domain-containing protein;protein_id=WP_003407340.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1590405 1591091 . + . ID=gene-AL42_RS12935;Name=AL42_RS12935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12935;old_locus_tag=AL42_01475 NZ_KK316784.1 Protein Homology CDS 1590405 1591091 . + 0 ID=cds-WP_003407343.1;Parent=gene-AL42_RS12935;Dbxref=GenBank:WP_003407343.1;Name=WP_003407343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215934.1;locus_tag=AL42_RS12935;product=hypothetical protein;protein_id=WP_003407343.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1591271 1591744 . + . ID=gene-AL42_RS12940;Name=AL42_RS12940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12940;old_locus_tag=AL42_01476 NZ_KK316784.1 Protein Homology CDS 1591271 1591744 . + 0 ID=cds-WP_003407345.1;Parent=gene-AL42_RS12940;Dbxref=GenBank:WP_003407345.1;Name=WP_003407345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215935.1;locus_tag=AL42_RS12940;product=lectin;protein_id=WP_003407345.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1591808 1593748 . + . ID=gene-AL42_RS12945;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=AL42_RS12945;old_locus_tag=AL42_01477 NZ_KK316784.1 Protein Homology CDS 1591808 1593748 . + 0 ID=cds-WP_003910831.1;Parent=gene-AL42_RS12945;Dbxref=GenBank:WP_003910831.1;Name=WP_003910831.1;Ontology_term=GO:0006289,GO:0003677,GO:0005515,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA,excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215936.1;locus_tag=AL42_RS12945;product=excinuclease ABC subunit UvrC;protein_id=WP_003910831.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1593745 1594650 . + . ID=gene-AL42_RS12950;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=AL42_RS12950;old_locus_tag=AL42_01478 NZ_KK316784.1 Protein Homology CDS 1593745 1594650 . + 0 ID=cds-WP_003898873.1;Parent=gene-AL42_RS12950;Dbxref=GenBank:WP_003898873.1;Name=WP_003898873.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215937.1;locus_tag=AL42_RS12950;product=RNase adapter RapZ;protein_id=WP_003898873.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1594647 1595675 . + . ID=gene-AL42_RS12955;Name=cuvA;gbkey=Gene;gene=cuvA;gene_biotype=protein_coding;locus_tag=AL42_RS12955;old_locus_tag=AL42_01479 NZ_KK316784.1 Protein Homology CDS 1594647 1595675 . + 0 ID=cds-WP_003407352.1;Parent=gene-AL42_RS12955;Dbxref=GenBank:WP_003407352.1;Name=WP_003407352.1;gbkey=CDS;gene=cuvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215938.1;locus_tag=AL42_RS12955;product=carbon utilization/virulence protein CuvA;protein_id=WP_003407352.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1595672 1596649 . + . ID=gene-AL42_RS12960;Name=whiA;gbkey=Gene;gene=whiA;gene_biotype=protein_coding;locus_tag=AL42_RS12960;old_locus_tag=AL42_01480 NZ_KK316784.1 Protein Homology CDS 1595672 1596649 . + 0 ID=cds-WP_003901156.1;Parent=gene-AL42_RS12960;Dbxref=GenBank:WP_003901156.1;Name=WP_003901156.1;Ontology_term=GO:0043937,GO:0003677;gbkey=CDS;gene=whiA;go_function=DNA binding|0003677||IEA;go_process=regulation of sporulation|0043937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215939.1;locus_tag=AL42_RS12960;product=DNA-binding protein WhiA;protein_id=WP_003901156.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1596659 1597420 . - . ID=gene-AL42_RS12965;Name=AL42_RS12965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12965;old_locus_tag=AL42_01481 NZ_KK316784.1 Protein Homology CDS 1596659 1597420 . - 0 ID=cds-WP_003407359.1;Parent=gene-AL42_RS12965;Dbxref=GenBank:WP_003407359.1;Name=WP_003407359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215940.1;locus_tag=AL42_RS12965;product=membrane protein;protein_id=WP_003407359.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1597424 1598803 . + . ID=gene-AL42_RS12970;Name=AL42_RS12970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12970;old_locus_tag=AL42_01482 NZ_KK316784.1 Protein Homology CDS 1597424 1598803 . + 0 ID=cds-WP_031721807.1;Parent=gene-AL42_RS12970;Dbxref=GenBank:WP_031721807.1;Name=WP_031721807.1;Ontology_term=GO:0045017,GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;go_process=glycerolipid biosynthetic process|0045017||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215941.1;locus_tag=AL42_RS12970;product=WS/DGAT/MGAT family O-acyltransferase;protein_id=WP_031721807.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1598825 1600087 . - . ID=gene-AL42_RS12975;Name=lipO;gbkey=Gene;gene=lipO;gene_biotype=protein_coding;locus_tag=AL42_RS12975;old_locus_tag=AL42_01483 NZ_KK316784.1 Protein Homology CDS 1598825 1600087 . - 0 ID=cds-WP_003407371.1;Parent=gene-AL42_RS12975;Dbxref=GenBank:WP_003407371.1;Name=WP_003407371.1;Ontology_term=GO:0016787;gbkey=CDS;gene=lipO;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215942.1;locus_tag=AL42_RS12975;product=alpha/beta hydrolase;protein_id=WP_003407371.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1600087 1601694 . - . ID=gene-AL42_RS12980;Name=fadD12;gbkey=Gene;gene=fadD12;gene_biotype=protein_coding;locus_tag=AL42_RS12980;old_locus_tag=AL42_01484 NZ_KK316784.1 Protein Homology CDS 1600087 1601694 . - 0 ID=cds-WP_003898876.1;Parent=gene-AL42_RS12980;Dbxref=GenBank:WP_003898876.1;Name=WP_003898876.1;gbkey=CDS;gene=fadD12;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215943.1;locus_tag=AL42_RS12980;product=acyl-CoA ligase FadD12;protein_id=WP_003898876.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1601698 1602525 . - . ID=gene-AL42_RS12985;Name=AL42_RS12985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12985;old_locus_tag=AL42_01485 NZ_KK316784.1 Protein Homology CDS 1601698 1602525 . - 0 ID=cds-WP_003407374.1;Parent=gene-AL42_RS12985;Dbxref=GenBank:WP_003407374.1;Name=WP_003407374.1;Ontology_term=GO:0006644,GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid metabolic process|0006644||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215944.1;locus_tag=AL42_RS12985;product=lysophospholipid acyltransferase family protein;protein_id=WP_003407374.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1602644 1603912 . + . ID=gene-AL42_RS12990;Name=AL42_RS12990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12990;old_locus_tag=AL42_01486 NZ_KK316784.1 Protein Homology CDS 1602644 1603912 . + 0 ID=cds-WP_003407376.1;Parent=gene-AL42_RS12990;Dbxref=GenBank:WP_003407376.1;Name=WP_003407376.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215945.1;locus_tag=AL42_RS12990;product=PucR family transcriptional regulator;protein_id=WP_003407376.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1604152 1605738 . + . ID=gene-AL42_RS12995;Name=AL42_RS12995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS12995;old_locus_tag=AL42_01487 NZ_KK316784.1 Protein Homology CDS 1604152 1605738 . + 0 ID=cds-WP_003407378.1;Parent=gene-AL42_RS12995;Dbxref=GenBank:WP_003407378.1;Name=WP_003407378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177810.1;locus_tag=AL42_RS12995;product=esterase PE16;protein_id=WP_003407378.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1605849 1607618 . + . ID=gene-AL42_RS13000;Name=AL42_RS13000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13000;old_locus_tag=AL42_01488 NZ_KK316784.1 Protein Homology CDS 1605849 1607618 . + 0 ID=cds-WP_003901159.1;Parent=gene-AL42_RS13000;Dbxref=GenBank:WP_003901159.1;Name=WP_003901159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215947.1;locus_tag=AL42_RS13000;product=DUF3556 domain-containing protein;protein_id=WP_003901159.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1607615 1609036 . + . ID=gene-AL42_RS13005;Name=AL42_RS13005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13005;old_locus_tag=AL42_01489 NZ_KK316784.1 Protein Homology CDS 1607615 1609036 . + 0 ID=cds-WP_003407382.1;Parent=gene-AL42_RS13005;Dbxref=GenBank:WP_003407382.1;Name=WP_003407382.1;Ontology_term=GO:0016116,GO:0016117,GO:0009055,GO:0016491;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA;go_process=carotenoid metabolic process|0016116||IEA,carotenoid biosynthetic process|0016117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215948.1;locus_tag=AL42_RS13005;product=phytoene desaturase family protein;protein_id=WP_003407382.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1609200 1610015 . + . ID=gene-AL42_RS13010;Name=ldtMt3;gbkey=Gene;gene=ldtMt3;gene_biotype=protein_coding;locus_tag=AL42_RS13010;old_locus_tag=AL42_01490 NZ_KK316784.1 Protein Homology CDS 1609200 1610015 . + 0 ID=cds-WP_003407384.1;Parent=gene-AL42_RS13010;Dbxref=GenBank:WP_003407384.1;Name=WP_003407384.1;gbkey=CDS;gene=ldtMt3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215949.1;locus_tag=AL42_RS13010;product=L%2CD-transpeptidase LdtMt3;protein_id=WP_003407384.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1610022 1610159 . + . ID=gene-AL42_RS13015;Name=AL42_RS13015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13015;old_locus_tag=AL42_01491 NZ_KK316784.1 Protein Homology CDS 1610022 1610159 . + 0 ID=cds-WP_003908693.1;Parent=gene-AL42_RS13015;Dbxref=GenBank:WP_003908693.1;Name=WP_003908693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215950.1;locus_tag=AL42_RS13015;product=hypothetical protein;protein_id=WP_003908693.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1610108 1610737 . - . ID=gene-AL42_RS13020;Name=AL42_RS13020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13020;old_locus_tag=AL42_01492 NZ_KK316784.1 Protein Homology CDS 1610108 1610737 . - 0 ID=cds-WP_003898878.1;Parent=gene-AL42_RS13020;Dbxref=GenBank:WP_003898878.1;Name=WP_003898878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215951.1;locus_tag=AL42_RS13020;product=hypothetical protein;protein_id=WP_003898878.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1611094 1612113 . + . ID=gene-AL42_RS13025;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=AL42_RS13025;old_locus_tag=AL42_01493 NZ_KK316784.1 Protein Homology CDS 1611094 1612113 . + 0 ID=cds-WP_003407390.1;Parent=gene-AL42_RS13025;Dbxref=GenBank:WP_003407390.1;Name=WP_003407390.1;Ontology_term=GO:0006006,GO:0016620,GO:0050661,GO:0051287;gbkey=CDS;gene=gap;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215952.1;locus_tag=AL42_RS13025;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_003407390.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1612116 1613354 . + . ID=gene-AL42_RS13030;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=AL42_RS13030;old_locus_tag=AL42_01494 NZ_KK316784.1 Protein Homology CDS 1612116 1613354 . + 0 ID=cds-WP_003900339.1;Parent=gene-AL42_RS13030;Dbxref=GenBank:WP_003900339.1;Name=WP_003900339.1;Ontology_term=GO:0006096,GO:0004618,GO:0005524,GO:0005737;gbkey=CDS;gene=pgk;go_component=cytoplasm|0005737||IEA;go_function=phosphoglycerate kinase activity|0004618||IEA,ATP binding|0005524||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215953.1;locus_tag=AL42_RS13030;product=phosphoglycerate kinase;protein_id=WP_003900339.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1613351 1614136 . + . ID=gene-AL42_RS13035;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=AL42_RS13035;old_locus_tag=AL42_01495 NZ_KK316784.1 Protein Homology CDS 1613351 1614136 . + 0 ID=cds-WP_003407398.1;Parent=gene-AL42_RS13035;Dbxref=GenBank:WP_003407398.1;Name=WP_003407398.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215954.1;locus_tag=AL42_RS13035;product=triose-phosphate isomerase;protein_id=WP_003407398.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1614152 1614379 . - . ID=gene-AL42_RS0104685;Name=AL42_RS0104685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0104685 NZ_KK316784.1 Protein Homology CDS 1614152 1614379 . - 0 ID=cds-WP_003407402.1;Parent=gene-AL42_RS0104685;Dbxref=GenBank:WP_003407402.1;Name=WP_003407402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003407402.1;locus_tag=AL42_RS0104685;product=hypothetical protein;protein_id=WP_003407402.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1614355 1614486 . - . ID=gene-AL42_RS27935;Name=AL42_RS27935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27935 NZ_KK316784.1 Protein Homology CDS 1614355 1614486 . - 0 ID=cds-WP_349875721.1;Parent=gene-AL42_RS27935;Dbxref=GenBank:WP_349875721.1;Name=WP_349875721.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF044451.3;locus_tag=AL42_RS27935;product=hypothetical protein;protein_id=WP_349875721.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1614570 1614740 . - . ID=gene-AL42_RS27940;Name=AL42_RS27940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS27940;partial=true;pseudo=true;start_range=.,1614570 NZ_KK316784.1 Protein Homology CDS 1614570 1614740 . - 0 ID=cds-AL42_RS27940;Parent=gene-AL42_RS27940;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF012655.6;locus_tag=AL42_RS27940;partial=true;product=TetR family transcriptional regulator;pseudo=true;start_range=.,1614570;transl_table=11 NZ_KK316784.1 RefSeq gene 1614748 1615173 . - . ID=gene-AL42_RS13040;Name=AL42_RS13040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13040;old_locus_tag=AL42_01496 NZ_KK316784.1 Protein Homology CDS 1614748 1615173 . - 0 ID=cds-WP_003902070.1;Parent=gene-AL42_RS13040;Dbxref=GenBank:WP_003902070.1;Name=WP_003902070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215955.1;locus_tag=AL42_RS13040;product=nuclear transport factor 2 family protein;protein_id=WP_003902070.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1615624 1615857 . + . ID=gene-AL42_RS13045;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=AL42_RS13045;old_locus_tag=AL42_01497 NZ_KK316784.1 Protein Homology CDS 1615624 1615857 . + 0 ID=cds-WP_003407407.1;Parent=gene-AL42_RS13045;Dbxref=GenBank:WP_003407407.1;Name=WP_003407407.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215956.2;locus_tag=AL42_RS13045;product=preprotein translocase subunit SecG;protein_id=WP_003407407.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1615996 1617453 . - . ID=gene-AL42_RS13050;Name=AL42_RS13050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13050;old_locus_tag=AL42_01498 NZ_KK316784.1 Protein Homology CDS 1615996 1617453 . - 0 ID=cds-WP_016810222.1;Parent=gene-AL42_RS13050;Dbxref=GenBank:WP_016810222.1;Name=WP_016810222.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177811.1;locus_tag=AL42_RS13050;product=PE family protein;protein_id=WP_016810222.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1617560 1619860 . + . ID=gene-AL42_RS13055;Name=bisC;gbkey=Gene;gene=bisC;gene_biotype=protein_coding;locus_tag=AL42_RS13055;old_locus_tag=AL42_01499 NZ_KK316784.1 Protein Homology CDS 1617560 1619860 . + 0 ID=cds-WP_003902073.1;Parent=gene-AL42_RS13055;Dbxref=GenBank:WP_003902073.1;Name=WP_003902073.1;gbkey=CDS;gene=bisC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215958.1;locus_tag=AL42_RS13055;product=molybdopterin guanine dinucleotide-containing S/N-oxide reductase;protein_id=WP_003902073.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1619976 1620440 . - . ID=gene-AL42_RS13060;Name=AL42_RS13060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13060;old_locus_tag=AL42_01500 NZ_KK316784.1 Protein Homology CDS 1619976 1620440 . - 0 ID=cds-WP_014584749.1;Parent=gene-AL42_RS13060;Dbxref=GenBank:WP_014584749.1;Name=WP_014584749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584749.1;locus_tag=AL42_RS13060;product=SRPBCC family protein;protein_id=WP_014584749.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1620537 1620776 . + . ID=gene-AL42_RS27945;Name=AL42_RS27945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27945 NZ_KK316784.1 Protein Homology CDS 1620537 1620776 . + 0 ID=cds-WP_003407426.1;Parent=gene-AL42_RS27945;Dbxref=GenBank:WP_003407426.1;Name=WP_003407426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015456255.1;locus_tag=AL42_RS27945;product=hypothetical protein;protein_id=WP_003407426.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1621056 1621466 . - . ID=gene-AL42_RS13065;Name=AL42_RS13065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13065;old_locus_tag=AL42_01501 NZ_KK316784.1 Protein Homology CDS 1621056 1621466 . - 0 ID=cds-WP_003898881.1;Parent=gene-AL42_RS13065;Dbxref=GenBank:WP_003898881.1;Name=WP_003898881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011739930.1;locus_tag=AL42_RS13065;product=hypothetical protein;protein_id=WP_003898881.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1621483 1622226 . - . ID=gene-AL42_RS13070;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;locus_tag=AL42_RS13070;old_locus_tag=AL42_01502 NZ_KK316784.1 Protein Homology CDS 1621483 1622226 . - 0 ID=cds-WP_003407433.1;Parent=gene-AL42_RS13070;Dbxref=GenBank:WP_003407433.1;Name=WP_003407433.1;Ontology_term=GO:0005975,GO:0006098,GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;go_process=carbohydrate metabolic process|0005975||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215961.1;locus_tag=AL42_RS13070;product=6-phosphogluconolactonase;protein_id=WP_003407433.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1622223 1623137 . - . ID=gene-AL42_RS13075;Name=opcA;gbkey=Gene;gene=opcA;gene_biotype=protein_coding;locus_tag=AL42_RS13075;old_locus_tag=AL42_01503 NZ_KK316784.1 Protein Homology CDS 1622223 1623137 . - 0 ID=cds-WP_003902074.1;Parent=gene-AL42_RS13075;Dbxref=GenBank:WP_003902074.1;Name=WP_003902074.1;Ontology_term=GO:0006098,GO:0065003;gbkey=CDS;gene=opcA;go_process=pentose-phosphate shunt|0006098||IEA,protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215962.1;locus_tag=AL42_RS13075;product=glucose-6-phosphate dehydrogenase assembly protein OpcA;protein_id=WP_003902074.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1623190 1624734 . - . ID=gene-AL42_RS13080;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=AL42_RS13080;old_locus_tag=AL42_01504 NZ_KK316784.1 Protein Homology CDS 1623190 1624734 . - 0 ID=cds-WP_003407443.1;Parent=gene-AL42_RS13080;Dbxref=GenBank:WP_003407443.1;Name=WP_003407443.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215963.1;locus_tag=AL42_RS13080;product=glucose-6-phosphate dehydrogenase;protein_id=WP_003407443.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1624731 1625852 . - . ID=gene-AL42_RS13085;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=AL42_RS13085;old_locus_tag=AL42_01505 NZ_KK316784.1 Protein Homology CDS 1624731 1625852 . - 0 ID=cds-WP_003407447.1;Parent=gene-AL42_RS13085;Dbxref=GenBank:WP_003407447.1;Name=WP_003407447.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215964.1;locus_tag=AL42_RS13085;product=transaldolase;protein_id=WP_003407447.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1625869 1627971 . - . ID=gene-AL42_RS13090;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=AL42_RS13090;old_locus_tag=AL42_01506 NZ_KK316784.1 Protein Homology CDS 1625869 1627971 . - 0 ID=cds-WP_003407451.1;Parent=gene-AL42_RS13090;Dbxref=GenBank:WP_003407451.1;Name=WP_003407451.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215965.1;locus_tag=AL42_RS13090;product=transketolase;protein_id=WP_003407451.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1628410 1631814 . - . ID=gene-AL42_RS0104710;Name=AL42_RS0104710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0104710;old_locus_tag=AL42_01507 NZ_KK316784.1 Protein Homology CDS 1628410 1631814 . - 0 ID=cds-WP_434738410.1;Parent=gene-AL42_RS0104710;Dbxref=GenBank:WP_434738410.1;Name=WP_434738410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014830018.1;locus_tag=AL42_RS0104710;product=PE family protein;protein_id=WP_434738410.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1632462 1633388 . + . ID=gene-AL42_RS13095;Name=ctaB;gbkey=Gene;gene=ctaB;gene_biotype=protein_coding;locus_tag=AL42_RS13095;old_locus_tag=AL42_01508 NZ_KK316784.1 Protein Homology CDS 1632462 1633388 . + 0 ID=cds-WP_003898882.1;Parent=gene-AL42_RS13095;Dbxref=GenBank:WP_003898882.1;Name=WP_003898882.1;Ontology_term=GO:0048034,GO:0008495,GO:0016020;gbkey=CDS;gene=ctaB;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215967.1;locus_tag=AL42_RS13095;product=heme o synthase;protein_id=WP_003898882.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1633437 1635740 . - . ID=gene-AL42_RS13100;Name=AL42_RS13100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13100;old_locus_tag=AL42_01509 NZ_KK316784.1 Protein Homology CDS 1633437 1635740 . - 0 ID=cds-WP_031648889.1;Parent=gene-AL42_RS13100;Dbxref=GenBank:WP_031648889.1;Name=WP_031648889.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177813.1;locus_tag=AL42_RS13100;product=PE family protein;protein_id=WP_031648889.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1635892 1637157 . + . ID=gene-AL42_RS13105;Name=AL42_RS13105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13105;old_locus_tag=AL42_01510 NZ_KK316784.1 Protein Homology CDS 1635892 1637157 . + 0 ID=cds-WP_003904629.1;Parent=gene-AL42_RS13105;Dbxref=GenBank:WP_003904629.1;Name=WP_003904629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215969.2;locus_tag=AL42_RS13105;product=Rv1453 family transcriptional regulator;protein_id=WP_003904629.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1637185 1638171 . - . ID=gene-AL42_RS13110;Name=qor;gbkey=Gene;gene=qor;gene_biotype=protein_coding;locus_tag=AL42_RS13110;old_locus_tag=AL42_01511 NZ_KK316784.1 Protein Homology CDS 1637185 1638171 . - 0 ID=cds-WP_003407462.1;Parent=gene-AL42_RS13110;Dbxref=GenBank:WP_003407462.1;Name=WP_003407462.1;Ontology_term=GO:0003960,GO:0070402;gbkey=CDS;gene=qor;go_function=NADPH:quinone reductase activity|0003960||IEA,NADPH binding|0070402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215970.1;locus_tag=AL42_RS13110;product=quinone oxidoreductase family protein;protein_id=WP_003407462.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1638191 1639054 . + . ID=gene-AL42_RS13115;Name=AL42_RS13115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13115;old_locus_tag=AL42_01512 NZ_KK316784.1 Protein Homology CDS 1638191 1639054 . + 0 ID=cds-WP_003900341.1;Parent=gene-AL42_RS13115;Dbxref=GenBank:WP_003900341.1;Name=WP_003900341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215971.1;locus_tag=AL42_RS13115;product=ATP-grasp domain-containing protein;protein_id=WP_003900341.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1639004 1639936 . - . ID=gene-AL42_RS13120;Name=AL42_RS13120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13120;old_locus_tag=AL42_01513 NZ_KK316784.1 Protein Homology CDS 1639004 1639936 . - 0 ID=cds-WP_003407466.1;Parent=gene-AL42_RS13120;Dbxref=GenBank:WP_003407466.1;Name=WP_003407466.1;Ontology_term=GO:0006783,GO:0017004,GO:0016491,GO:0020037,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=heme biosynthetic process|0006783||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215972.1;locus_tag=AL42_RS13120;product=COX15/CtaA family protein;protein_id=WP_003407466.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1640048 1640833 . - . ID=gene-AL42_RS13125;Name=AL42_RS13125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13125;old_locus_tag=AL42_01514 NZ_KK316784.1 Protein Homology CDS 1640048 1640833 . - 0 ID=cds-WP_003407475.1;Parent=gene-AL42_RS13125;Dbxref=GenBank:WP_003407475.1;Name=WP_003407475.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215973.1;locus_tag=AL42_RS13125;product=ABC transporter permease;protein_id=WP_003407475.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1640830 1641771 . - . ID=gene-AL42_RS13130;Name=AL42_RS13130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13130;old_locus_tag=AL42_01515 NZ_KK316784.1 Protein Homology CDS 1640830 1641771 . - 0 ID=cds-WP_003901170.1;Parent=gene-AL42_RS13130;Dbxref=GenBank:WP_003901170.1;Name=WP_003901170.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215974.1;locus_tag=AL42_RS13130;product=ABC transporter ATP-binding protein;protein_id=WP_003901170.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1641927 1643702 . - . ID=gene-AL42_RS13135;Name=mptB;gbkey=Gene;gene=mptB;gene_biotype=protein_coding;locus_tag=AL42_RS13135;old_locus_tag=AL42_01516 NZ_KK316784.1 Protein Homology CDS 1641927 1643702 . - 0 ID=cds-WP_003407479.1;Parent=gene-AL42_RS13135;Dbxref=GenBank:WP_003407479.1;Name=WP_003407479.1;gbkey=CDS;gene=mptB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215975.1;locus_tag=AL42_RS13135;product=polyprenol phosphomannose-dependent alpha 1%2C6 mannosyltransferase MptB;protein_id=WP_003407479.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1643750 1644556 . + . ID=gene-AL42_RS13140;Name=sufR;gbkey=Gene;gene=sufR;gene_biotype=protein_coding;locus_tag=AL42_RS13140;old_locus_tag=AL42_01517 NZ_KK316784.1 Protein Homology CDS 1643750 1644556 . + 0 ID=cds-WP_003902080.1;Parent=gene-AL42_RS13140;Dbxref=GenBank:WP_003902080.1;Name=WP_003902080.1;gbkey=CDS;gene=sufR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215976.2;locus_tag=AL42_RS13140;product=suf operon transcriptional regulator SufR;protein_id=WP_003902080.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1644553 1647093 . + . ID=gene-AL42_RS13145;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=AL42_RS13145;old_locus_tag=AL42_01518 NZ_KK316784.1 Protein Homology CDS 1644553 1647093 . + 0 ID=cds-WP_003902081.1;Parent=gene-AL42_RS13145;Dbxref=GenBank:WP_003902081.1;Name=WP_003902081.1;gbkey=CDS;gene=sufB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215977.1;locus_tag=AL42_RS13145;product=intein-containing Fe-S cluster assembly protein SufB;protein_id=WP_003902081.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1647090 1648283 . + . ID=gene-AL42_RS13150;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=AL42_RS13150;old_locus_tag=AL42_01519 NZ_KK316784.1 Protein Homology CDS 1647090 1648283 . + 0 ID=cds-WP_003407487.1;Parent=gene-AL42_RS13150;Dbxref=GenBank:WP_003407487.1;Name=WP_003407487.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215978.1;locus_tag=AL42_RS13150;product=Fe-S cluster assembly protein SufD;protein_id=WP_003407487.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1648280 1649080 . + . ID=gene-AL42_RS13155;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=AL42_RS13155;old_locus_tag=AL42_01520 NZ_KK316784.1 Protein Homology CDS 1648280 1649080 . + 0 ID=cds-WP_003902082.1;Parent=gene-AL42_RS13155;Dbxref=GenBank:WP_003902082.1;Name=WP_003902082.1;Ontology_term=GO:0016226,GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215979.1;locus_tag=AL42_RS13155;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_003902082.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1649082 1650335 . + . ID=gene-AL42_RS13160;Name=csd;gbkey=Gene;gene=csd;gene_biotype=protein_coding;locus_tag=AL42_RS13160;old_locus_tag=AL42_01521 NZ_KK316784.1 Protein Homology CDS 1649082 1650335 . + 0 ID=cds-WP_003407490.1;Parent=gene-AL42_RS13160;Dbxref=GenBank:WP_003407490.1;Name=WP_003407490.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;gene=csd;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215980.1;locus_tag=AL42_RS13160;product=cysteine desulfurase;protein_id=WP_003407490.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1650332 1650820 . + . ID=gene-AL42_RS13165;Name=sufU;gbkey=Gene;gene=sufU;gene_biotype=protein_coding;locus_tag=AL42_RS13165;old_locus_tag=AL42_01522 NZ_KK316784.1 Protein Homology CDS 1650332 1650820 . + 0 ID=cds-WP_003407491.1;Parent=gene-AL42_RS13165;Dbxref=GenBank:WP_003407491.1;Name=WP_003407491.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=sufU;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215981.1;locus_tag=AL42_RS13165;product=Fe-S cluster assembly sulfur transfer protein SufU;protein_id=WP_003407491.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1650795 1651142 . + . ID=gene-AL42_RS13170;Name=AL42_RS13170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13170;old_locus_tag=AL42_01523 NZ_KK316784.1 Protein Homology CDS 1650795 1651142 . + 0 ID=cds-WP_003407492.1;Parent=gene-AL42_RS13170;Dbxref=GenBank:WP_003407492.1;Name=WP_003407492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215982.1;locus_tag=AL42_RS13170;product=metal-sulfur cluster assembly factor;protein_id=WP_003407492.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1651237 1653066 . - . ID=gene-AL42_RS13175;Name=AL42_RS13175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13175;old_locus_tag=AL42_01524 NZ_KK316784.1 Protein Homology CDS 1651237 1653066 . - 0 ID=cds-WP_031721914.1;Parent=gene-AL42_RS13175;Dbxref=GenBank:WP_031721914.1;Name=WP_031721914.1;Ontology_term=GO:0006631,GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215983.1;locus_tag=AL42_RS13175;product=acyl-CoA dehydrogenase;protein_id=WP_031721914.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1653173 1654285 . - . ID=gene-AL42_RS13180;Name=AL42_RS13180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13180;old_locus_tag=AL42_01525 NZ_KK316784.1 Protein Homology CDS 1653173 1654285 . - 0 ID=cds-WP_003407494.1;Parent=gene-AL42_RS13180;Dbxref=GenBank:WP_003407494.1;Name=WP_003407494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177814.1;locus_tag=AL42_RS13180;product=PE-PGRS family ubiquitin-binding protein;protein_id=WP_003407494.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1654622 1655883 . - . ID=gene-AL42_RS13185;Name=AL42_RS13185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13185;old_locus_tag=AL42_01526 NZ_KK316784.1 Protein Homology CDS 1655595 1655883 . - 0 ID=cds-WP_087902221.1-3;Parent=gene-AL42_RS13185;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL42_RS13185;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316784.1 Protein Homology CDS 1654622 1655595 . - 2 ID=cds-WP_087902221.1-3;Parent=gene-AL42_RS13185;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL42_RS13185;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1655882 1657858 . + . ID=gene-AL42_RS13195;Name=ctpD;gbkey=Gene;gene=ctpD;gene_biotype=protein_coding;locus_tag=AL42_RS13195;old_locus_tag=AL42_01528 NZ_KK316784.1 Protein Homology CDS 1655882 1657858 . + 0 ID=cds-WP_003905583.1;Parent=gene-AL42_RS13195;Dbxref=GenBank:WP_003905583.1;Name=WP_003905583.1;gbkey=CDS;gene=ctpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215985.1;locus_tag=AL42_RS13195;product=cobalt-translocating P-type ATPase CtpD;protein_id=WP_003905583.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1657902 1658276 . + . ID=gene-AL42_RS13200;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=AL42_RS13200;old_locus_tag=AL42_01529 NZ_KK316784.1 Protein Homology CDS 1657902 1658276 . + 0 ID=cds-WP_003900345.1;Parent=gene-AL42_RS13200;Dbxref=GenBank:WP_003900345.1;Name=WP_003900345.1;Ontology_term=GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215986.1;locus_tag=AL42_RS13200;product=thioredoxin family protein;protein_id=WP_003900345.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1658292 1658663 . + . ID=gene-AL42_RS13205;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=AL42_RS13205;old_locus_tag=AL42_01530 NZ_KK316784.1 Protein Homology CDS 1658292 1658663 . + 0 ID=cds-WP_003407501.1;Parent=gene-AL42_RS13205;Dbxref=GenBank:WP_003407501.1;Name=WP_003407501.1;Ontology_term=GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177815.1;locus_tag=AL42_RS13205;product=thioredoxin;protein_id=WP_003407501.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1658685 1659542 . + . ID=gene-AL42_RS13210;Name=AL42_RS13210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13210;old_locus_tag=AL42_01531 NZ_KK316784.1 Protein Homology CDS 1658685 1659542 . + 0 ID=cds-WP_003898888.1;Parent=gene-AL42_RS13210;Dbxref=GenBank:WP_003898888.1;Name=WP_003898888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215988.1;locus_tag=AL42_RS13210;product=enoyl-CoA hydratase;protein_id=WP_003898888.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1659578 1661206 . + . ID=gene-AL42_RS13215;Name=AL42_RS13215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13215;old_locus_tag=AL42_01532 NZ_KK316784.1 Protein Homology CDS 1659578 1661206 . + 0 ID=cds-WP_003407507.1;Parent=gene-AL42_RS13215;Dbxref=GenBank:WP_003407507.1;Name=WP_003407507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215989.1;locus_tag=AL42_RS13215;product=macrolide ABC transporter ATP-binding protein;protein_id=WP_003407507.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1661303 1661494 . + . ID=gene-AL42_RS13220;Name=AL42_RS13220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13220;old_locus_tag=AL42_01533 NZ_KK316784.1 Protein Homology CDS 1661303 1661494 . + 0 ID=cds-WP_003407511.1;Parent=gene-AL42_RS13220;Dbxref=GenBank:WP_003407511.1;Name=WP_003407511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177644.1;locus_tag=AL42_RS13220;product=helix-turn-helix domain-containing protein;protein_id=WP_003407511.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1661563 1662126 . - . ID=gene-AL42_RS13225;Name=AL42_RS13225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13225;old_locus_tag=AL42_01534 NZ_KK316784.1 Protein Homology CDS 1661563 1662126 . - 0 ID=cds-WP_003407514.1;Parent=gene-AL42_RS13225;Dbxref=GenBank:WP_003407514.1;Name=WP_003407514.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215990.1;locus_tag=AL42_RS13225;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003407514.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1662137 1664968 . - . ID=gene-AL42_RS13230;Name=acn;gbkey=Gene;gene=acn;gene_biotype=protein_coding;locus_tag=AL42_RS13230;old_locus_tag=AL42_01535 NZ_KK316784.1 Protein Homology CDS 1662137 1664968 . - 0 ID=cds-WP_003898889.1;Parent=gene-AL42_RS13230;Dbxref=GenBank:WP_003898889.1;Name=WP_003898889.1;gbkey=CDS;gene=acn;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215991.1;locus_tag=AL42_RS13230;product=iron-regulated aconitate hydratase Acn;protein_id=WP_003898889.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1665126 1665686 . + . ID=gene-AL42_RS13235;Name=AL42_RS13235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13235;old_locus_tag=AL42_01536 NZ_KK316784.1 Protein Homology CDS 1665126 1665686 . + 0 ID=cds-WP_003407520.1;Parent=gene-AL42_RS13235;Dbxref=GenBank:WP_003407520.1;Name=WP_003407520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215992.1;locus_tag=AL42_RS13235;product=Rv1476 family membrane protein;protein_id=WP_003407520.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1665912 1667330 . + . ID=gene-AL42_RS13240;Name=ripA;gbkey=Gene;gene=ripA;gene_biotype=protein_coding;locus_tag=AL42_RS13240;old_locus_tag=AL42_01537 NZ_KK316784.1 Protein Homology CDS 1665912 1667330 . + 0 ID=cds-WP_003407523.1;Parent=gene-AL42_RS13240;Dbxref=GenBank:WP_003407523.1;Name=WP_003407523.1;gbkey=CDS;gene=ripA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215993.1;locus_tag=AL42_RS13240;product=NlpC/P60 family peptidoglycan endopeptidase RipA;protein_id=WP_003407523.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1667341 1668066 . + . ID=gene-AL42_RS13245;Name=ripB;gbkey=Gene;gene=ripB;gene_biotype=protein_coding;locus_tag=AL42_RS13245;old_locus_tag=AL42_01538 NZ_KK316784.1 Protein Homology CDS 1667341 1668066 . + 0 ID=cds-WP_003407525.1;Parent=gene-AL42_RS13245;Dbxref=GenBank:WP_003407525.1;Name=WP_003407525.1;gbkey=CDS;gene=ripB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215994.1;locus_tag=AL42_RS13245;product=NlpC/P60 family peptidoglycan endopeptidase RipB;protein_id=WP_003407525.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1668205 1669338 . + . ID=gene-AL42_RS13250;Name=moxR1;gbkey=Gene;gene=moxR1;gene_biotype=protein_coding;locus_tag=AL42_RS13250;old_locus_tag=AL42_01539 NZ_KK316784.1 Protein Homology CDS 1668205 1669338 . + 0 ID=cds-WP_003407527.1;Parent=gene-AL42_RS13250;Dbxref=GenBank:WP_003407527.1;Name=WP_003407527.1;gbkey=CDS;gene=moxR1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177816.1;locus_tag=AL42_RS13250;product=chaperone MoxR1;protein_id=WP_003407527.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1669335 1670288 . + . ID=gene-AL42_RS13255;Name=AL42_RS13255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13255;old_locus_tag=AL42_01540 NZ_KK316784.1 Protein Homology CDS 1669335 1670288 . + 0 ID=cds-WP_003407529.1;Parent=gene-AL42_RS13255;Dbxref=GenBank:WP_003407529.1;Name=WP_003407529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215996.1;locus_tag=AL42_RS13255;product=DUF58 domain-containing protein;protein_id=WP_003407529.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1670299 1671306 . + . ID=gene-AL42_RS13260;Name=AL42_RS13260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13260;old_locus_tag=AL42_01541 NZ_KK316784.1 Protein Homology CDS 1670299 1671306 . + 0 ID=cds-WP_003407530.1;Parent=gene-AL42_RS13260;Dbxref=GenBank:WP_003407530.1;Name=WP_003407530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215997.1;locus_tag=AL42_RS13260;product=VWA domain-containing protein;protein_id=WP_003407530.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1671379 1672221 . - . ID=gene-AL42_RS13265;Name=AL42_RS13265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13265;old_locus_tag=AL42_01542 NZ_KK316784.1 Protein Homology CDS 1671379 1672221 . - 0 ID=cds-WP_003407537.1;Parent=gene-AL42_RS13265;Dbxref=GenBank:WP_003407537.1;Name=WP_003407537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215998.2;locus_tag=AL42_RS13265;product=hypothetical protein;protein_id=WP_003407537.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1672362 1673105 . + . ID=gene-AL42_RS13270;Name=fabG1;gbkey=Gene;gene=fabG1;gene_biotype=protein_coding;gene_synonym=mabA;locus_tag=AL42_RS13270;old_locus_tag=AL42_01543 NZ_KK316784.1 Protein Homology CDS 1672362 1673105 . + 0 ID=cds-WP_003898892.1;Parent=gene-AL42_RS13270;Dbxref=GenBank:WP_003898892.1;Name=WP_003898892.1;gbkey=CDS;gene=fabG1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215999.1;locus_tag=AL42_RS13270;product=3-oxoacyl-ACP reductase FabG1;protein_id=WP_003898892.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1673124 1673933 . + . ID=gene-AL42_RS13275;Name=inhA;gbkey=Gene;gene=inhA;gene_biotype=protein_coding;locus_tag=AL42_RS13275;old_locus_tag=AL42_01544 NZ_KK316784.1 Protein Homology CDS 1673124 1673933 . + 0 ID=cds-WP_003407553.1;Parent=gene-AL42_RS13275;Dbxref=GenBank:WP_003407553.1;Name=WP_003407553.1;Ontology_term=GO:0071768;gbkey=CDS;gene=inhA;go_process=mycolic acid biosynthetic process|0071768||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216000.1;locus_tag=AL42_RS13275;product=NADH-dependent enoyl-ACP reductase InhA;protein_id=WP_003407553.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1673939 1674973 . + . ID=gene-AL42_RS13280;Name=hemZ;gbkey=Gene;gene=hemZ;gene_biotype=protein_coding;locus_tag=AL42_RS13280;old_locus_tag=AL42_01545 NZ_KK316784.1 Protein Homology CDS 1673939 1674973 . + 0 ID=cds-WP_003407559.1;Parent=gene-AL42_RS13280;Dbxref=GenBank:WP_003407559.1;Name=WP_003407559.1;Ontology_term=GO:0006783,GO:0004325;gbkey=CDS;gene=hemZ;go_function=ferrochelatase activity|0004325||IEA;go_process=heme biosynthetic process|0006783||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216001.1;locus_tag=AL42_RS13280;product=ferrochelatase;protein_id=WP_003407559.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1674939 1675805 . - . ID=gene-AL42_RS13285;Name=AL42_RS13285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13285;old_locus_tag=AL42_01546 NZ_KK316784.1 Protein Homology CDS 1674939 1675805 . - 0 ID=cds-WP_003902086.1;Parent=gene-AL42_RS13285;Dbxref=GenBank:WP_003902086.1;Name=WP_003902086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216002.2;locus_tag=AL42_RS13285;product=hypothetical protein;protein_id=WP_003902086.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1675863 1676297 . + . ID=gene-AL42_RS13290;Name=AL42_RS13290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13290;old_locus_tag=AL42_01547 NZ_KK316784.1 Protein Homology CDS 1675863 1676297 . + 0 ID=cds-WP_003407562.1;Parent=gene-AL42_RS13290;Dbxref=GenBank:WP_003407562.1;Name=WP_003407562.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216003.1;locus_tag=AL42_RS13290;product=NfeD family protein;protein_id=WP_003407562.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1676319 1677464 . + . ID=gene-AL42_RS13295;Name=AL42_RS13295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13295;old_locus_tag=AL42_01548 NZ_KK316784.1 Protein Homology CDS 1676319 1677464 . + 0 ID=cds-WP_003407571.1;Parent=gene-AL42_RS13295;Dbxref=GenBank:WP_003407571.1;Name=WP_003407571.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216004.1;locus_tag=AL42_RS13295;product=SPFH domain-containing protein;protein_id=WP_003407571.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1677474 1677830 . + . ID=gene-AL42_RS13300;Name=AL42_RS13300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13300;old_locus_tag=AL42_01549 NZ_KK316784.1 Protein Homology CDS 1677474 1677830 . + 0 ID=cds-WP_003902087.1;Parent=gene-AL42_RS13300;Dbxref=GenBank:WP_003902087.1;Name=WP_003902087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177645.1;locus_tag=AL42_RS13300;product=DoxX family protein;protein_id=WP_003902087.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1677876 1678055 . + . ID=gene-AL42_RS13305;Name=AL42_RS13305;end_range=1678055,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS13305;old_locus_tag=AL42_01550;partial=true;pseudo=true;start_range=.,1677876 NZ_KK316784.1 Protein Homology CDS 1677876 1678055 . + 0 ID=cds-AL42_RS13305;Parent=gene-AL42_RS13305;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1678055,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003903477.1;locus_tag=AL42_RS13305;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1677876;transl_table=11 NZ_KK316784.1 RefSeq gene 1678244 1679551 . + . ID=gene-AL42_RS13310;Name=AL42_RS13310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13310;old_locus_tag=AL42_01551 NZ_KK316784.1 Protein Homology CDS 1678244 1679551 . + 0 ID=cds-WP_003898896.1;Parent=gene-AL42_RS13310;Dbxref=GenBank:WP_003898896.1;Name=WP_003898896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216006.1;locus_tag=AL42_RS13310;product=membrane protein;protein_id=WP_003898896.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1679592 1679783 . + . ID=gene-AL42_RS28125;Name=AL42_RS28125;end_range=1679783,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS28125;partial=true;pseudo=true;start_range=.,1679592 NZ_KK316784.1 Protein Homology CDS 1679592 1679783 . + 0 ID=cds-AL42_RS28125;Parent=gene-AL42_RS28125;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1679783,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015289458.1;locus_tag=AL42_RS28125;partial=true;product=transposase;pseudo=true;start_range=.,1679592;transl_table=11 NZ_KK316784.1 RefSeq gene 1680130 1680888 . - . ID=gene-AL42_RS13315;Name=AL42_RS13315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13315;old_locus_tag=AL42_01552 NZ_KK316784.1 Protein Homology CDS 1680130 1680888 . - 0 ID=cds-WP_003407583.1;Parent=gene-AL42_RS13315;Dbxref=GenBank:WP_003407583.1;Name=WP_003407583.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216007.1;locus_tag=AL42_RS13315;product=TVP38/TMEM64 family protein;protein_id=WP_003407583.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1681079 1682926 . + . ID=gene-AL42_RS13320;Name=mutA;gbkey=Gene;gene=mutA;gene_biotype=protein_coding;locus_tag=AL42_RS13320;old_locus_tag=AL42_01553 NZ_KK316784.1 Protein Homology CDS 1681079 1682926 . + 0 ID=cds-WP_003407585.1;Parent=gene-AL42_RS13320;Dbxref=GenBank:WP_003407585.1;Name=WP_003407585.1;Ontology_term=GO:0019652,GO:0004494;gbkey=CDS;gene=mutA;go_function=methylmalonyl-CoA mutase activity|0004494||IEA;go_process=lactate fermentation to propionate and acetate|0019652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216008.1;locus_tag=AL42_RS13320;product=methylmalonyl-CoA mutase small subunit;protein_id=WP_003407585.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1682927 1685179 . + . ID=gene-AL42_RS13325;Name=scpA;gbkey=Gene;gene=scpA;gene_biotype=protein_coding;locus_tag=AL42_RS13325;old_locus_tag=AL42_01554 NZ_KK316784.1 Protein Homology CDS 1682927 1685179 . + 0 ID=cds-WP_003407587.1;Parent=gene-AL42_RS13325;Dbxref=GenBank:WP_003407587.1;Name=WP_003407587.1;Ontology_term=GO:0004494,GO:0031419,GO:0046872;gbkey=CDS;gene=scpA;go_function=methylmalonyl-CoA mutase activity|0004494||IEA,cobalamin binding|0031419||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216009.1;locus_tag=AL42_RS13325;product=methylmalonyl-CoA mutase;protein_id=WP_003407587.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1685193 1685495 . + . ID=gene-AL42_RS13330;Name=mazE4;gbkey=Gene;gene=mazE4;gene_biotype=protein_coding;locus_tag=AL42_RS13330;old_locus_tag=AL42_01555 NZ_KK316784.1 Protein Homology CDS 1685193 1685495 . + 0 ID=cds-WP_003900349.1;Parent=gene-AL42_RS13330;Dbxref=GenBank:WP_003900349.1;Name=WP_003900349.1;gbkey=CDS;gene=mazE4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216010.1;locus_tag=AL42_RS13330;product=type II toxin-antitoxin system antitoxin MazE4;protein_id=WP_003900349.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1685492 1685809 . + . ID=gene-AL42_RS13335;Name=mazF4;gbkey=Gene;gene=mazF4;gene_biotype=protein_coding;gene_synonym=mazF-mt7;locus_tag=AL42_RS13335;old_locus_tag=AL42_01556 NZ_KK316784.1 Protein Homology CDS 1685492 1685809 . + 0 ID=cds-WP_003407593.1;Parent=gene-AL42_RS13335;Dbxref=GenBank:WP_003407593.1;Name=WP_003407593.1;gbkey=CDS;gene=mazF4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216011.1;locus_tag=AL42_RS13335;product=type II toxin-antitoxin system toxin endoribonuclease MazF4;protein_id=WP_003407593.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1685806 1686810 . + . ID=gene-AL42_RS13340;Name=meaB;gbkey=Gene;gene=meaB;gene_biotype=protein_coding;locus_tag=AL42_RS13340;old_locus_tag=AL42_01557 NZ_KK316784.1 Protein Homology CDS 1685806 1686810 . + 0 ID=cds-WP_003407596.1;Parent=gene-AL42_RS13340;Dbxref=GenBank:WP_003407596.1;Name=WP_003407596.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=meaB;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216012.1;locus_tag=AL42_RS13340;product=methylmalonyl Co-A mutase-associated GTPase MeaB;protein_id=WP_003407596.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1686863 1688152 . + . ID=gene-AL42_RS13345;Name=lipL;gbkey=Gene;gene=lipL;gene_biotype=protein_coding;locus_tag=AL42_RS13345;old_locus_tag=AL42_01558 NZ_KK316784.1 Protein Homology CDS 1686863 1688152 . + 0 ID=cds-WP_003902090.1;Parent=gene-AL42_RS13345;Dbxref=GenBank:WP_003902090.1;Name=WP_003902090.1;Ontology_term=GO:0016787;gbkey=CDS;gene=lipL;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216013.1;locus_tag=AL42_RS13345;product=esterase/beta-lactamase LipL;protein_id=WP_003902090.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1688225 1689001 . - . ID=gene-AL42_RS13350;Name=AL42_RS13350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13350;old_locus_tag=AL42_01559 NZ_KK316784.1 Protein Homology CDS 1688225 1689001 . - 0 ID=cds-WP_305953045.1;Parent=gene-AL42_RS13350;Dbxref=GenBank:WP_305953045.1;Name=WP_305953045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898898.1;locus_tag=AL42_RS13350;product=class I SAM-dependent methyltransferase;protein_id=WP_305953045.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1689056 1689268 . - . ID=gene-AL42_RS13355;Name=AL42_RS13355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13355;old_locus_tag=AL42_01560 NZ_KK316784.1 Protein Homology CDS 1689056 1689268 . - 0 ID=cds-WP_003898900.1;Parent=gene-AL42_RS13355;Dbxref=GenBank:WP_003898900.1;Name=WP_003898900.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177647.1;locus_tag=AL42_RS13355;product=dodecin;protein_id=WP_003898900.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1689278 1689580 . - . ID=gene-AL42_RS27955;Name=AL42_RS27955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27955 NZ_KK316784.1 Protein Homology CDS 1689278 1689580 . - 0 ID=cds-WP_003407610.1;Parent=gene-AL42_RS27955;Dbxref=GenBank:WP_003407610.1;Name=WP_003407610.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF012514.6;locus_tag=AL42_RS27955;product=NUDIX domain-containing protein;protein_id=WP_003407610.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1689772 1690800 . + . ID=gene-AL42_RS13365;Name=losA;gbkey=Gene;gene=losA;gene_biotype=protein_coding;gene_synonym=pimF;locus_tag=AL42_RS13365;old_locus_tag=AL42_01562 NZ_KK316784.1 Protein Homology CDS 1689772 1690800 . + 0 ID=cds-WP_003407612.1;Parent=gene-AL42_RS13365;Dbxref=GenBank:WP_003407612.1;Name=WP_003407612.1;gbkey=CDS;gene=losA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216016.1;locus_tag=AL42_RS13365;product=glycosyltransferase LosA;protein_id=WP_003407612.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1690812 1691626 . + . ID=gene-AL42_RS0104715;Name=AL42_RS0104715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS0104715;old_locus_tag=AL42_01563;pseudo=true NZ_KK316784.1 Protein Homology CDS 1690812 1691626 . + 0 ID=cds-AL42_RS0104715;Parent=gene-AL42_RS0104715;Note=frameshifted;Ontology_term=GO:0046872,GO:0051213;gbkey=CDS;go_function=metal ion binding|0046872||IEA,dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216017.1;locus_tag=AL42_RS0104715;product=phytanoyl-CoA dioxygenase family protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 1691839 1692738 . + . ID=gene-AL42_RS13370;Name=AL42_RS13370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13370;old_locus_tag=AL42_01564 NZ_KK316784.1 Protein Homology CDS 1691839 1692738 . + 0 ID=cds-WP_003407616.1;Parent=gene-AL42_RS13370;Dbxref=GenBank:WP_003407616.1;Name=WP_003407616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216018.1;locus_tag=AL42_RS13370;product=glycoside hydrolase family protein;protein_id=WP_003407616.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1692911 1694059 . - . ID=gene-AL42_RS25805;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=pseudogene;gene_synonym=fcnA,wecE;locus_tag=AL42_RS25805;old_locus_tag=AL42_01565;pseudo=true NZ_KK316784.1 Protein Homology CDS 1692911 1694059 . - 0 ID=cds-AL42_RS25805;Parent=gene-AL42_RS25805;Note=internal stop;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010950550.1;locus_tag=AL42_RS25805;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 1694196 1694861 . - . ID=gene-AL42_RS13375;Name=AL42_RS13375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13375;old_locus_tag=AL42_01566 NZ_KK316784.1 Protein Homology CDS 1694196 1694861 . - 0 ID=cds-WP_003901181.1;Parent=gene-AL42_RS13375;Dbxref=GenBank:WP_003901181.1;Name=WP_003901181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216021.1;locus_tag=AL42_RS13375;product=acetyltransferase;protein_id=WP_003901181.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1694858 1695376 . - . ID=gene-AL42_RS13380;Name=AL42_RS13380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13380;old_locus_tag=AL42_01567 NZ_KK316784.1 Protein Homology CDS 1694858 1695376 . - 0 ID=cds-WP_003898904.1;Parent=gene-AL42_RS13380;Dbxref=GenBank:WP_003898904.1;Name=WP_003898904.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: protein motif:HMM:NF019847.6;locus_tag=AL42_RS13380;product=class I SAM-dependent methyltransferase;protein_id=WP_003898904.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1695641 1696336 . - . ID=gene-AL42_RS13385;Name=AL42_RS13385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13385;old_locus_tag=AL42_01568 NZ_KK316784.1 Protein Homology CDS 1695641 1696336 . - 0 ID=cds-WP_003407623.1;Parent=gene-AL42_RS13385;Dbxref=GenBank:WP_003407623.1;Name=WP_003407623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216023.1;locus_tag=AL42_RS13385;product=WbqC family protein;protein_id=WP_003407623.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1696270 1696773 . + . ID=gene-AL42_RS13390;Name=AL42_RS13390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13390;old_locus_tag=AL42_01569 NZ_KK316784.1 Protein Homology CDS 1696270 1696773 . + 0 ID=cds-WP_003900353.1;Parent=gene-AL42_RS13390;Dbxref=GenBank:WP_003900353.1;Name=WP_003900353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177648.1;locus_tag=AL42_RS13390;product=hypothetical protein;protein_id=WP_003900353.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1697009 1698808 . - . ID=gene-AL42_RS13395;Name=AL42_RS13395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13395;old_locus_tag=AL42_01570 NZ_KK316784.1 Protein Homology CDS 1697009 1698808 . - 0 ID=cds-WP_003902092.1;Parent=gene-AL42_RS13395;Dbxref=GenBank:WP_003902092.1;Name=WP_003902092.1;Ontology_term=GO:0016758;gbkey=CDS;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216024.1;locus_tag=AL42_RS13395;product=glycosyltransferase 87 family protein;protein_id=WP_003902092.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1698873 1698992 . + . ID=gene-AL42_RS27595;Name=AL42_RS27595;end_range=1698992,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS27595;partial=true;pseudo=true;start_range=.,1698873 NZ_KK316784.1 Protein Homology CDS 1698873 1698992 . + 0 ID=cds-AL42_RS27595;Parent=gene-AL42_RS27595;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1698992,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216027.1;locus_tag=AL42_RS27595;partial=true;product=GDP-mannose 4%2C6-dehydratase;pseudo=true;start_range=.,1698873;transl_table=11 NZ_KK316784.1 RefSeq gene 1699126 1700007 . + . ID=gene-AL42_RS13405;Name=AL42_RS13405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13405;old_locus_tag=AL42_01572 NZ_KK316784.1 Protein Homology CDS 1699126 1700007 . + 0 ID=cds-WP_003407632.1;Parent=gene-AL42_RS13405;Dbxref=GenBank:WP_003407632.1;Name=WP_003407632.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216025.1;locus_tag=AL42_RS13405;product=class I SAM-dependent methyltransferase;protein_id=WP_003407632.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1700209 1701507 . + . ID=gene-AL42_RS13410;Name=AL42_RS13410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13410;old_locus_tag=AL42_01573 NZ_KK316784.1 Protein Homology CDS 1700209 1701507 . + 0 ID=cds-WP_003901183.1;Parent=gene-AL42_RS13410;Dbxref=GenBank:WP_003901183.1;Name=WP_003901183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216026.1;locus_tag=AL42_RS13410;product=hypothetical protein;protein_id=WP_003901183.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1701988 1703010 . + . ID=gene-AL42_RS13415;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=AL42_RS13415;old_locus_tag=AL42_01574 NZ_KK316784.1 Protein Homology CDS 1701988 1703010 . + 0 ID=cds-WP_003407639.1;Parent=gene-AL42_RS13415;Dbxref=GenBank:WP_003407639.1;Name=WP_003407639.1;Ontology_term=GO:0000271,GO:0019673,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,GDP-mannose metabolic process|0019673||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216027.1;locus_tag=AL42_RS13415;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_003407639.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1703007 1703975 . + . ID=gene-AL42_RS13420;Name=epiA;gbkey=Gene;gene=epiA;gene_biotype=protein_coding;locus_tag=AL42_RS13420;old_locus_tag=AL42_01575 NZ_KK316784.1 Protein Homology CDS 1703007 1703975 . + 0 ID=cds-WP_003407642.1;Parent=gene-AL42_RS13420;Dbxref=GenBank:WP_003407642.1;Name=WP_003407642.1;Ontology_term=GO:0016491;gbkey=CDS;gene=epiA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216028.1;locus_tag=AL42_RS13420;product=GDP-L-fucose synthase family protein;protein_id=WP_003407642.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1703972 1704703 . + . ID=gene-AL42_RS13425;Name=AL42_RS13425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13425;old_locus_tag=AL42_01576 NZ_KK316784.1 Protein Homology CDS 1703972 1704703 . + 0 ID=cds-WP_003407647.1;Parent=gene-AL42_RS13425;Dbxref=GenBank:WP_003407647.1;Name=WP_003407647.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216029.1;locus_tag=AL42_RS13425;product=FkbM family methyltransferase;protein_id=WP_003407647.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1704721 1705509 . - . ID=gene-AL42_RS13430;Name=AL42_RS13430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13430;old_locus_tag=AL42_01577 NZ_KK316784.1 Protein Homology CDS 1704721 1705509 . - 0 ID=cds-WP_003407650.1;Parent=gene-AL42_RS13430;Dbxref=GenBank:WP_003407650.1;Name=WP_003407650.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216030.1;locus_tag=AL42_RS13430;product=glycosyltransferase family 2 protein;protein_id=WP_003407650.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1705544 1706440 . - . ID=gene-AL42_RS13435;Name=AL42_RS13435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13435;old_locus_tag=AL42_01578 NZ_KK316784.1 Protein Homology CDS 1705544 1706440 . - 0 ID=cds-WP_003905587.1;Parent=gene-AL42_RS13435;Dbxref=GenBank:WP_003905587.1;Name=WP_003905587.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216031.1;locus_tag=AL42_RS13435;product=class I SAM-dependent methyltransferase;protein_id=WP_003905587.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1706443 1707453 . - . ID=gene-AL42_RS13440;Name=AL42_RS13440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13440;old_locus_tag=AL42_01579 NZ_KK316784.1 Protein Homology CDS 1706443 1707453 . - 0 ID=cds-WP_003900357.1;Parent=gene-AL42_RS13440;Dbxref=GenBank:WP_003900357.1;Name=WP_003900357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216032.2;locus_tag=AL42_RS13440;product=glycosyltransferase;protein_id=WP_003900357.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1707785 1708549 . + . ID=gene-AL42_RS13445;Name=AL42_RS13445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13445;old_locus_tag=AL42_01580 NZ_KK316784.1 Protein Homology CDS 1707785 1708549 . + 0 ID=cds-WP_003407654.1;Parent=gene-AL42_RS13445;Dbxref=GenBank:WP_003407654.1;Name=WP_003407654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216033.1;locus_tag=AL42_RS13445;product=GAP family protein;protein_id=WP_003407654.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1708558 1709517 . + . ID=gene-AL42_RS13450;Name=AL42_RS13450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13450;old_locus_tag=AL42_01581 NZ_KK316784.1 Protein Homology CDS 1708558 1709517 . + 0 ID=cds-WP_003407655.1;Parent=gene-AL42_RS13450;Dbxref=GenBank:WP_003407655.1;Name=WP_003407655.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216034.1;locus_tag=AL42_RS13450;product=glycosyltransferase family 2 protein;protein_id=WP_003407655.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1709764 1709916 . + . ID=gene-AL42_RS27175;Name=AL42_RS27175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS27175;partial=true;pseudo=true;start_range=.,1709764 NZ_KK316784.1 Protein Homology CDS 1709764 1709916 . + 0 ID=cds-AL42_RS27175;Parent=gene-AL42_RS27175;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217919.1;locus_tag=AL42_RS27175;partial=true;product=DegT/DnrJ/EryC1/StrS family aminotransferase;pseudo=true;start_range=.,1709764;transl_table=11 NZ_KK316784.1 RefSeq gene 1709942 1710982 . + . ID=gene-AL42_RS13460;Name=AL42_RS13460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13460;old_locus_tag=AL42_01583 NZ_KK316784.1 Protein Homology CDS 1709942 1710982 . + 0 ID=cds-WP_003901186.1;Parent=gene-AL42_RS13460;Dbxref=GenBank:WP_003901186.1;Name=WP_003901186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216036.3;locus_tag=AL42_RS13460;product=glycosyltransferase;protein_id=WP_003901186.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1711216 1712967 . + . ID=gene-AL42_RS13465;Name=fadD25;gbkey=Gene;gene=fadD25;gene_biotype=protein_coding;gene_synonym=faaL25;locus_tag=AL42_RS13465;old_locus_tag=AL42_01584 NZ_KK316784.1 Protein Homology CDS 1711216 1712967 . + 0 ID=cds-WP_003901187.1;Parent=gene-AL42_RS13465;Dbxref=GenBank:WP_003901187.1;Name=WP_003901187.1;gbkey=CDS;gene=fadD25;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216037.1;locus_tag=AL42_RS13465;product=fatty-acid--AMP ligase FAAL25/FadD25;protein_id=WP_003901187.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1713086 1716526 . - . ID=gene-AL42_RS13470;Name=mmpL12;gbkey=Gene;gene=mmpL12;gene_biotype=protein_coding;locus_tag=AL42_RS13470;old_locus_tag=AL42_01585 NZ_KK316784.1 Protein Homology CDS 1713086 1716526 . - 0 ID=cds-WP_003901188.1;Parent=gene-AL42_RS13470;Dbxref=GenBank:WP_003901188.1;Name=WP_003901188.1;gbkey=CDS;gene=mmpL12;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216038.1;locus_tag=AL42_RS13470;product=RND transporter MmpL12;protein_id=WP_003901188.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1716567 1717610 . + . ID=gene-AL42_RS13475;Name=AL42_RS13475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13475;old_locus_tag=AL42_01586 NZ_KK316784.1 Protein Homology CDS 1716567 1717610 . + 0 ID=cds-WP_003407670.1;Parent=gene-AL42_RS13475;Dbxref=GenBank:WP_003407670.1;Name=WP_003407670.1;Ontology_term=GO:0071770,GO:0008757;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=DIM/DIP cell wall layer assembly|0071770||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216039.1;locus_tag=AL42_RS13475;product=phthiotriol/phenolphthiotriol dimycocerosates methyltransferase;protein_id=WP_003407670.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1717640 1718884 . + . ID=gene-AL42_RS13480;Name=AL42_RS13480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13480;old_locus_tag=AL42_01587 NZ_KK316784.1 Protein Homology CDS 1717640 1718884 . + 0 ID=cds-WP_003407671.1;Parent=gene-AL42_RS13480;Dbxref=GenBank:WP_003407671.1;Name=WP_003407671.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216040.1;locus_tag=AL42_RS13480;product=glycosyltransferase;protein_id=WP_003407671.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1718931 1719716 . + . ID=gene-AL42_RS13485;Name=AL42_RS13485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13485;old_locus_tag=AL42_01588 NZ_KK316784.1 Protein Homology CDS 1718931 1719716 . + 0 ID=cds-WP_003407672.1;Parent=gene-AL42_RS13485;Dbxref=GenBank:WP_003407672.1;Name=WP_003407672.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216041.1;locus_tag=AL42_RS13485;product=glycosyltransferase family 2 protein;protein_id=WP_003407672.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1719694 1720974 . - . ID=gene-AL42_RS13490;Name=AL42_RS13490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13490;old_locus_tag=AL42_01589 NZ_KK316784.1 Protein Homology CDS 1719694 1720974 . - 0 ID=cds-WP_003407676.1;Parent=gene-AL42_RS13490;Dbxref=GenBank:WP_003407676.1;Name=WP_003407676.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216042.1;locus_tag=AL42_RS13490;product=glycosyltransferase;protein_id=WP_003407676.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1720997 1727323 . - . ID=gene-AL42_RS13495;Name=pks2;gbkey=Gene;gene=pks2;gene_biotype=protein_coding;locus_tag=AL42_RS13495;old_locus_tag=AL42_01590 NZ_KK316784.1 Protein Homology CDS 1720997 1727323 . - 0 ID=cds-WP_003901190.1;Parent=gene-AL42_RS13495;Dbxref=GenBank:WP_003901190.1;Name=WP_003901190.1;gbkey=CDS;gene=pks2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216043.1;locus_tag=AL42_RS13495;product=sulfolipid-1 biosynthesis phthioceranic/hydroxyphthioceranic acid synthase;protein_id=WP_003901190.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1727867 1728364 . - . ID=gene-AL42_RS13500;Name=AL42_RS13500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13500;old_locus_tag=AL42_01591 NZ_KK316784.1 Protein Homology CDS 1727867 1728364 . - 0 ID=cds-WP_003898919.1;Parent=gene-AL42_RS13500;Dbxref=GenBank:WP_003898919.1;Name=WP_003898919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216044.1;locus_tag=AL42_RS13500;product=polyketide synthase;protein_id=WP_003898919.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1728416 1730170 . + . ID=gene-AL42_RS13505;Name=fadD24;gbkey=Gene;gene=fadD24;gene_biotype=protein_coding;gene_synonym=faaL24;locus_tag=AL42_RS13505;old_locus_tag=AL42_01592 NZ_KK316784.1 Protein Homology CDS 1728416 1730170 . + 0 ID=cds-WP_031721915.1;Parent=gene-AL42_RS13505;Dbxref=GenBank:WP_031721915.1;Name=WP_031721915.1;gbkey=CDS;gene=fadD24;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216045.1;locus_tag=AL42_RS13505;product=fatty-acid--AMP ligase FAAL24/FadD24;protein_id=WP_031721915.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1730287 1731390 . + . ID=gene-AL42_RS13510;Name=adh;gbkey=Gene;gene=adh;gene_biotype=protein_coding;locus_tag=AL42_RS13510;old_locus_tag=AL42_01593 NZ_KK316784.1 Protein Homology CDS 1730287 1731390 . + 0 ID=cds-WP_003407690.1;Parent=gene-AL42_RS13510;Dbxref=GenBank:WP_003407690.1;Name=WP_003407690.1;Ontology_term=GO:0008270,GO:0016616,GO:0030554;gbkey=CDS;gene=adh;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216046.1;locus_tag=AL42_RS13510;product=zinc-dependent alcohol dehydrogenase;protein_id=WP_003407690.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1731387 1731953 . + . ID=gene-AL42_RS13515;Name=AL42_RS13515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13515;old_locus_tag=AL42_01594 NZ_KK316784.1 Protein Homology CDS 1731387 1731953 . + 0 ID=cds-WP_003407692.1;Parent=gene-AL42_RS13515;Dbxref=GenBank:WP_003407692.1;Name=WP_003407692.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216047.1;locus_tag=AL42_RS13515;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_003407692.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1732030 1732464 . - . ID=gene-AL42_RS13520;Name=AL42_RS13520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13520;old_locus_tag=AL42_01595 NZ_KK316784.1 Protein Homology CDS 1732030 1732464 . - 0 ID=cds-WP_003905590.1;Parent=gene-AL42_RS13520;Dbxref=GenBank:WP_003905590.1;Name=WP_003905590.1;Ontology_term=GO:0016790,GO:0016836,GO:0047617;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA,hydro-lyase activity|0016836||IEA,fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216048.1;locus_tag=AL42_RS13520;product=PaaI family thioesterase;protein_id=WP_003905590.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1732524 1733651 . + . ID=gene-AL42_RS13525;Name=AL42_RS13525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13525;old_locus_tag=AL42_01596 NZ_KK316784.1 Protein Homology CDS 1732524 1733651 . + 0 ID=cds-WP_003898921.1;Parent=gene-AL42_RS13525;Dbxref=GenBank:WP_003898921.1;Name=WP_003898921.1;Ontology_term=GO:0004497,GO:0010181,GO:0016703;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,FMN binding|0010181||IEA,oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)|0016703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216049.1;locus_tag=AL42_RS13525;product=NAD(P)H-dependent flavin oxidoreductase;protein_id=WP_003898921.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1733648 1734325 . + . ID=gene-AL42_RS13530;Name=AL42_RS13530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13530;old_locus_tag=AL42_01597 NZ_KK316784.1 Protein Homology CDS 1733648 1734325 . + 0 ID=cds-WP_003407700.1;Parent=gene-AL42_RS13530;Dbxref=GenBank:WP_003407700.1;Name=WP_003407700.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216050.1;locus_tag=AL42_RS13530;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003407700.1;transl_table=11 NZ_KK316784.1 cmsearch riboswitch 1734423 1734592 . + . ID=id-NZ_KK316784.1:1734423..1734592;Dbxref=RFAM:RF00380;Note=The M-box (ykoK) riboswitch appears to function as a genetic 'off' switch that is important for maintaining magnesium homeostasis in bacteria;bound_moiety=magnesium;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_KK316784.1 RefSeq gene 1734890 1735126 . + . ID=gene-AL42_RS13535;Name=AL42_RS13535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13535;old_locus_tag=AL42_01598 NZ_KK316784.1 Protein Homology CDS 1734890 1735126 . + 0 ID=cds-WP_003407710.1;Parent=gene-AL42_RS13535;Dbxref=GenBank:WP_003407710.1;Name=WP_003407710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216051.1;locus_tag=AL42_RS13535;product=Rv1535 family protein;protein_id=WP_003407710.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1735433 1738558 . + . ID=gene-AL42_RS13540;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=AL42_RS13540;old_locus_tag=AL42_01599 NZ_KK316784.1 Protein Homology CDS 1735433 1738558 . + 0 ID=cds-WP_003407714.1;Parent=gene-AL42_RS13540;Dbxref=GenBank:WP_003407714.1;Name=WP_003407714.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216052.1;locus_tag=AL42_RS13540;product=isoleucine--tRNA ligase;protein_id=WP_003407714.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1738770 1740161 . + . ID=gene-AL42_RS13545;Name=dinX;gbkey=Gene;gene=dinX;gene_biotype=protein_coding;locus_tag=AL42_RS13545;old_locus_tag=AL42_01600 NZ_KK316784.1 Protein Homology CDS 1738770 1740161 . + 0 ID=cds-WP_003904641.1;Parent=gene-AL42_RS13545;Dbxref=GenBank:WP_003904641.1;Name=WP_003904641.1;Ontology_term=GO:0006260,GO:0003887;gbkey=CDS;gene=dinX;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216053.3;locus_tag=AL42_RS13545;product=DNA polymerase IV;protein_id=WP_003904641.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1740126 1741106 . - . ID=gene-AL42_RS13550;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=AL42_RS13550;old_locus_tag=AL42_01601 NZ_KK316784.1 Protein Homology CDS 1740126 1741106 . - 0 ID=cds-WP_003905591.1;Parent=gene-AL42_RS13550;Dbxref=GenBank:WP_003905591.1;Name=WP_003905591.1;gbkey=CDS;gene=ansA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216054.1;locus_tag=AL42_RS13550;product=asparaginase;protein_id=WP_003905591.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1741158 1741766 . + . ID=gene-AL42_RS13555;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=AL42_RS13555;old_locus_tag=AL42_01602 NZ_KK316784.1 Protein Homology CDS 1741158 1741766 . + 0 ID=cds-WP_003407722.1;Parent=gene-AL42_RS13555;Dbxref=GenBank:WP_003407722.1;Name=WP_003407722.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216055.1;locus_tag=AL42_RS13555;product=signal peptidase II;protein_id=WP_003407722.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1741759 1742685 . + . ID=gene-AL42_RS13560;Name=AL42_RS13560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13560;old_locus_tag=AL42_01603 NZ_KK316784.1 Protein Homology CDS 1741759 1742685 . + 0 ID=cds-WP_003407723.1;Parent=gene-AL42_RS13560;Dbxref=GenBank:WP_003407723.1;Name=WP_003407723.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216056.1;locus_tag=AL42_RS13560;product=RluA family pseudouridine synthase;protein_id=WP_003407723.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1742692 1743285 . - . ID=gene-AL42_RS13565;Name=lprI;gbkey=Gene;gene=lprI;gene_biotype=protein_coding;locus_tag=AL42_RS13565;old_locus_tag=AL42_01604 NZ_KK316784.1 Protein Homology CDS 1742692 1743285 . - 0 ID=cds-WP_003407725.1;Parent=gene-AL42_RS13565;Dbxref=GenBank:WP_003407725.1;Name=WP_003407725.1;gbkey=CDS;gene=lprI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216057.1;locus_tag=AL42_RS13565;product=lysozyme inhibitor LprI family protein;protein_id=WP_003407725.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1743340 1743750 . - . ID=gene-AL42_RS13570;Name=glbN;gbkey=Gene;gene=glbN;gene_biotype=protein_coding;locus_tag=AL42_RS13570;old_locus_tag=AL42_01605 NZ_KK316784.1 Protein Homology CDS 1743340 1743750 . - 0 ID=cds-WP_003407730.1;Parent=gene-AL42_RS13570;Dbxref=GenBank:WP_003407730.1;Name=WP_003407730.1;gbkey=CDS;gene=glbN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216058.1;locus_tag=AL42_RS13570;product=group 1 truncated hemoglobin GlbN;protein_id=WP_003407730.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1743978 1745003 . + . ID=gene-AL42_RS13575;Name=AL42_RS13575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13575;old_locus_tag=AL42_01606 NZ_KK316784.1 Protein Homology CDS 1743978 1745003 . + 0 ID=cds-WP_003407734.1;Parent=gene-AL42_RS13575;Dbxref=GenBank:WP_003407734.1;Name=WP_003407734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216059.1;locus_tag=AL42_RS13575;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_003407734.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1745008 1745811 . + . ID=gene-AL42_RS13580;Name=AL42_RS13580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13580;old_locus_tag=AL42_01607 NZ_KK316784.1 Protein Homology CDS 1745008 1745811 . + 0 ID=cds-WP_003407737.1;Parent=gene-AL42_RS13580;Dbxref=GenBank:WP_003407737.1;Name=WP_003407737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216060.1;locus_tag=AL42_RS13580;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_003407737.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1745833 1746060 . + . ID=gene-AL42_RS13585;Name=AL42_RS13585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13585;old_locus_tag=AL42_01608 NZ_KK316784.1 Protein Homology CDS 1745833 1746060 . + 0 ID=cds-WP_003901194.1;Parent=gene-AL42_RS13585;Dbxref=GenBank:WP_003901194.1;Name=WP_003901194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216061.1;locus_tag=AL42_RS13585;product=hypothetical protein;protein_id=WP_003901194.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1746109 1746540 . + . ID=gene-AL42_RS13590;Name=AL42_RS13590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13590;old_locus_tag=AL42_01609 NZ_KK316784.1 Protein Homology CDS 1746109 1746540 . + 0 ID=cds-WP_003407748.1;Parent=gene-AL42_RS13590;Dbxref=GenBank:WP_003407748.1;Name=WP_003407748.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216062.1;locus_tag=AL42_RS13590;product=type II toxin-antitoxin system Rv0910 family toxin;protein_id=WP_003407748.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1746608 1750162 . + . ID=gene-AL42_RS13595;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=AL42_RS13595;old_locus_tag=AL42_01610 NZ_KK316784.1 Protein Homology CDS 1746608 1750162 . + 0 ID=cds-WP_003407751.1;Parent=gene-AL42_RS13595;Dbxref=GenBank:WP_003407751.1;Name=WP_003407751.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216063.1;locus_tag=AL42_RS13595;product=DNA polymerase III subunit alpha;protein_id=WP_003407751.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1750211 1752247 . - . ID=gene-AL42_RS13600;Name=AL42_RS13600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13600;old_locus_tag=AL42_01611 NZ_KK316784.1 Protein Homology CDS 1750211 1752247 . - 0 ID=cds-WP_003903497.1;Parent=gene-AL42_RS13600;Dbxref=GenBank:WP_003903497.1;Name=WP_003903497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177817.1;locus_tag=AL42_RS13600;product=PPE family protein;protein_id=WP_003903497.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1752521 1754346 . + . ID=gene-AL42_RS13605;Name=fadD11;gbkey=Gene;gene=fadD11;gene_biotype=pseudogene;locus_tag=AL42_RS13605;old_locus_tag=AL42_01613;pseudo=true NZ_KK316784.1 Protein Homology CDS 1752521 1754346 . + 0 ID=cds-AL42_RS13605;Parent=gene-AL42_RS13605;Note=frameshifted;gbkey=CDS;gene=fadD11;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014380383.1;locus_tag=AL42_RS13605;product=fatty acid--CoA ligase FadD11;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1754636 1756224 . + . ID=gene-AL42_RS0104730;Name=AL42_RS0104730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS0104730;pseudo=true NZ_KK316784.1 Protein Homology CDS 1754636 1756224 . + 0 ID=cds-AL42_RS0104730;Parent=gene-AL42_RS0104730;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039580.5;locus_tag=AL42_RS0104730;product=lysophospholipid acyltransferase;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 1756352 1756585 . + . ID=gene-AL42_RS0104735;Name=AL42_RS0104735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0104735 NZ_KK316784.1 Protein Homology CDS 1756352 1756585 . + 0 ID=cds-WP_003407763.1;Parent=gene-AL42_RS0104735;Dbxref=GenBank:WP_003407763.1;Name=WP_003407763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003407763.1;locus_tag=AL42_RS0104735;product=hypothetical protein;protein_id=WP_003407763.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1756595 1758346 . + . ID=gene-AL42_RS13610;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=AL42_RS13610;old_locus_tag=AL42_01615 NZ_KK316784.1 Protein Homology CDS 1756595 1758346 . + 0 ID=cds-WP_003898925.1;Parent=gene-AL42_RS13610;Dbxref=GenBank:WP_003898925.1;Name=WP_003898925.1;Ontology_term=GO:0009061,GO:0000104;gbkey=CDS;gene=frdA;go_function=succinate dehydrogenase activity|0000104||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216068.1;locus_tag=AL42_RS13610;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=WP_003898925.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1758349 1759086 . + . ID=gene-AL42_RS0104740;Name=sdhB;end_range=1759086,.;gbkey=Gene;gene=sdhB;gene_biotype=pseudogene;locus_tag=AL42_RS0104740;old_locus_tag=AL42_01616;partial=true;pseudo=true NZ_KK316784.1 Protein Homology CDS 1758349 1759086 . + 0 ID=cds-AL42_RS0104740;Parent=gene-AL42_RS0104740;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1759086,.;gbkey=CDS;gene=sdhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216069.1;locus_tag=AL42_RS0104740;partial=true;product=succinate dehydrogenase iron-sulfur subunit;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 1759090 1759470 . + . ID=gene-AL42_RS27600;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=AL42_RS27600;old_locus_tag=AL42_01617 NZ_KK316784.1 Protein Homology CDS 1759090 1759470 . + 0 ID=cds-WP_003407768.1;Parent=gene-AL42_RS27600;Dbxref=GenBank:WP_003407768.1;Name=WP_003407768.1;gbkey=CDS;gene=frdC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216070.1;locus_tag=AL42_RS27600;product=fumarate reductase subunit C;protein_id=WP_003407768.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1759467 1759844 . + . ID=gene-AL42_RS13620;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=AL42_RS13620;old_locus_tag=AL42_01618 NZ_KK316784.1 Protein Homology CDS 1759467 1759844 . + 0 ID=cds-WP_003407771.1;Parent=gene-AL42_RS13620;Dbxref=GenBank:WP_003407771.1;Name=WP_003407771.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216071.1;locus_tag=AL42_RS13620;product=fumarate reductase subunit FrdD;protein_id=WP_003407771.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1759912 1760520 . + . ID=gene-AL42_RS13625;Name=AL42_RS13625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13625;old_locus_tag=AL42_01619 NZ_KK316784.1 Protein Homology CDS 1759912 1760520 . + 0 ID=cds-WP_003407773.1;Parent=gene-AL42_RS13625;Dbxref=GenBank:WP_003407773.1;Name=WP_003407773.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216072.1;locus_tag=AL42_RS13625;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003407773.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1760707 1761852 . + . ID=gene-AL42_RS13630;Name=AL42_RS13630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS13630;old_locus_tag=AL42_01620;partial=true;pseudo=true;start_range=.,1760707 NZ_KK316784.1 Protein Homology CDS 1760707 1761852 . + 0 ID=cds-AL42_RS13630;Parent=gene-AL42_RS13630;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015293038.1;locus_tag=AL42_RS13630;partial=true;product=MMPL family transporter;pseudo=true;start_range=.,1760707;transl_table=11 NZ_KK316784.1 RefSeq gene 1761862 1762308 . + . ID=gene-AL42_RS13635;Name=AL42_RS13635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13635;old_locus_tag=AL42_01621 NZ_KK316784.1 Protein Homology CDS 1761862 1762308 . + 0 ID=cds-WP_003407780.1;Parent=gene-AL42_RS13635;Dbxref=GenBank:WP_003407780.1;Name=WP_003407780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216074.1;locus_tag=AL42_RS13635;product=F420H(2)-dependent quinone reductase;protein_id=WP_003407780.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1762343 1763632 . + . ID=gene-AL42_RS13640;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=AL42_RS13640;old_locus_tag=AL42_01622 NZ_KK316784.1 Protein Homology CDS 1762343 1763632 . + 0 ID=cds-WP_003407781.1;Parent=gene-AL42_RS13640;Dbxref=GenBank:WP_003407781.1;Name=WP_003407781.1;Ontology_term=GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216075.1;locus_tag=AL42_RS13640;product=threonine ammonia-lyase;protein_id=WP_003407781.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1763685 1763888 . + . ID=gene-AL42_RS13645;Name=AL42_RS13645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13645;old_locus_tag=AL42_01623 NZ_KK316784.1 Protein Homology CDS 1763685 1763888 . + 0 ID=cds-WP_009935474.1;Parent=gene-AL42_RS13645;Dbxref=GenBank:WP_009935474.1;Name=WP_009935474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009935474.1;locus_tag=AL42_RS13645;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_009935474.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1763894 1764298 . + . ID=gene-AL42_RS13650;Name=vapc11;gbkey=Gene;gene=vapc11;gene_biotype=protein_coding;locus_tag=AL42_RS13650;old_locus_tag=AL42_01624 NZ_KK316784.1 Protein Homology CDS 1763894 1764298 . + 0 ID=cds-WP_003407786.1;Parent=gene-AL42_RS13650;Dbxref=GenBank:WP_003407786.1;Name=WP_003407786.1;gbkey=CDS;gene=vapc11;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216077.1;locus_tag=AL42_RS13650;product=type II toxin-antitoxin system toxin ribonuclease VapC11;protein_id=WP_003407786.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1764315 1766057 . - . ID=gene-AL42_RS13655;Name=treZ;gbkey=Gene;gene=treZ;gene_biotype=protein_coding;locus_tag=AL42_RS13655;old_locus_tag=AL42_01625 NZ_KK316784.1 Protein Homology CDS 1764315 1766057 . - 0 ID=cds-WP_003407788.1;Parent=gene-AL42_RS13655;Dbxref=GenBank:WP_003407788.1;Name=WP_003407788.1;Ontology_term=GO:0005992,GO:0033942;gbkey=CDS;gene=treZ;go_function=4-alpha-D-(1->4)-alpha-D-glucanotrehalose trehalohydrolase activity|0033942||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177819.1;locus_tag=AL42_RS13655;product=malto-oligosyltrehalose trehalohydrolase;protein_id=WP_003407788.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1766050 1768347 . - . ID=gene-AL42_RS13660;Name=treY;gbkey=Gene;gene=treY;gene_biotype=protein_coding;locus_tag=AL42_RS13660;old_locus_tag=AL42_01626 NZ_KK316784.1 Protein Homology CDS 1766050 1768347 . - 0 ID=cds-WP_003407790.1;Parent=gene-AL42_RS13660;Dbxref=GenBank:WP_003407790.1;Name=WP_003407790.1;Ontology_term=GO:0005992,GO:0047470;gbkey=CDS;gene=treY;go_function=(1%2C4)-alpha-D-glucan 1-alpha-D-glucosylmutase activity|0047470||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177820.1;locus_tag=AL42_RS13660;product=malto-oligosyltrehalose synthase;protein_id=WP_003407790.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1768351 1770516 . - . ID=gene-AL42_RS13665;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=AL42_RS13665;old_locus_tag=AL42_01627 NZ_KK316784.1 Protein Homology CDS 1768351 1770516 . - 0 ID=cds-WP_003898930.1;Parent=gene-AL42_RS13665;Dbxref=GenBank:WP_003898930.1;Name=WP_003898930.1;Ontology_term=GO:0005980,GO:0120549;gbkey=CDS;gene=glgX;go_function=limit dextrin alpha-1%2C6-maltotetraose-hydrolase activity|0120549||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177821.1;locus_tag=AL42_RS13665;product=glycogen debranching protein GlgX;protein_id=WP_003898930.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1770555 1772744 . - . ID=gene-AL42_RS13670;Name=AL42_RS13670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13670;old_locus_tag=AL42_01628 NZ_KK316784.1 Protein Homology CDS 1770555 1772744 . - 0 ID=cds-WP_003407794.1;Parent=gene-AL42_RS13670;Dbxref=GenBank:WP_003407794.1;Name=WP_003407794.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216081.1;locus_tag=AL42_RS13670;product=acyltransferase family protein;protein_id=WP_003407794.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1772843 1773535 . - . ID=gene-AL42_RS13675;Name=ripD;gbkey=Gene;gene=ripD;gene_biotype=protein_coding;locus_tag=AL42_RS13675;old_locus_tag=AL42_01629 NZ_KK316784.1 Protein Homology CDS 1772843 1773535 . - 0 ID=cds-WP_003407798.1;Parent=gene-AL42_RS13675;Dbxref=GenBank:WP_003407798.1;Name=WP_003407798.1;gbkey=CDS;gene=ripD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216082.1;locus_tag=AL42_RS13675;product=NlpC/P60 family peptidoglycan-binding protein RipD;protein_id=WP_003407798.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1773775 1774224 . - . ID=gene-AL42_RS27180;Name=AL42_RS27180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27180 NZ_KK316784.1 Protein Homology CDS 1773775 1774224 . - 0 ID=cds-WP_003911567.1;Parent=gene-AL42_RS27180;Dbxref=GenBank:WP_003911567.1;Name=WP_003911567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020424437.1;locus_tag=AL42_RS27180;product=hypothetical protein;protein_id=WP_003911567.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1774307 1775620 . + . ID=gene-AL42_RS13680;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=AL42_RS13680;old_locus_tag=AL42_01631 NZ_KK316784.1 Protein Homology CDS 1774307 1775620 . + 0 ID=cds-WP_003407803.1;Parent=gene-AL42_RS13680;Dbxref=GenBank:WP_003407803.1;Name=WP_003407803.1;Ontology_term=GO:0009102,GO:0004015;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216084.1;locus_tag=AL42_RS13680;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_003407803.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1775617 1776777 . + . ID=gene-AL42_RS13685;Name=AL42_RS13685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13685;old_locus_tag=AL42_01632 NZ_KK316784.1 Protein Homology CDS 1775617 1776777 . + 0 ID=cds-WP_003407805.1;Parent=gene-AL42_RS13685;Dbxref=GenBank:WP_003407805.1;Name=WP_003407805.1;Ontology_term=GO:0009102,GO:0008710,GO:0030170,GO:0042803;gbkey=CDS;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA,pyridoxal phosphate binding|0030170||IEA,protein homodimerization activity|0042803||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177822.1;locus_tag=AL42_RS13685;product=8-amino-7-oxononanoate synthase;protein_id=WP_003407805.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1776774 1777454 . + . ID=gene-AL42_RS13690;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=AL42_RS13690;old_locus_tag=AL42_01633 NZ_KK316784.1 Protein Homology CDS 1776774 1777454 . + 0 ID=cds-WP_003407806.1;Parent=gene-AL42_RS13690;Dbxref=GenBank:WP_003407806.1;Name=WP_003407806.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216086.1;locus_tag=AL42_RS13690;product=dethiobiotin synthase;protein_id=WP_003407806.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1777454 1777963 . + . ID=gene-AL42_RS13695;Name=AL42_RS13695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13695;old_locus_tag=AL42_01634 NZ_KK316784.1 Protein Homology CDS 1777454 1777963 . + 0 ID=cds-WP_003407809.1;Parent=gene-AL42_RS13695;Dbxref=GenBank:WP_003407809.1;Name=WP_003407809.1;Ontology_term=GO:0004113,GO:0008664;gbkey=CDS;go_function=2'%2C3'-cyclic-nucleotide 3'-phosphodiesterase activity|0004113||IEA,RNA 2'%2C3'-cyclic 3'-phosphodiesterase activity|0008664||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216087.1;locus_tag=AL42_RS13695;product=2'-5' RNA ligase family protein;protein_id=WP_003407809.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1778109 1779504 . - . ID=gene-AL42_RS13700;Name=AL42_RS13700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS13700;old_locus_tag=AL42_01635;pseudo=true NZ_KK316784.1 Protein Homology CDS 1778109 1779504 . - 0 ID=cds-AL42_RS13700;Parent=gene-AL42_RS13700;Note=frameshifted;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015293051.1;locus_tag=AL42_RS13700;product=HNH endonuclease signature motif containing protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 1779952 1781001 . + . ID=gene-AL42_RS13705;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=AL42_RS13705;old_locus_tag=AL42_01637 NZ_KK316784.1 Protein Homology CDS 1779952 1781001 . + 0 ID=cds-WP_003898934.1;Parent=gene-AL42_RS13705;Dbxref=GenBank:WP_003898934.1;Name=WP_003898934.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216105.1;locus_tag=AL42_RS13705;product=biotin synthase BioB;protein_id=WP_003898934.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1781002 1781241 . + . ID=gene-AL42_RS13710;Name=AL42_RS13710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13710;old_locus_tag=AL42_01638 NZ_KK316784.1 Protein Homology CDS 1781002 1781241 . + 0 ID=cds-WP_003407914.1;Parent=gene-AL42_RS13710;Dbxref=GenBank:WP_003407914.1;Name=WP_003407914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216106.1;locus_tag=AL42_RS13710;product=biotin synthase auxiliary protein BsaP;protein_id=WP_003407914.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1781238 1781903 . + . ID=gene-AL42_RS13715;Name=AL42_RS13715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13715;old_locus_tag=AL42_01639 NZ_KK316784.1 Protein Homology CDS 1781238 1781903 . + 0 ID=cds-WP_003407924.1;Parent=gene-AL42_RS13715;Dbxref=GenBank:WP_003407924.1;Name=WP_003407924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216107.1;locus_tag=AL42_RS13715;product=DUF2567 domain-containing protein;protein_id=WP_003407924.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1782068 1783408 . - . ID=gene-AL42_RS13720;Name=AL42_RS13720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13720;old_locus_tag=AL42_01640 NZ_KK316784.1 Protein Homology CDS 1782068 1783408 . - 0 ID=cds-WP_003407926.1;Parent=gene-AL42_RS13720;Dbxref=GenBank:WP_003407926.1;Name=WP_003407926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216108.1;locus_tag=AL42_RS13720;product=lipase family protein;protein_id=WP_003407926.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1783665 1784375 . - . ID=gene-AL42_RS13725;Name=AL42_RS13725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13725;old_locus_tag=AL42_01641 NZ_KK316784.1 Protein Homology CDS 1783665 1784375 . - 0 ID=cds-WP_003898937.1;Parent=gene-AL42_RS13725;Dbxref=GenBank:WP_003898937.1;Name=WP_003898937.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216109.1;locus_tag=AL42_RS13725;product=NUDIX hydrolase;protein_id=WP_003898937.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1784424 1785473 . + . ID=gene-AL42_RS13730;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=AL42_RS13730;old_locus_tag=AL42_01642 NZ_KK316784.1 Protein Homology CDS 1784424 1785473 . + 0 ID=cds-WP_003407931.1;Parent=gene-AL42_RS13730;Dbxref=GenBank:WP_003407931.1;Name=WP_003407931.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011894476.1;locus_tag=AL42_RS13730;product=quinolinate synthase NadA;protein_id=WP_003407931.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1785473 1787056 . + . ID=gene-AL42_RS13735;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=AL42_RS13735;old_locus_tag=AL42_01643 NZ_KK316784.1 Protein Homology CDS 1785473 1787056 . + 0 ID=cds-WP_003901204.1;Parent=gene-AL42_RS13735;Dbxref=GenBank:WP_003901204.1;Name=WP_003901204.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216111.1;locus_tag=AL42_RS13735;product=L-aspartate oxidase;protein_id=WP_003901204.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1787056 1787913 . + . ID=gene-AL42_RS13740;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=AL42_RS13740;old_locus_tag=AL42_01644 NZ_KK316784.1 Protein Homology CDS 1787056 1787913 . + 0 ID=cds-WP_003898939.1;Parent=gene-AL42_RS13740;Dbxref=GenBank:WP_003898939.1;Name=WP_003898939.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216112.1;locus_tag=AL42_RS13740;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_003898939.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1787962 1788720 . + . ID=gene-AL42_RS13745;Name=AL42_RS13745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13745;old_locus_tag=AL42_01645 NZ_KK316784.1 Protein Homology CDS 1787962 1788720 . + 0 ID=cds-WP_003898940.1;Parent=gene-AL42_RS13745;Dbxref=GenBank:WP_003898940.1;Name=WP_003898940.1;Ontology_term=GO:0008757;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216113.1;locus_tag=AL42_RS13745;product=methyltransferase domain-containing protein;protein_id=WP_003898940.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1788741 1789151 . - . ID=gene-AL42_RS13750;Name=AL42_RS13750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13750;old_locus_tag=AL42_01646 NZ_KK316784.1 Protein Homology CDS 1788741 1789151 . - 0 ID=cds-WP_003407939.1;Parent=gene-AL42_RS13750;Dbxref=GenBank:WP_003407939.1;Name=WP_003407939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216114.1;locus_tag=AL42_RS13750;product=nitroreductase family deazaflavin-dependent oxidoreductase;protein_id=WP_003407939.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1789251 1790567 . + . ID=gene-AL42_RS13755;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=AL42_RS13755;old_locus_tag=AL42_01647 NZ_KK316784.1 Protein Homology CDS 1789251 1790567 . + 0 ID=cds-WP_003407943.1;Parent=gene-AL42_RS13755;Dbxref=GenBank:WP_003407943.1;Name=WP_003407943.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216115.1;locus_tag=AL42_RS13755;product=histidinol dehydrogenase;protein_id=WP_003407943.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1790564 1791706 . + . ID=gene-AL42_RS13760;Name=AL42_RS13760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13760;old_locus_tag=AL42_01648 NZ_KK316784.1 Protein Homology CDS 1790564 1791706 . + 0 ID=cds-WP_003407947.1;Parent=gene-AL42_RS13760;Dbxref=GenBank:WP_003407947.1;Name=WP_003407947.1;Ontology_term=GO:0000105,GO:0004400,GO:0030170;gbkey=CDS;go_function=histidinol-phosphate transaminase activity|0004400||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177823.1;locus_tag=AL42_RS13760;product=histidinol-phosphate transaminase;protein_id=WP_003407947.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1791703 1792335 . + . ID=gene-AL42_RS13765;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=AL42_RS13765;old_locus_tag=AL42_01649 NZ_KK316784.1 Protein Homology CDS 1791703 1792335 . + 0 ID=cds-WP_003407950.1;Parent=gene-AL42_RS13765;Dbxref=GenBank:WP_003407950.1;Name=WP_003407950.1;Ontology_term=GO:0000105,GO:0004424;gbkey=CDS;gene=hisB;go_function=imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216117.1;locus_tag=AL42_RS13765;product=imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_003407950.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1792332 1792952 . + . ID=gene-AL42_RS13770;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=AL42_RS13770;old_locus_tag=AL42_01650 NZ_KK316784.1 Protein Homology CDS 1792332 1792952 . + 0 ID=cds-WP_003407952.1;Parent=gene-AL42_RS13770;Dbxref=GenBank:WP_003407952.1;Name=WP_003407952.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216118.1;locus_tag=AL42_RS13770;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_003407952.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1792962 1793699 . + . ID=gene-AL42_RS13775;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=AL42_RS13775;old_locus_tag=AL42_01651 NZ_KK316784.1 Protein Homology CDS 1792962 1793699 . + 0 ID=cds-WP_003900374.1;Parent=gene-AL42_RS13775;Dbxref=GenBank:WP_003900374.1;Name=WP_003900374.1;Ontology_term=GO:0000105,GO:0000162,GO:0003949,GO:0004640,GO:0005737;gbkey=CDS;gene=priA;go_component=cytoplasm|0005737||IEA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=L-histidine biosynthetic process|0000105||IEA,L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216119.1;locus_tag=AL42_RS13775;product=bifunctional 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase/phosphoribosylanthranilate isomerase PriA;protein_id=WP_003900374.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1793707 1794519 . + . ID=gene-AL42_RS13780;Name=impA;gbkey=Gene;gene=impA;gene_biotype=protein_coding;locus_tag=AL42_RS13780;old_locus_tag=AL42_01652 NZ_KK316784.1 Protein Homology CDS 1793707 1794519 . + 0 ID=cds-WP_003407957.1;Parent=gene-AL42_RS13780;Dbxref=GenBank:WP_003407957.1;Name=WP_003407957.1;gbkey=CDS;gene=impA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216120.1;locus_tag=AL42_RS13780;product=inositol monophosphatase family protein;protein_id=WP_003407957.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1794521 1795324 . + . ID=gene-AL42_RS13785;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=AL42_RS13785;old_locus_tag=AL42_01653 NZ_KK316784.1 Protein Homology CDS 1794521 1795324 . + 0 ID=cds-WP_003898942.1;Parent=gene-AL42_RS13785;Dbxref=GenBank:WP_003898942.1;Name=WP_003898942.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216121.1;locus_tag=AL42_RS13785;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_003898942.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1795321 1795668 . + . ID=gene-AL42_RS13790;Name=hisI;gbkey=Gene;gene=hisI;gene_biotype=protein_coding;locus_tag=AL42_RS13790;old_locus_tag=AL42_01654 NZ_KK316784.1 Protein Homology CDS 1795321 1795668 . + 0 ID=cds-WP_003407963.1;Parent=gene-AL42_RS13790;Dbxref=GenBank:WP_003407963.1;Name=WP_003407963.1;Ontology_term=GO:0000105,GO:0004635;gbkey=CDS;gene=hisI;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216638.2;locus_tag=AL42_RS13790;product=phosphoribosyl-AMP cyclohydrolase;protein_id=WP_003407963.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1795849 1796931 . + . ID=gene-AL42_RS13795;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=AL42_RS13795;old_locus_tag=AL42_01655 NZ_KK316784.1 Protein Homology CDS 1795849 1796931 . + 0 ID=cds-WP_003898943.1;Parent=gene-AL42_RS13795;Dbxref=GenBank:WP_003898943.1;Name=WP_003898943.1;Ontology_term=GO:0006812,GO:0006816,GO:0008324,GO:0015369,GO:0016020;gbkey=CDS;gene=chaA;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,calcium:proton antiporter activity|0015369||IEA;go_process=monoatomic cation transport|0006812||IEA,calcium ion transport|0006816||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216123.1;locus_tag=AL42_RS13795;product=calcium:cation antiporter;protein_id=WP_003898943.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1796966 1797430 . - . ID=gene-AL42_RS13800;Name=bcpB;gbkey=Gene;gene=bcpB;gene_biotype=protein_coding;locus_tag=AL42_RS13800;old_locus_tag=AL42_01656 NZ_KK316784.1 Protein Homology CDS 1796966 1797430 . - 0 ID=cds-WP_003407974.1;Parent=gene-AL42_RS13800;Dbxref=GenBank:WP_003407974.1;Name=WP_003407974.1;gbkey=CDS;gene=bcpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216124.1;locus_tag=AL42_RS13800;product=peroxiredoxin BcpB;protein_id=WP_003407974.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1797571 1799121 . + . ID=gene-AL42_RS13805;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=AL42_RS13805;old_locus_tag=AL42_01657 NZ_KK316784.1 Protein Homology CDS 1797571 1799121 . + 0 ID=cds-WP_003407977.1;Parent=gene-AL42_RS13805;Dbxref=GenBank:WP_003407977.1;Name=WP_003407977.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216125.1;locus_tag=AL42_RS13805;product=anthranilate synthase component I;protein_id=WP_003407977.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1799111 1799818 . + . ID=gene-AL42_RS13810;Name=AL42_RS13810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13810;old_locus_tag=AL42_01658 NZ_KK316784.1 Protein Homology CDS 1799111 1799818 . + 0 ID=cds-WP_003407980.1;Parent=gene-AL42_RS13810;Dbxref=GenBank:WP_003407980.1;Name=WP_003407980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216126.1;locus_tag=AL42_RS13810;product=TIGR02234 family membrane protein;protein_id=WP_003407980.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1799908 1800726 . + . ID=gene-AL42_RS13815;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=AL42_RS13815;old_locus_tag=AL42_01659 NZ_KK316784.1 Protein Homology CDS 1799908 1800726 . + 0 ID=cds-WP_003407990.1;Parent=gene-AL42_RS13815;Dbxref=GenBank:WP_003407990.1;Name=WP_003407990.1;Ontology_term=GO:0006568,GO:0004425;gbkey=CDS;gene=trpC;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216127.1;locus_tag=AL42_RS13815;product=indole-3-glycerol phosphate synthase TrpC;protein_id=WP_003407990.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1800762 1802027 . + . ID=gene-AL42_RS13820;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=AL42_RS13820;old_locus_tag=AL42_01660 NZ_KK316784.1 Protein Homology CDS 1800762 1802027 . + 0 ID=cds-WP_016721143.1;Parent=gene-AL42_RS13820;Dbxref=GenBank:WP_016721143.1;Name=WP_016721143.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016721143.1;locus_tag=AL42_RS13820;product=tryptophan synthase subunit beta;protein_id=WP_016721143.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1802027 1802839 . + . ID=gene-AL42_RS13825;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=AL42_RS13825;old_locus_tag=AL42_01661 NZ_KK316784.1 Protein Homology CDS 1802027 1802839 . + 0 ID=cds-WP_003407999.1;Parent=gene-AL42_RS13825;Dbxref=GenBank:WP_003407999.1;Name=WP_003407999.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216129.1;locus_tag=AL42_RS13825;product=tryptophan synthase subunit alpha;protein_id=WP_003407999.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1802839 1804245 . + . ID=gene-AL42_RS13830;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=AL42_RS13830;old_locus_tag=AL42_01662 NZ_KK316784.1 Protein Homology CDS 1802839 1804245 . + 0 ID=cds-WP_003408002.1;Parent=gene-AL42_RS13830;Dbxref=GenBank:WP_003408002.1;Name=WP_003408002.1;gbkey=CDS;gene=lgt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216130.1;locus_tag=AL42_RS13830;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_003408002.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1804921 1805361 . + . ID=gene-AL42_RS13835;Name=AL42_RS13835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13835;old_locus_tag=AL42_01663 NZ_KK316784.1 Protein Homology CDS 1804921 1805361 . + 0 ID=cds-WP_003408004.1;Parent=gene-AL42_RS13835;Dbxref=GenBank:WP_003408004.1;Name=WP_003408004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216131.1;locus_tag=AL42_RS13835;product=NINE protein;protein_id=WP_003408004.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1805351 1805749 . + . ID=gene-AL42_RS13840;Name=AL42_RS13840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13840;old_locus_tag=AL42_01664 NZ_KK316784.1 Protein Homology CDS 1805351 1805749 . + 0 ID=cds-WP_003408005.1;Parent=gene-AL42_RS13840;Dbxref=GenBank:WP_003408005.1;Name=WP_003408005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216132.1;locus_tag=AL42_RS13840;product=DUF2752 domain-containing protein;protein_id=WP_003408005.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1805857 1807275 . + . ID=gene-AL42_RS13845;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=AL42_RS13845;old_locus_tag=AL42_01665 NZ_KK316784.1 Protein Homology CDS 1805857 1807275 . + 0 ID=cds-WP_003898945.1;Parent=gene-AL42_RS13845;Dbxref=GenBank:WP_003898945.1;Name=WP_003898945.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216133.1;locus_tag=AL42_RS13845;product=pyruvate kinase;protein_id=WP_003898945.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1807283 1808185 . + . ID=gene-AL42_RS13850;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=AL42_RS13850;old_locus_tag=AL42_01666 NZ_KK316784.1 Protein Homology CDS 1807283 1808185 . + 0 ID=cds-WP_003408017.1;Parent=gene-AL42_RS13850;Dbxref=GenBank:WP_003408017.1;Name=WP_003408017.1;Ontology_term=GO:0006637,GO:0047617;gbkey=CDS;gene=tesB;go_function=fatty acyl-CoA hydrolase activity|0047617||IEA;go_process=acyl-CoA metabolic process|0006637||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216134.1;locus_tag=AL42_RS13850;product=acyl-CoA thioesterase II;protein_id=WP_003408017.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1808243 1809697 . + . ID=gene-AL42_RS13855;Name=AL42_RS13855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13855;old_locus_tag=AL42_01667 NZ_KK316784.1 Protein Homology CDS 1808243 1809697 . + 0 ID=cds-WP_003900378.1;Parent=gene-AL42_RS13855;Dbxref=GenBank:WP_003900378.1;Name=WP_003900378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216135.1;locus_tag=AL42_RS13855;product=bifunctional lysylphosphatidylglycerol flippase/synthetase MprF;protein_id=WP_003900378.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1809631 1811361 . - . ID=gene-AL42_RS13860;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=AL42_RS13860;old_locus_tag=AL42_01668 NZ_KK316784.1 Protein Homology CDS 1809631 1811361 . - 0 ID=cds-WP_003908715.1;Parent=gene-AL42_RS13860;Dbxref=GenBank:WP_003908715.1;Name=WP_003908715.1;Ontology_term=GO:0033228,GO:0045454,GO:0005524,GO:0033230,GO:0050456,GO:0016020,GO:0055051;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex%2C integrated substrate binding|0055051||IEA;go_function=ATP binding|0005524||IEA,ABC-type cysteine transporter activity|0033230||IEA,L-cystine reductase (NADH) activity|0050456||IEA;go_process=cysteine export across plasma membrane|0033228||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216136.1;locus_tag=AL42_RS13860;product=thiol reductant ABC exporter subunit CydC;protein_id=WP_003908715.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1811358 1812965 . - . ID=gene-AL42_RS13865;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=AL42_RS13865;old_locus_tag=AL42_01669 NZ_KK316784.1 Protein Homology CDS 1811358 1812965 . - 0 ID=cds-WP_071854213.1;Parent=gene-AL42_RS13865;Dbxref=GenBank:WP_071854213.1;Name=WP_071854213.1;Ontology_term=GO:0033228,GO:0045454,GO:0005524,GO:0033230,GO:0050456,GO:0016020,GO:0055051;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex%2C integrated substrate binding|0055051||IEA;go_function=ATP binding|0005524||IEA,ABC-type cysteine transporter activity|0033230||IEA,L-cystine reductase (NADH) activity|0050456||IEA;go_process=cysteine export across plasma membrane|0033228||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020725080.1;locus_tag=AL42_RS13865;product=thiol reductant ABC exporter subunit CydD;protein_id=WP_071854213.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1813028 1814068 . - . ID=gene-AL42_RS13870;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=AL42_RS13870;old_locus_tag=AL42_01670 NZ_KK316784.1 Protein Homology CDS 1813028 1814068 . - 0 ID=cds-WP_003408024.1;Parent=gene-AL42_RS13870;Dbxref=GenBank:WP_003408024.1;Name=WP_003408024.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216138.1;locus_tag=AL42_RS13870;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_003408024.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1814098 1815555 . - . ID=gene-AL42_RS13875;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=AL42_RS13875;old_locus_tag=AL42_01671 NZ_KK316784.1 Protein Homology CDS 1814098 1815555 . - 0 ID=cds-WP_003408027.1;Parent=gene-AL42_RS13875;Dbxref=GenBank:WP_003408027.1;Name=WP_003408027.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;gene=cydA;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177824.1;locus_tag=AL42_RS13875;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_003408027.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1815666 1816253 . - . ID=gene-AL42_RS13880;Name=AL42_RS13880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13880;old_locus_tag=AL42_01672 NZ_KK316784.1 Protein Homology CDS 1815666 1816253 . - 0 ID=cds-WP_003898948.1;Parent=gene-AL42_RS13880;Dbxref=GenBank:WP_003898948.1;Name=WP_003898948.1;Ontology_term=GO:0009268;gbkey=CDS;go_process=response to pH|0009268||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216140.1;locus_tag=AL42_RS13880;product=HdeD family acid-resistance protein;protein_id=WP_003898948.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1816282 1817613 . - . ID=gene-AL42_RS13885;Name=cya;gbkey=Gene;gene=cya;gene_biotype=protein_coding;locus_tag=AL42_RS13885;old_locus_tag=AL42_01673 NZ_KK316784.1 Protein Homology CDS 1816282 1817613 . - 0 ID=cds-WP_003408035.1;Parent=gene-AL42_RS13885;Dbxref=GenBank:WP_003408035.1;Name=WP_003408035.1;gbkey=CDS;gene=cya;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216141.2;locus_tag=AL42_RS13885;product=adenylate cyclase;protein_id=WP_003408035.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1817680 1817756 . - . ID=gene-AL42_RS13890;Name=AL42_RS13890;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL42_RS13890;old_locus_tag=AL42_01674 NZ_KK316784.1 tRNAscan-SE tRNA 1817680 1817756 . - . ID=rna-AL42_RS13890;Parent=gene-AL42_RS13890;anticodon=(pos:complement(1817720..1817722));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS13890;product=tRNA-Leu NZ_KK316784.1 tRNAscan-SE exon 1817680 1817756 . - . ID=exon-AL42_RS13890-1;Parent=rna-AL42_RS13890;anticodon=(pos:complement(1817720..1817722));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS13890;product=tRNA-Leu NZ_KK316784.1 RefSeq gene 1817848 1818465 . + . ID=gene-AL42_RS13895;Name=AL42_RS13895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13895;old_locus_tag=AL42_01675 NZ_KK316784.1 Protein Homology CDS 1817848 1818465 . + 0 ID=cds-WP_003408045.1;Parent=gene-AL42_RS13895;Dbxref=GenBank:WP_003408045.1;Name=WP_003408045.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216142.1;locus_tag=AL42_RS13895;product=ANTAR domain-containing response regulator;protein_id=WP_003408045.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1818533 1819741 . - . ID=gene-AL42_RS13900;Name=AL42_RS13900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13900;old_locus_tag=AL42_01676 NZ_KK316784.1 Protein Homology CDS 1818533 1819741 . - 0 ID=cds-WP_003408054.1;Parent=gene-AL42_RS13900;Dbxref=GenBank:WP_003408054.1;Name=WP_003408054.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216143.1;locus_tag=AL42_RS13900;product=lipid-transfer protein;protein_id=WP_003408054.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1819738 1820229 . - . ID=gene-AL42_RS13905;Name=AL42_RS13905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13905;old_locus_tag=AL42_01677 NZ_KK316784.1 Protein Homology CDS 1819738 1820229 . - 0 ID=cds-WP_003408058.1;Parent=gene-AL42_RS13905;Dbxref=GenBank:WP_003408058.1;Name=WP_003408058.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216144.1;locus_tag=AL42_RS13905;product=Zn-ribbon domain-containing OB-fold protein;protein_id=WP_003408058.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1820333 1823047 . + . ID=gene-AL42_RS13910;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=AL42_RS13910;old_locus_tag=AL42_01678 NZ_KK316784.1 Protein Homology CDS 1820333 1823047 . + 0 ID=cds-WP_003901211.1;Parent=gene-AL42_RS13910;Dbxref=GenBank:WP_003901211.1;Name=WP_003901211.1;Ontology_term=GO:0006260,GO:0003887;gbkey=CDS;gene=polA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216145.1;locus_tag=AL42_RS13910;product=DNA polymerase I;protein_id=WP_003901211.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1823210 1824655 . + . ID=gene-AL42_RS13915;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=AL42_RS13915;old_locus_tag=AL42_01679 NZ_KK316784.1 Protein Homology CDS 1823210 1824655 . + 0 ID=cds-WP_003408066.1;Parent=gene-AL42_RS13915;Dbxref=GenBank:WP_003408066.1;Name=WP_003408066.1;Ontology_term=GO:0003676;gbkey=CDS;gene=rpsA;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216146.1;locus_tag=AL42_RS13915;product=30S ribosomal protein S1;protein_id=WP_003408066.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1824681 1825904 . + . ID=gene-AL42_RS13920;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=AL42_RS13920;old_locus_tag=AL42_01680 NZ_KK316784.1 Protein Homology CDS 1824681 1825904 . + 0 ID=cds-WP_003408069.1;Parent=gene-AL42_RS13920;Dbxref=GenBank:WP_003408069.1;Name=WP_003408069.1;Ontology_term=GO:0015937,GO:0004140,GO:0005524;gbkey=CDS;gene=coaE;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216147.1;locus_tag=AL42_RS13920;product=dephospho-CoA kinase;protein_id=WP_003408069.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1825943 1826059 . + . ID=gene-AL42_RS28130;Name=AL42_RS28130;end_range=1826059,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS28130;partial=true;pseudo=true;start_range=.,1825943 NZ_KK316784.1 Protein Homology CDS 1825943 1826059 . + 0 ID=cds-AL42_RS28130;Parent=gene-AL42_RS28130;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1826059,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216242.1;locus_tag=AL42_RS28130;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1825943;transl_table=11 NZ_KK316784.1 RefSeq gene 1826055 1826498 . - . ID=gene-AL42_RS13925;Name=AL42_RS13925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13925;old_locus_tag=AL42_01681 NZ_KK316784.1 Protein Homology CDS 1826055 1826498 . - 0 ID=cds-WP_003898953.1;Parent=gene-AL42_RS13925;Dbxref=GenBank:WP_003898953.1;Name=WP_003898953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216148.1;locus_tag=AL42_RS13925;product=ribonuclease FAU-1 family protein;protein_id=WP_003898953.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1826680 1828839 . + . ID=gene-AL42_RS13930;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=AL42_RS13930;old_locus_tag=AL42_01682 NZ_KK316784.1 Protein Homology CDS 1826680 1828839 . + 0 ID=cds-WP_003911575.1;Parent=gene-AL42_RS13930;Dbxref=GenBank:WP_003911575.1;Name=WP_003911575.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019731486.1;locus_tag=AL42_RS13930;product=excinuclease ABC subunit UvrB;protein_id=WP_003911575.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1828836 1830251 . + . ID=gene-AL42_RS13935;Name=AL42_RS13935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13935;old_locus_tag=AL42_01683 NZ_KK316784.1 Protein Homology CDS 1828836 1830251 . + 0 ID=cds-WP_003408079.1;Parent=gene-AL42_RS13935;Dbxref=GenBank:WP_003408079.1;Name=WP_003408079.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216150.1;locus_tag=AL42_RS13935;product=MFS transporter;protein_id=WP_003408079.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1830240 1831910 . - . ID=gene-AL42_RS13940;Name=AL42_RS13940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13940;old_locus_tag=AL42_01684 NZ_KK316784.1 Protein Homology CDS 1830240 1831910 . - 0 ID=cds-WP_003408080.1;Parent=gene-AL42_RS13940;Dbxref=GenBank:WP_003408080.1;Name=WP_003408080.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216151.1;locus_tag=AL42_RS13940;product=mannosyltransferase;protein_id=WP_003408080.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1832119 1832559 . + . ID=gene-AL42_RS13945;Name=AL42_RS13945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13945;old_locus_tag=AL42_01685 NZ_KK316784.1 Protein Homology CDS 1832119 1832559 . + 0 ID=cds-WP_003408085.1;Parent=gene-AL42_RS13945;Dbxref=GenBank:WP_003408085.1;Name=WP_003408085.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216152.1;locus_tag=AL42_RS13945;product=universal stress protein;protein_id=WP_003408085.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1832566 1833243 . - . ID=gene-AL42_RS13950;Name=AL42_RS13950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13950;old_locus_tag=AL42_01686 NZ_KK316784.1 Protein Homology CDS 1832566 1833243 . - 0 ID=cds-WP_003408088.1;Parent=gene-AL42_RS13950;Dbxref=GenBank:WP_003408088.1;Name=WP_003408088.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003408088.1;locus_tag=AL42_RS13950;product=MBL fold metallo-hydrolase;protein_id=WP_003408088.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1833409 1836327 . + . ID=gene-AL42_RS13955;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=AL42_RS13955;old_locus_tag=AL42_01687 NZ_KK316784.1 Protein Homology CDS 1833409 1836327 . + 0 ID=cds-WP_003408092.1;Parent=gene-AL42_RS13955;Dbxref=GenBank:WP_003408092.1;Name=WP_003408092.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216154.1;locus_tag=AL42_RS13955;product=excinuclease ABC subunit UvrA;protein_id=WP_003408092.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1836384 1836641 . - . ID=gene-AL42_RS13960;Name=AL42_RS13960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13960;old_locus_tag=AL42_01688 NZ_KK316784.1 Protein Homology CDS 1836384 1836641 . - 0 ID=cds-WP_003408096.1;Parent=gene-AL42_RS13960;Dbxref=GenBank:WP_003408096.1;Name=WP_003408096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177650.1;locus_tag=AL42_RS13960;product=PspA/IM30 family protein;protein_id=WP_003408096.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1836657 1838126 . - . ID=gene-AL42_RS13965;Name=AL42_RS13965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13965;old_locus_tag=AL42_01689 NZ_KK316784.1 Protein Homology CDS 1836657 1838126 . - 0 ID=cds-WP_003408099.1;Parent=gene-AL42_RS13965;Dbxref=GenBank:WP_003408099.1;Name=WP_003408099.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216155.1;locus_tag=AL42_RS13965;product=alpha/beta hydrolase;protein_id=WP_003408099.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1838185 1841520 . - . ID=gene-AL42_RS13970;Name=lysX;gbkey=Gene;gene=lysX;gene_biotype=protein_coding;locus_tag=AL42_RS13970;old_locus_tag=AL42_01690 NZ_KK316784.1 Protein Homology CDS 1838185 1841520 . - 0 ID=cds-WP_009940556.1;Parent=gene-AL42_RS13970;Dbxref=GenBank:WP_009940556.1;Name=WP_009940556.1;Ontology_term=GO:0006430,GO:0000166,GO:0003676,GO:0004824,GO:0005524;gbkey=CDS;gene=lysX;go_function=nucleotide binding|0000166||IEA,nucleic acid binding|0003676||IEA,lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011560376.1;locus_tag=AL42_RS13970;product=bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX;protein_id=WP_009940556.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1841941 1842546 . + . ID=gene-AL42_RS13975;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=AL42_RS13975;old_locus_tag=AL42_01691 NZ_KK316784.1 Protein Homology CDS 1841941 1842546 . + 0 ID=cds-WP_003901217.1;Parent=gene-AL42_RS13975;Dbxref=GenBank:WP_003901217.1;Name=WP_003901217.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216157.1;locus_tag=AL42_RS13975;product=translation initiation factor IF-3;protein_id=WP_003901217.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1842596 1842790 . + . ID=gene-AL42_RS13980;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=AL42_RS13980;old_locus_tag=AL42_01692 NZ_KK316784.1 Protein Homology CDS 1842596 1842790 . + 0 ID=cds-WP_003408106.1;Parent=gene-AL42_RS13980;Dbxref=GenBank:WP_003408106.1;Name=WP_003408106.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003876267.1;locus_tag=AL42_RS13980;product=50S ribosomal protein L35;protein_id=WP_003408106.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1842852 1843241 . + . ID=gene-AL42_RS13985;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=AL42_RS13985;old_locus_tag=AL42_01693 NZ_KK316784.1 Protein Homology CDS 1842852 1843241 . + 0 ID=cds-WP_003408108.1;Parent=gene-AL42_RS13985;Dbxref=GenBank:WP_003408108.1;Name=WP_003408108.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216159.1;locus_tag=AL42_RS13985;product=50S ribosomal protein L20;protein_id=WP_003408108.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1843274 1844056 . + . ID=gene-AL42_RS13990;Name=tsnR;gbkey=Gene;gene=tsnR;gene_biotype=protein_coding;locus_tag=AL42_RS13990;old_locus_tag=AL42_01694 NZ_KK316784.1 Protein Homology CDS 1843274 1844056 . + 0 ID=cds-WP_003408112.1;Parent=gene-AL42_RS13990;Dbxref=GenBank:WP_003408112.1;Name=WP_003408112.1;Ontology_term=GO:0006396,GO:0032259,GO:0003723,GO:0008173,GO:1904047;gbkey=CDS;gene=tsnR;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA processing|0006396||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216160.1;locus_tag=AL42_RS13990;product=TrmH family RNA methyltransferase;protein_id=WP_003408112.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1844067 1845122 . - . ID=gene-AL42_RS13995;Name=AL42_RS13995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS13995;old_locus_tag=AL42_01695 NZ_KK316784.1 Protein Homology CDS 1844067 1845122 . - 0 ID=cds-WP_003408141.1;Parent=gene-AL42_RS13995;Dbxref=GenBank:WP_003408141.1;Name=WP_003408141.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216161.1;locus_tag=AL42_RS13995;product=oxygenase MpaB family protein;protein_id=WP_003408141.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1845432 1846364 . + . ID=gene-AL42_RS14000;Name=AL42_RS14000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14000;old_locus_tag=AL42_01696 NZ_KK316784.1 Protein Homology CDS 1845432 1846364 . + 0 ID=cds-WP_003900384.1;Parent=gene-AL42_RS14000;Dbxref=GenBank:WP_003900384.1;Name=WP_003900384.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177825.1;locus_tag=AL42_RS14000;product=PE family protein;protein_id=WP_003900384.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1846478 1847392 . + . ID=gene-AL42_RS14005;Name=AL42_RS14005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14005;old_locus_tag=AL42_01697 NZ_KK316784.1 Protein Homology CDS 1846478 1847392 . + 0 ID=cds-WP_003913695.1;Parent=gene-AL42_RS14005;Dbxref=GenBank:WP_003913695.1;Name=WP_003913695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003913695.1;locus_tag=AL42_RS14005;product=adenylate cyclase;protein_id=WP_003913695.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1847399 1848205 . + . ID=gene-AL42_RS14010;Name=AL42_RS14010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14010;old_locus_tag=AL42_01698 NZ_KK316784.1 Protein Homology CDS 1847399 1848205 . + 0 ID=cds-WP_003408145.1;Parent=gene-AL42_RS14010;Dbxref=GenBank:WP_003408145.1;Name=WP_003408145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216164.1;locus_tag=AL42_RS14010;product=rhomboid-like protein;protein_id=WP_003408145.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1848401 1849426 . + . ID=gene-AL42_RS14015;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=AL42_RS14015;old_locus_tag=AL42_01699 NZ_KK316784.1 Protein Homology CDS 1848401 1849426 . + 0 ID=cds-WP_003901219.1;Parent=gene-AL42_RS14015;Dbxref=GenBank:WP_003901219.1;Name=WP_003901219.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003920416.1;locus_tag=AL42_RS14015;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_003901219.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1849426 1851921 . + . ID=gene-AL42_RS14020;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=AL42_RS14020;old_locus_tag=AL42_01700 NZ_KK316784.1 Protein Homology CDS 1849426 1851921 . + 0 ID=cds-WP_003901220.1;Parent=gene-AL42_RS14020;Dbxref=GenBank:WP_003901220.1;Name=WP_003901220.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216166.1;locus_tag=AL42_RS14020;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_003901220.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1852015 1855071 . - . ID=gene-AL42_RS14025;Name=AL42_RS14025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14025;old_locus_tag=AL42_01701 NZ_KK316784.1 Protein Homology CDS 1852015 1855071 . - 0 ID=cds-WP_014584767.1;Parent=gene-AL42_RS14025;Dbxref=GenBank:WP_014584767.1;Name=WP_014584767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177826.1;locus_tag=AL42_RS14025;product=PE domain-containing protein;protein_id=WP_014584767.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1855265 1856323 . + . ID=gene-AL42_RS14030;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=AL42_RS14030;old_locus_tag=AL42_01702 NZ_KK316784.1 Protein Homology CDS 1855265 1856323 . + 0 ID=cds-WP_003898960.1;Parent=gene-AL42_RS14030;Dbxref=GenBank:WP_003898960.1;Name=WP_003898960.1;Ontology_term=GO:0006526,GO:0006592,GO:0003942,GO:0070401;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA,NADP+ binding|0070401||IEA;go_process=L-arginine biosynthetic process|0006526||IEA,ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216168.1;locus_tag=AL42_RS14030;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_003898960.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1856320 1857534 . + . ID=gene-AL42_RS14035;Name=argJ;gbkey=Gene;gene=argJ;gene_biotype=protein_coding;locus_tag=AL42_RS14035;old_locus_tag=AL42_01703 NZ_KK316784.1 Protein Homology CDS 1856320 1857534 . + 0 ID=cds-WP_003408160.1;Parent=gene-AL42_RS14035;Dbxref=GenBank:WP_003408160.1;Name=WP_003408160.1;Ontology_term=GO:0006526,GO:0004358;gbkey=CDS;gene=argJ;go_function=L-glutamate N-acetyltransferase activity%2C acting on acetyl-L-ornithine as donor|0004358||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216169.1;locus_tag=AL42_RS14035;product=bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ;protein_id=WP_003408160.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1857531 1858415 . + . ID=gene-AL42_RS14040;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=AL42_RS14040;old_locus_tag=AL42_01704 NZ_KK316784.1 Protein Homology CDS 1857531 1858415 . + 0 ID=cds-WP_003408161.1;Parent=gene-AL42_RS14040;Dbxref=GenBank:WP_003408161.1;Name=WP_003408161.1;Ontology_term=GO:0006592,GO:0003991,GO:0005737;gbkey=CDS;gene=argB;go_component=cytoplasm|0005737||IEA;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216170.1;locus_tag=AL42_RS14040;product=acetylglutamate kinase;protein_id=WP_003408161.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1858412 1859614 . + . ID=gene-AL42_RS14045;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;locus_tag=AL42_RS14045;old_locus_tag=AL42_01705 NZ_KK316784.1 Protein Homology CDS 1858412 1859614 . + 0 ID=cds-WP_003408163.1;Parent=gene-AL42_RS14045;Dbxref=GenBank:WP_003408163.1;Name=WP_003408163.1;Ontology_term=GO:0006525,GO:0008483,GO:0030170;gbkey=CDS;gene=argD;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216171.1;locus_tag=AL42_RS14045;product=acetylornithine transaminase;protein_id=WP_003408163.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1859611 1860534 . + . ID=gene-AL42_RS14050;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=AL42_RS14050;old_locus_tag=AL42_01706 NZ_KK316784.1 Protein Homology CDS 1859611 1860534 . + 0 ID=cds-WP_003408165.1;Parent=gene-AL42_RS14050;Dbxref=GenBank:WP_003408165.1;Name=WP_003408165.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216172.1;locus_tag=AL42_RS14050;product=ornithine carbamoyltransferase;protein_id=WP_003408165.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1860531 1861043 . + . ID=gene-AL42_RS14055;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=AL42_RS14055;old_locus_tag=AL42_01707 NZ_KK316784.1 Protein Homology CDS 1860531 1861043 . + 0 ID=cds-WP_003408178.1;Parent=gene-AL42_RS14055;Dbxref=GenBank:WP_003408178.1;Name=WP_003408178.1;Ontology_term=GO:0006355,GO:0006525,GO:0003700;gbkey=CDS;gene=argR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216173.1;locus_tag=AL42_RS14055;product=arginine repressor;protein_id=WP_003408178.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1861052 1862248 . + . ID=gene-AL42_RS14060;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=AL42_RS14060;old_locus_tag=AL42_01708 NZ_KK316784.1 Protein Homology CDS 1861052 1862248 . + 0 ID=cds-WP_003408179.1;Parent=gene-AL42_RS14060;Dbxref=GenBank:WP_003408179.1;Name=WP_003408179.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216174.1;locus_tag=AL42_RS14060;product=argininosuccinate synthase;protein_id=WP_003408179.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1862328 1863740 . + . ID=gene-AL42_RS14065;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=AL42_RS14065;old_locus_tag=AL42_01709 NZ_KK316784.1 Protein Homology CDS 1862328 1863740 . + 0 ID=cds-WP_003408180.1;Parent=gene-AL42_RS14065;Dbxref=GenBank:WP_003408180.1;Name=WP_003408180.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216175.1;locus_tag=AL42_RS14065;product=argininosuccinate lyase;protein_id=WP_003408180.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1863849 1864910 . + . ID=gene-AL42_RS14070;Name=AL42_RS14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14070;old_locus_tag=AL42_01710 NZ_KK316784.1 Protein Homology CDS 1863849 1864910 . + 0 ID=cds-WP_003408181.1;Parent=gene-AL42_RS14070;Dbxref=GenBank:WP_003408181.1;Name=WP_003408181.1;Ontology_term=GO:0030639,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=polyketide biosynthetic process|0030639||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216176.1;locus_tag=AL42_RS14070;product=type III polyketide synthase;protein_id=WP_003408181.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1864993 1871373 . + . ID=gene-AL42_RS14075;Name=AL42_RS14075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14075;old_locus_tag=AL42_01711 NZ_KK316784.1 Protein Homology CDS 1864993 1871373 . + 0 ID=cds-WP_003902218.1;Parent=gene-AL42_RS14075;Dbxref=GenBank:WP_003902218.1;Name=WP_003902218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216177.1;locus_tag=AL42_RS14075;product=type I polyketide synthase;protein_id=WP_003902218.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1871393 1876201 . + . ID=gene-AL42_RS14080;Name=AL42_RS14080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14080;old_locus_tag=AL42_01712 NZ_KK316784.1 Protein Homology CDS 1871393 1876201 . + 0 ID=cds-WP_031721810.1;Parent=gene-AL42_RS14080;Dbxref=GenBank:WP_031721810.1;Name=WP_031721810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216178.1;locus_tag=AL42_RS14080;product=type I polyketide synthase;protein_id=WP_031721810.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1876177 1877709 . + . ID=gene-AL42_RS27605;Name=AL42_RS27605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27605;old_locus_tag=AL42_01713 NZ_KK316784.1 Protein Homology CDS 1876177 1877709 . + 0 ID=cds-WP_003901230.1;Parent=gene-AL42_RS27605;Dbxref=GenBank:WP_003901230.1;Name=WP_003901230.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020243.6;locus_tag=AL42_RS27605;product=type I polyketide synthase;protein_id=WP_003901230.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1877715 1879865 . + . ID=gene-AL42_RS14090;Name=AL42_RS14090;end_range=1879865,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS14090;old_locus_tag=AL42_01714;partial=true;pseudo=true NZ_KK316784.1 Protein Homology CDS 1877715 1879865 . + 0 ID=cds-AL42_RS14090;Parent=gene-AL42_RS14090;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006633,GO:0030639,GO:0034081;end_range=1879865,.;gbkey=CDS;go_component=polyketide synthase complex|0034081||IEA;go_process=fatty acid biosynthetic process|0006633||IEA,polyketide biosynthetic process|0030639||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014385090.1;locus_tag=AL42_RS14090;partial=true;product=type I polyketide synthase;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 1879904 1881165 . + . ID=gene-AL42_RS14095;Name=AL42_RS14095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14095;old_locus_tag=AL42_01716 NZ_KK316784.1 Protein Homology CDS 1879904 1880192 . + 0 ID=cds-WP_087902221.1-4;Parent=gene-AL42_RS14095;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL42_RS14095;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316784.1 Protein Homology CDS 1880192 1881165 . + 2 ID=cds-WP_087902221.1-4;Parent=gene-AL42_RS14095;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL42_RS14095;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1881207 1882127 . + . ID=gene-AL42_RS0104755;Name=AL42_RS0104755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS0104755;partial=true;pseudo=true;start_range=.,1881207 NZ_KK316784.1 Protein Homology CDS 1881207 1882127 . + 0 ID=cds-AL42_RS0104755;Parent=gene-AL42_RS0104755;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216180.1;locus_tag=AL42_RS0104755;partial=true;product=phosphopantetheine-binding protein;pseudo=true;start_range=.,1881207;transl_table=11 NZ_KK316784.1 RefSeq gene 1882274 1883335 . + . ID=gene-AL42_RS14100;Name=AL42_RS14100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14100;old_locus_tag=AL42_01717 NZ_KK316784.1 Protein Homology CDS 1882274 1883335 . + 0 ID=cds-WP_003408248.1;Parent=gene-AL42_RS14100;Dbxref=GenBank:WP_003408248.1;Name=WP_003408248.1;Ontology_term=GO:0030639,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=polyketide biosynthetic process|0030639||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216181.1;locus_tag=AL42_RS14100;product=type III polyketide synthase;protein_id=WP_003408248.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1883318 1884610 . - . ID=gene-AL42_RS14105;Name=AL42_RS14105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14105;old_locus_tag=AL42_01718 NZ_KK316784.1 Protein Homology CDS 1883318 1884610 . - 0 ID=cds-WP_003901231.1;Parent=gene-AL42_RS14105;Dbxref=GenBank:WP_003901231.1;Name=WP_003901231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216182.1;locus_tag=AL42_RS14105;product=cytochrome P450;protein_id=WP_003901231.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1884625 1886400 . - . ID=gene-AL42_RS0104760;Name=AL42_RS0104760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0104760 NZ_KK316784.1 Protein Homology CDS 1884625 1886400 . - 0 ID=cds-WP_003408257.1;Parent=gene-AL42_RS0104760;Dbxref=GenBank:WP_003408257.1;Name=WP_003408257.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015303143.1;locus_tag=AL42_RS0104760;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_003408257.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1886783 1887145 . + . ID=gene-AL42_RS14110;Name=AL42_RS14110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14110;old_locus_tag=AL42_01721 NZ_KK316784.1 Protein Homology CDS 1886783 1887145 . + 0 ID=cds-WP_003901232.1;Parent=gene-AL42_RS14110;Dbxref=GenBank:WP_003901232.1;Name=WP_003901232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216185.1;locus_tag=AL42_RS14110;product=hypothetical protein;protein_id=WP_003901232.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1887178 1887525 . + . ID=gene-AL42_RS14115;Name=AL42_RS14115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14115;old_locus_tag=AL42_01722 NZ_KK316784.1 Protein Homology CDS 1887178 1887525 . + 0 ID=cds-WP_003408261.1;Parent=gene-AL42_RS14115;Dbxref=GenBank:WP_003408261.1;Name=WP_003408261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216186.1;locus_tag=AL42_RS14115;product=DUF427 domain-containing protein;protein_id=WP_003408261.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1887533 1887925 . + . ID=gene-AL42_RS14120;Name=AL42_RS14120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14120;old_locus_tag=AL42_01723 NZ_KK316784.1 Protein Homology CDS 1887533 1887925 . + 0 ID=cds-WP_003408263.1;Parent=gene-AL42_RS14120;Dbxref=GenBank:WP_003408263.1;Name=WP_003408263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216187.1;locus_tag=AL42_RS14120;product=hypothetical protein;protein_id=WP_003408263.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1887934 1889265 . - . ID=gene-AL42_RS14125;Name=AL42_RS14125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14125;old_locus_tag=AL42_01724 NZ_KK316784.1 Protein Homology CDS 1887934 1889265 . - 0 ID=cds-WP_003408264.1;Parent=gene-AL42_RS14125;Dbxref=GenBank:WP_003408264.1;Name=WP_003408264.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216188.1;locus_tag=AL42_RS14125;product=MFS transporter;protein_id=WP_003408264.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1889358 1890290 . - . ID=gene-AL42_RS14130;Name=AL42_RS14130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14130;old_locus_tag=AL42_01725 NZ_KK316784.1 Protein Homology CDS 1889358 1890290 . - 0 ID=cds-WP_003408265.1;Parent=gene-AL42_RS14130;Dbxref=GenBank:WP_003408265.1;Name=WP_003408265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216189.1;locus_tag=AL42_RS14130;product=transglutaminase-like domain-containing protein;protein_id=WP_003408265.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1890318 1890974 . - . ID=gene-AL42_RS14135;Name=AL42_RS14135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14135;old_locus_tag=AL42_01726 NZ_KK316784.1 Protein Homology CDS 1890318 1890974 . - 0 ID=cds-WP_003408266.1;Parent=gene-AL42_RS14135;Dbxref=GenBank:WP_003408266.1;Name=WP_003408266.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216190.1;locus_tag=AL42_RS14135;product=ArsR/SmtB family transcription factor;protein_id=WP_003408266.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1891159 1891305 . + . ID=gene-AL42_RS27185;Name=AL42_RS27185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27185 NZ_KK316784.1 Protein Homology CDS 1891159 1891305 . + 0 ID=cds-WP_003408267.1;Parent=gene-AL42_RS27185;Dbxref=GenBank:WP_003408267.1;Name=WP_003408267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015303146.1;locus_tag=AL42_RS27185;product=hypothetical protein;protein_id=WP_003408267.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1891299 1892033 . - . ID=gene-AL42_RS14140;Name=cmr;gbkey=Gene;gene=cmr;gene_biotype=protein_coding;locus_tag=AL42_RS14140;old_locus_tag=AL42_01727 NZ_KK316784.1 Protein Homology CDS 1891299 1892033 . - 0 ID=cds-WP_003898967.1;Parent=gene-AL42_RS14140;Dbxref=GenBank:WP_003898967.1;Name=WP_003898967.1;gbkey=CDS;gene=cmr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216191.1;locus_tag=AL42_RS14140;product=HTH-type transcriptional regulator Cmr;protein_id=WP_003898967.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1892105 1892809 . + . ID=gene-AL42_RS0104770;Name=AL42_RS0104770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0104770;old_locus_tag=AL42_01728 NZ_KK316784.1 Protein Homology CDS 1892105 1892809 . + 0 ID=cds-WP_003408270.1;Parent=gene-AL42_RS0104770;Dbxref=GenBank:WP_003408270.1;Name=WP_003408270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216192.1;locus_tag=AL42_RS0104770;product=peroxiredoxin-like family protein;protein_id=WP_003408270.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1892806 1893354 . + . ID=gene-AL42_RS14145;Name=dsbF;gbkey=Gene;gene=dsbF;gene_biotype=protein_coding;locus_tag=AL42_RS14145;old_locus_tag=AL42_01729 NZ_KK316784.1 Protein Homology CDS 1892806 1893354 . + 0 ID=cds-WP_003408271.1;Parent=gene-AL42_RS14145;Dbxref=GenBank:WP_003408271.1;Name=WP_003408271.1;gbkey=CDS;gene=dsbF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216193.1;locus_tag=AL42_RS14145;product=disulfide bond-forming protein DsbF;protein_id=WP_003408271.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1893455 1894357 . + . ID=gene-AL42_RS14150;Name=AL42_RS14150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14150;old_locus_tag=AL42_01730 NZ_KK316784.1 Protein Homology CDS 1893455 1894357 . + 0 ID=cds-WP_003408272.1;Parent=gene-AL42_RS14150;Dbxref=GenBank:WP_003408272.1;Name=WP_003408272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216194.1;locus_tag=AL42_RS14150;product=Rv1678 family membrane protein;protein_id=WP_003408272.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1894357 1895478 . + . ID=gene-AL42_RS14155;Name=fadE16;gbkey=Gene;gene=fadE16;gene_biotype=protein_coding;locus_tag=AL42_RS14155;old_locus_tag=AL42_01731 NZ_KK316784.1 Protein Homology CDS 1894357 1895478 . + 0 ID=cds-WP_003408274.1;Parent=gene-AL42_RS14155;Dbxref=GenBank:WP_003408274.1;Name=WP_003408274.1;gbkey=CDS;gene=fadE16;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216195.1;locus_tag=AL42_RS14155;product=Rv1679 family acyl-CoA dehydrogenase;protein_id=WP_003408274.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1895487 1896311 . + . ID=gene-AL42_RS14160;Name=AL42_RS14160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14160;old_locus_tag=AL42_01732 NZ_KK316784.1 Protein Homology CDS 1895487 1896311 . + 0 ID=cds-WP_003898971.1;Parent=gene-AL42_RS14160;Dbxref=GenBank:WP_003898971.1;Name=WP_003898971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216196.1;locus_tag=AL42_RS14160;product=Rv1680 family SBP-like protein;protein_id=WP_003898971.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1896308 1897300 . + . ID=gene-AL42_RS14165;Name=moeX;gbkey=Gene;gene=moeX;gene_biotype=protein_coding;locus_tag=AL42_RS14165;old_locus_tag=AL42_01733 NZ_KK316784.1 Protein Homology CDS 1896308 1897300 . + 0 ID=cds-WP_003905632.1;Parent=gene-AL42_RS14165;Dbxref=GenBank:WP_003905632.1;Name=WP_003905632.1;gbkey=CDS;gene=moeX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216197.1;locus_tag=AL42_RS14165;product=Rv1681 family radical SAM protein;protein_id=WP_003905632.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1897530 1898378 . + . ID=gene-AL42_RS14170;Name=AL42_RS14170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14170;old_locus_tag=AL42_01734 NZ_KK316784.1 Protein Homology CDS 1897530 1898378 . + 0 ID=cds-WP_003898973.1;Parent=gene-AL42_RS14170;Dbxref=GenBank:WP_003898973.1;Name=WP_003898973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003898973.1;locus_tag=AL42_RS14170;product=coiled-coil domain-containing protein;protein_id=WP_003898973.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1898652 1901651 . + . ID=gene-AL42_RS14175;Name=AL42_RS14175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14175;old_locus_tag=AL42_01735 NZ_KK316784.1 Protein Homology CDS 1898652 1901651 . + 0 ID=cds-WP_003408360.1;Parent=gene-AL42_RS14175;Dbxref=GenBank:WP_003408360.1;Name=WP_003408360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216199.1;locus_tag=AL42_RS14175;product=acyl-CoA synthetase;protein_id=WP_003408360.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1901644 1901868 . + . ID=gene-AL42_RS14180;Name=AL42_RS14180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14180;old_locus_tag=AL42_01736 NZ_KK316784.1 Protein Homology CDS 1901644 1901868 . + 0 ID=cds-WP_003408362.1;Parent=gene-AL42_RS14180;Dbxref=GenBank:WP_003408362.1;Name=WP_003408362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216200.1;locus_tag=AL42_RS14180;product=Trm112 family protein;protein_id=WP_003408362.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1901834 1902457 . - . ID=gene-AL42_RS14185;Name=AL42_RS14185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14185;old_locus_tag=AL42_01737 NZ_KK316784.1 Protein Homology CDS 1901834 1902457 . - 0 ID=cds-WP_003408366.1;Parent=gene-AL42_RS14185;Dbxref=GenBank:WP_003408366.1;Name=WP_003408366.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216201.1;locus_tag=AL42_RS14185;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003408366.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1902459 1903208 . - . ID=gene-AL42_RS14190;Name=AL42_RS14190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14190;old_locus_tag=AL42_01738 NZ_KK316784.1 Protein Homology CDS 1902459 1903208 . - 0 ID=cds-WP_003912666.1;Parent=gene-AL42_RS14190;Dbxref=GenBank:WP_003912666.1;Name=WP_003912666.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912666.1;locus_tag=AL42_RS14190;product=ABC transporter permease;protein_id=WP_003912666.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1903211 1903978 . - . ID=gene-AL42_RS14195;Name=AL42_RS14195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14195;old_locus_tag=AL42_01739 NZ_KK316784.1 Protein Homology CDS 1903211 1903978 . - 0 ID=cds-WP_003898975.1;Parent=gene-AL42_RS14195;Dbxref=GenBank:WP_003898975.1;Name=WP_003898975.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216203.1;locus_tag=AL42_RS14195;product=ABC transporter ATP-binding protein;protein_id=WP_003898975.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1904037 1904648 . + . ID=gene-AL42_RS14200;Name=mpg;gbkey=Gene;gene=mpg;gene_biotype=protein_coding;locus_tag=AL42_RS14200;old_locus_tag=AL42_01740 NZ_KK316784.1 Protein Homology CDS 1904037 1904648 . + 0 ID=cds-WP_003408373.1;Parent=gene-AL42_RS14200;Dbxref=GenBank:WP_003408373.1;Name=WP_003408373.1;Ontology_term=GO:0006284,GO:0003905;gbkey=CDS;gene=mpg;go_function=alkylbase DNA N-glycosylase activity|0003905||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216204.1;locus_tag=AL42_RS14200;product=DNA-3-methyladenine glycosylase;protein_id=WP_003408373.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1904660 1905934 . + . ID=gene-AL42_RS14205;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=AL42_RS14205;old_locus_tag=AL42_01741 NZ_KK316784.1 Protein Homology CDS 1904660 1905934 . + 0 ID=cds-WP_003408375.1;Parent=gene-AL42_RS14205;Dbxref=GenBank:WP_003408375.1;Name=WP_003408375.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216205.1;locus_tag=AL42_RS14205;product=tyrosine--tRNA ligase;protein_id=WP_003408375.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1906585 1906968 . + . ID=gene-AL42_RS14210;Name=lprJ;gbkey=Gene;gene=lprJ;gene_biotype=protein_coding;locus_tag=AL42_RS14210;old_locus_tag=AL42_01742 NZ_KK316784.1 Protein Homology CDS 1906585 1906968 . + 0 ID=cds-WP_003408378.1;Parent=gene-AL42_RS14210;Dbxref=GenBank:WP_003408378.1;Name=WP_003408378.1;gbkey=CDS;gene=lprJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216206.1;locus_tag=AL42_RS14210;product=lipoprotein LprJ;protein_id=WP_003408378.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1907007 1907759 . + . ID=gene-AL42_RS14215;Name=AL42_RS14215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14215;old_locus_tag=AL42_01743 NZ_KK316784.1 Protein Homology CDS 1907007 1907759 . + 0 ID=cds-WP_003408379.1;Parent=gene-AL42_RS14215;Dbxref=GenBank:WP_003408379.1;Name=WP_003408379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216207.1;locus_tag=AL42_RS14215;product=tetratricopeptide repeat protein;protein_id=WP_003408379.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1907756 1908817 . + . ID=gene-AL42_RS14220;Name=AL42_RS14220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14220;old_locus_tag=AL42_01744 NZ_KK316784.1 Protein Homology CDS 1907756 1908817 . + 0 ID=cds-WP_003408380.1;Parent=gene-AL42_RS14220;Dbxref=GenBank:WP_003408380.1;Name=WP_003408380.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216208.1;locus_tag=AL42_RS14220;product=HAD-IIA family hydrolase;protein_id=WP_003408380.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1908814 1908990 . + . ID=gene-AL42_RS14225;Name=AL42_RS14225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14225;old_locus_tag=AL42_01745 NZ_KK316784.1 Protein Homology CDS 1908814 1908990 . + 0 ID=cds-WP_003408381.1;Parent=gene-AL42_RS14225;Dbxref=GenBank:WP_003408381.1;Name=WP_003408381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216209.1;locus_tag=AL42_RS14225;product=hypothetical protein;protein_id=WP_003408381.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1908998 1909804 . + . ID=gene-AL42_RS14230;Name=tlyA;gbkey=Gene;gene=tlyA;gene_biotype=protein_coding;locus_tag=AL42_RS14230;old_locus_tag=AL42_01746 NZ_KK316784.1 Protein Homology CDS 1908998 1909804 . + 0 ID=cds-WP_003408382.1;Parent=gene-AL42_RS14230;Dbxref=GenBank:WP_003408382.1;Name=WP_003408382.1;gbkey=CDS;gene=tlyA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216210.1;locus_tag=AL42_RS14230;product=16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA;protein_id=WP_003408382.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1909804 1910727 . + . ID=gene-AL42_RS14235;Name=ppnK;gbkey=Gene;gene=ppnK;gene_biotype=protein_coding;locus_tag=AL42_RS14235;old_locus_tag=AL42_01747 NZ_KK316784.1 Protein Homology CDS 1909804 1910727 . + 0 ID=cds-WP_003408383.1;Parent=gene-AL42_RS14235;Dbxref=GenBank:WP_003408383.1;Name=WP_003408383.1;Ontology_term=GO:0006741,GO:0019674,GO:0003951;gbkey=CDS;gene=ppnK;go_function=NAD+ kinase activity|0003951||IEA;go_process=NADP+ biosynthetic process|0006741||IEA,NAD+ metabolic process|0019674||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216211.1;locus_tag=AL42_RS14235;product=NAD kinase;protein_id=WP_003408383.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1910741 1912504 . + . ID=gene-AL42_RS14240;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=AL42_RS14240;old_locus_tag=AL42_01748 NZ_KK316784.1 Protein Homology CDS 1910741 1912504 . + 0 ID=cds-WP_003408385.1;Parent=gene-AL42_RS14240;Dbxref=GenBank:WP_003408385.1;Name=WP_003408385.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216212.1;locus_tag=AL42_RS14240;product=DNA repair protein RecN;protein_id=WP_003408385.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1912600 1913781 . + . ID=gene-AL42_RS14245;Name=steA;gbkey=Gene;gene=steA;gene_biotype=protein_coding;locus_tag=AL42_RS14245;old_locus_tag=AL42_01749 NZ_KK316784.1 Protein Homology CDS 1912600 1913781 . + 0 ID=cds-WP_003408387.1;Parent=gene-AL42_RS14245;Dbxref=GenBank:WP_003408387.1;Name=WP_003408387.1;gbkey=CDS;gene=steA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216213.1;locus_tag=AL42_RS14245;product=putative cytokinetic ring protein SteA;protein_id=WP_003408387.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1913803 1914747 . + . ID=gene-AL42_RS14250;Name=mctB;gbkey=Gene;gene=mctB;gene_biotype=protein_coding;locus_tag=AL42_RS14250;old_locus_tag=AL42_01750 NZ_KK316784.1 Protein Homology CDS 1913803 1914747 . + 0 ID=cds-WP_003408390.1;Parent=gene-AL42_RS14250;Dbxref=GenBank:WP_003408390.1;Name=WP_003408390.1;gbkey=CDS;gene=mctB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216214.1;locus_tag=AL42_RS14250;product=copper transporter MctB;protein_id=WP_003408390.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1914887 1916647 . + . ID=gene-AL42_RS14255;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=AL42_RS14255;old_locus_tag=AL42_01751 NZ_KK316784.1 Protein Homology CDS 1914887 1916647 . + 0 ID=cds-WP_003408396.1;Parent=gene-AL42_RS14255;Dbxref=GenBank:WP_003408396.1;Name=WP_003408396.1;Ontology_term=GO:0006221,GO:0006241,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,CTP biosynthetic process|0006241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216215.1;locus_tag=AL42_RS14255;product=CTP synthase;protein_id=WP_003408396.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1916640 1917263 . + . ID=gene-AL42_RS14260;Name=AL42_RS14260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14260;old_locus_tag=AL42_01752 NZ_KK316784.1 Protein Homology CDS 1916640 1917263 . + 0 ID=cds-WP_003408399.1;Parent=gene-AL42_RS14260;Dbxref=GenBank:WP_003408399.1;Name=WP_003408399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216216.1;locus_tag=AL42_RS14260;product=ADP-ribose diphosphatase;protein_id=WP_003408399.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1917260 1918195 . + . ID=gene-AL42_RS14265;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=AL42_RS14265;old_locus_tag=AL42_01753 NZ_KK316784.1 Protein Homology CDS 1917260 1918195 . + 0 ID=cds-WP_003408401.1;Parent=gene-AL42_RS14265;Dbxref=GenBank:WP_003408401.1;Name=WP_003408401.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216217.1;locus_tag=AL42_RS14265;product=site-specific tyrosine recombinase XerD;protein_id=WP_003408401.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1918269 1919633 . - . ID=gene-AL42_RS14270;Name=AL42_RS14270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14270;old_locus_tag=AL42_01754 NZ_KK316784.1 Protein Homology CDS 1918269 1919633 . - 0 ID=cds-WP_003898977.1;Parent=gene-AL42_RS14270;Dbxref=GenBank:WP_003898977.1;Name=WP_003898977.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216218.1;locus_tag=AL42_RS14270;product=HNH endonuclease signature motif containing protein;protein_id=WP_003898977.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1919895 1920056 . - . ID=gene-AL42_RS27190;Name=AL42_RS27190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27190 NZ_KK316784.1 Protein Homology CDS 1919895 1920056 . - 0 ID=cds-WP_009939761.1;Parent=gene-AL42_RS27190;Dbxref=GenBank:WP_009939761.1;Name=WP_009939761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009939761.1;locus_tag=AL42_RS27190;product=hypothetical protein;protein_id=WP_009939761.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1920189 1920938 . - . ID=gene-AL42_RS14275;Name=AL42_RS14275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14275;old_locus_tag=AL42_01755 NZ_KK316784.1 Protein Homology CDS 1920189 1920938 . - 0 ID=cds-WP_014848103.1;Parent=gene-AL42_RS14275;Dbxref=GenBank:WP_014848103.1;Name=WP_014848103.1;Ontology_term=GO:0032259,GO:0008168,GO:0008171,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,O-methyltransferase activity|0008171||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216219.4;locus_tag=AL42_RS14275;product=O-methyltransferase;protein_id=WP_014848103.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1920844 1922514 . - . ID=gene-AL42_RS14280;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;locus_tag=AL42_RS14280;old_locus_tag=AL42_01756 NZ_KK316784.1 Protein Homology CDS 1920844 1922514 . - 0 ID=cds-WP_003408413.1;Parent=gene-AL42_RS14280;Dbxref=GenBank:WP_003408413.1;Name=WP_003408413.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=cycA;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216220.1;locus_tag=AL42_RS14280;product=amino acid permease;protein_id=WP_003408413.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1922555 1923712 . - . ID=gene-AL42_RS14285;Name=AL42_RS14285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14285;old_locus_tag=AL42_01757 NZ_KK316784.1 Protein Homology CDS 1922555 1923712 . - 0 ID=cds-WP_003408416.1;Parent=gene-AL42_RS14285;Dbxref=GenBank:WP_003408416.1;Name=WP_003408416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177827.1;locus_tag=AL42_RS14285;product=PPE family protein;protein_id=WP_003408416.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1923752 1924786 . - . ID=gene-AL42_RS14290;Name=AL42_RS14290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14290;old_locus_tag=AL42_01758 NZ_KK316784.1 Protein Homology CDS 1923752 1924786 . - 0 ID=cds-WP_003918302.1;Parent=gene-AL42_RS14290;Dbxref=GenBank:WP_003918302.1;Name=WP_003918302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010950601.1;locus_tag=AL42_RS14290;product=PPE family protein;protein_id=WP_003918302.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1925540 1925707 . - . ID=gene-AL42_RS14295;Name=AL42_RS14295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14295;old_locus_tag=AL42_01759 NZ_KK316784.1 Protein Homology CDS 1925540 1925707 . - 0 ID=cds-WP_003408420.1;Parent=gene-AL42_RS14295;Dbxref=GenBank:WP_003408420.1;Name=WP_003408420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177651.1;locus_tag=AL42_RS14295;product=hypothetical protein;protein_id=WP_003408420.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1925940 1927400 . + . ID=gene-AL42_RS14300;Name=AL42_RS14300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14300;old_locus_tag=AL42_01760 NZ_KK316784.1 Protein Homology CDS 1925940 1927400 . + 0 ID=cds-WP_003898981.1;Parent=gene-AL42_RS14300;Dbxref=GenBank:WP_003898981.1;Name=WP_003898981.1;Ontology_term=GO:0015103,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=inorganic anion transmembrane transporter activity|0015103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216223.1;locus_tag=AL42_RS14300;product=SulP family inorganic anion transporter;protein_id=WP_003898981.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1927511 1928374 . + . ID=gene-AL42_RS14305;Name=AL42_RS14305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14305;old_locus_tag=AL42_01761 NZ_KK316784.1 Protein Homology CDS 1927511 1928374 . + 0 ID=cds-WP_003911586.1;Parent=gene-AL42_RS14305;Dbxref=GenBank:WP_003911586.1;Name=WP_003911586.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911586.1;locus_tag=AL42_RS14305;product=ParA family protein;protein_id=WP_003911586.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1928371 1929207 . + . ID=gene-AL42_RS14310;Name=scpA;gbkey=Gene;gene=scpA;gene_biotype=protein_coding;locus_tag=AL42_RS14310;old_locus_tag=AL42_01762 NZ_KK316784.1 Protein Homology CDS 1928371 1929207 . + 0 ID=cds-WP_003408432.1;Parent=gene-AL42_RS14310;Dbxref=GenBank:WP_003408432.1;Name=WP_003408432.1;gbkey=CDS;gene=scpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216225.1;locus_tag=AL42_RS14310;product=segregation/condensation protein A;protein_id=WP_003408432.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1929204 1929899 . + . ID=gene-AL42_RS14315;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=AL42_RS14315;old_locus_tag=AL42_01763 NZ_KK316784.1 Protein Homology CDS 1929204 1929899 . + 0 ID=cds-WP_003408436.1;Parent=gene-AL42_RS14315;Dbxref=GenBank:WP_003408436.1;Name=WP_003408436.1;Ontology_term=GO:0007059,GO:0005515;gbkey=CDS;gene=scpB;go_function=protein binding|0005515||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216226.1;locus_tag=AL42_RS14315;product=SMC-Scp complex subunit ScpB;protein_id=WP_003408436.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1929896 1930660 . + . ID=gene-AL42_RS14320;Name=AL42_RS14320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14320;old_locus_tag=AL42_01764 NZ_KK316784.1 Protein Homology CDS 1929896 1930660 . + 0 ID=cds-WP_003408439.1;Parent=gene-AL42_RS14320;Dbxref=GenBank:WP_003408439.1;Name=WP_003408439.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0140098;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,catalytic activity%2C acting on RNA|0140098||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216227.1;locus_tag=AL42_RS14320;product=pseudouridine synthase;protein_id=WP_003408439.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1930657 1931349 . + . ID=gene-AL42_RS14325;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=AL42_RS14325;old_locus_tag=AL42_01765 NZ_KK316784.1 Protein Homology CDS 1930657 1931349 . + 0 ID=cds-WP_003408441.1;Parent=gene-AL42_RS14325;Dbxref=GenBank:WP_003408441.1;Name=WP_003408441.1;Ontology_term=GO:0015949,GO:0005524;gbkey=CDS;gene=cmk;go_function=ATP binding|0005524||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216228.1;locus_tag=AL42_RS14325;product=(d)CMP kinase;protein_id=WP_003408441.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1931346 1932737 . + . ID=gene-AL42_RS14330;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=AL42_RS14330;old_locus_tag=AL42_01766 NZ_KK316784.1 Protein Homology CDS 1931346 1932737 . + 0 ID=cds-WP_003898984.1;Parent=gene-AL42_RS14330;Dbxref=GenBank:WP_003898984.1;Name=WP_003898984.1;Ontology_term=GO:0005525;gbkey=CDS;gene=der;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216229.1;locus_tag=AL42_RS14330;product=ribosome biogenesis GTPase Der;protein_id=WP_003898984.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1932911 1933723 . + . ID=gene-AL42_RS14335;Name=AL42_RS14335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14335;old_locus_tag=AL42_01767 NZ_KK316784.1 Protein Homology CDS 1932911 1933723 . + 0 ID=cds-WP_003408444.1;Parent=gene-AL42_RS14335;Dbxref=GenBank:WP_003408444.1;Name=WP_003408444.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216230.1;locus_tag=AL42_RS14335;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_003408444.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1933717 1934631 . + . ID=gene-AL42_RS14340;Name=AL42_RS14340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14340;old_locus_tag=AL42_01768 NZ_KK316784.1 Protein Homology CDS 1933717 1934631 . + 0 ID=cds-WP_003898985.1;Parent=gene-AL42_RS14340;Dbxref=GenBank:WP_003898985.1;Name=WP_003898985.1;Ontology_term=GO:0006635,GO:0003857,GO:0070403;gbkey=CDS;go_function=3-hydroxyacyl-CoA dehydrogenase (NAD+) activity|0003857||IEA,NAD+ binding|0070403||IEA;go_process=fatty acid beta-oxidation|0006635||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177829.1;locus_tag=AL42_RS14340;product=3-hydroxyacyl-CoA dehydrogenase family protein;protein_id=WP_003898985.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1934634 1935464 . + . ID=gene-AL42_RS14345;Name=AL42_RS14345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14345;old_locus_tag=AL42_01769 NZ_KK316784.1 Protein Homology CDS 1934634 1935464 . + 0 ID=cds-WP_003408448.1;Parent=gene-AL42_RS14345;Dbxref=GenBank:WP_003408448.1;Name=WP_003408448.1;Ontology_term=GO:0016812,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003907750.1;locus_tag=AL42_RS14345;product=cyclase family protein;protein_id=WP_003408448.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1935464 1935814 . + . ID=gene-AL42_RS14350;Name=AL42_RS14350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14350;old_locus_tag=AL42_01770 NZ_KK316784.1 Protein Homology CDS 1935464 1935814 . + 0 ID=cds-WP_003898986.1;Parent=gene-AL42_RS14350;Dbxref=GenBank:WP_003898986.1;Name=WP_003898986.1;Ontology_term=GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216233.1;locus_tag=AL42_RS14350;product=beta-D-galactosidase;protein_id=WP_003898986.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1935867 1936685 . + . ID=gene-AL42_RS14355;Name=AL42_RS14355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14355;old_locus_tag=AL42_01771 NZ_KK316784.1 Protein Homology CDS 1935867 1936685 . + 0 ID=cds-WP_003408456.1;Parent=gene-AL42_RS14355;Dbxref=GenBank:WP_003408456.1;Name=WP_003408456.1;Ontology_term=GO:0019475,GO:0043720,GO:0046872;gbkey=CDS;go_function=3-keto-5-aminohexanoate cleavage activity|0043720||IEA,metal ion binding|0046872||IEA;go_process=L-lysine catabolic process to acetate|0019475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216234.1;locus_tag=AL42_RS14355;product=beta-keto acid cleavage family enzyme;protein_id=WP_003408456.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1936699 1937478 . + . ID=gene-AL42_RS14360;Name=AL42_RS14360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14360;old_locus_tag=AL42_01772 NZ_KK316784.1 Protein Homology CDS 1936699 1937478 . + 0 ID=cds-WP_003408460.1;Parent=gene-AL42_RS14360;Dbxref=GenBank:WP_003408460.1;Name=WP_003408460.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216235.1;locus_tag=AL42_RS14360;product=IclR family transcriptional regulator;protein_id=WP_003408460.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1937671 1937744 . + . ID=gene-AL42_RS14365;Name=AL42_RS14365;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL42_RS14365;old_locus_tag=AL42_01773 NZ_KK316784.1 tRNAscan-SE tRNA 1937671 1937744 . + . ID=rna-AL42_RS14365;Parent=gene-AL42_RS14365;anticodon=(pos:1937705..1937707);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS14365;product=tRNA-Pro NZ_KK316784.1 tRNAscan-SE exon 1937671 1937744 . + . ID=exon-AL42_RS14365-1;Parent=rna-AL42_RS14365;anticodon=(pos:1937705..1937707);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS14365;product=tRNA-Pro NZ_KK316784.1 RefSeq gene 1938088 1938477 . - . ID=gene-AL42_RS14370;Name=AL42_RS14370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14370;old_locus_tag=AL42_01774 NZ_KK316784.1 Protein Homology CDS 1938088 1938477 . - 0 ID=cds-WP_003408465.1;Parent=gene-AL42_RS14370;Dbxref=GenBank:WP_003408465.1;Name=WP_003408465.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216236.1;locus_tag=AL42_RS14370;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003408465.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1938474 1938701 . - . ID=gene-AL42_RS14375;Name=AL42_RS14375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14375;old_locus_tag=AL42_01775 NZ_KK316784.1 Protein Homology CDS 1938474 1938701 . - 0 ID=cds-WP_003408469.1;Parent=gene-AL42_RS14375;Dbxref=GenBank:WP_003408469.1;Name=WP_003408469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216237.2;locus_tag=AL42_RS14375;product=FitA-like ribbon-helix-helix domain-containing protein;protein_id=WP_003408469.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1938919 1940403 . + . ID=gene-AL42_RS14380;Name=AL42_RS14380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14380;old_locus_tag=AL42_01776 NZ_KK316784.1 Protein Homology CDS 1938919 1940403 . + 0 ID=cds-WP_003408473.1;Parent=gene-AL42_RS14380;Dbxref=GenBank:WP_003408473.1;Name=WP_003408473.1;Ontology_term=GO:0005524,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216238.1;locus_tag=AL42_RS14380;product=biotin carboxylase;protein_id=WP_003408473.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1940400 1941647 . + . ID=gene-AL42_RS14385;Name=AL42_RS14385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14385;old_locus_tag=AL42_01777 NZ_KK316784.1 Protein Homology CDS 1940400 1941647 . + 0 ID=cds-WP_003408476.1;Parent=gene-AL42_RS14385;Dbxref=GenBank:WP_003408476.1;Name=WP_003408476.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216239.1;locus_tag=AL42_RS14385;product=serine hydrolase domain-containing protein;protein_id=WP_003408476.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1941690 1942109 . - . ID=gene-AL42_RS14390;Name=AL42_RS14390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14390;old_locus_tag=AL42_01778 NZ_KK316784.1 Protein Homology CDS 1941690 1942109 . - 0 ID=cds-WP_003408483.1;Parent=gene-AL42_RS14390;Dbxref=GenBank:WP_003408483.1;Name=WP_003408483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216240.1;locus_tag=AL42_RS14390;product=hypothetical protein;protein_id=WP_003408483.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1942099 1942809 . - . ID=gene-AL42_RS14395;Name=AL42_RS14395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14395;old_locus_tag=AL42_01779 NZ_KK316784.1 Protein Homology CDS 1942099 1942809 . - 0 ID=cds-WP_003408486.1;Parent=gene-AL42_RS14395;Dbxref=GenBank:WP_003408486.1;Name=WP_003408486.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216241.1;locus_tag=AL42_RS14395;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_003408486.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1942910 1944295 . + . ID=gene-AL42_RS14400;Name=AL42_RS14400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14400;old_locus_tag=AL42_01780 NZ_KK316784.1 Protein Homology CDS 1942910 1944295 . + 0 ID=cds-WP_003900395.1;Parent=gene-AL42_RS14400;Dbxref=GenBank:WP_003900395.1;Name=WP_003900395.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216242.1;locus_tag=AL42_RS14400;product=FAD-binding oxidoreductase;protein_id=WP_003900395.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1944328 1944897 . + . ID=gene-AL42_RS14405;Name=AL42_RS14405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14405;old_locus_tag=AL42_01781 NZ_KK316784.1 Protein Homology CDS 1944328 1944897 . + 0 ID=cds-WP_003408493.1;Parent=gene-AL42_RS14405;Dbxref=GenBank:WP_003408493.1;Name=WP_003408493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216243.1;locus_tag=AL42_RS14405;product=TIGR03086 family metal-binding protein;protein_id=WP_003408493.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1944922 1945692 . - . ID=gene-AL42_RS14410;Name=AL42_RS14410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14410;old_locus_tag=AL42_01782 NZ_KK316784.1 Protein Homology CDS 1944922 1945692 . - 0 ID=cds-WP_003408495.1;Parent=gene-AL42_RS14410;Dbxref=GenBank:WP_003408495.1;Name=WP_003408495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216244.1;locus_tag=AL42_RS14410;product=VldE C-terminal domain-containing protein;protein_id=WP_003408495.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1945689 1946627 . - . ID=gene-AL42_RS14415;Name=AL42_RS14415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14415;old_locus_tag=AL42_01783 NZ_KK316784.1 Protein Homology CDS 1945689 1946627 . - 0 ID=cds-WP_003408497.1;Parent=gene-AL42_RS14415;Dbxref=GenBank:WP_003408497.1;Name=WP_003408497.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216245.1;locus_tag=AL42_RS14415;product=class I SAM-dependent methyltransferase;protein_id=WP_003408497.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1946807 1948338 . - . ID=gene-AL42_RS14420;Name=AL42_RS14420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS14420;old_locus_tag=AL42_01784;pseudo=true NZ_KK316784.1 Protein Homology CDS 1946807 1948338 . - 0 ID=cds-AL42_RS14420;Parent=gene-AL42_RS14420;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216246.1;locus_tag=AL42_RS14420;product=serine hydrolase domain-containing protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1948488 1948617 . + . ID=gene-AL42_RS28135;Name=AL42_RS28135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS28135;partial=true;pseudo=true;start_range=.,1948488 NZ_KK316784.1 Protein Homology CDS 1948488 1948617 . + 0 ID=cds-AL42_RS28135;Parent=gene-AL42_RS28135;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178014.1;locus_tag=AL42_RS28135;partial=true;product=galactofuranosyl transferase;pseudo=true;start_range=.,1948488;transl_table=11 NZ_KK316784.1 RefSeq gene 1948770 1950326 . + . ID=gene-AL42_RS14425;Name=AL42_RS14425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14425;old_locus_tag=AL42_01785 NZ_KK316784.1 Protein Homology CDS 1948770 1950326 . + 0 ID=cds-WP_003898989.1;Parent=gene-AL42_RS14425;Dbxref=GenBank:WP_003898989.1;Name=WP_003898989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_214748.2;locus_tag=AL42_RS14425;product=succinic semialdehyde dehydrogenase;protein_id=WP_003898989.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1950336 1950884 . - . ID=gene-AL42_RS14430;Name=AL42_RS14430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14430;old_locus_tag=AL42_01786 NZ_KK316784.1 Protein Homology CDS 1950336 1950884 . - 0 ID=cds-WP_003408503.1;Parent=gene-AL42_RS14430;Dbxref=GenBank:WP_003408503.1;Name=WP_003408503.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216248.1;locus_tag=AL42_RS14430;product=thioredoxin family protein;protein_id=WP_003408503.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1950948 1951580 . - . ID=gene-AL42_RS14435;Name=AL42_RS14435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14435;old_locus_tag=AL42_01787 NZ_KK316784.1 Protein Homology CDS 1950948 1951580 . - 0 ID=cds-WP_003408506.1;Parent=gene-AL42_RS14435;Dbxref=GenBank:WP_003408506.1;Name=WP_003408506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216249.1;locus_tag=AL42_RS14435;product=Rv1733c family protein;protein_id=WP_003408506.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1951867 1952109 . - . ID=gene-AL42_RS14440;Name=AL42_RS14440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14440;old_locus_tag=AL42_01788 NZ_KK316784.1 Protein Homology CDS 1951867 1952109 . - 0 ID=cds-WP_003408509.1;Parent=gene-AL42_RS14440;Dbxref=GenBank:WP_003408509.1;Name=WP_003408509.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014000907.1;locus_tag=AL42_RS14440;product=2-oxo acid dehydrogenase subunit E2;protein_id=WP_003408509.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1952384 1952977 . - . ID=gene-AL42_RS14445;Name=AL42_RS14445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14445;old_locus_tag=AL42_01789 NZ_KK316784.1 Protein Homology CDS 1952384 1952977 . - 0 ID=cds-WP_003898991.1;Parent=gene-AL42_RS14445;Dbxref=GenBank:WP_003898991.1;Name=WP_003898991.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015552.6;locus_tag=AL42_RS14445;product=tellurite resistance/C4-dicarboxylate transporter family protein;protein_id=WP_003898991.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1952980 1953222 . - . ID=gene-AL42_RS14450;Name=AL42_RS14450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14450;old_locus_tag=AL42_01790 NZ_KK316784.1 Protein Homology CDS 1952980 1953222 . - 0 ID=cds-WP_003408513.1;Parent=gene-AL42_RS14450;Dbxref=GenBank:WP_003408513.1;Name=WP_003408513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030033.1;locus_tag=AL42_RS14450;product=hypothetical protein;protein_id=WP_003408513.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1953321 1955279 . - . ID=gene-AL42_RS25865;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=AL42_RS25865;old_locus_tag=AL42_01791 NZ_KK316784.1 Protein Homology CDS 1953321 1955279 . - 0 ID=cds-WP_003901238.1;Parent=gene-AL42_RS25865;Dbxref=GenBank:WP_003901238.1;Name=WP_003901238.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216252.1;locus_tag=AL42_RS25865;product=respiratory nitrate reductase subunit gamma;protein_id=WP_003901238.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1955276 1956463 . - . ID=gene-AL42_RS14455;Name=narK;gbkey=Gene;gene=narK;gene_biotype=protein_coding;locus_tag=AL42_RS14455;old_locus_tag=AL42_01792 NZ_KK316784.1 Protein Homology CDS 1955276 1956463 . - 0 ID=cds-WP_003898992.1;Parent=gene-AL42_RS14455;Dbxref=GenBank:WP_003898992.1;Name=WP_003898992.1;gbkey=CDS;gene=narK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216253.1;locus_tag=AL42_RS14455;product=nitrate transporter NarK;protein_id=WP_003898992.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1956750 1957034 . + . ID=gene-AL42_RS14460;Name=AL42_RS14460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14460;old_locus_tag=AL42_01793 NZ_KK316784.1 Protein Homology CDS 1956750 1957034 . + 0 ID=cds-WP_003408522.1;Parent=gene-AL42_RS14460;Dbxref=GenBank:WP_003408522.1;Name=WP_003408522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216254.1;locus_tag=AL42_RS14460;product=DUF1876 domain-containing protein;protein_id=WP_003408522.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1957048 1958730 . - . ID=gene-AL42_RS14465;Name=AL42_RS14465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14465;old_locus_tag=AL42_01794 NZ_KK316784.1 Protein Homology CDS 1957048 1958730 . - 0 ID=cds-WP_003901239.1;Parent=gene-AL42_RS14465;Dbxref=GenBank:WP_003901239.1;Name=WP_003901239.1;Ontology_term=GO:0015103,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=inorganic anion transmembrane transporter activity|0015103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216255.1;locus_tag=AL42_RS14465;product=SulP family inorganic anion transporter;protein_id=WP_003901239.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1958798 1959010 . + . ID=gene-AL42_RS14470;Name=AL42_RS14470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14470;old_locus_tag=AL42_01795 NZ_KK316784.1 Protein Homology CDS 1958798 1959010 . + 0 ID=cds-WP_003408528.1;Parent=gene-AL42_RS14470;Dbxref=GenBank:WP_003408528.1;Name=WP_003408528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216256.1;locus_tag=AL42_RS14470;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_003408528.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1959010 1959258 . + . ID=gene-AL42_RS14475;Name=AL42_RS14475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14475;old_locus_tag=AL42_01796 NZ_KK316784.1 Protein Homology CDS 1959010 1959258 . + 0 ID=cds-WP_003898996.1;Parent=gene-AL42_RS14475;Dbxref=GenBank:WP_003898996.1;Name=WP_003898996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216257.1;locus_tag=AL42_RS14475;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003898996.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1959266 1960003 . + . ID=gene-AL42_RS14480;Name=AL42_RS14480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14480;old_locus_tag=AL42_01797 NZ_KK316784.1 Protein Homology CDS 1959266 1960003 . + 0 ID=cds-WP_003898997.1;Parent=gene-AL42_RS14480;Dbxref=GenBank:WP_003898997.1;Name=WP_003898997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216258.1;locus_tag=AL42_RS14480;product=hypothetical protein;protein_id=WP_003898997.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1960097 1961797 . + . ID=gene-AL42_RS14485;Name=pknE;gbkey=Gene;gene=pknE;gene_biotype=protein_coding;locus_tag=AL42_RS14485;old_locus_tag=AL42_01798 NZ_KK316784.1 Protein Homology CDS 1960097 1961797 . + 0 ID=cds-WP_003898998.1;Parent=gene-AL42_RS14485;Dbxref=GenBank:WP_003898998.1;Name=WP_003898998.1;gbkey=CDS;gene=pknE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216259.1;locus_tag=AL42_RS14485;product=serine/threonine protein kinase PknE;protein_id=WP_003898998.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1962082 1962483 . - . ID=gene-AL42_RS14490;Name=AL42_RS14490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14490;old_locus_tag=AL42_01799 NZ_KK316784.1 Protein Homology CDS 1962082 1962483 . - 0 ID=cds-WP_003408538.1;Parent=gene-AL42_RS14490;Dbxref=GenBank:WP_003408538.1;Name=WP_003408538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216260.1;locus_tag=AL42_RS14490;product=hypothetical protein;protein_id=WP_003408538.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1962473 1963084 . - . ID=gene-AL42_RS14495;Name=idi;gbkey=Gene;gene=idi;gene_biotype=protein_coding;locus_tag=AL42_RS14495;old_locus_tag=AL42_01800 NZ_KK316784.1 Protein Homology CDS 1962473 1963084 . - 0 ID=cds-WP_003898999.1;Parent=gene-AL42_RS14495;Dbxref=GenBank:WP_003898999.1;Name=WP_003898999.1;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=idi;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216261.1;locus_tag=AL42_RS14495;product=isopentenyl-diphosphate Delta-isomerase;protein_id=WP_003898999.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1963231 1964661 . + . ID=gene-AL42_RS14500;Name=pknF;gbkey=Gene;gene=pknF;gene_biotype=protein_coding;locus_tag=AL42_RS14500;old_locus_tag=AL42_01801 NZ_KK316784.1 Protein Homology CDS 1963231 1964661 . + 0 ID=cds-WP_003899000.1;Parent=gene-AL42_RS14500;Dbxref=GenBank:WP_003899000.1;Name=WP_003899000.1;gbkey=CDS;gene=pknF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216262.1;locus_tag=AL42_RS14500;product=serine/threonine protein kinase PknF;protein_id=WP_003899000.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1964723 1967320 . + . ID=gene-AL42_RS14505;Name=AL42_RS14505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14505;old_locus_tag=AL42_01802 NZ_KK316784.1 Protein Homology CDS 1964723 1967320 . + 0 ID=cds-WP_003408545.1;Parent=gene-AL42_RS14505;Dbxref=GenBank:WP_003408545.1;Name=WP_003408545.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216263.1;locus_tag=AL42_RS14505;product=ATP transporter ATP-binding protein/permease;protein_id=WP_003408545.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1967753 1968424 . + . ID=gene-AL42_RS14510;Name=AL42_RS14510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14510;old_locus_tag=AL42_01803 NZ_KK316784.1 Protein Homology CDS 1967753 1968424 . + 0 ID=cds-WP_003899001.1;Parent=gene-AL42_RS14510;Dbxref=GenBank:WP_003899001.1;Name=WP_003899001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015303192.1;locus_tag=AL42_RS14510;product=hypothetical protein;protein_id=WP_003899001.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1968421 1968978 . - . ID=gene-AL42_RS14515;Name=AL42_RS14515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14515;old_locus_tag=AL42_01804 NZ_KK316784.1 Protein Homology CDS 1968421 1968978 . - 0 ID=cds-WP_003408556.1;Parent=gene-AL42_RS14515;Dbxref=GenBank:WP_003408556.1;Name=WP_003408556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216265.1;locus_tag=AL42_RS14515;product=DUF6790 family protein;protein_id=WP_003408556.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1969062 1970660 . - . ID=gene-AL42_RS14520;Name=fadD1;gbkey=Gene;gene=fadD1;gene_biotype=protein_coding;locus_tag=AL42_RS14520;old_locus_tag=AL42_01805 NZ_KK316784.1 Protein Homology CDS 1969062 1970660 . - 0 ID=cds-WP_003408558.1;Parent=gene-AL42_RS14520;Dbxref=GenBank:WP_003408558.1;Name=WP_003408558.1;gbkey=CDS;gene=fadD1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216266.1;locus_tag=AL42_RS14520;product=fatty-acid--CoA ligase FadD1;protein_id=WP_003408558.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1970858 1972096 . + . ID=gene-AL42_RS14525;Name=AL42_RS14525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14525;old_locus_tag=AL42_01806 NZ_KK316784.1 Protein Homology CDS 1970858 1972096 . + 0 ID=cds-WP_003911631.1;Parent=gene-AL42_RS14525;Dbxref=GenBank:WP_003911631.1;Name=WP_003911631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911631.1;locus_tag=AL42_RS14525;product=FAD-dependent oxidoreductase;protein_id=WP_003911631.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1972205 1972640 . + . ID=gene-AL42_RS27615;Name=AL42_RS27615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS27615;old_locus_tag=AL42_01807;partial=true;pseudo=true;start_range=.,1972205 NZ_KK316784.1 Protein Homology CDS 1972205 1972640 . + 0 ID=cds-AL42_RS27615;Parent=gene-AL42_RS27615;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015355438.1;locus_tag=AL42_RS27615;partial=true;product=Gfo/Idh/MocA family protein;pseudo=true;start_range=.,1972205;transl_table=11 NZ_KK316784.1 RefSeq gene 1972707 1975559 . - . ID=gene-AL42_RS14535;Name=AL42_RS14535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14535;old_locus_tag=AL42_01808 NZ_KK316784.1 Protein Homology CDS 1972707 1975559 . - 0 ID=cds-WP_031647501.1;Parent=gene-AL42_RS14535;Dbxref=GenBank:WP_031647501.1;Name=WP_031647501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177830.1;locus_tag=AL42_RS14535;product=PPE family protein;protein_id=WP_031647501.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1975763 1977412 . - . ID=gene-AL42_RS14540;Name=AL42_RS14540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14540;old_locus_tag=AL42_01809 NZ_KK316784.1 Protein Homology CDS 1975763 1977412 . - 0 ID=cds-WP_072460321.1;Parent=gene-AL42_RS14540;Dbxref=GenBank:WP_072460321.1;Name=WP_072460321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003902203.1;locus_tag=AL42_RS14540;product=DUF4185 domain-containing protein;protein_id=WP_072460321.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1977465 1978726 . - . ID=gene-AL42_RS14545;Name=AL42_RS14545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14545;old_locus_tag=AL42_01810 NZ_KK316784.1 Protein Homology CDS 1978438 1978726 . - 0 ID=cds-WP_087902221.1-5;Parent=gene-AL42_RS14545;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL42_RS14545;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316784.1 Protein Homology CDS 1977465 1978438 . - 2 ID=cds-WP_087902221.1-5;Parent=gene-AL42_RS14545;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL42_RS14545;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1979297 1979536 . - . ID=gene-AL42_RS27960;Name=AL42_RS27960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27960;old_locus_tag=AL42_01812 NZ_KK316784.1 Protein Homology CDS 1979297 1979536 . - 0 ID=cds-WP_077365248.1;Parent=gene-AL42_RS27960;Dbxref=GenBank:WP_077365248.1;Name=WP_077365248.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012870.6;locus_tag=AL42_RS27960;product=DDE-type integrase/transposase/recombinase;protein_id=WP_077365248.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1979570 1979689 . - . ID=gene-AL42_RS27965;Name=AL42_RS27965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27965 NZ_KK316784.1 Protein Homology CDS 1979570 1979689 . - 0 ID=cds-WP_021083427.1;Parent=gene-AL42_RS27965;Dbxref=GenBank:WP_021083427.1;Name=WP_021083427.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024673.6;locus_tag=AL42_RS27965;product=hypothetical protein;protein_id=WP_021083427.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1979892 1980161 . + . ID=gene-AL42_RS14560;Name=AL42_RS14560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14560;old_locus_tag=AL42_01813 NZ_KK316784.1 Protein Homology CDS 1979892 1980161 . + 0 ID=cds-WP_003899012.1;Parent=gene-AL42_RS14560;Dbxref=GenBank:WP_003899012.1;Name=WP_003899012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216282.2;locus_tag=AL42_RS14560;product=metal-sensitive transcriptional regulator;protein_id=WP_003899012.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1980229 1980588 . + . ID=gene-AL42_RS14565;Name=AL42_RS14565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14565;old_locus_tag=AL42_01814 NZ_KK316784.1 Protein Homology CDS 1980229 1980588 . + 0 ID=cds-WP_003408743.1;Parent=gene-AL42_RS14565;Dbxref=GenBank:WP_003408743.1;Name=WP_003408743.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216283.1;locus_tag=AL42_RS14565;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_003408743.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1980769 1982625 . + . ID=gene-AL42_RS14570;Name=AL42_RS14570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14570;old_locus_tag=AL42_01815 NZ_KK316784.1 Protein Homology CDS 1980769 1982625 . + 0 ID=cds-WP_003905649.1;Parent=gene-AL42_RS14570;Dbxref=GenBank:WP_003905649.1;Name=WP_003905649.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177832.1;locus_tag=AL42_RS14570;product=PE family protein;protein_id=WP_003905649.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1982781 1984025 . + . ID=gene-AL42_RS14575;Name=AL42_RS14575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14575;old_locus_tag=AL42_01816 NZ_KK316784.1 Protein Homology CDS 1982781 1984025 . + 0 ID=cds-WP_003902200.1;Parent=gene-AL42_RS14575;Dbxref=GenBank:WP_003902200.1;Name=WP_003902200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216285.1;locus_tag=AL42_RS14575;product=amino acid deaminase/aldolase;protein_id=WP_003902200.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1984114 1985319 . + . ID=gene-AL42_RS14580;Name=AL42_RS14580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14580;old_locus_tag=AL42_01817 NZ_KK316784.1 Protein Homology CDS 1984114 1985319 . + 0 ID=cds-WP_003911655.1;Parent=gene-AL42_RS14580;Dbxref=GenBank:WP_003911655.1;Name=WP_003911655.1;Ontology_term=GO:0006508,GO:0008235,GO:0008237,GO:0008270;gbkey=CDS;go_function=metalloexopeptidase activity|0008235||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911655.1;locus_tag=AL42_RS14580;product=M28 family metallopeptidase;protein_id=WP_003911655.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1985316 1986602 . + . ID=gene-AL42_RS14585;Name=AL42_RS14585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14585;old_locus_tag=AL42_01818 NZ_KK316784.1 Protein Homology CDS 1985316 1986602 . + 0 ID=cds-WP_003408749.1;Parent=gene-AL42_RS14585;Dbxref=GenBank:WP_003408749.1;Name=WP_003408749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216287.1;locus_tag=AL42_RS14585;product=L-gulono-1%2C4-lactone dehydrogenase;protein_id=WP_003408749.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1986791 1987102 . + . ID=gene-AL42_RS14590;Name=AL42_RS14590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14590;old_locus_tag=AL42_01819 NZ_KK316784.1 Protein Homology CDS 1986791 1987102 . + 0 ID=cds-WP_003408753.1;Parent=gene-AL42_RS14590;Dbxref=GenBank:WP_003408753.1;Name=WP_003408753.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216288.1;locus_tag=AL42_RS14590;product=ANTAR domain-containing protein;protein_id=WP_003408753.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1987175 1987921 . - . ID=gene-AL42_RS14595;Name=AL42_RS14595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14595;old_locus_tag=AL42_01820 NZ_KK316784.1 Protein Homology CDS 1987175 1987921 . - 0 ID=cds-WP_031721811.1;Parent=gene-AL42_RS14595;Dbxref=GenBank:WP_031721811.1;Name=WP_031721811.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216289.1;locus_tag=AL42_RS14595;product=IclR family transcriptional regulator;protein_id=WP_031721811.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1987987 1989327 . + . ID=gene-AL42_RS14600;Name=AL42_RS14600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14600;old_locus_tag=AL42_01821 NZ_KK316784.1 Protein Homology CDS 1987987 1989327 . + 0 ID=cds-WP_003899017.1;Parent=gene-AL42_RS14600;Dbxref=GenBank:WP_003899017.1;Name=WP_003899017.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216290.1;locus_tag=AL42_RS14600;product=FAD-binding oxidoreductase;protein_id=WP_003899017.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 1989327 1990144 . + . ID=gene-AL42_RS14605;Name=AL42_RS14605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS14605;old_locus_tag=AL42_01822;pseudo=true NZ_KK316784.1 Protein Homology CDS 1989327 1990144 . + 0 ID=cds-AL42_RS14605;Parent=gene-AL42_RS14605;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216291.1;locus_tag=AL42_RS14605;product=DAPG hydrolase family protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 1990149 1990709 . - . ID=gene-AL42_RS14610;Name=AL42_RS14610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14610;old_locus_tag=AL42_01823 NZ_KK316784.1 Protein Homology CDS 1990149 1990709 . - 0 ID=cds-WP_003899018.1;Parent=gene-AL42_RS14610;Dbxref=GenBank:WP_003899018.1;Name=WP_003899018.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216292.1;locus_tag=AL42_RS14610;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003899018.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1990900 1992114 . + . ID=gene-AL42_RS14615;Name=cyp144;gbkey=Gene;gene=cyp144;gene_biotype=protein_coding;locus_tag=AL42_RS14615;old_locus_tag=AL42_01824 NZ_KK316784.1 Protein Homology CDS 1990900 1992114 . + 0 ID=cds-WP_003911660.1;Parent=gene-AL42_RS14615;Dbxref=GenBank:WP_003911660.1;Name=WP_003911660.1;gbkey=CDS;gene=cyp144;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911660.1;locus_tag=AL42_RS14615;product=cytochrome P450 Cyp144;protein_id=WP_003911660.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1992235 1992684 . - . ID=gene-AL42_RS14620;Name=AL42_RS14620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14620;old_locus_tag=AL42_01825 NZ_KK316784.1 Protein Homology CDS 1992235 1992684 . - 0 ID=cds-WP_003408775.1;Parent=gene-AL42_RS14620;Dbxref=GenBank:WP_003408775.1;Name=WP_003408775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216294.1;locus_tag=AL42_RS14620;product=DUF6941 family protein;protein_id=WP_003408775.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1992840 1994633 . - . ID=gene-AL42_RS14625;Name=AL42_RS14625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14625;old_locus_tag=AL42_01826 NZ_KK316784.1 Protein Homology CDS 1992840 1994633 . - 0 ID=cds-WP_003408781.1;Parent=gene-AL42_RS14625;Dbxref=GenBank:WP_003408781.1;Name=WP_003408781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216295.1;locus_tag=AL42_RS14625;product=DUF4407 domain-containing protein;protein_id=WP_003408781.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1994853 1995416 . + . ID=gene-AL42_RS14630;Name=AL42_RS14630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14630;old_locus_tag=AL42_01827 NZ_KK316784.1 Protein Homology CDS 1994853 1995416 . + 0 ID=cds-WP_003408792.1;Parent=gene-AL42_RS14630;Dbxref=GenBank:WP_003408792.1;Name=WP_003408792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216296.1;locus_tag=AL42_RS14630;product=hypothetical protein;protein_id=WP_003408792.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1995456 1997630 . - . ID=gene-AL42_RS14635;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=AL42_RS14635;old_locus_tag=AL42_01828 NZ_KK316784.1 Protein Homology CDS 1995456 1997630 . - 0 ID=cds-WP_003408795.1;Parent=gene-AL42_RS14635;Dbxref=GenBank:WP_003408795.1;Name=WP_003408795.1;Ontology_term=GO:0005980,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216297.1;locus_tag=AL42_RS14635;product=4-alpha-glucanotransferase;protein_id=WP_003408795.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1997894 1999414 . + . ID=gene-AL42_RS14640;Name=eccB5;gbkey=Gene;gene=eccB5;gene_biotype=protein_coding;locus_tag=AL42_RS14640;old_locus_tag=AL42_01829 NZ_KK316784.1 Protein Homology CDS 1997894 1999414 . + 0 ID=cds-WP_003899021.1;Parent=gene-AL42_RS14640;Dbxref=GenBank:WP_003899021.1;Name=WP_003899021.1;gbkey=CDS;gene=eccB5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216298.1;locus_tag=AL42_RS14640;product=type VII secretion system ESX-5 subunit EccB5;protein_id=WP_003899021.1;transl_table=11 NZ_KK316784.1 RefSeq gene 1999411 2003586 . + . ID=gene-AL42_RS14645;Name=eccC5;gbkey=Gene;gene=eccC5;gene_biotype=protein_coding;locus_tag=AL42_RS14645;old_locus_tag=AL42_01830 NZ_KK316784.1 Protein Homology CDS 1999411 2003586 . + 0 ID=cds-WP_003408799.1;Parent=gene-AL42_RS14645;Dbxref=GenBank:WP_003408799.1;Name=WP_003408799.1;gbkey=CDS;gene=eccC5;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007410461.1;locus_tag=AL42_RS14645;product=type VII secretion system ESX-5 FtsK/SpoIIIE family ATPase EccC5;protein_id=WP_003408799.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2003601 2004782 . - . ID=gene-AL42_RS14650;Name=AL42_RS14650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14650;old_locus_tag=AL42_01831 NZ_KK316784.1 Protein Homology CDS 2003601 2004782 . - 0 ID=cds-WP_003901253.1;Parent=gene-AL42_RS14650;Dbxref=GenBank:WP_003901253.1;Name=WP_003901253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216301.1;locus_tag=AL42_RS14650;product=cytochrome P450;protein_id=WP_003901253.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2004982 2005185 . + . ID=gene-AL42_RS14655;Name=AL42_RS14655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14655;old_locus_tag=AL42_01832 NZ_KK316784.1 Protein Homology CDS 2004982 2005185 . + 0 ID=cds-WP_003408803.1;Parent=gene-AL42_RS14655;Dbxref=GenBank:WP_003408803.1;Name=WP_003408803.1;Ontology_term=GO:0005506,GO:0009055,GO:0051536;gbkey=CDS;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216302.1;locus_tag=AL42_RS14655;product=ferredoxin;protein_id=WP_003408803.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2005455 2006486 . + . ID=gene-AL42_RS14660;Name=AL42_RS14660;end_range=2006486,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14660;old_locus_tag=AL42_01833;partial=true NZ_KK316784.1 Protein Homology CDS 2005455 2006486 . + 0 ID=cds-WP_031721916.1;Parent=gene-AL42_RS14660;Dbxref=GenBank:WP_031721916.1;Name=WP_031721916.1;end_range=2006486,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177833.1;locus_tag=AL42_RS14660;partial=true;product=type VII secretion system ESX-5 target PPE25;protein_id=WP_031721916.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2006587 2007452 . + . ID=gene-AL42_RS0104825;Name=AL42_RS0104825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0104825;partial=true;start_range=.,2006587 NZ_KK316784.1 Protein Homology CDS 2006587 2007452 . + 2 ID=cds-WP_031721918.1;Parent=gene-AL42_RS0104825;Dbxref=GenBank:WP_031721918.1;Name=WP_031721918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177833.1;locus_tag=AL42_RS0104825;partial=true;product=type VII secretion system ESX-5 target PPE25;protein_id=WP_031721918.1;start_range=.,2006587;transl_table=11 NZ_KK316784.1 RefSeq gene 2007531 2007830 . + . ID=gene-AL42_RS14665;Name=AL42_RS14665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14665;old_locus_tag=AL42_01834 NZ_KK316784.1 Protein Homology CDS 2007531 2007830 . + 0 ID=cds-WP_003408976.1;Parent=gene-AL42_RS14665;Dbxref=GenBank:WP_003408976.1;Name=WP_003408976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177834.1;locus_tag=AL42_RS14665;product=type VII secretion system ESX-5 target PE18;protein_id=WP_003408976.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2007844 2009025 . + . ID=gene-AL42_RS14670;Name=AL42_RS14670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14670;old_locus_tag=AL42_01835 NZ_KK316784.1 Protein Homology CDS 2007844 2009025 . + 0 ID=cds-WP_003408979.1;Parent=gene-AL42_RS14670;Dbxref=GenBank:WP_003408979.1;Name=WP_003408979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177835.1;locus_tag=AL42_RS14670;product=type VII secretion system ESX-5 target PPE26;protein_id=WP_003408979.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2009479 2010531 . + . ID=gene-AL42_RS14675;Name=AL42_RS14675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14675;old_locus_tag=AL42_01836 NZ_KK316784.1 Protein Homology CDS 2009479 2010531 . + 0 ID=cds-WP_003408805.1;Parent=gene-AL42_RS14675;Dbxref=GenBank:WP_003408805.1;Name=WP_003408805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177836.1;locus_tag=AL42_RS14675;product=type VII secretion system ESX-5 target PPE27;protein_id=WP_003408805.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2010958 2011257 . + . ID=gene-AL42_RS14680;Name=AL42_RS14680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14680;old_locus_tag=AL42_01837 NZ_KK316784.1 Protein Homology CDS 2010958 2011257 . + 0 ID=cds-WP_003408807.1;Parent=gene-AL42_RS14680;Dbxref=GenBank:WP_003408807.1;Name=WP_003408807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177837.1;locus_tag=AL42_RS14680;product=type VII secretion system ESX-5 target PE19;protein_id=WP_003408807.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2011401 2011697 . + . ID=gene-AL42_RS25890;Name=esxJ;gbkey=Gene;gene=esxJ;gene_biotype=pseudogene;locus_tag=AL42_RS25890;pseudo=true NZ_KK316784.1 Protein Homology CDS 2011401 2011697 . + 0 ID=cds-AL42_RS25890;Parent=gene-AL42_RS25890;Note=internal stop;gbkey=CDS;gene=esxJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215554.1;locus_tag=AL42_RS25890;product=type VII secretion system ESX-5 protein EsxJ;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 2011748 2012032 . + . ID=gene-AL42_RS14690;Name=esxN;gbkey=Gene;gene=esxN;gene_biotype=protein_coding;locus_tag=AL42_RS14690;old_locus_tag=AL42_01840 NZ_KK316784.1 Protein Homology CDS 2011748 2012032 . + 0 ID=cds-WP_003408840.1;Parent=gene-AL42_RS14690;Dbxref=GenBank:WP_003408840.1;Name=WP_003408840.1;gbkey=CDS;gene=esxN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177838.1;locus_tag=AL42_RS14690;product=effector;protein_id=WP_003408840.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2012120 2013022 . + . ID=gene-AL42_RS14695;Name=AL42_RS14695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14695;old_locus_tag=AL42_01841 NZ_KK316784.1 Protein Homology CDS 2012120 2013022 . + 0 ID=cds-WP_003408846.1;Parent=gene-AL42_RS14695;Dbxref=GenBank:WP_003408846.1;Name=WP_003408846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216310.1;locus_tag=AL42_RS14695;product=ESX secretion-associated protein EspG;protein_id=WP_003408846.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2013294 2014805 . + . ID=gene-AL42_RS14700;Name=eccD5;gbkey=Gene;gene=eccD5;gene_biotype=protein_coding;locus_tag=AL42_RS14700;old_locus_tag=AL42_01842 NZ_KK316784.1 Protein Homology CDS 2013294 2014805 . + 0 ID=cds-WP_003900411.1;Parent=gene-AL42_RS14700;Dbxref=GenBank:WP_003900411.1;Name=WP_003900411.1;gbkey=CDS;gene=eccD5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216311.1;locus_tag=AL42_RS14700;product=type VII secretion system ESX-5 subunit EccD5;protein_id=WP_003900411.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2014783 2016540 . + . ID=gene-AL42_RS14705;Name=mycP5;gbkey=Gene;gene=mycP5;gene_biotype=protein_coding;locus_tag=AL42_RS14705;old_locus_tag=AL42_01843 NZ_KK316784.1 Protein Homology CDS 2014783 2016540 . + 0 ID=cds-WP_003408854.1;Parent=gene-AL42_RS14705;Dbxref=GenBank:WP_003408854.1;Name=WP_003408854.1;gbkey=CDS;gene=mycP5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216312.1;locus_tag=AL42_RS14705;product=type VII secretion system ESX-5 serine protease mycosin MycP5;protein_id=WP_003408854.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2016537 2017757 . + . ID=gene-AL42_RS14710;Name=eccE5;gbkey=Gene;gene=eccE5;gene_biotype=protein_coding;locus_tag=AL42_RS14710;old_locus_tag=AL42_01844 NZ_KK316784.1 Protein Homology CDS 2016537 2017757 . + 0 ID=cds-WP_003408859.1;Parent=gene-AL42_RS14710;Dbxref=GenBank:WP_003408859.1;Name=WP_003408859.1;gbkey=CDS;gene=eccE5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216313.1;locus_tag=AL42_RS14710;product=type VII secretion system ESX-5 subunit EccE5;protein_id=WP_003408859.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2017754 2019586 . + . ID=gene-AL42_RS14715;Name=eccA5;gbkey=Gene;gene=eccA5;gene_biotype=protein_coding;locus_tag=AL42_RS14715;old_locus_tag=AL42_01845 NZ_KK316784.1 Protein Homology CDS 2017754 2019586 . + 0 ID=cds-WP_003408868.1;Parent=gene-AL42_RS14715;Dbxref=GenBank:WP_003408868.1;Name=WP_003408868.1;gbkey=CDS;gene=eccA5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216314.1;locus_tag=AL42_RS14715;product=type VII secretion system ESX-5 AAA family ATPase EccA5;protein_id=WP_003408868.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2020213 2020404 . + . ID=gene-AL42_RS14720;Name=AL42_RS14720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14720;old_locus_tag=AL42_01846 NZ_KK316784.1 Protein Homology CDS 2020213 2020404 . + 0 ID=cds-WP_003899024.1;Parent=gene-AL42_RS14720;Dbxref=GenBank:WP_003899024.1;Name=WP_003899024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216315.1;locus_tag=AL42_RS14720;product=hypothetical protein;protein_id=WP_003899024.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2020507 2022474 . + . ID=gene-AL42_RS14725;Name=AL42_RS14725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14725;old_locus_tag=AL42_01847 NZ_KK316784.1 Protein Homology CDS 2020507 2022474 . + 0 ID=cds-WP_003901256.1;Parent=gene-AL42_RS14725;Dbxref=GenBank:WP_003901256.1;Name=WP_003901256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177839.1;locus_tag=AL42_RS14725;product=PPE family protein;protein_id=WP_003901256.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2022838 2024099 . - . ID=gene-AL42_RS14730;Name=AL42_RS14730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14730;old_locus_tag=AL42_01848 NZ_KK316784.1 Protein Homology CDS 2023811 2024099 . - 0 ID=cds-WP_087902221.1-6;Parent=gene-AL42_RS14730;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL42_RS14730;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316784.1 Protein Homology CDS 2022838 2023811 . - 2 ID=cds-WP_087902221.1-6;Parent=gene-AL42_RS14730;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL42_RS14730;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2024251 2025415 . - . ID=gene-AL42_RS14740;Name=AL42_RS14740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14740;old_locus_tag=AL42_01850;partial=true;start_range=.,2024251 NZ_KK316784.1 Protein Homology CDS 2025127 2025415 . - 0 ID=cds-WP_116266294.1;Parent=gene-AL42_RS14740;Dbxref=GenBank:WP_116266294.1;Name=WP_116266294.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL42_RS14740;partial=true;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_116266294.1;transl_table=11 NZ_KK316784.1 Protein Homology CDS 2024251 2025127 . - 2 ID=cds-WP_116266294.1;Parent=gene-AL42_RS14740;Dbxref=GenBank:WP_116266294.1;Name=WP_116266294.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL42_RS14740;partial=true;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_116266294.1;start_range=.,2024251;transl_table=11 NZ_KK316784.1 RefSeq gene 2025729 2027000 . + . ID=gene-AL42_RS14750;Name=AL42_RS14750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14750;old_locus_tag=AL42_01852 NZ_KK316784.1 Protein Homology CDS 2025729 2027000 . + 0 ID=cds-WP_003899026.1;Parent=gene-AL42_RS14750;Dbxref=GenBank:WP_003899026.1;Name=WP_003899026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177840.1;locus_tag=AL42_RS14750;product=PPE family protein;protein_id=WP_003899026.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2027078 2028502 . + . ID=gene-AL42_RS14755;Name=AL42_RS14755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14755;old_locus_tag=AL42_01853 NZ_KK316784.1 Protein Homology CDS 2027078 2028502 . + 0 ID=cds-WP_049951304.1;Parent=gene-AL42_RS14755;Dbxref=GenBank:WP_049951304.1;Name=WP_049951304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177841.1;locus_tag=AL42_RS14755;product=PPE family protein;protein_id=WP_049951304.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2028650 2030569 . - . ID=gene-AL42_RS14760;Name=AL42_RS14760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14760;old_locus_tag=AL42_01854 NZ_KK316784.1 Protein Homology CDS 2028650 2030569 . - 0 ID=cds-WP_003910446.1;Parent=gene-AL42_RS14760;Dbxref=GenBank:WP_003910446.1;Name=WP_003910446.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177842.1;locus_tag=AL42_RS14760;product=PE family protein;protein_id=WP_003910446.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2030750 2031076 . - . ID=gene-AL42_RS14765;Name=AL42_RS14765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14765;old_locus_tag=AL42_01855 NZ_KK316784.1 Protein Homology CDS 2030750 2031076 . - 0 ID=cds-WP_003409065.1;Parent=gene-AL42_RS14765;Dbxref=GenBank:WP_003409065.1;Name=WP_003409065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216320.1;locus_tag=AL42_RS14765;product=DUF732 domain-containing protein;protein_id=WP_003409065.1;transl_table=11 NZ_KK316784.1 cmsearch riboswitch 2031322 2031496 . + . ID=id-NZ_KK316784.1:2031322..2031496;Dbxref=RFAM:RF00380;Note=The M-box (ykoK) riboswitch appears to function as a genetic 'off' switch that is important for maintaining magnesium homeostasis in bacteria;bound_moiety=magnesium;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_KK316784.1 RefSeq gene 2031799 2032098 . + . ID=gene-AL42_RS14775;Name=AL42_RS14775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14775;old_locus_tag=AL42_01857 NZ_KK316784.1 Protein Homology CDS 2031799 2032098 . + 0 ID=cds-WP_003900412.1;Parent=gene-AL42_RS14775;Dbxref=GenBank:WP_003900412.1;Name=WP_003900412.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177843.1;locus_tag=AL42_RS14775;product=PE family protein;protein_id=WP_003900412.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2032113 2033324 . + . ID=gene-AL42_RS14780;Name=AL42_RS14780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14780;old_locus_tag=AL42_01858 NZ_KK316784.1 Protein Homology CDS 2032113 2033324 . + 0 ID=cds-WP_003409179.1;Parent=gene-AL42_RS14780;Dbxref=GenBank:WP_003409179.1;Name=WP_003409179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003916893.1;locus_tag=AL42_RS14780;product=PPE family protein;protein_id=WP_003409179.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2033648 2034877 . + . ID=gene-AL42_RS14785;Name=AL42_RS14785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14785;old_locus_tag=AL42_01859 NZ_KK316784.1 Protein Homology CDS 2033648 2034877 . + 0 ID=cds-WP_003901258.1;Parent=gene-AL42_RS14785;Dbxref=GenBank:WP_003901258.1;Name=WP_003901258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177844.1;locus_tag=AL42_RS14785;product=PPE family protein;protein_id=WP_003901258.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2035009 2036415 . + . ID=gene-AL42_RS14790;Name=AL42_RS14790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14790;old_locus_tag=AL42_01860 NZ_KK316784.1 Protein Homology CDS 2035009 2036415 . + 0 ID=cds-WP_031721814.1;Parent=gene-AL42_RS14790;Dbxref=GenBank:WP_031721814.1;Name=WP_031721814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177845.1;locus_tag=AL42_RS14790;product=PPE family protein;protein_id=WP_031721814.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2036696 2037016 . + . ID=gene-AL42_RS14795;Name=AL42_RS14795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14795;old_locus_tag=AL42_01861 NZ_KK316784.1 Protein Homology CDS 2036696 2037016 . + 0 ID=cds-WP_015288168.1;Parent=gene-AL42_RS14795;Dbxref=GenBank:WP_015288168.1;Name=WP_015288168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015288168.1;locus_tag=AL42_RS14795;product=DUF732 domain-containing protein;protein_id=WP_015288168.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2037170 2037874 . + . ID=gene-AL42_RS14800;Name=mgtC;gbkey=Gene;gene=mgtC;gene_biotype=protein_coding;locus_tag=AL42_RS14800;old_locus_tag=AL42_01862 NZ_KK316784.1 Protein Homology CDS 2037170 2037874 . + 0 ID=cds-WP_003899032.1;Parent=gene-AL42_RS14800;Dbxref=GenBank:WP_003899032.1;Name=WP_003899032.1;Ontology_term=GO:0016020;gbkey=CDS;gene=mgtC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216327.1;locus_tag=AL42_RS14800;product=MgtC/SapB family protein;protein_id=WP_003899032.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2037884 2039086 . - . ID=gene-AL42_RS14805;Name=AL42_RS14805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14805;old_locus_tag=AL42_01863 NZ_KK316784.1 Protein Homology CDS 2037884 2039086 . - 0 ID=cds-WP_003409193.1;Parent=gene-AL42_RS14805;Dbxref=GenBank:WP_003409193.1;Name=WP_003409193.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216328.1;locus_tag=AL42_RS14805;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_003409193.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2039408 2039839 . - . ID=gene-AL42_RS14810;Name=AL42_RS14810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14810;old_locus_tag=AL42_01864 NZ_KK316784.1 Protein Homology CDS 2039408 2039839 . - 0 ID=cds-WP_003409199.1;Parent=gene-AL42_RS14810;Dbxref=GenBank:WP_003409199.1;Name=WP_003409199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216329.1;locus_tag=AL42_RS14810;product=DUF4189 domain-containing protein;protein_id=WP_003409199.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2040206 2041150 . + . ID=gene-AL42_RS14815;Name=AL42_RS14815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14815;old_locus_tag=AL42_01865 NZ_KK316784.1 Protein Homology CDS 2040206 2041150 . + 0 ID=cds-WP_003899033.1;Parent=gene-AL42_RS14815;Dbxref=GenBank:WP_003899033.1;Name=WP_003899033.1;Ontology_term=GO:0006629,GO:0008610,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=lipid metabolic process|0006629||IEA,lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019283784.1;locus_tag=AL42_RS14815;product=sterol desaturase family protein;protein_id=WP_003899033.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2041255 2041920 . + . ID=gene-AL42_RS14820;Name=AL42_RS14820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14820;old_locus_tag=AL42_01866 NZ_KK316784.1 Protein Homology CDS 2041255 2041920 . + 0 ID=cds-WP_031721815.1;Parent=gene-AL42_RS14820;Dbxref=GenBank:WP_031721815.1;Name=WP_031721815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216331.1;locus_tag=AL42_RS14820;product=Rv1815 family serine proteinase;protein_id=WP_031721815.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2042001 2042687 . + . ID=gene-AL42_RS14825;Name=AL42_RS14825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14825;old_locus_tag=AL42_01867 NZ_KK316784.1 Protein Homology CDS 2042001 2042687 . + 0 ID=cds-WP_003899034.1;Parent=gene-AL42_RS14825;Dbxref=GenBank:WP_003899034.1;Name=WP_003899034.1;Ontology_term=GO:0006355,GO:0045892,GO:0046677,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011725120.1;locus_tag=AL42_RS14825;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003899034.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2042826 2043103 . + . ID=gene-AL42_RS27620;Name=AL42_RS27620;end_range=2043103,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS27620;partial=true;pseudo=true NZ_KK316784.1 Protein Homology CDS 2042826 2043103 . + 0 ID=cds-AL42_RS27620;Parent=gene-AL42_RS27620;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2043103,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009977032.1;locus_tag=AL42_RS27620;partial=true;product=VOC family protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2043174 2043248 . + . ID=gene-AL42_RS26865;Name=AL42_RS26865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS26865;partial=true;pseudo=true;start_range=.,2043174 NZ_KK316784.1 Protein Homology CDS 2043174 2043248 . + 0 ID=cds-AL42_RS26865;Parent=gene-AL42_RS26865;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217793.1;locus_tag=AL42_RS26865;partial=true;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;pseudo=true;start_range=.,2043174;transl_table=11 NZ_KK316784.1 RefSeq gene 2043322 2044785 . + . ID=gene-AL42_RS14830;Name=AL42_RS14830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14830;old_locus_tag=AL42_01868 NZ_KK316784.1 Protein Homology CDS 2043322 2044785 . + 0 ID=cds-WP_003409207.1;Parent=gene-AL42_RS14830;Dbxref=GenBank:WP_003409207.1;Name=WP_003409207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216333.1;locus_tag=AL42_RS14830;product=FAD-binding protein;protein_id=WP_003409207.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2045889 2046410 . - . ID=gene-AL42_RS27625;Name=AL42_RS27625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS27625;partial=true;pseudo=true;start_range=.,2045889 NZ_KK316784.1 Protein Homology CDS 2045889 2046410 . - 0 ID=cds-AL42_RS27625;Parent=gene-AL42_RS27625;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177749.1;locus_tag=AL42_RS27625;partial=true;product=PE family protein;pseudo=true;start_range=.,2045889;transl_table=11 NZ_KK316784.1 RefSeq gene 2046545 2048464 . - . ID=gene-AL42_RS14840;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=AL42_RS14840;old_locus_tag=AL42_01870 NZ_KK316784.1 Protein Homology CDS 2046545 2048464 . - 0 ID=cds-WP_003900416.1;Parent=gene-AL42_RS14840;Dbxref=GenBank:WP_003900416.1;Name=WP_003900416.1;gbkey=CDS;gene=bacA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216335.1;locus_tag=AL42_RS14840;product=vitamin B12 ABC transporter pemease/ATP-binding protein BacA;protein_id=WP_003900416.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2048535 2050178 . + . ID=gene-AL42_RS14845;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=AL42_RS14845;old_locus_tag=AL42_01871 NZ_KK316784.1 Protein Homology CDS 2048535 2050178 . + 0 ID=cds-WP_003409218.1;Parent=gene-AL42_RS14845;Dbxref=GenBank:WP_003409218.1;Name=WP_003409218.1;gbkey=CDS;gene=ilvG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216336.1;locus_tag=AL42_RS14845;product=acetolactate synthase;protein_id=WP_003409218.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2050283 2052619 . + . ID=gene-AL42_RS14850;Name=secA2;gbkey=Gene;gene=secA2;gene_biotype=protein_coding;locus_tag=AL42_RS14850;old_locus_tag=AL42_01872 NZ_KK316784.1 Protein Homology CDS 2050283 2052619 . + 0 ID=cds-WP_009940597.1;Parent=gene-AL42_RS14850;Dbxref=GenBank:WP_009940597.1;Name=WP_009940597.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524,GO:0016020;gbkey=CDS;gene=secA2;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010908708.1;locus_tag=AL42_RS14850;product=accessory Sec system translocase SecA2;protein_id=WP_009940597.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2052816 2053445 . + . ID=gene-AL42_RS14855;Name=AL42_RS14855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14855;old_locus_tag=AL42_01873 NZ_KK316784.1 Protein Homology CDS 2052816 2053445 . + 0 ID=cds-WP_003409227.1;Parent=gene-AL42_RS14855;Dbxref=GenBank:WP_003409227.1;Name=WP_003409227.1;Ontology_term=GO:0008654,GO:0000287,GO:0016780,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216338.1;locus_tag=AL42_RS14855;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_003409227.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2053438 2054361 . + . ID=gene-AL42_RS14860;Name=AL42_RS14860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14860;old_locus_tag=AL42_01874 NZ_KK316784.1 Protein Homology CDS 2053438 2054361 . + 0 ID=cds-WP_003905660.1;Parent=gene-AL42_RS14860;Dbxref=GenBank:WP_003905660.1;Name=WP_003905660.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216339.1;locus_tag=AL42_RS14860;product=DUF881 domain-containing protein;protein_id=WP_003905660.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2054390 2054755 . + . ID=gene-AL42_RS14865;Name=AL42_RS14865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14865;old_locus_tag=AL42_01875 NZ_KK316784.1 Protein Homology CDS 2054390 2054755 . + 0 ID=cds-WP_003899037.1;Parent=gene-AL42_RS14865;Dbxref=GenBank:WP_003899037.1;Name=WP_003899037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216340.1;locus_tag=AL42_RS14865;product=small basic family protein;protein_id=WP_003899037.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2054772 2055650 . + . ID=gene-AL42_RS14870;Name=AL42_RS14870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14870;old_locus_tag=AL42_01876 NZ_KK316784.1 Protein Homology CDS 2054772 2055650 . + 0 ID=cds-WP_003899038.1;Parent=gene-AL42_RS14870;Dbxref=GenBank:WP_003899038.1;Name=WP_003899038.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216341.1;locus_tag=AL42_RS14870;product=DUF881 domain-containing protein;protein_id=WP_003899038.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2055688 2056092 . + . ID=gene-AL42_RS14875;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=AL42_RS14875;old_locus_tag=AL42_01877 NZ_KK316784.1 Protein Homology CDS 2055688 2056092 . + 0 ID=cds-WP_003901263.1;Parent=gene-AL42_RS14875;Dbxref=GenBank:WP_003901263.1;Name=WP_003901263.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216342.1;locus_tag=AL42_RS14875;product=glycine cleavage system protein GcvH;protein_id=WP_003901263.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2056332 2056820 . + . ID=gene-AL42_RS14880;Name=garA;gbkey=Gene;gene=garA;gene_biotype=protein_coding;locus_tag=AL42_RS14880;old_locus_tag=AL42_01878 NZ_KK316784.1 Protein Homology CDS 2056332 2056820 . + 0 ID=cds-WP_003899041.1;Parent=gene-AL42_RS14880;Dbxref=GenBank:WP_003899041.1;Name=WP_003899041.1;gbkey=CDS;gene=garA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216343.1;locus_tag=AL42_RS14880;product=glycogen accumulation regulator GarA;protein_id=WP_003899041.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2056817 2057560 . + . ID=gene-AL42_RS14885;Name=ftsR;gbkey=Gene;gene=ftsR;gene_biotype=protein_coding;locus_tag=AL42_RS14885;old_locus_tag=AL42_01879 NZ_KK316784.1 Protein Homology CDS 2056817 2057560 . + 0 ID=cds-WP_003409239.1;Parent=gene-AL42_RS14885;Dbxref=GenBank:WP_003409239.1;Name=WP_003409239.1;gbkey=CDS;gene=ftsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216344.1;locus_tag=AL42_RS14885;product=transcriptional regulator FtsR;protein_id=WP_003409239.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2057679 2058173 . + . ID=gene-AL42_RS14890;Name=AL42_RS14890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14890;old_locus_tag=AL42_01880 NZ_KK316784.1 Protein Homology CDS 2057679 2058173 . + 0 ID=cds-WP_003409242.1;Parent=gene-AL42_RS14890;Dbxref=GenBank:WP_003409242.1;Name=WP_003409242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003409242.1;locus_tag=AL42_RS14890;product=bifunctional nuclease family protein;protein_id=WP_003409242.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2058510 2059142 . + . ID=gene-AL42_RS14895;Name=AL42_RS14895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14895;old_locus_tag=AL42_01881 NZ_KK316784.1 Protein Homology CDS 2058510 2059142 . + 0 ID=cds-WP_003911669.1;Parent=gene-AL42_RS14895;Dbxref=GenBank:WP_003911669.1;Name=WP_003911669.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007771372.1;locus_tag=AL42_RS14895;product=MerR family transcriptional regulator;protein_id=WP_003911669.1;transl_table=11 NZ_KK316784.1 cmsearch riboswitch 2059237 2059334 . + . ID=id-NZ_KK316784.1:2059237..2059334;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_KK316784.1 cmsearch riboswitch 2059335 2059468 . + . ID=id-NZ_KK316784.1:2059335..2059468;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_KK316784.1 RefSeq gene 2059501 2062326 . + . ID=gene-AL42_RS14905;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=AL42_RS14905;old_locus_tag=AL42_01883 NZ_KK316784.1 Protein Homology CDS 2059501 2062326 . + 0 ID=cds-WP_003900418.1;Parent=gene-AL42_RS14905;Dbxref=GenBank:WP_003900418.1;Name=WP_003900418.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216348.1;locus_tag=AL42_RS14905;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_003900418.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2062553 2063413 . - . ID=gene-AL42_RS14910;Name=AL42_RS14910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14910;old_locus_tag=AL42_01884 NZ_KK316784.1 Protein Homology CDS 2062553 2063413 . - 0 ID=cds-WP_003409254.1;Parent=gene-AL42_RS14910;Dbxref=GenBank:WP_003409254.1;Name=WP_003409254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216349.1;locus_tag=AL42_RS14910;product=haloalkane dehalogenase;protein_id=WP_003409254.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2063454 2064320 . + . ID=gene-AL42_RS14915;Name=lipZ;gbkey=Gene;gene=lipZ;gene_biotype=protein_coding;locus_tag=AL42_RS14915;old_locus_tag=AL42_01885 NZ_KK316784.1 Protein Homology CDS 2063454 2064320 . + 0 ID=cds-WP_003409255.1;Parent=gene-AL42_RS14915;Dbxref=GenBank:WP_003409255.1;Name=WP_003409255.1;gbkey=CDS;gene=lipZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216350.1;locus_tag=AL42_RS14915;product=alpha/beta fold hydrolase;protein_id=WP_003409255.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2064325 2066211 . - . ID=gene-AL42_RS14920;Name=AL42_RS14920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14920;old_locus_tag=AL42_01886 NZ_KK316784.1 Protein Homology CDS 2064325 2066211 . - 0 ID=cds-WP_031721920.1;Parent=gene-AL42_RS14920;Dbxref=GenBank:WP_031721920.1;Name=WP_031721920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216351.1;locus_tag=AL42_RS14920;product=CocE/NonD family hydrolase;protein_id=WP_031721920.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2066227 2068260 . - . ID=gene-AL42_RS14925;Name=AL42_RS14925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14925;old_locus_tag=AL42_01887 NZ_KK316784.1 Protein Homology CDS 2066227 2068260 . - 0 ID=cds-WP_003901265.1;Parent=gene-AL42_RS14925;Dbxref=GenBank:WP_003901265.1;Name=WP_003901265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216352.1;locus_tag=AL42_RS14925;product=substrate-binding domain-containing protein;protein_id=WP_003901265.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2068380 2070605 . - . ID=gene-AL42_RS14930;Name=glcB;gbkey=Gene;gene=glcB;gene_biotype=protein_coding;locus_tag=AL42_RS14930;old_locus_tag=AL42_01888 NZ_KK316784.1 Protein Homology CDS 2068380 2070605 . - 0 ID=cds-WP_003905667.1;Parent=gene-AL42_RS14930;Dbxref=GenBank:WP_003905667.1;Name=WP_003905667.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;gene=glcB;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216353.1;locus_tag=AL42_RS14930;product=malate synthase G;protein_id=WP_003905667.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2070881 2071276 . - . ID=gene-AL42_RS14935;Name=AL42_RS14935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14935;old_locus_tag=AL42_01889 NZ_KK316784.1 Protein Homology CDS 2070881 2071276 . - 0 ID=cds-WP_003409273.1;Parent=gene-AL42_RS14935;Dbxref=GenBank:WP_003409273.1;Name=WP_003409273.1;Ontology_term=GO:0004540,GO:0046872,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216354.1;locus_tag=AL42_RS14935;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003409273.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2071273 2071536 . - . ID=gene-AL42_RS14940;Name=AL42_RS14940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14940;old_locus_tag=AL42_01890 NZ_KK316784.1 Protein Homology CDS 2071273 2071536 . - 0 ID=cds-WP_003409276.1;Parent=gene-AL42_RS14940;Dbxref=GenBank:WP_003409276.1;Name=WP_003409276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216355.1;locus_tag=AL42_RS14940;product=antitoxin;protein_id=WP_003409276.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2071595 2073142 . - . ID=gene-AL42_RS14945;Name=AL42_RS14945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14945;old_locus_tag=AL42_01891 NZ_KK316784.1 Protein Homology CDS 2071595 2073142 . - 0 ID=cds-WP_003904712.1;Parent=gene-AL42_RS14945;Dbxref=GenBank:WP_003904712.1;Name=WP_003904712.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177847.1;locus_tag=AL42_RS14945;product=PE family protein;protein_id=WP_003904712.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2073305 2074342 . - . ID=gene-AL42_RS14950;Name=AL42_RS14950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14950;old_locus_tag=AL42_01892 NZ_KK316784.1 Protein Homology CDS 2073305 2074342 . - 0 ID=cds-WP_031721816.1;Parent=gene-AL42_RS14950;Dbxref=GenBank:WP_031721816.1;Name=WP_031721816.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216357.1;locus_tag=AL42_RS14950;product=hemolysin family protein;protein_id=WP_031721816.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2074342 2075709 . - . ID=gene-AL42_RS14955;Name=AL42_RS14955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14955;old_locus_tag=AL42_01893 NZ_KK316784.1 Protein Homology CDS 2074342 2075709 . - 0 ID=cds-WP_003899046.1;Parent=gene-AL42_RS14955;Dbxref=GenBank:WP_003899046.1;Name=WP_003899046.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216358.1;locus_tag=AL42_RS14955;product=hemolysin family protein;protein_id=WP_003899046.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2075883 2077322 . - . ID=gene-AL42_RS14960;Name=AL42_RS14960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14960;old_locus_tag=AL42_01894 NZ_KK316784.1 Protein Homology CDS 2075883 2077322 . - 0 ID=cds-WP_003902189.1;Parent=gene-AL42_RS14960;Dbxref=GenBank:WP_003902189.1;Name=WP_003902189.1;Ontology_term=GO:0003938;gbkey=CDS;go_function=IMP dehydrogenase activity|0003938||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216359.1;locus_tag=AL42_RS14960;product=GuaB1 family IMP dehydrogenase-related protein;protein_id=WP_003902189.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2077355 2078806 . - . ID=gene-AL42_RS14965;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=AL42_RS14965;old_locus_tag=AL42_01895 NZ_KK316784.1 Protein Homology CDS 2077355 2078806 . - 0 ID=cds-WP_003409284.1;Parent=gene-AL42_RS14965;Dbxref=GenBank:WP_003409284.1;Name=WP_003409284.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177848.1;locus_tag=AL42_RS14965;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_003409284.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2078836 2079786 . - . ID=gene-AL42_RS14970;Name=blaR;gbkey=Gene;gene=blaR;gene_biotype=protein_coding;locus_tag=AL42_RS14970;old_locus_tag=AL42_01896 NZ_KK316784.1 Protein Homology CDS 2078836 2079786 . - 0 ID=cds-WP_003409298.1;Parent=gene-AL42_RS14970;Dbxref=GenBank:WP_003409298.1;Name=WP_003409298.1;Ontology_term=GO:0008233,GO:0046872,GO:0016020;gbkey=CDS;gene=blaR;go_component=membrane|0016020||IEA;go_function=peptidase activity|0008233||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216361.1;locus_tag=AL42_RS14970;product=M56 family metallopeptidase;protein_id=WP_003409298.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2079801 2080217 . - . ID=gene-AL42_RS14975;Name=blaI;gbkey=Gene;gene=blaI;gene_biotype=protein_coding;locus_tag=AL42_RS14975;old_locus_tag=AL42_01897 NZ_KK316784.1 Protein Homology CDS 2079801 2080217 . - 0 ID=cds-WP_003409301.1;Parent=gene-AL42_RS14975;Dbxref=GenBank:WP_003409301.1;Name=WP_003409301.1;gbkey=CDS;gene=blaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216362.1;locus_tag=AL42_RS14975;product=transcriptional repressor BlaI;protein_id=WP_003409301.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2080495 2080917 . + . ID=gene-AL42_RS14980;Name=AL42_RS14980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS14980;old_locus_tag=AL42_01898 NZ_KK316784.1 Protein Homology CDS 2080495 2080917 . + 0 ID=cds-WP_003902187.1;Parent=gene-AL42_RS14980;Dbxref=GenBank:WP_003902187.1;Name=WP_003902187.1;Ontology_term=GO:0016790,GO:0016836,GO:0047617;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA,hydro-lyase activity|0016836||IEA,fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216363.1;locus_tag=AL42_RS14980;product=PaaI family thioesterase;protein_id=WP_003902187.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2080966 2081268 . + . ID=gene-AL42_RS14985;Name=ureA;gbkey=Gene;gene=ureA;gene_biotype=protein_coding;locus_tag=AL42_RS14985;old_locus_tag=AL42_01899 NZ_KK316784.1 Protein Homology CDS 2080966 2081268 . + 0 ID=cds-WP_003409305.1;Parent=gene-AL42_RS14985;Dbxref=GenBank:WP_003409305.1;Name=WP_003409305.1;Ontology_term=GO:0043419,GO:0009039,GO:0016151;gbkey=CDS;gene=ureA;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216364.1;locus_tag=AL42_RS14985;product=urease subunit gamma;protein_id=WP_003409305.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2081265 2081579 . + . ID=gene-AL42_RS14990;Name=ureB;gbkey=Gene;gene=ureB;gene_biotype=protein_coding;locus_tag=AL42_RS14990;old_locus_tag=AL42_01900 NZ_KK316784.1 Protein Homology CDS 2081265 2081579 . + 0 ID=cds-WP_003409308.1;Parent=gene-AL42_RS14990;Dbxref=GenBank:WP_003409308.1;Name=WP_003409308.1;gbkey=CDS;gene=ureB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216365.1;locus_tag=AL42_RS14990;product=urease subunit beta;protein_id=WP_003409308.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2081579 2083312 . + . ID=gene-AL42_RS14995;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;locus_tag=AL42_RS14995;old_locus_tag=AL42_01901 NZ_KK316784.1 Protein Homology CDS 2081579 2083312 . + 0 ID=cds-WP_003899049.1;Parent=gene-AL42_RS14995;Dbxref=GenBank:WP_003899049.1;Name=WP_003899049.1;Ontology_term=GO:0008152,GO:0009039,GO:0016151;gbkey=CDS;gene=ureC;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216366.1;locus_tag=AL42_RS14995;product=urease subunit alpha;protein_id=WP_003899049.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2083312 2083947 . + . ID=gene-AL42_RS15000;Name=ureF;gbkey=Gene;gene=ureF;gene_biotype=protein_coding;locus_tag=AL42_RS15000;old_locus_tag=AL42_01902 NZ_KK316784.1 Protein Homology CDS 2083312 2083947 . + 0 ID=cds-WP_003899050.1;Parent=gene-AL42_RS15000;Dbxref=GenBank:WP_003899050.1;Name=WP_003899050.1;Ontology_term=GO:0016151;gbkey=CDS;gene=ureF;go_function=nickel cation binding|0016151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216367.1;locus_tag=AL42_RS15000;product=urease accessory protein UreF;protein_id=WP_003899050.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2083958 2084632 . + . ID=gene-AL42_RS15005;Name=ureG;gbkey=Gene;gene=ureG;gene_biotype=protein_coding;locus_tag=AL42_RS15005;old_locus_tag=AL42_01903 NZ_KK316784.1 Protein Homology CDS 2083958 2084632 . + 0 ID=cds-WP_003409313.1;Parent=gene-AL42_RS15005;Dbxref=GenBank:WP_003409313.1;Name=WP_003409313.1;Ontology_term=GO:0019627,GO:0003924,GO:0016530,GO:0046872;gbkey=CDS;gene=ureG;go_function=GTPase activity|0003924||IEA,metallochaperone activity|0016530||IEA,metal ion binding|0046872||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216368.1;locus_tag=AL42_RS15005;product=urease accessory protein UreG;protein_id=WP_003409313.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2084622 2085266 . + . ID=gene-AL42_RS15010;Name=ureD;gbkey=Gene;gene=ureD;gene_biotype=protein_coding;locus_tag=AL42_RS15010;old_locus_tag=AL42_01904 NZ_KK316784.1 Protein Homology CDS 2084622 2085266 . + 0 ID=cds-WP_003900422.1;Parent=gene-AL42_RS15010;Dbxref=GenBank:WP_003900422.1;Name=WP_003900422.1;Ontology_term=GO:0008152,GO:0016151;gbkey=CDS;gene=ureD;go_function=nickel cation binding|0016151||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900422.1;locus_tag=AL42_RS15010;product=urease accessory protein UreD;protein_id=WP_003900422.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2085269 2086660 . - . ID=gene-AL42_RS15015;Name=ndh;gbkey=Gene;gene=ndh;gene_biotype=protein_coding;locus_tag=AL42_RS15015;old_locus_tag=AL42_01905 NZ_KK316784.1 Protein Homology CDS 2085269 2086660 . - 0 ID=cds-WP_003409317.1;Parent=gene-AL42_RS15015;Dbxref=GenBank:WP_003409317.1;Name=WP_003409317.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;gene=ndh;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216370.1;locus_tag=AL42_RS15015;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_003409317.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2086802 2087725 . - . ID=gene-AL42_RS15020;Name=AL42_RS15020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15020;old_locus_tag=AL42_01906 NZ_KK316784.1 Protein Homology CDS 2086802 2087725 . - 0 ID=cds-WP_003409319.1;Parent=gene-AL42_RS15020;Dbxref=GenBank:WP_003409319.1;Name=WP_003409319.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216371.1;locus_tag=AL42_RS15020;product=LLM class F420-dependent oxidoreductase;protein_id=WP_003409319.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2087764 2088441 . - . ID=gene-AL42_RS15025;Name=AL42_RS15025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15025;old_locus_tag=AL42_01907 NZ_KK316784.1 Protein Homology CDS 2087764 2088441 . - 0 ID=cds-WP_003409323.1;Parent=gene-AL42_RS15025;Dbxref=GenBank:WP_003409323.1;Name=WP_003409323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216372.1;locus_tag=AL42_RS15025;product=SDR family oxidoreductase;protein_id=WP_003409323.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2088603 2089388 . + . ID=gene-AL42_RS15030;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=AL42_RS15030;old_locus_tag=AL42_01908 NZ_KK316784.1 Protein Homology CDS 2088603 2089388 . + 0 ID=cds-WP_003409326.1;Parent=gene-AL42_RS15030;Dbxref=GenBank:WP_003409326.1;Name=WP_003409326.1;Ontology_term=GO:0015689,GO:0015412,GO:0030973,GO:0030288,GO:0055052;gbkey=CDS;gene=modA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA,molybdate ion binding|0030973||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216373.1;locus_tag=AL42_RS15030;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_003409326.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2089391 2090185 . + . ID=gene-AL42_RS15035;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=AL42_RS15035;old_locus_tag=AL42_01909 NZ_KK316784.1 Protein Homology CDS 2089391 2090185 . + 0 ID=cds-WP_003409329.1;Parent=gene-AL42_RS15035;Dbxref=GenBank:WP_003409329.1;Name=WP_003409329.1;Ontology_term=GO:0055085,GO:0042626,GO:0016020,GO:0043190;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216374.1;locus_tag=AL42_RS15035;product=ABC transporter permease;protein_id=WP_003409329.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2090192 2091301 . + . ID=gene-AL42_RS15040;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=AL42_RS15040;old_locus_tag=AL42_01910 NZ_KK316784.1 Protein Homology CDS 2090192 2091301 . + 0 ID=cds-WP_003899051.1;Parent=gene-AL42_RS15040;Dbxref=GenBank:WP_003899051.1;Name=WP_003899051.1;Ontology_term=GO:0005524,GO:0015419,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=modC;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216375.1;locus_tag=AL42_RS15040;product=sulfate/molybdate ABC transporter ATP-binding protein;protein_id=WP_003899051.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2091354 2092331 . + . ID=gene-AL42_RS15045;Name=apa;gbkey=Gene;gene=apa;gene_biotype=protein_coding;locus_tag=AL42_RS15045;old_locus_tag=AL42_01911 NZ_KK316784.1 Protein Homology CDS 2091354 2092331 . + 0 ID=cds-WP_003409337.1;Parent=gene-AL42_RS15045;Dbxref=GenBank:WP_003409337.1;Name=WP_003409337.1;gbkey=CDS;gene=apa;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177849.1;locus_tag=AL42_RS15045;product=adhesin Apa;protein_id=WP_003409337.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2092783 2093088 . + . ID=gene-AL42_RS15050;Name=AL42_RS15050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15050;old_locus_tag=AL42_01912 NZ_KK316784.1 Protein Homology CDS 2092783 2093088 . + 0 ID=cds-WP_003409339.1;Parent=gene-AL42_RS15050;Dbxref=GenBank:WP_003409339.1;Name=WP_003409339.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216377.1;locus_tag=AL42_RS15050;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_003409339.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2093163 2094203 . + . ID=gene-AL42_RS15055;Name=adhA;gbkey=Gene;gene=adhA;gene_biotype=protein_coding;locus_tag=AL42_RS15055;old_locus_tag=AL42_01913 NZ_KK316784.1 Protein Homology CDS 2093163 2094203 . + 0 ID=cds-WP_003409345.1;Parent=gene-AL42_RS15055;Dbxref=GenBank:WP_003409345.1;Name=WP_003409345.1;Ontology_term=GO:0006113,GO:0004022,GO:0008270;gbkey=CDS;gene=adhA;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216378.1;locus_tag=AL42_RS15055;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_003409345.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2094210 2094980 . - . ID=gene-AL42_RS15060;Name=AL42_RS15060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15060;old_locus_tag=AL42_01914 NZ_KK316784.1 Protein Homology CDS 2094210 2094980 . - 0 ID=cds-WP_003899053.1;Parent=gene-AL42_RS15060;Dbxref=GenBank:WP_003899053.1;Name=WP_003899053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003927504.1;locus_tag=AL42_RS15060;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_003899053.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2094973 2095659 . - . ID=gene-AL42_RS15065;Name=AL42_RS15065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15065;old_locus_tag=AL42_01915 NZ_KK316784.1 Protein Homology CDS 2094973 2095659 . - 0 ID=cds-WP_003911693.1;Parent=gene-AL42_RS15065;Dbxref=GenBank:WP_003911693.1;Name=WP_003911693.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911693.1;locus_tag=AL42_RS15065;product=MOSC domain-containing protein;protein_id=WP_003911693.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2095725 2096585 . - . ID=gene-AL42_RS15070;Name=AL42_RS15070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15070;old_locus_tag=AL42_01916 NZ_KK316784.1 Protein Homology CDS 2095725 2096585 . - 0 ID=cds-WP_003409355.1;Parent=gene-AL42_RS15070;Dbxref=GenBank:WP_003409355.1;Name=WP_003409355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216381.1;locus_tag=AL42_RS15070;product=SDR family oxidoreductase;protein_id=WP_003409355.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2096681 2099095 . + . ID=gene-AL42_RS15075;Name=AL42_RS15075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15075;old_locus_tag=AL42_01917 NZ_KK316784.1 Protein Homology CDS 2096681 2099095 . + 0 ID=cds-WP_003900424.1;Parent=gene-AL42_RS15075;Dbxref=GenBank:WP_003900424.1;Name=WP_003900424.1;Ontology_term=GO:0003824,GO:0008410;gbkey=CDS;go_function=catalytic activity|0003824||IEA,CoA-transferase activity|0008410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010924453.1;locus_tag=AL42_RS15075;product=CaiB/BaiF CoA-transferase family protein;protein_id=WP_003900424.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2099250 2099420 . - . ID=gene-AL42_RS25905;Name=AL42_RS25905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS25905;old_locus_tag=AL42_01918;partial=true;pseudo=true;start_range=.,2099250 NZ_KK316784.1 Protein Homology CDS 2099250 2099420 . - 0 ID=cds-AL42_RS25905;Parent=gene-AL42_RS25905;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003409378.1;locus_tag=AL42_RS25905;partial=true;product=endonuclease;pseudo=true;start_range=.,2099250;transl_table=11 NZ_KK316784.1 RefSeq gene 2099506 2099895 . - . ID=gene-AL42_RS15080;Name=AL42_RS15080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15080;old_locus_tag=AL42_01919 NZ_KK316784.1 Protein Homology CDS 2099506 2099895 . - 0 ID=cds-WP_003409380.1;Parent=gene-AL42_RS15080;Dbxref=GenBank:WP_003409380.1;Name=WP_003409380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216387.1;locus_tag=AL42_RS15080;product=nitroreductase family deazaflavin-dependent oxidoreductase;protein_id=WP_003409380.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2099918 2101162 . - . ID=gene-AL42_RS15085;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=AL42_RS15085;old_locus_tag=AL42_01920 NZ_KK316784.1 Protein Homology CDS 2099918 2101162 . - 0 ID=cds-WP_003901276.1;Parent=gene-AL42_RS15085;Dbxref=GenBank:WP_003901276.1;Name=WP_003901276.1;gbkey=CDS;gene=lldD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216388.1;locus_tag=AL42_RS15085;product=quinone-dependent L-lactate dehydrogenase;protein_id=WP_003901276.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2101185 2101622 . + . ID=gene-AL42_RS15090;Name=AL42_RS15090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15090;old_locus_tag=AL42_01921 NZ_KK316784.1 Protein Homology CDS 2101185 2101622 . + 0 ID=cds-WP_003409385.1;Parent=gene-AL42_RS15090;Dbxref=GenBank:WP_003409385.1;Name=WP_003409385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216389.1;locus_tag=AL42_RS15090;product=DUF1810 domain-containing protein;protein_id=WP_003409385.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2101677 2102381 . + . ID=gene-AL42_RS15095;Name=AL42_RS15095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15095;old_locus_tag=AL42_01922 NZ_KK316784.1 Protein Homology CDS 2101677 2102381 . + 0 ID=cds-WP_003899058.1;Parent=gene-AL42_RS15095;Dbxref=GenBank:WP_003899058.1;Name=WP_003899058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017487708.1;locus_tag=AL42_RS15095;product=EthD domain-containing protein;protein_id=WP_003899058.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2102392 2102835 . + . ID=gene-AL42_RS15100;Name=AL42_RS15100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15100;old_locus_tag=AL42_01923 NZ_KK316784.1 Protein Homology CDS 2102392 2102835 . + 0 ID=cds-WP_003899059.1;Parent=gene-AL42_RS15100;Dbxref=GenBank:WP_003899059.1;Name=WP_003899059.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216391.1;locus_tag=AL42_RS15100;product=PPOX class F420-dependent oxidoreductase;protein_id=WP_003899059.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2102841 2103053 . - . ID=gene-AL42_RS25910;Name=AL42_RS25910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS25910 NZ_KK316784.1 Protein Homology CDS 2102841 2103053 . - 0 ID=cds-WP_003910872.1;Parent=gene-AL42_RS25910;Dbxref=GenBank:WP_003910872.1;Name=WP_003910872.1;Ontology_term=GO:0046872,GO:0051537;gbkey=CDS;go_function=metal ion binding|0046872||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003910872.1;locus_tag=AL42_RS25910;product=(2Fe-2S)-binding protein;protein_id=WP_003910872.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2103351 2103830 . + . ID=gene-AL42_RS15105;Name=bfrA;gbkey=Gene;gene=bfrA;gene_biotype=protein_coding;locus_tag=AL42_RS15105;old_locus_tag=AL42_01924 NZ_KK316784.1 Protein Homology CDS 2103351 2103830 . + 0 ID=cds-WP_003409398.1;Parent=gene-AL42_RS15105;Dbxref=GenBank:WP_003409398.1;Name=WP_003409398.1;gbkey=CDS;gene=bfrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003876561.1;locus_tag=AL42_RS15105;product=bacterioferritin BfrA;protein_id=WP_003409398.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2103915 2105978 . + . ID=gene-AL42_RS15110;Name=AL42_RS15110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15110;old_locus_tag=AL42_01925 NZ_KK316784.1 Protein Homology CDS 2103915 2105978 . + 0 ID=cds-WP_003899060.1;Parent=gene-AL42_RS15110;Dbxref=GenBank:WP_003899060.1;Name=WP_003899060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216393.1;locus_tag=AL42_RS15110;product=Rv1877 family multidrug efflux MFS transporter;protein_id=WP_003899060.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2106033 2107385 . + . ID=gene-AL42_RS15115;Name=AL42_RS15115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15115;old_locus_tag=AL42_01926 NZ_KK316784.1 Protein Homology CDS 2106033 2107385 . + 0 ID=cds-WP_003409401.1;Parent=gene-AL42_RS15115;Dbxref=GenBank:WP_003409401.1;Name=WP_003409401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216394.1;locus_tag=AL42_RS15115;product=type I glutamate--ammonia ligase;protein_id=WP_003409401.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2107388 2108524 . + . ID=gene-AL42_RS15120;Name=AL42_RS15120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15120;old_locus_tag=AL42_01927 NZ_KK316784.1 Protein Homology CDS 2107388 2108524 . + 0 ID=cds-WP_003899061.1;Parent=gene-AL42_RS15120;Dbxref=GenBank:WP_003899061.1;Name=WP_003899061.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216395.1;locus_tag=AL42_RS15120;product=amidohydrolase family protein;protein_id=WP_003899061.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2108552 2109868 . - . ID=gene-AL42_RS15125;Name=AL42_RS15125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15125;old_locus_tag=AL42_01928 NZ_KK316784.1 Protein Homology CDS 2108552 2109868 . - 0 ID=cds-WP_003409406.1;Parent=gene-AL42_RS15125;Dbxref=GenBank:WP_003409406.1;Name=WP_003409406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216396.3;locus_tag=AL42_RS15125;product=cytochrome P450;protein_id=WP_003409406.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2109918 2110340 . - . ID=gene-AL42_RS15130;Name=lppE;gbkey=Gene;gene=lppE;gene_biotype=protein_coding;locus_tag=AL42_RS15130;old_locus_tag=AL42_01929 NZ_KK316784.1 Protein Homology CDS 2109918 2110340 . - 0 ID=cds-WP_003409409.1;Parent=gene-AL42_RS15130;Dbxref=GenBank:WP_003409409.1;Name=WP_003409409.1;gbkey=CDS;gene=lppE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216397.1;locus_tag=AL42_RS15130;product=lipoprotein LpqH;protein_id=WP_003409409.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2110381 2111214 . - . ID=gene-AL42_RS15135;Name=AL42_RS15135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15135;old_locus_tag=AL42_01930 NZ_KK316784.1 Protein Homology CDS 2110381 2111214 . - 0 ID=cds-WP_003409413.1;Parent=gene-AL42_RS15135;Dbxref=GenBank:WP_003409413.1;Name=WP_003409413.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216398.1;locus_tag=AL42_RS15135;product=SDR family oxidoreductase;protein_id=WP_003409413.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2111242 2111718 . - . ID=gene-AL42_RS15140;Name=AL42_RS15140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15140;old_locus_tag=AL42_01931 NZ_KK316784.1 Protein Homology CDS 2111242 2111718 . - 0 ID=cds-WP_003409417.1;Parent=gene-AL42_RS15140;Dbxref=GenBank:WP_003409417.1;Name=WP_003409417.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216399.1;locus_tag=AL42_RS15140;product=SRPBCC family protein;protein_id=WP_003409417.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2111757 2112287 . - . ID=gene-AL42_RS0104830;Name=rpfC;gbkey=Gene;gene=rpfC;gene_biotype=protein_coding;locus_tag=AL42_RS0104830;old_locus_tag=AL42_01932 NZ_KK316784.1 Protein Homology CDS 2111757 2112287 . - 0 ID=cds-WP_003409420.1;Parent=gene-AL42_RS0104830;Dbxref=GenBank:WP_003409420.1;Name=WP_003409420.1;Ontology_term=GO:0009372,GO:0042127,GO:0016787;gbkey=CDS;gene=rpfC;go_function=hydrolase activity|0016787||IEA;go_process=quorum sensing|0009372||IEA,regulation of cell population proliferation|0042127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216400.1;locus_tag=AL42_RS0104830;product=resuscitation-promoting factor RpfC;protein_id=WP_003409420.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2112299 2112898 . - . ID=gene-AL42_RS15145;Name=AL42_RS15145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15145;old_locus_tag=AL42_01933 NZ_KK316784.1 Protein Homology CDS 2112299 2112898 . - 0 ID=cds-WP_003899064.1;Parent=gene-AL42_RS15145;Dbxref=GenBank:WP_003899064.1;Name=WP_003899064.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216401.1;locus_tag=AL42_RS15145;product=chorismate mutase;protein_id=WP_003899064.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2112916 2113893 . - . ID=gene-AL42_RS15150;Name=ag85B;gbkey=Gene;gene=ag85B;gene_biotype=protein_coding;gene_synonym=fbpB;locus_tag=AL42_RS15150;old_locus_tag=AL42_01934 NZ_KK316784.1 Protein Homology CDS 2112916 2113893 . - 0 ID=cds-WP_003409456.1;Parent=gene-AL42_RS15150;Dbxref=GenBank:WP_003409456.1;Name=WP_003409456.1;gbkey=CDS;gene=ag85B;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216402.1;locus_tag=AL42_RS15150;product=diacylglycerol acyltransferase/mycolyltransferase Ag85B;protein_id=WP_003409456.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2114284 2115426 . + . ID=gene-AL42_RS15155;Name=AL42_RS15155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15155;old_locus_tag=AL42_01935 NZ_KK316784.1 Protein Homology CDS 2114284 2115426 . + 0 ID=cds-WP_003899065.1;Parent=gene-AL42_RS15155;Dbxref=GenBank:WP_003899065.1;Name=WP_003899065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216403.1;locus_tag=AL42_RS15155;product=DUF7159 family protein;protein_id=WP_003899065.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2115396 2116115 . - . ID=gene-AL42_RS0104835;Name=AL42_RS0104835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0104835;old_locus_tag=AL42_01936 NZ_KK316784.1 Protein Homology CDS 2115396 2116115 . - 0 ID=cds-WP_003409492.1;Parent=gene-AL42_RS0104835;Dbxref=GenBank:WP_003409492.1;Name=WP_003409492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003409492.1;locus_tag=AL42_RS0104835;product=DUF4389 domain-containing protein;protein_id=WP_003409492.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2116210 2117053 . - . ID=gene-AL42_RS27390;Name=AL42_RS27390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS27390;pseudo=true NZ_KK316784.1 Protein Homology CDS 2116210 2117053 . - 0 ID=cds-AL42_RS27390;Parent=gene-AL42_RS27390;Note=frameshifted;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020786876.1;locus_tag=AL42_RS27390;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 2117112 2117663 . - . ID=gene-AL42_RS15160;Name=AL42_RS15160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15160;old_locus_tag=AL42_01939 NZ_KK316784.1 Protein Homology CDS 2117112 2117663 . - 0 ID=cds-WP_003911699.1;Parent=gene-AL42_RS15160;Dbxref=GenBank:WP_003911699.1;Name=WP_003911699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911699.1;locus_tag=AL42_RS15160;product=YceI family protein;protein_id=WP_003911699.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2117777 2118184 . + . ID=gene-AL42_RS15165;Name=AL42_RS15165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15165;old_locus_tag=AL42_01940 NZ_KK316784.1 Protein Homology CDS 2117777 2118184 . + 0 ID=cds-WP_003409509.1;Parent=gene-AL42_RS15165;Dbxref=GenBank:WP_003409509.1;Name=WP_003409509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216407.1;locus_tag=AL42_RS15165;product=hypothetical protein;protein_id=WP_003409509.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2118201 2118512 . + . ID=gene-AL42_RS15170;Name=AL42_RS15170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15170;old_locus_tag=AL42_01941 NZ_KK316784.1 Protein Homology CDS 2118201 2118512 . + 0 ID=cds-WP_003409512.1;Parent=gene-AL42_RS15170;Dbxref=GenBank:WP_003409512.1;Name=WP_003409512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216408.1;locus_tag=AL42_RS15170;product=hypothetical protein;protein_id=WP_003409512.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2118522 2118740 . + . ID=gene-AL42_RS15175;Name=AL42_RS15175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15175;old_locus_tag=AL42_01942 NZ_KK316784.1 Protein Homology CDS 2118522 2118740 . + 0 ID=cds-WP_003409515.1;Parent=gene-AL42_RS15175;Dbxref=GenBank:WP_003409515.1;Name=WP_003409515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216409.1;locus_tag=AL42_RS15175;product=Rv1893 family protein;protein_id=WP_003409515.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2118775 2119905 . - . ID=gene-AL42_RS15180;Name=AL42_RS15180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15180;old_locus_tag=AL42_01943 NZ_KK316784.1 Protein Homology CDS 2118775 2119905 . - 0 ID=cds-WP_003409518.1;Parent=gene-AL42_RS15180;Dbxref=GenBank:WP_003409518.1;Name=WP_003409518.1;Ontology_term=GO:0010181,GO:0018580;gbkey=CDS;go_function=FMN binding|0010181||IEA,nitronate monooxygenase activity|0018580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216410.1;locus_tag=AL42_RS15180;product=nitronate monooxygenase;protein_id=WP_003409518.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2119953 2120126 . - . ID=gene-AL42_RS27395;Name=AL42_RS27395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27395 NZ_KK316784.1 Protein Homology CDS 2119953 2120126 . - 0 ID=cds-WP_015456321.1;Parent=gene-AL42_RS27395;Dbxref=GenBank:WP_015456321.1;Name=WP_015456321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015456321.1;locus_tag=AL42_RS27395;product=hypothetical protein;protein_id=WP_015456321.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2120557 2121519 . + . ID=gene-AL42_RS15185;Name=AL42_RS15185;end_range=2121519,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS15185;old_locus_tag=AL42_01944;partial=true;pseudo=true NZ_KK316784.1 Protein Homology CDS 2120557 2121519 . + 0 ID=cds-AL42_RS15185;Parent=gene-AL42_RS15185;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2121519,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012335.6;locus_tag=AL42_RS15185;partial=true;product=alcohol dehydrogenase family protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 2121571 2122482 . - . ID=gene-AL42_RS15190;Name=AL42_RS15190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15190;old_locus_tag=AL42_01945 NZ_KK316784.1 Protein Homology CDS 2121571 2122482 . - 0 ID=cds-WP_003409526.1;Parent=gene-AL42_RS15190;Dbxref=GenBank:WP_003409526.1;Name=WP_003409526.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216412.1;locus_tag=AL42_RS15190;product=class I SAM-dependent methyltransferase;protein_id=WP_003409526.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2122487 2122918 . - . ID=gene-AL42_RS15195;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=AL42_RS15195;old_locus_tag=AL42_01946 NZ_KK316784.1 Protein Homology CDS 2122487 2122918 . - 0 ID=cds-WP_003409533.1;Parent=gene-AL42_RS15195;Dbxref=GenBank:WP_003409533.1;Name=WP_003409533.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216413.1;locus_tag=AL42_RS15195;product=D-aminoacyl-tRNA deacylase;protein_id=WP_003409533.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2122976 2123284 . + . ID=gene-AL42_RS15200;Name=AL42_RS15200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15200;old_locus_tag=AL42_01947 NZ_KK316784.1 Protein Homology CDS 2122976 2123284 . + 0 ID=cds-WP_003409536.1;Parent=gene-AL42_RS15200;Dbxref=GenBank:WP_003409536.1;Name=WP_003409536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216414.1;locus_tag=AL42_RS15200;product=MTH1187 family thiamine-binding protein;protein_id=WP_003409536.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2123250 2123765 . - . ID=gene-AL42_RS27195;Name=AL42_RS27195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27195;old_locus_tag=AL42_01948 NZ_KK316784.1 Protein Homology CDS 2123250 2123765 . - 0 ID=cds-WP_003409537.1;Parent=gene-AL42_RS27195;Dbxref=GenBank:WP_003409537.1;Name=WP_003409537.1;Ontology_term=GO:0072570;gbkey=CDS;go_function=ADP-D-ribose binding|0072570||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015303272.1;locus_tag=AL42_RS27195;product=macro domain-containing protein;protein_id=WP_003409537.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2124006 2124329 . + . ID=gene-AL42_RS27200;Name=AL42_RS27200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27200 NZ_KK316784.1 GeneMarkS-2+ CDS 2124006 2124329 . + 0 ID=cds-WP_128882532.1;Parent=gene-AL42_RS27200;Dbxref=GenBank:WP_128882532.1;Name=WP_128882532.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL42_RS27200;product=hypothetical protein;protein_id=WP_128882532.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2124326 2125714 . - . ID=gene-AL42_RS15210;Name=lipJ;gbkey=Gene;gene=lipJ;gene_biotype=protein_coding;locus_tag=AL42_RS15210;old_locus_tag=AL42_01949 NZ_KK316784.1 Protein Homology CDS 2124326 2125714 . - 0 ID=cds-WP_003409539.1;Parent=gene-AL42_RS15210;Dbxref=GenBank:WP_003409539.1;Name=WP_003409539.1;Ontology_term=GO:0009190,GO:0035556,GO:0009975,GO:0016849,GO:0032555,GO:0046872;gbkey=CDS;gene=lipJ;go_function=cyclase activity|0009975||IEA,phosphorus-oxygen lyase activity|0016849||IEA,purine ribonucleotide binding|0032555||IEA,metal ion binding|0046872||IEA;go_process=cyclic nucleotide biosynthetic process|0009190||IEA,intracellular signal transduction|0035556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216416.1;locus_tag=AL42_RS15210;product=adenylate/guanylate cyclase domain-containing protein;protein_id=WP_003409539.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2125743 2127035 . + . ID=gene-AL42_RS15215;Name=cinA;gbkey=Gene;gene=cinA;gene_biotype=protein_coding;locus_tag=AL42_RS15215;old_locus_tag=AL42_01950 NZ_KK316784.1 Protein Homology CDS 2125743 2127035 . + 0 ID=cds-WP_003900426.1;Parent=gene-AL42_RS15215;Dbxref=GenBank:WP_003900426.1;Name=WP_003900426.1;gbkey=CDS;gene=cinA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216417.1;locus_tag=AL42_RS15215;product=competence/damage-inducible protein A;protein_id=WP_003900426.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2127087 2128355 . - . ID=gene-AL42_RS15220;Name=nanT;gbkey=Gene;gene=nanT;gene_biotype=protein_coding;locus_tag=AL42_RS15220;old_locus_tag=AL42_01951 NZ_KK316784.1 Protein Homology CDS 2127087 2128355 . - 0 ID=cds-WP_003900427.1;Parent=gene-AL42_RS15220;Dbxref=GenBank:WP_003900427.1;Name=WP_003900427.1;Ontology_term=GO:0015718,GO:0008028,GO:0005886;gbkey=CDS;gene=nanT;go_component=plasma membrane|0005886||IEA;go_function=monocarboxylic acid transmembrane transporter activity|0008028||IEA;go_process=monocarboxylic acid transport|0015718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216418.1;locus_tag=AL42_RS15220;product=sialate:H+ symport family MFS transporter;protein_id=WP_003900427.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2128445 2128849 . + . ID=gene-AL42_RS15225;Name=AL42_RS15225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15225;old_locus_tag=AL42_01952 NZ_KK316784.1 Protein Homology CDS 2128445 2128849 . + 0 ID=cds-WP_003409542.1;Parent=gene-AL42_RS15225;Dbxref=GenBank:WP_003409542.1;Name=WP_003409542.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216419.1;locus_tag=AL42_RS15225;product=phage holin family protein;protein_id=WP_003409542.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2129035 2129466 . + . ID=gene-AL42_RS15230;Name=AL42_RS15230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15230;old_locus_tag=AL42_01953 NZ_KK316784.1 Protein Homology CDS 2129035 2129466 . + 0 ID=cds-WP_003905679.1;Parent=gene-AL42_RS15230;Dbxref=GenBank:WP_003905679.1;Name=WP_003905679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216420.1;locus_tag=AL42_RS15230;product=anti-sigma factor antagonist;protein_id=WP_003905679.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2129514 2130476 . - . ID=gene-AL42_RS15235;Name=aao;gbkey=Gene;gene=aao;gene_biotype=protein_coding;locus_tag=AL42_RS15235;old_locus_tag=AL42_01954 NZ_KK316784.1 Protein Homology CDS 2129514 2130476 . - 0 ID=cds-WP_003899072.1;Parent=gene-AL42_RS15235;Dbxref=GenBank:WP_003899072.1;Name=WP_003899072.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;gene=aao;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216421.1;locus_tag=AL42_RS15235;product=FAD-dependent oxidoreductase;protein_id=WP_003899072.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2130506 2130976 . - . ID=gene-AL42_RS15240;Name=AL42_RS15240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15240;old_locus_tag=AL42_01955 NZ_KK316784.1 Protein Homology CDS 2130506 2130976 . - 0 ID=cds-WP_003900428.1;Parent=gene-AL42_RS15240;Dbxref=GenBank:WP_003900428.1;Name=WP_003900428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216422.1;locus_tag=AL42_RS15240;product=hypothetical protein;protein_id=WP_003900428.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2131316 2131780 . - . ID=gene-AL42_RS15245;Name=AL42_RS15245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15245;old_locus_tag=AL42_01956 NZ_KK316784.1 Protein Homology CDS 2131316 2131780 . - 0 ID=cds-WP_014585239.1;Parent=gene-AL42_RS15245;Dbxref=GenBank:WP_014585239.1;Name=WP_014585239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014585239.1;locus_tag=AL42_RS15245;product=DUF4262 domain-containing protein;protein_id=WP_014585239.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2131956 2134178 . - . ID=gene-AL42_RS15250;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=AL42_RS15250;old_locus_tag=AL42_01957 NZ_KK316784.1 Protein Homology CDS 2131956 2134178 . - 0 ID=cds-WP_003901285.1;Parent=gene-AL42_RS15250;Dbxref=GenBank:WP_003901285.1;Name=WP_003901285.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601,GO:0020037;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216424.1;locus_tag=AL42_RS15250;product=catalase/peroxidase HPI;protein_id=WP_003901285.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2134216 2134659 . - . ID=gene-AL42_RS15255;Name=furA;gbkey=Gene;gene=furA;gene_biotype=protein_coding;locus_tag=AL42_RS15255;old_locus_tag=AL42_01958 NZ_KK316784.1 Protein Homology CDS 2134216 2134659 . - 0 ID=cds-WP_003899076.1;Parent=gene-AL42_RS15255;Dbxref=GenBank:WP_003899076.1;Name=WP_003899076.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046872;gbkey=CDS;gene=furA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216425.2;locus_tag=AL42_RS15255;product=Fur family transcriptional regulator;protein_id=WP_003899076.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2134773 2135366 . - . ID=gene-AL42_RS15260;Name=AL42_RS15260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15260;old_locus_tag=AL42_01959 NZ_KK316784.1 Protein Homology CDS 2134773 2135366 . - 0 ID=cds-WP_003409566.1;Parent=gene-AL42_RS15260;Dbxref=GenBank:WP_003409566.1;Name=WP_003409566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216426.1;locus_tag=AL42_RS15260;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WP_003409566.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2135449 2136054 . - . ID=gene-AL42_RS15265;Name=lppC;gbkey=Gene;gene=lppC;gene_biotype=protein_coding;locus_tag=AL42_RS15265;old_locus_tag=AL42_01960 NZ_KK316784.1 Protein Homology CDS 2135449 2136054 . - 0 ID=cds-WP_003409568.1;Parent=gene-AL42_RS15265;Dbxref=GenBank:WP_003409568.1;Name=WP_003409568.1;gbkey=CDS;gene=lppC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216427.1;locus_tag=AL42_RS15265;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WP_003409568.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2136154 2137158 . - . ID=gene-AL42_RS15270;Name=AL42_RS15270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15270;old_locus_tag=AL42_01961 NZ_KK316784.1 Protein Homology CDS 2136154 2137158 . - 0 ID=cds-WP_003409570.1;Parent=gene-AL42_RS15270;Dbxref=GenBank:WP_003409570.1;Name=WP_003409570.1;Ontology_term=GO:0008270,GO:0016491,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216428.1;locus_tag=AL42_RS15270;product=synaptic vesicle VAT-1 family membrane protein;protein_id=WP_003409570.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2137258 2138010 . + . ID=gene-AL42_RS15275;Name=AL42_RS15275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15275;old_locus_tag=AL42_01962 NZ_KK316784.1 Protein Homology CDS 2137258 2138010 . + 0 ID=cds-WP_003409574.1;Parent=gene-AL42_RS15275;Dbxref=GenBank:WP_003409574.1;Name=WP_003409574.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216429.1;locus_tag=AL42_RS15275;product=MBL fold metallo-hydrolase;protein_id=WP_003409574.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2137988 2138395 . - . ID=gene-AL42_RS15280;Name=AL42_RS15280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15280;old_locus_tag=AL42_01963 NZ_KK316784.1 Protein Homology CDS 2137988 2138395 . - 0 ID=cds-WP_003409577.1;Parent=gene-AL42_RS15280;Dbxref=GenBank:WP_003409577.1;Name=WP_003409577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216430.1;locus_tag=AL42_RS15280;product=hypothetical protein;protein_id=WP_003409577.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2138530 2140830 . + . ID=gene-AL42_RS0104865;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=AL42_RS0104865 NZ_KK316784.1 Protein Homology CDS 2138530 2140830 . + 0 ID=cds-WP_003409584.1;Parent=gene-AL42_RS0104865;Dbxref=GenBank:WP_003409584.1;Name=WP_003409584.1;gbkey=CDS;gene=aceA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003409584.1;locus_tag=AL42_RS0104865;product=isocitrate lyase ICL2;protein_id=WP_003409584.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2141000 2143432 . - . ID=gene-AL42_RS15285;Name=AL42_RS15285;end_range=2143432,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15285;old_locus_tag=AL42_01966;partial=true NZ_KK316784.1 Protein Homology CDS 2141000 2143432 . - 0 ID=cds-WP_031653550.1;Parent=gene-AL42_RS15285;Dbxref=GenBank:WP_031653550.1;Name=WP_031653550.1;end_range=2143432,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177655.1;locus_tag=AL42_RS15285;partial=true;product=beta strand repeat-containing protein;protein_id=WP_031653550.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2145758 2147255 . - . ID=gene-AL42_RS0104870;Name=AL42_RS0104870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0104870;partial=true;start_range=.,2145758 NZ_KK316784.1 Protein Homology CDS 2145758 2147255 . - 0 ID=cds-WP_031724279.1;Parent=gene-AL42_RS0104870;Dbxref=GenBank:WP_031724279.1;Name=WP_031724279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177655.1;locus_tag=AL42_RS0104870;partial=true;product=PPE family protein;protein_id=WP_031724279.1;start_range=.,2145758;transl_table=11 NZ_KK316784.1 RefSeq gene 2147593 2150556 . - . ID=gene-AL42_RS15290;Name=AL42_RS15290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15290;old_locus_tag=AL42_01967 NZ_KK316784.1 Protein Homology CDS 2147593 2150556 . - 0 ID=cds-WP_003902179.1;Parent=gene-AL42_RS15290;Dbxref=GenBank:WP_003902179.1;Name=WP_003902179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177850.1;locus_tag=AL42_RS15290;product=PPE family protein;protein_id=WP_003902179.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2151005 2151469 . - . ID=gene-AL42_RS15295;Name=AL42_RS15295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15295;old_locus_tag=AL42_01968 NZ_KK316784.1 Protein Homology CDS 2151005 2151469 . - 0 ID=cds-WP_003899082.1;Parent=gene-AL42_RS15295;Dbxref=GenBank:WP_003899082.1;Name=WP_003899082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216435.1;locus_tag=AL42_RS15295;product=SRPBCC family protein;protein_id=WP_003899082.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2151567 2152430 . + . ID=gene-AL42_RS15300;Name=AL42_RS15300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15300;old_locus_tag=AL42_01969 NZ_KK316784.1 Protein Homology CDS 2151567 2152430 . + 0 ID=cds-WP_003901288.1;Parent=gene-AL42_RS15300;Dbxref=GenBank:WP_003901288.1;Name=WP_003901288.1;Ontology_term=GO:0006644,GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid metabolic process|0006644||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216436.1;locus_tag=AL42_RS15300;product=lysophospholipid acyltransferase family protein;protein_id=WP_003901288.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2152468 2153739 . - . ID=gene-AL42_RS15305;Name=lppF;gbkey=Gene;gene=lppF;gene_biotype=protein_coding;locus_tag=AL42_RS15305;old_locus_tag=AL42_01970 NZ_KK316784.1 Protein Homology CDS 2152468 2153739 . - 0 ID=cds-WP_003409666.1;Parent=gene-AL42_RS15305;Dbxref=GenBank:WP_003409666.1;Name=WP_003409666.1;gbkey=CDS;gene=lppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216437.1;locus_tag=AL42_RS15305;product=haloacid dehalogenase-like hydrolase;protein_id=WP_003409666.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2154011 2155126 . + . ID=gene-AL42_RS15310;Name=AL42_RS15310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15310;old_locus_tag=AL42_01971 NZ_KK316784.1 Protein Homology CDS 2154011 2155126 . + 0 ID=cds-WP_003409667.1;Parent=gene-AL42_RS15310;Dbxref=GenBank:WP_003409667.1;Name=WP_003409667.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216438.1;locus_tag=AL42_RS15310;product=serine hydrolase domain-containing protein;protein_id=WP_003409667.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2155177 2156457 . + . ID=gene-AL42_RS15315;Name=lipD;gbkey=Gene;gene=lipD;gene_biotype=protein_coding;locus_tag=AL42_RS15315;old_locus_tag=AL42_01972 NZ_KK316784.1 Protein Homology CDS 2155177 2156457 . + 0 ID=cds-WP_003911710.1;Parent=gene-AL42_RS15315;Dbxref=GenBank:WP_003911710.1;Name=WP_003911710.1;gbkey=CDS;gene=lipD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911710.1;locus_tag=AL42_RS15315;product=lipase LipD;protein_id=WP_003911710.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2156494 2156874 . - . ID=gene-AL42_RS15320;Name=AL42_RS15320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15320;old_locus_tag=AL42_01973 NZ_KK316784.1 Protein Homology CDS 2156494 2156874 . - 0 ID=cds-WP_003900434.1;Parent=gene-AL42_RS15320;Dbxref=GenBank:WP_003900434.1;Name=WP_003900434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216440.1;locus_tag=AL42_RS15320;product=hypothetical protein;protein_id=WP_003900434.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2157031 2158893 . + . ID=gene-AL42_RS15325;Name=fadD31;gbkey=Gene;gene=fadD31;gene_biotype=protein_coding;gene_synonym=faaL31;locus_tag=AL42_RS15325;old_locus_tag=AL42_01974 NZ_KK316784.1 Protein Homology CDS 2157031 2158893 . + 0 ID=cds-WP_003902177.1;Parent=gene-AL42_RS15325;Dbxref=GenBank:WP_003902177.1;Name=WP_003902177.1;gbkey=CDS;gene=fadD31;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216441.2;locus_tag=AL42_RS15325;product=fatty-acid--AMP ligase FAAL31/FadD31;protein_id=WP_003902177.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2158901 2159380 . - . ID=gene-AL42_RS15330;Name=mpt63;gbkey=Gene;gene=mpt63;gene_biotype=protein_coding;locus_tag=AL42_RS15330;old_locus_tag=AL42_01975 NZ_KK316784.1 Protein Homology CDS 2158901 2159380 . - 0 ID=cds-WP_003409684.1;Parent=gene-AL42_RS15330;Dbxref=GenBank:WP_003409684.1;Name=WP_003409684.1;gbkey=CDS;gene=mpt63;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216442.1;locus_tag=AL42_RS15330;product=immunoprotective protein Mpt63;protein_id=WP_003409684.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2159617 2160390 . + . ID=gene-AL42_RS15335;Name=AL42_RS15335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15335;old_locus_tag=AL42_01976 NZ_KK316784.1 Protein Homology CDS 2159617 2160390 . + 0 ID=cds-WP_003905688.1;Parent=gene-AL42_RS15335;Dbxref=GenBank:WP_003905688.1;Name=WP_003905688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216443.1;locus_tag=AL42_RS15335;product=YqjF family protein;protein_id=WP_003905688.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2160394 2161161 . - . ID=gene-AL42_RS15340;Name=AL42_RS15340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15340;old_locus_tag=AL42_01977 NZ_KK316784.1 Protein Homology CDS 2160394 2161161 . - 0 ID=cds-WP_003409686.1;Parent=gene-AL42_RS15340;Dbxref=GenBank:WP_003409686.1;Name=WP_003409686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216444.1;locus_tag=AL42_RS15340;product=SDR family oxidoreductase;protein_id=WP_003409686.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2161206 2161850 . - . ID=gene-AL42_RS15345;Name=AL42_RS15345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15345;old_locus_tag=AL42_01978 NZ_KK316784.1 Protein Homology CDS 2161206 2161850 . - 0 ID=cds-WP_003409689.1;Parent=gene-AL42_RS15345;Dbxref=GenBank:WP_003409689.1;Name=WP_003409689.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216445.1;locus_tag=AL42_RS15345;product=TIGR03085 family metal-binding protein;protein_id=WP_003409689.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2161862 2162386 . - . ID=gene-AL42_RS15350;Name=AL42_RS15350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15350;old_locus_tag=AL42_01979 NZ_KK316784.1 Protein Homology CDS 2161862 2162386 . - 0 ID=cds-WP_003409694.1;Parent=gene-AL42_RS15350;Dbxref=GenBank:WP_003409694.1;Name=WP_003409694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216446.1;locus_tag=AL42_RS15350;product=type 1 glutamine amidotransferase family protein;protein_id=WP_003409694.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2162404 2163183 . - . ID=gene-AL42_RS15355;Name=AL42_RS15355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15355;old_locus_tag=AL42_01980 NZ_KK316784.1 Protein Homology CDS 2162404 2163183 . - 0 ID=cds-WP_003899087.1;Parent=gene-AL42_RS15355;Dbxref=GenBank:WP_003899087.1;Name=WP_003899087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899087.1;locus_tag=AL42_RS15355;product=HTH-type transcriptional regulator;protein_id=WP_003899087.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2163316 2163813 . + . ID=gene-AL42_RS15360;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=AL42_RS15360;old_locus_tag=AL42_01981 NZ_KK316784.1 Protein Homology CDS 2163316 2163813 . + 0 ID=cds-WP_003409700.1;Parent=gene-AL42_RS15360;Dbxref=GenBank:WP_003409700.1;Name=WP_003409700.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216448.1;locus_tag=AL42_RS15360;product=thiol peroxidase;protein_id=WP_003409700.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2163810 2164901 . - . ID=gene-AL42_RS15365;Name=AL42_RS15365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15365;old_locus_tag=AL42_01982 NZ_KK316784.1 Protein Homology CDS 2163810 2164901 . - 0 ID=cds-WP_003900437.1;Parent=gene-AL42_RS15365;Dbxref=GenBank:WP_003900437.1;Name=WP_003900437.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216449.1;locus_tag=AL42_RS15365;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003900437.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2164903 2166132 . - . ID=gene-AL42_RS15370;Name=AL42_RS15370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15370;old_locus_tag=AL42_01983 NZ_KK316784.1 Protein Homology CDS 2164903 2166132 . - 0 ID=cds-WP_003901292.1;Parent=gene-AL42_RS15370;Dbxref=GenBank:WP_003901292.1;Name=WP_003901292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216450.1;locus_tag=AL42_RS15370;product=acyl-CoA dehydrogenase;protein_id=WP_003901292.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2166147 2167103 . - . ID=gene-AL42_RS15375;Name=AL42_RS15375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15375;old_locus_tag=AL42_01984 NZ_KK316784.1 Protein Homology CDS 2166147 2167103 . - 0 ID=cds-WP_003409707.1;Parent=gene-AL42_RS15375;Dbxref=GenBank:WP_003409707.1;Name=WP_003409707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216451.1;locus_tag=AL42_RS15375;product=enoyl-CoA hydratase;protein_id=WP_003409707.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2167328 2168437 . + . ID=gene-AL42_RS15380;Name=AL42_RS15380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15380;old_locus_tag=AL42_01985 NZ_KK316784.1 Protein Homology CDS 2167328 2168437 . + 0 ID=cds-WP_003901293.1;Parent=gene-AL42_RS15380;Dbxref=GenBank:WP_003901293.1;Name=WP_003901293.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216452.1;locus_tag=AL42_RS15380;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_003901293.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2168440 2170959 . + . ID=gene-AL42_RS15385;Name=AL42_RS15385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15385;old_locus_tag=AL42_01986 NZ_KK316784.1 Protein Homology CDS 2168440 2170959 . + 0 ID=cds-WP_031721818.1;Parent=gene-AL42_RS15385;Dbxref=GenBank:WP_031721818.1;Name=WP_031721818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216453.1;locus_tag=AL42_RS15385;product=FAD-binding oxidoreductase;protein_id=WP_031721818.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2170971 2172041 . + . ID=gene-AL42_RS15390;Name=ephB;gbkey=Gene;gene=ephB;gene_biotype=protein_coding;locus_tag=AL42_RS15390;old_locus_tag=AL42_01987 NZ_KK316784.1 Protein Homology CDS 2170971 2172041 . + 0 ID=cds-WP_003902252.1;Parent=gene-AL42_RS15390;Dbxref=GenBank:WP_003902252.1;Name=WP_003902252.1;gbkey=CDS;gene=ephB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216454.1;locus_tag=AL42_RS15390;product=epoxide hydrolase EphB;protein_id=WP_003902252.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2172038 2172553 . + . ID=gene-AL42_RS15395;Name=AL42_RS15395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15395;old_locus_tag=AL42_01988 NZ_KK316784.1 Protein Homology CDS 2172038 2172553 . + 0 ID=cds-WP_003409718.1;Parent=gene-AL42_RS15395;Dbxref=GenBank:WP_003409718.1;Name=WP_003409718.1;Ontology_term=GO:0010181,GO:0016491,GO:0016646;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,oxidoreductase activity%2C acting on the CH-NH group of donors%2C NAD or NADP as acceptor|0016646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216455.1;locus_tag=AL42_RS15395;product=flavin reductase family protein;protein_id=WP_003409718.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2172550 2173611 . + . ID=gene-AL42_RS15400;Name=AL42_RS15400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15400;old_locus_tag=AL42_01989 NZ_KK316784.1 Protein Homology CDS 2172550 2173611 . + 0 ID=cds-WP_003899092.1;Parent=gene-AL42_RS15400;Dbxref=GenBank:WP_003899092.1;Name=WP_003899092.1;Ontology_term=GO:0008686;gbkey=CDS;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177851.1;locus_tag=AL42_RS15400;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_003899092.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2173608 2174378 . + . ID=gene-AL42_RS15405;Name=AL42_RS15405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15405;old_locus_tag=AL42_01990 NZ_KK316784.1 Protein Homology CDS 2173608 2174378 . + 0 ID=cds-WP_003409775.1;Parent=gene-AL42_RS15405;Dbxref=GenBank:WP_003409775.1;Name=WP_003409775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216457.1;locus_tag=AL42_RS15405;product=SDR family oxidoreductase;protein_id=WP_003409775.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2174588 2174917 . - . ID=gene-AL42_RS15410;Name=AL42_RS15410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15410;old_locus_tag=AL42_01991 NZ_KK316784.1 Protein Homology CDS 2174588 2174917 . - 0 ID=cds-WP_003409778.1;Parent=gene-AL42_RS15410;Dbxref=GenBank:WP_003409778.1;Name=WP_003409778.1;Ontology_term=GO:0006402,GO:0016075,GO:0003677,GO:0003723,GO:0004521;gbkey=CDS;go_function=DNA binding|0003677||IEA,RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;go_process=mRNA catabolic process|0006402||IEA,rRNA catabolic process|0016075||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216458.1;locus_tag=AL42_RS15410;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=WP_003409778.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2174914 2175291 . - . ID=gene-AL42_RS25960;Name=mazE5;gbkey=Gene;gene=mazE5;gene_biotype=protein_coding;locus_tag=AL42_RS25960;old_locus_tag=AL42_01992 NZ_KK316784.1 Protein Homology CDS 2174914 2175291 . - 0 ID=cds-WP_003409780.1;Parent=gene-AL42_RS25960;Dbxref=GenBank:WP_003409780.1;Name=WP_003409780.1;gbkey=CDS;gene=mazE5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216459.1;locus_tag=AL42_RS25960;product=type II toxin-antitoxin system antitoxin MazE5;protein_id=WP_003409780.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2175288 2175878 . - . ID=gene-AL42_RS15415;Name=AL42_RS15415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15415;old_locus_tag=AL42_01993 NZ_KK316784.1 Protein Homology CDS 2175288 2175878 . - 0 ID=cds-WP_003409784.1;Parent=gene-AL42_RS15415;Dbxref=GenBank:WP_003409784.1;Name=WP_003409784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216460.1;locus_tag=AL42_RS15415;product=SEC-C domain-containing protein;protein_id=WP_003409784.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2175933 2177297 . + . ID=gene-AL42_RS15420;Name=AL42_RS15420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15420;old_locus_tag=AL42_01994 NZ_KK316784.1 Protein Homology CDS 2175933 2177297 . + 0 ID=cds-WP_003903691.1;Parent=gene-AL42_RS15420;Dbxref=GenBank:WP_003903691.1;Name=WP_003903691.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216461.1;locus_tag=AL42_RS15420;product=HNH endonuclease signature motif containing protein;protein_id=WP_003903691.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2177452 2177904 . - . ID=gene-AL42_RS15425;Name=lppG;gbkey=Gene;gene=lppG;gene_biotype=protein_coding;locus_tag=AL42_RS15425;old_locus_tag=AL42_01995 NZ_KK316784.1 Protein Homology CDS 2177452 2177904 . - 0 ID=cds-WP_003899095.1;Parent=gene-AL42_RS15425;Dbxref=GenBank:WP_003899095.1;Name=WP_003899095.1;gbkey=CDS;gene=lppG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216462.1;locus_tag=AL42_RS15425;product=lipoprotein;protein_id=WP_003899095.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2177968 2178369 . + . ID=gene-AL42_RS15430;Name=AL42_RS15430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15430;old_locus_tag=AL42_01996 NZ_KK316784.1 Protein Homology CDS 2177968 2178369 . + 0 ID=cds-WP_003409869.1;Parent=gene-AL42_RS15430;Dbxref=GenBank:WP_003409869.1;Name=WP_003409869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216463.1;locus_tag=AL42_RS15430;product=hypothetical protein;protein_id=WP_003409869.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2178362 2178544 . - . ID=gene-AL42_RS0104885;Name=AL42_RS0104885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0104885 NZ_KK316784.1 Protein Homology CDS 2178362 2178544 . - 0 ID=cds-WP_003409870.1;Parent=gene-AL42_RS0104885;Dbxref=GenBank:WP_003409870.1;Name=WP_003409870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003409870.1;locus_tag=AL42_RS0104885;product=hypothetical protein;protein_id=WP_003409870.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2178658 2179008 . - . ID=gene-AL42_RS15435;Name=AL42_RS15435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15435;old_locus_tag=AL42_01997 NZ_KK316784.1 Protein Homology CDS 2178658 2179008 . - 0 ID=cds-WP_003409871.1;Parent=gene-AL42_RS15435;Dbxref=GenBank:WP_003409871.1;Name=WP_003409871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216464.1;locus_tag=AL42_RS15435;product=hypothetical protein;protein_id=WP_003409871.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2179019 2179921 . - . ID=gene-AL42_RS15440;Name=AL42_RS15440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15440;old_locus_tag=AL42_01998 NZ_KK316784.1 Protein Homology CDS 2179019 2179921 . - 0 ID=cds-WP_003899097.1;Parent=gene-AL42_RS15440;Dbxref=GenBank:WP_003899097.1;Name=WP_003899097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003409874.1;locus_tag=AL42_RS15440;product=hypothetical protein;protein_id=WP_003899097.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2179942 2180133 . - . ID=gene-AL42_RS15445;Name=AL42_RS15445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15445;old_locus_tag=AL42_01999 NZ_KK316784.1 Protein Homology CDS 2179942 2180133 . - 0 ID=cds-WP_003409876.1;Parent=gene-AL42_RS15445;Dbxref=GenBank:WP_003409876.1;Name=WP_003409876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216466.1;locus_tag=AL42_RS15445;product=hypothetical protein;protein_id=WP_003409876.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2180134 2180430 . - . ID=gene-AL42_RS15450;Name=AL42_RS15450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15450;old_locus_tag=AL42_02000 NZ_KK316784.1 Protein Homology CDS 2180134 2180430 . - 0 ID=cds-WP_003409877.1;Parent=gene-AL42_RS15450;Dbxref=GenBank:WP_003409877.1;Name=WP_003409877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216467.1;locus_tag=AL42_RS15450;product=hypothetical protein;protein_id=WP_003409877.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2180670 2180885 . + . ID=gene-AL42_RS15455;Name=AL42_RS15455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15455;old_locus_tag=AL42_02001 NZ_KK316784.1 Protein Homology CDS 2180670 2180885 . + 0 ID=cds-WP_003409878.1;Parent=gene-AL42_RS15455;Dbxref=GenBank:WP_003409878.1;Name=WP_003409878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216468.1;locus_tag=AL42_RS15455;product=FitA-like ribbon-helix-helix domain-containing protein;protein_id=WP_003409878.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2180882 2181193 . + . ID=gene-AL42_RS15460;Name=AL42_RS15460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15460;old_locus_tag=AL42_02002 NZ_KK316784.1 GeneMarkS-2+ CDS 2180882 2181193 . + 0 ID=cds-WP_003409881.1;Parent=gene-AL42_RS15460;Dbxref=GenBank:WP_003409881.1;Name=WP_003409881.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL42_RS15460;product=PIN domain-containing protein;protein_id=WP_003409881.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2181167 2181688 . - . ID=gene-AL42_RS27205;Name=AL42_RS27205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27205;old_locus_tag=AL42_02003 NZ_KK316784.1 Protein Homology CDS 2181167 2181688 . - 0 ID=cds-WP_003904745.1;Parent=gene-AL42_RS27205;Dbxref=GenBank:WP_003904745.1;Name=WP_003904745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216470.1;locus_tag=AL42_RS27205;product=hypothetical protein;protein_id=WP_003904745.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2181663 2182040 . + . ID=gene-AL42_RS15465;Name=higB;gbkey=Gene;gene=higB;gene_biotype=protein_coding;locus_tag=AL42_RS15465;old_locus_tag=AL42_02005 NZ_KK316784.1 Protein Homology CDS 2181663 2182040 . + 0 ID=cds-WP_010886136.1;Parent=gene-AL42_RS15465;Dbxref=GenBank:WP_010886136.1;Name=WP_010886136.1;gbkey=CDS;gene=higB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216471.2;locus_tag=AL42_RS15465;product=type II toxin-antitoxin system toxin HigB;protein_id=WP_010886136.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2182082 2182531 . + . ID=gene-AL42_RS15470;Name=higA;gbkey=Gene;gene=higA;gene_biotype=protein_coding;locus_tag=AL42_RS15470;old_locus_tag=AL42_02006 NZ_KK316784.1 Protein Homology CDS 2182082 2182531 . + 0 ID=cds-WP_003409886.1;Parent=gene-AL42_RS15470;Dbxref=GenBank:WP_003409886.1;Name=WP_003409886.1;gbkey=CDS;gene=higA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216472.1;locus_tag=AL42_RS15470;product=type II toxin-antitoxin system antitoxin HigA;protein_id=WP_003409886.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2182528 2183073 . + . ID=gene-AL42_RS15475;Name=AL42_RS15475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15475;old_locus_tag=AL42_02007 NZ_KK316784.1 Protein Homology CDS 2182528 2183073 . + 0 ID=cds-WP_003409891.1;Parent=gene-AL42_RS15475;Dbxref=GenBank:WP_003409891.1;Name=WP_003409891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216473.1;locus_tag=AL42_RS15475;product=SecB-like chaperone SecBL;protein_id=WP_003409891.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2182962 2183576 . - . ID=gene-AL42_RS15480;Name=AL42_RS15480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15480;old_locus_tag=AL42_02008 NZ_KK316784.1 Protein Homology CDS 2182962 2183576 . - 0 ID=cds-WP_003901296.1;Parent=gene-AL42_RS15480;Dbxref=GenBank:WP_003901296.1;Name=WP_003901296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216474.1;locus_tag=AL42_RS15480;product=hypothetical protein;protein_id=WP_003901296.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2183625 2183921 . - . ID=gene-AL42_RS15485;Name=AL42_RS15485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15485;old_locus_tag=AL42_02009 NZ_KK316784.1 Protein Homology CDS 2183625 2183921 . - 0 ID=cds-WP_003409896.1;Parent=gene-AL42_RS15485;Dbxref=GenBank:WP_003409896.1;Name=WP_003409896.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216475.1;locus_tag=AL42_RS15485;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_003409896.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2183918 2184169 . - . ID=gene-AL42_RS15490;Name=AL42_RS15490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15490;old_locus_tag=AL42_02010 NZ_KK316784.1 Protein Homology CDS 2183918 2184169 . - 0 ID=cds-WP_003409899.1;Parent=gene-AL42_RS15490;Dbxref=GenBank:WP_003409899.1;Name=WP_003409899.1;Ontology_term=GO:0051983;gbkey=CDS;go_process=regulation of chromosome segregation|0051983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216476.1;locus_tag=AL42_RS15490;product=type II toxin-antitoxin system ParD family antitoxin;protein_id=WP_003409899.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2184156 2184650 . + . ID=gene-AL42_RS15495;Name=AL42_RS15495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15495;old_locus_tag=AL42_02011 NZ_KK316784.1 Protein Homology CDS 2184156 2184650 . + 0 ID=cds-WP_003899099.1;Parent=gene-AL42_RS15495;Dbxref=GenBank:WP_003899099.1;Name=WP_003899099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216477.1;locus_tag=AL42_RS15495;product=hypothetical protein;protein_id=WP_003899099.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2184810 2185217 . - . ID=gene-AL42_RS15500;Name=AL42_RS15500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15500;old_locus_tag=AL42_02012 NZ_KK316784.1 Protein Homology CDS 2184810 2185217 . - 0 ID=cds-WP_003409913.1;Parent=gene-AL42_RS15500;Dbxref=GenBank:WP_003409913.1;Name=WP_003409913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216478.1;locus_tag=AL42_RS15500;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003409913.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2185221 2185493 . - . ID=gene-AL42_RS15505;Name=AL42_RS15505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15505;old_locus_tag=AL42_02013 NZ_KK316784.1 Protein Homology CDS 2185221 2185493 . - 0 ID=cds-WP_003899100.1;Parent=gene-AL42_RS15505;Dbxref=GenBank:WP_003899100.1;Name=WP_003899100.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007410641.1;locus_tag=AL42_RS15505;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_003899100.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2185526 2186746 . - . ID=gene-AL42_RS15510;Name=mce3R;gbkey=Gene;gene=mce3R;gene_biotype=protein_coding;locus_tag=AL42_RS15510;old_locus_tag=AL42_02014 NZ_KK316784.1 Protein Homology CDS 2185526 2186746 . - 0 ID=cds-WP_003409919.1;Parent=gene-AL42_RS15510;Dbxref=GenBank:WP_003409919.1;Name=WP_003409919.1;gbkey=CDS;gene=mce3R;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216479.1;locus_tag=AL42_RS15510;product=TetR family transcriptional regulator Mce3R;protein_id=WP_003409919.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2187645 2188442 . + . ID=gene-AL42_RS15515;Name=AL42_RS15515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15515;old_locus_tag=AL42_02015 NZ_KK316784.1 Protein Homology CDS 2187645 2188442 . + 0 ID=cds-WP_003899101.1;Parent=gene-AL42_RS15515;Dbxref=GenBank:WP_003899101.1;Name=WP_003899101.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216480.1;locus_tag=AL42_RS15515;product=MlaE family ABC transporter permease;protein_id=WP_003899101.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2188452 2189267 . + . ID=gene-AL42_RS15520;Name=AL42_RS15520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15520;old_locus_tag=AL42_02016 NZ_KK316784.1 Protein Homology CDS 2188452 2189267 . + 0 ID=cds-WP_003899102.1;Parent=gene-AL42_RS15520;Dbxref=GenBank:WP_003899102.1;Name=WP_003899102.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216481.1;locus_tag=AL42_RS15520;product=ABC transporter permease;protein_id=WP_003899102.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2189272 2190549 . + . ID=gene-AL42_RS15525;Name=AL42_RS15525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15525;old_locus_tag=AL42_02017 NZ_KK316784.1 Protein Homology CDS 2189272 2190549 . + 0 ID=cds-WP_003901299.1;Parent=gene-AL42_RS15525;Dbxref=GenBank:WP_003901299.1;Name=WP_003901299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177852.1;locus_tag=AL42_RS15525;product=MCE family protein;protein_id=WP_003901299.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2190546 2191574 . + . ID=gene-AL42_RS15530;Name=AL42_RS15530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15530;old_locus_tag=AL42_02018 NZ_KK316784.1 Protein Homology CDS 2190546 2191574 . + 0 ID=cds-WP_003899104.1;Parent=gene-AL42_RS15530;Dbxref=GenBank:WP_003899104.1;Name=WP_003899104.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216483.1;locus_tag=AL42_RS15530;product=virulence factor Mce family protein;protein_id=WP_003899104.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2191571 2192803 . + . ID=gene-AL42_RS15535;Name=AL42_RS15535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15535;old_locus_tag=AL42_02019 NZ_KK316784.1 Protein Homology CDS 2191571 2192803 . + 0 ID=cds-WP_003904746.1;Parent=gene-AL42_RS15535;Dbxref=GenBank:WP_003904746.1;Name=WP_003904746.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216484.1;locus_tag=AL42_RS15535;product=virulence factor Mce family protein;protein_id=WP_003904746.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2192800 2194071 . + . ID=gene-AL42_RS15540;Name=AL42_RS15540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15540;old_locus_tag=AL42_02020 NZ_KK316784.1 Protein Homology CDS 2192800 2194071 . + 0 ID=cds-WP_003899106.1;Parent=gene-AL42_RS15540;Dbxref=GenBank:WP_003899106.1;Name=WP_003899106.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216485.1;locus_tag=AL42_RS15540;product=virulence factor Mce family protein;protein_id=WP_003899106.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2194068 2195201 . + . ID=gene-AL42_RS15545;Name=lprM;gbkey=Gene;gene=lprM;gene_biotype=protein_coding;locus_tag=AL42_RS15545;old_locus_tag=AL42_02021 NZ_KK316784.1 Protein Homology CDS 2194068 2195201 . + 0 ID=cds-WP_003899107.1;Parent=gene-AL42_RS15545;Dbxref=GenBank:WP_003899107.1;Name=WP_003899107.1;gbkey=CDS;gene=lprM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216486.1;locus_tag=AL42_RS15545;product=Mce family lipoprotein LprM;protein_id=WP_003899107.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2195202 2196515 . + . ID=gene-AL42_RS15550;Name=AL42_RS15550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15550;old_locus_tag=AL42_02022 NZ_KK316784.1 Protein Homology CDS 2195202 2196515 . + 0 ID=cds-WP_003899108.1;Parent=gene-AL42_RS15550;Dbxref=GenBank:WP_003899108.1;Name=WP_003899108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216487.1;locus_tag=AL42_RS15550;product=MCE family protein;protein_id=WP_003899108.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2196537 2197112 . + . ID=gene-AL42_RS15555;Name=AL42_RS15555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15555;old_locus_tag=AL42_02023 NZ_KK316784.1 Protein Homology CDS 2196537 2197112 . + 0 ID=cds-WP_003905711.1;Parent=gene-AL42_RS15555;Dbxref=GenBank:WP_003905711.1;Name=WP_003905711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216488.1;locus_tag=AL42_RS15555;product=hypothetical protein;protein_id=WP_003905711.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2197109 2197591 . + . ID=gene-AL42_RS15560;Name=AL42_RS15560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15560;old_locus_tag=AL42_02024 NZ_KK316784.1 Protein Homology CDS 2197109 2197591 . + 0 ID=cds-WP_003899110.1;Parent=gene-AL42_RS15560;Dbxref=GenBank:WP_003899110.1;Name=WP_003899110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216489.1;locus_tag=AL42_RS15560;product=Mce associated membrane protein;protein_id=WP_003899110.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2197604 2197981 . + . ID=gene-AL42_RS15565;Name=AL42_RS15565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15565;old_locus_tag=AL42_02025 NZ_KK316784.1 Protein Homology CDS 2197604 2197981 . + 0 ID=cds-WP_003899111.1;Parent=gene-AL42_RS15565;Dbxref=GenBank:WP_003899111.1;Name=WP_003899111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216490.1;locus_tag=AL42_RS15565;product=DUF732 domain-containing protein;protein_id=WP_003899111.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2197997 2198662 . + . ID=gene-AL42_RS15570;Name=AL42_RS15570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15570;old_locus_tag=AL42_02026 NZ_KK316784.1 Protein Homology CDS 2197997 2198662 . + 0 ID=cds-WP_003899112.1;Parent=gene-AL42_RS15570;Dbxref=GenBank:WP_003899112.1;Name=WP_003899112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216491.1;locus_tag=AL42_RS15570;product=CAP domain-containing protein;protein_id=WP_003899112.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2198789 2199196 . - . ID=gene-AL42_RS15575;Name=AL42_RS15575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15575;old_locus_tag=AL42_02027 NZ_KK316784.1 Protein Homology CDS 2198789 2199196 . - 0 ID=cds-WP_003899113.1;Parent=gene-AL42_RS15575;Dbxref=GenBank:WP_003899113.1;Name=WP_003899113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216492.1;locus_tag=AL42_RS15575;product=NYN domain-containing protein;protein_id=WP_003899113.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2199259 2199540 . - . ID=gene-AL42_RS15580;Name=AL42_RS15580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15580;old_locus_tag=AL42_02028 NZ_KK316784.1 Protein Homology CDS 2199259 2199540 . - 0 ID=cds-WP_009940633.1;Parent=gene-AL42_RS15580;Dbxref=GenBank:WP_009940633.1;Name=WP_009940633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009940633.1;locus_tag=AL42_RS15580;product=hypothetical protein;protein_id=WP_009940633.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2199667 2199825 . - . ID=gene-AL42_RS27845;Name=AL42_RS27845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27845;old_locus_tag=AL42_02029 NZ_KK316784.1 GeneMarkS-2+ CDS 2199667 2199825 . - 0 ID=cds-WP_269465927.1;Parent=gene-AL42_RS27845;Dbxref=GenBank:WP_269465927.1;Name=WP_269465927.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL42_RS27845;product=hypothetical protein;protein_id=WP_269465927.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2199822 2200313 . - . ID=gene-AL42_RS15585;Name=AL42_RS15585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15585;old_locus_tag=AL42_02030 NZ_KK316784.1 Protein Homology CDS 2199822 2200313 . - 0 ID=cds-WP_003902251.1;Parent=gene-AL42_RS15585;Dbxref=GenBank:WP_003902251.1;Name=WP_003902251.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003902251.1;locus_tag=AL42_RS15585;product=PE family protein;protein_id=WP_003902251.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2201093 2201842 . + . ID=gene-AL42_RS27970;Name=AL42_RS27970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS27970;pseudo=true NZ_KK316784.1 Protein Homology CDS 2201093 2201842 . + 0 ID=cds-AL42_RS27970;Parent=gene-AL42_RS27970;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016719163.1;locus_tag=AL42_RS27970;product=hypothetical protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 2201839 2202585 . + . ID=gene-AL42_RS15590;Name=AL42_RS15590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15590;old_locus_tag=AL42_02033 NZ_KK316784.1 Protein Homology CDS 2201839 2202585 . + 0 ID=cds-WP_003901304.1;Parent=gene-AL42_RS15590;Dbxref=GenBank:WP_003901304.1;Name=WP_003901304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016719162.1;locus_tag=AL42_RS15590;product=hypothetical protein;protein_id=WP_003901304.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2202638 2202907 . - . ID=gene-AL42_RS15595;Name=AL42_RS15595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15595;old_locus_tag=AL42_02034 NZ_KK316784.1 Protein Homology CDS 2202638 2202907 . - 0 ID=cds-WP_003901305.1;Parent=gene-AL42_RS15595;Dbxref=GenBank:WP_003901305.1;Name=WP_003901305.1;Ontology_term=GO:0005525;gbkey=CDS;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014001041.1;locus_tag=AL42_RS15595;product=EF-Tu/IF-2/RF-3 family GTPase;protein_id=WP_003901305.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2202985 2203164 . - . ID=gene-AL42_RS15600;Name=AL42_RS15600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15600;old_locus_tag=AL42_02035 NZ_KK316784.1 GeneMarkS-2+ CDS 2202985 2203164 . - 0 ID=cds-WP_003907830.1;Parent=gene-AL42_RS15600;Dbxref=GenBank:WP_003907830.1;Name=WP_003907830.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL42_RS15600;product=dehydrogenase;protein_id=WP_003907830.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2204194 2205240 . + . ID=gene-AL42_RS15605;Name=AL42_RS15605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15605;old_locus_tag=AL42_02036 NZ_KK316784.1 Protein Homology CDS 2204194 2205240 . + 0 ID=cds-WP_003899114.1;Parent=gene-AL42_RS15605;Dbxref=GenBank:WP_003899114.1;Name=WP_003899114.1;Ontology_term=GO:0006508,GO:0004222,GO:0008237,GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216493.1;locus_tag=AL42_RS15605;product=M48 family metallopeptidase;protein_id=WP_003899114.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2205348 2206196 . + . ID=gene-AL42_RS15610;Name=AL42_RS15610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15610;old_locus_tag=AL42_02037 NZ_KK316784.1 Protein Homology CDS 2205348 2206196 . + 0 ID=cds-WP_003901306.1;Parent=gene-AL42_RS15610;Dbxref=GenBank:WP_003901306.1;Name=WP_003901306.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216494.1;locus_tag=AL42_RS15610;product=class I SAM-dependent methyltransferase;protein_id=WP_003901306.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2206159 2207603 . - . ID=gene-AL42_RS0104925;Name=AL42_RS0104925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS0104925;old_locus_tag=AL42_02038;pseudo=true NZ_KK316784.1 Protein Homology CDS 2206159 2207603 . - 0 ID=cds-AL42_RS0104925;Parent=gene-AL42_RS0104925;Note=frameshifted;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216495.2;locus_tag=AL42_RS0104925;product=APC family permease;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 2207782 2208468 . - . ID=gene-AL42_RS15615;Name=mpt64;gbkey=Gene;gene=mpt64;gene_biotype=protein_coding;locus_tag=AL42_RS15615;old_locus_tag=AL42_02039 NZ_KK316784.1 Protein Homology CDS 2207782 2208468 . - 0 ID=cds-WP_003409954.1;Parent=gene-AL42_RS15615;Dbxref=GenBank:WP_003409954.1;Name=WP_003409954.1;gbkey=CDS;gene=mpt64;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216496.1;locus_tag=AL42_RS15615;product=immunoprotective protein Mpt64;protein_id=WP_003409954.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2208659 2209627 . - . ID=gene-AL42_RS15620;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=AL42_RS15620;old_locus_tag=AL42_02040 NZ_KK316784.1 Protein Homology CDS 2208659 2209627 . - 0 ID=cds-WP_003899116.1;Parent=gene-AL42_RS15620;Dbxref=GenBank:WP_003899116.1;Name=WP_003899116.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177853.1;locus_tag=AL42_RS15620;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_003899116.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2209852 2210271 . - . ID=gene-AL42_RS15625;Name=AL42_RS15625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15625;old_locus_tag=AL42_02041 NZ_KK316784.1 Protein Homology CDS 2209852 2210271 . - 0 ID=cds-WP_003409958.1;Parent=gene-AL42_RS15625;Dbxref=GenBank:WP_003409958.1;Name=WP_003409958.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216498.1;locus_tag=AL42_RS15625;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003409958.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2210280 2210540 . - . ID=gene-AL42_RS15630;Name=AL42_RS15630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15630;old_locus_tag=AL42_02042 NZ_KK316784.1 Protein Homology CDS 2210280 2210540 . - 0 ID=cds-WP_003409968.1;Parent=gene-AL42_RS15630;Dbxref=GenBank:WP_003409968.1;Name=WP_003409968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004837054.1;locus_tag=AL42_RS15630;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_003409968.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2210683 2212359 . + . ID=gene-AL42_RS15635;Name=AL42_RS15635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15635;old_locus_tag=AL42_02043 NZ_KK316784.1 Protein Homology CDS 2210683 2212359 . + 0 ID=cds-WP_003899118.1;Parent=gene-AL42_RS15635;Dbxref=GenBank:WP_003899118.1;Name=WP_003899118.1;Ontology_term=GO:0004190;gbkey=CDS;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177854.1;locus_tag=AL42_RS15635;product=PecA family PE domain-processing aspartic protease;protein_id=WP_003899118.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2212347 2213000 . - . ID=gene-AL42_RS15640;Name=cfp21;gbkey=Gene;gene=cfp21;gene_biotype=protein_coding;locus_tag=AL42_RS15640;old_locus_tag=AL42_02044 NZ_KK316784.1 Protein Homology CDS 2212347 2213000 . - 0 ID=cds-WP_031721819.1;Parent=gene-AL42_RS15640;Dbxref=GenBank:WP_031721819.1;Name=WP_031721819.1;gbkey=CDS;gene=cfp21;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216500.1;locus_tag=AL42_RS15640;product=cutinase Cfp21;protein_id=WP_031721819.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2213115 2213345 . + . ID=gene-AL42_RS15645;Name=AL42_RS15645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15645;old_locus_tag=AL42_02045 NZ_KK316784.1 Protein Homology CDS 2213115 2213345 . + 0 ID=cds-WP_003409980.1;Parent=gene-AL42_RS15645;Dbxref=GenBank:WP_003409980.1;Name=WP_003409980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012394608.1;locus_tag=AL42_RS15645;product=DUF167 domain-containing protein;protein_id=WP_003409980.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2213430 2214341 . - . ID=gene-AL42_RS15650;Name=AL42_RS15650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15650;old_locus_tag=AL42_02046 NZ_KK316784.1 Protein Homology CDS 2213430 2214341 . - 0 ID=cds-WP_003409986.1;Parent=gene-AL42_RS15650;Dbxref=GenBank:WP_003409986.1;Name=WP_003409986.1;Ontology_term=GO:0006351,GO:0008156,GO:0043200,GO:0003677,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA-templated transcription|0006351||IEA,negative regulation of DNA replication|0008156||IEA,response to amino acid|0043200||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216501.1;locus_tag=AL42_RS15650;product=ArgP/LysG family DNA-binding transcriptional regulator;protein_id=WP_003409986.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2214450 2215049 . + . ID=gene-AL42_RS15655;Name=lysE;gbkey=Gene;gene=lysE;gene_biotype=protein_coding;locus_tag=AL42_RS15655;old_locus_tag=AL42_02047 NZ_KK316784.1 Protein Homology CDS 2214450 2215049 . + 0 ID=cds-WP_003910883.1;Parent=gene-AL42_RS15655;Dbxref=GenBank:WP_003910883.1;Name=WP_003910883.1;Ontology_term=GO:0016020;gbkey=CDS;gene=lysE;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216502.1;locus_tag=AL42_RS15655;product=L-lysine exporter;protein_id=WP_003910883.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2215465 2215893 . + . ID=gene-AL42_RS15660;Name=AL42_RS15660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15660;old_locus_tag=AL42_02048 NZ_KK316784.1 Protein Homology CDS 2215465 2215893 . + 0 ID=cds-WP_003409992.1;Parent=gene-AL42_RS15660;Dbxref=GenBank:WP_003409992.1;Name=WP_003409992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216503.1;locus_tag=AL42_RS15660;product=cellulose-binding protein;protein_id=WP_003409992.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2216119 2216658 . + . ID=gene-AL42_RS15665;Name=erm(37);gbkey=Gene;gene=erm(37);gene_biotype=protein_coding;locus_tag=AL42_RS15665;old_locus_tag=AL42_02049 NZ_KK316784.1 Protein Homology CDS 2216119 2216658 . + 0 ID=cds-WP_003900446.1;Parent=gene-AL42_RS15665;Dbxref=GenBank:WP_003900446.1;Name=WP_003900446.1;gbkey=CDS;gene=erm(37);inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900446.1;locus_tag=AL42_RS15665;product=23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(37);protein_id=WP_003900446.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2216838 2217110 . + . ID=gene-AL42_RS27975;Name=AL42_RS27975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27975 NZ_KK316784.1 Protein Homology CDS 2216838 2217110 . + 0 ID=cds-WP_003409997.1;Parent=gene-AL42_RS27975;Dbxref=GenBank:WP_003409997.1;Name=WP_003409997.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013970.6;locus_tag=AL42_RS27975;product=PIN domain-containing protein;protein_id=WP_003409997.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2217178 2217738 . - . ID=gene-AL42_RS15670;Name=AL42_RS15670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15670;old_locus_tag=AL42_02050 NZ_KK316784.1 Protein Homology CDS 2217178 2217738 . - 0 ID=cds-WP_003410001.1;Parent=gene-AL42_RS15670;Dbxref=GenBank:WP_003410001.1;Name=WP_003410001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216505.1;locus_tag=AL42_RS15670;product=RES family NAD+ phosphorylase;protein_id=WP_003410001.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2217735 2218076 . - . ID=gene-AL42_RS15675;Name=AL42_RS15675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15675;old_locus_tag=AL42_02051 NZ_KK316784.1 Protein Homology CDS 2217735 2218076 . - 0 ID=cds-WP_003410003.1;Parent=gene-AL42_RS15675;Dbxref=GenBank:WP_003410003.1;Name=WP_003410003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216506.1;locus_tag=AL42_RS15675;product=antitoxin Xre/MbcA/ParS toxin-binding domain-containing protein;protein_id=WP_003410003.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2218162 2218419 . + . ID=gene-AL42_RS15680;Name=AL42_RS15680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15680 NZ_KK316784.1 Protein Homology CDS 2218162 2218419 . + 0 ID=cds-WP_003410006.1;Parent=gene-AL42_RS15680;Dbxref=GenBank:WP_003410006.1;Name=WP_003410006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917558.1;locus_tag=AL42_RS15680;product=hypothetical protein;protein_id=WP_003410006.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2218568 2218655 . - . ID=gene-AL42_RS28140;Name=AL42_RS28140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS28140;partial=true;pseudo=true;start_range=.,2218568 NZ_KK316784.1 Protein Homology CDS 2218568 2218655 . - 0 ID=cds-AL42_RS28140;Parent=gene-AL42_RS28140;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005191102.1;locus_tag=AL42_RS28140;partial=true;product=dehydrogenase;pseudo=true;start_range=.,2218568;transl_table=11 NZ_KK316784.1 RefSeq gene 2218744 2219088 . - . ID=gene-AL42_RS15690;Name=mazF6;gbkey=Gene;gene=mazF6;gene_biotype=protein_coding;gene_synonym=mazF-mt3;locus_tag=AL42_RS15690;old_locus_tag=AL42_02053 NZ_KK316784.1 Protein Homology CDS 2218744 2219088 . - 0 ID=cds-WP_003410010.1;Parent=gene-AL42_RS15690;Dbxref=GenBank:WP_003410010.1;Name=WP_003410010.1;gbkey=CDS;gene=mazF6;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216507.1;locus_tag=AL42_RS15690;product=type II toxin-antitoxin system toxin endoribonuclease MazF6;protein_id=WP_003410010.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2219082 2219330 . - . ID=gene-AL42_RS15695;Name=AL42_RS15695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15695;old_locus_tag=AL42_02054 NZ_KK316784.1 Protein Homology CDS 2219082 2219330 . - 0 ID=cds-WP_003410014.1;Parent=gene-AL42_RS15695;Dbxref=GenBank:WP_003410014.1;Name=WP_003410014.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007410673.1;locus_tag=AL42_RS15695;product=ribbon-helix-helix domain-containing protein;protein_id=WP_003410014.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2219430 2221745 . - . ID=gene-AL42_RS15700;Name=ctpG;gbkey=Gene;gene=ctpG;gene_biotype=protein_coding;locus_tag=AL42_RS15700;old_locus_tag=AL42_02055 NZ_KK316784.1 Protein Homology CDS 2219430 2221745 . - 0 ID=cds-WP_003899120.1;Parent=gene-AL42_RS15700;Dbxref=GenBank:WP_003899120.1;Name=WP_003899120.1;gbkey=CDS;gene=ctpG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216508.1;locus_tag=AL42_RS15700;product=cation transporter ATPase CptG;protein_id=WP_003899120.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2221742 2222014 . - . ID=gene-AL42_RS15705;Name=AL42_RS15705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15705;old_locus_tag=AL42_02056 NZ_KK316784.1 Protein Homology CDS 2221742 2222014 . - 0 ID=cds-WP_003410017.1;Parent=gene-AL42_RS15705;Dbxref=GenBank:WP_003410017.1;Name=WP_003410017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216509.1;locus_tag=AL42_RS15705;product=DUF1490 family protein;protein_id=WP_003410017.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2222067 2222423 . - . ID=gene-AL42_RS15710;Name=cmtR;gbkey=Gene;gene=cmtR;gene_biotype=protein_coding;locus_tag=AL42_RS15710;old_locus_tag=AL42_02057 NZ_KK316784.1 Protein Homology CDS 2222067 2222423 . - 0 ID=cds-WP_003410018.1;Parent=gene-AL42_RS15710;Dbxref=GenBank:WP_003410018.1;Name=WP_003410018.1;Ontology_term=GO:0006355,GO:0010288,GO:0046686,GO:0003700,GO:0032791,GO:0046870,GO:0097063;gbkey=CDS;gene=cmtR;go_function=DNA-binding transcription factor activity|0003700||IEA,lead ion binding|0032791||IEA,cadmium ion binding|0046870||IEA,cadmium ion sensor activity|0097063||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to lead ion|0010288||IEA,response to cadmium ion|0046686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216510.1;locus_tag=AL42_RS15710;product=Cd(II)/Pb(II)-sensing metalloregulatory transcriptional regulator CmtR;protein_id=WP_003410018.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2222580 2223347 . + . ID=gene-AL42_RS15715;Name=AL42_RS15715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15715;old_locus_tag=AL42_02058 NZ_KK316784.1 Protein Homology CDS 2222580 2223347 . + 0 ID=cds-WP_003410019.1;Parent=gene-AL42_RS15715;Dbxref=GenBank:WP_003410019.1;Name=WP_003410019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216511.1;locus_tag=AL42_RS15715;product=hemerythrin domain-containing protein;protein_id=WP_003410019.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2223443 2224396 . + . ID=gene-AL42_RS15720;Name=AL42_RS15720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15720;old_locus_tag=AL42_02059 NZ_KK316784.1 Protein Homology CDS 2223443 2224396 . + 0 ID=cds-WP_003899121.1;Parent=gene-AL42_RS15720;Dbxref=GenBank:WP_003899121.1;Name=WP_003899121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216512.1;locus_tag=AL42_RS15720;product=universal stress protein;protein_id=WP_003899121.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2224598 2227314 . + . ID=gene-AL42_RS0104935;Name=ctpF;gbkey=Gene;gene=ctpF;gene_biotype=pseudogene;locus_tag=AL42_RS0104935;old_locus_tag=AL42_02060;pseudo=true NZ_KK316784.1 Protein Homology CDS 2224598 2227314 . + 0 ID=cds-AL42_RS0104935;Parent=gene-AL42_RS0104935;Note=frameshifted;gbkey=CDS;gene=ctpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216513.1;locus_tag=AL42_RS0104935;product=cation-transporting P-type ATPase;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 2227383 2228159 . - . ID=gene-AL42_RS15725;Name=AL42_RS15725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15725;old_locus_tag=AL42_02061 NZ_KK316784.1 Protein Homology CDS 2227383 2228159 . - 0 ID=cds-WP_003899122.1;Parent=gene-AL42_RS15725;Dbxref=GenBank:WP_003899122.1;Name=WP_003899122.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216514.1;locus_tag=AL42_RS15725;product=isocitrate lyase/PEP mutase family protein;protein_id=WP_003899122.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2228254 2229576 . - . ID=gene-AL42_RS15730;Name=AL42_RS15730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15730;old_locus_tag=AL42_02062 NZ_KK316784.1 Protein Homology CDS 2228254 2229576 . - 0 ID=cds-WP_003901309.1;Parent=gene-AL42_RS15730;Dbxref=GenBank:WP_003901309.1;Name=WP_003901309.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216515.1;locus_tag=AL42_RS15730;product=APC family permease;protein_id=WP_003901309.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2229647 2231260 . + . ID=gene-AL42_RS15735;Name=AL42_RS15735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15735;old_locus_tag=AL42_02063 NZ_KK316784.1 Protein Homology CDS 2229647 2231260 . + 0 ID=cds-WP_003902248.1;Parent=gene-AL42_RS15735;Dbxref=GenBank:WP_003902248.1;Name=WP_003902248.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216516.1;locus_tag=AL42_RS15735;product=NAD(P)-binding protein;protein_id=WP_003902248.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2231270 2232022 . + . ID=gene-AL42_RS15740;Name=AL42_RS15740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15740;old_locus_tag=AL42_02064 NZ_KK316784.1 Protein Homology CDS 2231270 2232022 . + 0 ID=cds-WP_003900448.1;Parent=gene-AL42_RS15740;Dbxref=GenBank:WP_003900448.1;Name=WP_003900448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216517.1;locus_tag=AL42_RS15740;product=acyl-[acyl-carrier-protein] thioesterase;protein_id=WP_003900448.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2232098 2232880 . + . ID=gene-AL42_RS15745;Name=AL42_RS15745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15745;old_locus_tag=AL42_02065 NZ_KK316784.1 Protein Homology CDS 2232098 2232880 . + 0 ID=cds-WP_031721820.1;Parent=gene-AL42_RS15745;Dbxref=GenBank:WP_031721820.1;Name=WP_031721820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216518.1;locus_tag=AL42_RS15745;product=SDR family oxidoreductase;protein_id=WP_031721820.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2233001 2233690 . - . ID=gene-AL42_RS15750;Name=AL42_RS15750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15750;old_locus_tag=AL42_02066 NZ_KK316784.1 Protein Homology CDS 2233001 2233690 . - 0 ID=cds-WP_003899125.1;Parent=gene-AL42_RS15750;Dbxref=GenBank:WP_003899125.1;Name=WP_003899125.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899125.1;locus_tag=AL42_RS15750;product=class I SAM-dependent methyltransferase;protein_id=WP_003899125.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2233698 2233895 . - . ID=gene-AL42_RS27210;Name=AL42_RS27210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27210 NZ_KK316784.1 Protein Homology CDS 2233698 2233895 . - 0 ID=cds-WP_003410051.1;Parent=gene-AL42_RS27210;Dbxref=GenBank:WP_003410051.1;Name=WP_003410051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003410051.1;locus_tag=AL42_RS27210;product=phosphoenolpyruvate synthase;protein_id=WP_003410051.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2233916 2235412 . - . ID=gene-AL42_RS15755;Name=AL42_RS15755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15755;old_locus_tag=AL42_02067 NZ_KK316784.1 Protein Homology CDS 2233916 2235412 . - 0 ID=cds-WP_003410057.1;Parent=gene-AL42_RS15755;Dbxref=GenBank:WP_003410057.1;Name=WP_003410057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216520.1;locus_tag=AL42_RS15755;product=bifunctional aminoglycoside phosphotransferase/ATP-binding protein;protein_id=WP_003410057.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2235434 2236321 . - . ID=gene-AL42_RS15760;Name=AL42_RS15760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15760;old_locus_tag=AL42_02068 NZ_KK316784.1 Protein Homology CDS 2235434 2236321 . - 0 ID=cds-WP_003410060.1;Parent=gene-AL42_RS15760;Dbxref=GenBank:WP_003410060.1;Name=WP_003410060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216521.1;locus_tag=AL42_RS15760;product=universal stress protein;protein_id=WP_003410060.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2236440 2240423 . + . ID=gene-AL42_RS15765;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=AL42_RS15765;old_locus_tag=AL42_02069 NZ_KK316784.1 Protein Homology CDS 2236440 2240423 . + 0 ID=cds-WP_003410063.1;Parent=gene-AL42_RS15765;Dbxref=GenBank:WP_003410063.1;Name=WP_003410063.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177855.1;locus_tag=AL42_RS15765;product=trehalose-phosphatase;protein_id=WP_003410063.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2240522 2240866 . - . ID=gene-AL42_RS15770;Name=fdxA;gbkey=Gene;gene=fdxA;gene_biotype=protein_coding;locus_tag=AL42_RS15770;old_locus_tag=AL42_02070 NZ_KK316784.1 Protein Homology CDS 2240522 2240866 . - 0 ID=cds-WP_003410065.1;Parent=gene-AL42_RS15770;Dbxref=GenBank:WP_003410065.1;Name=WP_003410065.1;Ontology_term=GO:0009055,GO:0046872;gbkey=CDS;gene=fdxA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216523.1;locus_tag=AL42_RS15770;product=ferredoxin;protein_id=WP_003410065.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2241055 2242224 . - . ID=gene-AL42_RS15775;Name=AL42_RS15775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15775;old_locus_tag=AL42_02071 NZ_KK316784.1 Protein Homology CDS 2241055 2242224 . - 0 ID=cds-WP_003899126.1;Parent=gene-AL42_RS15775;Dbxref=GenBank:WP_003899126.1;Name=WP_003899126.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899126.1;locus_tag=AL42_RS15775;product=ATP-binding protein;protein_id=WP_003899126.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2242483 2242710 . + . ID=gene-AL42_RS15780;Name=AL42_RS15780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15780;old_locus_tag=AL42_02072 NZ_KK316784.1 Protein Homology CDS 2242483 2242710 . + 0 ID=cds-WP_003911750.1;Parent=gene-AL42_RS15780;Dbxref=GenBank:WP_003911750.1;Name=WP_003911750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019283586.1;locus_tag=AL42_RS15780;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_003911750.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2242711 2243109 . + . ID=gene-AL42_RS15785;Name=vapC;gbkey=Gene;gene=vapC;gene_biotype=protein_coding;locus_tag=AL42_RS15785;old_locus_tag=AL42_02073 NZ_KK316784.1 Protein Homology CDS 2242711 2243109 . + 0 ID=cds-WP_003410075.1;Parent=gene-AL42_RS15785;Dbxref=GenBank:WP_003410075.1;Name=WP_003410075.1;Ontology_term=GO:0004518,GO:0110001;gbkey=CDS;gene=vapC;go_component=toxin-antitoxin complex|0110001||IEA;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216526.1;locus_tag=AL42_RS15785;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003410075.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2243292 2243723 . - . ID=gene-AL42_RS15790;Name=AL42_RS15790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15790;old_locus_tag=AL42_02074 NZ_KK316784.1 Protein Homology CDS 2243292 2243723 . - 0 ID=cds-WP_003410078.1;Parent=gene-AL42_RS15790;Dbxref=GenBank:WP_003410078.1;Name=WP_003410078.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216527.1;locus_tag=AL42_RS15790;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_003410078.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2243824 2244258 . + . ID=gene-AL42_RS15795;Name=AL42_RS15795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15795;old_locus_tag=AL42_02075 NZ_KK316784.1 Protein Homology CDS 2243824 2244258 . + 0 ID=cds-WP_003914358.1;Parent=gene-AL42_RS15795;Dbxref=GenBank:WP_003914358.1;Name=WP_003914358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003914358.1;locus_tag=AL42_RS15795;product=DUF1398 domain-containing protein;protein_id=WP_003914358.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2244394 2244653 . - . ID=gene-AL42_RS28145;Name=AL42_RS28145;end_range=2244653,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS28145;partial=true;pseudo=true NZ_KK316784.1 Protein Homology CDS 2244394 2244653 . - 0 ID=cds-AL42_RS28145;Parent=gene-AL42_RS28145;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2244653,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003410139.1;locus_tag=AL42_RS28145;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2244695 2244877 . - . ID=gene-AL42_RS25990;Name=AL42_RS25990;end_range=2244877,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS25990;partial=true;pseudo=true NZ_KK316784.1 Protein Homology CDS 2244695 2244877 . - 0 ID=cds-AL42_RS25990;Parent=gene-AL42_RS25990;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2244877,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217738.1;locus_tag=AL42_RS25990;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2244899 2246126 . + . ID=gene-AL42_RS28150;Name=AL42_RS28150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS28150;pseudo=true NZ_KK316784.1 Protein Homology CDS 2244899 2246126 . + 0 ID=cds-AL42_RS28150;Parent=gene-AL42_RS28150;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007168642.1;locus_tag=AL42_RS28150;product=IS110 family transposase;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 2246254 2247510 . - . ID=gene-AL42_RS15805;Name=AL42_RS15805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15805;old_locus_tag=AL42_02078 NZ_KK316784.1 Protein Homology CDS 2246254 2247510 . - 0 ID=cds-WP_003902247.1;Parent=gene-AL42_RS15805;Dbxref=GenBank:WP_003902247.1;Name=WP_003902247.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216531.1;locus_tag=AL42_RS15805;product=HNH endonuclease signature motif containing protein;protein_id=WP_003902247.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2247864 2248064 . + . ID=gene-AL42_RS0104955;Name=AL42_RS0104955;end_range=2248064,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS0104955;partial=true;pseudo=true NZ_KK316784.1 Protein Homology CDS 2247864 2248064 . + 0 ID=cds-AL42_RS0104955;Parent=gene-AL42_RS0104955;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2248064,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216532.1;locus_tag=AL42_RS0104955;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 2248108 2248493 . - . ID=gene-AL42_RS15810;Name=AL42_RS15810;end_range=2248493,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15810;old_locus_tag=AL42_02079;partial=true NZ_KK316784.1 Protein Homology CDS 2248108 2248493 . - 2 ID=cds-WP_003913693.1;Parent=gene-AL42_RS15810;Dbxref=GenBank:WP_003913693.1;Name=WP_003913693.1;end_range=2248493,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL42_RS15810;partial=true;product=IS3 family transposase;protein_id=WP_003913693.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2248690 2248989 . - . ID=gene-AL42_RS15815;Name=AL42_RS15815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15815;old_locus_tag=AL42_02080;partial=true;start_range=.,2248690 NZ_KK316784.1 Protein Homology CDS 2248690 2248989 . - 0 ID=cds-WP_003917147.1;Parent=gene-AL42_RS15815;Dbxref=GenBank:WP_003917147.1;Name=WP_003917147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL42_RS15815;partial=true;product=IS3 family transposase;protein_id=WP_003917147.1;start_range=.,2248690;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2249040 2249417 . + . ID=gene-AL42_RS15820;Name=AL42_RS15820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS15820;old_locus_tag=AL42_02081;partial=true;pseudo=true;start_range=.,2249040 NZ_KK316784.1 Protein Homology CDS 2249040 2249417 . + 0 ID=cds-AL42_RS15820;Parent=gene-AL42_RS15820;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216532.1;locus_tag=AL42_RS15820;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2249040;transl_table=11 NZ_KK316784.1 RefSeq gene 2249414 2250454 . + . ID=gene-AL42_RS15825;Name=AL42_RS15825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15825;old_locus_tag=AL42_02082 NZ_KK316784.1 Protein Homology CDS 2249414 2250454 . + 0 ID=cds-WP_003410103.1;Parent=gene-AL42_RS15825;Dbxref=GenBank:WP_003410103.1;Name=WP_003410103.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216533.1;locus_tag=AL42_RS15825;product=helix-turn-helix domain-containing protein;protein_id=WP_003410103.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2250696 2251415 . + . ID=gene-AL42_RS15830;Name=AL42_RS15830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15830;old_locus_tag=AL42_02083 NZ_KK316784.1 Protein Homology CDS 2250696 2251415 . + 0 ID=cds-WP_003410108.1;Parent=gene-AL42_RS15830;Dbxref=GenBank:WP_003410108.1;Name=WP_003410108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216534.1;locus_tag=AL42_RS15830;product=Rv2018 family toxin-antitoxin system antitoxin;protein_id=WP_003410108.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2251405 2251821 . + . ID=gene-AL42_RS15835;Name=AL42_RS15835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15835;old_locus_tag=AL42_02084 NZ_KK316784.1 Protein Homology CDS 2251405 2251821 . + 0 ID=cds-WP_003410114.1;Parent=gene-AL42_RS15835;Dbxref=GenBank:WP_003410114.1;Name=WP_003410114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216535.1;locus_tag=AL42_RS15835;product=Rv2019 family toxin-antitoxin system toxin ribonuclease;protein_id=WP_003410114.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2251837 2252136 . - . ID=gene-AL42_RS15840;Name=AL42_RS15840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15840;old_locus_tag=AL42_02085 NZ_KK316784.1 Protein Homology CDS 2251837 2252136 . - 0 ID=cds-WP_003410120.1;Parent=gene-AL42_RS15840;Dbxref=GenBank:WP_003410120.1;Name=WP_003410120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003410120.1;locus_tag=AL42_RS15840;product=type ISP restriction/modification enzyme;protein_id=WP_003410120.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2252221 2252526 . - . ID=gene-AL42_RS15845;Name=AL42_RS15845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15845;old_locus_tag=AL42_02086 NZ_KK316784.1 Protein Homology CDS 2252221 2252526 . - 0 ID=cds-WP_003410124.1;Parent=gene-AL42_RS15845;Dbxref=GenBank:WP_003410124.1;Name=WP_003410124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216537.1;locus_tag=AL42_RS15845;product=helix-turn-helix domain-containing protein;protein_id=WP_003410124.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2252535 2253140 . - . ID=gene-AL42_RS25995;Name=AL42_RS25995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS25995;old_locus_tag=AL42_02087 NZ_KK316784.1 Protein Homology CDS 2252535 2253140 . - 0 ID=cds-WP_003900449.1;Parent=gene-AL42_RS25995;Dbxref=GenBank:WP_003900449.1;Name=WP_003900449.1;Ontology_term=GO:0004519,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216538.1;locus_tag=AL42_RS25995;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_003900449.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2253303 2253581 . - . ID=gene-AL42_RS28155;Name=AL42_RS28155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS28155;partial=true;pseudo=true;start_range=.,2253303 NZ_KK316784.1 Protein Homology CDS 2253303 2253581 . - 0 ID=cds-AL42_RS28155;Parent=gene-AL42_RS28155;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_374101691.1;locus_tag=AL42_RS28155;partial=true;product=IS1380 family transposase;pseudo=true;start_range=.,2253303;transl_table=11 NZ_KK316784.1 RefSeq gene 2253684 2254361 . - . ID=gene-AL42_RS15860;Name=AL42_RS15860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15860;old_locus_tag=AL42_02089 NZ_KK316784.1 Protein Homology CDS 2253684 2254361 . - 0 ID=cds-WP_003905725.1;Parent=gene-AL42_RS15860;Dbxref=GenBank:WP_003905725.1;Name=WP_003905725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003904758.1;locus_tag=AL42_RS15860;product=hypothetical protein;protein_id=WP_003905725.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2254313 2254549 . - . ID=gene-AL42_RS15865;Name=AL42_RS15865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15865;old_locus_tag=AL42_02090 NZ_KK316784.1 Protein Homology CDS 2254313 2254549 . - 0 ID=cds-WP_003410133.1;Parent=gene-AL42_RS15865;Dbxref=GenBank:WP_003410133.1;Name=WP_003410133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003410133.1;locus_tag=AL42_RS15865;product=hypothetical protein;protein_id=WP_003410133.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2254756 2255652 . - . ID=gene-AL42_RS15870;Name=AL42_RS15870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15870;old_locus_tag=AL42_02091 NZ_KK316784.1 Protein Homology CDS 2254756 2255652 . - 0 ID=cds-WP_003410136.1;Parent=gene-AL42_RS15870;Dbxref=GenBank:WP_003410136.1;Name=WP_003410136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917565.1;locus_tag=AL42_RS15870;product=hypothetical protein;protein_id=WP_003410136.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2255836 2260656 . - . ID=gene-AL42_RS15875;Name=AL42_RS15875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15875;old_locus_tag=AL42_02092 NZ_KK316784.1 Protein Homology CDS 2255836 2260656 . - 0 ID=cds-WP_003900451.1;Parent=gene-AL42_RS15875;Dbxref=GenBank:WP_003900451.1;Name=WP_003900451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003410139.1;locus_tag=AL42_RS15875;product=DEAD/DEAH box helicase;protein_id=WP_003900451.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2260959 2261192 . + . ID=gene-AL42_RS28160;Name=AL42_RS28160;end_range=2261192,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS28160;partial=true;pseudo=true;start_range=.,2260959 NZ_KK316784.1 Protein Homology CDS 2260959 2261192 . + 0 ID=cds-AL42_RS28160;Parent=gene-AL42_RS28160;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2261192,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611777.1;locus_tag=AL42_RS28160;partial=true;product=IS3-like element ISMysp3 family transposase;pseudo=true;start_range=.,2260959;transl_table=11 NZ_KK316784.1 RefSeq gene 2261166 2262164 . - . ID=gene-AL42_RS15880;Name=AL42_RS15880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15880;old_locus_tag=AL42_02094 NZ_KK316784.1 Protein Homology CDS 2261166 2262164 . - 0 ID=cds-WP_003410146.1;Parent=gene-AL42_RS15880;Dbxref=GenBank:WP_003410146.1;Name=WP_003410146.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216541.1;locus_tag=AL42_RS15880;product=cation diffusion facilitator family transporter;protein_id=WP_003410146.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2262279 2263163 . - . ID=gene-AL42_RS15885;Name=AL42_RS15885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15885;old_locus_tag=AL42_02095 NZ_KK316784.1 Protein Homology CDS 2262279 2263163 . - 0 ID=cds-WP_003410150.1;Parent=gene-AL42_RS15885;Dbxref=GenBank:WP_003410150.1;Name=WP_003410150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216542.1;locus_tag=AL42_RS15885;product=universal stress protein;protein_id=WP_003410150.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2263203 2264923 . - . ID=gene-AL42_RS27215;Name=dosT;gbkey=Gene;gene=dosT;gene_biotype=pseudogene;locus_tag=AL42_RS27215;pseudo=true NZ_KK316784.1 Protein Homology CDS 2263203 2264923 . - 0 ID=cds-AL42_RS27215;Parent=gene-AL42_RS27215;Note=frameshifted;gbkey=CDS;gene=dosT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216543.1;locus_tag=AL42_RS27215;product=two-component system sensor histidine kinase DosT;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 2264984 2265823 . - . ID=gene-AL42_RS15890;Name=AL42_RS15890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15890;old_locus_tag=AL42_02097 NZ_KK316784.1 Protein Homology CDS 2264984 2265823 . - 0 ID=cds-WP_003410171.1;Parent=gene-AL42_RS15890;Dbxref=GenBank:WP_003410171.1;Name=WP_003410171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216544.1;locus_tag=AL42_RS15890;product=universal stress protein;protein_id=WP_003410171.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2265820 2266839 . - . ID=gene-AL42_RS15895;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=AL42_RS15895;old_locus_tag=AL42_02098 NZ_KK316784.1 Protein Homology CDS 2265820 2266839 . - 0 ID=cds-WP_003899139.1;Parent=gene-AL42_RS15895;Dbxref=GenBank:WP_003899139.1;Name=WP_003899139.1;Ontology_term=GO:0016310,GO:0005524,GO:0008443;gbkey=CDS;gene=pfkB;go_function=ATP binding|0005524||IEA,phosphofructokinase activity|0008443||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216545.1;locus_tag=AL42_RS15895;product=1-phosphofructokinase family hexose kinase;protein_id=WP_003899139.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2266856 2268901 . - . ID=gene-AL42_RS15900;Name=AL42_RS15900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15900;old_locus_tag=AL42_02099 NZ_KK316784.1 Protein Homology CDS 2266856 2268901 . - 0 ID=cds-WP_003410178.1;Parent=gene-AL42_RS15900;Dbxref=GenBank:WP_003410178.1;Name=WP_003410178.1;Ontology_term=GO:0046677;gbkey=CDS;go_process=response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216546.1;locus_tag=AL42_RS15900;product=erythromycin esterase family protein;protein_id=WP_003410178.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2268913 2269347 . - . ID=gene-AL42_RS15905;Name=hspX;gbkey=Gene;gene=hspX;gene_biotype=protein_coding;gene_synonym=acr;locus_tag=AL42_RS15905;old_locus_tag=AL42_02100 NZ_KK316784.1 Protein Homology CDS 2268913 2269347 . - 0 ID=cds-WP_003410189.1;Parent=gene-AL42_RS15905;Dbxref=GenBank:WP_003410189.1;Name=WP_003410189.1;gbkey=CDS;gene=hspX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216547.1;locus_tag=AL42_RS15905;product=alpha-crystallin HspX;protein_id=WP_003410189.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2269544 2270539 . + . ID=gene-AL42_RS15910;Name=acg;gbkey=Gene;gene=acg;gene_biotype=protein_coding;locus_tag=AL42_RS15910;old_locus_tag=AL42_02101 NZ_KK316784.1 Protein Homology CDS 2269544 2270539 . + 0 ID=cds-WP_003410193.1;Parent=gene-AL42_RS15910;Dbxref=GenBank:WP_003410193.1;Name=WP_003410193.1;gbkey=CDS;gene=acg;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216548.1;locus_tag=AL42_RS15910;product=FMN-binding protein Acg;protein_id=WP_003410193.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2270655 2271497 . - . ID=gene-AL42_RS15915;Name=AL42_RS15915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15915;old_locus_tag=AL42_02102 NZ_KK316784.1 Protein Homology CDS 2270655 2271497 . - 0 ID=cds-WP_003410196.1;Parent=gene-AL42_RS15915;Dbxref=GenBank:WP_003410196.1;Name=WP_003410196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216549.1;locus_tag=AL42_RS15915;product=DUF3097 domain-containing protein;protein_id=WP_003410196.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2271709 2272032 . + . ID=gene-AL42_RS15920;Name=AL42_RS15920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15920;old_locus_tag=AL42_02103 NZ_KK316784.1 Protein Homology CDS 2271709 2272032 . + 0 ID=cds-WP_003410200.1;Parent=gene-AL42_RS15920;Dbxref=GenBank:WP_003410200.1;Name=WP_003410200.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216550.1;locus_tag=AL42_RS15920;product=ArsR/SmtB family transcription factor;protein_id=WP_003410200.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2272029 2272517 . + . ID=gene-AL42_RS15925;Name=AL42_RS15925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15925;old_locus_tag=AL42_02104 NZ_KK316784.1 Protein Homology CDS 2272029 2272517 . + 0 ID=cds-WP_003899141.1;Parent=gene-AL42_RS15925;Dbxref=GenBank:WP_003899141.1;Name=WP_003899141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216551.1;locus_tag=AL42_RS15925;product=SRPBCC family protein;protein_id=WP_003899141.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2272514 2273155 . + . ID=gene-AL42_RS15930;Name=AL42_RS15930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15930;old_locus_tag=AL42_02105 NZ_KK316784.1 Protein Homology CDS 2272514 2273155 . + 0 ID=cds-WP_003899142.1;Parent=gene-AL42_RS15930;Dbxref=GenBank:WP_003899142.1;Name=WP_003899142.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216552.1;locus_tag=AL42_RS15930;product=maleylpyruvate isomerase family mycothiol-dependent enzyme;protein_id=WP_003899142.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2273162 2274136 . - . ID=gene-AL42_RS15935;Name=AL42_RS15935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15935;old_locus_tag=AL42_02106 NZ_KK316784.1 Protein Homology CDS 2273162 2274136 . - 0 ID=cds-WP_003410214.1;Parent=gene-AL42_RS15935;Dbxref=GenBank:WP_003410214.1;Name=WP_003410214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216553.1;locus_tag=AL42_RS15935;product=patatin-like phospholipase family protein;protein_id=WP_003410214.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2274138 2275211 . - . ID=gene-AL42_RS15940;Name=AL42_RS15940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15940;old_locus_tag=AL42_02107 NZ_KK316784.1 Protein Homology CDS 2274138 2275211 . - 0 ID=cds-WP_003410218.1;Parent=gene-AL42_RS15940;Dbxref=GenBank:WP_003410218.1;Name=WP_003410218.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216554.1;locus_tag=AL42_RS15940;product=ABC transporter ATP-binding protein;protein_id=WP_003410218.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2275214 2276056 . - . ID=gene-AL42_RS15945;Name=AL42_RS15945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15945;old_locus_tag=AL42_02108 NZ_KK316784.1 Protein Homology CDS 2275214 2276056 . - 0 ID=cds-WP_003410221.1;Parent=gene-AL42_RS15945;Dbxref=GenBank:WP_003410221.1;Name=WP_003410221.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216555.1;locus_tag=AL42_RS15945;product=carbohydrate ABC transporter permease;protein_id=WP_003410221.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2276043 2276945 . - . ID=gene-AL42_RS15950;Name=AL42_RS15950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15950;old_locus_tag=AL42_02109 NZ_KK316784.1 Protein Homology CDS 2276043 2276945 . - 0 ID=cds-WP_003410224.1;Parent=gene-AL42_RS15950;Dbxref=GenBank:WP_003410224.1;Name=WP_003410224.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216556.1;locus_tag=AL42_RS15950;product=carbohydrate ABC transporter permease;protein_id=WP_003410224.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2276942 2278261 . - . ID=gene-AL42_RS15955;Name=AL42_RS15955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15955;old_locus_tag=AL42_02110 NZ_KK316784.1 Protein Homology CDS 2276942 2278261 . - 0 ID=cds-WP_003410228.1;Parent=gene-AL42_RS15955;Dbxref=GenBank:WP_003410228.1;Name=WP_003410228.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216557.1;locus_tag=AL42_RS15955;product=ABC transporter substrate-binding protein;protein_id=WP_003410228.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2278299 2279096 . - . ID=gene-AL42_RS15960;Name=AL42_RS15960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15960;old_locus_tag=AL42_02111 NZ_KK316784.1 Protein Homology CDS 2278299 2279096 . - 0 ID=cds-WP_003899143.1;Parent=gene-AL42_RS15960;Dbxref=GenBank:WP_003899143.1;Name=WP_003899143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216558.1;locus_tag=AL42_RS15960;product=ketosteroid isomerase family protein;protein_id=WP_003899143.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2279096 2279656 . - . ID=gene-AL42_RS15965;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=AL42_RS15965;old_locus_tag=AL42_02112 NZ_KK316784.1 Protein Homology CDS 2279096 2279656 . - 0 ID=cds-WP_003410243.1;Parent=gene-AL42_RS15965;Dbxref=GenBank:WP_003410243.1;Name=WP_003410243.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216559.1;locus_tag=AL42_RS15965;product=pyrazinamidase PncA;protein_id=WP_003410243.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2279697 2280047 . - . ID=gene-AL42_RS15970;Name=AL42_RS15970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15970;old_locus_tag=AL42_02113 NZ_KK316784.1 Protein Homology CDS 2279697 2280047 . - 0 ID=cds-WP_003902241.1;Parent=gene-AL42_RS15970;Dbxref=GenBank:WP_003902241.1;Name=WP_003902241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003902241.1;locus_tag=AL42_RS15970;product=DUF2784 domain-containing protein;protein_id=WP_003902241.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2280100 2281605 . - . ID=gene-AL42_RS15975;Name=lipT;gbkey=Gene;gene=lipT;gene_biotype=protein_coding;locus_tag=AL42_RS15975;old_locus_tag=AL42_02114 NZ_KK316784.1 Protein Homology CDS 2280100 2281605 . - 0 ID=cds-WP_003916923.1;Parent=gene-AL42_RS15975;Dbxref=GenBank:WP_003916923.1;Name=WP_003916923.1;Ontology_term=GO:0016298,GO:0052689;gbkey=CDS;gene=lipT;go_function=lipase activity|0016298||IEA,carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009940658.1;locus_tag=AL42_RS15975;product=carboxylesterase/lipase family protein;protein_id=WP_003916923.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2281684 2282340 . + . ID=gene-AL42_RS15980;Name=AL42_RS15980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15980;old_locus_tag=AL42_02115 NZ_KK316784.1 Protein Homology CDS 2281684 2282340 . + 0 ID=cds-WP_003899146.1;Parent=gene-AL42_RS15980;Dbxref=GenBank:WP_003899146.1;Name=WP_003899146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216562.1;locus_tag=AL42_RS15980;product=hypothetical protein;protein_id=WP_003899146.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2282377 2284941 . - . ID=gene-AL42_RS15985;Name=AL42_RS15985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15985;old_locus_tag=AL42_02116 NZ_KK316784.1 Protein Homology CDS 2282377 2284941 . - 0 ID=cds-WP_003901314.1;Parent=gene-AL42_RS15985;Dbxref=GenBank:WP_003901314.1;Name=WP_003901314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216563.1;locus_tag=AL42_RS15985;product=sugar epimerase family protein;protein_id=WP_003901314.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2284946 2297401 . - . ID=gene-AL42_RS15990;Name=AL42_RS15990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS15990;old_locus_tag=AL42_02117 NZ_KK316784.1 Protein Homology CDS 2284946 2297401 . - 0 ID=cds-WP_009940660.1;Parent=gene-AL42_RS15990;Dbxref=GenBank:WP_009940660.1;Name=WP_009940660.1;Ontology_term=GO:0030639,GO:0034081;gbkey=CDS;go_component=polyketide synthase complex|0034081||IEA;go_process=polyketide biosynthetic process|0030639||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216564.2;locus_tag=AL42_RS15990;product=type I polyketide synthase;protein_id=WP_009940660.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2297708 2298058 . - . ID=gene-AL42_RS27220;Name=AL42_RS27220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27220 NZ_KK316784.1 Protein Homology CDS 2297708 2298058 . - 0 ID=cds-WP_003912718.1;Parent=gene-AL42_RS27220;Dbxref=GenBank:WP_003912718.1;Name=WP_003912718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912718.1;locus_tag=AL42_RS27220;product=hypothetical protein;protein_id=WP_003912718.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2298236 2298571 . + . ID=gene-AL42_RS15995;Name=rbpA;gbkey=Gene;gene=rbpA;gene_biotype=protein_coding;locus_tag=AL42_RS15995;old_locus_tag=AL42_02119 NZ_KK316784.1 Protein Homology CDS 2298236 2298571 . + 0 ID=cds-WP_003410601.1;Parent=gene-AL42_RS15995;Dbxref=GenBank:WP_003410601.1;Name=WP_003410601.1;gbkey=CDS;gene=rbpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216566.1;locus_tag=AL42_RS15995;product=RNA polymerase-binding protein RbpA;protein_id=WP_003410601.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2298546 2301170 . - . ID=gene-AL42_RS26015;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=AL42_RS26015;old_locus_tag=AL42_02120 NZ_KK316784.1 Protein Homology CDS 2298546 2301170 . - 0 ID=cds-WP_003902238.1;Parent=gene-AL42_RS26015;Dbxref=GenBank:WP_003902238.1;Name=WP_003902238.1;Ontology_term=GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216567.1;locus_tag=AL42_RS26015;product=apolipoprotein N-acyltransferase;protein_id=WP_003902238.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2301328 2302932 . - . ID=gene-AL42_RS16000;Name=AL42_RS16000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16000;old_locus_tag=AL42_02121 NZ_KK316784.1 Protein Homology CDS 2301328 2302932 . - 0 ID=cds-WP_003410605.1;Parent=gene-AL42_RS16000;Dbxref=GenBank:WP_003410605.1;Name=WP_003410605.1;Ontology_term=GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216568.1;locus_tag=AL42_RS16000;product=amidohydrolase;protein_id=WP_003410605.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2302937 2303464 . - . ID=gene-AL42_RS16005;Name=fxsA;gbkey=Gene;gene=fxsA;gene_biotype=protein_coding;locus_tag=AL42_RS16005;old_locus_tag=AL42_02122 NZ_KK316784.1 Protein Homology CDS 2302937 2303464 . - 0 ID=cds-WP_003410608.1;Parent=gene-AL42_RS16005;Dbxref=GenBank:WP_003410608.1;Name=WP_003410608.1;Ontology_term=GO:0005886;gbkey=CDS;gene=fxsA;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216569.1;locus_tag=AL42_RS16005;product=FxsA family protein;protein_id=WP_003410608.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2303540 2304253 . + . ID=gene-AL42_RS16010;Name=AL42_RS16010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16010;old_locus_tag=AL42_02123 NZ_KK316784.1 Protein Homology CDS 2303540 2304253 . + 0 ID=cds-WP_003410610.1;Parent=gene-AL42_RS16010;Dbxref=GenBank:WP_003410610.1;Name=WP_003410610.1;Ontology_term=GO:0016787,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216570.1;locus_tag=AL42_RS16010;product=dienelactone hydrolase family protein;protein_id=WP_003410610.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2304502 2304768 . - . ID=gene-AL42_RS16015;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=AL42_RS16015;old_locus_tag=AL42_02124 NZ_KK316784.1 Protein Homology CDS 2304502 2304768 . - 0 ID=cds-WP_003410619.1;Parent=gene-AL42_RS16015;Dbxref=GenBank:WP_003410619.1;Name=WP_003410619.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216571.1;locus_tag=AL42_RS16015;product=30S ribosomal protein S18;protein_id=WP_003410619.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2304769 2305074 . - . ID=gene-AL42_RS16020;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=AL42_RS16020;old_locus_tag=AL42_02125 NZ_KK316784.1 Protein Homology CDS 2304769 2305074 . - 0 ID=cds-WP_003410624.1;Parent=gene-AL42_RS16020;Dbxref=GenBank:WP_003410624.1;Name=WP_003410624.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216572.1;locus_tag=AL42_RS16020;product=30S ribosomal protein S14;protein_id=WP_003410624.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2305076 2305240 . - . ID=gene-AL42_RS16025;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=AL42_RS16025;old_locus_tag=AL42_02126 NZ_KK316784.1 Protein Homology CDS 2305076 2305240 . - 0 ID=cds-WP_003905737.1;Parent=gene-AL42_RS16025;Dbxref=GenBank:WP_003905737.1;Name=WP_003905737.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005063154.1;locus_tag=AL42_RS16025;product=50S ribosomal protein L33;protein_id=WP_003905737.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2305240 2305476 . - . ID=gene-AL42_RS16030;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=AL42_RS16030;old_locus_tag=AL42_02127 NZ_KK316784.1 Protein Homology CDS 2305240 2305476 . - 0 ID=cds-WP_003410631.1;Parent=gene-AL42_RS16030;Dbxref=GenBank:WP_003410631.1;Name=WP_003410631.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216574.1;locus_tag=AL42_RS16030;product=50S ribosomal protein L28;protein_id=WP_003410631.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2305874 2306563 . + . ID=gene-AL42_RS27640;Name=AL42_RS27640;end_range=2306563,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS27640;partial=true;pseudo=true NZ_KK316784.1 Protein Homology CDS 2305874 2306563 . + 0 ID=cds-AL42_RS27640;Parent=gene-AL42_RS27640;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0046872;end_range=2306563,.;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF013465.6;locus_tag=AL42_RS27640;partial=true;product=metal ABC transporter solute-binding protein%2C Zn/Mn family;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 2306694 2307095 . + . ID=gene-AL42_RS27645;Name=AL42_RS27645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27645;old_locus_tag=AL42_02129 NZ_KK316784.1 Protein Homology CDS 2306694 2307095 . + 0 ID=cds-WP_009937711.1;Parent=gene-AL42_RS27645;Dbxref=GenBank:WP_009937711.1;Name=WP_009937711.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013143.6;locus_tag=AL42_RS27645;product=metal ABC transporter permease;protein_id=WP_009937711.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2307096 2307500 . - . ID=gene-AL42_RS16040;Name=AL42_RS16040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16040;old_locus_tag=AL42_02130 NZ_KK316784.1 Protein Homology CDS 2307096 2307500 . - 0 ID=cds-WP_003410645.1;Parent=gene-AL42_RS16040;Dbxref=GenBank:WP_003410645.1;Name=WP_003410645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216577.1;locus_tag=AL42_RS16040;product=PPOX class F420-dependent oxidoreductase;protein_id=WP_003410645.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2307584 2311168 . - . ID=gene-AL42_RS16045;Name=cobN;gbkey=Gene;gene=cobN;gene_biotype=protein_coding;locus_tag=AL42_RS16045;old_locus_tag=AL42_02131 NZ_KK316784.1 Protein Homology CDS 2307584 2311168 . - 0 ID=cds-WP_003910889.1;Parent=gene-AL42_RS16045;Dbxref=GenBank:WP_003910889.1;Name=WP_003910889.1;Ontology_term=GO:0009236,GO:0051116;gbkey=CDS;gene=cobN;go_function=cobaltochelatase activity|0051116||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216578.1;locus_tag=AL42_RS16045;product=cobaltochelatase subunit CobN;protein_id=WP_003910889.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2311246 2311479 . + . ID=gene-AL42_RS16050;Name=mazE7;gbkey=Gene;gene=mazE7;gene_biotype=protein_coding;locus_tag=AL42_RS16050;old_locus_tag=AL42_02132 NZ_KK316784.1 Protein Homology CDS 2311246 2311479 . + 0 ID=cds-WP_003410651.1;Parent=gene-AL42_RS16050;Dbxref=GenBank:WP_003410651.1;Name=WP_003410651.1;gbkey=CDS;gene=mazE7;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177657.1;locus_tag=AL42_RS16050;product=type II toxin-antitoxin system antitoxin MazE7;protein_id=WP_003410651.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2311472 2311882 . + . ID=gene-AL42_RS16055;Name=mazF7;gbkey=Gene;gene=mazF7;gene_biotype=protein_coding;gene_synonym=mazF-mt9;locus_tag=AL42_RS16055;old_locus_tag=AL42_02133 NZ_KK316784.1 Protein Homology CDS 2311472 2311882 . + 0 ID=cds-WP_003410654.1;Parent=gene-AL42_RS16055;Dbxref=GenBank:WP_003410654.1;Name=WP_003410654.1;gbkey=CDS;gene=mazF7;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004837055.2;locus_tag=AL42_RS16055;product=type II toxin-antitoxin system toxin endoribonuclease MazF7;protein_id=WP_003410654.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2311866 2312957 . + . ID=gene-AL42_RS16060;Name=cobG;gbkey=Gene;gene=cobG;gene_biotype=protein_coding;locus_tag=AL42_RS16060;old_locus_tag=AL42_02134 NZ_KK316784.1 Protein Homology CDS 2311866 2312957 . + 0 ID=cds-WP_003900454.1;Parent=gene-AL42_RS16060;Dbxref=GenBank:WP_003900454.1;Name=WP_003900454.1;Ontology_term=GO:0019250,GO:0016709;gbkey=CDS;gene=cobG;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=aerobic cobalamin biosynthetic process|0019250||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216580.1;locus_tag=AL42_RS16060;product=precorrin-3B synthase;protein_id=WP_003900454.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2312967 2313593 . + . ID=gene-AL42_RS16065;Name=cobH;gbkey=Gene;gene=cobH;gene_biotype=protein_coding;locus_tag=AL42_RS16065;old_locus_tag=AL42_02135 NZ_KK316784.1 Protein Homology CDS 2312967 2313593 . + 0 ID=cds-WP_003410658.1;Parent=gene-AL42_RS16065;Dbxref=GenBank:WP_003410658.1;Name=WP_003410658.1;Ontology_term=GO:0009236,GO:0016993;gbkey=CDS;gene=cobH;go_function=precorrin-8X methylmutase activity|0016993||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216581.1;locus_tag=AL42_RS16065;product=precorrin-8X methylmutase;protein_id=WP_003410658.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2313590 2315116 . + . ID=gene-AL42_RS16070;Name=cobI;gbkey=Gene;gene=cobI;gene_biotype=protein_coding;locus_tag=AL42_RS16070;old_locus_tag=AL42_02136 NZ_KK316784.1 Protein Homology CDS 2313590 2315116 . + 0 ID=cds-WP_003410659.1;Parent=gene-AL42_RS16070;Dbxref=GenBank:WP_003410659.1;Name=WP_003410659.1;Ontology_term=GO:0009236,GO:0030788;gbkey=CDS;gene=cobI;go_function=precorrin-2 C20-methyltransferase activity|0030788||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216582.1;locus_tag=AL42_RS16070;product=precorrin-2 C(20)-methyltransferase;protein_id=WP_003410659.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2315062 2316285 . - . ID=gene-AL42_RS16075;Name=AL42_RS16075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16075;old_locus_tag=AL42_02137 NZ_KK316784.1 Protein Homology CDS 2315062 2316285 . - 0 ID=cds-WP_003901321.1;Parent=gene-AL42_RS16075;Dbxref=GenBank:WP_003901321.1;Name=WP_003901321.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216583.1;locus_tag=AL42_RS16075;product=class I SAM-dependent methyltransferase;protein_id=WP_003901321.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2316301 2317224 . - . ID=gene-AL42_RS16080;Name=blaC;gbkey=Gene;gene=blaC;gene_biotype=protein_coding;locus_tag=AL42_RS16080;old_locus_tag=AL42_02138 NZ_KK316784.1 Protein Homology CDS 2316301 2317224 . - 0 ID=cds-WP_003410677.1;Parent=gene-AL42_RS16080;Dbxref=GenBank:WP_003410677.1;Name=WP_003410677.1;Ontology_term=GO:0008800;gbkey=CDS;gene=blaC;go_function=beta-lactamase activity|0008800||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003410677.1;locus_tag=AL42_RS16080;product=class A beta-lactamase BlaC;protein_id=WP_003410677.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2317359 2317916 . + . ID=gene-AL42_RS16085;Name=sigC;gbkey=Gene;gene=sigC;gene_biotype=protein_coding;locus_tag=AL42_RS16085;old_locus_tag=AL42_02139 NZ_KK316784.1 Protein Homology CDS 2317359 2317916 . + 0 ID=cds-WP_003410678.1;Parent=gene-AL42_RS16085;Dbxref=GenBank:WP_003410678.1;Name=WP_003410678.1;gbkey=CDS;gene=sigC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216585.1;locus_tag=AL42_RS16085;product=RNA polymerase sigma factor SigC;protein_id=WP_003410678.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2317906 2318640 . - . ID=gene-AL42_RS16090;Name=cobK;gbkey=Gene;gene=cobK;gene_biotype=protein_coding;locus_tag=AL42_RS16090;old_locus_tag=AL42_02140 NZ_KK316784.1 Protein Homology CDS 2317906 2318640 . - 0 ID=cds-WP_003900455.1;Parent=gene-AL42_RS16090;Dbxref=GenBank:WP_003900455.1;Name=WP_003900455.1;Ontology_term=GO:0009236,GO:0016994;gbkey=CDS;gene=cobK;go_function=precorrin-6A reductase activity|0016994||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216586.1;locus_tag=AL42_RS16090;product=cobalt-precorrin-6A reductase;protein_id=WP_003900455.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2318637 2319392 . - . ID=gene-AL42_RS16095;Name=cobM;gbkey=Gene;gene=cobM;gene_biotype=protein_coding;locus_tag=AL42_RS16095;old_locus_tag=AL42_02141 NZ_KK316784.1 Protein Homology CDS 2318637 2319392 . - 0 ID=cds-WP_003410682.1;Parent=gene-AL42_RS16095;Dbxref=GenBank:WP_003410682.1;Name=WP_003410682.1;Ontology_term=GO:0009236,GO:0046026;gbkey=CDS;gene=cobM;go_function=precorrin-4 C11-methyltransferase activity|0046026||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216587.1;locus_tag=AL42_RS16095;product=precorrin-4 C(11)-methyltransferase;protein_id=WP_003410682.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2319389 2320561 . - . ID=gene-AL42_RS16100;Name=cobL;gbkey=Gene;gene=cobL;gene_biotype=protein_coding;locus_tag=AL42_RS16100;old_locus_tag=AL42_02142 NZ_KK316784.1 Protein Homology CDS 2319389 2320561 . - 0 ID=cds-WP_003899155.1;Parent=gene-AL42_RS16100;Dbxref=GenBank:WP_003899155.1;Name=WP_003899155.1;gbkey=CDS;gene=cobL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216588.1;locus_tag=AL42_RS16100;product=bifunctional cobalt-precorrin-7 (C(5))-methyltransferase/cobalt-precorrin-6B (C(15))-methyltransferase;protein_id=WP_003899155.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2320629 2321378 . - . ID=gene-AL42_RS16105;Name=AL42_RS16105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16105;old_locus_tag=AL42_02143 NZ_KK316784.1 Protein Homology CDS 2320629 2321378 . - 0 ID=cds-WP_003900457.1;Parent=gene-AL42_RS16105;Dbxref=GenBank:WP_003900457.1;Name=WP_003900457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216589.1;locus_tag=AL42_RS16105;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_003900457.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2321408 2321821 . + . ID=gene-AL42_RS16110;Name=AL42_RS16110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16110;old_locus_tag=AL42_02144 NZ_KK316784.1 Protein Homology CDS 2321408 2321821 . + 0 ID=cds-WP_003899157.1;Parent=gene-AL42_RS16110;Dbxref=GenBank:WP_003899157.1;Name=WP_003899157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216590.1;locus_tag=AL42_RS16110;product=F420-dependent biliverdin reductase;protein_id=WP_003899157.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2321831 2323294 . - . ID=gene-AL42_RS16115;Name=AL42_RS16115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16115;old_locus_tag=AL42_02145 NZ_KK316784.1 Protein Homology CDS 2321831 2323294 . - 0 ID=cds-WP_003902116.1;Parent=gene-AL42_RS16115;Dbxref=GenBank:WP_003902116.1;Name=WP_003902116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216591.1;locus_tag=AL42_RS16115;product=phosphoinositide-specific phospholipase C-related protein;protein_id=WP_003902116.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2323738 2324709 . - . ID=gene-AL42_RS16125;Name=AL42_RS16125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16125;old_locus_tag=AL42_02147 NZ_KK316784.1 Protein Homology CDS 2323738 2324709 . - 0 ID=cds-WP_003899159.1;Parent=gene-AL42_RS16125;Dbxref=GenBank:WP_003899159.1;Name=WP_003899159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216593.1;locus_tag=AL42_RS16125;product=hypothetical protein;protein_id=WP_003899159.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2324710 2325009 . - . ID=gene-AL42_RS16130;Name=AL42_RS16130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16130;old_locus_tag=AL42_02148 NZ_KK316784.1 Protein Homology CDS 2324710 2325009 . - 0 ID=cds-WP_003410695.1;Parent=gene-AL42_RS16130;Dbxref=GenBank:WP_003410695.1;Name=WP_003410695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177658.1;locus_tag=AL42_RS16130;product=hypothetical protein;protein_id=WP_003410695.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2325474 2325788 . + . ID=gene-AL42_RS16135;Name=AL42_RS16135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16135;old_locus_tag=AL42_02150 NZ_KK316784.1 Protein Homology CDS 2325474 2325788 . + 0 ID=cds-WP_003410700.1;Parent=gene-AL42_RS16135;Dbxref=GenBank:WP_003410700.1;Name=WP_003410700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216594.1;locus_tag=AL42_RS16135;product=DUF2563 family protein;protein_id=WP_003410700.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2325770 2327740 . + . ID=gene-AL42_RS16140;Name=AL42_RS16140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS16140;old_locus_tag=AL42_02151;pseudo=true NZ_KK316784.1 Protein Homology CDS 2325770 2327740 . + 0 ID=cds-AL42_RS16140;Parent=gene-AL42_RS16140;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216595.1;locus_tag=AL42_RS16140;product=alpha/beta hydrolase;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 2327721 2328284 . + . ID=gene-AL42_RS16145;Name=AL42_RS16145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16145;old_locus_tag=AL42_02152 NZ_KK316784.1 Protein Homology CDS 2327721 2328284 . + 0 ID=cds-WP_003899161.1;Parent=gene-AL42_RS16145;Dbxref=GenBank:WP_003899161.1;Name=WP_003899161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216596.1;locus_tag=AL42_RS16145;product=hypothetical protein;protein_id=WP_003899161.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2328349 2328513 . + . ID=gene-AL42_RS27650;Name=AL42_RS27650;end_range=2328513,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS27650;partial=true;pseudo=true;start_range=.,2328349 NZ_KK316784.1 Protein Homology CDS 2328349 2328513 . + 0 ID=cds-AL42_RS27650;Parent=gene-AL42_RS27650;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2328513,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216598.1;locus_tag=AL42_RS27650;partial=true;product=DUF5631 domain-containing protein;pseudo=true;start_range=.,2328349;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2328480 2328861 . - . ID=gene-AL42_RS27655;Name=AL42_RS27655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS27655;old_locus_tag=AL42_02153;pseudo=true NZ_KK316784.1 Protein Homology CDS 2328480 2328861 . - 0 ID=cds-AL42_RS27655;Parent=gene-AL42_RS27655;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216597.1;locus_tag=AL42_RS27655;product=hypothetical protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 2328743 2329135 . + . ID=gene-AL42_RS27230;Name=AL42_RS27230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27230 NZ_KK316784.1 Protein Homology CDS 2328743 2329135 . + 0 ID=cds-WP_223695514.1;Parent=gene-AL42_RS27230;Dbxref=GenBank:WP_223695514.1;Name=WP_223695514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003909575.1;locus_tag=AL42_RS27230;product=hypothetical protein;protein_id=WP_223695514.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2329125 2331290 . + . ID=gene-AL42_RS16150;Name=AL42_RS16150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16150;old_locus_tag=AL42_02154 NZ_KK316784.1 Protein Homology CDS 2329125 2331290 . + 0 ID=cds-WP_003910892.1;Parent=gene-AL42_RS16150;Dbxref=GenBank:WP_003910892.1;Name=WP_003910892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216598.1;locus_tag=AL42_RS16150;product=DUF5631 domain-containing protein;protein_id=WP_003910892.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2331287 2332231 . + . ID=gene-AL42_RS16155;Name=AL42_RS16155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16155;old_locus_tag=AL42_02155 NZ_KK316784.1 Protein Homology CDS 2331287 2332231 . + 0 ID=cds-WP_003900461.1;Parent=gene-AL42_RS16155;Dbxref=GenBank:WP_003900461.1;Name=WP_003900461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216599.1;locus_tag=AL42_RS16155;product=hypothetical protein;protein_id=WP_003900461.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2332224 2333371 . + . ID=gene-AL42_RS16160;Name=AL42_RS16160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS16160;old_locus_tag=AL42_02156;pseudo=true NZ_KK316784.1 Protein Homology CDS 2332224 2333371 . + 0 ID=cds-AL42_RS16160;Parent=gene-AL42_RS16160;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216600.1;locus_tag=AL42_RS16160;product=hypothetical protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2333574 2334651 . + . ID=gene-AL42_RS27660;Name=AL42_RS27660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS27660;partial=true;pseudo=true;start_range=.,2333574 NZ_KK316784.1 Protein Homology CDS 2333574 2334651 . + 0 ID=cds-AL42_RS27660;Parent=gene-AL42_RS27660;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611776.1;locus_tag=AL42_RS27660;partial=true;product=IS3-like element ISMyma10 family transposase;pseudo=true;start_range=.,2333574;transl_table=11 NZ_KK316784.1 RefSeq gene 2334838 2336607 . + . ID=gene-AL42_RS16180;Name=pknJ;gbkey=Gene;gene=pknJ;gene_biotype=protein_coding;locus_tag=AL42_RS16180;old_locus_tag=AL42_02160 NZ_KK316784.1 Protein Homology CDS 2334838 2336607 . + 0 ID=cds-WP_003905749.1;Parent=gene-AL42_RS16180;Dbxref=GenBank:WP_003905749.1;Name=WP_003905749.1;gbkey=CDS;gene=pknJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216604.1;locus_tag=AL42_RS16180;product=serine/threonine protein kinase PknJ;protein_id=WP_003905749.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2336624 2337751 . - . ID=gene-AL42_RS16185;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=AL42_RS16185;old_locus_tag=AL42_02161 NZ_KK316784.1 Protein Homology CDS 2336624 2337751 . - 0 ID=cds-WP_003905750.1;Parent=gene-AL42_RS16185;Dbxref=GenBank:WP_003905750.1;Name=WP_003905750.1;Ontology_term=GO:0006508,GO:0004177,GO:0008233,GO:0016787,GO:0046872,GO:0070006;gbkey=CDS;gene=pepE;go_function=aminopeptidase activity|0004177||IEA,peptidase activity|0008233||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216605.1;locus_tag=AL42_RS16185;product=M24 family metallopeptidase;protein_id=WP_003905750.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2338025 2338981 . + . ID=gene-AL42_RS16190;Name=AL42_RS16190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16190;old_locus_tag=AL42_02162 NZ_KK316784.1 Protein Homology CDS 2338025 2338981 . + 0 ID=cds-WP_003410750.1;Parent=gene-AL42_RS16190;Dbxref=GenBank:WP_003410750.1;Name=WP_003410750.1;Ontology_term=GO:0003677,GO:0008409;gbkey=CDS;go_function=DNA binding|0003677||IEA,5'-3' exonuclease activity|0008409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016705407.1;locus_tag=AL42_RS16190;product=5'-3' exonuclease;protein_id=WP_003410750.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2338985 2339719 . - . ID=gene-AL42_RS16195;Name=AL42_RS16195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16195;old_locus_tag=AL42_02163 NZ_KK316784.1 Protein Homology CDS 2338985 2339719 . - 0 ID=cds-WP_003410762.1;Parent=gene-AL42_RS16195;Dbxref=GenBank:WP_003410762.1;Name=WP_003410762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216607.1;locus_tag=AL42_RS16195;product=DUF4333 domain-containing protein;protein_id=WP_003410762.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2339761 2342481 . - . ID=gene-AL42_RS16200;Name=helY;gbkey=Gene;gene=helY;gene_biotype=protein_coding;locus_tag=AL42_RS16200;old_locus_tag=AL42_02164 NZ_KK316784.1 Protein Homology CDS 2339761 2342481 . - 0 ID=cds-WP_003899167.1;Parent=gene-AL42_RS16200;Dbxref=GenBank:WP_003899167.1;Name=WP_003899167.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;gene=helY;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216608.1;locus_tag=AL42_RS16200;product=DEAD/DEAH box helicase;protein_id=WP_003899167.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2342598 2343524 . - . ID=gene-AL42_RS16205;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=AL42_RS16205;old_locus_tag=AL42_02165 NZ_KK316784.1 Protein Homology CDS 2342598 2343524 . - 0 ID=cds-WP_003410764.1;Parent=gene-AL42_RS16205;Dbxref=GenBank:WP_003410764.1;Name=WP_003410764.1;Ontology_term=GO:0015628,GO:0005886;gbkey=CDS;gene=tatC;go_component=plasma membrane|0005886||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216609.1;locus_tag=AL42_RS16205;product=twin-arginine translocase subunit TatC;protein_id=WP_003410764.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2343541 2343792 . - . ID=gene-AL42_RS16210;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=AL42_RS16210;old_locus_tag=AL42_02166 NZ_KK316784.1 Protein Homology CDS 2343541 2343792 . - 0 ID=cds-WP_003410768.1;Parent=gene-AL42_RS16210;Dbxref=GenBank:WP_003410768.1;Name=WP_003410768.1;Ontology_term=GO:0043953,GO:0016020;gbkey=CDS;gene=tatA;go_component=membrane|0016020||IEA;go_process=protein transport by the Tat complex|0043953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216610.1;locus_tag=AL42_RS16210;product=Sec-independent protein translocase subunit TatA;protein_id=WP_003410768.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2343860 2344810 . - . ID=gene-AL42_RS16215;Name=pafC;gbkey=Gene;gene=pafC;gene_biotype=protein_coding;locus_tag=AL42_RS16215;old_locus_tag=AL42_02167 NZ_KK316784.1 Protein Homology CDS 2343860 2344810 . - 0 ID=cds-WP_003410772.1;Parent=gene-AL42_RS16215;Dbxref=GenBank:WP_003410772.1;Name=WP_003410772.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=pafC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216611.1;locus_tag=AL42_RS16215;product=helix-turn-helix transcriptional regulator;protein_id=WP_003410772.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2344807 2345805 . - . ID=gene-AL42_RS16220;Name=pafB;gbkey=Gene;gene=pafB;gene_biotype=protein_coding;locus_tag=AL42_RS16220;old_locus_tag=AL42_02168 NZ_KK316784.1 Protein Homology CDS 2344807 2345805 . - 0 ID=cds-WP_003902122.1;Parent=gene-AL42_RS16220;Dbxref=GenBank:WP_003902122.1;Name=WP_003902122.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=pafB;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216612.1;locus_tag=AL42_RS16220;product=helix-turn-helix transcriptional regulator;protein_id=WP_003902122.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2345814 2347172 . - . ID=gene-AL42_RS16225;Name=pafA;gbkey=Gene;gene=pafA;gene_biotype=protein_coding;locus_tag=AL42_RS16225;old_locus_tag=AL42_02169 NZ_KK316784.1 Protein Homology CDS 2345814 2347172 . - 0 ID=cds-WP_003410781.1;Parent=gene-AL42_RS16225;Dbxref=GenBank:WP_003410781.1;Name=WP_003410781.1;Ontology_term=GO:0010498,GO:0019941,GO:0070490,GO:0016879;gbkey=CDS;gene=pafA;go_function=ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=proteasomal protein catabolic process|0010498||IEA,modification-dependent protein catabolic process|0019941||IEA,protein pupylation|0070490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216613.1;locus_tag=AL42_RS16225;product=Pup--protein ligase;protein_id=WP_003410781.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2347224 2348699 . - . ID=gene-AL42_RS0105005;Name=AL42_RS0105005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0105005;old_locus_tag=AL42_02170 NZ_KK316784.1 Protein Homology CDS 2347224 2348699 . - 0 ID=cds-WP_003410786.1;Parent=gene-AL42_RS0105005;Dbxref=GenBank:WP_003410786.1;Name=WP_003410786.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003410786.1;locus_tag=AL42_RS0105005;product=PE family protein;protein_id=WP_003410786.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2348996 2350534 . + . ID=gene-AL42_RS16230;Name=AL42_RS16230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16230;old_locus_tag=AL42_02172 NZ_KK316784.1 Protein Homology CDS 2348996 2350534 . + 0 ID=cds-WP_023637436.1;Parent=gene-AL42_RS16230;Dbxref=GenBank:WP_023637436.1;Name=WP_023637436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003926636.1;locus_tag=AL42_RS16230;product=HNH endonuclease signature motif containing protein;protein_id=WP_023637436.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2350733 2353774 . + . ID=gene-AL42_RS16235;Name=helZ;gbkey=Gene;gene=helZ;gene_biotype=protein_coding;locus_tag=AL42_RS16235;old_locus_tag=AL42_02173 NZ_KK316784.1 Protein Homology CDS 2350733 2353774 . + 0 ID=cds-WP_031721821.1;Parent=gene-AL42_RS16235;Dbxref=GenBank:WP_031721821.1;Name=WP_031721821.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;gene=helZ;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216617.2;locus_tag=AL42_RS16235;product=DEAD/DEAH box helicase;protein_id=WP_031721821.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2353767 2354600 . + . ID=gene-AL42_RS16240;Name=AL42_RS16240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16240;old_locus_tag=AL42_02174 NZ_KK316784.1 Protein Homology CDS 2353767 2354600 . + 0 ID=cds-WP_003899172.1;Parent=gene-AL42_RS16240;Dbxref=GenBank:WP_003899172.1;Name=WP_003899172.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017351184.1;locus_tag=AL42_RS16240;product=SWIM zinc finger family protein;protein_id=WP_003899172.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2354579 2355013 . - . ID=gene-AL42_RS16245;Name=AL42_RS16245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16245;old_locus_tag=AL42_02175 NZ_KK316784.1 Protein Homology CDS 2354579 2355013 . - 0 ID=cds-WP_003905754.1;Parent=gene-AL42_RS16245;Dbxref=GenBank:WP_003905754.1;Name=WP_003905754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216619.1;locus_tag=AL42_RS16245;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003905754.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2355020 2355274 . - . ID=gene-AL42_RS16250;Name=AL42_RS16250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16250;old_locus_tag=AL42_02176 NZ_KK316784.1 Protein Homology CDS 2355020 2355274 . - 0 ID=cds-WP_003410814.1;Parent=gene-AL42_RS16250;Dbxref=GenBank:WP_003410814.1;Name=WP_003410814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216620.1;locus_tag=AL42_RS16250;product=antitoxin;protein_id=WP_003410814.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2355290 2355547 . - . ID=gene-AL42_RS0105010;Name=AL42_RS0105010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0105010 NZ_KK316784.1 Protein Homology CDS 2355290 2355547 . - 0 ID=cds-WP_003410816.1;Parent=gene-AL42_RS0105010;Dbxref=GenBank:WP_003410816.1;Name=WP_003410816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030035.1;locus_tag=AL42_RS0105010;product=hypothetical protein;protein_id=WP_003410816.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2356081 2357342 . + . ID=gene-AL42_RS16260;Name=AL42_RS16260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16260;old_locus_tag=AL42_02178 NZ_KK316784.1 Protein Homology CDS 2356081 2356369 . + 0 ID=cds-WP_087902221.1-7;Parent=gene-AL42_RS16260;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL42_RS16260;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316784.1 Protein Homology CDS 2356369 2357342 . + 2 ID=cds-WP_087902221.1-7;Parent=gene-AL42_RS16260;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL42_RS16260;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2357852 2358148 . + . ID=gene-AL42_RS16265;Name=AL42_RS16265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16265;old_locus_tag=AL42_02179 NZ_KK316784.1 Protein Homology CDS 2357852 2358148 . + 0 ID=cds-WP_003410820.1;Parent=gene-AL42_RS16265;Dbxref=GenBank:WP_003410820.1;Name=WP_003410820.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177858.1;locus_tag=AL42_RS16265;product=PE family protein;protein_id=WP_003410820.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2358204 2358935 . + . ID=gene-AL42_RS16270;Name=AL42_RS16270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16270;old_locus_tag=AL42_02180 NZ_KK316784.1 Protein Homology CDS 2358204 2358935 . + 0 ID=cds-WP_003900467.1;Parent=gene-AL42_RS16270;Dbxref=GenBank:WP_003900467.1;Name=WP_003900467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177859.1;locus_tag=AL42_RS16270;product=PPE family protein;protein_id=WP_003900467.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2359475 2360221 . - . ID=gene-AL42_RS16275;Name=prcA;gbkey=Gene;gene=prcA;gene_biotype=protein_coding;locus_tag=AL42_RS16275;old_locus_tag=AL42_02181 NZ_KK316784.1 Protein Homology CDS 2359475 2360221 . - 0 ID=cds-WP_003901330.1;Parent=gene-AL42_RS16275;Dbxref=GenBank:WP_003901330.1;Name=WP_003901330.1;Ontology_term=GO:0051603,GO:0004298,GO:0019773;gbkey=CDS;gene=prcA;go_component=proteasome core complex%2C alpha-subunit complex|0019773||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216625.1;locus_tag=AL42_RS16275;product=proteasome subunit alpha;protein_id=WP_003901330.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2360218 2361093 . - . ID=gene-AL42_RS16280;Name=prcB;gbkey=Gene;gene=prcB;gene_biotype=protein_coding;locus_tag=AL42_RS16280;old_locus_tag=AL42_02182 NZ_KK316784.1 Protein Homology CDS 2360218 2361093 . - 0 ID=cds-WP_003411023.1;Parent=gene-AL42_RS16280;Dbxref=GenBank:WP_003411023.1;Name=WP_003411023.1;Ontology_term=GO:0010498,GO:0004298,GO:0005839;gbkey=CDS;gene=prcB;go_component=proteasome core complex|0005839||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteasomal protein catabolic process|0010498||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216626.1;locus_tag=AL42_RS16280;product=proteasome subunit beta;protein_id=WP_003411023.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2361090 2361284 . - . ID=gene-AL42_RS16285;Name=pup;gbkey=Gene;gene=pup;gene_biotype=protein_coding;locus_tag=AL42_RS16285;old_locus_tag=AL42_02183 NZ_KK316784.1 Protein Homology CDS 2361090 2361284 . - 0 ID=cds-WP_003411026.1;Parent=gene-AL42_RS16285;Dbxref=GenBank:WP_003411026.1;Name=WP_003411026.1;Ontology_term=GO:0010498,GO:0019941,GO:0070490,GO:0031386,GO:0070628;gbkey=CDS;gene=pup;go_function=protein tag activity|0031386||IEA,proteasome binding|0070628||IEA;go_process=proteasomal protein catabolic process|0010498||IEA,modification-dependent protein catabolic process|0019941||IEA,protein pupylation|0070490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003887572.1;locus_tag=AL42_RS16285;product=ubiquitin-like protein Pup;protein_id=WP_003411026.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2361397 2362914 . - . ID=gene-AL42_RS16290;Name=dop;gbkey=Gene;gene=dop;gene_biotype=protein_coding;locus_tag=AL42_RS16290;old_locus_tag=AL42_02184 NZ_KK316784.1 Protein Homology CDS 2361397 2362914 . - 0 ID=cds-WP_003411029.1;Parent=gene-AL42_RS16290;Dbxref=GenBank:WP_003411029.1;Name=WP_003411029.1;gbkey=CDS;gene=dop;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003411029.1;locus_tag=AL42_RS16290;product=pup deamidase/depupylase;protein_id=WP_003411029.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2363122 2364315 . + . ID=gene-AL42_RS16295;Name=AL42_RS16295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16295;old_locus_tag=AL42_02185 NZ_KK316784.1 Protein Homology CDS 2363122 2364315 . + 0 ID=cds-WP_003411031.1;Parent=gene-AL42_RS16295;Dbxref=GenBank:WP_003411031.1;Name=WP_003411031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216629.1;locus_tag=AL42_RS16295;product=integral membrane protein;protein_id=WP_003411031.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2364326 2364949 . + . ID=gene-AL42_RS16300;Name=AL42_RS16300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16300;old_locus_tag=AL42_02186 NZ_KK316784.1 Protein Homology CDS 2364326 2364949 . + 0 ID=cds-WP_003411033.1;Parent=gene-AL42_RS16300;Dbxref=GenBank:WP_003411033.1;Name=WP_003411033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216630.1;locus_tag=AL42_RS16300;product=hypothetical protein;protein_id=WP_003411033.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2364953 2366782 . - . ID=gene-AL42_RS16305;Name=arc;gbkey=Gene;gene=arc;gene_biotype=protein_coding;locus_tag=AL42_RS16305;old_locus_tag=AL42_02187 NZ_KK316784.1 Protein Homology CDS 2364953 2366782 . - 0 ID=cds-WP_003411035.1;Parent=gene-AL42_RS16305;Dbxref=GenBank:WP_003411035.1;Name=WP_003411035.1;Ontology_term=GO:0010498,GO:0019941,GO:0016887,GO:0000502;gbkey=CDS;gene=arc;go_component=proteasome complex|0000502||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=proteasomal protein catabolic process|0010498||IEA,modification-dependent protein catabolic process|0019941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216631.1;locus_tag=AL42_RS16305;product=proteasome ATPase;protein_id=WP_003411035.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2367063 2367632 . + . ID=gene-AL42_RS16310;Name=AL42_RS16310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16310;old_locus_tag=AL42_02188 NZ_KK316784.1 Protein Homology CDS 2367063 2367632 . + 0 ID=cds-WP_003900470.1;Parent=gene-AL42_RS16310;Dbxref=GenBank:WP_003900470.1;Name=WP_003900470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216632.1;locus_tag=AL42_RS16310;product=lipoprotein LppK;protein_id=WP_003900470.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2367640 2367933 . + . ID=gene-AL42_RS16315;Name=AL42_RS16315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16315;old_locus_tag=AL42_02189 NZ_KK316784.1 Protein Homology CDS 2367640 2367933 . + 0 ID=cds-WP_003411038.1;Parent=gene-AL42_RS16315;Dbxref=GenBank:WP_003411038.1;Name=WP_003411038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216633.1;locus_tag=AL42_RS16315;product=DUF503 domain-containing protein;protein_id=WP_003411038.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2367962 2368804 . - . ID=gene-AL42_RS16320;Name=trmI;gbkey=Gene;gene=trmI;gene_biotype=protein_coding;locus_tag=AL42_RS16320;old_locus_tag=AL42_02190 NZ_KK316784.1 Protein Homology CDS 2367962 2368804 . - 0 ID=cds-WP_003411041.1;Parent=gene-AL42_RS16320;Dbxref=GenBank:WP_003411041.1;Name=WP_003411041.1;gbkey=CDS;gene=trmI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216634.1;locus_tag=AL42_RS16320;product=tRNA (adenine(58)-N(1))-methyltransferase TrmI;protein_id=WP_003411041.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2368878 2369714 . + . ID=gene-AL42_RS16325;Name=AL42_RS16325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16325;old_locus_tag=AL42_02191 NZ_KK316784.1 Protein Homology CDS 2368878 2369714 . + 0 ID=cds-WP_003899178.1;Parent=gene-AL42_RS16325;Dbxref=GenBank:WP_003899178.1;Name=WP_003899178.1;Ontology_term=GO:0003677,GO:0003678,GO:0004518,GO:0005524,GO:0008854,GO:0009338;gbkey=CDS;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,nuclease activity|0004518||IEA,ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216635.1;locus_tag=AL42_RS16325;product=RecB family exonuclease;protein_id=WP_003899178.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2369737 2370219 . - . ID=gene-AL42_RS16330;Name=AL42_RS16330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16330;old_locus_tag=AL42_02192 NZ_KK316784.1 Protein Homology CDS 2369737 2370219 . - 0 ID=cds-WP_003900471.1;Parent=gene-AL42_RS16330;Dbxref=GenBank:WP_003900471.1;Name=WP_003900471.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216636.1;locus_tag=AL42_RS16330;product=glycine zipper 2TM domain-containing protein;protein_id=WP_003900471.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2370298 2371152 . - . ID=gene-AL42_RS16335;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=AL42_RS16335;old_locus_tag=AL42_02193 NZ_KK316784.1 Protein Homology CDS 2370298 2371152 . - 0 ID=cds-WP_003411047.1;Parent=gene-AL42_RS16335;Dbxref=GenBank:WP_003411047.1;Name=WP_003411047.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216637.1;locus_tag=AL42_RS16335;product=ATP phosphoribosyltransferase;protein_id=WP_003411047.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2371155 2371436 . - . ID=gene-AL42_RS16340;Name=hisE;gbkey=Gene;gene=hisE;gene_biotype=protein_coding;locus_tag=AL42_RS16340;old_locus_tag=AL42_02194 NZ_KK316784.1 Protein Homology CDS 2371155 2371436 . - 0 ID=cds-WP_003899180.1;Parent=gene-AL42_RS16340;Dbxref=GenBank:WP_003899180.1;Name=WP_003899180.1;Ontology_term=GO:0004636;gbkey=CDS;gene=hisE;go_function=phosphoribosyl-ATP diphosphatase activity|0004636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177860.1;locus_tag=AL42_RS16340;product=phosphoribosyl-ATP diphosphatase;protein_id=WP_003899180.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2371563 2372983 . + . ID=gene-AL42_RS26045;Name=AL42_RS26045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS26045;pseudo=true NZ_KK316784.1 Protein Homology CDS 2371563 2372983 . + 0 ID=cds-AL42_RS26045;Parent=gene-AL42_RS26045;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177861.1;locus_tag=AL42_RS26045;product=PPE domain-containing protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 2372980 2376558 . - . ID=gene-AL42_RS16350;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=AL42_RS16350;old_locus_tag=AL42_02196 NZ_KK316784.1 Protein Homology CDS 2372980 2376558 . - 0 ID=cds-WP_003900472.1;Parent=gene-AL42_RS16350;Dbxref=GenBank:WP_003900472.1;Name=WP_003900472.1;Ontology_term=GO:0009086,GO:0008270,GO:0008705,GO:0031419;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA,cobalamin binding|0031419||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216640.1;locus_tag=AL42_RS16350;product=methionine synthase;protein_id=WP_003900472.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2376784 2377662 . + . ID=gene-AL42_RS16355;Name=AL42_RS16355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16355;old_locus_tag=AL42_02197 NZ_KK316784.1 Protein Homology CDS 2376784 2377662 . + 0 ID=cds-WP_003411060.1;Parent=gene-AL42_RS16355;Dbxref=GenBank:WP_003411060.1;Name=WP_003411060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216641.1;locus_tag=AL42_RS16355;product=PAC2 family protein;protein_id=WP_003411060.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2377693 2378463 . - . ID=gene-AL42_RS0105020;Name=AL42_RS0105020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0105020;old_locus_tag=AL42_02198 NZ_KK316784.1 Protein Homology CDS 2377693 2378463 . - 0 ID=cds-WP_003411064.1;Parent=gene-AL42_RS0105020;Dbxref=GenBank:WP_003411064.1;Name=WP_003411064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177862.1;locus_tag=AL42_RS0105020;product=PGRS repeat-containing protein;protein_id=WP_003411064.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2378460 2378666 . - . ID=gene-AL42_RS27850;Name=AL42_RS27850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27850 NZ_KK316784.1 Protein Homology CDS 2378460 2378666 . - 0 ID=cds-WP_050167243.1;Parent=gene-AL42_RS27850;Dbxref=GenBank:WP_050167243.1;Name=WP_050167243.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: protein motif:HMM:NF013127.6;locus_tag=AL42_RS27850;product=PE family protein;protein_id=WP_050167243.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2379107 2380576 . + . ID=gene-AL42_RS16360;Name=AL42_RS16360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16360;old_locus_tag=AL42_02199 NZ_KK316784.1 Protein Homology CDS 2379107 2380576 . + 0 ID=cds-WP_003411072.1;Parent=gene-AL42_RS16360;Dbxref=GenBank:WP_003411072.1;Name=WP_003411072.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177863.1;locus_tag=AL42_RS16360;product=amino acid permease;protein_id=WP_003411072.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2380576 2380779 . + . ID=gene-AL42_RS16365;Name=AL42_RS16365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16365;old_locus_tag=AL42_02200 NZ_KK316784.1 Protein Homology CDS 2380576 2380779 . + 0 ID=cds-WP_003411082.1;Parent=gene-AL42_RS16365;Dbxref=GenBank:WP_003411082.1;Name=WP_003411082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216644.1;locus_tag=AL42_RS16365;product=hypothetical protein;protein_id=WP_003411082.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2380799 2381680 . - . ID=gene-AL42_RS16370;Name=AL42_RS16370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16370;old_locus_tag=AL42_02201 NZ_KK316784.1 Protein Homology CDS 2380799 2381680 . - 0 ID=cds-WP_003411086.1;Parent=gene-AL42_RS16370;Dbxref=GenBank:WP_003411086.1;Name=WP_003411086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216645.1;locus_tag=AL42_RS16370;product=SDR family oxidoreductase;protein_id=WP_003411086.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2381706 2382950 . - . ID=gene-AL42_RS16375;Name=mshC;gbkey=Gene;gene=mshC;gene_biotype=protein_coding;locus_tag=AL42_RS16375;old_locus_tag=AL42_02202 NZ_KK316784.1 Protein Homology CDS 2381706 2382950 . - 0 ID=cds-WP_003411091.1;Parent=gene-AL42_RS16375;Dbxref=GenBank:WP_003411091.1;Name=WP_003411091.1;Ontology_term=GO:0010125,GO:0035446;gbkey=CDS;gene=mshC;go_function=cysteine-glucosaminylinositol ligase activity|0035446||IEA;go_process=mycothiol biosynthetic process|0010125||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216646.1;locus_tag=AL42_RS16375;product=cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase;protein_id=WP_003411091.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2383008 2383811 . - . ID=gene-AL42_RS16380;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=AL42_RS16380;old_locus_tag=AL42_02203 NZ_KK316784.1 Protein Homology CDS 2383008 2383811 . - 0 ID=cds-WP_003411096.1;Parent=gene-AL42_RS16380;Dbxref=GenBank:WP_003411096.1;Name=WP_003411096.1;gbkey=CDS;gene=cysQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216647.1;locus_tag=AL42_RS16380;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_003411096.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2383902 2384132 . + . ID=gene-AL42_RS16385;Name=AL42_RS16385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16385;old_locus_tag=AL42_02204 NZ_KK316784.1 Protein Homology CDS 2383902 2384132 . + 0 ID=cds-WP_003411099.1;Parent=gene-AL42_RS16385;Dbxref=GenBank:WP_003411099.1;Name=WP_003411099.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216648.1;locus_tag=AL42_RS16385;product=ribbon-helix-helix protein%2C CopG family;protein_id=WP_003411099.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2384342 2385157 . - . ID=gene-AL42_RS16390;Name=AL42_RS16390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16390;old_locus_tag=AL42_02205 NZ_KK316784.1 Protein Homology CDS 2384342 2385157 . - 0 ID=cds-WP_003900473.1;Parent=gene-AL42_RS16390;Dbxref=GenBank:WP_003900473.1;Name=WP_003900473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019306174.1;locus_tag=AL42_RS16390;product=SCO1664 family protein;protein_id=WP_003900473.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2385141 2385728 . - . ID=gene-AL42_RS16395;Name=AL42_RS16395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16395;old_locus_tag=AL42_02206 NZ_KK316784.1 Protein Homology CDS 2385141 2385728 . - 0 ID=cds-WP_003411102.1;Parent=gene-AL42_RS16395;Dbxref=GenBank:WP_003411102.1;Name=WP_003411102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007170405.1;locus_tag=AL42_RS16395;product=DUF3090 domain-containing protein;protein_id=WP_003411102.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2385792 2386502 . - . ID=gene-AL42_RS16400;Name=AL42_RS16400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16400;old_locus_tag=AL42_02207 NZ_KK316784.1 Protein Homology CDS 2385792 2386502 . - 0 ID=cds-WP_003411103.1;Parent=gene-AL42_RS16400;Dbxref=GenBank:WP_003411103.1;Name=WP_003411103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216651.1;locus_tag=AL42_RS16400;product=histidine phosphatase family protein;protein_id=WP_003411103.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2386499 2387329 . - . ID=gene-AL42_RS16405;Name=AL42_RS16405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16405;old_locus_tag=AL42_02208 NZ_KK316784.1 Protein Homology CDS 2386499 2387329 . - 0 ID=cds-WP_003411105.1;Parent=gene-AL42_RS16405;Dbxref=GenBank:WP_003411105.1;Name=WP_003411105.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216652.1;locus_tag=AL42_RS16405;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_003411105.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2387393 2387701 . - . ID=gene-AL42_RS0105035;Name=AL42_RS0105035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0105035;old_locus_tag=AL42_02209 NZ_KK316784.1 Protein Homology CDS 2387393 2387701 . - 0 ID=cds-WP_003899184.1;Parent=gene-AL42_RS0105035;Dbxref=GenBank:WP_003899184.1;Name=WP_003899184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003872207.1;locus_tag=AL42_RS0105035;product=hypothetical protein;protein_id=WP_003899184.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2387821 2388897 . + . ID=gene-AL42_RS16410;Name=lppL;gbkey=Gene;gene=lppL;gene_biotype=protein_coding;locus_tag=AL42_RS16410;old_locus_tag=AL42_02210 NZ_KK316784.1 Protein Homology CDS 2387821 2388897 . + 0 ID=cds-WP_003411110.1;Parent=gene-AL42_RS16410;Dbxref=GenBank:WP_003411110.1;Name=WP_003411110.1;gbkey=CDS;gene=lppL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216654.1;locus_tag=AL42_RS16410;product=YncE family protein;protein_id=WP_003411110.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2388894 2389175 . + . ID=gene-AL42_RS0105040;Name=AL42_RS0105040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0105040 NZ_KK316784.1 Protein Homology CDS 2388894 2389175 . + 0 ID=cds-WP_003411112.1;Parent=gene-AL42_RS0105040;Dbxref=GenBank:WP_003411112.1;Name=WP_003411112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019283661.1;locus_tag=AL42_RS0105040;product=DUF5703 family protein;protein_id=WP_003411112.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2389211 2390284 . + . ID=gene-AL42_RS16415;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=AL42_RS16415;old_locus_tag=AL42_02211 NZ_KK316784.1 Protein Homology CDS 2389211 2390284 . + 0 ID=cds-WP_003901338.1;Parent=gene-AL42_RS16415;Dbxref=GenBank:WP_003901338.1;Name=WP_003901338.1;Ontology_term=GO:0006207,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216655.1;locus_tag=AL42_RS16415;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_003901338.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2390289 2390819 . - . ID=gene-AL42_RS16420;Name=AL42_RS16420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16420;old_locus_tag=AL42_02212 NZ_KK316784.1 Protein Homology CDS 2390289 2390819 . - 0 ID=cds-WP_003411119.1;Parent=gene-AL42_RS16420;Dbxref=GenBank:WP_003411119.1;Name=WP_003411119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216656.1;locus_tag=AL42_RS16420;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WP_003411119.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2390867 2392213 . - . ID=gene-AL42_RS16425;Name=AL42_RS16425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16425;old_locus_tag=AL42_02213 NZ_KK316784.1 Protein Homology CDS 2390867 2392213 . - 0 ID=cds-WP_003411121.1;Parent=gene-AL42_RS16425;Dbxref=GenBank:WP_003411121.1;Name=WP_003411121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177864.1;locus_tag=AL42_RS16425;product=M20/M25/M40 family metallo-hydrolase;protein_id=WP_003411121.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2392478 2392563 . + . ID=gene-AL42_RS16430;Name=AL42_RS16430;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL42_RS16430;old_locus_tag=AL42_02214 NZ_KK316784.1 tRNAscan-SE tRNA 2392478 2392563 . + . ID=rna-AL42_RS16430;Parent=gene-AL42_RS16430;anticodon=(pos:2392511..2392513);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS16430;product=tRNA-Leu NZ_KK316784.1 tRNAscan-SE exon 2392478 2392563 . + . ID=exon-AL42_RS16430-1;Parent=rna-AL42_RS16430;anticodon=(pos:2392511..2392513);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS16430;product=tRNA-Leu NZ_KK316784.1 RefSeq gene 2392684 2393001 . - . ID=gene-AL42_RS16435;Name=AL42_RS16435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16435;old_locus_tag=AL42_02215 NZ_KK316784.1 Protein Homology CDS 2392684 2393001 . - 0 ID=cds-WP_003411124.1;Parent=gene-AL42_RS16435;Dbxref=GenBank:WP_003411124.1;Name=WP_003411124.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216658.1;locus_tag=AL42_RS16435;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_003411124.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2392998 2393213 . - . ID=gene-AL42_RS16440;Name=AL42_RS16440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16440;old_locus_tag=AL42_02216 NZ_KK316784.1 Protein Homology CDS 2392998 2393213 . - 0 ID=cds-WP_003411127.1;Parent=gene-AL42_RS16440;Dbxref=GenBank:WP_003411127.1;Name=WP_003411127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007410825.1;locus_tag=AL42_RS16440;product=antitoxin ParD2;protein_id=WP_003411127.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2393468 2394526 . + . ID=gene-AL42_RS0105045;Name=AL42_RS0105045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0105045;old_locus_tag=AL42_02217 NZ_KK316784.1 Protein Homology CDS 2393468 2394526 . + 0 ID=cds-WP_003411129.1;Parent=gene-AL42_RS0105045;Dbxref=GenBank:WP_003411129.1;Name=WP_003411129.1;Ontology_term=GO:0016772;gbkey=CDS;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216659.1;locus_tag=AL42_RS0105045;product=phosphoribosyltransferase;protein_id=WP_003411129.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2394656 2395012 . - . ID=gene-AL42_RS16445;Name=AL42_RS16445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16445;old_locus_tag=AL42_02218 NZ_KK316784.1 Protein Homology CDS 2394656 2395012 . - 0 ID=cds-WP_003411130.1;Parent=gene-AL42_RS16445;Dbxref=GenBank:WP_003411130.1;Name=WP_003411130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216660.1;locus_tag=AL42_RS16445;product=hypothetical protein;protein_id=WP_003411130.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2395107 2395889 . - . ID=gene-AL42_RS16450;Name=wag31;gbkey=Gene;gene=wag31;gene_biotype=protein_coding;locus_tag=AL42_RS16450;old_locus_tag=AL42_02219 NZ_KK316784.1 Protein Homology CDS 2395107 2395889 . - 0 ID=cds-WP_003411131.1;Parent=gene-AL42_RS16450;Dbxref=GenBank:WP_003411131.1;Name=WP_003411131.1;gbkey=CDS;gene=wag31;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216661.1;locus_tag=AL42_RS16450;product=DivIVA-like cell division protein Wag31;protein_id=WP_003411131.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2396157 2396447 . - . ID=gene-AL42_RS16455;Name=AL42_RS16455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16455;old_locus_tag=AL42_02220 NZ_KK316784.1 Protein Homology CDS 2396157 2396447 . - 0 ID=cds-WP_003900476.1;Parent=gene-AL42_RS16455;Dbxref=GenBank:WP_003900476.1;Name=WP_003900476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216662.1;locus_tag=AL42_RS16455;product=YggT family protein;protein_id=WP_003900476.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2396609 2397265 . - . ID=gene-AL42_RS16460;Name=sepF;gbkey=Gene;gene=sepF;gene_biotype=protein_coding;locus_tag=AL42_RS16460;old_locus_tag=AL42_02221 NZ_KK316784.1 Protein Homology CDS 2396609 2397265 . - 0 ID=cds-WP_003411133.1;Parent=gene-AL42_RS16460;Dbxref=GenBank:WP_003411133.1;Name=WP_003411133.1;gbkey=CDS;gene=sepF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003878111.1;locus_tag=AL42_RS16460;product=cell division protein SepF;protein_id=WP_003411133.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2397327 2398106 . - . ID=gene-AL42_RS0105050;Name=AL42_RS0105050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0105050;old_locus_tag=AL42_02222 NZ_KK316784.1 Protein Homology CDS 2397327 2398106 . - 0 ID=cds-WP_015575160.1;Parent=gene-AL42_RS0105050;Dbxref=GenBank:WP_015575160.1;Name=WP_015575160.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015575160.1;locus_tag=AL42_RS0105050;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_015575160.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2398112 2398819 . - . ID=gene-AL42_RS16465;Name=pgeF;gbkey=Gene;gene=pgeF;gene_biotype=protein_coding;locus_tag=AL42_RS16465;old_locus_tag=AL42_02223 NZ_KK316784.1 Protein Homology CDS 2398112 2398819 . - 0 ID=cds-WP_003911777.1;Parent=gene-AL42_RS16465;Dbxref=GenBank:WP_003911777.1;Name=WP_003911777.1;gbkey=CDS;gene=pgeF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911777.1;locus_tag=AL42_RS16465;product=peptidoglycan editing factor PgeF;protein_id=WP_003911777.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2398875 2400014 . - . ID=gene-AL42_RS16470;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=AL42_RS16470;old_locus_tag=AL42_02224 NZ_KK316784.1 Protein Homology CDS 2398875 2400014 . - 0 ID=cds-WP_003411144.1;Parent=gene-AL42_RS16470;Dbxref=GenBank:WP_003411144.1;Name=WP_003411144.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216666.1;locus_tag=AL42_RS16470;product=cell division protein FtsZ;protein_id=WP_003411144.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2400187 2401131 . - . ID=gene-AL42_RS16475;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=AL42_RS16475;old_locus_tag=AL42_02225 NZ_KK316784.1 Protein Homology CDS 2400187 2401131 . - 0 ID=cds-WP_003411157.1;Parent=gene-AL42_RS16475;Dbxref=GenBank:WP_003411157.1;Name=WP_003411157.1;gbkey=CDS;gene=ftsQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216667.1;locus_tag=AL42_RS16475;product=cell division protein FtsQ;protein_id=WP_003411157.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2401128 2402612 . - . ID=gene-AL42_RS16480;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=AL42_RS16480;old_locus_tag=AL42_02226 NZ_KK316784.1 Protein Homology CDS 2401128 2402612 . - 0 ID=cds-WP_003411159.1;Parent=gene-AL42_RS16480;Dbxref=GenBank:WP_003411159.1;Name=WP_003411159.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216668.1;locus_tag=AL42_RS16480;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_003411159.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2402609 2403841 . - . ID=gene-AL42_RS16485;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=AL42_RS16485;old_locus_tag=AL42_02227 NZ_KK316784.1 Protein Homology CDS 2402609 2403841 . - 0 ID=cds-WP_003411161.1;Parent=gene-AL42_RS16485;Dbxref=GenBank:WP_003411161.1;Name=WP_003411161.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216669.1;locus_tag=AL42_RS16485;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_003411161.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2403838 2405412 . - . ID=gene-AL42_RS16490;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=AL42_RS16490;old_locus_tag=AL42_02228 NZ_KK316784.1 Protein Homology CDS 2403838 2405412 . - 0 ID=cds-WP_003411165.1;Parent=gene-AL42_RS16490;Dbxref=GenBank:WP_003411165.1;Name=WP_003411165.1;Ontology_term=GO:0009252,GO:0051301,GO:0016020;gbkey=CDS;gene=ftsW;go_component=membrane|0016020||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216670.1;locus_tag=AL42_RS16490;product=putative lipid II flippase FtsW;protein_id=WP_003411165.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2405424 2406884 . - . ID=gene-AL42_RS16495;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=AL42_RS16495;old_locus_tag=AL42_02229 NZ_KK316784.1 Protein Homology CDS 2405424 2406884 . - 0 ID=cds-WP_003901342.1;Parent=gene-AL42_RS16495;Dbxref=GenBank:WP_003901342.1;Name=WP_003901342.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216671.3;locus_tag=AL42_RS16495;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_003901342.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2406886 2407965 . - . ID=gene-AL42_RS16500;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=AL42_RS16500;old_locus_tag=AL42_02230 NZ_KK316784.1 Protein Homology CDS 2406886 2407965 . - 0 ID=cds-WP_003411171.1;Parent=gene-AL42_RS16500;Dbxref=GenBank:WP_003411171.1;Name=WP_003411171.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216672.1;locus_tag=AL42_RS16500;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_003411171.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2407962 2409494 . - . ID=gene-AL42_RS16505;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=AL42_RS16505;old_locus_tag=AL42_02231 NZ_KK316784.1 Protein Homology CDS 2407962 2409494 . - 0 ID=cds-WP_003411187.1;Parent=gene-AL42_RS16505;Dbxref=GenBank:WP_003411187.1;Name=WP_003411187.1;Ontology_term=GO:0009252,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216673.1;locus_tag=AL42_RS16505;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_003411187.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2409491 2411098 . - . ID=gene-AL42_RS16510;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=AL42_RS16510;old_locus_tag=AL42_02232 NZ_KK316784.1 Protein Homology CDS 2409491 2411098 . - 0 ID=cds-WP_003411189.1;Parent=gene-AL42_RS16510;Dbxref=GenBank:WP_003411189.1;Name=WP_003411189.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216674.1;locus_tag=AL42_RS16510;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_003411189.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2411121 2412155 . - . ID=gene-AL42_RS16515;Name=AL42_RS16515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16515;old_locus_tag=AL42_02233 NZ_KK316784.1 Protein Homology CDS 2411121 2412155 . - 0 ID=cds-WP_003899194.1;Parent=gene-AL42_RS16515;Dbxref=GenBank:WP_003899194.1;Name=WP_003899194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216675.1;locus_tag=AL42_RS16515;product=alkyl hydroperoxide reductase;protein_id=WP_003899194.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2412152 2412772 . - . ID=gene-AL42_RS0105055;Name=AL42_RS0105055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0105055 NZ_KK316784.1 Protein Homology CDS 2412152 2412772 . - 0 ID=cds-WP_003411199.1;Parent=gene-AL42_RS0105055;Dbxref=GenBank:WP_003411199.1;Name=WP_003411199.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003411199.1;locus_tag=AL42_RS0105055;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003411199.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2412765 2413631 . - . ID=gene-AL42_RS16520;Name=AL42_RS16520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16520;old_locus_tag=AL42_02235 NZ_KK316784.1 Protein Homology CDS 2412765 2413631 . - 0 ID=cds-WP_003411201.1;Parent=gene-AL42_RS16520;Dbxref=GenBank:WP_003411201.1;Name=WP_003411201.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216677.1;locus_tag=AL42_RS16520;product=TIGR03619 family F420-dependent LLM class oxidoreductase;protein_id=WP_003411201.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2413734 2415134 . - . ID=gene-AL42_RS16525;Name=AL42_RS16525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16525;old_locus_tag=AL42_02236 NZ_KK316784.1 Protein Homology CDS 2413734 2415134 . - 0 ID=cds-WP_031648026.1;Parent=gene-AL42_RS16525;Dbxref=GenBank:WP_031648026.1;Name=WP_031648026.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177865.1;locus_tag=AL42_RS16525;product=PE family protein;protein_id=WP_031648026.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2415344 2417383 . - . ID=gene-AL42_RS16530;Name=pbpB;gbkey=Gene;gene=pbpB;gene_biotype=protein_coding;locus_tag=AL42_RS16530;old_locus_tag=AL42_02237 NZ_KK316784.1 Protein Homology CDS 2415344 2417383 . - 0 ID=cds-WP_003411214.1;Parent=gene-AL42_RS16530;Dbxref=GenBank:WP_003411214.1;Name=WP_003411214.1;gbkey=CDS;gene=pbpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216679.1;locus_tag=AL42_RS16530;product=D%2CD-transpeptidase PbpB;protein_id=WP_003411214.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2417380 2418534 . - . ID=gene-AL42_RS16535;Name=AL42_RS16535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16535;old_locus_tag=AL42_02238 NZ_KK316784.1 Protein Homology CDS 2417380 2418534 . - 0 ID=cds-WP_003899197.1;Parent=gene-AL42_RS16535;Dbxref=GenBank:WP_003899197.1;Name=WP_003899197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216680.1;locus_tag=AL42_RS16535;product=cell division protein FtsL;protein_id=WP_003899197.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2418531 2419721 . - . ID=gene-AL42_RS16540;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=AL42_RS16540;old_locus_tag=AL42_02239 NZ_KK316784.1 Protein Homology CDS 2418531 2419721 . - 0 ID=cds-WP_003411221.1;Parent=gene-AL42_RS16540;Dbxref=GenBank:WP_003411221.1;Name=WP_003411221.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216681.4;locus_tag=AL42_RS16540;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_003411221.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2419723 2420154 . - . ID=gene-AL42_RS16545;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=AL42_RS16545;old_locus_tag=AL42_02240 NZ_KK316784.1 Protein Homology CDS 2419723 2420154 . - 0 ID=cds-WP_003411225.1;Parent=gene-AL42_RS16545;Dbxref=GenBank:WP_003411225.1;Name=WP_003411225.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216682.1;locus_tag=AL42_RS16545;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_003411225.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2420503 2420907 . - . ID=gene-AL42_RS16550;Name=AL42_RS16550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16550;old_locus_tag=AL42_02241 NZ_KK316784.1 Protein Homology CDS 2420503 2420907 . - 0 ID=cds-WP_003411231.1;Parent=gene-AL42_RS16550;Dbxref=GenBank:WP_003411231.1;Name=WP_003411231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216685.1;locus_tag=AL42_RS16550;product=DUF3040 domain-containing protein;protein_id=WP_003411231.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2421173 2421793 . + . ID=gene-AL42_RS16555;Name=AL42_RS16555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16555;old_locus_tag=AL42_02242 NZ_KK316784.1 Protein Homology CDS 2421173 2421793 . + 0 ID=cds-WP_003411235.1;Parent=gene-AL42_RS16555;Dbxref=GenBank:WP_003411235.1;Name=WP_003411235.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216686.1;locus_tag=AL42_RS16555;product=GNAT family N-acetyltransferase;protein_id=WP_003411235.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2421889 2422572 . + . ID=gene-AL42_RS16560;Name=lppM;gbkey=Gene;gene=lppM;gene_biotype=protein_coding;locus_tag=AL42_RS16560;old_locus_tag=AL42_02243 NZ_KK316784.1 Protein Homology CDS 2421889 2422572 . + 0 ID=cds-WP_078449387.1;Parent=gene-AL42_RS16560;Dbxref=GenBank:WP_078449387.1;Name=WP_078449387.1;gbkey=CDS;gene=lppM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216687.1;locus_tag=AL42_RS16560;product=lipoprotein LppM;protein_id=WP_078449387.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2422569 2423474 . - . ID=gene-AL42_RS16565;Name=AL42_RS16565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16565;old_locus_tag=AL42_02244 NZ_KK316784.1 Protein Homology CDS 2422569 2423474 . - 0 ID=cds-WP_003411241.1;Parent=gene-AL42_RS16565;Dbxref=GenBank:WP_003411241.1;Name=WP_003411241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216688.1;locus_tag=AL42_RS16565;product=mycobacterial-type methylenetetrahydrofolate reductase;protein_id=WP_003411241.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2423785 2424843 . + . ID=gene-AL42_RS16570;Name=idsA2;gbkey=Gene;gene=idsA2;gene_biotype=protein_coding;locus_tag=AL42_RS16570;old_locus_tag=AL42_02245 NZ_KK316784.1 Protein Homology CDS 2423785 2424843 . + 0 ID=cds-WP_003411245.1;Parent=gene-AL42_RS16570;Dbxref=GenBank:WP_003411245.1;Name=WP_003411245.1;Ontology_term=GO:0008299,GO:0033384,GO:0004161,GO:0004337,GO:0004659;gbkey=CDS;gene=idsA2;go_function=dimethylallyltranstransferase activity|0004161||IEA,(2E%2C6E)-farnesyl diphosphate synthase activity|0004337||IEA,prenyltransferase activity|0004659||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,geranyl diphosphate biosynthetic process|0033384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216689.1;locus_tag=AL42_RS16570;product=bifunctional (2E%2C6E)-farnesyl/geranyl diphosphate synthase;protein_id=WP_003411245.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2424847 2426397 . + . ID=gene-AL42_RS16575;Name=mptA;gbkey=Gene;gene=mptA;gene_biotype=protein_coding;locus_tag=AL42_RS16575;old_locus_tag=AL42_02246 NZ_KK316784.1 Protein Homology CDS 2424847 2426397 . + 0 ID=cds-WP_003899200.1;Parent=gene-AL42_RS16575;Dbxref=GenBank:WP_003899200.1;Name=WP_003899200.1;gbkey=CDS;gene=mptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216690.1;locus_tag=AL42_RS16575;product=alpha-(1->6)-mannopyranosyltransferase A;protein_id=WP_003899200.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2426384 2426788 . - . ID=gene-AL42_RS16580;Name=AL42_RS16580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16580;old_locus_tag=AL42_02247 NZ_KK316784.1 Protein Homology CDS 2426384 2426788 . - 0 ID=cds-WP_003911781.1;Parent=gene-AL42_RS16580;Dbxref=GenBank:WP_003911781.1;Name=WP_003911781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020787128.1;locus_tag=AL42_RS16580;product=Rv2175c family DNA-binding protein;protein_id=WP_003911781.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2426879 2428078 . + . ID=gene-AL42_RS16585;Name=pknL;gbkey=Gene;gene=pknL;gene_biotype=protein_coding;locus_tag=AL42_RS16585;old_locus_tag=AL42_02248 NZ_KK316784.1 Protein Homology CDS 2426879 2428078 . + 0 ID=cds-WP_003899202.1;Parent=gene-AL42_RS16585;Dbxref=GenBank:WP_003899202.1;Name=WP_003899202.1;Ontology_term=GO:0006468,GO:0004672,GO:0005524;gbkey=CDS;gene=pknL;go_function=protein kinase activity|0004672||IEA,ATP binding|0005524||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216692.1;locus_tag=AL42_RS16585;product=protein kinase domain-containing protein;protein_id=WP_003899202.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2428220 2428819 . - . ID=gene-AL42_RS16590;Name=AL42_RS16590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16590;old_locus_tag=AL42_02249 NZ_KK316784.1 Protein Homology CDS 2428220 2428819 . - 0 ID=cds-WP_152313577.1;Parent=gene-AL42_RS16590;Dbxref=GenBank:WP_152313577.1;Name=WP_152313577.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF014430.6;locus_tag=AL42_RS16590;product=transposase;protein_id=WP_152313577.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2428819 2429001 . - . ID=gene-AL42_RS26050;Name=AL42_RS26050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS26050 NZ_KK316784.1 Protein Homology CDS 2428819 2429001 . - 0 ID=cds-WP_003905774.1;Parent=gene-AL42_RS26050;Dbxref=GenBank:WP_003905774.1;Name=WP_003905774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003905774.1;locus_tag=AL42_RS26050;product=hypothetical protein;protein_id=WP_003905774.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2429270 2430658 . - . ID=gene-AL42_RS16595;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=AL42_RS16595;old_locus_tag=AL42_02250 NZ_KK316784.1 Protein Homology CDS 2429270 2430658 . - 0 ID=cds-WP_003411323.1;Parent=gene-AL42_RS16595;Dbxref=GenBank:WP_003411323.1;Name=WP_003411323.1;Ontology_term=GO:0009073,GO:0009423,GO:0003849;gbkey=CDS;gene=aroG;go_function=3-deoxy-7-phosphoheptulonate synthase activity|0003849||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216694.1;locus_tag=AL42_RS16595;product=class II 3-deoxy-7-phosphoheptulonate synthase;protein_id=WP_003411323.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2430749 2431255 . - . ID=gene-AL42_RS16600;Name=AL42_RS16600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16600;old_locus_tag=AL42_02251 NZ_KK316784.1 Protein Homology CDS 2430749 2431255 . - 0 ID=cds-WP_003411331.1;Parent=gene-AL42_RS16600;Dbxref=GenBank:WP_003411331.1;Name=WP_003411331.1;Ontology_term=GO:0000287,GO:0008408;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216695.1;locus_tag=AL42_RS16600;product=polyadenylate-specific 3'-exoribonuclease AS;protein_id=WP_003411331.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2431265 2432152 . - . ID=gene-AL42_RS16605;Name=AL42_RS16605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS16605;old_locus_tag=AL42_02252;pseudo=true NZ_KK316784.1 Protein Homology CDS 2431265 2432152 . - 0 ID=cds-AL42_RS16605;Parent=gene-AL42_RS16605;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216696.1;locus_tag=AL42_RS16605;product=hypothetical protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 2432240 2433523 . + . ID=gene-AL42_RS16610;Name=AL42_RS16610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16610;old_locus_tag=AL42_02253 NZ_KK316784.1 Protein Homology CDS 2432240 2433523 . + 0 ID=cds-WP_003411339.1;Parent=gene-AL42_RS16610;Dbxref=GenBank:WP_003411339.1;Name=WP_003411339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216697.1;locus_tag=AL42_RS16610;product=alpha-(1-2)-phosphatidylinositol mannoside mannosyltransferase;protein_id=WP_003411339.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2433524 2434267 . - . ID=gene-AL42_RS16615;Name=AL42_RS16615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16615;old_locus_tag=AL42_02254 NZ_KK316784.1 Protein Homology CDS 2433524 2434267 . - 0 ID=cds-WP_003411341.1;Parent=gene-AL42_RS16615;Dbxref=GenBank:WP_003411341.1;Name=WP_003411341.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216698.1;locus_tag=AL42_RS16615;product=lysophospholipid acyltransferase family protein;protein_id=WP_003411341.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2434353 2434748 . - . ID=gene-AL42_RS16620;Name=AL42_RS16620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16620;old_locus_tag=AL42_02255 NZ_KK316784.1 Protein Homology CDS 2434353 2434748 . - 0 ID=cds-WP_003411344.1;Parent=gene-AL42_RS16620;Dbxref=GenBank:WP_003411344.1;Name=WP_003411344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216699.1;locus_tag=AL42_RS16620;product=DEAD/DEAH box helicase family protein;protein_id=WP_003411344.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2434745 2436007 . - . ID=gene-AL42_RS16625;Name=AL42_RS16625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16625;old_locus_tag=AL42_02256 NZ_KK316784.1 Protein Homology CDS 2434745 2436007 . - 0 ID=cds-WP_003914048.1;Parent=gene-AL42_RS16625;Dbxref=GenBank:WP_003914048.1;Name=WP_003914048.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003914048.1;locus_tag=AL42_RS16625;product=ArsA family ATPase;protein_id=WP_003914048.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2436004 2436438 . - . ID=gene-AL42_RS16630;Name=AL42_RS16630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16630;old_locus_tag=AL42_02257 NZ_KK316784.1 Protein Homology CDS 2436004 2436438 . - 0 ID=cds-WP_003411354.1;Parent=gene-AL42_RS16630;Dbxref=GenBank:WP_003411354.1;Name=WP_003411354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216701.1;locus_tag=AL42_RS16630;product=SRPBCC family protein;protein_id=WP_003411354.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2436543 2436932 . - . ID=gene-AL42_RS16635;Name=AL42_RS16635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16635;old_locus_tag=AL42_02258 NZ_KK316784.1 Protein Homology CDS 2436543 2436932 . - 0 ID=cds-WP_003411357.1;Parent=gene-AL42_RS16635;Dbxref=GenBank:WP_003411357.1;Name=WP_003411357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216702.1;locus_tag=AL42_RS16635;product=hypothetical protein;protein_id=WP_003411357.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2437098 2438900 . + . ID=gene-AL42_RS16640;Name=AL42_RS16640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16640;old_locus_tag=AL42_02259 NZ_KK316784.1 Protein Homology CDS 2437098 2438900 . + 0 ID=cds-WP_003901348.1;Parent=gene-AL42_RS16640;Dbxref=GenBank:WP_003901348.1;Name=WP_003901348.1;Ontology_term=GO:0005524,GO:0015645;gbkey=CDS;go_function=ATP binding|0005524||IEA,fatty acid ligase activity|0015645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216703.1;locus_tag=AL42_RS16640;product=AMP-dependent synthetase/ligase;protein_id=WP_003901348.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2438931 2440088 . - . ID=gene-AL42_RS16645;Name=pimB;gbkey=Gene;gene=pimB;gene_biotype=protein_coding;locus_tag=AL42_RS16645;old_locus_tag=AL42_02260 NZ_KK316784.1 Protein Homology CDS 2438931 2440088 . - 0 ID=cds-WP_003411369.1;Parent=gene-AL42_RS16645;Dbxref=GenBank:WP_003411369.1;Name=WP_003411369.1;gbkey=CDS;gene=pimB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216704.2;locus_tag=AL42_RS16645;product=GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase;protein_id=WP_003411369.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2440185 2440958 . - . ID=gene-AL42_RS16650;Name=AL42_RS16650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16650;old_locus_tag=AL42_02261 NZ_KK316784.1 Protein Homology CDS 2440185 2440958 . - 0 ID=cds-WP_003411371.1;Parent=gene-AL42_RS16650;Dbxref=GenBank:WP_003411371.1;Name=WP_003411371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216705.1;locus_tag=AL42_RS16650;product=hypothetical protein;protein_id=WP_003411371.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2441053 2442210 . - . ID=gene-AL42_RS16655;Name=ripC;gbkey=Gene;gene=ripC;gene_biotype=protein_coding;locus_tag=AL42_RS16655;old_locus_tag=AL42_02262 NZ_KK316784.1 Protein Homology CDS 2441053 2442210 . - 0 ID=cds-WP_003411373.1;Parent=gene-AL42_RS16655;Dbxref=GenBank:WP_003411373.1;Name=WP_003411373.1;gbkey=CDS;gene=ripC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216706.1;locus_tag=AL42_RS16655;product=peptidoglycan hydrolase RipC;protein_id=WP_003411373.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2442396 2442674 . - . ID=gene-AL42_RS0105065;Name=AL42_RS0105065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0105065;old_locus_tag=AL42_02263 NZ_KK316784.1 Protein Homology CDS 2442396 2442674 . - 0 ID=cds-WP_003908818.1;Parent=gene-AL42_RS0105065;Dbxref=GenBank:WP_003908818.1;Name=WP_003908818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003908818.1;locus_tag=AL42_RS0105065;product=hypothetical protein;protein_id=WP_003908818.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2442781 2444631 . + . ID=gene-AL42_RS16660;Name=AL42_RS16660;end_range=2444631,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS16660;old_locus_tag=AL42_02264;partial=true;pseudo=true NZ_KK316784.1 Protein Homology CDS 2442781 2444631 . + 0 ID=cds-AL42_RS16660;Parent=gene-AL42_RS16660;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2444631,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF005903.0;locus_tag=AL42_RS16660;partial=true;product=DEDD exonuclease domain-containing protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 2444569 2445681 . - . ID=gene-AL42_RS26055;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=AL42_RS26055;old_locus_tag=AL42_02265 NZ_KK316784.1 Protein Homology CDS 2444569 2445681 . - 0 ID=cds-WP_003411387.1;Parent=gene-AL42_RS26055;Dbxref=GenBank:WP_003411387.1;Name=WP_003411387.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216708.1;locus_tag=AL42_RS26055;product=anthranilate phosphoribosyltransferase;protein_id=WP_003411387.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2445839 2446450 . + . ID=gene-AL42_RS16665;Name=ctaE;gbkey=Gene;gene=ctaE;gene_biotype=protein_coding;locus_tag=AL42_RS16665;old_locus_tag=AL42_02266 NZ_KK316784.1 Protein Homology CDS 2445839 2446450 . + 0 ID=cds-WP_003411389.1;Parent=gene-AL42_RS16665;Dbxref=GenBank:WP_003411389.1;Name=WP_003411389.1;gbkey=CDS;gene=ctaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216709.1;locus_tag=AL42_RS16665;product=aa3-type cytochrome oxidase subunit III;protein_id=WP_003411389.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2446491 2447333 . + . ID=gene-AL42_RS16670;Name=qcrC;gbkey=Gene;gene=qcrC;gene_biotype=protein_coding;locus_tag=AL42_RS16670;old_locus_tag=AL42_02267 NZ_KK316784.1 Protein Homology CDS 2446491 2447333 . + 0 ID=cds-WP_003411392.1;Parent=gene-AL42_RS16670;Dbxref=GenBank:WP_003411392.1;Name=WP_003411392.1;gbkey=CDS;gene=qcrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216710.1;locus_tag=AL42_RS16670;product=cytochrome bc1 complex diheme cytochrome c subunit;protein_id=WP_003411392.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2447336 2447407 . + . ID=gene-AL42_RS27990;Name=AL42_RS27990;end_range=2447407,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS27990;partial=true;pseudo=true;start_range=.,2447336 NZ_KK316784.1 Protein Homology CDS 2447336 2447407 . + 0 ID=cds-AL42_RS27990;Parent=gene-AL42_RS27990;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2447407,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217793.1;locus_tag=AL42_RS27990;partial=true;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;pseudo=true;start_range=.,2447336;transl_table=11 NZ_KK316784.1 RefSeq gene 2447408 2448619 . + . ID=gene-AL42_RS16675;Name=qcrA;gbkey=Gene;gene=qcrA;gene_biotype=protein_coding;locus_tag=AL42_RS16675;old_locus_tag=AL42_02268 NZ_KK316784.1 Protein Homology CDS 2447408 2448619 . + 0 ID=cds-WP_003911816.1;Parent=gene-AL42_RS16675;Dbxref=GenBank:WP_003911816.1;Name=WP_003911816.1;gbkey=CDS;gene=qcrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911816.1;locus_tag=AL42_RS16675;product=cytochrome bc1 complex Rieske iron-sulfur subunit;protein_id=WP_003911816.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2448616 2450265 . + . ID=gene-AL42_RS16680;Name=qcrB;gbkey=Gene;gene=qcrB;gene_biotype=protein_coding;locus_tag=AL42_RS16680;old_locus_tag=AL42_02269 NZ_KK316784.1 Protein Homology CDS 2448616 2450265 . + 0 ID=cds-WP_003899212.1;Parent=gene-AL42_RS16680;Dbxref=GenBank:WP_003899212.1;Name=WP_003899212.1;gbkey=CDS;gene=qcrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216712.1;locus_tag=AL42_RS16680;product=cytochrome bc1 complex cytochrome b subunit;protein_id=WP_003899212.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2450385 2451029 . - . ID=gene-AL42_RS16685;Name=AL42_RS16685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16685;old_locus_tag=AL42_02270 NZ_KK316784.1 Protein Homology CDS 2450385 2451029 . - 0 ID=cds-WP_003899213.1;Parent=gene-AL42_RS16685;Dbxref=GenBank:WP_003899213.1;Name=WP_003899213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216713.1;locus_tag=AL42_RS16685;product=DUF2561 family protein;protein_id=WP_003899213.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2451029 2451928 . - . ID=gene-AL42_RS16690;Name=AL42_RS16690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16690;old_locus_tag=AL42_02271 NZ_KK316784.1 Protein Homology CDS 2451029 2451928 . - 0 ID=cds-WP_003411405.1;Parent=gene-AL42_RS16690;Dbxref=GenBank:WP_003411405.1;Name=WP_003411405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216714.1;locus_tag=AL42_RS16690;product=MmpS family transport accessory protein;protein_id=WP_003411405.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2452114 2452533 . - . ID=gene-AL42_RS16695;Name=AL42_RS16695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16695;old_locus_tag=AL42_02272 NZ_KK316784.1 Protein Homology CDS 2452114 2452533 . - 0 ID=cds-WP_003411408.1;Parent=gene-AL42_RS16695;Dbxref=GenBank:WP_003411408.1;Name=WP_003411408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216715.1;locus_tag=AL42_RS16695;product=cytochrome c oxidase subunit 4;protein_id=WP_003411408.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2452541 2453632 . - . ID=gene-AL42_RS16700;Name=ctaC;gbkey=Gene;gene=ctaC;gene_biotype=protein_coding;locus_tag=AL42_RS16700;old_locus_tag=AL42_02273 NZ_KK316784.1 Protein Homology CDS 2452541 2453632 . - 0 ID=cds-WP_003899214.1;Parent=gene-AL42_RS16700;Dbxref=GenBank:WP_003899214.1;Name=WP_003899214.1;gbkey=CDS;gene=ctaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216716.1;locus_tag=AL42_RS16700;product=aa3-type cytochrome oxidase subunit II;protein_id=WP_003899214.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2453878 2455836 . + . ID=gene-AL42_RS16705;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=AL42_RS16705;old_locus_tag=AL42_02274 NZ_KK316784.1 Protein Homology CDS 2453878 2455836 . + 0 ID=cds-WP_003411413.1;Parent=gene-AL42_RS16705;Dbxref=GenBank:WP_003411413.1;Name=WP_003411413.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216717.1;locus_tag=AL42_RS16705;product=asparagine synthase (glutamine-hydrolyzing);protein_id=WP_003411413.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2455934 2456908 . - . ID=gene-AL42_RS16710;Name=adoK;gbkey=Gene;gene=adoK;gene_biotype=protein_coding;locus_tag=AL42_RS16710;old_locus_tag=AL42_02275 NZ_KK316784.1 Protein Homology CDS 2455934 2456908 . - 0 ID=cds-WP_003411414.1;Parent=gene-AL42_RS16710;Dbxref=GenBank:WP_003411414.1;Name=WP_003411414.1;Ontology_term=GO:0005975,GO:0016301;gbkey=CDS;gene=adoK;go_function=kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216718.1;locus_tag=AL42_RS16710;product=carbohydrate kinase family protein;protein_id=WP_003411414.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2457112 2457804 . + . ID=gene-AL42_RS16715;Name=AL42_RS16715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16715;old_locus_tag=AL42_02276 NZ_KK316784.1 Protein Homology CDS 2457112 2457804 . + 0 ID=cds-WP_003411415.1;Parent=gene-AL42_RS16715;Dbxref=GenBank:WP_003411415.1;Name=WP_003411415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216719.1;locus_tag=AL42_RS16715;product=Rv0361 family membrane protein;protein_id=WP_003411415.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2457812 2458168 . - . ID=gene-AL42_RS16720;Name=AL42_RS16720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16720;old_locus_tag=AL42_02277 NZ_KK316784.1 Protein Homology CDS 2457812 2458168 . - 0 ID=cds-WP_003411418.1;Parent=gene-AL42_RS16720;Dbxref=GenBank:WP_003411418.1;Name=WP_003411418.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216720.1;locus_tag=AL42_RS16720;product=HesB/IscA family protein;protein_id=WP_003411418.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2458268 2459344 . - . ID=gene-AL42_RS16725;Name=AL42_RS16725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16725;old_locus_tag=AL42_02278 NZ_KK316784.1 Protein Homology CDS 2458268 2459344 . - 0 ID=cds-WP_003411420.1;Parent=gene-AL42_RS16725;Dbxref=GenBank:WP_003411420.1;Name=WP_003411420.1;Ontology_term=GO:0016310,GO:0031388,GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;go_process=phosphorylation|0016310||IEA,organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216721.2;locus_tag=AL42_RS16725;product=glycerate kinase family protein;protein_id=WP_003411420.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2459503 2460213 . + . ID=gene-AL42_RS16730;Name=AL42_RS16730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16730;old_locus_tag=AL42_02279 NZ_KK316784.1 Protein Homology CDS 2459503 2460213 . + 0 ID=cds-WP_003411425.1;Parent=gene-AL42_RS16730;Dbxref=GenBank:WP_003411425.1;Name=WP_003411425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216722.2;locus_tag=AL42_RS16730;product=DUF3043 domain-containing protein;protein_id=WP_003411425.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2460292 2461377 . + . ID=gene-AL42_RS16735;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=AL42_RS16735;old_locus_tag=AL42_02280 NZ_KK316784.1 Protein Homology CDS 2460292 2461377 . + 0 ID=cds-WP_003411429.1;Parent=gene-AL42_RS16735;Dbxref=GenBank:WP_003411429.1;Name=WP_003411429.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216723.1;locus_tag=AL42_RS16735;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_003411429.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2461374 2462123 . + . ID=gene-AL42_RS16740;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=AL42_RS16740;old_locus_tag=AL42_02281 NZ_KK316784.1 Protein Homology CDS 2461374 2462123 . + 0 ID=cds-WP_003899217.1;Parent=gene-AL42_RS16740;Dbxref=GenBank:WP_003899217.1;Name=WP_003899217.1;gbkey=CDS;gene=cobS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216724.1;locus_tag=AL42_RS16740;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WP_003899217.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2462281 2463819 . + . ID=gene-AL42_RS16745;Name=AL42_RS16745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16745;old_locus_tag=AL42_02282 NZ_KK316784.1 Protein Homology CDS 2462281 2463819 . + 0 ID=cds-WP_003899218.1;Parent=gene-AL42_RS16745;Dbxref=GenBank:WP_003899218.1;Name=WP_003899218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216725.1;locus_tag=AL42_RS16745;product=hypothetical protein;protein_id=WP_003899218.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2463745 2464851 . - . ID=gene-AL42_RS16750;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=AL42_RS16750;old_locus_tag=AL42_02283 NZ_KK316784.1 Protein Homology CDS 2463745 2464851 . - 0 ID=cds-WP_003411438.1;Parent=gene-AL42_RS16750;Dbxref=GenBank:WP_003411438.1;Name=WP_003411438.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;gene=ilvE;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216726.1;locus_tag=AL42_RS16750;product=branched-chain amino acid aminotransferase;protein_id=WP_003411438.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2464923 2466026 . - . ID=gene-AL42_RS16755;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=AL42_RS16755;old_locus_tag=AL42_02284 NZ_KK316784.1 Protein Homology CDS 2464923 2466026 . - 0 ID=cds-WP_003899219.1;Parent=gene-AL42_RS16755;Dbxref=GenBank:WP_003899219.1;Name=WP_003899219.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010907977.1;locus_tag=AL42_RS16755;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_003899219.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2466071 2467207 . + . ID=gene-AL42_RS16760;Name=AL42_RS16760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16760;old_locus_tag=AL42_02285 NZ_KK316784.1 Protein Homology CDS 2466071 2467207 . + 0 ID=cds-WP_003411442.1;Parent=gene-AL42_RS16760;Dbxref=GenBank:WP_003411442.1;Name=WP_003411442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216728.1;locus_tag=AL42_RS16760;product=adenylyl cyclase;protein_id=WP_003411442.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2467219 2468766 . + . ID=gene-AL42_RS16765;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=AL42_RS16765;old_locus_tag=AL42_02286 NZ_KK316784.1 Protein Homology CDS 2467219 2468766 . + 0 ID=cds-WP_003899220.1;Parent=gene-AL42_RS16765;Dbxref=GenBank:WP_003899220.1;Name=WP_003899220.1;Ontology_term=GO:0006508,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216729.1;locus_tag=AL42_RS16765;product=leucyl aminopeptidase;protein_id=WP_003899220.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2468804 2470582 . - . ID=gene-AL42_RS16770;Name=ephD;gbkey=Gene;gene=ephD;gene_biotype=protein_coding;locus_tag=AL42_RS16770;old_locus_tag=AL42_02287 NZ_KK316784.1 Protein Homology CDS 2468804 2470582 . - 0 ID=cds-WP_003411445.1;Parent=gene-AL42_RS16770;Dbxref=GenBank:WP_003411445.1;Name=WP_003411445.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ephD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216730.1;locus_tag=AL42_RS16770;product=SDR family oxidoreductase;protein_id=WP_003411445.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2470846 2472507 . + . ID=gene-AL42_RS16775;Name=sucB;gbkey=Gene;gene=sucB;gene_biotype=protein_coding;locus_tag=AL42_RS16775;old_locus_tag=AL42_02288 NZ_KK316784.1 Protein Homology CDS 2470846 2472507 . + 0 ID=cds-WP_003411450.1;Parent=gene-AL42_RS16775;Dbxref=GenBank:WP_003411450.1;Name=WP_003411450.1;Ontology_term=GO:0016746;gbkey=CDS;gene=sucB;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216731.1;locus_tag=AL42_RS16775;product=2-oxoglutarate dehydrogenase%2C E2 component%2C dihydrolipoamide succinyltransferase;protein_id=WP_003411450.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2472507 2473412 . + . ID=gene-AL42_RS16780;Name=AL42_RS16780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16780;old_locus_tag=AL42_02289 NZ_KK316784.1 Protein Homology CDS 2472507 2473412 . + 0 ID=cds-WP_003411454.1;Parent=gene-AL42_RS16780;Dbxref=GenBank:WP_003411454.1;Name=WP_003411454.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216732.1;locus_tag=AL42_RS16780;product=TIGR01777 family oxidoreductase;protein_id=WP_003411454.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2473465 2474157 . + . ID=gene-AL42_RS16785;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=AL42_RS16785;old_locus_tag=AL42_02290 NZ_KK316784.1 Protein Homology CDS 2473465 2474157 . + 0 ID=cds-WP_003411458.1;Parent=gene-AL42_RS16785;Dbxref=GenBank:WP_003411458.1;Name=WP_003411458.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216733.1;locus_tag=AL42_RS16785;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_003411458.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2474154 2475089 . + . ID=gene-AL42_RS16790;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=AL42_RS16790;old_locus_tag=AL42_02291 NZ_KK316784.1 Protein Homology CDS 2474154 2475089 . + 0 ID=cds-WP_003411460.1;Parent=gene-AL42_RS16790;Dbxref=GenBank:WP_003411460.1;Name=WP_003411460.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216734.1;locus_tag=AL42_RS16790;product=lipoyl synthase;protein_id=WP_003411460.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2475116 2475868 . + . ID=gene-AL42_RS16795;Name=AL42_RS16795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16795;old_locus_tag=AL42_02292 NZ_KK316784.1 Protein Homology CDS 2475116 2475868 . + 0 ID=cds-WP_003411463.1;Parent=gene-AL42_RS16795;Dbxref=GenBank:WP_003411463.1;Name=WP_003411463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216735.1;locus_tag=AL42_RS16795;product=DUF4191 domain-containing protein;protein_id=WP_003411463.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2475875 2476297 . - . ID=gene-AL42_RS16800;Name=AL42_RS16800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16800;old_locus_tag=AL42_02293 NZ_KK316784.1 Protein Homology CDS 2475875 2476297 . - 0 ID=cds-WP_003411466.1;Parent=gene-AL42_RS16800;Dbxref=GenBank:WP_003411466.1;Name=WP_003411466.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177661.1;locus_tag=AL42_RS16800;product=RDD family protein;protein_id=WP_003411466.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2476496 2477932 . + . ID=gene-AL42_RS16805;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=AL42_RS16805;old_locus_tag=AL42_02294 NZ_KK316784.1 Protein Homology CDS 2476496 2477932 . + 0 ID=cds-WP_003411475.1;Parent=gene-AL42_RS16805;Dbxref=GenBank:WP_003411475.1;Name=WP_003411475.1;Ontology_term=GO:0006542,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216736.1;locus_tag=AL42_RS16805;product=type I glutamate--ammonia ligase;protein_id=WP_003411475.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2478250 2481234 . - . ID=gene-AL42_RS16810;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=AL42_RS16810;old_locus_tag=AL42_02295 NZ_KK316784.1 Protein Homology CDS 2478250 2481234 . - 0 ID=cds-WP_003411478.1;Parent=gene-AL42_RS16810;Dbxref=GenBank:WP_003411478.1;Name=WP_003411478.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216737.1;locus_tag=AL42_RS16810;product=bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase;protein_id=WP_003411478.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2481283 2482623 . - . ID=gene-AL42_RS16815;Name=AL42_RS16815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16815;old_locus_tag=AL42_02296 NZ_KK316784.1 Protein Homology CDS 2481283 2482623 . - 0 ID=cds-WP_003411482.1;Parent=gene-AL42_RS16815;Dbxref=GenBank:WP_003411482.1;Name=WP_003411482.1;Ontology_term=GO:0006542,GO:0004356,GO:0005524,GO:0046872;gbkey=CDS;go_function=glutamine synthetase activity|0004356||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216738.1;locus_tag=AL42_RS16815;product=glutamine synthetase family protein;protein_id=WP_003411482.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2482718 2484280 . - . ID=gene-AL42_RS16820;Name=caeB;gbkey=Gene;gene=caeB;gene_biotype=protein_coding;locus_tag=AL42_RS16820;old_locus_tag=AL42_02297 NZ_KK316784.1 Protein Homology CDS 2482718 2484280 . - 0 ID=cds-WP_003411484.1;Parent=gene-AL42_RS16820;Dbxref=GenBank:WP_003411484.1;Name=WP_003411484.1;gbkey=CDS;gene=caeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216739.1;locus_tag=AL42_RS16820;product=carboxylesterase CaeB;protein_id=WP_003411484.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2484342 2485904 . - . ID=gene-AL42_RS16825;Name=caeA;gbkey=Gene;gene=caeA;gene_biotype=protein_coding;locus_tag=AL42_RS16825;old_locus_tag=AL42_02298 NZ_KK316784.1 Protein Homology CDS 2484342 2485904 . - 0 ID=cds-WP_003411486.1;Parent=gene-AL42_RS16825;Dbxref=GenBank:WP_003411486.1;Name=WP_003411486.1;gbkey=CDS;gene=caeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216740.1;locus_tag=AL42_RS16825;product=carboxylesterase CaeA;protein_id=WP_003411486.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2486106 2486327 . - . ID=gene-AL42_RS0105080;Name=AL42_RS0105080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0105080 NZ_KK316784.1 Protein Homology CDS 2486106 2486327 . - 0 ID=cds-WP_012054189.1;Parent=gene-AL42_RS0105080;Dbxref=GenBank:WP_012054189.1;Name=WP_012054189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030036.1;locus_tag=AL42_RS0105080;product=hypothetical protein;protein_id=WP_012054189.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2486622 2487467 . + . ID=gene-AL42_RS16830;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=AL42_RS16830;old_locus_tag=AL42_02299 NZ_KK316784.1 Protein Homology CDS 2486622 2487467 . + 0 ID=cds-WP_003411489.1;Parent=gene-AL42_RS16830;Dbxref=GenBank:WP_003411489.1;Name=WP_003411489.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216741.1;locus_tag=AL42_RS16830;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_003411489.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2487712 2489253 . + . ID=gene-AL42_RS16835;Name=AL42_RS16835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16835;old_locus_tag=AL42_02300 NZ_KK316784.1 Protein Homology CDS 2487712 2489253 . + 0 ID=cds-WP_003899224.1;Parent=gene-AL42_RS16835;Dbxref=GenBank:WP_003899224.1;Name=WP_003899224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216742.1;locus_tag=AL42_RS16835;product=CYTH and CHAD domain-containing protein;protein_id=WP_003899224.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2489266 2489694 . - . ID=gene-AL42_RS23255;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=AL42_RS23255 NZ_KK316784.1 cmsearch RNase_P_RNA 2489266 2489694 . - . ID=rna-AL42_RS23255;Parent=gene-AL42_RS23255;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AL42_RS23255;product=RNase P RNA component class A NZ_KK316784.1 cmsearch exon 2489266 2489694 . - . ID=exon-AL42_RS23255-1;Parent=rna-AL42_RS23255;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AL42_RS23255;product=RNase P RNA component class A NZ_KK316784.1 RefSeq pseudogene 2489803 2490512 . + . ID=gene-AL42_RS16840;Name=AL42_RS16840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS16840;old_locus_tag=AL42_02301;pseudo=true NZ_KK316784.1 Protein Homology CDS 2489803 2490512 . + 0 ID=cds-AL42_RS16840;Parent=gene-AL42_RS16840;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007170864.1;locus_tag=AL42_RS16840;product=2OG-Fe(II) oxygenase;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 2490524 2491618 . - . ID=gene-AL42_RS16845;Name=AL42_RS16845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16845;old_locus_tag=AL42_02302 NZ_KK316784.1 Protein Homology CDS 2490524 2491618 . - 0 ID=cds-WP_003899226.1;Parent=gene-AL42_RS16845;Dbxref=GenBank:WP_003899226.1;Name=WP_003899226.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003872350.1;locus_tag=AL42_RS16845;product=bifunctional RNase H/acid phosphatase;protein_id=WP_003899226.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2491615 2492352 . - . ID=gene-AL42_RS16850;Name=AL42_RS16850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16850;old_locus_tag=AL42_02303 NZ_KK316784.1 Protein Homology CDS 2491615 2492352 . - 0 ID=cds-WP_003411501.1;Parent=gene-AL42_RS16850;Dbxref=GenBank:WP_003411501.1;Name=WP_003411501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216745.1;locus_tag=AL42_RS16850;product=zinc ribbon domain-containing protein;protein_id=WP_003411501.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2492349 2493488 . - . ID=gene-AL42_RS16855;Name=AL42_RS16855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16855;old_locus_tag=AL42_02304 NZ_KK316784.1 Protein Homology CDS 2492349 2493488 . - 0 ID=cds-WP_003411502.1;Parent=gene-AL42_RS16855;Dbxref=GenBank:WP_003411502.1;Name=WP_003411502.1;Ontology_term=GO:0051540,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=metal cluster binding|0051540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216746.1;locus_tag=AL42_RS16855;product=Nif3-like dinuclear metal center hexameric protein;protein_id=WP_003411502.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2493485 2494570 . - . ID=gene-AL42_RS16860;Name=cobC;gbkey=Gene;gene=cobC;gene_biotype=protein_coding;locus_tag=AL42_RS16860;old_locus_tag=AL42_02305 NZ_KK316784.1 Protein Homology CDS 2493485 2494570 . - 0 ID=cds-WP_079092157.1;Parent=gene-AL42_RS16860;Dbxref=GenBank:WP_079092157.1;Name=WP_079092157.1;Ontology_term=GO:0009236,GO:0030170;gbkey=CDS;gene=cobC;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: protein motif:HMM:NF005915.0;locus_tag=AL42_RS16860;product=Rv2231c family histidinol phosphate aminotransferase CobC;protein_id=WP_079092157.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2494616 2495041 . - . ID=gene-AL42_RS16865;Name=AL42_RS16865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16865;old_locus_tag=AL42_02306 NZ_KK316784.1 Protein Homology CDS 2494616 2495041 . - 0 ID=cds-WP_010886140.1;Parent=gene-AL42_RS16865;Dbxref=GenBank:WP_010886140.1;Name=WP_010886140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007410917.1;locus_tag=AL42_RS16865;product=PIN domain-containing protein;protein_id=WP_010886140.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2495087 2495263 . - . ID=gene-AL42_RS27235;Name=AL42_RS27235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27235;old_locus_tag=AL42_02307 NZ_KK316784.1 Protein Homology CDS 2495087 2495263 . - 0 ID=cds-WP_003903810.1;Parent=gene-AL42_RS27235;Dbxref=GenBank:WP_003903810.1;Name=WP_003903810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007410918.1;locus_tag=AL42_RS27235;product=antitoxin VapB16;protein_id=WP_003903810.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2495308 2496033 . + . ID=gene-AL42_RS0105085;Name=ptkA;gbkey=Gene;gene=ptkA;gene_biotype=protein_coding;locus_tag=AL42_RS0105085;old_locus_tag=AL42_02308 NZ_KK316784.1 Protein Homology CDS 2495308 2496033 . + 0 ID=cds-WP_015288273.1;Parent=gene-AL42_RS0105085;Dbxref=GenBank:WP_015288273.1;Name=WP_015288273.1;gbkey=CDS;gene=ptkA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015290517.1;locus_tag=AL42_RS0105085;product=Rv2232 family HAD-type protein-tyrosine kinase;protein_id=WP_015288273.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2496026 2496517 . + . ID=gene-AL42_RS16875;Name=ptpA;gbkey=Gene;gene=ptpA;gene_biotype=protein_coding;locus_tag=AL42_RS16875;old_locus_tag=AL42_02309 NZ_KK316784.1 Protein Homology CDS 2496026 2496517 . + 0 ID=cds-WP_003411510.1;Parent=gene-AL42_RS16875;Dbxref=GenBank:WP_003411510.1;Name=WP_003411510.1;gbkey=CDS;gene=ptpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216750.1;locus_tag=AL42_RS16875;product=protein-tyrosine-phosphatase;protein_id=WP_003411510.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2496517 2497332 . + . ID=gene-AL42_RS16880;Name=AL42_RS16880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16880;old_locus_tag=AL42_02310 NZ_KK316784.1 Protein Homology CDS 2496517 2497332 . + 0 ID=cds-WP_003411514.1;Parent=gene-AL42_RS16880;Dbxref=GenBank:WP_003411514.1;Name=WP_003411514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216751.1;locus_tag=AL42_RS16880;product=SURF1 family cytochrome oxidase biogenesis protein;protein_id=WP_003411514.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2497314 2498255 . - . ID=gene-AL42_RS16885;Name=cobD;gbkey=Gene;gene=cobD;gene_biotype=protein_coding;locus_tag=AL42_RS16885;old_locus_tag=AL42_02311 NZ_KK316784.1 Protein Homology CDS 2497314 2498255 . - 0 ID=cds-WP_003901355.1;Parent=gene-AL42_RS16885;Dbxref=GenBank:WP_003901355.1;Name=WP_003901355.1;Ontology_term=GO:0009236,GO:0048472;gbkey=CDS;gene=cobD;go_function=threonine-phosphate decarboxylase activity|0048472||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216752.1;locus_tag=AL42_RS16885;product=cobalamin biosynthesis protein;protein_id=WP_003901355.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2498321 2499136 . + . ID=gene-AL42_RS16890;Name=AL42_RS16890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16890;old_locus_tag=AL42_02312 NZ_KK316784.1 Protein Homology CDS 2498321 2499136 . + 0 ID=cds-WP_003411520.1;Parent=gene-AL42_RS16890;Dbxref=GenBank:WP_003411520.1;Name=WP_003411520.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003411520.1;locus_tag=AL42_RS16890;product=oxygenase MpaB family protein;protein_id=WP_003411520.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2499231 2499356 . - . ID=gene-AL42_RS27855;Name=AL42_RS27855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27855 NZ_KK316784.1 GeneMarkS-2+ CDS 2499231 2499356 . - 0 ID=cds-WP_009936466.1;Parent=gene-AL42_RS27855;Dbxref=GenBank:WP_009936466.1;Name=WP_009936466.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL42_RS27855;product=hypothetical protein;protein_id=WP_009936466.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2499478 2499549 . - . ID=gene-AL42_RS16900;Name=AL42_RS16900;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL42_RS16900;old_locus_tag=AL42_02314 NZ_KK316784.1 tRNAscan-SE tRNA 2499478 2499549 . - . ID=rna-AL42_RS16900;Parent=gene-AL42_RS16900;anticodon=(pos:complement(2499515..2499517));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS16900;product=tRNA-Val NZ_KK316784.1 tRNAscan-SE exon 2499478 2499549 . - . ID=exon-AL42_RS16900-1;Parent=rna-AL42_RS16900;anticodon=(pos:complement(2499515..2499517));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS16900;product=tRNA-Val NZ_KK316784.1 RefSeq gene 2499595 2500056 . - . ID=gene-AL42_RS16905;Name=ahpE;gbkey=Gene;gene=ahpE;gene_biotype=protein_coding;locus_tag=AL42_RS16905;old_locus_tag=AL42_02315 NZ_KK316784.1 Protein Homology CDS 2499595 2500056 . - 0 ID=cds-WP_003411527.1;Parent=gene-AL42_RS16905;Dbxref=GenBank:WP_003411527.1;Name=WP_003411527.1;gbkey=CDS;gene=ahpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216754.1;locus_tag=AL42_RS16905;product=peroxiredoxin AhpE;protein_id=WP_003411527.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2500056 2500478 . - . ID=gene-AL42_RS16910;Name=AL42_RS16910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16910;old_locus_tag=AL42_02316 NZ_KK316784.1 Protein Homology CDS 2500056 2500478 . - 0 ID=cds-WP_003911787.1;Parent=gene-AL42_RS16910;Dbxref=GenBank:WP_003911787.1;Name=WP_003911787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911787.1;locus_tag=AL42_RS16910;product=DUF3052 domain-containing protein;protein_id=WP_003911787.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2500570 2501160 . - . ID=gene-AL42_RS16915;Name=AL42_RS16915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16915;old_locus_tag=AL42_02317 NZ_KK316784.1 Protein Homology CDS 2500570 2501160 . - 0 ID=cds-WP_003911826.1;Parent=gene-AL42_RS16915;Dbxref=GenBank:WP_003911826.1;Name=WP_003911826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216756.2;locus_tag=AL42_RS16915;product=hypothetical protein;protein_id=WP_003911826.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2501332 2504124 . + . ID=gene-AL42_RS16920;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=AL42_RS16920;old_locus_tag=AL42_02318 NZ_KK316784.1 Protein Homology CDS 2501332 2504124 . + 0 ID=cds-WP_003911788.1;Parent=gene-AL42_RS16920;Dbxref=GenBank:WP_003911788.1;Name=WP_003911788.1;Ontology_term=GO:0006086,GO:0045254;gbkey=CDS;gene=aceE;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911788.1;locus_tag=AL42_RS16920;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_003911788.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2504184 2505428 . + . ID=gene-AL42_RS16925;Name=AL42_RS16925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16925;old_locus_tag=AL42_02319 NZ_KK316784.1 Protein Homology CDS 2504184 2505428 . + 0 ID=cds-WP_003411543.1;Parent=gene-AL42_RS16925;Dbxref=GenBank:WP_003411543.1;Name=WP_003411543.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216758.1;locus_tag=AL42_RS16925;product=PucR family transcriptional regulator;protein_id=WP_003411543.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2505667 2506575 . + . ID=gene-AL42_RS16930;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=AL42_RS16930;old_locus_tag=AL42_02320 NZ_KK316784.1 Protein Homology CDS 2505667 2506575 . + 0 ID=cds-WP_003411559.1;Parent=gene-AL42_RS16930;Dbxref=GenBank:WP_003411559.1;Name=WP_003411559.1;gbkey=CDS;gene=fabD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216759.1;locus_tag=AL42_RS16930;product=malonyl CoA-acyl carrier protein transacylase;protein_id=WP_003411559.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2506651 2506998 . + . ID=gene-AL42_RS16935;Name=acpM;gbkey=Gene;gene=acpM;gene_biotype=protein_coding;locus_tag=AL42_RS16935;old_locus_tag=AL42_02321 NZ_KK316784.1 Protein Homology CDS 2506651 2506998 . + 0 ID=cds-WP_003411565.1;Parent=gene-AL42_RS16935;Dbxref=GenBank:WP_003411565.1;Name=WP_003411565.1;Ontology_term=GO:0071768;gbkey=CDS;gene=acpM;go_process=mycolic acid biosynthetic process|0071768||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216760.1;locus_tag=AL42_RS16935;product=meromycolate extension acyl carrier protein AcpM;protein_id=WP_003411565.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2506995 2508245 . + . ID=gene-AL42_RS16940;Name=kasA;gbkey=Gene;gene=kasA;gene_biotype=protein_coding;locus_tag=AL42_RS16940;old_locus_tag=AL42_02322 NZ_KK316784.1 Protein Homology CDS 2506995 2508245 . + 0 ID=cds-WP_003411571.1;Parent=gene-AL42_RS16940;Dbxref=GenBank:WP_003411571.1;Name=WP_003411571.1;gbkey=CDS;gene=kasA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216761.1;locus_tag=AL42_RS16940;product=3-oxoacyl-ACP synthase KasA;protein_id=WP_003411571.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2508339 2509592 . + . ID=gene-AL42_RS16945;Name=kasB;gbkey=Gene;gene=kasB;gene_biotype=protein_coding;locus_tag=AL42_RS16945;old_locus_tag=AL42_02323 NZ_KK316784.1 Protein Homology CDS 2508339 2509592 . + 0 ID=cds-WP_003411576.1;Parent=gene-AL42_RS16945;Dbxref=GenBank:WP_003411576.1;Name=WP_003411576.1;gbkey=CDS;gene=kasB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003411576.1;locus_tag=AL42_RS16945;product=3-oxoacyl-ACP synthase KasB;protein_id=WP_003411576.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2509623 2511044 . + . ID=gene-AL42_RS16950;Name=AL42_RS16950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16950;old_locus_tag=AL42_02324 NZ_KK316784.1 Protein Homology CDS 2509623 2511044 . + 0 ID=cds-WP_003901360.1;Parent=gene-AL42_RS16950;Dbxref=GenBank:WP_003901360.1;Name=WP_003901360.1;Ontology_term=GO:0006633,GO:0003989,GO:0016874,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,ligase activity|0016874||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216763.1;locus_tag=AL42_RS16950;product=acyl-CoA carboxylase subunit beta;protein_id=WP_003901360.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2511168 2512055 . + . ID=gene-AL42_RS16955;Name=AL42_RS16955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16955;old_locus_tag=AL42_02325 NZ_KK316784.1 Protein Homology CDS 2511168 2512055 . + 0 ID=cds-WP_014584819.1;Parent=gene-AL42_RS16955;Dbxref=GenBank:WP_014584819.1;Name=WP_014584819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584819.1;locus_tag=AL42_RS16955;product=hypothetical protein;protein_id=WP_014584819.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2512124 2513674 . - . ID=gene-AL42_RS16960;Name=AL42_RS16960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16960;old_locus_tag=AL42_02326 NZ_KK316784.1 Protein Homology CDS 2512124 2513674 . - 0 ID=cds-WP_003411591.1;Parent=gene-AL42_RS16960;Dbxref=GenBank:WP_003411591.1;Name=WP_003411591.1;Ontology_term=GO:0006072,GO:0004368,GO:0071949,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FAD binding|0071949||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216765.1;locus_tag=AL42_RS16960;product=glycerol-3-phosphate dehydrogenase/oxidase;protein_id=WP_003411591.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2513668 2514237 . - . ID=gene-AL42_RS16965;Name=AL42_RS16965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16965;old_locus_tag=AL42_02327 NZ_KK316784.1 Protein Homology CDS 2513668 2514237 . - 0 ID=cds-WP_003411595.1;Parent=gene-AL42_RS16965;Dbxref=GenBank:WP_003411595.1;Name=WP_003411595.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216766.2;locus_tag=AL42_RS16965;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003411595.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2514285 2515874 . + . ID=gene-AL42_RS16970;Name=AL42_RS16970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16970;old_locus_tag=AL42_02328 NZ_KK316784.1 Protein Homology CDS 2514285 2515874 . + 0 ID=cds-WP_003411596.1;Parent=gene-AL42_RS16970;Dbxref=GenBank:WP_003411596.1;Name=WP_003411596.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015575176.1;locus_tag=AL42_RS16970;product=FAD-binding oxidoreductase;protein_id=WP_003411596.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2515871 2516800 . + . ID=gene-AL42_RS16975;Name=AL42_RS16975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16975;old_locus_tag=AL42_02329 NZ_KK316784.1 Protein Homology CDS 2515871 2516800 . + 0 ID=cds-WP_003411603.1;Parent=gene-AL42_RS16975;Dbxref=GenBank:WP_003411603.1;Name=WP_003411603.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216768.1;locus_tag=AL42_RS16975;product=diacylglycerol kinase;protein_id=WP_003411603.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2516866 2517369 . + . ID=gene-AL42_RS16980;Name=AL42_RS16980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16980;old_locus_tag=AL42_02330 NZ_KK316784.1 Protein Homology CDS 2516866 2517369 . + 0 ID=cds-WP_003411608.1;Parent=gene-AL42_RS16980;Dbxref=GenBank:WP_003411608.1;Name=WP_003411608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216769.1;locus_tag=AL42_RS16980;product=Rv2253 family sensor-like surface protein;protein_id=WP_003411608.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2517402 2517857 . - . ID=gene-AL42_RS16985;Name=AL42_RS16985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16985;old_locus_tag=AL42_02331 NZ_KK316784.1 Protein Homology CDS 2517402 2517857 . - 0 ID=cds-WP_003411611.1;Parent=gene-AL42_RS16985;Dbxref=GenBank:WP_003411611.1;Name=WP_003411611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216770.1;locus_tag=AL42_RS16985;product=LysE family transporter;protein_id=WP_003411611.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2517862 2518056 . - . ID=gene-AL42_RS16990;Name=AL42_RS16990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16990;old_locus_tag=AL42_02332 NZ_KK316784.1 Protein Homology CDS 2517862 2518056 . - 0 ID=cds-WP_003902152.1;Parent=gene-AL42_RS16990;Dbxref=GenBank:WP_003902152.1;Name=WP_003902152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030037.1;locus_tag=AL42_RS16990;product=hypothetical protein;protein_id=WP_003902152.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2517976 2518194 . + . ID=gene-AL42_RS16995;Name=AL42_RS16995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS16995;old_locus_tag=AL42_02333 NZ_KK316784.1 Protein Homology CDS 2517976 2518194 . + 0 ID=cds-WP_003411612.1;Parent=gene-AL42_RS16995;Dbxref=GenBank:WP_003411612.1;Name=WP_003411612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003411612.1;locus_tag=AL42_RS16995;product=Lrp/AsnC ligand binding domain-containing protein;protein_id=WP_003411612.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2518223 2518735 . - . ID=gene-AL42_RS17000;Name=AL42_RS17000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17000;old_locus_tag=AL42_02334 NZ_KK316784.1 Protein Homology CDS 2518223 2518735 . - 0 ID=cds-WP_003411615.1;Parent=gene-AL42_RS17000;Dbxref=GenBank:WP_003411615.1;Name=WP_003411615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005085219.1;locus_tag=AL42_RS17000;product=DUF3145 domain-containing protein;protein_id=WP_003411615.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2518886 2519704 . - . ID=gene-AL42_RS17005;Name=AL42_RS17005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17005;old_locus_tag=AL42_02335 NZ_KK316784.1 Protein Homology CDS 2518886 2519704 . - 0 ID=cds-WP_003411619.1;Parent=gene-AL42_RS17005;Dbxref=GenBank:WP_003411619.1;Name=WP_003411619.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216773.1;locus_tag=AL42_RS17005;product=serine hydrolase domain-containing protein;protein_id=WP_003411619.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2519718 2520779 . - . ID=gene-AL42_RS17010;Name=AL42_RS17010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17010;old_locus_tag=AL42_02336 NZ_KK316784.1 Protein Homology CDS 2519718 2520779 . - 0 ID=cds-WP_003411622.1;Parent=gene-AL42_RS17010;Dbxref=GenBank:WP_003411622.1;Name=WP_003411622.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216774.1;locus_tag=AL42_RS17010;product=class I SAM-dependent methyltransferase;protein_id=WP_003411622.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2521127 2522212 . + . ID=gene-AL42_RS17015;Name=mscR;gbkey=Gene;gene=mscR;gene_biotype=protein_coding;locus_tag=AL42_RS17015;old_locus_tag=AL42_02337 NZ_KK316784.1 Protein Homology CDS 2521127 2522212 . + 0 ID=cds-WP_003899236.1;Parent=gene-AL42_RS17015;Dbxref=GenBank:WP_003899236.1;Name=WP_003899236.1;Ontology_term=GO:0010127,GO:0050607;gbkey=CDS;gene=mscR;go_function=mycothiol-dependent formaldehyde dehydrogenase activity|0050607||IEA;go_process=mycothiol-dependent detoxification|0010127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216775.1;locus_tag=AL42_RS17015;product=S-(hydroxymethyl)mycothiol dehydrogenase;protein_id=WP_003899236.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2522212 2522847 . + . ID=gene-AL42_RS17020;Name=AL42_RS17020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17020;old_locus_tag=AL42_02338 NZ_KK316784.1 Protein Homology CDS 2522212 2522847 . + 0 ID=cds-WP_003411632.1;Parent=gene-AL42_RS17020;Dbxref=GenBank:WP_003411632.1;Name=WP_003411632.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216776.1;locus_tag=AL42_RS17020;product=MBL fold metallo-hydrolase;protein_id=WP_003411632.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2522924 2524309 . - . ID=gene-AL42_RS17025;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=AL42_RS17025;old_locus_tag=AL42_02339 NZ_KK316784.1 Protein Homology CDS 2522924 2524309 . - 0 ID=cds-WP_019249811.1;Parent=gene-AL42_RS17025;Dbxref=GenBank:WP_019249811.1;Name=WP_019249811.1;Ontology_term=GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019249811.1;locus_tag=AL42_RS17025;product=apolipoprotein N-acyltransferase;protein_id=WP_019249811.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2524312 2524764 . + . ID=gene-AL42_RS17030;Name=AL42_RS17030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS17030;old_locus_tag=AL42_02340;partial=true;pseudo=true;start_range=.,2524312 NZ_KK316784.1 Protein Homology CDS 2524312 2524764 . + 0 ID=cds-AL42_RS17030;Parent=gene-AL42_RS17030;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216779.1;locus_tag=AL42_RS17030;partial=true;product=short chain dehydrogenase;pseudo=true;start_range=.,2524312;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2524742 2526521 . - . ID=gene-AL42_RS17035;Name=AL42_RS17035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS17035;old_locus_tag=AL42_02341;pseudo=true NZ_KK316784.1 Protein Homology CDS 2524742 2526521 . - 0 ID=cds-AL42_RS17035;Parent=gene-AL42_RS17035;Note=frameshifted;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216780.1;locus_tag=AL42_RS17035;product=Hsp70 family protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 2526871 2528100 . + . ID=gene-AL42_RS17040;Name=AL42_RS17040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17040;old_locus_tag=AL42_02342 NZ_KK316784.1 Protein Homology CDS 2526871 2528100 . + 0 ID=cds-WP_003899241.1;Parent=gene-AL42_RS17040;Dbxref=GenBank:WP_003899241.1;Name=WP_003899241.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216781.1;locus_tag=AL42_RS17040;product=MFS transporter;protein_id=WP_003899241.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2528275 2529561 . + . ID=gene-AL42_RS17045;Name=cyp124;gbkey=Gene;gene=cyp124;gene_biotype=protein_coding;locus_tag=AL42_RS17045;old_locus_tag=AL42_02343 NZ_KK316784.1 Protein Homology CDS 2528275 2529561 . + 0 ID=cds-WP_003411654.1;Parent=gene-AL42_RS17045;Dbxref=GenBank:WP_003411654.1;Name=WP_003411654.1;gbkey=CDS;gene=cyp124;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216782.1;locus_tag=AL42_RS17045;product=methyl-branched lipid omega-hydroxylase Cyp124;protein_id=WP_003411654.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2529815 2530981 . - . ID=gene-AL42_RS17050;Name=AL42_RS17050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17050;old_locus_tag=AL42_02344 NZ_KK316784.1 Protein Homology CDS 2529815 2530981 . - 0 ID=cds-WP_003411661.1;Parent=gene-AL42_RS17050;Dbxref=GenBank:WP_003411661.1;Name=WP_003411661.1;Ontology_term=GO:0008146,GO:0050656,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sulfotransferase activity|0008146||IEA,3'-phosphoadenosine 5'-phosphosulfate binding|0050656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216783.1;locus_tag=AL42_RS17050;product=sulfotransferase family protein;protein_id=WP_003411661.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2530978 2532447 . - . ID=gene-AL42_RS17055;Name=AL42_RS17055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17055;old_locus_tag=AL42_02345 NZ_KK316784.1 Protein Homology CDS 2530978 2532447 . - 0 ID=cds-WP_003411663.1;Parent=gene-AL42_RS17055;Dbxref=GenBank:WP_003411663.1;Name=WP_003411663.1;Ontology_term=GO:0004497,GO:0005506,GO:0016705,GO:0020037;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216784.1;locus_tag=AL42_RS17055;product=cytochrome P450;protein_id=WP_003411663.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2532460 2532792 . - . ID=gene-AL42_RS17060;Name=AL42_RS17060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17060;old_locus_tag=AL42_02346 NZ_KK316784.1 Protein Homology CDS 2532460 2532792 . - 0 ID=cds-WP_003902155.1;Parent=gene-AL42_RS17060;Dbxref=GenBank:WP_003902155.1;Name=WP_003902155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216785.1;locus_tag=AL42_RS17060;product=hypothetical protein;protein_id=WP_003902155.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2532869 2533396 . + . ID=gene-AL42_RS17065;Name=AL42_RS17065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17065;old_locus_tag=AL42_02347 NZ_KK316784.1 Protein Homology CDS 2532869 2533396 . + 0 ID=cds-WP_003411668.1;Parent=gene-AL42_RS17065;Dbxref=GenBank:WP_003411668.1;Name=WP_003411668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216786.1;locus_tag=AL42_RS17065;product=hypothetical protein;protein_id=WP_003411668.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2533503 2533802 . + . ID=gene-AL42_RS17070;Name=AL42_RS17070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17070;old_locus_tag=AL42_02348 NZ_KK316784.1 Protein Homology CDS 2533503 2533802 . + 0 ID=cds-WP_003899242.1;Parent=gene-AL42_RS17070;Dbxref=GenBank:WP_003899242.1;Name=WP_003899242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216787.1;locus_tag=AL42_RS17070;product=DUF2695 domain-containing protein;protein_id=WP_003899242.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2533908 2534276 . + . ID=gene-AL42_RS17075;Name=AL42_RS17075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17075;old_locus_tag=AL42_02349 NZ_KK316784.1 Protein Homology CDS 2533908 2534276 . + 0 ID=cds-WP_003411674.1;Parent=gene-AL42_RS17075;Dbxref=GenBank:WP_003411674.1;Name=WP_003411674.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216788.1;locus_tag=AL42_RS17075;product=YidH family protein;protein_id=WP_003411674.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2534273 2534602 . + . ID=gene-AL42_RS17080;Name=AL42_RS17080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17080;old_locus_tag=AL42_02350 NZ_KK316784.1 Protein Homology CDS 2534273 2534602 . + 0 ID=cds-WP_003411678.1;Parent=gene-AL42_RS17080;Dbxref=GenBank:WP_003411678.1;Name=WP_003411678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216789.1;locus_tag=AL42_RS17080;product=DUF202 domain-containing protein;protein_id=WP_003411678.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2534659 2534976 . - . ID=gene-AL42_RS17085;Name=AL42_RS17085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17085;old_locus_tag=AL42_02351 NZ_KK316784.1 Protein Homology CDS 2534659 2534976 . - 0 ID=cds-WP_003902157.1;Parent=gene-AL42_RS17085;Dbxref=GenBank:WP_003902157.1;Name=WP_003902157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216790.1;locus_tag=AL42_RS17085;product=hypothetical protein;protein_id=WP_003902157.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2535010 2535258 . - . ID=gene-AL42_RS27670;Name=mazE8;gbkey=Gene;gene=mazE8;gene_biotype=protein_coding;locus_tag=AL42_RS27670;old_locus_tag=AL42_02352 NZ_KK316784.1 Protein Homology CDS 2535010 2535258 . - 0 ID=cds-WP_003903832.1;Parent=gene-AL42_RS27670;Dbxref=GenBank:WP_003903832.1;Name=WP_003903832.1;gbkey=CDS;gene=mazE8;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007410963.1;locus_tag=AL42_RS27670;product=type II toxin-antitoxin system antitoxin MazE8;protein_id=WP_003903832.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2535279 2535923 . + . ID=gene-AL42_RS17090;Name=AL42_RS17090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17090;old_locus_tag=AL42_02353 NZ_KK316784.1 Protein Homology CDS 2535279 2535923 . + 0 ID=cds-WP_229303148.1;Parent=gene-AL42_RS17090;Dbxref=GenBank:WP_229303148.1;Name=WP_229303148.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04539.1;locus_tag=AL42_RS17090;product=cyclodityrosine synthase;protein_id=WP_229303148.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2535920 2537110 . + . ID=gene-AL42_RS17095;Name=cyp121;gbkey=Gene;gene=cyp121;gene_biotype=protein_coding;locus_tag=AL42_RS17095;old_locus_tag=AL42_02354 NZ_KK316784.1 Protein Homology CDS 2535920 2537110 . + 0 ID=cds-WP_003901366.1;Parent=gene-AL42_RS17095;Dbxref=GenBank:WP_003901366.1;Name=WP_003901366.1;gbkey=CDS;gene=cyp121;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216792.1;locus_tag=AL42_RS17095;product=mycocyclosin synthase Cyp121;protein_id=WP_003901366.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2537295 2538194 . - . ID=gene-AL42_RS17100;Name=AL42_RS17100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17100;old_locus_tag=AL42_02355 NZ_KK316784.1 Protein Homology CDS 2537295 2538194 . - 0 ID=cds-WP_003411688.1;Parent=gene-AL42_RS17100;Dbxref=GenBank:WP_003411688.1;Name=WP_003411688.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003411688.1;locus_tag=AL42_RS17100;product=glycerophosphodiester phosphodiesterase family protein;protein_id=WP_003411688.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2538373 2539752 . + . ID=gene-AL42_RS17105;Name=AL42_RS17105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17105;old_locus_tag=AL42_02356 NZ_KK316784.1 Protein Homology CDS 2538373 2539752 . + 0 ID=cds-WP_003905801.1;Parent=gene-AL42_RS17105;Dbxref=GenBank:WP_003905801.1;Name=WP_003905801.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015293581.1;locus_tag=AL42_RS17105;product=FAD-binding oxidoreductase;protein_id=WP_003905801.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2539986 2541644 . + . ID=gene-AL42_RS17110;Name=pitB;gbkey=Gene;gene=pitB;gene_biotype=protein_coding;locus_tag=AL42_RS17110;old_locus_tag=AL42_02357 NZ_KK316784.1 Protein Homology CDS 2539986 2541644 . + 0 ID=cds-WP_003411694.1;Parent=gene-AL42_RS17110;Dbxref=GenBank:WP_003411694.1;Name=WP_003411694.1;Ontology_term=GO:0006817,GO:0005315,GO:0016020;gbkey=CDS;gene=pitB;go_component=membrane|0016020||IEA;go_function=phosphate transmembrane transporter activity|0005315||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216797.1;locus_tag=AL42_RS17110;product=inorganic phosphate transporter;protein_id=WP_003411694.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2541751 2542689 . - . ID=gene-AL42_RS17115;Name=AL42_RS17115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17115;old_locus_tag=AL42_02358 NZ_KK316784.1 Protein Homology CDS 2541751 2542689 . - 0 ID=cds-WP_003411696.1;Parent=gene-AL42_RS17115;Dbxref=GenBank:WP_003411696.1;Name=WP_003411696.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216798.1;locus_tag=AL42_RS17115;product=LysR family transcriptional regulator;protein_id=WP_003411696.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2542738 2542959 . - . ID=gene-AL42_RS28165;Name=AL42_RS28165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS28165 NZ_KK316784.1 GeneMarkS-2+ CDS 2542738 2542959 . - 0 ID=cds-WP_015385286.1;Parent=gene-AL42_RS28165;Dbxref=GenBank:WP_015385286.1;Name=WP_015385286.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL42_RS28165;product=hypothetical protein;protein_id=WP_015385286.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2542958 2544253 . + . ID=gene-AL42_RS17120;Name=lipM;gbkey=Gene;gene=lipM;gene_biotype=protein_coding;locus_tag=AL42_RS17120;old_locus_tag=AL42_02360 NZ_KK316784.1 Protein Homology CDS 2542958 2544253 . + 0 ID=cds-WP_003899248.1;Parent=gene-AL42_RS17120;Dbxref=GenBank:WP_003899248.1;Name=WP_003899248.1;Ontology_term=GO:0016787;gbkey=CDS;gene=lipM;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216800.1;locus_tag=AL42_RS17120;product=alpha/beta hydrolase;protein_id=WP_003899248.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2544286 2545623 . + . ID=gene-AL42_RS17125;Name=AL42_RS17125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17125;old_locus_tag=AL42_02361 NZ_KK316784.1 Protein Homology CDS 2544286 2545623 . + 0 ID=cds-WP_003411704.1;Parent=gene-AL42_RS17125;Dbxref=GenBank:WP_003411704.1;Name=WP_003411704.1;Ontology_term=GO:0045017,GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;go_process=glycerolipid biosynthetic process|0045017||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216801.1;locus_tag=AL42_RS17125;product=WS/DGAT/MGAT family O-acyltransferase;protein_id=WP_003411704.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2545690 2546382 . - . ID=gene-AL42_RS17130;Name=AL42_RS17130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17130;old_locus_tag=AL42_02362 NZ_KK316784.1 Protein Homology CDS 2545690 2546382 . - 0 ID=cds-WP_003411707.1;Parent=gene-AL42_RS17130;Dbxref=GenBank:WP_003411707.1;Name=WP_003411707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216802.1;locus_tag=AL42_RS17130;product=mycothiol-dependent nitroreductase Rv2466c family protein;protein_id=WP_003411707.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2546552 2548144 . + . ID=gene-AL42_RS17135;Name=yjcE;gbkey=Gene;gene=yjcE;gene_biotype=protein_coding;locus_tag=AL42_RS17135;old_locus_tag=AL42_02363 NZ_KK316784.1 Protein Homology CDS 2546552 2548144 . + 0 ID=cds-WP_003916985.1;Parent=gene-AL42_RS17135;Dbxref=GenBank:WP_003916985.1;Name=WP_003916985.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385,GO:0016020;gbkey=CDS;gene=yjcE;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003916985.1;locus_tag=AL42_RS17135;product=Na+/H+ antiporter;protein_id=WP_003916985.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2548141 2548518 . + . ID=gene-AL42_RS17140;Name=AL42_RS17140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17140;old_locus_tag=AL42_02364 NZ_KK316784.1 Protein Homology CDS 2548141 2548518 . + 0 ID=cds-WP_003900492.1;Parent=gene-AL42_RS17140;Dbxref=GenBank:WP_003900492.1;Name=WP_003900492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216804.1;locus_tag=AL42_RS17140;product=hypothetical protein;protein_id=WP_003900492.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2548488 2549270 . + . ID=gene-AL42_RS17145;Name=cdh;gbkey=Gene;gene=cdh;gene_biotype=protein_coding;locus_tag=AL42_RS17145;old_locus_tag=AL42_02365 NZ_KK316784.1 Protein Homology CDS 2548488 2549270 . + 0 ID=cds-WP_003411717.1;Parent=gene-AL42_RS17145;Dbxref=GenBank:WP_003411717.1;Name=WP_003411717.1;gbkey=CDS;gene=cdh;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216805.1;locus_tag=AL42_RS17145;product=CDP-diacylglycerol diphosphatase;protein_id=WP_003411717.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2549412 2549927 . + . ID=gene-AL42_RS17150;Name=lppO;gbkey=Gene;gene=lppO;gene_biotype=protein_coding;locus_tag=AL42_RS17150;old_locus_tag=AL42_02366 NZ_KK316784.1 Protein Homology CDS 2549412 2549927 . + 0 ID=cds-WP_003901367.1;Parent=gene-AL42_RS17150;Dbxref=GenBank:WP_003901367.1;Name=WP_003901367.1;Ontology_term=GO:0016020;gbkey=CDS;gene=lppO;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216806.1;locus_tag=AL42_RS17150;product=lipoprotein LpqH;protein_id=WP_003901367.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2549987 2550841 . + . ID=gene-AL42_RS17155;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=AL42_RS17155;old_locus_tag=AL42_02367 NZ_KK316784.1 Protein Homology CDS 2549987 2550841 . + 0 ID=cds-WP_003899253.1;Parent=gene-AL42_RS17155;Dbxref=GenBank:WP_003899253.1;Name=WP_003899253.1;Ontology_term=GO:0000098,GO:0016783;gbkey=CDS;gene=sseB;go_function=sulfurtransferase activity|0016783||IEA;go_process=sulfur amino acid catabolic process|0000098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216807.1;locus_tag=AL42_RS17155;product=sulfurtransferase;protein_id=WP_003899253.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2550842 2551816 . - . ID=gene-AL42_RS0105105;Name=AL42_RS0105105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0105105;old_locus_tag=AL42_02369 NZ_KK316784.1 Protein Homology CDS 2550842 2551816 . - 0 ID=cds-WP_003901369.1;Parent=gene-AL42_RS0105105;Dbxref=GenBank:WP_003901369.1;Name=WP_003901369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003901369.1;locus_tag=AL42_RS0105105;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase family protein;protein_id=WP_003901369.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2552141 2553364 . + . ID=gene-AL42_RS17165;Name=AL42_RS17165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17165;old_locus_tag=AL42_02370 NZ_KK316784.1 Protein Homology CDS 2552141 2553364 . + 0 ID=cds-WP_003899255.1;Parent=gene-AL42_RS17165;Dbxref=GenBank:WP_003899255.1;Name=WP_003899255.1;Ontology_term=GO:0009086,GO:0030170,GO:0047804;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216810.1;locus_tag=AL42_RS17165;product=MalY/PatB family protein;protein_id=WP_003899255.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2553587 2554225 . + . ID=gene-AL42_RS17170;Name=AL42_RS17170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17170;old_locus_tag=AL42_02371 NZ_KK316784.1 Protein Homology CDS 2553587 2554225 . + 0 ID=cds-WP_003899256.1;Parent=gene-AL42_RS17170;Dbxref=GenBank:WP_003899256.1;Name=WP_003899256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216811.1;locus_tag=AL42_RS17170;product=CbrC family protein;protein_id=WP_003899256.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2554319 2555221 . + . ID=gene-AL42_RS17175;Name=AL42_RS17175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17175;old_locus_tag=AL42_02372 NZ_KK316784.1 Protein Homology CDS 2554319 2555221 . + 0 ID=cds-WP_003411849.1;Parent=gene-AL42_RS17175;Dbxref=GenBank:WP_003411849.1;Name=WP_003411849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216812.1;locus_tag=AL42_RS17175;product=haloalkane dehalogenase;protein_id=WP_003411849.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2555253 2555705 . + . ID=gene-AL42_RS17180;Name=AL42_RS17180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17180;old_locus_tag=AL42_02373 NZ_KK316784.1 Protein Homology CDS 2555253 2555705 . + 0 ID=cds-WP_003411851.1;Parent=gene-AL42_RS17180;Dbxref=GenBank:WP_003411851.1;Name=WP_003411851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216813.1;locus_tag=AL42_RS17180;product=hypothetical protein;protein_id=WP_003411851.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2555897 2556868 . + . ID=gene-AL42_RS17185;Name=AL42_RS17185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17185;old_locus_tag=AL42_02374 NZ_KK316784.1 Protein Homology CDS 2555897 2556868 . + 0 ID=cds-WP_003902161.1;Parent=gene-AL42_RS17185;Dbxref=GenBank:WP_003902161.1;Name=WP_003902161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216814.1;locus_tag=AL42_RS17185;product=aldo/keto reductase;protein_id=WP_003902161.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2556874 2558817 . - . ID=gene-AL42_RS17190;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=AL42_RS17190;old_locus_tag=AL42_02375 NZ_KK316784.1 Protein Homology CDS 2556874 2558817 . - 0 ID=cds-WP_003411855.1;Parent=gene-AL42_RS17190;Dbxref=GenBank:WP_003411855.1;Name=WP_003411855.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216815.1;locus_tag=AL42_RS17190;product=molecular chaperone HtpG;protein_id=WP_003411855.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2558891 2559673 . - . ID=gene-AL42_RS17195;Name=AL42_RS17195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17195;old_locus_tag=AL42_02376 NZ_KK316784.1 Protein Homology CDS 2558891 2559673 . - 0 ID=cds-WP_003911838.1;Parent=gene-AL42_RS17195;Dbxref=GenBank:WP_003911838.1;Name=WP_003911838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911838.1;locus_tag=AL42_RS17195;product=MBL fold metallo-hydrolase;protein_id=WP_003911838.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2559830 2560522 . + . ID=gene-AL42_RS17200;Name=AL42_RS17200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17200;old_locus_tag=AL42_02377 NZ_KK316784.1 Protein Homology CDS 2559830 2560522 . + 0 ID=cds-WP_003411863.1;Parent=gene-AL42_RS17200;Dbxref=GenBank:WP_003411863.1;Name=WP_003411863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216817.2;locus_tag=AL42_RS17200;product=cutinase family protein;protein_id=WP_003411863.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2560628 2560870 . + . ID=gene-AL42_RS17205;Name=AL42_RS17205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17205;old_locus_tag=AL42_02378 NZ_KK316784.1 Protein Homology CDS 2560628 2560870 . + 0 ID=cds-WP_003411866.1;Parent=gene-AL42_RS17205;Dbxref=GenBank:WP_003411866.1;Name=WP_003411866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216818.1;locus_tag=AL42_RS17205;product=DUF1918 domain-containing protein;protein_id=WP_003411866.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2560911 2561834 . - . ID=gene-AL42_RS17210;Name=AL42_RS17210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17210;old_locus_tag=AL42_02379 NZ_KK316784.1 Protein Homology CDS 2560911 2561834 . - 0 ID=cds-WP_003411868.1;Parent=gene-AL42_RS17210;Dbxref=GenBank:WP_003411868.1;Name=WP_003411868.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216819.1;locus_tag=AL42_RS17210;product=amidohydrolase family protein;protein_id=WP_003411868.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2561831 2562040 . - . ID=gene-AL42_RS17215;Name=AL42_RS17215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17215;old_locus_tag=AL42_02380 NZ_KK316784.1 Protein Homology CDS 2561831 2562040 . - 0 ID=cds-WP_003411870.1;Parent=gene-AL42_RS17215;Dbxref=GenBank:WP_003411870.1;Name=WP_003411870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216820.1;locus_tag=AL42_RS17215;product=hypothetical protein;protein_id=WP_003411870.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2562624 2563913 . + . ID=gene-AL42_RS17220;Name=AL42_RS17220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17220;old_locus_tag=AL42_02381 NZ_KK316784.1 Protein Homology CDS 2562624 2563913 . + 0 ID=cds-WP_003899261.1;Parent=gene-AL42_RS17220;Dbxref=GenBank:WP_003899261.1;Name=WP_003899261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216821.1;locus_tag=AL42_RS17220;product=hypothetical protein;protein_id=WP_003899261.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2563923 2564578 . + . ID=gene-AL42_RS27400;Name=AL42_RS27400;end_range=2564578,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS27400;old_locus_tag=AL42_02382;partial=true;pseudo=true NZ_KK316784.1 Protein Homology CDS 2563923 2564578 . + 0 ID=cds-AL42_RS27400;Parent=gene-AL42_RS27400;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016020;end_range=2564578,.;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015305669.1;locus_tag=AL42_RS27400;partial=true;product=TVP38/TMEM64 family protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 2564666 2565511 . - . ID=gene-AL42_RS17230;Name=AL42_RS17230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17230;old_locus_tag=AL42_02384 NZ_KK316784.1 Protein Homology CDS 2564666 2565511 . - 0 ID=cds-WP_003902165.1;Parent=gene-AL42_RS17230;Dbxref=GenBank:WP_003902165.1;Name=WP_003902165.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216823.1;locus_tag=AL42_RS17230;product=alpha/beta hydrolase;protein_id=WP_003902165.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2565668 2566012 . - . ID=gene-AL42_RS26100;Name=AL42_RS26100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS26100 NZ_KK316784.1 Protein Homology CDS 2565668 2566012 . - 0 ID=cds-WP_071854221.1;Parent=gene-AL42_RS26100;Dbxref=GenBank:WP_071854221.1;Name=WP_071854221.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024001.6;locus_tag=AL42_RS26100;product=DUF3761 domain-containing protein;protein_id=WP_071854221.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2566043 2566234 . - . ID=gene-AL42_RS17235;Name=AL42_RS17235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17235;old_locus_tag=AL42_02385 NZ_KK316784.1 Protein Homology CDS 2566043 2566234 . - 0 ID=cds-WP_003899264.1;Parent=gene-AL42_RS17235;Dbxref=GenBank:WP_003899264.1;Name=WP_003899264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177665.1;locus_tag=AL42_RS17235;product=hypothetical protein;protein_id=WP_003899264.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2566319 2566750 . - . ID=gene-AL42_RS17240;Name=AL42_RS17240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17240;old_locus_tag=AL42_02386 NZ_KK316784.1 Protein Homology CDS 2566319 2566750 . - 0 ID=cds-WP_003899265.1;Parent=gene-AL42_RS17240;Dbxref=GenBank:WP_003899265.1;Name=WP_003899265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177666.1;locus_tag=AL42_RS17240;product=hypothetical protein;protein_id=WP_003899265.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2566843 2567025 . - . ID=gene-AL42_RS17245;Name=AL42_RS17245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17245;old_locus_tag=AL42_02387 NZ_KK316784.1 Protein Homology CDS 2566843 2567025 . - 0 ID=cds-WP_003902166.1;Parent=gene-AL42_RS17245;Dbxref=GenBank:WP_003902166.1;Name=WP_003902166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177667.1;locus_tag=AL42_RS17245;product=hypothetical protein;protein_id=WP_003902166.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2567234 2567950 . + . ID=gene-AL42_RS17250;Name=AL42_RS17250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17250;old_locus_tag=AL42_02388 NZ_KK316784.1 Protein Homology CDS 2567234 2567950 . + 0 ID=cds-WP_003902167.1;Parent=gene-AL42_RS17250;Dbxref=GenBank:WP_003902167.1;Name=WP_003902167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216824.1;locus_tag=AL42_RS17250;product=DUF433 domain-containing protein;protein_id=WP_003902167.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2567960 2568292 . + . ID=gene-AL42_RS0105110;Name=AL42_RS0105110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0105110 NZ_KK316784.1 Protein Homology CDS 2567960 2568292 . + 0 ID=cds-WP_003411888.1;Parent=gene-AL42_RS0105110;Dbxref=GenBank:WP_003411888.1;Name=WP_003411888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030038.1;locus_tag=AL42_RS0105110;product=hypothetical protein;protein_id=WP_003411888.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2568579 2568652 . - . ID=gene-AL42_RS17255;Name=AL42_RS17255;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL42_RS17255;old_locus_tag=AL42_02389 NZ_KK316784.1 tRNAscan-SE tRNA 2568579 2568652 . - . ID=rna-AL42_RS17255;Parent=gene-AL42_RS17255;anticodon=(pos:complement(2568616..2568618));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS17255;product=tRNA-Ile NZ_KK316784.1 tRNAscan-SE exon 2568579 2568652 . - . ID=exon-AL42_RS17255-1;Parent=rna-AL42_RS17255;anticodon=(pos:complement(2568616..2568618));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS17255;product=tRNA-Ile NZ_KK316784.1 RefSeq gene 2568658 2569113 . - . ID=gene-AL42_RS17260;Name=AL42_RS17260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17260;old_locus_tag=AL42_02390 NZ_KK316784.1 Protein Homology CDS 2568658 2569113 . - 0 ID=cds-WP_003899267.1;Parent=gene-AL42_RS17260;Dbxref=GenBank:WP_003899267.1;Name=WP_003899267.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003901373.1;locus_tag=AL42_RS17260;product=site-specific integrase;protein_id=WP_003899267.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2569130 2569255 . - . ID=gene-AL42_RS27405;Name=AL42_RS27405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27405 NZ_KK316784.1 Protein Homology CDS 2569130 2569255 . - 0 ID=cds-WP_003909645.1;Parent=gene-AL42_RS27405;Dbxref=GenBank:WP_003909645.1;Name=WP_003909645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003909645.1;locus_tag=AL42_RS27405;product=hypothetical protein;protein_id=WP_003909645.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2569292 2569459 . - . ID=gene-AL42_RS27240;Name=AL42_RS27240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27240;old_locus_tag=AL42_02391 NZ_KK316784.1 Protein Homology CDS 2569292 2569459 . - 0 ID=cds-WP_003907913.1;Parent=gene-AL42_RS27240;Dbxref=GenBank:WP_003907913.1;Name=WP_003907913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003907913.1;locus_tag=AL42_RS27240;product=hypothetical protein;protein_id=WP_003907913.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2569860 2570147 . + . ID=gene-AL42_RS17265;Name=AL42_RS17265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17265;old_locus_tag=AL42_02392 NZ_KK316784.1 Protein Homology CDS 2569860 2570147 . + 0 ID=cds-WP_003902168.1;Parent=gene-AL42_RS17265;Dbxref=GenBank:WP_003902168.1;Name=WP_003902168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177668.1;locus_tag=AL42_RS17265;product=hypothetical protein;protein_id=WP_003902168.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2570253 2570594 . + . ID=gene-AL42_RS17270;Name=AL42_RS17270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17270;old_locus_tag=AL42_02393 NZ_KK316784.1 Protein Homology CDS 2570253 2570594 . + 0 ID=cds-WP_003901374.1;Parent=gene-AL42_RS17270;Dbxref=GenBank:WP_003901374.1;Name=WP_003901374.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003901374.1;locus_tag=AL42_RS17270;product=helix-turn-helix domain-containing protein;protein_id=WP_003901374.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2570627 2571223 . + . ID=gene-AL42_RS17275;Name=AL42_RS17275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17275;old_locus_tag=AL42_02394 NZ_KK316784.1 Protein Homology CDS 2570627 2571223 . + 0 ID=cds-WP_003899268.1;Parent=gene-AL42_RS17275;Dbxref=GenBank:WP_003899268.1;Name=WP_003899268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014585278.1;locus_tag=AL42_RS17275;product=hypothetical protein;protein_id=WP_003899268.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2571301 2571570 . + . ID=gene-AL42_RS17280;Name=AL42_RS17280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17280;old_locus_tag=AL42_02395 NZ_KK316784.1 Protein Homology CDS 2571301 2571570 . + 0 ID=cds-WP_003411919.1;Parent=gene-AL42_RS17280;Dbxref=GenBank:WP_003411919.1;Name=WP_003411919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216828.1;locus_tag=AL42_RS17280;product=hypothetical protein;protein_id=WP_003411919.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2571867 2572721 . - . ID=gene-AL42_RS17285;Name=AL42_RS17285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17285;old_locus_tag=AL42_02396 NZ_KK316784.1 Protein Homology CDS 2571867 2572721 . - 0 ID=cds-WP_003411924.1;Parent=gene-AL42_RS17285;Dbxref=GenBank:WP_003411924.1;Name=WP_003411924.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216829.1;locus_tag=AL42_RS17285;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_003411924.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2572732 2574105 . - . ID=gene-AL42_RS17290;Name=AL42_RS17290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17290;old_locus_tag=AL42_02397 NZ_KK316784.1 Protein Homology CDS 2572732 2574105 . - 0 ID=cds-WP_003899270.1;Parent=gene-AL42_RS17290;Dbxref=GenBank:WP_003899270.1;Name=WP_003899270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216830.1;locus_tag=AL42_RS17290;product=TldD/PmbA family protein;protein_id=WP_003899270.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2574102 2575619 . - . ID=gene-AL42_RS17295;Name=AL42_RS17295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17295;old_locus_tag=AL42_02398 NZ_KK316784.1 Protein Homology CDS 2574102 2575619 . - 0 ID=cds-WP_003411929.1;Parent=gene-AL42_RS17295;Dbxref=GenBank:WP_003411929.1;Name=WP_003411929.1;Ontology_term=GO:0006508,GO:0008237,GO:0008270;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216831.1;locus_tag=AL42_RS17295;product=TldD/PmbA family protein;protein_id=WP_003411929.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2575653 2576525 . + . ID=gene-AL42_RS17300;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=AL42_RS17300;old_locus_tag=AL42_02399 NZ_KK316784.1 Protein Homology CDS 2575653 2576525 . + 0 ID=cds-WP_003905805.1;Parent=gene-AL42_RS17300;Dbxref=GenBank:WP_003905805.1;Name=WP_003905805.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;gene=uspA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216832.1;locus_tag=AL42_RS17300;product=carbohydrate ABC transporter permease;protein_id=WP_003905805.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2576512 2577336 . + . ID=gene-AL42_RS17305;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=AL42_RS17305;old_locus_tag=AL42_02400 NZ_KK316784.1 Protein Homology CDS 2576512 2577336 . + 0 ID=cds-WP_003411946.1;Parent=gene-AL42_RS17305;Dbxref=GenBank:WP_003411946.1;Name=WP_003411946.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;gene=uspB;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177866.1;locus_tag=AL42_RS17305;product=carbohydrate ABC transporter permease;protein_id=WP_003411946.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2577333 2578655 . + . ID=gene-AL42_RS17310;Name=uspC;gbkey=Gene;gene=uspC;gene_biotype=protein_coding;locus_tag=AL42_RS17310;old_locus_tag=AL42_02401 NZ_KK316784.1 Protein Homology CDS 2577333 2578655 . + 0 ID=cds-WP_003411947.1;Parent=gene-AL42_RS17310;Dbxref=GenBank:WP_003411947.1;Name=WP_003411947.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;gene=uspC;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216834.1;locus_tag=AL42_RS17310;product=ABC transporter substrate-binding protein;protein_id=WP_003411947.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2578663 2579541 . - . ID=gene-AL42_RS17315;Name=AL42_RS17315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17315;old_locus_tag=AL42_02402 NZ_KK316784.1 Protein Homology CDS 2578663 2579541 . - 0 ID=cds-WP_003411952.1;Parent=gene-AL42_RS17315;Dbxref=GenBank:WP_003411952.1;Name=WP_003411952.1;Ontology_term=GO:0050896,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=response to stimulus|0050896||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216835.1;locus_tag=AL42_RS17315;product=universal stress protein;protein_id=WP_003411952.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2579538 2580968 . - . ID=gene-AL42_RS17320;Name=rocE;gbkey=Gene;gene=rocE;gene_biotype=protein_coding;locus_tag=AL42_RS17320;old_locus_tag=AL42_02403 NZ_KK316784.1 Protein Homology CDS 2579538 2580968 . - 0 ID=cds-WP_003411955.1;Parent=gene-AL42_RS17320;Dbxref=GenBank:WP_003411955.1;Name=WP_003411955.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=rocE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216836.1;locus_tag=AL42_RS17320;product=amino acid permease;protein_id=WP_003411955.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2580969 2582179 . - . ID=gene-AL42_RS27995;Name=AL42_RS27995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS27995;pseudo=true NZ_KK316784.1 Protein Homology CDS 2580969 2582179 . - 0 ID=cds-AL42_RS27995;Parent=gene-AL42_RS27995;Note=frameshifted;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: protein motif:HMM:NF012428.6;locus_tag=AL42_RS27995;product=aminotransferase class III-fold pyridoxal phosphate-dependent enzyme;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 2582176 2583024 . - . ID=gene-AL42_RS17335;Name=ddaH;gbkey=Gene;gene=ddaH;gene_biotype=protein_coding;locus_tag=AL42_RS17335;old_locus_tag=AL42_02406 NZ_KK316784.1 Protein Homology CDS 2582176 2583024 . - 0 ID=cds-WP_003914884.1;Parent=gene-AL42_RS17335;Dbxref=GenBank:WP_003914884.1;Name=WP_003914884.1;Ontology_term=GO:0016403;gbkey=CDS;gene=ddaH;go_function=dimethylargininase activity|0016403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003872468.1;locus_tag=AL42_RS17335;product=dimethylargininase;protein_id=WP_003914884.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2583149 2583595 . + . ID=gene-AL42_RS17340;Name=AL42_RS17340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17340;old_locus_tag=AL42_02407 NZ_KK316784.1 Protein Homology CDS 2583149 2583595 . + 0 ID=cds-WP_003411963.1;Parent=gene-AL42_RS17340;Dbxref=GenBank:WP_003411963.1;Name=WP_003411963.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216840.1;locus_tag=AL42_RS17340;product=Rv2324 family transcriptional regulator;protein_id=WP_003411963.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2583824 2584672 . - . ID=gene-AL42_RS17345;Name=AL42_RS17345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17345;old_locus_tag=AL42_02408 NZ_KK316784.1 Protein Homology CDS 2583824 2584672 . - 0 ID=cds-WP_003411966.1;Parent=gene-AL42_RS17345;Dbxref=GenBank:WP_003411966.1;Name=WP_003411966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216841.1;locus_tag=AL42_RS17345;product=energy-coupling factor transporter transmembrane component T family protein;protein_id=WP_003411966.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2584669 2586717 . - . ID=gene-AL42_RS17350;Name=AL42_RS17350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17350;old_locus_tag=AL42_02409 NZ_KK316784.1 Protein Homology CDS 2584669 2586717 . - 0 ID=cds-WP_369810405.1;Parent=gene-AL42_RS17350;Dbxref=GenBank:WP_369810405.1;Name=WP_369810405.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014816547.1;locus_tag=AL42_RS17350;product=ABC transporter ATP-binding protein;protein_id=WP_369810405.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2586803 2587294 . + . ID=gene-AL42_RS17355;Name=AL42_RS17355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17355;old_locus_tag=AL42_02410 NZ_KK316784.1 Protein Homology CDS 2586803 2587294 . + 0 ID=cds-WP_003411970.1;Parent=gene-AL42_RS17355;Dbxref=GenBank:WP_003411970.1;Name=WP_003411970.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216843.1;locus_tag=AL42_RS17355;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_003411970.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2587329 2587517 . + . ID=gene-AL42_RS28000;Name=AL42_RS28000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS28000 NZ_KK316784.1 Protein Homology CDS 2587329 2587517 . + 0 ID=cds-WP_003411971.1;Parent=gene-AL42_RS28000;Dbxref=GenBank:WP_003411971.1;Name=WP_003411971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003411971.1;locus_tag=AL42_RS28000;product=hypothetical protein;protein_id=WP_003411971.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2587546 2588694 . + . ID=gene-AL42_RS17360;Name=AL42_RS17360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17360;old_locus_tag=AL42_02411 NZ_KK316784.1 Protein Homology CDS 2587546 2588694 . + 0 ID=cds-WP_003902169.1;Parent=gene-AL42_RS17360;Dbxref=GenBank:WP_003902169.1;Name=WP_003902169.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177867.1;locus_tag=AL42_RS17360;product=PE family protein;protein_id=WP_003902169.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2588729 2590276 . - . ID=gene-AL42_RS17365;Name=AL42_RS17365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17365;old_locus_tag=AL42_02412 NZ_KK316784.1 Protein Homology CDS 2588729 2590276 . - 0 ID=cds-WP_003411973.1;Parent=gene-AL42_RS17365;Dbxref=GenBank:WP_003411973.1;Name=WP_003411973.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216845.1;locus_tag=AL42_RS17365;product=nitrate/nitrite transporter;protein_id=WP_003411973.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2590510 2591037 . - . ID=gene-AL42_RS17370;Name=lppP;gbkey=Gene;gene=lppP;gene_biotype=protein_coding;locus_tag=AL42_RS17370;old_locus_tag=AL42_02413 NZ_KK316784.1 Protein Homology CDS 2590510 2591037 . - 0 ID=cds-WP_003411974.1;Parent=gene-AL42_RS17370;Dbxref=GenBank:WP_003411974.1;Name=WP_003411974.1;gbkey=CDS;gene=lppP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216846.1;locus_tag=AL42_RS17370;product=LppP/LprE family lipoprotein;protein_id=WP_003411974.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2591112 2591498 . + . ID=gene-AL42_RS17375;Name=AL42_RS17375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17375;old_locus_tag=AL42_02414 NZ_KK316784.1 Protein Homology CDS 2591112 2591498 . + 0 ID=cds-WP_003411975.1;Parent=gene-AL42_RS17375;Dbxref=GenBank:WP_003411975.1;Name=WP_003411975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216847.1;locus_tag=AL42_RS17375;product=hypothetical protein;protein_id=WP_003411975.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2591765 2591893 . + . ID=gene-AL42_RS27860;Name=AL42_RS27860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27860 NZ_KK316784.1 GeneMarkS-2+ CDS 2591765 2591893 . + 0 ID=cds-WP_003916988.1;Parent=gene-AL42_RS27860;Dbxref=GenBank:WP_003916988.1;Name=WP_003916988.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL42_RS27860;product=hypothetical protein;protein_id=WP_003916988.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2591923 2593569 . + . ID=gene-AL42_RS17385;Name=mez;gbkey=Gene;gene=mez;gene_biotype=protein_coding;locus_tag=AL42_RS17385;old_locus_tag=AL42_02416 NZ_KK316784.1 Protein Homology CDS 2591923 2593569 . + 0 ID=cds-WP_003899273.1;Parent=gene-AL42_RS17385;Dbxref=GenBank:WP_003899273.1;Name=WP_003899273.1;Ontology_term=GO:0004470,GO:0004471,GO:0046872,GO:0051287;gbkey=CDS;gene=mez;go_function=malic enzyme activity|0004470||IEA,malate dehydrogenase (decarboxylating) (NAD+) activity|0004471||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216848.2;locus_tag=AL42_RS17385;product=NAD-dependent malic enzyme;protein_id=WP_003899273.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2593523 2595136 . - . ID=gene-AL42_RS17390;Name=stp;gbkey=Gene;gene=stp;gene_biotype=protein_coding;locus_tag=AL42_RS17390;old_locus_tag=AL42_02417 NZ_KK316784.1 Protein Homology CDS 2593523 2595136 . - 0 ID=cds-WP_003899274.1;Parent=gene-AL42_RS17390;Dbxref=GenBank:WP_003899274.1;Name=WP_003899274.1;gbkey=CDS;gene=stp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216849.1;locus_tag=AL42_RS17390;product=multidrug resistance protein Stp;protein_id=WP_003899274.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2595341 2595409 . + . ID=gene-AL42_RS28005;Name=AL42_RS28005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS28005 NZ_KK316784.1 Protein Homology CDS 2595341 2595409 . + 0 ID=cds-WP_306921051.1;Parent=gene-AL42_RS28005;Dbxref=GenBank:WP_306921051.1;Name=WP_306921051.1;Note=Zero WPs at creation%2C it seemed. Model will need a rebuild once some become available. Manually created WP_306921051.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042939.1;locus_tag=AL42_RS28005;product=Rv2334A family Cys-rich leader peptide;protein_id=WP_306921051.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2595611 2596543 . + . ID=gene-AL42_RS17395;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=AL42_RS17395;old_locus_tag=AL42_02418 NZ_KK316784.1 Protein Homology CDS 2595611 2596543 . + 0 ID=cds-WP_003899275.1;Parent=gene-AL42_RS17395;Dbxref=GenBank:WP_003899275.1;Name=WP_003899275.1;gbkey=CDS;gene=cysK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177868.1;locus_tag=AL42_RS17395;product=O-acetylserine sulfhydrylase;protein_id=WP_003899275.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2596547 2597236 . + . ID=gene-AL42_RS17400;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=AL42_RS17400;old_locus_tag=AL42_02419 NZ_KK316784.1 Protein Homology CDS 2596547 2597236 . + 0 ID=cds-WP_003411985.1;Parent=gene-AL42_RS17400;Dbxref=GenBank:WP_003411985.1;Name=WP_003411985.1;Ontology_term=GO:0006535,GO:0009001,GO:0005737;gbkey=CDS;gene=cysE;go_component=cytoplasm|0005737||IEA;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216851.1;locus_tag=AL42_RS17400;product=serine O-acetyltransferase;protein_id=WP_003411985.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2597652 2598620 . + . ID=gene-AL42_RS17405;Name=AL42_RS17405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17405;old_locus_tag=AL42_02420 NZ_KK316784.1 Protein Homology CDS 2597652 2598620 . + 0 ID=cds-WP_003411992.1;Parent=gene-AL42_RS17405;Dbxref=GenBank:WP_003411992.1;Name=WP_003411992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216852.1;locus_tag=AL42_RS17405;product=hypothetical protein;protein_id=WP_003411992.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2598684 2599802 . - . ID=gene-AL42_RS17410;Name=AL42_RS17410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17410;old_locus_tag=AL42_02421 NZ_KK316784.1 Protein Homology CDS 2598684 2599802 . - 0 ID=cds-WP_003412001.1;Parent=gene-AL42_RS17410;Dbxref=GenBank:WP_003412001.1;Name=WP_003412001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216853.1;locus_tag=AL42_RS17410;product=nitroreductase family protein;protein_id=WP_003412001.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2599922 2600878 . - . ID=gene-AL42_RS17415;Name=moeW;gbkey=Gene;gene=moeW;gene_biotype=protein_coding;locus_tag=AL42_RS17415;old_locus_tag=AL42_02422 NZ_KK316784.1 Protein Homology CDS 2599922 2600878 . - 0 ID=cds-WP_003412005.1;Parent=gene-AL42_RS17415;Dbxref=GenBank:WP_003412005.1;Name=WP_003412005.1;gbkey=CDS;gene=moeW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216854.1;locus_tag=AL42_RS17415;product=ThiF family adenylyltransferase;protein_id=WP_003412005.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2601508 2604395 . + . ID=gene-AL42_RS17420;Name=mmpL9;gbkey=Gene;gene=mmpL9;gene_biotype=pseudogene;locus_tag=AL42_RS17420;old_locus_tag=AL42_02423;pseudo=true NZ_KK316784.1 Protein Homology CDS 2601508 2604395 . + 0 ID=cds-AL42_RS17420;Parent=gene-AL42_RS17420;Note=frameshifted;gbkey=CDS;gene=mmpL9;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216855.1;locus_tag=AL42_RS17420;product=RND transporter MmpL9;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2604343 2604451 . + . ID=gene-AL42_RS26890;Name=AL42_RS26890;end_range=2604451,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS26890;partial=true;pseudo=true;start_range=.,2604343 NZ_KK316784.1 Protein Homology CDS 2604343 2604451 . + 0 ID=cds-AL42_RS26890;Parent=gene-AL42_RS26890;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2604451,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216851.1;locus_tag=AL42_RS26890;partial=true;product=serine O-acetyltransferase;pseudo=true;start_range=.,2604343;transl_table=11 NZ_KK316784.1 RefSeq gene 2604481 2605722 . - . ID=gene-AL42_RS17425;Name=AL42_RS17425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17425;old_locus_tag=AL42_02424 NZ_KK316784.1 Protein Homology CDS 2604481 2605722 . - 0 ID=cds-WP_003412039.1;Parent=gene-AL42_RS17425;Dbxref=GenBank:WP_003412039.1;Name=WP_003412039.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177869.1;locus_tag=AL42_RS17425;product=PE family protein;protein_id=WP_003412039.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2606221 2606293 . - . ID=gene-AL42_RS17430;Name=AL42_RS17430;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL42_RS17430;old_locus_tag=AL42_02425 NZ_KK316784.1 tRNAscan-SE tRNA 2606221 2606293 . - . ID=rna-AL42_RS17430;Parent=gene-AL42_RS17430;anticodon=(pos:complement(2606258..2606260));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS17430;product=tRNA-Asn NZ_KK316784.1 tRNAscan-SE exon 2606221 2606293 . - . ID=exon-AL42_RS17430-1;Parent=rna-AL42_RS17430;anticodon=(pos:complement(2606258..2606260));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS17430;product=tRNA-Asn NZ_KK316784.1 RefSeq gene 2606411 2606830 . + . ID=gene-AL42_RS17435;Name=AL42_RS17435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17435;old_locus_tag=AL42_02426 NZ_KK316784.1 Protein Homology CDS 2606411 2606830 . + 0 ID=cds-WP_003412042.1;Parent=gene-AL42_RS17435;Dbxref=GenBank:WP_003412042.1;Name=WP_003412042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216857.1;locus_tag=AL42_RS17435;product=hypothetical protein;protein_id=WP_003412042.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2607086 2607343 . + . ID=gene-AL42_RS17440;Name=AL42_RS17440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17440;old_locus_tag=AL42_02427 NZ_KK316784.1 Protein Homology CDS 2607086 2607343 . + 0 ID=cds-WP_003412045.1;Parent=gene-AL42_RS17440;Dbxref=GenBank:WP_003412045.1;Name=WP_003412045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216858.1;locus_tag=AL42_RS17440;product=hypothetical protein;protein_id=WP_003412045.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2607347 2609266 . - . ID=gene-AL42_RS17445;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=AL42_RS17445;old_locus_tag=AL42_02428 NZ_KK316784.1 Protein Homology CDS 2607347 2609266 . - 0 ID=cds-WP_003412049.1;Parent=gene-AL42_RS17445;Dbxref=GenBank:WP_003412049.1;Name=WP_003412049.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216859.1;locus_tag=AL42_RS17445;product=DNA primase;protein_id=WP_003412049.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2609271 2610566 . - . ID=gene-AL42_RS17450;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=AL42_RS17450;old_locus_tag=AL42_02429 NZ_KK316784.1 Protein Homology CDS 2609271 2610566 . - 0 ID=cds-WP_003899281.1;Parent=gene-AL42_RS17450;Dbxref=GenBank:WP_003899281.1;Name=WP_003899281.1;Ontology_term=GO:0006203,GO:0000287,GO:0008832,GO:0016793;gbkey=CDS;gene=dgt;go_function=magnesium ion binding|0000287||IEA,dGTPase activity|0008832||IEA,triphosphoric monoester hydrolase activity|0016793||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216860.1;locus_tag=AL42_RS17450;product=deoxyguanosinetriphosphate triphosphohydrolase;protein_id=WP_003899281.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2610635 2612617 . + . ID=gene-AL42_RS17455;Name=AL42_RS17455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17455;old_locus_tag=AL42_02430 NZ_KK316784.1 Protein Homology CDS 2610635 2612617 . + 0 ID=cds-WP_003899282.1;Parent=gene-AL42_RS17455;Dbxref=GenBank:WP_003899282.1;Name=WP_003899282.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216861.1;locus_tag=AL42_RS17455;product=TPM domain-containing protein;protein_id=WP_003899282.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2612702 2612986 . - . ID=gene-AL42_RS17460;Name=esxO;gbkey=Gene;gene=esxO;gene_biotype=protein_coding;locus_tag=AL42_RS17460;old_locus_tag=AL42_02431 NZ_KK316784.1 Protein Homology CDS 2612702 2612986 . - 0 ID=cds-WP_003905811.1;Parent=gene-AL42_RS17460;Dbxref=GenBank:WP_003905811.1;Name=WP_003905811.1;gbkey=CDS;gene=esxO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216862.1;locus_tag=AL42_RS17460;product=type VII secretion system effector EsxO;protein_id=WP_003905811.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2613037 2613333 . - . ID=gene-AL42_RS17465;Name=esxJ;gbkey=Gene;gene=esxJ;gene_biotype=protein_coding;locus_tag=AL42_RS17465;old_locus_tag=AL42_02432 NZ_KK316784.1 Protein Homology CDS 2613037 2613333 . - 0 ID=cds-WP_003421604.1-2;Parent=gene-AL42_RS17465;Dbxref=GenBank:WP_003421604.1;Name=WP_003421604.1;gbkey=CDS;gene=esxJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215713.1;locus_tag=AL42_RS17465;product=type VII secretion system ESX-5 protein EsxJ;protein_id=WP_003421604.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2613468 2613794 . - . ID=gene-AL42_RS0105130;Name=AL42_RS0105130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0105130;old_locus_tag=AL42_02433 NZ_KK316784.1 Protein Homology CDS 2613468 2613794 . - 0 ID=cds-WP_003412119.1;Parent=gene-AL42_RS0105130;Dbxref=GenBank:WP_003412119.1;Name=WP_003412119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216864.1;locus_tag=AL42_RS0105130;product=hypothetical protein;protein_id=WP_003412119.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2613986 2615512 . - . ID=gene-AL42_RS17470;Name=plcC;gbkey=Gene;gene=plcC;gene_biotype=protein_coding;locus_tag=AL42_RS17470;old_locus_tag=AL42_02434 NZ_KK316784.1 Protein Homology CDS 2613986 2615512 . - 0 ID=cds-WP_003905812.1;Parent=gene-AL42_RS17470;Dbxref=GenBank:WP_003905812.1;Name=WP_003905812.1;gbkey=CDS;gene=plcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216865.1;locus_tag=AL42_RS17470;product=phospholipase C;protein_id=WP_003905812.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2615595 2617133 . - . ID=gene-AL42_RS17475;Name=plcB;gbkey=Gene;gene=plcB;gene_biotype=protein_coding;locus_tag=AL42_RS17475;old_locus_tag=AL42_02435 NZ_KK316784.1 Protein Homology CDS 2615595 2617133 . - 0 ID=cds-WP_003899285.1;Parent=gene-AL42_RS17475;Dbxref=GenBank:WP_003899285.1;Name=WP_003899285.1;gbkey=CDS;gene=plcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216865.1;locus_tag=AL42_RS17475;product=phospholipase C;protein_id=WP_003899285.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2617351 2618889 . - . ID=gene-AL42_RS17480;Name=plcA;gbkey=Gene;gene=plcA;gene_biotype=protein_coding;locus_tag=AL42_RS17480;old_locus_tag=AL42_02436 NZ_KK316784.1 Protein Homology CDS 2617351 2618889 . - 0 ID=cds-WP_003905813.1;Parent=gene-AL42_RS17480;Dbxref=GenBank:WP_003905813.1;Name=WP_003905813.1;gbkey=CDS;gene=plcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911847.1;locus_tag=AL42_RS17480;product=phospholipase C;protein_id=WP_003905813.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2619470 2619607 . + . ID=gene-AL42_RS27245;Name=AL42_RS27245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27245 NZ_KK316784.1 GeneMarkS-2+ CDS 2619470 2619607 . + 0 ID=cds-WP_021083104.1;Parent=gene-AL42_RS27245;Dbxref=GenBank:WP_021083104.1;Name=WP_021083104.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL42_RS27245;product=hypothetical protein;protein_id=WP_021083104.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2619738 2620907 . - . ID=gene-AL42_RS17485;Name=AL42_RS17485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17485;old_locus_tag=AL42_02437 NZ_KK316784.1 Protein Homology CDS 2619738 2620907 . - 0 ID=cds-WP_049953838.1;Parent=gene-AL42_RS17485;Dbxref=GenBank:WP_049953838.1;Name=WP_049953838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009938502.1;locus_tag=AL42_RS17485;product=PPE family protein;protein_id=WP_049953838.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2620904 2621928 . - . ID=gene-AL42_RS17490;Name=AL42_RS17490;end_range=2621928,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS17490;old_locus_tag=AL42_02438;partial=true;pseudo=true NZ_KK316784.1 Protein Homology CDS 2620904 2621928 . - 0 ID=cds-AL42_RS17490;Parent=gene-AL42_RS17490;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=2621928,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL42_RS17490;partial=true;product=IS3-like element IS6110/IS987 family transposase;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 2622071 2623332 . - . ID=gene-AL42_RS17495;Name=AL42_RS17495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17495;old_locus_tag=AL42_02439 NZ_KK316784.1 Protein Homology CDS 2623044 2623332 . - 0 ID=cds-WP_087902221.1-8;Parent=gene-AL42_RS17495;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL42_RS17495;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316784.1 Protein Homology CDS 2622071 2623044 . - 2 ID=cds-WP_087902221.1-8;Parent=gene-AL42_RS17495;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL42_RS17495;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2623835 2625703 . - . ID=gene-AL42_RS17505;Name=AL42_RS17505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17505;old_locus_tag=AL42_02441 NZ_KK316784.1 Protein Homology CDS 2623835 2625703 . - 0 ID=cds-WP_003907929.1;Parent=gene-AL42_RS17505;Dbxref=GenBank:WP_003907929.1;Name=WP_003907929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015290607.1;locus_tag=AL42_RS17505;product=PPE family protein;protein_id=WP_003907929.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2626441 2628288 . - . ID=gene-AL42_RS17510;Name=AL42_RS17510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17510;old_locus_tag=AL42_02442 NZ_KK316784.1 Protein Homology CDS 2626441 2628288 . - 0 ID=cds-WP_003904827.1;Parent=gene-AL42_RS17510;Dbxref=GenBank:WP_003904827.1;Name=WP_003904827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009939045.1;locus_tag=AL42_RS17510;product=PPE family protein;protein_id=WP_003904827.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2628426 2629817 . - . ID=gene-AL42_RS17515;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=AL42_RS17515;old_locus_tag=AL42_02443 NZ_KK316784.1 Protein Homology CDS 2628426 2629817 . - 0 ID=cds-WP_003412200.1;Parent=gene-AL42_RS17515;Dbxref=GenBank:WP_003412200.1;Name=WP_003412200.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524;gbkey=CDS;gene=glyS;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216873.1;locus_tag=AL42_RS17515;product=glycine--tRNA ligase;protein_id=WP_003412200.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2629999 2630406 . + . ID=gene-AL42_RS17520;Name=smtB;gbkey=Gene;gene=smtB;gene_biotype=protein_coding;locus_tag=AL42_RS17520;old_locus_tag=AL42_02444 NZ_KK316784.1 Protein Homology CDS 2629999 2630406 . + 0 ID=cds-WP_003412205.1;Parent=gene-AL42_RS17520;Dbxref=GenBank:WP_003412205.1;Name=WP_003412205.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=smtB;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216874.1;locus_tag=AL42_RS17520;product=ArsR/SmtB family transcription factor;protein_id=WP_003412205.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2630403 2630795 . + . ID=gene-AL42_RS17525;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=AL42_RS17525;old_locus_tag=AL42_02445 NZ_KK316784.1 Protein Homology CDS 2630403 2630795 . + 0 ID=cds-WP_003899290.1;Parent=gene-AL42_RS17525;Dbxref=GenBank:WP_003899290.1;Name=WP_003899290.1;gbkey=CDS;gene=zur;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216875.1;locus_tag=AL42_RS17525;product=Fur family transcriptional regulator;protein_id=WP_003899290.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2630903 2631331 . - . ID=gene-AL42_RS17530;Name=AL42_RS17530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17530;old_locus_tag=AL42_02446 NZ_KK316784.1 Protein Homology CDS 2630903 2631331 . - 0 ID=cds-WP_003412208.1;Parent=gene-AL42_RS17530;Dbxref=GenBank:WP_003412208.1;Name=WP_003412208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216876.1;locus_tag=AL42_RS17530;product=hypothetical protein;protein_id=WP_003412208.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2631331 2632221 . - . ID=gene-AL42_RS17535;Name=AL42_RS17535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17535;old_locus_tag=AL42_02447 NZ_KK316784.1 Protein Homology CDS 2631331 2632221 . - 0 ID=cds-WP_003412212.1;Parent=gene-AL42_RS17535;Dbxref=GenBank:WP_003412212.1;Name=WP_003412212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216877.1;locus_tag=AL42_RS17535;product=decaprenyl diphosphate synthase;protein_id=WP_003412212.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2632214 2633011 . - . ID=gene-AL42_RS17540;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=AL42_RS17540;old_locus_tag=AL42_02448 NZ_KK316784.1 Protein Homology CDS 2632214 2633011 . - 0 ID=cds-WP_003412222.1;Parent=gene-AL42_RS17540;Dbxref=GenBank:WP_003412222.1;Name=WP_003412222.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216878.1;locus_tag=AL42_RS17540;product=DNA repair protein RecO;protein_id=WP_003412222.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2633073 2634527 . + . ID=gene-AL42_RS17545;Name=AL42_RS17545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17545;old_locus_tag=AL42_02449 NZ_KK316784.1 Protein Homology CDS 2633073 2634527 . + 0 ID=cds-WP_003412223.1;Parent=gene-AL42_RS17545;Dbxref=GenBank:WP_003412223.1;Name=WP_003412223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216879.1;locus_tag=AL42_RS17545;product=amidase;protein_id=WP_003412223.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2634524 2635426 . - . ID=gene-AL42_RS17550;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=AL42_RS17550;old_locus_tag=AL42_02450 NZ_KK316784.1 Protein Homology CDS 2634524 2635426 . - 0 ID=cds-WP_003412224.1;Parent=gene-AL42_RS17550;Dbxref=GenBank:WP_003412224.1;Name=WP_003412224.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177873.1;locus_tag=AL42_RS17550;product=GTPase Era;protein_id=WP_003412224.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2635500 2635841 . - . ID=gene-AL42_RS17555;Name=AL42_RS17555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17555;old_locus_tag=AL42_02451 NZ_KK316784.1 Protein Homology CDS 2635500 2635841 . - 0 ID=cds-WP_003412226.1;Parent=gene-AL42_RS17555;Dbxref=GenBank:WP_003412226.1;Name=WP_003412226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216881.1;locus_tag=AL42_RS17555;product=hypothetical protein;protein_id=WP_003412226.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2635813 2637120 . - . ID=gene-AL42_RS17560;Name=AL42_RS17560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17560;old_locus_tag=AL42_02452 NZ_KK316784.1 Protein Homology CDS 2635813 2637120 . - 0 ID=cds-WP_003905819.1;Parent=gene-AL42_RS17560;Dbxref=GenBank:WP_003905819.1;Name=WP_003905819.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216882.1;locus_tag=AL42_RS17560;product=hemolysin family protein;protein_id=WP_003905819.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2637117 2637650 . - . ID=gene-AL42_RS17565;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=AL42_RS17565;old_locus_tag=AL42_02453 NZ_KK316784.1 Protein Homology CDS 2637117 2637650 . - 0 ID=cds-WP_003899292.1;Parent=gene-AL42_RS17565;Dbxref=GenBank:WP_003899292.1;Name=WP_003899292.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003412232.1;locus_tag=AL42_RS17565;product=rRNA maturation RNase YbeY;protein_id=WP_003899292.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2637669 2638727 . - . ID=gene-AL42_RS17570;Name=AL42_RS17570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17570;old_locus_tag=AL42_02454 NZ_KK316784.1 Protein Homology CDS 2637669 2638727 . - 0 ID=cds-WP_003412235.1;Parent=gene-AL42_RS17570;Dbxref=GenBank:WP_003412235.1;Name=WP_003412235.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177874.1;locus_tag=AL42_RS17570;product=PhoH family protein;protein_id=WP_003412235.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2638699 2639001 . - . ID=gene-AL42_RS26140;Name=AL42_RS26140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS26140;old_locus_tag=AL42_02455 NZ_KK316784.1 Protein Homology CDS 2638699 2639001 . - 0 ID=cds-WP_003902257.1;Parent=gene-AL42_RS26140;Dbxref=GenBank:WP_003902257.1;Name=WP_003902257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216885.1;locus_tag=AL42_RS26140;product=hypothetical protein;protein_id=WP_003902257.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2638998 2640311 . - . ID=gene-AL42_RS17575;Name=AL42_RS17575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17575;old_locus_tag=AL42_02456 NZ_KK316784.1 Protein Homology CDS 2638998 2640311 . - 0 ID=cds-WP_003899293.1;Parent=gene-AL42_RS17575;Dbxref=GenBank:WP_003899293.1;Name=WP_003899293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216886.1;locus_tag=AL42_RS17575;product=Rv1453 family transcriptional regulator;protein_id=WP_003899293.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2640506 2640688 . + . ID=gene-AL42_RS27675;Name=AL42_RS27675;end_range=2640688,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS27675;old_locus_tag=AL42_02457;partial=true;pseudo=true NZ_KK316784.1 Protein Homology CDS 2640506 2640688 . + 0 ID=cds-AL42_RS27675;Parent=gene-AL42_RS27675;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005576,GO:0009986;end_range=2640688,.;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177812.1;locus_tag=AL42_RS27675;partial=true;product=PE family protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 2640790 2641578 . - . ID=gene-AL42_RS17585;Name=AL42_RS17585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17585;old_locus_tag=AL42_02458 NZ_KK316784.1 Protein Homology CDS 2640790 2641578 . - 0 ID=cds-WP_003900509.1;Parent=gene-AL42_RS17585;Dbxref=GenBank:WP_003900509.1;Name=WP_003900509.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216888.1;locus_tag=AL42_RS17585;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_003900509.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2641592 2642740 . - . ID=gene-AL42_RS17590;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=AL42_RS17590;old_locus_tag=AL42_02459 NZ_KK316784.1 Protein Homology CDS 2641592 2642740 . - 0 ID=cds-WP_003899294.1;Parent=gene-AL42_RS17590;Dbxref=GenBank:WP_003899294.1;Name=WP_003899294.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=dnaJ;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216889.1;locus_tag=AL42_RS17590;product=molecular chaperone DnaJ;protein_id=WP_003899294.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2642815 2643846 . - . ID=gene-AL42_RS17595;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=AL42_RS17595;old_locus_tag=AL42_02460 NZ_KK316784.1 Protein Homology CDS 2642815 2643846 . - 0 ID=cds-WP_003412252.1;Parent=gene-AL42_RS17595;Dbxref=GenBank:WP_003412252.1;Name=WP_003412252.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=hrcA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216890.1;locus_tag=AL42_RS17595;product=heat-inducible transcriptional repressor HrcA;protein_id=WP_003412252.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2644018 2644335 . + . ID=gene-AL42_RS17600;Name=AL42_RS17600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17600;old_locus_tag=AL42_02461 NZ_KK316784.1 Protein Homology CDS 2644018 2644335 . + 0 ID=cds-WP_003412258.1;Parent=gene-AL42_RS17600;Dbxref=GenBank:WP_003412258.1;Name=WP_003412258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216891.1;locus_tag=AL42_RS17600;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_003412258.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2644362 2644868 . - . ID=gene-AL42_RS17605;Name=AL42_RS17605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17605;old_locus_tag=AL42_02462 NZ_KK316784.1 Protein Homology CDS 2644362 2644868 . - 0 ID=cds-WP_003412264.1;Parent=gene-AL42_RS17605;Dbxref=GenBank:WP_003412264.1;Name=WP_003412264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216892.1;locus_tag=AL42_RS17605;product=MTB12 family secreted protein;protein_id=WP_003412264.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2644968 2645183 . - . ID=gene-AL42_RS17610;Name=mbtH;gbkey=Gene;gene=mbtH;gene_biotype=protein_coding;locus_tag=AL42_RS17610;old_locus_tag=AL42_02463 NZ_KK316784.1 Protein Homology CDS 2644968 2645183 . - 0 ID=cds-WP_003412265.1;Parent=gene-AL42_RS17610;Dbxref=GenBank:WP_003412265.1;Name=WP_003412265.1;gbkey=CDS;gene=mbtH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216893.1;locus_tag=AL42_RS17610;product=mycobactin NRPS accessory protein MbtH;protein_id=WP_003412265.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2645161 2646456 . - . ID=gene-AL42_RS17615;Name=mbtG;gbkey=Gene;gene=mbtG;gene_biotype=protein_coding;locus_tag=AL42_RS17615;old_locus_tag=AL42_02464 NZ_KK316784.1 Protein Homology CDS 2645161 2646456 . - 0 ID=cds-WP_003899296.1;Parent=gene-AL42_RS17615;Dbxref=GenBank:WP_003899296.1;Name=WP_003899296.1;gbkey=CDS;gene=mbtG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216894.1;locus_tag=AL42_RS17615;product=NADPH-dependent L-lysine N(6)-monooxygenase MbtG;protein_id=WP_003899296.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2646453 2650823 . - . ID=gene-AL42_RS17620;Name=mbtF;gbkey=Gene;gene=mbtF;gene_biotype=protein_coding;locus_tag=AL42_RS17620;old_locus_tag=AL42_02465 NZ_KK316784.1 Protein Homology CDS 2646453 2650823 . - 0 ID=cds-WP_003917623.1;Parent=gene-AL42_RS17620;Dbxref=GenBank:WP_003917623.1;Name=WP_003917623.1;Ontology_term=GO:1904091;gbkey=CDS;gene=mbtF;go_function=non-ribosomal peptide synthetase activity|1904091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917623.1;locus_tag=AL42_RS17620;product=mycobactin non-ribosomal peptide synthetase MbtF;protein_id=WP_003917623.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2650820 2656015 . - . ID=gene-AL42_RS17625;Name=mbtE;gbkey=Gene;gene=mbtE;gene_biotype=protein_coding;locus_tag=AL42_RS17625;old_locus_tag=AL42_02466 NZ_KK316784.1 Protein Homology CDS 2650820 2656015 . - 0 ID=cds-WP_003899297.1;Parent=gene-AL42_RS17625;Dbxref=GenBank:WP_003899297.1;Name=WP_003899297.1;Ontology_term=GO:1904091;gbkey=CDS;gene=mbtE;go_function=non-ribosomal peptide synthetase activity|1904091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899297.1;locus_tag=AL42_RS17625;product=mycobactin non-ribosomal peptide synthetase MbtE;protein_id=WP_003899297.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2656008 2659022 . - . ID=gene-AL42_RS17630;Name=mbtD;gbkey=Gene;gene=mbtD;gene_biotype=protein_coding;locus_tag=AL42_RS17630;old_locus_tag=AL42_02467 NZ_KK316784.1 Protein Homology CDS 2656008 2659022 . - 0 ID=cds-WP_003412277.1;Parent=gene-AL42_RS17630;Dbxref=GenBank:WP_003412277.1;Name=WP_003412277.1;gbkey=CDS;gene=mbtD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216897.1;locus_tag=AL42_RS17630;product=mycobactin polyketide synthase MbtD;protein_id=WP_003412277.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2659022 2660356 . - . ID=gene-AL42_RS17635;Name=mbtC;gbkey=Gene;gene=mbtC;gene_biotype=protein_coding;locus_tag=AL42_RS17635;old_locus_tag=AL42_02468 NZ_KK316784.1 Protein Homology CDS 2659022 2660356 . - 0 ID=cds-WP_003412278.1;Parent=gene-AL42_RS17635;Dbxref=GenBank:WP_003412278.1;Name=WP_003412278.1;gbkey=CDS;gene=mbtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216898.1;locus_tag=AL42_RS17635;product=polyketide synthetase MbtC;protein_id=WP_003412278.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2660346 2664590 . - . ID=gene-AL42_RS17640;Name=mbtB;gbkey=Gene;gene=mbtB;gene_biotype=protein_coding;locus_tag=AL42_RS17640;old_locus_tag=AL42_02469 NZ_KK316784.1 Protein Homology CDS 2660346 2664590 . - 0 ID=cds-WP_003902259.1;Parent=gene-AL42_RS17640;Dbxref=GenBank:WP_003902259.1;Name=WP_003902259.1;gbkey=CDS;gene=mbtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216899.1;locus_tag=AL42_RS17640;product=phenyloxazoline synthase MbtB;protein_id=WP_003902259.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2664689 2666386 . + . ID=gene-AL42_RS17645;Name=mbtA;gbkey=Gene;gene=mbtA;gene_biotype=protein_coding;locus_tag=AL42_RS17645;old_locus_tag=AL42_02470 NZ_KK316784.1 Protein Homology CDS 2664689 2666386 . + 0 ID=cds-WP_003412282.1;Parent=gene-AL42_RS17645;Dbxref=GenBank:WP_003412282.1;Name=WP_003412282.1;gbkey=CDS;gene=mbtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216900.1;locus_tag=AL42_RS17645;product=bifunctional salicyl-AMP ligase/salicyl-S-ArCP synthetase MbtA;protein_id=WP_003412282.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2666419 2667402 . + . ID=gene-AL42_RS17650;Name=mbtJ;gbkey=Gene;gene=mbtJ;gene_biotype=protein_coding;gene_synonym=lipK;locus_tag=AL42_RS17650;old_locus_tag=AL42_02471 NZ_KK316784.1 Protein Homology CDS 2666419 2667402 . + 0 ID=cds-WP_003899300.1;Parent=gene-AL42_RS17650;Dbxref=GenBank:WP_003899300.1;Name=WP_003899300.1;gbkey=CDS;gene=mbtJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899300.1;locus_tag=AL42_RS17650;product=acetyl hydrolase/esterase MbtJ;protein_id=WP_003899300.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2667406 2668758 . - . ID=gene-AL42_RS17655;Name=mbtI;gbkey=Gene;gene=mbtI;gene_biotype=protein_coding;locus_tag=AL42_RS17655;old_locus_tag=AL42_02472 NZ_KK316784.1 Protein Homology CDS 2667406 2668758 . - 0 ID=cds-WP_003412287.1;Parent=gene-AL42_RS17655;Dbxref=GenBank:WP_003412287.1;Name=WP_003412287.1;gbkey=CDS;gene=mbtI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177877.1;locus_tag=AL42_RS17655;product=mycobactin biosynthesis salicylate synthase MbtI;protein_id=WP_003412287.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2669211 2669420 . + . ID=gene-AL42_RS17660;Name=AL42_RS17660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17660;old_locus_tag=AL42_02473 NZ_KK316784.1 Protein Homology CDS 2669211 2669420 . + 0 ID=cds-WP_003899302.1;Parent=gene-AL42_RS17660;Dbxref=GenBank:WP_003899302.1;Name=WP_003899302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030039.1;locus_tag=AL42_RS17660;product=hypothetical protein;protein_id=WP_003899302.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2669518 2670771 . + . ID=gene-AL42_RS17665;Name=AL42_RS17665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17665;old_locus_tag=AL42_02474 NZ_KK316784.1 Protein Homology CDS 2669518 2670771 . + 0 ID=cds-WP_003412289.1;Parent=gene-AL42_RS17665;Dbxref=GenBank:WP_003412289.1;Name=WP_003412289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216903.1;locus_tag=AL42_RS17665;product=sodium-dependent bicarbonate transport family permease;protein_id=WP_003412289.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2670768 2671940 . - . ID=gene-AL42_RS17670;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=AL42_RS17670;old_locus_tag=AL42_02475 NZ_KK316784.1 Protein Homology CDS 2670768 2671940 . - 0 ID=cds-WP_003412290.1;Parent=gene-AL42_RS17670;Dbxref=GenBank:WP_003412290.1;Name=WP_003412290.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631433.1;locus_tag=AL42_RS17670;product=radical SAM family heme chaperone HemW;protein_id=WP_003412290.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2672001 2672465 . - . ID=gene-AL42_RS17675;Name=rpfD;gbkey=Gene;gene=rpfD;gene_biotype=protein_coding;locus_tag=AL42_RS17675;old_locus_tag=AL42_02476 NZ_KK316784.1 Protein Homology CDS 2672001 2672465 . - 0 ID=cds-WP_003412293.1;Parent=gene-AL42_RS17675;Dbxref=GenBank:WP_003412293.1;Name=WP_003412293.1;gbkey=CDS;gene=rpfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216905.1;locus_tag=AL42_RS17675;product=resuscitation-promoting factor protein RpfD;protein_id=WP_003412293.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2672462 2673019 . - . ID=gene-AL42_RS17680;Name=AL42_RS17680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17680;old_locus_tag=AL42_02477 NZ_KK316784.1 Protein Homology CDS 2672462 2673019 . - 0 ID=cds-WP_003412295.1;Parent=gene-AL42_RS17680;Dbxref=GenBank:WP_003412295.1;Name=WP_003412295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216906.1;locus_tag=AL42_RS17680;product=hypothetical protein;protein_id=WP_003412295.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2673285 2673341 . + . ID=gene-AL42_RS28010;Name=AL42_RS28010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS28010 NZ_KK316784.1 Protein Homology CDS 2673285 2673341 . + 0 ID=cds-WP_349814673.1;Parent=gene-AL42_RS28010;Dbxref=GenBank:WP_349814673.1;Name=WP_349814673.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042936.1;locus_tag=AL42_RS28010;product=Ms4527A family Cys-rich leader peptide;protein_id=WP_349814673.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2673456 2675123 . + . ID=gene-AL42_RS17685;Name=sirA;gbkey=Gene;gene=sirA;gene_biotype=protein_coding;locus_tag=AL42_RS17685;old_locus_tag=AL42_02478 NZ_KK316784.1 Protein Homology CDS 2673456 2675123 . + 0 ID=cds-WP_003899303.1;Parent=gene-AL42_RS17685;Dbxref=GenBank:WP_003899303.1;Name=WP_003899303.1;gbkey=CDS;gene=sirA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899303.1;locus_tag=AL42_RS17685;product=sulfite reductase SirA;protein_id=WP_003899303.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2675120 2675884 . + . ID=gene-AL42_RS17690;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;locus_tag=AL42_RS17690;old_locus_tag=AL42_02479 NZ_KK316784.1 Protein Homology CDS 2675120 2675884 . + 0 ID=cds-WP_003412303.1;Parent=gene-AL42_RS17690;Dbxref=GenBank:WP_003412303.1;Name=WP_003412303.1;Ontology_term=GO:0019379,GO:0003824,GO:0004604;gbkey=CDS;gene=cysH;go_function=catalytic activity|0003824||IEA,phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216908.1;locus_tag=AL42_RS17690;product=phosphoadenylyl-sulfate reductase;protein_id=WP_003412303.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2675881 2676726 . + . ID=gene-AL42_RS17695;Name=AL42_RS17695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17695;old_locus_tag=AL42_02480 NZ_KK316784.1 Protein Homology CDS 2675881 2676726 . + 0 ID=cds-WP_003412306.1;Parent=gene-AL42_RS17695;Dbxref=GenBank:WP_003412306.1;Name=WP_003412306.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216909.1;locus_tag=AL42_RS17695;product=sirohydrochlorin chelatase;protein_id=WP_003412306.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2676763 2678694 . + . ID=gene-AL42_RS17700;Name=ggtB;gbkey=Gene;gene=ggtB;gene_biotype=protein_coding;locus_tag=AL42_RS17700;old_locus_tag=AL42_02481 NZ_KK316784.1 Protein Homology CDS 2676763 2678694 . + 0 ID=cds-WP_031721824.1;Parent=gene-AL42_RS17700;Dbxref=GenBank:WP_031721824.1;Name=WP_031721824.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ggtB;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216910.1;locus_tag=AL42_RS17700;product=gamma-glutamyltransferase family protein;protein_id=WP_031721824.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2678825 2680828 . + . ID=gene-AL42_RS17705;Name=AL42_RS17705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17705;old_locus_tag=AL42_02482 NZ_KK316784.1 Protein Homology CDS 2678825 2680828 . + 0 ID=cds-WP_003899305.1;Parent=gene-AL42_RS17705;Dbxref=GenBank:WP_003899305.1;Name=WP_003899305.1;Ontology_term=GO:0006857,GO:0035673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oligopeptide transmembrane transporter activity|0035673||IEA;go_process=oligopeptide transport|0006857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216911.1;locus_tag=AL42_RS17705;product=OPT family oligopeptide transporter;protein_id=WP_003899305.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2680977 2681192 . + . ID=gene-AL42_RS17710;Name=aprA;gbkey=Gene;gene=aprA;gene_biotype=protein_coding;locus_tag=AL42_RS17710;old_locus_tag=AL42_02483 NZ_KK316784.1 Protein Homology CDS 2680977 2681192 . + 0 ID=cds-WP_003899306.1;Parent=gene-AL42_RS17710;Dbxref=GenBank:WP_003899306.1;Name=WP_003899306.1;gbkey=CDS;gene=aprA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007411091.1;locus_tag=AL42_RS17710;product=acid and phagosome regulated protein AprA;protein_id=WP_003899306.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2681304 2681468 . + . ID=gene-AL42_RS17715;Name=aprB;gbkey=Gene;gene=aprB;gene_biotype=protein_coding;locus_tag=AL42_RS17715;old_locus_tag=AL42_02484 NZ_KK316784.1 Protein Homology CDS 2681304 2681468 . + 0 ID=cds-WP_003907942.1;Parent=gene-AL42_RS17715;Dbxref=GenBank:WP_003907942.1;Name=WP_003907942.1;gbkey=CDS;gene=aprB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007411092.1;locus_tag=AL42_RS17715;product=acid and phagosome regulated protein AprB;protein_id=WP_003907942.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2681552 2682637 . + . ID=gene-AL42_RS17720;Name=AL42_RS17720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17720;old_locus_tag=AL42_02485 NZ_KK316784.1 Protein Homology CDS 2681552 2682637 . + 0 ID=cds-WP_003908846.1;Parent=gene-AL42_RS17720;Dbxref=GenBank:WP_003908846.1;Name=WP_003908846.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177878.1;locus_tag=AL42_RS17720;product=PE family protein;protein_id=WP_003908846.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2682662 2683717 . - . ID=gene-AL42_RS17725;Name=AL42_RS17725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17725;old_locus_tag=AL42_02486 NZ_KK316784.1 Protein Homology CDS 2682662 2683717 . - 0 ID=cds-WP_003412325.1;Parent=gene-AL42_RS17725;Dbxref=GenBank:WP_003412325.1;Name=WP_003412325.1;Ontology_term=GO:0005524,GO:0015419,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177879.1;locus_tag=AL42_RS17725;product=sulfate/molybdate ABC transporter ATP-binding protein;protein_id=WP_003412325.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2683734 2684552 . - . ID=gene-AL42_RS17730;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=AL42_RS17730;old_locus_tag=AL42_02487 NZ_KK316784.1 Protein Homology CDS 2683734 2684552 . - 0 ID=cds-WP_003412329.1;Parent=gene-AL42_RS17730;Dbxref=GenBank:WP_003412329.1;Name=WP_003412329.1;Ontology_term=GO:1902358,GO:0015419,GO:0005886,GO:0055052;gbkey=CDS;gene=cysW;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216914.1;locus_tag=AL42_RS17730;product=sulfate ABC transporter permease subunit CysW;protein_id=WP_003412329.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2684549 2685400 . - . ID=gene-AL42_RS17735;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=AL42_RS17735;old_locus_tag=AL42_02488 NZ_KK316784.1 Protein Homology CDS 2684549 2685400 . - 0 ID=cds-WP_003412332.1;Parent=gene-AL42_RS17735;Dbxref=GenBank:WP_003412332.1;Name=WP_003412332.1;Ontology_term=GO:1902358,GO:0015419,GO:0005886,GO:0055052;gbkey=CDS;gene=cysT;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216915.1;locus_tag=AL42_RS17735;product=sulfate ABC transporter permease subunit CysT;protein_id=WP_003412332.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2685397 2686467 . - . ID=gene-AL42_RS17740;Name=subI;gbkey=Gene;gene=subI;gene_biotype=protein_coding;locus_tag=AL42_RS17740;old_locus_tag=AL42_02489 NZ_KK316784.1 Protein Homology CDS 2685397 2686467 . - 0 ID=cds-WP_003901397.1;Parent=gene-AL42_RS17740;Dbxref=GenBank:WP_003901397.1;Name=WP_003901397.1;gbkey=CDS;gene=subI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216916.1;locus_tag=AL42_RS17740;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_003901397.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2686481 2686810 . + . ID=gene-AL42_RS17745;Name=AL42_RS17745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17745;old_locus_tag=AL42_02490 NZ_KK316784.1 Protein Homology CDS 2686481 2686810 . + 0 ID=cds-WP_003900513.1;Parent=gene-AL42_RS17745;Dbxref=GenBank:WP_003900513.1;Name=WP_003900513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216917.2;locus_tag=AL42_RS17745;product=hypothetical protein;protein_id=WP_003900513.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2686795 2686998 . - . ID=gene-AL42_RS17750;Name=AL42_RS17750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17750;old_locus_tag=AL42_02491 NZ_KK316784.1 Protein Homology CDS 2686795 2686998 . - 0 ID=cds-WP_003412337.1;Parent=gene-AL42_RS17750;Dbxref=GenBank:WP_003412337.1;Name=WP_003412337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177670.1;locus_tag=AL42_RS17750;product=hypothetical protein;protein_id=WP_003412337.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2687168 2689210 . + . ID=gene-AL42_RS17755;Name=AL42_RS17755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17755;old_locus_tag=AL42_02492 NZ_KK316784.1 Protein Homology CDS 2687168 2689210 . + 0 ID=cds-WP_003913344.1;Parent=gene-AL42_RS17755;Dbxref=GenBank:WP_003913344.1;Name=WP_003913344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003875915.1;locus_tag=AL42_RS17755;product=glycoside hydrolase family 15 protein;protein_id=WP_003913344.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2689288 2690043 . - . ID=gene-AL42_RS17760;Name=lppR;gbkey=Gene;gene=lppR;gene_biotype=protein_coding;locus_tag=AL42_RS17760;old_locus_tag=AL42_02493 NZ_KK316784.1 Protein Homology CDS 2689288 2690043 . - 0 ID=cds-WP_003412341.1;Parent=gene-AL42_RS17760;Dbxref=GenBank:WP_003412341.1;Name=WP_003412341.1;gbkey=CDS;gene=lppR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216919.1;locus_tag=AL42_RS17760;product=sensor domain-containing protein;protein_id=WP_003412341.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2690040 2692001 . - . ID=gene-AL42_RS17765;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=AL42_RS17765;old_locus_tag=AL42_02494 NZ_KK316784.1 Protein Homology CDS 2690040 2692001 . - 0 ID=cds-WP_003900516.1;Parent=gene-AL42_RS17765;Dbxref=GenBank:WP_003900516.1;Name=WP_003900516.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216920.1;locus_tag=AL42_RS17765;product=translation elongation factor 4;protein_id=WP_003900516.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2691989 2692591 . + . ID=gene-AL42_RS17770;Name=AL42_RS17770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17770;old_locus_tag=AL42_02495 NZ_KK316784.1 Protein Homology CDS 2691989 2692591 . + 0 ID=cds-WP_003899311.1;Parent=gene-AL42_RS17770;Dbxref=GenBank:WP_003899311.1;Name=WP_003899311.1;Ontology_term=GO:0006402,GO:0016075,GO:0003677,GO:0003723,GO:0004521;gbkey=CDS;go_function=DNA binding|0003677||IEA,RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;go_process=mRNA catabolic process|0006402||IEA,rRNA catabolic process|0016075||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899311.1;locus_tag=AL42_RS17770;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=WP_003899311.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2692763 2693191 . - . ID=gene-AL42_RS17775;Name=AL42_RS17775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17775;old_locus_tag=AL42_02496 NZ_KK316784.1 Protein Homology CDS 2692763 2693191 . - 0 ID=cds-WP_003412347.1;Parent=gene-AL42_RS17775;Dbxref=GenBank:WP_003412347.1;Name=WP_003412347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216922.1;locus_tag=AL42_RS17775;product=CBS domain-containing protein;protein_id=WP_003412347.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2693451 2694293 . + . ID=gene-AL42_RS17780;Name=AL42_RS17780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17780;old_locus_tag=AL42_02497 NZ_KK316784.1 Protein Homology CDS 2693451 2694293 . + 0 ID=cds-WP_003412350.1;Parent=gene-AL42_RS17780;Dbxref=GenBank:WP_003412350.1;Name=WP_003412350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216923.1;locus_tag=AL42_RS17780;product=Rv2407 family type 3 sulfatase;protein_id=WP_003412350.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2694840 2695043 . + . ID=gene-AL42_RS27680;Name=AL42_RS27680;end_range=2695043,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS27680;partial=true;pseudo=true NZ_KK316784.1 Protein Homology CDS 2694840 2695043 . + 0 ID=cds-AL42_RS27680;Parent=gene-AL42_RS27680;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005576,GO:0009986;end_range=2695043,.;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: protein motif:HMM:NF013127.6;locus_tag=AL42_RS27680;partial=true;product=PE family protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 2695269 2696108 . - . ID=gene-AL42_RS17785;Name=AL42_RS17785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17785;old_locus_tag=AL42_02499 NZ_KK316784.1 Protein Homology CDS 2695269 2696108 . - 0 ID=cds-WP_003910910.1;Parent=gene-AL42_RS17785;Dbxref=GenBank:WP_003910910.1;Name=WP_003910910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216925.1;locus_tag=AL42_RS17785;product=transglutaminase-like domain-containing protein;protein_id=WP_003910910.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2696108 2697085 . - . ID=gene-AL42_RS17790;Name=AL42_RS17790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17790;old_locus_tag=AL42_02500 NZ_KK316784.1 Protein Homology CDS 2696108 2697085 . - 0 ID=cds-WP_003412359.1;Parent=gene-AL42_RS17790;Dbxref=GenBank:WP_003412359.1;Name=WP_003412359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216926.1;locus_tag=AL42_RS17790;product=alpha-E domain-containing protein;protein_id=WP_003412359.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2697085 2698740 . - . ID=gene-AL42_RS17795;Name=AL42_RS17795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17795;old_locus_tag=AL42_02501 NZ_KK316784.1 Protein Homology CDS 2697085 2698740 . - 0 ID=cds-WP_003412363.1;Parent=gene-AL42_RS17795;Dbxref=GenBank:WP_003412363.1;Name=WP_003412363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216927.1;locus_tag=AL42_RS17795;product=circularly permuted type 2 ATP-grasp protein;protein_id=WP_003412363.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2698850 2699110 . + . ID=gene-AL42_RS17800;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=AL42_RS17800;old_locus_tag=AL42_02502 NZ_KK316784.1 Protein Homology CDS 2698850 2699110 . + 0 ID=cds-WP_003899314.1;Parent=gene-AL42_RS17800;Dbxref=GenBank:WP_003899314.1;Name=WP_003899314.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216928.1;locus_tag=AL42_RS17800;product=30S ribosomal protein S20;protein_id=WP_003899314.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2699126 2700076 . - . ID=gene-AL42_RS17805;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=AL42_RS17805;old_locus_tag=AL42_02503 NZ_KK316784.1 Protein Homology CDS 2699126 2700076 . - 0 ID=cds-WP_003903885.1;Parent=gene-AL42_RS17805;Dbxref=GenBank:WP_003903885.1;Name=WP_003903885.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216929.3;locus_tag=AL42_RS17805;product=DNA polymerase III subunit delta;protein_id=WP_003903885.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2700107 2701651 . - . ID=gene-AL42_RS17810;Name=AL42_RS17810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17810;old_locus_tag=AL42_02504 NZ_KK316784.1 Protein Homology CDS 2700107 2701651 . - 0 ID=cds-WP_003412371.1;Parent=gene-AL42_RS17810;Dbxref=GenBank:WP_003412371.1;Name=WP_003412371.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216930.1;locus_tag=AL42_RS17810;product=ComEC/Rec2 family competence protein;protein_id=WP_003412371.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2701666 2702559 . - . ID=gene-AL42_RS17815;Name=AL42_RS17815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17815;old_locus_tag=AL42_02505 NZ_KK316784.1 Protein Homology CDS 2701666 2702559 . - 0 ID=cds-WP_031721825.1;Parent=gene-AL42_RS17815;Dbxref=GenBank:WP_031721825.1;Name=WP_031721825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216931.1;locus_tag=AL42_RS17815;product=ComEA family DNA-binding protein;protein_id=WP_031721825.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2702899 2704125 . - . ID=gene-AL42_RS17820;Name=eis;gbkey=Gene;gene=eis;gene_biotype=protein_coding;locus_tag=AL42_RS17820;old_locus_tag=AL42_02506 NZ_KK316784.1 Protein Homology CDS 2702899 2704125 . - 0 ID=cds-WP_003412375.1;Parent=gene-AL42_RS17820;Dbxref=GenBank:WP_003412375.1;Name=WP_003412375.1;gbkey=CDS;gene=eis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010950714.1;locus_tag=AL42_RS17820;product=enhanced intracellular survival protein Eis;protein_id=WP_003412375.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2704247 2705089 . - . ID=gene-AL42_RS17825;Name=AL42_RS17825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17825;old_locus_tag=AL42_02507 NZ_KK316784.1 Protein Homology CDS 2704247 2705089 . - 0 ID=cds-WP_003412381.1;Parent=gene-AL42_RS17825;Dbxref=GenBank:WP_003412381.1;Name=WP_003412381.1;Ontology_term=GO:0008289;gbkey=CDS;go_function=lipid binding|0008289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216933.1;locus_tag=AL42_RS17825;product=DegV family protein;protein_id=WP_003412381.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2705170 2705913 . - . ID=gene-AL42_RS17830;Name=octT;gbkey=Gene;gene=octT;gene_biotype=protein_coding;locus_tag=AL42_RS17830;old_locus_tag=AL42_02508 NZ_KK316784.1 Protein Homology CDS 2705170 2705913 . - 0 ID=cds-WP_003412384.1;Parent=gene-AL42_RS17830;Dbxref=GenBank:WP_003412384.1;Name=WP_003412384.1;Ontology_term=GO:0016414;gbkey=CDS;gene=octT;go_function=diglucosylglycerate octanoyltransferase activity|0016414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216934.1;locus_tag=AL42_RS17830;product=diglucosylglycerate octanoyltransferase;protein_id=WP_003412384.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2705903 2706574 . - . ID=gene-AL42_RS17835;Name=gpgP;gbkey=Gene;gene=gpgP;gene_biotype=protein_coding;locus_tag=AL42_RS17835;old_locus_tag=AL42_02509 NZ_KK316784.1 Protein Homology CDS 2705903 2706574 . - 0 ID=cds-WP_003412388.1;Parent=gene-AL42_RS17835;Dbxref=GenBank:WP_003412388.1;Name=WP_003412388.1;gbkey=CDS;gene=gpgP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216935.1;locus_tag=AL42_RS17835;product=glucosyl-3-phosphoglycerate phosphatase;protein_id=WP_003412388.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2706571 2706951 . - . ID=gene-AL42_RS17840;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=AL42_RS17840;old_locus_tag=AL42_02510 NZ_KK316784.1 Protein Homology CDS 2706571 2706951 . - 0 ID=cds-WP_003412394.1;Parent=gene-AL42_RS17840;Dbxref=GenBank:WP_003412394.1;Name=WP_003412394.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216936.1;locus_tag=AL42_RS17840;product=ribosome silencing factor;protein_id=WP_003412394.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2706948 2707592 . - . ID=gene-AL42_RS17845;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=AL42_RS17845;old_locus_tag=AL42_02511 NZ_KK316784.1 Protein Homology CDS 2706948 2707592 . - 0 ID=cds-WP_256382343.1;Parent=gene-AL42_RS17845;Dbxref=GenBank:WP_256382343.1;Name=WP_256382343.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007169525.1;locus_tag=AL42_RS17845;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_256382343.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2707619 2707822 . - . ID=gene-AL42_RS28015;Name=AL42_RS28015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS28015 NZ_KK316784.1 Protein Homology CDS 2707619 2707822 . - 0 ID=cds-WP_003412401.1;Parent=gene-AL42_RS28015;Dbxref=GenBank:WP_003412401.1;Name=WP_003412401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003412401.1;locus_tag=AL42_RS28015;product=hypothetical protein;protein_id=WP_003412401.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2707858 2708130 . + . ID=gene-AL42_RS17850;Name=AL42_RS17850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17850;old_locus_tag=AL42_02512 NZ_KK316784.1 Protein Homology CDS 2707858 2708130 . + 0 ID=cds-WP_003412405.1;Parent=gene-AL42_RS17850;Dbxref=GenBank:WP_003412405.1;Name=WP_003412405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216938.1;locus_tag=AL42_RS17850;product=PIN domain-containing protein;protein_id=WP_003412405.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2708372 2709418 . + . ID=gene-AL42_RS17855;Name=AL42_RS17855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17855;old_locus_tag=AL42_02513 NZ_KK316784.1 Protein Homology CDS 2708372 2709418 . + 0 ID=cds-WP_003412408.1;Parent=gene-AL42_RS17855;Dbxref=GenBank:WP_003412408.1;Name=WP_003412408.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216939.1;locus_tag=AL42_RS17855;product=class I SAM-dependent methyltransferase;protein_id=WP_003412408.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2709551 2710552 . - . ID=gene-AL42_RS0105170;Name=AL42_RS0105170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0105170;old_locus_tag=AL42_02514 NZ_KK316784.1 Protein Homology CDS 2709551 2710552 . - 0 ID=cds-WP_003902269.1;Parent=gene-AL42_RS0105170;Dbxref=GenBank:WP_003902269.1;Name=WP_003902269.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033542.1;locus_tag=AL42_RS0105170;product=IS110 family RNA-guided transposase;protein_id=WP_003902269.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2710641 2712083 . - . ID=gene-AL42_RS17860;Name=AL42_RS17860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17860;old_locus_tag=AL42_02515 NZ_KK316784.1 Protein Homology CDS 2710641 2712083 . - 0 ID=cds-WP_003412513.1;Parent=gene-AL42_RS17860;Dbxref=GenBank:WP_003412513.1;Name=WP_003412513.1;Ontology_term=GO:0009297;gbkey=CDS;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216941.1;locus_tag=AL42_RS17860;product=vWA domain-containing protein;protein_id=WP_003412513.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2712083 2712958 . - . ID=gene-AL42_RS17865;Name=AL42_RS17865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17865;old_locus_tag=AL42_02516 NZ_KK316784.1 Protein Homology CDS 2712083 2712958 . - 0 ID=cds-WP_003412514.1;Parent=gene-AL42_RS17865;Dbxref=GenBank:WP_003412514.1;Name=WP_003412514.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216942.1;locus_tag=AL42_RS17865;product=AAA family ATPase;protein_id=WP_003412514.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2712985 2714232 . - . ID=gene-AL42_RS17870;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=AL42_RS17870;old_locus_tag=AL42_02517 NZ_KK316784.1 Protein Homology CDS 2712985 2714232 . - 0 ID=cds-WP_003412516.1;Parent=gene-AL42_RS17870;Dbxref=GenBank:WP_003412516.1;Name=WP_003412516.1;Ontology_term=GO:0006561,GO:0004350,GO:0016620;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216943.1;locus_tag=AL42_RS17870;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_003412516.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2714315 2714700 . - . ID=gene-AL42_RS0105180;Name=AL42_RS0105180;end_range=2714700,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS0105180;partial=true;pseudo=true NZ_KK316784.1 Protein Homology CDS 2714315 2714700 . - 0 ID=cds-AL42_RS0105180;Parent=gene-AL42_RS0105180;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2714700,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010908684.1;locus_tag=AL42_RS0105180;partial=true;product=LysR substrate-binding domain-containing protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 2714948 2715535 . + . ID=gene-AL42_RS17880;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=AL42_RS17880;old_locus_tag=AL42_02519 NZ_KK316784.1 Protein Homology CDS 2714948 2715535 . + 0 ID=cds-WP_003412529.1;Parent=gene-AL42_RS17880;Dbxref=GenBank:WP_003412529.1;Name=WP_003412529.1;gbkey=CDS;gene=ahpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216944.1;locus_tag=AL42_RS17880;product=peroxiredoxin AhpC;protein_id=WP_003412529.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2715561 2716094 . + . ID=gene-AL42_RS17885;Name=ahpD;gbkey=Gene;gene=ahpD;gene_biotype=protein_coding;locus_tag=AL42_RS17885;old_locus_tag=AL42_02520 NZ_KK316784.1 Protein Homology CDS 2715561 2716094 . + 0 ID=cds-WP_003412536.1;Parent=gene-AL42_RS17885;Dbxref=GenBank:WP_003412536.1;Name=WP_003412536.1;gbkey=CDS;gene=ahpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216945.1;locus_tag=AL42_RS17885;product=alkyl hydroperoxide reductase;protein_id=WP_003412536.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2716091 2716675 . - . ID=gene-AL42_RS17890;Name=AL42_RS17890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17890;old_locus_tag=AL42_02521 NZ_KK316784.1 Protein Homology CDS 2716091 2716675 . - 0 ID=cds-WP_003412549.1;Parent=gene-AL42_RS17890;Dbxref=GenBank:WP_003412549.1;Name=WP_003412549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177881.1;locus_tag=AL42_RS17890;product=PPE family protein;protein_id=WP_003412549.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2716722 2717021 . - . ID=gene-AL42_RS17895;Name=AL42_RS17895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17895;old_locus_tag=AL42_02522 NZ_KK316784.1 Protein Homology CDS 2716722 2717021 . - 0 ID=cds-WP_003412551.1;Parent=gene-AL42_RS17895;Dbxref=GenBank:WP_003412551.1;Name=WP_003412551.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177882.1;locus_tag=AL42_RS17895;product=PE family protein;protein_id=WP_003412551.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2717192 2717602 . - . ID=gene-AL42_RS17900;Name=AL42_RS17900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17900;old_locus_tag=AL42_02523 NZ_KK316784.1 Protein Homology CDS 2717192 2717602 . - 0 ID=cds-WP_003900520.1;Parent=gene-AL42_RS17900;Dbxref=GenBank:WP_003900520.1;Name=WP_003900520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216948.1;locus_tag=AL42_RS17900;product=hypothetical protein;protein_id=WP_003900520.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2717599 2717889 . - . ID=gene-AL42_RS17905;Name=nrtS;gbkey=Gene;gene=nrtS;gene_biotype=protein_coding;locus_tag=AL42_RS17905;old_locus_tag=AL42_02524 NZ_KK316784.1 Protein Homology CDS 2717599 2717889 . - 0 ID=cds-WP_003902270.1;Parent=gene-AL42_RS17905;Dbxref=GenBank:WP_003902270.1;Name=WP_003902270.1;gbkey=CDS;gene=nrtS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216949.1;locus_tag=AL42_RS17905;product=nitrate/nitrite transporter NrtS;protein_id=WP_003902270.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2717870 2719101 . - . ID=gene-AL42_RS17910;Name=AL42_RS17910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS17910;old_locus_tag=AL42_02525;pseudo=true NZ_KK316784.1 Protein Homology CDS 2717870 2719101 . - 0 ID=cds-AL42_RS17910;Parent=gene-AL42_RS17910;Note=frameshifted;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216950.1;locus_tag=AL42_RS17910;product=mechanosensitive ion channel domain-containing protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 2719098 2721290 . - . ID=gene-AL42_RS17915;Name=AL42_RS17915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17915;old_locus_tag=AL42_02526 NZ_KK316784.1 Protein Homology CDS 2719098 2721290 . - 0 ID=cds-WP_003412557.1;Parent=gene-AL42_RS17915;Dbxref=GenBank:WP_003412557.1;Name=WP_003412557.1;Ontology_term=GO:0009190,GO:0035556;gbkey=CDS;go_process=cyclic nucleotide biosynthetic process|0009190||IEA,intracellular signal transduction|0035556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216951.1;locus_tag=AL42_RS17915;product=adenylate/guanylate cyclase domain-containing protein;protein_id=WP_003412557.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2721771 2722685 . + . ID=gene-AL42_RS17920;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=AL42_RS17920;old_locus_tag=AL42_02527 NZ_KK316784.1 Protein Homology CDS 2721771 2722685 . + 0 ID=cds-WP_003412561.1;Parent=gene-AL42_RS17920;Dbxref=GenBank:WP_003412561.1;Name=WP_003412561.1;gbkey=CDS;gene=rbsK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216952.1;locus_tag=AL42_RS17920;product=ribokinase RbsK;protein_id=WP_003412561.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2722917 2723335 . + . ID=gene-AL42_RS0105195;Name=AL42_RS0105195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS0105195;old_locus_tag=AL42_02528;pseudo=true NZ_KK316784.1 Protein Homology CDS 2722917 2723335 . + 0 ID=cds-AL42_RS0105195;Parent=gene-AL42_RS0105195;Note=frameshifted;Ontology_term=GO:0032259,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216953.1;locus_tag=AL42_RS0105195;product=methyltransferase family protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 2723332 2725338 . - . ID=gene-AL42_RS17925;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=AL42_RS17925;old_locus_tag=AL42_02529 NZ_KK316784.1 Protein Homology CDS 2723332 2725338 . - 0 ID=cds-WP_055381138.1;Parent=gene-AL42_RS17925;Dbxref=GenBank:WP_055381138.1;Name=WP_055381138.1;Ontology_term=GO:0008152,GO:0009435,GO:0003952,GO:0004359,GO:0005524;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,ATP binding|0005524||IEA;go_process=metabolic process|0008152||IEA,NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216954.2;locus_tag=AL42_RS17925;product=NAD(+) synthase;protein_id=WP_055381138.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2725249 2725527 . + . ID=gene-AL42_RS27690;Name=AL42_RS27690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27690;old_locus_tag=AL42_02530 NZ_KK316784.1 Protein Homology CDS 2725249 2725527 . + 0 ID=cds-WP_010886145.1;Parent=gene-AL42_RS27690;Dbxref=GenBank:WP_010886145.1;Name=WP_010886145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177671.1;locus_tag=AL42_RS27690;product=hypothetical protein;protein_id=WP_010886145.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2725657 2726787 . - . ID=gene-AL42_RS17930;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=AL42_RS17930;old_locus_tag=AL42_02531 NZ_KK316784.1 Protein Homology CDS 2725657 2726787 . - 0 ID=cds-WP_003412568.1;Parent=gene-AL42_RS17930;Dbxref=GenBank:WP_003412568.1;Name=WP_003412568.1;Ontology_term=GO:0006561,GO:0004349,GO:0005737;gbkey=CDS;gene=proB;go_component=cytoplasm|0005737||IEA;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216955.1;locus_tag=AL42_RS17930;product=glutamate 5-kinase;protein_id=WP_003412568.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2726787 2728226 . - . ID=gene-AL42_RS17935;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=AL42_RS17935;old_locus_tag=AL42_02532 NZ_KK316784.1 Protein Homology CDS 2726787 2728226 . - 0 ID=cds-WP_003902272.1;Parent=gene-AL42_RS17935;Dbxref=GenBank:WP_003902272.1;Name=WP_003902272.1;Ontology_term=GO:0000166,GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=obgE;go_function=nucleotide binding|0000166||IEA,magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216956.1;locus_tag=AL42_RS17935;product=GTPase ObgE;protein_id=WP_003902272.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2728312 2728572 . - . ID=gene-AL42_RS17940;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=AL42_RS17940;old_locus_tag=AL42_02533 NZ_KK316784.1 Protein Homology CDS 2728312 2728572 . - 0 ID=cds-WP_003412574.1;Parent=gene-AL42_RS17940;Dbxref=GenBank:WP_003412574.1;Name=WP_003412574.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216957.1;locus_tag=AL42_RS17940;product=50S ribosomal protein L27;protein_id=WP_003412574.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2728587 2728901 . - . ID=gene-AL42_RS17945;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=AL42_RS17945;old_locus_tag=AL42_02534 NZ_KK316784.1 Protein Homology CDS 2728587 2728901 . - 0 ID=cds-WP_003412578.1;Parent=gene-AL42_RS17945;Dbxref=GenBank:WP_003412578.1;Name=WP_003412578.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216958.1;locus_tag=AL42_RS17945;product=50S ribosomal protein L21;protein_id=WP_003412578.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2729249 2730724 . + . ID=gene-AL42_RS17950;Name=dctA;gbkey=Gene;gene=dctA;gene_biotype=protein_coding;locus_tag=AL42_RS17950;old_locus_tag=AL42_02535 NZ_KK316784.1 Protein Homology CDS 2729249 2730724 . + 0 ID=cds-WP_003412582.1;Parent=gene-AL42_RS17950;Dbxref=GenBank:WP_003412582.1;Name=WP_003412582.1;Ontology_term=GO:0015293,GO:0016020;gbkey=CDS;gene=dctA;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216959.1;locus_tag=AL42_RS17950;product=cation:dicarboxylate symporter family transporter;protein_id=WP_003412582.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2730663 2733524 . - . ID=gene-AL42_RS17955;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=AL42_RS17955;old_locus_tag=AL42_02536 NZ_KK316784.1 Protein Homology CDS 2730663 2733524 . - 0 ID=cds-WP_003899322.1;Parent=gene-AL42_RS17955;Dbxref=GenBank:WP_003899322.1;Name=WP_003899322.1;Ontology_term=GO:0006397,GO:0003723,GO:0004519,GO:0004540,GO:0046872;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,endonuclease activity|0004519||IEA,RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=mRNA processing|0006397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216960.1;locus_tag=AL42_RS17955;product=ribonuclease E;protein_id=WP_003899322.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2733854 2734264 . - . ID=gene-AL42_RS17960;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=AL42_RS17960;old_locus_tag=AL42_02537 NZ_KK316784.1 Protein Homology CDS 2733854 2734264 . - 0 ID=cds-WP_003412592.1;Parent=gene-AL42_RS17960;Dbxref=GenBank:WP_003412592.1;Name=WP_003412592.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216961.1;locus_tag=AL42_RS17960;product=nucleoside-diphosphate kinase;protein_id=WP_003412592.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2734307 2734678 . - . ID=gene-AL42_RS17965;Name=AL42_RS17965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17965;old_locus_tag=AL42_02538 NZ_KK316784.1 Protein Homology CDS 2734307 2734678 . - 0 ID=cds-WP_003412596.1;Parent=gene-AL42_RS17965;Dbxref=GenBank:WP_003412596.1;Name=WP_003412596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216962.1;locus_tag=AL42_RS17965;product=DUF4233 domain-containing protein;protein_id=WP_003412596.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2734675 2736138 . - . ID=gene-AL42_RS17970;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=AL42_RS17970;old_locus_tag=AL42_02539 NZ_KK316784.1 Protein Homology CDS 2734675 2736138 . - 0 ID=cds-WP_003899324.1;Parent=gene-AL42_RS17970;Dbxref=GenBank:WP_003899324.1;Name=WP_003899324.1;Ontology_term=GO:0009396,GO:0046654,GO:0004326,GO:0008841;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,dihydrofolate synthase activity|0008841||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA,tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216963.1;locus_tag=AL42_RS17970;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_003899324.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2736135 2738795 . - . ID=gene-AL42_RS17975;Name=valS;gbkey=Gene;gene=valS;gene_biotype=protein_coding;locus_tag=AL42_RS17975;old_locus_tag=AL42_02540 NZ_KK316784.1 Protein Homology CDS 2736135 2738795 . - 0 ID=cds-WP_003412604.1;Parent=gene-AL42_RS17975;Dbxref=GenBank:WP_003412604.1;Name=WP_003412604.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;gene=valS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010908358.1;locus_tag=AL42_RS17975;product=valine--tRNA ligase;protein_id=WP_003412604.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2738853 2740112 . - . ID=gene-AL42_RS17980;Name=AL42_RS17980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17980;old_locus_tag=AL42_02541 NZ_KK316784.1 Protein Homology CDS 2738853 2740112 . - 0 ID=cds-WP_003412609.1;Parent=gene-AL42_RS17980;Dbxref=GenBank:WP_003412609.1;Name=WP_003412609.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216965.1;locus_tag=AL42_RS17980;product=saccharopine dehydrogenase family protein;protein_id=WP_003412609.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2740202 2740720 . - . ID=gene-AL42_RS17985;Name=rpfE;gbkey=Gene;gene=rpfE;gene_biotype=protein_coding;locus_tag=AL42_RS17985;old_locus_tag=AL42_02542 NZ_KK316784.1 Protein Homology CDS 2740202 2740720 . - 0 ID=cds-WP_003905853.1;Parent=gene-AL42_RS17985;Dbxref=GenBank:WP_003905853.1;Name=WP_003905853.1;gbkey=CDS;gene=rpfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216966.1;locus_tag=AL42_RS17985;product=resuscitation-promoting factor protein RpfE;protein_id=WP_003905853.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2740802 2741200 . + . ID=gene-AL42_RS17990;Name=AL42_RS17990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17990;old_locus_tag=AL42_02543 NZ_KK316784.1 Protein Homology CDS 2740802 2741200 . + 0 ID=cds-WP_031721826.1;Parent=gene-AL42_RS17990;Dbxref=GenBank:WP_031721826.1;Name=WP_031721826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216967.1;locus_tag=AL42_RS17990;product=hypothetical protein;protein_id=WP_031721826.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2741388 2741534 . - . ID=gene-AL42_RS17995;Name=AL42_RS17995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS17995;old_locus_tag=AL42_02544 NZ_KK316784.1 Protein Homology CDS 2741388 2741534 . - 0 ID=cds-WP_003908854.1;Parent=gene-AL42_RS17995;Dbxref=GenBank:WP_003908854.1;Name=WP_003908854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216968.1;locus_tag=AL42_RS17995;product=hypothetical protein;protein_id=WP_003908854.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2741558 2742163 . - . ID=gene-AL42_RS18000;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=AL42_RS18000;old_locus_tag=AL42_02545 NZ_KK316784.1 Protein Homology CDS 2741558 2742163 . - 0 ID=cds-WP_003412618.1;Parent=gene-AL42_RS18000;Dbxref=GenBank:WP_003412618.1;Name=WP_003412618.1;Ontology_term=GO:0006777,GO:0061603;gbkey=CDS;gene=mobA;go_function=molybdenum cofactor guanylyltransferase activity|0061603||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216969.1;locus_tag=AL42_RS18000;product=molybdenum cofactor guanylyltransferase;protein_id=WP_003412618.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2742165 2743286 . - . ID=gene-AL42_RS18005;Name=AL42_RS18005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18005;old_locus_tag=AL42_02546 NZ_KK316784.1 Protein Homology CDS 2742165 2743286 . - 0 ID=cds-WP_003412624.1;Parent=gene-AL42_RS18005;Dbxref=GenBank:WP_003412624.1;Name=WP_003412624.1;Ontology_term=GO:0030976,GO:0046872;gbkey=CDS;go_function=thiamine pyrophosphate binding|0030976||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216970.1;locus_tag=AL42_RS18005;product=2-oxoacid:ferredoxin oxidoreductase subunit beta;protein_id=WP_003412624.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2743283 2745244 . - . ID=gene-AL42_RS18010;Name=AL42_RS18010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18010;old_locus_tag=AL42_02547 NZ_KK316784.1 Protein Homology CDS 2743283 2745244 . - 0 ID=cds-WP_003412627.1;Parent=gene-AL42_RS18010;Dbxref=GenBank:WP_003412627.1;Name=WP_003412627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216971.1;locus_tag=AL42_RS18010;product=2-oxoacid:acceptor oxidoreductase subunit alpha;protein_id=WP_003412627.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2745476 2746732 . - . ID=gene-AL42_RS18015;Name=AL42_RS18015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18015;old_locus_tag=AL42_02548 NZ_KK316784.1 Protein Homology CDS 2745476 2746732 . - 0 ID=cds-WP_003412631.1;Parent=gene-AL42_RS18015;Dbxref=GenBank:WP_003412631.1;Name=WP_003412631.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216972.1;locus_tag=AL42_RS18015;product=MFS transporter;protein_id=WP_003412631.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2746748 2748028 . - . ID=gene-AL42_RS18020;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=AL42_RS18020;old_locus_tag=AL42_02549 NZ_KK316784.1 Protein Homology CDS 2746748 2748028 . - 0 ID=cds-WP_003412634.1;Parent=gene-AL42_RS18020;Dbxref=GenBank:WP_003412634.1;Name=WP_003412634.1;Ontology_term=GO:0005524,GO:0008270,GO:0016887,GO:0046983;gbkey=CDS;gene=clpX;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,ATP hydrolysis activity|0016887||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216973.1;locus_tag=AL42_RS18020;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=WP_003412634.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2748319 2749227 . + . ID=gene-AL42_RS18025;Name=mmuM;gbkey=Gene;gene=mmuM;gene_biotype=protein_coding;locus_tag=AL42_RS18025;old_locus_tag=AL42_02550 NZ_KK316784.1 Protein Homology CDS 2748319 2749227 . + 0 ID=cds-WP_003412639.1;Parent=gene-AL42_RS18025;Dbxref=GenBank:WP_003412639.1;Name=WP_003412639.1;Ontology_term=GO:0009086,GO:0047150;gbkey=CDS;gene=mmuM;go_function=betaine-homocysteine S-methyltransferase activity|0047150||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216974.1;locus_tag=AL42_RS18025;product=homocysteine S-methyltransferase;protein_id=WP_003412639.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2749394 2750920 . + . ID=gene-AL42_RS18030;Name=jefA;gbkey=Gene;gene=jefA;gene_biotype=protein_coding;locus_tag=AL42_RS18030;old_locus_tag=AL42_02551 NZ_KK316784.1 Protein Homology CDS 2749394 2750920 . + 0 ID=cds-WP_003412642.1;Parent=gene-AL42_RS18030;Dbxref=GenBank:WP_003412642.1;Name=WP_003412642.1;gbkey=CDS;gene=jefA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216975.1;locus_tag=AL42_RS18030;product=multidrug efflux pump JefA;protein_id=WP_003412642.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2751071 2751715 . - . ID=gene-AL42_RS18035;Name=clpP2;gbkey=Gene;gene=clpP2;gene_biotype=protein_coding;locus_tag=AL42_RS18035;old_locus_tag=AL42_02552 NZ_KK316784.1 Protein Homology CDS 2751071 2751715 . - 0 ID=cds-WP_003412648.1;Parent=gene-AL42_RS18035;Dbxref=GenBank:WP_003412648.1;Name=WP_003412648.1;gbkey=CDS;gene=clpP2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216976.1;locus_tag=AL42_RS18035;product=ATP-dependent CLP protease proteolytic subunit ClpP2;protein_id=WP_003412648.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2751712 2752314 . - . ID=gene-AL42_RS18040;Name=clpP1;gbkey=Gene;gene=clpP1;gene_biotype=protein_coding;locus_tag=AL42_RS18040;old_locus_tag=AL42_02553 NZ_KK316784.1 Protein Homology CDS 2751712 2752314 . - 0 ID=cds-WP_003412650.1;Parent=gene-AL42_RS18040;Dbxref=GenBank:WP_003412650.1;Name=WP_003412650.1;gbkey=CDS;gene=clpP1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177883.1;locus_tag=AL42_RS18040;product=ATP-dependent CLP protease proteolytic subunit ClpP1;protein_id=WP_003412650.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2752431 2753831 . - . ID=gene-AL42_RS18045;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=AL42_RS18045;old_locus_tag=AL42_02554 NZ_KK316784.1 Protein Homology CDS 2752431 2753831 . - 0 ID=cds-WP_003899331.1;Parent=gene-AL42_RS18045;Dbxref=GenBank:WP_003899331.1;Name=WP_003899331.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216978.1;locus_tag=AL42_RS18045;product=trigger factor;protein_id=WP_003899331.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2753868 2753944 . - . ID=gene-AL42_RS18050;Name=AL42_RS18050;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL42_RS18050;old_locus_tag=AL42_02555 NZ_KK316784.1 tRNAscan-SE tRNA 2753868 2753944 . - . ID=rna-AL42_RS18050;Parent=gene-AL42_RS18050;anticodon=(pos:complement(2753908..2753910));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS18050;product=tRNA-Pro NZ_KK316784.1 tRNAscan-SE exon 2753868 2753944 . - . ID=exon-AL42_RS18050-1;Parent=rna-AL42_RS18050;anticodon=(pos:complement(2753908..2753910));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS18050;product=tRNA-Pro NZ_KK316784.1 RefSeq gene 2754081 2754151 . + . ID=gene-AL42_RS18055;Name=AL42_RS18055;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL42_RS18055;old_locus_tag=AL42_02556 NZ_KK316784.1 tRNAscan-SE tRNA 2754081 2754151 . + . ID=rna-AL42_RS18055;Parent=gene-AL42_RS18055;anticodon=(pos:2754113..2754115);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS18055;product=tRNA-Gly NZ_KK316784.1 tRNAscan-SE exon 2754081 2754151 . + . ID=exon-AL42_RS18055-1;Parent=rna-AL42_RS18055;anticodon=(pos:2754113..2754115);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS18055;product=tRNA-Gly NZ_KK316784.1 RefSeq gene 2754195 2755379 . + . ID=gene-AL42_RS18060;Name=lipP;gbkey=Gene;gene=lipP;gene_biotype=protein_coding;locus_tag=AL42_RS18060;old_locus_tag=AL42_02557 NZ_KK316784.1 Protein Homology CDS 2754195 2755379 . + 0 ID=cds-WP_003412656.1;Parent=gene-AL42_RS18060;Dbxref=GenBank:WP_003412656.1;Name=WP_003412656.1;Ontology_term=GO:0016787;gbkey=CDS;gene=lipP;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216979.1;locus_tag=AL42_RS18060;product=serine hydrolase domain-containing protein;protein_id=WP_003412656.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2755399 2756205 . - . ID=gene-AL42_RS18065;Name=AL42_RS18065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18065;old_locus_tag=AL42_02558 NZ_KK316784.1 Protein Homology CDS 2755399 2756205 . - 0 ID=cds-WP_003412657.1;Parent=gene-AL42_RS18065;Dbxref=GenBank:WP_003412657.1;Name=WP_003412657.1;Ontology_term=GO:0006281,GO:0006284,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0140078;gbkey=CDS;go_function=damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216980.1;locus_tag=AL42_RS18065;product=Fpg/Nei family DNA glycosylase;protein_id=WP_003412657.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2756211 2756690 . - . ID=gene-AL42_RS18070;Name=rpiB;gbkey=Gene;gene=rpiB;gene_biotype=protein_coding;locus_tag=AL42_RS18070;old_locus_tag=AL42_02559 NZ_KK316784.1 Protein Homology CDS 2756211 2756690 . - 0 ID=cds-WP_003412660.1;Parent=gene-AL42_RS18070;Dbxref=GenBank:WP_003412660.1;Name=WP_003412660.1;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;gene=rpiB;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019738062.1;locus_tag=AL42_RS18070;product=ribose-5-phosphate isomerase;protein_id=WP_003412660.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2756801 2757424 . - . ID=gene-AL42_RS18075;Name=AL42_RS18075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18075;old_locus_tag=AL42_02560 NZ_KK316784.1 Protein Homology CDS 2756801 2757424 . - 0 ID=cds-WP_003412664.1;Parent=gene-AL42_RS18075;Dbxref=GenBank:WP_003412664.1;Name=WP_003412664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216982.1;locus_tag=AL42_RS18075;product=Rv2466c family mycothiol-dependent reductase;protein_id=WP_003412664.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2757526 2760111 . + . ID=gene-AL42_RS18080;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=AL42_RS18080;old_locus_tag=AL42_02561 NZ_KK316784.1 Protein Homology CDS 2757526 2760111 . + 0 ID=cds-WP_003412666.1;Parent=gene-AL42_RS18080;Dbxref=GenBank:WP_003412666.1;Name=WP_003412666.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237,GO:0008270;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177885.1;locus_tag=AL42_RS18080;product=aminopeptidase N;protein_id=WP_003412666.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2760184 2760651 . - . ID=gene-AL42_RS18085;Name=AL42_RS18085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18085;old_locus_tag=AL42_02562 NZ_KK316784.1 Protein Homology CDS 2760184 2760651 . - 0 ID=cds-WP_003904843.1;Parent=gene-AL42_RS18085;Dbxref=GenBank:WP_003904843.1;Name=WP_003904843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003904843.1;locus_tag=AL42_RS18085;product=DUF5130 domain-containing protein;protein_id=WP_003904843.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2760638 2760871 . - . ID=gene-AL42_RS18090;Name=ctaJ;gbkey=Gene;gene=ctaJ;gene_biotype=protein_coding;locus_tag=AL42_RS18090;old_locus_tag=AL42_02563 NZ_KK316784.1 Protein Homology CDS 2760638 2760871 . - 0 ID=cds-WP_003412671.1;Parent=gene-AL42_RS18090;Dbxref=GenBank:WP_003412671.1;Name=WP_003412671.1;gbkey=CDS;gene=ctaJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007411168.1;locus_tag=AL42_RS18090;product=aa3-type cytochrome oxidase subunit CtaJ;protein_id=WP_003412671.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2760907 2761575 . - . ID=gene-AL42_RS18095;Name=AL42_RS18095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18095;old_locus_tag=AL42_02564 NZ_KK316784.1 Protein Homology CDS 2760907 2761575 . - 0 ID=cds-WP_003899334.1;Parent=gene-AL42_RS18095;Dbxref=GenBank:WP_003899334.1;Name=WP_003899334.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216985.1;locus_tag=AL42_RS18095;product=HNH endonuclease;protein_id=WP_003899334.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2761718 2762104 . + . ID=gene-AL42_RS18100;Name=glbO;gbkey=Gene;gene=glbO;gene_biotype=protein_coding;locus_tag=AL42_RS18100;old_locus_tag=AL42_02565 NZ_KK316784.1 Protein Homology CDS 2761718 2762104 . + 0 ID=cds-WP_003412688.1;Parent=gene-AL42_RS18100;Dbxref=GenBank:WP_003412688.1;Name=WP_003412688.1;gbkey=CDS;gene=glbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216986.1;locus_tag=AL42_RS18100;product=group 2 truncated hemoglobin GlbO;protein_id=WP_003412688.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2762104 2763744 . + . ID=gene-AL42_RS18105;Name=aglA;gbkey=Gene;gene=aglA;gene_biotype=protein_coding;locus_tag=AL42_RS18105;old_locus_tag=AL42_02566 NZ_KK316784.1 Protein Homology CDS 2762104 2763744 . + 0 ID=cds-WP_003905855.1;Parent=gene-AL42_RS18105;Dbxref=GenBank:WP_003905855.1;Name=WP_003905855.1;gbkey=CDS;gene=aglA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216987.1;locus_tag=AL42_RS18105;product=glycoside hydrolase family 13 protein;protein_id=WP_003905855.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2763812 2764105 . + . ID=gene-AL42_RS18110;Name=AL42_RS18110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18110;old_locus_tag=AL42_02567 NZ_KK316784.1 Protein Homology CDS 2763812 2764105 . + 0 ID=cds-WP_003899337.1;Parent=gene-AL42_RS18110;Dbxref=GenBank:WP_003899337.1;Name=WP_003899337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216988.1;locus_tag=AL42_RS18110;product=hypothetical protein;protein_id=WP_003899337.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2764108 2764824 . + . ID=gene-AL42_RS18115;Name=AL42_RS18115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18115;old_locus_tag=AL42_02568 NZ_KK316784.1 Protein Homology CDS 2764108 2764824 . + 0 ID=cds-WP_003412695.1;Parent=gene-AL42_RS18115;Dbxref=GenBank:WP_003412695.1;Name=WP_003412695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216989.1;locus_tag=AL42_RS18115;product=hypothetical protein;protein_id=WP_003412695.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2764856 2765509 . - . ID=gene-AL42_RS18120;Name=AL42_RS18120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18120;old_locus_tag=AL42_02569 NZ_KK316784.1 Protein Homology CDS 2764856 2765509 . - 0 ID=cds-WP_003412698.1;Parent=gene-AL42_RS18120;Dbxref=GenBank:WP_003412698.1;Name=WP_003412698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216990.1;locus_tag=AL42_RS18120;product=DUF8010 domain-containing protein;protein_id=WP_003412698.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2765515 2765931 . - . ID=gene-AL42_RS18125;Name=AL42_RS18125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18125;old_locus_tag=AL42_02570 NZ_KK316784.1 Protein Homology CDS 2765515 2765931 . - 0 ID=cds-WP_003412703.1;Parent=gene-AL42_RS18125;Dbxref=GenBank:WP_003412703.1;Name=WP_003412703.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216991.1;locus_tag=AL42_RS18125;product=acyl-CoA thioesterase;protein_id=WP_003412703.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2765928 2770802 . - . ID=gene-AL42_RS18130;Name=gdh;gbkey=Gene;gene=gdh;gene_biotype=protein_coding;locus_tag=AL42_RS18130;old_locus_tag=AL42_02571 NZ_KK316784.1 Protein Homology CDS 2765928 2770802 . - 0 ID=cds-WP_003899340.1;Parent=gene-AL42_RS18130;Dbxref=GenBank:WP_003899340.1;Name=WP_003899340.1;Ontology_term=GO:0004352;gbkey=CDS;gene=gdh;go_function=glutamate dehydrogenase (NAD+) activity|0004352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216992.1;locus_tag=AL42_RS18130;product=NAD-glutamate dehydrogenase;protein_id=WP_003899340.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2770906 2772582 . - . ID=gene-AL42_RS18135;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=AL42_RS18135;old_locus_tag=AL42_02572 NZ_KK316784.1 Protein Homology CDS 2770906 2772582 . - 0 ID=cds-WP_003412708.1;Parent=gene-AL42_RS18135;Dbxref=GenBank:WP_003412708.1;Name=WP_003412708.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216993.1;locus_tag=AL42_RS18135;product=energy-dependent translational throttle protein EttA;protein_id=WP_003412708.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2772663 2773169 . - . ID=gene-AL42_RS18140;Name=AL42_RS18140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18140;old_locus_tag=AL42_02573 NZ_KK316784.1 Protein Homology CDS 2772663 2773169 . - 0 ID=cds-WP_003900529.1;Parent=gene-AL42_RS18140;Dbxref=GenBank:WP_003900529.1;Name=WP_003900529.1;Ontology_term=GO:0006260,GO:0003697;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900529.1;locus_tag=AL42_RS18140;product=single-stranded DNA-binding protein;protein_id=WP_003900529.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2773757 2774080 . - . ID=gene-AL42_RS18145;Name=AL42_RS18145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18145;old_locus_tag=AL42_02574 NZ_KK316784.1 Protein Homology CDS 2773757 2774080 . - 0 ID=cds-WP_003902275.1;Parent=gene-AL42_RS18145;Dbxref=GenBank:WP_003902275.1;Name=WP_003902275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216997.1;locus_tag=AL42_RS18145;product=hypothetical protein;protein_id=WP_003902275.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2774096 2776465 . - . ID=gene-AL42_RS18150;Name=AL42_RS18150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18150;old_locus_tag=AL42_02575 NZ_KK316784.1 Protein Homology CDS 2774096 2776465 . - 0 ID=cds-WP_003901413.1;Parent=gene-AL42_RS18150;Dbxref=GenBank:WP_003901413.1;Name=WP_003901413.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216998.1;locus_tag=AL42_RS18150;product=glycerol-3-phosphate 1-O-acyltransferase;protein_id=WP_003901413.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2776462 2778204 . - . ID=gene-AL42_RS18155;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;locus_tag=AL42_RS18155;old_locus_tag=AL42_02576 NZ_KK316784.1 Protein Homology CDS 2776462 2778204 . - 0 ID=cds-WP_003899343.1;Parent=gene-AL42_RS18155;Dbxref=GenBank:WP_003899343.1;Name=WP_003899343.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;gene=plsC;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216999.1;locus_tag=AL42_RS18155;product=HAD-IB family hydrolase/lysophospholipid acyltransferase family protein;protein_id=WP_003899343.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2778201 2779676 . - . ID=gene-AL42_RS18160;Name=AL42_RS18160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18160;old_locus_tag=AL42_02577 NZ_KK316784.1 Protein Homology CDS 2778201 2779676 . - 0 ID=cds-WP_003412717.1;Parent=gene-AL42_RS18160;Dbxref=GenBank:WP_003412717.1;Name=WP_003412717.1;Ontology_term=GO:0045017,GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;go_process=glycerolipid biosynthetic process|0045017||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217000.1;locus_tag=AL42_RS18160;product=WS/DGAT/MGAT family O-acyltransferase;protein_id=WP_003412717.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2779905 2781170 . - . ID=gene-AL42_RS18165;Name=lipQ;gbkey=Gene;gene=lipQ;gene_biotype=protein_coding;locus_tag=AL42_RS18165;old_locus_tag=AL42_02578 NZ_KK316784.1 Protein Homology CDS 2779905 2781170 . - 0 ID=cds-WP_003902276.1;Parent=gene-AL42_RS18165;Dbxref=GenBank:WP_003902276.1;Name=WP_003902276.1;Ontology_term=GO:0016787;gbkey=CDS;gene=lipQ;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217001.1;locus_tag=AL42_RS18165;product=esterase LipQ;protein_id=WP_003902276.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2781358 2781431 . + . ID=gene-AL42_RS18170;Name=AL42_RS18170;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL42_RS18170;old_locus_tag=AL42_02579 NZ_KK316784.1 tRNAscan-SE tRNA 2781358 2781431 . + . ID=rna-AL42_RS18170;Parent=gene-AL42_RS18170;anticodon=(pos:2781392..2781394);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS18170;product=tRNA-Arg NZ_KK316784.1 tRNAscan-SE exon 2781358 2781431 . + . ID=exon-AL42_RS18170-1;Parent=rna-AL42_RS18170;anticodon=(pos:2781392..2781394);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS18170;product=tRNA-Arg NZ_KK316784.1 RefSeq gene 2781532 2782302 . + . ID=gene-AL42_RS18175;Name=AL42_RS18175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18175;old_locus_tag=AL42_02580 NZ_KK316784.1 Protein Homology CDS 2781532 2782302 . + 0 ID=cds-WP_003412728.1;Parent=gene-AL42_RS18175;Dbxref=GenBank:WP_003412728.1;Name=WP_003412728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217002.1;locus_tag=AL42_RS18175;product=enoyl-CoA hydratase;protein_id=WP_003412728.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2782483 2784567 . - . ID=gene-AL42_RS18180;Name=AL42_RS18180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18180;old_locus_tag=AL42_02581 NZ_KK316784.1 Protein Homology CDS 2782483 2784567 . - 0 ID=cds-WP_003910913.1;Parent=gene-AL42_RS18180;Dbxref=GenBank:WP_003910913.1;Name=WP_003910913.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177886.1;locus_tag=AL42_RS18180;product=PE family protein;protein_id=WP_003910913.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2784649 2787990 . - . ID=gene-AL42_RS18185;Name=AL42_RS18185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18185;old_locus_tag=AL42_02582 NZ_KK316784.1 Protein Homology CDS 2784649 2787990 . - 0 ID=cds-WP_019249816.1;Parent=gene-AL42_RS18185;Dbxref=GenBank:WP_019249816.1;Name=WP_019249816.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015303515.1;locus_tag=AL42_RS18185;product=LuxR family transcriptional regulator;protein_id=WP_019249816.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2788028 2788327 . - . ID=gene-AL42_RS18190;Name=AL42_RS18190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18190;old_locus_tag=AL42_02583 NZ_KK316784.1 Protein Homology CDS 2788028 2788327 . - 0 ID=cds-WP_003899346.1;Parent=gene-AL42_RS18190;Dbxref=GenBank:WP_003899346.1;Name=WP_003899346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217005.1;locus_tag=AL42_RS18190;product=hypothetical protein;protein_id=WP_003899346.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2788436 2793418 . - . ID=gene-AL42_RS18195;Name=AL42_RS18195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18195;old_locus_tag=AL42_02584 NZ_KK316784.1 Protein Homology CDS 2788436 2793418 . - 0 ID=cds-WP_025234875.1;Parent=gene-AL42_RS18195;Dbxref=GenBank:WP_025234875.1;Name=WP_025234875.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177887.1;locus_tag=AL42_RS18195;product=PE family protein;protein_id=WP_025234875.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2793505 2793711 . - . ID=gene-AL42_RS0105205;Name=AL42_RS0105205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0105205 NZ_KK316784.1 Protein Homology CDS 2793505 2793711 . - 0 ID=cds-WP_003899347.1;Parent=gene-AL42_RS0105205;Dbxref=GenBank:WP_003899347.1;Name=WP_003899347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030040.1;locus_tag=AL42_RS0105205;product=hypothetical protein;protein_id=WP_003899347.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2793847 2794470 . + . ID=gene-AL42_RS18200;Name=AL42_RS18200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18200;old_locus_tag=AL42_02585 NZ_KK316784.1 Protein Homology CDS 2793847 2794470 . + 0 ID=cds-WP_003900858.1;Parent=gene-AL42_RS18200;Dbxref=GenBank:WP_003900858.1;Name=WP_003900858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217007.1;locus_tag=AL42_RS18200;product=TIGR00725 family protein;protein_id=WP_003900858.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2794460 2795212 . + . ID=gene-AL42_RS18205;Name=AL42_RS18205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18205;old_locus_tag=AL42_02586 NZ_KK316784.1 Protein Homology CDS 2794460 2795212 . + 0 ID=cds-WP_003901416.1;Parent=gene-AL42_RS18205;Dbxref=GenBank:WP_003901416.1;Name=WP_003901416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217008.1;locus_tag=AL42_RS18205;product=thymidylate synthase family protein;protein_id=WP_003901416.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2795265 2795486 . + . ID=gene-AL42_RS18210;Name=AL42_RS18210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18210;old_locus_tag=AL42_02587 NZ_KK316784.1 Protein Homology CDS 2795265 2795486 . + 0 ID=cds-WP_003412749.1;Parent=gene-AL42_RS18210;Dbxref=GenBank:WP_003412749.1;Name=WP_003412749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217009.1;locus_tag=AL42_RS18210;product=antitoxin;protein_id=WP_003412749.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2795492 2795917 . + . ID=gene-AL42_RS18215;Name=AL42_RS18215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18215;old_locus_tag=AL42_02588 NZ_KK316784.1 Protein Homology CDS 2795492 2795917 . + 0 ID=cds-WP_003905869.1;Parent=gene-AL42_RS18215;Dbxref=GenBank:WP_003905869.1;Name=WP_003905869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217010.1;locus_tag=AL42_RS18215;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003905869.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2795940 2797121 . - . ID=gene-AL42_RS18220;Name=bkdC;gbkey=Gene;gene=bkdC;gene_biotype=protein_coding;locus_tag=AL42_RS18220;old_locus_tag=AL42_02589 NZ_KK316784.1 Protein Homology CDS 2795940 2797121 . - 0 ID=cds-WP_003905870.1;Parent=gene-AL42_RS18220;Dbxref=GenBank:WP_003905870.1;Name=WP_003905870.1;Ontology_term=GO:0016407,GO:0045240;gbkey=CDS;gene=bkdC;go_component=alpha-ketoacid dehydrogenase complex|0045240||IEA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217011.1;locus_tag=AL42_RS18220;product=dihydrolipoamide acetyltransferase family protein;protein_id=WP_003905870.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2797118 2798164 . - . ID=gene-AL42_RS18225;Name=bkdB;gbkey=Gene;gene=bkdB;gene_biotype=protein_coding;locus_tag=AL42_RS18225;old_locus_tag=AL42_02590 NZ_KK316784.1 Protein Homology CDS 2797118 2798164 . - 0 ID=cds-WP_003412757.1;Parent=gene-AL42_RS18225;Dbxref=GenBank:WP_003412757.1;Name=WP_003412757.1;gbkey=CDS;gene=bkdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217012.1;locus_tag=AL42_RS18225;product=3-methyl-2-oxobutanoate dehydrogenase subunit beta;protein_id=WP_003412757.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2798175 2799278 . - . ID=gene-AL42_RS18230;Name=pdhA;gbkey=Gene;gene=pdhA;gene_biotype=protein_coding;locus_tag=AL42_RS18230;old_locus_tag=AL42_02591 NZ_KK316784.1 Protein Homology CDS 2798175 2799278 . - 0 ID=cds-WP_003412761.1;Parent=gene-AL42_RS18230;Dbxref=GenBank:WP_003412761.1;Name=WP_003412761.1;Ontology_term=GO:0006086,GO:0004739,GO:0045254;gbkey=CDS;gene=pdhA;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217013.1;locus_tag=AL42_RS18230;product=pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha;protein_id=WP_003412761.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2799537 2800358 . - . ID=gene-AL42_RS18235;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=AL42_RS18235;old_locus_tag=AL42_02592 NZ_KK316784.1 Protein Homology CDS 2799537 2800358 . - 0 ID=cds-WP_003412766.1;Parent=gene-AL42_RS18235;Dbxref=GenBank:WP_003412766.1;Name=WP_003412766.1;gbkey=CDS;gene=citE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217014.1;locus_tag=AL42_RS18235;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_003412766.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2800355 2800912 . - . ID=gene-AL42_RS18240;Name=AL42_RS18240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18240;old_locus_tag=AL42_02593 NZ_KK316784.1 Protein Homology CDS 2800355 2800912 . - 0 ID=cds-WP_003412768.1;Parent=gene-AL42_RS18240;Dbxref=GenBank:WP_003412768.1;Name=WP_003412768.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217015.1;locus_tag=AL42_RS18240;product=MaoC family dehydratase;protein_id=WP_003412768.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2800909 2802093 . - . ID=gene-AL42_RS18245;Name=AL42_RS18245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18245;old_locus_tag=AL42_02594 NZ_KK316784.1 Protein Homology CDS 2800909 2802093 . - 0 ID=cds-WP_003412771.1;Parent=gene-AL42_RS18245;Dbxref=GenBank:WP_003412771.1;Name=WP_003412771.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217016.1;locus_tag=AL42_RS18245;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003412771.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2802098 2804062 . - . ID=gene-AL42_RS18250;Name=AL42_RS18250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18250;old_locus_tag=AL42_02595 NZ_KK316784.1 Protein Homology CDS 2802098 2804062 . - 0 ID=cds-WP_003899356.1;Parent=gene-AL42_RS18250;Dbxref=GenBank:WP_003899356.1;Name=WP_003899356.1;Ontology_term=GO:0004075,GO:0005524,GO:0016421,GO:0046872;gbkey=CDS;go_function=biotin carboxylase activity|0004075||IEA,ATP binding|0005524||IEA,CoA carboxylase activity|0016421||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217017.1;locus_tag=AL42_RS18250;product=acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha;protein_id=WP_003899356.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2804067 2805656 . - . ID=gene-AL42_RS18255;Name=AL42_RS18255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18255;old_locus_tag=AL42_02596 NZ_KK316784.1 Protein Homology CDS 2804067 2805656 . - 0 ID=cds-WP_003905871.1;Parent=gene-AL42_RS18255;Dbxref=GenBank:WP_003905871.1;Name=WP_003905871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217018.1;locus_tag=AL42_RS18255;product=carboxyl transferase domain-containing protein;protein_id=WP_003905871.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2805653 2806309 . - . ID=gene-AL42_RS18260;Name=scoB;gbkey=Gene;gene=scoB;gene_biotype=protein_coding;locus_tag=AL42_RS18260;old_locus_tag=AL42_02597 NZ_KK316784.1 Protein Homology CDS 2805653 2806309 . - 0 ID=cds-WP_003412782.1;Parent=gene-AL42_RS18260;Dbxref=GenBank:WP_003412782.1;Name=WP_003412782.1;gbkey=CDS;gene=scoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217019.1;locus_tag=AL42_RS18260;product=CoA transferase subunit B;protein_id=WP_003412782.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2806306 2807052 . - . ID=gene-AL42_RS18265;Name=scoA;gbkey=Gene;gene=scoA;gene_biotype=protein_coding;locus_tag=AL42_RS18265;old_locus_tag=AL42_02598 NZ_KK316784.1 Protein Homology CDS 2806306 2807052 . - 0 ID=cds-WP_003412786.1;Parent=gene-AL42_RS18265;Dbxref=GenBank:WP_003412786.1;Name=WP_003412786.1;gbkey=CDS;gene=scoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217020.1;locus_tag=AL42_RS18265;product=CoA transferase subunit A;protein_id=WP_003412786.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2807135 2808778 . - . ID=gene-AL42_RS18270;Name=AL42_RS18270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18270;old_locus_tag=AL42_02599 NZ_KK316784.1 Protein Homology CDS 2807135 2808778 . - 0 ID=cds-WP_003899357.1;Parent=gene-AL42_RS18270;Dbxref=GenBank:WP_003899357.1;Name=WP_003899357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217021.1;locus_tag=AL42_RS18270;product=AMP-binding protein;protein_id=WP_003899357.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2808894 2809541 . + . ID=gene-AL42_RS18275;Name=AL42_RS18275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18275;old_locus_tag=AL42_02600 NZ_KK316784.1 Protein Homology CDS 2808894 2809541 . + 0 ID=cds-WP_003412790.1;Parent=gene-AL42_RS18275;Dbxref=GenBank:WP_003412790.1;Name=WP_003412790.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217022.1;locus_tag=AL42_RS18275;product=SACE_7040 family transcriptional regulator;protein_id=WP_003412790.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2809620 2810441 . + . ID=gene-AL42_RS18280;Name=AL42_RS18280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18280;old_locus_tag=AL42_02601 NZ_KK316784.1 Protein Homology CDS 2809620 2810441 . + 0 ID=cds-WP_003412795.1;Parent=gene-AL42_RS18280;Dbxref=GenBank:WP_003412795.1;Name=WP_003412795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217023.1;locus_tag=AL42_RS18280;product=MmpS family transport accessory protein;protein_id=WP_003412795.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2810438 2811775 . - . ID=gene-AL42_RS18285;Name=AL42_RS18285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18285;old_locus_tag=AL42_02602 NZ_KK316784.1 Protein Homology CDS 2810438 2811775 . - 0 ID=cds-WP_003412798.1;Parent=gene-AL42_RS18285;Dbxref=GenBank:WP_003412798.1;Name=WP_003412798.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217024.1;locus_tag=AL42_RS18285;product=MFS transporter;protein_id=WP_003412798.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2811860 2812666 . + . ID=gene-AL42_RS18290;Name=cmrA;gbkey=Gene;gene=cmrA;gene_biotype=protein_coding;locus_tag=AL42_RS18290;old_locus_tag=AL42_02603 NZ_KK316784.1 Protein Homology CDS 2811860 2812666 . + 0 ID=cds-WP_003412799.1;Parent=gene-AL42_RS18290;Dbxref=GenBank:WP_003412799.1;Name=WP_003412799.1;Note=Catalyzes the final step in mycolic acid biosynthesis.;Ontology_term=GO:0071768;gbkey=CDS;gene=cmrA;go_process=mycolic acid biosynthetic process|0071768||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217025.1;locus_tag=AL42_RS18290;product=mycolate reductase;protein_id=WP_003412799.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2812670 2814271 . - . ID=gene-AL42_RS18295;Name=AL42_RS18295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18295;old_locus_tag=AL42_02604 NZ_KK316784.1 Protein Homology CDS 2812670 2814271 . - 0 ID=cds-WP_003412803.1;Parent=gene-AL42_RS18295;Dbxref=GenBank:WP_003412803.1;Name=WP_003412803.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217026.1;locus_tag=AL42_RS18295;product=helicase HerA-like C-terminal domain-containing protein;protein_id=WP_003412803.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2814339 2814986 . + . ID=gene-AL42_RS18300;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=AL42_RS18300;old_locus_tag=AL42_02605 NZ_KK316784.1 Protein Homology CDS 2814339 2814986 . + 0 ID=cds-WP_003899361.1;Parent=gene-AL42_RS18300;Dbxref=GenBank:WP_003899361.1;Name=WP_003899361.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217027.1;locus_tag=AL42_RS18300;product=oligoribonuclease;protein_id=WP_003899361.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2815036 2815111 . + . ID=gene-AL42_RS18305;Name=AL42_RS18305;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL42_RS18305;old_locus_tag=AL42_02606 NZ_KK316784.1 tRNAscan-SE tRNA 2815036 2815111 . + . ID=rna-AL42_RS18305;Parent=gene-AL42_RS18305;anticodon=(pos:2815069..2815071);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS18305;product=tRNA-His NZ_KK316784.1 tRNAscan-SE exon 2815036 2815111 . + . ID=exon-AL42_RS18305-1;Parent=rna-AL42_RS18305;anticodon=(pos:2815069..2815071);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS18305;product=tRNA-His NZ_KK316784.1 RefSeq gene 2815738 2816985 . - . ID=gene-AL42_RS18310;Name=AL42_RS18310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18310;old_locus_tag=AL42_02607 NZ_KK316784.1 Protein Homology CDS 2815738 2816985 . - 0 ID=cds-WP_003901078.1-2;Parent=gene-AL42_RS18310;Dbxref=GenBank:WP_003901078.1;Name=WP_003901078.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215563.1;locus_tag=AL42_RS18310;product=IS256-like element IS1081 family transposase;protein_id=WP_003901078.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2817343 2817765 . + . ID=gene-AL42_RS18320;Name=AL42_RS18320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18320;old_locus_tag=AL42_02609 NZ_KK316784.1 Protein Homology CDS 2817343 2817765 . + 0 ID=cds-WP_003412921.1;Parent=gene-AL42_RS18320;Dbxref=GenBank:WP_003412921.1;Name=WP_003412921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217029.1;locus_tag=AL42_RS18320;product=hypothetical protein;protein_id=WP_003412921.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2818059 2818520 . - . ID=gene-AL42_RS18325;Name=AL42_RS18325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18325;old_locus_tag=AL42_02610 NZ_KK316784.1 Protein Homology CDS 2818059 2818520 . - 0 ID=cds-WP_003899362.1;Parent=gene-AL42_RS18325;Dbxref=GenBank:WP_003899362.1;Name=WP_003899362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217030.1;locus_tag=AL42_RS18325;product=DUF4411 family protein;protein_id=WP_003899362.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2818526 2819773 . - . ID=gene-AL42_RS18330;Name=AL42_RS18330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18330;old_locus_tag=AL42_02611 NZ_KK316784.1 Protein Homology CDS 2818526 2819773 . - 0 ID=cds-WP_003412926.1;Parent=gene-AL42_RS18330;Dbxref=GenBank:WP_003412926.1;Name=WP_003412926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217031.1;locus_tag=AL42_RS18330;product=XRE family transcriptional regulator;protein_id=WP_003412926.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2819892 2820695 . - . ID=gene-AL42_RS18335;Name=AL42_RS18335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18335;old_locus_tag=AL42_02612 NZ_KK316784.1 Protein Homology CDS 2819892 2820695 . - 0 ID=cds-WP_003901417.1;Parent=gene-AL42_RS18335;Dbxref=GenBank:WP_003901417.1;Name=WP_003901417.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217032.2;locus_tag=AL42_RS18335;product=helix-turn-helix transcriptional regulator;protein_id=WP_003901417.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2820692 2820943 . - . ID=gene-AL42_RS18340;Name=AL42_RS18340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18340;old_locus_tag=AL42_02613 NZ_KK316784.1 Protein Homology CDS 2820692 2820943 . - 0 ID=cds-WP_003412936.1;Parent=gene-AL42_RS18340;Dbxref=GenBank:WP_003412936.1;Name=WP_003412936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217033.1;locus_tag=AL42_RS18340;product=hypothetical protein;protein_id=WP_003412936.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2821291 2822517 . - . ID=gene-AL42_RS18345;Name=ldtMt2;gbkey=Gene;gene=ldtMt2;gene_biotype=protein_coding;locus_tag=AL42_RS18345;old_locus_tag=AL42_02614 NZ_KK316784.1 Protein Homology CDS 2821291 2822517 . - 0 ID=cds-WP_003412938.1;Parent=gene-AL42_RS18345;Dbxref=GenBank:WP_003412938.1;Name=WP_003412938.1;gbkey=CDS;gene=ldtMt2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217034.1;locus_tag=AL42_RS18345;product=L%2CD-transpeptidase LdtMt2;protein_id=WP_003412938.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2822676 2822748 . + . ID=gene-AL42_RS18350;Name=AL42_RS18350;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL42_RS18350;old_locus_tag=AL42_02615 NZ_KK316784.1 tRNAscan-SE tRNA 2822676 2822748 . + . ID=rna-AL42_RS18350;Parent=gene-AL42_RS18350;anticodon=(pos:2822709..2822711);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS18350;product=tRNA-Lys NZ_KK316784.1 tRNAscan-SE exon 2822676 2822748 . + . ID=exon-AL42_RS18350-1;Parent=rna-AL42_RS18350;anticodon=(pos:2822709..2822711);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS18350;product=tRNA-Lys NZ_KK316784.1 RefSeq gene 2822967 2824445 . + . ID=gene-AL42_RS18355;Name=AL42_RS18355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18355;old_locus_tag=AL42_02616 NZ_KK316784.1 Protein Homology CDS 2822967 2824445 . + 0 ID=cds-WP_003910917.1;Parent=gene-AL42_RS18355;Dbxref=GenBank:WP_003910917.1;Name=WP_003910917.1;Ontology_term=GO:0004190;gbkey=CDS;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177888.1;locus_tag=AL42_RS18355;product=PecA family PE domain-processing aspartic protease;protein_id=WP_003910917.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2824570 2824797 . - . ID=gene-AL42_RS18360;Name=AL42_RS18360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18360;old_locus_tag=AL42_02617 NZ_KK316784.1 Protein Homology CDS 2824570 2824797 . - 0 ID=cds-WP_003412942.1;Parent=gene-AL42_RS18360;Dbxref=GenBank:WP_003412942.1;Name=WP_003412942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217036.1;locus_tag=AL42_RS18360;product=DUF3618 domain-containing protein;protein_id=WP_003412942.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2824866 2825339 . + . ID=gene-AL42_RS18365;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=AL42_RS18365;old_locus_tag=AL42_02618 NZ_KK316784.1 Protein Homology CDS 2824866 2825339 . + 0 ID=cds-WP_003412944.1;Parent=gene-AL42_RS18365;Dbxref=GenBank:WP_003412944.1;Name=WP_003412944.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217037.1;locus_tag=AL42_RS18365;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_003412944.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2825311 2826723 . - . ID=gene-AL42_RS18370;Name=AL42_RS18370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18370;old_locus_tag=AL42_02619 NZ_KK316784.1 Protein Homology CDS 2825311 2826723 . - 0 ID=cds-WP_003412946.1;Parent=gene-AL42_RS18370;Dbxref=GenBank:WP_003412946.1;Name=WP_003412946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217038.1;locus_tag=AL42_RS18370;product=dipeptidase;protein_id=WP_003412946.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2826720 2827112 . - . ID=gene-AL42_RS18375;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=AL42_RS18375;old_locus_tag=AL42_02620 NZ_KK316784.1 Protein Homology CDS 2826720 2827112 . - 0 ID=cds-WP_003412952.1;Parent=gene-AL42_RS18375;Dbxref=GenBank:WP_003412952.1;Name=WP_003412952.1;gbkey=CDS;gene=acpS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217039.1;locus_tag=AL42_RS18375;product=holo-ACP synthase AcpS;protein_id=WP_003412952.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2827305 2836514 . - . ID=gene-AL42_RS18380;Name=fas;gbkey=Gene;gene=fas;gene_biotype=protein_coding;locus_tag=AL42_RS18380;old_locus_tag=AL42_02621 NZ_KK316784.1 Protein Homology CDS 2827305 2836514 . - 0 ID=cds-WP_003901420.1;Parent=gene-AL42_RS18380;Dbxref=GenBank:WP_003901420.1;Name=WP_003901420.1;gbkey=CDS;gene=fas;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217040.1;locus_tag=AL42_RS18380;product=fatty acid synthase;protein_id=WP_003901420.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2837034 2837756 . - . ID=gene-AL42_RS18385;Name=AL42_RS18385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18385;old_locus_tag=AL42_02622 NZ_KK316784.1 Protein Homology CDS 2837034 2837756 . - 0 ID=cds-WP_003412957.1;Parent=gene-AL42_RS18385;Dbxref=GenBank:WP_003412957.1;Name=WP_003412957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217041.1;locus_tag=AL42_RS18385;product=DUF1906 domain-containing protein;protein_id=WP_003412957.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2838273 2838495 . + . ID=gene-AL42_RS0105220;Name=AL42_RS0105220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS0105220;old_locus_tag=AL42_02623;pseudo=true NZ_KK316784.1 Protein Homology CDS 2838273 2838495 . + 0 ID=cds-AL42_RS0105220;Parent=gene-AL42_RS0105220;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217042.1;locus_tag=AL42_RS0105220;product=type II toxin-antitoxin system VapB family antitoxin;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 2838492 2838893 . + . ID=gene-AL42_RS18390;Name=AL42_RS18390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18390;old_locus_tag=AL42_02624 NZ_KK316784.1 Protein Homology CDS 2838492 2838893 . + 0 ID=cds-WP_003412963.1;Parent=gene-AL42_RS18390;Dbxref=GenBank:WP_003412963.1;Name=WP_003412963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217043.1;locus_tag=AL42_RS18390;product=PIN domain-containing protein;protein_id=WP_003412963.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2838928 2839848 . - . ID=gene-AL42_RS18395;Name=mrr;gbkey=Gene;gene=mrr;gene_biotype=protein_coding;locus_tag=AL42_RS18395;old_locus_tag=AL42_02625 NZ_KK316784.1 Protein Homology CDS 2838928 2839848 . - 0 ID=cds-WP_003412965.1;Parent=gene-AL42_RS18395;Dbxref=GenBank:WP_003412965.1;Name=WP_003412965.1;Ontology_term=GO:0009307,GO:0003677,GO:0004519;gbkey=CDS;gene=mrr;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217044.1;locus_tag=AL42_RS18395;product=restriction endonuclease;protein_id=WP_003412965.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2840189 2840434 . - . ID=gene-AL42_RS27250;Name=AL42_RS27250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27250 NZ_KK316784.1 Protein Homology CDS 2840189 2840434 . - 0 ID=cds-WP_071854223.1;Parent=gene-AL42_RS27250;Dbxref=GenBank:WP_071854223.1;Name=WP_071854223.1;Ontology_term=GO:0001558,GO:0003677,GO:0003700,GO:0097351;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of cell growth|0001558||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014588586.1;locus_tag=AL42_RS27250;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=WP_071854223.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2840493 2841443 . + . ID=gene-AL42_RS18400;Name=AL42_RS18400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18400;old_locus_tag=AL42_02626 NZ_KK316784.1 Protein Homology CDS 2840493 2841443 . + 0 ID=cds-WP_003911916.1;Parent=gene-AL42_RS18400;Dbxref=GenBank:WP_003911916.1;Name=WP_003911916.1;Ontology_term=GO:0003677,GO:0004518;gbkey=CDS;go_function=DNA binding|0003677||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019830685.1;locus_tag=AL42_RS18400;product=ERCC4 domain-containing protein;protein_id=WP_003911916.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2841444 2841863 . - . ID=gene-AL42_RS18405;Name=AL42_RS18405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18405;old_locus_tag=AL42_02627 NZ_KK316784.1 Protein Homology CDS 2841444 2841863 . - 0 ID=cds-WP_003412970.1;Parent=gene-AL42_RS18405;Dbxref=GenBank:WP_003412970.1;Name=WP_003412970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217046.1;locus_tag=AL42_RS18405;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003412970.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2841860 2842084 . - . ID=gene-AL42_RS18410;Name=AL42_RS18410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18410;old_locus_tag=AL42_02628 NZ_KK316784.1 Protein Homology CDS 2841860 2842084 . - 0 ID=cds-WP_003412975.1;Parent=gene-AL42_RS18410;Dbxref=GenBank:WP_003412975.1;Name=WP_003412975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177672.1;locus_tag=AL42_RS18410;product=antitoxin VapB39;protein_id=WP_003412975.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2842115 2844958 . - . ID=gene-AL42_RS18415;Name=AL42_RS18415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18415;old_locus_tag=AL42_02629 NZ_KK316784.1 Protein Homology CDS 2842115 2844958 . - 0 ID=cds-WP_003899363.1;Parent=gene-AL42_RS18415;Dbxref=GenBank:WP_003899363.1;Name=WP_003899363.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177889.1;locus_tag=AL42_RS18415;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_003899363.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2845030 2845431 . - . ID=gene-AL42_RS18420;Name=AL42_RS18420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18420;old_locus_tag=AL42_02630 NZ_KK316784.1 Protein Homology CDS 2845030 2845431 . - 0 ID=cds-WP_003412981.1;Parent=gene-AL42_RS18420;Dbxref=GenBank:WP_003412981.1;Name=WP_003412981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217048.1;locus_tag=AL42_RS18420;product=hypothetical protein;protein_id=WP_003412981.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2845431 2845901 . - . ID=gene-AL42_RS18425;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=AL42_RS18425;old_locus_tag=AL42_02631 NZ_KK316784.1 Protein Homology CDS 2845431 2845901 . - 0 ID=cds-WP_003899364.1;Parent=gene-AL42_RS18425;Dbxref=GenBank:WP_003899364.1;Name=WP_003899364.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217049.1;locus_tag=AL42_RS18425;product=transcription antitermination factor NusB;protein_id=WP_003899364.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2845904 2846467 . - . ID=gene-AL42_RS18430;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=AL42_RS18430;old_locus_tag=AL42_02632 NZ_KK316784.1 Protein Homology CDS 2845904 2846467 . - 0 ID=cds-WP_003412989.1;Parent=gene-AL42_RS18430;Dbxref=GenBank:WP_003412989.1;Name=WP_003412989.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011559756.1;locus_tag=AL42_RS18430;product=elongation factor P;protein_id=WP_003412989.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2846477 2847595 . - . ID=gene-AL42_RS18435;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=AL42_RS18435;old_locus_tag=AL42_02633 NZ_KK316784.1 Protein Homology CDS 2846477 2847595 . - 0 ID=cds-WP_003412996.1;Parent=gene-AL42_RS18435;Dbxref=GenBank:WP_003412996.1;Name=WP_003412996.1;Ontology_term=GO:0006508,GO:0004177,GO:0008233,GO:0016787,GO:0046872,GO:0070006;gbkey=CDS;gene=pepQ;go_function=aminopeptidase activity|0004177||IEA,peptidase activity|0008233||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217051.1;locus_tag=AL42_RS18435;product=M24 family metallopeptidase;protein_id=WP_003412996.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2847629 2848321 . + . ID=gene-AL42_RS18440;Name=AL42_RS18440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18440;old_locus_tag=AL42_02634 NZ_KK316784.1 Protein Homology CDS 2847629 2848321 . + 0 ID=cds-WP_003412998.1;Parent=gene-AL42_RS18440;Dbxref=GenBank:WP_003412998.1;Name=WP_003412998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217052.1;locus_tag=AL42_RS18440;product=B-4DMT family transporter;protein_id=WP_003412998.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2848325 2848768 . - . ID=gene-AL42_RS18445;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=AL42_RS18445;old_locus_tag=AL42_02635 NZ_KK316784.1 Protein Homology CDS 2848325 2848768 . - 0 ID=cds-WP_003413001.1;Parent=gene-AL42_RS18445;Dbxref=GenBank:WP_003413001.1;Name=WP_003413001.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217053.1;locus_tag=AL42_RS18445;product=type II 3-dehydroquinate dehydratase;protein_id=WP_003413001.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2848765 2849853 . - . ID=gene-AL42_RS18450;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=AL42_RS18450;old_locus_tag=AL42_02636 NZ_KK316784.1 Protein Homology CDS 2848765 2849853 . - 0 ID=cds-WP_003413008.1;Parent=gene-AL42_RS18450;Dbxref=GenBank:WP_003413008.1;Name=WP_003413008.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217054.1;locus_tag=AL42_RS18450;product=3-dehydroquinate synthase;protein_id=WP_003413008.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2849850 2850380 . - . ID=gene-AL42_RS18455;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=AL42_RS18455;old_locus_tag=AL42_02637 NZ_KK316784.1 Protein Homology CDS 2849850 2850380 . - 0 ID=cds-WP_003413021.1;Parent=gene-AL42_RS18455;Dbxref=GenBank:WP_003413021.1;Name=WP_003413021.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217055.1;locus_tag=AL42_RS18455;product=shikimate kinase AroK;protein_id=WP_003413021.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2850384 2851589 . - . ID=gene-AL42_RS18460;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=AL42_RS18460;old_locus_tag=AL42_02638 NZ_KK316784.1 Protein Homology CDS 2850384 2851589 . - 0 ID=cds-WP_003413027.1;Parent=gene-AL42_RS18460;Dbxref=GenBank:WP_003413027.1;Name=WP_003413027.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217056.1;locus_tag=AL42_RS18460;product=chorismate synthase;protein_id=WP_003413027.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2851697 2852011 . + . ID=gene-AL42_RS0105225;Name=AL42_RS0105225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0105225;old_locus_tag=AL42_02639 NZ_KK316784.1 Protein Homology CDS 2851697 2852011 . + 0 ID=cds-WP_009937839.1;Parent=gene-AL42_RS0105225;Dbxref=GenBank:WP_009937839.1;Name=WP_009937839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015293767.1;locus_tag=AL42_RS0105225;product=hypothetical protein;protein_id=WP_009937839.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2852307 2853518 . + . ID=gene-AL42_RS18465;Name=AL42_RS18465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18465;old_locus_tag=AL42_02640 NZ_KK316784.1 Protein Homology CDS 2852307 2853518 . + 0 ID=cds-WP_003900845.1;Parent=gene-AL42_RS18465;Dbxref=GenBank:WP_003900845.1;Name=WP_003900845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217058.1;locus_tag=AL42_RS18465;product=alpha/beta hydrolase family protein;protein_id=WP_003900845.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2853645 2854308 . + . ID=gene-AL42_RS0105235;Name=AL42_RS0105235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS0105235;pseudo=true NZ_KK316784.1 Protein Homology CDS 2853645 2854308 . + 0 ID=cds-AL42_RS0105235;Parent=gene-AL42_RS0105235;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217060.1;locus_tag=AL42_RS0105235;product=LppA family lipoprotein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2854305 2854582 . + . ID=gene-AL42_RS26915;Name=AL42_RS26915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS26915;old_locus_tag=AL42_02642;pseudo=true NZ_KK316784.1 Protein Homology CDS 2854305 2854582 . + 0 ID=cds-AL42_RS26915;Parent=gene-AL42_RS26915;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217061.1;locus_tag=AL42_RS26915;product=type II toxin-antitoxin system VapB family antitoxin;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 2854675 2855088 . + . ID=gene-AL42_RS18470;Name=AL42_RS18470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18470;old_locus_tag=AL42_02643 NZ_KK316784.1 Protein Homology CDS 2854675 2855088 . + 0 ID=cds-WP_003413164.1;Parent=gene-AL42_RS18470;Dbxref=GenBank:WP_003413164.1;Name=WP_003413164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217062.1;locus_tag=AL42_RS18470;product=PIN domain nuclease;protein_id=WP_003413164.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2855127 2855384 . + . ID=gene-AL42_RS18475;Name=AL42_RS18475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18475;old_locus_tag=AL42_02644 NZ_KK316784.1 Protein Homology CDS 2855127 2855384 . + 0 ID=cds-WP_003413167.1;Parent=gene-AL42_RS18475;Dbxref=GenBank:WP_003413167.1;Name=WP_003413167.1;Ontology_term=GO:0006276,GO:0006355,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_process=plasmid maintenance|0006276||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217063.1;locus_tag=AL42_RS18475;product=ribbon-helix-helix domain-containing protein;protein_id=WP_003413167.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2855381 2855758 . + . ID=gene-AL42_RS18480;Name=AL42_RS18480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18480;old_locus_tag=AL42_02645 NZ_KK316784.1 Protein Homology CDS 2855381 2855758 . + 0 ID=cds-WP_003413174.1;Parent=gene-AL42_RS18480;Dbxref=GenBank:WP_003413174.1;Name=WP_003413174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217064.1;locus_tag=AL42_RS18480;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003413174.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2855774 2856148 . - . ID=gene-AL42_RS18485;Name=AL42_RS18485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18485;old_locus_tag=AL42_02646 NZ_KK316784.1 Protein Homology CDS 2855774 2856148 . - 0 ID=cds-WP_003413177.1;Parent=gene-AL42_RS18485;Dbxref=GenBank:WP_003413177.1;Name=WP_003413177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004837057.1;locus_tag=AL42_RS18485;product=hypothetical protein;protein_id=WP_003413177.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2856248 2856643 . - . ID=gene-AL42_RS18490;Name=vapC20;gbkey=Gene;gene=vapC20;gene_biotype=protein_coding;locus_tag=AL42_RS18490;old_locus_tag=AL42_02647 NZ_KK316784.1 Protein Homology CDS 2856248 2856643 . - 0 ID=cds-WP_003413180.1;Parent=gene-AL42_RS18490;Dbxref=GenBank:WP_003413180.1;Name=WP_003413180.1;gbkey=CDS;gene=vapC20;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217065.1;locus_tag=AL42_RS18490;product=type II toxin-antitoxin system toxin 23S rRNA-specific endonuclease VapC20;protein_id=WP_003413180.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2856640 2856885 . - . ID=gene-AL42_RS18495;Name=vapB20;gbkey=Gene;gene=vapB20;gene_biotype=protein_coding;locus_tag=AL42_RS18495;old_locus_tag=AL42_02648 NZ_KK316784.1 Protein Homology CDS 2856640 2856885 . - 0 ID=cds-WP_003413183.1;Parent=gene-AL42_RS18495;Dbxref=GenBank:WP_003413183.1;Name=WP_003413183.1;gbkey=CDS;gene=vapB20;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217066.1;locus_tag=AL42_RS18495;product=type II toxin-antitoxin system antitoxin VapB20;protein_id=WP_003413183.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2857296 2857715 . - . ID=gene-AL42_RS18500;Name=AL42_RS18500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18500;old_locus_tag=AL42_02649 NZ_KK316784.1 Protein Homology CDS 2857296 2857715 . - 0 ID=cds-WP_003413190.1;Parent=gene-AL42_RS18500;Dbxref=GenBank:WP_003413190.1;Name=WP_003413190.1;Ontology_term=GO:0004190,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217067.1;locus_tag=AL42_RS18500;product=A24 family peptidase;protein_id=WP_003413190.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2857727 2858536 . - . ID=gene-AL42_RS18505;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=AL42_RS18505;old_locus_tag=AL42_02650 NZ_KK316784.1 Protein Homology CDS 2857727 2858536 . - 0 ID=cds-WP_003413193.1;Parent=gene-AL42_RS18505;Dbxref=GenBank:WP_003413193.1;Name=WP_003413193.1;Ontology_term=GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217068.1;locus_tag=AL42_RS18505;product=shikimate dehydrogenase;protein_id=WP_003413193.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2858533 2859786 . - . ID=gene-AL42_RS18510;Name=AL42_RS18510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18510;old_locus_tag=AL42_02651 NZ_KK316784.1 Protein Homology CDS 2858533 2859786 . - 0 ID=cds-WP_003413196.1;Parent=gene-AL42_RS18510;Dbxref=GenBank:WP_003413196.1;Name=WP_003413196.1;Ontology_term=GO:0009252,GO:0071555,GO:0008932,GO:0016829;gbkey=CDS;go_function=lytic endotransglycosylase activity|0008932||IEA,lyase activity|0016829||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217069.1;locus_tag=AL42_RS18510;product=endolytic transglycosylase MltG;protein_id=WP_003413196.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2859779 2860291 . - . ID=gene-AL42_RS18515;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=AL42_RS18515;old_locus_tag=AL42_02652 NZ_KK316784.1 Protein Homology CDS 2859779 2860291 . - 0 ID=cds-WP_003413197.1;Parent=gene-AL42_RS18515;Dbxref=GenBank:WP_003413197.1;Name=WP_003413197.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217070.1;locus_tag=AL42_RS18515;product=Holliday junction resolvase RuvX;protein_id=WP_003413197.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2860292 2863006 . - . ID=gene-AL42_RS18520;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=AL42_RS18520;old_locus_tag=AL42_02653 NZ_KK316784.1 Protein Homology CDS 2860292 2863006 . - 0 ID=cds-WP_003902305.1;Parent=gene-AL42_RS18520;Dbxref=GenBank:WP_003902305.1;Name=WP_003902305.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217071.1;locus_tag=AL42_RS18520;product=alanine--tRNA ligase;protein_id=WP_003902305.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2863097 2863486 . - . ID=gene-AL42_RS18525;Name=AL42_RS18525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18525;old_locus_tag=AL42_02654 NZ_KK316784.1 Protein Homology CDS 2863097 2863486 . - 0 ID=cds-WP_003413208.1;Parent=gene-AL42_RS18525;Dbxref=GenBank:WP_003413208.1;Name=WP_003413208.1;Ontology_term=GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217072.1;locus_tag=AL42_RS18525;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WP_003413208.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2863647 2864267 . + . ID=gene-AL42_RS18530;Name=AL42_RS18530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18530;old_locus_tag=AL42_02655 NZ_KK316784.1 Protein Homology CDS 2863647 2864267 . + 0 ID=cds-WP_003918465.1;Parent=gene-AL42_RS18530;Dbxref=GenBank:WP_003918465.1;Name=WP_003918465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015355845.1;locus_tag=AL42_RS18530;product=antibiotic biosynthesis monooxygenase;protein_id=WP_003918465.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2864439 2865062 . + . ID=gene-AL42_RS18535;Name=AL42_RS18535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18535;old_locus_tag=AL42_02656 NZ_KK316784.1 Protein Homology CDS 2864439 2865062 . + 0 ID=cds-WP_003917020.1;Parent=gene-AL42_RS18535;Dbxref=GenBank:WP_003917020.1;Name=WP_003917020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015355845.1;locus_tag=AL42_RS18535;product=hypothetical protein;protein_id=WP_003917020.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2865092 2866450 . - . ID=gene-AL42_RS18540;Name=AL42_RS18540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18540;old_locus_tag=AL42_02657 NZ_KK316784.1 Protein Homology CDS 2865092 2866450 . - 0 ID=cds-WP_003899376.1;Parent=gene-AL42_RS18540;Dbxref=GenBank:WP_003899376.1;Name=WP_003899376.1;Ontology_term=GO:0006260,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217075.1;locus_tag=AL42_RS18540;product=replication-associated recombination protein A;protein_id=WP_003899376.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2866596 2867573 . + . ID=gene-AL42_RS18545;Name=AL42_RS18545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18545;old_locus_tag=AL42_02658 NZ_KK316784.1 Protein Homology CDS 2866596 2867573 . + 0 ID=cds-WP_003899377.1;Parent=gene-AL42_RS18545;Dbxref=GenBank:WP_003899377.1;Name=WP_003899377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217076.1;locus_tag=AL42_RS18545;product=DUF2189 domain-containing protein;protein_id=WP_003899377.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2867930 2868667 . + . ID=gene-AL42_RS0105245;Name=AL42_RS0105245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0105245 NZ_KK316784.1 Protein Homology CDS 2867930 2868667 . + 0 ID=cds-WP_003910921.1;Parent=gene-AL42_RS0105245;Dbxref=GenBank:WP_003910921.1;Name=WP_003910921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010950737.1;locus_tag=AL42_RS0105245;product=DUF2652 domain-containing protein;protein_id=WP_003910921.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2868810 2869859 . + . ID=gene-AL42_RS18550;Name=AL42_RS18550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18550;old_locus_tag=AL42_02661 NZ_KK316784.1 Protein Homology CDS 2868810 2869859 . + 0 ID=cds-WP_003413230.1;Parent=gene-AL42_RS18550;Dbxref=GenBank:WP_003413230.1;Name=WP_003413230.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217079.1;locus_tag=AL42_RS18550;product=ABC transporter permease;protein_id=WP_003413230.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2869862 2870854 . + . ID=gene-AL42_RS18555;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=AL42_RS18555;old_locus_tag=AL42_02662 NZ_KK316784.1 Protein Homology CDS 2869862 2870854 . + 0 ID=cds-WP_003901426.1;Parent=gene-AL42_RS18555;Dbxref=GenBank:WP_003901426.1;Name=WP_003901426.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;gene=glnQ;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217080.1;locus_tag=AL42_RS18555;product=ABC transporter ATP-binding protein;protein_id=WP_003901426.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2871131 2872882 . + . ID=gene-AL42_RS18560;Name=AL42_RS18560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18560;old_locus_tag=AL42_02663 NZ_KK316784.1 Protein Homology CDS 2871131 2872882 . + 0 ID=cds-WP_003901427.1;Parent=gene-AL42_RS18560;Dbxref=GenBank:WP_003901427.1;Name=WP_003901427.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217081.1;locus_tag=AL42_RS18560;product=patatin-like phospholipase family protein;protein_id=WP_003901427.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2872974 2876315 . + . ID=gene-AL42_RS18565;Name=AL42_RS18565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18565;old_locus_tag=AL42_02664 NZ_KK316784.1 Protein Homology CDS 2872974 2876315 . + 0 ID=cds-WP_003913357.1;Parent=gene-AL42_RS18565;Dbxref=GenBank:WP_003913357.1;Name=WP_003913357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015293785.1;locus_tag=AL42_RS18565;product=transglutaminase family protein;protein_id=WP_003913357.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2876315 2878969 . + . ID=gene-AL42_RS18570;Name=AL42_RS18570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18570;old_locus_tag=AL42_02665 NZ_KK316784.1 Protein Homology CDS 2876315 2878969 . + 0 ID=cds-WP_003413330.1;Parent=gene-AL42_RS18570;Dbxref=GenBank:WP_003413330.1;Name=WP_003413330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217083.1;locus_tag=AL42_RS18570;product=circularly permuted type 2 ATP-grasp protein;protein_id=WP_003413330.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2878966 2879991 . - . ID=gene-AL42_RS18575;Name=AL42_RS18575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18575;old_locus_tag=AL42_02666 NZ_KK316784.1 Protein Homology CDS 2878966 2879991 . - 0 ID=cds-WP_003413332.1;Parent=gene-AL42_RS18575;Dbxref=GenBank:WP_003413332.1;Name=WP_003413332.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217084.1;locus_tag=AL42_RS18575;product=zinc-binding metallopeptidase family protein;protein_id=WP_003413332.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2879984 2880928 . - . ID=gene-AL42_RS18580;Name=AL42_RS18580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18580;old_locus_tag=AL42_02667 NZ_KK316784.1 Protein Homology CDS 2879984 2880928 . - 0 ID=cds-WP_003413334.1;Parent=gene-AL42_RS18580;Dbxref=GenBank:WP_003413334.1;Name=WP_003413334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217085.1;locus_tag=AL42_RS18580;product=transglutaminase family protein;protein_id=WP_003413334.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2881032 2881421 . + . ID=gene-AL42_RS18585;Name=AL42_RS18585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18585;old_locus_tag=AL42_02668 NZ_KK316784.1 Protein Homology CDS 2881032 2881421 . + 0 ID=cds-WP_003413336.1;Parent=gene-AL42_RS18585;Dbxref=GenBank:WP_003413336.1;Name=WP_003413336.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217086.1;locus_tag=AL42_RS18585;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_003413336.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2881413 2882480 . - . ID=gene-AL42_RS18590;Name=AL42_RS18590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18590;old_locus_tag=AL42_02669 NZ_KK316784.1 Protein Homology CDS 2881413 2882480 . - 0 ID=cds-WP_003899381.1;Parent=gene-AL42_RS18590;Dbxref=GenBank:WP_003899381.1;Name=WP_003899381.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217087.1;locus_tag=AL42_RS18590;product=FUSC family protein;protein_id=WP_003899381.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2882533 2884323 . - . ID=gene-AL42_RS18595;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=AL42_RS18595;old_locus_tag=AL42_02670 NZ_KK316784.1 Protein Homology CDS 2882533 2884323 . - 0 ID=cds-WP_003899382.1;Parent=gene-AL42_RS18595;Dbxref=GenBank:WP_003899382.1;Name=WP_003899382.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217088.1;locus_tag=AL42_RS18595;product=aspartate--tRNA ligase;protein_id=WP_003899382.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2884416 2885303 . + . ID=gene-AL42_RS18600;Name=AL42_RS18600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18600;old_locus_tag=AL42_02671 NZ_KK316784.1 Protein Homology CDS 2884416 2885303 . + 0 ID=cds-WP_015385292.1;Parent=gene-AL42_RS18600;Dbxref=GenBank:WP_015385292.1;Name=WP_015385292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015385292.1;locus_tag=AL42_RS18600;product=oxidoreductase;protein_id=WP_015385292.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2885326 2885829 . + . ID=gene-AL42_RS18605;Name=AL42_RS18605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18605;old_locus_tag=AL42_02672 NZ_KK316784.1 Protein Homology CDS 2885326 2885829 . + 0 ID=cds-WP_003413345.1;Parent=gene-AL42_RS18605;Dbxref=GenBank:WP_003413345.1;Name=WP_003413345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217090.1;locus_tag=AL42_RS18605;product=SRPBCC family protein;protein_id=WP_003413345.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2885859 2886740 . + . ID=gene-AL42_RS18610;Name=ypfJ;gbkey=Gene;gene=ypfJ;gene_biotype=protein_coding;locus_tag=AL42_RS18610;old_locus_tag=AL42_02673 NZ_KK316784.1 Protein Homology CDS 2885859 2886740 . + 0 ID=cds-WP_003899384.1;Parent=gene-AL42_RS18610;Dbxref=GenBank:WP_003899384.1;Name=WP_003899384.1;gbkey=CDS;gene=ypfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217091.1;locus_tag=AL42_RS18610;product=KPN_02809 family neutral zinc metallopeptidase;protein_id=WP_003899384.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2886746 2887210 . - . ID=gene-AL42_RS18615;Name=AL42_RS18615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18615;old_locus_tag=AL42_02674 NZ_KK316784.1 Protein Homology CDS 2886746 2887210 . - 0 ID=cds-WP_003413352.1;Parent=gene-AL42_RS18615;Dbxref=GenBank:WP_003413352.1;Name=WP_003413352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217092.1;locus_tag=AL42_RS18615;product=membrane protein;protein_id=WP_003413352.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2887438 2889027 . + . ID=gene-AL42_RS18620;Name=AL42_RS18620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18620;old_locus_tag=AL42_02675 NZ_KK316784.1 Protein Homology CDS 2887438 2889027 . + 0 ID=cds-WP_003413355.1;Parent=gene-AL42_RS18620;Dbxref=GenBank:WP_003413355.1;Name=WP_003413355.1;Ontology_term=GO:0016311,GO:0003993,GO:0046872;gbkey=CDS;go_function=acid phosphatase activity|0003993||IEA,metal ion binding|0046872||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217093.1;locus_tag=AL42_RS18620;product=purple acid phosphatase family protein;protein_id=WP_003413355.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2889029 2890051 . - . ID=gene-AL42_RS18625;Name=AL42_RS18625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18625;old_locus_tag=AL42_02676 NZ_KK316784.1 Protein Homology CDS 2889029 2890051 . - 0 ID=cds-WP_003413359.1;Parent=gene-AL42_RS18625;Dbxref=GenBank:WP_003413359.1;Name=WP_003413359.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217094.1;locus_tag=AL42_RS18625;product=Rv2578c family radical SAM protein;protein_id=WP_003413359.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2890159 2891061 . + . ID=gene-AL42_RS18630;Name=dhaA;gbkey=Gene;gene=dhaA;gene_biotype=protein_coding;locus_tag=AL42_RS18630;old_locus_tag=AL42_02677 NZ_KK316784.1 Protein Homology CDS 2890159 2891061 . + 0 ID=cds-WP_003413363.1;Parent=gene-AL42_RS18630;Dbxref=GenBank:WP_003413363.1;Name=WP_003413363.1;Ontology_term=GO:0018786;gbkey=CDS;gene=dhaA;go_function=haloalkane dehalogenase activity|0018786||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177890.1;locus_tag=AL42_RS18630;product=haloalkane dehalogenase;protein_id=WP_003413363.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2891341 2892612 . - . ID=gene-AL42_RS18635;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=AL42_RS18635;old_locus_tag=AL42_02678 NZ_KK316784.1 Protein Homology CDS 2891341 2892612 . - 0 ID=cds-WP_003413365.1;Parent=gene-AL42_RS18635;Dbxref=GenBank:WP_003413365.1;Name=WP_003413365.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217096.1;locus_tag=AL42_RS18635;product=histidine--tRNA ligase;protein_id=WP_003413365.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2892609 2893283 . - . ID=gene-AL42_RS18640;Name=AL42_RS18640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18640;old_locus_tag=AL42_02679 NZ_KK316784.1 Protein Homology CDS 2892609 2893283 . - 0 ID=cds-WP_003413366.1;Parent=gene-AL42_RS18640;Dbxref=GenBank:WP_003413366.1;Name=WP_003413366.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217097.1;locus_tag=AL42_RS18640;product=MBL fold metallo-hydrolase;protein_id=WP_003413366.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2893382 2894260 . + . ID=gene-AL42_RS18645;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=AL42_RS18645;old_locus_tag=AL42_02680 NZ_KK316784.1 Protein Homology CDS 2893382 2894260 . + 0 ID=cds-WP_003917032.1;Parent=gene-AL42_RS18645;Dbxref=GenBank:WP_003917032.1;Name=WP_003917032.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917032.1;locus_tag=AL42_RS18645;product=peptidylprolyl isomerase PpiB;protein_id=WP_003917032.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2894346 2896718 . - . ID=gene-AL42_RS18650;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=AL42_RS18650;old_locus_tag=AL42_02681 NZ_KK316784.1 Protein Homology CDS 2894346 2896718 . - 0 ID=cds-WP_003413368.1;Parent=gene-AL42_RS18650;Dbxref=GenBank:WP_003413368.1;Name=WP_003413368.1;Ontology_term=GO:0015970,GO:0008728,GO:0008893;gbkey=CDS;gene=relA;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate biosynthetic process|0015970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217099.1;locus_tag=AL42_RS18650;product=RelA/SpoT family protein;protein_id=WP_003413368.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2896749 2897420 . - . ID=gene-AL42_RS0105250;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=AL42_RS0105250;old_locus_tag=AL42_02682 NZ_KK316784.1 Protein Homology CDS 2896749 2897420 . - 0 ID=cds-WP_003413369.1;Parent=gene-AL42_RS0105250;Dbxref=GenBank:WP_003413369.1;Name=WP_003413369.1;Ontology_term=GO:0009116,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217100.1;locus_tag=AL42_RS0105250;product=adenine phosphoribosyltransferase;protein_id=WP_003413369.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2897524 2899197 . - . ID=gene-AL42_RS18655;Name=AL42_RS18655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18655;old_locus_tag=AL42_02683 NZ_KK316784.1 Protein Homology CDS 2897524 2899197 . - 0 ID=cds-WP_003413373.1;Parent=gene-AL42_RS18655;Dbxref=GenBank:WP_003413373.1;Name=WP_003413373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217101.1;locus_tag=AL42_RS18655;product=ABC transporter substrate-binding protein;protein_id=WP_003413373.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2899203 2900531 . - . ID=gene-AL42_RS18660;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=AL42_RS18660;old_locus_tag=AL42_02684 NZ_KK316784.1 Protein Homology CDS 2899203 2900531 . - 0 ID=cds-WP_003899387.1;Parent=gene-AL42_RS18660;Dbxref=GenBank:WP_003899387.1;Name=WP_003899387.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217102.1;locus_tag=AL42_RS18660;product=protein translocase subunit SecF;protein_id=WP_003899387.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2900535 2902256 . - . ID=gene-AL42_RS18665;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=AL42_RS18665;old_locus_tag=AL42_02685 NZ_KK316784.1 Protein Homology CDS 2900535 2902256 . - 0 ID=cds-WP_003413385.1;Parent=gene-AL42_RS18665;Dbxref=GenBank:WP_003413385.1;Name=WP_003413385.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217103.1;locus_tag=AL42_RS18665;product=protein translocase subunit SecD;protein_id=WP_003413385.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2902366 2902713 . - . ID=gene-AL42_RS18670;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=AL42_RS18670;old_locus_tag=AL42_02686 NZ_KK316784.1 Protein Homology CDS 2902366 2902713 . - 0 ID=cds-WP_003413391.1;Parent=gene-AL42_RS18670;Dbxref=GenBank:WP_003413391.1;Name=WP_003413391.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217104.1;locus_tag=AL42_RS18670;product=preprotein translocase subunit YajC;protein_id=WP_003413391.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2902880 2904229 . + . ID=gene-AL42_RS18675;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=protein_coding;locus_tag=AL42_RS18675;old_locus_tag=AL42_02687 NZ_KK316784.1 Protein Homology CDS 2902880 2904229 . + 0 ID=cds-WP_003413395.1;Parent=gene-AL42_RS18675;Dbxref=GenBank:WP_003413395.1;Name=WP_003413395.1;Ontology_term=GO:0009448,GO:0030170;gbkey=CDS;gene=gabT;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217105.1;locus_tag=AL42_RS18675;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=WP_003413395.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2904391 2907897 . + . ID=gene-AL42_RS18680;Name=car;gbkey=Gene;gene=car;gene_biotype=protein_coding;locus_tag=AL42_RS18680;old_locus_tag=AL42_02688 NZ_KK316784.1 Protein Homology CDS 2904391 2907897 . + 0 ID=cds-WP_003413409.1;Parent=gene-AL42_RS18680;Dbxref=GenBank:WP_003413409.1;Name=WP_003413409.1;Ontology_term=GO:0006629,GO:0005524,GO:0016620,GO:0031177,GO:0050661;gbkey=CDS;gene=car;go_function=ATP binding|0005524||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,phosphopantetheine binding|0031177||IEA,NADP binding|0050661||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217106.1;locus_tag=AL42_RS18680;product=carboxylic acid reductase;protein_id=WP_003413409.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2908071 2909702 . + . ID=gene-AL42_RS18685;Name=AL42_RS18685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18685;old_locus_tag=AL42_02689 NZ_KK316784.1 Protein Homology CDS 2908071 2909702 . + 0 ID=cds-WP_009940036.1;Parent=gene-AL42_RS18685;Dbxref=GenBank:WP_009940036.1;Name=WP_009940036.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177891.1;locus_tag=AL42_RS18685;product=PE family protein;protein_id=WP_009940036.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2909719 2910753 . - . ID=gene-AL42_RS18690;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=AL42_RS18690;old_locus_tag=AL42_02690 NZ_KK316784.1 Protein Homology CDS 2909719 2910753 . - 0 ID=cds-WP_003413416.1;Parent=gene-AL42_RS18690;Dbxref=GenBank:WP_003413416.1;Name=WP_003413416.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217108.1;locus_tag=AL42_RS18690;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_003413416.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2910750 2911340 . - . ID=gene-AL42_RS18695;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=AL42_RS18695;old_locus_tag=AL42_02691 NZ_KK316784.1 Protein Homology CDS 2910750 2911340 . - 0 ID=cds-WP_003413421.1;Parent=gene-AL42_RS18695;Dbxref=GenBank:WP_003413421.1;Name=WP_003413421.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217109.1;locus_tag=AL42_RS18695;product=Holliday junction branch migration protein RuvA;protein_id=WP_003413421.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2911337 2911903 . - . ID=gene-AL42_RS18700;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=AL42_RS18700;old_locus_tag=AL42_02692 NZ_KK316784.1 Protein Homology CDS 2911337 2911903 . - 0 ID=cds-WP_003413426.1;Parent=gene-AL42_RS18700;Dbxref=GenBank:WP_003413426.1;Name=WP_003413426.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217110.1;locus_tag=AL42_RS18700;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_003413426.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2912012 2912257 . + . ID=gene-AL42_RS18705;Name=AL42_RS18705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18705;old_locus_tag=AL42_02693 NZ_KK316784.1 Protein Homology CDS 2912012 2912257 . + 0 ID=cds-WP_003413429.1;Parent=gene-AL42_RS18705;Dbxref=GenBank:WP_003413429.1;Name=WP_003413429.1;Ontology_term=GO:0001558,GO:0003677,GO:0003700,GO:0097351;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of cell growth|0001558||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217111.1;locus_tag=AL42_RS18705;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=WP_003413429.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2912254 2912658 . + . ID=gene-AL42_RS18710;Name=AL42_RS18710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18710;old_locus_tag=AL42_02694 NZ_KK316784.1 Protein Homology CDS 2912254 2912658 . + 0 ID=cds-WP_003413432.1;Parent=gene-AL42_RS18710;Dbxref=GenBank:WP_003413432.1;Name=WP_003413432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217112.1;locus_tag=AL42_RS18710;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003413432.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2912875 2913495 . + . ID=gene-AL42_RS18715;Name=AL42_RS18715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18715;old_locus_tag=AL42_02695 NZ_KK316784.1 Protein Homology CDS 2912875 2913495 . + 0 ID=cds-WP_003413441.1;Parent=gene-AL42_RS18715;Dbxref=GenBank:WP_003413441.1;Name=WP_003413441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217113.1;locus_tag=AL42_RS18715;product=DUF4178 domain-containing protein;protein_id=WP_003413441.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2913506 2914000 . + . ID=gene-AL42_RS18720;Name=AL42_RS18720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18720;old_locus_tag=AL42_02696 NZ_KK316784.1 Protein Homology CDS 2913506 2914000 . + 0 ID=cds-WP_003413444.1;Parent=gene-AL42_RS18720;Dbxref=GenBank:WP_003413444.1;Name=WP_003413444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217114.1;locus_tag=AL42_RS18720;product=DUF2617 family protein;protein_id=WP_003413444.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2913997 2914428 . + . ID=gene-AL42_RS18725;Name=AL42_RS18725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18725;old_locus_tag=AL42_02697 NZ_KK316784.1 Protein Homology CDS 2913997 2914428 . + 0 ID=cds-WP_003899390.1;Parent=gene-AL42_RS18725;Dbxref=GenBank:WP_003899390.1;Name=WP_003899390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217115.1;locus_tag=AL42_RS18725;product=DUF4247 domain-containing protein;protein_id=WP_003899390.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2914453 2914911 . + . ID=gene-AL42_RS18730;Name=AL42_RS18730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18730;old_locus_tag=AL42_02698 NZ_KK316784.1 Protein Homology CDS 2914453 2914911 . + 0 ID=cds-WP_003413451.1;Parent=gene-AL42_RS18730;Dbxref=GenBank:WP_003413451.1;Name=WP_003413451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003413451.1;locus_tag=AL42_RS18730;product=DUF350 domain-containing protein;protein_id=WP_003413451.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2914908 2916479 . + . ID=gene-AL42_RS18735;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=AL42_RS18735;old_locus_tag=AL42_02699 NZ_KK316784.1 Protein Homology CDS 2914908 2916479 . + 0 ID=cds-WP_003899392.1;Parent=gene-AL42_RS18735;Dbxref=GenBank:WP_003899392.1;Name=WP_003899392.1;Ontology_term=GO:0003824;gbkey=CDS;gene=speE;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177892.1;locus_tag=AL42_RS18735;product=polyamine aminopropyltransferase;protein_id=WP_003899392.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2916590 2916877 . + . ID=gene-AL42_RS18740;Name=AL42_RS18740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18740;old_locus_tag=AL42_02700 NZ_KK316784.1 Protein Homology CDS 2916590 2916877 . + 0 ID=cds-WP_003413456.1;Parent=gene-AL42_RS18740;Dbxref=GenBank:WP_003413456.1;Name=WP_003413456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177673.1;locus_tag=AL42_RS18740;product=antitoxin VapB41;protein_id=WP_003413456.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2916864 2917304 . + . ID=gene-AL42_RS18745;Name=AL42_RS18745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18745;old_locus_tag=AL42_02701 NZ_KK316784.1 Protein Homology CDS 2916864 2917304 . + 0 ID=cds-WP_003413460.1;Parent=gene-AL42_RS18745;Dbxref=GenBank:WP_003413460.1;Name=WP_003413460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217118.1;locus_tag=AL42_RS18745;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003413460.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2917325 2918080 . - . ID=gene-AL42_RS18750;Name=AL42_RS18750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18750;old_locus_tag=AL42_02702 NZ_KK316784.1 Protein Homology CDS 2917325 2918080 . - 0 ID=cds-WP_003413464.1;Parent=gene-AL42_RS18750;Dbxref=GenBank:WP_003413464.1;Name=WP_003413464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217119.1;locus_tag=AL42_RS18750;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_003413464.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2918213 2918809 . - . ID=gene-AL42_RS18755;Name=pdxT;gbkey=Gene;gene=pdxT;gene_biotype=protein_coding;locus_tag=AL42_RS18755;old_locus_tag=AL42_02703 NZ_KK316784.1 Protein Homology CDS 2918213 2918809 . - 0 ID=cds-WP_003413465.1;Parent=gene-AL42_RS18755;Dbxref=GenBank:WP_003413465.1;Name=WP_003413465.1;Ontology_term=GO:0042823,GO:0004359,GO:0016884;gbkey=CDS;gene=pdxT;go_function=glutaminase activity|0004359||IEA,carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217120.1;locus_tag=AL42_RS18755;product=pyridoxal 5'-phosphate synthase glutaminase subunit PdxT;protein_id=WP_003413465.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2918817 2919662 . - . ID=gene-AL42_RS18760;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=AL42_RS18760;old_locus_tag=AL42_02704 NZ_KK316784.1 Protein Homology CDS 2918817 2919662 . - 0 ID=cds-WP_003413466.1;Parent=gene-AL42_RS18760;Dbxref=GenBank:WP_003413466.1;Name=WP_003413466.1;Ontology_term=GO:0006637,GO:0047617;gbkey=CDS;gene=tesB;go_function=fatty acyl-CoA hydrolase activity|0047617||IEA;go_process=acyl-CoA metabolic process|0006637||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217121.1;locus_tag=AL42_RS18760;product=acyl-CoA thioesterase II;protein_id=WP_003413466.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2919691 2920590 . - . ID=gene-AL42_RS18765;Name=pdxS;gbkey=Gene;gene=pdxS;gene_biotype=protein_coding;locus_tag=AL42_RS18765;old_locus_tag=AL42_02705 NZ_KK316784.1 Protein Homology CDS 2919691 2920590 . - 0 ID=cds-WP_003413468.1;Parent=gene-AL42_RS18765;Dbxref=GenBank:WP_003413468.1;Name=WP_003413468.1;Ontology_term=GO:0042823,GO:0003824;gbkey=CDS;gene=pdxS;go_function=catalytic activity|0003824||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217122.1;locus_tag=AL42_RS18765;product=pyridoxal 5'-phosphate synthase lyase subunit PdxS;protein_id=WP_003413468.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2920718 2921392 . + . ID=gene-AL42_RS18770;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=AL42_RS18770;old_locus_tag=AL42_02706 NZ_KK316784.1 Protein Homology CDS 2920718 2921392 . + 0 ID=cds-WP_003413471.1;Parent=gene-AL42_RS18770;Dbxref=GenBank:WP_003413471.1;Name=WP_003413471.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217123.1;locus_tag=AL42_RS18770;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_003413471.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2921566 2923308 . + . ID=gene-AL42_RS18775;Name=AL42_RS18775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18775;old_locus_tag=AL42_02707 NZ_KK316784.1 Protein Homology CDS 2921566 2923308 . + 0 ID=cds-WP_003899395.1;Parent=gene-AL42_RS18775;Dbxref=GenBank:WP_003899395.1;Name=WP_003899395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177893.1;locus_tag=AL42_RS18775;product=PE-PPE domain-containing protein;protein_id=WP_003899395.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2923330 2924385 . - . ID=gene-AL42_RS18780;Name=AL42_RS18780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18780;old_locus_tag=AL42_02708 NZ_KK316784.1 Protein Homology CDS 2923330 2924385 . - 0 ID=cds-WP_003413475.1;Parent=gene-AL42_RS18780;Dbxref=GenBank:WP_003413475.1;Name=WP_003413475.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217125.1;locus_tag=AL42_RS18780;product=NUDIX hydrolase;protein_id=WP_003413475.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2924385 2925521 . - . ID=gene-AL42_RS18785;Name=pimA;gbkey=Gene;gene=pimA;gene_biotype=protein_coding;locus_tag=AL42_RS18785;old_locus_tag=AL42_02709 NZ_KK316784.1 Protein Homology CDS 2924385 2925521 . - 0 ID=cds-WP_003413478.1;Parent=gene-AL42_RS18785;Dbxref=GenBank:WP_003413478.1;Name=WP_003413478.1;gbkey=CDS;gene=pimA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217126.1;locus_tag=AL42_RS18785;product=phosphatidyl-myo-inositol alpha-mannosyltransferase;protein_id=WP_003413478.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2925532 2926482 . - . ID=gene-AL42_RS18790;Name=AL42_RS18790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18790;old_locus_tag=AL42_02710 NZ_KK316784.1 Protein Homology CDS 2925532 2926482 . - 0 ID=cds-WP_003900533.1;Parent=gene-AL42_RS18790;Dbxref=GenBank:WP_003900533.1;Name=WP_003900533.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217127.1;locus_tag=AL42_RS18790;product=phosphatidylinositol mannoside acyltransferase;protein_id=WP_003900533.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2926479 2927132 . - . ID=gene-AL42_RS18795;Name=pgsA1;gbkey=Gene;gene=pgsA1;gene_biotype=protein_coding;locus_tag=AL42_RS18795;old_locus_tag=AL42_02711 NZ_KK316784.1 Protein Homology CDS 2926479 2927132 . - 0 ID=cds-WP_003413482.1;Parent=gene-AL42_RS18795;Dbxref=GenBank:WP_003413482.1;Name=WP_003413482.1;gbkey=CDS;gene=pgsA1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177894.1;locus_tag=AL42_RS18795;product=phosphatidylinositol phosphate synthase;protein_id=WP_003413482.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2927129 2927716 . - . ID=gene-AL42_RS18800;Name=AL42_RS18800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18800;old_locus_tag=AL42_02712 NZ_KK316784.1 Protein Homology CDS 2927129 2927716 . - 0 ID=cds-WP_003413484.1;Parent=gene-AL42_RS18800;Dbxref=GenBank:WP_003413484.1;Name=WP_003413484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217129.1;locus_tag=AL42_RS18800;product=ATP adenylyltransferase;protein_id=WP_003413484.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2927709 2929787 . - . ID=gene-AL42_RS18805;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=AL42_RS18805;old_locus_tag=AL42_02713 NZ_KK316784.1 Protein Homology CDS 2927709 2929787 . - 0 ID=cds-WP_003413486.1;Parent=gene-AL42_RS18805;Dbxref=GenBank:WP_003413486.1;Name=WP_003413486.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217130.1;locus_tag=AL42_RS18805;product=threonine--tRNA ligase;protein_id=WP_003413486.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2929896 2930123 . + . ID=gene-AL42_RS18810;Name=AL42_RS18810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18810;old_locus_tag=AL42_02714 NZ_KK316784.1 Protein Homology CDS 2929896 2930123 . + 0 ID=cds-WP_003413487.1;Parent=gene-AL42_RS18810;Dbxref=GenBank:WP_003413487.1;Name=WP_003413487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177674.1;locus_tag=AL42_RS18810;product=hypothetical protein;protein_id=WP_003413487.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2930120 2931505 . - . ID=gene-AL42_RS18815;Name=AL42_RS18815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18815;old_locus_tag=AL42_02715 NZ_KK316784.1 Protein Homology CDS 2930120 2931505 . - 0 ID=cds-WP_031651465.1;Parent=gene-AL42_RS18815;Dbxref=GenBank:WP_031651465.1;Name=WP_031651465.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177895.1;locus_tag=AL42_RS18815;product=PE family protein;protein_id=WP_031651465.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2931850 2932350 . + . ID=gene-AL42_RS18820;Name=AL42_RS18820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18820;old_locus_tag=AL42_02716 NZ_KK316784.1 Protein Homology CDS 2931850 2932350 . + 0 ID=cds-WP_003413569.1;Parent=gene-AL42_RS18820;Dbxref=GenBank:WP_003413569.1;Name=WP_003413569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217132.1;locus_tag=AL42_RS18820;product=DUF1990 domain-containing protein;protein_id=WP_003413569.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2932367 2932807 . - . ID=gene-AL42_RS18825;Name=AL42_RS18825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18825;old_locus_tag=AL42_02717 NZ_KK316784.1 Protein Homology CDS 2932367 2932807 . - 0 ID=cds-WP_003413574.1;Parent=gene-AL42_RS18825;Dbxref=GenBank:WP_003413574.1;Name=WP_003413574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217133.1;locus_tag=AL42_RS18825;product=Rv2617c family stress response/phage resistance protein;protein_id=WP_003413574.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2932903 2933631 . + . ID=gene-AL42_RS18830;Name=AL42_RS18830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18830;old_locus_tag=AL42_02718 NZ_KK316784.1 Protein Homology CDS 2932903 2933631 . + 0 ID=cds-WP_003902320.1;Parent=gene-AL42_RS18830;Dbxref=GenBank:WP_003902320.1;Name=WP_003902320.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003902320.1;locus_tag=AL42_RS18830;product=helix-turn-helix transcriptional regulator;protein_id=WP_003902320.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2933616 2933969 . - . ID=gene-AL42_RS18835;Name=AL42_RS18835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18835;old_locus_tag=AL42_02719 NZ_KK316784.1 Protein Homology CDS 2933616 2933969 . - 0 ID=cds-WP_003413583.1;Parent=gene-AL42_RS18835;Dbxref=GenBank:WP_003413583.1;Name=WP_003413583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217135.1;locus_tag=AL42_RS18835;product=cupin domain-containing protein;protein_id=WP_003413583.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2933982 2934407 . - . ID=gene-AL42_RS18840;Name=AL42_RS18840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18840;old_locus_tag=AL42_02720 NZ_KK316784.1 Protein Homology CDS 2933982 2934407 . - 0 ID=cds-WP_003413586.1;Parent=gene-AL42_RS18840;Dbxref=GenBank:WP_003413586.1;Name=WP_003413586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217136.1;locus_tag=AL42_RS18840;product=hypothetical protein;protein_id=WP_003413586.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2934404 2935078 . - . ID=gene-AL42_RS18845;Name=AL42_RS18845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18845;old_locus_tag=AL42_02721 NZ_KK316784.1 Protein Homology CDS 2934404 2935078 . - 0 ID=cds-WP_003901438.1;Parent=gene-AL42_RS18845;Dbxref=GenBank:WP_003901438.1;Name=WP_003901438.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217137.1;locus_tag=AL42_RS18845;product=helix-turn-helix transcriptional regulator;protein_id=WP_003901438.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2935156 2935977 . + . ID=gene-AL42_RS18850;Name=AL42_RS18850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18850;old_locus_tag=AL42_02722 NZ_KK316784.1 Protein Homology CDS 2935156 2935977 . + 0 ID=cds-WP_003413589.1;Parent=gene-AL42_RS18850;Dbxref=GenBank:WP_003413589.1;Name=WP_003413589.1;Ontology_term=GO:0008757;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217138.1;locus_tag=AL42_RS18850;product=class I SAM-dependent methyltransferase;protein_id=WP_003413589.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2936113 2937006 . + . ID=gene-AL42_RS18855;Name=AL42_RS18855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18855;old_locus_tag=AL42_02723 NZ_KK316784.1 Protein Homology CDS 2936113 2937006 . + 0 ID=cds-WP_003413592.1;Parent=gene-AL42_RS18855;Dbxref=GenBank:WP_003413592.1;Name=WP_003413592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217139.1;locus_tag=AL42_RS18855;product=universal stress protein TB31.7;protein_id=WP_003413592.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2937009 2937803 . - . ID=gene-AL42_RS18860;Name=AL42_RS18860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18860;old_locus_tag=AL42_02724 NZ_KK316784.1 Protein Homology CDS 2937009 2937803 . - 0 ID=cds-WP_003899400.1;Parent=gene-AL42_RS18860;Dbxref=GenBank:WP_003899400.1;Name=WP_003899400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899400.1;locus_tag=AL42_RS18860;product=universal stress protein;protein_id=WP_003899400.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2937842 2939023 . - . ID=gene-AL42_RS18865;Name=AL42_RS18865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18865;old_locus_tag=AL42_02725 NZ_KK316784.1 Protein Homology CDS 2937842 2939023 . - 0 ID=cds-WP_003899401.1;Parent=gene-AL42_RS18865;Dbxref=GenBank:WP_003899401.1;Name=WP_003899401.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217141.1;locus_tag=AL42_RS18865;product=site-2 protease family protein;protein_id=WP_003899401.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2939082 2939513 . - . ID=gene-AL42_RS18870;Name=hrp1;gbkey=Gene;gene=hrp1;gene_biotype=protein_coding;locus_tag=AL42_RS18870;old_locus_tag=AL42_02726 NZ_KK316784.1 Protein Homology CDS 2939082 2939513 . - 0 ID=cds-WP_003413598.1;Parent=gene-AL42_RS18870;Dbxref=GenBank:WP_003413598.1;Name=WP_003413598.1;gbkey=CDS;gene=hrp1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217142.1;locus_tag=AL42_RS18870;product=hypoxic response protein Hrp1;protein_id=WP_003413598.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2940027 2941268 . - . ID=gene-AL42_RS18875;Name=AL42_RS18875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18875;old_locus_tag=AL42_02727 NZ_KK316784.1 Protein Homology CDS 2940027 2941268 . - 0 ID=cds-WP_003899402.1;Parent=gene-AL42_RS18875;Dbxref=GenBank:WP_003899402.1;Name=WP_003899402.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217143.1;locus_tag=AL42_RS18875;product=alpha/beta hydrolase family protein;protein_id=WP_003899402.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2941686 2941940 . + . ID=gene-AL42_RS0105260;Name=AL42_RS0105260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0105260;old_locus_tag=AL42_02728 NZ_KK316784.1 Protein Homology CDS 2941686 2941940 . + 0 ID=cds-WP_023637464.1;Parent=gene-AL42_RS0105260;Dbxref=GenBank:WP_023637464.1;Name=WP_023637464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015303543.1;locus_tag=AL42_RS0105260;product=hypothetical protein;protein_id=WP_023637464.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2942287 2943411 . + . ID=gene-AL42_RS18880;Name=AL42_RS18880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18880;old_locus_tag=AL42_02729 NZ_KK316784.1 Protein Homology CDS 2942287 2943411 . + 0 ID=cds-WP_003902322.1;Parent=gene-AL42_RS18880;Dbxref=GenBank:WP_003902322.1;Name=WP_003902322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217145.1;locus_tag=AL42_RS18880;product=Rv2629 family ribosome hibernation factor;protein_id=WP_003902322.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2943413 2943952 . + . ID=gene-AL42_RS18885;Name=AL42_RS18885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18885;old_locus_tag=AL42_02730 NZ_KK316784.1 Protein Homology CDS 2943413 2943952 . + 0 ID=cds-WP_003413614.1;Parent=gene-AL42_RS18885;Dbxref=GenBank:WP_003413614.1;Name=WP_003413614.1;Ontology_term=GO:0006388,GO:0046872,GO:0072669;gbkey=CDS;go_component=tRNA-splicing ligase complex|0072669||IEA;go_function=metal ion binding|0046872||IEA;go_process=tRNA splicing%2C via endonucleolytic cleavage and ligation|0006388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217146.1;locus_tag=AL42_RS18885;product=archease;protein_id=WP_003413614.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2943968 2945390 . + . ID=gene-AL42_RS18890;Name=rtcB;gbkey=Gene;gene=rtcB;gene_biotype=pseudogene;locus_tag=AL42_RS18890;old_locus_tag=AL42_02731;pseudo=true NZ_KK316784.1 Protein Homology CDS 2943968 2945390 . + 0 ID=cds-AL42_RS18890;Parent=gene-AL42_RS18890;Note=frameshifted;gbkey=CDS;gene=rtcB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017351416.1;locus_tag=AL42_RS18890;product=RNA-splicing ligase RtcB;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 2945429 2945710 . - . ID=gene-AL42_RS18895;Name=AL42_RS18895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18895;old_locus_tag=AL42_02732 NZ_KK316784.1 Protein Homology CDS 2945429 2945710 . - 0 ID=cds-WP_003413619.1;Parent=gene-AL42_RS18895;Dbxref=GenBank:WP_003413619.1;Name=WP_003413619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217148.1;locus_tag=AL42_RS18895;product=DUF1876 domain-containing protein;protein_id=WP_003413619.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2945855 2946340 . - . ID=gene-AL42_RS18900;Name=AL42_RS18900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18900;old_locus_tag=AL42_02733 NZ_KK316784.1 Protein Homology CDS 2945855 2946340 . - 0 ID=cds-WP_003413625.1;Parent=gene-AL42_RS18900;Dbxref=GenBank:WP_003413625.1;Name=WP_003413625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217149.1;locus_tag=AL42_RS18900;product=non-heme di-iron catalase;protein_id=WP_003413625.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2946367 2946621 . - . ID=gene-AL42_RS26235;Name=AL42_RS26235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS26235 NZ_KK316784.1 Protein Homology CDS 2946367 2946621 . - 0 ID=cds-WP_003908019.1;Parent=gene-AL42_RS26235;Dbxref=GenBank:WP_003908019.1;Name=WP_003908019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003908019.1;locus_tag=AL42_RS26235;product=hypothetical protein;protein_id=WP_003908019.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2946625 2948961 . - . ID=gene-AL42_RS18905;Name=AL42_RS18905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18905;old_locus_tag=AL42_02734 NZ_KK316784.1 Protein Homology CDS 2946625 2948961 . - 0 ID=cds-WP_009938544.1;Parent=gene-AL42_RS18905;Dbxref=GenBank:WP_009938544.1;Name=WP_009938544.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177896.1;locus_tag=AL42_RS18905;product=PE family protein;protein_id=WP_009938544.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2948990 2949232 . + . ID=gene-AL42_RS18910;Name=AL42_RS18910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18910;old_locus_tag=AL42_02735 NZ_KK316784.1 Protein Homology CDS 2948990 2949232 . + 0 ID=cds-WP_003899405.1;Parent=gene-AL42_RS18910;Dbxref=GenBank:WP_003899405.1;Name=WP_003899405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217151.1;locus_tag=AL42_RS18910;product=hypothetical protein;protein_id=WP_003899405.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2949233 2949910 . + . ID=gene-AL42_RS18915;Name=AL42_RS18915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18915;old_locus_tag=AL42_02736 NZ_KK316784.1 Protein Homology CDS 2949233 2949910 . + 0 ID=cds-WP_003899406.1;Parent=gene-AL42_RS18915;Dbxref=GenBank:WP_003899406.1;Name=WP_003899406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217152.1;locus_tag=AL42_RS18915;product=phosphotransferase-like protein;protein_id=WP_003899406.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2950106 2950762 . + . ID=gene-AL42_RS18920;Name=dedA;gbkey=Gene;gene=dedA;gene_biotype=protein_coding;locus_tag=AL42_RS18920;old_locus_tag=AL42_02737 NZ_KK316784.1 Protein Homology CDS 2950106 2950762 . + 0 ID=cds-WP_003413654.1;Parent=gene-AL42_RS18920;Dbxref=GenBank:WP_003413654.1;Name=WP_003413654.1;Ontology_term=GO:0016020;gbkey=CDS;gene=dedA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217153.1;locus_tag=AL42_RS18920;product=DedA family protein;protein_id=WP_003413654.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2950925 2951371 . + . ID=gene-AL42_RS18925;Name=AL42_RS18925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18925;old_locus_tag=AL42_02738 NZ_KK316784.1 Protein Homology CDS 2950925 2951371 . + 0 ID=cds-WP_003413657.1;Parent=gene-AL42_RS18925;Dbxref=GenBank:WP_003413657.1;Name=WP_003413657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217154.1;locus_tag=AL42_RS18925;product=anti-sigma factor antagonist;protein_id=WP_003413657.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2951546 2951878 . - . ID=gene-AL42_RS18930;Name=AL42_RS18930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18930;old_locus_tag=AL42_02739 NZ_KK316784.1 Protein Homology CDS 2951546 2951878 . - 0 ID=cds-WP_003413663.1;Parent=gene-AL42_RS18930;Dbxref=GenBank:WP_003413663.1;Name=WP_003413663.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217155.1;locus_tag=AL42_RS18930;product=YnfA family protein;protein_id=WP_003413663.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2951998 2952357 . - . ID=gene-AL42_RS18935;Name=AL42_RS18935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18935;old_locus_tag=AL42_02740 NZ_KK316784.1 Protein Homology CDS 2951998 2952357 . - 0 ID=cds-WP_003413665.1;Parent=gene-AL42_RS18935;Dbxref=GenBank:WP_003413665.1;Name=WP_003413665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217156.1;locus_tag=AL42_RS18935;product=Rv2640c family ArsR-like transcriptional regulator;protein_id=WP_003413665.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2952459 2952917 . + . ID=gene-AL42_RS18940;Name=cadI;gbkey=Gene;gene=cadI;gene_biotype=protein_coding;locus_tag=AL42_RS18940;old_locus_tag=AL42_02741 NZ_KK316784.1 Protein Homology CDS 2952459 2952917 . + 0 ID=cds-WP_003413675.1;Parent=gene-AL42_RS18940;Dbxref=GenBank:WP_003413675.1;Name=WP_003413675.1;gbkey=CDS;gene=cadI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217157.1;locus_tag=AL42_RS18940;product=cadmium-induced metalloenzyme CadI;protein_id=WP_003413675.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2953053 2953433 . + . ID=gene-AL42_RS18945;Name=AL42_RS18945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18945;old_locus_tag=AL42_02742 NZ_KK316784.1 Protein Homology CDS 2953053 2953433 . + 0 ID=cds-WP_003899407.1;Parent=gene-AL42_RS18945;Dbxref=GenBank:WP_003899407.1;Name=WP_003899407.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217158.1;locus_tag=AL42_RS18945;product=ArsR/SmtB family transcription factor;protein_id=WP_003899407.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2953430 2954926 . + . ID=gene-AL42_RS18950;Name=arsB;gbkey=Gene;gene=arsB;gene_biotype=protein_coding;locus_tag=AL42_RS18950;old_locus_tag=AL42_02743 NZ_KK316784.1 Protein Homology CDS 2953430 2954926 . + 0 ID=cds-WP_003413686.1;Parent=gene-AL42_RS18950;Dbxref=GenBank:WP_003413686.1;Name=WP_003413686.1;Ontology_term=GO:0015700,GO:0046685,GO:0008490,GO:0015103,GO:0015297,GO:0016020;gbkey=CDS;gene=arsB;go_component=membrane|0016020||IEA;go_function=arsenite secondary active transmembrane transporter activity|0008490||IEA,inorganic anion transmembrane transporter activity|0015103||IEA,antiporter activity|0015297||IEA;go_process=arsenite transport|0015700||IEA,response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217159.1;locus_tag=AL42_RS18950;product=ACR3 family arsenite efflux transporter;protein_id=WP_003413686.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2955161 2955352 . + . ID=gene-AL42_RS0105270;Name=AL42_RS0105270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0105270 NZ_KK316784.1 Protein Homology CDS 2955161 2955352 . + 0 ID=cds-WP_003912823.1;Parent=gene-AL42_RS0105270;Dbxref=GenBank:WP_003912823.1;Name=WP_003912823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912823.1;locus_tag=AL42_RS0105270;product=antitoxin MazE family protein;protein_id=WP_003912823.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2955467 2955598 . + . ID=gene-AL42_RS28020;Name=AL42_RS28020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS28020 NZ_KK316784.1 Protein Homology CDS 2955467 2955598 . + 0 ID=cds-WP_003413709.1;Parent=gene-AL42_RS28020;Dbxref=GenBank:WP_003413709.1;Name=WP_003413709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003413709.1;locus_tag=AL42_RS28020;product=hypothetical protein;protein_id=WP_003413709.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2956017 2956088 . - . ID=gene-AL42_RS18955;Name=AL42_RS18955;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL42_RS18955;old_locus_tag=AL42_02746 NZ_KK316784.1 tRNAscan-SE tRNA 2956017 2956088 . - . ID=rna-AL42_RS18955;Parent=gene-AL42_RS18955;anticodon=(pos:complement(2956054..2956056));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS18955;product=tRNA-Val NZ_KK316784.1 tRNAscan-SE exon 2956017 2956088 . - . ID=exon-AL42_RS18955-1;Parent=rna-AL42_RS18955;anticodon=(pos:complement(2956054..2956056));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS18955;product=tRNA-Val NZ_KK316784.1 RefSeq gene 2956273 2956345 . + . ID=gene-AL42_RS18960;Name=AL42_RS18960;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL42_RS18960;old_locus_tag=AL42_02747 NZ_KK316784.1 tRNAscan-SE tRNA 2956273 2956345 . + . ID=rna-AL42_RS18960;Parent=gene-AL42_RS18960;anticodon=(pos:2956306..2956308);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS18960;product=tRNA-Gly NZ_KK316784.1 tRNAscan-SE exon 2956273 2956345 . + . ID=exon-AL42_RS18960-1;Parent=rna-AL42_RS18960;anticodon=(pos:2956306..2956308);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS18960;product=tRNA-Gly NZ_KK316784.1 RefSeq gene 2956375 2956448 . + . ID=gene-AL42_RS18965;Name=AL42_RS18965;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL42_RS18965;old_locus_tag=AL42_02748 NZ_KK316784.1 tRNAscan-SE tRNA 2956375 2956448 . + . ID=rna-AL42_RS18965;Parent=gene-AL42_RS18965;anticodon=(pos:2956407..2956409);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS18965;product=tRNA-Cys NZ_KK316784.1 tRNAscan-SE exon 2956375 2956448 . + . ID=exon-AL42_RS18965-1;Parent=rna-AL42_RS18965;anticodon=(pos:2956407..2956409);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS18965;product=tRNA-Cys NZ_KK316784.1 RefSeq gene 2956462 2956536 . + . ID=gene-AL42_RS18970;Name=AL42_RS18970;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL42_RS18970;old_locus_tag=AL42_02749 NZ_KK316784.1 tRNAscan-SE tRNA 2956462 2956536 . + . ID=rna-AL42_RS18970;Parent=gene-AL42_RS18970;anticodon=(pos:2956494..2956496);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS18970;product=tRNA-Val NZ_KK316784.1 tRNAscan-SE exon 2956462 2956536 . + . ID=exon-AL42_RS18970-1;Parent=rna-AL42_RS18970;anticodon=(pos:2956494..2956496);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS18970;product=tRNA-Val NZ_KK316784.1 RefSeq gene 2956643 2957074 . + . ID=gene-AL42_RS18975;Name=AL42_RS18975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18975;old_locus_tag=AL42_02750 NZ_KK316784.1 Protein Homology CDS 2956643 2957074 . + 0 ID=cds-WP_003899409.1;Parent=gene-AL42_RS18975;Dbxref=GenBank:WP_003899409.1;Name=WP_003899409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217161.1;locus_tag=AL42_RS18975;product=hypothetical protein;protein_id=WP_003899409.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2957071 2958069 . + . ID=gene-AL42_RS18980;Name=AL42_RS18980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18980;old_locus_tag=AL42_02751 NZ_KK316784.1 Protein Homology CDS 2957071 2958069 . + 0 ID=cds-WP_003900538.1;Parent=gene-AL42_RS18980;Dbxref=GenBank:WP_003900538.1;Name=WP_003900538.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217162.1;locus_tag=AL42_RS18980;product=tyrosine-type recombinase/integrase;protein_id=WP_003900538.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2958083 2958547 . + . ID=gene-AL42_RS0105280;Name=AL42_RS0105280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0105280;old_locus_tag=AL42_02752 NZ_KK316784.1 Protein Homology CDS 2958083 2958547 . + 0 ID=cds-WP_003900539.1;Parent=gene-AL42_RS0105280;Dbxref=GenBank:WP_003900539.1;Name=WP_003900539.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014273.6;locus_tag=AL42_RS0105280;product=ParB N-terminal domain-containing protein;protein_id=WP_003900539.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2958535 2958786 . + . ID=gene-AL42_RS0105285;Name=AL42_RS0105285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0105285 NZ_KK316784.1 Protein Homology CDS 2958535 2958786 . + 0 ID=cds-WP_003908028.1;Parent=gene-AL42_RS0105285;Dbxref=GenBank:WP_003908028.1;Name=WP_003908028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017487744.1;locus_tag=AL42_RS0105285;product=hypothetical protein;protein_id=WP_003908028.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2958957 2960396 . - . ID=gene-AL42_RS18985;Name=AL42_RS18985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18985;old_locus_tag=AL42_02753 NZ_KK316784.1 Protein Homology CDS 2958957 2960396 . - 0 ID=cds-WP_003901443.1;Parent=gene-AL42_RS18985;Dbxref=GenBank:WP_003901443.1;Name=WP_003901443.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217166.1;locus_tag=AL42_RS18985;product=phage major capsid protein;protein_id=WP_003901443.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2960404 2960937 . - . ID=gene-AL42_RS18990;Name=AL42_RS18990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18990;old_locus_tag=AL42_02754 NZ_KK316784.1 Protein Homology CDS 2960404 2960937 . - 0 ID=cds-WP_003899412.1;Parent=gene-AL42_RS18990;Dbxref=GenBank:WP_003899412.1;Name=WP_003899412.1;Ontology_term=GO:0019068,GO:0019082,GO:0005198,GO:0008233;gbkey=CDS;go_function=structural molecule activity|0005198||IEA,peptidase activity|0008233||IEA;go_process=virion assembly|0019068||IEA,viral protein processing|0019082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217167.1;locus_tag=AL42_RS18990;product=HK97 family phage prohead protease;protein_id=WP_003899412.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2961090 2961581 . - . ID=gene-AL42_RS26245;Name=AL42_RS26245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS26245;old_locus_tag=AL42_02755 NZ_KK316784.1 Protein Homology CDS 2961090 2961581 . - 0 ID=cds-WP_003900541.1;Parent=gene-AL42_RS26245;Dbxref=GenBank:WP_003900541.1;Name=WP_003900541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900541.1;locus_tag=AL42_RS26245;product=phage terminase small subunit P27 family;protein_id=WP_003900541.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2961748 2962071 . - . ID=gene-AL42_RS18995;Name=AL42_RS18995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS18995;old_locus_tag=AL42_02756 NZ_KK316784.1 Protein Homology CDS 2961748 2962071 . - 0 ID=cds-WP_003899414.1;Parent=gene-AL42_RS18995;Dbxref=GenBank:WP_003899414.1;Name=WP_003899414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217169.1;locus_tag=AL42_RS18995;product=type II toxin-antitoxin system toxin;protein_id=WP_003899414.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2962151 2962396 . - . ID=gene-AL42_RS19000;Name=AL42_RS19000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19000;old_locus_tag=AL42_02757 NZ_KK316784.1 Protein Homology CDS 2962151 2962396 . - 0 ID=cds-WP_003899415.1;Parent=gene-AL42_RS19000;Dbxref=GenBank:WP_003899415.1;Name=WP_003899415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217170.1;locus_tag=AL42_RS19000;product=type II toxin-antitoxin system antitoxin;protein_id=WP_003899415.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2962393 2963820 . - . ID=gene-AL42_RS19005;Name=AL42_RS19005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19005;old_locus_tag=AL42_02758 NZ_KK316784.1 Protein Homology CDS 2962393 2963820 . - 0 ID=cds-WP_003899416.1;Parent=gene-AL42_RS19005;Dbxref=GenBank:WP_003899416.1;Name=WP_003899416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217171.1;locus_tag=AL42_RS19005;product=DUF3631 domain-containing protein;protein_id=WP_003899416.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2963822 2964214 . - . ID=gene-AL42_RS19010;Name=AL42_RS19010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19010;old_locus_tag=AL42_02759 NZ_KK316784.1 Protein Homology CDS 2963822 2964214 . - 0 ID=cds-WP_003899417.1;Parent=gene-AL42_RS19010;Dbxref=GenBank:WP_003899417.1;Name=WP_003899417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217172.1;locus_tag=AL42_RS19010;product=DUF2742 domain-containing protein;protein_id=WP_003899417.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2964211 2964471 . - . ID=gene-AL42_RS0105295;Name=AL42_RS0105295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0105295;old_locus_tag=AL42_02760 NZ_KK316784.1 Protein Homology CDS 2964211 2964471 . - 0 ID=cds-WP_003899418.1;Parent=gene-AL42_RS0105295;Dbxref=GenBank:WP_003899418.1;Name=WP_003899418.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217173.1;locus_tag=AL42_RS0105295;product=helix-turn-helix domain-containing protein;protein_id=WP_003899418.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2964488 2964850 . - . ID=gene-AL42_RS19015;Name=AL42_RS19015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19015;old_locus_tag=AL42_02761 NZ_KK316784.1 Protein Homology CDS 2964488 2964850 . - 0 ID=cds-WP_003900543.1;Parent=gene-AL42_RS19015;Dbxref=GenBank:WP_003900543.1;Name=WP_003900543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217174.1;locus_tag=AL42_RS19015;product=hypothetical protein;protein_id=WP_003900543.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2964853 2965980 . - . ID=gene-AL42_RS19020;Name=AL42_RS19020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19020;old_locus_tag=AL42_02762 NZ_KK316784.1 Protein Homology CDS 2964853 2965980 . - 0 ID=cds-WP_003899420.1;Parent=gene-AL42_RS19020;Dbxref=GenBank:WP_003899420.1;Name=WP_003899420.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217175.1;locus_tag=AL42_RS19020;product=tyrosine-type recombinase/integrase;protein_id=WP_003899420.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2966125 2966352 . - . ID=gene-AL42_RS19025;Name=AL42_RS19025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19025;old_locus_tag=AL42_02763 NZ_KK316784.1 Protein Homology CDS 2966125 2966352 . - 0 ID=cds-WP_003899421.1;Parent=gene-AL42_RS19025;Dbxref=GenBank:WP_003899421.1;Name=WP_003899421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217176.1;locus_tag=AL42_RS19025;product=hypothetical protein;protein_id=WP_003899421.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2966349 2966738 . - . ID=gene-AL42_RS26250;Name=AL42_RS26250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS26250;old_locus_tag=AL42_02764 NZ_KK316784.1 Protein Homology CDS 2966349 2966738 . - 0 ID=cds-WP_003899422.1;Parent=gene-AL42_RS26250;Dbxref=GenBank:WP_003899422.1;Name=WP_003899422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217177.1;locus_tag=AL42_RS26250;product=hypothetical protein;protein_id=WP_003899422.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2966644 2966916 . + . ID=gene-AL42_RS19030;Name=AL42_RS19030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19030;old_locus_tag=AL42_02765 NZ_KK316784.1 Protein Homology CDS 2966644 2966916 . + 0 ID=cds-WP_003900544.1;Parent=gene-AL42_RS19030;Dbxref=GenBank:WP_003900544.1;Name=WP_003900544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217178.1;locus_tag=AL42_RS19030;product=hypothetical protein;protein_id=WP_003900544.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2967015 2967248 . + . ID=gene-AL42_RS19035;Name=AL42_RS19035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19035;old_locus_tag=AL42_02766 NZ_KK316784.1 Protein Homology CDS 2967015 2967248 . + 0 ID=cds-WP_003413717.1;Parent=gene-AL42_RS19035;Dbxref=GenBank:WP_003413717.1;Name=WP_003413717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217179.1;locus_tag=AL42_RS19035;product=hypothetical protein;protein_id=WP_003413717.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2967259 2967513 . + . ID=gene-AL42_RS19040;Name=AL42_RS19040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19040;old_locus_tag=AL42_02767 NZ_KK316784.1 Protein Homology CDS 2967259 2967513 . + 0 ID=cds-WP_003413719.1;Parent=gene-AL42_RS19040;Dbxref=GenBank:WP_003413719.1;Name=WP_003413719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217180.1;locus_tag=AL42_RS19040;product=hypothetical protein;protein_id=WP_003413719.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2967861 2968142 . + . ID=gene-AL42_RS19045;Name=AL42_RS19045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19045;old_locus_tag=AL42_02768 NZ_KK316784.1 Protein Homology CDS 2967861 2968142 . + 0 ID=cds-WP_003899423.1;Parent=gene-AL42_RS19045;Dbxref=GenBank:WP_003899423.1;Name=WP_003899423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217181.1;locus_tag=AL42_RS19045;product=hypothetical protein;protein_id=WP_003899423.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 2968233 2969015 . + . ID=gene-AL42_RS19050;Name=AL42_RS19050;end_range=2969015,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS19050;old_locus_tag=AL42_02769;partial=true;pseudo=true NZ_KK316784.1 Protein Homology CDS 2968233 2969015 . + 0 ID=cds-AL42_RS19050;Parent=gene-AL42_RS19050;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=2969015,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215563.1;locus_tag=AL42_RS19050;partial=true;product=IS256-like element IS1081 family transposase;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 2969058 2969816 . + . ID=gene-AL42_RS19055;Name=AL42_RS19055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19055;old_locus_tag=AL42_02770 NZ_KK316784.1 Protein Homology CDS 2969058 2969816 . + 0 ID=cds-WP_003413845.1;Parent=gene-AL42_RS19055;Dbxref=GenBank:WP_003413845.1;Name=WP_003413845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177897.1;locus_tag=AL42_RS19055;product=Clp protease N-terminal domain-containing protein;protein_id=WP_003413845.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2969895 2970416 . + . ID=gene-AL42_RS19060;Name=AL42_RS19060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19060;old_locus_tag=AL42_02771 NZ_KK316784.1 Protein Homology CDS 2969895 2970416 . + 0 ID=cds-WP_003899425.1;Parent=gene-AL42_RS19060;Dbxref=GenBank:WP_003899425.1;Name=WP_003899425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217184.1;locus_tag=AL42_RS19060;product=hypothetical protein;protein_id=WP_003899425.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2970445 2970915 . + . ID=gene-AL42_RS19065;Name=AL42_RS19065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19065;old_locus_tag=AL42_02772 NZ_KK316784.1 Protein Homology CDS 2970445 2970915 . + 0 ID=cds-WP_003413852.1;Parent=gene-AL42_RS19065;Dbxref=GenBank:WP_003413852.1;Name=WP_003413852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217185.1;locus_tag=AL42_RS19065;product=GNAT family N-acetyltransferase;protein_id=WP_003413852.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2970893 2972002 . - . ID=gene-AL42_RS19070;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=AL42_RS19070;old_locus_tag=AL42_02773 NZ_KK316784.1 Protein Homology CDS 2970893 2972002 . - 0 ID=cds-WP_003899426.1;Parent=gene-AL42_RS19070;Dbxref=GenBank:WP_003899426.1;Name=WP_003899426.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217186.1;locus_tag=AL42_RS19070;product=cell division protein ZapE;protein_id=WP_003899426.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2972001 2972777 . + . ID=gene-AL42_RS19075;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=AL42_RS19075;old_locus_tag=AL42_02774 NZ_KK316784.1 Protein Homology CDS 2972001 2972777 . + 0 ID=cds-WP_003413854.1;Parent=gene-AL42_RS19075;Dbxref=GenBank:WP_003413854.1;Name=WP_003413854.1;gbkey=CDS;gene=ribD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217187.1;locus_tag=AL42_RS19075;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase;protein_id=WP_003413854.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2972844 2974430 . + . ID=gene-AL42_RS19080;Name=AL42_RS19080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19080;old_locus_tag=AL42_02775 NZ_KK316784.1 Protein Homology CDS 2972844 2974430 . + 0 ID=cds-WP_003413857.1;Parent=gene-AL42_RS19080;Dbxref=GenBank:WP_003413857.1;Name=WP_003413857.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217188.1;locus_tag=AL42_RS19080;product=alpha/beta hydrolase;protein_id=WP_003413857.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2974453 2975754 . + . ID=gene-AL42_RS19085;Name=aftC;gbkey=Gene;gene=aftC;gene_biotype=protein_coding;locus_tag=AL42_RS19085;old_locus_tag=AL42_02776 NZ_KK316784.1 Protein Homology CDS 2974453 2975754 . + 0 ID=cds-WP_003413860.1;Parent=gene-AL42_RS19085;Dbxref=GenBank:WP_003413860.1;Name=WP_003413860.1;gbkey=CDS;gene=aftC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217189.1;locus_tag=AL42_RS19085;product=arabinofuranan 3-O-arabinosyltransferase;protein_id=WP_003413860.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2975923 2976333 . + . ID=gene-AL42_RS19090;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=AL42_RS19090;old_locus_tag=AL42_02777 NZ_KK316784.1 Protein Homology CDS 2975923 2976333 . + 0 ID=cds-WP_003413865.1;Parent=gene-AL42_RS19090;Dbxref=GenBank:WP_003413865.1;Name=WP_003413865.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217190.1;locus_tag=AL42_RS19090;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_003413865.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2976401 2977153 . - . ID=gene-AL42_RS19095;Name=AL42_RS19095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19095;old_locus_tag=AL42_02778 NZ_KK316784.1 Protein Homology CDS 2976401 2977153 . - 0 ID=cds-WP_003413866.1;Parent=gene-AL42_RS19095;Dbxref=GenBank:WP_003413866.1;Name=WP_003413866.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217191.1;locus_tag=AL42_RS19095;product=class I SAM-dependent methyltransferase;protein_id=WP_003413866.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2977150 2977845 . - . ID=gene-AL42_RS19100;Name=hemQ;gbkey=Gene;gene=hemQ;gene_biotype=protein_coding;locus_tag=AL42_RS19100;old_locus_tag=AL42_02779 NZ_KK316784.1 Protein Homology CDS 2977150 2977845 . - 0 ID=cds-WP_003413869.1;Parent=gene-AL42_RS19100;Dbxref=GenBank:WP_003413869.1;Name=WP_003413869.1;gbkey=CDS;gene=hemQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217192.1;locus_tag=AL42_RS19100;product=hydrogen peroxide-dependent heme synthase;protein_id=WP_003413869.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2977851 2979209 . - . ID=gene-AL42_RS19105;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=AL42_RS19105;old_locus_tag=AL42_02780 NZ_KK316784.1 Protein Homology CDS 2977851 2979209 . - 0 ID=cds-WP_003413871.1;Parent=gene-AL42_RS19105;Dbxref=GenBank:WP_003413871.1;Name=WP_003413871.1;Ontology_term=GO:0006779,GO:0004729;gbkey=CDS;gene=hemY;go_function=oxygen-dependent protoporphyrinogen oxidase activity|0004729||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177675.1;locus_tag=AL42_RS19105;product=protoporphyrinogen oxidase;protein_id=WP_003413871.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2979206 2980279 . - . ID=gene-AL42_RS19110;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=AL42_RS19110;old_locus_tag=AL42_02781 NZ_KK316784.1 Protein Homology CDS 2979206 2980279 . - 0 ID=cds-WP_003413873.1;Parent=gene-AL42_RS19110;Dbxref=GenBank:WP_003413873.1;Name=WP_003413873.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217194.1;locus_tag=AL42_RS19110;product=uroporphyrinogen decarboxylase;protein_id=WP_003413873.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2980332 2981162 . + . ID=gene-AL42_RS19115;Name=AL42_RS19115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19115;old_locus_tag=AL42_02782 NZ_KK316784.1 Protein Homology CDS 2980332 2981162 . + 0 ID=cds-WP_003413876.1;Parent=gene-AL42_RS19115;Dbxref=GenBank:WP_003413876.1;Name=WP_003413876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217195.1;locus_tag=AL42_RS19115;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_003413876.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2981424 2982056 . + . ID=gene-AL42_RS19120;Name=AL42_RS19120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19120;old_locus_tag=AL42_02783 NZ_KK316784.1 Protein Homology CDS 2981424 2982056 . + 0 ID=cds-WP_003413879.1;Parent=gene-AL42_RS19120;Dbxref=GenBank:WP_003413879.1;Name=WP_003413879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217196.1;locus_tag=AL42_RS19120;product=DUF3000 domain-containing protein;protein_id=WP_003413879.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2982058 2983374 . + . ID=gene-AL42_RS19125;Name=AL42_RS19125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19125;old_locus_tag=AL42_02784 NZ_KK316784.1 Protein Homology CDS 2982058 2983374 . + 0 ID=cds-WP_003413889.1;Parent=gene-AL42_RS19125;Dbxref=GenBank:WP_003413889.1;Name=WP_003413889.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217197.1;locus_tag=AL42_RS19125;product=ribonuclease D;protein_id=WP_003413889.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2983371 2985287 . - . ID=gene-AL42_RS19130;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=AL42_RS19130;old_locus_tag=AL42_02785 NZ_KK316784.1 Protein Homology CDS 2983371 2985287 . - 0 ID=cds-WP_003413891.1;Parent=gene-AL42_RS19130;Dbxref=GenBank:WP_003413891.1;Name=WP_003413891.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177898.1;locus_tag=AL42_RS19130;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_003413891.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2985485 2985928 . + . ID=gene-AL42_RS19135;Name=AL42_RS19135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19135;old_locus_tag=AL42_02786 NZ_KK316784.1 Protein Homology CDS 2985485 2985928 . + 0 ID=cds-WP_003912830.1;Parent=gene-AL42_RS19135;Dbxref=GenBank:WP_003912830.1;Name=WP_003912830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008258518.1;locus_tag=AL42_RS19135;product=CBS domain-containing protein;protein_id=WP_003912830.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2985933 2987222 . + . ID=gene-AL42_RS19140;Name=arsA;gbkey=Gene;gene=arsA;gene_biotype=protein_coding;locus_tag=AL42_RS19140;old_locus_tag=AL42_02787 NZ_KK316784.1 Protein Homology CDS 2985933 2987222 . + 0 ID=cds-WP_003413894.1;Parent=gene-AL42_RS19140;Dbxref=GenBank:WP_003413894.1;Name=WP_003413894.1;gbkey=CDS;gene=arsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217200.1;locus_tag=AL42_RS19140;product=ArsB/NhaD family transporter;protein_id=WP_003413894.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2987302 2988588 . + . ID=gene-AL42_RS19145;Name=AL42_RS19145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19145;old_locus_tag=AL42_02788 NZ_KK316784.1 Protein Homology CDS 2987302 2988588 . + 0 ID=cds-WP_003901451.1;Parent=gene-AL42_RS19145;Dbxref=GenBank:WP_003901451.1;Name=WP_003901451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177899.1;locus_tag=AL42_RS19145;product=ArsB/NhaD family transporter;protein_id=WP_003901451.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2988599 2989357 . - . ID=gene-AL42_RS19150;Name=AL42_RS19150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19150;old_locus_tag=AL42_02789 NZ_KK316784.1 Protein Homology CDS 2988599 2989357 . - 0 ID=cds-WP_003413897.1;Parent=gene-AL42_RS19150;Dbxref=GenBank:WP_003413897.1;Name=WP_003413897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217202.1;locus_tag=AL42_RS19150;product=fluoroquinolones efflux ABC transporter permease;protein_id=WP_003413897.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2989354 2990067 . - . ID=gene-AL42_RS19155;Name=AL42_RS19155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19155;old_locus_tag=AL42_02790 NZ_KK316784.1 Protein Homology CDS 2989354 2990067 . - 0 ID=cds-WP_003413912.1;Parent=gene-AL42_RS19155;Dbxref=GenBank:WP_003413912.1;Name=WP_003413912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217203.1;locus_tag=AL42_RS19155;product=fluoroquinolone export ABC transporter permease subunit;protein_id=WP_003413912.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2990064 2990969 . - . ID=gene-AL42_RS19160;Name=AL42_RS19160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19160;old_locus_tag=AL42_02791 NZ_KK316784.1 Protein Homology CDS 2990064 2990969 . - 0 ID=cds-WP_003413913.1;Parent=gene-AL42_RS19160;Dbxref=GenBank:WP_003413913.1;Name=WP_003413913.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217204.1;locus_tag=AL42_RS19160;product=ABC transporter ATP-binding protein;protein_id=WP_003413913.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2991164 2992381 . - . ID=gene-AL42_RS19165;Name=AL42_RS19165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19165;old_locus_tag=AL42_02792 NZ_KK316784.1 Protein Homology CDS 2991164 2992381 . - 0 ID=cds-WP_003900550.1;Parent=gene-AL42_RS19165;Dbxref=GenBank:WP_003900550.1;Name=WP_003900550.1;Ontology_term=GO:0001510,GO:0008757,GO:0046872,GO:1904047;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,metal ion binding|0046872||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217205.1;locus_tag=AL42_RS19165;product=class I SAM-dependent RNA methyltransferase;protein_id=WP_003900550.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2992555 2994528 . - . ID=gene-AL42_RS19170;Name=AL42_RS19170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19170;old_locus_tag=AL42_02793 NZ_KK316784.1 Protein Homology CDS 2992555 2994528 . - 0 ID=cds-WP_003899433.1;Parent=gene-AL42_RS19170;Dbxref=GenBank:WP_003899433.1;Name=WP_003899433.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217206.1;locus_tag=AL42_RS19170;product=APC family permease;protein_id=WP_003899433.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2994663 2995346 . + . ID=gene-AL42_RS19175;Name=ceoB;gbkey=Gene;gene=ceoB;gene_biotype=protein_coding;locus_tag=AL42_RS19175;old_locus_tag=AL42_02794 NZ_KK316784.1 Protein Homology CDS 2994663 2995346 . + 0 ID=cds-WP_003902336.1;Parent=gene-AL42_RS19175;Dbxref=GenBank:WP_003902336.1;Name=WP_003902336.1;Ontology_term=GO:0030001,GO:0034220,GO:0022857,GO:0016020;gbkey=CDS;gene=ceoB;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=metal ion transport|0030001||IEA,monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177900.1;locus_tag=AL42_RS19175;product=potassium channel family protein;protein_id=WP_003902336.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2995343 2996005 . + . ID=gene-AL42_RS19180;Name=ceoC;gbkey=Gene;gene=ceoC;gene_biotype=protein_coding;locus_tag=AL42_RS19180;old_locus_tag=AL42_02795 NZ_KK316784.1 Protein Homology CDS 2995343 2996005 . + 0 ID=cds-WP_003413921.1;Parent=gene-AL42_RS19180;Dbxref=GenBank:WP_003413921.1;Name=WP_003413921.1;Ontology_term=GO:0030001,GO:0034220,GO:0022857,GO:0016020;gbkey=CDS;gene=ceoC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=metal ion transport|0030001||IEA,monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177901.1;locus_tag=AL42_RS19180;product=potassium channel family protein;protein_id=WP_003413921.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2996016 2996687 . - . ID=gene-AL42_RS19185;Name=AL42_RS19185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19185;old_locus_tag=AL42_02796 NZ_KK316784.1 Protein Homology CDS 2996016 2996687 . - 0 ID=cds-WP_003901452.1;Parent=gene-AL42_RS19185;Dbxref=GenBank:WP_003901452.1;Name=WP_003901452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217209.1;locus_tag=AL42_RS19185;product=DUF3159 domain-containing protein;protein_id=WP_003901452.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2996718 2997086 . - . ID=gene-AL42_RS19190;Name=AL42_RS19190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19190;old_locus_tag=AL42_02797 NZ_KK316784.1 Protein Homology CDS 2996718 2997086 . - 0 ID=cds-WP_003901453.1;Parent=gene-AL42_RS19190;Dbxref=GenBank:WP_003901453.1;Name=WP_003901453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217210.1;locus_tag=AL42_RS19190;product=OB-fold nucleic acid binding domain-containing protein;protein_id=WP_003901453.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2997235 2997942 . + . ID=gene-AL42_RS19195;Name=AL42_RS19195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19195;old_locus_tag=AL42_02798 NZ_KK316784.1 Protein Homology CDS 2997235 2997942 . + 0 ID=cds-WP_003413927.1;Parent=gene-AL42_RS19195;Dbxref=GenBank:WP_003413927.1;Name=WP_003413927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217211.1;locus_tag=AL42_RS19195;product=alpha/beta fold hydrolase;protein_id=WP_003413927.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2998148 2998927 . - . ID=gene-AL42_RS19200;Name=AL42_RS19200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19200;old_locus_tag=AL42_02799 NZ_KK316784.1 Protein Homology CDS 2998148 2998927 . - 0 ID=cds-WP_003413928.1;Parent=gene-AL42_RS19200;Dbxref=GenBank:WP_003413928.1;Name=WP_003413928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217212.1;locus_tag=AL42_RS19200;product=DUF3710 domain-containing protein;protein_id=WP_003413928.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2999002 2999466 . - . ID=gene-AL42_RS19205;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=AL42_RS19205;old_locus_tag=AL42_02800 NZ_KK316784.1 Protein Homology CDS 2999002 2999466 . - 0 ID=cds-WP_003413930.1;Parent=gene-AL42_RS19205;Dbxref=GenBank:WP_003413930.1;Name=WP_003413930.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010908085.1;locus_tag=AL42_RS19205;product=dUTP diphosphatase;protein_id=WP_003413930.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2999492 2999977 . + . ID=gene-AL42_RS19210;Name=AL42_RS19210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19210;old_locus_tag=AL42_02801 NZ_KK316784.1 Protein Homology CDS 2999492 2999977 . + 0 ID=cds-WP_003413931.1;Parent=gene-AL42_RS19210;Dbxref=GenBank:WP_003413931.1;Name=WP_003413931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217214.1;locus_tag=AL42_RS19210;product=DUF3093 domain-containing protein;protein_id=WP_003413931.1;transl_table=11 NZ_KK316784.1 RefSeq gene 2999982 3000284 . - . ID=gene-AL42_RS19215;Name=AL42_RS19215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19215;old_locus_tag=AL42_02802 NZ_KK316784.1 Protein Homology CDS 2999982 3000284 . - 0 ID=cds-WP_003899437.1;Parent=gene-AL42_RS19215;Dbxref=GenBank:WP_003899437.1;Name=WP_003899437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217215.1;locus_tag=AL42_RS19215;product=DUF4193 domain-containing protein;protein_id=WP_003899437.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3000522 3001172 . + . ID=gene-AL42_RS19220;Name=cei;gbkey=Gene;gene=cei;gene_biotype=protein_coding;locus_tag=AL42_RS19220;old_locus_tag=AL42_02803 NZ_KK316784.1 Protein Homology CDS 3000522 3001172 . + 0 ID=cds-WP_003413937.1;Parent=gene-AL42_RS19220;Dbxref=GenBank:WP_003413937.1;Name=WP_003413937.1;gbkey=CDS;gene=cei;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217216.1;locus_tag=AL42_RS19220;product=envelope integrity protein Cei;protein_id=WP_003413937.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3001182 3002054 . - . ID=gene-AL42_RS19225;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=AL42_RS19225;old_locus_tag=AL42_02804 NZ_KK316784.1 Protein Homology CDS 3001182 3002054 . - 0 ID=cds-WP_003413939.1;Parent=gene-AL42_RS19225;Dbxref=GenBank:WP_003413939.1;Name=WP_003413939.1;gbkey=CDS;gene=suhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217217.1;locus_tag=AL42_RS19225;product=inositol-1-monophosphatase SuhB;protein_id=WP_003413939.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3002177 3002974 . + . ID=gene-AL42_RS19230;Name=ppgK;gbkey=Gene;gene=ppgK;gene_biotype=protein_coding;locus_tag=AL42_RS19230;old_locus_tag=AL42_02805 NZ_KK316784.1 Protein Homology CDS 3002177 3002974 . + 0 ID=cds-WP_003413941.1;Parent=gene-AL42_RS19230;Dbxref=GenBank:WP_003413941.1;Name=WP_003413941.1;Ontology_term=GO:0004340,GO:0047330;gbkey=CDS;gene=ppgK;go_function=glucokinase activity|0004340||IEA,polyphosphate-glucose phosphotransferase activity|0047330||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217218.1;locus_tag=AL42_RS19230;product=polyphosphate--glucose phosphotransferase;protein_id=WP_003413941.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3003154 3004740 . + . ID=gene-AL42_RS19235;Name=sigA;gbkey=Gene;gene=sigA;gene_biotype=protein_coding;locus_tag=AL42_RS19235;old_locus_tag=AL42_02806 NZ_KK316784.1 Protein Homology CDS 3003154 3004740 . + 0 ID=cds-WP_031721828.1;Parent=gene-AL42_RS19235;Dbxref=GenBank:WP_031721828.1;Name=WP_031721828.1;Ontology_term=GO:0006352,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=sigA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217219.1;locus_tag=AL42_RS19235;product=RNA polymerase sigma factor;protein_id=WP_031721828.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3004777 3005205 . + . ID=gene-AL42_RS19240;Name=AL42_RS19240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19240;old_locus_tag=AL42_02807 NZ_KK316784.1 Protein Homology CDS 3004777 3005205 . + 0 ID=cds-WP_003899440.1;Parent=gene-AL42_RS19240;Dbxref=GenBank:WP_003899440.1;Name=WP_003899440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217220.1;locus_tag=AL42_RS19240;product=RidA family protein;protein_id=WP_003899440.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3005133 3005522 . - . ID=gene-AL42_RS19245;Name=AL42_RS19245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19245;old_locus_tag=AL42_02808 NZ_KK316784.1 Protein Homology CDS 3005133 3005522 . - 0 ID=cds-WP_003413947.1;Parent=gene-AL42_RS19245;Dbxref=GenBank:WP_003413947.1;Name=WP_003413947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217221.1;locus_tag=AL42_RS19245;product=DUF952 domain-containing protein;protein_id=WP_003413947.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3005519 3005761 . - . ID=gene-AL42_RS26275;Name=AL42_RS26275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS26275;old_locus_tag=AL42_02809 NZ_KK316784.1 Protein Homology CDS 3005519 3005761 . - 0 ID=cds-WP_049955294.1;Parent=gene-AL42_RS26275;Dbxref=GenBank:WP_049955294.1;Name=WP_049955294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217222.1;locus_tag=AL42_RS26275;product=hypothetical protein;protein_id=WP_049955294.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3005714 3005830 . + . ID=gene-AL42_RS28170;Name=AL42_RS28170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS28170 NZ_KK316784.1 Protein Homology CDS 3005714 3005830 . + 0 ID=cds-WP_015456423.1;Parent=gene-AL42_RS28170;Dbxref=GenBank:WP_015456423.1;Name=WP_015456423.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048765.1;locus_tag=AL42_RS28170;product=DUF7455 domain-containing protein;protein_id=WP_015456423.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3005892 3006866 . + . ID=gene-AL42_RS19250;Name=AL42_RS19250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19250;old_locus_tag=AL42_02810 NZ_KK316784.1 Protein Homology CDS 3005892 3006866 . + 0 ID=cds-WP_003413953.1;Parent=gene-AL42_RS19250;Dbxref=GenBank:WP_003413953.1;Name=WP_003413953.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217223.1;locus_tag=AL42_RS19250;product=YihY/virulence factor BrkB family protein;protein_id=WP_003413953.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3006867 3007106 . - . ID=gene-AL42_RS19255;Name=AL42_RS19255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19255;old_locus_tag=AL42_02811 NZ_KK316784.1 Protein Homology CDS 3006867 3007106 . - 0 ID=cds-WP_003413954.1;Parent=gene-AL42_RS19255;Dbxref=GenBank:WP_003413954.1;Name=WP_003413954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008258553.1;locus_tag=AL42_RS19255;product=DUF3039 domain-containing protein;protein_id=WP_003413954.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3007158 3007595 . + . ID=gene-AL42_RS19260;Name=AL42_RS19260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19260;old_locus_tag=AL42_02812 NZ_KK316784.1 Protein Homology CDS 3007158 3007595 . + 0 ID=cds-WP_003910933.1;Parent=gene-AL42_RS19260;Dbxref=GenBank:WP_003910933.1;Name=WP_003910933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217225.1;locus_tag=AL42_RS19260;product=DUF3099 domain-containing protein;protein_id=WP_003910933.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3007771 3008742 . + . ID=gene-AL42_RS19265;Name=sigB;gbkey=Gene;gene=sigB;gene_biotype=protein_coding;locus_tag=AL42_RS19265;old_locus_tag=AL42_02813 NZ_KK316784.1 Protein Homology CDS 3007771 3008742 . + 0 ID=cds-WP_003413958.1;Parent=gene-AL42_RS19265;Dbxref=GenBank:WP_003413958.1;Name=WP_003413958.1;gbkey=CDS;gene=sigB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217226.1;locus_tag=AL42_RS19265;product=sigma-70 family RNA polymerase sigma factor SigB;protein_id=WP_003413958.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3008875 3009567 . + . ID=gene-AL42_RS19270;Name=ideR;gbkey=Gene;gene=ideR;gene_biotype=protein_coding;locus_tag=AL42_RS19270;old_locus_tag=AL42_02814 NZ_KK316784.1 Protein Homology CDS 3008875 3009567 . + 0 ID=cds-WP_003413962.1;Parent=gene-AL42_RS19270;Dbxref=GenBank:WP_003413962.1;Name=WP_003413962.1;gbkey=CDS;gene=ideR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217227.1;locus_tag=AL42_RS19270;product=iron-dependent transcriptional regulator IdeR;protein_id=WP_003413962.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3009580 3010638 . - . ID=gene-AL42_RS19275;Name=AL42_RS19275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19275;old_locus_tag=AL42_02815 NZ_KK316784.1 Protein Homology CDS 3009580 3010638 . - 0 ID=cds-WP_003905914.1;Parent=gene-AL42_RS19275;Dbxref=GenBank:WP_003905914.1;Name=WP_003905914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217228.1;locus_tag=AL42_RS19275;product=DUF4192 domain-containing protein;protein_id=WP_003905914.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3010751 3012157 . + . ID=gene-AL42_RS19280;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=AL42_RS19280;old_locus_tag=AL42_02816 NZ_KK316784.1 Protein Homology CDS 3010751 3012157 . + 0 ID=cds-WP_003900556.1;Parent=gene-AL42_RS19280;Dbxref=GenBank:WP_003900556.1;Name=WP_003900556.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (Si-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217229.1;locus_tag=AL42_RS19280;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=WP_003900556.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3012375 3013349 . + . ID=gene-AL42_RS19285;Name=AL42_RS19285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19285;old_locus_tag=AL42_02817 NZ_KK316784.1 Protein Homology CDS 3012375 3013349 . + 0 ID=cds-WP_003901455.1;Parent=gene-AL42_RS19285;Dbxref=GenBank:WP_003901455.1;Name=WP_003901455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217230.1;locus_tag=AL42_RS19285;product=proteasome assembly chaperone family protein;protein_id=WP_003901455.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3013408 3014433 . + . ID=gene-AL42_RS19290;Name=AL42_RS19290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19290;old_locus_tag=AL42_02818 NZ_KK316784.1 Protein Homology CDS 3013408 3014433 . + 0 ID=cds-WP_003900558.1;Parent=gene-AL42_RS19290;Dbxref=GenBank:WP_003900558.1;Name=WP_003900558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217231.1;locus_tag=AL42_RS19290;product=alpha/beta fold hydrolase;protein_id=WP_003900558.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3014482 3015168 . + . ID=gene-AL42_RS19295;Name=AL42_RS19295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19295;old_locus_tag=AL42_02819 NZ_KK316784.1 Protein Homology CDS 3014482 3015168 . + 0 ID=cds-WP_003413971.1;Parent=gene-AL42_RS19295;Dbxref=GenBank:WP_003413971.1;Name=WP_003413971.1;Ontology_term=GO:0009058,GO:0016853,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=isomerase activity|0016853||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217232.1;locus_tag=AL42_RS19295;product=PhzF family phenazine biosynthesis protein;protein_id=WP_003413971.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3015177 3015671 . - . ID=gene-AL42_RS19300;Name=AL42_RS19300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19300;old_locus_tag=AL42_02820 NZ_KK316784.1 Protein Homology CDS 3015177 3015671 . - 0 ID=cds-WP_003900559.1;Parent=gene-AL42_RS19300;Dbxref=GenBank:WP_003900559.1;Name=WP_003900559.1;Ontology_term=GO:0020037,GO:0046872,GO:0062213;gbkey=CDS;go_function=heme binding|0020037||IEA,metal ion binding|0046872||IEA,peroxynitrite isomerase activity|0062213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217233.1;locus_tag=AL42_RS19300;product=peroxynitrite isomerase;protein_id=WP_003900559.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3015723 3016187 . - . ID=gene-AL42_RS19305;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=AL42_RS19305;old_locus_tag=AL42_02821 NZ_KK316784.1 Protein Homology CDS 3015723 3016187 . - 0 ID=cds-WP_003413973.1;Parent=gene-AL42_RS19305;Dbxref=GenBank:WP_003413973.1;Name=WP_003413973.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217234.1;locus_tag=AL42_RS19305;product=transcriptional regulator NrdR;protein_id=WP_003413973.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3016350 3016847 . - . ID=gene-AL42_RS19310;Name=chiZ;gbkey=Gene;gene=chiZ;gene_biotype=protein_coding;locus_tag=AL42_RS19310;old_locus_tag=AL42_02822 NZ_KK316784.1 Protein Homology CDS 3016350 3016847 . - 0 ID=cds-WP_003413974.1;Parent=gene-AL42_RS19310;Dbxref=GenBank:WP_003413974.1;Name=WP_003413974.1;gbkey=CDS;gene=chiZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217235.1;locus_tag=AL42_RS19310;product=cell wall hydrolase ChiZ;protein_id=WP_003413974.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3017098 3017808 . + . ID=gene-AL42_RS19315;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=AL42_RS19315;old_locus_tag=AL42_02823 NZ_KK316784.1 Protein Homology CDS 3017098 3017808 . + 0 ID=cds-WP_003899448.1;Parent=gene-AL42_RS19315;Dbxref=GenBank:WP_003899448.1;Name=WP_003899448.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217236.2;locus_tag=AL42_RS19315;product=transcriptional repressor LexA;protein_id=WP_003899448.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3017830 3019929 . - . ID=gene-AL42_RS19320;Name=AL42_RS19320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19320;old_locus_tag=AL42_02824 NZ_KK316784.1 Protein Homology CDS 3017830 3019929 . - 0 ID=cds-WP_003900560.1;Parent=gene-AL42_RS19320;Dbxref=GenBank:WP_003900560.1;Name=WP_003900560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217237.1;locus_tag=AL42_RS19320;product=LGFP repeat-containing protein;protein_id=WP_003900560.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3019945 3020193 . + . ID=gene-AL42_RS19325;Name=AL42_RS19325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19325;old_locus_tag=AL42_02825 NZ_KK316784.1 Protein Homology CDS 3019945 3020193 . + 0 ID=cds-WP_003902343.1;Parent=gene-AL42_RS19325;Dbxref=GenBank:WP_003902343.1;Name=WP_003902343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217238.1;locus_tag=AL42_RS19325;product=hypothetical protein;protein_id=WP_003902343.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3020219 3021412 . + . ID=gene-AL42_RS19330;Name=AL42_RS19330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19330;old_locus_tag=AL42_02826 NZ_KK316784.1 Protein Homology CDS 3020219 3021412 . + 0 ID=cds-WP_003413979.1;Parent=gene-AL42_RS19330;Dbxref=GenBank:WP_003413979.1;Name=WP_003413979.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217239.1;locus_tag=AL42_RS19330;product=TerC/Alx family metal homeostasis membrane protein;protein_id=WP_003413979.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3021441 3022601 . - . ID=gene-AL42_RS19335;Name=AL42_RS19335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19335;old_locus_tag=AL42_02827 NZ_KK316784.1 Protein Homology CDS 3021441 3022601 . - 0 ID=cds-WP_003901456.1;Parent=gene-AL42_RS19335;Dbxref=GenBank:WP_003901456.1;Name=WP_003901456.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217240.1;locus_tag=AL42_RS19335;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003901456.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3022737 3024167 . - . ID=gene-AL42_RS19340;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=AL42_RS19340;old_locus_tag=AL42_02828 NZ_KK316784.1 Protein Homology CDS 3022737 3024167 . - 0 ID=cds-WP_003911950.1;Parent=gene-AL42_RS19340;Dbxref=GenBank:WP_003911950.1;Name=WP_003911950.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911950.1;locus_tag=AL42_RS19340;product=GTPase HflX;protein_id=WP_003911950.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3024241 3025110 . - . ID=gene-AL42_RS19345;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=AL42_RS19345;old_locus_tag=AL42_02829 NZ_KK316784.1 Protein Homology CDS 3024241 3025110 . - 0 ID=cds-WP_003413987.1;Parent=gene-AL42_RS19345;Dbxref=GenBank:WP_003413987.1;Name=WP_003413987.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217242.1;locus_tag=AL42_RS19345;product=diaminopimelate epimerase;protein_id=WP_003413987.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3025135 3026079 . - . ID=gene-AL42_RS19350;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=AL42_RS19350;old_locus_tag=AL42_02830 NZ_KK316784.1 Protein Homology CDS 3025135 3026079 . - 0 ID=cds-WP_003413989.1;Parent=gene-AL42_RS19350;Dbxref=GenBank:WP_003413989.1;Name=WP_003413989.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217243.1;locus_tag=AL42_RS19350;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_003413989.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3026076 3026771 . - . ID=gene-AL42_RS19355;Name=AL42_RS19355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19355;old_locus_tag=AL42_02831 NZ_KK316784.1 Protein Homology CDS 3026076 3026771 . - 0 ID=cds-WP_003899452.1;Parent=gene-AL42_RS19355;Dbxref=GenBank:WP_003899452.1;Name=WP_003899452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217244.1;locus_tag=AL42_RS19355;product=class III extradiol ring-cleavage dioxygenase family protein;protein_id=WP_003899452.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3026880 3027785 . - . ID=gene-AL42_RS19360;Name=AL42_RS19360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19360;old_locus_tag=AL42_02832 NZ_KK316784.1 Protein Homology CDS 3026880 3027785 . - 0 ID=cds-WP_003413995.1;Parent=gene-AL42_RS19360;Dbxref=GenBank:WP_003413995.1;Name=WP_003413995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217245.1;locus_tag=AL42_RS19360;product=DMT family transporter;protein_id=WP_003413995.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3027852 3028328 . + . ID=gene-AL42_RS19365;Name=AL42_RS19365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19365;old_locus_tag=AL42_02833 NZ_KK316784.1 Protein Homology CDS 3027852 3028328 . + 0 ID=cds-WP_003901458.1;Parent=gene-AL42_RS19365;Dbxref=GenBank:WP_003901458.1;Name=WP_003901458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217246.1;locus_tag=AL42_RS19365;product=hypothetical protein;protein_id=WP_003901458.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3028336 3029688 . + . ID=gene-AL42_RS19370;Name=AL42_RS19370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19370;old_locus_tag=AL42_02834 NZ_KK316784.1 Protein Homology CDS 3028336 3029688 . + 0 ID=cds-WP_003413997.1;Parent=gene-AL42_RS19370;Dbxref=GenBank:WP_003413997.1;Name=WP_003413997.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217247.1;locus_tag=AL42_RS19370;product=DUF349 domain-containing protein;protein_id=WP_003413997.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3029685 3030299 . - . ID=gene-AL42_RS19375;Name=AL42_RS19375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19375;old_locus_tag=AL42_02835 NZ_KK316784.1 Protein Homology CDS 3029685 3030299 . - 0 ID=cds-WP_003413999.1;Parent=gene-AL42_RS19375;Dbxref=GenBank:WP_003413999.1;Name=WP_003413999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217248.1;locus_tag=AL42_RS19375;product=Rv2732c family membrane protein;protein_id=WP_003413999.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3030296 3031834 . - . ID=gene-AL42_RS19380;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=AL42_RS19380;old_locus_tag=AL42_02836 NZ_KK316784.1 Protein Homology CDS 3030296 3031834 . - 0 ID=cds-WP_003414001.1;Parent=gene-AL42_RS19380;Dbxref=GenBank:WP_003414001.1;Name=WP_003414001.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217249.1;locus_tag=AL42_RS19380;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_003414001.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3032131 3032985 . + . ID=gene-AL42_RS26285;Name=AL42_RS26285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS26285;old_locus_tag=AL42_02837 NZ_KK316784.1 Protein Homology CDS 3032131 3032985 . + 0 ID=cds-WP_003899455.1;Parent=gene-AL42_RS26285;Dbxref=GenBank:WP_003899455.1;Name=WP_003899455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217250.1;locus_tag=AL42_RS26285;product=DUF5131 family protein;protein_id=WP_003899455.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3032870 3033862 . - . ID=gene-AL42_RS19385;Name=AL42_RS19385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19385;old_locus_tag=AL42_02838 NZ_KK316784.1 Protein Homology CDS 3032870 3033862 . - 0 ID=cds-WP_003899456.1;Parent=gene-AL42_RS19385;Dbxref=GenBank:WP_003899456.1;Name=WP_003899456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217251.1;locus_tag=AL42_RS19385;product=three-Cys-motif partner protein TcmP;protein_id=WP_003899456.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3033872 3034396 . - . ID=gene-AL42_RS19390;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=AL42_RS19390;old_locus_tag=AL42_02839 NZ_KK316784.1 Protein Homology CDS 3033872 3034396 . - 0 ID=cds-WP_003905919.1;Parent=gene-AL42_RS19390;Dbxref=GenBank:WP_003905919.1;Name=WP_003905919.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217252.1;locus_tag=AL42_RS19390;product=recombination regulator RecX;protein_id=WP_003905919.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3034362 3036734 . - . ID=gene-AL42_RS19395;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=AL42_RS19395;old_locus_tag=AL42_02840 NZ_KK316784.1 Protein Homology CDS 3034362 3036734 . - 0 ID=cds-WP_003414006.1;Parent=gene-AL42_RS19395;Dbxref=GenBank:WP_003414006.1;Name=WP_003414006.1;gbkey=CDS;gene=recA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217253.1;locus_tag=AL42_RS19395;product=intein-containing recombinase RecA;protein_id=WP_003414006.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3036929 3037102 . + . ID=gene-AL42_RS19400;Name=AL42_RS19400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19400;old_locus_tag=AL42_02841 NZ_KK316784.1 Protein Homology CDS 3036929 3037102 . + 0 ID=cds-WP_003414008.1;Parent=gene-AL42_RS19400;Dbxref=GenBank:WP_003414008.1;Name=WP_003414008.1;Ontology_term=GO:0051537;gbkey=CDS;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003414008.1;locus_tag=AL42_RS19400;product=(2Fe-2S)-binding protein;protein_id=WP_003414008.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3037116 3037310 . - . ID=gene-AL42_RS19405;Name=AL42_RS19405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19405;old_locus_tag=AL42_02842 NZ_KK316784.1 Protein Homology CDS 3037116 3037310 . - 0 ID=cds-WP_031680673.1;Parent=gene-AL42_RS19405;Dbxref=GenBank:WP_031680673.1;Name=WP_031680673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019513025.1;locus_tag=AL42_RS19405;product=DUF3046 domain-containing protein;protein_id=WP_031680673.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3037333 3038499 . - . ID=gene-AL42_RS19410;Name=AL42_RS19410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19410;old_locus_tag=AL42_02843 NZ_KK316784.1 Protein Homology CDS 3037333 3038499 . - 0 ID=cds-WP_003901461.1;Parent=gene-AL42_RS19410;Dbxref=GenBank:WP_003901461.1;Name=WP_003901461.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217255.1;locus_tag=AL42_RS19410;product=glycosyltransferase;protein_id=WP_003901461.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3038543 3038992 . + . ID=gene-AL42_RS19415;Name=ephG;gbkey=Gene;gene=ephG;gene_biotype=protein_coding;locus_tag=AL42_RS19415;old_locus_tag=AL42_02844 NZ_KK316784.1 Protein Homology CDS 3038543 3038992 . + 0 ID=cds-WP_003414015.1;Parent=gene-AL42_RS19415;Dbxref=GenBank:WP_003414015.1;Name=WP_003414015.1;gbkey=CDS;gene=ephG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217256.1;locus_tag=AL42_RS19415;product=epoxide hydrolase;protein_id=WP_003414015.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3039224 3040801 . + . ID=gene-AL42_RS19420;Name=AL42_RS19420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19420;old_locus_tag=AL42_02845 NZ_KK316784.1 Protein Homology CDS 3039224 3040801 . + 0 ID=cds-WP_014848111.1;Parent=gene-AL42_RS19420;Dbxref=GenBank:WP_014848111.1;Name=WP_014848111.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177902.1;locus_tag=AL42_RS19420;product=PE family protein;protein_id=WP_014848111.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 3040825 3041039 . - . ID=gene-AL42_RS27260;Name=AL42_RS27260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS27260;pseudo=true NZ_KK316784.1 Protein Homology CDS 3040825 3041039 . - 0 ID=cds-AL42_RS27260;Parent=gene-AL42_RS27260;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007172553.1;locus_tag=AL42_RS27260;product=DUF3046 domain-containing protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 3041116 3041325 . + . ID=gene-AL42_RS27265;Name=AL42_RS27265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27265 NZ_KK316784.1 Protein Homology CDS 3041116 3041325 . + 0 ID=cds-WP_003918495.1;Parent=gene-AL42_RS27265;Dbxref=GenBank:WP_003918495.1;Name=WP_003918495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003918495.1;locus_tag=AL42_RS27265;product=limonene-1%2C2-epoxide hydrolase family protein;protein_id=WP_003918495.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3041329 3041733 . + . ID=gene-AL42_RS27270;Name=AL42_RS27270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27270 NZ_KK316784.1 Protein Homology CDS 3041329 3041733 . + 0 ID=cds-WP_003912838.1;Parent=gene-AL42_RS27270;Dbxref=GenBank:WP_003912838.1;Name=WP_003912838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631471.1;locus_tag=AL42_RS27270;product=DUF5313 domain-containing protein;protein_id=WP_003912838.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3041730 3042542 . - . ID=gene-AL42_RS19430;Name=pspM;gbkey=Gene;gene=pspM;gene_biotype=protein_coding;locus_tag=AL42_RS19430;old_locus_tag=AL42_02847 NZ_KK316784.1 Protein Homology CDS 3041730 3042542 . - 0 ID=cds-WP_003414026.1;Parent=gene-AL42_RS19430;Dbxref=GenBank:WP_003414026.1;Name=WP_003414026.1;gbkey=CDS;gene=pspM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217259.1;locus_tag=AL42_RS19430;product=phage shock envelope stress response protein PspM;protein_id=WP_003414026.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3042561 3043373 . - . ID=gene-AL42_RS19435;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=AL42_RS19435;old_locus_tag=AL42_02848 NZ_KK316784.1 Protein Homology CDS 3042561 3043373 . - 0 ID=cds-WP_003414030.1;Parent=gene-AL42_RS19435;Dbxref=GenBank:WP_003414030.1;Name=WP_003414030.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177903.1;locus_tag=AL42_RS19435;product=phage shock protein PspA;protein_id=WP_003414030.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3043503 3043841 . - . ID=gene-AL42_RS19440;Name=clgR;gbkey=Gene;gene=clgR;gene_biotype=protein_coding;locus_tag=AL42_RS19440;old_locus_tag=AL42_02849 NZ_KK316784.1 Protein Homology CDS 3043503 3043841 . - 0 ID=cds-WP_003414032.1;Parent=gene-AL42_RS19440;Dbxref=GenBank:WP_003414032.1;Name=WP_003414032.1;gbkey=CDS;gene=clgR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217261.1;locus_tag=AL42_RS19440;product=transcriptional regulator ClgR;protein_id=WP_003414032.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3043912 3044511 . - . ID=gene-AL42_RS19445;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=AL42_RS19445;old_locus_tag=AL42_02850 NZ_KK316784.1 Protein Homology CDS 3043912 3044511 . - 0 ID=cds-WP_003911983.1;Parent=gene-AL42_RS19445;Dbxref=GenBank:WP_003911983.1;Name=WP_003911983.1;Ontology_term=GO:0008654,GO:0008444,GO:0016020;gbkey=CDS;gene=pgsA;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911983.1;locus_tag=AL42_RS19445;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_003911983.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3044572 3045096 . + . ID=gene-AL42_RS19450;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=AL42_RS19450;old_locus_tag=AL42_02851 NZ_KK316784.1 Protein Homology CDS 3044572 3045096 . + 0 ID=cds-WP_003414037.1;Parent=gene-AL42_RS19450;Dbxref=GenBank:WP_003414037.1;Name=WP_003414037.1;Ontology_term=GO:0006526,GO:0008080;gbkey=CDS;gene=argA;go_function=N-acetyltransferase activity|0008080||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217263.1;locus_tag=AL42_RS19450;product=amino-acid N-acetyltransferase;protein_id=WP_003414037.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3045165 3047816 . - . ID=gene-AL42_RS19455;Name=ftsK;gbkey=Gene;gene=ftsK;gene_biotype=protein_coding;locus_tag=AL42_RS19455;old_locus_tag=AL42_02852 NZ_KK316784.1 Protein Homology CDS 3045165 3047816 . - 0 ID=cds-WP_003414040.1;Parent=gene-AL42_RS19455;Dbxref=GenBank:WP_003414040.1;Name=WP_003414040.1;Ontology_term=GO:0007059,GO:0051301,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=ftsK;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=chromosome segregation|0007059||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217264.1;locus_tag=AL42_RS19455;product=DNA translocase FtsK;protein_id=WP_003414040.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3047815 3048129 . + . ID=gene-AL42_RS19460;Name=AL42_RS19460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19460;old_locus_tag=AL42_02853 NZ_KK316784.1 Protein Homology CDS 3047815 3048129 . + 0 ID=cds-WP_003414042.1;Parent=gene-AL42_RS19460;Dbxref=GenBank:WP_003414042.1;Name=WP_003414042.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217265.1;locus_tag=AL42_RS19460;product=putative quinol monooxygenase;protein_id=WP_003414042.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3048126 3048944 . + . ID=gene-AL42_RS19465;Name=AL42_RS19465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19465;old_locus_tag=AL42_02854 NZ_KK316784.1 Protein Homology CDS 3048126 3048944 . + 0 ID=cds-WP_003414045.1;Parent=gene-AL42_RS19465;Dbxref=GenBank:WP_003414045.1;Name=WP_003414045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217266.1;locus_tag=AL42_RS19465;product=Rv2750 family mycofactocin-dependent SDR oxidoreductase;protein_id=WP_003414045.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3048948 3049838 . + . ID=gene-AL42_RS19470;Name=AL42_RS19470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19470;old_locus_tag=AL42_02855 NZ_KK316784.1 Protein Homology CDS 3048948 3049838 . + 0 ID=cds-WP_003899463.1;Parent=gene-AL42_RS19470;Dbxref=GenBank:WP_003899463.1;Name=WP_003899463.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217267.1;locus_tag=AL42_RS19470;product=class I SAM-dependent methyltransferase;protein_id=WP_003899463.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3049825 3051501 . - . ID=gene-AL42_RS19475;Name=rnj;gbkey=Gene;gene=rnj;gene_biotype=protein_coding;locus_tag=AL42_RS19475;old_locus_tag=AL42_02856 NZ_KK316784.1 Protein Homology CDS 3049825 3051501 . - 0 ID=cds-WP_003414049.1;Parent=gene-AL42_RS19475;Dbxref=GenBank:WP_003414049.1;Name=WP_003414049.1;gbkey=CDS;gene=rnj;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217268.1;locus_tag=AL42_RS19475;product=ribonuclease J;protein_id=WP_003414049.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3051532 3052434 . - . ID=gene-AL42_RS19480;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=AL42_RS19480;old_locus_tag=AL42_02857 NZ_KK316784.1 Protein Homology CDS 3051532 3052434 . - 0 ID=cds-WP_003900564.1;Parent=gene-AL42_RS19480;Dbxref=GenBank:WP_003900564.1;Name=WP_003900564.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217269.1;locus_tag=AL42_RS19480;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_003900564.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3052503 3053255 . - . ID=gene-AL42_RS19485;Name=thyX;gbkey=Gene;gene=thyX;gene_biotype=protein_coding;locus_tag=AL42_RS19485;old_locus_tag=AL42_02858 NZ_KK316784.1 Protein Homology CDS 3052503 3053255 . - 0 ID=cds-WP_003899465.1;Parent=gene-AL42_RS19485;Dbxref=GenBank:WP_003899465.1;Name=WP_003899465.1;Ontology_term=GO:0006231,GO:0050660,GO:0050797;gbkey=CDS;gene=thyX;go_function=flavin adenine dinucleotide binding|0050660||IEA,thymidylate synthase (FAD) activity|0050797||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217270.1;locus_tag=AL42_RS19485;product=FAD-dependent thymidylate synthase;protein_id=WP_003899465.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3053499 3053774 . - . ID=gene-AL42_RS19490;Name=AL42_RS19490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19490;old_locus_tag=AL42_02859 NZ_KK316784.1 Protein Homology CDS 3053499 3053774 . - 0 ID=cds-WP_003414055.1;Parent=gene-AL42_RS19490;Dbxref=GenBank:WP_003414055.1;Name=WP_003414055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015293900.1;locus_tag=AL42_RS19490;product=restriction endonuclease subunit S domain-containing protein;protein_id=WP_003414055.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3053771 3055393 . - . ID=gene-AL42_RS19495;Name=hsdM;gbkey=Gene;gene=hsdM;gene_biotype=protein_coding;locus_tag=AL42_RS19495;old_locus_tag=AL42_02860 NZ_KK316784.1 Protein Homology CDS 3053771 3055393 . - 0 ID=cds-WP_003414057.1;Parent=gene-AL42_RS19495;Dbxref=GenBank:WP_003414057.1;Name=WP_003414057.1;gbkey=CDS;gene=hsdM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217272.1;locus_tag=AL42_RS19495;product=class I SAM-dependent DNA methyltransferase;protein_id=WP_003414057.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3055480 3055896 . - . ID=gene-AL42_RS19500;Name=vapC21;gbkey=Gene;gene=vapC21;gene_biotype=protein_coding;locus_tag=AL42_RS19500;old_locus_tag=AL42_02861 NZ_KK316784.1 Protein Homology CDS 3055480 3055896 . - 0 ID=cds-WP_003414059.1;Parent=gene-AL42_RS19500;Dbxref=GenBank:WP_003414059.1;Name=WP_003414059.1;gbkey=CDS;gene=vapC21;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217273.1;locus_tag=AL42_RS19500;product=type II toxin-antitoxin system toxin ribonuclease C21;protein_id=WP_003414059.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3055893 3056159 . - . ID=gene-AL42_RS19505;Name=AL42_RS19505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19505;old_locus_tag=AL42_02862 NZ_KK316784.1 Protein Homology CDS 3055893 3056159 . - 0 ID=cds-WP_003414061.1;Parent=gene-AL42_RS19505;Dbxref=GenBank:WP_003414061.1;Name=WP_003414061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217274.1;locus_tag=AL42_RS19505;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_003414061.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3056185 3056580 . - . ID=gene-AL42_RS19510;Name=AL42_RS19510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19510;old_locus_tag=AL42_02863 NZ_KK316784.1 Protein Homology CDS 3056185 3056580 . - 0 ID=cds-WP_003414064.1;Parent=gene-AL42_RS19510;Dbxref=GenBank:WP_003414064.1;Name=WP_003414064.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217275.1;locus_tag=AL42_RS19510;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003414064.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3056577 3056846 . - . ID=gene-AL42_RS19515;Name=AL42_RS19515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19515;old_locus_tag=AL42_02864 NZ_KK316784.1 Protein Homology CDS 3056577 3056846 . - 0 ID=cds-WP_003414066.1;Parent=gene-AL42_RS19515;Dbxref=GenBank:WP_003414066.1;Name=WP_003414066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217276.1;locus_tag=AL42_RS19515;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_003414066.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3056856 3057950 . - . ID=gene-AL42_RS19520;Name=hsdS;gbkey=Gene;gene=hsdS;gene_biotype=protein_coding;locus_tag=AL42_RS19520;old_locus_tag=AL42_02865 NZ_KK316784.1 Protein Homology CDS 3056856 3057950 . - 0 ID=cds-WP_003414068.1;Parent=gene-AL42_RS19520;Dbxref=GenBank:WP_003414068.1;Name=WP_003414068.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;gene=hsdS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217277.1;locus_tag=AL42_RS19520;product=restriction endonuclease subunit S;protein_id=WP_003414068.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3057947 3058366 . - . ID=gene-AL42_RS19525;Name=AL42_RS19525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19525;old_locus_tag=AL42_02866 NZ_KK316784.1 Protein Homology CDS 3057947 3058366 . - 0 ID=cds-WP_003414070.1;Parent=gene-AL42_RS19525;Dbxref=GenBank:WP_003414070.1;Name=WP_003414070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217278.1;locus_tag=AL42_RS19525;product=winged helix DNA-binding domain-containing protein;protein_id=WP_003414070.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3058440 3058919 . - . ID=gene-AL42_RS19530;Name=dfrA;gbkey=Gene;gene=dfrA;gene_biotype=protein_coding;locus_tag=AL42_RS19530;old_locus_tag=AL42_02867 NZ_KK316784.1 Protein Homology CDS 3058440 3058919 . - 0 ID=cds-WP_003414073.1;Parent=gene-AL42_RS19530;Dbxref=GenBank:WP_003414073.1;Name=WP_003414073.1;Ontology_term=GO:0004146;gbkey=CDS;gene=dfrA;go_function=dihydrofolate reductase activity|0004146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217279.1;locus_tag=AL42_RS19530;product=dihydrofolate reductase;protein_id=WP_003414073.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3058990 3059790 . - . ID=gene-AL42_RS19535;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=AL42_RS19535;old_locus_tag=AL42_02868 NZ_KK316784.1 Protein Homology CDS 3058990 3059790 . - 0 ID=cds-WP_003911953.1;Parent=gene-AL42_RS19535;Dbxref=GenBank:WP_003911953.1;Name=WP_003911953.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003875188.1;locus_tag=AL42_RS19535;product=thymidylate synthase;protein_id=WP_003911953.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3059946 3060683 . + . ID=gene-AL42_RS19540;Name=AL42_RS19540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19540;old_locus_tag=AL42_02869 NZ_KK316784.1 Protein Homology CDS 3059946 3060683 . + 0 ID=cds-WP_003414079.1;Parent=gene-AL42_RS19540;Dbxref=GenBank:WP_003414079.1;Name=WP_003414079.1;Ontology_term=GO:0016787,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217281.1;locus_tag=AL42_RS19540;product=dienelactone hydrolase family protein;protein_id=WP_003414079.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3060898 3061680 . - . ID=gene-AL42_RS19545;Name=AL42_RS19545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19545;old_locus_tag=AL42_02870 NZ_KK316784.1 Protein Homology CDS 3060898 3061680 . - 0 ID=cds-WP_003414081.1;Parent=gene-AL42_RS19545;Dbxref=GenBank:WP_003414081.1;Name=WP_003414081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177905.1;locus_tag=AL42_RS19545;product=SDR family oxidoreductase;protein_id=WP_003414081.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3061677 3062030 . - . ID=gene-AL42_RS26295;Name=AL42_RS26295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS26295;old_locus_tag=AL42_02871 NZ_KK316784.1 Protein Homology CDS 3061677 3062030 . - 0 ID=cds-WP_003900567.1;Parent=gene-AL42_RS26295;Dbxref=GenBank:WP_003900567.1;Name=WP_003900567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217283.1;locus_tag=AL42_RS26295;product=hypothetical protein;protein_id=WP_003900567.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3061913 3062203 . - . ID=gene-AL42_RS27705;Name=AL42_RS27705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27705 NZ_KK316784.1 Protein Homology CDS 3061913 3062203 . - 0 ID=cds-WP_003899467.1;Parent=gene-AL42_RS27705;Dbxref=GenBank:WP_003899467.1;Name=WP_003899467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003414083.1;locus_tag=AL42_RS27705;product=hypothetical protein;protein_id=WP_003899467.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3062204 3063388 . - . ID=gene-AL42_RS19550;Name=AL42_RS19550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19550;old_locus_tag=AL42_02872 NZ_KK316784.1 Protein Homology CDS 3062204 3063388 . - 0 ID=cds-WP_003900568.1;Parent=gene-AL42_RS19550;Dbxref=GenBank:WP_003900568.1;Name=WP_003900568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177906.1;locus_tag=AL42_RS19550;product=PPE family protein;protein_id=WP_003900568.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3063468 3064295 . - . ID=gene-AL42_RS19555;Name=AL42_RS19555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19555;old_locus_tag=AL42_02873 NZ_KK316784.1 Protein Homology CDS 3063468 3064295 . - 0 ID=cds-WP_003899469.1;Parent=gene-AL42_RS19555;Dbxref=GenBank:WP_003899469.1;Name=WP_003899469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177907.1;locus_tag=AL42_RS19555;product=PPE family protein%2C SVP subgroup;protein_id=WP_003899469.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3064619 3065767 . - . ID=gene-AL42_RS19560;Name=AL42_RS19560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19560;old_locus_tag=AL42_02874 NZ_KK316784.1 Protein Homology CDS 3064619 3065767 . - 0 ID=cds-WP_003414088.1;Parent=gene-AL42_RS19560;Dbxref=GenBank:WP_003414088.1;Name=WP_003414088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177677.1;locus_tag=AL42_RS19560;product=PPE family protein;protein_id=WP_003414088.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3065891 3066343 . - . ID=gene-AL42_RS19565;Name=AL42_RS19565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19565;old_locus_tag=AL42_02875 NZ_KK316784.1 Protein Homology CDS 3065891 3066343 . - 0 ID=cds-WP_003414091.1;Parent=gene-AL42_RS19565;Dbxref=GenBank:WP_003414091.1;Name=WP_003414091.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217287.1;locus_tag=AL42_RS19565;product=flavodoxin family protein;protein_id=WP_003414091.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3066429 3066902 . - . ID=gene-AL42_RS19570;Name=AL42_RS19570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19570;old_locus_tag=AL42_02876 NZ_KK316784.1 Protein Homology CDS 3066429 3066902 . - 0 ID=cds-WP_003414097.1;Parent=gene-AL42_RS19570;Dbxref=GenBank:WP_003414097.1;Name=WP_003414097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217288.1;locus_tag=AL42_RS19570;product=hypothetical protein;protein_id=WP_003414097.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3066914 3067651 . - . ID=gene-AL42_RS19575;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=AL42_RS19575;old_locus_tag=AL42_02877 NZ_KK316784.1 Protein Homology CDS 3066914 3067651 . - 0 ID=cds-WP_003414099.1;Parent=gene-AL42_RS19575;Dbxref=GenBank:WP_003414099.1;Name=WP_003414099.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217289.1;locus_tag=AL42_RS19575;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_003414099.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3067662 3068066 . - . ID=gene-AL42_RS19580;Name=AL42_RS19580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19580;old_locus_tag=AL42_02878 NZ_KK316784.1 Protein Homology CDS 3067662 3068066 . - 0 ID=cds-WP_003900570.1;Parent=gene-AL42_RS19580;Dbxref=GenBank:WP_003900570.1;Name=WP_003900570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217290.1;locus_tag=AL42_RS19580;product=hypothetical protein;protein_id=WP_003900570.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3068123 3068680 . + . ID=gene-AL42_RS19585;Name=AL42_RS19585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19585;old_locus_tag=AL42_02879 NZ_KK316784.1 Protein Homology CDS 3068123 3068680 . + 0 ID=cds-WP_003899472.1;Parent=gene-AL42_RS19585;Dbxref=GenBank:WP_003899472.1;Name=WP_003899472.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899472.1;locus_tag=AL42_RS19585;product=GNAT family N-acetyltransferase;protein_id=WP_003899472.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3068684 3069775 . - . ID=gene-AL42_RS19590;Name=AL42_RS19590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19590;old_locus_tag=AL42_02880 NZ_KK316784.1 Protein Homology CDS 3068684 3069775 . - 0 ID=cds-WP_003900572.1;Parent=gene-AL42_RS19590;Dbxref=GenBank:WP_003900572.1;Name=WP_003900572.1;Ontology_term=GO:0010181,GO:0016491,GO:0046872,GO:0051537;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900572.1;locus_tag=AL42_RS19590;product=PDR/VanB family oxidoreductase;protein_id=WP_003900572.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3069795 3070865 . - . ID=gene-AL42_RS19595;Name=AL42_RS19595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19595;old_locus_tag=AL42_02881 NZ_KK316784.1 Protein Homology CDS 3069795 3070865 . - 0 ID=cds-WP_003414107.1;Parent=gene-AL42_RS19595;Dbxref=GenBank:WP_003414107.1;Name=WP_003414107.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217293.1;locus_tag=AL42_RS19595;product=metal-dependent hydrolase;protein_id=WP_003414107.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3071023 3071493 . - . ID=gene-AL42_RS19600;Name=AL42_RS19600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19600;old_locus_tag=AL42_02882 NZ_KK316784.1 Protein Homology CDS 3071023 3071493 . - 0 ID=cds-WP_003899475.1;Parent=gene-AL42_RS19600;Dbxref=GenBank:WP_003899475.1;Name=WP_003899475.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217294.1;locus_tag=AL42_RS19600;product=SRPBCC family protein;protein_id=WP_003899475.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3071525 3072040 . - . ID=gene-AL42_RS19605;Name=AL42_RS19605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19605;old_locus_tag=AL42_02883 NZ_KK316784.1 Protein Homology CDS 3071525 3072040 . - 0 ID=cds-WP_009939105.1;Parent=gene-AL42_RS19605;Dbxref=GenBank:WP_009939105.1;Name=WP_009939105.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009939105.1;locus_tag=AL42_RS19605;product=HTH-type transcriptional regulator AldR;protein_id=WP_009939105.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3072130 3073245 . + . ID=gene-AL42_RS19610;Name=ald;gbkey=Gene;gene=ald;gene_biotype=protein_coding;locus_tag=AL42_RS19610;old_locus_tag=AL42_02884 NZ_KK316784.1 Protein Homology CDS 3072130 3073245 . + 0 ID=cds-WP_003899477.1;Parent=gene-AL42_RS19610;Dbxref=GenBank:WP_003899477.1;Name=WP_003899477.1;Ontology_term=GO:0042853,GO:0000286;gbkey=CDS;gene=ald;go_function=alanine dehydrogenase activity|0000286||IEA;go_process=L-alanine catabolic process|0042853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217296.1;locus_tag=AL42_RS19610;product=alanine dehydrogenase;protein_id=WP_003899477.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3073260 3074294 . - . ID=gene-AL42_RS19615;Name=AL42_RS19615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19615;old_locus_tag=AL42_02885 NZ_KK316784.1 Protein Homology CDS 3073260 3074294 . - 0 ID=cds-WP_003899478.1;Parent=gene-AL42_RS19615;Dbxref=GenBank:WP_003899478.1;Name=WP_003899478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217297.1;locus_tag=AL42_RS19615;product=nitronate monooxygenase;protein_id=WP_003899478.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3074355 3075671 . - . ID=gene-AL42_RS19620;Name=pepR;gbkey=Gene;gene=pepR;gene_biotype=protein_coding;locus_tag=AL42_RS19620;old_locus_tag=AL42_02886 NZ_KK316784.1 Protein Homology CDS 3074355 3075671 . - 0 ID=cds-WP_003414119.1;Parent=gene-AL42_RS19620;Dbxref=GenBank:WP_003414119.1;Name=WP_003414119.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;gene=pepR;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217298.1;locus_tag=AL42_RS19620;product=M16 family metallopeptidase;protein_id=WP_003414119.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3075649 3077907 . - . ID=gene-AL42_RS19625;Name=gpsI;gbkey=Gene;gene=gpsI;gene_biotype=protein_coding;locus_tag=AL42_RS19625;old_locus_tag=AL42_02887 NZ_KK316784.1 Protein Homology CDS 3075649 3077907 . - 0 ID=cds-WP_003414124.1;Parent=gene-AL42_RS19625;Dbxref=GenBank:WP_003414124.1;Name=WP_003414124.1;Ontology_term=GO:0006396,GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=gpsI;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=RNA processing|0006396||IEA,mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217299.1;locus_tag=AL42_RS19625;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_003414124.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3078261 3078776 . - . ID=gene-AL42_RS19630;Name=lppU;gbkey=Gene;gene=lppU;gene_biotype=protein_coding;locus_tag=AL42_RS19630;old_locus_tag=AL42_02888 NZ_KK316784.1 Protein Homology CDS 3078261 3078776 . - 0 ID=cds-WP_003899480.1;Parent=gene-AL42_RS19630;Dbxref=GenBank:WP_003899480.1;Name=WP_003899480.1;gbkey=CDS;gene=lppU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217300.1;locus_tag=AL42_RS19630;product=LppU family putative lipoprotein;protein_id=WP_003899480.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3078789 3079058 . - . ID=gene-AL42_RS19635;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=AL42_RS19635;old_locus_tag=AL42_02889 NZ_KK316784.1 Protein Homology CDS 3078789 3079058 . - 0 ID=cds-WP_003414128.1;Parent=gene-AL42_RS19635;Dbxref=GenBank:WP_003414128.1;Name=WP_003414128.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011559497.1;locus_tag=AL42_RS19635;product=30S ribosomal protein S15;protein_id=WP_003414128.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3079215 3080189 . - . ID=gene-AL42_RS19640;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=AL42_RS19640;old_locus_tag=AL42_02890 NZ_KK316784.1 Protein Homology CDS 3079215 3080189 . - 0 ID=cds-WP_003911989.1;Parent=gene-AL42_RS19640;Dbxref=GenBank:WP_003911989.1;Name=WP_003911989.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911989.1;locus_tag=AL42_RS19640;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_003911989.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3080421 3082184 . + . ID=gene-AL42_RS19645;Name=AL42_RS19645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19645;old_locus_tag=AL42_02891 NZ_KK316784.1 Protein Homology CDS 3080421 3082184 . + 0 ID=cds-WP_003414134.1;Parent=gene-AL42_RS19645;Dbxref=GenBank:WP_003414134.1;Name=WP_003414134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217303.1;locus_tag=AL42_RS19645;product=nucleotide-binding protein;protein_id=WP_003414134.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3082269 3082955 . + . ID=gene-AL42_RS19650;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=AL42_RS19650;old_locus_tag=AL42_02892 NZ_KK316784.1 Protein Homology CDS 3082269 3082955 . + 0 ID=cds-WP_003414136.1;Parent=gene-AL42_RS19650;Dbxref=GenBank:WP_003414136.1;Name=WP_003414136.1;gbkey=CDS;gene=mntR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217304.1;locus_tag=AL42_RS19650;product=manganese-binding transcriptional regulator MntR;protein_id=WP_003414136.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3083016 3084248 . - . ID=gene-AL42_RS19655;Name=AL42_RS19655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19655;old_locus_tag=AL42_02893 NZ_KK316784.1 Protein Homology CDS 3083016 3084248 . - 0 ID=cds-WP_003414139.1;Parent=gene-AL42_RS19655;Dbxref=GenBank:WP_003414139.1;Name=WP_003414139.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217305.1;locus_tag=AL42_RS19655;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003414139.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3084274 3085479 . - . ID=gene-AL42_RS19660;Name=AL42_RS19660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19660;old_locus_tag=AL42_02894 NZ_KK316784.1 Protein Homology CDS 3084274 3085479 . - 0 ID=cds-WP_003414142.1;Parent=gene-AL42_RS19660;Dbxref=GenBank:WP_003414142.1;Name=WP_003414142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217306.3;locus_tag=AL42_RS19660;product=lipid-transfer protein;protein_id=WP_003414142.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3085512 3086891 . - . ID=gene-AL42_RS19665;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AL42_RS19665;old_locus_tag=AL42_02895 NZ_KK316784.1 Protein Homology CDS 3085512 3086891 . - 0 ID=cds-WP_003899482.1;Parent=gene-AL42_RS19665;Dbxref=GenBank:WP_003899482.1;Name=WP_003899482.1;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217307.1;locus_tag=AL42_RS19665;product=IS607 family element RNA-guided endonuclease TnpB;protein_id=WP_003899482.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3086891 3087472 . - . ID=gene-AL42_RS19670;Name=AL42_RS19670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19670;old_locus_tag=AL42_02896 NZ_KK316784.1 Protein Homology CDS 3086891 3087472 . - 0 ID=cds-WP_003414146.1;Parent=gene-AL42_RS19670;Dbxref=GenBank:WP_003414146.1;Name=WP_003414146.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217308.1;locus_tag=AL42_RS19670;product=IS607-like element IS1602 family transposase;protein_id=WP_003414146.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3087674 3088570 . - . ID=gene-AL42_RS19675;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=AL42_RS19675;old_locus_tag=AL42_02897 NZ_KK316784.1 Protein Homology CDS 3087674 3088570 . - 0 ID=cds-WP_003414147.1;Parent=gene-AL42_RS19675;Dbxref=GenBank:WP_003414147.1;Name=WP_003414147.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217309.1;locus_tag=AL42_RS19675;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_003414147.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3088567 3089250 . - . ID=gene-AL42_RS19680;Name=pptT;gbkey=Gene;gene=pptT;gene_biotype=protein_coding;locus_tag=AL42_RS19680;old_locus_tag=AL42_02898 NZ_KK316784.1 Protein Homology CDS 3088567 3089250 . - 0 ID=cds-WP_003414149.1;Parent=gene-AL42_RS19680;Dbxref=GenBank:WP_003414149.1;Name=WP_003414149.1;gbkey=CDS;gene=pptT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217310.1;locus_tag=AL42_RS19680;product=4'-phosphopantetheinyl transferase;protein_id=WP_003414149.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3089247 3090221 . - . ID=gene-AL42_RS19685;Name=AL42_RS19685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19685;old_locus_tag=AL42_02899 NZ_KK316784.1 Protein Homology CDS 3089247 3090221 . - 0 ID=cds-WP_003414151.1;Parent=gene-AL42_RS19685;Dbxref=GenBank:WP_003414151.1;Name=WP_003414151.1;Ontology_term=GO:0016787,GO:0042578,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217311.1;locus_tag=AL42_RS19685;product=metallophosphoesterase family protein;protein_id=WP_003414151.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3090366 3090929 . - . ID=gene-AL42_RS19690;Name=lppV;gbkey=Gene;gene=lppV;gene_biotype=protein_coding;locus_tag=AL42_RS19690;old_locus_tag=AL42_02900 NZ_KK316784.1 Protein Homology CDS 3090366 3090929 . - 0 ID=cds-WP_003900574.1;Parent=gene-AL42_RS19690;Dbxref=GenBank:WP_003900574.1;Name=WP_003900574.1;gbkey=CDS;gene=lppV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217312.1;locus_tag=AL42_RS19690;product=LppA family lipoprotein;protein_id=WP_003900574.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3090929 3092617 . - . ID=gene-AL42_RS19695;Name=AL42_RS19695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19695;old_locus_tag=AL42_02901 NZ_KK316784.1 Protein Homology CDS 3090929 3092617 . - 0 ID=cds-WP_003414155.1;Parent=gene-AL42_RS19695;Dbxref=GenBank:WP_003414155.1;Name=WP_003414155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217313.1;locus_tag=AL42_RS19695;product=alpha/beta hydrolase family protein;protein_id=WP_003414155.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3092621 3092947 . - . ID=gene-AL42_RS19700;Name=AL42_RS19700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19700;old_locus_tag=AL42_02902 NZ_KK316784.1 Protein Homology CDS 3092621 3092947 . - 0 ID=cds-WP_003414157.1;Parent=gene-AL42_RS19700;Dbxref=GenBank:WP_003414157.1;Name=WP_003414157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217314.1;locus_tag=AL42_RS19700;product=hypothetical protein;protein_id=WP_003414157.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3093120 3093707 . + . ID=gene-AL42_RS19705;Name=AL42_RS19705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19705;old_locus_tag=AL42_02903 NZ_KK316784.1 Protein Homology CDS 3093120 3093707 . + 0 ID=cds-WP_003914429.1;Parent=gene-AL42_RS19705;Dbxref=GenBank:WP_003914429.1;Name=WP_003914429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009978043.1;locus_tag=AL42_RS19705;product=DUF3558 domain-containing protein;protein_id=WP_003914429.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3093726 3095375 . + . ID=gene-AL42_RS19710;Name=AL42_RS19710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19710;old_locus_tag=AL42_02904 NZ_KK316784.1 Protein Homology CDS 3093726 3095375 . + 0 ID=cds-WP_003899485.1;Parent=gene-AL42_RS19710;Dbxref=GenBank:WP_003899485.1;Name=WP_003899485.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217316.1;locus_tag=AL42_RS19710;product=CocE/NonD family hydrolase;protein_id=WP_003899485.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3095477 3095833 . - . ID=gene-AL42_RS19715;Name=mazF9;gbkey=Gene;gene=mazF9;gene_biotype=protein_coding;gene_synonym=mazF-mt1;locus_tag=AL42_RS19715;old_locus_tag=AL42_02905 NZ_KK316784.1 Protein Homology CDS 3095477 3095833 . - 0 ID=cds-WP_003414166.1;Parent=gene-AL42_RS19715;Dbxref=GenBank:WP_003414166.1;Name=WP_003414166.1;gbkey=CDS;gene=mazF9;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217317.1;locus_tag=AL42_RS19715;product=type II toxin-antitoxin system toxin endoribonuclease MazF9;protein_id=WP_003414166.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3095817 3096047 . - . ID=gene-AL42_RS19720;Name=mazE9;gbkey=Gene;gene=mazE9;gene_biotype=protein_coding;locus_tag=AL42_RS19720;old_locus_tag=AL42_02906 NZ_KK316784.1 Protein Homology CDS 3095817 3096047 . - 0 ID=cds-WP_003901465.1;Parent=gene-AL42_RS19720;Dbxref=GenBank:WP_003901465.1;Name=WP_003901465.1;gbkey=CDS;gene=mazE9;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007411507.1;locus_tag=AL42_RS19720;product=type II toxin-antitoxin system antitoxin MazE9;protein_id=WP_003901465.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3096090 3097133 . - . ID=gene-AL42_RS19725;Name=AL42_RS19725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19725;old_locus_tag=AL42_02907 NZ_KK316784.1 Protein Homology CDS 3096090 3097133 . - 0 ID=cds-WP_003414172.1;Parent=gene-AL42_RS19725;Dbxref=GenBank:WP_003414172.1;Name=WP_003414172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217318.1;locus_tag=AL42_RS19725;product=DUF2293 domain-containing protein;protein_id=WP_003414172.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3097132 3097599 . + . ID=gene-AL42_RS27710;Name=AL42_RS27710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27710;old_locus_tag=AL42_02908 NZ_KK316784.1 Protein Homology CDS 3097132 3097599 . + 0 ID=cds-WP_003414177.1;Parent=gene-AL42_RS27710;Dbxref=GenBank:WP_003414177.1;Name=WP_003414177.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020265.6;locus_tag=AL42_RS27710;product=type II toxin-antitoxin system TacA family antitoxin;protein_id=WP_003414177.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3097775 3098029 . - . ID=gene-AL42_RS27275;Name=AL42_RS27275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27275 NZ_KK316784.1 GeneMarkS-2+ CDS 3097775 3098029 . - 0 ID=cds-WP_003917684.1;Parent=gene-AL42_RS27275;Dbxref=GenBank:WP_003917684.1;Name=WP_003917684.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL42_RS27275;product=hypothetical protein;protein_id=WP_003917684.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3098177 3098581 . + . ID=gene-AL42_RS19735;Name=AL42_RS19735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19735;old_locus_tag=AL42_02910 NZ_KK316784.1 Protein Homology CDS 3098177 3098581 . + 0 ID=cds-WP_003414181.1;Parent=gene-AL42_RS19735;Dbxref=GenBank:WP_003414181.1;Name=WP_003414181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217321.1;locus_tag=AL42_RS19735;product=hypothetical protein;protein_id=WP_003414181.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3098578 3098769 . + . ID=gene-AL42_RS19740;Name=AL42_RS19740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19740;old_locus_tag=AL42_02911 NZ_KK316784.1 Protein Homology CDS 3098578 3098769 . + 0 ID=cds-WP_003414184.1;Parent=gene-AL42_RS19740;Dbxref=GenBank:WP_003414184.1;Name=WP_003414184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217322.1;locus_tag=AL42_RS19740;product=hypothetical protein;protein_id=WP_003414184.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 3098986 3099270 . + . ID=gene-AL42_RS27715;Name=AL42_RS27715;end_range=3099270,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS27715;partial=true;pseudo=true NZ_KK316784.1 Protein Homology CDS 3098986 3099270 . + 0 ID=cds-AL42_RS27715;Parent=gene-AL42_RS27715;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3099270,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217321.1;locus_tag=AL42_RS27715;partial=true;product=integrase catalytic domain-containing protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 3099295 3100122 . + . ID=gene-AL42_RS28025;Name=AL42_RS28025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS28025;old_locus_tag=AL42_02912 NZ_KK316784.1 Protein Homology CDS 3099295 3100122 . + 0 ID=cds-WP_323755006.1;Parent=gene-AL42_RS28025;Dbxref=GenBank:WP_323755006.1;Name=WP_323755006.1;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0005524,GO:0016893,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,obsolete endonuclease activity%2C active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters|0016893||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: protein motif:HMM:NF012870.6;locus_tag=AL42_RS28025;product=integrase catalytic domain-containing protein;protein_id=WP_323755006.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3100356 3100613 . + . ID=gene-AL42_RS19750;Name=AL42_RS19750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19750;old_locus_tag=AL42_02913 NZ_KK316784.1 Protein Homology CDS 3100356 3100613 . + 0 ID=cds-WP_003899489.1;Parent=gene-AL42_RS19750;Dbxref=GenBank:WP_003899489.1;Name=WP_003899489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217324.1;locus_tag=AL42_RS19750;product=hypothetical protein;protein_id=WP_003899489.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3100718 3101029 . + . ID=gene-AL42_RS19755;Name=AL42_RS19755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19755;old_locus_tag=AL42_02914 NZ_KK316784.1 Protein Homology CDS 3100718 3101029 . + 0 ID=cds-WP_003414190.1;Parent=gene-AL42_RS19755;Dbxref=GenBank:WP_003414190.1;Name=WP_003414190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217325.1;locus_tag=AL42_RS19755;product=hypothetical protein;protein_id=WP_003414190.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 3101051 3101290 . - . ID=gene-AL42_RS26300;Name=AL42_RS26300;end_range=3101290,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS26300;old_locus_tag=AL42_02915;partial=true;pseudo=true NZ_KK316784.1 Protein Homology CDS 3101051 3101290 . - 0 ID=cds-AL42_RS26300;Parent=gene-AL42_RS26300;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3101290,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017835819.1;locus_tag=AL42_RS26300;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 3101449 3102057 . + . ID=gene-AL42_RS19760;Name=AL42_RS19760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19760;old_locus_tag=AL42_02916 NZ_KK316784.1 Protein Homology CDS 3101449 3102057 . + 0 ID=cds-WP_003414195.1;Parent=gene-AL42_RS19760;Dbxref=GenBank:WP_003414195.1;Name=WP_003414195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217327.1;locus_tag=AL42_RS19760;product=hypothetical protein;protein_id=WP_003414195.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3102128 3103537 . + . ID=gene-AL42_RS19765;Name=AL42_RS19765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19765;old_locus_tag=AL42_02917 NZ_KK316784.1 Protein Homology CDS 3102128 3103537 . + 0 ID=cds-WP_003414198.1;Parent=gene-AL42_RS19765;Dbxref=GenBank:WP_003414198.1;Name=WP_003414198.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217328.1;locus_tag=AL42_RS19765;product=DDE-type integrase/transposase/recombinase;protein_id=WP_003414198.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3103534 3104346 . + . ID=gene-AL42_RS19770;Name=AL42_RS19770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19770;old_locus_tag=AL42_02918 NZ_KK316784.1 Protein Homology CDS 3103534 3104346 . + 0 ID=cds-WP_003899491.1;Parent=gene-AL42_RS19770;Dbxref=GenBank:WP_003899491.1;Name=WP_003899491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217329.1;locus_tag=AL42_RS19770;product=ExeA family protein;protein_id=WP_003899491.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3105657 3106603 . + . ID=gene-AL42_RS19775;Name=AL42_RS19775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19775;old_locus_tag=AL42_02919;partial=true;start_range=.,3105657 NZ_KK316784.1 Protein Homology CDS 3105657 3106603 . + 2 ID=cds-WP_078442600.1;Parent=gene-AL42_RS19775;Dbxref=GenBank:WP_078442600.1;Name=WP_078442600.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL42_RS19775;partial=true;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_078442600.1;start_range=.,3105657;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 3106642 3106986 . - . ID=gene-AL42_RS19780;Name=csm4;gbkey=Gene;gene=csm4;gene_biotype=pseudogene;locus_tag=AL42_RS19780;old_locus_tag=AL42_02920;partial=true;pseudo=true;start_range=.,3106642 NZ_KK316784.1 Protein Homology CDS 3106642 3106986 . - 0 ID=cds-AL42_RS19780;Parent=gene-AL42_RS19780;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0043571;gbkey=CDS;gene=csm4;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217336.1;locus_tag=AL42_RS19780;partial=true;product=type III-A CRISPR-associated RAMP protein Csm4;pseudo=true;start_range=.,3106642;transl_table=11 NZ_KK316784.1 RefSeq gene 3106967 3107677 . - . ID=gene-AL42_RS19785;Name=csm3;gbkey=Gene;gene=csm3;gene_biotype=protein_coding;locus_tag=AL42_RS19785;old_locus_tag=AL42_02921 NZ_KK316784.1 Protein Homology CDS 3106967 3107677 . - 0 ID=cds-WP_003414292.1;Parent=gene-AL42_RS19785;Dbxref=GenBank:WP_003414292.1;Name=WP_003414292.1;Ontology_term=GO:0043571;gbkey=CDS;gene=csm3;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217337.1;locus_tag=AL42_RS19785;product=type III-A CRISPR-associated RAMP protein Csm3;protein_id=WP_003414292.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3107687 3108061 . - . ID=gene-AL42_RS19790;Name=csm2;gbkey=Gene;gene=csm2;gene_biotype=protein_coding;locus_tag=AL42_RS19790;old_locus_tag=AL42_02922 NZ_KK316784.1 Protein Homology CDS 3107687 3108061 . - 0 ID=cds-WP_003414296.1;Parent=gene-AL42_RS19790;Dbxref=GenBank:WP_003414296.1;Name=WP_003414296.1;Ontology_term=GO:0043571;gbkey=CDS;gene=csm2;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217338.1;locus_tag=AL42_RS19790;product=type III-A CRISPR-associated protein Csm2;protein_id=WP_003414296.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3108058 3110496 . - . ID=gene-AL42_RS19795;Name=cas10;gbkey=Gene;gene=cas10;gene_biotype=protein_coding;locus_tag=AL42_RS19795;old_locus_tag=AL42_02923 NZ_KK316784.1 Protein Homology CDS 3108058 3110496 . - 0 ID=cds-WP_003900580.1;Parent=gene-AL42_RS19795;Dbxref=GenBank:WP_003900580.1;Name=WP_003900580.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas10;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217339.1;locus_tag=AL42_RS19795;product=type III-A CRISPR-associated protein Cas10/Csm1;protein_id=WP_003900580.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3110493 3111281 . - . ID=gene-AL42_RS19800;Name=cas6;gbkey=Gene;gene=cas6;gene_biotype=protein_coding;locus_tag=AL42_RS19800;old_locus_tag=AL42_02924 NZ_KK316784.1 Protein Homology CDS 3110493 3111281 . - 0 ID=cds-WP_003917092.1;Parent=gene-AL42_RS19800;Dbxref=GenBank:WP_003917092.1;Name=WP_003917092.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas6;go_function=RNA endonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917092.1;locus_tag=AL42_RS19800;product=CRISPR-associated endoribonuclease Cas6;protein_id=WP_003917092.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3111615 3112160 . - . ID=gene-AL42_RS19805;Name=AL42_RS19805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19805;old_locus_tag=AL42_02925 NZ_KK316784.1 Protein Homology CDS 3111615 3112160 . - 0 ID=cds-WP_014584866.1;Parent=gene-AL42_RS19805;Dbxref=GenBank:WP_014584866.1;Name=WP_014584866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217344.1;locus_tag=AL42_RS19805;product=DUF1802 family protein;protein_id=WP_014584866.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3112432 3113316 . - . ID=gene-AL42_RS19810;Name=AL42_RS19810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19810;old_locus_tag=AL42_02926 NZ_KK316784.1 Protein Homology CDS 3112432 3113316 . - 0 ID=cds-WP_003414409.1;Parent=gene-AL42_RS19810;Dbxref=GenBank:WP_003414409.1;Name=WP_003414409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217342.1;locus_tag=AL42_RS19810;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;protein_id=WP_003414409.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3113319 3114206 . - . ID=gene-AL42_RS19815;Name=AL42_RS19815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19815;old_locus_tag=AL42_02927 NZ_KK316784.1 Protein Homology CDS 3113319 3114206 . - 0 ID=cds-WP_003414414.1;Parent=gene-AL42_RS19815;Dbxref=GenBank:WP_003414414.1;Name=WP_003414414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217343.1;locus_tag=AL42_RS19815;product=type IV toxin-antitoxin system AbiEi family antitoxin;protein_id=WP_003414414.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3114511 3115056 . - . ID=gene-AL42_RS19820;Name=AL42_RS19820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19820;old_locus_tag=AL42_02928 NZ_KK316784.1 Protein Homology CDS 3114511 3115056 . - 0 ID=cds-WP_003910939.1;Parent=gene-AL42_RS19820;Dbxref=GenBank:WP_003910939.1;Name=WP_003910939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217344.1;locus_tag=AL42_RS19820;product=DUF1802 family protein;protein_id=WP_003910939.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3115053 3115322 . - . ID=gene-AL42_RS19825;Name=AL42_RS19825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19825;old_locus_tag=AL42_02929 NZ_KK316784.1 Protein Homology CDS 3115053 3115322 . - 0 ID=cds-WP_003414489.1;Parent=gene-AL42_RS19825;Dbxref=GenBank:WP_003414489.1;Name=WP_003414489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007411535.1;locus_tag=AL42_RS19825;product=DUF2277 domain-containing protein;protein_id=WP_003414489.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3115343 3115735 . - . ID=gene-AL42_RS19830;Name=AL42_RS19830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19830;old_locus_tag=AL42_02930 NZ_KK316784.1 Protein Homology CDS 3115343 3115735 . - 0 ID=cds-WP_003414492.1;Parent=gene-AL42_RS19830;Dbxref=GenBank:WP_003414492.1;Name=WP_003414492.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217345.1;locus_tag=AL42_RS19830;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003414492.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3115732 3115947 . - . ID=gene-AL42_RS19835;Name=AL42_RS19835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19835;old_locus_tag=AL42_02931 NZ_KK316784.1 Protein Homology CDS 3115732 3115947 . - 0 ID=cds-WP_003414495.1;Parent=gene-AL42_RS19835;Dbxref=GenBank:WP_003414495.1;Name=WP_003414495.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217346.1;locus_tag=AL42_RS19835;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_003414495.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3115994 3116743 . + . ID=gene-AL42_RS19840;Name=AL42_RS19840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19840;old_locus_tag=AL42_02932 NZ_KK316784.1 Protein Homology CDS 3115994 3116743 . + 0 ID=cds-WP_003902358.1;Parent=gene-AL42_RS19840;Dbxref=GenBank:WP_003902358.1;Name=WP_003902358.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217347.1;locus_tag=AL42_RS19840;product=enoyl-CoA hydratase;protein_id=WP_003902358.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3116822 3117904 . - . ID=gene-AL42_RS19845;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=AL42_RS19845;old_locus_tag=AL42_02933 NZ_KK316784.1 Protein Homology CDS 3116822 3117904 . - 0 ID=cds-WP_003414499.1;Parent=gene-AL42_RS19845;Dbxref=GenBank:WP_003414499.1;Name=WP_003414499.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=ugpC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217348.1;locus_tag=AL42_RS19845;product=ABC transporter ATP-binding protein;protein_id=WP_003414499.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3117897 3119207 . - . ID=gene-AL42_RS19850;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=AL42_RS19850;old_locus_tag=AL42_02934 NZ_KK316784.1 Protein Homology CDS 3117897 3119207 . - 0 ID=cds-WP_003414501.1;Parent=gene-AL42_RS19850;Dbxref=GenBank:WP_003414501.1;Name=WP_003414501.1;gbkey=CDS;gene=ugpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217349.1;locus_tag=AL42_RS19850;product=ABC transporter substrate-binding protein;protein_id=WP_003414501.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3119210 3120037 . - . ID=gene-AL42_RS19855;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=AL42_RS19855;old_locus_tag=AL42_02935 NZ_KK316784.1 Protein Homology CDS 3119210 3120037 . - 0 ID=cds-WP_003414504.1;Parent=gene-AL42_RS19855;Dbxref=GenBank:WP_003414504.1;Name=WP_003414504.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;gene=ugpE;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217350.1;locus_tag=AL42_RS19855;product=carbohydrate ABC transporter permease;protein_id=WP_003414504.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3120034 3120945 . - . ID=gene-AL42_RS19860;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=AL42_RS19860;old_locus_tag=AL42_02936 NZ_KK316784.1 Protein Homology CDS 3120034 3120945 . - 0 ID=cds-WP_003414505.1;Parent=gene-AL42_RS19860;Dbxref=GenBank:WP_003414505.1;Name=WP_003414505.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;gene=ugpA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217351.1;locus_tag=AL42_RS19860;product=carbohydrate ABC transporter permease;protein_id=WP_003414505.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3121032 3122351 . - . ID=gene-AL42_RS19865;Name=dinF;gbkey=Gene;gene=dinF;gene_biotype=protein_coding;locus_tag=AL42_RS19865;old_locus_tag=AL42_02937 NZ_KK316784.1 Protein Homology CDS 3121032 3122351 . - 0 ID=cds-WP_003414506.1;Parent=gene-AL42_RS19865;Dbxref=GenBank:WP_003414506.1;Name=WP_003414506.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;gene=dinF;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217352.1;locus_tag=AL42_RS19865;product=MATE family efflux transporter;protein_id=WP_003414506.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3122358 3123368 . - . ID=gene-AL42_RS19870;Name=nrnA;gbkey=Gene;gene=nrnA;gene_biotype=protein_coding;locus_tag=AL42_RS19870;old_locus_tag=AL42_02938 NZ_KK316784.1 Protein Homology CDS 3122358 3123368 . - 0 ID=cds-WP_003905944.1;Parent=gene-AL42_RS19870;Dbxref=GenBank:WP_003905944.1;Name=WP_003905944.1;gbkey=CDS;gene=nrnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217353.1;locus_tag=AL42_RS19870;product=bifunctional oligoribonuclease/PAP phosphatase NrnA;protein_id=WP_003905944.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3123343 3123894 . - . ID=gene-AL42_RS19875;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=AL42_RS19875;old_locus_tag=AL42_02939 NZ_KK316784.1 Protein Homology CDS 3123343 3123894 . - 0 ID=cds-WP_003414508.1;Parent=gene-AL42_RS19875;Dbxref=GenBank:WP_003414508.1;Name=WP_003414508.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217354.1;locus_tag=AL42_RS19875;product=30S ribosome-binding factor RbfA;protein_id=WP_003414508.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3123894 3126596 . - . ID=gene-AL42_RS19880;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=AL42_RS19880;old_locus_tag=AL42_02940 NZ_KK316784.1 Protein Homology CDS 3123894 3126596 . - 0 ID=cds-WP_003899505.1;Parent=gene-AL42_RS19880;Dbxref=GenBank:WP_003899505.1;Name=WP_003899505.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217355.1;locus_tag=AL42_RS19880;product=translation initiation factor IF-2;protein_id=WP_003899505.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3126682 3127059 . - . ID=gene-AL42_RS19885;Name=AL42_RS19885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19885;old_locus_tag=AL42_02941 NZ_KK316784.1 Protein Homology CDS 3126682 3127059 . - 0 ID=cds-WP_003899506.1;Parent=gene-AL42_RS19885;Dbxref=GenBank:WP_003899506.1;Name=WP_003899506.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: protein motif:HMM:NF016204.6;locus_tag=AL42_RS19885;product=YlxR family protein;protein_id=WP_003899506.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3127108 3128151 . - . ID=gene-AL42_RS19890;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=AL42_RS19890;old_locus_tag=AL42_02942 NZ_KK316784.1 Protein Homology CDS 3127108 3128151 . - 0 ID=cds-WP_003414511.1;Parent=gene-AL42_RS19890;Dbxref=GenBank:WP_003414511.1;Name=WP_003414511.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217357.1;locus_tag=AL42_RS19890;product=transcription termination factor NusA;protein_id=WP_003414511.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3128148 3128699 . - . ID=gene-AL42_RS19895;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=AL42_RS19895;old_locus_tag=AL42_02943 NZ_KK316784.1 Protein Homology CDS 3128148 3128699 . - 0 ID=cds-WP_003899507.1;Parent=gene-AL42_RS19895;Dbxref=GenBank:WP_003899507.1;Name=WP_003899507.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217358.1;locus_tag=AL42_RS19895;product=ribosome maturation factor RimP;protein_id=WP_003899507.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3128894 3129439 . + . ID=gene-AL42_RS19900;Name=AL42_RS19900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19900;old_locus_tag=AL42_02944 NZ_KK316784.1 Protein Homology CDS 3128894 3129439 . + 0 ID=cds-WP_003414516.1;Parent=gene-AL42_RS19900;Dbxref=GenBank:WP_003414516.1;Name=WP_003414516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217359.1;locus_tag=AL42_RS19900;product=hypothetical protein;protein_id=WP_003414516.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3129436 3129924 . + . ID=gene-AL42_RS19905;Name=AL42_RS19905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19905;old_locus_tag=AL42_02945 NZ_KK316784.1 Protein Homology CDS 3129436 3129924 . + 0 ID=cds-WP_003414522.1;Parent=gene-AL42_RS19905;Dbxref=GenBank:WP_003414522.1;Name=WP_003414522.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217360.1;locus_tag=AL42_RS19905;product=ferritin-like domain-containing protein;protein_id=WP_003414522.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3129925 3131673 . - . ID=gene-AL42_RS19910;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=AL42_RS19910;old_locus_tag=AL42_02946 NZ_KK316784.1 Protein Homology CDS 3129925 3131673 . - 0 ID=cds-WP_003899508.1;Parent=gene-AL42_RS19910;Dbxref=GenBank:WP_003899508.1;Name=WP_003899508.1;Ontology_term=GO:0006418,GO:0006433,GO:0000166,GO:0002161,GO:0004812,GO:0004827,GO:0005524;gbkey=CDS;gene=proS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA deacylase activity|0002161||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA,prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217361.1;locus_tag=AL42_RS19910;product=proline--tRNA ligase;protein_id=WP_003899508.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3131762 3133354 . - . ID=gene-AL42_RS19915;Name=efpA;gbkey=Gene;gene=efpA;gene_biotype=protein_coding;locus_tag=AL42_RS19915;old_locus_tag=AL42_02947 NZ_KK316784.1 Protein Homology CDS 3131762 3133354 . - 0 ID=cds-WP_003414532.1;Parent=gene-AL42_RS19915;Dbxref=GenBank:WP_003414532.1;Name=WP_003414532.1;gbkey=CDS;gene=efpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217362.1;locus_tag=AL42_RS19915;product=multidrug efflux MFS transporter EfpA;protein_id=WP_003414532.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3133377 3134594 . - . ID=gene-AL42_RS19920;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=AL42_RS19920;old_locus_tag=AL42_02948 NZ_KK316784.1 Protein Homology CDS 3133377 3134594 . - 0 ID=cds-WP_003414535.1;Parent=gene-AL42_RS19920;Dbxref=GenBank:WP_003414535.1;Name=WP_003414535.1;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215025.2;locus_tag=AL42_RS19920;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_003414535.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 3134871 3136245 . - . ID=gene-AL42_RS0105325;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=pseudogene;locus_tag=AL42_RS0105325;old_locus_tag=AL42_02949;pseudo=true NZ_KK316784.1 Protein Homology CDS 3134871 3136245 . - 0 ID=cds-AL42_RS0105325;Parent=gene-AL42_RS0105325;Note=frameshifted;Ontology_term=GO:0042242;gbkey=CDS;gene=cobB;go_function=cobyrinic acid a%2Cc-diamide synthase activity|0042242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217364.1;locus_tag=AL42_RS0105325;product=cobyrinate a%2Cc-diamide synthase;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 3136245 3136868 . - . ID=gene-AL42_RS19925;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=AL42_RS19925;old_locus_tag=AL42_02950 NZ_KK316784.1 Protein Homology CDS 3136245 3136868 . - 0 ID=cds-WP_003414539.1;Parent=gene-AL42_RS19925;Dbxref=GenBank:WP_003414539.1;Name=WP_003414539.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177908.1;locus_tag=AL42_RS19925;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_003414539.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3136889 3138778 . - . ID=gene-AL42_RS19930;Name=AL42_RS19930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19930;old_locus_tag=AL42_02951 NZ_KK316784.1 Protein Homology CDS 3136889 3138778 . - 0 ID=cds-WP_003901481.1;Parent=gene-AL42_RS19930;Dbxref=GenBank:WP_003901481.1;Name=WP_003901481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217366.1;locus_tag=AL42_RS19930;product=magnesium chelatase subunit D family protein;protein_id=WP_003901481.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3138775 3139245 . - . ID=gene-AL42_RS19935;Name=AL42_RS19935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19935;old_locus_tag=AL42_02952 NZ_KK316784.1 Protein Homology CDS 3138775 3139245 . - 0 ID=cds-WP_003414543.1;Parent=gene-AL42_RS19935;Dbxref=GenBank:WP_003414543.1;Name=WP_003414543.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217367.1;locus_tag=AL42_RS19935;product=GNAT family N-acetyltransferase;protein_id=WP_003414543.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3139304 3140785 . - . ID=gene-AL42_RS19940;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;locus_tag=AL42_RS19940;old_locus_tag=AL42_02953 NZ_KK316784.1 Protein Homology CDS 3139304 3140785 . - 0 ID=cds-WP_003414545.1;Parent=gene-AL42_RS19940;Dbxref=GenBank:WP_003414545.1;Name=WP_003414545.1;Ontology_term=GO:0006099,GO:0008924;gbkey=CDS;gene=mqo;go_function=L-malate dehydrogenase (quinone) activity|0008924||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217368.1;locus_tag=AL42_RS19940;product=malate dehydrogenase (quinone);protein_id=WP_003414545.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3140992 3142839 . + . ID=gene-AL42_RS19945;Name=AL42_RS19945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19945;old_locus_tag=AL42_02954 NZ_KK316784.1 Protein Homology CDS 3140992 3142839 . + 0 ID=cds-WP_009938581.1;Parent=gene-AL42_RS19945;Dbxref=GenBank:WP_009938581.1;Name=WP_009938581.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177909.1;locus_tag=AL42_RS19945;product=PE family protein;protein_id=WP_009938581.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3142876 3143916 . + . ID=gene-AL42_RS19950;Name=AL42_RS19950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19950;old_locus_tag=AL42_02955 NZ_KK316784.1 Protein Homology CDS 3142876 3143916 . + 0 ID=cds-WP_003414553.1;Parent=gene-AL42_RS19950;Dbxref=GenBank:WP_003414553.1;Name=WP_003414553.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217370.1;locus_tag=AL42_RS19950;product=alpha/beta hydrolase;protein_id=WP_003414553.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3143929 3145308 . + . ID=gene-AL42_RS19955;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=AL42_RS19955;old_locus_tag=AL42_02956 NZ_KK316784.1 Protein Homology CDS 3143929 3145308 . + 0 ID=cds-WP_003414557.1;Parent=gene-AL42_RS19955;Dbxref=GenBank:WP_003414557.1;Name=WP_003414557.1;Ontology_term=GO:0010126,GO:0050627,GO:0070402;gbkey=CDS;gene=mtr;go_function=mycothione reductase [NAD(P)H] activity|0050627||IEA,NADPH binding|0070402||IEA;go_process=mycothiol metabolic process|0010126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177910.1;locus_tag=AL42_RS19955;product=mycothione reductase;protein_id=WP_003414557.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3145408 3146526 . + . ID=gene-AL42_RS19960;Name=nicT;gbkey=Gene;gene=nicT;gene_biotype=protein_coding;locus_tag=AL42_RS19960;old_locus_tag=AL42_02957 NZ_KK316784.1 Protein Homology CDS 3145408 3146526 . + 0 ID=cds-WP_003414559.1;Parent=gene-AL42_RS19960;Dbxref=GenBank:WP_003414559.1;Name=WP_003414559.1;gbkey=CDS;gene=nicT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217372.1;locus_tag=AL42_RS19960;product=Nickel transporter NicT;protein_id=WP_003414559.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3146592 3146924 . + . ID=gene-AL42_RS26930;Name=AL42_RS26930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS26930;old_locus_tag=AL42_02958 NZ_KK316784.1 Protein Homology CDS 3146592 3146924 . + 0 ID=cds-WP_003414562.1;Parent=gene-AL42_RS26930;Dbxref=GenBank:WP_003414562.1;Name=WP_003414562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003414562.1;locus_tag=AL42_RS26930;product=GTP-binding protein;protein_id=WP_003414562.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3146936 3147151 . + . ID=gene-AL42_RS26935;Name=AL42_RS26935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS26935;old_locus_tag=AL42_02959 NZ_KK316784.1 Protein Homology CDS 3146936 3147151 . + 0 ID=cds-WP_003414566.1;Parent=gene-AL42_RS26935;Dbxref=GenBank:WP_003414566.1;Name=WP_003414566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003414566.1;locus_tag=AL42_RS26935;product=P-loop NTPase family protein;protein_id=WP_003414566.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3147307 3148083 . - . ID=gene-AL42_RS19975;Name=AL42_RS19975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19975;old_locus_tag=AL42_02960 NZ_KK316784.1 Protein Homology CDS 3147307 3148083 . - 0 ID=cds-WP_003414570.1;Parent=gene-AL42_RS19975;Dbxref=GenBank:WP_003414570.1;Name=WP_003414570.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217373.1;locus_tag=AL42_RS19975;product=3-oxoacyl-ACP reductase;protein_id=WP_003414570.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3148080 3149447 . - . ID=gene-AL42_RS19980;Name=aldC;gbkey=Gene;gene=aldC;gene_biotype=protein_coding;locus_tag=AL42_RS19980;old_locus_tag=AL42_02961 NZ_KK316784.1 Protein Homology CDS 3148080 3149447 . - 0 ID=cds-WP_003900585.1;Parent=gene-AL42_RS19980;Dbxref=GenBank:WP_003900585.1;Name=WP_003900585.1;Ontology_term=GO:0004030;gbkey=CDS;gene=aldC;go_function=aldehyde dehydrogenase [NAD(P)+] activity|0004030||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013988958.1;locus_tag=AL42_RS19980;product=aldehyde dehydrogenase family protein;protein_id=WP_003900585.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3149444 3150370 . - . ID=gene-AL42_RS19985;Name=AL42_RS19985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19985;old_locus_tag=AL42_02962 NZ_KK316784.1 Protein Homology CDS 3149444 3150370 . - 0 ID=cds-WP_003900586.1;Parent=gene-AL42_RS19985;Dbxref=GenBank:WP_003900586.1;Name=WP_003900586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217375.1;locus_tag=AL42_RS19985;product=gamma-glutamyl-gamma-aminobutyrate hydrolase;protein_id=WP_003900586.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3150351 3151724 . - . ID=gene-AL42_RS19990;Name=AL42_RS19990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS19990;old_locus_tag=AL42_02963 NZ_KK316784.1 Protein Homology CDS 3150351 3151724 . - 0 ID=cds-WP_003414579.1;Parent=gene-AL42_RS19990;Dbxref=GenBank:WP_003414579.1;Name=WP_003414579.1;Ontology_term=GO:0006542,GO:0004356,GO:0005524,GO:0046872;gbkey=CDS;go_function=glutamine synthetase activity|0004356||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217376.1;locus_tag=AL42_RS19990;product=glutamine synthetase family protein;protein_id=WP_003414579.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3151884 3152741 . - . ID=gene-AL42_RS19995;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=AL42_RS19995;old_locus_tag=AL42_02964 NZ_KK316784.1 Protein Homology CDS 3151884 3152741 . - 0 ID=cds-WP_003899513.1;Parent=gene-AL42_RS19995;Dbxref=GenBank:WP_003899513.1;Name=WP_003899513.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177911.1;locus_tag=AL42_RS19995;product=type I methionyl aminopeptidase;protein_id=WP_003899513.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3152783 3153367 . - . ID=gene-AL42_RS20000;Name=AL42_RS20000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20000;old_locus_tag=AL42_02965 NZ_KK316784.1 Protein Homology CDS 3152783 3153367 . - 0 ID=cds-WP_003414585.1;Parent=gene-AL42_RS20000;Dbxref=GenBank:WP_003414585.1;Name=WP_003414585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217378.1;locus_tag=AL42_RS20000;product=DUF1707 SHOCT-like domain-containing protein;protein_id=WP_003414585.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3153470 3153718 . + . ID=gene-AL42_RS0105330;Name=AL42_RS0105330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0105330;old_locus_tag=AL42_02966 NZ_KK316784.1 Protein Homology CDS 3153470 3153718 . + 0 ID=cds-WP_003913411.1;Parent=gene-AL42_RS0105330;Dbxref=GenBank:WP_003913411.1;Name=WP_003913411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007411570.1;locus_tag=AL42_RS0105330;product=antitoxin VapB23;protein_id=WP_003913411.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3153715 3154095 . + . ID=gene-AL42_RS20005;Name=AL42_RS20005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20005;old_locus_tag=AL42_02967 NZ_KK316784.1 Protein Homology CDS 3153715 3154095 . + 0 ID=cds-WP_003414592.1;Parent=gene-AL42_RS20005;Dbxref=GenBank:WP_003414592.1;Name=WP_003414592.1;Ontology_term=GO:0004540,GO:0046872,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217379.1;locus_tag=AL42_RS20005;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003414592.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3154177 3155988 . - . ID=gene-AL42_RS20010;Name=AL42_RS20010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20010;old_locus_tag=AL42_02968 NZ_KK316784.1 Protein Homology CDS 3154177 3155988 . - 0 ID=cds-WP_003414596.1;Parent=gene-AL42_RS20010;Dbxref=GenBank:WP_003414596.1;Name=WP_003414596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217380.1;locus_tag=AL42_RS20010;product=penicillin-binding protein;protein_id=WP_003414596.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3156260 3156541 . + . ID=gene-AL42_RS20015;Name=relF;gbkey=Gene;gene=relF;gene_biotype=protein_coding;locus_tag=AL42_RS20015;old_locus_tag=AL42_02969 NZ_KK316784.1 Protein Homology CDS 3156260 3156541 . + 0 ID=cds-WP_003414599.1;Parent=gene-AL42_RS20015;Dbxref=GenBank:WP_003414599.1;Name=WP_003414599.1;gbkey=CDS;gene=relF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217381.1;locus_tag=AL42_RS20015;product=type II toxin-antitoxin system antitoxin RelF;protein_id=WP_003414599.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3156545 3156808 . + . ID=gene-AL42_RS20020;Name=relG;gbkey=Gene;gene=relG;gene_biotype=protein_coding;locus_tag=AL42_RS20020;old_locus_tag=AL42_02970 NZ_KK316784.1 Protein Homology CDS 3156545 3156808 . + 0 ID=cds-WP_003414602.1;Parent=gene-AL42_RS20020;Dbxref=GenBank:WP_003414602.1;Name=WP_003414602.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;gene=relG;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217382.1;locus_tag=AL42_RS20020;product=type II toxin-antitoxin system RelE family toxin;protein_id=WP_003414602.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3157181 3158035 . - . ID=gene-AL42_RS20025;Name=AL42_RS20025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20025;old_locus_tag=AL42_02971 NZ_KK316784.1 Protein Homology CDS 3157181 3158035 . - 0 ID=cds-WP_003899516.1;Parent=gene-AL42_RS20025;Dbxref=GenBank:WP_003899516.1;Name=WP_003899516.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217383.1;locus_tag=AL42_RS20025;product=GNAT family N-acetyltransferase;protein_id=WP_003899516.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3158091 3159254 . - . ID=gene-AL42_RS20030;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=AL42_RS20030;old_locus_tag=AL42_02972 NZ_KK316784.1 Protein Homology CDS 3158091 3159254 . - 0 ID=cds-WP_003899517.1;Parent=gene-AL42_RS20030;Dbxref=GenBank:WP_003899517.1;Name=WP_003899517.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217384.1;locus_tag=AL42_RS20030;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_003899517.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3159271 3160485 . - . ID=gene-AL42_RS20035;Name=rip;gbkey=Gene;gene=rip;gene_biotype=protein_coding;locus_tag=AL42_RS20035;old_locus_tag=AL42_02973 NZ_KK316784.1 Protein Homology CDS 3159271 3160485 . - 0 ID=cds-WP_003414610.1;Parent=gene-AL42_RS20035;Dbxref=GenBank:WP_003414610.1;Name=WP_003414610.1;gbkey=CDS;gene=rip;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217385.1;locus_tag=AL42_RS20035;product=zinc metalloprotease Rip;protein_id=WP_003414610.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3160493 3161734 . - . ID=gene-AL42_RS20040;Name=dxr;gbkey=Gene;gene=dxr;gene_biotype=protein_coding;locus_tag=AL42_RS20040;old_locus_tag=AL42_02974 NZ_KK316784.1 Protein Homology CDS 3160493 3161734 . - 0 ID=cds-WP_003414613.1;Parent=gene-AL42_RS20040;Dbxref=GenBank:WP_003414613.1;Name=WP_003414613.1;Ontology_term=GO:0008299,GO:0019288,GO:0030604,GO:0046872,GO:0005737;gbkey=CDS;gene=dxr;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217386.2;locus_tag=AL42_RS20040;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_003414613.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3161861 3162118 . + . ID=gene-AL42_RS20045;Name=AL42_RS20045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20045;old_locus_tag=AL42_02975 NZ_KK316784.1 Protein Homology CDS 3161861 3162118 . + 0 ID=cds-WP_003414620.1;Parent=gene-AL42_RS20045;Dbxref=GenBank:WP_003414620.1;Name=WP_003414620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217387.1;locus_tag=AL42_RS20045;product=ribbon-helix-helix domain-containing protein;protein_id=WP_003414620.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3162105 3162548 . + . ID=gene-AL42_RS20050;Name=AL42_RS20050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20050;old_locus_tag=AL42_02976 NZ_KK316784.1 Protein Homology CDS 3162105 3162548 . + 0 ID=cds-WP_003414624.1;Parent=gene-AL42_RS20050;Dbxref=GenBank:WP_003414624.1;Name=WP_003414624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217388.1;locus_tag=AL42_RS20050;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003414624.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3162628 3163290 . + . ID=gene-AL42_RS20055;Name=mpt83;gbkey=Gene;gene=mpt83;gene_biotype=protein_coding;locus_tag=AL42_RS20055;old_locus_tag=AL42_02977 NZ_KK316784.1 Protein Homology CDS 3162628 3163290 . + 0 ID=cds-WP_003414630.1;Parent=gene-AL42_RS20055;Dbxref=GenBank:WP_003414630.1;Name=WP_003414630.1;gbkey=CDS;gene=mpt83;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217389.1;locus_tag=AL42_RS20055;product=cell surface glycolipoprotein Mpt83;protein_id=WP_003414630.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3163386 3163577 . + . ID=gene-AL42_RS20060;Name=AL42_RS20060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20060;old_locus_tag=AL42_02978 NZ_KK316784.1 Protein Homology CDS 3163386 3163577 . + 0 ID=cds-WP_003414632.1;Parent=gene-AL42_RS20060;Dbxref=GenBank:WP_003414632.1;Name=WP_003414632.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015630591.1;locus_tag=AL42_RS20060;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_003414632.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3163909 3165657 . + . ID=gene-AL42_RS20065;Name=AL42_RS20065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20065;old_locus_tag=AL42_02979 NZ_KK316784.1 Protein Homology CDS 3163909 3165657 . + 0 ID=cds-WP_003912869.1;Parent=gene-AL42_RS20065;Dbxref=GenBank:WP_003912869.1;Name=WP_003912869.1;Ontology_term=GO:0017004,GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015303615.1;locus_tag=AL42_RS20065;product=cytochrome c biogenesis protein DipZ;protein_id=WP_003912869.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3165753 3166334 . + . ID=gene-AL42_RS20070;Name=AL42_RS20070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20070;old_locus_tag=AL42_02980 NZ_KK316784.1 Protein Homology CDS 3165753 3166334 . + 0 ID=cds-WP_003414644.1;Parent=gene-AL42_RS20070;Dbxref=GenBank:WP_003414644.1;Name=WP_003414644.1;Ontology_term=GO:0007155;gbkey=CDS;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217391.1;locus_tag=AL42_RS20070;product=fasciclin domain-containing protein;protein_id=WP_003414644.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3166434 3166700 . + . ID=gene-AL42_RS20075;Name=AL42_RS20075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20075;old_locus_tag=AL42_02981 NZ_KK316784.1 Protein Homology CDS 3166434 3166700 . + 0 ID=cds-WP_015456449.1;Parent=gene-AL42_RS20075;Dbxref=GenBank:WP_015456449.1;Name=WP_015456449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010908416.1;locus_tag=AL42_RS20075;product=DUF2631 domain-containing protein;protein_id=WP_015456449.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3166731 3167594 . - . ID=gene-AL42_RS20080;Name=AL42_RS20080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20080;old_locus_tag=AL42_02982 NZ_KK316784.1 Protein Homology CDS 3166731 3167594 . - 0 ID=cds-WP_003899523.1;Parent=gene-AL42_RS20080;Dbxref=GenBank:WP_003899523.1;Name=WP_003899523.1;Ontology_term=GO:0017004,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177912.1;locus_tag=AL42_RS20080;product=cytochrome c biogenesis CcdA family protein;protein_id=WP_003899523.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3167599 3168120 . - . ID=gene-AL42_RS20085;Name=AL42_RS20085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20085;old_locus_tag=AL42_02983 NZ_KK316784.1 Protein Homology CDS 3167599 3168120 . - 0 ID=cds-WP_003414654.1;Parent=gene-AL42_RS20085;Dbxref=GenBank:WP_003414654.1;Name=WP_003414654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217394.1;locus_tag=AL42_RS20085;product=disulfide bond-forming protein DsbE;protein_id=WP_003414654.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3168306 3169400 . - . ID=gene-AL42_RS20090;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=AL42_RS20090;old_locus_tag=AL42_02984 NZ_KK316784.1 Protein Homology CDS 3168306 3169400 . - 0 ID=cds-WP_003414658.1;Parent=gene-AL42_RS20090;Dbxref=GenBank:WP_003414658.1;Name=WP_003414658.1;Ontology_term=GO:0030488,GO:0070475,GO:0008757,GO:0016433;gbkey=CDS;gene=rlmN;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,rRNA (adenine) methyltransferase activity|0016433||IEA;go_process=tRNA methylation|0030488||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003875108.1;locus_tag=AL42_RS20090;product=dual-specificity RNA methyltransferase RlmN;protein_id=WP_003414658.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3169423 3170343 . - . ID=gene-AL42_RS20095;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=AL42_RS20095;old_locus_tag=AL42_02985 NZ_KK316784.1 Protein Homology CDS 3169423 3170343 . - 0 ID=cds-WP_003414661.1;Parent=gene-AL42_RS20095;Dbxref=GenBank:WP_003414661.1;Name=WP_003414661.1;Ontology_term=GO:0016024,GO:0004605;gbkey=CDS;gene=cdsA;go_function=phosphatidate cytidylyltransferase activity|0004605||IEA;go_process=CDP-diacylglycerol biosynthetic process|0016024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217397.1;locus_tag=AL42_RS20095;product=phosphatidate cytidylyltransferase;protein_id=WP_003414661.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3170366 3170923 . - . ID=gene-AL42_RS20100;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=AL42_RS20100;old_locus_tag=AL42_02986 NZ_KK316784.1 Protein Homology CDS 3170366 3170923 . - 0 ID=cds-WP_003414663.1;Parent=gene-AL42_RS20100;Dbxref=GenBank:WP_003414663.1;Name=WP_003414663.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217398.1;locus_tag=AL42_RS20100;product=ribosome recycling factor;protein_id=WP_003414663.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 3170990 3171063 . - . ID=gene-AL42_RS28175;Name=AL42_RS28175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS28175;partial=true;pseudo=true;start_range=.,3170990 NZ_KK316784.1 Protein Homology CDS 3170990 3171063 . - 0 ID=cds-AL42_RS28175;Parent=gene-AL42_RS28175;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216909.1;locus_tag=AL42_RS28175;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3170990;transl_table=11 NZ_KK316784.1 RefSeq gene 3171095 3171880 . - . ID=gene-AL42_RS20105;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=AL42_RS20105;old_locus_tag=AL42_02987 NZ_KK316784.1 Protein Homology CDS 3171095 3171880 . - 0 ID=cds-WP_003414665.1;Parent=gene-AL42_RS20105;Dbxref=GenBank:WP_003414665.1;Name=WP_003414665.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217399.1;locus_tag=AL42_RS20105;product=UMP kinase;protein_id=WP_003414665.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3172115 3172873 . + . ID=gene-AL42_RS20110;Name=AL42_RS20110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20110;old_locus_tag=AL42_02988 NZ_KK316784.1 Protein Homology CDS 3172115 3172873 . + 0 ID=cds-WP_003414666.1;Parent=gene-AL42_RS20110;Dbxref=GenBank:WP_003414666.1;Name=WP_003414666.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917701.1;locus_tag=AL42_RS20110;product=winged helix-turn-helix domain-containing protein;protein_id=WP_003414666.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 3172888 3174268 . - . ID=gene-AL42_RS20115;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=pseudogene;locus_tag=AL42_RS20115;old_locus_tag=AL42_02989;pseudo=true NZ_KK316784.1 Protein Homology CDS 3172888 3174268 . - 0 ID=cds-AL42_RS20115;Parent=gene-AL42_RS20115;Note=frameshifted;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017351709.1;locus_tag=AL42_RS20115;product=IS607 family element RNA-guided endonuclease TnpB;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 3174268 3174855 . - . ID=gene-AL42_RS0105335;Name=AL42_RS0105335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0105335;old_locus_tag=AL42_02990 NZ_KK316784.1 Protein Homology CDS 3174268 3174855 . - 0 ID=cds-WP_003414668.1;Parent=gene-AL42_RS0105335;Dbxref=GenBank:WP_003414668.1;Name=WP_003414668.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003414668.1;locus_tag=AL42_RS0105335;product=IS607-like element IS1539 family transposase;protein_id=WP_003414668.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3175154 3175573 . + . ID=gene-AL42_RS20120;Name=AL42_RS20120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20120;old_locus_tag=AL42_02991 NZ_KK316784.1 Protein Homology CDS 3175154 3175573 . + 0 ID=cds-WP_003899525.1;Parent=gene-AL42_RS20120;Dbxref=GenBank:WP_003899525.1;Name=WP_003899525.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217403.1;locus_tag=AL42_RS20120;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_003899525.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3175587 3177008 . - . ID=gene-AL42_RS20125;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=AL42_RS20125;old_locus_tag=AL42_02992 NZ_KK316784.1 Protein Homology CDS 3175587 3177008 . - 0 ID=cds-WP_003414672.1;Parent=gene-AL42_RS20125;Dbxref=GenBank:WP_003414672.1;Name=WP_003414672.1;Ontology_term=GO:0003824;gbkey=CDS;gene=amiC;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217404.1;locus_tag=AL42_RS20125;product=amidase;protein_id=WP_003414672.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3177015 3177830 . - . ID=gene-AL42_RS20130;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=AL42_RS20130;old_locus_tag=AL42_02993 NZ_KK316784.1 Protein Homology CDS 3177015 3177830 . - 0 ID=cds-WP_003899527.1;Parent=gene-AL42_RS20130;Dbxref=GenBank:WP_003899527.1;Name=WP_003899527.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217405.1;locus_tag=AL42_RS20130;product=translation elongation factor Ts;protein_id=WP_003899527.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3177842 3178705 . - . ID=gene-AL42_RS20135;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=AL42_RS20135;old_locus_tag=AL42_02994 NZ_KK316784.1 Protein Homology CDS 3177842 3178705 . - 0 ID=cds-WP_003899528.1;Parent=gene-AL42_RS20135;Dbxref=GenBank:WP_003899528.1;Name=WP_003899528.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217406.1;locus_tag=AL42_RS20135;product=30S ribosomal protein S2;protein_id=WP_003899528.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 3179004 3179384 . + . ID=gene-AL42_RS27280;Name=AL42_RS27280;end_range=3179384,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS27280;partial=true;pseudo=true NZ_KK316784.1 Protein Homology CDS 3179004 3179384 . + 0 ID=cds-AL42_RS27280;Parent=gene-AL42_RS27280;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0008237,GO:0046872;end_range=3179384,.;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF013700.7;locus_tag=AL42_RS27280;partial=true;product=M23 family metallopeptidase;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 3179517 3180743 . - . ID=gene-AL42_RS20140;Name=AL42_RS20140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20140;old_locus_tag=AL42_02996 NZ_KK316784.1 Protein Homology CDS 3179517 3180743 . - 0 ID=cds-WP_003414680.1;Parent=gene-AL42_RS20140;Dbxref=GenBank:WP_003414680.1;Name=WP_003414680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177913.1;locus_tag=AL42_RS20140;product=PPE family protein;protein_id=WP_003414680.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3181143 3182120 . + . ID=gene-AL42_RS20145;Name=AL42_RS20145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20145;old_locus_tag=AL42_02997 NZ_KK316784.1 Protein Homology CDS 3181143 3182120 . + 0 ID=cds-WP_003414686.1;Parent=gene-AL42_RS20145;Dbxref=GenBank:WP_003414686.1;Name=WP_003414686.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217409.1;locus_tag=AL42_RS20145;product=LLM class F420-dependent oxidoreductase;protein_id=WP_003414686.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3182117 3183013 . - . ID=gene-AL42_RS20150;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=AL42_RS20150;old_locus_tag=AL42_02998 NZ_KK316784.1 Protein Homology CDS 3182117 3183013 . - 0 ID=cds-WP_031721829.1;Parent=gene-AL42_RS20150;Dbxref=GenBank:WP_031721829.1;Name=WP_031721829.1;Ontology_term=GO:0006313,GO:0007059,GO:0051301,GO:0003677,GO:0009037;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA,tyrosine-based site-specific recombinase activity|0009037||IEA;go_process=DNA transposition|0006313||IEA,chromosome segregation|0007059||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217410.1;locus_tag=AL42_RS20150;product=tyrosine recombinase XerC;protein_id=WP_031721829.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3183104 3183955 . - . ID=gene-AL42_RS20155;Name=viuB;gbkey=Gene;gene=viuB;gene_biotype=protein_coding;locus_tag=AL42_RS20155;old_locus_tag=AL42_02999 NZ_KK316784.1 Protein Homology CDS 3183104 3183955 . - 0 ID=cds-WP_003900590.1;Parent=gene-AL42_RS20155;Dbxref=GenBank:WP_003900590.1;Name=WP_003900590.1;Ontology_term=GO:0015891,GO:0071949;gbkey=CDS;gene=viuB;go_function=FAD binding|0071949||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217411.1;locus_tag=AL42_RS20155;product=siderophore-interacting protein;protein_id=WP_003900590.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3183988 3185157 . - . ID=gene-AL42_RS20160;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=AL42_RS20160;old_locus_tag=AL42_03000 NZ_KK316784.1 Protein Homology CDS 3183988 3185157 . - 0 ID=cds-WP_003414694.1;Parent=gene-AL42_RS20160;Dbxref=GenBank:WP_003414694.1;Name=WP_003414694.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217412.2;locus_tag=AL42_RS20160;product=DNA-processing protein DprA;protein_id=WP_003414694.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3185154 3186665 . - . ID=gene-AL42_RS20165;Name=AL42_RS20165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20165;old_locus_tag=AL42_03001 NZ_KK316784.1 Protein Homology CDS 3185154 3186665 . - 0 ID=cds-WP_003414700.1;Parent=gene-AL42_RS20165;Dbxref=GenBank:WP_003414700.1;Name=WP_003414700.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217413.1;locus_tag=AL42_RS20165;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_003414700.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3186665 3187051 . - . ID=gene-AL42_RS20170;Name=AL42_RS20170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20170;old_locus_tag=AL42_03002 NZ_KK316784.1 Protein Homology CDS 3186665 3187051 . - 0 ID=cds-WP_003414702.1;Parent=gene-AL42_RS20170;Dbxref=GenBank:WP_003414702.1;Name=WP_003414702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217414.1;locus_tag=AL42_RS20170;product=YraN family protein;protein_id=WP_003414702.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3187299 3188129 . - . ID=gene-AL42_RS20175;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=AL42_RS20175;old_locus_tag=AL42_03003 NZ_KK316784.1 Protein Homology CDS 3187299 3188129 . - 0 ID=cds-WP_003905963.1;Parent=gene-AL42_RS20175;Dbxref=GenBank:WP_003905963.1;Name=WP_003905963.1;Ontology_term=GO:0016783;gbkey=CDS;gene=fdhD;go_function=sulfurtransferase activity|0016783||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217415.1;locus_tag=AL42_RS20175;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_003905963.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3188129 3190468 . - . ID=gene-AL42_RS20180;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=AL42_RS20180;old_locus_tag=AL42_03004 NZ_KK316784.1 Protein Homology CDS 3188129 3190468 . - 0 ID=cds-WP_003899532.1;Parent=gene-AL42_RS20180;Dbxref=GenBank:WP_003899532.1;Name=WP_003899532.1;Ontology_term=GO:0016491,GO:0030151,GO:0051539;gbkey=CDS;gene=fdhF;go_function=oxidoreductase activity|0016491||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217416.1;locus_tag=AL42_RS20180;product=FdhF/YdeP family oxidoreductase;protein_id=WP_003899532.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3190526 3190831 . - . ID=gene-AL42_RS20185;Name=AL42_RS20185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20185;old_locus_tag=AL42_03005 NZ_KK316784.1 Protein Homology CDS 3190526 3190831 . - 0 ID=cds-WP_003414710.1;Parent=gene-AL42_RS20185;Dbxref=GenBank:WP_003414710.1;Name=WP_003414710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217417.1;locus_tag=AL42_RS20185;product=DUF2469 domain-containing protein;protein_id=WP_003414710.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3190885 3191679 . - . ID=gene-AL42_RS20190;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=AL42_RS20190;old_locus_tag=AL42_03006 NZ_KK316784.1 Protein Homology CDS 3190885 3191679 . - 0 ID=cds-WP_003414713.1;Parent=gene-AL42_RS20190;Dbxref=GenBank:WP_003414713.1;Name=WP_003414713.1;gbkey=CDS;gene=rnhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217418.1;locus_tag=AL42_RS20190;product=ribonuclease HII;protein_id=WP_003414713.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3191693 3192577 . - . ID=gene-AL42_RS20195;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=AL42_RS20195;old_locus_tag=AL42_03007 NZ_KK316784.1 Protein Homology CDS 3191693 3192577 . - 0 ID=cds-WP_031721830.1;Parent=gene-AL42_RS20195;Dbxref=GenBank:WP_031721830.1;Name=WP_031721830.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217419.1;locus_tag=AL42_RS20195;product=signal peptidase I;protein_id=WP_031721830.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3192635 3192976 . - . ID=gene-AL42_RS20200;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=AL42_RS20200;old_locus_tag=AL42_03008 NZ_KK316784.1 Protein Homology CDS 3192635 3192976 . - 0 ID=cds-WP_003414717.1;Parent=gene-AL42_RS20200;Dbxref=GenBank:WP_003414717.1;Name=WP_003414717.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217420.1;locus_tag=AL42_RS20200;product=50S ribosomal protein L19;protein_id=WP_003414717.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3193351 3194295 . + . ID=gene-AL42_RS20205;Name=AL42_RS20205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20205;old_locus_tag=AL42_03009 NZ_KK316784.1 Protein Homology CDS 3193351 3194295 . + 0 ID=cds-WP_003910944.1;Parent=gene-AL42_RS20205;Dbxref=GenBank:WP_003910944.1;Name=WP_003910944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217421.1;locus_tag=AL42_RS20205;product=serine hydrolase;protein_id=WP_003910944.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3194387 3195079 . - . ID=gene-AL42_RS20210;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=AL42_RS20210;old_locus_tag=AL42_03010 NZ_KK316784.1 Protein Homology CDS 3194387 3195079 . - 0 ID=cds-WP_003414722.1;Parent=gene-AL42_RS20210;Dbxref=GenBank:WP_003414722.1;Name=WP_003414722.1;Ontology_term=GO:0008033,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217422.1;locus_tag=AL42_RS20210;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_003414722.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3195083 3195613 . - . ID=gene-AL42_RS20215;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=AL42_RS20215;old_locus_tag=AL42_03011 NZ_KK316784.1 Protein Homology CDS 3195083 3195613 . - 0 ID=cds-WP_003414726.1;Parent=gene-AL42_RS20215;Dbxref=GenBank:WP_003414726.1;Name=WP_003414726.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217423.1;locus_tag=AL42_RS20215;product=ribosome maturation factor RimM;protein_id=WP_003414726.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3195627 3195869 . - . ID=gene-AL42_RS20220;Name=AL42_RS20220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20220;old_locus_tag=AL42_03012 NZ_KK316784.1 Protein Homology CDS 3195627 3195869 . - 0 ID=cds-WP_003414728.1;Parent=gene-AL42_RS20220;Dbxref=GenBank:WP_003414728.1;Name=WP_003414728.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217424.1;locus_tag=AL42_RS20220;product=RNA-binding protein;protein_id=WP_003414728.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3195877 3196365 . - . ID=gene-AL42_RS20225;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=AL42_RS20225;old_locus_tag=AL42_03013 NZ_KK316784.1 Protein Homology CDS 3195877 3196365 . - 0 ID=cds-WP_003414731.1;Parent=gene-AL42_RS20225;Dbxref=GenBank:WP_003414731.1;Name=WP_003414731.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsP;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217425.1;locus_tag=AL42_RS20225;product=30S ribosomal protein S16;protein_id=WP_003414731.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3196549 3196968 . - . ID=gene-AL42_RS20230;Name=AL42_RS20230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20230;old_locus_tag=AL42_03014 NZ_KK316784.1 Protein Homology CDS 3196549 3196968 . - 0 ID=cds-WP_003912031.1;Parent=gene-AL42_RS20230;Dbxref=GenBank:WP_003912031.1;Name=WP_003912031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003875068.1;locus_tag=AL42_RS20230;product=nuclear transport factor 2 family protein;protein_id=WP_003912031.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3197061 3197936 . + . ID=gene-AL42_RS20235;Name=dacB2;gbkey=Gene;gene=dacB2;gene_biotype=protein_coding;locus_tag=AL42_RS20235;old_locus_tag=AL42_03015 NZ_KK316784.1 Protein Homology CDS 3197061 3197936 . + 0 ID=cds-WP_003414736.1;Parent=gene-AL42_RS20235;Dbxref=GenBank:WP_003414736.1;Name=WP_003414736.1;gbkey=CDS;gene=dacB2;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177914.1;locus_tag=AL42_RS20235;product=D-alanyl-D-alanine carboxypeptidase DacB2;protein_id=WP_003414736.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3197996 3198583 . - . ID=gene-AL42_RS20240;Name=AL42_RS20240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20240;old_locus_tag=AL42_03016 NZ_KK316784.1 Protein Homology CDS 3197996 3198583 . - 0 ID=cds-WP_003414739.1;Parent=gene-AL42_RS20240;Dbxref=GenBank:WP_003414739.1;Name=WP_003414739.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217428.1;locus_tag=AL42_RS20240;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003414739.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3198585 3200420 . - . ID=gene-AL42_RS20245;Name=AL42_RS20245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20245;old_locus_tag=AL42_03017 NZ_KK316784.1 Protein Homology CDS 3198585 3200420 . - 0 ID=cds-WP_003899536.1;Parent=gene-AL42_RS20245;Dbxref=GenBank:WP_003899536.1;Name=WP_003899536.1;Ontology_term=GO:0047420;gbkey=CDS;go_function=N-acyl-D-amino-acid deacylase activity|0047420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217429.1;locus_tag=AL42_RS20245;product=N-acyl-D-amino-acid deacylase family protein;protein_id=WP_003899536.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3200489 3202246 . - . ID=gene-AL42_RS20250;Name=pknI;gbkey=Gene;gene=pknI;gene_biotype=protein_coding;locus_tag=AL42_RS20250;old_locus_tag=AL42_03018 NZ_KK316784.1 Protein Homology CDS 3200489 3202246 . - 0 ID=cds-WP_003900593.1;Parent=gene-AL42_RS20250;Dbxref=GenBank:WP_003900593.1;Name=WP_003900593.1;gbkey=CDS;gene=pknI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217430.1;locus_tag=AL42_RS20250;product=serine/threonine protein kinase PknI;protein_id=WP_003900593.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3202290 3203402 . - . ID=gene-AL42_RS20255;Name=AL42_RS20255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20255;old_locus_tag=AL42_03019 NZ_KK316784.1 Protein Homology CDS 3202290 3203402 . - 0 ID=cds-WP_003899537.1;Parent=gene-AL42_RS20255;Dbxref=GenBank:WP_003899537.1;Name=WP_003899537.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217431.1;locus_tag=AL42_RS20255;product=metal-dependent hydrolase family protein;protein_id=WP_003899537.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3203430 3205007 . - . ID=gene-AL42_RS20260;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=AL42_RS20260;old_locus_tag=AL42_03020 NZ_KK316784.1 Protein Homology CDS 3203430 3205007 . - 0 ID=cds-WP_003414748.1;Parent=gene-AL42_RS20260;Dbxref=GenBank:WP_003414748.1;Name=WP_003414748.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217432.1;locus_tag=AL42_RS20260;product=signal recognition particle protein;protein_id=WP_003414748.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3205157 3206965 . + . ID=gene-AL42_RS20265;Name=AL42_RS20265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20265;old_locus_tag=AL42_03021 NZ_KK316784.1 Protein Homology CDS 3205157 3206965 . + 0 ID=cds-WP_003912033.1;Parent=gene-AL42_RS20265;Dbxref=GenBank:WP_003912033.1;Name=WP_003912033.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584875.1;locus_tag=AL42_RS20265;product=DEAD/DEAH box helicase;protein_id=WP_003912033.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3206976 3209402 . - . ID=gene-AL42_RS20270;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=AL42_RS20270;old_locus_tag=AL42_03022 NZ_KK316784.1 Protein Homology CDS 3206976 3209402 . - 0 ID=cds-WP_003899539.1;Parent=gene-AL42_RS20270;Dbxref=GenBank:WP_003899539.1;Name=WP_003899539.1;Ontology_term=GO:0008152,GO:0008773;gbkey=CDS;gene=glnD;go_function=[protein-PII] uridylyltransferase activity|0008773||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217434.1;locus_tag=AL42_RS20270;product=[protein-PII] uridylyltransferase;protein_id=WP_003899539.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3209460 3209798 . - . ID=gene-AL42_RS20275;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=AL42_RS20275;old_locus_tag=AL42_03023 NZ_KK316784.1 Protein Homology CDS 3209460 3209798 . - 0 ID=cds-WP_003414756.1;Parent=gene-AL42_RS20275;Dbxref=GenBank:WP_003414756.1;Name=WP_003414756.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217435.1;locus_tag=AL42_RS20275;product=nitrogen regulatory protein P-II;protein_id=WP_003414756.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3209795 3211228 . - . ID=gene-AL42_RS20280;Name=amt;gbkey=Gene;gene=amt;gene_biotype=protein_coding;locus_tag=AL42_RS20280;old_locus_tag=AL42_03024 NZ_KK316784.1 Protein Homology CDS 3209795 3211228 . - 0 ID=cds-WP_003899540.1;Parent=gene-AL42_RS20280;Dbxref=GenBank:WP_003899540.1;Name=WP_003899540.1;Ontology_term=GO:0072488,GO:0008519,GO:0016020;gbkey=CDS;gene=amt;go_component=membrane|0016020||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217436.1;locus_tag=AL42_RS20280;product=ammonium transporter;protein_id=WP_003899540.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3212261 3213529 . - . ID=gene-AL42_RS20285;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=AL42_RS20285;old_locus_tag=AL42_03026 NZ_KK316784.1 Protein Homology CDS 3212261 3213529 . - 0 ID=cds-WP_003899541.1;Parent=gene-AL42_RS20285;Dbxref=GenBank:WP_003899541.1;Name=WP_003899541.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217437.1;locus_tag=AL42_RS20285;product=signal recognition particle-docking protein FtsY;protein_id=WP_003899541.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3213579 3217196 . - . ID=gene-AL42_RS20290;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=AL42_RS20290;old_locus_tag=AL42_03027 NZ_KK316784.1 Protein Homology CDS 3213579 3217196 . - 0 ID=cds-WP_003899542.1;Parent=gene-AL42_RS20290;Dbxref=GenBank:WP_003899542.1;Name=WP_003899542.1;Ontology_term=GO:0007059,GO:0030261,GO:0005524;gbkey=CDS;gene=smc;go_function=ATP binding|0005524||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217438.2;locus_tag=AL42_RS20290;product=chromosome segregation protein SMC;protein_id=WP_003899542.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3217208 3217489 . - . ID=gene-AL42_RS20295;Name=acyP;gbkey=Gene;gene=acyP;gene_biotype=protein_coding;locus_tag=AL42_RS20295;old_locus_tag=AL42_03028 NZ_KK316784.1 Protein Homology CDS 3217208 3217489 . - 0 ID=cds-WP_003414811.1;Parent=gene-AL42_RS20295;Dbxref=GenBank:WP_003414811.1;Name=WP_003414811.1;Ontology_term=GO:0003998;gbkey=CDS;gene=acyP;go_function=acylphosphatase activity|0003998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177679.1;locus_tag=AL42_RS20295;product=acylphosphatase;protein_id=WP_003414811.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3217476 3217886 . - . ID=gene-AL42_RS20300;Name=AL42_RS20300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20300;old_locus_tag=AL42_03029 NZ_KK316784.1 Protein Homology CDS 3217476 3217886 . - 0 ID=cds-WP_003902372.1;Parent=gene-AL42_RS20300;Dbxref=GenBank:WP_003902372.1;Name=WP_003902372.1;Ontology_term=GO:0006979,GO:0004601;gbkey=CDS;go_function=peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217439.1;locus_tag=AL42_RS20300;product=OsmC family protein;protein_id=WP_003902372.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3217988 3218857 . - . ID=gene-AL42_RS20305;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=AL42_RS20305;old_locus_tag=AL42_03030 NZ_KK316784.1 Protein Homology CDS 3217988 3218857 . - 0 ID=cds-WP_003414814.1;Parent=gene-AL42_RS20305;Dbxref=GenBank:WP_003414814.1;Name=WP_003414814.1;Ontology_term=GO:0006281,GO:0008534,GO:0046872,GO:0005737;gbkey=CDS;gene=mutM;go_component=cytoplasm|0005737||IEA;go_function=oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217440.1;locus_tag=AL42_RS20305;product=DNA-formamidopyrimidine glycosylase;protein_id=WP_003414814.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3219216 3219938 . - . ID=gene-AL42_RS20310;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=AL42_RS20310;old_locus_tag=AL42_03031 NZ_KK316784.1 Protein Homology CDS 3219216 3219938 . - 0 ID=cds-WP_003414820.1;Parent=gene-AL42_RS20310;Dbxref=GenBank:WP_003414820.1;Name=WP_003414820.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217441.1;locus_tag=AL42_RS20310;product=ribonuclease III;protein_id=WP_003414820.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3219935 3220522 . - . ID=gene-AL42_RS20315;Name=AL42_RS20315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20315;old_locus_tag=AL42_03032 NZ_KK316784.1 Protein Homology CDS 3219935 3220522 . - 0 ID=cds-WP_003912009.1;Parent=gene-AL42_RS20315;Dbxref=GenBank:WP_003912009.1;Name=WP_003912009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912009.1;locus_tag=AL42_RS20315;product=YceD family protein;protein_id=WP_003912009.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3220609 3221346 . - . ID=gene-AL42_RS20320;Name=sepIVA;gbkey=Gene;gene=sepIVA;gene_biotype=protein_coding;locus_tag=AL42_RS20320;old_locus_tag=AL42_03033 NZ_KK316784.1 Protein Homology CDS 3220609 3221346 . - 0 ID=cds-WP_003414826.1;Parent=gene-AL42_RS20320;Dbxref=GenBank:WP_003414826.1;Name=WP_003414826.1;gbkey=CDS;gene=sepIVA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217443.1;locus_tag=AL42_RS20320;product=cell division protein SepIVA;protein_id=WP_003414826.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3221585 3222370 . + . ID=gene-AL42_RS20325;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=AL42_RS20325;old_locus_tag=AL42_03034 NZ_KK316784.1 Protein Homology CDS 3221585 3222370 . + 0 ID=cds-WP_003414828.1;Parent=gene-AL42_RS20325;Dbxref=GenBank:WP_003414828.1;Name=WP_003414828.1;gbkey=CDS;gene=tesA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217444.1;locus_tag=AL42_RS20325;product=thioesterase TesA;protein_id=WP_003414828.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3222357 3222668 . + . ID=gene-AL42_RS20330;Name=AL42_RS20330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20330;old_locus_tag=AL42_03035 NZ_KK316784.1 Protein Homology CDS 3222357 3222668 . + 0 ID=cds-WP_003900596.1;Parent=gene-AL42_RS20330;Dbxref=GenBank:WP_003900596.1;Name=WP_003900596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217445.1;locus_tag=AL42_RS20330;product=hypothetical protein;protein_id=WP_003900596.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3223084 3224835 . + . ID=gene-AL42_RS20335;Name=fadD26;gbkey=Gene;gene=fadD26;gene_biotype=protein_coding;gene_synonym=faaL26;locus_tag=AL42_RS20335;old_locus_tag=AL42_03036 NZ_KK316784.1 Protein Homology CDS 3223084 3224835 . + 0 ID=cds-WP_003900597.1;Parent=gene-AL42_RS20335;Dbxref=GenBank:WP_003900597.1;Name=WP_003900597.1;gbkey=CDS;gene=fadD26;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217446.2;locus_tag=AL42_RS20335;product=long-chain-fatty-acid--AMP ligase FAAL26/FadD26;protein_id=WP_003900597.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3224832 3230462 . + . ID=gene-AL42_RS20340;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=AL42_RS20340;old_locus_tag=AL42_03037 NZ_KK316784.1 Protein Homology CDS 3224832 3230462 . + 0 ID=cds-WP_031695434.1;Parent=gene-AL42_RS20340;Dbxref=GenBank:WP_031695434.1;Name=WP_031695434.1;gbkey=CDS;gene=ppsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217447.1;locus_tag=AL42_RS20340;product=phthiocerol type I polyketide synthase PpsA;protein_id=WP_031695434.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3230459 3235075 . + . ID=gene-AL42_RS20345;Name=ppsB;gbkey=Gene;gene=ppsB;gene_biotype=protein_coding;locus_tag=AL42_RS20345;old_locus_tag=AL42_03038 NZ_KK316784.1 Protein Homology CDS 3230459 3235075 . + 0 ID=cds-WP_003899547.1;Parent=gene-AL42_RS20345;Dbxref=GenBank:WP_003899547.1;Name=WP_003899547.1;gbkey=CDS;gene=ppsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217448.1;locus_tag=AL42_RS20345;product=phthiocerol type I polyketide synthase PpsB;protein_id=WP_003899547.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3235072 3241638 . + . ID=gene-AL42_RS20350;Name=ppsC;gbkey=Gene;gene=ppsC;gene_biotype=protein_coding;locus_tag=AL42_RS20350;old_locus_tag=AL42_03039 NZ_KK316784.1 Protein Homology CDS 3235072 3241638 . + 0 ID=cds-WP_003414837.1;Parent=gene-AL42_RS20350;Dbxref=GenBank:WP_003414837.1;Name=WP_003414837.1;gbkey=CDS;gene=ppsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217449.1;locus_tag=AL42_RS20350;product=phthiocerol type I polyketide synthase PpsC;protein_id=WP_003414837.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3241635 3247118 . + . ID=gene-AL42_RS20355;Name=ppsD;gbkey=Gene;gene=ppsD;gene_biotype=protein_coding;locus_tag=AL42_RS20355;old_locus_tag=AL42_03040 NZ_KK316784.1 Protein Homology CDS 3241635 3247118 . + 0 ID=cds-WP_003899549.1;Parent=gene-AL42_RS20355;Dbxref=GenBank:WP_003899549.1;Name=WP_003899549.1;gbkey=CDS;gene=ppsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217450.1;locus_tag=AL42_RS20355;product=phthiocerol type I polyketide synthase PpsD;protein_id=WP_003899549.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3247124 3251590 . + . ID=gene-AL42_RS20360;Name=ppsE;gbkey=Gene;gene=ppsE;gene_biotype=protein_coding;locus_tag=AL42_RS20360;old_locus_tag=AL42_03041 NZ_KK316784.1 Protein Homology CDS 3247124 3251590 . + 0 ID=cds-WP_003900602.1;Parent=gene-AL42_RS20360;Dbxref=GenBank:WP_003900602.1;Name=WP_003900602.1;gbkey=CDS;gene=ppsE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217451.1;locus_tag=AL42_RS20360;product=phthiocerol type I polyketide synthase PpsE;protein_id=WP_003900602.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3251601 3252596 . + . ID=gene-AL42_RS20365;Name=drrA;gbkey=Gene;gene=drrA;gene_biotype=protein_coding;locus_tag=AL42_RS20365;old_locus_tag=AL42_03042 NZ_KK316784.1 Protein Homology CDS 3251601 3252596 . + 0 ID=cds-WP_003901496.1;Parent=gene-AL42_RS20365;Dbxref=GenBank:WP_003901496.1;Name=WP_003901496.1;gbkey=CDS;gene=drrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217452.1;locus_tag=AL42_RS20365;product=daunorubicin ABC transporter ATP-binding protein DrrA;protein_id=WP_003901496.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3252593 3253462 . + . ID=gene-AL42_RS20370;Name=drrB;gbkey=Gene;gene=drrB;gene_biotype=protein_coding;locus_tag=AL42_RS20370;old_locus_tag=AL42_03043 NZ_KK316784.1 Protein Homology CDS 3252593 3253462 . + 0 ID=cds-WP_003414848.1;Parent=gene-AL42_RS20370;Dbxref=GenBank:WP_003414848.1;Name=WP_003414848.1;gbkey=CDS;gene=drrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217453.1;locus_tag=AL42_RS20370;product=daunorubicin ABC transporter permease DrrB;protein_id=WP_003414848.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3253459 3254289 . + . ID=gene-AL42_RS20375;Name=drrC;gbkey=Gene;gene=drrC;gene_biotype=protein_coding;locus_tag=AL42_RS20375;old_locus_tag=AL42_03044 NZ_KK316784.1 Protein Homology CDS 3253459 3254289 . + 0 ID=cds-WP_003414851.1;Parent=gene-AL42_RS20375;Dbxref=GenBank:WP_003414851.1;Name=WP_003414851.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;gene=drrC;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217454.1;locus_tag=AL42_RS20375;product=ABC transporter permease;protein_id=WP_003414851.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3254336 3255604 . + . ID=gene-AL42_RS20380;Name=AL42_RS20380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20380;old_locus_tag=AL42_03045 NZ_KK316784.1 Protein Homology CDS 3254336 3255604 . + 0 ID=cds-WP_003414853.1;Parent=gene-AL42_RS20380;Dbxref=GenBank:WP_003414853.1;Name=WP_003414853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217455.1;locus_tag=AL42_RS20380;product=phthiocerol/phthiodiolone dimycocerosyl transferase;protein_id=WP_003414853.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3255767 3262102 . - . ID=gene-AL42_RS20385;Name=mas;gbkey=Gene;gene=mas;gene_biotype=protein_coding;locus_tag=AL42_RS20385;old_locus_tag=AL42_03046 NZ_KK316784.1 Protein Homology CDS 3255767 3262102 . - 0 ID=cds-WP_003901497.1;Parent=gene-AL42_RS20385;Dbxref=GenBank:WP_003901497.1;Name=WP_003901497.1;gbkey=CDS;gene=mas;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217456.1;locus_tag=AL42_RS20385;product=mycocerosate synthase;protein_id=WP_003901497.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3262722 3264464 . + . ID=gene-AL42_RS20390;Name=fadD28;gbkey=Gene;gene=fadD28;gene_biotype=protein_coding;locus_tag=AL42_RS20390;old_locus_tag=AL42_03047 NZ_KK316784.1 Protein Homology CDS 3262722 3264464 . + 0 ID=cds-WP_003905978.1;Parent=gene-AL42_RS20390;Dbxref=GenBank:WP_003905978.1;Name=WP_003905978.1;gbkey=CDS;gene=fadD28;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217457.1;locus_tag=AL42_RS20390;product=fatty-acid--AMP ligase FAAL28/FadD28;protein_id=WP_003905978.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3264457 3267219 . + . ID=gene-AL42_RS20395;Name=mmpL7;gbkey=Gene;gene=mmpL7;gene_biotype=protein_coding;locus_tag=AL42_RS20395;old_locus_tag=AL42_03048 NZ_KK316784.1 Protein Homology CDS 3264457 3267219 . + 0 ID=cds-WP_003414861.1;Parent=gene-AL42_RS20395;Dbxref=GenBank:WP_003414861.1;Name=WP_003414861.1;gbkey=CDS;gene=mmpL7;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217458.1;locus_tag=AL42_RS20395;product=phthiocerol dimycocerosate RND transporter MmpL7;protein_id=WP_003414861.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3267851 3269092 . + . ID=gene-AL42_RS20400;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=AL42_RS20400;old_locus_tag=AL42_03049 NZ_KK316784.1 Protein Homology CDS 3267851 3269092 . + 0 ID=cds-WP_003414864.1;Parent=gene-AL42_RS20400;Dbxref=GenBank:WP_003414864.1;Name=WP_003414864.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003414864.1;locus_tag=AL42_RS20400;product=IS21-like element ISMbo1 family transposase;protein_id=WP_003414864.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 3269092 3269893 . + . ID=gene-AL42_RS0105355;Name=istB;gbkey=Gene;gene=istB;gene_biotype=pseudogene;locus_tag=AL42_RS0105355;old_locus_tag=AL42_03050;pseudo=true NZ_KK316784.1 Protein Homology CDS 3269092 3269893 . + 0 ID=cds-AL42_RS0105355;Parent=gene-AL42_RS0105355;Note=frameshifted;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_083047449.1;locus_tag=AL42_RS0105355;product=IS21-like element ISMbo1 family helper ATPase IstB;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 3270011 3270712 . - . ID=gene-AL42_RS20405;Name=lppX;gbkey=Gene;gene=lppX;gene_biotype=protein_coding;locus_tag=AL42_RS20405;old_locus_tag=AL42_03051 NZ_KK316784.1 Protein Homology CDS 3270011 3270712 . - 0 ID=cds-WP_003414872.1;Parent=gene-AL42_RS20405;Dbxref=GenBank:WP_003414872.1;Name=WP_003414872.1;gbkey=CDS;gene=lppX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217461.1;locus_tag=AL42_RS20405;product=LppX_LprAFG lipoprotein;protein_id=WP_003414872.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3270890 3277213 . - . ID=gene-AL42_RS0105360;Name=AL42_RS0105360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0105360;old_locus_tag=AL42_03052 NZ_KK316784.1 Protein Homology CDS 3270890 3277213 . - 0 ID=cds-WP_003910947.1;Parent=gene-AL42_RS0105360;Dbxref=GenBank:WP_003910947.1;Name=WP_003910947.1;Ontology_term=GO:0006633,GO:0030639,GO:0034081;gbkey=CDS;go_component=polyketide synthase complex|0034081||IEA;go_process=fatty acid biosynthetic process|0006633||IEA,polyketide biosynthetic process|0030639||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003910947.1;locus_tag=AL42_RS0105360;product=type I polyketide synthase;protein_id=WP_003910947.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3277231 3279348 . - . ID=gene-AL42_RS20410;Name=AL42_RS20410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20410;old_locus_tag=AL42_03054 NZ_KK316784.1 Protein Homology CDS 3277231 3279348 . - 0 ID=cds-WP_003414884.1;Parent=gene-AL42_RS20410;Dbxref=GenBank:WP_003414884.1;Name=WP_003414884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217464.1;locus_tag=AL42_RS20410;product=p-hydroxybenzoic acid--AMP ligase FadD22;protein_id=WP_003414884.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3279365 3279964 . - . ID=gene-AL42_RS20415;Name=AL42_RS20415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20415;old_locus_tag=AL42_03055 NZ_KK316784.1 Protein Homology CDS 3279365 3279964 . - 0 ID=cds-WP_003414887.1;Parent=gene-AL42_RS20415;Dbxref=GenBank:WP_003414887.1;Name=WP_003414887.1;Ontology_term=GO:0006744,GO:0008813,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=chorismate lyase activity|0008813||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217465.1;locus_tag=AL42_RS20415;product=chorismate--pyruvate lyase family protein;protein_id=WP_003414887.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3279990 3281738 . - . ID=gene-AL42_RS20420;Name=fadD29;gbkey=Gene;gene=fadD29;gene_biotype=protein_coding;gene_synonym=faaL29;locus_tag=AL42_RS20420;old_locus_tag=AL42_03056 NZ_KK316784.1 Protein Homology CDS 3279990 3281738 . - 0 ID=cds-WP_192929054.1;Parent=gene-AL42_RS20420;Dbxref=GenBank:WP_192929054.1;Name=WP_192929054.1;gbkey=CDS;gene=fadD29;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010950805.1;locus_tag=AL42_RS20420;product=4-hydroxyphenylalkanoate adenylyltransferase FadD29;protein_id=WP_192929054.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3282497 3283642 . - . ID=gene-AL42_RS20425;Name=AL42_RS20425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20425;old_locus_tag=AL42_03057 NZ_KK316784.1 Protein Homology CDS 3282497 3283642 . - 0 ID=cds-WP_003414891.1;Parent=gene-AL42_RS20425;Dbxref=GenBank:WP_003414891.1;Name=WP_003414891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217467.1;locus_tag=AL42_RS20425;product=phthiodiolone/phenolphthiodiolone dimycocerosates ketoreductase;protein_id=WP_003414891.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3283835 3284647 . + . ID=gene-AL42_RS20430;Name=AL42_RS20430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20430;old_locus_tag=AL42_03058 NZ_KK316784.1 Protein Homology CDS 3283835 3284647 . + 0 ID=cds-WP_003901501.1;Parent=gene-AL42_RS20430;Dbxref=GenBank:WP_003901501.1;Name=WP_003901501.1;Ontology_term=GO:0071770,GO:0008757;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=DIM/DIP cell wall layer assembly|0071770||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217468.1;locus_tag=AL42_RS20430;product=phthiotriol/phenolphthiotriol dimycocerosates methyltransferase;protein_id=WP_003901501.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3284673 3285929 . + . ID=gene-AL42_RS20435;Name=AL42_RS20435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20435;old_locus_tag=AL42_03059 NZ_KK316784.1 Protein Homology CDS 3284673 3285929 . + 0 ID=cds-WP_003414903.1;Parent=gene-AL42_RS20435;Dbxref=GenBank:WP_003414903.1;Name=WP_003414903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217469.1;locus_tag=AL42_RS20435;product=trans-acting enoyl reductase;protein_id=WP_003414903.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3286060 3286785 . - . ID=gene-AL42_RS20440;Name=AL42_RS20440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20440;old_locus_tag=AL42_03060 NZ_KK316784.1 Protein Homology CDS 3286060 3286785 . - 0 ID=cds-WP_003414905.1;Parent=gene-AL42_RS20440;Dbxref=GenBank:WP_003414905.1;Name=WP_003414905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217470.1;locus_tag=AL42_RS20440;product=[2%2C4-di-O-methyl-alpha-L-fucopyranosyl-(1->3)-alpha-L-rhamnopyranosyl-(1->3)-2-O-methyl-alpha-L-rhamnopyranosyl] dimycocerosyl phenol-phthiocerol 3'''-O-methyltransferase;protein_id=WP_003414905.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 3286974 3287938 . - . ID=gene-AL42_RS20445;Name=AL42_RS20445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS20445;old_locus_tag=AL42_03061;pseudo=true NZ_KK316784.1 Protein Homology CDS 3286974 3287938 . - 0 ID=cds-AL42_RS20445;Parent=gene-AL42_RS20445;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217471.1;locus_tag=AL42_RS20445;product=[2-O-methyl-alpha-L-fucopyranosyl-(1->3)-alpha-L-rhamnopyranosyl-(1->3)-2-O-methyl-alpha-L-rhamnopyranosyl] dimycocerosyl phenol-phthiocerol 4'''-O-methyltransferase;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 3288061 3288792 . + . ID=gene-AL42_RS20450;Name=AL42_RS20450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20450;old_locus_tag=AL42_03062 NZ_KK316784.1 Protein Homology CDS 3288061 3288792 . + 0 ID=cds-WP_003899556.1;Parent=gene-AL42_RS20450;Dbxref=GenBank:WP_003899556.1;Name=WP_003899556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217472.1;locus_tag=AL42_RS20450;product=[alpha-L-fucopyranosyl-(1->3)-alpha-L-rhamnopyranosyl-(1->3)-2-O-methyl-alpha-L-rhamnopyranosyl] dimycocerosyl phenol-phthiocerol 2'''-O-methyltransferase;protein_id=WP_003899556.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3288863 3289690 . + . ID=gene-AL42_RS20455;Name=AL42_RS20455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20455;old_locus_tag=AL42_03063 NZ_KK316784.1 Protein Homology CDS 3288863 3289690 . + 0 ID=cds-WP_003414909.1;Parent=gene-AL42_RS20455;Dbxref=GenBank:WP_003414909.1;Name=WP_003414909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217473.1;locus_tag=AL42_RS20455;product=PGL/p-HBAD biosynthesis glycosyltransferase;protein_id=WP_003414909.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3289838 3290044 . - . ID=gene-AL42_RS0105365;Name=AL42_RS0105365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0105365 NZ_KK316784.1 Protein Homology CDS 3289838 3290044 . - 0 ID=cds-WP_009939955.1;Parent=gene-AL42_RS0105365;Dbxref=GenBank:WP_009939955.1;Name=WP_009939955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009939955.1;locus_tag=AL42_RS0105365;product=hypothetical protein;protein_id=WP_009939955.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3290107 3291393 . - . ID=gene-AL42_RS20460;Name=AL42_RS20460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20460;old_locus_tag=AL42_03064 NZ_KK316784.1 Protein Homology CDS 3290107 3291393 . - 0 ID=cds-WP_003899557.1;Parent=gene-AL42_RS20460;Dbxref=GenBank:WP_003899557.1;Name=WP_003899557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217474.1;locus_tag=AL42_RS20460;product=PGL/p-HBAD biosynthesis glycosyltransferase;protein_id=WP_003899557.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3291494 3292231 . - . ID=gene-AL42_RS20465;Name=AL42_RS20465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20465;old_locus_tag=AL42_03065 NZ_KK316784.1 Protein Homology CDS 3291494 3292231 . - 0 ID=cds-WP_003414919.1;Parent=gene-AL42_RS20465;Dbxref=GenBank:WP_003414919.1;Name=WP_003414919.1;Ontology_term=GO:0071770,GO:0008757;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=DIM/DIP cell wall layer assembly|0071770||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217475.1;locus_tag=AL42_RS20465;product=rhamnosyl O-methyltransferase;protein_id=WP_003414919.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3292346 3292594 . - . ID=gene-AL42_RS20470;Name=AL42_RS20470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20470;old_locus_tag=AL42_03066 NZ_KK316784.1 Protein Homology CDS 3292346 3292594 . - 0 ID=cds-WP_003899558.1;Parent=gene-AL42_RS20470;Dbxref=GenBank:WP_003899558.1;Name=WP_003899558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217476.1;locus_tag=AL42_RS20470;product=hypothetical protein;protein_id=WP_003899558.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 3292595 3293065 . + . ID=gene-AL42_RS20475;Name=AL42_RS20475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS20475;old_locus_tag=AL42_03067;partial=true;pseudo=true;start_range=.,3292595 NZ_KK316784.1 Protein Homology CDS 3292595 3293065 . + 0 ID=cds-AL42_RS20475;Parent=gene-AL42_RS20475;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612244.1;locus_tag=AL42_RS20475;partial=true;product=transposase;pseudo=true;start_range=.,3292595;transl_table=11 NZ_KK316784.1 RefSeq gene 3293166 3294515 . - . ID=gene-AL42_RS20480;Name=AL42_RS20480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20480;old_locus_tag=AL42_03068 NZ_KK316784.1 Protein Homology CDS 3293166 3294515 . - 0 ID=cds-WP_003414922.1;Parent=gene-AL42_RS20480;Dbxref=GenBank:WP_003414922.1;Name=WP_003414922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217478.1;locus_tag=AL42_RS20480;product=PGL/p-HBAD biosynthesis rhamnosyltransferase;protein_id=WP_003414922.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3294629 3295849 . + . ID=gene-AL42_RS20485;Name=AL42_RS20485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20485;old_locus_tag=AL42_03069 NZ_KK316784.1 Protein Homology CDS 3294629 3295849 . + 0 ID=cds-WP_003414924.1;Parent=gene-AL42_RS20485;Dbxref=GenBank:WP_003414924.1;Name=WP_003414924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217479.1;locus_tag=AL42_RS20485;product=permease;protein_id=WP_003414924.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3295922 3296854 . + . ID=gene-AL42_RS20490;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=AL42_RS20490;old_locus_tag=AL42_03070 NZ_KK316784.1 Protein Homology CDS 3295922 3296854 . + 0 ID=cds-WP_003901503.1;Parent=gene-AL42_RS20490;Dbxref=GenBank:WP_003901503.1;Name=WP_003901503.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217480.1;locus_tag=AL42_RS20490;product=formyltetrahydrofolate deformylase;protein_id=WP_003901503.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 3297040 3297172 . + . ID=gene-AL42_RS28180;Name=AL42_RS28180;end_range=3297172,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS28180;partial=true;pseudo=true;start_range=.,3297040 NZ_KK316784.1 Protein Homology CDS 3297040 3297172 . + 0 ID=cds-AL42_RS28180;Parent=gene-AL42_RS28180;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3297172,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900311.1;locus_tag=AL42_RS28180;partial=true;product=ISL3-like element ISAar34 family transposase;pseudo=true;start_range=.,3297040;transl_table=11 NZ_KK316784.1 RefSeq gene 3297494 3297679 . + . ID=gene-AL42_RS20495;Name=AL42_RS20495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20495;old_locus_tag=AL42_03071 NZ_KK316784.1 Protein Homology CDS 3297494 3297679 . + 0 ID=cds-WP_003414994.1;Parent=gene-AL42_RS20495;Dbxref=GenBank:WP_003414994.1;Name=WP_003414994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003414994.1;locus_tag=AL42_RS20495;product=hypothetical protein;protein_id=WP_003414994.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3297723 3298208 . - . ID=gene-AL42_RS20500;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=AL42_RS20500;old_locus_tag=AL42_03072 NZ_KK316784.1 Protein Homology CDS 3297723 3298208 . - 0 ID=cds-WP_003414998.1;Parent=gene-AL42_RS20500;Dbxref=GenBank:WP_003414998.1;Name=WP_003414998.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217481.1;locus_tag=AL42_RS20500;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_003414998.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3298294 3298860 . - . ID=gene-AL42_RS20505;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=AL42_RS20505;old_locus_tag=AL42_03073 NZ_KK316784.1 Protein Homology CDS 3298294 3298860 . - 0 ID=cds-WP_003415001.1;Parent=gene-AL42_RS20505;Dbxref=GenBank:WP_003415001.1;Name=WP_003415001.1;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217482.1;locus_tag=AL42_RS20505;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=WP_003415001.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 3298859 3298961 . - . ID=gene-AL42_RS28185;Name=AL42_RS28185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS28185;partial=true;pseudo=true;start_range=.,3298859 NZ_KK316784.1 Protein Homology CDS 3298859 3298961 . - 0 ID=cds-AL42_RS28185;Parent=gene-AL42_RS28185;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215065.1;locus_tag=AL42_RS28185;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3298859;transl_table=11 NZ_KK316784.1 RefSeq gene 3299056 3302439 . - . ID=gene-AL42_RS20510;Name=pca;gbkey=Gene;gene=pca;gene_biotype=protein_coding;locus_tag=AL42_RS20510;old_locus_tag=AL42_03074 NZ_KK316784.1 Protein Homology CDS 3299056 3302439 . - 0 ID=cds-WP_003415003.1;Parent=gene-AL42_RS20510;Dbxref=GenBank:WP_003415003.1;Name=WP_003415003.1;Ontology_term=GO:0006090,GO:0006094,GO:0004736,GO:0005524,GO:0009374,GO:0046872;gbkey=CDS;gene=pca;go_function=pyruvate carboxylase activity|0004736||IEA,ATP binding|0005524||IEA,biotin binding|0009374||IEA,metal ion binding|0046872||IEA;go_process=pyruvate metabolic process|0006090||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217483.1;locus_tag=AL42_RS20510;product=pyruvate carboxylase;protein_id=WP_003415003.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3302464 3303096 . - . ID=gene-AL42_RS20515;Name=AL42_RS20515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20515;old_locus_tag=AL42_03075 NZ_KK316784.1 Protein Homology CDS 3302464 3303096 . - 0 ID=cds-WP_003415007.1;Parent=gene-AL42_RS20515;Dbxref=GenBank:WP_003415007.1;Name=WP_003415007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217484.1;locus_tag=AL42_RS20515;product=vitamin K epoxide reductase family protein;protein_id=WP_003415007.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3303102 3303869 . - . ID=gene-AL42_RS20520;Name=AL42_RS20520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20520;old_locus_tag=AL42_03076 NZ_KK316784.1 Protein Homology CDS 3303102 3303869 . - 0 ID=cds-WP_003415010.1;Parent=gene-AL42_RS20520;Dbxref=GenBank:WP_003415010.1;Name=WP_003415010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217485.1;locus_tag=AL42_RS20520;product=mycothiol-dependent reductase;protein_id=WP_003415010.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3303966 3305096 . - . ID=gene-AL42_RS20525;Name=lipN;gbkey=Gene;gene=lipN;gene_biotype=protein_coding;locus_tag=AL42_RS20525;old_locus_tag=AL42_03077 NZ_KK316784.1 Protein Homology CDS 3303966 3305096 . - 0 ID=cds-WP_003415015.1;Parent=gene-AL42_RS20525;Dbxref=GenBank:WP_003415015.1;Name=WP_003415015.1;gbkey=CDS;gene=lipN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217486.1;locus_tag=AL42_RS20525;product=lipase/esterase LipN;protein_id=WP_003415015.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 3305294 3305487 . + . ID=gene-AL42_RS20530;Name=AL42_RS20530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS20530;old_locus_tag=AL42_03078;partial=true;pseudo=true;start_range=.,3305294 NZ_KK316784.1 Protein Homology CDS 3305294 3305487 . + 0 ID=cds-AL42_RS20530;Parent=gene-AL42_RS20530;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019735927.1;locus_tag=AL42_RS20530;partial=true;product=aldo/keto reductase;pseudo=true;start_range=.,3305294;transl_table=11 NZ_KK316784.1 RefSeq gene 3305494 3306342 . + . ID=gene-AL42_RS20535;Name=AL42_RS20535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20535;old_locus_tag=AL42_03079 NZ_KK316784.1 Protein Homology CDS 3305494 3306342 . + 0 ID=cds-WP_003415022.1;Parent=gene-AL42_RS20535;Dbxref=GenBank:WP_003415022.1;Name=WP_003415022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217487.1;locus_tag=AL42_RS20535;product=aldo/keto reductase;protein_id=WP_003415022.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3306416 3307129 . - . ID=gene-AL42_RS20540;Name=AL42_RS20540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20540;old_locus_tag=AL42_03080 NZ_KK316784.1 Protein Homology CDS 3306416 3307129 . - 0 ID=cds-WP_003415024.1;Parent=gene-AL42_RS20540;Dbxref=GenBank:WP_003415024.1;Name=WP_003415024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217488.1;locus_tag=AL42_RS20540;product=HNH endonuclease family protein;protein_id=WP_003415024.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3307126 3309339 . - . ID=gene-AL42_RS20545;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=AL42_RS20545;old_locus_tag=AL42_03081 NZ_KK316784.1 Protein Homology CDS 3307126 3309339 . - 0 ID=cds-WP_003415026.1;Parent=gene-AL42_RS20545;Dbxref=GenBank:WP_003415026.1;Name=WP_003415026.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678;gbkey=CDS;gene=recG;go_function=DNA helicase activity|0003678||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217489.1;locus_tag=AL42_RS20545;product=ATP-dependent DNA helicase RecG;protein_id=WP_003415026.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3309342 3311003 . - . ID=gene-AL42_RS20550;Name=AL42_RS20550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20550;old_locus_tag=AL42_03082 NZ_KK316784.1 Protein Homology CDS 3309342 3311003 . - 0 ID=cds-WP_031721832.1;Parent=gene-AL42_RS20550;Dbxref=GenBank:WP_031721832.1;Name=WP_031721832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003902383.1;locus_tag=AL42_RS20550;product=DAK2 domain-containing protein;protein_id=WP_031721832.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3311245 3311439 . + . ID=gene-AL42_RS20555;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=AL42_RS20555;old_locus_tag=AL42_03084 NZ_KK316784.1 Protein Homology CDS 3311245 3311439 . + 0 ID=cds-WP_003415030.1;Parent=gene-AL42_RS20555;Dbxref=GenBank:WP_003415030.1;Name=WP_003415030.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030042.1;locus_tag=AL42_RS20555;product=50S ribosomal protein L28;protein_id=WP_003415030.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3311462 3312145 . - . ID=gene-AL42_RS20560;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=AL42_RS20560;old_locus_tag=AL42_03085 NZ_KK316784.1 Protein Homology CDS 3311462 3312145 . - 0 ID=cds-WP_003899565.1;Parent=gene-AL42_RS20560;Dbxref=GenBank:WP_003899565.1;Name=WP_003899565.1;Ontology_term=GO:0006284,GO:0004844;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217492.1;locus_tag=AL42_RS20560;product=uracil-DNA glycosylase;protein_id=WP_003899565.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3312178 3313179 . - . ID=gene-AL42_RS20565;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=AL42_RS20565;old_locus_tag=AL42_03086 NZ_KK316784.1 Protein Homology CDS 3312178 3313179 . - 0 ID=cds-WP_003415034.1;Parent=gene-AL42_RS20565;Dbxref=GenBank:WP_003415034.1;Name=WP_003415034.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217493.1;locus_tag=AL42_RS20565;product=thiamine-phosphate kinase;protein_id=WP_003415034.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3313176 3314555 . - . ID=gene-AL42_RS20570;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AL42_RS20570;old_locus_tag=AL42_03087 NZ_KK316784.1 Protein Homology CDS 3313176 3314555 . - 0 ID=cds-WP_003415037.1;Parent=gene-AL42_RS20570;Dbxref=GenBank:WP_003415037.1;Name=WP_003415037.1;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217494.1;locus_tag=AL42_RS20570;product=IS607 family element RNA-guided endonuclease TnpB;protein_id=WP_003415037.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3314555 3315139 . - . ID=gene-AL42_RS20575;Name=AL42_RS20575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20575;old_locus_tag=AL42_03088 NZ_KK316784.1 Protein Homology CDS 3314555 3315139 . - 0 ID=cds-WP_003415039.1;Parent=gene-AL42_RS20575;Dbxref=GenBank:WP_003415039.1;Name=WP_003415039.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217495.1;locus_tag=AL42_RS20575;product=IS607 family transposase;protein_id=WP_003415039.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3315351 3315896 . + . ID=gene-AL42_RS20580;Name=AL42_RS20580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20580;old_locus_tag=AL42_03089 NZ_KK316784.1 Protein Homology CDS 3315351 3315896 . + 0 ID=cds-WP_003415041.1;Parent=gene-AL42_RS20580;Dbxref=GenBank:WP_003415041.1;Name=WP_003415041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217496.1;locus_tag=AL42_RS20580;product=DUF3515 domain-containing protein;protein_id=WP_003415041.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3316010 3317131 . - . ID=gene-AL42_RS20585;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=AL42_RS20585;old_locus_tag=AL42_03090 NZ_KK316784.1 Protein Homology CDS 3316010 3317131 . - 0 ID=cds-WP_003415088.1;Parent=gene-AL42_RS20585;Dbxref=GenBank:WP_003415088.1;Name=WP_003415088.1;gbkey=CDS;gene=ddlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217497.1;locus_tag=AL42_RS20585;product=D-alanine--D-alanine ligase DdlA;protein_id=WP_003415088.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3317209 3318213 . - . ID=gene-AL42_RS20590;Name=AL42_RS20590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20590;old_locus_tag=AL42_03091 NZ_KK316784.1 Protein Homology CDS 3317209 3318213 . - 0 ID=cds-WP_003415091.1;Parent=gene-AL42_RS20590;Dbxref=GenBank:WP_003415091.1;Name=WP_003415091.1;Ontology_term=GO:0046167,GO:0047952,GO:0051287,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA,NAD binding|0051287||IEA;go_process=glycerol-3-phosphate biosynthetic process|0046167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217498.1;locus_tag=AL42_RS20590;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_003415091.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3318332 3318976 . + . ID=gene-AL42_RS20595;Name=cofC;gbkey=Gene;gene=cofC;gene_biotype=protein_coding;locus_tag=AL42_RS20595;old_locus_tag=AL42_03092 NZ_KK316784.1 Protein Homology CDS 3318332 3318976 . + 0 ID=cds-WP_003415094.1;Parent=gene-AL42_RS20595;Dbxref=GenBank:WP_003415094.1;Name=WP_003415094.1;Ontology_term=GO:0043814;gbkey=CDS;gene=cofC;go_function=phospholactate guanylyltransferase activity|0043814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217499.1;locus_tag=AL42_RS20595;product=2-phospho-L-lactate guanylyltransferase;protein_id=WP_003415094.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3319068 3321296 . + . ID=gene-AL42_RS20600;Name=AL42_RS20600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20600;old_locus_tag=AL42_03093 NZ_KK316784.1 Protein Homology CDS 3319068 3321296 . + 0 ID=cds-WP_003415097.1;Parent=gene-AL42_RS20600;Dbxref=GenBank:WP_003415097.1;Name=WP_003415097.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217500.1;locus_tag=AL42_RS20600;product=RNA degradosome polyphosphate kinase;protein_id=WP_003415097.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3321379 3322332 . + . ID=gene-AL42_RS20605;Name=AL42_RS20605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20605;old_locus_tag=AL42_03094 NZ_KK316784.1 Protein Homology CDS 3321379 3322332 . + 0 ID=cds-WP_003899569.1;Parent=gene-AL42_RS20605;Dbxref=GenBank:WP_003899569.1;Name=WP_003899569.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217501.1;locus_tag=AL42_RS20605;product=8-oxo-(d)GTP phosphatase MutT1;protein_id=WP_003899569.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3322390 3323034 . - . ID=gene-AL42_RS20610;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=AL42_RS20610;old_locus_tag=AL42_03095 NZ_KK316784.1 Protein Homology CDS 3322390 3323034 . - 0 ID=cds-WP_003415107.1;Parent=gene-AL42_RS20610;Dbxref=GenBank:WP_003415107.1;Name=WP_003415107.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217502.1;locus_tag=AL42_RS20610;product=DNA-binding protein HupB;protein_id=WP_003415107.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3323247 3323843 . - . ID=gene-AL42_RS20615;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=AL42_RS20615;old_locus_tag=AL42_03096 NZ_KK316784.1 Protein Homology CDS 3323247 3323843 . - 0 ID=cds-WP_003415110.1;Parent=gene-AL42_RS20615;Dbxref=GenBank:WP_003415110.1;Name=WP_003415110.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217503.1;locus_tag=AL42_RS20615;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_003415110.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3323868 3325289 . - . ID=gene-AL42_RS20620;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=AL42_RS20620;old_locus_tag=AL42_03097 NZ_KK316784.1 Protein Homology CDS 3323868 3325289 . - 0 ID=cds-WP_003899570.1;Parent=gene-AL42_RS20620;Dbxref=GenBank:WP_003899570.1;Name=WP_003899570.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217504.1;locus_tag=AL42_RS20620;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_003899570.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3325361 3326062 . + . ID=gene-AL42_RS20625;Name=AL42_RS20625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20625;old_locus_tag=AL42_03098 NZ_KK316784.1 Protein Homology CDS 3325361 3326062 . + 0 ID=cds-WP_003415115.1;Parent=gene-AL42_RS20625;Dbxref=GenBank:WP_003415115.1;Name=WP_003415115.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217505.1;locus_tag=AL42_RS20625;product=IclR family transcriptional regulator;protein_id=WP_003415115.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3326073 3326933 . - . ID=gene-AL42_RS20630;Name=AL42_RS20630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20630;old_locus_tag=AL42_03099 NZ_KK316784.1 Protein Homology CDS 3326073 3326933 . - 0 ID=cds-WP_003415118.1;Parent=gene-AL42_RS20630;Dbxref=GenBank:WP_003415118.1;Name=WP_003415118.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217506.1;locus_tag=AL42_RS20630;product=class I SAM-dependent methyltransferase;protein_id=WP_003415118.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3327196 3327687 . + . ID=gene-AL42_RS20635;Name=AL42_RS20635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20635;old_locus_tag=AL42_03100 NZ_KK316784.1 Protein Homology CDS 3327196 3327687 . + 0 ID=cds-WP_003899572.1;Parent=gene-AL42_RS20635;Dbxref=GenBank:WP_003899572.1;Name=WP_003899572.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217507.1;locus_tag=AL42_RS20635;product=PPOX class F420-dependent oxidoreductase;protein_id=WP_003899572.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3327761 3327833 . - . ID=gene-AL42_RS20640;Name=AL42_RS20640;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL42_RS20640;old_locus_tag=AL42_03101 NZ_KK316784.1 tRNAscan-SE tRNA 3327761 3327833 . - . ID=rna-AL42_RS20640;Parent=gene-AL42_RS20640;anticodon=(pos:complement(3327797..3327799));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS20640;product=tRNA-Glu NZ_KK316784.1 tRNAscan-SE exon 3327761 3327833 . - . ID=exon-AL42_RS20640-1;Parent=rna-AL42_RS20640;anticodon=(pos:complement(3327797..3327799));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS20640;product=tRNA-Glu NZ_KK316784.1 RefSeq gene 3327873 3327944 . - . ID=gene-AL42_RS20645;Name=AL42_RS20645;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL42_RS20645;old_locus_tag=AL42_03102 NZ_KK316784.1 tRNAscan-SE tRNA 3327873 3327944 . - . ID=rna-AL42_RS20645;Parent=gene-AL42_RS20645;anticodon=(pos:complement(3327909..3327911));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS20645;product=tRNA-Gln NZ_KK316784.1 tRNAscan-SE exon 3327873 3327944 . - . ID=exon-AL42_RS20645-1;Parent=rna-AL42_RS20645;anticodon=(pos:complement(3327909..3327911));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS20645;product=tRNA-Gln NZ_KK316784.1 RefSeq gene 3328019 3329491 . - . ID=gene-AL42_RS20650;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=AL42_RS20650;old_locus_tag=AL42_03103 NZ_KK316784.1 Protein Homology CDS 3328019 3329491 . - 0 ID=cds-WP_003415122.1;Parent=gene-AL42_RS20650;Dbxref=GenBank:WP_003415122.1;Name=WP_003415122.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177915.1;locus_tag=AL42_RS20650;product=glutamate--tRNA ligase;protein_id=WP_003415122.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3329488 3330285 . - . ID=gene-AL42_RS20655;Name=AL42_RS20655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20655;old_locus_tag=AL42_03104 NZ_KK316784.1 Protein Homology CDS 3329488 3330285 . - 0 ID=cds-WP_003415138.1;Parent=gene-AL42_RS20655;Dbxref=GenBank:WP_003415138.1;Name=WP_003415138.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003415138.1;locus_tag=AL42_RS20655;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_003415138.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 3330525 3331538 . + . ID=gene-AL42_RS20660;Name=AL42_RS20660;end_range=3331538,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS20660;old_locus_tag=AL42_03105;partial=true;pseudo=true NZ_KK316784.1 Protein Homology CDS 3330525 3331538 . + 0 ID=cds-AL42_RS20660;Parent=gene-AL42_RS20660;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0022857;end_range=3331538,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.6;locus_tag=AL42_RS20660;partial=true;product=MFS transporter;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 3331672 3332682 . - . ID=gene-AL42_RS26345;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=AL42_RS26345;old_locus_tag=AL42_03106 NZ_KK316784.1 Protein Homology CDS 3331672 3332682 . - 0 ID=cds-WP_003899576.1;Parent=gene-AL42_RS26345;Dbxref=GenBank:WP_003899576.1;Name=WP_003899576.1;Ontology_term=GO:0009098,GO:0000287,GO:0003862,GO:0051287;gbkey=CDS;gene=leuB;go_function=magnesium ion binding|0000287||IEA,3-isopropylmalate dehydrogenase activity|0003862||IEA,NAD binding|0051287||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217511.1;locus_tag=AL42_RS26345;product=3-isopropylmalate dehydrogenase;protein_id=WP_003899576.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3332697 3334283 . - . ID=gene-AL42_RS20665;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=AL42_RS20665;old_locus_tag=AL42_03107 NZ_KK316784.1 Protein Homology CDS 3332697 3334283 . - 0 ID=cds-WP_003899578.1;Parent=gene-AL42_RS20665;Dbxref=GenBank:WP_003899578.1;Name=WP_003899578.1;Ontology_term=GO:0006564,GO:0004617;gbkey=CDS;gene=serA;go_function=phosphoglycerate dehydrogenase activity|0004617||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177916.1;locus_tag=AL42_RS20665;product=phosphoglycerate dehydrogenase;protein_id=WP_003899578.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3334313 3335755 . + . ID=gene-AL42_RS20670;Name=AL42_RS20670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20670;old_locus_tag=AL42_03108 NZ_KK316784.1 Protein Homology CDS 3334313 3335755 . + 0 ID=cds-WP_003415150.1;Parent=gene-AL42_RS20670;Dbxref=GenBank:WP_003415150.1;Name=WP_003415150.1;Ontology_term=GO:0016116,GO:0016117,GO:0009055,GO:0016491;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA;go_process=carotenoid metabolic process|0016116||IEA,carotenoid biosynthetic process|0016117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217513.1;locus_tag=AL42_RS20670;product=phytoene desaturase family protein;protein_id=WP_003415150.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3335947 3336147 . - . ID=gene-AL42_RS0105375;Name=AL42_RS0105375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0105375 NZ_KK316784.1 Protein Homology CDS 3335947 3336147 . - 0 ID=cds-WP_003900610.1;Parent=gene-AL42_RS0105375;Dbxref=GenBank:WP_003900610.1;Name=WP_003900610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003908129.1;locus_tag=AL42_RS0105375;product=DUF433 domain-containing protein;protein_id=WP_003900610.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3336077 3336490 . + . ID=gene-AL42_RS27720;Name=AL42_RS27720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27720;old_locus_tag=AL42_03109 NZ_KK316784.1 Protein Homology CDS 3336077 3336490 . + 0 ID=cds-WP_223695529.1;Parent=gene-AL42_RS27720;Dbxref=GenBank:WP_223695529.1;Name=WP_223695529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217514.1;locus_tag=AL42_RS27720;product=hypothetical protein;protein_id=WP_223695529.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3336439 3336633 . - . ID=gene-AL42_RS27725;Name=AL42_RS27725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27725;old_locus_tag=AL42_03110 NZ_KK316784.1 Protein Homology CDS 3336439 3336633 . - 0 ID=cds-WP_229298038.1;Parent=gene-AL42_RS27725;Dbxref=GenBank:WP_229298038.1;Name=WP_229298038.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012876.6;locus_tag=AL42_RS27725;product=hypothetical protein;protein_id=WP_229298038.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3336816 3337781 . + . ID=gene-AL42_RS20680;Name=lppY;gbkey=Gene;gene=lppY;gene_biotype=protein_coding;locus_tag=AL42_RS20680;old_locus_tag=AL42_03111 NZ_KK316784.1 Protein Homology CDS 3336816 3337781 . + 0 ID=cds-WP_003901513.1;Parent=gene-AL42_RS20680;Dbxref=GenBank:WP_003901513.1;Name=WP_003901513.1;gbkey=CDS;gene=lppY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217515.1;locus_tag=AL42_RS20680;product=DUF1259 domain-containing protein;protein_id=WP_003901513.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3337826 3338485 . + . ID=gene-AL42_RS20685;Name=AL42_RS20685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20685;old_locus_tag=AL42_03112 NZ_KK316784.1 Protein Homology CDS 3337826 3338485 . + 0 ID=cds-WP_003415160.1;Parent=gene-AL42_RS20685;Dbxref=GenBank:WP_003415160.1;Name=WP_003415160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217516.1;locus_tag=AL42_RS20685;product=ABC transporter permease;protein_id=WP_003415160.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3338799 3339800 . - . ID=gene-AL42_RS20690;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=AL42_RS20690;old_locus_tag=AL42_03113 NZ_KK316784.1 Protein Homology CDS 3338799 3339800 . - 0 ID=cds-WP_003899581.1;Parent=gene-AL42_RS20690;Dbxref=GenBank:WP_003899581.1;Name=WP_003899581.1;gbkey=CDS;gene=ilvC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217517.3;locus_tag=AL42_RS20690;product=ketol-acid reductoisomerase;protein_id=WP_003899581.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3339838 3340344 . - . ID=gene-AL42_RS20695;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=AL42_RS20695;old_locus_tag=AL42_03114 NZ_KK316784.1 Protein Homology CDS 3339838 3340344 . - 0 ID=cds-WP_003415167.1;Parent=gene-AL42_RS20695;Dbxref=GenBank:WP_003415167.1;Name=WP_003415167.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217518.1;locus_tag=AL42_RS20695;product=acetolactate synthase small subunit;protein_id=WP_003415167.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3340344 3342200 . - . ID=gene-AL42_RS20700;Name=AL42_RS20700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20700;old_locus_tag=AL42_03115 NZ_KK316784.1 Protein Homology CDS 3340344 3342200 . - 0 ID=cds-WP_003415168.1;Parent=gene-AL42_RS20700;Dbxref=GenBank:WP_003415168.1;Name=WP_003415168.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177917.1;locus_tag=AL42_RS20700;product=acetolactate synthase large subunit;protein_id=WP_003415168.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3342523 3342900 . + . ID=gene-AL42_RS20705;Name=AL42_RS20705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20705;old_locus_tag=AL42_03116 NZ_KK316784.1 Protein Homology CDS 3342523 3342900 . + 0 ID=cds-WP_003900612.1;Parent=gene-AL42_RS20705;Dbxref=GenBank:WP_003900612.1;Name=WP_003900612.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900612.1;locus_tag=AL42_RS20705;product=PH domain-containing protein;protein_id=WP_003900612.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3342907 3343746 . - . ID=gene-AL42_RS20710;Name=AL42_RS20710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20710;old_locus_tag=AL42_03117 NZ_KK316784.1 Protein Homology CDS 3342907 3343746 . - 0 ID=cds-WP_003415171.1;Parent=gene-AL42_RS20710;Dbxref=GenBank:WP_003415171.1;Name=WP_003415171.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217521.1;locus_tag=AL42_RS20710;product=DoxX family protein;protein_id=WP_003415171.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3343923 3345044 . + . ID=gene-AL42_RS20715;Name=lppZ;gbkey=Gene;gene=lppZ;gene_biotype=protein_coding;locus_tag=AL42_RS20715;old_locus_tag=AL42_03118 NZ_KK316784.1 Protein Homology CDS 3343923 3345044 . + 0 ID=cds-WP_003415173.1;Parent=gene-AL42_RS20715;Dbxref=GenBank:WP_003415173.1;Name=WP_003415173.1;gbkey=CDS;gene=lppZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217522.1;locus_tag=AL42_RS20715;product=PQQ-dependent sugar dehydrogenase;protein_id=WP_003415173.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3345050 3345664 . - . ID=gene-AL42_RS20720;Name=AL42_RS20720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20720;old_locus_tag=AL42_03119 NZ_KK316784.1 Protein Homology CDS 3345050 3345664 . - 0 ID=cds-WP_003415174.1;Parent=gene-AL42_RS20720;Dbxref=GenBank:WP_003415174.1;Name=WP_003415174.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217523.1;locus_tag=AL42_RS20720;product=flavin reductase family protein;protein_id=WP_003415174.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3345858 3346481 . + . ID=gene-AL42_RS20725;Name=AL42_RS20725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20725;old_locus_tag=AL42_03120 NZ_KK316784.1 Protein Homology CDS 3345858 3346481 . + 0 ID=cds-WP_003899584.1;Parent=gene-AL42_RS20725;Dbxref=GenBank:WP_003899584.1;Name=WP_003899584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217524.1;locus_tag=AL42_RS20725;product=MgtC/SapB family protein;protein_id=WP_003899584.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3346478 3348007 . - . ID=gene-AL42_RS20730;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=AL42_RS20730;old_locus_tag=AL42_03121 NZ_KK316784.1 Protein Homology CDS 3346478 3348007 . - 0 ID=cds-WP_003415248.1;Parent=gene-AL42_RS20730;Dbxref=GenBank:WP_003415248.1;Name=WP_003415248.1;Ontology_term=GO:0016884;gbkey=CDS;gene=gatB;go_function=carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217525.1;locus_tag=AL42_RS20730;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=WP_003415248.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3348037 3349068 . - . ID=gene-AL42_RS20735;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=AL42_RS20735;old_locus_tag=AL42_03122 NZ_KK316784.1 Protein Homology CDS 3348037 3349068 . - 0 ID=cds-WP_003415251.1;Parent=gene-AL42_RS20735;Dbxref=GenBank:WP_003415251.1;Name=WP_003415251.1;Ontology_term=GO:0006002,GO:0003872,GO:0005524,GO:0046872;gbkey=CDS;gene=pfkA;go_function=6-phosphofructokinase activity|0003872||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217526.1;locus_tag=AL42_RS20735;product=ATP-dependent 6-phosphofructokinase;protein_id=WP_003415251.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3349164 3350648 . - . ID=gene-AL42_RS20740;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=AL42_RS20740;old_locus_tag=AL42_03123 NZ_KK316784.1 Protein Homology CDS 3349164 3350648 . - 0 ID=cds-WP_003900613.1;Parent=gene-AL42_RS20740;Dbxref=GenBank:WP_003900613.1;Name=WP_003900613.1;Ontology_term=GO:0006412,GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatA;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=translation|0006412||IEA,glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217527.2;locus_tag=AL42_RS20740;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;protein_id=WP_003900613.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3350645 3350944 . - . ID=gene-AL42_RS20745;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=AL42_RS20745;old_locus_tag=AL42_03124 NZ_KK316784.1 Protein Homology CDS 3350645 3350944 . - 0 ID=cds-WP_003415256.1;Parent=gene-AL42_RS20745;Dbxref=GenBank:WP_003415256.1;Name=WP_003415256.1;Ontology_term=GO:0006424,GO:0006450,GO:0050567,GO:0030956;gbkey=CDS;gene=gatC;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA,regulation of translational fidelity|0006450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217528.1;locus_tag=AL42_RS20745;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=WP_003415256.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3351029 3351685 . + . ID=gene-AL42_RS20750;Name=AL42_RS20750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20750;old_locus_tag=AL42_03125 NZ_KK316784.1 Protein Homology CDS 3351029 3351685 . + 0 ID=cds-WP_003901515.1;Parent=gene-AL42_RS20750;Dbxref=GenBank:WP_003901515.1;Name=WP_003901515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217529.1;locus_tag=AL42_RS20750;product=ACT domain-containing protein;protein_id=WP_003901515.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3351759 3353834 . - . ID=gene-AL42_RS20755;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=AL42_RS20755;old_locus_tag=AL42_03126 NZ_KK316784.1 Protein Homology CDS 3351759 3353834 . - 0 ID=cds-WP_003415263.1;Parent=gene-AL42_RS20755;Dbxref=GenBank:WP_003415263.1;Name=WP_003415263.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217530.1;locus_tag=AL42_RS20755;product=NAD-dependent DNA ligase LigA;protein_id=WP_003415263.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3353865 3354878 . - . ID=gene-AL42_RS20760;Name=AL42_RS20760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20760;old_locus_tag=AL42_03127 NZ_KK316784.1 Protein Homology CDS 3353865 3354878 . - 0 ID=cds-WP_003902392.1;Parent=gene-AL42_RS20760;Dbxref=GenBank:WP_003902392.1;Name=WP_003902392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217531.1;locus_tag=AL42_RS20760;product=uroporphyrinogen decarboxylase/cobalamine-independent methonine synthase family protein;protein_id=WP_003902392.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3354972 3355601 . + . ID=gene-AL42_RS20765;Name=lpqA;gbkey=Gene;gene=lpqA;gene_biotype=protein_coding;locus_tag=AL42_RS20765;old_locus_tag=AL42_03128 NZ_KK316784.1 Protein Homology CDS 3354972 3355601 . + 0 ID=cds-WP_003415270.1;Parent=gene-AL42_RS20765;Dbxref=GenBank:WP_003415270.1;Name=WP_003415270.1;gbkey=CDS;gene=lpqA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217532.1;locus_tag=AL42_RS20765;product=sensor domain-containing protein;protein_id=WP_003415270.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3355704 3356066 . - . ID=gene-AL42_RS20770;Name=esxQ;gbkey=Gene;gene=esxQ;gene_biotype=protein_coding;locus_tag=AL42_RS20770;old_locus_tag=AL42_03129 NZ_KK316784.1 Protein Homology CDS 3355704 3356066 . - 0 ID=cds-WP_003415272.1;Parent=gene-AL42_RS20770;Dbxref=GenBank:WP_003415272.1;Name=WP_003415272.1;gbkey=CDS;gene=esxQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217533.1;locus_tag=AL42_RS20770;product=type VII secretion system ESX-3 effector EsxQ;protein_id=WP_003415272.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3356153 3357457 . - . ID=gene-AL42_RS20775;Name=AL42_RS20775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20775;old_locus_tag=AL42_03130 NZ_KK316784.1 Protein Homology CDS 3356153 3357457 . - 0 ID=cds-WP_003910691.1;Parent=gene-AL42_RS20775;Dbxref=GenBank:WP_003910691.1;Name=WP_003910691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177918.1;locus_tag=AL42_RS20775;product=PPE family protein;protein_id=WP_003910691.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3358854 3359258 . + . ID=gene-AL42_RS20780;Name=AL42_RS20780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20780;old_locus_tag=AL42_03131;partial=true;start_range=.,3358854 NZ_KK316784.1 Protein Homology CDS 3358854 3359258 . + 0 ID=cds-WP_009935543.1;Parent=gene-AL42_RS20780;Dbxref=GenBank:WP_009935543.1;Name=WP_009935543.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL42_RS20780;partial=true;product=integrase core domain-containing protein;protein_id=WP_009935543.1;start_range=.,3358854;transl_table=11 NZ_KK316784.1 RefSeq gene 3359312 3359605 . - . ID=gene-AL42_RS20785;Name=esxG;gbkey=Gene;gene=esxG;gene_biotype=protein_coding;locus_tag=AL42_RS20785;old_locus_tag=AL42_03132 NZ_KK316784.1 Protein Homology CDS 3359312 3359605 . - 0 ID=cds-WP_003415342.1;Parent=gene-AL42_RS20785;Dbxref=GenBank:WP_003415342.1;Name=WP_003415342.1;gbkey=CDS;gene=esxG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177919.1;locus_tag=AL42_RS20785;product=type VII secretion system protein EsxG;protein_id=WP_003415342.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3359652 3360959 . - . ID=gene-AL42_RS20790;Name=AL42_RS20790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20790;old_locus_tag=AL42_03133 NZ_KK316784.1 Protein Homology CDS 3359652 3360959 . - 0 ID=cds-WP_010950814.1;Parent=gene-AL42_RS20790;Dbxref=GenBank:WP_010950814.1;Name=WP_010950814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016330432.1;locus_tag=AL42_RS20790;product=PPE family protein;protein_id=WP_010950814.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3360956 3361270 . - . ID=gene-AL42_RS20795;Name=AL42_RS20795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20795;old_locus_tag=AL42_03134 NZ_KK316784.1 Protein Homology CDS 3360956 3361270 . - 0 ID=cds-WP_003415766.1;Parent=gene-AL42_RS20795;Dbxref=GenBank:WP_003415766.1;Name=WP_003415766.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177685.1;locus_tag=AL42_RS20795;product=PE family protein;protein_id=WP_003415766.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3361652 3362899 . - . ID=gene-AL42_RS20800;Name=AL42_RS20800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20800;old_locus_tag=AL42_03135 NZ_KK316784.1 Protein Homology CDS 3361652 3362899 . - 0 ID=cds-WP_003901078.1-3;Parent=gene-AL42_RS20800;Dbxref=GenBank:WP_003901078.1;Name=WP_003901078.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215563.1;locus_tag=AL42_RS20800;product=IS256-like element IS1081 family transposase;protein_id=WP_003901078.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3363062 3364165 . - . ID=gene-AL42_RS20805;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=AL42_RS20805;old_locus_tag=AL42_03136 NZ_KK316784.1 Protein Homology CDS 3363062 3364165 . - 0 ID=cds-WP_003415909.1;Parent=gene-AL42_RS20805;Dbxref=GenBank:WP_003415909.1;Name=WP_003415909.1;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217540.1;locus_tag=AL42_RS20805;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_003415909.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3364162 3365343 . - . ID=gene-AL42_RS20810;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;locus_tag=AL42_RS20810;old_locus_tag=AL42_03137 NZ_KK316784.1 Protein Homology CDS 3364162 3365343 . - 0 ID=cds-WP_003415911.1;Parent=gene-AL42_RS20810;Dbxref=GenBank:WP_003415911.1;Name=WP_003415911.1;Ontology_term=GO:0030170;gbkey=CDS;gene=iscS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217541.1;locus_tag=AL42_RS20810;product=cysteine desulfurase family protein;protein_id=WP_003415911.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3365440 3366354 . - . ID=gene-AL42_RS20815;Name=AL42_RS20815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20815;old_locus_tag=AL42_03138 NZ_KK316784.1 Protein Homology CDS 3365440 3366354 . - 0 ID=cds-WP_003415914.1;Parent=gene-AL42_RS20815;Dbxref=GenBank:WP_003415914.1;Name=WP_003415914.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217542.1;locus_tag=AL42_RS20815;product=lysophospholipid acyltransferase family protein;protein_id=WP_003415914.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3366351 3367196 . - . ID=gene-AL42_RS20820;Name=AL42_RS20820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20820;old_locus_tag=AL42_03139 NZ_KK316784.1 Protein Homology CDS 3366351 3367196 . - 0 ID=cds-WP_003900617.1;Parent=gene-AL42_RS20820;Dbxref=GenBank:WP_003900617.1;Name=WP_003900617.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217543.2;locus_tag=AL42_RS20820;product=GNAT family N-acetyltransferase;protein_id=WP_003900617.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3367352 3368308 . - . ID=gene-AL42_RS20825;Name=fixB;gbkey=Gene;gene=fixB;gene_biotype=protein_coding;locus_tag=AL42_RS20825;old_locus_tag=AL42_03140 NZ_KK316784.1 Protein Homology CDS 3367352 3368308 . - 0 ID=cds-WP_003899889.1;Parent=gene-AL42_RS20825;Dbxref=GenBank:WP_003899889.1;Name=WP_003899889.1;Ontology_term=GO:0009055,GO:0050660;gbkey=CDS;gene=fixB;go_function=electron transfer activity|0009055||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217544.1;locus_tag=AL42_RS20825;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_003899889.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3368347 3369147 . - . ID=gene-AL42_RS20830;Name=fixA;gbkey=Gene;gene=fixA;gene_biotype=protein_coding;locus_tag=AL42_RS20830;old_locus_tag=AL42_03141 NZ_KK316784.1 Protein Homology CDS 3368347 3369147 . - 0 ID=cds-WP_003415921.1;Parent=gene-AL42_RS20830;Dbxref=GenBank:WP_003415921.1;Name=WP_003415921.1;Ontology_term=GO:0009055;gbkey=CDS;gene=fixA;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217545.1;locus_tag=AL42_RS20830;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WP_003415921.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3369378 3370202 . + . ID=gene-AL42_RS20835;Name=AL42_RS20835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20835;old_locus_tag=AL42_03142 NZ_KK316784.1 Protein Homology CDS 3369378 3370202 . + 0 ID=cds-WP_003415922.1;Parent=gene-AL42_RS20835;Dbxref=GenBank:WP_003415922.1;Name=WP_003415922.1;Ontology_term=GO:0008757;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217546.1;locus_tag=AL42_RS20835;product=class I SAM-dependent methyltransferase;protein_id=WP_003415922.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3370199 3371779 . + . ID=gene-AL42_RS20840;Name=AL42_RS20840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20840;old_locus_tag=AL42_03143 NZ_KK316784.1 Protein Homology CDS 3370199 3371779 . + 0 ID=cds-WP_003899891.1;Parent=gene-AL42_RS20840;Dbxref=GenBank:WP_003899891.1;Name=WP_003899891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217547.1;locus_tag=AL42_RS20840;product=1%2C4-alpha-glucan branching protein domain-containing protein;protein_id=WP_003899891.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3371811 3373055 . + . ID=gene-AL42_RS20845;Name=AL42_RS20845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20845;old_locus_tag=AL42_03144 NZ_KK316784.1 Protein Homology CDS 3371811 3373055 . + 0 ID=cds-WP_003415928.1;Parent=gene-AL42_RS20845;Dbxref=GenBank:WP_003415928.1;Name=WP_003415928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217548.1;locus_tag=AL42_RS20845;product=glycogen synthase;protein_id=WP_003415928.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3373089 3373478 . + . ID=gene-AL42_RS20850;Name=AL42_RS20850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20850;old_locus_tag=AL42_03145 NZ_KK316784.1 Protein Homology CDS 3373089 3373478 . + 0 ID=cds-WP_003415930.1;Parent=gene-AL42_RS20850;Dbxref=GenBank:WP_003415930.1;Name=WP_003415930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004837058.1;locus_tag=AL42_RS20850;product=hypothetical protein;protein_id=WP_003415930.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3373657 3374205 . + . ID=gene-AL42_RS20855;Name=AL42_RS20855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20855;old_locus_tag=AL42_03146 NZ_KK316784.1 Protein Homology CDS 3373657 3374205 . + 0 ID=cds-WP_003415932.1;Parent=gene-AL42_RS20855;Dbxref=GenBank:WP_003415932.1;Name=WP_003415932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217549.1;locus_tag=AL42_RS20855;product=anti-apoptotic protein;protein_id=WP_003415932.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3374296 3375033 . - . ID=gene-AL42_RS20860;Name=AL42_RS20860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20860;old_locus_tag=AL42_03147 NZ_KK316784.1 Protein Homology CDS 3374296 3375033 . - 0 ID=cds-WP_003415934.1;Parent=gene-AL42_RS20860;Dbxref=GenBank:WP_003415934.1;Name=WP_003415934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015288424.1;locus_tag=AL42_RS20860;product=acyltransferase;protein_id=WP_003415934.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3375491 3376738 . + . ID=gene-AL42_RS20865;Name=AL42_RS20865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20865;old_locus_tag=AL42_03148 NZ_KK316784.1 Protein Homology CDS 3375491 3376738 . + 0 ID=cds-WP_193586988.1;Parent=gene-AL42_RS20865;Dbxref=GenBank:WP_193586988.1;Name=WP_193586988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011725741.1;locus_tag=AL42_RS20865;product=outer membrane protein assembly factor BamB family protein;protein_id=WP_193586988.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3376735 3377418 . - . ID=gene-AL42_RS20870;Name=AL42_RS20870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20870;old_locus_tag=AL42_03149 NZ_KK316784.1 Protein Homology CDS 3376735 3377418 . - 0 ID=cds-WP_003415939.1;Parent=gene-AL42_RS20870;Dbxref=GenBank:WP_003415939.1;Name=WP_003415939.1;Ontology_term=GO:0006629,GO:0008126;gbkey=CDS;go_function=acetylesterase activity|0008126||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217552.1;locus_tag=AL42_RS20870;product=esterase;protein_id=WP_003415939.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3377491 3378705 . - . ID=gene-AL42_RS20875;Name=AL42_RS20875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20875;old_locus_tag=AL42_03150 NZ_KK316784.1 Protein Homology CDS 3377491 3378705 . - 0 ID=cds-WP_014585367.1;Parent=gene-AL42_RS20875;Dbxref=GenBank:WP_014585367.1;Name=WP_014585367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008259139.1;locus_tag=AL42_RS20875;product=class I SAM-dependent methyltransferase;protein_id=WP_014585367.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3378702 3379685 . - . ID=gene-AL42_RS20880;Name=AL42_RS20880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20880;old_locus_tag=AL42_03151 NZ_KK316784.1 Protein Homology CDS 3378702 3379685 . - 0 ID=cds-WP_003415941.1;Parent=gene-AL42_RS20880;Dbxref=GenBank:WP_003415941.1;Name=WP_003415941.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217554.1;locus_tag=AL42_RS20880;product=class I SAM-dependent methyltransferase;protein_id=WP_003415941.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3379696 3380460 . - . ID=gene-AL42_RS20885;Name=AL42_RS20885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20885;old_locus_tag=AL42_03152 NZ_KK316784.1 Protein Homology CDS 3379696 3380460 . - 0 ID=cds-WP_003415942.1;Parent=gene-AL42_RS20885;Dbxref=GenBank:WP_003415942.1;Name=WP_003415942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217555.1;locus_tag=AL42_RS20885;product=enoyl-CoA hydratase;protein_id=WP_003415942.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3380469 3381335 . - . ID=gene-AL42_RS20890;Name=AL42_RS20890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20890;old_locus_tag=AL42_03153 NZ_KK316784.1 Protein Homology CDS 3380469 3381335 . - 0 ID=cds-WP_003415943.1;Parent=gene-AL42_RS20890;Dbxref=GenBank:WP_003415943.1;Name=WP_003415943.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217556.1;locus_tag=AL42_RS20890;product=NUDIX hydrolase;protein_id=WP_003415943.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3381332 3382195 . - . ID=gene-AL42_RS20895;Name=AL42_RS20895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20895;old_locus_tag=AL42_03154 NZ_KK316784.1 Protein Homology CDS 3381332 3382195 . - 0 ID=cds-WP_003415944.1;Parent=gene-AL42_RS20895;Dbxref=GenBank:WP_003415944.1;Name=WP_003415944.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217557.1;locus_tag=AL42_RS20895;product=ABC transporter ATP-binding protein;protein_id=WP_003415944.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3382210 3383439 . - . ID=gene-AL42_RS20900;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=AL42_RS20900;old_locus_tag=AL42_03155 NZ_KK316784.1 Protein Homology CDS 3382210 3383439 . - 0 ID=cds-WP_003415945.1;Parent=gene-AL42_RS20900;Dbxref=GenBank:WP_003415945.1;Name=WP_003415945.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217558.1;locus_tag=AL42_RS20900;product=phosphoserine phosphatase SerB;protein_id=WP_003415945.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3383477 3385198 . - . ID=gene-AL42_RS20905;Name=ctaD;gbkey=Gene;gene=ctaD;gene_biotype=protein_coding;locus_tag=AL42_RS20905;old_locus_tag=AL42_03156 NZ_KK316784.1 Protein Homology CDS 3383477 3385198 . - 0 ID=cds-WP_003415946.1;Parent=gene-AL42_RS20905;Dbxref=GenBank:WP_003415946.1;Name=WP_003415946.1;gbkey=CDS;gene=ctaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217559.1;locus_tag=AL42_RS20905;product=aa3-type cytochrome oxidase subunit I;protein_id=WP_003415946.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3385413 3386492 . + . ID=gene-AL42_RS20910;Name=fecB;gbkey=Gene;gene=fecB;gene_biotype=protein_coding;locus_tag=AL42_RS20910;old_locus_tag=AL42_03157 NZ_KK316784.1 Protein Homology CDS 3385413 3386492 . + 0 ID=cds-WP_003415959.1;Parent=gene-AL42_RS20910;Dbxref=GenBank:WP_003415959.1;Name=WP_003415959.1;Ontology_term=GO:0015891,GO:0005524,GO:0042626,GO:0140359;gbkey=CDS;gene=fecB;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217560.1;locus_tag=AL42_RS20910;product=iron-siderophore ABC transporter substrate-binding protein;protein_id=WP_003415959.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3386562 3387602 . + . ID=gene-AL42_RS20915;Name=adhC;gbkey=Gene;gene=adhC;gene_biotype=protein_coding;locus_tag=AL42_RS20915;old_locus_tag=AL42_03158 NZ_KK316784.1 Protein Homology CDS 3386562 3387602 . + 0 ID=cds-WP_003415965.1;Parent=gene-AL42_RS20915;Dbxref=GenBank:WP_003415965.1;Name=WP_003415965.1;Ontology_term=GO:0016491;gbkey=CDS;gene=adhC;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217561.1;locus_tag=AL42_RS20915;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_003415965.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3387591 3387965 . - . ID=gene-AL42_RS20920;Name=AL42_RS20920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20920;old_locus_tag=AL42_03159 NZ_KK316784.1 Protein Homology CDS 3387591 3387965 . - 0 ID=cds-WP_003415968.1;Parent=gene-AL42_RS20920;Dbxref=GenBank:WP_003415968.1;Name=WP_003415968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217562.1;locus_tag=AL42_RS20920;product=DUF3349 domain-containing protein;protein_id=WP_003415968.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3388299 3388583 . - . ID=gene-AL42_RS20925;Name=AL42_RS20925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20925;old_locus_tag=AL42_03160 NZ_KK316784.1 Protein Homology CDS 3388299 3388583 . - 0 ID=cds-WP_003902400.1;Parent=gene-AL42_RS20925;Dbxref=GenBank:WP_003902400.1;Name=WP_003902400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217563.1;locus_tag=AL42_RS20925;product=hypothetical protein;protein_id=WP_003902400.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3388681 3389655 . - . ID=gene-AL42_RS20930;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=AL42_RS20930;old_locus_tag=AL42_03161 NZ_KK316784.1 Protein Homology CDS 3388681 3389655 . - 0 ID=cds-WP_003415973.1;Parent=gene-AL42_RS20930;Dbxref=GenBank:WP_003415973.1;Name=WP_003415973.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177921.1;locus_tag=AL42_RS20930;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_003415973.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3389786 3391360 . - . ID=gene-AL42_RS20935;Name=AL42_RS20935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20935;old_locus_tag=AL42_03162 NZ_KK316784.1 Protein Homology CDS 3389786 3391360 . - 0 ID=cds-WP_003899895.1;Parent=gene-AL42_RS20935;Dbxref=GenBank:WP_003899895.1;Name=WP_003899895.1;Ontology_term=GO:0004497,GO:0016709,GO:0050660;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217565.1;locus_tag=AL42_RS20935;product=flavin-containing monooxygenase;protein_id=WP_003899895.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3391494 3392234 . - . ID=gene-AL42_RS20940;Name=AL42_RS20940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20940;old_locus_tag=AL42_03163 NZ_KK316784.1 Protein Homology CDS 3391494 3392234 . - 0 ID=cds-WP_003415979.1;Parent=gene-AL42_RS20940;Dbxref=GenBank:WP_003415979.1;Name=WP_003415979.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217566.1;locus_tag=AL42_RS20940;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003415979.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3392362 3394539 . - . ID=gene-AL42_RS20945;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=AL42_RS20945;old_locus_tag=AL42_03164 NZ_KK316784.1 Protein Homology CDS 3392362 3394539 . - 0 ID=cds-WP_019249836.1;Parent=gene-AL42_RS20945;Dbxref=GenBank:WP_019249836.1;Name=WP_019249836.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016719502.1;locus_tag=AL42_RS20945;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_019249836.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3394509 3394961 . - . ID=gene-AL42_RS20950;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=AL42_RS20950;old_locus_tag=AL42_03165 NZ_KK316784.1 Protein Homology CDS 3394509 3394961 . - 0 ID=cds-WP_003415981.1;Parent=gene-AL42_RS20950;Dbxref=GenBank:WP_003415981.1;Name=WP_003415981.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217568.1;locus_tag=AL42_RS20950;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_003415981.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3394996 3395235 . - . ID=gene-AL42_RS20955;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=AL42_RS20955;old_locus_tag=AL42_03166 NZ_KK316784.1 Protein Homology CDS 3394996 3395235 . - 0 ID=cds-WP_003415982.1;Parent=gene-AL42_RS20955;Dbxref=GenBank:WP_003415982.1;Name=WP_003415982.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217569.1;locus_tag=AL42_RS20955;product=redoxin NrdH;protein_id=WP_003415982.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3395698 3396252 . - . ID=gene-AL42_RS20960;Name=AL42_RS20960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20960;old_locus_tag=AL42_03167 NZ_KK316784.1 Protein Homology CDS 3395698 3396252 . - 0 ID=cds-WP_003415983.1;Parent=gene-AL42_RS20960;Dbxref=GenBank:WP_003415983.1;Name=WP_003415983.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217570.1;locus_tag=AL42_RS20960;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_003415983.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3396344 3396958 . + . ID=gene-AL42_RS20965;Name=AL42_RS20965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20965;old_locus_tag=AL42_03168 NZ_KK316784.1 Protein Homology CDS 3396344 3396958 . + 0 ID=cds-WP_003415984.1;Parent=gene-AL42_RS20965;Dbxref=GenBank:WP_003415984.1;Name=WP_003415984.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217571.1;locus_tag=AL42_RS20965;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003415984.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3396968 3398008 . + . ID=gene-AL42_RS20970;Name=dinP;gbkey=Gene;gene=dinP;gene_biotype=protein_coding;locus_tag=AL42_RS20970;old_locus_tag=AL42_03169 NZ_KK316784.1 Protein Homology CDS 3396968 3398008 . + 0 ID=cds-WP_003899898.1;Parent=gene-AL42_RS20970;Dbxref=GenBank:WP_003899898.1;Name=WP_003899898.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinP;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217572.1;locus_tag=AL42_RS20970;product=DNA polymerase IV;protein_id=WP_003899898.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3398062 3398925 . - . ID=gene-AL42_RS20975;Name=AL42_RS20975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20975;old_locus_tag=AL42_03170 NZ_KK316784.1 Protein Homology CDS 3398062 3398925 . - 0 ID=cds-WP_003415986.1;Parent=gene-AL42_RS20975;Dbxref=GenBank:WP_003415986.1;Name=WP_003415986.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217573.1;locus_tag=AL42_RS20975;product=SDR family oxidoreductase;protein_id=WP_003415986.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3398989 3399639 . - . ID=gene-AL42_RS20980;Name=AL42_RS20980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20980;old_locus_tag=AL42_03171 NZ_KK316784.1 Protein Homology CDS 3398989 3399639 . - 0 ID=cds-WP_003415987.1;Parent=gene-AL42_RS20980;Dbxref=GenBank:WP_003415987.1;Name=WP_003415987.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217574.1;locus_tag=AL42_RS20980;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003415987.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3399755 3401233 . + . ID=gene-AL42_RS20985;Name=AL42_RS20985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20985;old_locus_tag=AL42_03172 NZ_KK316784.1 Protein Homology CDS 3399755 3401233 . + 0 ID=cds-WP_003415988.1;Parent=gene-AL42_RS20985;Dbxref=GenBank:WP_003415988.1;Name=WP_003415988.1;Ontology_term=GO:0004497,GO:0005506,GO:0016705,GO:0020037;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217575.1;locus_tag=AL42_RS20985;product=cytochrome P450;protein_id=WP_003415988.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3402004 3403476 . - . ID=gene-AL42_RS20990;Name=AL42_RS20990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20990;old_locus_tag=AL42_03173 NZ_KK316784.1 Protein Homology CDS 3402004 3403476 . - 0 ID=cds-WP_003415989.1;Parent=gene-AL42_RS20990;Dbxref=GenBank:WP_003415989.1;Name=WP_003415989.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217576.1;locus_tag=AL42_RS20990;product=FadR/GntR family transcriptional regulator;protein_id=WP_003415989.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3403593 3405758 . - . ID=gene-AL42_RS20995;Name=AL42_RS20995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS20995;old_locus_tag=AL42_03174 NZ_KK316784.1 Protein Homology CDS 3403593 3405758 . - 0 ID=cds-WP_003902404.1;Parent=gene-AL42_RS20995;Dbxref=GenBank:WP_003902404.1;Name=WP_003902404.1;Ontology_term=GO:0006631,GO:0016627,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217577.1;locus_tag=AL42_RS20995;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003902404.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3405915 3407438 . + . ID=gene-AL42_RS21000;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;locus_tag=AL42_RS21000;old_locus_tag=AL42_03175 NZ_KK316784.1 Protein Homology CDS 3405915 3407438 . + 0 ID=cds-WP_003415991.1;Parent=gene-AL42_RS21000;Dbxref=GenBank:WP_003415991.1;Name=WP_003415991.1;Ontology_term=GO:0006281,GO:0006310,GO:0071897,GO:0003677,GO:0003910,GO:0005524;gbkey=CDS;gene=ligB;go_function=DNA binding|0003677||IEA,DNA ligase (ATP) activity|0003910||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA,DNA biosynthetic process|0071897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217578.1;locus_tag=AL42_RS21000;product=ATP-dependent DNA ligase;protein_id=WP_003415991.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3407574 3409850 . + . ID=gene-AL42_RS21005;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=AL42_RS21005;old_locus_tag=AL42_03176 NZ_KK316784.1 Protein Homology CDS 3407574 3409850 . + 0 ID=cds-WP_003415992.1;Parent=gene-AL42_RS21005;Dbxref=GenBank:WP_003415992.1;Name=WP_003415992.1;Ontology_term=GO:0009267,GO:0016020;gbkey=CDS;gene=cstA;go_component=membrane|0016020||IEA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217579.1;locus_tag=AL42_RS21005;product=carbon starvation CstA family protein;protein_id=WP_003415992.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3410156 3410581 . - . ID=gene-AL42_RS21010;Name=AL42_RS21010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21010;old_locus_tag=AL42_03177 NZ_KK316784.1 Protein Homology CDS 3410156 3410581 . - 0 ID=cds-WP_003415994.1;Parent=gene-AL42_RS21010;Dbxref=GenBank:WP_003415994.1;Name=WP_003415994.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217580.1;locus_tag=AL42_RS21010;product=DoxX family protein;protein_id=WP_003415994.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3410718 3411041 . + . ID=gene-AL42_RS21015;Name=mmr;gbkey=Gene;gene=mmr;gene_biotype=protein_coding;locus_tag=AL42_RS21015;old_locus_tag=AL42_03178 NZ_KK316784.1 Protein Homology CDS 3410718 3411041 . + 0 ID=cds-WP_003415995.1;Parent=gene-AL42_RS21015;Dbxref=GenBank:WP_003415995.1;Name=WP_003415995.1;gbkey=CDS;gene=mmr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177922.1;locus_tag=AL42_RS21015;product=multidrug efflux SMR transporter Mmr;protein_id=WP_003415995.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3411038 3411646 . + . ID=gene-AL42_RS21020;Name=AL42_RS21020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21020;old_locus_tag=AL42_03179 NZ_KK316784.1 Protein Homology CDS 3411038 3411646 . + 0 ID=cds-WP_003416005.1;Parent=gene-AL42_RS21020;Dbxref=GenBank:WP_003416005.1;Name=WP_003416005.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217582.1;locus_tag=AL42_RS21020;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003416005.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3411624 3412169 . + . ID=gene-AL42_RS21025;Name=AL42_RS21025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21025;old_locus_tag=AL42_03180 NZ_KK316784.1 Protein Homology CDS 3411624 3412169 . + 0 ID=cds-WP_003917120.1;Parent=gene-AL42_RS21025;Dbxref=GenBank:WP_003917120.1;Name=WP_003917120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015385303.1;locus_tag=AL42_RS21025;product=DUF732 domain-containing protein;protein_id=WP_003917120.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3412171 3412243 . - . ID=gene-AL42_RS21030;Name=AL42_RS21030;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL42_RS21030;old_locus_tag=AL42_03181 NZ_KK316784.1 tRNAscan-SE tRNA 3412171 3412243 . - . ID=rna-AL42_RS21030;Parent=gene-AL42_RS21030;anticodon=(pos:complement(3412208..3412210));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS21030;product=tRNA-Ala NZ_KK316784.1 tRNAscan-SE exon 3412171 3412243 . - . ID=exon-AL42_RS21030-1;Parent=rna-AL42_RS21030;anticodon=(pos:complement(3412208..3412210));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS21030;product=tRNA-Ala NZ_KK316784.1 RefSeq gene 3412310 3413953 . - . ID=gene-AL42_RS21035;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=AL42_RS21035;old_locus_tag=AL42_03182 NZ_KK316784.1 Protein Homology CDS 3412310 3413953 . - 0 ID=cds-WP_003899902.1;Parent=gene-AL42_RS21035;Dbxref=GenBank:WP_003899902.1;Name=WP_003899902.1;Ontology_term=GO:0005975,GO:0004614;gbkey=CDS;gene=pgm;go_function=phosphoglucomutase activity|0004614||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217584.1;locus_tag=AL42_RS21035;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);protein_id=WP_003899902.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3414023 3414421 . + . ID=gene-AL42_RS21040;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=AL42_RS21040;old_locus_tag=AL42_03183 NZ_KK316784.1 Protein Homology CDS 3414023 3414421 . + 0 ID=cds-WP_003416045.1;Parent=gene-AL42_RS21040;Dbxref=GenBank:WP_003416045.1;Name=WP_003416045.1;gbkey=CDS;gene=crcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217585.1;locus_tag=AL42_RS21040;product=fluoride efflux transporter CrcB;protein_id=WP_003416045.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3414418 3414798 . + . ID=gene-AL42_RS21045;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=AL42_RS21045;old_locus_tag=AL42_03184 NZ_KK316784.1 Protein Homology CDS 3414418 3414798 . + 0 ID=cds-WP_003416046.1;Parent=gene-AL42_RS21045;Dbxref=GenBank:WP_003416046.1;Name=WP_003416046.1;gbkey=CDS;gene=crcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217586.1;locus_tag=AL42_RS21045;product=fluoride efflux transporter CrcB;protein_id=WP_003416046.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3414795 3415904 . + . ID=gene-AL42_RS21050;Name=AL42_RS21050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21050;old_locus_tag=AL42_03185 NZ_KK316784.1 Protein Homology CDS 3414795 3415904 . + 0 ID=cds-WP_003901532.1;Parent=gene-AL42_RS21050;Dbxref=GenBank:WP_003901532.1;Name=WP_003901532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217587.1;locus_tag=AL42_RS21050;product=DUF190 domain-containing protein;protein_id=WP_003901532.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 3416049 3416644 . - . ID=gene-AL42_RS28030;Name=AL42_RS28030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS28030;old_locus_tag=AL42_03186;pseudo=true NZ_KK316784.1 Protein Homology CDS 3416049 3416644 . - 0 ID=cds-AL42_RS28030;Parent=gene-AL42_RS28030;Note=frameshifted;Ontology_term=GO:0016705;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: protein motif:HMM:NF012517.6;locus_tag=AL42_RS28030;product=LLM class flavin-dependent oxidoreductase;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 3416660 3417016 . - . ID=gene-AL42_RS21060;Name=AL42_RS21060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21060;old_locus_tag=AL42_03187 NZ_KK316784.1 Protein Homology CDS 3416660 3417016 . - 0 ID=cds-WP_003416050.1;Parent=gene-AL42_RS21060;Dbxref=GenBank:WP_003416050.1;Name=WP_003416050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217589.1;locus_tag=AL42_RS21060;product=DUF488 domain-containing protein;protein_id=WP_003416050.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3417110 3418384 . + . ID=gene-AL42_RS21065;Name=AL42_RS21065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21065;old_locus_tag=AL42_03188 NZ_KK316784.1 Protein Homology CDS 3417110 3418384 . + 0 ID=cds-WP_003416051.1;Parent=gene-AL42_RS21065;Dbxref=GenBank:WP_003416051.1;Name=WP_003416051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217590.1;locus_tag=AL42_RS21065;product=HNH endonuclease;protein_id=WP_003416051.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3418381 3419304 . - . ID=gene-AL42_RS21070;Name=AL42_RS21070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21070;old_locus_tag=AL42_03189 NZ_KK316784.1 Protein Homology CDS 3418381 3419304 . - 0 ID=cds-WP_003416052.1;Parent=gene-AL42_RS21070;Dbxref=GenBank:WP_003416052.1;Name=WP_003416052.1;Ontology_term=GO:0016829,GO:0046872;gbkey=CDS;go_function=lyase activity|0016829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217591.1;locus_tag=AL42_RS21070;product=HpcH/HpaI aldolase/citrate lyase family protein;protein_id=WP_003416052.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3419403 3419879 . + . ID=gene-AL42_RS21075;Name=AL42_RS21075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21075;old_locus_tag=AL42_03190 NZ_KK316784.1 Protein Homology CDS 3419403 3419879 . + 0 ID=cds-WP_003416053.1;Parent=gene-AL42_RS21075;Dbxref=GenBank:WP_003416053.1;Name=WP_003416053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217592.1;locus_tag=AL42_RS21075;product=SRPBCC family protein;protein_id=WP_003416053.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3419872 3421683 . + . ID=gene-AL42_RS21080;Name=AL42_RS21080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21080;old_locus_tag=AL42_03191 NZ_KK316784.1 Protein Homology CDS 3419872 3421683 . + 0 ID=cds-WP_003901535.1;Parent=gene-AL42_RS21080;Dbxref=GenBank:WP_003901535.1;Name=WP_003901535.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177923.1;locus_tag=AL42_RS21080;product=sulfatase-like hydrolase/transferase;protein_id=WP_003901535.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3421684 3422085 . + . ID=gene-AL42_RS21085;Name=hab;gbkey=Gene;gene=hab;gene_biotype=protein_coding;locus_tag=AL42_RS21085;old_locus_tag=AL42_03192 NZ_KK316784.1 Protein Homology CDS 3421684 3422085 . + 0 ID=cds-WP_003416059.1;Parent=gene-AL42_RS21085;Dbxref=GenBank:WP_003416059.1;Name=WP_003416059.1;gbkey=CDS;gene=hab;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217594.1;locus_tag=AL42_RS21085;product=styrene oxide isomerase;protein_id=WP_003416059.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3422101 3422928 . - . ID=gene-AL42_RS21090;Name=AL42_RS21090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21090;old_locus_tag=AL42_03193 NZ_KK316784.1 Protein Homology CDS 3422101 3422928 . - 0 ID=cds-WP_003416061.1;Parent=gene-AL42_RS21090;Dbxref=GenBank:WP_003416061.1;Name=WP_003416061.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217595.1;locus_tag=AL42_RS21090;product=LLM class F420-dependent oxidoreductase;protein_id=WP_003416061.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3422987 3426319 . - . ID=gene-AL42_RS21095;Name=pknK;gbkey=Gene;gene=pknK;gene_biotype=protein_coding;locus_tag=AL42_RS21095;old_locus_tag=AL42_03194 NZ_KK316784.1 Protein Homology CDS 3422987 3426319 . - 0 ID=cds-WP_003899905.1;Parent=gene-AL42_RS21095;Dbxref=GenBank:WP_003899905.1;Name=WP_003899905.1;gbkey=CDS;gene=pknK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217596.1;locus_tag=AL42_RS21095;product=serine/threonine protein kinase PknK;protein_id=WP_003899905.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3426371 3427609 . + . ID=gene-AL42_RS21100;Name=AL42_RS21100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21100;old_locus_tag=AL42_03195 NZ_KK316784.1 Protein Homology CDS 3426371 3427609 . + 0 ID=cds-WP_003902406.1;Parent=gene-AL42_RS21100;Dbxref=GenBank:WP_003902406.1;Name=WP_003902406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217597.1;locus_tag=AL42_RS21100;product=nucleotidyltransferase;protein_id=WP_003902406.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3427735 3428757 . - . ID=gene-AL42_RS21105;Name=virS;gbkey=Gene;gene=virS;gene_biotype=protein_coding;locus_tag=AL42_RS21105;old_locus_tag=AL42_03196 NZ_KK316784.1 Protein Homology CDS 3427735 3428757 . - 0 ID=cds-WP_003416068.1;Parent=gene-AL42_RS21105;Dbxref=GenBank:WP_003416068.1;Name=WP_003416068.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=virS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217598.1;locus_tag=AL42_RS21105;product=AraC family transcriptional regulator;protein_id=WP_003416068.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3428835 3430322 . + . ID=gene-AL42_RS21110;Name=AL42_RS21110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21110;old_locus_tag=AL42_03197 NZ_KK316784.1 Protein Homology CDS 3428835 3430322 . + 0 ID=cds-WP_003899906.1;Parent=gene-AL42_RS21110;Dbxref=GenBank:WP_003899906.1;Name=WP_003899906.1;Ontology_term=GO:0004497,GO:0016709,GO:0050660;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217599.1;locus_tag=AL42_RS21110;product=flavin-containing monooxygenase;protein_id=WP_003899906.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3430328 3431254 . + . ID=gene-AL42_RS21115;Name=lipR;gbkey=Gene;gene=lipR;gene_biotype=protein_coding;locus_tag=AL42_RS21115;old_locus_tag=AL42_03198 NZ_KK316784.1 Protein Homology CDS 3430328 3431254 . + 0 ID=cds-WP_003901538.1;Parent=gene-AL42_RS21115;Dbxref=GenBank:WP_003901538.1;Name=WP_003901538.1;Ontology_term=GO:0016787;gbkey=CDS;gene=lipR;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217600.1;locus_tag=AL42_RS21115;product=alpha/beta hydrolase;protein_id=WP_003901538.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3431251 3432081 . + . ID=gene-AL42_RS21120;Name=AL42_RS21120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21120;old_locus_tag=AL42_03199 NZ_KK316784.1 Protein Homology CDS 3431251 3432081 . + 0 ID=cds-WP_003416074.1;Parent=gene-AL42_RS21120;Dbxref=GenBank:WP_003416074.1;Name=WP_003416074.1;Ontology_term=GO:0016491,GO:0070401,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP+ binding|0070401||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217601.1;locus_tag=AL42_RS21120;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_003416074.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3432112 3433218 . + . ID=gene-AL42_RS21125;Name=adhD;gbkey=Gene;gene=adhD;gene_biotype=protein_coding;locus_tag=AL42_RS21125;old_locus_tag=AL42_03200 NZ_KK316784.1 Protein Homology CDS 3432112 3433218 . + 0 ID=cds-WP_003416075.1;Parent=gene-AL42_RS21125;Dbxref=GenBank:WP_003416075.1;Name=WP_003416075.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;gene=adhD;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217602.1;locus_tag=AL42_RS21125;product=NDMA-dependent alcohol dehydrogenase;protein_id=WP_003416075.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3433256 3434674 . + . ID=gene-AL42_RS21130;Name=AL42_RS21130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21130;old_locus_tag=AL42_03201 NZ_KK316784.1 Protein Homology CDS 3433256 3434674 . + 0 ID=cds-WP_031721921.1;Parent=gene-AL42_RS21130;Dbxref=GenBank:WP_031721921.1;Name=WP_031721921.1;Ontology_term=GO:0045017,GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;go_process=glycerolipid biosynthetic process|0045017||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217603.1;locus_tag=AL42_RS21130;product=WS/DGAT/MGAT family O-acyltransferase;protein_id=WP_031721921.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3434671 3436095 . + . ID=gene-AL42_RS21135;Name=AL42_RS21135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21135;old_locus_tag=AL42_03202 NZ_KK316784.1 Protein Homology CDS 3434671 3436095 . + 0 ID=cds-WP_003416079.1;Parent=gene-AL42_RS21135;Dbxref=GenBank:WP_003416079.1;Name=WP_003416079.1;Ontology_term=GO:0045017,GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;go_process=glycerolipid biosynthetic process|0045017||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217604.1;locus_tag=AL42_RS21135;product=WS/DGAT/MGAT family O-acyltransferase;protein_id=WP_003416079.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3436092 3437603 . + . ID=gene-AL42_RS21140;Name=fadD13;gbkey=Gene;gene=fadD13;gene_biotype=protein_coding;locus_tag=AL42_RS21140;old_locus_tag=AL42_03203 NZ_KK316784.1 Protein Homology CDS 3436092 3437603 . + 0 ID=cds-WP_003416081.1;Parent=gene-AL42_RS21140;Dbxref=GenBank:WP_003416081.1;Name=WP_003416081.1;gbkey=CDS;gene=fadD13;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217605.1;locus_tag=AL42_RS21140;product=long-chain-fatty-acid--CoA ligase FadD13;protein_id=WP_003416081.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3438542 3439429 . + . ID=gene-AL42_RS21145;Name=AL42_RS21145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21145;old_locus_tag=AL42_03204 NZ_KK316784.1 Protein Homology CDS 3438542 3439429 . + 0 ID=cds-WP_003416086.1;Parent=gene-AL42_RS21145;Dbxref=GenBank:WP_003416086.1;Name=WP_003416086.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217606.1;locus_tag=AL42_RS21145;product=Rv3090 family protease;protein_id=WP_003416086.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3439447 3441138 . + . ID=gene-AL42_RS21150;Name=AL42_RS21150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21150;old_locus_tag=AL42_03205 NZ_KK316784.1 Protein Homology CDS 3439447 3441138 . + 0 ID=cds-WP_003900628.1;Parent=gene-AL42_RS21150;Dbxref=GenBank:WP_003900628.1;Name=WP_003900628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217607.1;locus_tag=AL42_RS21150;product=patatin-like phospholipase family protein;protein_id=WP_003900628.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3441145 3442065 . - . ID=gene-AL42_RS21155;Name=AL42_RS21155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21155;old_locus_tag=AL42_03206 NZ_KK316784.1 Protein Homology CDS 3441145 3442065 . - 0 ID=cds-WP_003416091.1;Parent=gene-AL42_RS21155;Dbxref=GenBank:WP_003416091.1;Name=WP_003416091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217608.1;locus_tag=AL42_RS21155;product=DUF808 domain-containing protein;protein_id=WP_003416091.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3442091 3443095 . - . ID=gene-AL42_RS21160;Name=AL42_RS21160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21160;old_locus_tag=AL42_03207 NZ_KK316784.1 Protein Homology CDS 3442091 3443095 . - 0 ID=cds-WP_003416094.1;Parent=gene-AL42_RS21160;Dbxref=GenBank:WP_003416094.1;Name=WP_003416094.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217609.1;locus_tag=AL42_RS21160;product=LLM class F420-dependent oxidoreductase;protein_id=WP_003416094.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3443092 3444222 . - . ID=gene-AL42_RS21165;Name=AL42_RS21165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21165;old_locus_tag=AL42_03208 NZ_KK316784.1 Protein Homology CDS 3443092 3444222 . - 0 ID=cds-WP_003416097.1;Parent=gene-AL42_RS21165;Dbxref=GenBank:WP_003416097.1;Name=WP_003416097.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217610.1;locus_tag=AL42_RS21165;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003416097.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3444304 3444780 . + . ID=gene-AL42_RS21170;Name=AL42_RS21170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21170;old_locus_tag=AL42_03209 NZ_KK316784.1 Protein Homology CDS 3444304 3444780 . + 0 ID=cds-WP_003416099.1;Parent=gene-AL42_RS21170;Dbxref=GenBank:WP_003416099.1;Name=WP_003416099.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217611.1;locus_tag=AL42_RS21170;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_003416099.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3444878 3446017 . + . ID=gene-AL42_RS21175;Name=AL42_RS21175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21175;old_locus_tag=AL42_03210 NZ_KK316784.1 Protein Homology CDS 3444878 3446017 . + 0 ID=cds-WP_003899909.1;Parent=gene-AL42_RS21175;Dbxref=GenBank:WP_003899909.1;Name=WP_003899909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217612.1;locus_tag=AL42_RS21175;product=glycoside hydrolase 5 family protein;protein_id=WP_003899909.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3446109 3447422 . - . ID=gene-AL42_RS21180;Name=lipY;gbkey=Gene;gene=lipY;gene_biotype=protein_coding;locus_tag=AL42_RS21180;old_locus_tag=AL42_03211 NZ_KK316784.1 Protein Homology CDS 3446109 3447422 . - 0 ID=cds-WP_003901542.1;Parent=gene-AL42_RS21180;Dbxref=GenBank:WP_003901542.1;Name=WP_003901542.1;gbkey=CDS;gene=lipY;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177924.1;locus_tag=AL42_RS21180;product=triacylglycerol lipase LipY;protein_id=WP_003901542.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3447541 3447993 . - . ID=gene-AL42_RS26370;Name=AL42_RS26370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS26370;old_locus_tag=AL42_03212 NZ_KK316784.1 Protein Homology CDS 3447541 3447993 . - 0 ID=cds-WP_003899911.1;Parent=gene-AL42_RS26370;Dbxref=GenBank:WP_003899911.1;Name=WP_003899911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217614.1;locus_tag=AL42_RS26370;product=hypothetical protein;protein_id=WP_003899911.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3447937 3448257 . + . ID=gene-AL42_RS21190;Name=pemK;gbkey=Gene;gene=pemK;gene_biotype=protein_coding;locus_tag=AL42_RS21190;old_locus_tag=AL42_03214 NZ_KK316784.1 Protein Homology CDS 3447937 3448257 . + 0 ID=cds-WP_003416110.1;Parent=gene-AL42_RS21190;Dbxref=GenBank:WP_003416110.1;Name=WP_003416110.1;gbkey=CDS;gene=pemK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007411812.1;locus_tag=AL42_RS21190;product=type II toxin-antitoxin system toxin endoribonuclease PemK;protein_id=WP_003416110.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3448298 3448665 . - . ID=gene-AL42_RS26375;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=AL42_RS26375 NZ_KK316784.1 cmsearch tmRNA 3448298 3448665 . - . ID=rna-AL42_RS26375;Parent=gene-AL42_RS26375;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AL42_RS26375;product=transfer-messenger RNA NZ_KK316784.1 cmsearch exon 3448298 3448665 . - . ID=exon-AL42_RS26375-1;Parent=rna-AL42_RS26375;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AL42_RS26375;product=transfer-messenger RNA NZ_KK316784.1 RefSeq gene 3448744 3449595 . - . ID=gene-AL42_RS21195;Name=AL42_RS21195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21195;old_locus_tag=AL42_03215 NZ_KK316784.1 Protein Homology CDS 3448744 3449595 . - 0 ID=cds-WP_003416111.1;Parent=gene-AL42_RS21195;Dbxref=GenBank:WP_003416111.1;Name=WP_003416111.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217615.1;locus_tag=AL42_RS21195;product=maleylpyruvate isomerase family mycothiol-dependent enzyme;protein_id=WP_003416111.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3449632 3450114 . - . ID=gene-AL42_RS21200;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=AL42_RS21200;old_locus_tag=AL42_03216 NZ_KK316784.1 Protein Homology CDS 3449632 3450114 . - 0 ID=cds-WP_003416113.1;Parent=gene-AL42_RS21200;Dbxref=GenBank:WP_003416113.1;Name=WP_003416113.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217616.1;locus_tag=AL42_RS21200;product=SsrA-binding protein SmpB;protein_id=WP_003416113.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3450117 3451010 . - . ID=gene-AL42_RS21205;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=AL42_RS21205;old_locus_tag=AL42_03217 NZ_KK316784.1 Protein Homology CDS 3450117 3451010 . - 0 ID=cds-WP_003416117.1;Parent=gene-AL42_RS21205;Dbxref=GenBank:WP_003416117.1;Name=WP_003416117.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ftsX;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217617.1;locus_tag=AL42_RS21205;product=permease-like cell division protein FtsX;protein_id=WP_003416117.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3451011 3451700 . - . ID=gene-AL42_RS21210;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=AL42_RS21210;old_locus_tag=AL42_03218 NZ_KK316784.1 Protein Homology CDS 3451011 3451700 . - 0 ID=cds-WP_003416120.1;Parent=gene-AL42_RS21210;Dbxref=GenBank:WP_003416120.1;Name=WP_003416120.1;Ontology_term=GO:0000910,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217618.1;locus_tag=AL42_RS21210;product=cell division ATP-binding protein FtsE;protein_id=WP_003416120.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3451744 3452181 . - . ID=gene-AL42_RS21215;Name=AL42_RS21215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21215;old_locus_tag=AL42_03219 NZ_KK316784.1 Protein Homology CDS 3451744 3452181 . - 0 ID=cds-WP_003416124.1;Parent=gene-AL42_RS21215;Dbxref=GenBank:WP_003416124.1;Name=WP_003416124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217619.1;locus_tag=AL42_RS21215;product=Rv3103c family proline-rich protein;protein_id=WP_003416124.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3452183 3453109 . - . ID=gene-AL42_RS21220;Name=AL42_RS21220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21220;old_locus_tag=AL42_03220 NZ_KK316784.1 Protein Homology CDS 3452183 3453109 . - 0 ID=cds-WP_003416127.1;Parent=gene-AL42_RS21220;Dbxref=GenBank:WP_003416127.1;Name=WP_003416127.1;Ontology_term=GO:0008381;gbkey=CDS;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217620.1;locus_tag=AL42_RS21220;product=mechanosensitive ion channel family protein;protein_id=WP_003416127.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3453099 3454214 . - . ID=gene-AL42_RS21225;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=AL42_RS21225;old_locus_tag=AL42_03221 NZ_KK316784.1 Protein Homology CDS 3453099 3454214 . - 0 ID=cds-WP_003416129.1;Parent=gene-AL42_RS21225;Dbxref=GenBank:WP_003416129.1;Name=WP_003416129.1;Ontology_term=GO:0006415,GO:0016149,GO:0005737;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011725809.1;locus_tag=AL42_RS21225;product=peptide chain release factor 2;protein_id=WP_003416129.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3454339 3455709 . + . ID=gene-AL42_RS21230;Name=fprA;gbkey=Gene;gene=fprA;gene_biotype=protein_coding;locus_tag=AL42_RS21230;old_locus_tag=AL42_03222 NZ_KK316784.1 Protein Homology CDS 3454339 3455709 . + 0 ID=cds-WP_003900632.1;Parent=gene-AL42_RS21230;Dbxref=GenBank:WP_003900632.1;Name=WP_003900632.1;gbkey=CDS;gene=fprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217622.1;locus_tag=AL42_RS21230;product=ferredoxin--NADP(+) reductase FprA;protein_id=WP_003900632.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3455710 3457293 . - . ID=gene-AL42_RS21235;Name=agpS;gbkey=Gene;gene=agpS;gene_biotype=protein_coding;locus_tag=AL42_RS21235;old_locus_tag=AL42_03223 NZ_KK316784.1 Protein Homology CDS 3455710 3457293 . - 0 ID=cds-WP_003899914.1;Parent=gene-AL42_RS21235;Dbxref=GenBank:WP_003899914.1;Name=WP_003899914.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;gene=agpS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217623.1;locus_tag=AL42_RS21235;product=FAD-binding oxidoreductase;protein_id=WP_003899914.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3457304 3457507 . - . ID=gene-AL42_RS27285;Name=AL42_RS27285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27285 NZ_KK316784.1 Protein Homology CDS 3457304 3457507 . - 0 ID=cds-WP_003913800.1;Parent=gene-AL42_RS27285;Dbxref=GenBank:WP_003913800.1;Name=WP_003913800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003913800.1;locus_tag=AL42_RS27285;product=hypothetical protein;protein_id=WP_003913800.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3457981 3459060 . + . ID=gene-AL42_RS21240;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=AL42_RS21240;old_locus_tag=AL42_03225 NZ_KK316784.1 Protein Homology CDS 3457981 3459060 . + 0 ID=cds-WP_003900633.1;Parent=gene-AL42_RS21240;Dbxref=GenBank:WP_003900633.1;Name=WP_003900633.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177925.1;locus_tag=AL42_RS21240;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_003900633.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3459111 3459506 . + . ID=gene-AL42_RS21245;Name=AL42_RS21245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21245;old_locus_tag=AL42_03226 NZ_KK316784.1 Protein Homology CDS 3459111 3459506 . + 0 ID=cds-WP_003416149.1;Parent=gene-AL42_RS21245;Dbxref=GenBank:WP_003416149.1;Name=WP_003416149.1;Ontology_term=GO:0006729,GO:0008124;gbkey=CDS;go_function=4-alpha-hydroxytetrahydrobiopterin dehydratase activity|0008124||IEA;go_process=tetrahydrobiopterin biosynthetic process|0006729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177926.1;locus_tag=AL42_RS21245;product=4a-hydroxytetrahydrobiopterin dehydratase;protein_id=WP_003416149.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3459503 3460015 . + . ID=gene-AL42_RS21250;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=AL42_RS21250;old_locus_tag=AL42_03227 NZ_KK316784.1 Protein Homology CDS 3459503 3460015 . + 0 ID=cds-WP_003899917.1;Parent=gene-AL42_RS21250;Dbxref=GenBank:WP_003899917.1;Name=WP_003899917.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177927.1;locus_tag=AL42_RS21250;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_003899917.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3460032 3460283 . + . ID=gene-AL42_RS21255;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=AL42_RS21255;old_locus_tag=AL42_03228 NZ_KK316784.1 Protein Homology CDS 3460032 3460283 . + 0 ID=cds-WP_003899918.1;Parent=gene-AL42_RS21255;Dbxref=GenBank:WP_003899918.1;Name=WP_003899918.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaD;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177928.1;locus_tag=AL42_RS21255;product=molybdopterin converting factor subunit 1;protein_id=WP_003899918.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3460406 3461074 . + . ID=gene-AL42_RS21260;Name=AL42_RS21260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21260;old_locus_tag=AL42_03229 NZ_KK316784.1 Protein Homology CDS 3460406 3461074 . + 0 ID=cds-WP_003899919.1;Parent=gene-AL42_RS21260;Dbxref=GenBank:WP_003899919.1;Name=WP_003899919.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217629.1;locus_tag=AL42_RS21260;product=HAD family hydrolase;protein_id=WP_003899919.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3461091 3461621 . + . ID=gene-AL42_RS21265;Name=AL42_RS21265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21265;old_locus_tag=AL42_03230 NZ_KK316784.1 Protein Homology CDS 3461091 3461621 . + 0 ID=cds-WP_003901545.1;Parent=gene-AL42_RS21265;Dbxref=GenBank:WP_003901545.1;Name=WP_003901545.1;Ontology_term=GO:0009116,GO:0001882,GO:0008270,GO:0019239;gbkey=CDS;go_function=nucleoside binding|0001882||IEA,zinc ion binding|0008270||IEA,deaminase activity|0019239||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217630.1;locus_tag=AL42_RS21265;product=nucleoside deaminase;protein_id=WP_003901545.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3461783 3463030 . + . ID=gene-AL42_RS21270;Name=AL42_RS21270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21270;old_locus_tag=AL42_03231 NZ_KK316784.1 Protein Homology CDS 3461783 3463030 . + 0 ID=cds-WP_031721922.1;Parent=gene-AL42_RS21270;Dbxref=GenBank:WP_031721922.1;Name=WP_031721922.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215563.1;locus_tag=AL42_RS21270;product=IS256-like element IS1081 family transposase;protein_id=WP_031721922.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3463108 3464277 . + . ID=gene-AL42_RS21275;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=AL42_RS21275;old_locus_tag=AL42_03232 NZ_KK316784.1 Protein Homology CDS 3463108 3464277 . + 0 ID=cds-WP_003899922.1;Parent=gene-AL42_RS21275;Dbxref=GenBank:WP_003899922.1;Name=WP_003899922.1;Ontology_term=GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177929.1;locus_tag=AL42_RS21275;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_003899922.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3464306 3465139 . + . ID=gene-AL42_RS21280;Name=AL42_RS21280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21280;old_locus_tag=AL42_03233 NZ_KK316784.1 Protein Homology CDS 3464306 3465139 . + 0 ID=cds-WP_003404293.1-2;Parent=gene-AL42_RS21280;Dbxref=GenBank:WP_003404293.1;Name=WP_003404293.1;Ontology_term=GO:0000098,GO:0016783;gbkey=CDS;go_function=sulfurtransferase activity|0016783||IEA;go_process=sulfur amino acid catabolic process|0000098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215330.1;locus_tag=AL42_RS21280;product=sulfurtransferase;protein_id=WP_003404293.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3465141 3465443 . + . ID=gene-AL42_RS21285;Name=AL42_RS21285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21285;old_locus_tag=AL42_03234 NZ_KK316784.1 Protein Homology CDS 3465141 3465443 . + 0 ID=cds-WP_003404278.1;Parent=gene-AL42_RS21285;Dbxref=GenBank:WP_003404278.1;Name=WP_003404278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215329.1;locus_tag=AL42_RS21285;product=DUF1416 domain-containing protein;protein_id=WP_003404278.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 3465444 3465875 . + . ID=gene-AL42_RS0105415;Name=AL42_RS0105415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS0105415;partial=true;pseudo=true;start_range=.,3465444 NZ_KK316784.1 Protein Homology CDS 3465444 3465875 . + 0 ID=cds-AL42_RS0105415;Parent=gene-AL42_RS0105415;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177929.1;locus_tag=AL42_RS0105415;partial=true;product=rhodanese-like domain-containing protein;pseudo=true;start_range=.,3465444;transl_table=11 NZ_KK316784.1 RefSeq gene 3465904 3466737 . + . ID=gene-AL42_RS21290;Name=AL42_RS21290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21290;old_locus_tag=AL42_03235 NZ_KK316784.1 Protein Homology CDS 3465904 3466737 . + 0 ID=cds-WP_003404293.1-3;Parent=gene-AL42_RS21290;Dbxref=GenBank:WP_003404293.1;Name=WP_003404293.1;Ontology_term=GO:0000098,GO:0016783;gbkey=CDS;go_function=sulfurtransferase activity|0016783||IEA;go_process=sulfur amino acid catabolic process|0000098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215330.1;locus_tag=AL42_RS21290;product=sulfurtransferase;protein_id=WP_003404293.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3466739 3467041 . + . ID=gene-AL42_RS21295;Name=AL42_RS21295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21295;old_locus_tag=AL42_03236 NZ_KK316784.1 Protein Homology CDS 3466739 3467041 . + 0 ID=cds-WP_003404278.1-2;Parent=gene-AL42_RS21295;Dbxref=GenBank:WP_003404278.1;Name=WP_003404278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215329.1;locus_tag=AL42_RS21295;product=DUF1416 domain-containing protein;protein_id=WP_003404278.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3467062 3467505 . + . ID=gene-AL42_RS21300;Name=AL42_RS21300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21300;old_locus_tag=AL42_03237 NZ_KK316784.1 Protein Homology CDS 3467062 3467505 . + 0 ID=cds-WP_003899923.1;Parent=gene-AL42_RS21300;Dbxref=GenBank:WP_003899923.1;Name=WP_003899923.1;Ontology_term=GO:0006777,GO:0030366;gbkey=CDS;go_function=molybdopterin synthase activity|0030366||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177931.1;locus_tag=AL42_RS21300;product=molybdenum cofactor biosynthesis protein MoaE;protein_id=WP_003899923.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3467502 3468104 . + . ID=gene-AL42_RS21305;Name=AL42_RS21305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21305;old_locus_tag=AL42_03238 NZ_KK316784.1 Protein Homology CDS 3467502 3468104 . + 0 ID=cds-WP_003899924.1;Parent=gene-AL42_RS21305;Dbxref=GenBank:WP_003899924.1;Name=WP_003899924.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217636.1;locus_tag=AL42_RS21305;product=class I SAM-dependent methyltransferase;protein_id=WP_003899924.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3468439 3469641 . + . ID=gene-AL42_RS21310;Name=cyp141;gbkey=Gene;gene=cyp141;gene_biotype=protein_coding;locus_tag=AL42_RS21310;old_locus_tag=AL42_03239 NZ_KK316784.1 Protein Homology CDS 3468439 3469641 . + 0 ID=cds-WP_003899925.1;Parent=gene-AL42_RS21310;Dbxref=GenBank:WP_003899925.1;Name=WP_003899925.1;gbkey=CDS;gene=cyp141;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217637.1;locus_tag=AL42_RS21310;product=cytochrome P450 Cyp141;protein_id=WP_003899925.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 3469723 3469842 . - . ID=gene-AL42_RS26980;Name=AL42_RS26980;end_range=3469842,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS26980;partial=true;pseudo=true NZ_KK316784.1 Protein Homology CDS 3469723 3469842 . - 0 ID=cds-AL42_RS26980;Parent=gene-AL42_RS26980;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3469842,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011291581.1;locus_tag=AL42_RS26980;partial=true;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 3470064 3470489 . + . ID=gene-AL42_RS21315;Name=AL42_RS21315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21315;old_locus_tag=AL42_03240 NZ_KK316784.1 Protein Homology CDS 3470064 3470489 . + 0 ID=cds-WP_003912101.1;Parent=gene-AL42_RS21315;Dbxref=GenBank:WP_003912101.1;Name=WP_003912101.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042840.4;locus_tag=AL42_RS21315;product=DUF6788 family protein;protein_id=WP_003912101.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3470499 3470993 . + . ID=gene-AL42_RS21320;Name=AL42_RS21320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21320;old_locus_tag=AL42_03241 NZ_KK316784.1 Protein Homology CDS 3470499 3470993 . + 0 ID=cds-WP_003901547.1;Parent=gene-AL42_RS21320;Dbxref=GenBank:WP_003901547.1;Name=WP_003901547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217639.1;locus_tag=AL42_RS21320;product=hypothetical protein;protein_id=WP_003901547.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 3471294 3471382 . + . ID=gene-AL42_RS28190;Name=AL42_RS28190;end_range=3471382,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS28190;partial=true;pseudo=true;start_range=.,3471294 NZ_KK316784.1 Protein Homology CDS 3471294 3471382 . + 0 ID=cds-AL42_RS28190;Parent=gene-AL42_RS28190;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3471382,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177773.1;locus_tag=AL42_RS28190;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3471294;transl_table=11 NZ_KK316784.1 RefSeq gene 3471436 3472305 . + . ID=gene-AL42_RS21325;Name=moaR1;gbkey=Gene;gene=moaR1;gene_biotype=protein_coding;locus_tag=AL42_RS21325;old_locus_tag=AL42_03242 NZ_KK316784.1 Protein Homology CDS 3471436 3472305 . + 0 ID=cds-WP_003900636.1;Parent=gene-AL42_RS21325;Dbxref=GenBank:WP_003900636.1;Name=WP_003900636.1;gbkey=CDS;gene=moaR1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217640.1;locus_tag=AL42_RS21325;product=transcriptional regulator MoaR1;protein_id=WP_003900636.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3472406 3473581 . - . ID=gene-AL42_RS21330;Name=AL42_RS21330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21330;old_locus_tag=AL42_03243 NZ_KK316784.1 Protein Homology CDS 3472406 3473581 . - 0 ID=cds-WP_003899929.1;Parent=gene-AL42_RS21330;Dbxref=GenBank:WP_003899929.1;Name=WP_003899929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177932.1;locus_tag=AL42_RS21330;product=PPE family protein;protein_id=WP_003899929.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3474077 3475111 . + . ID=gene-AL42_RS21340;Name=AL42_RS21340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21340;old_locus_tag=AL42_03245 NZ_KK316784.1 Protein Homology CDS 3474077 3475111 . + 0 ID=cds-WP_003416354.1;Parent=gene-AL42_RS21340;Dbxref=GenBank:WP_003416354.1;Name=WP_003416354.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217643.1;locus_tag=AL42_RS21340;product=Acg family FMN-binding oxidoreductase;protein_id=WP_003416354.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3475098 3475448 . - . ID=gene-AL42_RS0105420;Name=AL42_RS0105420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0105420 NZ_KK316784.1 Protein Homology CDS 3475098 3475448 . - 0 ID=cds-WP_003416355.1;Parent=gene-AL42_RS0105420;Dbxref=GenBank:WP_003416355.1;Name=WP_003416355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003416355.1;locus_tag=AL42_RS0105420;product=hypothetical protein;protein_id=WP_003416355.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3475530 3475754 . - . ID=gene-AL42_RS27290;Name=AL42_RS27290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27290 NZ_KK316784.1 GeneMarkS-2+ CDS 3475530 3475754 . - 0 ID=cds-WP_009938000.1;Parent=gene-AL42_RS27290;Dbxref=GenBank:WP_009938000.1;Name=WP_009938000.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL42_RS27290;product=hypothetical protein;protein_id=WP_009938000.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3475883 3477144 . - . ID=gene-AL42_RS21345;Name=AL42_RS21345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21345;old_locus_tag=AL42_03246 NZ_KK316784.1 Protein Homology CDS 3476856 3477144 . - 0 ID=cds-WP_087902221.1-9;Parent=gene-AL42_RS21345;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL42_RS21345;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316784.1 Protein Homology CDS 3475883 3476856 . - 2 ID=cds-WP_087902221.1-9;Parent=gene-AL42_RS21345;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL42_RS21345;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3477101 3477469 . - . ID=gene-AL42_RS0105430;Name=AL42_RS0105430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0105430 NZ_KK316784.1 GeneMarkS-2+ CDS 3477101 3477469 . - 0 ID=cds-WP_014584891.1;Parent=gene-AL42_RS0105430;Dbxref=GenBank:WP_014584891.1;Name=WP_014584891.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL42_RS0105430;product=hypothetical protein;protein_id=WP_014584891.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3477948 3478280 . + . ID=gene-AL42_RS21355;Name=AL42_RS21355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21355;old_locus_tag=AL42_03249 NZ_KK316784.1 Protein Homology CDS 3477948 3478280 . + 0 ID=cds-WP_003416360.1;Parent=gene-AL42_RS21355;Dbxref=GenBank:WP_003416360.1;Name=WP_003416360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003416360.1;locus_tag=AL42_RS21355;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_003416360.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3478263 3479654 . - . ID=gene-AL42_RS21360;Name=tgs1;gbkey=Gene;gene=tgs1;gene_biotype=protein_coding;locus_tag=AL42_RS21360;old_locus_tag=AL42_03250 NZ_KK316784.1 Protein Homology CDS 3478263 3479654 . - 0 ID=cds-WP_003899932.1;Parent=gene-AL42_RS21360;Dbxref=GenBank:WP_003899932.1;Name=WP_003899932.1;gbkey=CDS;gene=tgs1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217646.1;locus_tag=AL42_RS21360;product=diacylglycerol O-acyltransferase;protein_id=WP_003899932.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3479839 3480837 . + . ID=gene-AL42_RS21365;Name=AL42_RS21365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21365;old_locus_tag=AL42_03251 NZ_KK316784.1 Protein Homology CDS 3479839 3480837 . + 0 ID=cds-WP_003416362.1;Parent=gene-AL42_RS21365;Dbxref=GenBank:WP_003416362.1;Name=WP_003416362.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217647.3;locus_tag=AL42_RS21365;product=Acg family FMN-binding oxidoreductase;protein_id=WP_003416362.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3480817 3482553 . - . ID=gene-AL42_RS21370;Name=dosS;gbkey=Gene;gene=dosS;gene_biotype=protein_coding;gene_synonym=devS;locus_tag=AL42_RS21370;old_locus_tag=AL42_03252 NZ_KK316784.1 Protein Homology CDS 3480817 3482553 . - 0 ID=cds-WP_003899933.1;Parent=gene-AL42_RS21370;Dbxref=GenBank:WP_003899933.1;Name=WP_003899933.1;gbkey=CDS;gene=dosS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217648.1;locus_tag=AL42_RS21370;product=hypoxia sensor histidine kinase DosS/DevS;protein_id=WP_003899933.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3482550 3483203 . - . ID=gene-AL42_RS21375;Name=dosR;gbkey=Gene;gene=dosR;gene_biotype=protein_coding;gene_synonym=devR;locus_tag=AL42_RS21375;old_locus_tag=AL42_03253 NZ_KK316784.1 Protein Homology CDS 3482550 3483203 . - 0 ID=cds-WP_003416369.1;Parent=gene-AL42_RS21375;Dbxref=GenBank:WP_003416369.1;Name=WP_003416369.1;gbkey=CDS;gene=dosR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217649.1;locus_tag=AL42_RS21375;product=hypoxia response regulator transcription factor DosR/DevR;protein_id=WP_003416369.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3483231 3484037 . - . ID=gene-AL42_RS21380;Name=AL42_RS21380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21380;old_locus_tag=AL42_03254 NZ_KK316784.1 Protein Homology CDS 3483231 3484037 . - 0 ID=cds-WP_003416373.1;Parent=gene-AL42_RS21380;Dbxref=GenBank:WP_003416373.1;Name=WP_003416373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217650.1;locus_tag=AL42_RS21380;product=universal stress protein;protein_id=WP_003416373.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 3484622 3485269 . + . ID=gene-AL42_RS26405;Name=AL42_RS26405;end_range=3485269,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS26405;old_locus_tag=AL42_03255;partial=true;pseudo=true NZ_KK316784.1 Protein Homology CDS 3484622 3485269 . + 0 ID=cds-AL42_RS26405;Parent=gene-AL42_RS26405;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3485269,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003416381.1;locus_tag=AL42_RS26405;partial=true;product=PPE family protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 3485472 3486614 . + . ID=gene-AL42_RS21390;Name=AL42_RS21390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21390;old_locus_tag=AL42_03256 NZ_KK316784.1 Protein Homology CDS 3485472 3486614 . + 0 ID=cds-WP_003416381.1;Parent=gene-AL42_RS21390;Dbxref=GenBank:WP_003416381.1;Name=WP_003416381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177935.1;locus_tag=AL42_RS21390;product=PPE family protein;protein_id=WP_003416381.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3486623 3486955 . - . ID=gene-AL42_RS21395;Name=AL42_RS21395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21395;old_locus_tag=AL42_03257 NZ_KK316784.1 Protein Homology CDS 3486623 3486955 . - 0 ID=cds-WP_003416383.1;Parent=gene-AL42_RS21395;Dbxref=GenBank:WP_003416383.1;Name=WP_003416383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007411850.1;locus_tag=AL42_RS21395;product=hypothetical protein;protein_id=WP_003416383.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3487071 3487853 . + . ID=gene-AL42_RS21400;Name=hisN;gbkey=Gene;gene=hisN;gene_biotype=protein_coding;locus_tag=AL42_RS21400;old_locus_tag=AL42_03258 NZ_KK316784.1 Protein Homology CDS 3487071 3487853 . + 0 ID=cds-WP_003416388.1;Parent=gene-AL42_RS21400;Dbxref=GenBank:WP_003416388.1;Name=WP_003416388.1;Ontology_term=GO:0000105,GO:0004401;gbkey=CDS;gene=hisN;go_function=histidinol-phosphatase activity|0004401||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217653.1;locus_tag=AL42_RS21400;product=histidinol-phosphatase;protein_id=WP_003416388.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3487873 3488961 . + . ID=gene-AL42_RS21405;Name=amrS;gbkey=Gene;gene=amrS;gene_biotype=protein_coding;locus_tag=AL42_RS21405;old_locus_tag=AL42_03259 NZ_KK316784.1 Protein Homology CDS 3487873 3488961 . + 0 ID=cds-WP_003899934.1;Parent=gene-AL42_RS21405;Dbxref=GenBank:WP_003899934.1;Name=WP_003899934.1;Ontology_term=GO:0051536;gbkey=CDS;gene=amrS;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217654.1;locus_tag=AL42_RS21405;product=AmmeMemoRadiSam system radical SAM enzyme;protein_id=WP_003899934.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3489041 3490447 . + . ID=gene-AL42_RS21410;Name=AL42_RS21410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21410;old_locus_tag=AL42_03260 NZ_KK316784.1 Protein Homology CDS 3489041 3490447 . + 0 ID=cds-WP_003900638.1;Parent=gene-AL42_RS21410;Dbxref=GenBank:WP_003900638.1;Name=WP_003900638.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217655.1;locus_tag=AL42_RS21410;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003900638.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3490468 3491673 . + . ID=gene-AL42_RS21415;Name=AL42_RS21415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21415;old_locus_tag=AL42_03261 NZ_KK316784.1 Protein Homology CDS 3490468 3491673 . + 0 ID=cds-WP_003899936.1;Parent=gene-AL42_RS21415;Dbxref=GenBank:WP_003899936.1;Name=WP_003899936.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217656.1;locus_tag=AL42_RS21415;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003899936.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3491773 3492744 . + . ID=gene-AL42_RS21420;Name=AL42_RS21420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21420;old_locus_tag=AL42_03262 NZ_KK316784.1 Protein Homology CDS 3491773 3492744 . + 0 ID=cds-WP_003416403.1;Parent=gene-AL42_RS21420;Dbxref=GenBank:WP_003416403.1;Name=WP_003416403.1;Ontology_term=GO:0016491,GO:0016655,GO:0048038,GO:0070402;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,quinone binding|0048038||IEA,NADPH binding|0070402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217657.1;locus_tag=AL42_RS21420;product=NADPH:quinone oxidoreductase family protein;protein_id=WP_003416403.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3492796 3493224 . - . ID=gene-AL42_RS21425;Name=AL42_RS21425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21425;old_locus_tag=AL42_03263 NZ_KK316784.1 Protein Homology CDS 3492796 3493224 . - 0 ID=cds-WP_003416407.1;Parent=gene-AL42_RS21425;Dbxref=GenBank:WP_003416407.1;Name=WP_003416407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217658.1;locus_tag=AL42_RS21425;product=DUF6188 family protein;protein_id=WP_003416407.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3493332 3493733 . + . ID=gene-AL42_RS21430;Name=AL42_RS21430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21430;old_locus_tag=AL42_03264 NZ_KK316784.1 Protein Homology CDS 3493332 3493733 . + 0 ID=cds-WP_003416410.1;Parent=gene-AL42_RS21430;Dbxref=GenBank:WP_003416410.1;Name=WP_003416410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217659.1;locus_tag=AL42_RS21430;product=Rv3143 family two-component system response regulator;protein_id=WP_003416410.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3493766 3494995 . - . ID=gene-AL42_RS21435;Name=AL42_RS21435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21435;old_locus_tag=AL42_03265 NZ_KK316784.1 Protein Homology CDS 3493766 3494995 . - 0 ID=cds-WP_003901551.1;Parent=gene-AL42_RS21435;Dbxref=GenBank:WP_003901551.1;Name=WP_003901551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177936.2;locus_tag=AL42_RS21435;product=PPE family protein;protein_id=WP_003901551.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3495360 3495746 . + . ID=gene-AL42_RS21440;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=AL42_RS21440;old_locus_tag=AL42_03266 NZ_KK316784.1 Protein Homology CDS 3495360 3495746 . + 0 ID=cds-WP_003416417.1;Parent=gene-AL42_RS21440;Dbxref=GenBank:WP_003416417.1;Name=WP_003416417.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoA;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217661.1;locus_tag=AL42_RS21440;product=NADH-quinone oxidoreductase subunit A;protein_id=WP_003416417.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3495755 3496309 . + . ID=gene-AL42_RS21445;Name=nuoB;gbkey=Gene;gene=nuoB;gene_biotype=protein_coding;locus_tag=AL42_RS21445;old_locus_tag=AL42_03267 NZ_KK316784.1 Protein Homology CDS 3495755 3496309 . + 0 ID=cds-WP_003416420.1;Parent=gene-AL42_RS21445;Dbxref=GenBank:WP_003416420.1;Name=WP_003416420.1;Ontology_term=GO:0008137,GO:0016655,GO:0048038,GO:0051539,GO:0005886,GO:0045271;gbkey=CDS;gene=nuoB;go_component=plasma membrane|0005886||IEA,respiratory chain complex I|0045271||IEA;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,quinone binding|0048038||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003874821.1;locus_tag=AL42_RS21445;product=NuoB/complex I 20 kDa subunit family protein;protein_id=WP_003416420.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3496306 3497016 . + . ID=gene-AL42_RS21450;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=AL42_RS21450;old_locus_tag=AL42_03268 NZ_KK316784.1 Protein Homology CDS 3496306 3497016 . + 0 ID=cds-WP_003416425.1;Parent=gene-AL42_RS21450;Dbxref=GenBank:WP_003416425.1;Name=WP_003416425.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoC;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217663.1;locus_tag=AL42_RS21450;product=NADH-quinone oxidoreductase subunit C;protein_id=WP_003416425.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3497016 3498338 . + . ID=gene-AL42_RS21455;Name=nuoD;gbkey=Gene;gene=nuoD;gene_biotype=protein_coding;locus_tag=AL42_RS21455;old_locus_tag=AL42_03269 NZ_KK316784.1 Protein Homology CDS 3497016 3498338 . + 0 ID=cds-WP_003416430.1;Parent=gene-AL42_RS21455;Dbxref=GenBank:WP_003416430.1;Name=WP_003416430.1;Ontology_term=GO:0050136;gbkey=CDS;gene=nuoD;go_function=NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217664.1;locus_tag=AL42_RS21455;product=NADH dehydrogenase (quinone) subunit D;protein_id=WP_003416430.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3498335 3499093 . + . ID=gene-AL42_RS21460;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=AL42_RS21460;old_locus_tag=AL42_03270 NZ_KK316784.1 Protein Homology CDS 3498335 3499093 . + 0 ID=cds-WP_003416434.1;Parent=gene-AL42_RS21460;Dbxref=GenBank:WP_003416434.1;Name=WP_003416434.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217665.1;locus_tag=AL42_RS21460;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_003416434.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3499090 3500427 . + . ID=gene-AL42_RS21465;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=AL42_RS21465;old_locus_tag=AL42_03271 NZ_KK316784.1 Protein Homology CDS 3499090 3500427 . + 0 ID=cds-WP_003416439.1;Parent=gene-AL42_RS21465;Dbxref=GenBank:WP_003416439.1;Name=WP_003416439.1;Ontology_term=GO:0010181,GO:0050136,GO:0051287,GO:0051539;gbkey=CDS;gene=nuoF;go_function=FMN binding|0010181||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,NAD binding|0051287||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217666.1;locus_tag=AL42_RS21465;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_003416439.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3500424 3502844 . + . ID=gene-AL42_RS21470;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=AL42_RS21470;old_locus_tag=AL42_03272 NZ_KK316784.1 Protein Homology CDS 3500424 3502844 . + 0 ID=cds-WP_003899937.1;Parent=gene-AL42_RS21470;Dbxref=GenBank:WP_003899937.1;Name=WP_003899937.1;Ontology_term=GO:0042773,GO:0008137,GO:0043546,GO:0051536,GO:0016020;gbkey=CDS;gene=nuoG;go_component=membrane|0016020||IEA;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,molybdopterin cofactor binding|0043546||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217667.1;locus_tag=AL42_RS21470;product=NADH-quinone oxidoreductase subunit G;protein_id=WP_003899937.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3502960 3504192 . + . ID=gene-AL42_RS21475;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=AL42_RS21475;old_locus_tag=AL42_03273 NZ_KK316784.1 Protein Homology CDS 3502960 3504192 . + 0 ID=cds-WP_003416445.1;Parent=gene-AL42_RS21475;Dbxref=GenBank:WP_003416445.1;Name=WP_003416445.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoH;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217668.1;locus_tag=AL42_RS21475;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_003416445.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3504185 3504820 . + . ID=gene-AL42_RS21480;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=AL42_RS21480;old_locus_tag=AL42_03274 NZ_KK316784.1 Protein Homology CDS 3504185 3504820 . + 0 ID=cds-WP_003899938.1;Parent=gene-AL42_RS21480;Dbxref=GenBank:WP_003899938.1;Name=WP_003899938.1;Ontology_term=GO:0016651;gbkey=CDS;gene=nuoI;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217669.1;locus_tag=AL42_RS21480;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_003899938.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3504817 3505605 . + . ID=gene-AL42_RS21485;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=AL42_RS21485;old_locus_tag=AL42_03275 NZ_KK316784.1 Protein Homology CDS 3504817 3505605 . + 0 ID=cds-WP_003416449.1;Parent=gene-AL42_RS21485;Dbxref=GenBank:WP_003416449.1;Name=WP_003416449.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217670.1;locus_tag=AL42_RS21485;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_003416449.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3505602 3505901 . + . ID=gene-AL42_RS21490;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=AL42_RS21490;old_locus_tag=AL42_03276 NZ_KK316784.1 Protein Homology CDS 3505602 3505901 . + 0 ID=cds-WP_003416452.1;Parent=gene-AL42_RS21490;Dbxref=GenBank:WP_003416452.1;Name=WP_003416452.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217671.1;locus_tag=AL42_RS21490;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_003416452.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3505912 3507813 . + . ID=gene-AL42_RS21495;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=AL42_RS21495;old_locus_tag=AL42_03277 NZ_KK316784.1 Protein Homology CDS 3505912 3507813 . + 0 ID=cds-WP_003900642.1;Parent=gene-AL42_RS21495;Dbxref=GenBank:WP_003900642.1;Name=WP_003900642.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217672.1;locus_tag=AL42_RS21495;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_003900642.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3507810 3509471 . + . ID=gene-AL42_RS21500;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=AL42_RS21500;old_locus_tag=AL42_03278 NZ_KK316784.1 Protein Homology CDS 3507810 3509471 . + 0 ID=cds-WP_003416460.1;Parent=gene-AL42_RS21500;Dbxref=GenBank:WP_003416460.1;Name=WP_003416460.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217673.1;locus_tag=AL42_RS21500;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_003416460.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3509468 3511063 . + . ID=gene-AL42_RS21505;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=AL42_RS21505;old_locus_tag=AL42_03279 NZ_KK316784.1 Protein Homology CDS 3509468 3511063 . + 0 ID=cds-WP_003900644.1;Parent=gene-AL42_RS21505;Dbxref=GenBank:WP_003900644.1;Name=WP_003900644.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217674.1;locus_tag=AL42_RS21505;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_003900644.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3511069 3512838 . - . ID=gene-AL42_RS21510;Name=AL42_RS21510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21510;old_locus_tag=AL42_03280 NZ_KK316784.1 Protein Homology CDS 3511069 3512838 . - 0 ID=cds-WP_003910812.1;Parent=gene-AL42_RS21510;Dbxref=GenBank:WP_003910812.1;Name=WP_003910812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177937.1;locus_tag=AL42_RS21510;product=PPE family protein;protein_id=WP_003910812.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3513013 3513654 . - . ID=gene-AL42_RS21515;Name=AL42_RS21515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21515;old_locus_tag=AL42_03281 NZ_KK316784.1 Protein Homology CDS 3513013 3513654 . - 0 ID=cds-WP_029400476.1;Parent=gene-AL42_RS21515;Dbxref=GenBank:WP_029400476.1;Name=WP_029400476.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217676.1;locus_tag=AL42_RS21515;product=TetR/AcrR family transcriptional regulator;protein_id=WP_029400476.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3513665 3514813 . - . ID=gene-AL42_RS21520;Name=AL42_RS21520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21520;old_locus_tag=AL42_03282 NZ_KK316784.1 Protein Homology CDS 3513665 3514813 . - 0 ID=cds-WP_003416576.1;Parent=gene-AL42_RS21520;Dbxref=GenBank:WP_003416576.1;Name=WP_003416576.1;Ontology_term=GO:0005506,GO:0016705,GO:0051537;gbkey=CDS;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217677.1;locus_tag=AL42_RS21520;product=aromatic ring-hydroxylating oxygenase subunit alpha;protein_id=WP_003416576.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3514883 3515320 . - . ID=gene-AL42_RS21525;Name=AL42_RS21525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21525;old_locus_tag=AL42_03283 NZ_KK316784.1 Protein Homology CDS 3514883 3515320 . - 0 ID=cds-WP_003900648.1;Parent=gene-AL42_RS21525;Dbxref=GenBank:WP_003900648.1;Name=WP_003900648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217678.1;locus_tag=AL42_RS21525;product=integral membrane protein;protein_id=WP_003900648.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3515317 3516588 . - . ID=gene-AL42_RS21530;Name=AL42_RS21530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21530;old_locus_tag=AL42_03284 NZ_KK316784.1 Protein Homology CDS 3515317 3516588 . - 0 ID=cds-WP_003416584.1;Parent=gene-AL42_RS21530;Dbxref=GenBank:WP_003416584.1;Name=WP_003416584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217679.1;locus_tag=AL42_RS21530;product=DUF58 domain-containing protein;protein_id=WP_003416584.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3516618 3517580 . - . ID=gene-AL42_RS21535;Name=AL42_RS21535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21535;old_locus_tag=AL42_03285 NZ_KK316784.1 Protein Homology CDS 3516618 3517580 . - 0 ID=cds-WP_003416588.1;Parent=gene-AL42_RS21535;Dbxref=GenBank:WP_003416588.1;Name=WP_003416588.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217680.1;locus_tag=AL42_RS21535;product=AAA family ATPase;protein_id=WP_003416588.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3517588 3518070 . - . ID=gene-AL42_RS21540;Name=AL42_RS21540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21540;old_locus_tag=AL42_03286 NZ_KK316784.1 Protein Homology CDS 3517588 3518070 . - 0 ID=cds-WP_003416593.1;Parent=gene-AL42_RS21540;Dbxref=GenBank:WP_003416593.1;Name=WP_003416593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217681.1;locus_tag=AL42_RS21540;product=hypothetical protein;protein_id=WP_003416593.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3518067 3519026 . - . ID=gene-AL42_RS21545;Name=AL42_RS21545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21545;old_locus_tag=AL42_03287 NZ_KK316784.1 Protein Homology CDS 3518067 3519026 . - 0 ID=cds-WP_003900649.1;Parent=gene-AL42_RS21545;Dbxref=GenBank:WP_003900649.1;Name=WP_003900649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217682.1;locus_tag=AL42_RS21545;product=DUF4129 domain-containing protein;protein_id=WP_003900649.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3519106 3519732 . - . ID=gene-AL42_RS21550;Name=AL42_RS21550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21550;old_locus_tag=AL42_03288 NZ_KK316784.1 Protein Homology CDS 3519106 3519732 . - 0 ID=cds-WP_003416599.1;Parent=gene-AL42_RS21550;Dbxref=GenBank:WP_003416599.1;Name=WP_003416599.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217683.1;locus_tag=AL42_RS21550;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003416599.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3519777 3520913 . + . ID=gene-AL42_RS21555;Name=AL42_RS21555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21555;old_locus_tag=AL42_03289 NZ_KK316784.1 Protein Homology CDS 3519777 3520913 . + 0 ID=cds-WP_003900650.1;Parent=gene-AL42_RS21555;Dbxref=GenBank:WP_003900650.1;Name=WP_003900650.1;Ontology_term=GO:0016310,GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217684.1;locus_tag=AL42_RS21555;product=phosphotransferase family protein;protein_id=WP_003900650.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3520913 3522037 . + . ID=gene-AL42_RS21560;Name=AL42_RS21560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21560;old_locus_tag=AL42_03290 NZ_KK316784.1 Protein Homology CDS 3520913 3522037 . + 0 ID=cds-WP_003416605.1;Parent=gene-AL42_RS21560;Dbxref=GenBank:WP_003416605.1;Name=WP_003416605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217685.1;locus_tag=AL42_RS21560;product=Rv3169 family protein;protein_id=WP_003416605.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3522180 3523526 . + . ID=gene-AL42_RS21565;Name=aofH;gbkey=Gene;gene=aofH;gene_biotype=protein_coding;locus_tag=AL42_RS21565;old_locus_tag=AL42_03291 NZ_KK316784.1 Protein Homology CDS 3522180 3523526 . + 0 ID=cds-WP_003416607.1;Parent=gene-AL42_RS21565;Dbxref=GenBank:WP_003416607.1;Name=WP_003416607.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;gene=aofH;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217686.1;locus_tag=AL42_RS21565;product=flavin monoamine oxidase family protein;protein_id=WP_003416607.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3523521 3524492 . - . ID=gene-AL42_RS21570;Name=hpx;gbkey=Gene;gene=hpx;gene_biotype=protein_coding;locus_tag=AL42_RS21570;old_locus_tag=AL42_03292 NZ_KK316784.1 Protein Homology CDS 3523521 3524492 . - 0 ID=cds-WP_010924623.1;Parent=gene-AL42_RS21570;Dbxref=GenBank:WP_010924623.1;Name=WP_010924623.1;gbkey=CDS;gene=hpx;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012393253.1;locus_tag=AL42_RS21570;product=alpha/beta fold hydrolase;protein_id=WP_010924623.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3524663 3524842 . - . ID=gene-AL42_RS27295;Name=AL42_RS27295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27295 NZ_KK316784.1 Protein Homology CDS 3524663 3524842 . - 0 ID=cds-WP_003917749.1;Parent=gene-AL42_RS27295;Dbxref=GenBank:WP_003917749.1;Name=WP_003917749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917749.1;locus_tag=AL42_RS27295;product=hypothetical protein;protein_id=WP_003917749.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3525118 3525720 . - . ID=gene-AL42_RS21575;Name=AL42_RS21575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21575;old_locus_tag=AL42_03294 NZ_KK316784.1 Protein Homology CDS 3525118 3525720 . - 0 ID=cds-WP_003416617.1;Parent=gene-AL42_RS21575;Dbxref=GenBank:WP_003416617.1;Name=WP_003416617.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217689.1;locus_tag=AL42_RS21575;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003416617.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3525813 3526520 . + . ID=gene-AL42_RS21580;Name=AL42_RS21580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21580;old_locus_tag=AL42_03295 NZ_KK316784.1 Protein Homology CDS 3525813 3526520 . + 0 ID=cds-WP_003906024.1;Parent=gene-AL42_RS21580;Dbxref=GenBank:WP_003906024.1;Name=WP_003906024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217690.1;locus_tag=AL42_RS21580;product=SDR family oxidoreductase;protein_id=WP_003906024.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3526535 3528022 . + . ID=gene-AL42_RS21585;Name=AL42_RS21585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21585;old_locus_tag=AL42_03296 NZ_KK316784.1 Protein Homology CDS 3526535 3528022 . + 0 ID=cds-WP_003416624.1;Parent=gene-AL42_RS21585;Dbxref=GenBank:WP_003416624.1;Name=WP_003416624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217691.1;locus_tag=AL42_RS21585;product=amidase;protein_id=WP_003416624.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3528019 3528975 . - . ID=gene-AL42_RS21590;Name=mesT;gbkey=Gene;gene=mesT;gene_biotype=protein_coding;locus_tag=AL42_RS21590;old_locus_tag=AL42_03297 NZ_KK316784.1 Protein Homology CDS 3528019 3528975 . - 0 ID=cds-WP_003416627.1;Parent=gene-AL42_RS21590;Dbxref=GenBank:WP_003416627.1;Name=WP_003416627.1;gbkey=CDS;gene=mesT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177938.1;locus_tag=AL42_RS21590;product=epoxide hydrolase MesT;protein_id=WP_003416627.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3529122 3529982 . + . ID=gene-AL42_RS21595;Name=AL42_RS21595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21595;old_locus_tag=AL42_03298 NZ_KK316784.1 Protein Homology CDS 3529122 3529982 . + 0 ID=cds-WP_003416628.1;Parent=gene-AL42_RS21595;Dbxref=GenBank:WP_003416628.1;Name=WP_003416628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217693.1;locus_tag=AL42_RS21595;product=alpha/beta fold hydrolase;protein_id=WP_003416628.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3529957 3530472 . + . ID=gene-AL42_RS21600;Name=AL42_RS21600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21600;old_locus_tag=AL42_03299 NZ_KK316784.1 Protein Homology CDS 3529957 3530472 . + 0 ID=cds-WP_003899950.1;Parent=gene-AL42_RS21600;Dbxref=GenBank:WP_003899950.1;Name=WP_003899950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899950.1;locus_tag=AL42_RS21600;product=nitroreductase family deazaflavin-dependent oxidoreductase;protein_id=WP_003899950.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 3530476 3530699 . + . ID=gene-AL42_RS27740;Name=AL42_RS27740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS27740;partial=true;pseudo=true;start_range=.,3530476 NZ_KK316784.1 Protein Homology CDS 3530476 3530699 . + 0 ID=cds-AL42_RS27740;Parent=gene-AL42_RS27740;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011562696.1;locus_tag=AL42_RS27740;partial=true;product=(R)-hydratase;pseudo=true;start_range=.,3530476;transl_table=11 NZ_KK316784.1 RefSeq gene 3530712 3531005 . + . ID=gene-AL42_RS0105450;Name=AL42_RS0105450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0105450 NZ_KK316784.1 Protein Homology CDS 3530712 3531005 . + 0 ID=cds-WP_003416635.1;Parent=gene-AL42_RS0105450;Dbxref=GenBank:WP_003416635.1;Name=WP_003416635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030043.1;locus_tag=AL42_RS0105450;product=hypothetical protein;protein_id=WP_003416635.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3531293 3532582 . + . ID=gene-AL42_RS21605;Name=AL42_RS21605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21605;old_locus_tag=AL42_03300 NZ_KK316784.1 Protein Homology CDS 3531293 3532582 . + 0 ID=cds-WP_003416640.1;Parent=gene-AL42_RS21605;Dbxref=GenBank:WP_003416640.1;Name=WP_003416640.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217695.1;locus_tag=AL42_RS21605;product=ATP-binding protein;protein_id=WP_003416640.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3532917 3534178 . - . ID=gene-AL42_RS21610;Name=AL42_RS21610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21610;old_locus_tag=AL42_03301 NZ_KK316784.1 Protein Homology CDS 3533890 3534178 . - 0 ID=cds-WP_087902221.1-10;Parent=gene-AL42_RS21610;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL42_RS21610;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316784.1 Protein Homology CDS 3532917 3533890 . - 2 ID=cds-WP_087902221.1-10;Parent=gene-AL42_RS21610;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL42_RS21610;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3534287 3534721 . - . ID=gene-AL42_RS21620;Name=AL42_RS21620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21620;old_locus_tag=AL42_03303 NZ_KK316784.1 Protein Homology CDS 3534287 3534721 . - 0 ID=cds-WP_003899952.1;Parent=gene-AL42_RS21620;Dbxref=GenBank:WP_003899952.1;Name=WP_003899952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217696.1;locus_tag=AL42_RS21620;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003899952.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3534724 3535176 . - . ID=gene-AL42_RS21625;Name=AL42_RS21625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21625;old_locus_tag=AL42_03304 NZ_KK316784.1 Protein Homology CDS 3534724 3535176 . - 0 ID=cds-WP_003899953.1;Parent=gene-AL42_RS21625;Dbxref=GenBank:WP_003899953.1;Name=WP_003899953.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217697.1;locus_tag=AL42_RS21625;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_003899953.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3535407 3535751 . + . ID=gene-AL42_RS21630;Name=AL42_RS21630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21630;old_locus_tag=AL42_03305 NZ_KK316784.1 Protein Homology CDS 3535407 3535751 . + 0 ID=cds-WP_003899954.1;Parent=gene-AL42_RS21630;Dbxref=GenBank:WP_003899954.1;Name=WP_003899954.1;Ontology_term=GO:0004519,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217698.1;locus_tag=AL42_RS21630;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_003899954.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3535748 3536077 . + . ID=gene-AL42_RS21635;Name=AL42_RS21635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21635;old_locus_tag=AL42_03306 NZ_KK316784.1 Protein Homology CDS 3535748 3536077 . + 0 ID=cds-WP_003899955.1;Parent=gene-AL42_RS21635;Dbxref=GenBank:WP_003899955.1;Name=WP_003899955.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217699.1;locus_tag=AL42_RS21635;product=helix-turn-helix domain-containing protein;protein_id=WP_003899955.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3536615 3536962 . + . ID=gene-AL42_RS21640;Name=AL42_RS21640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21640;old_locus_tag=AL42_03307 NZ_KK316784.1 Protein Homology CDS 3536615 3536962 . + 0 ID=cds-WP_003899956.1;Parent=gene-AL42_RS21640;Dbxref=GenBank:WP_003899956.1;Name=WP_003899956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217704.1;locus_tag=AL42_RS21640;product=antitoxin Xre/MbcA/ParS toxin-binding domain-containing protein;protein_id=WP_003899956.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3536959 3537579 . + . ID=gene-AL42_RS21645;Name=AL42_RS21645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21645;old_locus_tag=AL42_03308 NZ_KK316784.1 Protein Homology CDS 3536959 3537579 . + 0 ID=cds-WP_003899957.1;Parent=gene-AL42_RS21645;Dbxref=GenBank:WP_003899957.1;Name=WP_003899957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217705.1;locus_tag=AL42_RS21645;product=RES family NAD+ phosphorylase;protein_id=WP_003899957.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3537739 3539004 . - . ID=gene-AL42_RS21650;Name=AL42_RS21650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21650;old_locus_tag=AL42_03309 NZ_KK316784.1 Protein Homology CDS 3537739 3539004 . - 0 ID=cds-WP_003902423.1;Parent=gene-AL42_RS21650;Dbxref=GenBank:WP_003902423.1;Name=WP_003902423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217706.1;locus_tag=AL42_RS21650;product=hypothetical protein;protein_id=WP_003902423.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3539172 3539381 . + . ID=gene-AL42_RS21655;Name=AL42_RS21655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21655;old_locus_tag=AL42_03310 NZ_KK316784.1 Protein Homology CDS 3539172 3539381 . + 0 ID=cds-WP_003416778.1;Parent=gene-AL42_RS21655;Dbxref=GenBank:WP_003416778.1;Name=WP_003416778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007411905.1;locus_tag=AL42_RS21655;product=hypothetical protein;protein_id=WP_003416778.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3539416 3539601 . + . ID=gene-AL42_RS28035;Name=AL42_RS28035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS28035 NZ_KK316784.1 Protein Homology CDS 3539416 3539601 . + 0 ID=cds-WP_003908177.1;Parent=gene-AL42_RS28035;Dbxref=GenBank:WP_003908177.1;Name=WP_003908177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003908177.1;locus_tag=AL42_RS28035;product=hypothetical protein;protein_id=WP_003908177.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3539628 3540884 . - . ID=gene-AL42_RS21660;Name=AL42_RS21660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21660;old_locus_tag=AL42_03311 NZ_KK316784.1 Protein Homology CDS 3539628 3540884 . - 0 ID=cds-WP_003899959.1;Parent=gene-AL42_RS21660;Dbxref=GenBank:WP_003899959.1;Name=WP_003899959.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899959.1;locus_tag=AL42_RS21660;product=IS30 family transposase;protein_id=WP_003899959.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3540946 3541170 . - . ID=gene-AL42_RS0105460;Name=AL42_RS0105460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0105460 NZ_KK316784.1 Protein Homology CDS 3540946 3541170 . - 0 ID=cds-WP_003416790.1;Parent=gene-AL42_RS0105460;Dbxref=GenBank:WP_003416790.1;Name=WP_003416790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003909838.1;locus_tag=AL42_RS0105460;product=hypothetical protein;protein_id=WP_003416790.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3541684 3541760 . - . ID=gene-AL42_RS21665;Name=AL42_RS21665;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL42_RS21665;old_locus_tag=AL42_03312 NZ_KK316784.1 tRNAscan-SE tRNA 3541684 3541760 . - . ID=rna-AL42_RS21665;Parent=gene-AL42_RS21665;anticodon=(pos:complement(3541724..3541726));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS21665;product=tRNA-Met NZ_KK316784.1 tRNAscan-SE exon 3541684 3541760 . - . ID=exon-AL42_RS21665-1;Parent=rna-AL42_RS21665;anticodon=(pos:complement(3541724..3541726));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS21665;product=tRNA-Met NZ_KK316784.1 RefSeq gene 3541877 3542341 . + . ID=gene-AL42_RS21670;Name=AL42_RS21670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21670;old_locus_tag=AL42_03313 NZ_KK316784.1 Protein Homology CDS 3541877 3542341 . + 0 ID=cds-WP_003913440.1;Parent=gene-AL42_RS21670;Dbxref=GenBank:WP_003913440.1;Name=WP_003913440.1;Ontology_term=GO:0016705;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: protein motif:HMM:NF012517.6;locus_tag=AL42_RS21670;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_003913440.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3542511 3545489 . - . ID=gene-AL42_RS21675;Name=AL42_RS21675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21675;old_locus_tag=AL42_03314 NZ_KK316784.1 Protein Homology CDS 3542511 3545489 . - 0 ID=cds-WP_003899961.1;Parent=gene-AL42_RS21675;Dbxref=GenBank:WP_003899961.1;Name=WP_003899961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217709.1;locus_tag=AL42_RS21675;product=UPF0182 family protein;protein_id=WP_003899961.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3545581 3546603 . - . ID=gene-AL42_RS21680;Name=AL42_RS21680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21680;old_locus_tag=AL42_03315 NZ_KK316784.1 Protein Homology CDS 3545581 3546603 . - 0 ID=cds-WP_003416799.1;Parent=gene-AL42_RS21680;Dbxref=GenBank:WP_003416799.1;Name=WP_003416799.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0005524;gbkey=CDS;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217710.1;locus_tag=AL42_RS21680;product=YlbL family protein;protein_id=WP_003416799.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3546681 3548099 . + . ID=gene-AL42_RS21685;Name=AL42_RS21685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21685;old_locus_tag=AL42_03316 NZ_KK316784.1 Protein Homology CDS 3546681 3548099 . + 0 ID=cds-WP_003416804.1;Parent=gene-AL42_RS21685;Dbxref=GenBank:WP_003416804.1;Name=WP_003416804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217711.1;locus_tag=AL42_RS21685;product=zinc-dependent metalloprotease;protein_id=WP_003416804.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3548138 3549004 . + . ID=gene-AL42_RS21690;Name=AL42_RS21690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21690;old_locus_tag=AL42_03317 NZ_KK316784.1 Protein Homology CDS 3548138 3549004 . + 0 ID=cds-WP_021082912.1;Parent=gene-AL42_RS21690;Dbxref=GenBank:WP_021082912.1;Name=WP_021082912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014383154.1;locus_tag=AL42_RS21690;product=hypothetical protein;protein_id=WP_021082912.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3549013 3549186 . - . ID=gene-AL42_RS21695;Name=AL42_RS21695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21695;old_locus_tag=AL42_03318 NZ_KK316784.1 Protein Homology CDS 3549013 3549186 . - 0 ID=cds-WP_015456486.1;Parent=gene-AL42_RS21695;Dbxref=GenBank:WP_015456486.1;Name=WP_015456486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012393233.1;locus_tag=AL42_RS21695;product=hypothetical protein;protein_id=WP_015456486.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3549341 3550684 . + . ID=gene-AL42_RS21700;Name=AL42_RS21700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21700;old_locus_tag=AL42_03319 NZ_KK316784.1 Protein Homology CDS 3549341 3550684 . + 0 ID=cds-WP_003416815.1;Parent=gene-AL42_RS21700;Dbxref=GenBank:WP_003416815.1;Name=WP_003416815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217713.1;locus_tag=AL42_RS21700;product=macrolide-binding ATPase MABP-1;protein_id=WP_003416815.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3550718 3550996 . - . ID=gene-AL42_RS21705;Name=whiB7;gbkey=Gene;gene=whiB7;gene_biotype=protein_coding;locus_tag=AL42_RS21705;old_locus_tag=AL42_03320 NZ_KK316784.1 Protein Homology CDS 3550718 3550996 . - 0 ID=cds-WP_003899963.1;Parent=gene-AL42_RS21705;Dbxref=GenBank:WP_003899963.1;Name=WP_003899963.1;gbkey=CDS;gene=whiB7;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177940.1;locus_tag=AL42_RS21705;product=transcriptional regulator WhiB7;protein_id=WP_003899963.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3551426 3553528 . - . ID=gene-AL42_RS21710;Name=uvrD2;gbkey=Gene;gene=uvrD2;gene_biotype=protein_coding;locus_tag=AL42_RS21710;old_locus_tag=AL42_03321 NZ_KK316784.1 Protein Homology CDS 3551426 3553528 . - 0 ID=cds-WP_003416822.1;Parent=gene-AL42_RS21710;Dbxref=GenBank:WP_003416822.1;Name=WP_003416822.1;gbkey=CDS;gene=uvrD2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217714.1;locus_tag=AL42_RS21710;product=ATP-dependent DNA helicase UvrD2;protein_id=WP_003416822.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3553652 3553906 . + . ID=gene-AL42_RS21715;Name=mrx1;gbkey=Gene;gene=mrx1;gene_biotype=protein_coding;locus_tag=AL42_RS21715;old_locus_tag=AL42_03322 NZ_KK316784.1 Protein Homology CDS 3553652 3553906 . + 0 ID=cds-WP_003416827.1;Parent=gene-AL42_RS21715;Dbxref=GenBank:WP_003416827.1;Name=WP_003416827.1;gbkey=CDS;gene=mrx1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177941.1;locus_tag=AL42_RS21715;product=mycoredoxin Mrx1;protein_id=WP_003416827.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3553919 3554860 . - . ID=gene-AL42_RS21720;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=AL42_RS21720;old_locus_tag=AL42_03323 NZ_KK316784.1 Protein Homology CDS 3553919 3554860 . - 0 ID=cds-WP_003906027.1;Parent=gene-AL42_RS21720;Dbxref=GenBank:WP_003906027.1;Name=WP_003906027.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217715.1;locus_tag=AL42_RS21720;product=NAD(+) diphosphatase;protein_id=WP_003906027.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3554919 3555986 . - . ID=gene-AL42_RS21725;Name=AL42_RS21725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21725;old_locus_tag=AL42_03324 NZ_KK316784.1 Protein Homology CDS 3554919 3555986 . - 0 ID=cds-WP_003899966.1;Parent=gene-AL42_RS21725;Dbxref=GenBank:WP_003899966.1;Name=WP_003899966.1;Ontology_term=GO:0030001,GO:0034220,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=metal ion transport|0030001||IEA,monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217716.1;locus_tag=AL42_RS21725;product=potassium channel family protein;protein_id=WP_003899966.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3556048 3559353 . - . ID=gene-AL42_RS21730;Name=adnB;gbkey=Gene;gene=adnB;gene_biotype=protein_coding;locus_tag=AL42_RS21730;old_locus_tag=AL42_03325 NZ_KK316784.1 Protein Homology CDS 3556048 3559353 . - 0 ID=cds-WP_003910809.1;Parent=gene-AL42_RS21730;Dbxref=GenBank:WP_003910809.1;Name=WP_003910809.1;gbkey=CDS;gene=adnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217717.1;locus_tag=AL42_RS21730;product=ATP-dependent DNA helicase AdnB;protein_id=WP_003910809.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3559350 3562517 . - . ID=gene-AL42_RS21735;Name=adnA;gbkey=Gene;gene=adnA;gene_biotype=protein_coding;locus_tag=AL42_RS21735;old_locus_tag=AL42_03326 NZ_KK316784.1 Protein Homology CDS 3559350 3562517 . - 0 ID=cds-WP_003901568.1;Parent=gene-AL42_RS21735;Dbxref=GenBank:WP_003901568.1;Name=WP_003901568.1;gbkey=CDS;gene=adnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217718.1;locus_tag=AL42_RS21735;product=ATP-dependent DNA helicase AdnA;protein_id=WP_003901568.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3562603 3562812 . + . ID=gene-AL42_RS21740;Name=AL42_RS21740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21740;old_locus_tag=AL42_03327 NZ_KK316784.1 Protein Homology CDS 3562603 3562812 . + 0 ID=cds-WP_003907005.1;Parent=gene-AL42_RS21740;Dbxref=GenBank:WP_003907005.1;Name=WP_003907005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030044.1;locus_tag=AL42_RS21740;product=hypothetical protein;protein_id=WP_003907005.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3562843 3563628 . + . ID=gene-AL42_RS21745;Name=lipV;gbkey=Gene;gene=lipV;gene_biotype=protein_coding;locus_tag=AL42_RS21745;old_locus_tag=AL42_03328 NZ_KK316784.1 Protein Homology CDS 3562843 3563628 . + 0 ID=cds-WP_003899968.1;Parent=gene-AL42_RS21745;Dbxref=GenBank:WP_003899968.1;Name=WP_003899968.1;gbkey=CDS;gene=lipV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899968.1;locus_tag=AL42_RS21745;product=lipase LipV;protein_id=WP_003899968.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3563631 3563936 . + . ID=gene-AL42_RS21750;Name=AL42_RS21750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21750;old_locus_tag=AL42_03329 NZ_KK316784.1 Protein Homology CDS 3563631 3563936 . + 0 ID=cds-WP_003416847.1;Parent=gene-AL42_RS21750;Dbxref=GenBank:WP_003416847.1;Name=WP_003416847.1;Ontology_term=GO:0006281,GO:0003677,GO:0003824,GO:0003908;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217720.1;locus_tag=AL42_RS21750;product=MGMT family protein;protein_id=WP_003416847.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3563943 3564797 . - . ID=gene-AL42_RS21755;Name=AL42_RS21755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21755;old_locus_tag=AL42_03330 NZ_KK316784.1 Protein Homology CDS 3563943 3564797 . - 0 ID=cds-WP_003416850.1;Parent=gene-AL42_RS21755;Dbxref=GenBank:WP_003416850.1;Name=WP_003416850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014712234.1;locus_tag=AL42_RS21755;product=TIGR02569 family protein;protein_id=WP_003416850.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3564848 3566026 . - . ID=gene-AL42_RS21760;Name=moeZ;gbkey=Gene;gene=moeZ;gene_biotype=protein_coding;locus_tag=AL42_RS21760;old_locus_tag=AL42_03331 NZ_KK316784.1 Protein Homology CDS 3564848 3566026 . - 0 ID=cds-WP_003416855.1;Parent=gene-AL42_RS21760;Dbxref=GenBank:WP_003416855.1;Name=WP_003416855.1;Ontology_term=GO:0008641;gbkey=CDS;gene=moeZ;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177942.1;locus_tag=AL42_RS21760;product=adenylyltransferase/sulfurtransferase MoeZ;protein_id=WP_003416855.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3566117 3567145 . - . ID=gene-AL42_RS21765;Name=AL42_RS21765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21765;old_locus_tag=AL42_03332 NZ_KK316784.1 Protein Homology CDS 3566117 3567145 . - 0 ID=cds-WP_003899970.1;Parent=gene-AL42_RS21765;Dbxref=GenBank:WP_003899970.1;Name=WP_003899970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899970.1;locus_tag=AL42_RS21765;product=DUF3152 domain-containing protein;protein_id=WP_003899970.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3567320 3568006 . + . ID=gene-AL42_RS21770;Name=AL42_RS21770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21770;old_locus_tag=AL42_03333 NZ_KK316784.1 Protein Homology CDS 3567320 3568006 . + 0 ID=cds-WP_003416861.1;Parent=gene-AL42_RS21770;Dbxref=GenBank:WP_003416861.1;Name=WP_003416861.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217724.1;locus_tag=AL42_RS21770;product=HTH-type transcriptional activator FasR;protein_id=WP_003416861.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3567993 3568265 . - . ID=gene-AL42_RS21775;Name=AL42_RS21775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21775;old_locus_tag=AL42_03334 NZ_KK316784.1 Protein Homology CDS 3567993 3568265 . - 0 ID=cds-WP_003416863.1;Parent=gene-AL42_RS21775;Dbxref=GenBank:WP_003416863.1;Name=WP_003416863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177943.1;locus_tag=AL42_RS21775;product=DUF3107 domain-containing protein;protein_id=WP_003416863.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3568590 3569150 . + . ID=gene-AL42_RS21780;Name=AL42_RS21780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21780;old_locus_tag=AL42_03335 NZ_KK316784.1 Protein Homology CDS 3568590 3569150 . + 0 ID=cds-WP_003416868.1;Parent=gene-AL42_RS21780;Dbxref=GenBank:WP_003416868.1;Name=WP_003416868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217725.1;locus_tag=AL42_RS21780;product=MmpS family transport accessory protein;protein_id=WP_003416868.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3569160 3569855 . - . ID=gene-AL42_RS21785;Name=AL42_RS21785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21785;old_locus_tag=AL42_03336 NZ_KK316784.1 Protein Homology CDS 3569160 3569855 . - 0 ID=cds-WP_003416873.1;Parent=gene-AL42_RS21785;Dbxref=GenBank:WP_003416873.1;Name=WP_003416873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217726.1;locus_tag=AL42_RS21785;product=ferritin-like fold-containing protein;protein_id=WP_003416873.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3570114 3571697 . + . ID=gene-AL42_RS21790;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=AL42_RS21790;old_locus_tag=AL42_03337 NZ_KK316784.1 Protein Homology CDS 3570114 3571697 . + 0 ID=cds-WP_003416875.1;Parent=gene-AL42_RS21790;Dbxref=GenBank:WP_003416875.1;Name=WP_003416875.1;Ontology_term=GO:0003676,GO:0005524,GO:0016887;gbkey=CDS;gene=rhlE;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217727.1;locus_tag=AL42_RS21790;product=DEAD/DEAH box helicase;protein_id=WP_003416875.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3571710 3572933 . + . ID=gene-AL42_RS21795;Name=AL42_RS21795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21795;old_locus_tag=AL42_03338 NZ_KK316784.1 Protein Homology CDS 3571710 3572933 . + 0 ID=cds-WP_003416876.1;Parent=gene-AL42_RS21795;Dbxref=GenBank:WP_003416876.1;Name=WP_003416876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217728.1;locus_tag=AL42_RS21795;product=Rv3212 family protein;protein_id=WP_003416876.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3573009 3573809 . - . ID=gene-AL42_RS21800;Name=AL42_RS21800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21800;old_locus_tag=AL42_03339 NZ_KK316784.1 Protein Homology CDS 3573009 3573809 . - 0 ID=cds-WP_003901572.1;Parent=gene-AL42_RS21800;Dbxref=GenBank:WP_003901572.1;Name=WP_003901572.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217729.1;locus_tag=AL42_RS21800;product=ParA family protein;protein_id=WP_003901572.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3573963 3574574 . + . ID=gene-AL42_RS21805;Name=AL42_RS21805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21805;old_locus_tag=AL42_03340 NZ_KK316784.1 Protein Homology CDS 3573963 3574574 . + 0 ID=cds-WP_003416878.1;Parent=gene-AL42_RS21805;Dbxref=GenBank:WP_003416878.1;Name=WP_003416878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177944.1;locus_tag=AL42_RS21805;product=acid phosphatase;protein_id=WP_003416878.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3574571 3575689 . + . ID=gene-AL42_RS21810;Name=entC;gbkey=Gene;gene=entC;gene_biotype=protein_coding;locus_tag=AL42_RS21810;old_locus_tag=AL42_03341 NZ_KK316784.1 Protein Homology CDS 3574571 3575689 . + 0 ID=cds-WP_003416879.1;Parent=gene-AL42_RS21810;Dbxref=GenBank:WP_003416879.1;Name=WP_003416879.1;Ontology_term=GO:0008909;gbkey=CDS;gene=entC;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217731.1;locus_tag=AL42_RS21810;product=isochorismate synthase;protein_id=WP_003416879.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 3575686 3576169 . + . ID=gene-AL42_RS0105465;Name=AL42_RS0105465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS0105465;old_locus_tag=AL42_03342;pseudo=true NZ_KK316784.1 Protein Homology CDS 3575686 3576169 . + 0 ID=cds-AL42_RS0105465;Parent=gene-AL42_RS0105465;Note=frameshifted;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011725920.1;locus_tag=AL42_RS0105465;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 3576121 3576552 . - . ID=gene-AL42_RS21815;Name=AL42_RS21815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21815;old_locus_tag=AL42_03343 NZ_KK316784.1 Protein Homology CDS 3576121 3576552 . - 0 ID=cds-WP_003416881.1;Parent=gene-AL42_RS21815;Dbxref=GenBank:WP_003416881.1;Name=WP_003416881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217733.1;locus_tag=AL42_RS21815;product=hypothetical protein;protein_id=WP_003416881.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3576785 3577750 . + . ID=gene-AL42_RS21820;Name=AL42_RS21820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21820;old_locus_tag=AL42_03344 NZ_KK316784.1 Protein Homology CDS 3576785 3577750 . + 0 ID=cds-WP_003416883.1;Parent=gene-AL42_RS21820;Dbxref=GenBank:WP_003416883.1;Name=WP_003416883.1;Ontology_term=GO:0008654,GO:0016310,GO:0001727,GO:0005524;gbkey=CDS;go_function=lipid kinase activity|0001727||IEA,ATP binding|0005524||IEA;go_process=phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217734.1;locus_tag=AL42_RS21820;product=diacylglycerol/lipid kinase family protein;protein_id=WP_003416883.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3578030 3578284 . + . ID=gene-AL42_RS21825;Name=whiB1;gbkey=Gene;gene=whiB1;gene_biotype=protein_coding;locus_tag=AL42_RS21825;old_locus_tag=AL42_03345 NZ_KK316784.1 Protein Homology CDS 3578030 3578284 . + 0 ID=cds-WP_003416884.1;Parent=gene-AL42_RS21825;Dbxref=GenBank:WP_003416884.1;Name=WP_003416884.1;gbkey=CDS;gene=whiB1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003416884.1;locus_tag=AL42_RS21825;product=transcriptional regulator WhiB1;protein_id=WP_003416884.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3578346 3579851 . - . ID=gene-AL42_RS21830;Name=AL42_RS21830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21830;old_locus_tag=AL42_03346 NZ_KK316784.1 Protein Homology CDS 3578346 3579851 . - 0 ID=cds-WP_003901574.1;Parent=gene-AL42_RS21830;Dbxref=GenBank:WP_003901574.1;Name=WP_003901574.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217736.1;locus_tag=AL42_RS21830;product=sensor histidine kinase;protein_id=WP_003901574.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3579868 3580083 . - . ID=gene-AL42_RS21835;Name=AL42_RS21835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21835;old_locus_tag=AL42_03347 NZ_KK316784.1 Protein Homology CDS 3579868 3580083 . - 0 ID=cds-WP_003416887.1;Parent=gene-AL42_RS21835;Dbxref=GenBank:WP_003416887.1;Name=WP_003416887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217737.1;locus_tag=AL42_RS21835;product=biotin/lipoyl-binding carrier protein;protein_id=WP_003416887.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3580284 3580358 . + . ID=gene-AL42_RS28195;Name=AL42_RS28195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS28195 NZ_KK316784.1 Protein Homology CDS 3580284 3580358 . + 0 ID=cds-WP_003416889.1;Parent=gene-AL42_RS28195;Dbxref=GenBank:WP_003416889.1;Name=WP_003416889.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_149429506.1;locus_tag=AL42_RS28195;product=50S ribosomal protein bL37;protein_id=WP_003416889.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3580368 3580673 . - . ID=gene-AL42_RS21840;Name=rsrA;gbkey=Gene;gene=rsrA;gene_biotype=protein_coding;locus_tag=AL42_RS21840;old_locus_tag=AL42_03348 NZ_KK316784.1 Protein Homology CDS 3580368 3580673 . - 0 ID=cds-WP_003416891.1;Parent=gene-AL42_RS21840;Dbxref=GenBank:WP_003416891.1;Name=WP_003416891.1;Ontology_term=GO:0045454,GO:0016989;gbkey=CDS;gene=rsrA;go_function=sigma factor antagonist activity|0016989||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177945.1;locus_tag=AL42_RS21840;product=mycothiol system anti-sigma-R factor;protein_id=WP_003416891.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3580670 3581221 . - . ID=gene-AL42_RS21845;Name=AL42_RS21845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21845;old_locus_tag=AL42_03349 NZ_KK316784.1 Protein Homology CDS 3580670 3581221 . - 0 ID=cds-WP_003899976.1;Parent=gene-AL42_RS21845;Dbxref=GenBank:WP_003899976.1;Name=WP_003899976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217738.1;locus_tag=AL42_RS21845;product=hypothetical protein;protein_id=WP_003899976.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3581218 3581868 . - . ID=gene-AL42_RS21850;Name=sigH;gbkey=Gene;gene=sigH;gene_biotype=protein_coding;locus_tag=AL42_RS21850;old_locus_tag=AL42_03350 NZ_KK316784.1 Protein Homology CDS 3581218 3581868 . - 0 ID=cds-WP_003416897.1;Parent=gene-AL42_RS21850;Dbxref=GenBank:WP_003416897.1;Name=WP_003416897.1;gbkey=CDS;gene=sigH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217739.1;locus_tag=AL42_RS21850;product=sigma-70 family RNA polymerase sigma factor SigH;protein_id=WP_003416897.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3582168 3583016 . + . ID=gene-AL42_RS21855;Name=AL42_RS21855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21855;old_locus_tag=AL42_03351 NZ_KK316784.1 Protein Homology CDS 3582168 3583016 . + 0 ID=cds-WP_003416899.1;Parent=gene-AL42_RS21855;Dbxref=GenBank:WP_003416899.1;Name=WP_003416899.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217740.1;locus_tag=AL42_RS21855;product=SDR family oxidoreductase;protein_id=WP_003416899.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3582952 3583140 . + . ID=gene-AL42_RS28045;Name=AL42_RS28045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS28045;old_locus_tag=AL42_03352 NZ_KK316784.1 Protein Homology CDS 3582952 3583140 . + 0 ID=cds-WP_003416901.1;Parent=gene-AL42_RS28045;Dbxref=GenBank:WP_003416901.1;Name=WP_003416901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015294273.1;locus_tag=AL42_RS28045;product=hypothetical protein;protein_id=WP_003416901.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3583118 3583336 . + . ID=gene-AL42_RS21865;Name=AL42_RS21865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21865;old_locus_tag=AL42_03353 NZ_KK316784.1 Protein Homology CDS 3583118 3583336 . + 0 ID=cds-WP_003416902.1;Parent=gene-AL42_RS21865;Dbxref=GenBank:WP_003416902.1;Name=WP_003416902.1;Ontology_term=GO:0002161;gbkey=CDS;go_function=aminoacyl-tRNA deacylase activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003416902.1;locus_tag=AL42_RS21865;product=YbaK/EbsC family protein;protein_id=WP_003416902.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3583333 3584757 . - . ID=gene-AL42_RS21870;Name=AL42_RS21870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21870;old_locus_tag=AL42_03354 NZ_KK316784.1 Protein Homology CDS 3583333 3584757 . - 0 ID=cds-WP_003899979.1;Parent=gene-AL42_RS21870;Dbxref=GenBank:WP_003899979.1;Name=WP_003899979.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217742.1;locus_tag=AL42_RS21870;product=GNAT family N-acetyltransferase;protein_id=WP_003899979.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3584881 3585639 . - . ID=gene-AL42_RS21875;Name=AL42_RS21875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21875;old_locus_tag=AL42_03355 NZ_KK316784.1 Protein Homology CDS 3584881 3585639 . - 0 ID=cds-WP_003416907.1;Parent=gene-AL42_RS21875;Dbxref=GenBank:WP_003416907.1;Name=WP_003416907.1;Ontology_term=GO:0009432,GO:0003697,GO:0008233;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA,peptidase activity|0008233||IEA;go_process=SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217743.1;locus_tag=AL42_RS21875;product=SOS response-associated peptidase;protein_id=WP_003416907.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3585694 3587046 . + . ID=gene-AL42_RS21880;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=AL42_RS21880;old_locus_tag=AL42_03356 NZ_KK316784.1 Protein Homology CDS 3585694 3587046 . + 0 ID=cds-WP_003416914.1;Parent=gene-AL42_RS21880;Dbxref=GenBank:WP_003416914.1;Name=WP_003416914.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217744.1;locus_tag=AL42_RS21880;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_003416914.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3587043 3588035 . + . ID=gene-AL42_RS21885;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=AL42_RS21885;old_locus_tag=AL42_03357 NZ_KK316784.1 Protein Homology CDS 3587043 3588035 . + 0 ID=cds-WP_003416916.1;Parent=gene-AL42_RS21885;Dbxref=GenBank:WP_003416916.1;Name=WP_003416916.1;Ontology_term=GO:0006412,GO:0003924,GO:0005525,GO:0043022;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217745.1;locus_tag=AL42_RS21885;product=ribosome small subunit-dependent GTPase A;protein_id=WP_003416916.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3588068 3589351 . - . ID=gene-AL42_RS21890;Name=desA3;gbkey=Gene;gene=desA3;gene_biotype=protein_coding;locus_tag=AL42_RS21890;old_locus_tag=AL42_03358 NZ_KK316784.1 Protein Homology CDS 3588068 3589351 . - 0 ID=cds-WP_003416919.1;Parent=gene-AL42_RS21890;Dbxref=GenBank:WP_003416919.1;Name=WP_003416919.1;gbkey=CDS;gene=desA3;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177948.1;locus_tag=AL42_RS21890;product=NADPH-dependent stearoyl-CoA 9-desaturase;protein_id=WP_003416919.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3589429 3590571 . - . ID=gene-AL42_RS21895;Name=AL42_RS21895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21895;old_locus_tag=AL42_03359 NZ_KK316784.1 Protein Homology CDS 3589429 3590571 . - 0 ID=cds-WP_003416922.1;Parent=gene-AL42_RS21895;Dbxref=GenBank:WP_003416922.1;Name=WP_003416922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217747.1;locus_tag=AL42_RS21895;product=NADPH oxidoreductase;protein_id=WP_003416922.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3590681 3591190 . - . ID=gene-AL42_RS21900;Name=AL42_RS21900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21900;old_locus_tag=AL42_03360 NZ_KK316784.1 Protein Homology CDS 3590681 3591190 . - 0 ID=cds-WP_003416925.1;Parent=gene-AL42_RS21900;Dbxref=GenBank:WP_003416925.1;Name=WP_003416925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217748.1;locus_tag=AL42_RS21900;product=DUF6912 family protein;protein_id=WP_003416925.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3591187 3592053 . - . ID=gene-AL42_RS21905;Name=ppk2;gbkey=Gene;gene=ppk2;gene_biotype=protein_coding;locus_tag=AL42_RS21905;old_locus_tag=AL42_03361 NZ_KK316784.1 Protein Homology CDS 3591187 3592053 . - 0 ID=cds-WP_009938021.1;Parent=gene-AL42_RS21905;Dbxref=GenBank:WP_009938021.1;Name=WP_009938021.1;Ontology_term=GO:0006793,GO:0008976;gbkey=CDS;gene=ppk2;go_function=polyphosphate kinase activity|0008976||IEA;go_process=phosphorus metabolic process|0006793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020788356.1;locus_tag=AL42_RS21905;product=polyphosphate kinase 2;protein_id=WP_009938021.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3592098 3593507 . - . ID=gene-AL42_RS0105480;Name=AL42_RS0105480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0105480 NZ_KK316784.1 Protein Homology CDS 3592098 3593507 . - 0 ID=cds-WP_031721833.1;Parent=gene-AL42_RS0105480;Dbxref=GenBank:WP_031721833.1;Name=WP_031721833.1;Ontology_term=GO:0045017,GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;go_process=glycerolipid biosynthetic process|0045017||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014001636.1;locus_tag=AL42_RS0105480;product=WS/DGAT/MGAT family O-acyltransferase;protein_id=WP_031721833.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3593708 3594259 . + . ID=gene-AL42_RS21910;Name=AL42_RS21910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21910;old_locus_tag=AL42_03364 NZ_KK316784.1 Protein Homology CDS 3593708 3594259 . + 0 ID=cds-WP_003912151.1;Parent=gene-AL42_RS21910;Dbxref=GenBank:WP_003912151.1;Name=WP_003912151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015291303.1;locus_tag=AL42_RS21910;product=Rv3235 family protein;protein_id=WP_003912151.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3594277 3595434 . - . ID=gene-AL42_RS21915;Name=AL42_RS21915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21915;old_locus_tag=AL42_03365 NZ_KK316784.1 Protein Homology CDS 3594277 3595434 . - 0 ID=cds-WP_003902432.1;Parent=gene-AL42_RS21915;Dbxref=GenBank:WP_003902432.1;Name=WP_003902432.1;Ontology_term=GO:0006812,GO:1902600,GO:0015078,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177949.1;locus_tag=AL42_RS21915;product=cation:proton antiporter;protein_id=WP_003902432.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3595439 3595921 . - . ID=gene-AL42_RS21920;Name=AL42_RS21920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21920;old_locus_tag=AL42_03366 NZ_KK316784.1 Protein Homology CDS 3595439 3595921 . - 0 ID=cds-WP_003899982.1;Parent=gene-AL42_RS21920;Dbxref=GenBank:WP_003899982.1;Name=WP_003899982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217754.1;locus_tag=AL42_RS21920;product=cation:proton antiporter regulatory subunit;protein_id=WP_003899982.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3595982 3596716 . - . ID=gene-AL42_RS21925;Name=mddA;gbkey=Gene;gene=mddA;gene_biotype=protein_coding;locus_tag=AL42_RS21925;old_locus_tag=AL42_03367 NZ_KK316784.1 Protein Homology CDS 3595982 3596716 . - 0 ID=cds-WP_003416945.1;Parent=gene-AL42_RS21925;Dbxref=GenBank:WP_003416945.1;Name=WP_003416945.1;Ontology_term=GO:0008168;gbkey=CDS;gene=mddA;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217755.1;locus_tag=AL42_RS21925;product=methanethiol S-methyltransferase;protein_id=WP_003416945.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3596775 3599921 . - . ID=gene-AL42_RS21930;Name=AL42_RS21930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21930;old_locus_tag=AL42_03368 NZ_KK316784.1 Protein Homology CDS 3596775 3599921 . - 0 ID=cds-WP_003900661.1;Parent=gene-AL42_RS21930;Dbxref=GenBank:WP_003900661.1;Name=WP_003900661.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217756.1;locus_tag=AL42_RS21930;product=MFS transporter;protein_id=WP_003900661.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3600000 3602849 . - . ID=gene-AL42_RS21935;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=AL42_RS21935;old_locus_tag=AL42_03369 NZ_KK316784.1 Protein Homology CDS 3600000 3602849 . - 0 ID=cds-WP_003901576.1;Parent=gene-AL42_RS21935;Dbxref=GenBank:WP_003901576.1;Name=WP_003901576.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177950.1;locus_tag=AL42_RS21935;product=preprotein translocase subunit SecA;protein_id=WP_003901576.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3602928 3603572 . - . ID=gene-AL42_RS21940;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=AL42_RS21940;old_locus_tag=AL42_03370 NZ_KK316784.1 Protein Homology CDS 3602928 3603572 . - 0 ID=cds-WP_003416957.1;Parent=gene-AL42_RS21940;Dbxref=GenBank:WP_003416957.1;Name=WP_003416957.1;Ontology_term=GO:0045182,GO:0005840;gbkey=CDS;gene=hpf;go_component=ribosome|0005840||IEA;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217758.3;locus_tag=AL42_RS21940;product=ribosome hibernation-promoting factor%2C HPF/YfiA family;protein_id=WP_003416957.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3603888 3604529 . - . ID=gene-AL42_RS21945;Name=AL42_RS21945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS21945;old_locus_tag=AL42_03371 NZ_KK316784.1 Protein Homology CDS 3603888 3604529 . - 0 ID=cds-WP_003416963.1;Parent=gene-AL42_RS21945;Dbxref=GenBank:WP_003416963.1;Name=WP_003416963.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217759.1;locus_tag=AL42_RS21945;product=ComF family protein;protein_id=WP_003416963.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 3604567 3605408 . - . ID=gene-AL42_RS21950;Name=AL42_RS21950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS21950;old_locus_tag=AL42_03372;pseudo=true NZ_KK316784.1 Protein Homology CDS 3604567 3605408 . - 0 ID=cds-AL42_RS21950;Parent=gene-AL42_RS21950;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217760.1;locus_tag=AL42_RS21950;product=hypothetical protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 3605476 3607227 . - . ID=gene-AL42_RS21955;Name=lpqB;gbkey=Gene;gene=lpqB;gene_biotype=protein_coding;locus_tag=AL42_RS21955;old_locus_tag=AL42_03373 NZ_KK316784.1 Protein Homology CDS 3605476 3607227 . - 0 ID=cds-WP_003901578.1;Parent=gene-AL42_RS21955;Dbxref=GenBank:WP_003901578.1;Name=WP_003901578.1;gbkey=CDS;gene=lpqB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217761.1;locus_tag=AL42_RS21955;product=MtrAB system accessory lipoprotein LpqB;protein_id=WP_003901578.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3607227 3608930 . - . ID=gene-AL42_RS21960;Name=mtrB;gbkey=Gene;gene=mtrB;gene_biotype=protein_coding;locus_tag=AL42_RS21960;old_locus_tag=AL42_03374 NZ_KK316784.1 Protein Homology CDS 3607227 3608930 . - 0 ID=cds-WP_003906038.1;Parent=gene-AL42_RS21960;Dbxref=GenBank:WP_003906038.1;Name=WP_003906038.1;gbkey=CDS;gene=mtrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217762.1;locus_tag=AL42_RS21960;product=two-component system sensor histidine kinase MtrB;protein_id=WP_003906038.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3608980 3609666 . - . ID=gene-AL42_RS21965;Name=mtrA;gbkey=Gene;gene=mtrA;gene_biotype=protein_coding;locus_tag=AL42_RS21965;old_locus_tag=AL42_03375 NZ_KK316784.1 Protein Homology CDS 3608980 3609666 . - 0 ID=cds-WP_003899985.1;Parent=gene-AL42_RS21965;Dbxref=GenBank:WP_003899985.1;Name=WP_003899985.1;gbkey=CDS;gene=mtrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217763.1;locus_tag=AL42_RS21965;product=two-component system response regulator MtrA;protein_id=WP_003899985.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 3609736 3610386 . - . ID=gene-AL42_RS21970;Name=tmk;end_range=3610386,.;gbkey=Gene;gene=tmk;gene_biotype=pseudogene;locus_tag=AL42_RS21970;old_locus_tag=AL42_03376;partial=true;pseudo=true NZ_KK316784.1 Protein Homology CDS 3609736 3610386 . - 0 ID=cds-AL42_RS21970;Parent=gene-AL42_RS21970;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006233,GO:0004798,GO:0005524;end_range=3610386,.;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217764.1;locus_tag=AL42_RS21970;partial=true;product=dTMP kinase;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 3610477 3611964 . - . ID=gene-AL42_RS21975;Name=ahcY;gbkey=Gene;gene=ahcY;gene_biotype=protein_coding;locus_tag=AL42_RS21975;old_locus_tag=AL42_03377 NZ_KK316784.1 Protein Homology CDS 3610477 3611964 . - 0 ID=cds-WP_003417039.1;Parent=gene-AL42_RS21975;Dbxref=GenBank:WP_003417039.1;Name=WP_003417039.1;Ontology_term=GO:0006730,GO:0004013;gbkey=CDS;gene=ahcY;go_function=adenosylhomocysteinase activity|0004013||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217765.1;locus_tag=AL42_RS21975;product=adenosylhomocysteinase;protein_id=WP_003417039.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3612069 3612704 . - . ID=gene-AL42_RS21980;Name=alkX;gbkey=Gene;gene=alkX;gene_biotype=protein_coding;locus_tag=AL42_RS21980;old_locus_tag=AL42_03378 NZ_KK316784.1 Protein Homology CDS 3612069 3612704 . - 0 ID=cds-WP_003417042.1;Parent=gene-AL42_RS21980;Dbxref=GenBank:WP_003417042.1;Name=WP_003417042.1;gbkey=CDS;gene=alkX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217766.1;locus_tag=AL42_RS21980;product=TetR family transcriptional regulator AlkX;protein_id=WP_003417042.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3612701 3612883 . - . ID=gene-AL42_RS21985;Name=rubB;gbkey=Gene;gene=rubB;gene_biotype=protein_coding;locus_tag=AL42_RS21985;old_locus_tag=AL42_03379 NZ_KK316784.1 Protein Homology CDS 3612701 3612883 . - 0 ID=cds-WP_003417044.1;Parent=gene-AL42_RS21985;Dbxref=GenBank:WP_003417044.1;Name=WP_003417044.1;gbkey=CDS;gene=rubB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217767.1;locus_tag=AL42_RS21985;product=rubredoxin RubB;protein_id=WP_003417044.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3612888 3613055 . - . ID=gene-AL42_RS21990;Name=rubA;gbkey=Gene;gene=rubA;gene_biotype=protein_coding;locus_tag=AL42_RS21990;old_locus_tag=AL42_03380 NZ_KK316784.1 Protein Homology CDS 3612888 3613055 . - 0 ID=cds-WP_003417045.1;Parent=gene-AL42_RS21990;Dbxref=GenBank:WP_003417045.1;Name=WP_003417045.1;Ontology_term=GO:0043448,GO:0005506,GO:0009055;gbkey=CDS;gene=rubA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=alkane catabolic process|0043448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217768.1;locus_tag=AL42_RS21990;product=rubredoxin;protein_id=WP_003417045.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3613055 3614305 . - . ID=gene-AL42_RS21995;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=protein_coding;locus_tag=AL42_RS21995;old_locus_tag=AL42_03381 NZ_KK316784.1 Protein Homology CDS 3613055 3614305 . - 0 ID=cds-WP_003417047.1;Parent=gene-AL42_RS21995;Dbxref=GenBank:WP_003417047.1;Name=WP_003417047.1;Ontology_term=GO:0016491;gbkey=CDS;gene=alkB;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217769.1;locus_tag=AL42_RS21995;product=alkane 1-monooxygenase;protein_id=WP_003417047.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3614414 3615901 . - . ID=gene-AL42_RS22000;Name=AL42_RS22000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22000;old_locus_tag=AL42_03382 NZ_KK316784.1 Protein Homology CDS 3614414 3615901 . - 0 ID=cds-WP_003417049.1;Parent=gene-AL42_RS22000;Dbxref=GenBank:WP_003417049.1;Name=WP_003417049.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217770.1;locus_tag=AL42_RS22000;product=amino acid permease;protein_id=WP_003417049.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3615992 3617380 . + . ID=gene-AL42_RS22005;Name=AL42_RS22005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22005;old_locus_tag=AL42_03383 NZ_KK316784.1 Protein Homology CDS 3615992 3617380 . + 0 ID=cds-WP_003417051.1;Parent=gene-AL42_RS22005;Dbxref=GenBank:WP_003417051.1;Name=WP_003417051.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217771.1;locus_tag=AL42_RS22005;product=FAD-dependent oxidoreductase;protein_id=WP_003417051.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3617358 3618584 . - . ID=gene-AL42_RS22010;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=AL42_RS22010;old_locus_tag=AL42_03384 NZ_KK316784.1 Protein Homology CDS 3617358 3618584 . - 0 ID=cds-WP_003417054.1;Parent=gene-AL42_RS22010;Dbxref=GenBank:WP_003417054.1;Name=WP_003417054.1;Ontology_term=GO:0005975,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217772.1;locus_tag=AL42_RS22010;product=mannose-6-phosphate isomerase%2C class I;protein_id=WP_003417054.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3618592 3619632 . - . ID=gene-AL42_RS22015;Name=AL42_RS22015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22015;old_locus_tag=AL42_03385 NZ_KK316784.1 Protein Homology CDS 3618592 3619632 . - 0 ID=cds-WP_003417056.1;Parent=gene-AL42_RS22015;Dbxref=GenBank:WP_003417056.1;Name=WP_003417056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217773.1;locus_tag=AL42_RS22015;product=hypothetical protein;protein_id=WP_003417056.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3619629 3621026 . - . ID=gene-AL42_RS22020;Name=pmmA;gbkey=Gene;gene=pmmA;gene_biotype=protein_coding;locus_tag=AL42_RS22020;old_locus_tag=AL42_03386 NZ_KK316784.1 Protein Homology CDS 3619629 3621026 . - 0 ID=cds-WP_003901581.1;Parent=gene-AL42_RS22020;Dbxref=GenBank:WP_003901581.1;Name=WP_003901581.1;Ontology_term=GO:0005975,GO:0016868;gbkey=CDS;gene=pmmA;go_function=intramolecular phosphotransferase activity|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217774.1;locus_tag=AL42_RS22020;product=phosphomannomutase/phosphoglucomutase;protein_id=WP_003901581.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3621128 3621568 . - . ID=gene-AL42_RS22025;Name=AL42_RS22025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22025;old_locus_tag=AL42_03387 NZ_KK316784.1 Protein Homology CDS 3621128 3621568 . - 0 ID=cds-WP_180744027.1;Parent=gene-AL42_RS22025;Dbxref=GenBank:WP_180744027.1;Name=WP_180744027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014208879.1;locus_tag=AL42_RS22025;product=DUF3499 domain-containing protein;protein_id=WP_180744027.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3621742 3622161 . + . ID=gene-AL42_RS22030;Name=AL42_RS22030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22030;old_locus_tag=AL42_03388 NZ_KK316784.1 Protein Homology CDS 3621742 3622161 . + 0 ID=cds-WP_003417076.1;Parent=gene-AL42_RS22030;Dbxref=GenBank:WP_003417076.1;Name=WP_003417076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217776.1;locus_tag=AL42_RS22030;product=metallopeptidase family protein;protein_id=WP_003417076.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3622189 3622533 . - . ID=gene-AL42_RS0105485;Name=AL42_RS0105485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0105485;old_locus_tag=AL42_03389 NZ_KK316784.1 Protein Homology CDS 3622189 3622533 . - 0 ID=cds-WP_003900662.1;Parent=gene-AL42_RS0105485;Dbxref=GenBank:WP_003900662.1;Name=WP_003900662.1;Ontology_term=GO:0003677,GO:0046872,GO:0051536,GO:0051539;gbkey=CDS;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011725952.1;locus_tag=AL42_RS0105485;product=WhiB family transcriptional regulator;protein_id=WP_003900662.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3622860 3623855 . + . ID=gene-AL42_RS22035;Name=cofD;gbkey=Gene;gene=cofD;gene_biotype=protein_coding;locus_tag=AL42_RS22035;old_locus_tag=AL42_03390 NZ_KK316784.1 Protein Homology CDS 3622860 3623855 . + 0 ID=cds-WP_003417087.1;Parent=gene-AL42_RS22035;Dbxref=GenBank:WP_003417087.1;Name=WP_003417087.1;Ontology_term=GO:0000287,GO:0043743;gbkey=CDS;gene=cofD;go_function=magnesium ion binding|0000287||IEA,LPPG:FO 2-phospho-L-lactate transferase activity|0043743||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217778.1;locus_tag=AL42_RS22035;product=2-phospho-L-lactate transferase;protein_id=WP_003417087.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3623852 3625198 . + . ID=gene-AL42_RS22040;Name=fbiB;gbkey=Gene;gene=fbiB;gene_biotype=protein_coding;locus_tag=AL42_RS22040;old_locus_tag=AL42_03391 NZ_KK316784.1 Protein Homology CDS 3623852 3625198 . + 0 ID=cds-WP_003900663.1;Parent=gene-AL42_RS22040;Dbxref=GenBank:WP_003900663.1;Name=WP_003900663.1;Ontology_term=GO:0043773,GO:0046872;gbkey=CDS;gene=fbiB;go_function=coenzyme F420-0 gamma-glutamyl ligase activity|0043773||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217779.1;locus_tag=AL42_RS22040;product=coenzyme F420-0:L-glutamate ligase;protein_id=WP_003900663.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3625494 3627155 . + . ID=gene-AL42_RS22045;Name=AL42_RS22045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22045;old_locus_tag=AL42_03392 NZ_KK316784.1 Protein Homology CDS 3625494 3627155 . + 0 ID=cds-WP_003902435.1;Parent=gene-AL42_RS22045;Dbxref=GenBank:WP_003902435.1;Name=WP_003902435.1;Ontology_term=GO:0006304,GO:0003677,GO:0003824;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217780.1;locus_tag=AL42_RS22045;product=Eco57I restriction-modification methylase domain-containing protein;protein_id=WP_003902435.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3627215 3628294 . - . ID=gene-AL42_RS22050;Name=manB;gbkey=Gene;gene=manB;gene_biotype=protein_coding;locus_tag=AL42_RS22050;old_locus_tag=AL42_03393 NZ_KK316784.1 Protein Homology CDS 3627215 3628294 . - 0 ID=cds-WP_003417097.1;Parent=gene-AL42_RS22050;Dbxref=GenBank:WP_003417097.1;Name=WP_003417097.1;Ontology_term=GO:0009058,GO:0016779;gbkey=CDS;gene=manB;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177951.1;locus_tag=AL42_RS22050;product=mannose-1-phosphate guanylyltransferase;protein_id=WP_003417097.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3628296 3629201 . - . ID=gene-AL42_RS22055;Name=wbbL;gbkey=Gene;gene=wbbL;gene_biotype=protein_coding;locus_tag=AL42_RS22055;old_locus_tag=AL42_03394 NZ_KK316784.1 Protein Homology CDS 3628296 3629201 . - 0 ID=cds-WP_003901582.1;Parent=gene-AL42_RS22055;Dbxref=GenBank:WP_003901582.1;Name=WP_003901582.1;gbkey=CDS;gene=wbbL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177952.3;locus_tag=AL42_RS22055;product=N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase;protein_id=WP_003901582.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3629212 3630126 . - . ID=gene-AL42_RS22060;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=AL42_RS22060;old_locus_tag=AL42_03395 NZ_KK316784.1 Protein Homology CDS 3629212 3630126 . - 0 ID=cds-WP_003899993.1;Parent=gene-AL42_RS22060;Dbxref=GenBank:WP_003899993.1;Name=WP_003899993.1;Ontology_term=GO:0009243,GO:0019305,GO:0008831;gbkey=CDS;gene=rfbD;go_function=dTDP-4-dehydrorhamnose reductase activity|0008831||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217783.1;locus_tag=AL42_RS22060;product=dTDP-4-dehydrorhamnose reductase;protein_id=WP_003899993.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3630202 3631698 . + . ID=gene-AL42_RS22065;Name=lcp1;gbkey=Gene;gene=lcp1;gene_biotype=protein_coding;locus_tag=AL42_RS22065;old_locus_tag=AL42_03396 NZ_KK316784.1 Protein Homology CDS 3630202 3631698 . + 0 ID=cds-WP_003417107.1;Parent=gene-AL42_RS22065;Dbxref=GenBank:WP_003417107.1;Name=WP_003417107.1;gbkey=CDS;gene=lcp1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217784.1;locus_tag=AL42_RS22065;product=arabinogalactan--peptidoglycan phosphotransferase Lcp1;protein_id=WP_003417107.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3631686 3632426 . + . ID=gene-AL42_RS22070;Name=AL42_RS22070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22070;old_locus_tag=AL42_03397 NZ_KK316784.1 Protein Homology CDS 3631686 3632426 . + 0 ID=cds-WP_003899994.1;Parent=gene-AL42_RS22070;Dbxref=GenBank:WP_003899994.1;Name=WP_003899994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899994.1;locus_tag=AL42_RS22070;product=TIGR03089 family protein;protein_id=WP_003899994.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3632551 3632832 . + . ID=gene-AL42_RS22075;Name=AL42_RS22075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22075;old_locus_tag=AL42_03398 NZ_KK316784.1 Protein Homology CDS 3632551 3632832 . + 0 ID=cds-WP_003417115.1;Parent=gene-AL42_RS22075;Dbxref=GenBank:WP_003417115.1;Name=WP_003417115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217786.1;locus_tag=AL42_RS22075;product=DUF1490 family protein;protein_id=WP_003417115.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3632843 3634999 . + . ID=gene-AL42_RS22080;Name=ctpC;gbkey=Gene;gene=ctpC;gene_biotype=protein_coding;locus_tag=AL42_RS22080;old_locus_tag=AL42_03399 NZ_KK316784.1 Protein Homology CDS 3632843 3634999 . + 0 ID=cds-WP_003899995.1;Parent=gene-AL42_RS22080;Dbxref=GenBank:WP_003899995.1;Name=WP_003899995.1;gbkey=CDS;gene=ctpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217787.1;locus_tag=AL42_RS22080;product=manganese-exporting P-type ATPase CtpC;protein_id=WP_003899995.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3634996 3635664 . - . ID=gene-AL42_RS22085;Name=AL42_RS22085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22085;old_locus_tag=AL42_03400 NZ_KK316784.1 Protein Homology CDS 3634996 3635664 . - 0 ID=cds-WP_003417119.1;Parent=gene-AL42_RS22085;Dbxref=GenBank:WP_003417119.1;Name=WP_003417119.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217788.1;locus_tag=AL42_RS22085;product=cation efflux transmembrane domain-containing protein;protein_id=WP_003417119.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3635765 3636949 . + . ID=gene-AL42_RS22090;Name=AL42_RS22090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22090;old_locus_tag=AL42_03401 NZ_KK316784.1 Protein Homology CDS 3635765 3636949 . + 0 ID=cds-WP_003901586.1;Parent=gene-AL42_RS22090;Dbxref=GenBank:WP_003901586.1;Name=WP_003901586.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217789.1;locus_tag=AL42_RS22090;product=CoA transferase;protein_id=WP_003901586.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3636978 3639248 . + . ID=gene-AL42_RS22095;Name=AL42_RS22095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22095;old_locus_tag=AL42_03402 NZ_KK316784.1 Protein Homology CDS 3636978 3639248 . + 0 ID=cds-WP_003917141.1;Parent=gene-AL42_RS22095;Dbxref=GenBank:WP_003917141.1;Name=WP_003917141.1;Ontology_term=GO:1902358,GO:0015116,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015303796.1;locus_tag=AL42_RS22095;product=SulP family inorganic anion transporter;protein_id=WP_003917141.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3639237 3640406 . - . ID=gene-AL42_RS22100;Name=AL42_RS22100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22100;old_locus_tag=AL42_03403 NZ_KK316784.1 Protein Homology CDS 3639237 3640406 . - 0 ID=cds-WP_003417122.1;Parent=gene-AL42_RS22100;Dbxref=GenBank:WP_003417122.1;Name=WP_003417122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217791.1;locus_tag=AL42_RS22100;product=acyl-CoA dehydrogenase;protein_id=WP_003417122.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3640431 3640955 . - . ID=gene-AL42_RS22105;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=AL42_RS22105;old_locus_tag=AL42_03404 NZ_KK316784.1 Protein Homology CDS 3640431 3640955 . - 0 ID=cds-WP_003899997.1;Parent=gene-AL42_RS22105;Dbxref=GenBank:WP_003899997.1;Name=WP_003899997.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217792.1;locus_tag=AL42_RS22105;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_003899997.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3640952 3642241 . - . ID=gene-AL42_RS22110;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=AL42_RS22110;old_locus_tag=AL42_03405 NZ_KK316784.1 Protein Homology CDS 3640952 3642241 . - 0 ID=cds-WP_003417126.1;Parent=gene-AL42_RS22110;Dbxref=GenBank:WP_003417126.1;Name=WP_003417126.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217793.1;locus_tag=AL42_RS22110;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_003417126.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3642342 3643013 . + . ID=gene-AL42_RS22115;Name=AL42_RS22115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22115;old_locus_tag=AL42_03406 NZ_KK316784.1 Protein Homology CDS 3642342 3643013 . + 0 ID=cds-WP_003417128.1;Parent=gene-AL42_RS22115;Dbxref=GenBank:WP_003417128.1;Name=WP_003417128.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003874529.1;locus_tag=AL42_RS22115;product=GtrA family protein;protein_id=WP_003417128.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3642968 3643486 . - . ID=gene-AL42_RS22120;Name=AL42_RS22120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22120;old_locus_tag=AL42_03407 NZ_KK316784.1 Protein Homology CDS 3642968 3643486 . - 0 ID=cds-WP_003417130.1;Parent=gene-AL42_RS22120;Dbxref=GenBank:WP_003417130.1;Name=WP_003417130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217795.1;locus_tag=AL42_RS22120;product=PH domain-containing protein;protein_id=WP_003417130.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3643529 3644329 . - . ID=gene-AL42_RS22125;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=AL42_RS22125;old_locus_tag=AL42_03408 NZ_KK316784.1 Protein Homology CDS 3643529 3644329 . - 0 ID=cds-WP_003899999.1;Parent=gene-AL42_RS22125;Dbxref=GenBank:WP_003899999.1;Name=WP_003899999.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217796.1;locus_tag=AL42_RS22125;product=biotin--[acetyl-CoA-carboxylase] ligase;protein_id=WP_003899999.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3644379 3646025 . + . ID=gene-AL42_RS22130;Name=AL42_RS22130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22130;old_locus_tag=AL42_03409 NZ_KK316784.1 Protein Homology CDS 3644379 3646025 . + 0 ID=cds-WP_003417136.1;Parent=gene-AL42_RS22130;Dbxref=GenBank:WP_003417136.1;Name=WP_003417136.1;Ontology_term=GO:0006633,GO:0003989,GO:0016874,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,ligase activity|0016874||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217797.1;locus_tag=AL42_RS22130;product=acyl-CoA carboxylase subunit beta;protein_id=WP_003417136.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3646006 3646467 . + . ID=gene-AL42_RS22135;Name=AL42_RS22135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22135;old_locus_tag=AL42_03410 NZ_KK316784.1 Protein Homology CDS 3646006 3646467 . + 0 ID=cds-WP_031653637.1;Parent=gene-AL42_RS22135;Dbxref=GenBank:WP_031653637.1;Name=WP_031653637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217798.1;locus_tag=AL42_RS22135;product=acyl-CoA carboxylase subunit epsilon;protein_id=WP_031653637.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3646464 3647132 . + . ID=gene-AL42_RS22140;Name=AL42_RS22140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22140;old_locus_tag=AL42_03411 NZ_KK316784.1 Protein Homology CDS 3646464 3647132 . + 0 ID=cds-WP_003906045.1;Parent=gene-AL42_RS22140;Dbxref=GenBank:WP_003906045.1;Name=WP_003906045.1;Ontology_term=GO:0009117,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217799.1;locus_tag=AL42_RS22140;product=nucleoside triphosphate pyrophosphatase;protein_id=WP_003906045.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3647173 3648066 . + . ID=gene-AL42_RS22145;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=AL42_RS22145;old_locus_tag=AL42_03412 NZ_KK316784.1 Protein Homology CDS 3647173 3648066 . + 0 ID=cds-WP_003906046.1;Parent=gene-AL42_RS22145;Dbxref=GenBank:WP_003906046.1;Name=WP_003906046.1;Ontology_term=GO:0000098,GO:0016783;gbkey=CDS;gene=sseA;go_function=sulfurtransferase activity|0016783||IEA;go_process=sulfur amino acid catabolic process|0000098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217800.1;locus_tag=AL42_RS22145;product=sulfurtransferase;protein_id=WP_003906046.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3648063 3648494 . + . ID=gene-AL42_RS22150;Name=AL42_RS22150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22150;old_locus_tag=AL42_03413 NZ_KK316784.1 Protein Homology CDS 3648063 3648494 . + 0 ID=cds-WP_003417152.1;Parent=gene-AL42_RS22150;Dbxref=GenBank:WP_003417152.1;Name=WP_003417152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217801.1;locus_tag=AL42_RS22150;product=SufE family protein;protein_id=WP_003417152.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3648602 3650404 . + . ID=gene-AL42_RS22155;Name=AL42_RS22155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22155;old_locus_tag=AL42_03414 NZ_KK316784.1 Protein Homology CDS 3648602 3650404 . + 0 ID=cds-WP_003417156.1;Parent=gene-AL42_RS22155;Dbxref=GenBank:WP_003417156.1;Name=WP_003417156.1;Ontology_term=GO:0004075,GO:0005524,GO:0016421,GO:0046872;gbkey=CDS;go_function=biotin carboxylase activity|0004075||IEA,ATP binding|0005524||IEA,CoA carboxylase activity|0016421||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217802.1;locus_tag=AL42_RS22155;product=acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha;protein_id=WP_003417156.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3650414 3651199 . - . ID=gene-AL42_RS22160;Name=sigF;gbkey=Gene;gene=sigF;gene_biotype=protein_coding;locus_tag=AL42_RS22160;old_locus_tag=AL42_03415 NZ_KK316784.1 Protein Homology CDS 3650414 3651199 . - 0 ID=cds-WP_003417158.1;Parent=gene-AL42_RS22160;Dbxref=GenBank:WP_003417158.1;Name=WP_003417158.1;gbkey=CDS;gene=sigF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217803.1;locus_tag=AL42_RS22160;product=RNA polymerase sigma factor SigF;protein_id=WP_003417158.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3651196 3651633 . - . ID=gene-AL42_RS22165;Name=rsbW;gbkey=Gene;gene=rsbW;gene_biotype=protein_coding;locus_tag=AL42_RS22165;old_locus_tag=AL42_03416 NZ_KK316784.1 Protein Homology CDS 3651196 3651633 . - 0 ID=cds-WP_003417160.1;Parent=gene-AL42_RS22165;Dbxref=GenBank:WP_003417160.1;Name=WP_003417160.1;gbkey=CDS;gene=rsbW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217804.4;locus_tag=AL42_RS22165;product=anti-sigma B factor RsbW;protein_id=WP_003417160.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3651831 3652142 . - . ID=gene-AL42_RS0105500;Name=usfY;gbkey=Gene;gene=usfY;gene_biotype=protein_coding;locus_tag=AL42_RS0105500;old_locus_tag=AL42_03417 NZ_KK316784.1 Protein Homology CDS 3651831 3652142 . - 0 ID=cds-WP_003900003.1;Parent=gene-AL42_RS0105500;Dbxref=GenBank:WP_003900003.1;Name=WP_003900003.1;gbkey=CDS;gene=usfY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900003.1;locus_tag=AL42_RS0105500;product=protein UsfY;protein_id=WP_003900003.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3652279 3652656 . - . ID=gene-AL42_RS22170;Name=AL42_RS22170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22170;old_locus_tag=AL42_03418 NZ_KK316784.1 Protein Homology CDS 3652279 3652656 . - 0 ID=cds-WP_003417165.1;Parent=gene-AL42_RS22170;Dbxref=GenBank:WP_003417165.1;Name=WP_003417165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217806.1;locus_tag=AL42_RS22170;product=hypothetical protein;protein_id=WP_003417165.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3652690 3654039 . - . ID=gene-AL42_RS22175;Name=lat;gbkey=Gene;gene=lat;gene_biotype=protein_coding;locus_tag=AL42_RS22175;old_locus_tag=AL42_03419 NZ_KK316784.1 Protein Homology CDS 3652690 3654039 . - 0 ID=cds-WP_003900004.1;Parent=gene-AL42_RS22175;Dbxref=GenBank:WP_003900004.1;Name=WP_003900004.1;Ontology_term=GO:0017000,GO:0030170,GO:0045484;gbkey=CDS;gene=lat;go_function=pyridoxal phosphate binding|0030170||IEA,L-lysine 6-transaminase activity|0045484||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217807.1;locus_tag=AL42_RS22175;product=L-lysine 6-transaminase;protein_id=WP_003900004.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3654090 3654542 . - . ID=gene-AL42_RS22180;Name=lrpA;gbkey=Gene;gene=lrpA;gene_biotype=protein_coding;locus_tag=AL42_RS22180;old_locus_tag=AL42_03420 NZ_KK316784.1 Protein Homology CDS 3654090 3654542 . - 0 ID=cds-WP_003417179.1;Parent=gene-AL42_RS22180;Dbxref=GenBank:WP_003417179.1;Name=WP_003417179.1;gbkey=CDS;gene=lrpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217808.1;locus_tag=AL42_RS22180;product=transcriptional regulator LrpA;protein_id=WP_003417179.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3654573 3655820 . + . ID=gene-AL42_RS22185;Name=hglS;gbkey=Gene;gene=hglS;gene_biotype=protein_coding;locus_tag=AL42_RS22185;old_locus_tag=AL42_03421 NZ_KK316784.1 Protein Homology CDS 3654573 3655820 . + 0 ID=cds-WP_003417184.1;Parent=gene-AL42_RS22185;Dbxref=GenBank:WP_003417184.1;Name=WP_003417184.1;gbkey=CDS;gene=hglS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009978791.1;locus_tag=AL42_RS22185;product=2-oxoadipate dioxygenase/decarboxylase;protein_id=WP_003417184.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3655820 3657331 . + . ID=gene-AL42_RS22190;Name=amaB;gbkey=Gene;gene=amaB;gene_biotype=protein_coding;gene_synonym=amaA;locus_tag=AL42_RS22190;old_locus_tag=AL42_03422 NZ_KK316784.1 Protein Homology CDS 3655820 3657331 . + 0 ID=cds-WP_031647624.1;Parent=gene-AL42_RS22190;Dbxref=GenBank:WP_031647624.1;Name=WP_031647624.1;gbkey=CDS;gene=amaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014383207.1;locus_tag=AL42_RS22190;product=L-piperidine-6-carboxylate dehydrogenase;protein_id=WP_031647624.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3657431 3658180 . - . ID=gene-AL42_RS22195;Name=AL42_RS22195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22195;old_locus_tag=AL42_03423 NZ_KK316784.1 Protein Homology CDS 3657431 3658180 . - 0 ID=cds-WP_003900005.1;Parent=gene-AL42_RS22195;Dbxref=GenBank:WP_003900005.1;Name=WP_003900005.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF025019.6;locus_tag=AL42_RS22195;product=ATP-binding protein;protein_id=WP_003900005.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3658311 3658976 . + . ID=gene-AL42_RS22200;Name=AL42_RS22200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22200;old_locus_tag=AL42_03424 NZ_KK316784.1 Protein Homology CDS 3658311 3658976 . + 0 ID=cds-WP_003417200.1;Parent=gene-AL42_RS22200;Dbxref=GenBank:WP_003417200.1;Name=WP_003417200.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217812.1;locus_tag=AL42_RS22200;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003417200.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3659020 3663561 . + . ID=gene-AL42_RS22205;Name=lhr;gbkey=Gene;gene=lhr;gene_biotype=protein_coding;locus_tag=AL42_RS22205;old_locus_tag=AL42_03425 NZ_KK316784.1 Protein Homology CDS 3659020 3663561 . + 0 ID=cds-WP_003901592.1;Parent=gene-AL42_RS22205;Dbxref=GenBank:WP_003901592.1;Name=WP_003901592.1;Ontology_term=GO:0003676,GO:0005524,GO:0016818;gbkey=CDS;gene=lhr;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217813.1;locus_tag=AL42_RS22205;product=ATP-dependent helicase;protein_id=WP_003901592.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3663565 3664332 . + . ID=gene-AL42_RS22210;Name=nei2;gbkey=Gene;gene=nei2;gene_biotype=protein_coding;locus_tag=AL42_RS22210;old_locus_tag=AL42_03426 NZ_KK316784.1 Protein Homology CDS 3663565 3664332 . + 0 ID=cds-WP_003900006.1;Parent=gene-AL42_RS22210;Dbxref=GenBank:WP_003900006.1;Name=WP_003900006.1;Ontology_term=GO:0006284,GO:0019104,GO:0140078;gbkey=CDS;gene=nei2;go_function=DNA N-glycosylase activity|0019104||IEA,class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217814.1;locus_tag=AL42_RS22210;product=endonuclease VIII Nei2;protein_id=WP_003900006.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3664355 3665269 . - . ID=gene-AL42_RS22215;Name=lpqC;gbkey=Gene;gene=lpqC;gene_biotype=protein_coding;locus_tag=AL42_RS22215;old_locus_tag=AL42_03427 NZ_KK316784.1 Protein Homology CDS 3664355 3665269 . - 0 ID=cds-WP_003417210.1;Parent=gene-AL42_RS22215;Dbxref=GenBank:WP_003417210.1;Name=WP_003417210.1;Ontology_term=GO:0050526;gbkey=CDS;gene=lpqC;go_function=poly(3-hydroxybutyrate) depolymerase activity|0050526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217815.1;locus_tag=AL42_RS22215;product=extracellular catalytic domain type 1 short-chain-length polyhydroxyalkanoate depolymerase;protein_id=WP_003417210.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3665296 3668208 . - . ID=gene-AL42_RS22220;Name=atsB;gbkey=Gene;gene=atsB;gene_biotype=protein_coding;locus_tag=AL42_RS22220;old_locus_tag=AL42_03428 NZ_KK316784.1 Protein Homology CDS 3665296 3668208 . - 0 ID=cds-WP_003417213.1;Parent=gene-AL42_RS22220;Dbxref=GenBank:WP_003417213.1;Name=WP_003417213.1;gbkey=CDS;gene=atsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217816.1;locus_tag=AL42_RS22220;product=arylsulfatase AtsB;protein_id=WP_003417213.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3668228 3669145 . - . ID=gene-AL42_RS22225;Name=AL42_RS22225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22225;old_locus_tag=AL42_03429 NZ_KK316784.1 Protein Homology CDS 3668228 3669145 . - 0 ID=cds-WP_003417215.1;Parent=gene-AL42_RS22225;Dbxref=GenBank:WP_003417215.1;Name=WP_003417215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217817.1;locus_tag=AL42_RS22225;product=RluA family pseudouridine synthase;protein_id=WP_003417215.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3669157 3669822 . - . ID=gene-AL42_RS22230;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=AL42_RS22230;old_locus_tag=AL42_03430 NZ_KK316784.1 Protein Homology CDS 3669157 3669822 . - 0 ID=cds-WP_003417216.1;Parent=gene-AL42_RS22230;Dbxref=GenBank:WP_003417216.1;Name=WP_003417216.1;Ontology_term=GO:0006817,GO:0030643,GO:0045936;gbkey=CDS;gene=phoU;go_process=phosphate ion transport|0006817||IEA,intracellular phosphate ion homeostasis|0030643||IEA,negative regulation of phosphate metabolic process|0045936||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217818.1;locus_tag=AL42_RS22230;product=phosphate signaling complex protein PhoU;protein_id=WP_003417216.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3669930 3671687 . - . ID=gene-AL42_RS22235;Name=AL42_RS22235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22235;old_locus_tag=AL42_03431 NZ_KK316784.1 Protein Homology CDS 3669930 3671687 . - 0 ID=cds-WP_003417217.1;Parent=gene-AL42_RS22235;Dbxref=GenBank:WP_003417217.1;Name=WP_003417217.1;Ontology_term=GO:0006072,GO:0004368,GO:0071949,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FAD binding|0071949||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217819.1;locus_tag=AL42_RS22235;product=glycerol-3-phosphate dehydrogenase/oxidase;protein_id=WP_003417217.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 3671702 3673183 . - . ID=gene-AL42_RS22240;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=pseudogene;locus_tag=AL42_RS22240;old_locus_tag=AL42_03432;pseudo=true NZ_KK316784.1 Protein Homology CDS 3671702 3673183 . - 0 ID=cds-AL42_RS22240;Parent=gene-AL42_RS22240;Note=internal stop;Ontology_term=GO:0045454,GO:0016491,GO:0050660;gbkey=CDS;gene=lpdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217820.1;locus_tag=AL42_RS22240;product=NAD(P)H-quinone dehydrogenase;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 3673386 3673865 . + . ID=gene-AL42_RS22245;Name=AL42_RS22245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22245;old_locus_tag=AL42_03433 NZ_KK316784.1 Protein Homology CDS 3673386 3673865 . + 0 ID=cds-WP_003417219.1;Parent=gene-AL42_RS22245;Dbxref=GenBank:WP_003417219.1;Name=WP_003417219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217821.1;locus_tag=AL42_RS22245;product=gamma-glutamylcyclotransferase family protein;protein_id=WP_003417219.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3673884 3675053 . - . ID=gene-AL42_RS22250;Name=AL42_RS22250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22250;old_locus_tag=AL42_03434 NZ_KK316784.1 Protein Homology CDS 3673884 3675053 . - 0 ID=cds-WP_003417220.1;Parent=gene-AL42_RS22250;Dbxref=GenBank:WP_003417220.1;Name=WP_003417220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177955.1;locus_tag=AL42_RS22250;product=M20 family metallopeptidase;protein_id=WP_003417220.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3675050 3676234 . - . ID=gene-AL42_RS22255;Name=AL42_RS22255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22255;old_locus_tag=AL42_03435 NZ_KK316784.1 Protein Homology CDS 3675050 3676234 . - 0 ID=cds-WP_003900009.1;Parent=gene-AL42_RS22255;Dbxref=GenBank:WP_003900009.1;Name=WP_003900009.1;Ontology_term=GO:0008270,GO:0016787;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177956.1;locus_tag=AL42_RS22255;product=M20 family metallopeptidase;protein_id=WP_003900009.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3676299 3677105 . + . ID=gene-AL42_RS22260;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=AL42_RS22260;old_locus_tag=AL42_03436 NZ_KK316784.1 Protein Homology CDS 3676299 3677105 . + 0 ID=cds-WP_003417233.1;Parent=gene-AL42_RS22260;Dbxref=GenBank:WP_003417233.1;Name=WP_003417233.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217824.1;locus_tag=AL42_RS22260;product=purine-nucleoside phosphorylase;protein_id=WP_003417233.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3677109 3678713 . + . ID=gene-AL42_RS22265;Name=pmmB;gbkey=Gene;gene=pmmB;gene_biotype=protein_coding;locus_tag=AL42_RS22265;old_locus_tag=AL42_03437 NZ_KK316784.1 Protein Homology CDS 3677109 3678713 . + 0 ID=cds-WP_003900011.1;Parent=gene-AL42_RS22265;Dbxref=GenBank:WP_003900011.1;Name=WP_003900011.1;Ontology_term=GO:0016868;gbkey=CDS;gene=pmmB;go_function=intramolecular phosphotransferase activity|0016868||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217825.1;locus_tag=AL42_RS22265;product=phospho-sugar mutase;protein_id=WP_003900011.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3678715 3679338 . - . ID=gene-AL42_RS22270;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=AL42_RS22270;old_locus_tag=AL42_03438 NZ_KK316784.1 Protein Homology CDS 3678715 3679338 . - 0 ID=cds-WP_003417245.1;Parent=gene-AL42_RS22270;Dbxref=GenBank:WP_003417245.1;Name=WP_003417245.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217826.1;locus_tag=AL42_RS22270;product=uracil phosphoribosyltransferase;protein_id=WP_003417245.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3679443 3680342 . + . ID=gene-AL42_RS22275;Name=sapM;gbkey=Gene;gene=sapM;gene_biotype=protein_coding;locus_tag=AL42_RS22275;old_locus_tag=AL42_03439 NZ_KK316784.1 Protein Homology CDS 3679443 3680342 . + 0 ID=cds-WP_003900013.1;Parent=gene-AL42_RS22275;Dbxref=GenBank:WP_003900013.1;Name=WP_003900013.1;gbkey=CDS;gene=sapM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217827.1;locus_tag=AL42_RS22275;product=phosphatidylinositol-3-phosphatase SapM;protein_id=WP_003900013.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3680366 3681628 . + . ID=gene-AL42_RS22280;Name=satS;gbkey=Gene;gene=satS;gene_biotype=protein_coding;locus_tag=AL42_RS22280;old_locus_tag=AL42_03440 NZ_KK316784.1 Protein Homology CDS 3680366 3681628 . + 0 ID=cds-WP_003417251.1;Parent=gene-AL42_RS22280;Dbxref=GenBank:WP_003417251.1;Name=WP_003417251.1;gbkey=CDS;gene=satS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217828.1;locus_tag=AL42_RS22280;product=protein export chaperone SatS;protein_id=WP_003417251.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3681649 3682575 . - . ID=gene-AL42_RS22285;Name=AL42_RS22285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22285;old_locus_tag=AL42_03441 NZ_KK316784.1 Protein Homology CDS 3681649 3682575 . - 0 ID=cds-WP_003417254.1;Parent=gene-AL42_RS22285;Dbxref=GenBank:WP_003417254.1;Name=WP_003417254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217829.1;locus_tag=AL42_RS22285;product=alpha/beta fold hydrolase;protein_id=WP_003417254.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3682601 3682771 . - . ID=gene-AL42_RS26440;Name=AL42_RS26440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS26440 NZ_KK316784.1 Protein Homology CDS 3682601 3682771 . - 0 ID=cds-WP_003900015.1;Parent=gene-AL42_RS26440;Dbxref=GenBank:WP_003900015.1;Name=WP_003900015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030045.1;locus_tag=AL42_RS26440;product=hypothetical protein;protein_id=WP_003900015.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3682950 3683261 . - . ID=gene-AL42_RS22290;Name=mtp;gbkey=Gene;gene=mtp;gene_biotype=protein_coding;locus_tag=AL42_RS22290;old_locus_tag=AL42_03442 NZ_KK316784.1 Protein Homology CDS 3682950 3683261 . - 0 ID=cds-WP_003417257.1;Parent=gene-AL42_RS22290;Dbxref=GenBank:WP_003417257.1;Name=WP_003417257.1;gbkey=CDS;gene=mtp;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177957.1;locus_tag=AL42_RS22290;product=pilin structural subunit Mtp;protein_id=WP_003417257.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3683332 3684429 . - . ID=gene-AL42_RS22295;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=AL42_RS22295;old_locus_tag=AL42_03443 NZ_KK316784.1 Protein Homology CDS 3683332 3684429 . - 0 ID=cds-WP_003417259.1;Parent=gene-AL42_RS22295;Dbxref=GenBank:WP_003417259.1;Name=WP_003417259.1;Ontology_term=GO:0009168,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine ribonucleoside monophosphate biosynthetic process|0009168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217830.1;locus_tag=AL42_RS22295;product=adenosine deaminase;protein_id=WP_003417259.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3684429 3685712 . - . ID=gene-AL42_RS22300;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=AL42_RS22300;old_locus_tag=AL42_03444 NZ_KK316784.1 Protein Homology CDS 3684429 3685712 . - 0 ID=cds-WP_003900016.1;Parent=gene-AL42_RS22300;Dbxref=GenBank:WP_003900016.1;Name=WP_003900016.1;Ontology_term=GO:0006206;gbkey=CDS;gene=deoA;go_process=pyrimidine nucleobase metabolic process|0006206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217831.1;locus_tag=AL42_RS22300;product=thymidine phosphorylase;protein_id=WP_003900016.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3685709 3686110 . - . ID=gene-AL42_RS22305;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=AL42_RS22305;old_locus_tag=AL42_03445 NZ_KK316784.1 Protein Homology CDS 3685709 3686110 . - 0 ID=cds-WP_003417264.1;Parent=gene-AL42_RS22305;Dbxref=GenBank:WP_003417264.1;Name=WP_003417264.1;Ontology_term=GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217832.1;locus_tag=AL42_RS22305;product=cytidine deaminase;protein_id=WP_003417264.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3686347 3686685 . + . ID=gene-AL42_RS22310;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;locus_tag=AL42_RS22310;old_locus_tag=AL42_03446 NZ_KK316784.1 Protein Homology CDS 3686347 3686685 . + 0 ID=cds-WP_003417267.1;Parent=gene-AL42_RS22310;Dbxref=GenBank:WP_003417267.1;Name=WP_003417267.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0045273;gbkey=CDS;gene=sdhC;go_component=respiratory chain complex II (succinate dehydrogenase)|0045273||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217833.1;locus_tag=AL42_RS22310;product=succinate dehydrogenase%2C cytochrome b556 subunit;protein_id=WP_003417267.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3686682 3687116 . + . ID=gene-AL42_RS22315;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;locus_tag=AL42_RS22315;old_locus_tag=AL42_03447 NZ_KK316784.1 Protein Homology CDS 3686682 3687116 . + 0 ID=cds-WP_003902441.1;Parent=gene-AL42_RS22315;Dbxref=GenBank:WP_003902441.1;Name=WP_003902441.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217834.1;locus_tag=AL42_RS22315;product=succinate dehydrogenase hydrophobic membrane anchor subunit;protein_id=WP_003902441.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3687245 3689017 . + . ID=gene-AL42_RS22320;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=AL42_RS22320;old_locus_tag=AL42_03448 NZ_KK316784.1 Protein Homology CDS 3687245 3689017 . + 0 ID=cds-WP_003417273.1;Parent=gene-AL42_RS22320;Dbxref=GenBank:WP_003417273.1;Name=WP_003417273.1;Ontology_term=GO:0006099,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217835.1;locus_tag=AL42_RS22320;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_003417273.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3689017 3689808 . + . ID=gene-AL42_RS22325;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=AL42_RS22325;old_locus_tag=AL42_03449 NZ_KK316784.1 Protein Homology CDS 3689017 3689808 . + 0 ID=cds-WP_003417279.1;Parent=gene-AL42_RS22325;Dbxref=GenBank:WP_003417279.1;Name=WP_003417279.1;Ontology_term=GO:0008177,GO:0046872;gbkey=CDS;gene=sdhB;go_function=succinate dehydrogenase (quinone) activity|0008177||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217836.1;locus_tag=AL42_RS22325;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_003417279.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3689887 3690315 . - . ID=gene-AL42_RS22330;Name=AL42_RS22330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22330;old_locus_tag=AL42_03450 NZ_KK316784.1 Protein Homology CDS 3689887 3690315 . - 0 ID=cds-WP_003417282.1;Parent=gene-AL42_RS22330;Dbxref=GenBank:WP_003417282.1;Name=WP_003417282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217837.1;locus_tag=AL42_RS22330;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003417282.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3690319 3690561 . - . ID=gene-AL42_RS22335;Name=AL42_RS22335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22335;old_locus_tag=AL42_03451 NZ_KK316784.1 Protein Homology CDS 3690319 3690561 . - 0 ID=cds-WP_003417286.1;Parent=gene-AL42_RS22335;Dbxref=GenBank:WP_003417286.1;Name=WP_003417286.1;Ontology_term=GO:0006276,GO:0006355,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_process=plasmid maintenance|0006276||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217838.1;locus_tag=AL42_RS22335;product=ribbon-helix-helix domain-containing protein;protein_id=WP_003417286.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3690683 3691297 . - . ID=gene-AL42_RS22340;Name=AL42_RS22340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22340;old_locus_tag=AL42_03452 NZ_KK316784.1 Protein Homology CDS 3690683 3691297 . - 0 ID=cds-WP_003417288.1;Parent=gene-AL42_RS22340;Dbxref=GenBank:WP_003417288.1;Name=WP_003417288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177958.1;locus_tag=AL42_RS22340;product=methyltransferase domain-containing protein;protein_id=WP_003417288.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3691294 3691959 . - . ID=gene-AL42_RS22345;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=AL42_RS22345;old_locus_tag=AL42_03453 NZ_KK316784.1 Protein Homology CDS 3691294 3691959 . - 0 ID=cds-WP_003417290.1;Parent=gene-AL42_RS22345;Dbxref=GenBank:WP_003417290.1;Name=WP_003417290.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaD;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177959.1;locus_tag=AL42_RS22345;product=molybdopterin converting factor subunit 1;protein_id=WP_003417290.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3691960 3692493 . - . ID=gene-AL42_RS22350;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=AL42_RS22350;old_locus_tag=AL42_03454 NZ_KK316784.1 Protein Homology CDS 3691960 3692493 . - 0 ID=cds-WP_003417293.1;Parent=gene-AL42_RS22350;Dbxref=GenBank:WP_003417293.1;Name=WP_003417293.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217841.3;locus_tag=AL42_RS22350;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_003417293.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3692490 3692864 . - . ID=gene-AL42_RS22355;Name=AL42_RS22355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22355;old_locus_tag=AL42_03455 NZ_KK316784.1 Protein Homology CDS 3692490 3692864 . - 0 ID=cds-WP_003417295.1;Parent=gene-AL42_RS22355;Dbxref=GenBank:WP_003417295.1;Name=WP_003417295.1;Ontology_term=GO:0006729,GO:0008124;gbkey=CDS;go_function=4-alpha-hydroxytetrahydrobiopterin dehydratase activity|0008124||IEA;go_process=tetrahydrobiopterin biosynthetic process|0006729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003417295.1;locus_tag=AL42_RS22355;product=4a-hydroxytetrahydrobiopterin dehydratase;protein_id=WP_003417295.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3692961 3694097 . - . ID=gene-AL42_RS22360;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=AL42_RS22360;old_locus_tag=AL42_03456 NZ_KK316784.1 Protein Homology CDS 3692961 3694097 . - 0 ID=cds-WP_003417297.1;Parent=gene-AL42_RS22360;Dbxref=GenBank:WP_003417297.1;Name=WP_003417297.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003417297.1;locus_tag=AL42_RS22360;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_003417297.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3694670 3695815 . + . ID=gene-AL42_RS22365;Name=AL42_RS22365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22365;old_locus_tag=AL42_03457 NZ_KK316784.1 Protein Homology CDS 3694670 3695815 . + 0 ID=cds-WP_003417299.1;Parent=gene-AL42_RS22365;Dbxref=GenBank:WP_003417299.1;Name=WP_003417299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015291369.1;locus_tag=AL42_RS22365;product=BTAD domain-containing putative transcriptional regulator;protein_id=WP_003417299.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 3695910 3696206 . - . ID=gene-AL42_RS22370;Name=AL42_RS22370;end_range=3696206,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS22370;old_locus_tag=AL42_03458;partial=true;pseudo=true NZ_KK316784.1 Protein Homology CDS 3695910 3696206 . - 0 ID=cds-AL42_RS22370;Parent=gene-AL42_RS22370;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3696206,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900020.1;locus_tag=AL42_RS22370;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 3696241 3696855 . - . ID=gene-AL42_RS22375;Name=AL42_RS22375;end_range=3696855,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS22375;old_locus_tag=AL42_03459;partial=true;pseudo=true NZ_KK316784.1 Protein Homology CDS 3696241 3696855 . - 0 ID=cds-AL42_RS22375;Parent=gene-AL42_RS22375;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=3696855,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL42_RS22375;partial=true;product=IS3-like element IS6110/IS987 family transposase;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 3699011 3699964 . + . ID=gene-AL42_RS26445;Name=AL42_RS26445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS26445;old_locus_tag=AL42_03460;partial=true;start_range=.,3699011 NZ_KK316784.1 Protein Homology CDS 3699011 3699964 . + 0 ID=cds-WP_078449022.1;Parent=gene-AL42_RS26445;Dbxref=GenBank:WP_078449022.1;Name=WP_078449022.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217844.1;locus_tag=AL42_RS26445;partial=true;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_078449022.1;start_range=.,3699011;transl_table=11 NZ_KK316784.1 RefSeq gene 3699897 3700835 . - . ID=gene-AL42_RS22380;Name=sigJ;gbkey=Gene;gene=sigJ;gene_biotype=protein_coding;locus_tag=AL42_RS22380;old_locus_tag=AL42_03461 NZ_KK316784.1 Protein Homology CDS 3699897 3700835 . - 0 ID=cds-WP_003417413.1;Parent=gene-AL42_RS22380;Dbxref=GenBank:WP_003417413.1;Name=WP_003417413.1;gbkey=CDS;gene=sigJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217845.1;locus_tag=AL42_RS22380;product=sigma-70 family RNA polymerase sigma factor SigJ;protein_id=WP_003417413.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3700844 3702211 . + . ID=gene-AL42_RS22385;Name=AL42_RS22385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22385;old_locus_tag=AL42_03462 NZ_KK316784.1 Protein Homology CDS 3700844 3702211 . + 0 ID=cds-WP_003902446.1;Parent=gene-AL42_RS22385;Dbxref=GenBank:WP_003902446.1;Name=WP_003902446.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006329602.1;locus_tag=AL42_RS22385;product=aspartate aminotransferase family protein;protein_id=WP_003902446.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3702280 3703497 . + . ID=gene-AL42_RS22390;Name=dacB1;gbkey=Gene;gene=dacB1;gene_biotype=protein_coding;locus_tag=AL42_RS22390;old_locus_tag=AL42_03463 NZ_KK316784.1 Protein Homology CDS 3702280 3703497 . + 0 ID=cds-WP_003417415.1;Parent=gene-AL42_RS22390;Dbxref=GenBank:WP_003417415.1;Name=WP_003417415.1;gbkey=CDS;gene=dacB1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217847.1;locus_tag=AL42_RS22390;product=D-alanyl-D-alanine carboxypeptidase DacB1;protein_id=WP_003417415.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3703722 3705101 . + . ID=gene-AL42_RS22395;Name=sugI;gbkey=Gene;gene=sugI;gene_biotype=protein_coding;locus_tag=AL42_RS22395;old_locus_tag=AL42_03464 NZ_KK316784.1 Protein Homology CDS 3703722 3705101 . + 0 ID=cds-WP_003912183.1;Parent=gene-AL42_RS22395;Dbxref=GenBank:WP_003912183.1;Name=WP_003912183.1;Ontology_term=GO:0008643,GO:0051119,GO:0016020;gbkey=CDS;gene=sugI;go_component=membrane|0016020||IEA;go_function=sugar transmembrane transporter activity|0051119||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912183.1;locus_tag=AL42_RS22395;product=sugar porter family MFS transporter;protein_id=WP_003912183.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3705098 3706249 . + . ID=gene-AL42_RS22400;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=AL42_RS22400;old_locus_tag=AL42_03465 NZ_KK316784.1 Protein Homology CDS 3705098 3706249 . + 0 ID=cds-WP_003417418.1;Parent=gene-AL42_RS22400;Dbxref=GenBank:WP_003417418.1;Name=WP_003417418.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217849.1;locus_tag=AL42_RS22400;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_003417418.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3706440 3707285 . - . ID=gene-AL42_RS22405;Name=prp1;gbkey=Gene;gene=prp1;gene_biotype=protein_coding;locus_tag=AL42_RS22405;old_locus_tag=AL42_03466 NZ_KK316784.1 Protein Homology CDS 3706440 3707285 . - 0 ID=cds-WP_003417421.1;Parent=gene-AL42_RS22405;Dbxref=GenBank:WP_003417421.1;Name=WP_003417421.1;gbkey=CDS;gene=prp1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217850.1;locus_tag=AL42_RS22405;product=PDZ-interacting protease regulator Ppr1;protein_id=WP_003417421.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3707760 3708200 . + . ID=gene-AL42_RS22410;Name=AL42_RS22410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22410;old_locus_tag=AL42_03467 NZ_KK316784.1 Protein Homology CDS 3707760 3708200 . + 0 ID=cds-WP_003900026.1;Parent=gene-AL42_RS22410;Dbxref=GenBank:WP_003900026.1;Name=WP_003900026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217851.1;locus_tag=AL42_RS22410;product=hypoxia response transcriptional regulator;protein_id=WP_003900026.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3708234 3709103 . - . ID=gene-AL42_RS22415;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=AL42_RS22415;old_locus_tag=AL42_03468 NZ_KK316784.1 Protein Homology CDS 3708234 3709103 . - 0 ID=cds-WP_003417435.1;Parent=gene-AL42_RS22415;Dbxref=GenBank:WP_003417435.1;Name=WP_003417435.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217852.1;locus_tag=AL42_RS22415;product=inner membrane protein YhjD;protein_id=WP_003417435.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3709124 3710134 . - . ID=gene-AL42_RS22420;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=AL42_RS22420;old_locus_tag=AL42_03469 NZ_KK316784.1 Protein Homology CDS 3709124 3710134 . - 0 ID=cds-WP_003417440.1;Parent=gene-AL42_RS22420;Dbxref=GenBank:WP_003417440.1;Name=WP_003417440.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217853.1;locus_tag=AL42_RS22420;product=tryptophan--tRNA ligase;protein_id=WP_003417440.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 3710302 3711051 . + . ID=gene-AL42_RS22425;Name=AL42_RS22425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS22425;old_locus_tag=AL42_03471;partial=true;pseudo=true;start_range=.,3710302 NZ_KK316784.1 Protein Homology CDS 3710302 3711051 . + 0 ID=cds-AL42_RS22425;Parent=gene-AL42_RS22425;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900674.1;locus_tag=AL42_RS22425;partial=true;product=alpha/beta fold hydrolase;pseudo=true;start_range=.,3710302;transl_table=11 NZ_KK316784.1 RefSeq gene 3711118 3712347 . - . ID=gene-AL42_RS22430;Name=AL42_RS22430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22430;old_locus_tag=AL42_03472 NZ_KK316784.1 Protein Homology CDS 3711118 3712347 . - 0 ID=cds-WP_003417452.1;Parent=gene-AL42_RS22430;Dbxref=GenBank:WP_003417452.1;Name=WP_003417452.1;Ontology_term=GO:0006102,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=isocitrate metabolic process|0006102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217856.1;locus_tag=AL42_RS22430;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_003417452.1;transl_table=11 NZ_KK316784.1 cmsearch riboswitch 3712474 3712593 . + . ID=id-NZ_KK316784.1:3712474..3712593;Dbxref=RFAM:RF00634;Note=SAM riboswitch class IV;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_KK316784.1 RefSeq gene 3712630 3713979 . + . ID=gene-AL42_RS22435;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=AL42_RS22435;old_locus_tag=AL42_03473 NZ_KK316784.1 Protein Homology CDS 3712630 3713979 . + 0 ID=cds-WP_003900028.1;Parent=gene-AL42_RS22435;Dbxref=GenBank:WP_003900028.1;Name=WP_003900028.1;Ontology_term=GO:0019346,GO:0016765;gbkey=CDS;gene=metC;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217857.1;locus_tag=AL42_RS22435;product=bifunctional o-acetylhomoserine/o-acetylserine sulfhydrylase;protein_id=WP_003900028.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3713991 3715130 . + . ID=gene-AL42_RS22440;Name=metX;gbkey=Gene;gene=metX;gene_biotype=protein_coding;locus_tag=AL42_RS22440;old_locus_tag=AL42_03474 NZ_KK316784.1 Protein Homology CDS 3713991 3715130 . + 0 ID=cds-WP_003417458.1;Parent=gene-AL42_RS22440;Dbxref=GenBank:WP_003417458.1;Name=WP_003417458.1;Ontology_term=GO:0009086,GO:0004414;gbkey=CDS;gene=metX;go_function=homoserine O-acetyltransferase activity|0004414||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217858.1;locus_tag=AL42_RS22440;product=homoserine O-acetyltransferase MetX;protein_id=WP_003417458.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3715127 3715858 . + . ID=gene-AL42_RS22445;Name=AL42_RS22445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22445;old_locus_tag=AL42_03475 NZ_KK316784.1 Protein Homology CDS 3715127 3715858 . + 0 ID=cds-WP_003417461.1;Parent=gene-AL42_RS22445;Dbxref=GenBank:WP_003417461.1;Name=WP_003417461.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217859.1;locus_tag=AL42_RS22445;product=class I SAM-dependent methyltransferase;protein_id=WP_003417461.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3715867 3718984 . - . ID=gene-AL42_RS27300;Name=AL42_RS27300;end_range=3718984,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27300;partial=true NZ_KK316784.1 Protein Homology CDS 3715867 3718984 . - 1 ID=cds-WP_031721924.1;Parent=gene-AL42_RS27300;Dbxref=GenBank:WP_031721924.1;Name=WP_031721924.1;end_range=3718984,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003911002.1;locus_tag=AL42_RS27300;partial=true;product=beta strand repeat-containing protein;protein_id=WP_031721924.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3719085 3724072 . - . ID=gene-AL42_RS27305;Name=AL42_RS27305;end_range=3724072,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27305;old_locus_tag=AL42_03476;partial=true;start_range=.,3719085 NZ_KK316784.1 Protein Homology CDS 3719085 3724072 . - 0 ID=cds-WP_192929055.1;Parent=gene-AL42_RS27305;Dbxref=GenBank:WP_192929055.1;Name=WP_192929055.1;end_range=3724072,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177960.1;locus_tag=AL42_RS27305;partial=true;product=beta strand repeat-containing protein;protein_id=WP_192929055.1;start_range=.,3719085;transl_table=11 NZ_KK316784.1 RefSeq gene 3724173 3725156 . - . ID=gene-AL42_RS26460;Name=AL42_RS26460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS26460;partial=true;start_range=.,3724173 NZ_KK316784.1 Protein Homology CDS 3724173 3725156 . - 0 ID=cds-WP_142197624.1;Parent=gene-AL42_RS26460;Dbxref=GenBank:WP_142197624.1;Name=WP_142197624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177960.1;locus_tag=AL42_RS26460;partial=true;product=PPE family protein;protein_id=WP_142197624.1;start_range=.,3724173;transl_table=11 NZ_KK316784.1 RefSeq gene 3725205 3726185 . - . ID=gene-AL42_RS27310;Name=AL42_RS27310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27310 NZ_KK316784.1 GeneMarkS-2+ CDS 3725205 3726185 . - 0 ID=cds-WP_031654342.1;Parent=gene-AL42_RS27310;Dbxref=GenBank:WP_031654342.1;Name=WP_031654342.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL42_RS27310;product=hypothetical protein;protein_id=WP_031654342.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 3726343 3731027 . - . ID=gene-AL42_RS22460;Name=AL42_RS22460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS22460;old_locus_tag=AL42_03477;pseudo=true NZ_KK316784.1 Protein Homology CDS 3726343 3731027 . - 0 ID=cds-AL42_RS22460;Parent=gene-AL42_RS22460;Note=frameshifted;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177962.1;locus_tag=AL42_RS22460;product=PE family protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 3731451 3731708 . - . ID=gene-AL42_RS22465;Name=AL42_RS22465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22465;old_locus_tag=AL42_03478 NZ_KK316784.1 Protein Homology CDS 3731451 3731708 . - 0 ID=cds-WP_003417619.1;Parent=gene-AL42_RS22465;Dbxref=GenBank:WP_003417619.1;Name=WP_003417619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217863.1;locus_tag=AL42_RS22465;product=DUF3017 domain-containing protein;protein_id=WP_003417619.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3731964 3741437 . - . ID=gene-AL42_RS22470;Name=AL42_RS22470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22470;old_locus_tag=AL42_03479 NZ_KK316784.1 Protein Homology CDS 3731964 3741437 . - 0 ID=cds-WP_003901612.1;Parent=gene-AL42_RS22470;Dbxref=GenBank:WP_003901612.1;Name=WP_003901612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177963.1;locus_tag=AL42_RS22470;product=PPE family protein;protein_id=WP_003901612.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3742018 3742509 . + . ID=gene-AL42_RS22475;Name=AL42_RS22475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22475;old_locus_tag=AL42_03480 NZ_KK316784.1 Protein Homology CDS 3742018 3742509 . + 0 ID=cds-WP_003422266.1;Parent=gene-AL42_RS22475;Dbxref=GenBank:WP_003422266.1;Name=WP_003422266.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013698.7;locus_tag=AL42_RS22475;product=IS110 family transposase;protein_id=WP_003422266.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 3742524 3742613 . + . ID=gene-AL42_RS27745;Name=AL42_RS27745;end_range=3742613,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS27745;partial=true;pseudo=true NZ_KK316784.1 Protein Homology CDS 3742524 3742613 . + 0 ID=cds-AL42_RS27745;Parent=gene-AL42_RS27745;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3742613,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218362.1;locus_tag=AL42_RS27745;partial=true;product=IS110 family transposase;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 3743011 3743364 . - . ID=gene-AL42_RS27750;Name=AL42_RS27750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS27750;partial=true;pseudo=true;start_range=.,3743011 NZ_KK316784.1 Protein Homology CDS 3743011 3743364 . - 0 ID=cds-AL42_RS27750;Parent=gene-AL42_RS27750;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013753.6;locus_tag=AL42_RS27750;partial=true;product=transposase;pseudo=true;start_range=.,3743011;transl_table=11 NZ_KK316784.1 RefSeq gene 3743581 3743868 . - . ID=gene-AL42_RS0105540;Name=AL42_RS0105540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0105540 NZ_KK316784.1 Protein Homology CDS 3743581 3743868 . - 0 ID=cds-WP_009938650.1;Parent=gene-AL42_RS0105540;Dbxref=GenBank:WP_009938650.1;Name=WP_009938650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009938650.1;locus_tag=AL42_RS0105540;product=hypothetical protein;protein_id=WP_009938650.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 3744205 3755354 . - . ID=gene-AL42_RS27010;Name=AL42_RS27010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS27010;pseudo=true NZ_KK316784.1 Protein Homology CDS 3744205 3755354 . - 0 ID=cds-AL42_RS27010;Parent=gene-AL42_RS27010;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177964.1;locus_tag=AL42_RS27010;product=PPE domain-containing protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 3755598 3756287 . - . ID=gene-AL42_RS27755;Name=AL42_RS27755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27755;old_locus_tag=AL42_03483 NZ_KK316784.1 Protein Homology CDS 3755598 3756287 . - 0 ID=cds-WP_003917774.1;Parent=gene-AL42_RS27755;Dbxref=GenBank:WP_003917774.1;Name=WP_003917774.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: protein motif:HMM:NF019643.6;locus_tag=AL42_RS27755;product=BBE domain-containing protein;protein_id=WP_003917774.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 3756474 3756961 . - . ID=gene-AL42_RS27760;Name=AL42_RS27760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS27760;old_locus_tag=AL42_03484;pseudo=true NZ_KK316784.1 Protein Homology CDS 3756474 3756961 . - 0 ID=cds-AL42_RS27760;Parent=gene-AL42_RS27760;Note=frameshifted;Ontology_term=GO:0050660;gbkey=CDS;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: protein motif:HMM:NF013714.6;locus_tag=AL42_RS27760;product=FAD-binding protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 3756988 3757248 . - . ID=gene-AL42_RS27770;Name=AL42_RS27770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27770;old_locus_tag=AL42_03485 NZ_KK316784.1 Protein Homology CDS 3756988 3757248 . - 0 ID=cds-WP_003417741.1;Parent=gene-AL42_RS27770;Dbxref=GenBank:WP_003417741.1;Name=WP_003417741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217870.2;locus_tag=AL42_RS27770;product=hypothetical protein;protein_id=WP_003417741.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3757363 3757752 . + . ID=gene-AL42_RS22500;Name=AL42_RS22500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22500;old_locus_tag=AL42_03486 NZ_KK316784.1 Protein Homology CDS 3757363 3757752 . + 0 ID=cds-WP_003417745.1;Parent=gene-AL42_RS22500;Dbxref=GenBank:WP_003417745.1;Name=WP_003417745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217871.1;locus_tag=AL42_RS22500;product=DUF732 domain-containing protein;protein_id=WP_003417745.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3757766 3758059 . - . ID=gene-AL42_RS22505;Name=AL42_RS22505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22505;old_locus_tag=AL42_03487 NZ_KK316784.1 Protein Homology CDS 3757766 3758059 . - 0 ID=cds-WP_003417749.1;Parent=gene-AL42_RS22505;Dbxref=GenBank:WP_003417749.1;Name=WP_003417749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217872.1;locus_tag=AL42_RS22505;product=DUF3017 domain-containing protein;protein_id=WP_003417749.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3758056 3758901 . - . ID=gene-AL42_RS22510;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=AL42_RS22510;old_locus_tag=AL42_03488 NZ_KK316784.1 Protein Homology CDS 3758056 3758901 . - 0 ID=cds-WP_003417751.1;Parent=gene-AL42_RS22510;Dbxref=GenBank:WP_003417751.1;Name=WP_003417751.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015354771.1;locus_tag=AL42_RS22510;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase;protein_id=WP_003417751.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3759025 3759300 . + . ID=gene-AL42_RS22515;Name=relJ;gbkey=Gene;gene=relJ;gene_biotype=protein_coding;locus_tag=AL42_RS22515;old_locus_tag=AL42_03489 NZ_KK316784.1 Protein Homology CDS 3759025 3759300 . + 0 ID=cds-WP_003417757.1;Parent=gene-AL42_RS22515;Dbxref=GenBank:WP_003417757.1;Name=WP_003417757.1;gbkey=CDS;gene=relJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217874.1;locus_tag=AL42_RS22515;product=type II toxin-antitoxin system antitoxin RelJ;protein_id=WP_003417757.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3759297 3759554 . + . ID=gene-AL42_RS22520;Name=relK;gbkey=Gene;gene=relK;gene_biotype=protein_coding;locus_tag=AL42_RS22520;old_locus_tag=AL42_03490 NZ_KK316784.1 Protein Homology CDS 3759297 3759554 . + 0 ID=cds-WP_003417760.1;Parent=gene-AL42_RS22520;Dbxref=GenBank:WP_003417760.1;Name=WP_003417760.1;Ontology_term=GO:0008219;gbkey=CDS;gene=relK;go_process=cell death|0008219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217875.1;locus_tag=AL42_RS22520;product=Txe/YoeB family addiction module toxin;protein_id=WP_003417760.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3759596 3760786 . + . ID=gene-AL42_RS22525;Name=AL42_RS22525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22525;old_locus_tag=AL42_03491 NZ_KK316784.1 Protein Homology CDS 3759596 3760786 . + 0 ID=cds-WP_003900033.1;Parent=gene-AL42_RS22525;Dbxref=GenBank:WP_003900033.1;Name=WP_003900033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217876.1;locus_tag=AL42_RS22525;product=NADH:flavin oxidoreductase;protein_id=WP_003900033.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3760903 3761271 . + . ID=gene-AL42_RS22530;Name=AL42_RS22530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22530;old_locus_tag=AL42_03492 NZ_KK316784.1 Protein Homology CDS 3760903 3761271 . + 0 ID=cds-WP_003417765.1;Parent=gene-AL42_RS22530;Dbxref=GenBank:WP_003417765.1;Name=WP_003417765.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217877.1;locus_tag=AL42_RS22530;product=FHA domain-containing protein;protein_id=WP_003417765.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3761268 3761819 . - . ID=gene-AL42_RS22535;Name=mfpA;gbkey=Gene;gene=mfpA;gene_biotype=protein_coding;locus_tag=AL42_RS22535;old_locus_tag=AL42_03493 NZ_KK316784.1 Protein Homology CDS 3761268 3761819 . - 0 ID=cds-WP_003417767.1;Parent=gene-AL42_RS22535;Dbxref=GenBank:WP_003417767.1;Name=WP_003417767.1;gbkey=CDS;gene=mfpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217878.1;locus_tag=AL42_RS22535;product=pentapeptide repeat protein MfpA;protein_id=WP_003417767.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3761826 3762407 . - . ID=gene-AL42_RS22540;Name=AL42_RS22540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22540;old_locus_tag=AL42_03494 NZ_KK316784.1 Protein Homology CDS 3761826 3762407 . - 0 ID=cds-WP_003417769.1;Parent=gene-AL42_RS22540;Dbxref=GenBank:WP_003417769.1;Name=WP_003417769.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217879.1;locus_tag=AL42_RS22540;product=GTP-binding protein;protein_id=WP_003417769.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3762388 3762756 . - . ID=gene-AL42_RS22545;Name=AL42_RS22545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22545;old_locus_tag=AL42_03495 NZ_KK316784.1 Protein Homology CDS 3762388 3762756 . - 0 ID=cds-WP_003417772.1;Parent=gene-AL42_RS22545;Dbxref=GenBank:WP_003417772.1;Name=WP_003417772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217880.1;locus_tag=AL42_RS22545;product=DUF742 domain-containing protein;protein_id=WP_003417772.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3762734 3763126 . - . ID=gene-AL42_RS22550;Name=AL42_RS22550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22550;old_locus_tag=AL42_03496 NZ_KK316784.1 Protein Homology CDS 3762734 3763126 . - 0 ID=cds-WP_003417776.1;Parent=gene-AL42_RS22550;Dbxref=GenBank:WP_003417776.1;Name=WP_003417776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217881.1;locus_tag=AL42_RS22550;product=serine protease inhibitor;protein_id=WP_003417776.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3763123 3765753 . - . ID=gene-AL42_RS22555;Name=AL42_RS22555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22555;old_locus_tag=AL42_03497 NZ_KK316784.1 Protein Homology CDS 3763123 3765753 . - 0 ID=cds-WP_003901616.1;Parent=gene-AL42_RS22555;Dbxref=GenBank:WP_003901616.1;Name=WP_003901616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217882.1;locus_tag=AL42_RS22555;product=sensor histidine kinase;protein_id=WP_003901616.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3765989 3766453 . + . ID=gene-AL42_RS22560;Name=spoU;gbkey=Gene;gene=spoU;gene_biotype=protein_coding;locus_tag=AL42_RS22560;old_locus_tag=AL42_03498 NZ_KK316784.1 Protein Homology CDS 3765989 3766453 . + 0 ID=cds-WP_003901617.1;Parent=gene-AL42_RS22560;Dbxref=GenBank:WP_003901617.1;Name=WP_003901617.1;Ontology_term=GO:0001510,GO:0003723,GO:0008173,GO:0141098,GO:1904047;gbkey=CDS;gene=spoU;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,tRNA (cytidine(34)-2'-O)-methyltransferase activity|0141098||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217883.1;locus_tag=AL42_RS22560;product=tRNA (cytidine(34)-2'-O)-methyltransferase;protein_id=WP_003901617.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3766820 3768595 . + . ID=gene-AL42_RS22565;Name=AL42_RS22565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22565;old_locus_tag=AL42_03499 NZ_KK316784.1 Protein Homology CDS 3766820 3768595 . + 0 ID=cds-WP_031721836.1;Parent=gene-AL42_RS22565;Dbxref=GenBank:WP_031721836.1;Name=WP_031721836.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177965.1;locus_tag=AL42_RS22565;product=PE family protein;protein_id=WP_031721836.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3768596 3769240 . - . ID=gene-AL42_RS22570;Name=AL42_RS22570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22570;old_locus_tag=AL42_03500 NZ_KK316784.1 Protein Homology CDS 3768596 3769240 . - 0 ID=cds-WP_003417881.1;Parent=gene-AL42_RS22570;Dbxref=GenBank:WP_003417881.1;Name=WP_003417881.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217885.1;locus_tag=AL42_RS22570;product=nitroreductase family protein;protein_id=WP_003417881.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3769263 3769673 . + . ID=gene-AL42_RS22575;Name=AL42_RS22575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22575;old_locus_tag=AL42_03501 NZ_KK316784.1 Protein Homology CDS 3769263 3769673 . + 0 ID=cds-WP_003912209.1;Parent=gene-AL42_RS22575;Dbxref=GenBank:WP_003912209.1;Name=WP_003912209.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912209.1;locus_tag=AL42_RS22575;product=TIGR03667 family PPOX class F420-dependent oxidoreductase;protein_id=WP_003912209.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3769762 3773037 . - . ID=gene-AL42_RS22580;Name=dnaE2;gbkey=Gene;gene=dnaE2;gene_biotype=protein_coding;locus_tag=AL42_RS22580;old_locus_tag=AL42_03502 NZ_KK316784.1 Protein Homology CDS 3769762 3773037 . - 0 ID=cds-WP_003417885.1;Parent=gene-AL42_RS22580;Dbxref=GenBank:WP_003417885.1;Name=WP_003417885.1;gbkey=CDS;gene=dnaE2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003417885.1;locus_tag=AL42_RS22580;product=error-prone DNA polymerase DnaE2;protein_id=WP_003417885.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3773193 3774533 . + . ID=gene-AL42_RS22585;Name=AL42_RS22585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22585;old_locus_tag=AL42_03503 NZ_KK316784.1 Protein Homology CDS 3773193 3774533 . + 0 ID=cds-WP_003900036.1;Parent=gene-AL42_RS22585;Dbxref=GenBank:WP_003900036.1;Name=WP_003900036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217888.1;locus_tag=AL42_RS22585;product=diacylglycerol O-acyltransferase;protein_id=WP_003900036.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3774575 3775750 . + . ID=gene-AL42_RS22590;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=AL42_RS22590;old_locus_tag=AL42_03504 NZ_KK316784.1 Protein Homology CDS 3774575 3775750 . + 0 ID=cds-WP_003417892.1;Parent=gene-AL42_RS22590;Dbxref=GenBank:WP_003417892.1;Name=WP_003417892.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217889.1;locus_tag=AL42_RS22590;product=trehalose-phosphatase;protein_id=WP_003417892.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 3775804 3775893 . + . ID=gene-AL42_RS26485;Name=AL42_RS26485;end_range=3775893,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS26485;old_locus_tag=AL42_03505;partial=true;pseudo=true NZ_KK316784.1 Protein Homology CDS 3775804 3775893 . + 0 ID=cds-AL42_RS26485;Parent=gene-AL42_RS26485;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3775893,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177968.1;locus_tag=AL42_RS26485;partial=true;product=PE domain-containing protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 3776002 3776628 . + . ID=gene-AL42_RS22595;Name=AL42_RS22595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22595;old_locus_tag=AL42_03506 NZ_KK316784.1 Protein Homology CDS 3776002 3776628 . + 0 ID=cds-WP_009938655.1;Parent=gene-AL42_RS22595;Dbxref=GenBank:WP_009938655.1;Name=WP_009938655.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: protein motif:HMM:NF012596.6;locus_tag=AL42_RS22595;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_009938655.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3776629 3776877 . + . ID=gene-AL42_RS27775;Name=AL42_RS27775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27775;old_locus_tag=AL42_03507 NZ_KK316784.1 Protein Homology CDS 3776629 3776877 . + 0 ID=cds-WP_003417897.1;Parent=gene-AL42_RS27775;Dbxref=GenBank:WP_003417897.1;Name=WP_003417897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014001712.1;locus_tag=AL42_RS27775;product=Clp protease/crotonase-like domain-containing protein;protein_id=WP_003417897.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3776882 3778309 . + . ID=gene-AL42_RS22605;Name=amiD;gbkey=Gene;gene=amiD;gene_biotype=protein_coding;locus_tag=AL42_RS22605;old_locus_tag=AL42_03508 NZ_KK316784.1 Protein Homology CDS 3776882 3778309 . + 0 ID=cds-WP_003417900.1;Parent=gene-AL42_RS22605;Dbxref=GenBank:WP_003417900.1;Name=WP_003417900.1;Ontology_term=GO:0003824;gbkey=CDS;gene=amiD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217892.1;locus_tag=AL42_RS22605;product=amidase;protein_id=WP_003417900.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3778417 3779070 . + . ID=gene-AL42_RS22610;Name=AL42_RS22610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22610;old_locus_tag=AL42_03509 NZ_KK316784.1 Protein Homology CDS 3778417 3779070 . + 0 ID=cds-WP_003417903.1;Parent=gene-AL42_RS22610;Dbxref=GenBank:WP_003417903.1;Name=WP_003417903.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217893.1;locus_tag=AL42_RS22610;product=HAD family hydrolase;protein_id=WP_003417903.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3779109 3780614 . - . ID=gene-AL42_RS22615;Name=AL42_RS22615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22615;old_locus_tag=AL42_03510 NZ_KK316784.1 Protein Homology CDS 3779109 3780614 . - 0 ID=cds-WP_003417905.1;Parent=gene-AL42_RS22615;Dbxref=GenBank:WP_003417905.1;Name=WP_003417905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217894.1;locus_tag=AL42_RS22615;product=type B diterpene cyclase;protein_id=WP_003417905.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3780619 3781509 . - . ID=gene-AL42_RS22620;Name=AL42_RS22620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22620;old_locus_tag=AL42_03511 NZ_KK316784.1 Protein Homology CDS 3780619 3781509 . - 0 ID=cds-WP_031721837.1;Parent=gene-AL42_RS22620;Dbxref=GenBank:WP_031721837.1;Name=WP_031721837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217895.1;locus_tag=AL42_RS22620;product=diterpene synthase;protein_id=WP_031721837.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3781518 3783323 . - . ID=gene-AL42_RS22625;Name=AL42_RS22625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22625;old_locus_tag=AL42_03512 NZ_KK316784.1 Protein Homology CDS 3781518 3783323 . - 0 ID=cds-WP_023644584.1;Parent=gene-AL42_RS22625;Dbxref=GenBank:WP_023644584.1;Name=WP_023644584.1;Ontology_term=GO:0016114,GO:0008661;gbkey=CDS;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010950880.1;locus_tag=AL42_RS22625;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_023644584.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3783353 3784342 . - . ID=gene-AL42_RS22630;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;locus_tag=AL42_RS22630;old_locus_tag=AL42_03513 NZ_KK316784.1 Protein Homology CDS 3783353 3784342 . - 0 ID=cds-WP_003417912.1;Parent=gene-AL42_RS22630;Dbxref=GenBank:WP_003417912.1;Name=WP_003417912.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177967.1;locus_tag=AL42_RS22630;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_003417912.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 3784342 3784737 . - . ID=gene-AL42_RS0105550;Name=AL42_RS0105550;end_range=3784737,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS0105550;partial=true;pseudo=true NZ_KK316784.1 Protein Homology CDS 3784342 3784737 . - 0 ID=cds-AL42_RS0105550;Parent=gene-AL42_RS0105550;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008299;end_range=3784737,.;gbkey=CDS;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217900.1;locus_tag=AL42_RS0105550;partial=true;product=polyprenyl synthetase family protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 3784784 3786045 . + . ID=gene-AL42_RS22640;Name=AL42_RS22640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22640;old_locus_tag=AL42_03515 NZ_KK316784.1 Protein Homology CDS 3784784 3785072 . + 0 ID=cds-WP_087902221.1-11;Parent=gene-AL42_RS22640;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL42_RS22640;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316784.1 Protein Homology CDS 3785072 3786045 . + 2 ID=cds-WP_087902221.1-11;Parent=gene-AL42_RS22640;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL42_RS22640;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 3786087 3786752 . - . ID=gene-AL42_RS22645;Name=AL42_RS22645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS22645;old_locus_tag=AL42_03516;partial=true;pseudo=true;start_range=.,3786087 NZ_KK316784.1 Protein Homology CDS 3786087 3786752 . - 0 ID=cds-AL42_RS22645;Parent=gene-AL42_RS22645;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0008299;gbkey=CDS;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217900.1;locus_tag=AL42_RS22645;partial=true;product=polyprenyl synthetase family protein;pseudo=true;start_range=.,3786087;transl_table=11 NZ_KK316784.1 RefSeq gene 3787506 3787898 . - . ID=gene-AL42_RS22650;Name=AL42_RS22650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22650;old_locus_tag=AL42_03517 NZ_KK316784.1 Protein Homology CDS 3787506 3787898 . - 0 ID=cds-WP_003417916.1;Parent=gene-AL42_RS22650;Dbxref=GenBank:WP_003417916.1;Name=WP_003417916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217901.1;locus_tag=AL42_RS22650;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003417916.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3787898 3788173 . - . ID=gene-AL42_RS22655;Name=AL42_RS22655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22655;old_locus_tag=AL42_03518 NZ_KK316784.1 Protein Homology CDS 3787898 3788173 . - 0 ID=cds-WP_003912214.1;Parent=gene-AL42_RS22655;Dbxref=GenBank:WP_003912214.1;Name=WP_003912214.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912214.1;locus_tag=AL42_RS22655;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_003912214.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 3788355 3789726 . + . ID=gene-AL42_RS26490;Name=AL42_RS26490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS26490;pseudo=true NZ_KK316784.1 Protein Homology CDS 3788355 3789726 . + 0 ID=cds-AL42_RS26490;Parent=gene-AL42_RS26490;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612244.1;locus_tag=AL42_RS26490;product=ISNCY family transposase;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 3789916 3792093 . + . ID=gene-AL42_RS22670;Name=AL42_RS22670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22670;old_locus_tag=AL42_03521 NZ_KK316784.1 Protein Homology CDS 3789916 3792093 . + 0 ID=cds-WP_016330440.1;Parent=gene-AL42_RS22670;Dbxref=GenBank:WP_016330440.1;Name=WP_016330440.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177968.1;locus_tag=AL42_RS22670;product=PE family protein;protein_id=WP_016330440.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3792164 3793036 . - . ID=gene-AL42_RS22675;Name=htdY;gbkey=Gene;gene=htdY;gene_biotype=protein_coding;locus_tag=AL42_RS22675;old_locus_tag=AL42_03522 NZ_KK316784.1 Protein Homology CDS 3792164 3793036 . - 0 ID=cds-WP_003906098.1;Parent=gene-AL42_RS22675;Dbxref=GenBank:WP_003906098.1;Name=WP_003906098.1;gbkey=CDS;gene=htdY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217906.1;locus_tag=AL42_RS22675;product=3-hydroxyacyl-thioester dehydratase HtdY;protein_id=WP_003906098.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3793110 3793820 . + . ID=gene-AL42_RS22680;Name=lpqD;gbkey=Gene;gene=lpqD;gene_biotype=protein_coding;locus_tag=AL42_RS22680;old_locus_tag=AL42_03523 NZ_KK316784.1 Protein Homology CDS 3793110 3793820 . + 0 ID=cds-WP_003417932.1;Parent=gene-AL42_RS22680;Dbxref=GenBank:WP_003417932.1;Name=WP_003417932.1;Ontology_term=GO:0016791;gbkey=CDS;gene=lpqD;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217907.1;locus_tag=AL42_RS22680;product=histidine phosphatase family protein;protein_id=WP_003417932.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3793866 3795818 . + . ID=gene-AL42_RS22685;Name=AL42_RS22685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22685;old_locus_tag=AL42_03524 NZ_KK316784.1 Protein Homology CDS 3793866 3795818 . + 0 ID=cds-WP_003417940.1;Parent=gene-AL42_RS22685;Dbxref=GenBank:WP_003417940.1;Name=WP_003417940.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217908.1;locus_tag=AL42_RS22685;product=SDR family oxidoreductase;protein_id=WP_003417940.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3795819 3796682 . - . ID=gene-AL42_RS22690;Name=cmaA1;gbkey=Gene;gene=cmaA1;gene_biotype=protein_coding;locus_tag=AL42_RS22690;old_locus_tag=AL42_03525 NZ_KK316784.1 Protein Homology CDS 3795819 3796682 . - 0 ID=cds-WP_003900041.1;Parent=gene-AL42_RS22690;Dbxref=GenBank:WP_003900041.1;Name=WP_003900041.1;gbkey=CDS;gene=cmaA1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217909.1;locus_tag=AL42_RS22690;product=cyclopropane mycolic acid synthase CmaA1;protein_id=WP_003900041.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3796706 3797632 . + . ID=gene-AL42_RS22695;Name=iunH;gbkey=Gene;gene=iunH;gene_biotype=protein_coding;locus_tag=AL42_RS22695;old_locus_tag=AL42_03526 NZ_KK316784.1 Protein Homology CDS 3796706 3797632 . + 0 ID=cds-WP_003417946.1;Parent=gene-AL42_RS22695;Dbxref=GenBank:WP_003417946.1;Name=WP_003417946.1;gbkey=CDS;gene=iunH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217910.1;locus_tag=AL42_RS22695;product=nucleoside hydrolase IunH;protein_id=WP_003417946.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3797687 3799270 . - . ID=gene-AL42_RS22700;Name=AL42_RS22700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22700;old_locus_tag=AL42_03527 NZ_KK316784.1 Protein Homology CDS 3797687 3799270 . - 0 ID=cds-WP_003900042.1;Parent=gene-AL42_RS22700;Dbxref=GenBank:WP_003900042.1;Name=WP_003900042.1;Ontology_term=GO:0006261,GO:0000287,GO:0003684,GO:0003887;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217911.1;locus_tag=AL42_RS22700;product=DNA polymerase Y family protein;protein_id=WP_003900042.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3799267 3799881 . - . ID=gene-AL42_RS22705;Name=AL42_RS22705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22705;old_locus_tag=AL42_03528 NZ_KK316784.1 Protein Homology CDS 3799267 3799881 . - 0 ID=cds-WP_003900043.1;Parent=gene-AL42_RS22705;Dbxref=GenBank:WP_003900043.1;Name=WP_003900043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217912.2;locus_tag=AL42_RS22705;product=hypothetical protein;protein_id=WP_003900043.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3799880 3800590 . + . ID=gene-AL42_RS22710;Name=AL42_RS22710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22710;old_locus_tag=AL42_03529 NZ_KK316784.1 Protein Homology CDS 3799880 3800590 . + 0 ID=cds-WP_016810333.1;Parent=gene-AL42_RS22710;Dbxref=GenBank:WP_016810333.1;Name=WP_016810333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017487565.1;locus_tag=AL42_RS22710;product=hypothetical protein;protein_id=WP_016810333.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3800746 3802323 . - . ID=gene-AL42_RS22715;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=AL42_RS22715;old_locus_tag=AL42_03530 NZ_KK316784.1 Protein Homology CDS 3800746 3802323 . - 0 ID=cds-WP_003417952.1;Parent=gene-AL42_RS22715;Dbxref=GenBank:WP_003417952.1;Name=WP_003417952.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217913.1;locus_tag=AL42_RS22715;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_003417952.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3802335 3803243 . - . ID=gene-AL42_RS22720;Name=hpnD;gbkey=Gene;gene=hpnD;gene_biotype=protein_coding;locus_tag=AL42_RS22720;old_locus_tag=AL42_03531 NZ_KK316784.1 Protein Homology CDS 3802335 3803243 . - 0 ID=cds-WP_003417954.1;Parent=gene-AL42_RS22720;Dbxref=GenBank:WP_003417954.1;Name=WP_003417954.1;Ontology_term=GO:0016117,GO:0046905;gbkey=CDS;gene=hpnD;go_function=15-cis-phytoene synthase activity|0046905||IEA;go_process=carotenoid biosynthetic process|0016117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217914.1;locus_tag=AL42_RS22720;product=presqualene diphosphate synthase HpnD;protein_id=WP_003417954.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3803272 3804351 . - . ID=gene-AL42_RS22725;Name=idsA1;gbkey=Gene;gene=idsA1;gene_biotype=protein_coding;locus_tag=AL42_RS22725;old_locus_tag=AL42_03532 NZ_KK316784.1 Protein Homology CDS 3803272 3804351 . - 0 ID=cds-WP_003417957.1;Parent=gene-AL42_RS22725;Dbxref=GenBank:WP_003417957.1;Name=WP_003417957.1;gbkey=CDS;gene=idsA1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177970.1;locus_tag=AL42_RS22725;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WP_003417957.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3804500 3805420 . + . ID=gene-AL42_RS22730;Name=AL42_RS22730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22730;old_locus_tag=AL42_03533 NZ_KK316784.1 Protein Homology CDS 3804500 3805420 . + 0 ID=cds-WP_003912218.1;Parent=gene-AL42_RS22730;Dbxref=GenBank:WP_003912218.1;Name=WP_003912218.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009936179.1;locus_tag=AL42_RS22730;product=class I SAM-dependent methyltransferase;protein_id=WP_003912218.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3805484 3806272 . + . ID=gene-AL42_RS22735;Name=AL42_RS22735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22735;old_locus_tag=AL42_03534 NZ_KK316784.1 Protein Homology CDS 3805484 3806272 . + 0 ID=cds-WP_003417961.1;Parent=gene-AL42_RS22735;Dbxref=GenBank:WP_003417961.1;Name=WP_003417961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217917.1;locus_tag=AL42_RS22735;product=beta-phosphoglucomutase family hydrolase;protein_id=WP_003417961.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3806287 3808647 . + . ID=gene-AL42_RS22740;Name=AL42_RS22740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22740;old_locus_tag=AL42_03535 NZ_KK316784.1 Protein Homology CDS 3806287 3808647 . + 0 ID=cds-WP_029400629.1;Parent=gene-AL42_RS22740;Dbxref=GenBank:WP_029400629.1;Name=WP_029400629.1;Ontology_term=GO:0005975,GO:0016787,GO:0030246;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217918.1;locus_tag=AL42_RS22740;product=glycoside hydrolase family 65 protein;protein_id=WP_029400629.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3808925 3809137 . - . ID=gene-AL42_RS26500;Name=AL42_RS26500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS26500 NZ_KK316784.1 Protein Homology CDS 3808925 3809137 . - 0 ID=cds-WP_003915386.1;Parent=gene-AL42_RS26500;Dbxref=GenBank:WP_003915386.1;Name=WP_003915386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003915386.1;locus_tag=AL42_RS26500;product=hypothetical protein;protein_id=WP_003915386.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3809130 3810368 . - . ID=gene-AL42_RS22745;Name=AL42_RS22745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22745;old_locus_tag=AL42_03536 NZ_KK316784.1 Protein Homology CDS 3809130 3810368 . - 0 ID=cds-WP_003902474.1;Parent=gene-AL42_RS22745;Dbxref=GenBank:WP_003902474.1;Name=WP_003902474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217919.1;locus_tag=AL42_RS22745;product=DegT/DnrJ/EryC1/StrS family aminotransferase;protein_id=WP_003902474.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3810739 3812340 . - . ID=gene-AL42_RS22750;Name=AL42_RS22750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22750;old_locus_tag=AL42_03537 NZ_KK316784.1 Protein Homology CDS 3810739 3812340 . - 0 ID=cds-WP_003417969.1;Parent=gene-AL42_RS22750;Dbxref=GenBank:WP_003417969.1;Name=WP_003417969.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217920.1;locus_tag=AL42_RS22750;product=FAD/NAD(P)-binding protein;protein_id=WP_003417969.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3812357 3813061 . - . ID=gene-AL42_RS22755;Name=AL42_RS22755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22755;old_locus_tag=AL42_03538 NZ_KK316784.1 Protein Homology CDS 3812357 3813061 . - 0 ID=cds-WP_003417980.1;Parent=gene-AL42_RS22755;Dbxref=GenBank:WP_003417980.1;Name=WP_003417980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217921.1;locus_tag=AL42_RS22755;product=dTDP-4-amino-4%2C6-dideoxyglucose formyltransferase;protein_id=WP_003417980.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3813179 3813745 . - . ID=gene-AL42_RS22760;Name=AL42_RS22760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22760;old_locus_tag=AL42_03539 NZ_KK316784.1 Protein Homology CDS 3813179 3813745 . - 0 ID=cds-WP_003417984.1;Parent=gene-AL42_RS22760;Dbxref=GenBank:WP_003417984.1;Name=WP_003417984.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217922.1;locus_tag=AL42_RS22760;product=TetR/AcrR family transcriptional regulator;protein_id=WP_003417984.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3813807 3814694 . + . ID=gene-AL42_RS22765;Name=AL42_RS22765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22765;old_locus_tag=AL42_03540 NZ_KK316784.1 Protein Homology CDS 3813807 3814694 . + 0 ID=cds-WP_003900050.1;Parent=gene-AL42_RS22765;Dbxref=GenBank:WP_003900050.1;Name=WP_003900050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217923.1;locus_tag=AL42_RS22765;product=alpha-ketoglutarate-dependent sulfate ester dioxygenase;protein_id=WP_003900050.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3814750 3815028 . + . ID=gene-AL42_RS22770;Name=AL42_RS22770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22770;old_locus_tag=AL42_03541 NZ_KK316784.1 Protein Homology CDS 3814750 3815028 . + 0 ID=cds-WP_180895138.1;Parent=gene-AL42_RS22770;Dbxref=GenBank:WP_180895138.1;Name=WP_180895138.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912220.1;locus_tag=AL42_RS22770;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_180895138.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3815025 3815435 . + . ID=gene-AL42_RS22775;Name=AL42_RS22775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22775;old_locus_tag=AL42_03542 NZ_KK316784.1 Protein Homology CDS 3815025 3815435 . + 0 ID=cds-WP_003417998.1;Parent=gene-AL42_RS22775;Dbxref=GenBank:WP_003417998.1;Name=WP_003417998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217925.1;locus_tag=AL42_RS22775;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003417998.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3815468 3817204 . - . ID=gene-AL42_RS22780;Name=choD;gbkey=Gene;gene=choD;gene_biotype=protein_coding;locus_tag=AL42_RS22780;old_locus_tag=AL42_03543 NZ_KK316784.1 Protein Homology CDS 3815468 3817204 . - 0 ID=cds-WP_003418002.1;Parent=gene-AL42_RS22780;Dbxref=GenBank:WP_003418002.1;Name=WP_003418002.1;gbkey=CDS;gene=choD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217926.1;locus_tag=AL42_RS22780;product=cholesterol oxidase;protein_id=WP_003418002.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3817260 3818387 . - . ID=gene-AL42_RS22785;Name=AL42_RS22785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22785;old_locus_tag=AL42_03544 NZ_KK316784.1 Protein Homology CDS 3817260 3818387 . - 0 ID=cds-WP_003418005.1;Parent=gene-AL42_RS22785;Dbxref=GenBank:WP_003418005.1;Name=WP_003418005.1;Ontology_term=GO:0003938;gbkey=CDS;go_function=IMP dehydrogenase activity|0003938||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217927.1;locus_tag=AL42_RS22785;product=GuaB3 family IMP dehydrogenase-related protein;protein_id=WP_003418005.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3818407 3819996 . - . ID=gene-AL42_RS22790;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=AL42_RS22790;old_locus_tag=AL42_03545 NZ_KK316784.1 Protein Homology CDS 3818407 3819996 . - 0 ID=cds-WP_003901630.1;Parent=gene-AL42_RS22790;Dbxref=GenBank:WP_003901630.1;Name=WP_003901630.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217928.1;locus_tag=AL42_RS22790;product=IMP dehydrogenase;protein_id=WP_003901630.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3820203 3820613 . + . ID=gene-AL42_RS22795;Name=AL42_RS22795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22795;old_locus_tag=AL42_03546 NZ_KK316784.1 Protein Homology CDS 3820203 3820613 . + 0 ID=cds-WP_003418008.1;Parent=gene-AL42_RS22795;Dbxref=GenBank:WP_003418008.1;Name=WP_003418008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217929.1;locus_tag=AL42_RS22795;product=DUF5319 domain-containing protein;protein_id=WP_003418008.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3820623 3821522 . - . ID=gene-AL42_RS22800;Name=rsdA;gbkey=Gene;gene=rsdA;gene_biotype=protein_coding;locus_tag=AL42_RS22800;old_locus_tag=AL42_03547 NZ_KK316784.1 Protein Homology CDS 3820623 3821522 . - 0 ID=cds-WP_003418011.1;Parent=gene-AL42_RS22800;Dbxref=GenBank:WP_003418011.1;Name=WP_003418011.1;gbkey=CDS;gene=rsdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217930.1;locus_tag=AL42_RS22800;product=anti-sigma D factor RsdA;protein_id=WP_003418011.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3821515 3822090 . - . ID=gene-AL42_RS22805;Name=sigD;gbkey=Gene;gene=sigD;gene_biotype=protein_coding;locus_tag=AL42_RS22805;old_locus_tag=AL42_03548 NZ_KK316784.1 Protein Homology CDS 3821515 3822090 . - 0 ID=cds-WP_003917787.1;Parent=gene-AL42_RS22805;Dbxref=GenBank:WP_003917787.1;Name=WP_003917787.1;gbkey=CDS;gene=sigD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917787.1;locus_tag=AL42_RS22805;product=ECF RNA polymerase sigma factor SigD;protein_id=WP_003917787.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3822171 3822998 . - . ID=gene-AL42_RS22810;Name=AL42_RS22810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22810;old_locus_tag=AL42_03549 NZ_KK316784.1 Protein Homology CDS 3822171 3822998 . - 0 ID=cds-WP_003900051.1;Parent=gene-AL42_RS22810;Dbxref=GenBank:WP_003900051.1;Name=WP_003900051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217932.1;locus_tag=AL42_RS22810;product=hypothetical protein;protein_id=WP_003900051.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3823369 3823677 . + . ID=gene-AL42_RS22815;Name=whiB3;gbkey=Gene;gene=whiB3;gene_biotype=protein_coding;locus_tag=AL42_RS22815;old_locus_tag=AL42_03550 NZ_KK316784.1 Protein Homology CDS 3823369 3823677 . + 0 ID=cds-WP_003418017.1;Parent=gene-AL42_RS22815;Dbxref=GenBank:WP_003418017.1;Name=WP_003418017.1;gbkey=CDS;gene=whiB3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217933.1;locus_tag=AL42_RS22815;product=redox-responsive transcriptional regulator WhiB3;protein_id=WP_003418017.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3823749 3825368 . - . ID=gene-AL42_RS22820;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=AL42_RS22820;old_locus_tag=AL42_03551 NZ_KK316784.1 Protein Homology CDS 3823749 3825368 . - 0 ID=cds-WP_003418021.1;Parent=gene-AL42_RS22820;Dbxref=GenBank:WP_003418021.1;Name=WP_003418021.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217934.1;locus_tag=AL42_RS22820;product=chaperonin GroEL;protein_id=WP_003418021.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3825463 3825765 . - . ID=gene-AL42_RS22825;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=AL42_RS22825;old_locus_tag=AL42_03552 NZ_KK316784.1 Protein Homology CDS 3825463 3825765 . - 0 ID=cds-WP_003418028.1;Parent=gene-AL42_RS22825;Dbxref=GenBank:WP_003418028.1;Name=WP_003418028.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=groES;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003929249.1;locus_tag=AL42_RS22825;product=co-chaperone GroES;protein_id=WP_003418028.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3826032 3827066 . - . ID=gene-AL42_RS22830;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=AL42_RS22830;old_locus_tag=AL42_03553 NZ_KK316784.1 Protein Homology CDS 3826032 3827066 . - 0 ID=cds-WP_003900052.1;Parent=gene-AL42_RS22830;Dbxref=GenBank:WP_003900052.1;Name=WP_003900052.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217936.1;locus_tag=AL42_RS22830;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_003900052.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3827063 3827539 . - . ID=gene-AL42_RS22835;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=AL42_RS22835;old_locus_tag=AL42_03554 NZ_KK316784.1 Protein Homology CDS 3827063 3827539 . - 0 ID=cds-WP_003418034.1;Parent=gene-AL42_RS22835;Dbxref=GenBank:WP_003418034.1;Name=WP_003418034.1;Ontology_term=GO:0036211,GO:0042254,GO:0008999;gbkey=CDS;gene=rimI;go_function=protein-N-terminal-alanine acetyltransferase activity|0008999||IEA;go_process=protein modification process|0036211||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217937.1;locus_tag=AL42_RS22835;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_003418034.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3827536 3828171 . - . ID=gene-AL42_RS22840;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=AL42_RS22840;old_locus_tag=AL42_03555 NZ_KK316784.1 Protein Homology CDS 3827536 3828171 . - 0 ID=cds-WP_003418038.1;Parent=gene-AL42_RS22840;Dbxref=GenBank:WP_003418038.1;Name=WP_003418038.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217938.1;locus_tag=AL42_RS22840;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_003418038.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3828168 3828674 . - . ID=gene-AL42_RS22845;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=AL42_RS22845;old_locus_tag=AL42_03556 NZ_KK316784.1 Protein Homology CDS 3828168 3828674 . - 0 ID=cds-WP_003418042.1;Parent=gene-AL42_RS22845;Dbxref=GenBank:WP_003418042.1;Name=WP_003418042.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217939.1;locus_tag=AL42_RS22845;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_003418042.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3828671 3829831 . - . ID=gene-AL42_RS22850;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=AL42_RS22850;old_locus_tag=AL42_03557 NZ_KK316784.1 Protein Homology CDS 3828671 3829831 . - 0 ID=cds-WP_023637501.1;Parent=gene-AL42_RS22850;Dbxref=GenBank:WP_023637501.1;Name=WP_023637501.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015303874.1;locus_tag=AL42_RS22850;product=alanine racemase;protein_id=WP_023637501.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3829857 3830087 . + . ID=gene-AL42_RS26505;Name=AL42_RS26505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS26505 NZ_KK316784.1 Protein Homology CDS 3829857 3830087 . + 0 ID=cds-WP_003900685.1;Parent=gene-AL42_RS26505;Dbxref=GenBank:WP_003900685.1;Name=WP_003900685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900685.1;locus_tag=AL42_RS26505;product=histone acetyltransferase;protein_id=WP_003900685.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3830191 3830553 . - . ID=gene-AL42_RS22855;Name=AL42_RS22855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22855;old_locus_tag=AL42_03558 NZ_KK316784.1 Protein Homology CDS 3830191 3830553 . - 0 ID=cds-WP_003902478.1;Parent=gene-AL42_RS22855;Dbxref=GenBank:WP_003902478.1;Name=WP_003902478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217941.1;locus_tag=AL42_RS22855;product=hypothetical protein;protein_id=WP_003902478.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 3830716 3831245 . + . ID=gene-AL42_RS27025;Name=AL42_RS27025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS27025;pseudo=true NZ_KK316784.1 Protein Homology CDS 3830716 3831245 . + 0 ID=cds-AL42_RS27025;Parent=gene-AL42_RS27025;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177971.1;locus_tag=AL42_RS27025;product=PPE family protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 3831512 3832042 . + . ID=gene-AL42_RS22860;Name=AL42_RS22860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22860;old_locus_tag=AL42_03560 NZ_KK316784.1 Protein Homology CDS 3831512 3832042 . + 0 ID=cds-WP_003418122.1;Parent=gene-AL42_RS22860;Dbxref=GenBank:WP_003418122.1;Name=WP_003418122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012054359.1;locus_tag=AL42_RS22860;product=PPE family protein;protein_id=WP_003418122.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3832360 3833115 . - . ID=gene-AL42_RS22865;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=AL42_RS22865;old_locus_tag=AL42_03561 NZ_KK316784.1 Protein Homology CDS 3832360 3833115 . - 0 ID=cds-WP_003418125.1;Parent=gene-AL42_RS22865;Dbxref=GenBank:WP_003418125.1;Name=WP_003418125.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217944.1;locus_tag=AL42_RS22865;product=IS21-like element ISMt2 family helper ATPase IstB;protein_id=WP_003418125.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3833199 3834460 . - . ID=gene-AL42_RS22870;Name=AL42_RS22870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22870;old_locus_tag=AL42_03562 NZ_KK316784.1 Protein Homology CDS 3834172 3834460 . - 0 ID=cds-WP_087902221.1-12;Parent=gene-AL42_RS22870;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL42_RS22870;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316784.1 Protein Homology CDS 3833199 3834172 . - 2 ID=cds-WP_087902221.1-12;Parent=gene-AL42_RS22870;Dbxref=GenBank:WP_087902221.1;Name=WP_087902221.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558251.1;locus_tag=AL42_RS22870;product=IS3-like element IS6110/IS987 family transposase;protein_id=WP_087902221.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 3834544 3836083 . - . ID=gene-AL42_RS0105565;Name=istA;gbkey=Gene;gene=istA;gene_biotype=pseudogene;locus_tag=AL42_RS0105565;old_locus_tag=AL42_03564;partial=true;pseudo=true;start_range=.,3834544 NZ_KK316784.1 Protein Homology CDS 3834544 3836083 . - 0 ID=cds-AL42_RS0105565;Parent=gene-AL42_RS0105565;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_176223647.1;locus_tag=AL42_RS0105565;partial=true;product=IS21-like element ISMt2 family transposase;pseudo=true;start_range=.,3834544;transl_table=11 NZ_KK316784.1 RefSeq gene 3836599 3836898 . + . ID=gene-AL42_RS0105575;Name=AL42_RS0105575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0105575 NZ_KK316784.1 Protein Homology CDS 3836599 3836898 . + 0 ID=cds-WP_003902483.1;Parent=gene-AL42_RS0105575;Dbxref=GenBank:WP_003902483.1;Name=WP_003902483.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003901635.1;locus_tag=AL42_RS0105575;product=PE family protein;protein_id=WP_003902483.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3836984 3837526 . + . ID=gene-AL42_RS22875;Name=AL42_RS22875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22875;old_locus_tag=AL42_03565 NZ_KK316784.1 Protein Homology CDS 3836984 3837526 . + 0 ID=cds-WP_003418141.1;Parent=gene-AL42_RS22875;Dbxref=GenBank:WP_003418141.1;Name=WP_003418141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015294407.1;locus_tag=AL42_RS22875;product=PPE family protein;protein_id=WP_003418141.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3837617 3838012 . + . ID=gene-AL42_RS22880;Name=AL42_RS22880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22880;old_locus_tag=AL42_03566 NZ_KK316784.1 Protein Homology CDS 3837617 3838012 . + 0 ID=cds-WP_003418146.1;Parent=gene-AL42_RS22880;Dbxref=GenBank:WP_003418146.1;Name=WP_003418146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014001737.1;locus_tag=AL42_RS22880;product=PE/PPE C-terminal domain-containing protein;protein_id=WP_003418146.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3838039 3838164 . - . ID=gene-AL42_RS28200;Name=AL42_RS28200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS28200 NZ_KK316784.1 Protein Homology CDS 3838039 3838164 . - 0 ID=cds-WP_009940399.1;Parent=gene-AL42_RS28200;Dbxref=GenBank:WP_009940399.1;Name=WP_009940399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009940399.1;locus_tag=AL42_RS28200;product=hypothetical protein;protein_id=WP_009940399.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3838895 3839257 . - . ID=gene-AL42_RS26535;Name=AL42_RS26535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS26535 NZ_KK316784.1 Protein Homology CDS 3838895 3839257 . - 0 ID=cds-WP_003902478.1-2;Parent=gene-AL42_RS26535;Dbxref=GenBank:WP_003902478.1;Name=WP_003902478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217941.1;locus_tag=AL42_RS26535;product=hypothetical protein;protein_id=WP_003902478.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3839420 3839956 . + . ID=gene-AL42_RS22885;Name=AL42_RS22885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22885;old_locus_tag=AL42_03567 NZ_KK316784.1 Protein Homology CDS 3839420 3839956 . + 0 ID=cds-WP_003902485.1;Parent=gene-AL42_RS22885;Dbxref=GenBank:WP_003902485.1;Name=WP_003902485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177973.1;locus_tag=AL42_RS22885;product=PPE family protein;protein_id=WP_003902485.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 3840013 3841060 . - . ID=gene-AL42_RS22890;Name=AL42_RS22890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS22890;old_locus_tag=AL42_03568;pseudo=true NZ_KK316784.1 Protein Homology CDS 3840013 3841060 . - 0 ID=cds-AL42_RS22890;Parent=gene-AL42_RS22890;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558364.1;locus_tag=AL42_RS22890;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 3841099 3841254 . - . ID=gene-AL42_RS27030;Name=AL42_RS27030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27030 NZ_KK316784.1 Protein Homology CDS 3841099 3841254 . - 0 ID=cds-WP_003418266.1;Parent=gene-AL42_RS27030;Dbxref=GenBank:WP_003418266.1;Name=WP_003418266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009030046.1;locus_tag=AL42_RS27030;product=hypothetical protein;protein_id=WP_003418266.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3841279 3841434 . - . ID=gene-AL42_RS27320;Name=AL42_RS27320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27320 NZ_KK316784.1 GeneMarkS-2+ CDS 3841279 3841434 . - 0 ID=cds-WP_003917789.1;Parent=gene-AL42_RS27320;Dbxref=GenBank:WP_003917789.1;Name=WP_003917789.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL42_RS27320;product=hypothetical protein;protein_id=WP_003917789.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 3841561 3842409 . - . ID=gene-AL42_RS22895;Name=AL42_RS22895;end_range=3842409,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS22895;old_locus_tag=AL42_03569;partial=true;pseudo=true;start_range=.,3841561 NZ_KK316784.1 Protein Homology CDS 3841561 3842409 . - 0 ID=cds-AL42_RS22895;Parent=gene-AL42_RS22895;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0004803;end_range=3842409,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032488867.1;locus_tag=AL42_RS22895;partial=true;product=IS256 family transposase;pseudo=true;start_range=.,3841561;transl_table=11 NZ_KK316784.1 RefSeq gene 3842627 3844009 . - . ID=gene-AL42_RS22900;Name=gadB;gbkey=Gene;gene=gadB;gene_biotype=protein_coding;locus_tag=AL42_RS22900;old_locus_tag=AL42_03570 NZ_KK316784.1 Protein Homology CDS 3842627 3844009 . - 0 ID=cds-WP_003418277.1;Parent=gene-AL42_RS22900;Dbxref=GenBank:WP_003418277.1;Name=WP_003418277.1;Ontology_term=GO:0006540,GO:0004351,GO:0030170;gbkey=CDS;gene=gadB;go_function=glutamate decarboxylase activity|0004351||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyrate shunt|0006540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217949.1;locus_tag=AL42_RS22900;product=glutamate decarboxylase;protein_id=WP_003418277.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3844047 3845468 . - . ID=gene-AL42_RS22905;Name=AL42_RS22905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22905;old_locus_tag=AL42_03571 NZ_KK316784.1 Protein Homology CDS 3844047 3845468 . - 0 ID=cds-WP_003418280.1;Parent=gene-AL42_RS22905;Dbxref=GenBank:WP_003418280.1;Name=WP_003418280.1;Ontology_term=GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217950.1;locus_tag=AL42_RS22905;product=NAD(P)H-hydrate dehydratase;protein_id=WP_003418280.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3845470 3846183 . - . ID=gene-AL42_RS22910;Name=AL42_RS22910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22910;old_locus_tag=AL42_03572 NZ_KK316784.1 Protein Homology CDS 3845470 3846183 . - 0 ID=cds-WP_003418284.1;Parent=gene-AL42_RS22910;Dbxref=GenBank:WP_003418284.1;Name=WP_003418284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217951.1;locus_tag=AL42_RS22910;product=rhomboid-like protein;protein_id=WP_003418284.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3846194 3847048 . - . ID=gene-AL42_RS22915;Name=AL42_RS22915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22915;old_locus_tag=AL42_03573 NZ_KK316784.1 Protein Homology CDS 3846194 3847048 . - 0 ID=cds-WP_003901640.1;Parent=gene-AL42_RS22915;Dbxref=GenBank:WP_003901640.1;Name=WP_003901640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217952.1;locus_tag=AL42_RS22915;product=DUF4436 domain-containing protein;protein_id=WP_003901640.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3847270 3849144 . - . ID=gene-AL42_RS22920;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=AL42_RS22920;old_locus_tag=AL42_03574 NZ_KK316784.1 Protein Homology CDS 3847270 3849144 . - 0 ID=cds-WP_003418289.1;Parent=gene-AL42_RS22920;Dbxref=GenBank:WP_003418289.1;Name=WP_003418289.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217953.1;locus_tag=AL42_RS22920;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_003418289.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3849166 3849642 . + . ID=gene-AL42_RS22925;Name=AL42_RS22925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22925;old_locus_tag=AL42_03575 NZ_KK316784.1 Protein Homology CDS 3849166 3849642 . + 0 ID=cds-WP_003900057.1;Parent=gene-AL42_RS22925;Dbxref=GenBank:WP_003900057.1;Name=WP_003900057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217954.1;locus_tag=AL42_RS22925;product=DUF2510 domain-containing protein;protein_id=WP_003900057.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3849652 3850494 . + . ID=gene-AL42_RS22930;Name=AL42_RS22930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22930;old_locus_tag=AL42_03576 NZ_KK316784.1 Protein Homology CDS 3849652 3850494 . + 0 ID=cds-WP_003418298.1;Parent=gene-AL42_RS22930;Dbxref=GenBank:WP_003418298.1;Name=WP_003418298.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217955.1;locus_tag=AL42_RS22930;product=dienelactone hydrolase family protein;protein_id=WP_003418298.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3850514 3851917 . - . ID=gene-AL42_RS22935;Name=AL42_RS22935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22935;old_locus_tag=AL42_03577 NZ_KK316784.1 Protein Homology CDS 3850514 3851917 . - 0 ID=cds-WP_031721838.1;Parent=gene-AL42_RS22935;Dbxref=GenBank:WP_031721838.1;Name=WP_031721838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217956.1;locus_tag=AL42_RS22935;product=hypothetical protein;protein_id=WP_031721838.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3851920 3852231 . - . ID=gene-AL42_RS22940;Name=AL42_RS22940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22940;old_locus_tag=AL42_03578 NZ_KK316784.1 Protein Homology CDS 3851920 3852231 . - 0 ID=cds-WP_003418301.1;Parent=gene-AL42_RS22940;Dbxref=GenBank:WP_003418301.1;Name=WP_003418301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217957.1;locus_tag=AL42_RS22940;product=hypothetical protein;protein_id=WP_003418301.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3852279 3853625 . - . ID=gene-AL42_RS22945;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=AL42_RS22945;old_locus_tag=AL42_03579 NZ_KK316784.1 Protein Homology CDS 3852279 3853625 . - 0 ID=cds-WP_003418304.1;Parent=gene-AL42_RS22945;Dbxref=GenBank:WP_003418304.1;Name=WP_003418304.1;Ontology_term=GO:0005975,GO:0009252,GO:0000287,GO:0008966;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA;go_process=carbohydrate metabolic process|0005975||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217958.1;locus_tag=AL42_RS22945;product=phosphoglucosamine mutase;protein_id=WP_003418304.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3853750 3854205 . - . ID=gene-AL42_RS22950;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=AL42_RS22950;old_locus_tag=AL42_03580 NZ_KK316784.1 Protein Homology CDS 3853750 3854205 . - 0 ID=cds-WP_003418308.1;Parent=gene-AL42_RS22950;Dbxref=GenBank:WP_003418308.1;Name=WP_003418308.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217959.1;locus_tag=AL42_RS22950;product=30S ribosomal protein S9;protein_id=WP_003418308.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3854202 3854645 . - . ID=gene-AL42_RS22955;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=AL42_RS22955;old_locus_tag=AL42_03581 NZ_KK316784.1 Protein Homology CDS 3854202 3854645 . - 0 ID=cds-WP_003418312.1;Parent=gene-AL42_RS22955;Dbxref=GenBank:WP_003418312.1;Name=WP_003418312.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217960.1;locus_tag=AL42_RS22955;product=50S ribosomal protein L13;protein_id=WP_003418312.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3854878 3855180 . - . ID=gene-AL42_RS22960;Name=esxT;gbkey=Gene;gene=esxT;gene_biotype=protein_coding;locus_tag=AL42_RS22960;old_locus_tag=AL42_03582 NZ_KK316784.1 Protein Homology CDS 3854878 3855180 . - 0 ID=cds-WP_003900059.1;Parent=gene-AL42_RS22960;Dbxref=GenBank:WP_003900059.1;Name=WP_003900059.1;Ontology_term=GO:0005576;gbkey=CDS;gene=esxT;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217961.1;locus_tag=AL42_RS22960;product=WXG100 family type VII secretion target;protein_id=WP_003900059.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3855201 3855518 . - . ID=gene-AL42_RS22965;Name=esxU;gbkey=Gene;gene=esxU;gene_biotype=protein_coding;locus_tag=AL42_RS22965;old_locus_tag=AL42_03583 NZ_KK316784.1 Protein Homology CDS 3855201 3855518 . - 0 ID=cds-WP_014584922.1;Parent=gene-AL42_RS22965;Dbxref=GenBank:WP_014584922.1;Name=WP_014584922.1;gbkey=CDS;gene=esxU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217962.2;locus_tag=AL42_RS22965;product=type VII secretion system ESX-4 protein EsxU;protein_id=WP_014584922.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3855571 3856785 . - . ID=gene-AL42_RS22970;Name=AL42_RS22970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22970;old_locus_tag=AL42_03584 NZ_KK316784.1 Protein Homology CDS 3855571 3856785 . - 0 ID=cds-WP_003906107.1;Parent=gene-AL42_RS22970;Dbxref=GenBank:WP_003906107.1;Name=WP_003906107.1;Ontology_term=GO:0009306;gbkey=CDS;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217963.1;locus_tag=AL42_RS22970;product=type VII secretion-associated protein;protein_id=WP_003906107.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3856782 3860492 . - . ID=gene-AL42_RS22975;Name=eccC4;gbkey=Gene;gene=eccC4;gene_biotype=protein_coding;locus_tag=AL42_RS22975;old_locus_tag=AL42_03585 NZ_KK316784.1 Protein Homology CDS 3856782 3860492 . - 0 ID=cds-WP_003418326.1;Parent=gene-AL42_RS22975;Dbxref=GenBank:WP_003418326.1;Name=WP_003418326.1;gbkey=CDS;gene=eccC4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217964.1;locus_tag=AL42_RS22975;product=type VII secretion system ESX-4 FtsK/SpoIIIE family ATPase EccC4;protein_id=WP_003418326.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3860606 3862009 . + . ID=gene-AL42_RS22980;Name=eccD4;gbkey=Gene;gene=eccD4;gene_biotype=protein_coding;locus_tag=AL42_RS22980;old_locus_tag=AL42_03586 NZ_KK316784.1 Protein Homology CDS 3860606 3862009 . + 0 ID=cds-WP_003900062.1;Parent=gene-AL42_RS22980;Dbxref=GenBank:WP_003900062.1;Name=WP_003900062.1;gbkey=CDS;gene=eccD4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217965.1;locus_tag=AL42_RS22980;product=type VII secretion system ESX-4 subunit EccD4;protein_id=WP_003900062.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3862006 3863373 . + . ID=gene-AL42_RS22985;Name=mycP4;gbkey=Gene;gene=mycP4;gene_biotype=protein_coding;locus_tag=AL42_RS22985;old_locus_tag=AL42_03587 NZ_KK316784.1 Protein Homology CDS 3862006 3863373 . + 0 ID=cds-WP_003901645.1;Parent=gene-AL42_RS22985;Dbxref=GenBank:WP_003901645.1;Name=WP_003901645.1;gbkey=CDS;gene=mycP4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217966.1;locus_tag=AL42_RS22985;product=type VII secretion system ESX-4 serine protease mycosin MycP4;protein_id=WP_003901645.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3863338 3864750 . - . ID=gene-AL42_RS22990;Name=eccB4;gbkey=Gene;gene=eccB4;gene_biotype=protein_coding;locus_tag=AL42_RS22990;old_locus_tag=AL42_03588 NZ_KK316784.1 Protein Homology CDS 3863338 3864750 . - 0 ID=cds-WP_003418333.1;Parent=gene-AL42_RS22990;Dbxref=GenBank:WP_003418333.1;Name=WP_003418333.1;gbkey=CDS;gene=eccB4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217967.1;locus_tag=AL42_RS22990;product=type VII secretion system ESX-4 subunit EccB4;protein_id=WP_003418333.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3864871 3865659 . + . ID=gene-AL42_RS22995;Name=AL42_RS22995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS22995;old_locus_tag=AL42_03589 NZ_KK316784.1 Protein Homology CDS 3864871 3865659 . + 0 ID=cds-WP_003418336.1;Parent=gene-AL42_RS22995;Dbxref=GenBank:WP_003418336.1;Name=WP_003418336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217968.2;locus_tag=AL42_RS22995;product=cutinase family protein;protein_id=WP_003418336.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3865706 3866386 . + . ID=gene-AL42_RS23000;Name=cut4;gbkey=Gene;gene=cut4;gene_biotype=protein_coding;locus_tag=AL42_RS23000;old_locus_tag=AL42_03590 NZ_KK316784.1 Protein Homology CDS 3865706 3866386 . + 0 ID=cds-WP_003418339.1;Parent=gene-AL42_RS23000;Dbxref=GenBank:WP_003418339.1;Name=WP_003418339.1;gbkey=CDS;gene=cut4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217969.1;locus_tag=AL42_RS23000;product=cutinase Cut4;protein_id=WP_003418339.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3866658 3868343 . + . ID=gene-AL42_RS0105595;Name=AL42_RS0105595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0105595;old_locus_tag=AL42_03592 NZ_KK316784.1 Protein Homology CDS 3866658 3868343 . + 0 ID=cds-WP_003418342.1;Parent=gene-AL42_RS0105595;Dbxref=GenBank:WP_003418342.1;Name=WP_003418342.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016719627.1;locus_tag=AL42_RS0105595;product=purine-cytosine permease family protein;protein_id=WP_003418342.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3868305 3869198 . - . ID=gene-AL42_RS23005;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=AL42_RS23005;old_locus_tag=AL42_03593 NZ_KK316784.1 Protein Homology CDS 3868305 3869198 . - 0 ID=cds-WP_003418344.1;Parent=gene-AL42_RS23005;Dbxref=GenBank:WP_003418344.1;Name=WP_003418344.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003418344.1;locus_tag=AL42_RS23005;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_003418344.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3869143 3869685 . - . ID=gene-AL42_RS23010;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=AL42_RS23010;old_locus_tag=AL42_03594 NZ_KK316784.1 Protein Homology CDS 3869143 3869685 . - 0 ID=cds-WP_003418346.1;Parent=gene-AL42_RS23010;Dbxref=GenBank:WP_003418346.1;Name=WP_003418346.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217973.1;locus_tag=AL42_RS23010;product=50S ribosomal protein L17;protein_id=WP_003418346.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3869717 3870760 . - . ID=gene-AL42_RS23015;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=AL42_RS23015;old_locus_tag=AL42_03595 NZ_KK316784.1 Protein Homology CDS 3869717 3870760 . - 0 ID=cds-WP_003418351.1;Parent=gene-AL42_RS23015;Dbxref=GenBank:WP_003418351.1;Name=WP_003418351.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;gene=rpoA;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217974.1;locus_tag=AL42_RS23015;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_003418351.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3870912 3871517 . - . ID=gene-AL42_RS23020;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=AL42_RS23020;old_locus_tag=AL42_03596 NZ_KK316784.1 Protein Homology CDS 3870912 3871517 . - 0 ID=cds-WP_003418354.1;Parent=gene-AL42_RS23020;Dbxref=GenBank:WP_003418354.1;Name=WP_003418354.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217975.1;locus_tag=AL42_RS23020;product=30S ribosomal protein S4;protein_id=WP_003418354.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3871526 3871945 . - . ID=gene-AL42_RS23025;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=AL42_RS23025;old_locus_tag=AL42_03597 NZ_KK316784.1 Protein Homology CDS 3871526 3871945 . - 0 ID=cds-WP_003900064.1;Parent=gene-AL42_RS23025;Dbxref=GenBank:WP_003900064.1;Name=WP_003900064.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217976.1;locus_tag=AL42_RS23025;product=30S ribosomal protein S11;protein_id=WP_003900064.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3871949 3872323 . - . ID=gene-AL42_RS23030;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=AL42_RS23030;old_locus_tag=AL42_03598 NZ_KK316784.1 Protein Homology CDS 3871949 3872323 . - 0 ID=cds-WP_003418360.1;Parent=gene-AL42_RS23030;Dbxref=GenBank:WP_003418360.1;Name=WP_003418360.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217977.1;locus_tag=AL42_RS23030;product=30S ribosomal protein S13;protein_id=WP_003418360.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3872596 3872709 . - . ID=gene-AL42_RS23035;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=AL42_RS23035;old_locus_tag=AL42_03599 NZ_KK316784.1 Protein Homology CDS 3872596 3872709 . - 0 ID=cds-WP_003418367.1;Parent=gene-AL42_RS23035;Dbxref=GenBank:WP_003418367.1;Name=WP_003418367.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217978.1;locus_tag=AL42_RS23035;product=50S ribosomal protein L36;protein_id=WP_003418367.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3872742 3872963 . - . ID=gene-AL42_RS23040;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=AL42_RS23040;old_locus_tag=AL42_03600 NZ_KK316784.1 Protein Homology CDS 3872742 3872963 . - 0 ID=cds-WP_003418601.1;Parent=gene-AL42_RS23040;Dbxref=GenBank:WP_003418601.1;Name=WP_003418601.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012039277.1;locus_tag=AL42_RS23040;product=translation initiation factor IF-1;protein_id=WP_003418601.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3873217 3874074 . + . ID=gene-AL42_RS23045;Name=AL42_RS23045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23045;old_locus_tag=AL42_03601 NZ_KK316784.1 Protein Homology CDS 3873217 3874074 . + 0 ID=cds-WP_003418604.1;Parent=gene-AL42_RS23045;Dbxref=GenBank:WP_003418604.1;Name=WP_003418604.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217980.1;locus_tag=AL42_RS23045;product=LLM class F420-dependent oxidoreductase;protein_id=WP_003418604.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3874147 3875142 . + . ID=gene-AL42_RS23050;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=AL42_RS23050;old_locus_tag=AL42_03602 NZ_KK316784.1 Protein Homology CDS 3874147 3875142 . + 0 ID=cds-WP_003418607.1;Parent=gene-AL42_RS23050;Dbxref=GenBank:WP_003418607.1;Name=WP_003418607.1;Ontology_term=GO:0009225,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217981.1;locus_tag=AL42_RS23050;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_003418607.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3875144 3875752 . + . ID=gene-AL42_RS23055;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=AL42_RS23055;old_locus_tag=AL42_03603 NZ_KK316784.1 Protein Homology CDS 3875144 3875752 . + 0 ID=cds-WP_003906113.1;Parent=gene-AL42_RS23055;Dbxref=GenBank:WP_003906113.1;Name=WP_003906113.1;Ontology_term=GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217982.1;locus_tag=AL42_RS23055;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WP_003906113.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 3875835 3877227 . + . ID=gene-AL42_RS23060;Name=AL42_RS23060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS23060;old_locus_tag=AL42_03605;pseudo=true NZ_KK316784.1 Protein Homology CDS 3875835 3877227 . + 0 ID=cds-AL42_RS23060;Parent=gene-AL42_RS23060;Note=frameshifted;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014001758.1;locus_tag=AL42_RS23060;product=HNH endonuclease signature motif containing protein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 3877285 3878358 . - . ID=gene-AL42_RS23065;Name=AL42_RS23065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23065;old_locus_tag=AL42_03606 NZ_KK316784.1 Protein Homology CDS 3877285 3878358 . - 0 ID=cds-WP_003913065.1;Parent=gene-AL42_RS23065;Dbxref=GenBank:WP_003913065.1;Name=WP_003913065.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003914158.1;locus_tag=AL42_RS23065;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_003913065.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3878383 3879393 . - . ID=gene-AL42_RS23070;Name=mhpE;gbkey=Gene;gene=mhpE;gene_biotype=protein_coding;locus_tag=AL42_RS23070;old_locus_tag=AL42_03607 NZ_KK316784.1 Protein Homology CDS 3878383 3879393 . - 0 ID=cds-WP_003900067.1;Parent=gene-AL42_RS23070;Dbxref=GenBank:WP_003900067.1;Name=WP_003900067.1;gbkey=CDS;gene=mhpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217986.1;locus_tag=AL42_RS23070;product=4-hydroxy-2-oxovalerate aldolase;protein_id=WP_003900067.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3879454 3881112 . - . ID=gene-AL42_RS23075;Name=AL42_RS23075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23075;old_locus_tag=AL42_03608 NZ_KK316784.1 Protein Homology CDS 3879454 3881112 . - 0 ID=cds-WP_003900704.1;Parent=gene-AL42_RS23075;Dbxref=GenBank:WP_003900704.1;Name=WP_003900704.1;Ontology_term=GO:0009097,GO:0009099,GO:0000287,GO:0030976,GO:0050660,GO:0005948;gbkey=CDS;go_component=acetolactate synthase complex|0005948||IEA;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=isoleucine biosynthetic process|0009097||IEA,L-valine biosynthetic process|0009099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217987.1;locus_tag=AL42_RS23075;product=thiamine pyrophosphate-binding protein;protein_id=WP_003900704.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3881118 3881507 . - . ID=gene-AL42_RS23080;Name=AL42_RS23080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23080;old_locus_tag=AL42_03609 NZ_KK316784.1 Protein Homology CDS 3881118 3881507 . - 0 ID=cds-WP_003900069.1;Parent=gene-AL42_RS23080;Dbxref=GenBank:WP_003900069.1;Name=WP_003900069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900069.1;locus_tag=AL42_RS23080;product=cupin domain-containing protein;protein_id=WP_003900069.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3881672 3882178 . + . ID=gene-AL42_RS23085;Name=AL42_RS23085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23085;old_locus_tag=AL42_03610 NZ_KK316784.1 Protein Homology CDS 3881672 3882178 . + 0 ID=cds-WP_003418774.1;Parent=gene-AL42_RS23085;Dbxref=GenBank:WP_003418774.1;Name=WP_003418774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217989.1;locus_tag=AL42_RS23085;product=nuclear transport factor 2 family protein;protein_id=WP_003418774.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3882258 3883160 . - . ID=gene-AL42_RS23090;Name=AL42_RS23090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23090;old_locus_tag=AL42_03611 NZ_KK316784.1 Protein Homology CDS 3882258 3883160 . - 0 ID=cds-WP_003913481.1;Parent=gene-AL42_RS23090;Dbxref=GenBank:WP_003913481.1;Name=WP_003913481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003913481.1;locus_tag=AL42_RS23090;product=alpha/beta fold hydrolase;protein_id=WP_003913481.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3883323 3884672 . - . ID=gene-AL42_RS23095;Name=kgtP;gbkey=Gene;gene=kgtP;gene_biotype=protein_coding;locus_tag=AL42_RS23095;old_locus_tag=AL42_03612 NZ_KK316784.1 Protein Homology CDS 3883323 3884672 . - 0 ID=cds-WP_003901651.1;Parent=gene-AL42_RS23095;Dbxref=GenBank:WP_003901651.1;Name=WP_003901651.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=kgtP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003901651.1;locus_tag=AL42_RS23095;product=MFS transporter;protein_id=WP_003901651.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3885045 3885341 . + . ID=gene-AL42_RS23100;Name=AL42_RS23100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23100;old_locus_tag=AL42_03613 NZ_KK316784.1 Protein Homology CDS 3885045 3885341 . + 0 ID=cds-WP_003418781.1;Parent=gene-AL42_RS23100;Dbxref=GenBank:WP_003418781.1;Name=WP_003418781.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177975.1;locus_tag=AL42_RS23100;product=PE family protein;protein_id=WP_003418781.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3885378 3886559 . + . ID=gene-AL42_RS23105;Name=AL42_RS23105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23105;old_locus_tag=AL42_03614 NZ_KK316784.1 Protein Homology CDS 3885378 3886559 . + 0 ID=cds-WP_003902494.1;Parent=gene-AL42_RS23105;Dbxref=GenBank:WP_003902494.1;Name=WP_003902494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177976.1;locus_tag=AL42_RS23105;product=PPE family protein PPE60;protein_id=WP_003902494.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3886589 3889837 . + . ID=gene-AL42_RS23110;Name=AL42_RS23110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23110;old_locus_tag=AL42_03615 NZ_KK316784.1 Protein Homology CDS 3886589 3889837 . + 0 ID=cds-WP_151845102.1;Parent=gene-AL42_RS23110;Dbxref=GenBank:WP_151845102.1;Name=WP_151845102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003915396.1;locus_tag=AL42_RS23110;product=patatin-like protein;protein_id=WP_151845102.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3889861 3891354 . - . ID=gene-AL42_RS23115;Name=AL42_RS23115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23115;old_locus_tag=AL42_03616 NZ_KK316784.1 Protein Homology CDS 3889861 3891354 . - 0 ID=cds-WP_003418921.1;Parent=gene-AL42_RS23115;Dbxref=GenBank:WP_003418921.1;Name=WP_003418921.1;Ontology_term=GO:0045017,GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;go_process=glycerolipid biosynthetic process|0045017||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217997.1;locus_tag=AL42_RS23115;product=WS/DGAT/MGAT family O-acyltransferase;protein_id=WP_003418921.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3891445 3892134 . - . ID=gene-AL42_RS23120;Name=AL42_RS23120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23120;old_locus_tag=AL42_03617 NZ_KK316784.1 Protein Homology CDS 3891445 3892134 . - 0 ID=cds-WP_003418922.1;Parent=gene-AL42_RS23120;Dbxref=GenBank:WP_003418922.1;Name=WP_003418922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217998.1;locus_tag=AL42_RS23120;product=GAP family protein;protein_id=WP_003418922.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3892276 3893058 . - . ID=gene-AL42_RS23125;Name=AL42_RS23125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23125;old_locus_tag=AL42_03618 NZ_KK316784.1 Protein Homology CDS 3892276 3893058 . - 0 ID=cds-WP_003418925.1;Parent=gene-AL42_RS23125;Dbxref=GenBank:WP_003418925.1;Name=WP_003418925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217999.1;locus_tag=AL42_RS23125;product=DUF2510 domain-containing protein;protein_id=WP_003418925.1;transl_table=11 NZ_KK316784.1 RefSeq pseudogene 3893102 3893765 . - . ID=gene-AL42_RS23130;Name=AL42_RS23130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS23130;old_locus_tag=AL42_03619;pseudo=true NZ_KK316784.1 Protein Homology CDS 3893102 3893765 . - 0 ID=cds-AL42_RS23130;Parent=gene-AL42_RS23130;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218000.1;locus_tag=AL42_RS23130;product=LppP/LprE family lipoprotein;pseudo=true;transl_table=11 NZ_KK316784.1 RefSeq gene 3894031 3895569 . + . ID=gene-AL42_RS23135;Name=cpsA;gbkey=Gene;gene=cpsA;gene_biotype=protein_coding;locus_tag=AL42_RS23135;old_locus_tag=AL42_03620 NZ_KK316784.1 Protein Homology CDS 3894031 3895569 . + 0 ID=cds-WP_003900866.1;Parent=gene-AL42_RS23135;Dbxref=GenBank:WP_003900866.1;Name=WP_003900866.1;Ontology_term=GO:0070726,GO:0071555,GO:0005886;gbkey=CDS;gene=cpsA;go_component=plasma membrane|0005886||IEA;go_process=cell wall assembly|0070726||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218001.1;locus_tag=AL42_RS23135;product=LCP family protein;protein_id=WP_003900866.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3895575 3896405 . - . ID=gene-AL42_RS23140;Name=AL42_RS23140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23140;old_locus_tag=AL42_03621 NZ_KK316784.1 Protein Homology CDS 3895575 3896405 . - 0 ID=cds-WP_003912250.1;Parent=gene-AL42_RS23140;Dbxref=GenBank:WP_003912250.1;Name=WP_003912250.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912250.1;locus_tag=AL42_RS23140;product=SDR family oxidoreductase;protein_id=WP_003912250.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3896725 3897174 . + . ID=gene-AL42_RS23145;Name=AL42_RS23145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23145;old_locus_tag=AL42_03622 NZ_KK316784.1 Protein Homology CDS 3896725 3897174 . + 0 ID=cds-WP_003418942.1;Parent=gene-AL42_RS23145;Dbxref=GenBank:WP_003418942.1;Name=WP_003418942.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218003.1;locus_tag=AL42_RS23145;product=DoxX family protein;protein_id=WP_003418942.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3897127 3898257 . - . ID=gene-AL42_RS23150;Name=lipF;gbkey=Gene;gene=lipF;gene_biotype=protein_coding;locus_tag=AL42_RS23150;old_locus_tag=AL42_03623 NZ_KK316784.1 Protein Homology CDS 3897127 3898257 . - 0 ID=cds-WP_014585415.1;Parent=gene-AL42_RS23150;Dbxref=GenBank:WP_014585415.1;Name=WP_014585415.1;gbkey=CDS;gene=lipF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912251.1;locus_tag=AL42_RS23150;product=carboxylesterase LipF;protein_id=WP_014585415.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3898620 3898943 . + . ID=gene-AL42_RS23155;Name=AL42_RS23155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23155;old_locus_tag=AL42_03624 NZ_KK316784.1 Protein Homology CDS 3898620 3898943 . + 0 ID=cds-WP_003418948.1;Parent=gene-AL42_RS23155;Dbxref=GenBank:WP_003418948.1;Name=WP_003418948.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218005.1;locus_tag=AL42_RS23155;product=Rv3488 family transcriptional regulator;protein_id=WP_003418948.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3899025 3899189 . + . ID=gene-AL42_RS23160;Name=AL42_RS23160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23160;old_locus_tag=AL42_03625 NZ_KK316784.1 Protein Homology CDS 3899025 3899189 . + 0 ID=cds-WP_003418950.1;Parent=gene-AL42_RS23160;Dbxref=GenBank:WP_003418950.1;Name=WP_003418950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218006.1;locus_tag=AL42_RS23160;product=hypothetical protein;protein_id=WP_003418950.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3899189 3900691 . + . ID=gene-AL42_RS23165;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=AL42_RS23165;old_locus_tag=AL42_03626 NZ_KK316784.1 Protein Homology CDS 3899189 3900691 . + 0 ID=cds-WP_003911019.1;Parent=gene-AL42_RS23165;Dbxref=GenBank:WP_003911019.1;Name=WP_003911019.1;gbkey=CDS;gene=otsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218007.1;locus_tag=AL42_RS23165;product=trehalose-6-phosphate synthase;protein_id=WP_003911019.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3900843 3901421 . + . ID=gene-AL42_RS23170;Name=AL42_RS23170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23170;old_locus_tag=AL42_03627 NZ_KK316784.1 Protein Homology CDS 3900843 3901421 . + 0 ID=cds-WP_003418954.1;Parent=gene-AL42_RS23170;Dbxref=GenBank:WP_003418954.1;Name=WP_003418954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218008.1;locus_tag=AL42_RS23170;product=hypothetical protein;protein_id=WP_003418954.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3901418 3901900 . - . ID=gene-AL42_RS23175;Name=AL42_RS23175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23175;old_locus_tag=AL42_03628 NZ_KK316784.1 Protein Homology CDS 3901418 3901900 . - 0 ID=cds-WP_003418958.1;Parent=gene-AL42_RS23175;Dbxref=GenBank:WP_003418958.1;Name=WP_003418958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218009.1;locus_tag=AL42_RS23175;product=Mce associated protein;protein_id=WP_003418958.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3901900 3902628 . - . ID=gene-AL42_RS23180;Name=AL42_RS23180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23180;old_locus_tag=AL42_03629 NZ_KK316784.1 Protein Homology CDS 3901900 3902628 . - 0 ID=cds-WP_003418960.1;Parent=gene-AL42_RS23180;Dbxref=GenBank:WP_003418960.1;Name=WP_003418960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218010.1;locus_tag=AL42_RS23180;product=mammalian cell entry protein;protein_id=WP_003418960.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3902628 3904322 . - . ID=gene-AL42_RS23185;Name=AL42_RS23185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23185;old_locus_tag=AL42_03630 NZ_KK316784.1 Protein Homology CDS 3902628 3904322 . - 0 ID=cds-WP_003418963.1;Parent=gene-AL42_RS23185;Dbxref=GenBank:WP_003418963.1;Name=WP_003418963.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218011.1;locus_tag=AL42_RS23185;product=virulence factor Mce family protein;protein_id=WP_003418963.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3904333 3905487 . - . ID=gene-AL42_RS23190;Name=lprN;gbkey=Gene;gene=lprN;gene_biotype=protein_coding;locus_tag=AL42_RS23190;old_locus_tag=AL42_03631 NZ_KK316784.1 Protein Homology CDS 3904333 3905487 . - 0 ID=cds-WP_003418964.1;Parent=gene-AL42_RS23190;Dbxref=GenBank:WP_003418964.1;Name=WP_003418964.1;gbkey=CDS;gene=lprN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218012.1;locus_tag=AL42_RS23190;product=Mce family lipoprotein LprN;protein_id=WP_003418964.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3905484 3906839 . - . ID=gene-AL42_RS23195;Name=AL42_RS23195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23195;old_locus_tag=AL42_03632 NZ_KK316784.1 Protein Homology CDS 3905484 3906839 . - 0 ID=cds-WP_003418966.1;Parent=gene-AL42_RS23195;Dbxref=GenBank:WP_003418966.1;Name=WP_003418966.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218013.1;locus_tag=AL42_RS23195;product=virulence factor Mce family protein;protein_id=WP_003418966.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3906836 3907909 . - . ID=gene-AL42_RS23200;Name=AL42_RS23200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23200;old_locus_tag=AL42_03633 NZ_KK316784.1 Protein Homology CDS 3906836 3907909 . - 0 ID=cds-WP_003906120.1;Parent=gene-AL42_RS23200;Dbxref=GenBank:WP_003906120.1;Name=WP_003906120.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218014.1;locus_tag=AL42_RS23200;product=virulence factor Mce family protein;protein_id=WP_003906120.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3907899 3908951 . - . ID=gene-AL42_RS23205;Name=AL42_RS23205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23205;old_locus_tag=AL42_03634 NZ_KK316784.1 Protein Homology CDS 3907899 3908951 . - 0 ID=cds-WP_003418972.1;Parent=gene-AL42_RS23205;Dbxref=GenBank:WP_003418972.1;Name=WP_003418972.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218015.1;locus_tag=AL42_RS23205;product=virulence factor Mce family protein;protein_id=WP_003418972.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3908951 3910153 . - . ID=gene-AL42_RS23210;Name=mce4A;gbkey=Gene;gene=mce4A;gene_biotype=protein_coding;locus_tag=AL42_RS23210;old_locus_tag=AL42_03635 NZ_KK316784.1 Protein Homology CDS 3908951 3910153 . - 0 ID=cds-WP_003418979.1;Parent=gene-AL42_RS23210;Dbxref=GenBank:WP_003418979.1;Name=WP_003418979.1;gbkey=CDS;gene=mce4A;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177977.1;locus_tag=AL42_RS23210;product=virulence factor Mce4A;protein_id=WP_003418979.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3910173 3911015 . - . ID=gene-AL42_RS23215;Name=AL42_RS23215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23215;old_locus_tag=AL42_03636 NZ_KK316784.1 Protein Homology CDS 3910173 3911015 . - 0 ID=cds-WP_003418983.1;Parent=gene-AL42_RS23215;Dbxref=GenBank:WP_003418983.1;Name=WP_003418983.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218017.1;locus_tag=AL42_RS23215;product=ABC transporter permease;protein_id=WP_003418983.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3911050 3911814 . - . ID=gene-AL42_RS23220;Name=AL42_RS23220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23220;old_locus_tag=AL42_03637 NZ_KK316784.1 Protein Homology CDS 3911050 3911814 . - 0 ID=cds-WP_003418986.1;Parent=gene-AL42_RS23220;Dbxref=GenBank:WP_003418986.1;Name=WP_003418986.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218018.1;locus_tag=AL42_RS23220;product=MlaE family ABC transporter permease;protein_id=WP_003418986.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3912040 3912993 . - . ID=gene-AL42_RS23225;Name=AL42_RS23225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23225;old_locus_tag=AL42_03638 NZ_KK316784.1 Protein Homology CDS 3912040 3912993 . - 0 ID=cds-WP_003418990.1;Parent=gene-AL42_RS23225;Dbxref=GenBank:WP_003418990.1;Name=WP_003418990.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218019.1;locus_tag=AL42_RS23225;product=3-oxoacyl-ACP reductase;protein_id=WP_003418990.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3913018 3913209 . - . ID=gene-AL42_RS23230;Name=fdxD;gbkey=Gene;gene=fdxD;gene_biotype=protein_coding;locus_tag=AL42_RS23230;old_locus_tag=AL42_03639 NZ_KK316784.1 Protein Homology CDS 3913018 3913209 . - 0 ID=cds-WP_003418993.1;Parent=gene-AL42_RS23230;Dbxref=GenBank:WP_003418993.1;Name=WP_003418993.1;Ontology_term=GO:0005506,GO:0009055,GO:0051536;gbkey=CDS;gene=fdxD;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218020.1;locus_tag=AL42_RS23230;product=ferredoxin;protein_id=WP_003418993.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3913424 3914626 . + . ID=gene-AL42_RS23235;Name=AL42_RS23235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23235;old_locus_tag=AL42_03640 NZ_KK316784.1 Protein Homology CDS 3913424 3914626 . + 0 ID=cds-WP_003418997.1;Parent=gene-AL42_RS23235;Dbxref=GenBank:WP_003418997.1;Name=WP_003418997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218021.1;locus_tag=AL42_RS23235;product=acyl-CoA dehydrogenase;protein_id=WP_003418997.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3914651 3915772 . + . ID=gene-AL42_RS23240;Name=AL42_RS23240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23240;old_locus_tag=AL42_03641 NZ_KK316784.1 Protein Homology CDS 3914651 3915772 . + 0 ID=cds-WP_003419000.1;Parent=gene-AL42_RS23240;Dbxref=GenBank:WP_003419000.1;Name=WP_003419000.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218022.1;locus_tag=AL42_RS23240;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003419000.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3915843 3917351 . + . ID=gene-AL42_RS23245;Name=fadD17;gbkey=Gene;gene=fadD17;gene_biotype=protein_coding;locus_tag=AL42_RS23245;old_locus_tag=AL42_03642 NZ_KK316784.1 Protein Homology CDS 3915843 3917351 . + 0 ID=cds-WP_003901655.1;Parent=gene-AL42_RS23245;Dbxref=GenBank:WP_003901655.1;Name=WP_003901655.1;gbkey=CDS;gene=fadD17;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218023.1;locus_tag=AL42_RS23245;product=long-chain-fatty-acid--CoA ligase FadD17;protein_id=WP_003901655.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3917522 3921673 . + . ID=gene-AL42_RS23250;Name=AL42_RS23250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23250;old_locus_tag=AL42_03643 NZ_KK316784.1 Protein Homology CDS 3917522 3921673 . + 0 ID=cds-WP_031721929.1;Parent=gene-AL42_RS23250;Dbxref=GenBank:WP_031721929.1;Name=WP_031721929.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177978.1;locus_tag=AL42_RS23250;product=PE family protein;protein_id=WP_031721929.1;transl_table=11 NZ_KK316784.1 RefSeq gene 3921964 3922361 . + . ID=gene-AL42_RS0105600;Name=AL42_RS0105600;end_range=3922361,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0105600;partial=true NZ_KK316784.1 Protein Homology CDS 3921964 3922361 . + 0 ID=cds-WP_031687470.1;Parent=gene-AL42_RS0105600;Dbxref=GenBank:WP_031687470.1;Name=WP_031687470.1;Ontology_term=GO:0005576,GO:0009986;end_range=3922361,.;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177982.1;locus_tag=AL42_RS0105600;partial=true;product=PE family protein;protein_id=WP_031687470.1;transl_table=11 ##sequence-region NZ_KK316785.1 1 480565 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1448421 NZ_KK316785.1 RefSeq region 1 480565 . + . ID=NZ_KK316785.1:1..480565;Dbxref=taxon:1448421;collection-date=2013-04-02;country=South Africa: Durban Chest Clinic;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Homo sapiens;strain=TKK_03_0083 NZ_KK316785.1 RefSeq gene 17 3371 . + . ID=gene-AL42_RS0105635;Name=AL42_RS0105635;end_range=3371,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0105635;old_locus_tag=AL42_03644;partial=true NZ_KK316785.1 Protein Homology CDS 17 3371 . + 0 ID=cds-WP_031721932.1;Parent=gene-AL42_RS0105635;Dbxref=GenBank:WP_031721932.1;Name=WP_031721932.1;Ontology_term=GO:0005576,GO:0009986;end_range=3371,.;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177979.1;locus_tag=AL42_RS0105635;partial=true;product=PE family protein;protein_id=WP_031721932.1;transl_table=11 NZ_KK316785.1 RefSeq pseudogene 5396 6266 . + . ID=gene-AL42_RS23260;Name=AL42_RS23260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS23260;old_locus_tag=AL42_03645;partial=true;pseudo=true;start_range=.,5396 NZ_KK316785.1 Protein Homology CDS 5396 6266 . + 1 ID=cds-AL42_RS23260;Parent=gene-AL42_RS23260;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177847.1;locus_tag=AL42_RS23260;partial=true;product=PE family protein;pseudo=true;start_range=.,5396;transl_table=11 NZ_KK316785.1 RefSeq gene 6433 7980 . - . ID=gene-AL42_RS23265;Name=ilvX;gbkey=Gene;gene=ilvX;gene_biotype=protein_coding;locus_tag=AL42_RS23265;old_locus_tag=AL42_03646 NZ_KK316785.1 Protein Homology CDS 6433 7980 . - 0 ID=cds-WP_003900872.1;Parent=gene-AL42_RS23265;Dbxref=GenBank:WP_003900872.1;Name=WP_003900872.1;Ontology_term=GO:0003824,GO:0030976;gbkey=CDS;gene=ilvX;go_function=catalytic activity|0003824||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218026.1;locus_tag=AL42_RS23265;product=acetolactate synthase large subunit;protein_id=WP_003900872.1;transl_table=11 NZ_KK316785.1 RefSeq gene 7977 8813 . - . ID=gene-AL42_RS23270;Name=AL42_RS23270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23270;old_locus_tag=AL42_03647 NZ_KK316785.1 Protein Homology CDS 7977 8813 . - 0 ID=cds-WP_003421145.1;Parent=gene-AL42_RS23270;Dbxref=GenBank:WP_003421145.1;Name=WP_003421145.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218027.1;locus_tag=AL42_RS23270;product=amidohydrolase family protein;protein_id=WP_003421145.1;transl_table=11 NZ_KK316785.1 RefSeq gene 9173 10927 . + . ID=gene-AL42_RS0105645;Name=AL42_RS0105645;end_range=10927,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0105645;old_locus_tag=AL42_03648;partial=true NZ_KK316785.1 Protein Homology CDS 9173 10927 . + 0 ID=cds-WP_031651828.1;Parent=gene-AL42_RS0105645;Dbxref=GenBank:WP_031651828.1;Name=WP_031651828.1;Ontology_term=GO:0005576,GO:0009986;end_range=10927,.;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177980.1;locus_tag=AL42_RS0105645;partial=true;product=PE family protein;protein_id=WP_031651828.1;transl_table=11 NZ_KK316785.1 RefSeq gene 13558 16423 . + . ID=gene-AL42_RS27785;Name=AL42_RS27785;end_range=16423,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27785;old_locus_tag=AL42_03649;partial=true;start_range=.,13558 NZ_KK316785.1 Protein Homology CDS 13558 16423 . + 0 ID=cds-WP_250602750.1;Parent=gene-AL42_RS27785;Dbxref=GenBank:WP_250602750.1;Name=WP_250602750.1;end_range=16423,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011799358.1;locus_tag=AL42_RS27785;partial=true;product=hypothetical protein;protein_id=WP_250602750.1;start_range=.,13558;transl_table=11 NZ_KK316785.1 RefSeq pseudogene 16741 17010 . - . ID=gene-AL42_RS27330;Name=AL42_RS27330;end_range=17010,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS27330;partial=true;pseudo=true;start_range=.,16741 NZ_KK316785.1 Protein Homology CDS 16741 17010 . - 0 ID=cds-AL42_RS27330;Parent=gene-AL42_RS27330;Note=activates fatty acids by binding to coenzyme A%3B in Mycobacterium may be involved in virulence%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=17010,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177983.1;locus_tag=AL42_RS27330;partial=true;product=acyl-CoA synthetase;pseudo=true;start_range=.,16741;transl_table=11 NZ_KK316785.1 RefSeq gene 17206 19584 . + . ID=gene-AL42_RS23285;Name=AL42_RS23285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23285;old_locus_tag=AL42_03651 NZ_KK316785.1 Protein Homology CDS 17206 19584 . + 0 ID=cds-WP_031662697.1;Parent=gene-AL42_RS23285;Dbxref=GenBank:WP_031662697.1;Name=WP_031662697.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014830026.1;locus_tag=AL42_RS23285;product=PE family protein;protein_id=WP_031662697.1;transl_table=11 NZ_KK316785.1 RefSeq gene 20145 21791 . - . ID=gene-AL42_RS23290;Name=AL42_RS23290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23290;old_locus_tag=AL42_03652 NZ_KK316785.1 Protein Homology CDS 20145 21791 . - 0 ID=cds-WP_003911024.1;Parent=gene-AL42_RS23290;Dbxref=GenBank:WP_003911024.1;Name=WP_003911024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177983.1;locus_tag=AL42_RS23290;product=acyl-CoA synthetase;protein_id=WP_003911024.1;transl_table=11 NZ_KK316785.1 RefSeq gene 21865 22656 . + . ID=gene-AL42_RS23295;Name=AL42_RS23295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23295;old_locus_tag=AL42_03653 NZ_KK316785.1 Protein Homology CDS 21865 22656 . + 0 ID=cds-WP_003419179.1;Parent=gene-AL42_RS23295;Dbxref=GenBank:WP_003419179.1;Name=WP_003419179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218033.1;locus_tag=AL42_RS23295;product=crotonase/enoyl-CoA hydratase family protein;protein_id=WP_003419179.1;transl_table=11 NZ_KK316785.1 RefSeq gene 22752 23591 . + . ID=gene-AL42_RS23300;Name=AL42_RS23300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23300;old_locus_tag=AL42_03654 NZ_KK316785.1 Protein Homology CDS 22752 23591 . + 0 ID=cds-WP_003419184.1;Parent=gene-AL42_RS23300;Dbxref=GenBank:WP_003419184.1;Name=WP_003419184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218034.1;locus_tag=AL42_RS23300;product=hypothetical protein;protein_id=WP_003419184.1;transl_table=11 NZ_KK316785.1 RefSeq gene 23646 24842 . - . ID=gene-AL42_RS23305;Name=cyp142;gbkey=Gene;gene=cyp142;gene_biotype=protein_coding;locus_tag=AL42_RS23305;old_locus_tag=AL42_03655 NZ_KK316785.1 Protein Homology CDS 23646 24842 . - 0 ID=cds-WP_003900082.1;Parent=gene-AL42_RS23305;Dbxref=GenBank:WP_003900082.1;Name=WP_003900082.1;gbkey=CDS;gene=cyp142;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218035.1;locus_tag=AL42_RS23305;product=steroid C26-monooxygenase Cyp142;protein_id=WP_003900082.1;transl_table=11 NZ_KK316785.1 RefSeq gene 24871 25581 . + . ID=gene-AL42_RS23310;Name=AL42_RS23310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23310;old_locus_tag=AL42_03656 NZ_KK316785.1 Protein Homology CDS 24871 25581 . + 0 ID=cds-WP_003419190.1;Parent=gene-AL42_RS23310;Dbxref=GenBank:WP_003419190.1;Name=WP_003419190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218036.1;locus_tag=AL42_RS23310;product=acetoacetate decarboxylase family protein;protein_id=WP_003419190.1;transl_table=11 NZ_KK316785.1 RefSeq gene 25646 26677 . - . ID=gene-AL42_RS23315;Name=AL42_RS23315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23315;old_locus_tag=AL42_03657 NZ_KK316785.1 Protein Homology CDS 25646 26677 . - 0 ID=cds-WP_003419192.1;Parent=gene-AL42_RS23315;Dbxref=GenBank:WP_003419192.1;Name=WP_003419192.1;Ontology_term=GO:0016491,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015628990.1;locus_tag=AL42_RS23315;product=LLM class F420-dependent oxidoreductase;protein_id=WP_003419192.1;transl_table=11 NZ_KK316785.1 RefSeq gene 26749 27753 . + . ID=gene-AL42_RS23320;Name=AL42_RS23320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23320;old_locus_tag=AL42_03658 NZ_KK316785.1 Protein Homology CDS 26749 27753 . + 0 ID=cds-WP_003900085.1;Parent=gene-AL42_RS23320;Dbxref=GenBank:WP_003900085.1;Name=WP_003900085.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017487624.1;locus_tag=AL42_RS23320;product=Zn-ribbon domain-containing OB-fold protein;protein_id=WP_003900085.1;transl_table=11 NZ_KK316785.1 RefSeq gene 27769 28833 . + . ID=gene-AL42_RS23325;Name=AL42_RS23325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23325;old_locus_tag=AL42_03659 NZ_KK316785.1 Protein Homology CDS 27769 28833 . + 0 ID=cds-WP_003419199.1;Parent=gene-AL42_RS23325;Dbxref=GenBank:WP_003419199.1;Name=WP_003419199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218039.1;locus_tag=AL42_RS23325;product=thiolase domain-containing protein;protein_id=WP_003419199.1;transl_table=11 NZ_KK316785.1 RefSeq gene 28850 30034 . + . ID=gene-AL42_RS23330;Name=AL42_RS23330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23330;old_locus_tag=AL42_03660 NZ_KK316785.1 Protein Homology CDS 28850 30034 . + 0 ID=cds-WP_003906140.1;Parent=gene-AL42_RS23330;Dbxref=GenBank:WP_003906140.1;Name=WP_003906140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218040.1;locus_tag=AL42_RS23330;product=thiolase domain-containing protein;protein_id=WP_003906140.1;transl_table=11 NZ_KK316785.1 RefSeq gene 30076 31107 . + . ID=gene-AL42_RS23335;Name=AL42_RS23335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23335;old_locus_tag=AL42_03661 NZ_KK316785.1 Protein Homology CDS 30076 31107 . + 0 ID=cds-WP_003419207.1;Parent=gene-AL42_RS23335;Dbxref=GenBank:WP_003419207.1;Name=WP_003419207.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218041.1;locus_tag=AL42_RS23335;product=NHL repeat-containing protein;protein_id=WP_003419207.1;transl_table=11 NZ_KK316785.1 RefSeq gene 31121 31645 . - . ID=gene-AL42_RS23340;Name=AL42_RS23340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23340;old_locus_tag=AL42_03662 NZ_KK316785.1 Protein Homology CDS 31121 31645 . - 0 ID=cds-WP_003419208.1;Parent=gene-AL42_RS23340;Dbxref=GenBank:WP_003419208.1;Name=WP_003419208.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218042.1;locus_tag=AL42_RS23340;product=gamma carbonic anhydrase family protein;protein_id=WP_003419208.1;transl_table=11 NZ_KK316785.1 RefSeq gene 31760 32920 . + . ID=gene-AL42_RS23345;Name=kshA;gbkey=Gene;gene=kshA;gene_biotype=protein_coding;locus_tag=AL42_RS23345;old_locus_tag=AL42_03663 NZ_KK316785.1 Protein Homology CDS 31760 32920 . + 0 ID=cds-WP_003419211.1;Parent=gene-AL42_RS23345;Dbxref=GenBank:WP_003419211.1;Name=WP_003419211.1;gbkey=CDS;gene=kshA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218043.1;locus_tag=AL42_RS23345;product=3-ketosteroid-9-alpha-hydroxylase subunit KshA;protein_id=WP_003419211.1;transl_table=11 NZ_KK316785.1 RefSeq gene 32926 33375 . + . ID=gene-AL42_RS23350;Name=AL42_RS23350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23350;old_locus_tag=AL42_03664 NZ_KK316785.1 Protein Homology CDS 32926 33375 . + 0 ID=cds-WP_003419215.1;Parent=gene-AL42_RS23350;Dbxref=GenBank:WP_003419215.1;Name=WP_003419215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218044.1;locus_tag=AL42_RS23350;product=hypothetical protein;protein_id=WP_003419215.1;transl_table=11 NZ_KK316785.1 RefSeq gene 33800 34513 . - . ID=gene-AL42_RS23355;Name=AL42_RS23355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23355;old_locus_tag=AL42_03665 NZ_KK316785.1 Protein Homology CDS 33800 34513 . - 0 ID=cds-WP_003900086.1;Parent=gene-AL42_RS23355;Dbxref=GenBank:WP_003900086.1;Name=WP_003900086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218045.1;locus_tag=AL42_RS23355;product=hypothetical protein;protein_id=WP_003900086.1;transl_table=11 NZ_KK316785.1 RefSeq gene 34744 34941 . + . ID=gene-AL42_RS23360;Name=AL42_RS23360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23360 NZ_KK316785.1 Protein Homology CDS 34744 34941 . + 0 ID=cds-WP_003908266.1;Parent=gene-AL42_RS23360;Dbxref=GenBank:WP_003908266.1;Name=WP_003908266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003908266.1;locus_tag=AL42_RS23360;product=hypothetical protein;protein_id=WP_003908266.1;transl_table=11 NZ_KK316785.1 RefSeq gene 35205 36359 . - . ID=gene-AL42_RS23365;Name=AL42_RS23365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23365;old_locus_tag=AL42_03666 NZ_KK316785.1 Protein Homology CDS 35205 36359 . - 0 ID=cds-WP_003419222.1;Parent=gene-AL42_RS23365;Dbxref=GenBank:WP_003419222.1;Name=WP_003419222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218046.1;locus_tag=AL42_RS23365;product=TLR2-mediated response inhibitor;protein_id=WP_003419222.1;transl_table=11 NZ_KK316785.1 RefSeq gene 36359 37141 . - . ID=gene-AL42_RS23370;Name=AL42_RS23370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23370;old_locus_tag=AL42_03667 NZ_KK316785.1 Protein Homology CDS 36359 37141 . - 0 ID=cds-WP_003419223.1;Parent=gene-AL42_RS23370;Dbxref=GenBank:WP_003419223.1;Name=WP_003419223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218047.1;locus_tag=AL42_RS23370;product=SDR family oxidoreductase;protein_id=WP_003419223.1;transl_table=11 NZ_KK316785.1 RefSeq gene 37138 38265 . - . ID=gene-AL42_RS23375;Name=AL42_RS23375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23375;old_locus_tag=AL42_03668 NZ_KK316785.1 Protein Homology CDS 37138 38265 . - 0 ID=cds-WP_003906141.1;Parent=gene-AL42_RS23375;Dbxref=GenBank:WP_003906141.1;Name=WP_003906141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218048.1;locus_tag=AL42_RS23375;product=hypothetical protein;protein_id=WP_003906141.1;transl_table=11 NZ_KK316785.1 RefSeq gene 38664 39884 . + . ID=gene-AL42_RS23380;Name=AL42_RS23380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23380;old_locus_tag=AL42_03669 NZ_KK316785.1 Protein Homology CDS 38664 39884 . + 0 ID=cds-WP_003419226.1;Parent=gene-AL42_RS23380;Dbxref=GenBank:WP_003419226.1;Name=WP_003419226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177984.1;locus_tag=AL42_RS23380;product=PPE family protein;protein_id=WP_003419226.1;transl_table=11 NZ_KK316785.1 RefSeq gene 40026 41774 . - . ID=gene-AL42_RS23385;Name=AL42_RS23385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23385;old_locus_tag=AL42_03670 NZ_KK316785.1 Protein Homology CDS 40026 41774 . - 0 ID=cds-WP_003900088.1;Parent=gene-AL42_RS23385;Dbxref=GenBank:WP_003900088.1;Name=WP_003900088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177985.1;locus_tag=AL42_RS23385;product=PPE family protein;protein_id=WP_003900088.1;transl_table=11 NZ_KK316785.1 RefSeq gene 41873 42913 . - . ID=gene-AL42_RS23390;Name=dmpG;gbkey=Gene;gene=dmpG;gene_biotype=protein_coding;locus_tag=AL42_RS23390;old_locus_tag=AL42_03671 NZ_KK316785.1 Protein Homology CDS 41873 42913 . - 0 ID=cds-WP_031721847.1;Parent=gene-AL42_RS23390;Dbxref=GenBank:WP_031721847.1;Name=WP_031721847.1;Ontology_term=GO:0009056,GO:0008701;gbkey=CDS;gene=dmpG;go_function=4-hydroxy-2-oxovalerate aldolase activity|0008701||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218051.1;locus_tag=AL42_RS23390;product=4-hydroxy-2-oxovalerate aldolase;protein_id=WP_031721847.1;transl_table=11 NZ_KK316785.1 RefSeq gene 42910 43821 . - . ID=gene-AL42_RS23395;Name=hsaG;gbkey=Gene;gene=hsaG;gene_biotype=protein_coding;locus_tag=AL42_RS23395;old_locus_tag=AL42_03672 NZ_KK316785.1 Protein Homology CDS 42910 43821 . - 0 ID=cds-WP_003419251.1;Parent=gene-AL42_RS23395;Dbxref=GenBank:WP_003419251.1;Name=WP_003419251.1;Ontology_term=GO:0009056,GO:0008774;gbkey=CDS;gene=hsaG;go_function=acetaldehyde dehydrogenase (acetylating) activity|0008774||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218052.1;locus_tag=AL42_RS23395;product=acetaldehyde dehydrogenase (acetylating);protein_id=WP_003419251.1;transl_table=11 NZ_KK316785.1 RefSeq gene 43832 44617 . - . ID=gene-AL42_RS23400;Name=hsaE;gbkey=Gene;gene=hsaE;gene_biotype=protein_coding;locus_tag=AL42_RS23400;old_locus_tag=AL42_03673 NZ_KK316785.1 Protein Homology CDS 43832 44617 . - 0 ID=cds-WP_003419252.1;Parent=gene-AL42_RS23400;Dbxref=GenBank:WP_003419252.1;Name=WP_003419252.1;Ontology_term=GO:0008684,GO:0030145;gbkey=CDS;gene=hsaE;go_function=2-oxopent-4-enoate hydratase activity|0008684||IEA,manganese ion binding|0030145||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218053.1;locus_tag=AL42_RS23400;product=2-keto-4-pentenoate hydratase;protein_id=WP_003419252.1;transl_table=11 NZ_KK316785.1 RefSeq gene 44690 46381 . + . ID=gene-AL42_RS23405;Name=kstD;gbkey=Gene;gene=kstD;gene_biotype=protein_coding;locus_tag=AL42_RS23405;old_locus_tag=AL42_03674 NZ_KK316785.1 Protein Homology CDS 44690 46381 . + 0 ID=cds-WP_031721848.1;Parent=gene-AL42_RS23405;Dbxref=GenBank:WP_031721848.1;Name=WP_031721848.1;Ontology_term=GO:0006694,GO:0016042,GO:0047571;gbkey=CDS;gene=kstD;go_function=3-oxosteroid 1-dehydrogenase activity|0047571||IEA;go_process=steroid biosynthetic process|0006694||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218054.1;locus_tag=AL42_RS23405;product=3-oxosteroid 1-dehydrogenase;protein_id=WP_031721848.1;transl_table=11 NZ_KK316785.1 RefSeq gene 46383 47243 . + . ID=gene-AL42_RS23410;Name=AL42_RS23410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23410;old_locus_tag=AL42_03675 NZ_KK316785.1 Protein Homology CDS 46383 47243 . + 0 ID=cds-WP_003419285.1;Parent=gene-AL42_RS23410;Dbxref=GenBank:WP_003419285.1;Name=WP_003419285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177986.1;locus_tag=AL42_RS23410;product=dehydrogenase;protein_id=WP_003419285.1;transl_table=11 NZ_KK316785.1 RefSeq gene 47380 48819 . + . ID=gene-AL42_RS23415;Name=AL42_RS23415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23415;old_locus_tag=AL42_03676 NZ_KK316785.1 Protein Homology CDS 47380 48819 . + 0 ID=cds-WP_003900090.1;Parent=gene-AL42_RS23415;Dbxref=GenBank:WP_003900090.1;Name=WP_003900090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177987.1;locus_tag=AL42_RS23415;product=PPE family protein;protein_id=WP_003900090.1;transl_table=11 NZ_KK316785.1 RefSeq gene 48820 49980 . - . ID=gene-AL42_RS23420;Name=AL42_RS23420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23420;old_locus_tag=AL42_03677 NZ_KK316785.1 Protein Homology CDS 48820 49980 . - 0 ID=cds-WP_003901667.1;Parent=gene-AL42_RS23420;Dbxref=GenBank:WP_003901667.1;Name=WP_003901667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218057.1;locus_tag=AL42_RS23420;product=lipid-transfer protein;protein_id=WP_003901667.1;transl_table=11 NZ_KK316785.1 RefSeq gene 49980 50369 . - . ID=gene-AL42_RS23425;Name=chsH1;gbkey=Gene;gene=chsH1;gene_biotype=protein_coding;locus_tag=AL42_RS23425;old_locus_tag=AL42_03678 NZ_KK316785.1 Protein Homology CDS 49980 50369 . - 0 ID=cds-WP_003419290.1;Parent=gene-AL42_RS23425;Dbxref=GenBank:WP_003419290.1;Name=WP_003419290.1;gbkey=CDS;gene=chsH1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218058.1;locus_tag=AL42_RS23425;product=3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-CoA hydratase subunit beta ChsH1;protein_id=WP_003419290.1;transl_table=11 NZ_KK316785.1 RefSeq gene 50366 51301 . - . ID=gene-AL42_RS23430;Name=chsH2;gbkey=Gene;gene=chsH2;gene_biotype=protein_coding;locus_tag=AL42_RS23430;old_locus_tag=AL42_03679 NZ_KK316785.1 Protein Homology CDS 50366 51301 . - 0 ID=cds-WP_003419293.1;Parent=gene-AL42_RS23430;Dbxref=GenBank:WP_003419293.1;Name=WP_003419293.1;gbkey=CDS;gene=chsH2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218059.1;locus_tag=AL42_RS23430;product=3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-CoA hydratase subunit alpha ChsH2;protein_id=WP_003419293.1;transl_table=11 NZ_KK316785.1 RefSeq gene 51298 52461 . - . ID=gene-AL42_RS23435;Name=fadE29;gbkey=Gene;gene=fadE29;gene_biotype=protein_coding;locus_tag=AL42_RS23435;old_locus_tag=AL42_03680 NZ_KK316785.1 Protein Homology CDS 51298 52461 . - 0 ID=cds-WP_003419296.1;Parent=gene-AL42_RS23435;Dbxref=GenBank:WP_003419296.1;Name=WP_003419296.1;gbkey=CDS;gene=fadE29;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218060.1;locus_tag=AL42_RS23435;product=acyl-CoA dehydrogenase FadE29;protein_id=WP_003419296.1;transl_table=11 NZ_KK316785.1 RefSeq gene 52446 53465 . - . ID=gene-AL42_RS23440;Name=fadE28;gbkey=Gene;gene=fadE28;gene_biotype=protein_coding;locus_tag=AL42_RS23440;old_locus_tag=AL42_03681 NZ_KK316785.1 Protein Homology CDS 52446 53465 . - 0 ID=cds-WP_003419299.1;Parent=gene-AL42_RS23440;Dbxref=GenBank:WP_003419299.1;Name=WP_003419299.1;gbkey=CDS;gene=fadE28;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218061.1;locus_tag=AL42_RS23440;product=acyl-CoA dehydrogenase FadE28;protein_id=WP_003419299.1;transl_table=11 NZ_KK316785.1 RefSeq gene 53465 54718 . - . ID=gene-AL42_RS23445;Name=cyp125;gbkey=Gene;gene=cyp125;gene_biotype=protein_coding;locus_tag=AL42_RS23445;old_locus_tag=AL42_03682 NZ_KK316785.1 Protein Homology CDS 53465 54718 . - 0 ID=cds-WP_003912260.1;Parent=gene-AL42_RS23445;Dbxref=GenBank:WP_003912260.1;Name=WP_003912260.1;gbkey=CDS;gene=cyp125;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009938697.1;locus_tag=AL42_RS23445;product=steroid C26-monooxygenase Cyp125;protein_id=WP_003912260.1;transl_table=11 NZ_KK316785.1 RefSeq gene 54878 56053 . + . ID=gene-AL42_RS23450;Name=AL42_RS23450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23450;old_locus_tag=AL42_03683 NZ_KK316785.1 Protein Homology CDS 54878 56053 . + 0 ID=cds-WP_003419307.1;Parent=gene-AL42_RS23450;Dbxref=GenBank:WP_003419307.1;Name=WP_003419307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218063.1;locus_tag=AL42_RS23450;product=steroid 3-ketoacyl-CoA thiolase;protein_id=WP_003419307.1;transl_table=11 NZ_KK316785.1 RefSeq gene 56165 56620 . + . ID=gene-AL42_RS23455;Name=ddn;gbkey=Gene;gene=ddn;gene_biotype=protein_coding;locus_tag=AL42_RS23455;old_locus_tag=AL42_03684 NZ_KK316785.1 Protein Homology CDS 56165 56620 . + 0 ID=cds-WP_003419309.1;Parent=gene-AL42_RS23455;Dbxref=GenBank:WP_003419309.1;Name=WP_003419309.1;gbkey=CDS;gene=ddn;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218064.1;locus_tag=AL42_RS23455;product=deazaflavin-dependent nitroreductase Ddn;protein_id=WP_003419309.1;transl_table=11 NZ_KK316785.1 RefSeq gene 56702 57616 . - . ID=gene-AL42_RS23460;Name=AL42_RS23460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23460;old_locus_tag=AL42_03685 NZ_KK316785.1 Protein Homology CDS 56702 57616 . - 0 ID=cds-WP_003900711.1;Parent=gene-AL42_RS23460;Dbxref=GenBank:WP_003900711.1;Name=WP_003900711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218065.1;locus_tag=AL42_RS23460;product=SDR family oxidoreductase;protein_id=WP_003900711.1;transl_table=11 NZ_KK316785.1 RefSeq gene 57639 58418 . - . ID=gene-AL42_RS23465;Name=AL42_RS23465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23465;old_locus_tag=AL42_03686 NZ_KK316785.1 Protein Homology CDS 57639 58418 . - 0 ID=cds-WP_003419313.1;Parent=gene-AL42_RS23465;Dbxref=GenBank:WP_003419313.1;Name=WP_003419313.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218066.1;locus_tag=AL42_RS23465;product=SDR family oxidoreductase;protein_id=WP_003419313.1;transl_table=11 NZ_KK316785.1 RefSeq gene 58473 59216 . + . ID=gene-AL42_RS23470;Name=echA20;gbkey=Gene;gene=echA20;gene_biotype=protein_coding;locus_tag=AL42_RS23470;old_locus_tag=AL42_03687 NZ_KK316785.1 Protein Homology CDS 58473 59216 . + 0 ID=cds-WP_003419315.1;Parent=gene-AL42_RS23470;Dbxref=GenBank:WP_003419315.1;Name=WP_003419315.1;gbkey=CDS;gene=echA20;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218067.1;locus_tag=AL42_RS23470;product=(7aS)-7a-methyl-1%2C5-dioxo-2%2C3%2C5%2C6%2C7%2C7a-hexahydro-1H-indene-carboxyl-CoA hydrolase;protein_id=WP_003419315.1;transl_table=11 NZ_KK316785.1 RefSeq gene 59216 60094 . + . ID=gene-AL42_RS23475;Name=ipdA;gbkey=Gene;gene=ipdA;gene_biotype=protein_coding;locus_tag=AL42_RS23475;old_locus_tag=AL42_03688 NZ_KK316785.1 Protein Homology CDS 59216 60094 . + 0 ID=cds-WP_003900094.1;Parent=gene-AL42_RS23475;Dbxref=GenBank:WP_003900094.1;Name=WP_003900094.1;gbkey=CDS;gene=ipdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218068.1;locus_tag=AL42_RS23475;product=cholesterol ring-cleaving hydrolase subunit IpdA;protein_id=WP_003900094.1;transl_table=11 NZ_KK316785.1 RefSeq gene 60091 60843 . + . ID=gene-AL42_RS23480;Name=ipdB;gbkey=Gene;gene=ipdB;gene_biotype=protein_coding;locus_tag=AL42_RS23480;old_locus_tag=AL42_03689 NZ_KK316785.1 Protein Homology CDS 60091 60843 . + 0 ID=cds-WP_003419321.1;Parent=gene-AL42_RS23480;Dbxref=GenBank:WP_003419321.1;Name=WP_003419321.1;gbkey=CDS;gene=ipdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218069.1;locus_tag=AL42_RS23480;product=cholesterol ring-cleaving hydrolase subunit IpdB;protein_id=WP_003419321.1;transl_table=11 NZ_KK316785.1 RefSeq gene 60941 62008 . + . ID=gene-AL42_RS23485;Name=ipdC;gbkey=Gene;gene=ipdC;gene_biotype=protein_coding;locus_tag=AL42_RS23485;old_locus_tag=AL42_03690 NZ_KK316785.1 Protein Homology CDS 60941 62008 . + 0 ID=cds-WP_003419324.1;Parent=gene-AL42_RS23485;Dbxref=GenBank:WP_003419324.1;Name=WP_003419324.1;gbkey=CDS;gene=ipdC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218070.1;locus_tag=AL42_RS23485;product=(3aS%2C4S%2C5R%2C7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxyl-CoA dehydrogenase;protein_id=WP_003419324.1;transl_table=11 NZ_KK316785.1 RefSeq gene 62005 64062 . + . ID=gene-AL42_RS23490;Name=fdxB;gbkey=Gene;gene=fdxB;gene_biotype=protein_coding;locus_tag=AL42_RS23490;old_locus_tag=AL42_03691 NZ_KK316785.1 Protein Homology CDS 62005 64062 . + 0 ID=cds-WP_003901670.1;Parent=gene-AL42_RS23490;Dbxref=GenBank:WP_003901670.1;Name=WP_003901670.1;Ontology_term=GO:0006629;gbkey=CDS;gene=fdxB;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218071.1;locus_tag=AL42_RS23490;product=fatty acid desaturase;protein_id=WP_003901670.1;transl_table=11 NZ_KK316785.1 RefSeq gene 64150 65019 . - . ID=gene-AL42_RS23495;Name=AL42_RS23495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23495;old_locus_tag=AL42_03692 NZ_KK316785.1 Protein Homology CDS 64150 65019 . - 0 ID=cds-WP_003900096.1;Parent=gene-AL42_RS23495;Dbxref=GenBank:WP_003900096.1;Name=WP_003900096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218072.1;locus_tag=AL42_RS23495;product=DUF559 domain-containing protein;protein_id=WP_003900096.1;transl_table=11 NZ_KK316785.1 RefSeq gene 65124 66284 . - . ID=gene-AL42_RS23500;Name=fadA6;gbkey=Gene;gene=fadA6;gene_biotype=protein_coding;locus_tag=AL42_RS23500;old_locus_tag=AL42_03693 NZ_KK316785.1 Protein Homology CDS 65124 66284 . - 0 ID=cds-WP_003419328.1;Parent=gene-AL42_RS23500;Dbxref=GenBank:WP_003419328.1;Name=WP_003419328.1;gbkey=CDS;gene=fadA6;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218073.1;locus_tag=AL42_RS23500;product=steroid 3-ketoacyl-CoA thiolase FadA6;protein_id=WP_003419328.1;transl_table=11 NZ_KK316785.1 RefSeq gene 66349 66951 . - . ID=gene-AL42_RS23505;Name=kstR2;gbkey=Gene;gene=kstR2;gene_biotype=protein_coding;locus_tag=AL42_RS23505;old_locus_tag=AL42_03694 NZ_KK316785.1 Protein Homology CDS 66349 66951 . - 0 ID=cds-WP_003419329.1;Parent=gene-AL42_RS23505;Dbxref=GenBank:WP_003419329.1;Name=WP_003419329.1;gbkey=CDS;gene=kstR2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218074.1;locus_tag=AL42_RS23505;product=TetR family transcriptional regulator KstR2;protein_id=WP_003419329.1;transl_table=11 NZ_KK316785.1 RefSeq gene 67300 68958 . + . ID=gene-AL42_RS23510;Name=AL42_RS23510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23510;old_locus_tag=AL42_03695 NZ_KK316785.1 Protein Homology CDS 67300 68958 . + 0 ID=cds-WP_003419334.1;Parent=gene-AL42_RS23510;Dbxref=GenBank:WP_003419334.1;Name=WP_003419334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177988.1;locus_tag=AL42_RS23510;product=PPE family protein;protein_id=WP_003419334.1;transl_table=11 NZ_KK316785.1 RefSeq gene 68967 69755 . - . ID=gene-AL42_RS23515;Name=ipdF;gbkey=Gene;gene=ipdF;gene_biotype=protein_coding;locus_tag=AL42_RS23515;old_locus_tag=AL42_03696 NZ_KK316785.1 Protein Homology CDS 68967 69755 . - 0 ID=cds-WP_003900097.1;Parent=gene-AL42_RS23515;Dbxref=GenBank:WP_003900097.1;Name=WP_003900097.1;gbkey=CDS;gene=ipdF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218076.1;locus_tag=AL42_RS23515;product=(5R%2C7aS)-5-hydroxy-7a-methyl-1-oxo-2%2C3%2C5%2C6%2C7%2C7a-hexahydro-1H-indene-carboxyl-CoA reductase;protein_id=WP_003900097.1;transl_table=11 NZ_KK316785.1 RefSeq gene 69752 70909 . - . ID=gene-AL42_RS23520;Name=ipdE1;gbkey=Gene;gene=ipdE1;gene_biotype=protein_coding;gene_synonym=fadE30;locus_tag=AL42_RS23520;old_locus_tag=AL42_03697 NZ_KK316785.1 Protein Homology CDS 69752 70909 . - 0 ID=cds-WP_003419340.1;Parent=gene-AL42_RS23520;Dbxref=GenBank:WP_003419340.1;Name=WP_003419340.1;gbkey=CDS;gene=ipdE1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218077.1;locus_tag=AL42_RS23520;product=acyl-CoA dehydrogenase IpdE1;protein_id=WP_003419340.1;transl_table=11 NZ_KK316785.1 RefSeq gene 70957 72480 . + . ID=gene-AL42_RS23525;Name=fadD3;gbkey=Gene;gene=fadD3;gene_biotype=protein_coding;locus_tag=AL42_RS23525;old_locus_tag=AL42_03698 NZ_KK316785.1 Protein Homology CDS 70957 72480 . + 0 ID=cds-WP_003900098.1;Parent=gene-AL42_RS23525;Dbxref=GenBank:WP_003900098.1;Name=WP_003900098.1;gbkey=CDS;gene=fadD3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218078.1;locus_tag=AL42_RS23525;product=3-((3aS%2C4S%2C7aS)-7a-methyl-1%2C5-dioxo-octahydro-1H-inden-4-yl)propanoate--CoA ligase FadD3;protein_id=WP_003900098.1;transl_table=11 NZ_KK316785.1 RefSeq gene 72481 73614 . + . ID=gene-AL42_RS23530;Name=AL42_RS23530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23530;old_locus_tag=AL42_03699 NZ_KK316785.1 Protein Homology CDS 72481 73614 . + 0 ID=cds-WP_003419346.1;Parent=gene-AL42_RS23530;Dbxref=GenBank:WP_003419346.1;Name=WP_003419346.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218079.1;locus_tag=AL42_RS23530;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003419346.1;transl_table=11 NZ_KK316785.1 RefSeq gene 73611 74570 . + . ID=gene-AL42_RS23535;Name=AL42_RS23535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23535;old_locus_tag=AL42_03700 NZ_KK316785.1 Protein Homology CDS 73611 74570 . + 0 ID=cds-WP_003902521.1;Parent=gene-AL42_RS23535;Dbxref=GenBank:WP_003902521.1;Name=WP_003902521.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218080.1;locus_tag=AL42_RS23535;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003902521.1;transl_table=11 NZ_KK316785.1 RefSeq gene 74567 75523 . + . ID=gene-AL42_RS23540;Name=ipdE2;gbkey=Gene;gene=ipdE2;gene_biotype=protein_coding;gene_synonym=fadE33;locus_tag=AL42_RS23540;old_locus_tag=AL42_03701 NZ_KK316785.1 Protein Homology CDS 74567 75523 . + 0 ID=cds-WP_003419352.1;Parent=gene-AL42_RS23540;Dbxref=GenBank:WP_003419352.1;Name=WP_003419352.1;Ontology_term=GO:0006707,GO:0003995,GO:0050660;gbkey=CDS;gene=ipdE2;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cholesterol catabolic process|0006707||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218081.1;locus_tag=AL42_RS23540;product=acyl-CoA dehydrogenase IpdE2;protein_id=WP_003419352.1;transl_table=11 NZ_KK316785.1 RefSeq gene 75520 76686 . + . ID=gene-AL42_RS23545;Name=aspB;gbkey=Gene;gene=aspB;gene_biotype=protein_coding;locus_tag=AL42_RS23545;old_locus_tag=AL42_03702 NZ_KK316785.1 Protein Homology CDS 75520 76686 . + 0 ID=cds-WP_003419356.1;Parent=gene-AL42_RS23545;Dbxref=GenBank:WP_003419356.1;Name=WP_003419356.1;Ontology_term=GO:0009058,GO:0008483,GO:0030170;gbkey=CDS;gene=aspB;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218082.1;locus_tag=AL42_RS23545;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_003419356.1;transl_table=11 NZ_KK316785.1 RefSeq gene 76651 77502 . - . ID=gene-AL42_RS23550;Name=nat;gbkey=Gene;gene=nat;gene_biotype=protein_coding;locus_tag=AL42_RS23550;old_locus_tag=AL42_03703 NZ_KK316785.1 Protein Homology CDS 76651 77502 . - 0 ID=cds-WP_003419364.1;Parent=gene-AL42_RS23550;Dbxref=GenBank:WP_003419364.1;Name=WP_003419364.1;gbkey=CDS;gene=nat;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177989.1;locus_tag=AL42_RS23550;product=arylamine N-acetyltransferase;protein_id=WP_003419364.1;transl_table=11 NZ_KK316785.1 RefSeq gene 77487 77753 . - . ID=gene-AL42_RS23555;Name=AL42_RS23555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23555;old_locus_tag=AL42_03704 NZ_KK316785.1 Protein Homology CDS 77487 77753 . - 0 ID=cds-WP_003419367.1;Parent=gene-AL42_RS23555;Dbxref=GenBank:WP_003419367.1;Name=WP_003419367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177990.1;locus_tag=AL42_RS23555;product=hypothetical protein;protein_id=WP_003419367.1;transl_table=11 NZ_KK316785.1 RefSeq gene 77784 77954 . - . ID=gene-AL42_RS27335;Name=AL42_RS27335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27335 NZ_KK316785.1 Protein Homology CDS 77784 77954 . - 0 ID=cds-WP_003906149.1;Parent=gene-AL42_RS27335;Dbxref=GenBank:WP_003906149.1;Name=WP_003906149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003906149.1;locus_tag=AL42_RS27335;product=hypothetical protein;protein_id=WP_003906149.1;transl_table=11 NZ_KK316785.1 RefSeq gene 78039 78602 . - . ID=gene-AL42_RS23560;Name=hsaB;gbkey=Gene;gene=hsaB;gene_biotype=protein_coding;locus_tag=AL42_RS23560;old_locus_tag=AL42_03705 NZ_KK316785.1 Protein Homology CDS 78039 78602 . - 0 ID=cds-WP_003419374.1;Parent=gene-AL42_RS23560;Dbxref=GenBank:WP_003419374.1;Name=WP_003419374.1;Ontology_term=GO:0009056,GO:0016042,GO:0036382;gbkey=CDS;gene=hsaB;go_function=flavin reductase (NADH) activity|0036382||IEA;go_process=catabolic process|0009056||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218084.1;locus_tag=AL42_RS23560;product=3-hydroxy-9%2C10-secoandrosta-1%2C3%2C5(10)-triene-9%2C17-dione monooxygenase reductase subunit;protein_id=WP_003419374.1;transl_table=11 NZ_KK316785.1 RefSeq gene 78617 79519 . - . ID=gene-AL42_RS23565;Name=hsaC;gbkey=Gene;gene=hsaC;gene_biotype=protein_coding;gene_synonym=bphC;locus_tag=AL42_RS23565;old_locus_tag=AL42_03706 NZ_KK316785.1 Protein Homology CDS 78617 79519 . - 0 ID=cds-WP_003419378.1;Parent=gene-AL42_RS23565;Dbxref=GenBank:WP_003419378.1;Name=WP_003419378.1;Ontology_term=GO:0009056,GO:0016042,GO:0047071;gbkey=CDS;gene=hsaC;go_function=3%2C4-dihydroxy-9%2C10-secoandrosta-1%2C3%2C5(10)-triene-9%2C17-dione 4%2C5-dioxygenase activity|0047071||IEA;go_process=catabolic process|0009056||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218085.1;locus_tag=AL42_RS23565;product=iron-dependent extradiol dioxygenase HsaC;protein_id=WP_003419378.1;transl_table=11 NZ_KK316785.1 RefSeq gene 79516 80391 . - . ID=gene-AL42_RS23570;Name=hsaD;gbkey=Gene;gene=hsaD;gene_biotype=protein_coding;gene_synonym=bphD;locus_tag=AL42_RS23570;old_locus_tag=AL42_03707 NZ_KK316785.1 Protein Homology CDS 79516 80391 . - 0 ID=cds-WP_003419381.1;Parent=gene-AL42_RS23570;Dbxref=GenBank:WP_003419381.1;Name=WP_003419381.1;Ontology_term=GO:0009056,GO:0016042,GO:0102296;gbkey=CDS;gene=hsaD;go_function=4%2C5-9%2C10-diseco-3-hydroxy-5%2C9%2C17-trioxoandrosta-1(10)%2C2-diene-4-oate hydrolase activity|0102296||IEA;go_process=catabolic process|0009056||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218086.1;locus_tag=AL42_RS23570;product=4%2C5:9%2C10-diseco-3-hydroxy-5%2C9%2C17-trioxoandrosta-1(10)%2C2-diene-4-oate hydrolase;protein_id=WP_003419381.1;transl_table=11 NZ_KK316785.1 RefSeq gene 80406 81590 . - . ID=gene-AL42_RS23575;Name=hsaA;gbkey=Gene;gene=hsaA;gene_biotype=protein_coding;locus_tag=AL42_RS23575;old_locus_tag=AL42_03708 NZ_KK316785.1 Protein Homology CDS 80406 81590 . - 0 ID=cds-WP_003900101.1;Parent=gene-AL42_RS23575;Dbxref=GenBank:WP_003900101.1;Name=WP_003900101.1;Ontology_term=GO:0009056,GO:0016042,GO:0036383;gbkey=CDS;gene=hsaA;go_function=3-hydroxy-9%2C10-secoandrosta-1%2C3%2C5(10)-triene-9%2C17-dione monooxygenase activity|0036383||IEA;go_process=catabolic process|0009056||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218087.1;locus_tag=AL42_RS23575;product=3-hydroxy-9%2C10-secoandrosta-1%2C3%2C5(10)-triene-9%2C17-dione monooxygenase oxygenase subunit;protein_id=WP_003900101.1;transl_table=11 NZ_KK316785.1 RefSeq gene 81737 82813 . + . ID=gene-AL42_RS23580;Name=kshB;gbkey=Gene;gene=kshB;gene_biotype=protein_coding;locus_tag=AL42_RS23580;old_locus_tag=AL42_03709 NZ_KK316785.1 Protein Homology CDS 81737 82813 . + 0 ID=cds-WP_003900102.1;Parent=gene-AL42_RS23580;Dbxref=GenBank:WP_003900102.1;Name=WP_003900102.1;gbkey=CDS;gene=kshB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218088.1;locus_tag=AL42_RS23580;product=3-ketosteroid-9-alpha-hydroxylase reductase subunit;protein_id=WP_003900102.1;transl_table=11 NZ_KK316785.1 RefSeq gene 82831 83361 . + . ID=gene-AL42_RS23585;Name=AL42_RS23585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23585;old_locus_tag=AL42_03710 NZ_KK316785.1 Protein Homology CDS 82831 83361 . + 0 ID=cds-WP_003419389.1;Parent=gene-AL42_RS23585;Dbxref=GenBank:WP_003419389.1;Name=WP_003419389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218089.1;locus_tag=AL42_RS23585;product=hypothetical protein;protein_id=WP_003419389.1;transl_table=11 NZ_KK316785.1 RefSeq gene 83397 85532 . - . ID=gene-AL42_RS23590;Name=AL42_RS23590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23590;old_locus_tag=AL42_03711 NZ_KK316785.1 Protein Homology CDS 83397 85532 . - 0 ID=cds-WP_003419394.1;Parent=gene-AL42_RS23590;Dbxref=GenBank:WP_003419394.1;Name=WP_003419394.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218090.1;locus_tag=AL42_RS23590;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003419394.1;transl_table=11 NZ_KK316785.1 RefSeq gene 85804 86403 . + . ID=gene-AL42_RS23595;Name=kstR;gbkey=Gene;gene=kstR;gene_biotype=protein_coding;locus_tag=AL42_RS23595;old_locus_tag=AL42_03712 NZ_KK316785.1 Protein Homology CDS 85804 86403 . + 0 ID=cds-WP_003419397.1;Parent=gene-AL42_RS23595;Dbxref=GenBank:WP_003419397.1;Name=WP_003419397.1;Ontology_term=GO:0003677;gbkey=CDS;gene=kstR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218091.3;locus_tag=AL42_RS23595;product=cholesterol catabolism transcriptional regulator KstR;protein_id=WP_003419397.1;transl_table=11 NZ_KK316785.1 RefSeq gene 86409 87488 . - . ID=gene-AL42_RS23600;Name=AL42_RS23600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23600;old_locus_tag=AL42_03713 NZ_KK316785.1 Protein Homology CDS 86409 87488 . - 0 ID=cds-WP_003419400.1;Parent=gene-AL42_RS23600;Dbxref=GenBank:WP_003419400.1;Name=WP_003419400.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218092.1;locus_tag=AL42_RS23600;product=Rv3575c family transcriptional regulator;protein_id=WP_003419400.1;transl_table=11 NZ_KK316785.1 RefSeq gene 87678 88391 . + . ID=gene-AL42_RS23605;Name=lppH;gbkey=Gene;gene=lppH;gene_biotype=protein_coding;locus_tag=AL42_RS23605;old_locus_tag=AL42_03714 NZ_KK316785.1 Protein Homology CDS 87678 88391 . + 0 ID=cds-WP_003900105.1;Parent=gene-AL42_RS23605;Dbxref=GenBank:WP_003900105.1;Name=WP_003900105.1;gbkey=CDS;gene=lppH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177991.1;locus_tag=AL42_RS23605;product=sensor domain-containing protein;protein_id=WP_003900105.1;transl_table=11 NZ_KK316785.1 RefSeq gene 88528 89448 . + . ID=gene-AL42_RS23610;Name=AL42_RS23610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23610;old_locus_tag=AL42_03715 NZ_KK316785.1 Protein Homology CDS 88528 89448 . + 0 ID=cds-WP_003900106.1;Parent=gene-AL42_RS23610;Dbxref=GenBank:WP_003900106.1;Name=WP_003900106.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900106.1;locus_tag=AL42_RS23610;product=MBL fold metallo-hydrolase;protein_id=WP_003900106.1;transl_table=11 NZ_KK316785.1 RefSeq gene 89462 90703 . + . ID=gene-AL42_RS23615;Name=AL42_RS23615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23615;old_locus_tag=AL42_03716 NZ_KK316785.1 Protein Homology CDS 89462 90703 . + 0 ID=cds-WP_003419420.1;Parent=gene-AL42_RS23615;Dbxref=GenBank:WP_003419420.1;Name=WP_003419420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218095.1;locus_tag=AL42_RS23615;product=SLC13 family permease;protein_id=WP_003419420.1;transl_table=11 NZ_KK316785.1 RefSeq gene 90745 91713 . - . ID=gene-AL42_RS23620;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=AL42_RS23620;old_locus_tag=AL42_03717 NZ_KK316785.1 Protein Homology CDS 90745 91713 . - 0 ID=cds-WP_003900107.1;Parent=gene-AL42_RS23620;Dbxref=GenBank:WP_003900107.1;Name=WP_003900107.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218096.1;locus_tag=AL42_RS23620;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_003900107.1;transl_table=11 NZ_KK316785.1 RefSeq gene 91714 93123 . - . ID=gene-AL42_RS23625;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=AL42_RS23625;old_locus_tag=AL42_03718 NZ_KK316785.1 Protein Homology CDS 91714 93123 . - 0 ID=cds-WP_003900108.1;Parent=gene-AL42_RS23625;Dbxref=GenBank:WP_003900108.1;Name=WP_003900108.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177992.1;locus_tag=AL42_RS23625;product=cysteine--tRNA ligase;protein_id=WP_003900108.1;transl_table=11 NZ_KK316785.1 RefSeq gene 93188 93667 . - . ID=gene-AL42_RS23630;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=AL42_RS23630;old_locus_tag=AL42_03719 NZ_KK316785.1 Protein Homology CDS 93188 93667 . - 0 ID=cds-WP_003419432.1;Parent=gene-AL42_RS23630;Dbxref=GenBank:WP_003419432.1;Name=WP_003419432.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218098.1;locus_tag=AL42_RS23630;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_003419432.1;transl_table=11 NZ_KK316785.1 RefSeq gene 93664 94359 . - . ID=gene-AL42_RS23635;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=AL42_RS23635;old_locus_tag=AL42_03720 NZ_KK316785.1 Protein Homology CDS 93664 94359 . - 0 ID=cds-WP_003419436.1;Parent=gene-AL42_RS23635;Dbxref=GenBank:WP_003419436.1;Name=WP_003419436.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218099.1;locus_tag=AL42_RS23635;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_003419436.1;transl_table=11 NZ_KK316785.1 RefSeq gene 94376 94864 . - . ID=gene-AL42_RS23640;Name=carD;gbkey=Gene;gene=carD;gene_biotype=protein_coding;locus_tag=AL42_RS23640;old_locus_tag=AL42_03721 NZ_KK316785.1 Protein Homology CDS 94376 94864 . - 0 ID=cds-WP_003419482.1;Parent=gene-AL42_RS23640;Dbxref=GenBank:WP_003419482.1;Name=WP_003419482.1;gbkey=CDS;gene=carD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218100.1;locus_tag=AL42_RS23640;product=RNA polymerase-binding transcription factor CarD;protein_id=WP_003419482.1;transl_table=11 NZ_KK316785.1 RefSeq gene 95150 95698 . + . ID=gene-AL42_RS23645;Name=AL42_RS23645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23645;old_locus_tag=AL42_03722 NZ_KK316785.1 Protein Homology CDS 95150 95698 . + 0 ID=cds-WP_003900715.1;Parent=gene-AL42_RS23645;Dbxref=GenBank:WP_003900715.1;Name=WP_003900715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218101.1;locus_tag=AL42_RS23645;product=copper chaperone PCu(A)C domain-containing protein;protein_id=WP_003900715.1;transl_table=11 NZ_KK316785.1 RefSeq gene 95764 97206 . + . ID=gene-AL42_RS23650;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=AL42_RS23650;old_locus_tag=AL42_03723 NZ_KK316785.1 Protein Homology CDS 95764 97206 . + 0 ID=cds-WP_003419487.1;Parent=gene-AL42_RS23650;Dbxref=GenBank:WP_003419487.1;Name=WP_003419487.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218102.1;locus_tag=AL42_RS23650;product=DNA repair protein RadA;protein_id=WP_003419487.1;transl_table=11 NZ_KK316785.1 RefSeq gene 97211 98287 . + . ID=gene-AL42_RS23655;Name=disA;gbkey=Gene;gene=disA;gene_biotype=protein_coding;locus_tag=AL42_RS23655;old_locus_tag=AL42_03724 NZ_KK316785.1 Protein Homology CDS 97211 98287 . + 0 ID=cds-WP_003419489.1;Parent=gene-AL42_RS23655;Dbxref=GenBank:WP_003419489.1;Name=WP_003419489.1;gbkey=CDS;gene=disA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218103.1;locus_tag=AL42_RS23655;product=DNA integrity scanning diadenylate cyclase DisA;protein_id=WP_003419489.1;transl_table=11 NZ_KK316785.1 RefSeq gene 98288 99082 . - . ID=gene-AL42_RS23660;Name=AL42_RS23660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23660;old_locus_tag=AL42_03725 NZ_KK316785.1 Protein Homology CDS 98288 99082 . - 0 ID=cds-WP_003419490.1;Parent=gene-AL42_RS23660;Dbxref=GenBank:WP_003419490.1;Name=WP_003419490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218104.1;locus_tag=AL42_RS23660;product=hypothetical protein;protein_id=WP_003419490.1;transl_table=11 NZ_KK316785.1 RefSeq gene 99191 99814 . - . ID=gene-AL42_RS23665;Name=canB;gbkey=Gene;gene=canB;gene_biotype=protein_coding;locus_tag=AL42_RS23665;old_locus_tag=AL42_03726 NZ_KK316785.1 Protein Homology CDS 99191 99814 . - 0 ID=cds-WP_003419492.1;Parent=gene-AL42_RS23665;Dbxref=GenBank:WP_003419492.1;Name=WP_003419492.1;gbkey=CDS;gene=canB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218105.1;locus_tag=AL42_RS23665;product=beta-carbonic anhydrase CanB;protein_id=WP_003419492.1;transl_table=11 NZ_KK316785.1 RefSeq gene 99813 100727 . + . ID=gene-AL42_RS23670;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=AL42_RS23670;old_locus_tag=AL42_03727 NZ_KK316785.1 Protein Homology CDS 99813 100727 . + 0 ID=cds-WP_003419495.1;Parent=gene-AL42_RS23670;Dbxref=GenBank:WP_003419495.1;Name=WP_003419495.1;gbkey=CDS;gene=mutY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218106.1;locus_tag=AL42_RS23670;product=HhH-GPD family protein;protein_id=WP_003419495.1;transl_table=11 NZ_KK316785.1 RefSeq gene 100724 102478 . - . ID=gene-AL42_RS23675;Name=AL42_RS23675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23675;old_locus_tag=AL42_03728 NZ_KK316785.1 Protein Homology CDS 100724 102478 . - 0 ID=cds-WP_003911026.1;Parent=gene-AL42_RS23675;Dbxref=GenBank:WP_003911026.1;Name=WP_003911026.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177993.1;locus_tag=AL42_RS23675;product=PE family protein;protein_id=WP_003911026.1;transl_table=11 NZ_KK316785.1 RefSeq gene 102589 103362 . - . ID=gene-AL42_RS23680;Name=AL42_RS23680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23680;old_locus_tag=AL42_03729 NZ_KK316785.1 Protein Homology CDS 102589 103362 . - 0 ID=cds-WP_003906153.1;Parent=gene-AL42_RS23680;Dbxref=GenBank:WP_003906153.1;Name=WP_003906153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218108.1;locus_tag=AL42_RS23680;product=alpha/beta fold hydrolase;protein_id=WP_003906153.1;transl_table=11 NZ_KK316785.1 RefSeq gene 103377 103694 . + . ID=gene-AL42_RS23685;Name=mhuD;gbkey=Gene;gene=mhuD;gene_biotype=protein_coding;locus_tag=AL42_RS23685;old_locus_tag=AL42_03730 NZ_KK316785.1 Protein Homology CDS 103377 103694 . + 0 ID=cds-WP_003419501.1;Parent=gene-AL42_RS23685;Dbxref=GenBank:WP_003419501.1;Name=WP_003419501.1;gbkey=CDS;gene=mhuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218109.1;locus_tag=AL42_RS23685;product=mycobilin-forming heme oxygenase MhuD;protein_id=WP_003419501.1;transl_table=11 NZ_KK316785.1 RefSeq gene 103672 105030 . + . ID=gene-AL42_RS23690;Name=lpqF;gbkey=Gene;gene=lpqF;gene_biotype=protein_coding;locus_tag=AL42_RS23690;old_locus_tag=AL42_03731 NZ_KK316785.1 Protein Homology CDS 103672 105030 . + 0 ID=cds-WP_003900716.1;Parent=gene-AL42_RS23690;Dbxref=GenBank:WP_003900716.1;Name=WP_003900716.1;Ontology_term=GO:0030655,GO:0008800;gbkey=CDS;gene=lpqF;go_function=beta-lactamase activity|0008800||IEA;go_process=beta-lactam antibiotic catabolic process|0030655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218110.1;locus_tag=AL42_RS23690;product=serine hydrolase;protein_id=WP_003900716.1;transl_table=11 NZ_KK316785.1 RefSeq gene 105177 106004 . + . ID=gene-AL42_RS23695;Name=AL42_RS23695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23695;old_locus_tag=AL42_03732 NZ_KK316785.1 Protein Homology CDS 105177 106004 . + 0 ID=cds-WP_003419504.1;Parent=gene-AL42_RS23695;Dbxref=GenBank:WP_003419504.1;Name=WP_003419504.1;Ontology_term=GO:0045087,GO:0008745,GO:0016019,GO:0042834,GO:0046872;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,peptidoglycan immune receptor activity|0016019||IEA,peptidoglycan binding|0042834||IEA,metal ion binding|0046872||IEA;go_process=innate immune response|0045087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218111.1;locus_tag=AL42_RS23695;product=peptidoglycan recognition protein family protein;protein_id=WP_003419504.1;transl_table=11 NZ_KK316785.1 RefSeq gene 106051 107370 . - . ID=gene-AL42_RS23700;Name=AL42_RS23700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23700;old_locus_tag=AL42_03733 NZ_KK316785.1 Protein Homology CDS 106051 107370 . - 0 ID=cds-WP_003911027.1;Parent=gene-AL42_RS23700;Dbxref=GenBank:WP_003911027.1;Name=WP_003911027.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177994.1;locus_tag=AL42_RS23700;product=PE family protein;protein_id=WP_003911027.1;transl_table=11 NZ_KK316785.1 RefSeq gene 107478 110024 . - . ID=gene-AL42_RS23705;Name=clpC1;gbkey=Gene;gene=clpC1;gene_biotype=protein_coding;locus_tag=AL42_RS23705;old_locus_tag=AL42_03734 NZ_KK316785.1 Protein Homology CDS 107478 110024 . - 0 ID=cds-WP_003419511.1;Parent=gene-AL42_RS23705;Dbxref=GenBank:WP_003419511.1;Name=WP_003419511.1;gbkey=CDS;gene=clpC1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177995.1;locus_tag=AL42_RS23705;product=ATP-dependent protease ATP-binding subunit ClpC;protein_id=WP_003419511.1;transl_table=11 NZ_KK316785.1 RefSeq gene 110301 110639 . - . ID=gene-AL42_RS23710;Name=lsr2;gbkey=Gene;gene=lsr2;gene_biotype=protein_coding;locus_tag=AL42_RS23710;old_locus_tag=AL42_03735 NZ_KK316785.1 Protein Homology CDS 110301 110639 . - 0 ID=cds-WP_003419513.1;Parent=gene-AL42_RS23710;Dbxref=GenBank:WP_003419513.1;Name=WP_003419513.1;gbkey=CDS;gene=lsr2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218114.1;locus_tag=AL42_RS23710;product=histone-like nucleoid-structuring protein Lsr2;protein_id=WP_003419513.1;transl_table=11 NZ_KK316785.1 RefSeq gene 110743 112260 . - . ID=gene-AL42_RS23715;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=AL42_RS23715;old_locus_tag=AL42_03736 NZ_KK316785.1 Protein Homology CDS 110743 112260 . - 0 ID=cds-WP_003901683.1;Parent=gene-AL42_RS23715;Dbxref=GenBank:WP_003901683.1;Name=WP_003901683.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218115.1;locus_tag=AL42_RS23715;product=lysine--tRNA ligase;protein_id=WP_003901683.1;transl_table=11 NZ_KK316785.1 RefSeq gene 112361 113179 . - . ID=gene-AL42_RS23725;Name=AL42_RS23725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23725;old_locus_tag=AL42_03738 NZ_KK316785.1 Protein Homology CDS 112361 113179 . - 0 ID=cds-WP_003419517.1;Parent=gene-AL42_RS23725;Dbxref=GenBank:WP_003419517.1;Name=WP_003419517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218117.1;locus_tag=AL42_RS23725;product=type III pantothenate kinase;protein_id=WP_003419517.1;transl_table=11 NZ_KK316785.1 RefSeq gene 113182 113601 . - . ID=gene-AL42_RS23730;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=AL42_RS23730;old_locus_tag=AL42_03739 NZ_KK316785.1 Protein Homology CDS 113182 113601 . - 0 ID=cds-WP_003419523.1;Parent=gene-AL42_RS23730;Dbxref=GenBank:WP_003419523.1;Name=WP_003419523.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218118.1;locus_tag=AL42_RS23730;product=aspartate 1-decarboxylase;protein_id=WP_003419523.1;transl_table=11 NZ_KK316785.1 RefSeq gene 113601 114530 . - . ID=gene-AL42_RS23735;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=AL42_RS23735;old_locus_tag=AL42_03740 NZ_KK316785.1 Protein Homology CDS 113601 114530 . - 0 ID=cds-WP_003419526.1;Parent=gene-AL42_RS23735;Dbxref=GenBank:WP_003419526.1;Name=WP_003419526.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218119.1;locus_tag=AL42_RS23735;product=pantoate--beta-alanine ligase;protein_id=WP_003419526.1;transl_table=11 NZ_KK316785.1 RefSeq gene 114527 115438 . - . ID=gene-AL42_RS23740;Name=AL42_RS23740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23740;old_locus_tag=AL42_03741 NZ_KK316785.1 Protein Homology CDS 114527 115438 . - 0 ID=cds-WP_003419533.1;Parent=gene-AL42_RS23740;Dbxref=GenBank:WP_003419533.1;Name=WP_003419533.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218120.1;locus_tag=AL42_RS23740;product=Rossmann-like and DUF2520 domain-containing protein;protein_id=WP_003419533.1;transl_table=11 NZ_KK316785.1 RefSeq gene 115623 116816 . - . ID=gene-AL42_RS23745;Name=AL42_RS23745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23745;old_locus_tag=AL42_03742 NZ_KK316785.1 Protein Homology CDS 115623 116816 . - 0 ID=cds-WP_003899595.1;Parent=gene-AL42_RS23745;Dbxref=GenBank:WP_003899595.1;Name=WP_003899595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218121.2;locus_tag=AL42_RS23745;product=DUF6779 domain-containing protein;protein_id=WP_003899595.1;transl_table=11 NZ_KK316785.1 RefSeq gene 117025 117501 . - . ID=gene-AL42_RS23750;Name=AL42_RS23750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23750;old_locus_tag=AL42_03743 NZ_KK316785.1 Protein Homology CDS 117025 117501 . - 0 ID=cds-WP_003419535.1;Parent=gene-AL42_RS23750;Dbxref=GenBank:WP_003419535.1;Name=WP_003419535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218122.1;locus_tag=AL42_RS23750;product=DUF3180 domain-containing protein;protein_id=WP_003419535.1;transl_table=11 NZ_KK316785.1 RefSeq gene 117501 118067 . - . ID=gene-AL42_RS23755;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=AL42_RS23755;old_locus_tag=AL42_03744 NZ_KK316785.1 Protein Homology CDS 117501 118067 . - 0 ID=cds-WP_003419536.1;Parent=gene-AL42_RS23755;Dbxref=GenBank:WP_003419536.1;Name=WP_003419536.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218123.1;locus_tag=AL42_RS23755;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_003419536.1;transl_table=11 NZ_KK316785.1 RefSeq gene 118064 118465 . - . ID=gene-AL42_RS23760;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=AL42_RS23760;old_locus_tag=AL42_03745 NZ_KK316785.1 Protein Homology CDS 118064 118465 . - 0 ID=cds-WP_003419537.1;Parent=gene-AL42_RS23760;Dbxref=GenBank:WP_003419537.1;Name=WP_003419537.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177996.1;locus_tag=AL42_RS23760;product=dihydroneopterin aldolase;protein_id=WP_003419537.1;transl_table=11 NZ_KK316785.1 RefSeq gene 118458 119300 . - . ID=gene-AL42_RS23765;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=AL42_RS23765;old_locus_tag=AL42_03746 NZ_KK316785.1 Protein Homology CDS 118458 119300 . - 0 ID=cds-WP_003899596.1;Parent=gene-AL42_RS23765;Dbxref=GenBank:WP_003899596.1;Name=WP_003899596.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177997.1;locus_tag=AL42_RS23765;product=dihydropteroate synthase;protein_id=WP_003899596.1;transl_table=11 NZ_KK316785.1 RefSeq gene 119297 119905 . - . ID=gene-AL42_RS23770;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=AL42_RS23770;old_locus_tag=AL42_03747 NZ_KK316785.1 Protein Homology CDS 119297 119905 . - 0 ID=cds-WP_003899597.1;Parent=gene-AL42_RS23770;Dbxref=GenBank:WP_003899597.1;Name=WP_003899597.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218126.1;locus_tag=AL42_RS23770;product=GTP cyclohydrolase I FolE;protein_id=WP_003899597.1;transl_table=11 NZ_KK316785.1 RefSeq gene 119921 122203 . - . ID=gene-AL42_RS23775;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=AL42_RS23775;old_locus_tag=AL42_03748 NZ_KK316785.1 Protein Homology CDS 119921 122203 . - 0 ID=cds-WP_003419543.1;Parent=gene-AL42_RS23775;Dbxref=GenBank:WP_003419543.1;Name=WP_003419543.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887,GO:0016020;gbkey=CDS;gene=ftsH;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218127.1;locus_tag=AL42_RS23775;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_003419543.1;transl_table=11 NZ_KK316785.1 RefSeq gene 122757 122918 . - . ID=gene-AL42_RS23790;Name=AL42_RS23790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23790;old_locus_tag=AL42_03751 NZ_KK316785.1 Protein Homology CDS 122757 122918 . - 0 ID=cds-WP_003902532.1;Parent=gene-AL42_RS23790;Dbxref=GenBank:WP_003902532.1;Name=WP_003902532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218130.1;locus_tag=AL42_RS23790;product=hypothetical protein;protein_id=WP_003902532.1;transl_table=11 NZ_KK316785.1 RefSeq gene 123018 123572 . - . ID=gene-AL42_RS23795;Name=espD;gbkey=Gene;gene=espD;gene_biotype=protein_coding;locus_tag=AL42_RS23795;old_locus_tag=AL42_03752 NZ_KK316785.1 Protein Homology CDS 123018 123572 . - 0 ID=cds-WP_003419545.1;Parent=gene-AL42_RS23795;Dbxref=GenBank:WP_003419545.1;Name=WP_003419545.1;gbkey=CDS;gene=espD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218131.1;locus_tag=AL42_RS23795;product=type VII secretion system ESX-1 target EspD;protein_id=WP_003419545.1;transl_table=11 NZ_KK316785.1 RefSeq gene 123688 123999 . - . ID=gene-AL42_RS23800;Name=espC;gbkey=Gene;gene=espC;gene_biotype=protein_coding;locus_tag=AL42_RS23800;old_locus_tag=AL42_03753 NZ_KK316785.1 Protein Homology CDS 123688 123999 . - 0 ID=cds-WP_003899599.1;Parent=gene-AL42_RS23800;Dbxref=GenBank:WP_003899599.1;Name=WP_003899599.1;gbkey=CDS;gene=espC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218132.1;locus_tag=AL42_RS23800;product=type VII secretion system ESX-1 filament-forming target EspC;protein_id=WP_003899599.1;transl_table=11 NZ_KK316785.1 RefSeq gene 124073 125251 . - . ID=gene-AL42_RS23805;Name=espA;gbkey=Gene;gene=espA;gene_biotype=protein_coding;locus_tag=AL42_RS23805;old_locus_tag=AL42_03754 NZ_KK316785.1 Protein Homology CDS 124073 125251 . - 0 ID=cds-WP_003419551.1;Parent=gene-AL42_RS23805;Dbxref=GenBank:WP_003419551.1;Name=WP_003419551.1;gbkey=CDS;gene=espA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218133.1;locus_tag=AL42_RS23805;product=type VII secretion system ESX-1 target EspA;protein_id=WP_003419551.1;transl_table=11 NZ_KK316785.1 RefSeq gene 126609 127577 . + . ID=gene-AL42_RS23810;Name=ephA;gbkey=Gene;gene=ephA;gene_biotype=protein_coding;locus_tag=AL42_RS23810;old_locus_tag=AL42_03755 NZ_KK316785.1 Protein Homology CDS 126609 127577 . + 0 ID=cds-WP_003899600.1;Parent=gene-AL42_RS23810;Dbxref=GenBank:WP_003899600.1;Name=WP_003899600.1;gbkey=CDS;gene=ephA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218134.1;locus_tag=AL42_RS23810;product=epoxide hydrolase EphA;protein_id=WP_003899600.1;transl_table=11 NZ_KK316785.1 RefSeq gene 127574 128761 . + . ID=gene-AL42_RS23815;Name=AL42_RS23815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23815;old_locus_tag=AL42_03756 NZ_KK316785.1 Protein Homology CDS 127574 128761 . + 0 ID=cds-WP_003906163.1;Parent=gene-AL42_RS23815;Dbxref=GenBank:WP_003906163.1;Name=WP_003906163.1;Ontology_term=GO:0010181,GO:0016491,GO:0070967;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218135.1;locus_tag=AL42_RS23815;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_003906163.1;transl_table=11 NZ_KK316785.1 RefSeq gene 128860 129144 . - . ID=gene-AL42_RS23820;Name=esxL;gbkey=Gene;gene=esxL;gene_biotype=protein_coding;locus_tag=AL42_RS23820;old_locus_tag=AL42_03757 NZ_KK316785.1 Protein Homology CDS 128860 129144 . - 0 ID=cds-WP_003900722.1;Parent=gene-AL42_RS23820;Dbxref=GenBank:WP_003900722.1;Name=WP_003900722.1;gbkey=CDS;gene=esxL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215553.1;locus_tag=AL42_RS23820;product=type VII secretion system ESX-5 protein EsxL;protein_id=WP_003900722.1;transl_table=11 NZ_KK316785.1 RefSeq gene 129171 129467 . - . ID=gene-AL42_RS23825;Name=esxJ;gbkey=Gene;gene=esxJ;gene_biotype=protein_coding;locus_tag=AL42_RS23825;old_locus_tag=AL42_03758 NZ_KK316785.1 Protein Homology CDS 129171 129467 . - 0 ID=cds-WP_003405345.1-2;Parent=gene-AL42_RS23825;Dbxref=GenBank:WP_003405345.1;Name=WP_003405345.1;gbkey=CDS;gene=esxJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215554.1;locus_tag=AL42_RS23825;product=type VII secretion system ESX-5 protein EsxJ;protein_id=WP_003405345.1;transl_table=11 NZ_KK316785.1 RefSeq gene 129524 130765 . - . ID=gene-AL42_RS23830;Name=AL42_RS23830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23830;old_locus_tag=AL42_03759 NZ_KK316785.1 Protein Homology CDS 129524 130765 . - 0 ID=cds-WP_003900723.1;Parent=gene-AL42_RS23830;Dbxref=GenBank:WP_003900723.1;Name=WP_003900723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177998.1;locus_tag=AL42_RS23830;product=PPE family protein;protein_id=WP_003900723.1;transl_table=11 NZ_KK316785.1 RefSeq gene 130775 131074 . - . ID=gene-AL42_RS23835;Name=AL42_RS23835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23835;old_locus_tag=AL42_03760 NZ_KK316785.1 Protein Homology CDS 130775 131074 . - 0 ID=cds-WP_003899605.1;Parent=gene-AL42_RS23835;Dbxref=GenBank:WP_003899605.1;Name=WP_003899605.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177999.1;locus_tag=AL42_RS23835;product=PE family protein;protein_id=WP_003899605.1;transl_table=11 NZ_KK316785.1 RefSeq gene 131403 132125 . + . ID=gene-AL42_RS23840;Name=lpqG;gbkey=Gene;gene=lpqG;gene_biotype=protein_coding;locus_tag=AL42_RS23840;old_locus_tag=AL42_03761 NZ_KK316785.1 Protein Homology CDS 131403 132125 . + 0 ID=cds-WP_003899606.1;Parent=gene-AL42_RS23840;Dbxref=GenBank:WP_003899606.1;Name=WP_003899606.1;gbkey=CDS;gene=lpqG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218140.1;locus_tag=AL42_RS23840;product=SIMPL domain-containing protein;protein_id=WP_003899606.1;transl_table=11 NZ_KK316785.1 RefSeq gene 132130 132780 . - . ID=gene-AL42_RS23845;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=AL42_RS23845;old_locus_tag=AL42_03762 NZ_KK316785.1 Protein Homology CDS 132130 132780 . - 0 ID=cds-WP_003419558.1;Parent=gene-AL42_RS23845;Dbxref=GenBank:WP_003419558.1;Name=WP_003419558.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218141.1;locus_tag=AL42_RS23845;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_003419558.1;transl_table=11 NZ_KK316785.1 RefSeq gene 132777 133748 . - . ID=gene-AL42_RS23850;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=AL42_RS23850;old_locus_tag=AL42_03763 NZ_KK316785.1 Protein Homology CDS 132777 133748 . - 0 ID=cds-WP_003899608.1;Parent=gene-AL42_RS23850;Dbxref=GenBank:WP_003899608.1;Name=WP_003899608.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218142.1;locus_tag=AL42_RS23850;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_003899608.1;transl_table=11 NZ_KK316785.1 RefSeq gene 133727 134779 . - . ID=gene-AL42_RS23855;Name=AL42_RS23855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23855;old_locus_tag=AL42_03764 NZ_KK316785.1 Protein Homology CDS 133727 134779 . - 0 ID=cds-WP_003419571.1;Parent=gene-AL42_RS23855;Dbxref=GenBank:WP_003419571.1;Name=WP_003419571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218143.1;locus_tag=AL42_RS23855;product=zinc-dependent metalloprotease;protein_id=WP_003419571.1;transl_table=11 NZ_KK316785.1 RefSeq gene 134776 136161 . - . ID=gene-AL42_RS23860;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=AL42_RS23860;old_locus_tag=AL42_03765 NZ_KK316785.1 Protein Homology CDS 134776 136161 . - 0 ID=cds-WP_003899610.1;Parent=gene-AL42_RS23860;Dbxref=GenBank:WP_003899610.1;Name=WP_003899610.1;Ontology_term=GO:0009252,GO:0004175,GO:0009002;gbkey=CDS;gene=dacB;go_function=endopeptidase activity|0004175||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218144.1;locus_tag=AL42_RS23860;product=D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine endopeptidase;protein_id=WP_003899610.1;transl_table=11 NZ_KK316785.1 RefSeq gene 136299 136787 . + . ID=gene-AL42_RS23865;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=AL42_RS23865;old_locus_tag=AL42_03766 NZ_KK316785.1 Protein Homology CDS 136299 136787 . + 0 ID=cds-WP_003419577.1;Parent=gene-AL42_RS23865;Dbxref=GenBank:WP_003419577.1;Name=WP_003419577.1;gbkey=CDS;gene=ppa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218145.1;locus_tag=AL42_RS23865;product=inorganic diphosphatase;protein_id=WP_003419577.1;transl_table=11 NZ_KK316785.1 RefSeq gene 136833 137930 . - . ID=gene-AL42_RS23870;Name=AL42_RS23870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23870;old_locus_tag=AL42_03767 NZ_KK316785.1 Protein Homology CDS 136833 137930 . - 0 ID=cds-WP_003419580.1;Parent=gene-AL42_RS23870;Dbxref=GenBank:WP_003419580.1;Name=WP_003419580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218146.1;locus_tag=AL42_RS23870;product=DUF475 domain-containing protein;protein_id=WP_003419580.1;transl_table=11 NZ_KK316785.1 RefSeq gene 138051 139346 . + . ID=gene-AL42_RS23875;Name=AL42_RS23875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23875;old_locus_tag=AL42_03768 NZ_KK316785.1 Protein Homology CDS 138051 139346 . + 0 ID=cds-WP_003419582.1;Parent=gene-AL42_RS23875;Dbxref=GenBank:WP_003419582.1;Name=WP_003419582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218147.1;locus_tag=AL42_RS23875;product=hypothetical protein;protein_id=WP_003419582.1;transl_table=11 NZ_KK316785.1 RefSeq gene 139390 140115 . + . ID=gene-AL42_RS23880;Name=AL42_RS23880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23880;old_locus_tag=AL42_03769 NZ_KK316785.1 Protein Homology CDS 139390 140115 . + 0 ID=cds-WP_003419585.1;Parent=gene-AL42_RS23880;Dbxref=GenBank:WP_003419585.1;Name=WP_003419585.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218148.1;locus_tag=AL42_RS23880;product=glycosyltransferase family 2 protein;protein_id=WP_003419585.1;transl_table=11 NZ_KK316785.1 RefSeq gene 140112 140456 . + . ID=gene-AL42_RS23885;Name=AL42_RS23885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23885;old_locus_tag=AL42_03770 NZ_KK316785.1 Protein Homology CDS 140112 140456 . + 0 ID=cds-WP_003419590.1;Parent=gene-AL42_RS23885;Dbxref=GenBank:WP_003419590.1;Name=WP_003419590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218149.1;locus_tag=AL42_RS23885;product=DUF2304 domain-containing protein;protein_id=WP_003419590.1;transl_table=11 NZ_KK316785.1 RefSeq gene 140667 141542 . + . ID=gene-AL42_RS23890;Name=AL42_RS23890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23890;old_locus_tag=AL42_03771 NZ_KK316785.1 Protein Homology CDS 140667 141542 . + 0 ID=cds-WP_003419601.1;Parent=gene-AL42_RS23890;Dbxref=GenBank:WP_003419601.1;Name=WP_003419601.1;Ontology_term=GO:0046872,GO:0051213;gbkey=CDS;go_function=metal ion binding|0046872||IEA,dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218150.1;locus_tag=AL42_RS23890;product=phytanoyl-CoA dioxygenase family protein;protein_id=WP_003419601.1;transl_table=11 NZ_KK316785.1 RefSeq gene 141543 142487 . - . ID=gene-AL42_RS23895;Name=galE1;gbkey=Gene;gene=galE1;gene_biotype=protein_coding;locus_tag=AL42_RS23895;old_locus_tag=AL42_03772 NZ_KK316785.1 Protein Homology CDS 141543 142487 . - 0 ID=cds-WP_003419610.1;Parent=gene-AL42_RS23895;Dbxref=GenBank:WP_003419610.1;Name=WP_003419610.1;gbkey=CDS;gene=galE1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215015.2;locus_tag=AL42_RS23895;product=UDP-glucose 4-epimerase;protein_id=WP_003419610.1;transl_table=11 NZ_KK316785.1 RefSeq gene 142510 144285 . + . ID=gene-AL42_RS23900;Name=AL42_RS23900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23900;old_locus_tag=AL42_03773 NZ_KK316785.1 Protein Homology CDS 142510 144285 . + 0 ID=cds-WP_003419613.1;Parent=gene-AL42_RS23900;Dbxref=GenBank:WP_003419613.1;Name=WP_003419613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218152.1;locus_tag=AL42_RS23900;product=hypothetical protein;protein_id=WP_003419613.1;transl_table=11 NZ_KK316785.1 RefSeq pseudogene 144628 145860 . + . ID=gene-AL42_RS26605;Name=istA;gbkey=Gene;gene=istA;gene_biotype=pseudogene;locus_tag=AL42_RS26605;pseudo=true NZ_KK316785.1 Protein Homology CDS 144628 145860 . + 0 ID=cds-AL42_RS26605;Parent=gene-AL42_RS26605;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003414864.1;locus_tag=AL42_RS26605;product=IS21 family transposase;pseudo=true;transl_table=11 NZ_KK316785.1 RefSeq gene 145860 146606 . + . ID=gene-AL42_RS23915;Name=AL42_RS23915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23915;old_locus_tag=AL42_03776 NZ_KK316785.1 Protein Homology CDS 145860 146606 . + 0 ID=cds-WP_003899614.1;Parent=gene-AL42_RS23915;Dbxref=GenBank:WP_003899614.1;Name=WP_003899614.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218155.1;locus_tag=AL42_RS23915;product=ATP-binding protein;protein_id=WP_003899614.1;transl_table=11 NZ_KK316785.1 RefSeq pseudogene 146982 147077 . + . ID=gene-AL42_RS28205;Name=AL42_RS28205;end_range=147077,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS28205;partial=true;pseudo=true;start_range=.,146982 NZ_KK316785.1 Protein Homology CDS 146982 147077 . + 0 ID=cds-AL42_RS28205;Parent=gene-AL42_RS28205;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=147077,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900311.1;locus_tag=AL42_RS28205;partial=true;product=hypothetical protein;pseudo=true;start_range=.,146982;transl_table=11 NZ_KK316785.1 RefSeq gene 147396 148625 . - . ID=gene-AL42_RS23925;Name=AL42_RS23925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23925;old_locus_tag=AL42_03778 NZ_KK316785.1 Protein Homology CDS 147396 148625 . - 0 ID=cds-WP_003899615.1;Parent=gene-AL42_RS23925;Dbxref=GenBank:WP_003899615.1;Name=WP_003899615.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218157.1;locus_tag=AL42_RS23925;product=IS256-like element IS1553 family transposase;protein_id=WP_003899615.1;transl_table=11 NZ_KK316785.1 RefSeq gene 148801 149436 . - . ID=gene-AL42_RS23930;Name=fic;gbkey=Gene;gene=fic;gene_biotype=protein_coding;locus_tag=AL42_RS23930;old_locus_tag=AL42_03779 NZ_KK316785.1 Protein Homology CDS 148801 149436 . - 0 ID=cds-WP_003899616.1;Parent=gene-AL42_RS23930;Dbxref=GenBank:WP_003899616.1;Name=WP_003899616.1;Ontology_term=GO:0018117,GO:0005524,GO:0070733;gbkey=CDS;gene=fic;go_function=ATP binding|0005524||IEA,AMPylase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218158.1;locus_tag=AL42_RS23930;product=Fic/DOC family protein;protein_id=WP_003899616.1;transl_table=11 NZ_KK316785.1 RefSeq gene 149447 149641 . - . ID=gene-AL42_RS23935;Name=AL42_RS23935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23935;old_locus_tag=AL42_03780 NZ_KK316785.1 Protein Homology CDS 149447 149641 . - 0 ID=cds-WP_003419627.1;Parent=gene-AL42_RS23935;Dbxref=GenBank:WP_003419627.1;Name=WP_003419627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218159.1;locus_tag=AL42_RS23935;product=antitoxin VbhA family protein;protein_id=WP_003419627.1;transl_table=11 NZ_KK316785.1 RefSeq gene 149806 149940 . + . ID=gene-AL42_RS27865;Name=AL42_RS27865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27865 NZ_KK316785.1 Protein Homology CDS 149806 149940 . + 0 ID=cds-WP_003419630.1;Parent=gene-AL42_RS27865;Dbxref=GenBank:WP_003419630.1;Name=WP_003419630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003419630.1;locus_tag=AL42_RS27865;product=hypothetical protein;protein_id=WP_003419630.1;transl_table=11 NZ_KK316785.1 RefSeq gene 150036 150227 . + . ID=gene-AL42_RS23940;Name=AL42_RS23940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23940;old_locus_tag=AL42_03781 NZ_KK316785.1 Protein Homology CDS 150036 150227 . + 0 ID=cds-WP_003419633.1;Parent=gene-AL42_RS23940;Dbxref=GenBank:WP_003419633.1;Name=WP_003419633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218160.1;locus_tag=AL42_RS23940;product=hypothetical protein;protein_id=WP_003419633.1;transl_table=11 NZ_KK316785.1 RefSeq gene 150238 150313 . - . ID=gene-AL42_RS23945;Name=AL42_RS23945;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL42_RS23945;old_locus_tag=AL42_03782 NZ_KK316785.1 tRNAscan-SE tRNA 150238 150313 . - . ID=rna-AL42_RS23945;Parent=gene-AL42_RS23945;anticodon=(pos:complement(150278..150280));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS23945;product=tRNA-Thr NZ_KK316785.1 tRNAscan-SE exon 150238 150313 . - . ID=exon-AL42_RS23945-1;Parent=rna-AL42_RS23945;anticodon=(pos:complement(150278..150280));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS23945;product=tRNA-Thr NZ_KK316785.1 RefSeq gene 150392 151597 . - . ID=gene-AL42_RS23950;Name=AL42_RS23950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23950;old_locus_tag=AL42_03783 NZ_KK316785.1 Protein Homology CDS 150392 151597 . - 0 ID=cds-WP_003419637.1;Parent=gene-AL42_RS23950;Dbxref=GenBank:WP_003419637.1;Name=WP_003419637.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0008408,GO:0009360;gbkey=CDS;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218161.1;locus_tag=AL42_RS23950;product=DNA polymerase III subunit delta';protein_id=WP_003419637.1;transl_table=11 NZ_KK316785.1 RefSeq gene 151683 153332 . + . ID=gene-AL42_RS23955;Name=AL42_RS23955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23955;old_locus_tag=AL42_03784 NZ_KK316785.1 Protein Homology CDS 151683 153332 . + 0 ID=cds-WP_003419638.1;Parent=gene-AL42_RS23955;Dbxref=GenBank:WP_003419638.1;Name=WP_003419638.1;Ontology_term=GO:0007165,GO:0009190,GO:0035556,GO:0000166,GO:0009975,GO:0016779,GO:0016829,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,cyclase activity|0009975||IEA,nucleotidyltransferase activity|0016779||IEA,lyase activity|0016829||IEA,metal ion binding|0046872||IEA;go_process=signal transduction|0007165||IEA,cyclic nucleotide biosynthetic process|0009190||IEA,intracellular signal transduction|0035556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218162.1;locus_tag=AL42_RS23955;product=adenylate/guanylate cyclase domain-containing protein;protein_id=WP_003419638.1;transl_table=11 NZ_KK316785.1 RefSeq gene 153329 156133 . - . ID=gene-AL42_RS23960;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=AL42_RS23960;old_locus_tag=AL42_03785 NZ_KK316785.1 Protein Homology CDS 153329 156133 . - 0 ID=cds-WP_003899617.1;Parent=gene-AL42_RS23960;Dbxref=GenBank:WP_003899617.1;Name=WP_003899617.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218163.1;locus_tag=AL42_RS23960;product=type I DNA topoisomerase;protein_id=WP_003899617.1;transl_table=11 NZ_KK316785.1 RefSeq gene 156486 157064 . - . ID=gene-AL42_RS23965;Name=AL42_RS23965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23965;old_locus_tag=AL42_03786 NZ_KK316785.1 Protein Homology CDS 156486 157064 . - 0 ID=cds-WP_003419642.1;Parent=gene-AL42_RS23965;Dbxref=GenBank:WP_003419642.1;Name=WP_003419642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218164.1;locus_tag=AL42_RS23965;product=hypothetical protein;protein_id=WP_003419642.1;transl_table=11 NZ_KK316785.1 RefSeq gene 157204 157407 . - . ID=gene-AL42_RS23970;Name=cspA;gbkey=Gene;gene=cspA;gene_biotype=protein_coding;locus_tag=AL42_RS23970;old_locus_tag=AL42_03787 NZ_KK316785.1 Protein Homology CDS 157204 157407 . - 0 ID=cds-WP_003419650.1;Parent=gene-AL42_RS23970;Dbxref=GenBank:WP_003419650.1;Name=WP_003419650.1;gbkey=CDS;gene=cspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218165.1;locus_tag=AL42_RS23970;product=cold shock protein CspA;protein_id=WP_003419650.1;transl_table=11 NZ_KK316785.1 RefSeq gene 157657 159972 . + . ID=gene-AL42_RS23975;Name=AL42_RS23975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23975;old_locus_tag=AL42_03788 NZ_KK316785.1 Protein Homology CDS 157657 159972 . + 0 ID=cds-WP_003419652.1;Parent=gene-AL42_RS23975;Dbxref=GenBank:WP_003419652.1;Name=WP_003419652.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218166.1;locus_tag=AL42_RS23975;product=DEAD/DEAH box helicase;protein_id=WP_003419652.1;transl_table=11 NZ_KK316785.1 RefSeq gene 160109 160393 . + . ID=gene-AL42_RS23980;Name=AL42_RS23980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23980;old_locus_tag=AL42_03789 NZ_KK316785.1 Protein Homology CDS 160109 160393 . + 0 ID=cds-WP_003419654.1;Parent=gene-AL42_RS23980;Dbxref=GenBank:WP_003419654.1;Name=WP_003419654.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178000.1;locus_tag=AL42_RS23980;product=PE family protein;protein_id=WP_003419654.1;transl_table=11 NZ_KK316785.1 RefSeq gene 160717 161754 . + . ID=gene-AL42_RS23985;Name=AL42_RS23985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23985;old_locus_tag=AL42_03790 NZ_KK316785.1 Protein Homology CDS 160717 161754 . + 0 ID=cds-WP_003419657.1;Parent=gene-AL42_RS23985;Dbxref=GenBank:WP_003419657.1;Name=WP_003419657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218168.1;locus_tag=AL42_RS23985;product=PAS domain-containing protein;protein_id=WP_003419657.1;transl_table=11 NZ_KK316785.1 RefSeq gene 161897 162052 . - . ID=gene-AL42_RS27340;Name=AL42_RS27340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27340 NZ_KK316785.1 Protein Homology CDS 161897 162052 . - 0 ID=cds-WP_003917826.1;Parent=gene-AL42_RS27340;Dbxref=GenBank:WP_003917826.1;Name=WP_003917826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015291617.1;locus_tag=AL42_RS27340;product=hypothetical protein;protein_id=WP_003917826.1;transl_table=11 NZ_KK316785.1 RefSeq pseudogene 162508 162725 . + . ID=gene-AL42_RS27790;Name=AL42_RS27790;end_range=162725,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS27790;old_locus_tag=AL42_03791;partial=true;pseudo=true NZ_KK316785.1 Protein Homology CDS 162508 162725 . + 0 ID=cds-AL42_RS27790;Parent=gene-AL42_RS27790;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005576,GO:0009986;end_range=162725,.;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: protein motif:HMM:NF013127.6;locus_tag=AL42_RS27790;partial=true;product=PE family protein;pseudo=true;transl_table=11 NZ_KK316785.1 RefSeq gene 162816 163421 . + . ID=gene-AL42_RS23995;Name=AL42_RS23995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS23995;old_locus_tag=AL42_03792 NZ_KK316785.1 Protein Homology CDS 162816 163421 . + 0 ID=cds-WP_024753814.1;Parent=gene-AL42_RS23995;Dbxref=GenBank:WP_024753814.1;Name=WP_024753814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178002.1;locus_tag=AL42_RS23995;product=PGRS repeat-containing protein;protein_id=WP_024753814.1;transl_table=11 NZ_KK316785.1 RefSeq gene 163554 163862 . - . ID=gene-AL42_RS24000;Name=AL42_RS24000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24000;old_locus_tag=AL42_03793 NZ_KK316785.1 Protein Homology CDS 163554 163862 . - 0 ID=cds-WP_012054375.1;Parent=gene-AL42_RS24000;Dbxref=GenBank:WP_012054375.1;Name=WP_012054375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003925186.1;locus_tag=AL42_RS24000;product=Rv3654c family TadE-like protein;protein_id=WP_012054375.1;transl_table=11 NZ_KK316785.1 RefSeq pseudogene 163817 164193 . - . ID=gene-AL42_RS24005;Name=AL42_RS24005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS24005;old_locus_tag=AL42_03794;pseudo=true NZ_KK316785.1 Protein Homology CDS 163817 164193 . - 0 ID=cds-AL42_RS24005;Parent=gene-AL42_RS24005;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218172.1;locus_tag=AL42_RS24005;product=apoptosis inhibitor;pseudo=true;transl_table=11 NZ_KK316785.1 RefSeq gene 164217 164423 . - . ID=gene-AL42_RS24010;Name=AL42_RS24010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24010;old_locus_tag=AL42_03795 NZ_KK316785.1 Protein Homology CDS 164217 164423 . - 0 ID=cds-WP_003419673.1;Parent=gene-AL42_RS24010;Dbxref=GenBank:WP_003419673.1;Name=WP_003419673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218173.1;locus_tag=AL42_RS24010;product=DUF4244 domain-containing protein;protein_id=WP_003419673.1;transl_table=11 NZ_KK316785.1 RefSeq gene 164433 165035 . - . ID=gene-AL42_RS24015;Name=AL42_RS24015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24015;old_locus_tag=AL42_03796 NZ_KK316785.1 Protein Homology CDS 164433 165035 . - 0 ID=cds-WP_003899622.1;Parent=gene-AL42_RS24015;Dbxref=GenBank:WP_003899622.1;Name=WP_003899622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015456535.1;locus_tag=AL42_RS24015;product=type II secretion system F family protein;protein_id=WP_003899622.1;transl_table=11 NZ_KK316785.1 RefSeq gene 165032 165832 . - . ID=gene-AL42_RS24020;Name=AL42_RS24020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24020;old_locus_tag=AL42_03797 NZ_KK316785.1 Protein Homology CDS 165032 165832 . - 0 ID=cds-WP_003419679.1;Parent=gene-AL42_RS24020;Dbxref=GenBank:WP_003419679.1;Name=WP_003419679.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218175.1;locus_tag=AL42_RS24020;product=type II secretion system F family protein;protein_id=WP_003419679.1;transl_table=11 NZ_KK316785.1 RefSeq gene 165829 166992 . - . ID=gene-AL42_RS24025;Name=AL42_RS24025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24025;old_locus_tag=AL42_03798 NZ_KK316785.1 Protein Homology CDS 165829 166992 . - 0 ID=cds-WP_003899624.1;Parent=gene-AL42_RS24025;Dbxref=GenBank:WP_003899624.1;Name=WP_003899624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899624.1;locus_tag=AL42_RS24025;product=TadA family conjugal transfer-associated ATPase;protein_id=WP_003899624.1;transl_table=11 NZ_KK316785.1 RefSeq gene 166989 168041 . - . ID=gene-AL42_RS24030;Name=ssd;gbkey=Gene;gene=ssd;gene_biotype=protein_coding;locus_tag=AL42_RS24030;old_locus_tag=AL42_03799 NZ_KK316785.1 Protein Homology CDS 166989 168041 . - 0 ID=cds-WP_003900732.1;Parent=gene-AL42_RS24030;Dbxref=GenBank:WP_003900732.1;Name=WP_003900732.1;gbkey=CDS;gene=ssd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218177.1;locus_tag=AL42_RS24030;product=septum site-determining protein Ssd;protein_id=WP_003900732.1;transl_table=11 NZ_KK316785.1 RefSeq gene 168540 169403 . + . ID=gene-AL42_RS24035;Name=AL42_RS24035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24035;old_locus_tag=AL42_03800 NZ_KK316785.1 Protein Homology CDS 168540 169403 . + 0 ID=cds-WP_003419689.1;Parent=gene-AL42_RS24035;Dbxref=GenBank:WP_003419689.1;Name=WP_003419689.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218178.1;locus_tag=AL42_RS24035;product=HAD-IB family hydrolase;protein_id=WP_003419689.1;transl_table=11 NZ_KK316785.1 RefSeq gene 170158 170928 . - . ID=gene-AL42_RS24040;Name=AL42_RS24040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24040;old_locus_tag=AL42_03801 NZ_KK316785.1 Protein Homology CDS 170158 170928 . - 0 ID=cds-WP_003899626.1;Parent=gene-AL42_RS24040;Dbxref=GenBank:WP_003899626.1;Name=WP_003899626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218179.1;locus_tag=AL42_RS24040;product=Fic family protein;protein_id=WP_003899626.1;transl_table=11 NZ_KK316785.1 RefSeq gene 170925 172571 . - . ID=gene-AL42_RS24045;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=AL42_RS24045;old_locus_tag=AL42_03802 NZ_KK316785.1 Protein Homology CDS 170925 172571 . - 0 ID=cds-WP_003900733.1;Parent=gene-AL42_RS24045;Dbxref=GenBank:WP_003900733.1;Name=WP_003900733.1;Ontology_term=GO:0015833,GO:0005524;gbkey=CDS;gene=dppD;go_function=ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218180.1;locus_tag=AL42_RS24045;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_003900733.1;transl_table=11 NZ_KK316785.1 RefSeq gene 172568 173431 . - . ID=gene-AL42_RS24050;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=AL42_RS24050;old_locus_tag=AL42_03803 NZ_KK316785.1 Protein Homology CDS 172568 173431 . - 0 ID=cds-WP_003899628.1;Parent=gene-AL42_RS24050;Dbxref=GenBank:WP_003899628.1;Name=WP_003899628.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;gene=dppC;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020785225.1;locus_tag=AL42_RS24050;product=ABC transporter permease;protein_id=WP_003899628.1;transl_table=11 NZ_KK316785.1 RefSeq gene 173424 174350 . - . ID=gene-AL42_RS24055;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=AL42_RS24055;old_locus_tag=AL42_03804 NZ_KK316785.1 Protein Homology CDS 173424 174350 . - 0 ID=cds-WP_003419701.1;Parent=gene-AL42_RS24055;Dbxref=GenBank:WP_003419701.1;Name=WP_003419701.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dppB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218182.1;locus_tag=AL42_RS24055;product=ABC transporter permease;protein_id=WP_003419701.1;transl_table=11 NZ_KK316785.1 RefSeq gene 174352 175977 . - . ID=gene-AL42_RS24060;Name=dppA;gbkey=Gene;gene=dppA;gene_biotype=protein_coding;locus_tag=AL42_RS24060;old_locus_tag=AL42_03805 NZ_KK316785.1 Protein Homology CDS 174352 175977 . - 0 ID=cds-WP_003901692.1;Parent=gene-AL42_RS24060;Dbxref=GenBank:WP_003901692.1;Name=WP_003901692.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;gene=dppA;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218183.1;locus_tag=AL42_RS24060;product=peptide ABC transporter substrate-binding protein;protein_id=WP_003901692.1;transl_table=11 NZ_KK316785.1 RefSeq gene 176685 178640 . + . ID=gene-AL42_RS24065;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=AL42_RS24065;old_locus_tag=AL42_03807 NZ_KK316785.1 Protein Homology CDS 176685 178640 . + 0 ID=cds-WP_003899631.1;Parent=gene-AL42_RS24065;Dbxref=GenBank:WP_003899631.1;Name=WP_003899631.1;Ontology_term=GO:0019427,GO:0003987,GO:0016208;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA,AMP binding|0016208||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218184.1;locus_tag=AL42_RS24065;product=acetate--CoA ligase;protein_id=WP_003899631.1;transl_table=11 NZ_KK316785.1 RefSeq gene 178676 179374 . - . ID=gene-AL42_RS24070;Name=AL42_RS24070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24070;old_locus_tag=AL42_03808 NZ_KK316785.1 Protein Homology CDS 178676 179374 . - 0 ID=cds-WP_003419708.1;Parent=gene-AL42_RS24070;Dbxref=GenBank:WP_003419708.1;Name=WP_003419708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218185.1;locus_tag=AL42_RS24070;product=protease;protein_id=WP_003419708.1;transl_table=11 NZ_KK316785.1 RefSeq gene 179720 180238 . + . ID=gene-AL42_RS24075;Name=AL42_RS24075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24075;old_locus_tag=AL42_03809 NZ_KK316785.1 Protein Homology CDS 179720 180238 . + 0 ID=cds-WP_003419710.1;Parent=gene-AL42_RS24075;Dbxref=GenBank:WP_003419710.1;Name=WP_003419710.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218186.1;locus_tag=AL42_RS24075;product=phage holin family protein;protein_id=WP_003419710.1;transl_table=11 NZ_KK316785.1 RefSeq gene 180239 181222 . + . ID=gene-AL42_RS24080;Name=ephE;gbkey=Gene;gene=ephE;gene_biotype=protein_coding;locus_tag=AL42_RS24080;old_locus_tag=AL42_03810 NZ_KK316785.1 Protein Homology CDS 180239 181222 . + 0 ID=cds-WP_003419712.1;Parent=gene-AL42_RS24080;Dbxref=GenBank:WP_003419712.1;Name=WP_003419712.1;gbkey=CDS;gene=ephE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218187.1;locus_tag=AL42_RS24080;product=alpha/beta fold hydrolase;protein_id=WP_003419712.1;transl_table=11 NZ_KK316785.1 RefSeq gene 181215 182408 . - . ID=gene-AL42_RS24085;Name=marP;gbkey=Gene;gene=marP;gene_biotype=protein_coding;locus_tag=AL42_RS24085;old_locus_tag=AL42_03811 NZ_KK316785.1 Protein Homology CDS 181215 182408 . - 0 ID=cds-WP_003419714.1;Parent=gene-AL42_RS24085;Dbxref=GenBank:WP_003419714.1;Name=WP_003419714.1;gbkey=CDS;gene=marP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218188.1;locus_tag=AL42_RS24085;product=acid resistance serine protease MarP;protein_id=WP_003419714.1;transl_table=11 NZ_KK316785.1 RefSeq gene 182414 183235 . - . ID=gene-AL42_RS24090;Name=AL42_RS24090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24090;old_locus_tag=AL42_03812 NZ_KK316785.1 Protein Homology CDS 182414 183235 . - 0 ID=cds-WP_003419718.1;Parent=gene-AL42_RS24090;Dbxref=GenBank:WP_003419718.1;Name=WP_003419718.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218189.1;locus_tag=AL42_RS24090;product=NUDIX hydrolase;protein_id=WP_003419718.1;transl_table=11 NZ_KK316785.1 RefSeq gene 183367 184014 . - . ID=gene-AL42_RS24095;Name=AL42_RS24095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24095;old_locus_tag=AL42_03813 NZ_KK316785.1 Protein Homology CDS 183367 184014 . - 0 ID=cds-WP_003912310.1;Parent=gene-AL42_RS24095;Dbxref=GenBank:WP_003912310.1;Name=WP_003912310.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912310.1;locus_tag=AL42_RS24095;product=TlpA family protein disulfide reductase;protein_id=WP_003912310.1;transl_table=11 NZ_KK316785.1 RefSeq gene 184050 184787 . - . ID=gene-AL42_RS24100;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=AL42_RS24100;old_locus_tag=AL42_03814 NZ_KK316785.1 Protein Homology CDS 184050 184787 . - 0 ID=cds-WP_003902541.1;Parent=gene-AL42_RS24100;Dbxref=GenBank:WP_003902541.1;Name=WP_003902541.1;Ontology_term=GO:0006281,GO:0140078;gbkey=CDS;gene=nth;go_function=class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218191.2;locus_tag=AL42_RS24100;product=endonuclease III;protein_id=WP_003902541.1;transl_table=11 NZ_KK316785.1 RefSeq gene 184895 185272 . + . ID=gene-AL42_RS24105;Name=AL42_RS24105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24105;old_locus_tag=AL42_03815 NZ_KK316785.1 Protein Homology CDS 184895 185272 . + 0 ID=cds-WP_003899635.1;Parent=gene-AL42_RS24105;Dbxref=GenBank:WP_003899635.1;Name=WP_003899635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218192.1;locus_tag=AL42_RS24105;product=hypothetical protein;protein_id=WP_003899635.1;transl_table=11 NZ_KK316785.1 RefSeq gene 185371 186045 . + . ID=gene-AL42_RS24110;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=AL42_RS24110;old_locus_tag=AL42_03816 NZ_KK316785.1 Protein Homology CDS 185371 186045 . + 0 ID=cds-WP_003906177.1;Parent=gene-AL42_RS24110;Dbxref=GenBank:WP_003906177.1;Name=WP_003906177.1;gbkey=CDS;gene=crp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218193.1;locus_tag=AL42_RS24110;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_003906177.1;transl_table=11 NZ_KK316785.1 RefSeq gene 186151 186945 . - . ID=gene-AL42_RS24115;Name=AL42_RS24115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24115;old_locus_tag=AL42_03817 NZ_KK316785.1 Protein Homology CDS 186151 186945 . - 0 ID=cds-WP_003419731.1;Parent=gene-AL42_RS24115;Dbxref=GenBank:WP_003419731.1;Name=WP_003419731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218194.1;locus_tag=AL42_RS24115;product=MBL fold metallo-hydrolase;protein_id=WP_003419731.1;transl_table=11 NZ_KK316785.1 RefSeq gene 186952 187407 . - . ID=gene-AL42_RS24120;Name=AL42_RS24120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24120;old_locus_tag=AL42_03818 NZ_KK316785.1 Protein Homology CDS 186952 187407 . - 0 ID=cds-WP_003419733.1;Parent=gene-AL42_RS24120;Dbxref=GenBank:WP_003419733.1;Name=WP_003419733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218195.1;locus_tag=AL42_RS24120;product=RidA family protein;protein_id=WP_003419733.1;transl_table=11 NZ_KK316785.1 RefSeq gene 187423 187584 . - . ID=gene-AL42_RS24125;Name=AL42_RS24125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24125;old_locus_tag=AL42_03819 NZ_KK316785.1 Protein Homology CDS 187423 187584 . - 0 ID=cds-WP_003419736.1;Parent=gene-AL42_RS24125;Dbxref=GenBank:WP_003419736.1;Name=WP_003419736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178004.1;locus_tag=AL42_RS24125;product=Sp36 family protein;protein_id=WP_003419736.1;transl_table=11 NZ_KK316785.1 RefSeq gene 187669 188691 . + . ID=gene-AL42_RS24130;Name=AL42_RS24130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24130;old_locus_tag=AL42_03820 NZ_KK316785.1 Protein Homology CDS 187669 188691 . + 0 ID=cds-WP_003419738.1;Parent=gene-AL42_RS24130;Dbxref=GenBank:WP_003419738.1;Name=WP_003419738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218196.1;locus_tag=AL42_RS24130;product=ATPase BagA;protein_id=WP_003419738.1;transl_table=11 NZ_KK316785.1 RefSeq gene 188688 189848 . + . ID=gene-AL42_RS24135;Name=AL42_RS24135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24135;old_locus_tag=AL42_03821 NZ_KK316785.1 Protein Homology CDS 188688 189848 . + 0 ID=cds-WP_003902543.1;Parent=gene-AL42_RS24135;Dbxref=GenBank:WP_003902543.1;Name=WP_003902543.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218197.1;locus_tag=AL42_RS24135;product=ATPase BagB;protein_id=WP_003902543.1;transl_table=11 NZ_KK316785.1 RefSeq gene 190262 190618 . - . ID=gene-AL42_RS24140;Name=whiB4;gbkey=Gene;gene=whiB4;gene_biotype=protein_coding;locus_tag=AL42_RS24140;old_locus_tag=AL42_03822 NZ_KK316785.1 Protein Homology CDS 190262 190618 . - 0 ID=cds-WP_003419743.1;Parent=gene-AL42_RS24140;Dbxref=GenBank:WP_003419743.1;Name=WP_003419743.1;gbkey=CDS;gene=whiB4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218198.2;locus_tag=AL42_RS24140;product=transcriptional regulator WhiB4;protein_id=WP_003419743.1;transl_table=11 NZ_KK316785.1 RefSeq gene 190980 193412 . + . ID=gene-AL42_RS24145;Name=ponA2;gbkey=Gene;gene=ponA2;gene_biotype=protein_coding;locus_tag=AL42_RS24145;old_locus_tag=AL42_03823 NZ_KK316785.1 Protein Homology CDS 190980 193412 . + 0 ID=cds-WP_003906179.1;Parent=gene-AL42_RS24145;Dbxref=GenBank:WP_003906179.1;Name=WP_003906179.1;gbkey=CDS;gene=ponA2;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178005.1;locus_tag=AL42_RS24145;product=transglycosylase/D%2CD-transpeptidase PonA2;protein_id=WP_003906179.1;transl_table=11 NZ_KK316785.1 RefSeq gene 193479 194438 . + . ID=gene-AL42_RS24150;Name=AL42_RS24150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24150;old_locus_tag=AL42_03824 NZ_KK316785.1 Protein Homology CDS 193479 194438 . + 0 ID=cds-WP_003899637.1;Parent=gene-AL42_RS24150;Dbxref=GenBank:WP_003899637.1;Name=WP_003899637.1;Ontology_term=GO:0016311,GO:0042578,GO:0046872;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218200.1;locus_tag=AL42_RS24150;product=metallophosphoesterase;protein_id=WP_003899637.1;transl_table=11 NZ_KK316785.1 RefSeq gene 194435 195541 . + . ID=gene-AL42_RS24155;Name=AL42_RS24155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24155;old_locus_tag=AL42_03825 NZ_KK316785.1 Protein Homology CDS 194435 195541 . + 0 ID=cds-WP_003419750.1;Parent=gene-AL42_RS24155;Dbxref=GenBank:WP_003419750.1;Name=WP_003419750.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003419750.1;locus_tag=AL42_RS24155;product=L-cysteine desulfhydrase Cds1;protein_id=WP_003419750.1;transl_table=11 NZ_KK316785.1 RefSeq gene 195603 195676 . + . ID=gene-AL42_RS24160;Name=AL42_RS24160;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL42_RS24160;old_locus_tag=AL42_03826 NZ_KK316785.1 tRNAscan-SE tRNA 195603 195676 . + . ID=rna-AL42_RS24160;Parent=gene-AL42_RS24160;anticodon=(pos:195637..195639);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS24160;product=tRNA-Pro NZ_KK316785.1 tRNAscan-SE exon 195603 195676 . + . ID=exon-AL42_RS24160-1;Parent=rna-AL42_RS24160;anticodon=(pos:195637..195639);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS24160;product=tRNA-Pro NZ_KK316785.1 RefSeq pseudogene 196099 196323 . + . ID=gene-AL42_RS28050;Name=AL42_RS28050;end_range=196323,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS28050;partial=true;pseudo=true;start_range=.,196099 NZ_KK316785.1 Protein Homology CDS 196099 196323 . + 0 ID=cds-AL42_RS28050;Parent=gene-AL42_RS28050;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=196323,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014691.6;locus_tag=AL42_RS28050;partial=true;product=Fic family protein;pseudo=true;start_range=.,196099;transl_table=11 NZ_KK316785.1 RefSeq gene 196357 197787 . - . ID=gene-AL42_RS24165;Name=AL42_RS24165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24165;old_locus_tag=AL42_03827 NZ_KK316785.1 Protein Homology CDS 196357 197787 . - 0 ID=cds-WP_003419754.1;Parent=gene-AL42_RS24165;Dbxref=GenBank:WP_003419754.1;Name=WP_003419754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218202.1;locus_tag=AL42_RS24165;product=cytochrome P450;protein_id=WP_003419754.1;transl_table=11 NZ_KK316785.1 RefSeq gene 197813 198145 . - . ID=gene-AL42_RS24170;Name=AL42_RS24170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24170;old_locus_tag=AL42_03828 NZ_KK316785.1 Protein Homology CDS 197813 198145 . - 0 ID=cds-WP_003901696.1;Parent=gene-AL42_RS24170;Dbxref=GenBank:WP_003901696.1;Name=WP_003901696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218203.1;locus_tag=AL42_RS24170;product=hypothetical protein;protein_id=WP_003901696.1;transl_table=11 NZ_KK316785.1 RefSeq gene 198385 198753 . - . ID=gene-AL42_RS24175;Name=rsfB;gbkey=Gene;gene=rsfB;gene_biotype=protein_coding;locus_tag=AL42_RS24175;old_locus_tag=AL42_03829 NZ_KK316785.1 Protein Homology CDS 198385 198753 . - 0 ID=cds-WP_003419762.1;Parent=gene-AL42_RS24175;Dbxref=GenBank:WP_003419762.1;Name=WP_003419762.1;Ontology_term=GO:0006355,GO:0043856;gbkey=CDS;gene=rsfB;go_function=anti-sigma factor antagonist activity|0043856||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218204.1;locus_tag=AL42_RS24175;product=STAS domain-containing protein;protein_id=WP_003419762.1;transl_table=11 NZ_KK316785.1 RefSeq gene 198955 199419 . - . ID=gene-AL42_RS24180;Name=AL42_RS24180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24180;old_locus_tag=AL42_03830 NZ_KK316785.1 Protein Homology CDS 198955 199419 . - 0 ID=cds-WP_003419765.1;Parent=gene-AL42_RS24180;Dbxref=GenBank:WP_003419765.1;Name=WP_003419765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218205.1;locus_tag=AL42_RS24180;product=GatB/YqeY domain-containing protein;protein_id=WP_003419765.1;transl_table=11 NZ_KK316785.1 RefSeq gene 199419 200774 . + . ID=gene-AL42_RS24185;Name=AL42_RS24185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24185;old_locus_tag=AL42_03831 NZ_KK316785.1 Protein Homology CDS 199419 200774 . + 0 ID=cds-WP_003899640.1;Parent=gene-AL42_RS24185;Dbxref=GenBank:WP_003899640.1;Name=WP_003899640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631611.1;locus_tag=AL42_RS24185;product=DUF7847 domain-containing protein;protein_id=WP_003899640.1;transl_table=11 NZ_KK316785.1 RefSeq gene 200801 201454 . + . ID=gene-AL42_RS24190;Name=AL42_RS24190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24190;old_locus_tag=AL42_03832 NZ_KK316785.1 Protein Homology CDS 200801 201454 . + 0 ID=cds-WP_003419770.1;Parent=gene-AL42_RS24190;Dbxref=GenBank:WP_003419770.1;Name=WP_003419770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218207.1;locus_tag=AL42_RS24190;product=DUF4129 domain-containing protein;protein_id=WP_003419770.1;transl_table=11 NZ_KK316785.1 RefSeq gene 201436 202581 . + . ID=gene-AL42_RS24195;Name=AL42_RS24195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24195;old_locus_tag=AL42_03833 NZ_KK316785.1 Protein Homology CDS 201436 202581 . + 0 ID=cds-WP_016810355.1;Parent=gene-AL42_RS24195;Dbxref=GenBank:WP_016810355.1;Name=WP_016810355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899642.1;locus_tag=AL42_RS24195;product=DUF4350 domain-containing protein;protein_id=WP_016810355.1;transl_table=11 NZ_KK316785.1 RefSeq gene 202578 203654 . + . ID=gene-AL42_RS24200;Name=AL42_RS24200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24200;old_locus_tag=AL42_03834 NZ_KK316785.1 Protein Homology CDS 202578 203654 . + 0 ID=cds-WP_003419775.1;Parent=gene-AL42_RS24200;Dbxref=GenBank:WP_003419775.1;Name=WP_003419775.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218209.1;locus_tag=AL42_RS24200;product=AAA family ATPase;protein_id=WP_003419775.1;transl_table=11 NZ_KK316785.1 RefSeq pseudogene 203663 203734 . + . ID=gene-AL42_RS28210;Name=AL42_RS28210;end_range=203734,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS28210;partial=true;pseudo=true NZ_KK316785.1 Protein Homology CDS 203663 203734 . + 0 ID=cds-AL42_RS28210;Parent=gene-AL42_RS28210;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=203734,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215065.1;locus_tag=AL42_RS28210;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_KK316785.1 RefSeq gene 203788 205110 . + . ID=gene-AL42_RS24205;Name=AL42_RS24205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24205;old_locus_tag=AL42_03835 NZ_KK316785.1 Protein Homology CDS 203788 205110 . + 0 ID=cds-WP_003419776.1;Parent=gene-AL42_RS24205;Dbxref=GenBank:WP_003419776.1;Name=WP_003419776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218210.1;locus_tag=AL42_RS24205;product=DUF58 domain-containing protein;protein_id=WP_003419776.1;transl_table=11 NZ_KK316785.1 RefSeq gene 205184 206176 . - . ID=gene-AL42_RS24210;Name=AL42_RS24210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24210;old_locus_tag=AL42_03836 NZ_KK316785.1 Protein Homology CDS 205184 206176 . - 0 ID=cds-WP_003419778.1;Parent=gene-AL42_RS24210;Dbxref=GenBank:WP_003419778.1;Name=WP_003419778.1;Ontology_term=GO:0030435,GO:0042173,GO:1901893;gbkey=CDS;go_process=sporulation resulting in formation of a cellular spore|0030435||IEA,regulation of sporulation resulting in formation of a cellular spore|0042173||IEA,positive regulation of cell septum assembly|1901893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218211.1;locus_tag=AL42_RS24210;product=stage II sporulation protein M;protein_id=WP_003419778.1;transl_table=11 NZ_KK316785.1 RefSeq gene 206268 207200 . + . ID=gene-AL42_RS24215;Name=AL42_RS24215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24215;old_locus_tag=AL42_03837 NZ_KK316785.1 Protein Homology CDS 206268 207200 . + 0 ID=cds-WP_003419780.1;Parent=gene-AL42_RS24215;Dbxref=GenBank:WP_003419780.1;Name=WP_003419780.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218212.1;locus_tag=AL42_RS24215;product=RDD family protein;protein_id=WP_003419780.1;transl_table=11 NZ_KK316785.1 RefSeq gene 207264 208817 . - . ID=gene-AL42_RS24220;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=AL42_RS24220;old_locus_tag=AL42_03838 NZ_KK316785.1 Protein Homology CDS 207264 208817 . - 0 ID=cds-WP_003899643.1;Parent=gene-AL42_RS24220;Dbxref=GenBank:WP_003899643.1;Name=WP_003899643.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218213.1;locus_tag=AL42_RS24220;product=glycerol kinase GlpK;protein_id=WP_003899643.1;transl_table=11 NZ_KK316785.1 RefSeq gene 208867 209304 . - . ID=gene-AL42_RS24225;Name=AL42_RS24225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24225;old_locus_tag=AL42_03839 NZ_KK316785.1 Protein Homology CDS 208867 209304 . - 0 ID=cds-WP_003899644.1;Parent=gene-AL42_RS24225;Dbxref=GenBank:WP_003899644.1;Name=WP_003899644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218214.1;locus_tag=AL42_RS24225;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_003899644.1;transl_table=11 NZ_KK316785.1 RefSeq gene 209301 209525 . - . ID=gene-AL42_RS24230;Name=AL42_RS24230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24230;old_locus_tag=AL42_03840 NZ_KK316785.1 Protein Homology CDS 209301 209525 . - 0 ID=cds-WP_003419787.1;Parent=gene-AL42_RS24230;Dbxref=GenBank:WP_003419787.1;Name=WP_003419787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_007412423.1;locus_tag=AL42_RS24230;product=antitoxin VapB48;protein_id=WP_003419787.1;transl_table=11 NZ_KK316785.1 RefSeq gene 209612 211084 . + . ID=gene-AL42_RS24235;Name=AL42_RS24235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24235;old_locus_tag=AL42_03841 NZ_KK316785.1 Protein Homology CDS 209612 211084 . + 0 ID=cds-WP_003419790.1;Parent=gene-AL42_RS24235;Dbxref=GenBank:WP_003419790.1;Name=WP_003419790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003419790.1;locus_tag=AL42_RS24235;product=glutamate-cysteine ligase family protein;protein_id=WP_003419790.1;transl_table=11 NZ_KK316785.1 RefSeq gene 211106 211807 . + . ID=gene-AL42_RS24240;Name=AL42_RS24240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24240;old_locus_tag=AL42_03842 NZ_KK316785.1 Protein Homology CDS 211106 211807 . + 0 ID=cds-WP_003419793.1;Parent=gene-AL42_RS24240;Dbxref=GenBank:WP_003419793.1;Name=WP_003419793.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218216.1;locus_tag=AL42_RS24240;product=class I SAM-dependent methyltransferase;protein_id=WP_003419793.1;transl_table=11 NZ_KK316785.1 RefSeq gene 211810 212982 . - . ID=gene-AL42_RS24245;Name=egtE;gbkey=Gene;gene=egtE;gene_biotype=protein_coding;locus_tag=AL42_RS24245;old_locus_tag=AL42_03843 NZ_KK316785.1 Protein Homology CDS 211810 212982 . - 0 ID=cds-WP_003901701.1;Parent=gene-AL42_RS24245;Dbxref=GenBank:WP_003901701.1;Name=WP_003901701.1;Ontology_term=GO:0052699,GO:0016829;gbkey=CDS;gene=egtE;go_function=lyase activity|0016829||IEA;go_process=ergothioneine biosynthetic process|0052699||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218217.1;locus_tag=AL42_RS24245;product=ergothioneine biosynthesis PLP-dependent enzyme EgtE;protein_id=WP_003901701.1;transl_table=11 NZ_KK316785.1 RefSeq gene 213013 213978 . - . ID=gene-AL42_RS24250;Name=egtD;gbkey=Gene;gene=egtD;gene_biotype=protein_coding;locus_tag=AL42_RS24250;old_locus_tag=AL42_03844 NZ_KK316785.1 Protein Homology CDS 213013 213978 . - 0 ID=cds-WP_003419799.1;Parent=gene-AL42_RS24250;Dbxref=GenBank:WP_003419799.1;Name=WP_003419799.1;Ontology_term=GO:0052699,GO:0052706;gbkey=CDS;gene=egtD;go_function=L-histidine N(alpha)-methyltransferase activity|0052706||IEA;go_process=ergothioneine biosynthetic process|0052699||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218218.1;locus_tag=AL42_RS24250;product=L-histidine N(alpha)-methyltransferase;protein_id=WP_003419799.1;transl_table=11 NZ_KK316785.1 RefSeq gene 213975 214676 . - . ID=gene-AL42_RS24255;Name=egtC;gbkey=Gene;gene=egtC;gene_biotype=protein_coding;locus_tag=AL42_RS24255;old_locus_tag=AL42_03845 NZ_KK316785.1 Protein Homology CDS 213975 214676 . - 0 ID=cds-WP_003419806.1;Parent=gene-AL42_RS24255;Dbxref=GenBank:WP_003419806.1;Name=WP_003419806.1;Ontology_term=GO:0052699;gbkey=CDS;gene=egtC;go_process=ergothioneine biosynthetic process|0052699||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218219.1;locus_tag=AL42_RS24255;product=ergothioneine biosynthesis protein EgtC;protein_id=WP_003419806.1;transl_table=11 NZ_KK316785.1 RefSeq gene 214676 215953 . - . ID=gene-AL42_RS24260;Name=egtB;gbkey=Gene;gene=egtB;gene_biotype=protein_coding;locus_tag=AL42_RS24260;old_locus_tag=AL42_03846 NZ_KK316785.1 Protein Homology CDS 214676 215953 . - 0 ID=cds-WP_003419808.1;Parent=gene-AL42_RS24260;Dbxref=GenBank:WP_003419808.1;Name=WP_003419808.1;Ontology_term=GO:0052699;gbkey=CDS;gene=egtB;go_process=ergothioneine biosynthetic process|0052699||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218220.1;locus_tag=AL42_RS24260;product=ergothioneine biosynthesis protein EgtB;protein_id=WP_003419808.1;transl_table=11 NZ_KK316785.1 RefSeq gene 215950 217248 . - . ID=gene-AL42_RS24265;Name=egtA;gbkey=Gene;gene=egtA;gene_biotype=protein_coding;locus_tag=AL42_RS24265;old_locus_tag=AL42_03847 NZ_KK316785.1 Protein Homology CDS 215950 217248 . - 0 ID=cds-WP_003419809.1;Parent=gene-AL42_RS24265;Dbxref=GenBank:WP_003419809.1;Name=WP_003419809.1;Ontology_term=GO:0052699,GO:0004357;gbkey=CDS;gene=egtA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=ergothioneine biosynthetic process|0052699||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218221.1;locus_tag=AL42_RS24265;product=ergothioneine biosynthesis glutamate--cysteine ligase EgtA;protein_id=WP_003419809.1;transl_table=11 NZ_KK316785.1 RefSeq gene 217380 218024 . - . ID=gene-AL42_RS24270;Name=AL42_RS24270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24270;old_locus_tag=AL42_03848 NZ_KK316785.1 Protein Homology CDS 217380 218024 . - 0 ID=cds-WP_003419812.1;Parent=gene-AL42_RS24270;Dbxref=GenBank:WP_003419812.1;Name=WP_003419812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218222.1;locus_tag=AL42_RS24270;product=sensor domain-containing protein;protein_id=WP_003419812.1;transl_table=11 NZ_KK316785.1 RefSeq gene 218153 218542 . - . ID=gene-AL42_RS24275;Name=AL42_RS24275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24275;old_locus_tag=AL42_03849 NZ_KK316785.1 Protein Homology CDS 218153 218542 . - 0 ID=cds-WP_003419814.1;Parent=gene-AL42_RS24275;Dbxref=GenBank:WP_003419814.1;Name=WP_003419814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178006.1;locus_tag=AL42_RS24275;product=hypothetical protein;protein_id=WP_003419814.1;transl_table=11 NZ_KK316785.1 RefSeq gene 218653 218973 . - . ID=gene-AL42_RS24280;Name=AL42_RS24280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24280;old_locus_tag=AL42_03850 NZ_KK316785.1 Protein Homology CDS 218653 218973 . - 0 ID=cds-WP_003419816.1;Parent=gene-AL42_RS24280;Dbxref=GenBank:WP_003419816.1;Name=WP_003419816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218223.1;locus_tag=AL42_RS24280;product=hypothetical protein;protein_id=WP_003419816.1;transl_table=11 NZ_KK316785.1 RefSeq gene 219092 220240 . - . ID=gene-AL42_RS24285;Name=AL42_RS24285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24285;old_locus_tag=AL42_03851 NZ_KK316785.1 Protein Homology CDS 219092 220240 . - 0 ID=cds-WP_003899648.1;Parent=gene-AL42_RS24285;Dbxref=GenBank:WP_003899648.1;Name=WP_003899648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016719265.1;locus_tag=AL42_RS24285;product=DUF4185 domain-containing protein;protein_id=WP_003899648.1;transl_table=11 NZ_KK316785.1 RefSeq gene 220242 221279 . - . ID=gene-AL42_RS24290;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=AL42_RS24290;old_locus_tag=AL42_03852 NZ_KK316785.1 Protein Homology CDS 220242 221279 . - 0 ID=cds-WP_003419825.1;Parent=gene-AL42_RS24290;Dbxref=GenBank:WP_003419825.1;Name=WP_003419825.1;Ontology_term=GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0004073,GO:0050661;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,NADP binding|0050661||IEA;go_process=methionine biosynthetic process|0009086||IEA,threonine biosynthetic process|0009088||IEA,lysine biosynthetic process via diaminopimelate|0009089||IEA,isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218225.1;locus_tag=AL42_RS24290;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_003419825.1;transl_table=11 NZ_KK316785.1 RefSeq gene 221280 222545 . - . ID=gene-AL42_RS24295;Name=ask;gbkey=Gene;gene=ask;gene_biotype=protein_coding;locus_tag=AL42_RS24295;old_locus_tag=AL42_03853 NZ_KK316785.1 Protein Homology CDS 221280 222545 . - 0 ID=cds-WP_003419828.1;Parent=gene-AL42_RS24295;Dbxref=GenBank:WP_003419828.1;Name=WP_003419828.1;Ontology_term=GO:0008652,GO:0004072;gbkey=CDS;gene=ask;go_function=aspartate kinase activity|0004072||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218226.1;locus_tag=AL42_RS24295;product=aspartate kinase;protein_id=WP_003419828.1;transl_table=11 NZ_KK316785.1 RefSeq gene 222802 224736 . + . ID=gene-AL42_RS24300;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=AL42_RS24300;old_locus_tag=AL42_03854 NZ_KK316785.1 Protein Homology CDS 222802 224736 . + 0 ID=cds-WP_003902547.1;Parent=gene-AL42_RS24300;Dbxref=GenBank:WP_003902547.1;Name=WP_003902547.1;Ontology_term=GO:0009098,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218227.3;locus_tag=AL42_RS24300;product=2-isopropylmalate synthase;protein_id=WP_003902547.1;transl_table=11 NZ_KK316785.1 RefSeq gene 224802 225791 . - . ID=gene-AL42_RS24305;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=AL42_RS24305;old_locus_tag=AL42_03855 NZ_KK316785.1 Protein Homology CDS 224802 225791 . - 0 ID=cds-WP_003901704.1;Parent=gene-AL42_RS24305;Dbxref=GenBank:WP_003901704.1;Name=WP_003901704.1;Ontology_term=GO:0006260,GO:0003677;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218228.1;locus_tag=AL42_RS24305;product=DEDDh family exonuclease;protein_id=WP_003901704.1;transl_table=11 NZ_KK316785.1 RefSeq gene 226102 227343 . + . ID=gene-AL42_RS24310;Name=AL42_RS24310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24310;old_locus_tag=AL42_03856 NZ_KK316785.1 Protein Homology CDS 226102 227343 . + 0 ID=cds-WP_003900738.1;Parent=gene-AL42_RS24310;Dbxref=GenBank:WP_003900738.1;Name=WP_003900738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218229.1;locus_tag=AL42_RS24310;product=Mur ligase family protein;protein_id=WP_003900738.1;transl_table=11 NZ_KK316785.1 RefSeq gene 227348 228043 . + . ID=gene-AL42_RS24315;Name=AL42_RS24315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24315;old_locus_tag=AL42_03857 NZ_KK316785.1 Protein Homology CDS 227348 228043 . + 0 ID=cds-WP_003900739.1;Parent=gene-AL42_RS24315;Dbxref=GenBank:WP_003900739.1;Name=WP_003900739.1;Ontology_term=GO:0004359;gbkey=CDS;go_function=glutaminase activity|0004359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218230.1;locus_tag=AL42_RS24315;product=type 1 glutamine amidotransferase;protein_id=WP_003900739.1;transl_table=11 NZ_KK316785.1 RefSeq gene 228052 228942 . - . ID=gene-AL42_RS24320;Name=AL42_RS24320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24320;old_locus_tag=AL42_03858 NZ_KK316785.1 Protein Homology CDS 228052 228942 . - 0 ID=cds-WP_003420405.1;Parent=gene-AL42_RS24320;Dbxref=GenBank:WP_003420405.1;Name=WP_003420405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218231.1;locus_tag=AL42_RS24320;product=hypothetical protein;protein_id=WP_003420405.1;transl_table=11 NZ_KK316785.1 RefSeq gene 229010 229621 . - . ID=gene-AL42_RS24325;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=AL42_RS24325;old_locus_tag=AL42_03859 NZ_KK316785.1 Protein Homology CDS 229010 229621 . - 0 ID=cds-WP_003906193.1;Parent=gene-AL42_RS24325;Dbxref=GenBank:WP_003906193.1;Name=WP_003906193.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218232.1;locus_tag=AL42_RS24325;product=recombination mediator RecR;protein_id=WP_003906193.1;transl_table=11 NZ_KK316785.1 RefSeq gene 229633 230034 . - . ID=gene-AL42_RS24330;Name=AL42_RS24330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24330;old_locus_tag=AL42_03860 NZ_KK316785.1 Protein Homology CDS 229633 230034 . - 0 ID=cds-WP_003420408.1;Parent=gene-AL42_RS24330;Dbxref=GenBank:WP_003420408.1;Name=WP_003420408.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218233.1;locus_tag=AL42_RS24330;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_003420408.1;transl_table=11 NZ_KK316785.1 RefSeq gene 230133 230894 . + . ID=gene-AL42_RS24335;Name=AL42_RS24335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24335;old_locus_tag=AL42_03861 NZ_KK316785.1 Protein Homology CDS 230133 230894 . + 0 ID=cds-WP_003912326.1;Parent=gene-AL42_RS24335;Dbxref=GenBank:WP_003912326.1;Name=WP_003912326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912326.1;locus_tag=AL42_RS24335;product=Rv3717 family N-acetylmuramoyl-L-alanine amidase;protein_id=WP_003912326.1;transl_table=11 NZ_KK316785.1 RefSeq gene 230936 231379 . - . ID=gene-AL42_RS24340;Name=AL42_RS24340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24340;old_locus_tag=AL42_03862 NZ_KK316785.1 Protein Homology CDS 230936 231379 . - 0 ID=cds-WP_003899651.1;Parent=gene-AL42_RS24340;Dbxref=GenBank:WP_003899651.1;Name=WP_003899651.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218235.1;locus_tag=AL42_RS24340;product=SRPBCC family protein;protein_id=WP_003899651.1;transl_table=11 NZ_KK316785.1 RefSeq gene 231427 232839 . + . ID=gene-AL42_RS24345;Name=AL42_RS24345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24345;old_locus_tag=AL42_03863 NZ_KK316785.1 Protein Homology CDS 231427 232839 . + 0 ID=cds-WP_003420413.1;Parent=gene-AL42_RS24345;Dbxref=GenBank:WP_003420413.1;Name=WP_003420413.1;Ontology_term=GO:0050660;gbkey=CDS;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013128575.1;locus_tag=AL42_RS24345;product=FAD-binding oxidoreductase;protein_id=WP_003420413.1;transl_table=11 NZ_KK316785.1 RefSeq gene 232836 234119 . + . ID=gene-AL42_RS24350;Name=AL42_RS24350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24350;old_locus_tag=AL42_03864 NZ_KK316785.1 Protein Homology CDS 232836 234119 . + 0 ID=cds-WP_003899652.1;Parent=gene-AL42_RS24350;Dbxref=GenBank:WP_003899652.1;Name=WP_003899652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899652.1;locus_tag=AL42_RS24350;product=class I SAM-dependent methyltransferase;protein_id=WP_003899652.1;transl_table=11 NZ_KK316785.1 RefSeq gene 234116 235852 . - . ID=gene-AL42_RS24355;Name=dnaZX;gbkey=Gene;gene=dnaZX;gene_biotype=protein_coding;locus_tag=AL42_RS24355;old_locus_tag=AL42_03865 NZ_KK316785.1 Protein Homology CDS 234116 235852 . - 0 ID=cds-WP_003420417.1;Parent=gene-AL42_RS24355;Dbxref=GenBank:WP_003420417.1;Name=WP_003420417.1;gbkey=CDS;gene=dnaZX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218238.1;locus_tag=AL42_RS24355;product=DNA polymerase III subunits gamma/tau;protein_id=WP_003420417.1;transl_table=11 NZ_KK316785.1 RefSeq gene 235942 237249 . - . ID=gene-AL42_RS24360;Name=AL42_RS24360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24360;old_locus_tag=AL42_03866 NZ_KK316785.1 Protein Homology CDS 235942 237249 . - 0 ID=cds-WP_003901708.1;Parent=gene-AL42_RS24360;Dbxref=GenBank:WP_003901708.1;Name=WP_003901708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218239.2;locus_tag=AL42_RS24360;product=aspartate aminotransferase type Ic;protein_id=WP_003901708.1;transl_table=11 NZ_KK316785.1 RefSeq gene 237311 237405 . - . ID=gene-AL42_RS26645;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=AL42_RS26645 NZ_KK316785.1 cmsearch SRP_RNA 237311 237405 . - . ID=rna-AL42_RS26645;Parent=gene-AL42_RS26645;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AL42_RS26645;product=signal recognition particle sRNA small type NZ_KK316785.1 cmsearch exon 237311 237405 . - . ID=exon-AL42_RS26645-1;Parent=rna-AL42_RS26645;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AL42_RS26645;product=signal recognition particle sRNA small type NZ_KK316785.1 RefSeq gene 237466 237554 . + . ID=gene-AL42_RS24365;Name=AL42_RS24365;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL42_RS24365;old_locus_tag=AL42_03867 NZ_KK316785.1 tRNAscan-SE tRNA 237466 237554 . + . ID=rna-AL42_RS24365;Parent=gene-AL42_RS24365;anticodon=(pos:237500..237502);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS24365;product=tRNA-Ser NZ_KK316785.1 tRNAscan-SE exon 237466 237554 . + . ID=exon-AL42_RS24365-1;Parent=rna-AL42_RS24365;anticodon=(pos:237500..237502);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS24365;product=tRNA-Ser NZ_KK316785.1 RefSeq gene 237657 238421 . + . ID=gene-AL42_RS24370;Name=lucA;gbkey=Gene;gene=lucA;gene_biotype=protein_coding;locus_tag=AL42_RS24370;old_locus_tag=AL42_03868 NZ_KK316785.1 Protein Homology CDS 237657 238421 . + 0 ID=cds-WP_003420421.1;Parent=gene-AL42_RS24370;Dbxref=GenBank:WP_003420421.1;Name=WP_003420421.1;gbkey=CDS;gene=lucA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218240.1;locus_tag=AL42_RS24370;product=lipid uptake coordinator LucA;protein_id=WP_003420421.1;transl_table=11 NZ_KK316785.1 RefSeq pseudogene 238588 239290 . + . ID=gene-AL42_RS24375;Name=AL42_RS24375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS24375;old_locus_tag=AL42_03870;pseudo=true NZ_KK316785.1 Protein Homology CDS 238588 239290 . + 0 ID=cds-AL42_RS24375;Parent=gene-AL42_RS24375;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003420425.1;locus_tag=AL42_RS24375;product=cutinase family protein;pseudo=true;transl_table=11 NZ_KK316785.1 RefSeq gene 239350 240336 . + . ID=gene-AL42_RS0105700;Name=AL42_RS0105700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0105700;old_locus_tag=AL42_03871 NZ_KK316785.1 Protein Homology CDS 239350 240336 . + 0 ID=cds-WP_015575361.1;Parent=gene-AL42_RS0105700;Dbxref=GenBank:WP_015575361.1;Name=WP_015575361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015575361.1;locus_tag=AL42_RS0105700;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_015575361.1;transl_table=11 NZ_KK316785.1 RefSeq gene 240333 240479 . - . ID=gene-AL42_RS27345;Name=AL42_RS27345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27345 NZ_KK316785.1 Protein Homology CDS 240333 240479 . - 0 ID=cds-WP_003420429.1;Parent=gene-AL42_RS27345;Dbxref=GenBank:WP_003420429.1;Name=WP_003420429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003913883.1;locus_tag=AL42_RS27345;product=hypothetical protein;protein_id=WP_003420429.1;transl_table=11 NZ_KK316785.1 RefSeq gene 240543 241736 . + . ID=gene-AL42_RS24380;Name=AL42_RS24380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24380;old_locus_tag=AL42_03872 NZ_KK316785.1 Protein Homology CDS 240543 241736 . + 0 ID=cds-WP_003900742.1;Parent=gene-AL42_RS24380;Dbxref=GenBank:WP_003900742.1;Name=WP_003900742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218243.1;locus_tag=AL42_RS24380;product=zinc-binding dehydrogenase;protein_id=WP_003900742.1;transl_table=11 NZ_KK316785.1 RefSeq gene 242077 243885 . + . ID=gene-AL42_RS24385;Name=AL42_RS24385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24385;old_locus_tag=AL42_03873 NZ_KK316785.1 Protein Homology CDS 242077 243885 . + 0 ID=cds-WP_003901712.1;Parent=gene-AL42_RS24385;Dbxref=GenBank:WP_003901712.1;Name=WP_003901712.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218244.1;locus_tag=AL42_RS24385;product=hydroxysqualene dehydroxylase;protein_id=WP_003901712.1;transl_table=11 NZ_KK316785.1 RefSeq gene 243995 247192 . + . ID=gene-AL42_RS24390;Name=AL42_RS24390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24390;old_locus_tag=AL42_03874 NZ_KK316785.1 Protein Homology CDS 243995 247192 . + 0 ID=cds-WP_003900743.1;Parent=gene-AL42_RS24390;Dbxref=GenBank:WP_003900743.1;Name=WP_003900743.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218245.1;locus_tag=AL42_RS24390;product=MFS transporter;protein_id=WP_003900743.1;transl_table=11 NZ_KK316785.1 RefSeq gene 247371 249737 . + . ID=gene-AL42_RS24395;Name=AL42_RS24395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24395;old_locus_tag=AL42_03875 NZ_KK316785.1 Protein Homology CDS 247371 249737 . + 0 ID=cds-WP_003917950.1;Parent=gene-AL42_RS24395;Dbxref=GenBank:WP_003917950.1;Name=WP_003917950.1;Ontology_term=GO:0003824,GO:0051539;gbkey=CDS;go_function=catalytic activity|0003824||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899656.1;locus_tag=AL42_RS24395;product=radical SAM protein;protein_id=WP_003917950.1;transl_table=11 NZ_KK316785.1 RefSeq gene 249802 250842 . - . ID=gene-AL42_RS24400;Name=ligD;gbkey=Gene;gene=ligD;gene_biotype=protein_coding;locus_tag=AL42_RS24400;old_locus_tag=AL42_03876 NZ_KK316785.1 Protein Homology CDS 249802 250842 . - 0 ID=cds-WP_003899657.1;Parent=gene-AL42_RS24400;Dbxref=GenBank:WP_003899657.1;Name=WP_003899657.1;gbkey=CDS;gene=ligD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218247.1;locus_tag=AL42_RS24400;product=non-homologous end-joining DNA ligase;protein_id=WP_003899657.1;transl_table=11 NZ_KK316785.1 RefSeq gene 250880 251956 . + . ID=gene-AL42_RS24405;Name=ligC;gbkey=Gene;gene=ligC;gene_biotype=protein_coding;locus_tag=AL42_RS24405;old_locus_tag=AL42_03877 NZ_KK316785.1 Protein Homology CDS 250880 251956 . + 0 ID=cds-WP_003420435.1;Parent=gene-AL42_RS24405;Dbxref=GenBank:WP_003420435.1;Name=WP_003420435.1;Ontology_term=GO:0006281,GO:0006310,GO:0003910,GO:0005524;gbkey=CDS;gene=ligC;go_function=DNA ligase (ATP) activity|0003910||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218248.1;locus_tag=AL42_RS24405;product=ATP-dependent DNA ligase;protein_id=WP_003420435.1;transl_table=11 NZ_KK316785.1 RefSeq gene 252056 253114 . + . ID=gene-AL42_RS24410;Name=AL42_RS24410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24410;old_locus_tag=AL42_03878 NZ_KK316785.1 Protein Homology CDS 252056 253114 . + 0 ID=cds-WP_003420436.1;Parent=gene-AL42_RS24410;Dbxref=GenBank:WP_003420436.1;Name=WP_003420436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218249.1;locus_tag=AL42_RS24410;product=DUF2330 domain-containing protein;protein_id=WP_003420436.1;transl_table=11 NZ_KK316785.1 RefSeq gene 253134 253634 . - . ID=gene-AL42_RS24415;Name=AL42_RS24415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24415;old_locus_tag=AL42_03879 NZ_KK316785.1 Protein Homology CDS 253134 253634 . - 0 ID=cds-WP_003420437.1;Parent=gene-AL42_RS24415;Dbxref=GenBank:WP_003420437.1;Name=WP_003420437.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218250.1;locus_tag=AL42_RS24415;product=NUDIX hydrolase;protein_id=WP_003420437.1;transl_table=11 NZ_KK316785.1 RefSeq gene 253648 255012 . - . ID=gene-AL42_RS24420;Name=AL42_RS24420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24420;old_locus_tag=AL42_03880 NZ_KK316785.1 Protein Homology CDS 253648 255012 . - 0 ID=cds-WP_003420440.1;Parent=gene-AL42_RS24420;Dbxref=GenBank:WP_003420440.1;Name=WP_003420440.1;Ontology_term=GO:0045017,GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;go_process=glycerolipid biosynthetic process|0045017||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218251.1;locus_tag=AL42_RS24420;product=WS/DGAT/MGAT family O-acyltransferase;protein_id=WP_003420440.1;transl_table=11 NZ_KK316785.1 RefSeq gene 255211 255699 . + . ID=gene-AL42_RS24425;Name=AL42_RS24425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24425;old_locus_tag=AL42_03881 NZ_KK316785.1 Protein Homology CDS 255211 255699 . + 0 ID=cds-WP_003899658.1;Parent=gene-AL42_RS24425;Dbxref=GenBank:WP_003899658.1;Name=WP_003899658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218252.1;locus_tag=AL42_RS24425;product=adenosine-specific kinase;protein_id=WP_003899658.1;transl_table=11 NZ_KK316785.1 RefSeq gene 255756 256817 . + . ID=gene-AL42_RS24430;Name=AL42_RS24430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24430;old_locus_tag=AL42_03882 NZ_KK316785.1 Protein Homology CDS 255756 256817 . + 0 ID=cds-WP_003899659.1;Parent=gene-AL42_RS24430;Dbxref=GenBank:WP_003899659.1;Name=WP_003899659.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218253.1;locus_tag=AL42_RS24430;product=AraC family transcriptional regulator;protein_id=WP_003899659.1;transl_table=11 NZ_KK316785.1 RefSeq gene 256821 258410 . + . ID=gene-AL42_RS24435;Name=AL42_RS24435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24435;old_locus_tag=AL42_03883 NZ_KK316785.1 Protein Homology CDS 256821 258410 . + 0 ID=cds-WP_003899660.1;Parent=gene-AL42_RS24435;Dbxref=GenBank:WP_003899660.1;Name=WP_003899660.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218254.1;locus_tag=AL42_RS24435;product=threonine/serine exporter family protein;protein_id=WP_003899660.1;transl_table=11 NZ_KK316785.1 RefSeq pseudogene 258407 259639 . - . ID=gene-AL42_RS24440;Name=AL42_RS24440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS24440;old_locus_tag=AL42_03884;pseudo=true NZ_KK316785.1 Protein Homology CDS 258407 259639 . - 0 ID=cds-AL42_RS24440;Parent=gene-AL42_RS24440;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003909072.1;locus_tag=AL42_RS24440;product=PPE family protein;pseudo=true;transl_table=11 NZ_KK316785.1 RefSeq gene 259955 261301 . - . ID=gene-AL42_RS24450;Name=AL42_RS24450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24450;old_locus_tag=AL42_03886 NZ_KK316785.1 Protein Homology CDS 259955 261301 . - 0 ID=cds-WP_003900746.1;Parent=gene-AL42_RS24450;Dbxref=GenBank:WP_003900746.1;Name=WP_003900746.1;Ontology_term=GO:0045017,GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;go_process=glycerolipid biosynthetic process|0045017||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218257.1;locus_tag=AL42_RS24450;product=WS/DGAT/MGAT family O-acyltransferase;protein_id=WP_003900746.1;transl_table=11 NZ_KK316785.1 RefSeq gene 261301 261975 . - . ID=gene-AL42_RS28215;Name=AL42_RS28215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS28215;old_locus_tag=AL42_03887 NZ_KK316785.1 GeneMarkS-2+ CDS 261301 261975 . - 0 ID=cds-WP_003900747.1;Parent=gene-AL42_RS28215;Dbxref=GenBank:WP_003900747.1;Name=WP_003900747.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL42_RS28215;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_003900747.1;transl_table=11 NZ_KK316785.1 RefSeq gene 261972 262487 . - . ID=gene-AL42_RS28220;Name=AL42_RS28220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS28220;old_locus_tag=AL42_03888 NZ_KK316785.1 GeneMarkS-2+ CDS 261972 262487 . - 0 ID=cds-WP_369810406.1;Parent=gene-AL42_RS28220;Dbxref=GenBank:WP_369810406.1;Name=WP_369810406.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL42_RS28220;product=hypothetical protein;protein_id=WP_369810406.1;transl_table=11 NZ_KK316785.1 RefSeq gene 262513 264495 . - . ID=gene-AL42_RS24465;Name=ctpJ;gbkey=Gene;gene=ctpJ;gene_biotype=protein_coding;locus_tag=AL42_RS24465;old_locus_tag=AL42_03889 NZ_KK316785.1 Protein Homology CDS 262513 264495 . - 0 ID=cds-WP_003899665.1;Parent=gene-AL42_RS24465;Dbxref=GenBank:WP_003899665.1;Name=WP_003899665.1;Ontology_term=GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0046872;gbkey=CDS;gene=ctpJ;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218260.1;locus_tag=AL42_RS24465;product=heavy metal translocating P-type ATPase;protein_id=WP_003899665.1;transl_table=11 NZ_KK316785.1 RefSeq gene 264562 264924 . + . ID=gene-AL42_RS24470;Name=nmtR;gbkey=Gene;gene=nmtR;gene_biotype=protein_coding;locus_tag=AL42_RS24470;old_locus_tag=AL42_03890 NZ_KK316785.1 Protein Homology CDS 264562 264924 . + 0 ID=cds-WP_003901716.1;Parent=gene-AL42_RS24470;Dbxref=GenBank:WP_003901716.1;Name=WP_003901716.1;gbkey=CDS;gene=nmtR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218261.1;locus_tag=AL42_RS24470;product=Ni(II)/Co(II)-sensing metalloregulatory transcriptional repressor NmtR;protein_id=WP_003901716.1;transl_table=11 NZ_KK316785.1 RefSeq pseudogene 265029 265220 . - . ID=gene-AL42_RS24475;Name=AL42_RS24475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS24475;old_locus_tag=AL42_03891;partial=true;pseudo=true;start_range=.,265029 NZ_KK316785.1 Protein Homology CDS 265029 265220 . - 0 ID=cds-AL42_RS24475;Parent=gene-AL42_RS24475;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019930003.1;locus_tag=AL42_RS24475;partial=true;product=DUF2237 family protein;pseudo=true;start_range=.,265029;transl_table=11 NZ_KK316785.1 RefSeq gene 265293 265628 . - . ID=gene-AL42_RS24480;Name=AL42_RS24480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24480;old_locus_tag=AL42_03892 NZ_KK316785.1 Protein Homology CDS 265293 265628 . - 0 ID=cds-WP_003899670.1;Parent=gene-AL42_RS24480;Dbxref=GenBank:WP_003899670.1;Name=WP_003899670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178011.1;locus_tag=AL42_RS24480;product=PE domain-containing protein;protein_id=WP_003899670.1;transl_table=11 NZ_KK316785.1 RefSeq gene 265846 266229 . + . ID=gene-AL42_RS24485;Name=AL42_RS24485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24485;old_locus_tag=AL42_03893 NZ_KK316785.1 Protein Homology CDS 265846 266229 . + 0 ID=cds-WP_003899671.1;Parent=gene-AL42_RS24485;Dbxref=GenBank:WP_003899671.1;Name=WP_003899671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218264.1;locus_tag=AL42_RS24485;product=hypothetical protein;protein_id=WP_003899671.1;transl_table=11 NZ_KK316785.1 RefSeq gene 266359 266718 . + . ID=gene-AL42_RS24490;Name=AL42_RS24490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24490;old_locus_tag=AL42_03894 NZ_KK316785.1 Protein Homology CDS 266359 266718 . + 0 ID=cds-WP_003899672.1;Parent=gene-AL42_RS24490;Dbxref=GenBank:WP_003899672.1;Name=WP_003899672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218265.1;locus_tag=AL42_RS24490;product=hypothetical protein;protein_id=WP_003899672.1;transl_table=11 NZ_KK316785.1 RefSeq gene 266751 267101 . - . ID=gene-AL42_RS0105710;Name=AL42_RS0105710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0105710;old_locus_tag=AL42_03895 NZ_KK316785.1 GeneMarkS-2+ CDS 266751 267101 . - 0 ID=cds-WP_003917953.1;Parent=gene-AL42_RS0105710;Dbxref=GenBank:WP_003917953.1;Name=WP_003917953.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL42_RS0105710;product=VapC50 family PIN domain-containing toxin;protein_id=WP_003917953.1;transl_table=11 NZ_KK316785.1 RefSeq gene 267328 267774 . - . ID=gene-AL42_RS24495;Name=AL42_RS24495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24495;old_locus_tag=AL42_03897 NZ_KK316785.1 Protein Homology CDS 267328 267774 . - 0 ID=cds-WP_016719233.1;Parent=gene-AL42_RS24495;Dbxref=GenBank:WP_016719233.1;Name=WP_016719233.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016719233.1;locus_tag=AL42_RS24495;product=helix-turn-helix domain-containing protein;protein_id=WP_016719233.1;transl_table=11 NZ_KK316785.1 RefSeq gene 267996 268211 . + . ID=gene-AL42_RS24500;Name=AL42_RS24500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24500;old_locus_tag=AL42_03898 NZ_KK316785.1 Protein Homology CDS 267996 268211 . + 0 ID=cds-WP_003899674.1;Parent=gene-AL42_RS24500;Dbxref=GenBank:WP_003899674.1;Name=WP_003899674.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015294640.1;locus_tag=AL42_RS24500;product=tyrosine-type recombinase/integrase;protein_id=WP_003899674.1;transl_table=11 NZ_KK316785.1 RefSeq gene 268250 268339 . - . ID=gene-AL42_RS24505;Name=AL42_RS24505;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL42_RS24505;old_locus_tag=AL42_03899 NZ_KK316785.1 tRNAscan-SE tRNA 268250 268339 . - . ID=rna-AL42_RS24505;Parent=gene-AL42_RS24505;anticodon=(pos:complement(268303..268305));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS24505;product=tRNA-Ser NZ_KK316785.1 tRNAscan-SE exon 268250 268339 . - . ID=exon-AL42_RS24505-1;Parent=rna-AL42_RS24505;anticodon=(pos:complement(268303..268305));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS24505;product=tRNA-Ser NZ_KK316785.1 RefSeq gene 268369 268827 . - . ID=gene-AL42_RS24510;Name=AL42_RS24510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24510;old_locus_tag=AL42_03900 NZ_KK316785.1 Protein Homology CDS 268369 268827 . - 0 ID=cds-WP_003420508.1;Parent=gene-AL42_RS24510;Dbxref=GenBank:WP_003420508.1;Name=WP_003420508.1;Ontology_term=GO:0009116,GO:0008270,GO:0019239;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,deaminase activity|0019239||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218269.1;locus_tag=AL42_RS24510;product=nucleoside deaminase;protein_id=WP_003420508.1;transl_table=11 NZ_KK316785.1 RefSeq gene 268843 269364 . - . ID=gene-AL42_RS24515;Name=AL42_RS24515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24515;old_locus_tag=AL42_03901 NZ_KK316785.1 Protein Homology CDS 268843 269364 . - 0 ID=cds-WP_003899676.1;Parent=gene-AL42_RS24515;Dbxref=GenBank:WP_003899676.1;Name=WP_003899676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899676.1;locus_tag=AL42_RS24515;product=tRNA adenosine deaminase-associated protein;protein_id=WP_003899676.1;transl_table=11 NZ_KK316785.1 RefSeq gene 269504 270448 . + . ID=gene-AL42_RS24520;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=AL42_RS24520;old_locus_tag=AL42_03902 NZ_KK316785.1 Protein Homology CDS 269504 270448 . + 0 ID=cds-WP_003912273.1;Parent=gene-AL42_RS24520;Dbxref=GenBank:WP_003912273.1;Name=WP_003912273.1;Ontology_term=GO:0006571,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017351229.1;locus_tag=AL42_RS24520;product=prephenate dehydrogenase;protein_id=WP_003912273.1;transl_table=11 NZ_KK316785.1 RefSeq gene 270411 271010 . - . ID=gene-AL42_RS24525;Name=AL42_RS24525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24525;old_locus_tag=AL42_03903 NZ_KK316785.1 Protein Homology CDS 270411 271010 . - 0 ID=cds-WP_003420517.1;Parent=gene-AL42_RS24525;Dbxref=GenBank:WP_003420517.1;Name=WP_003420517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218272.1;locus_tag=AL42_RS24525;product=putative glycolipid-binding domain-containing protein;protein_id=WP_003420517.1;transl_table=11 NZ_KK316785.1 RefSeq gene 271016 271735 . - . ID=gene-AL42_RS24530;Name=proZ;gbkey=Gene;gene=proZ;gene_biotype=protein_coding;locus_tag=AL42_RS24530;old_locus_tag=AL42_03904 NZ_KK316785.1 Protein Homology CDS 271016 271735 . - 0 ID=cds-WP_003420520.1;Parent=gene-AL42_RS24530;Dbxref=GenBank:WP_003420520.1;Name=WP_003420520.1;gbkey=CDS;gene=proZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218273.1;locus_tag=AL42_RS24530;product=glycine betaine/carnitine/choline/L-proline ABC transporter permease ProZ;protein_id=WP_003420520.1;transl_table=11 NZ_KK316785.1 RefSeq gene 271732 272421 . - . ID=gene-AL42_RS24535;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=AL42_RS24535;old_locus_tag=AL42_03905 NZ_KK316785.1 Protein Homology CDS 271732 272421 . - 0 ID=cds-WP_003420526.1;Parent=gene-AL42_RS24535;Dbxref=GenBank:WP_003420526.1;Name=WP_003420526.1;gbkey=CDS;gene=proW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218274.1;locus_tag=AL42_RS24535;product=glycine betaine/carnitine/choline/L-proline ABC transporter permease ProW;protein_id=WP_003420526.1;transl_table=11 NZ_KK316785.1 RefSeq gene 272409 273539 . - . ID=gene-AL42_RS24540;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=AL42_RS24540;old_locus_tag=AL42_03906 NZ_KK316785.1 Protein Homology CDS 272409 273539 . - 0 ID=cds-WP_003906205.1;Parent=gene-AL42_RS24540;Dbxref=GenBank:WP_003906205.1;Name=WP_003906205.1;gbkey=CDS;gene=proV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218275.1;locus_tag=AL42_RS24540;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=WP_003906205.1;transl_table=11 NZ_KK316785.1 RefSeq gene 273548 274495 . - . ID=gene-AL42_RS24545;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=AL42_RS24545;old_locus_tag=AL42_03907 NZ_KK316785.1 Protein Homology CDS 273548 274495 . - 0 ID=cds-WP_003901718.1;Parent=gene-AL42_RS24545;Dbxref=GenBank:WP_003901718.1;Name=WP_003901718.1;gbkey=CDS;gene=proX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218276.1;locus_tag=AL42_RS24545;product=glycine betaine/carnitine/choline/L-proline ABC transporter substrate-binding protein ProX;protein_id=WP_003901718.1;transl_table=11 NZ_KK316785.1 RefSeq gene 274609 274962 . + . ID=gene-AL42_RS24550;Name=AL42_RS24550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24550;old_locus_tag=AL42_03908 NZ_KK316785.1 Protein Homology CDS 274609 274962 . + 0 ID=cds-WP_003899680.1;Parent=gene-AL42_RS24550;Dbxref=GenBank:WP_003899680.1;Name=WP_003899680.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899680.1;locus_tag=AL42_RS24550;product=LapA family protein;protein_id=WP_003899680.1;transl_table=11 NZ_KK316785.1 RefSeq gene 274984 276039 . - . ID=gene-AL42_RS24555;Name=AL42_RS24555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24555;old_locus_tag=AL42_03909 NZ_KK316785.1 Protein Homology CDS 274984 276039 . - 0 ID=cds-WP_003420539.1;Parent=gene-AL42_RS24555;Dbxref=GenBank:WP_003420539.1;Name=WP_003420539.1;Ontology_term=GO:0016310,GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218278.1;locus_tag=AL42_RS24555;product=phosphotransferase family protein;protein_id=WP_003420539.1;transl_table=11 NZ_KK316785.1 RefSeq gene 276118 277998 . - . ID=gene-AL42_RS24560;Name=AL42_RS24560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24560;old_locus_tag=AL42_03910 NZ_KK316785.1 Protein Homology CDS 276118 277998 . - 0 ID=cds-WP_003900750.1;Parent=gene-AL42_RS24560;Dbxref=GenBank:WP_003900750.1;Name=WP_003900750.1;Ontology_term=GO:0008484,GO:0046872,GO:0046983;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218279.1;locus_tag=AL42_RS24560;product=alkyl/aryl-sulfatase;protein_id=WP_003900750.1;transl_table=11 NZ_KK316785.1 RefSeq gene 278169 278648 . + . ID=gene-AL42_RS24565;Name=lpqH;gbkey=Gene;gene=lpqH;gene_biotype=protein_coding;locus_tag=AL42_RS24565;old_locus_tag=AL42_03911 NZ_KK316785.1 Protein Homology CDS 278169 278648 . + 0 ID=cds-WP_003420544.1;Parent=gene-AL42_RS24565;Dbxref=GenBank:WP_003420544.1;Name=WP_003420544.1;gbkey=CDS;gene=lpqH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218280.1;locus_tag=AL42_RS24565;product=lipoprotein LpqH;protein_id=WP_003420544.1;transl_table=11 NZ_KK316785.1 RefSeq gene 278704 280224 . - . ID=gene-AL42_RS24570;Name=tcrY;gbkey=Gene;gene=tcrY;gene_biotype=protein_coding;locus_tag=AL42_RS24570;old_locus_tag=AL42_03912 NZ_KK316785.1 Protein Homology CDS 278704 280224 . - 0 ID=cds-WP_003899682.1;Parent=gene-AL42_RS24570;Dbxref=GenBank:WP_003899682.1;Name=WP_003899682.1;gbkey=CDS;gene=tcrY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899682.1;locus_tag=AL42_RS24570;product=two-component system sensor histidine kinase TcrY;protein_id=WP_003899682.1;transl_table=11 NZ_KK316785.1 RefSeq gene 280202 280906 . - . ID=gene-AL42_RS24575;Name=tcrX;gbkey=Gene;gene=tcrX;gene_biotype=protein_coding;locus_tag=AL42_RS24575;old_locus_tag=AL42_03913 NZ_KK316785.1 Protein Homology CDS 280202 280906 . - 0 ID=cds-WP_003420552.1;Parent=gene-AL42_RS24575;Dbxref=GenBank:WP_003420552.1;Name=WP_003420552.1;gbkey=CDS;gene=tcrX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218282.1;locus_tag=AL42_RS24575;product=two-component system response regulator TcrX;protein_id=WP_003420552.1;transl_table=11 NZ_KK316785.1 RefSeq gene 281280 282101 . + . ID=gene-AL42_RS24580;Name=AL42_RS24580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24580;old_locus_tag=AL42_03914 NZ_KK316785.1 Protein Homology CDS 281280 282101 . + 0 ID=cds-WP_003917955.1;Parent=gene-AL42_RS24580;Dbxref=GenBank:WP_003917955.1;Name=WP_003917955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912342.1;locus_tag=AL42_RS24580;product=glycoside hydrolase family 25 domain-containing protein;protein_id=WP_003917955.1;transl_table=11 NZ_KK316785.1 RefSeq gene 282115 283059 . - . ID=gene-AL42_RS24585;Name=AL42_RS24585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24585;old_locus_tag=AL42_03915 NZ_KK316785.1 Protein Homology CDS 282115 283059 . - 0 ID=cds-WP_003420557.1;Parent=gene-AL42_RS24585;Dbxref=GenBank:WP_003420557.1;Name=WP_003420557.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218284.1;locus_tag=AL42_RS24585;product=class I SAM-dependent methyltransferase;protein_id=WP_003420557.1;transl_table=11 NZ_KK316785.1 RefSeq gene 283189 283548 . + . ID=gene-AL42_RS24590;Name=AL42_RS24590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24590;old_locus_tag=AL42_03916 NZ_KK316785.1 Protein Homology CDS 283189 283548 . + 0 ID=cds-WP_003420560.1;Parent=gene-AL42_RS24590;Dbxref=GenBank:WP_003420560.1;Name=WP_003420560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218285.1;locus_tag=AL42_RS24590;product=nuclear transport factor 2 family protein;protein_id=WP_003420560.1;transl_table=11 NZ_KK316785.1 RefSeq gene 283734 284006 . + . ID=gene-AL42_RS24595;Name=AL42_RS24595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24595;old_locus_tag=AL42_03917 NZ_KK316785.1 Protein Homology CDS 283734 284006 . + 0 ID=cds-WP_003420563.1;Parent=gene-AL42_RS24595;Dbxref=GenBank:WP_003420563.1;Name=WP_003420563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218286.1;locus_tag=AL42_RS24595;product=hypothetical protein;protein_id=WP_003420563.1;transl_table=11 NZ_KK316785.1 RefSeq gene 284319 284894 . - . ID=gene-AL42_RS24600;Name=AL42_RS24600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24600;old_locus_tag=AL42_03918 NZ_KK316785.1 Protein Homology CDS 284319 284894 . - 0 ID=cds-WP_003420565.1;Parent=gene-AL42_RS24600;Dbxref=GenBank:WP_003420565.1;Name=WP_003420565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218287.1;locus_tag=AL42_RS24600;product=hypothetical protein;protein_id=WP_003420565.1;transl_table=11 NZ_KK316785.1 RefSeq pseudogene 285039 285414 . - . ID=gene-AL42_RS26655;Name=AL42_RS26655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS26655;partial=true;pseudo=true;start_range=.,285039 NZ_KK316785.1 Protein Homology CDS 285039 285414 . - 0 ID=cds-AL42_RS26655;Parent=gene-AL42_RS26655;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217328.1;locus_tag=AL42_RS26655;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,285039;transl_table=11 NZ_KK316785.1 RefSeq gene 285523 285849 . - . ID=gene-AL42_RS24615;Name=AL42_RS24615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24615;old_locus_tag=AL42_03921 NZ_KK316785.1 Protein Homology CDS 285523 285849 . - 0 ID=cds-WP_003420573.1;Parent=gene-AL42_RS24615;Dbxref=GenBank:WP_003420573.1;Name=WP_003420573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218288.1;locus_tag=AL42_RS24615;product=hypothetical protein;protein_id=WP_003420573.1;transl_table=11 NZ_KK316785.1 RefSeq gene 285984 286056 . - . ID=gene-AL42_RS24620;Name=AL42_RS24620;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL42_RS24620;old_locus_tag=AL42_03922 NZ_KK316785.1 tRNAscan-SE tRNA 285984 286056 . - . ID=rna-AL42_RS24620;Parent=gene-AL42_RS24620;anticodon=(pos:complement(286021..286023));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS24620;product=tRNA-Arg NZ_KK316785.1 tRNAscan-SE exon 285984 286056 . - . ID=exon-AL42_RS24620-1;Parent=rna-AL42_RS24620;anticodon=(pos:complement(286021..286023));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS24620;product=tRNA-Arg NZ_KK316785.1 RefSeq gene 286087 286175 . - . ID=gene-AL42_RS24625;Name=AL42_RS24625;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL42_RS24625;old_locus_tag=AL42_03923 NZ_KK316785.1 tRNAscan-SE tRNA 286087 286175 . - . ID=rna-AL42_RS24625;Parent=gene-AL42_RS24625;anticodon=(pos:complement(286139..286141));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS24625;product=tRNA-Ser NZ_KK316785.1 tRNAscan-SE exon 286087 286175 . - . ID=exon-AL42_RS24625-1;Parent=rna-AL42_RS24625;anticodon=(pos:complement(286139..286141));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS24625;product=tRNA-Ser NZ_KK316785.1 RefSeq gene 286253 287314 . + . ID=gene-AL42_RS24630;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=AL42_RS24630;old_locus_tag=AL42_03924 NZ_KK316785.1 Protein Homology CDS 286253 287314 . + 0 ID=cds-WP_003420576.1;Parent=gene-AL42_RS24630;Dbxref=GenBank:WP_003420576.1;Name=WP_003420576.1;gbkey=CDS;gene=hisC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218289.1;locus_tag=AL42_RS24630;product=histidinol-phosphate transaminase;protein_id=WP_003420576.1;transl_table=11 NZ_KK316785.1 RefSeq gene 287360 287944 . - . ID=gene-AL42_RS24635;Name=AL42_RS24635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24635;old_locus_tag=AL42_03925 NZ_KK316785.1 Protein Homology CDS 287360 287944 . - 0 ID=cds-WP_003906211.1;Parent=gene-AL42_RS24635;Dbxref=GenBank:WP_003906211.1;Name=WP_003906211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218290.1;locus_tag=AL42_RS24635;product=TIGR03086 family metal-binding protein;protein_id=WP_003906211.1;transl_table=11 NZ_KK316785.1 RefSeq gene 287968 288792 . + . ID=gene-AL42_RS24640;Name=AL42_RS24640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24640;old_locus_tag=AL42_03926 NZ_KK316785.1 Protein Homology CDS 287968 288792 . + 0 ID=cds-WP_003420587.1;Parent=gene-AL42_RS24640;Dbxref=GenBank:WP_003420587.1;Name=WP_003420587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218291.1;locus_tag=AL42_RS24640;product=crotonase/enoyl-CoA hydratase family protein;protein_id=WP_003420587.1;transl_table=11 NZ_KK316785.1 RefSeq gene 288804 290051 . + . ID=gene-AL42_RS24645;Name=lipE;gbkey=Gene;gene=lipE;gene_biotype=protein_coding;locus_tag=AL42_RS24645;old_locus_tag=AL42_03927 NZ_KK316785.1 Protein Homology CDS 288804 290051 . + 0 ID=cds-WP_031721850.1;Parent=gene-AL42_RS24645;Dbxref=GenBank:WP_031721850.1;Name=WP_031721850.1;gbkey=CDS;gene=lipE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218292.1;locus_tag=AL42_RS24645;product=lipase LipE;protein_id=WP_031721850.1;transl_table=11 NZ_KK316785.1 RefSeq pseudogene 290207 291211 . + . ID=gene-AL42_RS26660;Name=AL42_RS26660;end_range=291211,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS26660;old_locus_tag=AL42_03928;partial=true;pseudo=true NZ_KK316785.1 Protein Homology CDS 290207 291211 . + 0 ID=cds-AL42_RS26660;Parent=gene-AL42_RS26660;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=291211,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014741.6;locus_tag=AL42_RS26660;partial=true;product=DUF222 domain-containing protein;pseudo=true;transl_table=11 NZ_KK316785.1 RefSeq gene 291699 291785 . - . ID=gene-AL42_RS24650;Name=AL42_RS24650;gbkey=Gene;gene_biotype=tRNA;locus_tag=AL42_RS24650;old_locus_tag=AL42_03929 NZ_KK316785.1 tRNAscan-SE tRNA 291699 291785 . - . ID=rna-AL42_RS24650;Parent=gene-AL42_RS24650;anticodon=(pos:complement(291749..291751));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS24650;product=tRNA-Ser NZ_KK316785.1 tRNAscan-SE exon 291699 291785 . - . ID=exon-AL42_RS24650-1;Parent=rna-AL42_RS24650;anticodon=(pos:complement(291749..291751));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AL42_RS24650;product=tRNA-Ser NZ_KK316785.1 RefSeq gene 291821 292798 . + . ID=gene-AL42_RS24655;Name=AL42_RS24655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24655;old_locus_tag=AL42_03930 NZ_KK316785.1 Protein Homology CDS 291821 292798 . + 0 ID=cds-WP_003917958.1;Parent=gene-AL42_RS24655;Dbxref=GenBank:WP_003917958.1;Name=WP_003917958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917958.1;locus_tag=AL42_RS24655;product=NAD(P)H-quinone oxidoreductase;protein_id=WP_003917958.1;transl_table=11 NZ_KK316785.1 RefSeq gene 292817 294013 . - . ID=gene-AL42_RS24660;Name=AL42_RS24660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24660;old_locus_tag=AL42_03931 NZ_KK316785.1 Protein Homology CDS 292817 294013 . - 0 ID=cds-WP_003420595.1;Parent=gene-AL42_RS24660;Dbxref=GenBank:WP_003420595.1;Name=WP_003420595.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218295.1;locus_tag=AL42_RS24660;product=cysteine desulfurase-like protein;protein_id=WP_003420595.1;transl_table=11 NZ_KK316785.1 RefSeq gene 294103 296103 . + . ID=gene-AL42_RS24665;Name=AL42_RS24665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24665;old_locus_tag=AL42_03932 NZ_KK316785.1 Protein Homology CDS 294103 296103 . + 0 ID=cds-WP_003420597.1;Parent=gene-AL42_RS24665;Dbxref=GenBank:WP_003420597.1;Name=WP_003420597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218296.1;locus_tag=AL42_RS24665;product=DUF6541 family protein;protein_id=WP_003420597.1;transl_table=11 NZ_KK316785.1 RefSeq gene 296107 296643 . + . ID=gene-AL42_RS24670;Name=bpa;gbkey=Gene;gene=bpa;gene_biotype=protein_coding;locus_tag=AL42_RS24670;old_locus_tag=AL42_03933 NZ_KK316785.1 Protein Homology CDS 296107 296643 . + 0 ID=cds-WP_003899690.1;Parent=gene-AL42_RS24670;Dbxref=GenBank:WP_003899690.1;Name=WP_003899690.1;gbkey=CDS;gene=bpa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218297.1;locus_tag=AL42_RS24670;product=proteasome activator protein Bpa;protein_id=WP_003899690.1;transl_table=11 NZ_KK316785.1 RefSeq gene 296647 297468 . + . ID=gene-AL42_RS24675;Name=wzt;gbkey=Gene;gene=wzt;gene_biotype=protein_coding;gene_synonym=rfbE;locus_tag=AL42_RS24675;old_locus_tag=AL42_03934 NZ_KK316785.1 Protein Homology CDS 296647 297468 . + 0 ID=cds-WP_003420603.1;Parent=gene-AL42_RS24675;Dbxref=GenBank:WP_003420603.1;Name=WP_003420603.1;gbkey=CDS;gene=wzt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218298.1;locus_tag=AL42_RS24675;product=galactan export ABC transporter ATP-binding subunit Wzt/RfbE;protein_id=WP_003420603.1;transl_table=11 NZ_KK316785.1 RefSeq gene 297465 298379 . + . ID=gene-AL42_RS24680;Name=glfT1;gbkey=Gene;gene=glfT1;gene_biotype=protein_coding;locus_tag=AL42_RS24680;old_locus_tag=AL42_03935 NZ_KK316785.1 Protein Homology CDS 297465 298379 . + 0 ID=cds-WP_003906213.1;Parent=gene-AL42_RS24680;Dbxref=GenBank:WP_003906213.1;Name=WP_003906213.1;gbkey=CDS;gene=glfT1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178014.1;locus_tag=AL42_RS24680;product=galactofuranosyltransferase GlfT1;protein_id=WP_003906213.1;transl_table=11 NZ_KK316785.1 RefSeq gene 298376 299218 . + . ID=gene-AL42_RS24685;Name=wzm;gbkey=Gene;gene=wzm;gene_biotype=protein_coding;gene_synonym=rfbD;locus_tag=AL42_RS24685;old_locus_tag=AL42_03936 NZ_KK316785.1 Protein Homology CDS 298376 299218 . + 0 ID=cds-WP_003420610.1;Parent=gene-AL42_RS24685;Dbxref=GenBank:WP_003420610.1;Name=WP_003420610.1;gbkey=CDS;gene=wzm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218300.1;locus_tag=AL42_RS24685;product=galactan export ABC transporter permease subunit Wzm/RfbD;protein_id=WP_003420610.1;transl_table=11 NZ_KK316785.1 RefSeq gene 299374 300354 . + . ID=gene-AL42_RS24690;Name=AL42_RS24690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24690;old_locus_tag=AL42_03937 NZ_KK316785.1 Protein Homology CDS 299374 300354 . + 0 ID=cds-WP_003420612.1;Parent=gene-AL42_RS24690;Dbxref=GenBank:WP_003420612.1;Name=WP_003420612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178015.1;locus_tag=AL42_RS24690;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_003420612.1;transl_table=11 NZ_KK316785.1 RefSeq pseudogene 300438 301422 . + . ID=gene-AL42_RS27055;Name=AL42_RS27055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS27055;pseudo=true NZ_KK316785.1 Protein Homology CDS 300438 301422 . + 0 ID=cds-AL42_RS27055;Parent=gene-AL42_RS27055;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218302.1;locus_tag=AL42_RS27055;product=hypothetical protein;pseudo=true;transl_table=11 NZ_KK316785.1 RefSeq gene 301403 302626 . - . ID=gene-AL42_RS24700;Name=AL42_RS24700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24700;old_locus_tag=AL42_03939 NZ_KK316785.1 Protein Homology CDS 301403 302626 . - 0 ID=cds-WP_003420618.1;Parent=gene-AL42_RS24700;Dbxref=GenBank:WP_003420618.1;Name=WP_003420618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218303.1;locus_tag=AL42_RS24700;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_003420618.1;transl_table=11 NZ_KK316785.1 RefSeq gene 302639 303565 . - . ID=gene-AL42_RS24705;Name=AL42_RS24705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24705;old_locus_tag=AL42_03940 NZ_KK316785.1 Protein Homology CDS 302639 303565 . - 0 ID=cds-WP_003420620.1;Parent=gene-AL42_RS24705;Dbxref=GenBank:WP_003420620.1;Name=WP_003420620.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218304.1;locus_tag=AL42_RS24705;product=SAM-dependent methyltransferase;protein_id=WP_003420620.1;transl_table=11 NZ_KK316785.1 RefSeq gene 303809 304294 . + . ID=gene-AL42_RS24710;Name=AL42_RS24710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24710;old_locus_tag=AL42_03941 NZ_KK316785.1 Protein Homology CDS 303809 304294 . + 0 ID=cds-WP_003911036.1;Parent=gene-AL42_RS24710;Dbxref=GenBank:WP_003911036.1;Name=WP_003911036.1;Ontology_term=GO:0032784,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218305.1;locus_tag=AL42_RS24710;product=GreA/GreB family elongation factor;protein_id=WP_003911036.1;transl_table=11 NZ_KK316785.1 RefSeq gene 304403 304768 . + . ID=gene-AL42_RS24715;Name=AL42_RS24715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24715;old_locus_tag=AL42_03942 NZ_KK316785.1 Protein Homology CDS 304403 304768 . + 0 ID=cds-WP_003420627.1;Parent=gene-AL42_RS24715;Dbxref=GenBank:WP_003420627.1;Name=WP_003420627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218306.1;locus_tag=AL42_RS24715;product=arabinogalactan biosynthesis protein;protein_id=WP_003420627.1;transl_table=11 NZ_KK316785.1 RefSeq gene 304808 306193 . + . ID=gene-AL42_RS24720;Name=dprE1;gbkey=Gene;gene=dprE1;gene_biotype=protein_coding;locus_tag=AL42_RS24720;old_locus_tag=AL42_03943 NZ_KK316785.1 Protein Homology CDS 304808 306193 . + 0 ID=cds-WP_003420630.1;Parent=gene-AL42_RS24720;Dbxref=GenBank:WP_003420630.1;Name=WP_003420630.1;gbkey=CDS;gene=dprE1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218307.1;locus_tag=AL42_RS24720;product=decaprenylphospho-beta-D-ribofuranose 2-dehydrogenase DprE1;protein_id=WP_003420630.1;transl_table=11 NZ_KK316785.1 RefSeq gene 306194 306958 . + . ID=gene-AL42_RS24725;Name=AL42_RS24725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24725;old_locus_tag=AL42_03944 NZ_KK316785.1 Protein Homology CDS 306194 306958 . + 0 ID=cds-WP_003420632.1;Parent=gene-AL42_RS24725;Dbxref=GenBank:WP_003420632.1;Name=WP_003420632.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003420632.1;locus_tag=AL42_RS24725;product=decaprenylphospho-beta-D-erythro-pentofuranosid-2-ulose 2-reductase;protein_id=WP_003420632.1;transl_table=11 NZ_KK316785.1 RefSeq gene 306961 308892 . + . ID=gene-AL42_RS24730;Name=aftA;gbkey=Gene;gene=aftA;gene_biotype=protein_coding;locus_tag=AL42_RS24730;old_locus_tag=AL42_03945 NZ_KK316785.1 Protein Homology CDS 306961 308892 . + 0 ID=cds-WP_003899694.1;Parent=gene-AL42_RS24730;Dbxref=GenBank:WP_003899694.1;Name=WP_003899694.1;gbkey=CDS;gene=aftA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218309.1;locus_tag=AL42_RS24730;product=galactan 5-O-arabinofuranosyltransferase;protein_id=WP_003899694.1;transl_table=11 NZ_KK316785.1 RefSeq gene 308892 312176 . + . ID=gene-AL42_RS24735;Name=embC;gbkey=Gene;gene=embC;gene_biotype=protein_coding;locus_tag=AL42_RS24735;old_locus_tag=AL42_03946 NZ_KK316785.1 Protein Homology CDS 308892 312176 . + 0 ID=cds-WP_003901726.1;Parent=gene-AL42_RS24735;Dbxref=GenBank:WP_003901726.1;Name=WP_003901726.1;gbkey=CDS;gene=embC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218310.1;locus_tag=AL42_RS24735;product=arabinosyltransferase EmbC;protein_id=WP_003901726.1;transl_table=11 NZ_KK316785.1 RefSeq gene 312262 315546 . + . ID=gene-AL42_RS24740;Name=embA;gbkey=Gene;gene=embA;gene_biotype=protein_coding;locus_tag=AL42_RS24740;old_locus_tag=AL42_03947 NZ_KK316785.1 Protein Homology CDS 312262 315546 . + 0 ID=cds-WP_003899696.1;Parent=gene-AL42_RS24740;Dbxref=GenBank:WP_003899696.1;Name=WP_003899696.1;gbkey=CDS;gene=embA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218311.1;locus_tag=AL42_RS24740;product=arabinosyltransferase EmbA;protein_id=WP_003899696.1;transl_table=11 NZ_KK316785.1 RefSeq gene 315543 318839 . + . ID=gene-AL42_RS24745;Name=embB;gbkey=Gene;gene=embB;gene_biotype=protein_coding;locus_tag=AL42_RS24745;old_locus_tag=AL42_03948 NZ_KK316785.1 Protein Homology CDS 315543 318839 . + 0 ID=cds-WP_003901728.1;Parent=gene-AL42_RS24745;Dbxref=GenBank:WP_003901728.1;Name=WP_003901728.1;gbkey=CDS;gene=embB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218312.1;locus_tag=AL42_RS24745;product=arabinosyltransferase EmbB;protein_id=WP_003901728.1;transl_table=11 NZ_KK316785.1 RefSeq gene 318907 320034 . + . ID=gene-AL42_RS24750;Name=AL42_RS24750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24750;old_locus_tag=AL42_03949 NZ_KK316785.1 Protein Homology CDS 318907 320034 . + 0 ID=cds-WP_003420646.1;Parent=gene-AL42_RS24750;Dbxref=GenBank:WP_003420646.1;Name=WP_003420646.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178016.1;locus_tag=AL42_RS24750;product=MBL fold metallo-hydrolase;protein_id=WP_003420646.1;transl_table=11 NZ_KK316785.1 RefSeq gene 320114 321895 . + . ID=gene-AL42_RS24755;Name=AL42_RS24755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24755;old_locus_tag=AL42_03950 NZ_KK316785.1 Protein Homology CDS 320114 321895 . + 0 ID=cds-WP_003902556.1;Parent=gene-AL42_RS24755;Dbxref=GenBank:WP_003902556.1;Name=WP_003902556.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218314.1;locus_tag=AL42_RS24755;product=acyl-CoA dehydrogenase family protein;protein_id=WP_003902556.1;transl_table=11 NZ_KK316785.1 RefSeq gene 322022 323356 . + . ID=gene-AL42_RS24760;Name=AL42_RS24760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24760;old_locus_tag=AL42_03951 NZ_KK316785.1 Protein Homology CDS 322022 323356 . + 0 ID=cds-WP_003900311.1-2;Parent=gene-AL42_RS24760;Dbxref=GenBank:WP_003900311.1;Name=WP_003900311.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_215829.1;locus_tag=AL42_RS24760;product=ISL3-like element IS1557 family transposase;protein_id=WP_003900311.1;transl_table=11 NZ_KK316785.1 RefSeq gene 323409 324977 . - . ID=gene-AL42_RS24765;Name=AL42_RS24765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24765;old_locus_tag=AL42_03952 NZ_KK316785.1 Protein Homology CDS 323409 324977 . - 0 ID=cds-WP_003420767.1;Parent=gene-AL42_RS24765;Dbxref=GenBank:WP_003420767.1;Name=WP_003420767.1;Ontology_term=GO:0006633,GO:0003989,GO:0016874,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,ligase activity|0016874||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218316.2;locus_tag=AL42_RS24765;product=acyl-CoA carboxylase subunit beta;protein_id=WP_003420767.1;transl_table=11 NZ_KK316785.1 RefSeq gene 324974 330175 . - . ID=gene-AL42_RS24770;Name=pks13;gbkey=Gene;gene=pks13;gene_biotype=protein_coding;locus_tag=AL42_RS24770;old_locus_tag=AL42_03953 NZ_KK316785.1 Protein Homology CDS 324974 330175 . - 0 ID=cds-WP_003906218.1;Parent=gene-AL42_RS24770;Dbxref=GenBank:WP_003906218.1;Name=WP_003906218.1;gbkey=CDS;gene=pks13;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218317.1;locus_tag=AL42_RS24770;product=polyketide synthase Pks13;protein_id=WP_003906218.1;transl_table=11 NZ_KK316785.1 RefSeq gene 330182 332071 . - . ID=gene-AL42_RS24775;Name=fadD32;gbkey=Gene;gene=fadD32;gene_biotype=protein_coding;locus_tag=AL42_RS24775;old_locus_tag=AL42_03954 NZ_KK316785.1 Protein Homology CDS 330182 332071 . - 0 ID=cds-WP_003917965.1;Parent=gene-AL42_RS24775;Dbxref=GenBank:WP_003917965.1;Name=WP_003917965.1;gbkey=CDS;gene=fadD32;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912356.1;locus_tag=AL42_RS24775;product=long-chain-fatty-acid--AMP ligase FadD32;protein_id=WP_003917965.1;transl_table=11 NZ_KK316785.1 RefSeq gene 332384 333394 . - . ID=gene-AL42_RS24780;Name=AL42_RS24780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24780;old_locus_tag=AL42_03955 NZ_KK316785.1 Protein Homology CDS 332384 333394 . - 0 ID=cds-WP_003420779.1;Parent=gene-AL42_RS24780;Dbxref=GenBank:WP_003420779.1;Name=WP_003420779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218319.1;locus_tag=AL42_RS24780;product=phospholipase;protein_id=WP_003420779.1;transl_table=11 NZ_KK316785.1 RefSeq gene 333593 334492 . - . ID=gene-AL42_RS24785;Name=fbpD;gbkey=Gene;gene=fbpD;gene_biotype=protein_coding;locus_tag=AL42_RS24785;old_locus_tag=AL42_03956 NZ_KK316785.1 Protein Homology CDS 333593 334492 . - 0 ID=cds-WP_003420783.1;Parent=gene-AL42_RS24785;Dbxref=GenBank:WP_003420783.1;Name=WP_003420783.1;Ontology_term=GO:0016787;gbkey=CDS;gene=fbpD;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178017.1;locus_tag=AL42_RS24785;product=esterase family protein;protein_id=WP_003420783.1;transl_table=11 NZ_KK316785.1 RefSeq gene 334672 335688 . - . ID=gene-AL42_RS24790;Name=ag85A;gbkey=Gene;gene=ag85A;gene_biotype=protein_coding;gene_synonym=fbpA;locus_tag=AL42_RS24790;old_locus_tag=AL42_03957 NZ_KK316785.1 Protein Homology CDS 334672 335688 . - 0 ID=cds-WP_003900759.1;Parent=gene-AL42_RS24790;Dbxref=GenBank:WP_003900759.1;Name=WP_003900759.1;gbkey=CDS;gene=ag85A;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218321.1;locus_tag=AL42_RS24790;product=diacylglycerol acyltransferase/mycolyltransferase Ag85A;protein_id=WP_003900759.1;transl_table=11 NZ_KK316785.1 RefSeq gene 335983 337980 . - . ID=gene-AL42_RS24795;Name=aftB;gbkey=Gene;gene=aftB;gene_biotype=protein_coding;locus_tag=AL42_RS24795;old_locus_tag=AL42_03958 NZ_KK316785.1 Protein Homology CDS 335983 337980 . - 0 ID=cds-WP_031647638.1;Parent=gene-AL42_RS24795;Dbxref=GenBank:WP_031647638.1;Name=WP_031647638.1;gbkey=CDS;gene=aftB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009936680.1;locus_tag=AL42_RS24795;product=terminal beta-(1->2)-arabinofuranosyltransferase;protein_id=WP_031647638.1;transl_table=11 NZ_KK316785.1 RefSeq gene 337955 338863 . - . ID=gene-AL42_RS24800;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=AL42_RS24800;old_locus_tag=AL42_03959 NZ_KK316785.1 Protein Homology CDS 337955 338863 . - 0 ID=cds-WP_003899704.1;Parent=gene-AL42_RS24800;Dbxref=GenBank:WP_003899704.1;Name=WP_003899704.1;gbkey=CDS;gene=ubiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218323.1;locus_tag=AL42_RS24800;product=decaprenyl-phosphate phosphoribosyltransferase;protein_id=WP_003899704.1;transl_table=11 NZ_KK316785.1 RefSeq gene 338870 339403 . - . ID=gene-AL42_RS24805;Name=AL42_RS24805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24805;old_locus_tag=AL42_03960 NZ_KK316785.1 Protein Homology CDS 338870 339403 . - 0 ID=cds-WP_003899705.1;Parent=gene-AL42_RS24805;Dbxref=GenBank:WP_003899705.1;Name=WP_003899705.1;Ontology_term=GO:0008610,GO:0046839,GO:0042577;gbkey=CDS;go_function=lipid phosphatase activity|0042577||IEA;go_process=lipid biosynthetic process|0008610||IEA,phospholipid dephosphorylation|0046839||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899705.1;locus_tag=AL42_RS24805;product=phosphatase PAP2 family protein;protein_id=WP_003899705.1;transl_table=11 NZ_KK316785.1 RefSeq gene 339396 341309 . - . ID=gene-AL42_RS24810;Name=glfT2;gbkey=Gene;gene=glfT2;gene_biotype=protein_coding;locus_tag=AL42_RS24810;old_locus_tag=AL42_03961 NZ_KK316785.1 Protein Homology CDS 339396 341309 . - 0 ID=cds-WP_003900761.1;Parent=gene-AL42_RS24810;Dbxref=GenBank:WP_003900761.1;Name=WP_003900761.1;gbkey=CDS;gene=glfT2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218325.1;locus_tag=AL42_RS24810;product=galactofuranosyl transferase GlfT2;protein_id=WP_003900761.1;transl_table=11 NZ_KK316785.1 RefSeq gene 341306 342505 . - . ID=gene-AL42_RS24815;Name=glf;gbkey=Gene;gene=glf;gene_biotype=protein_coding;locus_tag=AL42_RS24815;old_locus_tag=AL42_03962 NZ_KK316785.1 Protein Homology CDS 341306 342505 . - 0 ID=cds-WP_003420798.1;Parent=gene-AL42_RS24815;Dbxref=GenBank:WP_003420798.1;Name=WP_003420798.1;Ontology_term=GO:0009273,GO:0008767;gbkey=CDS;gene=glf;go_function=UDP-galactopyranose mutase activity|0008767||IEA;go_process=peptidoglycan-based cell wall biogenesis|0009273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218326.1;locus_tag=AL42_RS24815;product=UDP-galactopyranose mutase;protein_id=WP_003420798.1;transl_table=11 NZ_KK316785.1 RefSeq gene 342769 343623 . + . ID=gene-AL42_RS24820;Name=pirG;gbkey=Gene;gene=pirG;gene_biotype=protein_coding;locus_tag=AL42_RS24820;old_locus_tag=AL42_03963 NZ_KK316785.1 Protein Homology CDS 342769 343623 . + 0 ID=cds-WP_003420801.1;Parent=gene-AL42_RS24820;Dbxref=GenBank:WP_003420801.1;Name=WP_003420801.1;gbkey=CDS;gene=pirG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218327.1;locus_tag=AL42_RS24820;product=exported repetitive protein;protein_id=WP_003420801.1;transl_table=11 NZ_KK316785.1 RefSeq gene 343786 345447 . + . ID=gene-AL42_RS24825;Name=AL42_RS24825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24825;old_locus_tag=AL42_03964 NZ_KK316785.1 Protein Homology CDS 343786 345447 . + 0 ID=cds-WP_003912357.1;Parent=gene-AL42_RS24825;Dbxref=GenBank:WP_003912357.1;Name=WP_003912357.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912357.1;locus_tag=AL42_RS24825;product=LGFP repeat-containing protein;protein_id=WP_003912357.1;transl_table=11 NZ_KK316785.1 RefSeq gene 345601 347115 . + . ID=gene-AL42_RS24830;Name=AL42_RS24830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24830;old_locus_tag=AL42_03965 NZ_KK316785.1 Protein Homology CDS 345601 347115 . + 0 ID=cds-WP_003420809.1;Parent=gene-AL42_RS24830;Dbxref=GenBank:WP_003420809.1;Name=WP_003420809.1;Ontology_term=GO:0005576,GO:0009986;gbkey=CDS;go_component=extracellular region|0005576||IEA,cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178019.1;locus_tag=AL42_RS24830;product=PE family protein;protein_id=WP_003420809.1;transl_table=11 NZ_KK316785.1 RefSeq gene 347112 347264 . - . ID=gene-AL42_RS0105735;Name=AL42_RS0105735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS0105735 NZ_KK316785.1 Protein Homology CDS 347112 347264 . - 0 ID=cds-WP_003420812.1;Parent=gene-AL42_RS0105735;Dbxref=GenBank:WP_003420812.1;Name=WP_003420812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003420812.1;locus_tag=AL42_RS0105735;product=PIN domain-containing protein;protein_id=WP_003420812.1;transl_table=11 NZ_KK316785.1 RefSeq gene 347424 348245 . - . ID=gene-AL42_RS24835;Name=AL42_RS24835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24835;old_locus_tag=AL42_03966 NZ_KK316785.1 Protein Homology CDS 347424 348245 . - 0 ID=cds-WP_003420817.1;Parent=gene-AL42_RS24835;Dbxref=GenBank:WP_003420817.1;Name=WP_003420817.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218330.1;locus_tag=AL42_RS24835;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_003420817.1;transl_table=11 NZ_KK316785.1 RefSeq gene 348260 349045 . - . ID=gene-AL42_RS24840;Name=AL42_RS24840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24840;old_locus_tag=AL42_03967 NZ_KK316785.1 Protein Homology CDS 348260 349045 . - 0 ID=cds-WP_003420820.1;Parent=gene-AL42_RS24840;Dbxref=GenBank:WP_003420820.1;Name=WP_003420820.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218331.1;locus_tag=AL42_RS24840;product=lysophospholipid acyltransferase family protein;protein_id=WP_003420820.1;transl_table=11 NZ_KK316785.1 RefSeq gene 349063 349818 . - . ID=gene-AL42_RS24845;Name=AL42_RS24845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24845;old_locus_tag=AL42_03968 NZ_KK316785.1 Protein Homology CDS 349063 349818 . - 0 ID=cds-WP_003420824.1;Parent=gene-AL42_RS24845;Dbxref=GenBank:WP_003420824.1;Name=WP_003420824.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218332.1;locus_tag=AL42_RS24845;product=lysophospholipid acyltransferase family protein;protein_id=WP_003420824.1;transl_table=11 NZ_KK316785.1 RefSeq gene 349822 350601 . - . ID=gene-AL42_RS24850;Name=AL42_RS24850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24850;old_locus_tag=AL42_03969 NZ_KK316785.1 Protein Homology CDS 349822 350601 . - 0 ID=cds-WP_003420827.1;Parent=gene-AL42_RS24850;Dbxref=GenBank:WP_003420827.1;Name=WP_003420827.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218333.1;locus_tag=AL42_RS24850;product=lysophospholipid acyltransferase family protein;protein_id=WP_003420827.1;transl_table=11 NZ_KK316785.1 RefSeq gene 350677 351432 . + . ID=gene-AL42_RS24855;Name=AL42_RS24855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24855;old_locus_tag=AL42_03970 NZ_KK316785.1 Protein Homology CDS 350677 351432 . + 0 ID=cds-WP_003420830.1;Parent=gene-AL42_RS24855;Dbxref=GenBank:WP_003420830.1;Name=WP_003420830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218334.1;locus_tag=AL42_RS24855;product=aminoglycoside 3'-phosphotransferase;protein_id=WP_003420830.1;transl_table=11 NZ_KK316785.1 RefSeq gene 351479 353029 . + . ID=gene-AL42_RS24860;Name=AL42_RS24860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24860;old_locus_tag=AL42_03971 NZ_KK316785.1 Protein Homology CDS 351479 353029 . + 0 ID=cds-WP_003420837.1;Parent=gene-AL42_RS24860;Dbxref=GenBank:WP_003420837.1;Name=WP_003420837.1;Ontology_term=GO:0051537;gbkey=CDS;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218335.1;locus_tag=AL42_RS24860;product=MBL fold metallo-hydrolase;protein_id=WP_003420837.1;transl_table=11 NZ_KK316785.1 RefSeq gene 353026 353361 . + . ID=gene-AL42_RS24865;Name=AL42_RS24865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24865;old_locus_tag=AL42_03972 NZ_KK316785.1 Protein Homology CDS 353026 353361 . + 0 ID=cds-WP_003420840.1;Parent=gene-AL42_RS24865;Dbxref=GenBank:WP_003420840.1;Name=WP_003420840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218336.1;locus_tag=AL42_RS24865;product=hypothetical protein;protein_id=WP_003420840.1;transl_table=11 NZ_KK316785.1 RefSeq gene 353449 354855 . - . ID=gene-AL42_RS24870;Name=papA2;gbkey=Gene;gene=papA2;gene_biotype=protein_coding;locus_tag=AL42_RS24870;old_locus_tag=AL42_03973 NZ_KK316785.1 Protein Homology CDS 353449 354855 . - 0 ID=cds-WP_003901737.1;Parent=gene-AL42_RS24870;Dbxref=GenBank:WP_003901737.1;Name=WP_003901737.1;gbkey=CDS;gene=papA2;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178020.1;locus_tag=AL42_RS24870;product=trehalose-2-sulfate acyltransferase;protein_id=WP_003901737.1;transl_table=11 NZ_KK316785.1 RefSeq gene 355003 355716 . + . ID=gene-AL42_RS24875;Name=sap;gbkey=Gene;gene=sap;gene_biotype=protein_coding;locus_tag=AL42_RS24875;old_locus_tag=AL42_03974 NZ_KK316785.1 Protein Homology CDS 355003 355716 . + 0 ID=cds-WP_003420848.1;Parent=gene-AL42_RS24875;Dbxref=GenBank:WP_003420848.1;Name=WP_003420848.1;gbkey=CDS;gene=sap;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218338.1;locus_tag=AL42_RS24875;product=sulfolipid-1 biosynthesis transporter Sap;protein_id=WP_003420848.1;transl_table=11 NZ_KK316785.1 RefSeq gene 355751 356965 . + . ID=gene-AL42_RS24880;Name=chp1;gbkey=Gene;gene=chp1;gene_biotype=protein_coding;locus_tag=AL42_RS24880;old_locus_tag=AL42_03975 NZ_KK316785.1 Protein Homology CDS 355751 356965 . + 0 ID=cds-WP_003899709.1;Parent=gene-AL42_RS24880;Dbxref=GenBank:WP_003899709.1;Name=WP_003899709.1;gbkey=CDS;gene=chp1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218339.1;locus_tag=AL42_RS24880;product=sulfolipid-1 biosynthesis membrane-anchored acyltransferase Chp1;protein_id=WP_003899709.1;transl_table=11 NZ_KK316785.1 RefSeq gene 357290 360559 . - . ID=gene-AL42_RS24885;Name=mmpL8;gbkey=Gene;gene=mmpL8;gene_biotype=protein_coding;locus_tag=AL42_RS24885;old_locus_tag=AL42_03976 NZ_KK316785.1 Protein Homology CDS 357290 360559 . - 0 ID=cds-WP_003899710.1;Parent=gene-AL42_RS24885;Dbxref=GenBank:WP_003899710.1;Name=WP_003899710.1;gbkey=CDS;gene=mmpL8;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218340.1;locus_tag=AL42_RS24885;product=sulfolipid-1 RND transporter MmpL8;protein_id=WP_003899710.1;transl_table=11 NZ_KK316785.1 RefSeq gene 360669 362204 . - . ID=gene-AL42_RS24890;Name=papA1;gbkey=Gene;gene=papA1;gene_biotype=protein_coding;locus_tag=AL42_RS24890;old_locus_tag=AL42_03977 NZ_KK316785.1 Protein Homology CDS 360669 362204 . - 0 ID=cds-WP_003899711.1;Parent=gene-AL42_RS24890;Dbxref=GenBank:WP_003899711.1;Name=WP_003899711.1;gbkey=CDS;gene=papA1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218341.1;locus_tag=AL42_RS24890;product=acyltransferase PapA1;protein_id=WP_003899711.1;transl_table=11 NZ_KK316785.1 RefSeq gene 362255 368635 . - . ID=gene-AL42_RS24895;Name=pks2;gbkey=Gene;gene=pks2;gene_biotype=protein_coding;locus_tag=AL42_RS24895;old_locus_tag=AL42_03978 NZ_KK316785.1 Protein Homology CDS 362255 368635 . - 0 ID=cds-WP_003900763.1;Parent=gene-AL42_RS24895;Dbxref=GenBank:WP_003900763.1;Name=WP_003900763.1;gbkey=CDS;gene=pks2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218342.1;locus_tag=AL42_RS24895;product=phthioceranic/hydroxyphthioceranic acid synthase;protein_id=WP_003900763.1;transl_table=11 NZ_KK316785.1 RefSeq gene 368842 370596 . + . ID=gene-AL42_RS24900;Name=fadD23;gbkey=Gene;gene=fadD23;gene_biotype=protein_coding;locus_tag=AL42_RS24900;old_locus_tag=AL42_03979 NZ_KK316785.1 Protein Homology CDS 368842 370596 . + 0 ID=cds-WP_003901740.1;Parent=gene-AL42_RS24900;Dbxref=GenBank:WP_003901740.1;Name=WP_003901740.1;gbkey=CDS;gene=fadD23;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218343.1;locus_tag=AL42_RS24900;product=long-chain-fatty-acid--CoA ligase FadD23;protein_id=WP_003901740.1;transl_table=11 NZ_KK316785.1 RefSeq pseudogene 370600 371816 . - . ID=gene-AL42_RS24905;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=pseudogene;locus_tag=AL42_RS24905;old_locus_tag=AL42_03980;pseudo=true NZ_KK316785.1 Protein Homology CDS 370600 371816 . - 0 ID=cds-AL42_RS24905;Parent=gene-AL42_RS24905;Note=frameshifted;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217307.1;locus_tag=AL42_RS24905;product=IS607 family element RNA-guided endonuclease TnpB;pseudo=true;transl_table=11 NZ_KK316785.1 RefSeq gene 371816 372397 . - . ID=gene-AL42_RS24910;Name=AL42_RS24910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24910;old_locus_tag=AL42_03981 NZ_KK316785.1 Protein Homology CDS 371816 372397 . - 0 ID=cds-WP_003420870.1;Parent=gene-AL42_RS24910;Dbxref=GenBank:WP_003420870.1;Name=WP_003420870.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_217308.1;locus_tag=AL42_RS24910;product=IS607-like element IS1537 family transposase;protein_id=WP_003420870.1;transl_table=11 NZ_KK316785.1 RefSeq pseudogene 372428 374039 . - . ID=gene-AL42_RS0105745;Name=AL42_RS0105745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS0105745;old_locus_tag=AL42_03982;pseudo=true NZ_KK316785.1 Protein Homology CDS 372428 374039 . - 0 ID=cds-AL42_RS0105745;Parent=gene-AL42_RS0105745;Note=frameshifted;Ontology_term=GO:0016116,GO:0016117,GO:0009055,GO:0016491;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA;go_process=carotenoid metabolic process|0016116||IEA,carotenoid biosynthetic process|0016117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218346.1;locus_tag=AL42_RS0105745;product=phytoene desaturase family protein;pseudo=true;transl_table=11 NZ_KK316785.1 RefSeq pseudogene 374097 374717 . - . ID=gene-AL42_RS27800;Name=AL42_RS27800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS27800;partial=true;pseudo=true;start_range=.,374097 NZ_KK316785.1 Protein Homology CDS 374097 374717 . - 0 ID=cds-AL42_RS27800;Parent=gene-AL42_RS27800;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218347.1;locus_tag=AL42_RS27800;partial=true;product=TetR/AcrR family transcriptional regulator;pseudo=true;start_range=.,374097;transl_table=11 NZ_KK316785.1 RefSeq gene 374789 375271 . + . ID=gene-AL42_RS24915;Name=AL42_RS24915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24915;old_locus_tag=AL42_03983 NZ_KK316785.1 Protein Homology CDS 374789 375271 . + 0 ID=cds-WP_003420879.1;Parent=gene-AL42_RS24915;Dbxref=GenBank:WP_003420879.1;Name=WP_003420879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218348.1;locus_tag=AL42_RS24915;product=DUF2834 domain-containing protein;protein_id=WP_003420879.1;transl_table=11 NZ_KK316785.1 RefSeq gene 375268 375843 . - . ID=gene-AL42_RS24920;Name=AL42_RS24920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24920;old_locus_tag=AL42_03984 NZ_KK316785.1 Protein Homology CDS 375268 375843 . - 0 ID=cds-WP_003420880.1;Parent=gene-AL42_RS24920;Dbxref=GenBank:WP_003420880.1;Name=WP_003420880.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218349.1;locus_tag=AL42_RS24920;product=class I SAM-dependent methyltransferase;protein_id=WP_003420880.1;transl_table=11 NZ_KK316785.1 RefSeq gene 375899 376690 . + . ID=gene-AL42_RS24925;Name=AL42_RS24925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24925;old_locus_tag=AL42_03985 NZ_KK316785.1 Protein Homology CDS 375899 376690 . + 0 ID=cds-WP_003420884.1;Parent=gene-AL42_RS24925;Dbxref=GenBank:WP_003420884.1;Name=WP_003420884.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218350.1;locus_tag=AL42_RS24925;product=AraC family transcriptional regulator;protein_id=WP_003420884.1;transl_table=11 NZ_KK316785.1 RefSeq gene 376687 377946 . - . ID=gene-AL42_RS24930;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=AL42_RS24930;old_locus_tag=AL42_03986 NZ_KK316785.1 Protein Homology CDS 376687 377946 . - 0 ID=cds-WP_003420889.1;Parent=gene-AL42_RS24930;Dbxref=GenBank:WP_003420889.1;Name=WP_003420889.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218351.1;locus_tag=AL42_RS24930;product=serine--tRNA ligase;protein_id=WP_003420889.1;transl_table=11 NZ_KK316785.1 RefSeq gene 378079 379428 . + . ID=gene-AL42_RS24935;Name=AL42_RS24935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24935;old_locus_tag=AL42_03987 NZ_KK316785.1 Protein Homology CDS 378079 379428 . + 0 ID=cds-WP_003906228.1;Parent=gene-AL42_RS24935;Dbxref=GenBank:WP_003906228.1;Name=WP_003906228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218352.1;locus_tag=AL42_RS24935;product=septum formation family protein;protein_id=WP_003906228.1;transl_table=11 NZ_KK316785.1 RefSeq gene 379433 379846 . + . ID=gene-AL42_RS24940;Name=AL42_RS24940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24940;old_locus_tag=AL42_03988 NZ_KK316785.1 Protein Homology CDS 379433 379846 . + 0 ID=cds-WP_003899719.1;Parent=gene-AL42_RS24940;Dbxref=GenBank:WP_003899719.1;Name=WP_003899719.1;Ontology_term=GO:0008237,GO:0008270;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218353.1;locus_tag=AL42_RS24940;product=metallopeptidase family protein;protein_id=WP_003899719.1;transl_table=11 NZ_KK316785.1 RefSeq gene 379843 380064 . + . ID=gene-AL42_RS26670;Name=AL42_RS26670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS26670 NZ_KK316785.1 Protein Homology CDS 379843 380064 . + 0 ID=cds-WP_003912385.1;Parent=gene-AL42_RS26670;Dbxref=GenBank:WP_003912385.1;Name=WP_003912385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912385.1;locus_tag=AL42_RS26670;product=hypothetical protein;protein_id=WP_003912385.1;transl_table=11 NZ_KK316785.1 RefSeq gene 380041 380739 . - . ID=gene-AL42_RS24945;Name=AL42_RS24945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24945;old_locus_tag=AL42_03989 NZ_KK316785.1 Protein Homology CDS 380041 380739 . - 0 ID=cds-WP_003906229.1;Parent=gene-AL42_RS24945;Dbxref=GenBank:WP_003906229.1;Name=WP_003906229.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218354.1;locus_tag=AL42_RS24945;product=histidine phosphatase family protein;protein_id=WP_003906229.1;transl_table=11 NZ_KK316785.1 RefSeq gene 380736 381701 . - . ID=gene-AL42_RS24950;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=AL42_RS24950;old_locus_tag=AL42_03990 NZ_KK316785.1 Protein Homology CDS 380736 381701 . - 0 ID=cds-WP_003420906.1;Parent=gene-AL42_RS24950;Dbxref=GenBank:WP_003420906.1;Name=WP_003420906.1;Ontology_term=GO:0009094,GO:0004664;gbkey=CDS;gene=pheA;go_function=prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218355.1;locus_tag=AL42_RS24950;product=prephenate dehydratase;protein_id=WP_003420906.1;transl_table=11 NZ_KK316785.1 RefSeq gene 381797 382573 . + . ID=gene-AL42_RS24955;Name=AL42_RS24955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24955;old_locus_tag=AL42_03991 NZ_KK316785.1 Protein Homology CDS 381797 382573 . + 0 ID=cds-WP_003420910.1;Parent=gene-AL42_RS24955;Dbxref=GenBank:WP_003420910.1;Name=WP_003420910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218356.1;locus_tag=AL42_RS24955;product=DUF2470 domain-containing protein;protein_id=WP_003420910.1;transl_table=11 NZ_KK316785.1 RefSeq pseudogene 382644 382964 . + . ID=gene-AL42_RS24960;Name=AL42_RS24960;end_range=382964,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS24960;old_locus_tag=AL42_03992;partial=true;pseudo=true;start_range=.,382644 NZ_KK316785.1 Protein Homology CDS 382644 382964 . + 0 ID=cds-AL42_RS24960;Parent=gene-AL42_RS24960;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0070726;end_range=382964,.;gbkey=CDS;go_process=cell wall assembly|0070726||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020188363.1;locus_tag=AL42_RS24960;partial=true;product=LCP family protein;pseudo=true;start_range=.,382644;transl_table=11 NZ_KK316785.1 RefSeq gene 383210 383755 . + . ID=gene-AL42_RS24965;Name=bfrB;gbkey=Gene;gene=bfrB;gene_biotype=protein_coding;locus_tag=AL42_RS24965;old_locus_tag=AL42_03993 NZ_KK316785.1 Protein Homology CDS 383210 383755 . + 0 ID=cds-WP_003420920.1;Parent=gene-AL42_RS24965;Dbxref=GenBank:WP_003420920.1;Name=WP_003420920.1;gbkey=CDS;gene=bfrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218358.1;locus_tag=AL42_RS24965;product=ferritin BfrB;protein_id=WP_003420920.1;transl_table=11 NZ_KK316785.1 RefSeq gene 383770 384594 . - . ID=gene-AL42_RS24970;Name=AL42_RS24970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24970;old_locus_tag=AL42_03994 NZ_KK316785.1 Protein Homology CDS 383770 384594 . - 0 ID=cds-WP_003901745.1;Parent=gene-AL42_RS24970;Dbxref=GenBank:WP_003901745.1;Name=WP_003901745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218359.1;locus_tag=AL42_RS24970;product=glycerophosphodiester phosphodiesterase;protein_id=WP_003901745.1;transl_table=11 NZ_KK316785.1 RefSeq gene 384600 385628 . - . ID=gene-AL42_RS24975;Name=AL42_RS24975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24975;old_locus_tag=AL42_03995 NZ_KK316785.1 Protein Homology CDS 384600 385628 . - 0 ID=cds-WP_003899726.1;Parent=gene-AL42_RS24975;Dbxref=GenBank:WP_003899726.1;Name=WP_003899726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218360.1;locus_tag=AL42_RS24975;product=DUF4328 domain-containing protein;protein_id=WP_003899726.1;transl_table=11 NZ_KK316785.1 RefSeq gene 386167 386316 . + . ID=gene-AL42_RS27350;Name=AL42_RS27350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27350 NZ_KK316785.1 Protein Homology CDS 386167 386316 . + 0 ID=cds-WP_003420934.1;Parent=gene-AL42_RS27350;Dbxref=GenBank:WP_003420934.1;Name=WP_003420934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003420934.1;locus_tag=AL42_RS27350;product=hypothetical protein;protein_id=WP_003420934.1;transl_table=11 NZ_KK316785.1 RefSeq pseudogene 387101 387338 . + . ID=gene-AL42_RS27805;Name=AL42_RS27805;end_range=387338,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS27805;partial=true;pseudo=true;start_range=.,387101 NZ_KK316785.1 Protein Homology CDS 387101 387338 . + 0 ID=cds-AL42_RS27805;Parent=gene-AL42_RS27805;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=387338,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900311.1;locus_tag=AL42_RS27805;partial=true;product=ISL3 family transposase;pseudo=true;start_range=.,387101;transl_table=11 NZ_KK316785.1 RefSeq gene 387807 388298 . + . ID=gene-AL42_RS24980;Name=AL42_RS24980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24980;old_locus_tag=AL42_03996 NZ_KK316785.1 Protein Homology CDS 387807 388298 . + 0 ID=cds-WP_003422266.1-2;Parent=gene-AL42_RS24980;Dbxref=GenBank:WP_003422266.1;Name=WP_003422266.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013698.7;locus_tag=AL42_RS24980;product=IS110 family transposase;protein_id=WP_003422266.1;transl_table=11 NZ_KK316785.1 RefSeq gene 388313 388672 . + . ID=gene-AL42_RS24985;Name=AL42_RS24985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24985;old_locus_tag=AL42_03997 NZ_KK316785.1 Protein Homology CDS 388313 388672 . + 0 ID=cds-WP_003900767.1;Parent=gene-AL42_RS24985;Dbxref=GenBank:WP_003900767.1;Name=WP_003900767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218362.1;locus_tag=AL42_RS24985;product=hypothetical protein;protein_id=WP_003900767.1;transl_table=11 NZ_KK316785.1 RefSeq gene 389286 389450 . - . ID=gene-AL42_RS27355;Name=AL42_RS27355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27355 NZ_KK316785.1 Protein Homology CDS 389286 389450 . - 0 ID=cds-WP_003399671.1;Parent=gene-AL42_RS27355;Dbxref=GenBank:WP_003399671.1;Name=WP_003399671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003399671.1;locus_tag=AL42_RS27355;product=hypothetical protein;protein_id=WP_003399671.1;transl_table=11 NZ_KK316785.1 RefSeq gene 389736 390359 . + . ID=gene-AL42_RS24990;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=AL42_RS24990;old_locus_tag=AL42_03998 NZ_KK316785.1 Protein Homology CDS 389736 390359 . + 0 ID=cds-WP_003399735.1;Parent=gene-AL42_RS24990;Dbxref=GenBank:WP_003399735.1;Name=WP_003399735.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218363.1;locus_tag=AL42_RS24990;product=superoxide dismutase;protein_id=WP_003399735.1;transl_table=11 NZ_KK316785.1 RefSeq pseudogene 390570 391102 . + . ID=gene-AL42_RS0105770;Name=AL42_RS0105770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS0105770;old_locus_tag=AL42_03999;pseudo=true NZ_KK316785.1 Protein Homology CDS 390570 391102 . + 0 ID=cds-AL42_RS0105770;Parent=gene-AL42_RS0105770;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218364.1;locus_tag=AL42_RS0105770;product=peptidase;pseudo=true;transl_table=11 NZ_KK316785.1 RefSeq gene 391357 392265 . + . ID=gene-AL42_RS24995;Name=AL42_RS24995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS24995;old_locus_tag=AL42_04000 NZ_KK316785.1 Protein Homology CDS 391357 392265 . + 0 ID=cds-WP_003399745.1;Parent=gene-AL42_RS24995;Dbxref=GenBank:WP_003399745.1;Name=WP_003399745.1;Ontology_term=GO:0030001,GO:0046873,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218365.1;locus_tag=AL42_RS24995;product=TMEM165/GDT1 family protein;protein_id=WP_003399745.1;transl_table=11 NZ_KK316785.1 RefSeq gene 392530 392928 . + . ID=gene-AL42_RS25000;Name=espR;gbkey=Gene;gene=espR;gene_biotype=protein_coding;locus_tag=AL42_RS25000;old_locus_tag=AL42_04001 NZ_KK316785.1 Protein Homology CDS 392530 392928 . + 0 ID=cds-WP_003399759.1;Parent=gene-AL42_RS25000;Dbxref=GenBank:WP_003399759.1;Name=WP_003399759.1;gbkey=CDS;gene=espR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218366.1;locus_tag=AL42_RS25000;product=type VII secretion system ESX-1 transcriptional regulator EspR;protein_id=WP_003399759.1;transl_table=11 NZ_KK316785.1 RefSeq gene 393046 393702 . + . ID=gene-AL42_RS25005;Name=AL42_RS25005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS25005;old_locus_tag=AL42_04002 NZ_KK316785.1 Protein Homology CDS 393046 393702 . + 0 ID=cds-WP_003399771.1;Parent=gene-AL42_RS25005;Dbxref=GenBank:WP_003399771.1;Name=WP_003399771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218367.1;locus_tag=AL42_RS25005;product=DUF6474 family protein;protein_id=WP_003399771.1;transl_table=11 NZ_KK316785.1 RefSeq gene 393714 393998 . + . ID=gene-AL42_RS25010;Name=AL42_RS25010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS25010;old_locus_tag=AL42_04003 NZ_KK316785.1 Protein Homology CDS 393714 393998 . + 0 ID=cds-WP_003399775.1;Parent=gene-AL42_RS25010;Dbxref=GenBank:WP_003399775.1;Name=WP_003399775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218368.1;locus_tag=AL42_RS25010;product=hypothetical protein;protein_id=WP_003399775.1;transl_table=11 NZ_KK316785.1 RefSeq gene 394105 394509 . + . ID=gene-AL42_RS25015;Name=AL42_RS25015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS25015;old_locus_tag=AL42_04004 NZ_KK316785.1 Protein Homology CDS 394105 394509 . + 0 ID=cds-WP_003399779.1;Parent=gene-AL42_RS25015;Dbxref=GenBank:WP_003399779.1;Name=WP_003399779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218369.1;locus_tag=AL42_RS25015;product=Rv3852 family protein;protein_id=WP_003399779.1;transl_table=11 NZ_KK316785.1 RefSeq gene 394526 394999 . + . ID=gene-AL42_RS25020;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=AL42_RS25020;old_locus_tag=AL42_04005 NZ_KK316785.1 Protein Homology CDS 394526 394999 . + 0 ID=cds-WP_003399786.1;Parent=gene-AL42_RS25020;Dbxref=GenBank:WP_003399786.1;Name=WP_003399786.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218370.1;locus_tag=AL42_RS25020;product=ribonuclease E activity regulator RraA;protein_id=WP_003399786.1;transl_table=11 NZ_KK316785.1 RefSeq gene 395035 396504 . - . ID=gene-AL42_RS25025;Name=ethA;gbkey=Gene;gene=ethA;gene_biotype=protein_coding;locus_tag=AL42_RS25025;old_locus_tag=AL42_04006 NZ_KK316785.1 Protein Homology CDS 395035 396504 . - 0 ID=cds-WP_003899731.1;Parent=gene-AL42_RS25025;Dbxref=GenBank:WP_003899731.1;Name=WP_003899731.1;gbkey=CDS;gene=ethA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218371.1;locus_tag=AL42_RS25025;product=FAD-containing monooxygenase EthA;protein_id=WP_003899731.1;transl_table=11 NZ_KK316785.1 RefSeq gene 396580 397230 . + . ID=gene-AL42_RS25030;Name=ethR;gbkey=Gene;gene=ethR;gene_biotype=protein_coding;locus_tag=AL42_RS25030;old_locus_tag=AL42_04007 NZ_KK316785.1 Protein Homology CDS 396580 397230 . + 0 ID=cds-WP_003399797.1;Parent=gene-AL42_RS25030;Dbxref=GenBank:WP_003399797.1;Name=WP_003399797.1;gbkey=CDS;gene=ethR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218372.1;locus_tag=AL42_RS25030;product=HTH-type transcriptional regulator EthR;protein_id=WP_003399797.1;transl_table=11 NZ_KK316785.1 RefSeq gene 397432 398439 . - . ID=gene-AL42_RS25035;Name=AL42_RS25035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS25035;old_locus_tag=AL42_04008 NZ_KK316785.1 Protein Homology CDS 397432 398439 . - 0 ID=cds-WP_003399801.1;Parent=gene-AL42_RS25035;Dbxref=GenBank:WP_003399801.1;Name=WP_003399801.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218373.1;locus_tag=AL42_RS25035;product=PHP domain-containing protein;protein_id=WP_003399801.1;transl_table=11 NZ_KK316785.1 RefSeq gene 398448 398645 . - . ID=gene-AL42_RS25040;Name=AL42_RS25040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS25040;old_locus_tag=AL42_04009 NZ_KK316785.1 GeneMarkS-2+ CDS 398448 398645 . - 0 ID=cds-WP_003399803.1;Parent=gene-AL42_RS25040;Dbxref=GenBank:WP_003399803.1;Name=WP_003399803.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AL42_RS25040;product=hypothetical protein;protein_id=WP_003399803.1;transl_table=11 NZ_KK316785.1 RefSeq gene 399070 400536 . - . ID=gene-AL42_RS25045;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;locus_tag=AL42_RS25045;old_locus_tag=AL42_04011 NZ_KK316785.1 Protein Homology CDS 399070 400536 . - 0 ID=cds-WP_003899732.1;Parent=gene-AL42_RS25045;Dbxref=GenBank:WP_003899732.1;Name=WP_003899732.1;gbkey=CDS;gene=gltD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218375.1;locus_tag=AL42_RS25045;product=glutamate synthase subunit beta;protein_id=WP_003899732.1;transl_table=11 NZ_KK316785.1 RefSeq gene 400529 405112 . - . ID=gene-AL42_RS25050;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=AL42_RS25050;old_locus_tag=AL42_04012 NZ_KK316785.1 Protein Homology CDS 400529 405112 . - 0 ID=cds-WP_003899733.1;Parent=gene-AL42_RS25050;Dbxref=GenBank:WP_003899733.1;Name=WP_003899733.1;Ontology_term=GO:0006537,GO:0008152,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218376.1;locus_tag=AL42_RS25050;product=glutamate synthase large subunit;protein_id=WP_003899733.1;transl_table=11 NZ_KK316785.1 RefSeq gene 405808 406980 . + . ID=gene-AL42_RS25055;Name=AL42_RS25055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS25055;old_locus_tag=AL42_04013 NZ_KK316785.1 Protein Homology CDS 405808 406980 . + 0 ID=cds-WP_003399818.1;Parent=gene-AL42_RS25055;Dbxref=GenBank:WP_003399818.1;Name=WP_003399818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218377.1;locus_tag=AL42_RS25055;product=MinD/ParA family ATP-binding protein;protein_id=WP_003399818.1;transl_table=11 NZ_KK316785.1 RefSeq gene 406977 407303 . + . ID=gene-AL42_RS25060;Name=AL42_RS25060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS25060;old_locus_tag=AL42_04014 NZ_KK316785.1 Protein Homology CDS 406977 407303 . + 0 ID=cds-WP_003902567.1;Parent=gene-AL42_RS25060;Dbxref=GenBank:WP_003902567.1;Name=WP_003902567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218378.1;locus_tag=AL42_RS25060;product=hypothetical protein;protein_id=WP_003902567.1;transl_table=11 NZ_KK316785.1 RefSeq gene 407202 407552 . - . ID=gene-AL42_RS25065;Name=whiB6;gbkey=Gene;gene=whiB6;gene_biotype=protein_coding;locus_tag=AL42_RS25065;old_locus_tag=AL42_04015 NZ_KK316785.1 Protein Homology CDS 407202 407552 . - 0 ID=cds-WP_003899734.1;Parent=gene-AL42_RS25065;Dbxref=GenBank:WP_003899734.1;Name=WP_003899734.1;gbkey=CDS;gene=whiB6;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899734.1;locus_tag=AL42_RS25065;product=transcriptional regulator WhiB6;protein_id=WP_003899734.1;transl_table=11 NZ_KK316785.1 RefSeq gene 407945 409057 . + . ID=gene-AL42_RS25070;Name=AL42_RS25070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS25070;old_locus_tag=AL42_04016 NZ_KK316785.1 Protein Homology CDS 407945 409057 . + 0 ID=cds-WP_015288657.1;Parent=gene-AL42_RS25070;Dbxref=GenBank:WP_015288657.1;Name=WP_015288657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015291786.1;locus_tag=AL42_RS25070;product=ESX-1 type VII secretion system transcriptional regulator EspM;protein_id=WP_015288657.1;transl_table=11 NZ_KK316785.1 RefSeq gene 409300 410508 . + . ID=gene-AL42_RS25075;Name=espE;gbkey=Gene;gene=espE;gene_biotype=protein_coding;locus_tag=AL42_RS25075;old_locus_tag=AL42_04017 NZ_KK316785.1 Protein Homology CDS 409300 410508 . + 0 ID=cds-WP_003899736.1;Parent=gene-AL42_RS25075;Dbxref=GenBank:WP_003899736.1;Name=WP_003899736.1;gbkey=CDS;gene=espE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218381.1;locus_tag=AL42_RS25075;product=type VII secretion system ESX-1 associated protein EspE;protein_id=WP_003899736.1;transl_table=11 NZ_KK316785.1 RefSeq gene 410596 410907 . + . ID=gene-AL42_RS25080;Name=espF;gbkey=Gene;gene=espF;gene_biotype=protein_coding;locus_tag=AL42_RS25080;old_locus_tag=AL42_04018 NZ_KK316785.1 Protein Homology CDS 410596 410907 . + 0 ID=cds-WP_003899737.1;Parent=gene-AL42_RS25080;Dbxref=GenBank:WP_003899737.1;Name=WP_003899737.1;gbkey=CDS;gene=espF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218382.1;locus_tag=AL42_RS25080;product=type VII secretion system ESX-1 associated protein EspF;protein_id=WP_003899737.1;transl_table=11 NZ_KK316785.1 RefSeq gene 410910 411761 . + . ID=gene-AL42_RS25085;Name=espG1;gbkey=Gene;gene=espG1;gene_biotype=protein_coding;locus_tag=AL42_RS25085;old_locus_tag=AL42_04019 NZ_KK316785.1 Protein Homology CDS 410910 411761 . + 0 ID=cds-WP_003399839.1;Parent=gene-AL42_RS25085;Dbxref=GenBank:WP_003399839.1;Name=WP_003399839.1;gbkey=CDS;gene=espG1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218383.1;locus_tag=AL42_RS25085;product=type VII secretion system ESX-1 adaptor EspG1;protein_id=WP_003399839.1;transl_table=11 NZ_KK316785.1 RefSeq gene 411800 412351 . + . ID=gene-AL42_RS25090;Name=espH;gbkey=Gene;gene=espH;gene_biotype=protein_coding;locus_tag=AL42_RS25090;old_locus_tag=AL42_04020 NZ_KK316785.1 Protein Homology CDS 411800 412351 . + 0 ID=cds-WP_003399844.1;Parent=gene-AL42_RS25090;Dbxref=GenBank:WP_003399844.1;Name=WP_003399844.1;gbkey=CDS;gene=espH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218384.1;locus_tag=AL42_RS25090;product=type VII secretion system ESX-1 associated protein EspH;protein_id=WP_003399844.1;transl_table=11 NZ_KK316785.1 RefSeq gene 412344 414065 . + . ID=gene-AL42_RS25095;Name=eccA1;gbkey=Gene;gene=eccA1;gene_biotype=protein_coding;locus_tag=AL42_RS25095;old_locus_tag=AL42_04021 NZ_KK316785.1 Protein Homology CDS 412344 414065 . + 0 ID=cds-WP_003399850.1;Parent=gene-AL42_RS25095;Dbxref=GenBank:WP_003399850.1;Name=WP_003399850.1;gbkey=CDS;gene=eccA1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218385.1;locus_tag=AL42_RS25095;product=type VII secretion system ESX-1 AAA family ATPase EccA1;protein_id=WP_003399850.1;transl_table=11 NZ_KK316785.1 RefSeq gene 414069 415511 . + . ID=gene-AL42_RS25100;Name=eccB1;gbkey=Gene;gene=eccB1;gene_biotype=protein_coding;locus_tag=AL42_RS25100;old_locus_tag=AL42_04022 NZ_KK316785.1 Protein Homology CDS 414069 415511 . + 0 ID=cds-WP_003399854.1;Parent=gene-AL42_RS25100;Dbxref=GenBank:WP_003399854.1;Name=WP_003399854.1;gbkey=CDS;gene=eccB1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218386.1;locus_tag=AL42_RS25100;product=type VII secretion system ESX-1 subunit EccB1;protein_id=WP_003399854.1;transl_table=11 NZ_KK316785.1 RefSeq gene 415511 417754 . + . ID=gene-AL42_RS25105;Name=eccCa1;gbkey=Gene;gene=eccCa1;gene_biotype=protein_coding;locus_tag=AL42_RS25105;old_locus_tag=AL42_04023 NZ_KK316785.1 Protein Homology CDS 415511 417754 . + 0 ID=cds-WP_003899738.1;Parent=gene-AL42_RS25105;Dbxref=GenBank:WP_003899738.1;Name=WP_003899738.1;gbkey=CDS;gene=eccCa1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218387.1;locus_tag=AL42_RS25105;product=type VII secretion system ESX-1 FtsK/SpoIIIE family ATPase EccCa1;protein_id=WP_003899738.1;transl_table=11 NZ_KK316785.1 RefSeq pseudogene 417770 417843 . + . ID=gene-AL42_RS28225;Name=AL42_RS28225;end_range=417843,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS28225;partial=true;pseudo=true NZ_KK316785.1 Protein Homology CDS 417770 417843 . + 0 ID=cds-AL42_RS28225;Parent=gene-AL42_RS28225;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=417843,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_216909.1;locus_tag=AL42_RS28225;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_KK316785.1 RefSeq gene 417857 419632 . + . ID=gene-AL42_RS25110;Name=eccCb1;gbkey=Gene;gene=eccCb1;gene_biotype=protein_coding;locus_tag=AL42_RS25110;old_locus_tag=AL42_04024 NZ_KK316785.1 Protein Homology CDS 417857 419632 . + 0 ID=cds-WP_003399865.1;Parent=gene-AL42_RS25110;Dbxref=GenBank:WP_003399865.1;Name=WP_003399865.1;gbkey=CDS;gene=eccCb1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218388.1;locus_tag=AL42_RS25110;product=type VII secretion system ESX-1 FtsK/SpoIIIE family ATPase EccCb1;protein_id=WP_003399865.1;transl_table=11 NZ_KK316785.1 RefSeq gene 419775 420071 . + . ID=gene-AL42_RS25115;Name=AL42_RS25115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS25115;old_locus_tag=AL42_04025 NZ_KK316785.1 Protein Homology CDS 419775 420071 . + 0 ID=cds-WP_003399870.1;Parent=gene-AL42_RS25115;Dbxref=GenBank:WP_003399870.1;Name=WP_003399870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015288658.1;locus_tag=AL42_RS25115;product=type VII secretion system ESX-1 target PE35;protein_id=WP_003399870.1;transl_table=11 NZ_KK316785.1 RefSeq gene 420105 421211 . + . ID=gene-AL42_RS25120;Name=AL42_RS25120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS25120;old_locus_tag=AL42_04026 NZ_KK316785.1 Protein Homology CDS 420105 421211 . + 0 ID=cds-WP_003399879.1;Parent=gene-AL42_RS25120;Dbxref=GenBank:WP_003399879.1;Name=WP_003399879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178022.1;locus_tag=AL42_RS25120;product=type VII secretion system ESX-1 target PPE68;protein_id=WP_003399879.1;transl_table=11 NZ_KK316785.1 RefSeq gene 421304 421606 . + . ID=gene-AL42_RS25125;Name=esxB;gbkey=Gene;gene=esxB;gene_biotype=protein_coding;locus_tag=AL42_RS25125;old_locus_tag=AL42_04027 NZ_KK316785.1 Protein Homology CDS 421304 421606 . + 0 ID=cds-WP_003399940.1;Parent=gene-AL42_RS25125;Dbxref=GenBank:WP_003399940.1;Name=WP_003399940.1;gbkey=CDS;gene=esxB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218391.1;locus_tag=AL42_RS25125;product=type VII secretion system ESX-1 WXG100 family target CFP-10;protein_id=WP_003399940.1;transl_table=11 NZ_KK316785.1 RefSeq gene 421639 421926 . + . ID=gene-AL42_RS25130;Name=esxA;gbkey=Gene;gene=esxA;gene_biotype=protein_coding;locus_tag=AL42_RS25130;old_locus_tag=AL42_04028 NZ_KK316785.1 Protein Homology CDS 421639 421926 . + 0 ID=cds-WP_003399963.1;Parent=gene-AL42_RS25130;Dbxref=GenBank:WP_003399963.1;Name=WP_003399963.1;gbkey=CDS;gene=esxA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178023.1;locus_tag=AL42_RS25130;product=type VII secretion system ESX-1 WXG100 family target ESAT-6;protein_id=WP_003399963.1;transl_table=11 NZ_KK316785.1 RefSeq gene 422040 424040 . + . ID=gene-AL42_RS25135;Name=espI;gbkey=Gene;gene=espI;gene_biotype=protein_coding;locus_tag=AL42_RS25135;old_locus_tag=AL42_04029 NZ_KK316785.1 Protein Homology CDS 422040 424040 . + 0 ID=cds-WP_003909105.1;Parent=gene-AL42_RS25135;Dbxref=GenBank:WP_003909105.1;Name=WP_003909105.1;gbkey=CDS;gene=espI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218393.1;locus_tag=AL42_RS25135;product=type VII secretion system ESX-1 associated protein EspI;protein_id=WP_003909105.1;transl_table=11 NZ_KK316785.1 RefSeq gene 424037 425572 . + . ID=gene-AL42_RS25140;Name=eccD1;gbkey=Gene;gene=eccD1;gene_biotype=protein_coding;locus_tag=AL42_RS25140;old_locus_tag=AL42_04030 NZ_KK316785.1 Protein Homology CDS 424037 425572 . + 0 ID=cds-WP_003399976.1;Parent=gene-AL42_RS25140;Dbxref=GenBank:WP_003399976.1;Name=WP_003399976.1;gbkey=CDS;gene=eccD1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218394.1;locus_tag=AL42_RS25140;product=type VII secretion system ESX-1 subunit EccD1;protein_id=WP_003399976.1;transl_table=11 NZ_KK316785.1 RefSeq gene 425723 426565 . + . ID=gene-AL42_RS25145;Name=espJ;gbkey=Gene;gene=espJ;gene_biotype=protein_coding;locus_tag=AL42_RS25145;old_locus_tag=AL42_04031 NZ_KK316785.1 Protein Homology CDS 425723 426565 . + 0 ID=cds-WP_003901751.1;Parent=gene-AL42_RS25145;Dbxref=GenBank:WP_003901751.1;Name=WP_003901751.1;gbkey=CDS;gene=espJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218395.1;locus_tag=AL42_RS25145;product=type VII secretion system ESX-1 associated protein EspJ;protein_id=WP_003901751.1;transl_table=11 NZ_KK316785.1 RefSeq gene 426623 428812 . - . ID=gene-AL42_RS25150;Name=espK;gbkey=Gene;gene=espK;gene_biotype=protein_coding;locus_tag=AL42_RS25150;old_locus_tag=AL42_04032 NZ_KK316785.1 Protein Homology CDS 426623 428812 . - 0 ID=cds-WP_015575386.1;Parent=gene-AL42_RS25150;Dbxref=GenBank:WP_015575386.1;Name=WP_015575386.1;gbkey=CDS;gene=espK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015304039.1;locus_tag=AL42_RS25150;product=type VII secretion system ESX-1 associated protein EspK;protein_id=WP_015575386.1;transl_table=11 NZ_KK316785.1 RefSeq gene 429229 429576 . - . ID=gene-AL42_RS25155;Name=espL;gbkey=Gene;gene=espL;gene_biotype=protein_coding;locus_tag=AL42_RS25155;old_locus_tag=AL42_04033 NZ_KK316785.1 Protein Homology CDS 429229 429576 . - 0 ID=cds-WP_003399988.1;Parent=gene-AL42_RS25155;Dbxref=GenBank:WP_003399988.1;Name=WP_003399988.1;gbkey=CDS;gene=espL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218397.1;locus_tag=AL42_RS25155;product=type VII secretion system ESX-1 associated protein EspL;protein_id=WP_003399988.1;transl_table=11 NZ_KK316785.1 RefSeq gene 429573 430955 . - . ID=gene-AL42_RS25160;Name=espB;gbkey=Gene;gene=espB;gene_biotype=protein_coding;locus_tag=AL42_RS25160;old_locus_tag=AL42_04034 NZ_KK316785.1 Protein Homology CDS 429573 430955 . - 0 ID=cds-WP_003399995.1;Parent=gene-AL42_RS25160;Dbxref=GenBank:WP_003399995.1;Name=WP_003399995.1;gbkey=CDS;gene=espB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218398.1;locus_tag=AL42_RS25160;product=EspB family ESX-1 secretion system-associated protein;protein_id=WP_003399995.1;transl_table=11 NZ_KK316785.1 RefSeq gene 431062 432450 . - . ID=gene-AL42_RS25165;Name=eccE1;gbkey=Gene;gene=eccE1;gene_biotype=protein_coding;locus_tag=AL42_RS25165;old_locus_tag=AL42_04035 NZ_KK316785.1 Protein Homology CDS 431062 432450 . - 0 ID=cds-WP_003400000.1;Parent=gene-AL42_RS25165;Dbxref=GenBank:WP_003400000.1;Name=WP_003400000.1;gbkey=CDS;gene=eccE1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218399.1;locus_tag=AL42_RS25165;product=type VII secretion system ESX-1 subunit EccE1;protein_id=WP_003400000.1;transl_table=11 NZ_KK316785.1 RefSeq gene 432447 433787 . - . ID=gene-AL42_RS25170;Name=mycP1;gbkey=Gene;gene=mycP1;gene_biotype=protein_coding;locus_tag=AL42_RS25170;old_locus_tag=AL42_04036 NZ_KK316785.1 Protein Homology CDS 432447 433787 . - 0 ID=cds-WP_003400004.1;Parent=gene-AL42_RS25170;Dbxref=GenBank:WP_003400004.1;Name=WP_003400004.1;gbkey=CDS;gene=mycP1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218400.1;locus_tag=AL42_RS25170;product=type VII secretion system ESX-1 serine protease mycosin MycP1;protein_id=WP_003400004.1;transl_table=11 NZ_KK316785.1 RefSeq gene 434009 435868 . - . ID=gene-AL42_RS25175;Name=eccA2;gbkey=Gene;gene=eccA2;gene_biotype=protein_coding;locus_tag=AL42_RS25175;old_locus_tag=AL42_04037 NZ_KK316785.1 Protein Homology CDS 434009 435868 . - 0 ID=cds-WP_003400005.1;Parent=gene-AL42_RS25175;Dbxref=GenBank:WP_003400005.1;Name=WP_003400005.1;gbkey=CDS;gene=eccA2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218401.1;locus_tag=AL42_RS25175;product=type VII secretion system ESX-2 AAA family ATPase EccA2;protein_id=WP_003400005.1;transl_table=11 NZ_KK316785.1 RefSeq gene 435938 437551 . - . ID=gene-AL42_RS25180;Name=eccE2;gbkey=Gene;gene=eccE2;gene_biotype=protein_coding;locus_tag=AL42_RS25180;old_locus_tag=AL42_04038 NZ_KK316785.1 Protein Homology CDS 435938 437551 . - 0 ID=cds-WP_003902572.1;Parent=gene-AL42_RS25180;Dbxref=GenBank:WP_003902572.1;Name=WP_003902572.1;gbkey=CDS;gene=eccE2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218402.1;locus_tag=AL42_RS25180;product=type VII secretion system ESX-2 subunit EccE2;protein_id=WP_003902572.1;transl_table=11 NZ_KK316785.1 RefSeq gene 437548 439200 . - . ID=gene-AL42_RS25185;Name=mycP2;gbkey=Gene;gene=mycP2;gene_biotype=protein_coding;locus_tag=AL42_RS25185;old_locus_tag=AL42_04039 NZ_KK316785.1 Protein Homology CDS 437548 439200 . - 0 ID=cds-WP_003400012.1;Parent=gene-AL42_RS25185;Dbxref=GenBank:WP_003400012.1;Name=WP_003400012.1;gbkey=CDS;gene=mycP2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218403.1;locus_tag=AL42_RS25185;product=type VII secretion system ESX-2 serine protease mycosin MycP2;protein_id=WP_003400012.1;transl_table=11 NZ_KK316785.1 RefSeq gene 439185 440714 . - . ID=gene-AL42_RS25190;Name=eccD2;gbkey=Gene;gene=eccD2;gene_biotype=protein_coding;locus_tag=AL42_RS25190;old_locus_tag=AL42_04040 NZ_KK316785.1 Protein Homology CDS 439185 440714 . - 0 ID=cds-WP_003900775.1;Parent=gene-AL42_RS25190;Dbxref=GenBank:WP_003900775.1;Name=WP_003900775.1;gbkey=CDS;gene=eccD2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218404.1;locus_tag=AL42_RS25190;product=type VII secretion system ESX-2 subunit EccD2;protein_id=WP_003900775.1;transl_table=11 NZ_KK316785.1 RefSeq gene 440711 441736 . - . ID=gene-AL42_RS25195;Name=AL42_RS25195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS25195;old_locus_tag=AL42_04041 NZ_KK316785.1 Protein Homology CDS 440711 441736 . - 0 ID=cds-WP_003899748.1;Parent=gene-AL42_RS25195;Dbxref=GenBank:WP_003899748.1;Name=WP_003899748.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218405.1;locus_tag=AL42_RS25195;product=MinD/ParA family ATP-binding protein;protein_id=WP_003899748.1;transl_table=11 NZ_KK316785.1 RefSeq gene 441830 442660 . - . ID=gene-AL42_RS25200;Name=espG2;gbkey=Gene;gene=espG2;gene_biotype=protein_coding;locus_tag=AL42_RS25200;old_locus_tag=AL42_04042 NZ_KK316785.1 Protein Homology CDS 441830 442660 . - 0 ID=cds-WP_003400028.1;Parent=gene-AL42_RS25200;Dbxref=GenBank:WP_003400028.1;Name=WP_003400028.1;gbkey=CDS;gene=espG2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218406.1;locus_tag=AL42_RS25200;product=type VII secretion system ESX-2 associated protein EspG2;protein_id=WP_003400028.1;transl_table=11 NZ_KK316785.1 RefSeq gene 442756 443043 . - . ID=gene-AL42_RS25205;Name=esxC;gbkey=Gene;gene=esxC;gene_biotype=protein_coding;locus_tag=AL42_RS25205;old_locus_tag=AL42_04043 NZ_KK316785.1 Protein Homology CDS 442756 443043 . - 0 ID=cds-WP_003899750.1;Parent=gene-AL42_RS25205;Dbxref=GenBank:WP_003899750.1;Name=WP_003899750.1;Ontology_term=GO:0005576;gbkey=CDS;gene=esxC;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218407.1;locus_tag=AL42_RS25205;product=WXG100 family type VII secretion target;protein_id=WP_003899750.1;transl_table=11 NZ_KK316785.1 RefSeq gene 443079 443402 . - . ID=gene-AL42_RS25210;Name=esxD;gbkey=Gene;gene=esxD;gene_biotype=protein_coding;locus_tag=AL42_RS25210;old_locus_tag=AL42_04044 NZ_KK316785.1 Protein Homology CDS 443079 443402 . - 0 ID=cds-WP_003899751.1;Parent=gene-AL42_RS25210;Dbxref=GenBank:WP_003899751.1;Name=WP_003899751.1;Ontology_term=GO:0005576;gbkey=CDS;gene=esxD;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218408.1;locus_tag=AL42_RS25210;product=WXG100 family type VII secretion target;protein_id=WP_003899751.1;transl_table=11 NZ_KK316785.1 RefSeq gene 443514 444713 . - . ID=gene-AL42_RS25215;Name=AL42_RS25215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS25215;old_locus_tag=AL42_04045 NZ_KK316785.1 Protein Homology CDS 443514 444713 . - 0 ID=cds-WP_003899752.1;Parent=gene-AL42_RS25215;Dbxref=GenBank:WP_003899752.1;Name=WP_003899752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178024.1;locus_tag=AL42_RS25215;product=PPE family protein;protein_id=WP_003899752.1;transl_table=11 NZ_KK316785.1 RefSeq gene 444792 445025 . - . ID=gene-AL42_RS25220;Name=AL42_RS25220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS25220;old_locus_tag=AL42_04046 NZ_KK316785.1 Protein Homology CDS 444792 445025 . - 0 ID=cds-WP_031721852.1;Parent=gene-AL42_RS25220;Dbxref=GenBank:WP_031721852.1;Name=WP_031721852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178025.1;locus_tag=AL42_RS25220;product=PE domain-containing protein;protein_id=WP_031721852.1;transl_table=11 NZ_KK316785.1 RefSeq gene 445104 445268 . - . ID=gene-AL42_RS27360;Name=AL42_RS27360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27360 NZ_KK316785.1 Protein Homology CDS 445104 445268 . - 0 ID=cds-WP_003400054.1;Parent=gene-AL42_RS27360;Dbxref=GenBank:WP_003400054.1;Name=WP_003400054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003400054.1;locus_tag=AL42_RS27360;product=hypothetical protein;protein_id=WP_003400054.1;transl_table=11 NZ_KK316785.1 RefSeq pseudogene 445292 449481 . - . ID=gene-AL42_RS26710;Name=eccC2;gbkey=Gene;gene=eccC2;gene_biotype=pseudogene;locus_tag=AL42_RS26710;pseudo=true NZ_KK316785.1 Protein Homology CDS 445292 449481 . - 0 ID=cds-AL42_RS26710;Parent=gene-AL42_RS26710;Note=frameshifted;gbkey=CDS;gene=eccC2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218411.1;locus_tag=AL42_RS26710;product=type VII secretion system ESX-2 FtsK/SpoIIIE family ATPase EccC2;pseudo=true;transl_table=11 NZ_KK316785.1 RefSeq gene 449482 450969 . - . ID=gene-AL42_RS25225;Name=eccB2;gbkey=Gene;gene=eccB2;gene_biotype=protein_coding;locus_tag=AL42_RS25225;old_locus_tag=AL42_04048 NZ_KK316785.1 Protein Homology CDS 449482 450969 . - 0 ID=cds-WP_003400065.1;Parent=gene-AL42_RS25225;Dbxref=GenBank:WP_003400065.1;Name=WP_003400065.1;gbkey=CDS;gene=eccB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218412.1;locus_tag=AL42_RS25225;product=type VII secretion system ESX-2 subunit EccB2;protein_id=WP_003400065.1;transl_table=11 NZ_KK316785.1 RefSeq gene 450972 451880 . - . ID=gene-AL42_RS25230;Name=AL42_RS25230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS25230;old_locus_tag=AL42_04049 NZ_KK316785.1 Protein Homology CDS 450972 451880 . - 0 ID=cds-WP_078449392.1;Parent=gene-AL42_RS25230;Dbxref=GenBank:WP_078449392.1;Name=WP_078449392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218413.1;locus_tag=AL42_RS25230;product=transglycosylase SLT domain-containing protein;protein_id=WP_078449392.1;transl_table=11 NZ_KK316785.1 RefSeq pseudogene 452690 453019 . - . ID=gene-AL42_RS27815;Name=AL42_RS27815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS27815;old_locus_tag=AL42_04051;partial=true;pseudo=true;start_range=.,452690 NZ_KK316785.1 Protein Homology CDS 452690 453019 . - 0 ID=cds-AL42_RS27815;Parent=gene-AL42_RS27815;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218415.1;locus_tag=AL42_RS27815;partial=true;product=hypothetical protein;pseudo=true;start_range=.,452690;transl_table=11 NZ_KK316785.1 RefSeq gene 453181 454359 . - . ID=gene-AL42_RS27820;Name=AL42_RS27820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27820;old_locus_tag=AL42_04052 NZ_KK316785.1 Protein Homology CDS 453181 454359 . - 0 ID=cds-WP_003917986.1;Parent=gene-AL42_RS27820;Dbxref=GenBank:WP_003917986.1;Name=WP_003917986.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037368.6;locus_tag=AL42_RS27820;product=DUF5631 domain-containing protein;protein_id=WP_003917986.1;transl_table=11 NZ_KK316785.1 RefSeq gene 454407 455342 . - . ID=gene-AL42_RS27825;Name=AL42_RS27825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27825;old_locus_tag=AL42_04053 NZ_KK316785.1 Protein Homology CDS 454407 455342 . - 0 ID=cds-WP_003899756.1;Parent=gene-AL42_RS27825;Dbxref=GenBank:WP_003899756.1;Name=WP_003899756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218417.1;locus_tag=AL42_RS27825;product=hypothetical protein;protein_id=WP_003899756.1;transl_table=11 NZ_KK316785.1 RefSeq gene 455399 455848 . - . ID=gene-AL42_RS25245;Name=AL42_RS25245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS25245;old_locus_tag=AL42_04054 NZ_KK316785.1 Protein Homology CDS 455399 455848 . - 0 ID=cds-WP_003400081.1;Parent=gene-AL42_RS25245;Dbxref=GenBank:WP_003400081.1;Name=WP_003400081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218418.1;locus_tag=AL42_RS25245;product=hypothetical protein;protein_id=WP_003400081.1;transl_table=11 NZ_KK316785.1 RefSeq gene 455836 456021 . + . ID=gene-AL42_RS27070;Name=AL42_RS27070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27070 NZ_KK316785.1 Protein Homology CDS 455836 456021 . + 0 ID=cds-WP_003899758.1;Parent=gene-AL42_RS27070;Dbxref=GenBank:WP_003899758.1;Name=WP_003899758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003899758.1;locus_tag=AL42_RS27070;product=hypothetical protein;protein_id=WP_003899758.1;transl_table=11 NZ_KK316785.1 RefSeq gene 456399 456929 . - . ID=gene-AL42_RS25250;Name=ift;gbkey=Gene;gene=ift;gene_biotype=protein_coding;locus_tag=AL42_RS25250;old_locus_tag=AL42_04055 NZ_KK316785.1 Protein Homology CDS 456399 456929 . - 0 ID=cds-WP_003400086.1;Parent=gene-AL42_RS25250;Dbxref=GenBank:WP_003400086.1;Name=WP_003400086.1;gbkey=CDS;gene=ift;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218419.1;locus_tag=AL42_RS25250;product=necrotizing toxin immunity factor IFT;protein_id=WP_003400086.1;transl_table=11 NZ_KK316785.1 RefSeq gene 456926 459466 . - . ID=gene-AL42_RS25255;Name=cpnT;gbkey=Gene;gene=cpnT;gene_biotype=protein_coding;locus_tag=AL42_RS25255;old_locus_tag=AL42_04056 NZ_KK316785.1 Protein Homology CDS 456926 459466 . - 0 ID=cds-WP_003899759.1;Parent=gene-AL42_RS25255;Dbxref=GenBank:WP_003899759.1;Name=WP_003899759.1;gbkey=CDS;gene=cpnT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218420.1;locus_tag=AL42_RS25255;product=outer membrane channel protein/necrotizing toxin glycohydrolase CpnT;protein_id=WP_003899759.1;transl_table=11 NZ_KK316785.1 RefSeq gene 459471 459743 . - . ID=gene-AL42_RS25260;Name=esxE;gbkey=Gene;gene=esxE;gene_biotype=protein_coding;locus_tag=AL42_RS25260;old_locus_tag=AL42_04057 NZ_KK316785.1 Protein Homology CDS 459471 459743 . - 0 ID=cds-WP_003400094.1;Parent=gene-AL42_RS25260;Dbxref=GenBank:WP_003400094.1;Name=WP_003400094.1;gbkey=CDS;gene=esxE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003400094.1;locus_tag=AL42_RS25260;product=pore-forming CpnT exporter EsxE;protein_id=WP_003400094.1;transl_table=11 NZ_KK316785.1 RefSeq gene 459754 460065 . - . ID=gene-AL42_RS25265;Name=esxF;gbkey=Gene;gene=esxF;gene_biotype=protein_coding;locus_tag=AL42_RS25265;old_locus_tag=AL42_04058 NZ_KK316785.1 Protein Homology CDS 459754 460065 . - 0 ID=cds-WP_003400100.1;Parent=gene-AL42_RS25265;Dbxref=GenBank:WP_003400100.1;Name=WP_003400100.1;gbkey=CDS;gene=esxF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218422.1;locus_tag=AL42_RS25265;product=pore-forming CpnT exporter EsxF;protein_id=WP_003400100.1;transl_table=11 NZ_KK316785.1 RefSeq gene 460131 460640 . - . ID=gene-AL42_RS25270;Name=AL42_RS25270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS25270;old_locus_tag=AL42_04059 NZ_KK316785.1 Protein Homology CDS 460131 460640 . - 0 ID=cds-WP_003400109.1;Parent=gene-AL42_RS25270;Dbxref=GenBank:WP_003400109.1;Name=WP_003400109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218423.1;locus_tag=AL42_RS25270;product=hypothetical protein;protein_id=WP_003400109.1;transl_table=11 NZ_KK316785.1 RefSeq gene 460665 462107 . - . ID=gene-AL42_RS25275;Name=pcnA;gbkey=Gene;gene=pcnA;gene_biotype=protein_coding;locus_tag=AL42_RS25275;old_locus_tag=AL42_04060 NZ_KK316785.1 Protein Homology CDS 460665 462107 . - 0 ID=cds-WP_003400120.1;Parent=gene-AL42_RS25275;Dbxref=GenBank:WP_003400120.1;Name=WP_003400120.1;Ontology_term=GO:0006396,GO:0003723,GO:0016779;gbkey=CDS;gene=pcnA;go_function=RNA binding|0003723||IEA,nucleotidyltransferase activity|0016779||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178026.1;locus_tag=AL42_RS25275;product=CCA tRNA nucleotidyltransferase;protein_id=WP_003400120.1;transl_table=11 NZ_KK316785.1 RefSeq gene 462483 463229 . + . ID=gene-AL42_RS25280;Name=AL42_RS25280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS25280;old_locus_tag=AL42_04061 NZ_KK316785.1 Protein Homology CDS 462483 463229 . + 0 ID=cds-WP_003906260.1;Parent=gene-AL42_RS25280;Dbxref=GenBank:WP_003906260.1;Name=WP_003906260.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218425.1;locus_tag=AL42_RS25280;product=NUDIX hydrolase;protein_id=WP_003906260.1;transl_table=11 NZ_KK316785.1 RefSeq gene 463226 465634 . + . ID=gene-AL42_RS25285;Name=AL42_RS25285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS25285;old_locus_tag=AL42_04062 NZ_KK316785.1 Protein Homology CDS 463226 465634 . + 0 ID=cds-WP_003900781.1;Parent=gene-AL42_RS25285;Dbxref=GenBank:WP_003900781.1;Name=WP_003900781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218426.1;locus_tag=AL42_RS25285;product=DUF6049 family protein;protein_id=WP_003900781.1;transl_table=11 NZ_KK316785.1 RefSeq gene 465631 469185 . + . ID=gene-AL42_RS25290;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=AL42_RS25290;old_locus_tag=AL42_04063 NZ_KK316785.1 Protein Homology CDS 465631 469185 . + 0 ID=cds-WP_003902580.1;Parent=gene-AL42_RS25290;Dbxref=GenBank:WP_003902580.1;Name=WP_003902580.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218427.1;locus_tag=AL42_RS25290;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_003902580.1;transl_table=11 NZ_KK316785.1 RefSeq gene 469220 469810 . + . ID=gene-AL42_RS25295;Name=sigM;gbkey=Gene;gene=sigM;gene_biotype=protein_coding;locus_tag=AL42_RS25295;old_locus_tag=AL42_04064 NZ_KK316785.1 Protein Homology CDS 469220 469810 . + 0 ID=cds-WP_003400144.1;Parent=gene-AL42_RS25295;Dbxref=GenBank:WP_003400144.1;Name=WP_003400144.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=sigM;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003917992.1;locus_tag=AL42_RS25295;product=RNA polymerase sigma factor SigM;protein_id=WP_003400144.1;transl_table=11 NZ_KK316785.1 RefSeq gene 469903 470667 . + . ID=gene-AL42_RS25300;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=AL42_RS25300;old_locus_tag=AL42_04065 NZ_KK316785.1 Protein Homology CDS 469903 470667 . + 0 ID=cds-WP_003400148.1;Parent=gene-AL42_RS25300;Dbxref=GenBank:WP_003400148.1;Name=WP_003400148.1;gbkey=CDS;gene=rsmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218429.1;locus_tag=AL42_RS25300;product=anti-sigma-M factor RsmA;protein_id=WP_003400148.1;transl_table=11 NZ_KK316785.1 RefSeq gene 470761 471768 . + . ID=gene-AL42_RS25305;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=AL42_RS25305;old_locus_tag=AL42_04066 NZ_KK316785.1 Protein Homology CDS 470761 471768 . + 0 ID=cds-WP_003900782.1;Parent=gene-AL42_RS25305;Dbxref=GenBank:WP_003900782.1;Name=WP_003900782.1;Ontology_term=GO:0019430,GO:0004791,GO:0071949,GO:0005737;gbkey=CDS;gene=trxB;go_component=cytoplasm|0005737||IEA;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA,FAD binding|0071949||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218430.1;locus_tag=AL42_RS25305;product=thioredoxin-disulfide reductase;protein_id=WP_003900782.1;transl_table=11 NZ_KK316785.1 RefSeq gene 471765 472115 . + . ID=gene-AL42_RS25310;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=AL42_RS25310;old_locus_tag=AL42_04067 NZ_KK316785.1 Protein Homology CDS 471765 472115 . + 0 ID=cds-WP_003400164.1;Parent=gene-AL42_RS25310;Dbxref=GenBank:WP_003400164.1;Name=WP_003400164.1;Ontology_term=GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218431.1;locus_tag=AL42_RS25310;product=thioredoxin;protein_id=WP_003400164.1;transl_table=11 NZ_KK316785.1 RefSeq gene 472225 473445 . + . ID=gene-AL42_RS25315;Name=cwlM;gbkey=Gene;gene=cwlM;gene_biotype=protein_coding;locus_tag=AL42_RS25315;old_locus_tag=AL42_04068 NZ_KK316785.1 Protein Homology CDS 472225 473445 . + 0 ID=cds-WP_003400168.1;Parent=gene-AL42_RS25315;Dbxref=GenBank:WP_003400168.1;Name=WP_003400168.1;gbkey=CDS;gene=cwlM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_178027.1;locus_tag=AL42_RS25315;product=N-acetylmuramoyl-L-alanine amidase CwlM;protein_id=WP_003400168.1;transl_table=11 NZ_KK316785.1 RefSeq gene 473466 474200 . - . ID=gene-AL42_RS25320;Name=AL42_RS25320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS25320;old_locus_tag=AL42_04069 NZ_KK316785.1 Protein Homology CDS 473466 474200 . - 0 ID=cds-WP_003400171.1;Parent=gene-AL42_RS25320;Dbxref=GenBank:WP_003400171.1;Name=WP_003400171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218433.1;locus_tag=AL42_RS25320;product=hypothetical protein;protein_id=WP_003400171.1;transl_table=11 NZ_KK316785.1 RefSeq gene 474490 475524 . - . ID=gene-AL42_RS25325;Name=parB;gbkey=Gene;gene=parB;gene_biotype=protein_coding;locus_tag=AL42_RS25325;old_locus_tag=AL42_04070 NZ_KK316785.1 Protein Homology CDS 474490 475524 . - 0 ID=cds-WP_003400175.1;Parent=gene-AL42_RS25325;Dbxref=GenBank:WP_003400175.1;Name=WP_003400175.1;Ontology_term=GO:0003677;gbkey=CDS;gene=parB;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218435.2;locus_tag=AL42_RS25325;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_003400175.1;transl_table=11 NZ_KK316785.1 RefSeq gene 475521 476564 . - . ID=gene-AL42_RS25330;Name=parA;gbkey=Gene;gene=parA;gene_biotype=protein_coding;locus_tag=AL42_RS25330;old_locus_tag=AL42_04071 NZ_KK316785.1 Protein Homology CDS 475521 476564 . - 0 ID=cds-WP_003400180.1;Parent=gene-AL42_RS25330;Dbxref=GenBank:WP_003400180.1;Name=WP_003400180.1;gbkey=CDS;gene=parA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218434.2;locus_tag=AL42_RS25330;product=chromosome partitioning protein ParA;protein_id=WP_003400180.1;transl_table=11 NZ_KK316785.1 RefSeq gene 476561 477235 . - . ID=gene-AL42_RS25335;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=AL42_RS25335;old_locus_tag=AL42_04072 NZ_KK316785.1 Protein Homology CDS 476561 477235 . - 0 ID=cds-WP_003902583.1;Parent=gene-AL42_RS25335;Dbxref=GenBank:WP_003902583.1;Name=WP_003902583.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218436.2;locus_tag=AL42_RS25335;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_003902583.1;transl_table=11 NZ_KK316785.1 RefSeq gene 477367 477930 . - . ID=gene-AL42_RS25340;Name=AL42_RS25340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS25340;old_locus_tag=AL42_04073 NZ_KK316785.1 Protein Homology CDS 477367 477930 . - 0 ID=cds-WP_003899764.1;Parent=gene-AL42_RS25340;Dbxref=GenBank:WP_003899764.1;Name=WP_003899764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218437.1;locus_tag=AL42_RS25340;product=Jag family protein;protein_id=WP_003899764.1;transl_table=11 NZ_KK316785.1 RefSeq gene 478002 479102 . - . ID=gene-AL42_RS25345;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=AL42_RS25345;old_locus_tag=AL42_04074 NZ_KK316785.1 Protein Homology CDS 478002 479102 . - 0 ID=cds-WP_003899765.1;Parent=gene-AL42_RS25345;Dbxref=GenBank:WP_003899765.1;Name=WP_003899765.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218438.1;locus_tag=AL42_RS25345;product=membrane protein insertase YidC;protein_id=WP_003899765.1;transl_table=11 NZ_KK316785.1 RefSeq gene 479086 479448 . - . ID=gene-AL42_RS25350;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=AL42_RS25350;old_locus_tag=AL42_04075 NZ_KK316785.1 Protein Homology CDS 479086 479448 . - 0 ID=cds-WP_003899766.1;Parent=gene-AL42_RS25350;Dbxref=GenBank:WP_003899766.1;Name=WP_003899766.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_218439.1;locus_tag=AL42_RS25350;product=membrane protein insertion efficiency factor YidD;protein_id=WP_003899766.1;transl_table=11 NZ_KK316785.1 RefSeq gene 479445 479795 . - . ID=gene-AL42_RS25355;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=AL42_RS25355;old_locus_tag=AL42_04076 NZ_KK316785.1 Protein Homology CDS 479445 479795 . - 0 ID=cds-WP_003899767.1;Parent=gene-AL42_RS25355;Dbxref=GenBank:WP_003899767.1;Name=WP_003899767.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010950319.1;locus_tag=AL42_RS25355;product=ribonuclease P protein component;protein_id=WP_003899767.1;transl_table=11 NZ_KK316785.1 RefSeq gene 479819 479962 . - . ID=gene-AL42_RS25360;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=AL42_RS25360;old_locus_tag=AL42_04077 NZ_KK316785.1 Protein Homology CDS 479819 479962 . - 0 ID=cds-WP_003400206.1;Parent=gene-AL42_RS25360;Dbxref=GenBank:WP_003400206.1;Name=WP_003400206.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005263481.1;locus_tag=AL42_RS25360;product=50S ribosomal protein L34;protein_id=WP_003400206.1;transl_table=11 ##sequence-region NZ_KK316786.1 1 1832 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1448421 NZ_KK316786.1 RefSeq region 1 1832 . + . ID=NZ_KK316786.1:1..1832;Dbxref=taxon:1448421;collection-date=2013-04-02;country=South Africa: Durban Chest Clinic;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Homo sapiens;strain=TKK_03_0083 NZ_KK316786.1 RefSeq gene 1 77 . - . ID=gene-AL42_RS27075;Name=AL42_RS27075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS27075;partial=true;start_range=.,1 NZ_KK316786.1 Protein Homology CDS 1 77 . - 0 ID=cds-WP_044798163.1;Parent=gene-AL42_RS27075;Dbxref=GenBank:WP_044798163.1;Name=WP_044798163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_177937.1;locus_tag=AL42_RS27075;partial=true;product=PPE domain-containing protein;protein_id=WP_044798163.1;start_range=.,1;transl_table=11 NZ_KK316786.1 RefSeq gene 325 1832 . - . ID=gene-AL42_RS25365;Name=AL42_RS25365;end_range=1832,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS25365;old_locus_tag=AL42_04078;partial=true NZ_KK316786.1 Protein Homology CDS 325 1832 . - 2 ID=cds-WP_031647990.1;Parent=gene-AL42_RS25365;Dbxref=GenBank:WP_031647990.1;Name=WP_031647990.1;end_range=1832,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015288465.1;locus_tag=AL42_RS25365;partial=true;product=beta strand repeat-containing protein;protein_id=WP_031647990.1;transl_table=11 ##sequence-region NZ_KK316787.1 1 1166 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1448421 NZ_KK316787.1 RefSeq region 1 1166 . + . ID=NZ_KK316787.1:1..1166;Dbxref=taxon:1448421;collection-date=2013-04-02;country=South Africa: Durban Chest Clinic;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Homo sapiens;strain=TKK_03_0083 NZ_KK316787.1 RefSeq gene 1 917 . - . ID=gene-AL42_RS25370;Name=AL42_RS25370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AL42_RS25370;old_locus_tag=AL42_04079;partial=true;start_range=.,1 NZ_KK316787.1 Protein Homology CDS 1 917 . - 0 ID=cds-WP_031647459.1;Parent=gene-AL42_RS25370;Dbxref=GenBank:WP_031647459.1;Name=WP_031647459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009975725.1;locus_tag=AL42_RS25370;partial=true;product=HAMP domain-containing protein;protein_id=WP_031647459.1;start_range=.,1;transl_table=11 NZ_KK316787.1 RefSeq pseudogene 924 1166 . - . ID=gene-AL42_RS26730;Name=AL42_RS26730;end_range=1166,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AL42_RS26730;old_locus_tag=AL42_04080;partial=true;pseudo=true NZ_KK316787.1 Protein Homology CDS 924 1166 . - 0 ID=cds-AL42_RS26730;Parent=gene-AL42_RS26730;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1166,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003900315.1;locus_tag=AL42_RS26730;partial=true;product=adenylate/guanylate cyclase domain-containing protein;pseudo=true;transl_table=11 ###